BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009663
(529 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/534 (71%), Positives = 451/534 (84%), Gaps = 10/534 (1%)
Query: 1 MVSVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS 60
M NQLN LN VLA+LERC H+NHLKQLQ+FL TLG +QT+FYAFKL+RFCTL LS
Sbjct: 45 MAPPQNQLN--LNNSVLALLERCIHLNHLKQLQAFLITLGHAQTHFYAFKLLRFCTLALS 102
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
NL+YARFIFDH+ +PN YLYTAMITAYAS H +SA LYR+MVRR +P PN FIYPHV
Sbjct: 103 NLSYARFIFDHVESPNVYLYTAMITAYASHSDH-TSALLLYRNMVRRRRPWPNHFIYPHV 161
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
LKSC V+ +MVH Q+++SGFEQYPVV+TAL+++Y R +D+ AR LFDEM++RN
Sbjct: 162 LKSCTQVVGPGSARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERN 221
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM-- 238
VVSWTAMISGYTR+G I NA LF+ MP+RDVP+WN++IAG TQNGLF +A+S FRRM
Sbjct: 222 VVSWTAMISGYTRLGQIGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIA 281
Query: 239 ---GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
G N RPNQVT VC+LSA GHTGML+LGK IHGYVYRNGL LDSF+SNAL+DMY
Sbjct: 282 VEAGAWGQGN-RPNQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMY 340
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
GKCG LKEARR FDR ++ LTSWNSMIN ALHGQS+N+I VFEEMM C ++PD V
Sbjct: 341 GKCGCLKEARRVFDRTLERSLTSWNSMINCLALHGQSQNAISVFEEMMTCGS-GVKPDEV 399
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TFI LLNACTHGGLVE+G YF+LMT+ Y IEPQIEHYGCLVDLLGRAG+FEEA+EVV+G
Sbjct: 400 TFIGLLNACTHGGLVEKGWLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRG 459
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M+IEPDEV+WGSLLNGCKI+G TD AEF++KKLI++DPNNGGYGIMLANIYGELGKWDEV
Sbjct: 460 MRIEPDEVIWGSLLNGCKIHGHTDLAEFSIKKLIDMDPNNGGYGIMLANIYGELGKWDEV 519
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVALH 529
RKVRK+LK++NA+KTPGCSWIE+D QVHQF+S+DKTHPRTEEIY+ LES+++L+
Sbjct: 520 RKVRKVLKEQNAHKTPGCSWIEIDNQVHQFYSVDKTHPRTEEIYNTLESLISLY 573
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/523 (66%), Positives = 425/523 (81%), Gaps = 8/523 (1%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
LNQ +A LE+C+++NHLKQLQ FL + G SQT F+AFKLVRFC L L++L YAR+IFD+
Sbjct: 42 LNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDN 101
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
LT+PN +LYTAMITAYAS P +AF LYR+MVRRG +PN FIYPHVL+SCPDVL S
Sbjct: 102 LTSPNVFLYTAMITAYASYP-DPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSN 160
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
TKMVHTQ++KSGF YPVV+TA+V+SYSR +DIG AR++FDEM +R VVSWTAMISGY
Sbjct: 161 ATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISGY 220
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM---GMEVSDNIR- 247
R+G+ +A LF+SMP+RDVPAWN++IAGC QNG F +AI F+RM +E ++N R
Sbjct: 221 ARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLALEGNNNDRE 280
Query: 248 --PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
PN+ TL ALSA GHTGML LGK IHGYV++ DSFISNAL+DMYGKCG+LK AR
Sbjct: 281 NKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVAR 340
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
R FD + K LTSWNS+IN ALHG S ++I +F E++ C D ++P+ VTF+ +LNACT
Sbjct: 341 RVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGD-GVKPNEVTFVGVLNACT 399
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
HGGLVE+G +YF++M + Y IEPQIEH+GCL+DLLGRAGRFEEA+EVV+GM IEPDEVVW
Sbjct: 400 HGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVW 459
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
GSLLN CKI+GR+D AE++VKKLIE+DP NGGY IMLANIY E GKWDEVRKVR++LK++
Sbjct: 460 GSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEK 519
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
NAYKTPGCSWIEVD QV+QF+S D +HP EEIY LESM++
Sbjct: 520 NAYKTPGCSWIEVDNQVYQFYSFDMSHPSVEEIYKTLESMISF 562
>gi|356561772|ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/521 (65%), Positives = 423/521 (81%), Gaps = 7/521 (1%)
Query: 8 LNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARF 67
+ LN+ VL L + NH+NHLKQLQ++LTTLG + T+FYAFKL+RFCTL LSNLTYAR
Sbjct: 1 MKPNLNEHVLDTLSKSNHLNHLKQLQAYLTTLGHAHTHFYAFKLIRFCTLTLSNLTYARL 60
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
IFDH+ + NT+L+TAMITAYA+ PA SA SL+R M+R P+PN FI+PH LK+CP
Sbjct: 61 IFDHIPSLNTHLFTAMITAYAAHPATHPSALSLFRHMLRSQPPRPNHFIFPHALKTCP-- 118
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
ES + +H QIVKSGF +YPVV+TALV+SYS+ +G A+K+FDEMSDR+VVS+TAM
Sbjct: 119 -ESCAAESLHAQIVKSGFHEYPVVQTALVDSYSKVSGGLGNAKKVFDEMSDRSVVSFTAM 177
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
+SG+ RVGD+++A +F M DRDVP+WN++IAGCTQNG F+ I FRRM E + R
Sbjct: 178 VSGFARVGDVESAVRVFGEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRMVFECN---R 234
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
PN VT+VCALSA GH GMLQLG+ IHGYVY+NGL DSF+ NAL+DMYGKCGSL +AR+
Sbjct: 235 PNGVTVVCALSACGHMGMLQLGRWIHGYVYKNGLAFDSFVLNALVDMYGKCGSLGKARKV 294
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F+ N +K LTSWNSMIN FALHGQS+++I +FE+M+ +RPD VTF+ LLNACTHG
Sbjct: 295 FEMNPEKGLTSWNSMINCFALHGQSDSAIAIFEQMVEGGG-GVRPDEVTFVGLLNACTHG 353
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GLVE+G YF++M + Y IEPQIEHYGCL+DLLGRAGRF+EA++VVKGM +EPDEVVWGS
Sbjct: 354 GLVEKGYWYFEMMVQEYGIEPQIEHYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVWGS 413
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LLNGCK++GRTD AEFA KKLIEIDP+NGGY IMLAN+YGELGKWDEVR V + LK + +
Sbjct: 414 LLNGCKVHGRTDLAEFAAKKLIEIDPHNGGYRIMLANVYGELGKWDEVRNVWRTLKQQKS 473
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
YK PGCSWIEVD QVHQF+SLDK++P+TE++Y LES+V
Sbjct: 474 YKVPGCSWIEVDDQVHQFYSLDKSNPKTEDLYIVLESLVGF 514
>gi|15217517|ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g33350
gi|12322383|gb|AAG51215.1|AC051630_12 unknown protein; 15445-13829 [Arabidopsis thaliana]
gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193465|gb|AEE31586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 538
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/520 (60%), Positives = 403/520 (77%), Gaps = 3/520 (0%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
Q LNQ + A++ + H+NHLKQ+QSF+ G S ++F FKL+RFCTL+L NL+YARFIF
Sbjct: 21 QLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIF 80
Query: 70 DHLTTPNTYLYTAMITAYASQ-PAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
D + PNT+LY A++TAY+S P HASSAFS +R MV R P+PN FIYP VLKS P +
Sbjct: 81 DRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLS 140
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ T +VHT + KSGF Y VV+TAL++SY+ S + I +AR+LFDEMS+RNVVSWTAM+
Sbjct: 141 SAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAML 200
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
SGY R GDI NA +LF+ MP+RDVP+WN+++A CTQNGLF +A+S FRRM E S IRP
Sbjct: 201 SGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPS--IRP 258
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
N+VT+VC LSA TG LQL K IH + YR L D F+SN+L+D+YGKCG+L+EA F
Sbjct: 259 NEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVF 318
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
SKK LT+WNSMIN FALHG+SE +I VFEEMM+ ++I+PD +TFI LLNACTHGG
Sbjct: 319 KMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGG 378
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
LV +GR YF LMT + IEP+IEHYGCL+DLLGRAGRF+EALEV+ MK++ DE +WGSL
Sbjct: 379 LVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSL 438
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
LN CKI+G D AE AVK L+ ++PNNGGY M+AN+YGE+G W+E R+ RKM+K +NAY
Sbjct: 439 LNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAY 498
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
K PG S IE+D +VHQF+SLDK+HP TEEIY L+S+++
Sbjct: 499 KPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLISF 538
>gi|357498595|ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
gi|355494601|gb|AES75804.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
Length = 528
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/525 (61%), Positives = 404/525 (76%), Gaps = 15/525 (2%)
Query: 8 LNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARF 67
+ + LN+ V IL + NH+N LKQLQS LTTLG SQT+FYAFKL+RFC+L LSNL YA
Sbjct: 1 MKRNLNELVTTILTKINHLNQLKQLQSHLTTLGHSQTHFYAFKLIRFCSLNLSNLHYAHQ 60
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
IF+H+ +PN YL+TA+ITA++SQ + F L++ M+ +PN FIYPHVLKS V
Sbjct: 61 IFNHIHSPNIYLFTAIITAFSSQ---QHTTFKLFKTMLNS-NIRPNNFIYPHVLKS---V 113
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
E +VH QIVK GF YPVVET+LV+SYS+ + A K+FDEMS+RN+V +T +
Sbjct: 114 KERFLVDLVHAQIVKCGFLNYPVVETSLVDSYSKVLGGLRDAHKVFDEMSERNIVVFTVL 173
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS---- 243
+SGY RVGD++ +FD M DRDVPAWN+VI+GCTQNG FS+ I FR M
Sbjct: 174 VSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEG 233
Query: 244 ---DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+PNQVT+VC LSA GH GMLQLGK IHGYVYR+G +DSF+SNAL+DMYGKCGS
Sbjct: 234 GFCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCGS 293
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
L+ AR+ F+ + +K LTSWNSMIN +ALHG+ E++I FE+M+ C +RPD VTFI L
Sbjct: 294 LELARKVFEMDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVECGG-GVRPDEVTFIGL 352
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
LNACTHGGLVEQG YF++M K Y IEPQI HYGCL+DLLGRAG+F+EA++VVKGM +EP
Sbjct: 353 LNACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEP 412
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
DEVVWGSLLNGCK++GRTD AEFA KKL+EIDP+NGGYG MLANIYG+LGKWDE+R V
Sbjct: 413 DEVVWGSLLNGCKVHGRTDLAEFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWS 472
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
LK + +YK PGCSWIEVD +VHQF SLD+++P+TEE+Y+ LES+
Sbjct: 473 KLKQQKSYKIPGCSWIEVDDKVHQFFSLDQSNPKTEELYNILESL 517
>gi|297846320|ref|XP_002891041.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336883|gb|EFH67300.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 586
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 297/495 (60%), Positives = 379/495 (76%), Gaps = 5/495 (1%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
+ +NQ + A + + H+NHLKQ+QSFL G S ++F FKL+RFCTL+L NL+YARFIF
Sbjct: 21 ELVNQFISAAISKSRHLNHLKQVQSFLIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIF 80
Query: 70 DHLTTPNTYLYTAMITAYASQ-PAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
D + PNT+LY A++T Y+S P HASSAFS +R MV R P+PN FIYP VLKS P +
Sbjct: 81 DRFSFPNTHLYAAVLTGYSSSLPLHASSAFSFFRLMVNRSFPRPNHFIYPLVLKSTPYLS 140
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ T +VHT + KSGF Y VV+TAL++SY+ S + I +AR+LFDEMS+RNVVSWTAM+
Sbjct: 141 SAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAML 200
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN-IR 247
SGY R GDI NA +LF+ MP+RDVP+WN+++A CTQNGLF +A+S FRRM ++D IR
Sbjct: 201 SGYARSGDIFNAVALFEEMPERDVPSWNAILAACTQNGLFVEAVSLFRRM---INDPCIR 257
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
PN+VTLVC LSA TG LQL K IH + YR L D F+SN+L+D+YGKCG+L+EA
Sbjct: 258 PNEVTLVCVLSACAQTGTLQLAKGIHAFAYRRNLSSDVFVSNSLVDLYGKCGNLEEASSV 317
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F +SKK LT+WNSMIN FALHG+SE +I VFE+MM+ H+I+PD +TFI LLNACTHG
Sbjct: 318 FKMSSKKSLTAWNSMINCFALHGRSEEAIAVFEDMMKLNSHDIKPDHITFIGLLNACTHG 377
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GLV +GR YF LM K + IEP+IEHYGCL+DLLGRAG+F+EALE + MK+E DE +WGS
Sbjct: 378 GLVSKGRGYFDLMKKRFGIEPRIEHYGCLIDLLGRAGQFDEALETMSTMKMEADEAIWGS 437
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LLN CK YG D AE AVK L+ ++PNNGGY M+AN+YGE+G W+E R+ RKM+K +NA
Sbjct: 438 LLNACKKYGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNA 497
Query: 488 YKTPGCSWIEVDKQV 502
YK PG S IE+D ++
Sbjct: 498 YKPPGWSQIEIDNKL 512
>gi|357150199|ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Brachypodium distachyon]
Length = 523
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/515 (51%), Positives = 362/515 (70%), Gaps = 12/515 (2%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPN 76
+A+L RC + HLKQL ++ + F+L+RF +L+LS L YAR +FD PN
Sbjct: 13 VAVLSRCATLAHLKQLHGRSVVTARAASQSTTFQLLRFASLRLSCLPYARRLFDSTPHPN 72
Query: 77 TYLYTAMITAYASQPAH---ASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
+LY+AM++AYA+ A +L+ M+RRG+P PNQF+YP VL++ + +
Sbjct: 73 VFLYSAMLSAYAAASPAQAYGHDALALFLRMLRRGRPAPNQFVYPLVLRAAC-AIGVQLV 131
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+ +H+ KSGF Y V+ T+L++ YSR G + ARKLFD +++RNV+SWTA++SGY R
Sbjct: 132 RSIHSHACKSGFHAYDVIRTSLLDGYSRYGMMLD-ARKLFDGLTERNVISWTALVSGYAR 190
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
G I +A LFD MP+RDV AWN++I GCTQNGLF +A+ RM V + + N T+
Sbjct: 191 AGKIGDAIVLFDRMPERDVAAWNAMITGCTQNGLFVEAVGICSRM---VDEGFQLNGTTV 247
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
C LSA GH GML++GKV+HGY +R+ + S + N LIDMYGKCG+LKEAR FD S
Sbjct: 248 SCVLSACGHLGMLKIGKVVHGYAWRSCVGFGSSVVNGLIDMYGKCGNLKEARWMFDEFSD 307
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ LT+WNS+IN ALHG S+++I VF+EM +D I PD VTF+ LLNACTHGG V++G
Sbjct: 308 RSLTTWNSLINCLALHGHSKSAIAVFDEM---RDEGIEPDVVTFVGLLNACTHGGFVDEG 364
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
YFKLM RIEP+IEHYGC+VDLLGRAGRFE+A+ V+ MK++PDEV+WGSLLN C+
Sbjct: 365 LTYFKLMCDELRIEPEIEHYGCIVDLLGRAGRFEDAMNVINDMKVQPDEVIWGSLLNACR 424
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK-DRNAYKTPG 492
+ + + AEF+V+KL++++PNN Y +MLAN+Y E G W+EV K+RK++K D K PG
Sbjct: 425 THRQLELAEFSVRKLLQLNPNNANYVVMLANLYSEGGSWEEVTKIRKLMKEDIMGKKLPG 484
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
CSWIEVD++ H+F+S D HP +E+IYD L+ + A
Sbjct: 485 CSWIEVDRKTHRFYSGDDAHPESEDIYDTLDELAA 519
>gi|222623259|gb|EEE57391.1| hypothetical protein OsJ_07563 [Oryza sativa Japonica Group]
Length = 748
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 259/515 (50%), Positives = 360/515 (69%), Gaps = 13/515 (2%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPN 76
+A L RC + HLKQL + G++ F L+RF +L+LS L YAR +FD +PN
Sbjct: 232 VAALHRCATLAHLKQLHAHAVVTGRAAAQTTTFHLLRFASLRLSCLPYARRLFDATPSPN 291
Query: 77 TYLYTAMITAYASQPA----HASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
+LY+AM++AYA+ + HA + +L+ M+RRG+P PNQF+YP VL++ + +
Sbjct: 292 VFLYSAMLSAYAAASSHSQEHARDSLALFLRMLRRGRPAPNQFVYPLVLRAAC-AIGVQL 350
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+ +H K GF + + T+L++ YSR G +G ARKLFD ++DRNVVSWTA++SGY
Sbjct: 351 VRSIHCHACKDGFYGHDFIRTSLLDGYSRYGM-MGDARKLFDGLTDRNVVSWTALVSGYA 409
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
R G + +A LF+ MP RDVPAWN++IAGCTQNGLF +A+ FRRM V + RPN T
Sbjct: 410 RAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRM---VDEGFRPNGTT 466
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
+ C LSA GH GML++GKVIHGY +R+ + S + N LIDMYGKCG+L EA+ FD S
Sbjct: 467 VSCLLSACGHLGMLKIGKVIHGYAWRSCVGFGSSVVNGLIDMYGKCGNLMEAKWIFDAFS 526
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+ LT+WNS+IN ALHG SE++I VF M ++ ++PD VTF+ LLNACTHGG V++
Sbjct: 527 DRGLTTWNSLINCLALHGCSESAIAVFNSM---RNEGVQPDEVTFVGLLNACTHGGFVDE 583
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G YF+LM + IEP+IEHYGC+VDLL RAGRF++A+ + MK++PDEV+WGSLLN C
Sbjct: 584 GLRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDEVIWGSLLNAC 643
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK-DRNAYKTP 491
+I+ + AE A++ L++++P+N Y +MLAN+Y E G W+EVRKVRK++K D K P
Sbjct: 644 RIHRHLELAEHAIRNLLDLNPSNANYVVMLANLYSEGGFWEEVRKVRKLMKEDVTGKKLP 703
Query: 492 GCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
GCSWIEVD++ +F+S D HP +E+IYD L+ +
Sbjct: 704 GCSWIEVDRKTRRFYSGDDGHPESEDIYDTLDKLA 738
>gi|115447355|ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group]
gi|47847758|dbj|BAD21535.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|47847799|dbj|BAD21575.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536988|dbj|BAF09371.1| Os02g0620800 [Oryza sativa Japonica Group]
Length = 530
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 259/515 (50%), Positives = 360/515 (69%), Gaps = 13/515 (2%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPN 76
+A L RC + HLKQL + G++ F L+RF +L+LS L YAR +FD +PN
Sbjct: 14 VAALHRCATLAHLKQLHAHAVVTGRAAAQTTTFHLLRFASLRLSCLPYARRLFDATPSPN 73
Query: 77 TYLYTAMITAYASQPA----HASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
+LY+AM++AYA+ + HA + +L+ M+RRG+P PNQF+YP VL++ + +
Sbjct: 74 VFLYSAMLSAYAAASSHSQEHARDSLALFLRMLRRGRPAPNQFVYPLVLRAAC-AIGVQL 132
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+ +H K GF + + T+L++ YSR G +G ARKLFD ++DRNVVSWTA++SGY
Sbjct: 133 VRSIHCHACKDGFYGHDFIRTSLLDGYSRYGM-MGDARKLFDGLTDRNVVSWTALVSGYA 191
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
R G + +A LF+ MP RDVPAWN++IAGCTQNGLF +A+ FRRM V + RPN T
Sbjct: 192 RAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRM---VDEGFRPNGTT 248
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
+ C LSA GH GML++GKVIHGY +R+ + S + N LIDMYGKCG+L EA+ FD S
Sbjct: 249 VSCLLSACGHLGMLKIGKVIHGYAWRSCVGFGSSVVNGLIDMYGKCGNLMEAKWIFDAFS 308
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+ LT+WNS+IN ALHG SE++I VF M ++ ++PD VTF+ LLNACTHGG V++
Sbjct: 309 DRGLTTWNSLINCLALHGCSESAIAVFNSM---RNEGVQPDEVTFVGLLNACTHGGFVDE 365
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G YF+LM + IEP+IEHYGC+VDLL RAGRF++A+ + MK++PDEV+WGSLLN C
Sbjct: 366 GLRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDEVIWGSLLNAC 425
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK-DRNAYKTP 491
+I+ + AE A++ L++++P+N Y +MLAN+Y E G W+EVRKVRK++K D K P
Sbjct: 426 RIHRHLELAEHAIRNLLDLNPSNANYVVMLANLYSEGGFWEEVRKVRKLMKEDVTGKKLP 485
Query: 492 GCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
GCSWIEVD++ +F+S D HP +E+IYD L+ +
Sbjct: 486 GCSWIEVDRKTRRFYSGDDGHPESEDIYDTLDKLA 520
>gi|242065790|ref|XP_002454184.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
gi|241934015|gb|EES07160.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
Length = 530
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 262/529 (49%), Positives = 359/529 (67%), Gaps = 19/529 (3%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
Q ++ +A+L RC+ HL+QL + G++ F L+RF +LS LTYAR +F
Sbjct: 6 QLSHRDFVAVLSRCSTRAHLEQLHAHAFVAGRAAAQTTTFHLIRFAAFRLSCLTYARHLF 65
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFS----------LYRDMVRRGQPQPNQFIYPH 119
D P+ +LY+A+++AY S A ASS L+ M+R G+P PNQF+YP
Sbjct: 66 DATPHPSVFLYSAILSAYVSAAATASSYAHAHAHARDALALFLRMLRHGRPAPNQFVYPL 125
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
VL++ V K +H+ KSGF + ++ T++++ YSR G + ARKLFD +++R
Sbjct: 126 VLRAASGVGVGI-VKSIHSHACKSGFCGHDIIRTSVLDGYSRHGM-MADARKLFDGLTER 183
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
NVVSWTA++SGY R G + +A LF+ MP+RDV AWN++IAGC+QNGLF +A+ F RM
Sbjct: 184 NVVSWTALVSGYARAGKVGDAIVLFERMPERDVAAWNAIIAGCSQNGLFVEAVGIFGRM- 242
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
V RPN T+ C LSA GH GML++GK+IH Y +R + S + N LIDMYGKCG
Sbjct: 243 --VGAGFRPNATTVSCVLSACGHLGMLKIGKLIHCYAWRTCVGFGSSVLNGLIDMYGKCG 300
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
+L+ AR FD S + LT+WNS+IN ALHG S+ +I VF EM + + PD VTF+
Sbjct: 301 NLEGARWIFDEVSDRSLTTWNSLINCLALHGHSKCAISVFNEM---RGEGVEPDVVTFVG 357
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
LLNACTHGG V++G YF+LM + IEP+IEHYGC++DLLGRAGRF++AL V+ M+IE
Sbjct: 358 LLNACTHGGFVDEGIRYFELMQHEHGIEPEIEHYGCIIDLLGRAGRFQDALNVISDMRIE 417
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVR 479
DEV+WGSLLN C+++ + +FAE A++KL+E+DPNN Y +MLAN+Y E G W+EVRKVR
Sbjct: 418 ADEVMWGSLLNACRVHRQVEFAELAIRKLLELDPNNANYVVMLANVYSEGGLWEEVRKVR 477
Query: 480 KMLKDRN-AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
K +K+ N K PGCSWIEVD++ H+F+S D HP +E IYD LE + A
Sbjct: 478 KFVKEENIGKKLPGCSWIEVDRKTHRFYSGDDAHPESENIYDTLEDLAA 526
>gi|413937828|gb|AFW72379.1| hypothetical protein ZEAMMB73_412000 [Zea mays]
Length = 471
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 234/473 (49%), Positives = 325/473 (68%), Gaps = 19/473 (4%)
Query: 66 RFIFDHLTTPNTYLYTAMITAYASQPAHAS--------SAFSLYRDMVRRGQPQPNQFIY 117
R +FD PN +LY+A+++AYAS A AS A +L+ M+R G+P PNQF+Y
Sbjct: 3 RHLFDATPHPNVFLYSAILSAYASAAAAASPSSYAHARDALALFLRMLRHGRPSPNQFVY 62
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGF--EQYPVVETALVNSYSRSGNDIGIARKLFDE 175
P VL++ V + R + +H+ KSGF +Y V+ T+L++ YSR + ARKLFD
Sbjct: 63 PLVLRAACAV-DVRIVRSIHSHACKSGFCGYEYDVIRTSLLDCYSRHAM-MADARKLFDG 120
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
+++R+VVSWTA++SGY R G I +A LF+ M +RDV AWN++I GC+QN LF++A+ F
Sbjct: 121 LTERSVVSWTALVSGYARAGKIGDAIMLFERMTERDVAAWNAIITGCSQNRLFAEAVGIF 180
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
RM V +RPN T+ C LSA GH GML++GK+IH +R + S + N LIDMY
Sbjct: 181 GRM---VGTGLRPNATTISCVLSACGHLGMLKIGKLIHCCAWRTCVGFGSSVLNGLIDMY 237
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
GKCG+L+ A F S + LT+WNS+IN ALHG S+ +I VF EM + + PD +
Sbjct: 238 GKCGNLEGATWIFYEVSDRSLTAWNSLINCLALHGHSKCAISVFNEM---RGEGVEPDVI 294
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF+ LLNACTHGG V++G YF+LM + IEP+IEHYGC+++LLGRAGRF++AL V+
Sbjct: 295 TFVGLLNACTHGGFVDEGIKYFELMQHEHGIEPEIEHYGCIINLLGRAGRFQDALNVISN 354
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M+IE DEV+WGSLLN C+++ + AE A++KL+E+DPNN Y +MLAN+Y E G W+EV
Sbjct: 355 MRIESDEVIWGSLLNACRVHRNVELAELAIRKLLELDPNNANYVVMLANVYSEGGLWEEV 414
Query: 476 RKVRKMLKDRN-AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
RK RK +++ N K PGCSWIEVD+++H+F+S D H +E IYD LE + A
Sbjct: 415 RKARKFMEEENIGKKLPGCSWIEVDRKIHRFYSGDDAHSESENIYDTLEDLAA 467
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/507 (38%), Positives = 316/507 (62%), Gaps = 9/507 (1%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPN 76
+ L+R N K++ + + G SQ++F K+V C KL ++ YA +F+ ++ PN
Sbjct: 14 IPFLQRVKSRNEWKKIHACIIVHGLSQSSFMVTKMVDLCD-KLGDMDYATRLFNQVSNPN 72
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
+LY ++I AY + +Y+ ++R+ P++F +P + KSC + K V
Sbjct: 73 VFLYNSIIRAYTHNSLYCD-VIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGKQV 131
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGD 196
H + K G + V E AL++ Y + +D+ A K+FDEMS+R+V+SW +++SGY R+G
Sbjct: 132 HGHLYKFGPRFHVVTENALIDMYMKF-DDLVDAHKVFDEMSERDVISWNSLLSGYARLGQ 190
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
+K A LF M D+ + +W ++I+G T G + +A+ FFR M + I P++++L+
Sbjct: 191 MKKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLA---GIEPDEISLISV 247
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
L + H G L+LGK IH Y R GL + + NALI+MY KCG L +A + F++ K +
Sbjct: 248 LPSCAHLGSLELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGKDV 307
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
SW++MI+ +A HG + + F EM R + ++P+G+TF+ LL+AC+H GL +QG Y
Sbjct: 308 ISWSTMISGYAYHGNAHRAFETFIEMQRAK---VKPNGITFLGLLSACSHVGLWQQGLKY 364
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
F +M + Y+IEP+IEHYGCL+D+L RAG+ E A+E+ K M ++PD +WGSLL+ C+ G
Sbjct: 365 FDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCRTKG 424
Query: 437 RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWI 496
D A A+ L+E++P++ G ++LANIY +LGKW++V ++RK+++ N KTPGCS I
Sbjct: 425 NLDVALVAMDHLVEVEPDDMGNYVLLANIYADLGKWEDVSRLRKIIRKENMKKTPGCSLI 484
Query: 497 EVDKQVHQFHSLDKTHPRTEEIYDALE 523
EV+ V +F + D + P EI L+
Sbjct: 485 EVNNIVQEFVAGDNSKPFWTEISLVLQ 511
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/514 (38%), Positives = 320/514 (62%), Gaps = 13/514 (2%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPN 76
+ IL+ C +I LK++ + + SQ++F K+V C + YA +F + PN
Sbjct: 18 VPILKNCPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVCNHH-AETEYANLLFKRVADPN 76
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQ----PNQFIYPHVLKSCPDVLESRG 132
+LY AMI AY + A ++Y+ M+ + P++F +P V+KSC ++
Sbjct: 77 AFLYNAMIRAYKHNKVYVL-AITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYDL 135
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
K VH + K G + VVE +LV Y + + + A K+F+EM++R+ VSW +ISG+
Sbjct: 136 GKQVHGHVFKFGQKSNTVVENSLVEMYVKC-DSLDDAHKVFEEMTERDAVSWNTLISGHV 194
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
R+G ++ A ++F+ M D+ + +W ++++G + G ++DA+ FFRRM M I P++++
Sbjct: 195 RLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMV---GIEPDEIS 251
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
LV L A G L+LGK IH Y + G + + NALI+MY KCGS+ E RR FD+ +
Sbjct: 252 LVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMN 311
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
++ + SW++MI A HG++ +I +F+EM Q I P+ +TF+ LL+AC H GL+ +
Sbjct: 312 ERDVISWSTMIVGLANHGRAHEAIELFQEM---QKAKIEPNIITFVGLLSACAHAGLLNE 368
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G YF+ M + Y IEP +EHYGCLV+LLG +GR ++ALE++K M ++PD +WGSLL+ C
Sbjct: 369 GLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSC 428
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+ + + A A++ L+E++P + G ++L+N+Y +LGKWD V ++RK+++ ++ KTPG
Sbjct: 429 RSHSNLEIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPG 488
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
CS IEVD V +F S D + P ++ IY L+ +V
Sbjct: 489 CSSIEVDNMVQEFASGDDSKPFSKAIYRVLKLLV 522
>gi|255577499|ref|XP_002529628.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530913|gb|EEF32773.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 400
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/413 (52%), Positives = 264/413 (63%), Gaps = 62/413 (15%)
Query: 6 NQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYA 65
N NQ LNQ LAIL +CN++NHLKQLQS+LT +G SQT FY+FKLVRFC L LSN YA
Sbjct: 2 NTANQNLNQLALAILSKCNNLNHLKQLQSYLTVIGHSQTQFYSFKLVRFCILNLSNFNYA 61
Query: 66 RFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
R+IF+HL +PN YL+TA++TAYAS P H SAF LYRDMVRR P+PN FI+PHVLKSC
Sbjct: 62 RYIFNHLHSPNIYLFTALVTAYASNPDHHLSAFELYRDMVRRAHPKPNHFIFPHVLKSC- 120
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
+ TK+VH+QI K GF QYPVV+TALV+SYSR +DIG AR++FDEMS+RNVVSWT
Sbjct: 121 -----QNTKVVHSQIAKLGFSQYPVVQTALVDSYSRFMSDIGCARQVFDEMSERNVVSWT 175
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
AMI+GYTRVG++ NA S+FD MP+RDVP+WNS+IAGCTQNGLF +AI FR+M +
Sbjct: 176 AMITGYTRVGEVGNAISIFDKMPERDVPSWNSIIAGCTQNGLFIEAICLFRKMILVAQS- 234
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
+PNQVT VCALSA GHTGMLQLGK I Y L+D+ G+ G +EA
Sbjct: 235 -KPNQVTTVCALSACGHTGMLQLGKWIEHY-------------GCLVDILGRAGRFEEAL 280
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
V EM I PD V + SLLN C
Sbjct: 281 E-------------------------------VVREM------KIEPDEVVWGSLLNGCK 303
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGC-LVDLLGRAGRFEEALEVVKGMK 417
G + + K K I+P+ YG L +L G G+++E +V K +K
Sbjct: 304 VHGNTDLAESAIK---KLIEIDPKNGGYGIMLANLYGGLGKWDEVRKVRKMLK 353
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/428 (40%), Positives = 239/428 (55%), Gaps = 90/428 (21%)
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
L+S T + H+Q + F + +V ++N ++ AR +F+ + N+ +TA+
Sbjct: 28 LQSYLTVIGHSQ---TQFYSFKLVRFCILNL-----SNFNYARYIFNHLHSPNIYLFTAL 79
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
++ Y S PD + A+ L+ D + RR + +
Sbjct: 80 VTAYA-------------SNPDHHLSAFE----------LYRDMV---RRA------HPK 107
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS-LKEARR 306
PN L + +T KV+H + + G + AL+D Y + S + AR+
Sbjct: 108 PNHFIFPHVLKSCQNT------KVVHSQIAKLGFSQYPVVQTALVDSYSRFMSDIGCARQ 161
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR------------CQDHNI---- 350
FD S++ + SW +MI + G+ N+I +F++M C + +
Sbjct: 162 VFDEMSERNVVSWTAMITGYTRVGEVGNAISIFDKMPERDVPSWNSIIAGCTQNGLFIEA 221
Query: 351 -------------RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLV 397
+P+ VT + L+AC H G+++ G+ IEHYGCLV
Sbjct: 222 ICLFRKMILVAQSKPNQVTTVCALSACGHTGMLQLGK--------------WIEHYGCLV 267
Query: 398 DLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGG 457
D+LGRAGRFEEALEVV+ MKIEPDEVVWGSLLNGCK++G TD AE A+KKLIEIDP NGG
Sbjct: 268 DILGRAGRFEEALEVVREMKIEPDEVVWGSLLNGCKVHGNTDLAESAIKKLIEIDPKNGG 327
Query: 458 YGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEE 517
YGIMLAN+YG LGKWDEVRKVRKMLKD NAYKTPGCSWIEVD +V QF+S+DKTHPR+EE
Sbjct: 328 YGIMLANLYGGLGKWDEVRKVRKMLKDHNAYKTPGCSWIEVDNEVCQFYSVDKTHPRSEE 387
Query: 518 IYDALESM 525
IY LE++
Sbjct: 388 IYRILENL 395
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/524 (37%), Positives = 323/524 (61%), Gaps = 15/524 (2%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
+ L + IL+ C +I LK + + + SQ++F K+V C K +L YA +F
Sbjct: 11 RELENFFVPILQNCKNIVELKSIHAHVIKYSLSQSSFLVTKMVDVCD-KTEDLGYASLLF 69
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQ------PNQFIYPHVLKS 123
+ PN YLY AMI A+ +A A Y++M+R P+ P++F +P V+KS
Sbjct: 70 KQVKEPNGYLYNAMIRAHTHNKVYAL-AILFYKEMLRLKDPESENPIFPDRFTFPFVIKS 128
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
C ++ K VH + K G + +E AL++ Y++ + + A K+FD M +R+ +S
Sbjct: 129 CSGLVCYNLGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLD-AHKVFDGMVERDAIS 187
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
W ++ISG+ VG ++ A +LFD MP R + +W ++I+G T+ G ++DA+ FR+M +
Sbjct: 188 WNSIISGHVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIV-- 245
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
+ P++++++ L A G L++GK IH Y RNGL + I NAL++MY KCG + +
Sbjct: 246 -GVEPDEISIISVLPACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQ 304
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A + FD+ SK + SW++MI A HG++ +I +F+ M + + I P+G+TF+ LL+A
Sbjct: 305 AYQLFDQMSKGDVISWSTMIGGLANHGKAREAIELFKRMKKAK---IEPNGITFLGLLSA 361
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C H G +G AYF M+K Y IEP++EHYGCLVD+LGRAGR +AL+V++ M ++PD
Sbjct: 362 CAHAGFWNEGLAYFDSMSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSK 421
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+WGSLL+ C+ + D A A++ L E++P++ G ++L+NIY +L KWD V ++RK++K
Sbjct: 422 IWGSLLSSCRTHSNLDIAIIAMEHLEELEPDDTGNYVLLSNIYADLAKWDGVSRMRKLIK 481
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
++ KTPG S I+++ V +F S D + P + +I+ LE + +
Sbjct: 482 SKSMKKTPGSSLIDINNVVQEFVSWDDSKPFSRDIFWLLELLTS 525
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/518 (38%), Positives = 316/518 (61%), Gaps = 11/518 (2%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
+ L + + L+ C I LK++ + + L SQ+NF K++ C L +++YA +F
Sbjct: 7 RELENRYITSLKNCFKITQLKKIHAHVVKLSLSQSNFLVTKMLDSCD-NLGHVSYATLLF 65
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQ--PNQFIYPHVLKSCPDV 127
L PN + Y A+I YA H SSA S++ M+ P++F +P V+KSC +
Sbjct: 66 KQLLHPNIFTYNAIIRTYAHN-RHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGI 124
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
L R VH + K G + + + E AL++ Y++ G D+ A K+F+EMS R+V+SW ++
Sbjct: 125 LCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFG-DLTNACKVFEEMSHRDVISWNSL 183
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I GY ++G + +A LFD MP R + +W ++I G + G + DA+ FR M M I
Sbjct: 184 IFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMV---GIE 240
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P++++++ L A G L++GK IH Y +NG + I NALI+MY KCG + EA
Sbjct: 241 PDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNL 300
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FD+ +K + SW++MI A HG+ +I +FEEM + + + P+ +TF+ +L AC+H
Sbjct: 301 FDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVR---VAPNEITFLGVLLACSHT 357
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GL ++G YF +M+ +Y IEP+IEHYGCL+DLLGR+G +AL+ + M I+PD +W S
Sbjct: 358 GLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNS 417
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LL+ C+I+ A AVK+L+E++P G ++LAN+Y E GKW++V +RK+++++
Sbjct: 418 LLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRI 477
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
KTPG S IEV+ V +F S D + P ++E++ LE +
Sbjct: 478 KKTPGSSSIEVNNVVQEFVSSDDSKPFSQEVFWILEGL 515
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/514 (37%), Positives = 314/514 (61%), Gaps = 9/514 (1%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
L + + L C I LK++ + + L SQ+NF K++ C LS++ YA IF
Sbjct: 6 LENRFVTTLRNCPKIAELKKIHAHIVKLSLSQSNFLVTKMLDLCD-NLSHVDYATMIFQQ 64
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
L PN + Y A+I Y H A +++ M+ P++F +P V+KSC +L R
Sbjct: 65 LENPNVFSYNAIIRTYTHNHKHPL-AITVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRR 123
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
+ VH + K G + + + E AL++ Y++ G D+ A ++++EM++R+ VSW ++ISG+
Sbjct: 124 LGQQVHAHVCKFGPKTHAITENALIDMYTKCG-DMSGAYQVYEEMTERDAVSWNSLISGH 182
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
R+G +K+A +FD MP R + +W ++I G + G ++DA+ FR M + I P+++
Sbjct: 183 VRLGQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVV---GIEPDEI 239
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
+++ L A G L++GK IH Y ++G ++ + NAL++MY KCG + EA F++
Sbjct: 240 SVISVLPACAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQM 299
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
+K + SW++MI A HG+ +I VFE+M Q + P+GVTF+ +L+AC H GL
Sbjct: 300 IEKDVISWSTMIGGLANHGKGYAAIRVFEDM---QKAGVTPNGVTFVGVLSACAHAGLWN 356
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G YF +M Y +EPQIEHYGCLVDLLGR+G+ E+AL+ + M ++PD W SLL+
Sbjct: 357 EGLRYFDVMRVDYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLLSS 416
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C+I+ + A A+++L++++P G ++LANIY +L KW+ V VRK+++ + KTP
Sbjct: 417 CRIHHNLEIAVVAMEQLLKLEPEESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRIKKTP 476
Query: 492 GCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
GCS IEV+ V +F S D + P ++E++ L+ +
Sbjct: 477 GCSLIEVNNLVQEFVSGDDSKPFSQEVFWILKGL 510
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/507 (37%), Positives = 313/507 (61%), Gaps = 9/507 (1%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPN 76
+ L+R N K++ + + G SQ++F K+V FC K+ ++ YA +F+ ++ PN
Sbjct: 14 IPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCD-KIEDMDYATRLFNQVSNPN 72
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
+LY ++I AY + +Y+ ++R+ P++F +P + KSC + K V
Sbjct: 73 VFLYNSIIRAYTHNSLYCD-VIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQV 131
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGD 196
H + K G + V E AL++ Y + +D+ A K+FDEM +R+V+SW +++SGY R+G
Sbjct: 132 HGHLCKFGPRFHVVTENALIDMYMKF-DDLVDAHKVFDEMYERDVISWNSLLSGYARLGQ 190
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
+K A LF M D+ + +W ++I+G T G + +A+ FFR M + I P++++L+
Sbjct: 191 MKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLA---GIEPDEISLISV 247
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
L + G L+LGK IH Y R G + + NALI+MY KCG + +A + F + K +
Sbjct: 248 LPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 307
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
SW++MI+ +A HG + +I F EM R + ++P+G+TF+ LL+AC+H G+ ++G Y
Sbjct: 308 ISWSTMISGYAYHGNAHGAIETFNEMQRAK---VKPNGITFLGLLSACSHVGMWQEGLRY 364
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
F +M + Y+IEP+IEHYGCL+D+L RAG+ E A+E+ K M ++PD +WGSLL+ C+ G
Sbjct: 365 FDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPG 424
Query: 437 RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWI 496
D A A+ L+E++P + G ++LANIY +LGKW++V ++RKM+++ N KTPG S I
Sbjct: 425 NLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLI 484
Query: 497 EVDKQVHQFHSLDKTHPRTEEIYDALE 523
EV+ V +F S D + P EI L+
Sbjct: 485 EVNNIVQEFVSGDNSKPFWTEISIVLQ 511
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/523 (37%), Positives = 316/523 (60%), Gaps = 17/523 (3%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
+ + + IL+ C +I LK++ + + SQ++F K+V C YA +F
Sbjct: 11 REMEDMFVPILKDCPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVCN-HYGETEYANLLF 69
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQ------PNQFIYPHVLKS 123
+ PN +LY AMI AY + A ++Y+ M+ G P P++F +P V+KS
Sbjct: 70 KGVADPNAFLYNAMIRAYKHNKVYVL-AITVYKQML--GNPHGENPIFPDKFTFPFVVKS 126
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
C ++ K VH + K G + VVE +LV Y + + + A ++F+EM++R+ VS
Sbjct: 127 CAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKC-DSLDDAHRVFEEMTERDAVS 185
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
W +ISG+ R+G ++ A ++F+ M D+ + +W ++++G + G ++DA+ FFRRM M
Sbjct: 186 WNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMV-- 243
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
I P++++LV L G L+LGK IH Y + G + + NALI+MY KCGS+ +
Sbjct: 244 -GIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQ 302
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
RR FD+ ++ + SW++MI A HG++ +I +F+EM Q I P +TF+ LL A
Sbjct: 303 GRRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEM---QKAKIEPSIITFVGLLTA 359
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C H GL+ +G YF+ M + Y IEP +EHYGCLV+LLG +GR ++ALE+VK M +PD
Sbjct: 360 CAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSP 419
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+WGSLL+ C+ +G A A++ L+E++P + G ++L+N+Y +LGKWD V ++RK+++
Sbjct: 420 IWGSLLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMR 479
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
++ KTPGCS IEVD V +F S D + P ++ I L+ +V
Sbjct: 480 SKSMKKTPGCSSIEVDNMVQEFASGDDSKPFSKAICRVLKLLV 522
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/509 (38%), Positives = 309/509 (60%), Gaps = 18/509 (3%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYA 88
LK+ + + SQ+NF K++ C + ++ YA F+F + PN YLY AMI A
Sbjct: 4 LKKNHALVIKYALSQSNFLVTKMIDVCD-RNEDMDYASFLFKEVIDPNAYLYNAMIRA-C 61
Query: 89 SQPAHASSAFSLYRDMVRRGQPQ--------PNQFIYPHVLKSCPDVLESRGTKMVHTQI 140
+ + S Y+ M+R + P++F +P V+K+C + K VH Q
Sbjct: 62 THNSMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVHAQF 121
Query: 141 VKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
K G + + + E AL++ Y++ N + A LFDEM +R +SW +ISG+ R+G ++ A
Sbjct: 122 FKFGKKSHLITENALIDMYTKCDNLLD-AHNLFDEMHERGAISWNGIISGHVRLGQMRRA 180
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
+LFD MP+R + +W ++I+G T+ G + DA+ FR M + I P++ +++ L A
Sbjct: 181 RALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIA---GIEPDEASIISVLPAC 237
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
G L+ GK IH + RNGL + I NALI+MY KCG + +A + FD+ + + SW+
Sbjct: 238 AKLGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWS 297
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
+MI A HG+ +I +FE M + NI+P+G+TF+ LL+AC H G E+G YF M
Sbjct: 298 TMIGGLANHGKVREAIAIFERM---KQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTM 354
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
K + IEP+IEHYG LVDLLGRAGR +AL++V+ M ++PD +WGSLL+ C+ + +
Sbjct: 355 KKDFHIEPEIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEV 414
Query: 441 AEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDK 500
A A++ L E++P++ G ++L+NIY +LGKWD+V ++RK+++ + KTPGCS IEV+
Sbjct: 415 AVIAMEHLEELEPDDTGNYVLLSNIYADLGKWDDVSRMRKLVRSKRMKKTPGCSLIEVNN 474
Query: 501 QVHQFHSLDKTHPRTEEIYDALESMVALH 529
+F S D + P ++EI+ LE ++A H
Sbjct: 475 VAQEFVSGDDSKPYSKEIFWLLE-LLAFH 502
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/528 (37%), Positives = 314/528 (59%), Gaps = 11/528 (2%)
Query: 1 MVSVTNQLNQTLNQ-QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL 59
+ + T+QL+ N Q L +L+RC+++ L+Q+ + G A KL+ FC
Sbjct: 5 LCTPTSQLSSESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPN 64
Query: 60 S-NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
S +L YAR +FD + PNT+++ MI Y S A LY M+ P N + +P
Sbjct: 65 SGSLAYARTVFDRIFRPNTFMWNTMIRGY-SNSKEPEEALLLYHHMLYHSVPH-NAYTFP 122
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
+LK+C + S T+ +H I+K GF +L+N YS+SG DI AR LFD++
Sbjct: 123 FLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSG-DIKSARLLFDQVDQ 181
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
R+ VSW +MI GYT+ G+I+ A +F+ MP+R++ +W S+I+GC G +A++ F RM
Sbjct: 182 RDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRM 241
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
+ I+ + V LV L A G+L GK IH Y+ ++ +++D + LIDMY KC
Sbjct: 242 Q---TAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKC 298
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G L+EA F + +K ++ W +MI+ +A+HG+ ++ E M+ Q + P+ +TF
Sbjct: 299 GDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREAL---EWFMKMQTAGVEPNQMTFT 355
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
+L AC+H GLV + + F+ M + + +P IEHYGC+VDLLGRAG +EA E+++ M +
Sbjct: 356 GILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPV 415
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
+P+ +WG+LLN C I+G + + K LI++DP +GG I LA+I+ G+W++ +V
Sbjct: 416 KPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARV 475
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
R+ +K++ K PGCS I V+ H+F + D++HP+ +EI LE +V
Sbjct: 476 RRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIV 523
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/509 (39%), Positives = 310/509 (60%), Gaps = 12/509 (2%)
Query: 15 QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
+L++L++C+++ HL Q F+ + G Q N + + C+ L Y+ IF H T
Sbjct: 43 HLLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACS-SLGFSHYSHSIFTHKTR 101
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
P+ YLY +I A S P A+ A LY + + + + + P VLK+ +L +
Sbjct: 102 PDIYLYNTIIKAL-SNPELATEAILLY-NRILASDLRFDTYSLPFVLKAVVRLLAIHVGR 159
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H Q + +G V TAL+ YS G + AR+LFD + R+V W AM++GY +V
Sbjct: 160 QIHCQAIGTGLVSDIHVVTALIQMYSSCGC-VSEARQLFDGVCFRDVAFWNAMVAGYAKV 218
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
GD+ NA LF+ MP+R+V +W +VIAG Q ++AI+ FRRM +E + P+++ ++
Sbjct: 219 GDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLE---EVEPDEIAML 275
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
ALSA H G L+LG+ IH Y+ ++GL ++NALIDMY KCG +++A F K
Sbjct: 276 AALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHK 335
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN-IRPDGVTFISLLNACTHGGLVEQG 373
+ +W SMI+ ALHG ++ EM C + N I+P+ +TF+++L+AC H GLVE G
Sbjct: 336 SVITWTSMIDGLALHGLGREAL----EMFSCMERNRIKPNEITFVAILSACCHVGLVEMG 391
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
R YFK M Y I+P+I+HYGC++DLLGRAG +EA E+V+GM E + +WGSLL +
Sbjct: 392 RWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAAR 451
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
I+G + + A++ LI+++P+N G +L+NIY KW+E VRK+++D K PG
Sbjct: 452 IHGDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGG 511
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
S IEV+ +VH+F + DK HP++E I++ L
Sbjct: 512 SCIEVNNRVHEFVAGDKLHPQSERIFEVL 540
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/509 (39%), Positives = 310/509 (60%), Gaps = 12/509 (2%)
Query: 15 QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
+L++L++C+++ HL Q F+ + G Q N + + C+ L Y+ IF H T
Sbjct: 43 HLLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACS-SLGFSHYSHSIFTHKTR 101
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
P+ YLY +I A S P A+ A LY + + + + + P VLK+ +L +
Sbjct: 102 PDIYLYNTIIKAL-SNPELATEAILLY-NRILASDLRFDTYSLPFVLKAVVRLLAIHVGR 159
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H Q + +G V TAL+ YS G + AR+LFD + R+V W AM++GY +V
Sbjct: 160 QIHCQAIGTGLVSDIHVVTALIQMYSSCGC-VSEARQLFDGVCFRDVAFWNAMVAGYAKV 218
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
GD+ NA LF+ MP+R+V +W +VIAG Q ++AI+ FRRM +E + P+++ ++
Sbjct: 219 GDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLE---EVEPDEIAML 275
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
ALSA H G L+LG+ IH Y+ ++GL ++NALIDMY KCG +++A F K
Sbjct: 276 AALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHK 335
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN-IRPDGVTFISLLNACTHGGLVEQG 373
+ +W SMI+ ALHG ++ EM C + N I+P+ +TF+++L+AC H GLVE G
Sbjct: 336 SVITWTSMIDGLALHGLGREAL----EMFSCMERNRIKPNEITFVAILSACCHVGLVEMG 391
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
R YFK M Y I+P+I+HYGC++DLLGRAG +EA E+V+GM E + +WGSLL +
Sbjct: 392 RWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAAR 451
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
I+G + + A++ LI+++P+N G +L+NIY KW+E VRK+++D K PG
Sbjct: 452 IHGDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGG 511
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
S IEV+ +VH+F + DK HP++E I++ L
Sbjct: 512 SCIEVNNRVHEFVAGDKLHPQSERIFEVL 540
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/520 (38%), Positives = 297/520 (57%), Gaps = 23/520 (4%)
Query: 23 CNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTA 82
C LKQL + GQ Q A ++++FC ++ YAR +F + PN + +
Sbjct: 29 CKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNT 88
Query: 83 MITAYA-SQPAH-ASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQI 140
++ A + H S A L+ M+ G+ +PN+F +P VLK+C R K +H I
Sbjct: 89 ILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLI 148
Query: 141 VKSGFEQYPVVETALVNSYSRSGN---------------DIGIARKLFDEMSDRNVVSWT 185
VK GF + V + LV Y D +L D NVV W
Sbjct: 149 VKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWN 208
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
MI G R+GDIK+A +LFD MP R V +WN +I+G QNG F +AI+ F+ M S N
Sbjct: 209 IMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQ---SSN 265
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
I PN VTLV L AI G L+LGK IH Y +N +++D + +AL+DMY KCGS+ EA
Sbjct: 266 IDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEAL 325
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
+ F+ K+ +W+++I +FA+HG++E++I F M + + P+ V +I +L+AC+
Sbjct: 326 QVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKA---GVTPNDVAYIGILSACS 382
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
H GLVE+GR++F M K ++P+IEHYGC+VDLLGRAG EEA E+++ M IEPD+V+W
Sbjct: 383 HAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIW 442
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
+LL CK++ E + L+E+ P++ G + L+N+Y LG W+ V +VR +K
Sbjct: 443 KALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGM 502
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ K PGCSWIE+ +H+F D +H + +EI L M
Sbjct: 503 DIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEM 542
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/548 (38%), Positives = 307/548 (56%), Gaps = 29/548 (5%)
Query: 1 MVSVTNQLNQTLN--QQVLAILER----CNHINHLKQLQSFLTTLGQSQTNFYAFKLVRF 54
M S N+TLN Q IL + C LKQL + GQ Q A ++++F
Sbjct: 1 MNSTIYNPNRTLNFSPQPPLILSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKF 60
Query: 55 CTLKLSNLTYARFIFDHLTTPNTYLYTAM--ITAYASQPAHASSAFSLYRDMVRRGQPQP 112
C ++ YAR +F + PN + + + I A + S A L+ M+ G+ +P
Sbjct: 61 CAFSSRDIDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKP 120
Query: 113 NQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN-------- 164
N+F +P VLK+C R K +H IVK GF + V + LV Y
Sbjct: 121 NRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLF 180
Query: 165 -------DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNS 217
D +L D NVV W MI G R+GDIK+A +LFD MP R V +WN
Sbjct: 181 CKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNV 240
Query: 218 VIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVY 277
+I+G QNG F +AI+ F+ M S NI PN VTLV L AI G L+LGK IH Y
Sbjct: 241 MISGYAQNGHFIEAINLFQEMQ---SSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAG 297
Query: 278 RNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSIC 337
+N +++D + +AL+DMY KCGS+ +A + F+ K+ +W+++I +FA+HG++E++I
Sbjct: 298 KNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAII 357
Query: 338 VFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLV 397
F M + + P+ V +I +L+AC+H GLVE+GR++F M K ++P+IEHYGC+V
Sbjct: 358 HFHLMGKA---GVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMV 414
Query: 398 DLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGG 457
DLLGRAG EEA E+++ M IEPD+V+W +LL CK++ E + L+E+ P++ G
Sbjct: 415 DLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSG 474
Query: 458 YGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEE 517
+ L+N+Y LG W+ V +VR +K + K PGCSWIE+ +H+F D +H + +E
Sbjct: 475 SYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKE 534
Query: 518 IYDALESM 525
I L M
Sbjct: 535 IQAMLGEM 542
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/528 (36%), Positives = 313/528 (59%), Gaps = 11/528 (2%)
Query: 1 MVSVTNQLNQTLNQ-QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL 59
+ + T+QL+ N Q L +L+RC+++ L+Q+ + G A KL+ FC
Sbjct: 5 LCTPTSQLSSESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPN 64
Query: 60 S-NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
S +L YAR +FD + PNT+++ MI Y S A LY M+ P N + +P
Sbjct: 65 SGSLAYARTVFDRIFRPNTFMWNTMIRGY-SNSKEPEEALLLYHHMLYHSVPH-NAYTFP 122
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
+LK+C + T+ +H I+K GF +L+N YS+SG DI AR LFD++
Sbjct: 123 FLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSG-DIKSARLLFDQVDQ 181
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
R+ VSW +MI GYT+ G+I+ A +F+ MP+R++ +W S+I+GC G +A++ F RM
Sbjct: 182 RDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRM 241
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
+ I+ + V LV L A G+L GK IH Y+ ++ +++D + LIDMY KC
Sbjct: 242 Q---TAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKC 298
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G L+EA F + +K ++ W +MI+ +A+HG+ ++ E M+ Q + P+ +TF
Sbjct: 299 GDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREAL---EWFMKMQTAGVEPNQMTFT 355
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
+L AC+H GLV + + F+ M + + +P IEHYGC+VDLLGRAG +EA E+++ M +
Sbjct: 356 GILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPV 415
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
+P+ +WG+LLN C I+G + + K LI++DP +GG I LA+I+ G+W++ +V
Sbjct: 416 KPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARV 475
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
R+ +K++ K PGCS I V+ H+F + D++HP+ +EI LE +V
Sbjct: 476 RRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIV 523
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/511 (39%), Positives = 307/511 (60%), Gaps = 14/511 (2%)
Query: 15 QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
++ ++++ I+HL Q+ + L G FKL R L L Y+ +F
Sbjct: 32 RLAVLIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQR-SYASLGRLDYSVALFGRTQN 90
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
P+ + +TA+I +A + H A + Y M+ +G +PN F + +LK CP K
Sbjct: 91 PSVFFWTAIIHGHALRGLH-EQALNFYAQMLTQGV-EPNAFTFSSILKLCP----IEPGK 144
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H+Q VK GF+ V T L++ Y+R G D+ A++LFD M ++++VS TAM++ Y +
Sbjct: 145 ALHSQAVKLGFDSDLYVRTGLLDVYARGG-DVVSAQQLFDTMPEKSLVSLTAMLTCYAKH 203
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G++ A LFD M +RD WN +I G TQNG+ ++A+ FRRM + +PN+VT++
Sbjct: 204 GELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM---LKAKAKPNEVTVL 260
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
LSA G G L+ G+ +H Y+ NG+ + + AL+DMY KCGSL++AR FD+ K
Sbjct: 261 SVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK 320
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ +WNSMI +A+HG S+ ++ +F+ M R H P +TFI +L+AC H G V +G
Sbjct: 321 DVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLH---PTNITFIGILSACGHSGWVTEGW 377
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
F M Y IEP+IEHYGC+V+LLGRAG E+A E+VK M IEPD V+WG+LL C++
Sbjct: 378 DIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRL 437
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+G+ E V+ L++ + N G I+L+NIY +G WD V ++R M+KD K PGCS
Sbjct: 438 HGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCS 497
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
IEV+ +VH+F + HP+ +EIY LE +
Sbjct: 498 SIEVNNKVHEFLAGGLNHPKRKEIYMMLEEI 528
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/499 (38%), Positives = 296/499 (59%), Gaps = 41/499 (8%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
+ + YA + + PN ++Y AMI + Q A LY M+R P + +P
Sbjct: 27 FNRMDYAVLAYTQMEIPNVFVYNAMIKGFV-QSYQPVQALELYVQMLR-ANVSPTSYTFP 84
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
++K+C V + R + VH + ++GF+ + V+T+LV+ YS G I + ++FDEM +
Sbjct: 85 SLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGR-IEESVRVFDEMPE 143
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAG----------------- 221
R+V +WT M+SG RVGD+ +A LFD MPDR++ WN++I G
Sbjct: 144 RDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVAELLFNQM 203
Query: 222 -------------C-TQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
C +QN F +A+ F M I P++VT+ +SA H G L
Sbjct: 204 PARDIISWTTMINCYSQNKRFREALGVFNEMA---KHGISPDEVTMATVISACAHLGALD 260
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFA 327
LGK IH Y+ ++G +LD +I +ALIDMY KCGSL + F + +K L WNS+I A
Sbjct: 261 LGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLA 320
Query: 328 LHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIE 387
+HG +E ++ +F++M R I+P+GVTF+S+L+AC H GL+E+GR F MT+ + I
Sbjct: 321 VHGYAEEALAMFDKMER---EKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIP 377
Query: 388 PQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKK 447
P +EHYGC+VDLL +AG EEAL++++ MK+EP+ V+WG+LL+GCK++ + A+ A K
Sbjct: 378 PGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGCKLHRNLEIAQVAANK 437
Query: 448 LIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK-TPGCSWIEVDKQVHQFH 506
L+ ++P N GY +L N+ E+ +W E K+R +K++ K PG SWIE++ QVHQF
Sbjct: 438 LMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVEKRCPGSSWIEMESQVHQFA 497
Query: 507 SLDKTHPRTEEIYDALESM 525
+ DK+H ++EIY L +
Sbjct: 498 ASDKSHAASDEIYSLLAEL 516
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 133/305 (43%), Gaps = 19/305 (6%)
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
IS + + A + M +V +N++I G Q+ A+ + +M + N+
Sbjct: 21 ISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQM---LRANVS 77
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P T + A G L+ + +HG+V+RNG D F+ +L+D Y G ++E+ R
Sbjct: 78 PTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRV 137
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FD ++ + +W +M++ G ++ +F+ M D N+ T+ +L++
Sbjct: 138 FDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMM---PDRNL----ATWNTLIDGYARL 190
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK---IEPDEVV 424
V+ F M I + +++ + RF EAL V M I PDEV
Sbjct: 191 REVDVAELLFNQMPAR-----DIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVT 245
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGY-GIMLANIYGELGKWDEVRKVRKMLK 483
++++ C G D + +++ N Y G L ++Y + G D + L+
Sbjct: 246 MATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLR 305
Query: 484 DRNAY 488
++N +
Sbjct: 306 EKNLF 310
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 123/295 (41%), Gaps = 41/295 (13%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+L + A +F+ + + +T MI Y SQ A ++ +M + G P++
Sbjct: 189 RLREVDVAELLFNQMPARDIISWTTMINCY-SQNKRFREALGVFNEMAKHGI-SPDEVTM 246
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
V+ +C + K +H I++ GF + +AL++ Y++ G+ + + +F ++
Sbjct: 247 ATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGS-LDRSLLMFFKLR 305
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
++N+ W ++I G G + A ++FD M
Sbjct: 306 EKNLFCWNSVIEGLAVHGYAEEALAMFDKME----------------------------- 336
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN-GLDLDSFISNALIDMYG 296
+ I+PN VT V LSA H G+++ G+ + R+ + ++D+
Sbjct: 337 -----REKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLS 391
Query: 297 KCGSLKEARRAFDRNSKKRLTS--WNSMINSFALHGQSENSICVFEEMMRCQDHN 349
K G L+EA + R K + W ++++ LH E + ++M + N
Sbjct: 392 KAGLLEEALQLI-RTMKLEPNAVIWGALLSGCKLHRNLEIAQVAANKLMVLEPGN 445
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 272 IHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
++ + + + D ++ N I + A A+ + + +N+MI F Q
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQ 60
Query: 332 SENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR--IEPQ 389
++ ++ +M+R N+ P TF SL+ AC GLV Q R + +R +
Sbjct: 61 PVQALELYVQMLRA---NVSPTSYTFPSLIKAC---GLVSQLRFAEAVHGHVWRNGFDSH 114
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ LVD GR EE++ V M E D W ++++G
Sbjct: 115 VFVQTSLVDFYSSMGRIEESVRVFDEMP-ERDVFAWTTMVSG 155
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/517 (37%), Positives = 307/517 (59%), Gaps = 10/517 (1%)
Query: 5 TNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLT 63
T QL Q +Q +++LERC++I LKQ+ L G + +L+ + +++ SNLT
Sbjct: 3 TLQLLQLNVEQTMSLLERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLT 62
Query: 64 YARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
YAR +FD +++PNT ++ MI AY S A LY M+ P N + +P +LK+
Sbjct: 63 YARMVFDRISSPNTVMWNTMIRAY-SNSNDPEEALLLYHQMLHHSIPH-NAYTFPFLLKA 120
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
C + T +H QI+K GF +L+ Y+ SG+ I A LFD + R++VS
Sbjct: 121 CSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGS-IKSAHVLFDLLPSRDIVS 179
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
W MI GY + G+++ A +F +MP+++V +W S+I G + G+ +A+ ++M +
Sbjct: 180 WNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQM---LV 236
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
I+P+++TL C+LSA G L+ GK IH Y+ +N + +D + ALIDMY KCG +K+
Sbjct: 237 AGIKPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKK 296
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A F + KK + +W ++I FA+HG+ ++ F +M Q I+P TF ++L A
Sbjct: 297 ALLVFSKLEKKCVYTWTAIIGGFAVHGKGSEALDWFTQM---QKAGIKPTSFTFTAVLTA 353
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C+H GLVE+G++ F+ M+ Y ++P +EHYGC+VDLLGRAG +EA E V+ M I+P+
Sbjct: 354 CSHTGLVEEGKSLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAA 413
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+WGSLLN C ++ + + K LIE+DP + G I LA+I+ G+WDE +VR +K
Sbjct: 414 IWGSLLNACHLHKHLELGKEIGKFLIELDPEHDGRYIHLASIHAAAGEWDEASQVRSHIK 473
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYD 520
++ PGCS I ++ H+F + + HP E+YD
Sbjct: 474 NKGLLNLPGCSTITLNGVAHEFFAGAEPHPHVREMYD 510
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/521 (37%), Positives = 304/521 (58%), Gaps = 14/521 (2%)
Query: 5 TNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTY 64
+N L + + ++++L C +I H+ + + + Q F F+L+R C+ L ++ Y
Sbjct: 21 SNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCS-TLDSVDY 79
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A +F +++ PN YLYTAMI + S ++ SLY M+ P+ ++ VLK+C
Sbjct: 80 AYDVFSYVSNPNVYLYTAMIDGFVSS-GRSADGVSLYHRMIH-NSVLPDNYVITSVLKAC 137
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ + + +H Q++K GF V ++ Y +SG + A+K+FDEM DR+ V+
Sbjct: 138 ----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVN-AKKMFDEMPDRDHVAA 192
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T MI+ Y+ G IK A LF + +D W ++I G +N + A+ FR M ME
Sbjct: 193 TVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME--- 249
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
N+ N+ T VC LSA G L+LG+ +H +V ++L +F+ NALI+MY +CG + EA
Sbjct: 250 NVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEA 309
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
RR F K + S+N+MI+ A+HG S +I F +M+ + RP+ VT ++LLNAC
Sbjct: 310 RRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMV---NRGFRPNQVTLVALLNAC 366
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+HGGL++ G F M + + +EPQIEHYGC+VDLLGR GR EEA ++ + IEPD ++
Sbjct: 367 SHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIM 426
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
G+LL+ CKI+G + E K+L E + + G ++L+N+Y GKW E ++R+ ++D
Sbjct: 427 LGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRD 486
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PGCS IEVD Q+H+F D HP E IY L+ +
Sbjct: 487 SGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/525 (38%), Positives = 315/525 (60%), Gaps = 14/525 (2%)
Query: 7 QLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT-LKLSNLTYA 65
Q + L +++++L C HIN +KQ+ + + G Q F KL+R T L + Y
Sbjct: 33 QEQKILESRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYP 92
Query: 66 RFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
R +F + PN +L+TA+I YA Q S LY M R+G P F + +LK+C
Sbjct: 93 RLVFQQVEYPNPFLWTALIRGYALQGPFMESVL-LYNSMRRQG-IGPVSFTFTALLKACS 150
Query: 126 DVLESRGTKMVHTQ-IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
L+ + VHTQ I+ GF V L++ Y + G +G ++FDEM DR+V+SW
Sbjct: 151 AALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGC-LGCGHRVFDEMLDRDVISW 209
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T++I Y +VG+++ A+ LFD +P +D+ AW +++ G QN +A+ F RM +
Sbjct: 210 TSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQ---AA 266
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS--FISNALIDMYGKCGSLK 302
++ ++VTLV +SA G + + ++G S + +ALIDMY KCGS++
Sbjct: 267 GVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVE 326
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
+A + F+R ++ + S++SMI FA+HG + ++ +F+EM++ + I+P+ VTFI +L
Sbjct: 327 DAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTE---IKPNRVTFIGVLT 383
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H G+VEQG+ F +M + + + P +HY C+VDLLGRAGR EEAL +VK M + P
Sbjct: 384 ACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHG 443
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
VWG+LL C+I+G D A+ A L E++PN G I+L+NIY G+WD+V KVRK++
Sbjct: 444 GVWGALLGACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLM 503
Query: 483 KDRNAYKTPGCSWIEVDKQ-VHQFHSLDKTHPRTEEIYDALESMV 526
+ + K PGCSW+E K +H+F + D +HP++ EI ALE ++
Sbjct: 504 RAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLL 548
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/510 (37%), Positives = 303/510 (59%), Gaps = 9/510 (1%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTY 78
+L C +KQ+ + L T G KL++ + + ++YA +FDH P+ +
Sbjct: 7 LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLF 66
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHT 138
LY +I A ++ +F+ +R ++R + PNQ+ + K C + + V
Sbjct: 67 LYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGEQVRV 126
Query: 139 QIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIK 198
+K G E V AL+ Y + + + ARK+FD +R++ SW M+SGY R+G +
Sbjct: 127 HAIKLGLENNLFVTNALIGMYV-NLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMD 185
Query: 199 NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
A LFD MP++DV +W ++I+GC Q G F +A+ F M ++ + PN+ TL +L+
Sbjct: 186 EARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNM---LAKGMSPNEYTLASSLA 242
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS--KKRL 316
A + L G+ +H Y+ +N + ++ + LIDMY KCG L+ A + F+ N K+++
Sbjct: 243 ACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKV 302
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
WN+MI FA+HG+S+ +I VFE+M + + P+ VTF++LLNAC+HG VE+GR Y
Sbjct: 303 WPWNAMIGGFAVHGKSKEAIEVFEQM---KIEKVSPNKVTFVALLNACSHGNRVEEGRYY 359
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
F+ M YR++P++EHYGCLVDLLGRAGR +EA E++ M + PD +WG+LL+ CKI+
Sbjct: 360 FESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIHK 419
Query: 437 RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWI 496
+ E K + E+DPN+ G ++LANIY G W+E R +R+ + + KTPGCS I
Sbjct: 420 DAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTPGCSSI 479
Query: 497 EVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
E++ HQF D++HP+T+++Y L+ M+
Sbjct: 480 ELNGMFHQFLVGDRSHPQTKQLYLFLDEMI 509
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/512 (40%), Positives = 314/512 (61%), Gaps = 14/512 (2%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
++ +++++ + HL Q+ + L G FKL R L L + F+F+
Sbjct: 48 ERFASLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQR-SYAALGRLDCSVFVFNTFD 106
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
PN + ++A+I ++ Q AF Y M+ G +PN F + VLKSC LES
Sbjct: 107 EPNVFSFSAIIHSHV-QSRLFDRAFGYYSQMLSCG-VEPNAFTFSSVLKSCS--LES--G 160
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
K++H Q +K G V T LV+ Y+R G D+ AR+LFD+M +R++VS T M++ Y++
Sbjct: 161 KVLHCQAIKLGLGSDLYVRTGLVDVYAR-GGDVVCARQLFDKMPERSLVSLTTMLTCYSK 219
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
+G++ A SLF+ M +RDV WN +I G Q+G+ ++++ FRRM V+ I PN+VT+
Sbjct: 220 MGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRM--LVAKAI-PNEVTV 276
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
+ LSA G G L+ G+ IH Y+ G+ ++ + ALIDMY KCGSL++AR FDR
Sbjct: 277 LAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRD 336
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K + +WNSMI +A+HG S++++ +FEEM + +P +TFI +L+AC HGGLVE+G
Sbjct: 337 KDVVAWNSMIVGYAMHGFSQHALQLFEEM---TETGHKPTDITFIGILSACGHGGLVEEG 393
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
R++F+LM Y IEP+IEHYGC+V+LLGRAG EEA +VK M I D V+WG+LL C+
Sbjct: 394 RSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCR 453
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
++ E K L++ N G ++L+N+Y G W+ V K+R ++K+ K GC
Sbjct: 454 LHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGC 513
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
S IEVD +VH+F + ++ HP+++EIY L +
Sbjct: 514 SSIEVDNKVHEFVAGERKHPKSKEIYVMLNEI 545
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/524 (37%), Positives = 305/524 (58%), Gaps = 17/524 (3%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
L ++A L C L + L SQ+++ A ++V C A +F
Sbjct: 9 LEDAIIARLRTCATFRDLLRAHGLAVRLCLSQSSYVATQIVHICNAHGRAAHAA-RVFAQ 67
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQP--------NQFIYPHVLKS 123
+ PN +L+ AMI AYA H A +Y M+R P P ++F YP +LK+
Sbjct: 68 IPAPNLHLHNAMIKAYAQNHLH-RDAVEVYVRMLR-CLPHPSTAGFSVGDRFTYPFLLKA 125
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
C + SR + VH + +SG E + VV+ +L+ Y+R G D+ ARK FD M +++VVS
Sbjct: 126 CGALAASRLGRQVHAHVARSGCESHAVVQNSLIEMYTRCG-DLSTARKAFDGMREKDVVS 184
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
W +IS + R+G ++ A LF SMPD+ V +W ++++G T G F+ A+ FR M ME
Sbjct: 185 WNTLISAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQME-- 242
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
P+ V++V L A G L+LG+ I+ Y ++G+ +I NAL++MY KCG ++E
Sbjct: 243 -GFEPDDVSIVAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEE 301
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A + F S+K + SW++ I A HG++ ++ +FE M R + + P+G+TF+ LL+A
Sbjct: 302 ALQLFHGMSEKDVISWSTAIGGLAAHGRAREAVRLFEVMDR--EGRVMPNGITFVGLLSA 359
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C+H GLV++G Y M + Y +EP +EHYGC+VDLLGR+GR + AL+ ++GM + PD
Sbjct: 360 CSHAGLVDEGLRYLDQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVPPDGK 419
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+WGSLL+ C+ +G + A A ++L+E++P + G +MLAN+YG G+W EV RK ++
Sbjct: 420 IWGSLLSACRSHGDVETAVVAAERLVELEPGDVGNLVMLANVYGAAGRWGEVASTRKEIR 479
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
R+ KTPGCS IEVD V +F + P I L+ + +
Sbjct: 480 SRSTRKTPGCSMIEVDNVVREFVAGQDLGPELGGIATVLDILAS 523
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/528 (37%), Positives = 307/528 (58%), Gaps = 21/528 (3%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
L +A L C L + L SQ+++ A ++V C +A +F H
Sbjct: 9 LEDAAIARLRACATFRDLLRAHGLAVRLCLSQSSYVATQIVHVCNGH-GRAAHAARVFAH 67
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQP---------NQFIYPHVLK 122
+ PN +L+ AMI AYA H A +Y M+R P P ++F YP +LK
Sbjct: 68 VPAPNLHLHNAMIKAYAQNHLH-RDAVEVYVRMLR-CLPDPSSSGGFSVGDRFTYPFLLK 125
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
+C + S+ + VH + +SG E + +V+ +L+ Y+R G D+ +ARK+FD M +++ V
Sbjct: 126 ACGGLAASQLGRQVHAHVARSGCESHAIVQNSLIEMYTRCG-DLSLARKVFDGMREKDAV 184
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
SW +IS + R+G ++ A LF SMPD+ V +W ++++G T G F+ A+ FR+M ME
Sbjct: 185 SWNTLISAHARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQMQME- 243
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
P+ V++V L A G L+LG+ I+ Y ++G+ +I NAL++MY KCG ++
Sbjct: 244 --GFEPDDVSIVAVLPACAQLGALELGRWIYAYCNKHGMLGKIYICNALMEMYAKCGCIE 301
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
EA + F S+K + SW++ I A HG++ ++ +FE M R + + P+G+TF+ LL+
Sbjct: 302 EALQLFHGMSEKDVISWSTAIGGLAAHGRAREAVKLFEVMDR--EGRVMPNGITFVGLLS 359
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H GL+++G YF M + Y +EP +EHYGC+VDLLGR+GR + AL+ + GM I PD
Sbjct: 360 ACSHAGLLDEGLRYFDRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMPIPPDG 419
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
+WGSLL+ C+ + D A A ++L+E++P + G +MLAN+Y G+W V RK +
Sbjct: 420 KIWGSLLSACRSHSDVDTAVVAAERLVELEPEDVGNLVMLANVYAAAGRWGNVASTRKEI 479
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPR---TEEIYDALESMVA 527
+ R+ KTPGCS IEVD V +F + + P I D L S +A
Sbjct: 480 RSRSTRKTPGCSMIEVDNVVREFVAGEDLGPELGGIAAIIDILASQLA 527
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/537 (35%), Positives = 317/537 (59%), Gaps = 19/537 (3%)
Query: 1 MVSVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS 60
M + + + V+A L C L ++ + L SQ+++ A ++V C
Sbjct: 1 MALAPSSATRQVEDAVMASLRACASFRDLLRVHAHAVRLSLSQSSYLATQIVHLCNAH-G 59
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQP-------N 113
+ +A +F + PN +L+ AMI AYA H A ++Y M+RR +P P +
Sbjct: 60 RVAHATRVFSQVREPNLHLHNAMIKAYAQNHRHLD-AITVYIRMLRR-RPFPWISCTGGD 117
Query: 114 QFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLF 173
+F YP +LK+C ++ K VH +V+SG E +V+ +L+ Y+R+G D+ +ARK+F
Sbjct: 118 RFTYPFLLKACGGLMALDLGKQVHGHVVRSGCESNAIVQNSLIEMYTRAG-DLVLARKVF 176
Query: 174 DEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
D M +R+VVSW +IS + R+G ++ A ++F+SMPD+ V +W ++++G T G FS A+
Sbjct: 177 DGMQERDVVSWNTVISAHARLGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVE 236
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
FR M ME P+ V++V L A G L+LG+ I+ Y R+ + ++++ NAL++
Sbjct: 237 AFRLMQME---GFEPDDVSIVAVLPACAQLGALELGRWIYAYCNRHQMLRETYVCNALVE 293
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
MY KCG + +A + F+ ++K + SW++M+ A HG+++ ++ +F EM R ++P+
Sbjct: 294 MYAKCGCIDQALQLFNGMAEKDVISWSTMVGGLAAHGRAQEAVQLFTEMER--QGTVKPN 351
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
G+TF+ LL+AC+H GL+++G YF M Y IEP +EHYGC+VDLL R+G+ + L+++
Sbjct: 352 GITFVGLLSACSHAGLLDEGLDYFDRMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDLI 411
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
M + D +WGS+LN C+ +G D A A ++L+ ++P + G +MLAN+Y +W
Sbjct: 412 SDMPLPADAKIWGSVLNACRSHGDVDTAVLAAERLVALEPEDVGNLVMLANVYAAARRWS 471
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPR---TEEIYDALESMVA 527
EV RK ++ R+ KTPGCS IEVD V +F + + P + D L S +A
Sbjct: 472 EVANTRKAIRSRSMRKTPGCSLIEVDNVVQEFVAGEDLKPEFGGLSGVLDILASQLA 528
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/579 (35%), Positives = 311/579 (53%), Gaps = 69/579 (11%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFI 68
++ L ++ +++L+ C + Q+Q+ + G + KLV C L +TYAR +
Sbjct: 34 HRLLEERFISLLQSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICA-TLKRMTYARQL 92
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
FD + PN L+ +M YA ++ F ++ ++ +PN F +P VLKSC +
Sbjct: 93 FDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQ--MKGMDIRPNCFTFPVVLKSCGKIN 150
Query: 129 ESRGTKMVHTQIVKSGFEQYP-------------------------------VVETALVN 157
+ VH ++K GF P V T+++N
Sbjct: 151 ALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMIN 210
Query: 158 SYSRS------------------------------GNDIGIARKLFDEMSDRNVVSWTAM 187
Y S G D+ ARKLF EM +R+V+ W +
Sbjct: 211 GYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTV 270
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
+ GY G+++ LF+ MP+R++ +WN++I G NGLF + + F+RM E ++
Sbjct: 271 LKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSE--SDVP 328
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
PN TLV LSA G L LGK +H Y +GL + ++ NAL+DMY KCG ++ A
Sbjct: 329 PNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISV 388
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F K L SWN++I A+H + +++ +F +M ++ +PDG+TFI +L ACTH
Sbjct: 389 FRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQM---KNAGQKPDGITFIGILCACTHM 445
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GLVE G AYF+ M Y I PQIEHYGC+VD+L RAGR E+A+ V+ M +E D V+W
Sbjct: 446 GLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAG 505
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LL C+IY + AE A+++LIE++P N +ML+NIYG+ G+W++V +++ ++D
Sbjct: 506 LLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGF 565
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K PGCS IEV+ V +F+SLD+ HP+ EEIY L +V
Sbjct: 566 KKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLV 604
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/501 (39%), Positives = 304/501 (60%), Gaps = 14/501 (2%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMIT 85
+N LKQ+Q++ G T K + L++ ++ YA +FD + P +LY +I
Sbjct: 1 MNRLKQIQAYTLRNGIEHT-----KQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQ 55
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
AY+S H FSLY M +G PN+ + + +C + + +M+HT VKSGF
Sbjct: 56 AYSSHGPH-HQCFSLYTQMCLQG-CSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGF 113
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
TALV+ Y++ G + +ARK FDEM+ R+V +W +MI+GY R GD++ A LF
Sbjct: 114 GCDVFALTALVDMYAKLGL-LSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFR 172
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
MP R+V +W ++I+G QNG ++ A+S F + ME +RPN+VTL L A + G
Sbjct: 173 LMPARNVTSWTAMISGYAQNGQYAKALSMF--LMMEEETEMRPNEVTLASVLPACANLGA 230
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR-NSKKRLTSWNSMIN 324
L++G+ I Y NG + ++SNAL++MY +CG + +A F+ + ++ L SWNSMI
Sbjct: 231 LEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIM 290
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
A+HG+ + +I +F +M+R PD VTF+ +L ACTHGG+V +G+ +F+ M + +
Sbjct: 291 GLAVHGRCDEAIELFYKMLR---EGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDF 347
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
I P++EHYGC+VDLLGRAG EA +++ M +EPD VVWG+LL C +G + AE A
Sbjct: 348 SIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKA 407
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
L E++P+N G ++L+NIY G+WD V ++RK++K K G S+IE +H+
Sbjct: 408 AGALFELEPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHK 467
Query: 505 FHSLDKTHPRTEEIYDALESM 525
F D++H R++EIY L+ +
Sbjct: 468 FIVEDRSHSRSDEIYALLDEV 488
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/595 (35%), Positives = 314/595 (52%), Gaps = 77/595 (12%)
Query: 5 TNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTY 64
+ L++ + + +++L C L Q+Q+ + T G ++ + C +L +
Sbjct: 14 SKPLHRVVEDKFISLLRTCGTCVRLHQIQAQIVTHGLEGNDYVTPSFITACA-RLGGIRR 72
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD PN + AM YA H R + R PN F +P V+KSC
Sbjct: 73 ARRVFDKTAQPNGATWNAMFRGYAQANCHLDVVVLFAR--MHRAGASPNCFTFPMVVKSC 130
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYS-RSGNDIGIARKLFDEMSDRNVVS 183
++ + VH + K GF+ V AL++ YS R G + A K+F EM D+NV +
Sbjct: 131 ATANAAKEGEEVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMRDKNVFA 190
Query: 184 WTAMI-------------------------------SGYTRVGDIKNAASLFDSMPDRDV 212
WTA++ SGY +GD+ A LFD MPDRDV
Sbjct: 191 WTAIVAAHVACRDMVSARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARELFDRMPDRDV 250
Query: 213 PAWNSV-------------------------------IAGCTQNGLFSDAISFFRRM--- 238
+WN+V I G +NGLF +A+ F+RM
Sbjct: 251 MSWNTVLSGYATNGEVESFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLVL 310
Query: 239 ----GMEVSDNIR-PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
G E SD + PN T+V L+A G L++GK +H Y G + F+ NALID
Sbjct: 311 VEGEGKEGSDGVVVPNDYTVVAVLTACSRLGDLEMGKWVHVYAESIGYKGNLFVGNALID 370
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
MY KCG +++A FD K + +WN++IN A+HG +++ +FE M R + RPD
Sbjct: 371 MYAKCGVIEKALDVFDGLDVKDIITWNTIINGLAMHGHVADALSLFERMKRAGE---RPD 427
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
GVTF+ +L+ACTH GLV G +F+ M Y I PQIEHYGC+VDLLGRAG ++A+++V
Sbjct: 428 GVTFVGILSACTHMGLVRNGLLHFQSMVDDYSIVPQIEHYGCMVDLLGRAGLIDKAVDIV 487
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
+ M +EPD V+W +LL C++Y + AE A+++LIE++PNN G +M++NIY +LG+
Sbjct: 488 RKMPMEPDAVIWAALLGACRMYKNVEMAELALQRLIELEPNNPGNFVMVSNIYKDLGRSQ 547
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
+V +++ ++D K PGCS I + + +F+SLD+ HP T+ IY AL+ + L
Sbjct: 548 DVARLKVAMRDTGFRKVPGCSVIGCNDSMVEFYSLDERHPETDSIYRALQGLTIL 602
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/547 (36%), Positives = 309/547 (56%), Gaps = 41/547 (7%)
Query: 11 TLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFD 70
+ Q +L ++ C+ IN L L + + Q F + + + L+++ Y F F
Sbjct: 37 SFKQTLLNRIKNCSTINELHGLCASMIKTNAIQDCFLVHQFIS-ASFALNSVHYPVFAFT 95
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ PN ++Y AMI + + A Y M+ P + + ++K+C +
Sbjct: 96 QMENPNVFVYNAMIKGFV-YCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAV 154
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
+MVH I K GFE + V+TALV+ YS+ + ARK+FDEM +R+ +WTAM+S
Sbjct: 155 ELGQMVHCHIWKKGFESHLFVQTALVDFYSKL-EILSEARKVFDEMCERDAFAWTAMLSA 213
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCT--------------------------- 223
RVGD+ +A LF+ MP+R+ WN++I G T
Sbjct: 214 LARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMI 273
Query: 224 ----QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN 279
QN + DA++ + M + + I P++VT+ SA H G L+LGK IH YV
Sbjct: 274 TCYSQNKQYQDALAIYSEMRL---NGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQ 330
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
GL+LD +I +AL+DMY KCGSL + F + + K L WN++I A+HG +E ++ +F
Sbjct: 331 GLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMF 390
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
M R I P+GVTFIS+L+ACTH GLV++GR+ F MT+ Y I P I HYGC+VD+
Sbjct: 391 AIMER---EKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDM 447
Query: 400 LGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYG 459
L ++G EALE++K M+ EP+ ++WG+LLNGCK++G + AE AV++L+ ++P N G+
Sbjct: 448 LSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHY 507
Query: 460 IMLANIYGELGKWDEVRKVRKMLKDRNAYKT-PGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
+L ++Y E W EV +R M+K++ K PG SWIE++ +HQF + +HP +++I
Sbjct: 508 NLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKI 567
Query: 519 YDALESM 525
Y L +
Sbjct: 568 YFILTEL 574
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/547 (36%), Positives = 310/547 (56%), Gaps = 41/547 (7%)
Query: 11 TLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFD 70
+ Q +L ++ C+ IN L L + + Q F + + + L+++ Y F F
Sbjct: 134 SFKQTLLNRIKNCSTINELHGLCASMIKTNAIQDCFLVHQFIS-ASFALNSVHYPVFAFT 192
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ PN ++Y AMI + + A Y M+ P + + ++K+C +
Sbjct: 193 QMENPNVFVYNAMIKGFV-YCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAV 251
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
+MVH I K GFE + V+TALV+ YS+ + ARK+FDEM +R+ +WTAM+S
Sbjct: 252 ELGQMVHCHIWKKGFESHLFVQTALVDFYSKL-EILSEARKVFDEMCERDAFAWTAMVSA 310
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAG----------------------------- 221
RVGD+ +A LF+ MP+R+ WN++I G
Sbjct: 311 LARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMI 370
Query: 222 -C-TQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN 279
C +QN + DA++ + M + + I P++VT+ SA H G L+LGK IH YV
Sbjct: 371 TCYSQNKQYQDALAIYSEMRL---NGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQ 427
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
GL+LD +I +AL+DMY KCGSL + F + + K L WN++I A+HG +E ++ +F
Sbjct: 428 GLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMF 487
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
M R I P+GVTFIS+L+ACTH GLV++GR+ F MT+ Y I P I HYGC+VD+
Sbjct: 488 AIMER---EKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDM 544
Query: 400 LGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYG 459
L ++G EALE++K M+ EP+ ++WG+LLNGCK++G + AE AV++L+ ++P N G+
Sbjct: 545 LSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHY 604
Query: 460 IMLANIYGELGKWDEVRKVRKMLKDRNAYKT-PGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
+L ++Y E W EV +R M+K++ K PG SWIE++ +HQF + +HP +++I
Sbjct: 605 NLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKI 664
Query: 519 YDALESM 525
Y L +
Sbjct: 665 YFVLTEL 671
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/525 (38%), Positives = 317/525 (60%), Gaps = 20/525 (3%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT-LKLSNLTYARFI 68
+ L ++++IL C + +KQ+ + + G SQ ++ KL+R T + + +Y +
Sbjct: 39 KLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLV 98
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
F + PN +L+TAMI YA Q S + + Y M RR P F + + K+C L
Sbjct: 99 FGQVNYPNPFLWTAMIRGYALQ-GLLSESTNFYTRM-RRDGVGPVSFTFSALFKACGAAL 156
Query: 129 ESRGTKMVHTQ-IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
K VH Q I+ GF V ++++ Y + G +G ARK+FDEMS+R+VVSWT +
Sbjct: 157 NMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGF-LGCARKVFDEMSERDVVSWTEL 215
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM---GMEVSD 244
I Y + GD+++A+ LFD +P +D+ AW +++ G QNG +A+ +F++M GME
Sbjct: 216 IVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMET-- 273
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS--FISNALIDMYGKCGSLK 302
++VTL +SA G ++ I R+G + +ALIDMY KCGS
Sbjct: 274 ----DEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPD 329
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
EA + F+ ++ + S++SMI +A+HG++ +++ +F +M++ + IRP+ VTFI +L+
Sbjct: 330 EAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTE---IRPNKVTFIGILS 386
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H GLVEQGR F M K + + P +HY C+VDLLGRAG EEAL++VK M +EP+
Sbjct: 387 ACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNG 446
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
VWG+LL C+I+G D A+ A +L +++PN G I+L+NIY G+W+EV K+RK++
Sbjct: 447 GVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVI 506
Query: 483 KDRNAYKTPGCSWIE-VDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+++ K PGCSW E + ++H F + D THPR+ EI AL+ ++
Sbjct: 507 REKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLI 551
>gi|297806919|ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317180|gb|EFH47602.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/505 (38%), Positives = 308/505 (60%), Gaps = 21/505 (4%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMIT 85
+N +KQL + G +T +L L + NL YAR +FD P +LY +I
Sbjct: 1 MNQIKQLHAHCLRTGVDETKDLLQRL-----LLIPNLVYARKLFDLHRNPCIFLYNKLIQ 55
Query: 86 AYA--SQPAHASSAFSLYR-DMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVK 142
+Y+ QP + ++L D +R PN + + + +R +++H+Q +
Sbjct: 56 SYSVHHQPHESIVLYNLLSFDGIR-----PNHHTFNFIFAASASFSSARPLRLLHSQFFR 110
Query: 143 SGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAAS 202
SGFE TAL+ +Y++ G + AR++FDEMS+R+V W AMI+GY R GD+K A
Sbjct: 111 SGFESDSFCCTALITAYAKLGA-LCCARRVFDEMSNRDVPVWNAMITGYQRRGDMKAAME 169
Query: 203 LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGH 262
LFDSMP+++V +W +VI+G +QNG +S+A++ F + ME +++PN +TLV L A +
Sbjct: 170 LFDSMPNKNVTSWTTVISGFSQNGNYSEALTMF--LCMEKDKSVKPNHITLVSVLPACAN 227
Query: 263 TGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR-LTSWNS 321
G L++G+ + GY NG + ++ NA ++MY KCG + A+R FD +R L SWNS
Sbjct: 228 LGELEIGRRLEGYARENGFFDNIYVRNATLEMYSKCGMIDVAKRLFDEIGNQRNLISWNS 287
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
MI S A HG+ + ++ ++ +M++ RPD VTF+ LL AC HGG+V +G+ K M
Sbjct: 288 MIGSLATHGKHDEALELYAQMLQ---EGERPDAVTFVGLLLACVHGGMVLKGKELLKSME 344
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+ ++I P++EHYGC++DLLGR G+ +EA +++K M ++PD VVWG+LL C +G + A
Sbjct: 345 EVHKISPKLEHYGCMIDLLGRVGKLQEACDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
Query: 442 EFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW-IEVDK 500
E A + L++++P N G ++++NIY KWD V ++RK++K K G S+ +E
Sbjct: 405 EIASEALMKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEAGV 464
Query: 501 QVHQFHSLDKTHPRTEEIYDALESM 525
+VH+F DK+HPR+ EIY L+ +
Sbjct: 465 EVHKFTVEDKSHPRSYEIYQVLDEI 489
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/586 (34%), Positives = 316/586 (53%), Gaps = 69/586 (11%)
Query: 4 VTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLT 63
V N + + + ++ + +L C + L Q+Q+ + T G +F A + C+ + +
Sbjct: 3 VLNPVQRIVEEKFITLLRSCKNYERLHQIQAQIVTHGLEHNDFVAPNFITTCS-RFKRIH 61
Query: 64 YARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
+AR +FD + PNT + AM Y Q H L+ ++ R PN F +P ++KS
Sbjct: 62 HARKLFDKIPQPNTATWNAMFRGYL-QNGHHRDTVVLFGEL-NRIAGMPNCFTFPMIIKS 119
Query: 124 CPDVLESRGTKMVHTQIVKSGF-------------------------------EQYPVVE 152
C + R + VH K GF E+ VV
Sbjct: 120 CGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVW 179
Query: 153 TALVNSYSRSGN------------------------------DIGIARKLFDEMSDRNVV 182
TA++N Y G+ ++ AR+LFD+M +R+ +
Sbjct: 180 TAIINGYILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTM 239
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
SW AM++GY G+++ +FD MP+R+V +WN +I G +NGLFS+ + F+RM +E
Sbjct: 240 SWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVE- 298
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
++ PN TLV LSA G L +GK +H Y G + F+ N LIDMY KCG ++
Sbjct: 299 -GHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIE 357
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
A F+ +K + SWN++IN A+HG + +++ +F+ M + PDGVTF+ +L+
Sbjct: 358 NAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRM---KSEGEEPDGVTFVGILS 414
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
ACTH GLV+ G YFK M Y I PQIEHYGC+VDLLGRAG ++AL ++ M IEPD
Sbjct: 415 ACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDA 474
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
V+W +LL C++Y + AE A+++LIE++PNN +M++NIY +LG+ ++V +++ +
Sbjct: 475 VIWAALLGACRLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAM 534
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
+D K PGCS IE + V +F+SLD+ H TE IY L+ + L
Sbjct: 535 RDTGFRKLPGCSVIECNDSVVEFYSLDERHSETESIYRVLKGLTML 580
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/525 (38%), Positives = 317/525 (60%), Gaps = 20/525 (3%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT-LKLSNLTYARFI 68
+ L ++++IL C + +KQ+ + + G SQ ++ KL+R T + + +Y +
Sbjct: 39 KLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLV 98
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
F + PN +L+TAMI YA Q S + + Y M RR P F + + K+C L
Sbjct: 99 FGQVNYPNPFLWTAMIRGYALQ-GLLSESTNFYTRM-RRDGVGPVSFTFSALFKACGAAL 156
Query: 129 ESRGTKMVHTQ-IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
K VH Q I+ GF V ++++ Y + G +G ARK+FDEMS+R+VVSWT +
Sbjct: 157 NMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGF-LGCARKVFDEMSERDVVSWTEL 215
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM---GMEVSD 244
I Y + GD+++A+ LFD +P +D+ AW +++ G QNG +A+ +F++M GME
Sbjct: 216 IVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMET-- 273
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS--FISNALIDMYGKCGSLK 302
++VTL +SA G ++ I R+G + +ALIDMY KCGS
Sbjct: 274 ----DEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPD 329
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
EA + F+ ++ + S++SMI +A+HG++ +++ +F +M++ + IRP+ VTFI +L+
Sbjct: 330 EAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTE---IRPNKVTFIGILS 386
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H GLVEQGR F M K + + P +HY C+VDLLGRAG EEAL++VK M +EP+
Sbjct: 387 ACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNG 446
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
VWG+LL C+I+G D A+ A +L +++PN G I+L+NIY G+W+EV K+RK++
Sbjct: 447 GVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVI 506
Query: 483 KDRNAYKTPGCSWIE-VDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+++ K PGCSW E + ++H F + D THPR+ EI AL+ ++
Sbjct: 507 REKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLI 551
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/501 (38%), Positives = 295/501 (58%), Gaps = 13/501 (2%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMIT 85
+ +KQ+ + G QT KL L++ NL YA + H P +LY +I
Sbjct: 1 MRQVKQIHGYTLRNGIDQTKILIEKL-----LEIPNLHYAHKVLHHSPKPTLFLYNKLIQ 55
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
AY+S P H FSLY M+ PNQ + + +C + +M+HT +KSGF
Sbjct: 56 AYSSHPQHQHQCFSLYSQMLLHSF-LPNQHTFNFLFSACTSLSSPSLGQMLHTHFIKSGF 114
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
E TAL++ Y++ G + +ARKLFD+M R V +W AM++G+ R GD+ A LF
Sbjct: 115 EPDLFAATALLDMYTKVGT-LELARKLFDQMPVRGVPTWNAMMAGHARFGDMDVALELFR 173
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
MP R+V +W ++I+G +++ + +A+ F RM E + PN VTL A + G
Sbjct: 174 LMPSRNVVSWTTMISGYSRSKKYGEALGLFLRM--EQEKGMMPNAVTLASIFPAFANLGA 231
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR-NSKKRLTSWNSMIN 324
L++G+ + Y +NG + ++SNA+++MY KCG + A + F+ S + L SWNSMI
Sbjct: 232 LEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIM 291
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
A+HG+ ++ ++++M+ PD VTF+ LL ACTHGG+VE+GR FK MT ++
Sbjct: 292 GLAVHGECCKTLKLYDQML---GEGTSPDDVTFVGLLLACTHGGMVEKGRHIFKSMTTSF 348
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
I P++EHYGC+VDLLGRAG+ EA EV++ M ++PD V+WG+LL C + + AE A
Sbjct: 349 NIIPKLEHYGCMVDLLGRAGQLREAYEVIQRMPMKPDSVIWGALLGACSFHDNVELAEIA 408
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
+ L ++P N G ++L+NIY G+WD V K+RK++K K+ G S+IE Q+H+
Sbjct: 409 AESLFALEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSAGHSFIEEGGQLHK 468
Query: 505 FHSLDKTHPRTEEIYDALESM 525
F D++HP + EI+ L+ +
Sbjct: 469 FIVEDRSHPESNEIFALLDGV 489
>gi|15241651|ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510
gi|9759345|dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana]
gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis thaliana]
gi|332003930|gb|AED91313.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 511
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/505 (38%), Positives = 304/505 (60%), Gaps = 21/505 (4%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMIT 85
+N +KQL + G +T +L L + NL YAR +FDH T+LY +I
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRL-----LLIPNLVYARKLFDHHQNSCTFLYNKLIQ 55
Query: 86 AY--ASQPAHASSAFSLYR-DMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVK 142
AY QP + ++L D +R P+ + + + +R +++H+Q +
Sbjct: 56 AYYVHHQPHESIVLYNLLSFDGLR-----PSHHTFNFIFAASASFSSARPLRLLHSQFFR 110
Query: 143 SGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAAS 202
SGFE T L+ +Y++ G + AR++FDEMS R+V W AMI+GY R GD+K A
Sbjct: 111 SGFESDSFCCTTLITAYAKLGA-LCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAME 169
Query: 203 LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGH 262
LFDSMP ++V +W +VI+G +QNG +S+A+ F + ME +++PN +T+V L A +
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMF--LCMEKDKSVKPNHITVVSVLPACAN 227
Query: 263 TGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR-LTSWNS 321
G L++G+ + GY NG + ++ NA I+MY KCG + A+R F+ +R L SWNS
Sbjct: 228 LGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNS 287
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
MI S A HG+ + ++ +F +M+R +PD VTF+ LL AC HGG+V +G+ FK M
Sbjct: 288 MIGSLATHGKHDEALTLFAQMLR---EGEKPDAVTFVGLLLACVHGGMVVKGQELFKSME 344
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+ ++I P++EHYGC++DLLGR G+ +EA +++K M ++PD VVWG+LL C +G + A
Sbjct: 345 EVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
Query: 442 EFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW-IEVDK 500
E A + L +++P N G ++++NIY KWD V ++RK++K K G S+ +EV
Sbjct: 405 EIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGV 464
Query: 501 QVHQFHSLDKTHPRTEEIYDALESM 525
VH+F DK+HPR+ EIY LE +
Sbjct: 465 DVHKFTVEDKSHPRSYEIYQVLEEI 489
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/458 (40%), Positives = 290/458 (63%), Gaps = 14/458 (3%)
Query: 71 HLTTPNTYLYTAMIT--AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
++ N + + ++I A + A AFS R + +PN+ +P +KSC +L
Sbjct: 35 YVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKL----SLKPNRSTFPCAIKSCSALL 90
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ + H Q + GFE V +ALV+ YS+ G ++ AR LFDE+S RN+VSWT+MI
Sbjct: 91 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCG-ELRDARTLFDEISHRNIVSWTSMI 149
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD-NIR 247
+GY + D A +FD M +RDV +WNS+IA QNG+ ++++ F RM V D I
Sbjct: 150 TGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRM---VKDGEIN 206
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
N VTL L A H+G +LGK IH V + GL+ + F+ ++IDMY KCG ++ AR+A
Sbjct: 207 YNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKA 266
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FDR +K + SW++M+ + +HG ++ ++ VF EM ++P+ +TF+S+L AC+H
Sbjct: 267 FDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMA---GVKPNYITFVSVLAACSHA 323
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GL+E+G +FK M+ + +EP +EHYGC+VDLLGRAG +EA +++KGMK+ PD VVWG+
Sbjct: 324 GLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGA 383
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LL C+++ D E + +KL E+DP N GY ++L+NIY + G+W++V ++R ++K+
Sbjct: 384 LLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGL 443
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PG S +++ +VH F D+ HP+ E+IY+ LE +
Sbjct: 444 VKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKL 481
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 106/244 (43%), Gaps = 37/244 (15%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYA----------------------------- 88
K L AR +FD ++ N +T+MIT Y
Sbjct: 123 KCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAV 182
Query: 89 -SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQ 147
+Q ++ + ++ MV+ G+ N VL +C R K +H Q++K G E
Sbjct: 183 YAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLES 242
Query: 148 YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM 207
V T++++ Y + G + +ARK FD M ++NV SW+AM++GY G K A +F M
Sbjct: 243 NVFVGTSIIDMYCKCGK-VEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEM 301
Query: 208 PDRDVP----AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHT 263
V + SV+A C+ GL + +F+ M E ++ P C + +G
Sbjct: 302 NMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEF--DVEPGVEHYGCMVDLLGRA 359
Query: 264 GMLQ 267
G L+
Sbjct: 360 GYLK 363
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/502 (36%), Positives = 301/502 (59%), Gaps = 14/502 (2%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
+ L V+A L C L ++ + L SQ+++ A ++V C +T+A +F
Sbjct: 11 RQLEDAVMARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAH-RRVTHAARVF 69
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVR------RGQPQPNQFIYPHVLKS 123
+ PN +L+ AMI AYA H A ++Y M+R G ++F YP +LK+
Sbjct: 70 AQVRDPNLHLHNAMIKAYAQNHQH-RDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKA 128
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
C K VHT +V+SG + +V+ +L+ Y+R+G D+ +A K+FDEM +R+VVS
Sbjct: 129 CGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAG-DLALAHKVFDEMRERDVVS 187
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
W +IS + R+G ++ A +LF+SMPD+ + W ++++G T G + A+ FR M E
Sbjct: 188 WNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTE-- 245
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
P+ V++V L A G L+LG+ I+ Y R+G+ + I NAL++MY KCG + +
Sbjct: 246 -GFEPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQ 304
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A + FD + K + SW+++I A HG++ ++ +F EM + + +RP+ +TF+ LL+A
Sbjct: 305 ALQLFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEK--EGKVRPNVITFVGLLSA 362
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C++ GLV++G ++F M Y +EP +EHYGC+VDLLGR+G+ AL++V+ M + D
Sbjct: 363 CSYAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAK 422
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
VWGSLL+ C+ +G D A A ++L+E++P++ G +MLAN+Y +W +V RK ++
Sbjct: 423 VWGSLLSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIR 482
Query: 484 DRNAYKTPGCSWIEVDKQVHQF 505
R+ KTPGCS IEV V +F
Sbjct: 483 SRSMRKTPGCSLIEVGNVVREF 504
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/467 (41%), Positives = 287/467 (61%), Gaps = 13/467 (2%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L L Y+ +F P+ + +TA+I +A + H A + Y M+ +G +PN F +
Sbjct: 22 LGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLH-EQALNFYAQMLTQGV-EPNAFTFS 79
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
+LK CP K +H+Q VK GF+ V T L++ Y+R G D+ A++LFD M +
Sbjct: 80 SILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGG-DVVSAQQLFDTMPE 134
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
+++VS TAM++ Y + G++ A LFD M +RD WN +I G TQNG+ ++A+ FRRM
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
+ +PN+VT++ LSA G G L+ G+ +H Y+ NG+ + + AL+DMY KC
Sbjct: 195 ---LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKC 251
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
GSL++AR FD+ K + +WNSMI +A+ G S+ ++ +F+ M R H P +TFI
Sbjct: 252 GSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLH---PTNITFI 308
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
+L+AC H G V +G F M Y IEP+IEHYGC+V+LLGRAG E+A E+VK M I
Sbjct: 309 GILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNI 368
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
EPD V+WG+LL C+++G+ E V+ L++ + N G I+L+NIY +G WD V ++
Sbjct: 369 EPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARL 428
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
R M+KD K PGCS IEV+ +VH+F + HP+ +EIY LE +
Sbjct: 429 RTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEI 475
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 126/287 (43%), Gaps = 46/287 (16%)
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y +G + + +LF + V W ++I G GL A++F+ +M ++ + PN
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQM---LTQGVEPNA 75
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
T S+I ++ GK +H + G D D ++ L+D+Y + G + A++ FD
Sbjct: 76 FT----FSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDT 131
Query: 311 NSKKRLTS-------------------------------WNSMINSFALHGQSENSICVF 339
+K L S WN MI+ + +G ++ +F
Sbjct: 132 MPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLF 191
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
M++ + +P+ VT +S+L+AC G +E GR + + I+ + LVD+
Sbjct: 192 RRMLKAK---AKPNEVTVLSVLSACGQLGALESGR-WVHSYIENNGIQFNVHVGTALVDM 247
Query: 400 LGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
+ G E+A V + + D V W S++ G Y F++ A++
Sbjct: 248 YSKCGSLEDARLVFDKID-DKDVVAWNSMIVG---YAMXGFSQEALQ 290
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/500 (37%), Positives = 300/500 (60%), Gaps = 14/500 (2%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
L V+A L C L ++ + L SQ+++ A ++V C +T+A +F
Sbjct: 13 LEDAVMARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAH-RRVTHAARVFAQ 71
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVR------RGQPQPNQFIYPHVLKSCP 125
+ PN +L+ AMI AYA H A ++Y M+R G ++F YP +LK+C
Sbjct: 72 VRDPNLHLHNAMIKAYAQNHQH-RDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACG 130
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
K VHT +V+SG + +V+ +L+ Y+R+G D+ +A K+FDEM +R+VVSW
Sbjct: 131 GTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAG-DLALAHKVFDEMRERDVVSWN 189
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
+IS + R+G ++ A +LF+SMPD+ + W ++++G T G + A+ FR M E
Sbjct: 190 MLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTE---G 246
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
P+ V++V L A G L+LG+ I+ Y R+G+ + I NAL++MY KCG + +A
Sbjct: 247 FEPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQAL 306
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
+ FD + K + SW+++I A HG++ ++ +F EM + + +RP+ +TF+ LL+AC+
Sbjct: 307 QLFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEK--EGKVRPNVITFVGLLSACS 364
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
+ GLV++G ++F M Y +EP +EHYGC+VDLLGR+G+ AL++V+ M + D VW
Sbjct: 365 YAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVW 424
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
GSLL+ C+ +G D A A ++L+E++P++ G +MLAN+Y +W +V RK ++ R
Sbjct: 425 GSLLSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSR 484
Query: 486 NAYKTPGCSWIEVDKQVHQF 505
+ KTPGCS IEV V +F
Sbjct: 485 SMRKTPGCSLIEVGNVVREF 504
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/500 (37%), Positives = 300/500 (60%), Gaps = 14/500 (2%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
L V+A L C L ++ + L SQ+++ A ++V C +T+A +F
Sbjct: 13 LEDAVMARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAH-RRVTHAARVFAQ 71
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVR------RGQPQPNQFIYPHVLKSCP 125
+ PN +L+ AMI AYA H A ++Y M+R G ++F YP +LK+C
Sbjct: 72 VRDPNLHLHNAMIKAYAQNHQH-RDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACG 130
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
K VHT +V+SG + +V+ +L+ Y+R+G D+ +A K+FDEM +R+VVSW
Sbjct: 131 GTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAG-DLALAHKVFDEMRERDVVSWN 189
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
+IS + R+G ++ A +LF+SMPD+ + W ++++G T G + A+ FR M E
Sbjct: 190 MLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTE---G 246
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
P+ V++V L A G L+LG+ I+ Y R+G+ + I NAL++MY KCG + +A
Sbjct: 247 FEPDDVSIVAVLPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQAL 306
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
+ FD + K + SW+++I A HG++ ++ +F EM + + +RP+ +TF+ LL+AC+
Sbjct: 307 QLFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEK--EGKVRPNVITFVGLLSACS 364
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
+ GLV++G ++F M Y +EP +EHYGC+VDLLGR+G+ AL++V+ M + D VW
Sbjct: 365 YAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVW 424
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
GSLL+ C+ +G D A A ++L+E++P++ G +MLAN+Y +W +V RK ++ R
Sbjct: 425 GSLLSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSR 484
Query: 486 NAYKTPGCSWIEVDKQVHQF 505
+ KTPGCS IEV V +F
Sbjct: 485 SMRKTPGCSLIEVGNVVREF 504
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/448 (42%), Positives = 273/448 (60%), Gaps = 39/448 (8%)
Query: 107 RGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDI 166
+ Q P F + ++K+C V E + VH I K GF+ + V+TALV+ Y +G I
Sbjct: 3 QAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK-I 61
Query: 167 GIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDS-------------------- 206
AR++FDEMS+R+V +WT MIS + R GD+ +A LFD
Sbjct: 62 VEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLR 121
Query: 207 -----------MPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
MP+RD+ +W ++IA +QN F +A++ F M ++ I P++VT+
Sbjct: 122 NVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQ---TNGIDPDEVTMAT 178
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
+SA H G L LGK IH Y G DLD +I +ALIDMY KCGSL ++ F + KK
Sbjct: 179 IISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKN 238
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
L WNS+I A+HG +E ++ +F M R I+P+GVTFIS+L ACTH GLVE+GR
Sbjct: 239 LFCWNSIIEGLAVHGYAEEALAMFSRMQR---EKIKPNGVTFISVLGACTHAGLVEEGRK 295
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
F M++ + I P+IEHYGC+VDLLG+AG E+ALE+V+ M++EP+ V+WG+LL GCK++
Sbjct: 296 RFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLH 355
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT-PGCS 494
A+ AV + ++PNN GY +L N+Y E+ +W EV +R +K+ KT PG S
Sbjct: 356 RNLKIAQVAVNESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPGSS 415
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
WIE+D+++HQF + DK+H ++EIY L
Sbjct: 416 WIEMDRKIHQFAASDKSHLASDEIYTLL 443
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 22/254 (8%)
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
V + P T + A L G+ +HG++++ G D F+ AL+D YG G +
Sbjct: 2 VQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKI 61
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
EARR FD S++ + +W +MI+ A G ++ +F+EM +R + ++ +++
Sbjct: 62 VEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEM------PVR-NTASWNAMI 114
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK---I 418
+ + VE F M I + ++ + +F EAL V M+ I
Sbjct: 115 DGYSRLRNVESAELLFSQMPNR-----DIISWTTMIACYSQNKQFREALAVFNEMQTNGI 169
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAE----FAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
+PDEV ++++ C G D + +A++ ++D G L ++Y + G D+
Sbjct: 170 DPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGS---ALIDMYAKCGSLDK 226
Query: 475 VRKVRKMLKDRNAY 488
V L+ +N +
Sbjct: 227 SLVVFFKLRKKNLF 240
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 136/295 (46%), Gaps = 18/295 (6%)
Query: 42 SQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLY 101
S+ + +A+ + + +++ AR +FD + NT + AMI Y S+ + SA L+
Sbjct: 72 SERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGY-SRLRNVESAELLF 130
Query: 102 RDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSR 161
M P + + ++ + R V ++ +G + V ++++ +
Sbjct: 131 SQM-----PNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAH 185
Query: 162 SGN-DIGIARKLFD-EMS-DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSV 218
G D+G L+ EM D +V +A+I Y + G + + +F + +++ WNS+
Sbjct: 186 LGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSI 245
Query: 219 IAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR 278
I G +G +A++ F RM E I+PN VT + L A H G+++ G+ + R
Sbjct: 246 IEGLAVHGYAEEALAMFSRMQRE---KIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSR 302
Query: 279 NGLDLDSFISN--ALIDMYGKCGSLKEARRAFDRNSKKRLTS--WNSMINSFALH 329
+ + I + ++D+ GK G L++A R+ + S W +++ LH
Sbjct: 303 D-FSIPPEIEHYGCMVDLLGKAGLLEDALELV-RSMRMEPNSVIWGALLGGCKLH 355
>gi|110741623|dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/474 (39%), Positives = 292/474 (61%), Gaps = 16/474 (3%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAY--ASQPAHASSAFSLYR-DMVRRGQPQPN 113
L + NL YAR +FDH T+LY +I AY QP + ++L D +R P+
Sbjct: 20 LLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLR-----PS 74
Query: 114 QFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLF 173
+ + + +R +++H+Q +SGFE T L+ +Y++ G + AR++F
Sbjct: 75 HHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGA-LCCARRVF 133
Query: 174 DEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
DEMS R+V W AMI+GY R GD+K A LFDSMP ++V +W +VI+G +QNG +S+A+
Sbjct: 134 DEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALK 193
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
F + ME +++PN +T+V L A + G L++G+ + GY NG + ++ NA I+
Sbjct: 194 MF--LCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIE 251
Query: 294 MYGKCGSLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
MY KCG + A+R F+ +R L SWNSMI S A HG+ + ++ +F +M+R +P
Sbjct: 252 MYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLR---EGEKP 308
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
D VTF+ LL AC HGG+V +G+ FK M + ++I P++EHYGC++DLLGR G+ +EA ++
Sbjct: 309 DAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDL 368
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKW 472
+K M ++PD VVWG+LL C +G + AE A + L +++P N G ++++NIY KW
Sbjct: 369 IKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKW 428
Query: 473 DEVRKVRKMLKDRNAYKTPGCSW-IEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
D V ++RK++K K G S+ +EV VH+F DK+HPR+ EIY LE +
Sbjct: 429 DGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEI 482
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/501 (39%), Positives = 302/501 (60%), Gaps = 16/501 (3%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYA 88
LKQL + L ++ ++ C S+ +YA+ IF L + + ++A
Sbjct: 31 LKQLHAHLLKTNSPLSSLPLSRVASVCAFN-SSFSYAKLIFQLLDASEVTHWNTCLRSFA 89
Query: 89 S--QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFE 146
PA A S F YR +R P+ + VLK+C +L+ R K+VH + K G +
Sbjct: 90 EGDSPADAISLF--YR--LREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQ 145
Query: 147 QYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDS 206
++ +V+ Y+ G +IG+ARK+FD+M R+V++W MI+ ++GD + A LF
Sbjct: 146 SNMFLQNMIVHLYALCG-EIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAE 204
Query: 207 MPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD-NIRPNQVTLVCALSAIGHTGM 265
MP+R+V +W S+I G Q G +AI F +E+ D + PN+VT+V L A G
Sbjct: 205 MPERNVRSWTSMIGGYAQCGKSKEAIDLF----LEMEDAGLLPNEVTVVAVLVACADMGN 260
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L LG+ IH + R+G + + + N LIDMY KCG L++A R FD ++ + SW++MI
Sbjct: 261 LVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAG 320
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
A HG++E+++ +F +M+ + ++P+ VTFI +L+AC+H G+VE+GR YF MT+ Y
Sbjct: 321 LAAHGRAEDALALFNKMI---NTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYG 377
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
I P+IEHYGC+VDL RAG +EA E + M I P+ VVWG+LL GCK++ AE A
Sbjct: 378 IVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEAT 437
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
+ L ++DP N GY ++L+NIY E G+W++V +VRK+++DR KTPG S I V+ V+ F
Sbjct: 438 RHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNF 497
Query: 506 HSLDKTHPRTEEIYDALESMV 526
+ D THP+TEEI+ E ++
Sbjct: 498 VAGDDTHPQTEEIFQTWEKLL 518
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 300/507 (59%), Gaps = 10/507 (1%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNF-YAFKLVRFCTLKLSNLTYARFIFDHL 72
+Q A+LERC+++ L Q+ L G + + LV + ++L NL Y R +FD +
Sbjct: 11 EQTQALLERCSNMKELMQIHGQLLKKGTIRNQLTVSTLLVSYARIELVNLAYTRVVFDSI 70
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
++PNT ++ M+ AY S +A LY M+ P N + +P +LK+C +
Sbjct: 71 SSPNTVIWNTMLRAY-SNSNDPEAALLLYHQMLHNSVPH-NSYTFPFLLKACSALSAFEE 128
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
T+ +H I+K GF +L+ Y+ SGN I A LF+++ R++VSW MI GY
Sbjct: 129 TQQIHAHIIKRGFGLEVYATNSLLRVYAISGN-IQSAHVLFNQLPTRDIVSWNIMIDGYI 187
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
+ G++ A +F +MP+++V +W ++I G + G+ +A+S ++M + I+P+ +T
Sbjct: 188 KFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQM---LVAGIKPDSIT 244
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
L C+LSA G L+ GK IH Y+ +N + +D + L DMY KCG +++A F +
Sbjct: 245 LSCSLSACAGLGALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLE 304
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
KK + +W ++I A+HG+ ++ F +M Q I P+ +TF ++L AC+H GL E+
Sbjct: 305 KKCVCAWTAIIGGLAIHGKGREALDWFTQM---QKAGINPNSITFTAILTACSHAGLTEE 361
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G++ F+ M+ Y I+P +EHYGC+VDL+GRAG +EA E ++ M ++P+ +WG+LLN C
Sbjct: 362 GKSLFESMSSVYNIKPSMEHYGCMVDLMGRAGLLKEAREFIESMPVKPNAAIWGALLNAC 421
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+++ + + K LIE+DP++ G I LA+IY G+W++V +VR +K R PG
Sbjct: 422 QLHKHFELGKEIGKILIELDPDHSGRYIHLASIYAAAGEWNQVVRVRSQIKHRGLLNHPG 481
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIY 519
CS I ++ VH+F + D +HP +EIY
Sbjct: 482 CSSITLNGVVHEFFAGDGSHPHIQEIY 508
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/508 (37%), Positives = 307/508 (60%), Gaps = 10/508 (1%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL-KLSNLTYARFIFDHLTTPNTY 78
L+ C+ + LKQ S + LG S N ++++FC + K +L YA +FD + P+ Y
Sbjct: 27 LDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAY 86
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHT 138
+Y + Y + F +Y M+ + PN+F YP ++++C K +H
Sbjct: 87 IYNTIFRGYLRWQLARNCIF-MYSRMLHK-SVSPNKFTYPPLIRACCIDYAIEEGKQIHA 144
Query: 139 QIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIK 198
++K GF L++ Y + + AR++FD M R+VVSWT++I+GY++ G +
Sbjct: 145 HVLKFGFGADGFSLNNLIHMYV-NFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVD 203
Query: 199 NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
A +F+ MP+R+ +WN++IA Q+ +A + F RM +E N+ ++ LS
Sbjct: 204 KAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLE---NVVLDKFVAASMLS 260
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
A G L+ GK IHGY+ ++G++LDS ++ +IDMY KCG L++A F+ +K ++S
Sbjct: 261 ACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISS 320
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
WN MI A+HG+ E +I +F+EM R + PDG+TF+++L+AC H GLVE+G+ YF+
Sbjct: 321 WNCMIGGLAMHGKGEAAIELFKEMER---EMVAPDGITFVNVLSACAHSGLVEEGKHYFQ 377
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
MT+ ++P +EH+GC+VDLLGRAG EEA +++ M + PD V G+L+ C+I+G T
Sbjct: 378 YMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNT 437
Query: 439 DFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV 498
+ E KK+IE++P+N G ++LAN+Y G+W++V KVRK++ DR K PG S IE
Sbjct: 438 ELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIES 497
Query: 499 DKQVHQFHSLDKTHPRTEEIYDALESMV 526
+ V +F + + HP+ +EIY L+ ++
Sbjct: 498 ESGVDEFIAGGRAHPQAKEIYAKLDEIL 525
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/570 (35%), Positives = 302/570 (52%), Gaps = 69/570 (12%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYL 79
+ C + Q+Q+ + G + KLV C L +TYAR +FD + PN L
Sbjct: 108 MRSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICA-TLKRMTYARQLFDQIPDPNIAL 166
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
+ +M YA ++ F ++ ++ +PN F +P VLKSC + + VH
Sbjct: 167 WNSMFRGYAQSESYREVVFLFFQ--MKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCF 224
Query: 140 IVKSGFEQYP-------------------------------VVETALVNSYSRS------ 162
++K GF P V T+++N Y S
Sbjct: 225 LIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSA 284
Query: 163 ------------------------GNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIK 198
G D+ ARKLF EM +R+V+ W ++ GY G+++
Sbjct: 285 RRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVE 344
Query: 199 NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
LF+ MP+R++ +WN++I G NGLF + + F+RM E ++ PN TLV LS
Sbjct: 345 ALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSE--SDVPPNDATLVTVLS 402
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
A G L LGK +H Y +GL + ++ NAL+DMY KCG ++ A F K L S
Sbjct: 403 ACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLIS 462
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
WN++I A+H + +++ +F +M ++ +PDG+TFI +L ACTH GLVE G AYF+
Sbjct: 463 WNTLIGGLAMHSRGADALNLFFQM---KNAGQKPDGITFIGILCACTHMGLVEDGFAYFQ 519
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
M Y I PQIEHYGC+VD+L RAGR E+A V+ M +E D V+W LL C+IY
Sbjct: 520 SMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNV 579
Query: 439 DFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV 498
+ AE A+++LIE++P N +ML+NIYG+ G+W++V +++ ++D K PGCS IEV
Sbjct: 580 ELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEV 639
Query: 499 DKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
+ V +F+SLD+ HP+ EEIY L +V +
Sbjct: 640 NDAVVEFYSLDERHPQIEEIYGVLRGLVKV 669
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/548 (36%), Positives = 303/548 (55%), Gaps = 45/548 (8%)
Query: 17 LAILERCNHINHLKQLQ-SFLTTLGQSQTNF-YAFKLVRFCTLKLS-NLTYARFIFDHLT 73
L+ L+ C I LKQ+ S + T+ + +L C L + YA + L
Sbjct: 41 LSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLR 100
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
TPN LY A+I A+ + +Y+ M+ +G P+ + P VLK+C + R
Sbjct: 101 TPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGI-VPDNYTIPFVLKACAESRAVREG 159
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+ VH Q +K G V L+ Y+ + I ARK+FD R++VSWT MI GY +
Sbjct: 160 EEVHGQAIKMGLASDVYVSNTLMRMYAVC-DVIRSARKVFDTSPQRDLVSWTTMIQGYVK 218
Query: 194 VG----------------------------------DIKNAASLFDSMPDRDVPAWNSVI 219
+G D A +F MP ++V +WNS+I
Sbjct: 219 MGFAREGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMI 278
Query: 220 AGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN 279
+G Q G F +++ FR+M ++P+ VTLV L++ + G+L+LGK +H Y+ RN
Sbjct: 279 SGLAQKGQFKESLYMFRKMQ---RLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRN 335
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
+ D FI NAL+DMY KCGS+ +A F ++K + S+ +MI A+HGQ ++ +F
Sbjct: 336 QIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLF 395
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
EM + I PD VTF+ +L AC+H GLVE+GR YF+ M+ Y + PQ+EHYGC+VDL
Sbjct: 396 SEMPK---MGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDL 452
Query: 400 LGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYG 459
LGRAG EA E ++ M IEPD V G+LL CKI+G+ + E +KK+ +I+P G
Sbjct: 453 LGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAY 512
Query: 460 IMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
++++NIY +W + K+RK +K+RN KTPGCS IE+D +H+F DK+HP+ +EIY
Sbjct: 513 VLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIY 572
Query: 520 DALESMVA 527
L+ +++
Sbjct: 573 KLLDEIMS 580
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/580 (36%), Positives = 306/580 (52%), Gaps = 71/580 (12%)
Query: 11 TLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFD 70
L + +++L C + L+++Q+ + T G Q N Y V + L + +AR +FD
Sbjct: 23 VLEEHFISLLRSCKTVALLQKVQAQIITHG-FQYNGYVAPNVVTSWVGLKQMAHARHLFD 81
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
H P L+ A+ Y + F L+ M + +PN F +P VLKSC +
Sbjct: 82 HFPDPKVELWNAISRGYFHNAFYREVVF-LFGKM-KSMDVRPNCFTFPLVLKSCAKIGAF 139
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI-- 188
+ +H +++K G E V T L++ YS G IG A KLF M +RN+V+WT+MI
Sbjct: 140 VEGEEIHCEVIKGGLEGNQFVATTLIDVYS-GGRAIGSAYKLFVGMLERNIVAWTSMISG 198
Query: 189 -----------------------------SGYTRVGDIKNAASLFDSMPDRD-------- 211
SGY +GD+K A LFD+MP RD
Sbjct: 199 YILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTML 258
Query: 212 -----------------------VPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
V +WN +I G NG F + + F+RM + + P
Sbjct: 259 NGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRM--LIDGLVVP 316
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
N TLV LSA G L LGK +H Y G ++ NALIDMY KCG ++ A F
Sbjct: 317 NDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVF 376
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
+ K L +WNSMI A HG +++ +F +M + + +PDG+TFI +L +CTH G
Sbjct: 377 ESMDLKDLITWNSMICGLATHGCGADALTLFHQM---KINGEKPDGITFIGVLCSCTHLG 433
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
LVE+G +YF M Y I PQIEHYGC+VDL GRAG + A+E VK M +E D V+W +L
Sbjct: 434 LVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAAL 493
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L C+IY D AE A++KLI ++P N ++L+NIYG+LG+W +V +++ +++D +
Sbjct: 494 LGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSK 553
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
K PGCS IEV+ V +F+SLD+ H +++EIY L+ ++ L
Sbjct: 554 KLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKL 593
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/580 (36%), Positives = 306/580 (52%), Gaps = 71/580 (12%)
Query: 11 TLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFD 70
L + +++L C + L+++Q+ + T G Q N Y V + L + +AR +FD
Sbjct: 65 VLEEHFISLLRSCKTVALLQKVQAQIITHG-FQYNGYVAPNVVTSWVGLKQMAHARHLFD 123
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
H P L+ A+ Y + F L+ M + +PN F +P VLKSC +
Sbjct: 124 HFPDPKVELWNAISRGYFHNAFYREVVF-LFGKM-KSMDVRPNCFTFPLVLKSCAKIGAF 181
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI-- 188
+ +H +++K G E V T L++ YS G IG A KLF M +RN+V+WT+MI
Sbjct: 182 VEGEEIHCEVIKGGLEGNQFVATTLIDVYS-GGRAIGSAYKLFVGMLERNIVAWTSMISG 240
Query: 189 -----------------------------SGYTRVGDIKNAASLFDSMPDRD-------- 211
SGY +GD+K A LFD+MP RD
Sbjct: 241 YILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTML 300
Query: 212 -----------------------VPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
V +WN +I G NG F + + F+RM + + P
Sbjct: 301 NGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRM--LIDGLVVP 358
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
N TLV LSA G L LGK +H Y G ++ NALIDMY KCG ++ A F
Sbjct: 359 NDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVF 418
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
+ K L +WNSMI A HG +++ +F +M + + +PDG+TFI +L +CTH G
Sbjct: 419 ESMDLKDLITWNSMICGLATHGCGADALTLFHQM---KINGEKPDGITFIGVLCSCTHLG 475
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
LVE+G +YF M Y I PQIEHYGC+VDL GRAG + A+E VK M +E D V+W +L
Sbjct: 476 LVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAAL 535
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L C+IY D AE A++KLI ++P N ++L+NIYG+LG+W +V +++ +++D +
Sbjct: 536 LGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSK 595
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
K PGCS IEV+ V +F+SLD+ H +++EIY L+ ++ L
Sbjct: 596 KLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKL 635
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/528 (36%), Positives = 301/528 (57%), Gaps = 12/528 (2%)
Query: 3 SVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNL 62
S T+ + + + +L++ + +KQ+ + + T G +Q L+ + NL
Sbjct: 45 SGTSSFSLPSHSTFVQLLKKRPSLTQIKQIHAQVVTHGLAQNTSLLGPLIH-SYIGCRNL 103
Query: 63 TYARFIFDHLTT-PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP-QPNQFIYPHV 120
++AR +FD + P T ++ MI AY+ P+ S + L+ M+ G+P +++ + V
Sbjct: 104 SFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLY-LFHQMLAHGRPTSADKYTFTFV 162
Query: 121 LKSCPDVLESRG-TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
+C RG + VH +VK G+E V +LVN YS + A+++FDEM R
Sbjct: 163 FTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVD-AKRVFDEMPQR 221
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
+V++WT+++ GY G++ A LFD MP R+ +W ++AG + +++A+ F
Sbjct: 222 DVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFN--D 279
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
M D ++PN+ LV LSA H G L GK IH Y+ +N + L S IS ALIDMY KCG
Sbjct: 280 MLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCG 339
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
+ ARR FD K+ L +W SMI+ ++HG + F EM+ +PD +T +
Sbjct: 340 RIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLA---EGFKPDDITLLG 396
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
+LN C+H GLVE+G + F M + I P++EHYGCL+DLLGRAGR E A E +K M +E
Sbjct: 397 VLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPME 456
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYG-IMLANIYGELGKWDEVRKV 478
PD V W +LL+ C+I+G D E + + E+ P + G G ++L+N+Y +G+W+ V KV
Sbjct: 457 PDVVAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKV 516
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
RK + R + PGCSWIE+D VH+F + DK HPR EI L ++
Sbjct: 517 RKAMSQRGSEGCPGCSWIEIDGVVHEFLAADKLHPRISEINKKLNEVL 564
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/537 (36%), Positives = 308/537 (57%), Gaps = 51/537 (9%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
K L + L G+ Q+ F + +LV L +++ +R FD + + Y + +MI+AY
Sbjct: 36 KCLHALLVVAGKVQSIFISTRLVNLYA-NLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
H A + ++ + +P+ + +P VLK+C +++ R +H K GF+
Sbjct: 95 N-GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGR---KIHCWAFKLGFQWNV 150
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG------------------- 190
V +L++ YSR G GIAR LFD+M R++ SW AMISG
Sbjct: 151 FVAASLIHMYSRFGF-TGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL 209
Query: 191 --------------------YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSD 230
Y ++G + +A +F+ +P +DV +WN++I G QNGL S+
Sbjct: 210 EGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASE 269
Query: 231 AISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNA 290
AI ++ M E I PNQ T V L A H G LQ G IHG V + L LD F++
Sbjct: 270 AIEVYKMM--EECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATC 327
Query: 291 LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
LID+YGKCG L +A F + ++ +WN++I+ +HG +E ++ +F EM+ D +
Sbjct: 328 LIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEML---DEGV 384
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
+PD VTF+SLL+AC+H G VE+G+ F+LM + Y I+P ++HYGC+VDLLGRAG E A
Sbjct: 385 KPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAY 443
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELG 470
+ +K M ++PD +WG+LL C+I+G + +FA +L E+D N GY ++L+NIY +G
Sbjct: 444 DFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVG 503
Query: 471 KWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
KW+ V KVR + ++R KTPG S IEV+++V F++ +++HP+ +EIY+ L + A
Sbjct: 504 KWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTA 560
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/519 (37%), Positives = 303/519 (58%), Gaps = 24/519 (4%)
Query: 23 CNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTPNTYLYT 81
C + LKQL + + Q + A +L+RF + +L YAR IF + PN + Y
Sbjct: 21 CKTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYN 80
Query: 82 AMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIV 141
+I A S+ A ++ +MV +PN F +P V K+C R + VH V
Sbjct: 81 TLIRAL-SESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAV 139
Query: 142 KSGFEQYPVVETALVNSYSRSGNDIGIARKLF---------DEMSDR------NVVSWTA 186
K G + V + +V Y G + A +LF D + D+ +VV W
Sbjct: 140 KFGLDSDEFVVSNVVRMYLSCGV-MEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNV 198
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
MI GY R+G+++ A +LFD MP R V +WN +IAG Q+G F +A+ FR M M +
Sbjct: 199 MIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMA---EV 255
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
PN VTLV L A+ G L+LGK +H Y RN + +D + +ALIDMY KCGS+++A +
Sbjct: 256 PPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQ 315
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F+ K+ + +W+++I A+HG++++++ FE+M R + P VT+I LL+AC+H
Sbjct: 316 VFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERA---GVMPSDVTYIGLLSACSH 372
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GLV +GR +F M + +EP+IEHYGC+VDLLGRAG EE+ E++ M I+PD+V+W
Sbjct: 373 AGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWK 432
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+LL CK++G + + + L+E+ P++ G + L+NIY LG W+ V KVR M+K+ +
Sbjct: 433 ALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMD 492
Query: 487 AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PGCSWIE+D +H+F D +HP++++I+ L+ M
Sbjct: 493 VRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEM 531
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/512 (37%), Positives = 312/512 (60%), Gaps = 12/512 (2%)
Query: 10 QTLNQ-QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFI 68
++L+Q Q++++L+R HIN + + + L G SQ F F+L+R C+ K + YA I
Sbjct: 45 KSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCS-KCHAIDYASRI 103
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
F + PN YLYTA+I + S + A LY M+ P+ ++ +LK+C L
Sbjct: 104 FQYTHNPNVYLYTALIDGFVSSGNYLE-AIQLYSRMLHES-ILPDNYLMASILKACGSQL 161
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
R + VH++ +K GF +V ++ Y + G ++G AR++F+EM + +VV+ T MI
Sbjct: 162 ALREGREVHSRALKLGFSSNRLVRLRIMELYGKCG-ELGDARRVFEEMPE-DVVASTVMI 219
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
S Y+ G ++ A ++F + +D W ++I G +N + A+ FR GM+ +N+RP
Sbjct: 220 SSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFR--GMQ-GENVRP 276
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
N+ T+VC LSA G L++G+ +H Y+ + ++L+ F+ NALI+MY +CGS+ EA+ F
Sbjct: 277 NEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVF 336
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
D + + ++N+MI+ +++G+S +I +F M+ +RP VTF+ +LNAC+HGG
Sbjct: 337 DEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMV---GRRLRPTNVTFVGVLNACSHGG 393
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
LV+ G F M + YR+EPQIEHYGC+VDLLGR GR EEA ++++ MK+ PD ++ G+L
Sbjct: 394 LVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTL 453
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L+ CK++ + E K+L + + G ++L+++Y GKW E +VR +K+
Sbjct: 454 LSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQ 513
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYD 520
K PGCS IEV+ ++H+F D HP+ E IY+
Sbjct: 514 KEPGCSSIEVNNEIHEFLLGDLRHPQKERIYE 545
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 184/501 (36%), Positives = 300/501 (59%), Gaps = 14/501 (2%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMIT 85
+N LKQ+ ++ G T F KL L+L +L YA +FD + P+ YLY I
Sbjct: 1 MNQLKQIHAYSLRNGLDHTKFLIEKL-----LQLPDLPYACTLFDQIPKPSVYLYNKFIQ 55
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
++S H + LY M +G PNQ+ + + +C + +M+H+ KSGF
Sbjct: 56 TFSS-IGHPHRCWLLYCQMCSQG-CSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGF 113
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
TAL++ Y++ G + AR+LFDEM R++ +W ++I+GY R G ++ A LF+
Sbjct: 114 ASDMFAMTALLDMYAKLGM-LRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFN 172
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
MP R+V +W ++I+G QNG ++ A+ F +G+E +PN+V++ L A G
Sbjct: 173 KMPVRNVISWTALISGYAQNGKYAKALEMF--IGLENEKGTKPNEVSIASVLPACSQLGA 230
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR-NSKKRLTSWNSMIN 324
L +GK I Y NG ++++SNA+++++ +CG+++EA++ FD SK+ L SWN+MI
Sbjct: 231 LDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIM 290
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
A+HG+ +++ ++++M+ +RPD VTF+ LL ACTHGG+V +GR F+ M +
Sbjct: 291 GLAVHGRCIDALQLYDQMLI---RKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKF 347
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
++ P++EHYGCLVDLLGRAG +EA +++ M + PD V+WG+LL C +G + E A
Sbjct: 348 QVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVA 407
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
+ L +++P N G ++L+NIY G W V ++RKM+K + K G S+IEV +H+
Sbjct: 408 AESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEVGDGIHE 467
Query: 505 FHSLDKTHPRTEEIYDALESM 525
F D++H ++ EIY L +
Sbjct: 468 FIVEDRSHLKSGEIYALLHKI 488
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 298/522 (57%), Gaps = 21/522 (4%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRF-CTLKLSNLTYARFIFDHLTTPNTY 78
++ C + LKQ+ +FL GQ+ N A +++R T ++ YA +FD L N +
Sbjct: 22 IKACKSMRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCF 81
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHT 138
+ +I A A A ++ M+ +PNQF +P VLK+C + K VH
Sbjct: 82 AWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHG 141
Query: 139 QIVKSGFEQYPVVETALVNSYSRSGN-------------DIGIARKLFDEMSDR--NVVS 183
++K G V T L+ Y G+ + R L + R NVV
Sbjct: 142 LLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVL 201
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
M+ GY RVG++K A LFD M R V +WN +I+G QNG + +AI F RM M++
Sbjct: 202 CNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRM-MQMG 260
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
D + PN+VTLV L AI G+L+LGK +H Y +N + +D + +AL+DMY KCGS+++
Sbjct: 261 D-VLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEK 319
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A + F+R + + +WN++I A+HG++ + +F + R + I P VT+I++L+A
Sbjct: 320 AIQVFERLPQNNVITWNAVIGGLAMHGKAND---IFNYLSRMEKCGISPSDVTYIAILSA 376
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C+H GLV++GR++F M + ++P+IEHYGC+VDLLGRAG EEA E++ M ++PD+V
Sbjct: 377 CSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDV 436
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+W +LL K++ A + L+++ P++ G + L+N+Y G WD V VR M+K
Sbjct: 437 IWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMK 496
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
D + K PGCSWIE+D +H+F D +H R ++I+ LE +
Sbjct: 497 DMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEI 538
>gi|224164620|ref|XP_002338705.1| predicted protein [Populus trichocarpa]
gi|222873268|gb|EEF10399.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 177/265 (66%), Positives = 213/265 (80%), Gaps = 11/265 (4%)
Query: 83 MITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVK 142
M+TAYAS H SS F L+R M+RRG P+PN F++PHVLK C + TK VH QI K
Sbjct: 1 MVTAYASIQDHQSS-FDLFRFMLRRGHPKPNHFLFPHVLKYC------QVTKFVHAQIEK 53
Query: 143 SGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAAS 202
GF QYPVV+TAL++SYSRSG DIGIAR++FDEMS+RNVVSWTAMISGYTR+G+I+NA +
Sbjct: 54 LGFGQYPVVQTALIDSYSRSGYDIGIARRMFDEMSERNVVSWTAMISGYTRLGEIENAIT 113
Query: 203 LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM---GMEVSD-NIRPNQVTLVCALS 258
LFD MP+RDVP+WN+VI+GC QNGLF+ AI+ F++M +EV ++RPNQ T+VCALS
Sbjct: 114 LFDEMPERDVPSWNAVISGCAQNGLFTRAITIFKKMVGLSLEVQHRDMRPNQTTVVCALS 173
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
A GHTGML +GK IHGYVYRN DSF+ NAL+DMYGKCG LKEA++ FD SKK LTS
Sbjct: 174 ACGHTGMLHVGKWIHGYVYRNMRSSDSFVLNALVDMYGKCGCLKEAKKVFDATSKKSLTS 233
Query: 319 WNSMINSFALHGQSENSICVFEEMM 343
WNSMIN ALHGQSE +ICVFEEM+
Sbjct: 234 WNSMINCLALHGQSERAICVFEEML 258
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 38/211 (18%)
Query: 267 QLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG-SLKEARRAFDRNSKKRLTSWNSMINS 325
Q+ K +H + + G + ALID Y + G + ARR FD S++ + SW +MI+
Sbjct: 42 QVTKFVHAQIEKLGFGQYPVVQTALIDSYSRSGYDIGIARRMFDEMSERNVVSWTAMISG 101
Query: 326 FALHGQSENSICVFEEM-----------------------------------MRCQDHNI 350
+ G+ EN+I +F+EM + Q ++
Sbjct: 102 YTRLGEIENAITLFDEMPERDVPSWNAVISGCAQNGLFTRAITIFKKMVGLSLEVQHRDM 161
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
RP+ T + L+AC H G++ G+ + + R LVD+ G+ G +EA
Sbjct: 162 RPNQTTVVCALSACGHTGMLHVGKWIHGYVYRNMRSSDSFV-LNALVDMYGKCGCLKEAK 220
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+V + W S++N ++G+++ A
Sbjct: 221 KVFDATS-KKSLTSWNSMINCLALHGQSERA 250
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
++ AR +FD ++ N +TAMI+ Y ++ +A +L+ +M R P N V
Sbjct: 76 DIGIARRMFDEMSERNVVSWTAMISGY-TRLGEIENAITLFDEMPERDVPSWNA-----V 129
Query: 121 LKSCP-DVLESRGT----KMVHTQIVKSGFEQYPVVETALVNSYSRSGND----IG--IA 169
+ C + L +R KMV + + P +T +V + S G+ +G I
Sbjct: 130 ISGCAQNGLFTRAITIFKKMVGLSLEVQHRDMRPN-QTTVVCALSACGHTGMLHVGKWIH 188
Query: 170 RKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
++ M + A++ Y + G +K A +FD+ + + +WNS+I +G
Sbjct: 189 GYVYRNMRSSDSFVLNALVDMYGKCGCLKEAKKVFDATSKKSLTSWNSMINCLALHGQSE 248
Query: 230 DAISFFRRMGMEVSD 244
AI F M V+D
Sbjct: 249 RAICVFEEMLHYVAD 263
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/550 (35%), Positives = 310/550 (56%), Gaps = 44/550 (8%)
Query: 13 NQQVLAILERCNHINHLKQL-----QSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARF 67
+++ + +L RC ++QL Q + + N A K + + NL ++
Sbjct: 21 HRKTIHLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSS-SHGNLRHSVL 79
Query: 68 IFDH-LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPD 126
IF+H L+ PN + Y A++ A++ A ++ +V P P+++ + VLK+C
Sbjct: 80 IFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAG 139
Query: 127 VLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS--------- 177
+ + + VH + K G E V +LV+ Y + G + IA+KLFDEM
Sbjct: 140 LAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNC-IAQKLFDEMVVRDVVSWNT 198
Query: 178 ----------------------DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAW 215
++N+VSW+ MISGY RVG+++ A LF++MP R+V +W
Sbjct: 199 LISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSW 258
Query: 216 NSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGY 275
N++IAG QN ++DAI FR+M E + PN VTLV LSA H G L LGK IH +
Sbjct: 259 NAMIAGYAQNEKYADAIELFRQMQHE--GGLAPNDVTLVSVLSACAHLGALDLGKWIHRF 316
Query: 276 VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
+ RN +++ F+ NAL DMY KCG + EA+ F ++ + SW+ +I A++G + +
Sbjct: 317 IRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEA 376
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
F EM+ + + P+ ++F+ LL ACTH GLV++G YF +M + Y I P+IEHYGC
Sbjct: 377 FNFFAEMI---EDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGC 433
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNN 455
+VDLL RAGR ++A ++ M ++P+ +VWG+LL GC+IY + E V +++E+D N+
Sbjct: 434 VVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNH 493
Query: 456 GGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRT 515
G + LAN+Y +G+ D+ R ++D + KTPGCSWIE++ V++F D +HP++
Sbjct: 494 SGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQS 553
Query: 516 EEIYDALESM 525
IY + +
Sbjct: 554 LRIYSMIREL 563
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 180/506 (35%), Positives = 302/506 (59%), Gaps = 9/506 (1%)
Query: 21 ERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLY 80
+ C + L+++ + L G ++ A +++ FCT ++ YA +F + PN +++
Sbjct: 4 KNCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRNPNLFVW 63
Query: 81 TAMITAYASQPAHASSAFSLYRDMV-RRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
+I + SQ + +A SL+ DM+ QP + YP V K+ + + +H +
Sbjct: 64 NTIIRGF-SQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLHGR 122
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
++K G E ++ ++N Y G +G A+++FD + +VV+W MI G + G+I
Sbjct: 123 VIKLGLENDQFIQNTILNMYVNCGF-LGEAQRIFDGATGFDVVTWNTMIIGLAKCGEIDK 181
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
+ LFD M R+ +WNS+I+G + G F +A+ F RM E I+P++ T+V L+A
Sbjct: 182 SRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEE---GIKPSEFTMVSLLNA 238
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSW 319
G L+ G+ IH Y+ +N L+S + A+IDMY KCGS+ +A + F KK L+ W
Sbjct: 239 CACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCW 298
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
NS+I A+ G+ ++ +F ++ + N++PD V+FI +L AC H G+V++ + YF L
Sbjct: 299 NSLILGLAMSGRGNEAVRLFSKL---ESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLL 355
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
M++TY+IEP I+HY C+VD+LGRAG EEA E++K M + PD ++WGSLL+ C+ YG +
Sbjct: 356 MSETYKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIE 415
Query: 440 FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVD 499
A+ A K++ E+DPN I+L+N+Y ++E + R LK++ K PGCS IEV+
Sbjct: 416 MAKQAAKRVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIEVN 475
Query: 500 KQVHQFHSLDKTHPRTEEIYDALESM 525
+VH+F + + HPR+++IY AL+ +
Sbjct: 476 GEVHEFVAGGRLHPRSKDIYHALDDL 501
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 183/511 (35%), Positives = 297/511 (58%), Gaps = 9/511 (1%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL-SNLTYARFIFDHLTT 74
+L L C + L Q+ + T G NF A +++ F L ++ YARF+F +
Sbjct: 38 ILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRK 97
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
P+ ++ +I AYA P + A Y +M P+ +P +LK+C ++ R +
Sbjct: 98 PDIFIANTLIRAYAFSP-NPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGE 156
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H+ + K G+ V LV Y+ G I A +FD + + SW MI GY +
Sbjct: 157 AIHSHVFKLGWSSEVSVSNFLVQMYASCGL-IESAGLVFDRTPECDGASWNIMIGGYLKC 215
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G K+A +F++MPDRDV +W+ +I G Q F + + F+ M + + I PN+ LV
Sbjct: 216 GVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDM---MGEKIEPNESVLV 272
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
ALSA H G ++ G+ I Y+ R + L + ALIDMY KCGS++ A F + +K
Sbjct: 273 NALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEK 332
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ +W++MIN A++GQ ++++ +F +M + ++P+ VTFI +LNAC+H LV++G
Sbjct: 333 NVLAWSAMINGLAINGQGKDALNLFSQM---EMQGVKPNEVTFIGILNACSHSKLVDEGC 389
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
++F MT Y ++P H+ C+VDL GRAG ++A V+K M +P+ +WG+LLN C+I
Sbjct: 390 SFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRI 449
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+G T+ E K+L+E+DPN+GG ++L+NIY G+WD V ++R+M+++R KTPGCS
Sbjct: 450 HGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCS 509
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+I++ +H+F + D +HP+ E IY L M
Sbjct: 510 FIDLGDTIHEFVAGDSSHPQLEMIYAKLGEM 540
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 190/512 (37%), Positives = 310/512 (60%), Gaps = 12/512 (2%)
Query: 10 QTLNQ-QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFI 68
++L+Q Q++++L+R HIN + + + L G SQ F F+L+R C+ K + YA I
Sbjct: 45 KSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCS-KCHAIDYASRI 103
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
F + PN YLYTA+I + S + A LY M+ P+ ++ +LK+C L
Sbjct: 104 FQYTHNPNVYLYTALIDGFVSS-GNYFDAIQLYSRMLH-DSILPDNYLMASILKACGSQL 161
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
R + VH++ +K G +V ++ Y + G ++G AR++F+EM + +VV+ T MI
Sbjct: 162 ALREGREVHSRALKLGLSSNRLVRLRIMELYGKCG-ELGDARRVFEEMPE-DVVASTVMI 219
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
S Y+ G ++ A ++F + +D W ++I G +N + A+ FR GM+ +N+RP
Sbjct: 220 SSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFR--GMQ-GENVRP 276
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
N+ T+VC LSA G L++G+ +H Y+ + ++L+ F+ NALI+MY +CGS+ EA+ F
Sbjct: 277 NEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVF 336
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
D + + ++N+MI+ +++G+S +I +F M+ +RP VTF+ +LNAC+HGG
Sbjct: 337 DEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMI---GRRLRPTNVTFVGVLNACSHGG 393
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
LV+ G F MT+ Y +EPQIEHYGC+VDLLGR GR EEA ++++ MK+ PD ++ G+L
Sbjct: 394 LVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTL 453
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L+ CK++ + E K L + + G ++L+++Y GKW E +VR +K+
Sbjct: 454 LSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQ 513
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYD 520
K PGCS IEV+ ++H+F D HPR E IY+
Sbjct: 514 KEPGCSSIEVNNEIHEFLLGDLRHPRKERIYE 545
>gi|356522492|ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g08510-like [Glycine max]
Length = 474
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 186/465 (40%), Positives = 278/465 (59%), Gaps = 11/465 (2%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+ H + P +LY +I AY+S P H FSLY +R PNQ + + +C +
Sbjct: 2 VLHHSSKPTLFLYNKLIQAYSSHPQHQHRCFSLYSQ-IRLHGFLPNQHTFNFLFSACTSL 60
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
S +M+HT +KSGFE TAL++ Y++ G + +ARKLFDEM R V W AM
Sbjct: 61 SSSSLGQMLHTHFIKSGFEPDLFAATALLDMYAKVG-ALELARKLFDEMPVRGVPRWNAM 119
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
++G R GD+ A LF SMP R+V W ++I+G + N + A+ F +GME I
Sbjct: 120 MAGLARFGDMDGALELFXSMPSRNVVPWTTMISGYSWNKQYDKALGLF--LGMEQEKGIM 177
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
PN VTLV L A + L++G+ + Y +NG + + SNA+++MY KCG + A R
Sbjct: 178 PNAVTLVSILPACANLXALEIGQRVEAYARKNGFFKNXYASNAVLEMYVKCGKIDAAWRV 237
Query: 308 FDR-NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F+ S + L SWNSM+ A+HG+ ++ ++++M+ PD VTF+ LL ACT
Sbjct: 238 FNEIGSLRNLCSWNSMVVGLAVHGECCKALELYDQML---GEGTSPDDVTFVGLLLACTQ 294
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GG+V++GR FK T ++ I P++EHYGC+VDLLGRAG+ EA EV++ M ++PD V+WG
Sbjct: 295 GGMVKKGRHIFKSKTTSFYIIPKLEHYGCMVDLLGRAGQLREAYEVIQSMSMKPDSVIWG 354
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+LL C +G + AE A + L ++P N G ++L+NIY G+WD V K+RK++K
Sbjct: 355 ALLGACSFHGNVELAEIAAESLFVLEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSK 414
Query: 487 AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY---DALESMVAL 528
K+ G S+IE Q+H+F D++HP++ EI+ D + MV L
Sbjct: 415 ITKSAGHSFIEEGAQLHKFIVKDRSHPKSNEIFALLDGVYEMVKL 459
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 193/507 (38%), Positives = 306/507 (60%), Gaps = 10/507 (1%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL-SNLTYARFIFDH 71
+++VL++L++C + H+KQ+QS LT G F A +++ FC + ++++A +F
Sbjct: 13 SRRVLSLLDQCVTMAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLS 72
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
L ++++ M+ A+ + A+ SLY+ M+ G PN + + +L++C + +
Sbjct: 73 LPRRTSFIWNTMLRAFTDKKEPAT-VLSLYKYMLSTG-FLPNNYTFSFLLQACAQLSDLS 130
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
++H Q V+ G+E Y V+ L++ Y+ S N + AR+LFD +R+VV+WTA+I+GY
Sbjct: 131 FGILLHAQAVRLGWEAYDFVQNGLLHLYA-SCNCMDSARRLFDGSVNRDVVTWTAVINGY 189
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
+ G + A LFD MP+++ +W+++I G Q GLF +A+ F M + RPN
Sbjct: 190 AKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIA---GFRPNHG 246
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
+V AL+A G L G+ IH YV RN + LD + ALIDMY KCG ++ A R FD
Sbjct: 247 AIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEM 306
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
+ + ++ S+I+ A HG S +I +F M Q+ + P+ VTFI LL+AC+ GLVE
Sbjct: 307 LDRDVFAFTSLISGLANHGHSATAIEMFTRM---QNEGVCPNEVTFICLLSACSRVGLVE 363
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G FK MT Y IEP ++HYGCLVDLLGRAG E+A VV+ M +EPD V G+LLN
Sbjct: 364 EGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNA 423
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C+++G + + V+ L E ++GG ++L+N+Y +W++V KVRK ++++ K P
Sbjct: 424 CRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVP 483
Query: 492 GCSWIEVDKQVHQFHSLDKTHPRTEEI 518
GCS IEVD V +F + D +H +EI
Sbjct: 484 GCSLIEVDGAVFEFVAGDMSHVFMDEI 510
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 181/496 (36%), Positives = 298/496 (60%), Gaps = 10/496 (2%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
++L + LG S F L+ +L ++ AR +FD + + + MI+ Y +
Sbjct: 139 RELHDHIVKLGFSSNVFVQNALIHLYSLS-GEVSVARGVFDRSSKGDVVTWNVMISGY-N 196
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
+ + L+ +M R + P+ VL +C + + K VH + E
Sbjct: 197 RSKQFDESMKLFDEM-ERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVR 255
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
V+E AL++ Y+ G D+ A +FD M R+V+SWTA+++G+T +G + A + FD MP+
Sbjct: 256 VLENALIDMYAACG-DMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPE 314
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
RD +W ++I G Q F + +S FR M + NI+P++ T+V L+A H G L+LG
Sbjct: 315 RDFVSWTAMIDGYLQVNRFKEVLSLFREMQ---AANIKPDEFTMVSILTACAHLGALELG 371
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
+ I Y+ +N + +DSF+ NALIDMY CG++++A R F+ + SW ++I A++
Sbjct: 372 EWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAIN 431
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
G E ++ +F +M++ +I PD VT I +L ACTH G+V++G+ +F MT + IEP
Sbjct: 432 GYGEEALDMFSQMLKA---SITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPN 488
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
+ HYGC+VDLLGRAG +EA EV+K M ++P+ +VWGSLL C+++ + AE A ++++
Sbjct: 489 VAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQIL 548
Query: 450 EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLD 509
E++P NG ++L NIY +W+++ +VRK++ DR KTPGCS IE++ VH+F + D
Sbjct: 549 ELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGD 608
Query: 510 KTHPRTEEIYDALESM 525
+ HP+++EIY L+ M
Sbjct: 609 QVHPQSKEIYSKLDEM 624
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 224/534 (41%), Gaps = 113/534 (21%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL-KLSNLTYARFIFDHLTTP 75
L++++ C + LKQ+ S G +++ FC +L ++ YAR +FD + P
Sbjct: 23 LSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGP 82
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
N +++ MI Y S+ +SA S+Y +M+ RG P+++ YP +LK + +
Sbjct: 83 NHFVWNNMIKGY-SRVGCPNSAVSMYCEMLERGV-MPDEYTYPFLLKRFTRDTAVKCGRE 140
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+H IVK GF V+ AL++ YS SG ++ +AR +FD S +VV+W MISGY R
Sbjct: 141 LHDHIVKLGFSSNVFVQNALIHLYSLSG-EVSVARGVFDRSSKGDVVTWNVMISGYNRSK 199
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
+ LFD M RM + P+ +TLV
Sbjct: 200 QFDESMKLFDEM----------------------------ERM------RVLPSSITLVS 225
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE------------ 303
LSA L +GK +H YV ++ + NALIDMY CG +
Sbjct: 226 VLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRD 285
Query: 304 -------------------ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
AR FD+ ++ SW +MI+ + + + + +F EM
Sbjct: 286 VISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREM-- 343
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGR-----------------------AYFKL-- 379
Q NI+PD T +S+L AC H G +E G YF
Sbjct: 344 -QAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGN 402
Query: 380 MTKTYRIEPQIEH-----YGCLVDLLGRAGRFEEALEVVKGM---KIEPDEVVWGSLLNG 431
+ K RI + H + ++ L G EEAL++ M I PDEV +L
Sbjct: 403 VEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCA 462
Query: 432 CKIYGRTD-----FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
C G D FA + IE PN YG M+ ++ G G E +V K
Sbjct: 463 CTHSGMVDKGKKFFARMTTQHGIE--PNVAHYGCMV-DLLGRAGHLKEAHEVIK 513
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 187/548 (34%), Positives = 315/548 (57%), Gaps = 39/548 (7%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVR--FCTLKLSNLTYARFIF 69
+ ++V+++L+ +N + Q+ + + NF KL+R F ++L YAR +F
Sbjct: 2 IGKKVMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVF 61
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
D + +P+T+++ MI AY + + + SL+ M + + + V+++C + +
Sbjct: 62 DEIPSPDTFIWNTMIRAYLNS-QNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKD 120
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN------------------------- 164
+ +HTQ++K G VETAL+ Y++ G+
Sbjct: 121 PGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAE 180
Query: 165 -----DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVI 219
+I +A LFD M +R++VSW MI G+ +GD+ A LFD +RD+ +W+S+I
Sbjct: 181 YVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMI 240
Query: 220 AGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN 279
A + ++A+ F M + N+ P++VT+V LSA G G L +GK+IH + RN
Sbjct: 241 AAYAKARQSNEALRLFHEMQLA---NVLPDKVTMVSVLSACGDVGALGMGKMIHECIERN 297
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
+++D + +L+DMY KCG + + R F+ + + + +W++MI A HG E ++ F
Sbjct: 298 RIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHF 357
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
+M+ +I+P+ VTFI +L+AC+H GLV++G YF M+K Y + P+IEHYGC+VD+
Sbjct: 358 SKMI---SEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDI 414
Query: 400 LGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYG 459
LGRAGR +EA+E++K M PD +VW +LL C+IY + AE A L+E++P+ G
Sbjct: 415 LGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNY 474
Query: 460 IMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
++L+NIY + +WD+V VR+M+K+ N K PG S IEVD VH+F + D++HP +++I
Sbjct: 475 VLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKIL 534
Query: 520 DALESMVA 527
L + A
Sbjct: 535 RMLSEITA 542
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 185/529 (34%), Positives = 308/529 (58%), Gaps = 27/529 (5%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFC-TLKLSNLTYARFIFDHLTTP 75
L++ E C + HLKQ+ S G K++ FC + + ++ YAR +FD + P
Sbjct: 18 LSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEP 77
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ + + M Y S+ A SLY +M+ R +P+ + YP + K + + +
Sbjct: 78 SVFSWNIMFKGY-SRIACPKLGVSLYLEMLER-NVKPDCYTYPFLFKGFTRSVALQLGRE 135
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV- 194
+H +VK G + AL+N YS G I +AR +FD +VV+W AMISGY R+
Sbjct: 136 LHCHVVKYGLDSNVFAHNALINMYSLCGL-IDMARGIFDMSCKSDVVTWNAMISGYNRIK 194
Query: 195 ----------------GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
G + A F MP+RD +W ++I G + + +A+ FR M
Sbjct: 195 KDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREM 254
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
+ I+P++ T+V L+A G L+LG+ I Y+ +N + D+F+ NALIDMY KC
Sbjct: 255 Q---TSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKC 311
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G+++ A F+ ++ +W +M+ A++G E ++ +F +M++ ++ PD VT++
Sbjct: 312 GNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKA---SVTPDEVTYV 368
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
+L+ACTH G+V++G+ +F MT + IEP I HYGC+VDLLG+AG +EA E++K M +
Sbjct: 369 GVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPM 428
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
+P+ +VWG+LL C+I+ + AE A+++++E++PNNG ++ NIY KWD++R++
Sbjct: 429 KPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLREL 488
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
R+++ DR KTPGCS IE++ VH+F + D++HP+T+EIY L M +
Sbjct: 489 RQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTS 537
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 185/519 (35%), Positives = 303/519 (58%), Gaps = 13/519 (2%)
Query: 13 NQQVLAILERCNHINHLKQL-----QSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARF 67
+++ + +L RC ++QL Q + + N A K + + NL ++
Sbjct: 21 HRKTIHLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSS-SHGNLRHSVL 79
Query: 68 IFDH-LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPD 126
IF+H L+ PN + Y A++ A++ A ++ +V P P+++ + VLK+C
Sbjct: 80 IFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAG 139
Query: 127 VLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
+ + + VH + K G E V +LV+ Y + G + IA+KLFDEM R+VVSW
Sbjct: 140 LAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNC-IAQKLFDEMVVRDVVSWNT 198
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
+ISGY G + A +FD M ++++ +W+++I+G +N ++DAI FR+M E +
Sbjct: 199 LISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHE--GGL 256
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
PN VTLV LSA H G L LGK IH ++ RN +++ F+ NAL DMY KCG + EA+
Sbjct: 257 APNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKG 316
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F ++ + SW+ +I A++G + + F EM+ + + P+ ++F+ LL ACTH
Sbjct: 317 VFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMI---EDGLEPNDISFMGLLTACTH 373
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GLV++G YF +M + Y I P+IEHYGC+VDLL RAGR ++A ++ M ++P+ +VWG
Sbjct: 374 AGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWG 433
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+LL GC+IY + E V +++E+D N+ G + LAN+Y +G+ D+ R ++D
Sbjct: 434 ALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNK 493
Query: 487 AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ KTPGCSWIE++ V++F D +HP++ IY + +
Sbjct: 494 SMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIREL 532
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 194/521 (37%), Positives = 298/521 (57%), Gaps = 25/521 (4%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT---LKLSNLTYARFIFDHLTTPN 76
+ C I L Q+ + GQ + A +++RFC L +L YA IF+ + N
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 77 TYLYTAMITAYA-SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ + +I ++ S A A +L+ +M+ +PN+F +P VLK+C + + K
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE---------MSDR-----NV 181
+H +K GF V + LV Y G + AR LF + M+DR +
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGF-MKDARVLFYKNIIEKDMVVMTDRRKRDGEI 208
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
V W MI GY R+GD K A LFD M R V +WN++I+G + NG F DA+ FR M
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK-- 266
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+IRPN VTLV L AI G L+LG+ +H Y +G+ +D + +ALIDMY KCG +
Sbjct: 267 -KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGII 325
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
++A F+R ++ + +W++MIN FA+HGQ+ ++I F +M + +RP V +I+LL
Sbjct: 326 EKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM---RQAGVRPSDVAYINLL 382
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
AC+HGGLVE+GR YF M +EP+IEHYGC+VDLLGR+G +EA E + M I+PD
Sbjct: 383 TACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPD 442
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
+V+W +LL C++ G + + L+++ P++ G + L+N+Y G W EV ++R
Sbjct: 443 DVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLR 502
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+K+++ K PGCS I++D +H+F D +HP+ +EI L
Sbjct: 503 MKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSML 543
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 191/524 (36%), Positives = 298/524 (56%), Gaps = 14/524 (2%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
+ L Q ++L+ C+ I LKQ+ + + G SQ NF KL+ F + NL A +F
Sbjct: 15 RALQQHFFSLLQTCDTIKKLKQIHTQIIVNGFSQKNFLLVKLLSF-YITSGNLLNAHKVF 73
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
+ + P+T ++ MI + SQ LY MV + +PN+F Y ++ C
Sbjct: 74 ERIENPSTTVWNQMIRGH-SQSETPHKLVELYNRMVE-AEAEPNEFTYSFLIGGCARSRL 131
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGI--ARKLFDEMSDRNVVSWTAM 187
R + VH ++V +G+ V T+LVN Y+ +G G+ AR++FDE+ DRN+VSW ++
Sbjct: 132 LREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSL 191
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
++GY R GD+ A +FD MP+R+V +W ++IAGC Q G A+ F M ++
Sbjct: 192 LAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMR---RAGVK 248
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYV----YRNGLDLDSFISNALIDMYGKCGSLKE 303
+QV LV ALSA G L+LG IH Y+ + L ++N+LI MY CG + +
Sbjct: 249 LDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDK 308
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A + F ++ SW SMI FA G +E ++ VF+ M R RPDG+TFI +L A
Sbjct: 309 AYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCA 368
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C+H G V+QGR +F+ M K + I P+IEHYGC+VDLL RAG +EA +++ M ++P++
Sbjct: 369 CSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDA 428
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKL-IEIDPNN-GGYGIMLANIYGELGKWDEVRKVRKM 481
VWG+LL GC+I+ + A +KL +E+ P+ GY ++L+N+Y +W +V VR+
Sbjct: 429 VWGALLGGCRIHKNAELASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQK 488
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ + K G SW++++ VH F + D TH +Y+ L +
Sbjct: 489 MVEIGVRKPAGRSWVQINGVVHDFVAGDWTHKHASSVYEMLSKI 532
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 189/516 (36%), Positives = 299/516 (57%), Gaps = 10/516 (1%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDH 71
NQ L LE C +N +KQ + L T G A KL++ +L+YA +FD
Sbjct: 15 NQLQLFSLESCKSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQ 74
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ P+ ++Y MI A+A P + ++ ++ MVR PN++ + V K+C + L
Sbjct: 75 IPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVL 134
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
+ + +K G E V A++ Y+ G + AR++FD D+++ SW MI GY
Sbjct: 135 EGEQIRVHAIKIGLESNLFVTNAMIRMYANWGL-VDEARRVFDWSLDQDLYSWNIMIGGY 193
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
G+I A +FD M +RDV +W ++IAG Q G F +A+ F M + PN+
Sbjct: 194 VGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEM---LQTGPPPNEF 250
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF--D 309
TL AL+A + L G+ IH Y+ ++ + ++ + +L+DMY KCG + A + F +
Sbjct: 251 TLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDE 310
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
K ++ WN+MI +A+HG+S+ +I +FE+M + + P+ VTF++LLNAC+HG L
Sbjct: 311 YGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQM---KVEKVSPNKVTFVALLNACSHGKL 367
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
VE+GR YFK M +Y IEP+IEHYGC+VDLLGR+G +EA E V M + PD +WG+LL
Sbjct: 368 VEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALL 427
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
C+I+ + + K + E+D ++ G ++LAN+Y G+WDE + VR+ ++ K
Sbjct: 428 GACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKK 487
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
TPGCS IE++ HQF D++HP+T+++Y L+ M
Sbjct: 488 TPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEM 523
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 187/517 (36%), Positives = 306/517 (59%), Gaps = 9/517 (1%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFI 68
N N Q+L++ C + HLKQ+ + + T S A + + + L YA+ I
Sbjct: 63 NPPSNPQILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLAYAKTI 122
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
F HL P LY ++I A +S A LY M++ G +P+ YP V+K+C +
Sbjct: 123 FHHLQNPPPSLYNSLIRALSSSKT-PLEALPLYHTMLQSGL-KPDHMTYPFVIKACNESS 180
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ +VHT +VKSGFE + ++L++ Y+ +G D+G A++LF+ S R+VVSW AMI
Sbjct: 181 VTWFGLLVHTHVVKSGFECDSYIVSSLIHLYA-NGKDLGAAKQLFNLCSARDVVSWNAMI 239
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
GY + ++ +A +FD M RDV +WN++I G G ++A++ F +M + ++P
Sbjct: 240 DGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMR---AVGVKP 296
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
+ T+V LSA H G L G +H Y+ N ++++S + AL+DMY KCG + A + F
Sbjct: 297 TEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVF 356
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
+ K + +WN++I A+HG + + +F+EM ++ + P+ +TF+++L+AC+H G
Sbjct: 357 NAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEM---KEAGVEPNDITFVAILSACSHAG 413
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
+V++G+ M+ +Y IEP++EHYGC++DLL RAG EEA+E++ M +EP+ G+L
Sbjct: 414 MVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGAL 473
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L GC+I+G + E K+LI + P + G I+L+NIY KWD+ RKVR ++K
Sbjct: 474 LGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGIS 533
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PG S IE+ VH+F + D +HP + +IY+ L +
Sbjct: 534 KVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEI 570
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 180/454 (39%), Gaps = 82/454 (18%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
KL N+ Y+R F +Y +I S A L M R P N
Sbjct: 17 KLENIFYSRNFF--------VMYQELIEGGPKFCCGWSDA-KLQSSMSRTPNPLTNPPSN 67
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
P +L R K VH QI+ + + A +++ S + A+ +F +
Sbjct: 68 PQILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLAYAKTIFHHLQ 127
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+ SL+ NS+I + + +A+ +
Sbjct: 128 NP--------------------PPSLY-----------NSLIRALSSSKTPLEALPLYHT 156
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS--------- 288
M + ++P+ +T + A + + G ++H +V ++G + DS+I
Sbjct: 157 M---LQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYAN 213
Query: 289 ----------------------NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSF 326
NA+ID Y K + AR FDR + + SWN+MIN +
Sbjct: 214 GKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGY 273
Query: 327 ALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRI 386
A+ G+ ++ +F++M ++P T +SLL+AC H G +++G + RI
Sbjct: 274 AICGKPNEALALFDQMRAV---GVKPTEATVVSLLSACAHLGALDKG-LHLHTYINDNRI 329
Query: 387 EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
E LVD+ + G+ A +V M+ D + W +++ G I+G A+ K
Sbjct: 330 EVNSIVGTALVDMYAKCGKISLATQVFNAME-SKDVLAWNTIIAGMAIHGNVKEAQQLFK 388
Query: 447 KLIE--IDPNNGGYGIMLANIYGELGKWDEVRKV 478
++ E ++PN+ + +L+ G DE +K+
Sbjct: 389 EMKEAGVEPNDITFVAILSAC-SHAGMVDEGQKL 421
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/465 (39%), Positives = 287/465 (61%), Gaps = 11/465 (2%)
Query: 64 YARFIFDHLTT--PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
YA+ IF+ + P T+++ + + A A + + YR +R+ P+ F VL
Sbjct: 78 YAQQIFECVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYR--LRQYDVCPDTFTCSSVL 135
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
++C ++L+ +++H + K GF ++ +V+ Y+ G ++G AR LF++M R+V
Sbjct: 136 RACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCG-EMGEARLLFEKMPQRDV 194
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
V+W MI+ + GD + A LF MP+R+V +W S+IAG Q G +AI F +M
Sbjct: 195 VTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKME-- 252
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
++ N+VT+V L+A G L LG IH Y R+G + ISN LIDMY KCG L
Sbjct: 253 -EAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCL 311
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+EA + F+ ++ + SW++MI A+HG++E ++ +F +M + I P+GVTFI LL
Sbjct: 312 EEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQV---GIEPNGVTFIGLL 368
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
+AC+H GL+ +GR +F MT+ Y I PQIEHYGC+VDLL RAG EA E + M ++P+
Sbjct: 369 HACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPN 428
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
VVWG+LL C+++ + AE A+K L+E+DP N GY ++L+NIY E G+W++ +VRK
Sbjct: 429 GVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKF 488
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+KDR KTPG S I VD VH+F + +++HP TE+I+ E ++
Sbjct: 489 MKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELL 533
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 190/510 (37%), Positives = 292/510 (57%), Gaps = 17/510 (3%)
Query: 24 NHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAM 83
N + HLK + + L LG + ++ K++RF + N Y+ IF PN +L+ M
Sbjct: 21 NSLKHLKHVHAALLRLGLDEDSYLLNKVLRF-SFNFGNTNYSHRIFHQTKEPNIFLFNTM 79
Query: 84 ITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKS 143
I + S +Y M + G P+ F +P +LK+C +L+S+ +H +VK+
Sbjct: 80 IHGLVLNDSFQES-IEIYHSMRKEGL-SPDSFTFPFLLKACARLLDSKLGIKLHGLVVKA 137
Query: 144 GFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGD------- 196
G E V T+LV+ Y + G I A K+FD++ ++NV +WTA+ISGY VG
Sbjct: 138 GCESDAFVNTSLVSLYGKCGF-IDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDM 196
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
+ A S+FD M ++D+ +W+S+I G NGL +A+ F +M +++ RP+ +V
Sbjct: 197 FRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKM---LNEGFRPDCYAMVGV 253
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
L A G L+LG + RN + + ALIDMY KCG + A F KK +
Sbjct: 254 LCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDI 313
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
WN+ I+ A+ G + + +F +M + I PDG TF+ LL ACTH GLV++GR Y
Sbjct: 314 VVWNAAISGLAMSGHVKAAFGLFGQM---EKSGIEPDGNTFVGLLCACTHAGLVDEGRQY 370
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
F M + + + P+IEHYGC+VDLLGRAG +EA ++VK M +E + +VWG+LL GC+++
Sbjct: 371 FNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHR 430
Query: 437 RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWI 496
T E +K+LI ++P+N G ++L+NIY KW++ K+R ++ +R K PG SWI
Sbjct: 431 DTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWI 490
Query: 497 EVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
EVD VH+F D +HP +E+IY L +V
Sbjct: 491 EVDGVVHEFLVGDTSHPLSEKIYAKLGELV 520
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/511 (37%), Positives = 297/511 (58%), Gaps = 15/511 (2%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTY 78
+++ +HL Q+ + L G FKL R L +L ++ +F PN +
Sbjct: 29 LIDNSKSTHHLLQIHAALLRRGLHHHPILNFKLQR-SYASLGHLHHSVTLFHRTPNPNVF 87
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHT 138
L+T +I A+A A S Y M+ QPN F +LK+C + VH+
Sbjct: 88 LWTHIINAHAHFDLF-HHALSYYSQMLTH-PIQPNAFTLSSLLKAC----TLHPARAVHS 141
Query: 139 QIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIK 198
+K G + V T LV++Y+R G D+ A+KLFD M +R++VS+TAM++ Y + G +
Sbjct: 142 HAIKFGLSSHLYVSTGLVDAYAR-GGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLP 200
Query: 199 NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD----NIRPNQVTLV 254
A LF+ M +DV WN +I G Q+G ++A+ FFR+M M + +RPN++T+V
Sbjct: 201 EARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVV 260
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
LS+ G G L+ GK +H YV NG+ ++ + AL+DMY KCGSL++AR+ FD K
Sbjct: 261 AVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGK 320
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ +WNSMI + +HG S+ ++ +F EM C ++P +TF+++L AC H GLV +G
Sbjct: 321 DVVAWNSMIMGYGIHGFSDEALQLFHEMC-CI--GVKPSDITFVAVLTACAHAGLVSKGW 377
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
F M Y +EP++EHYGC+V+LLGRAGR +EA ++V+ M++EPD V+WG+LL C+I
Sbjct: 378 EVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRI 437
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+ E + L+ + G ++L+N+Y W V KVR M+K K PGCS
Sbjct: 438 HSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCS 497
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
IEV +VH+F + D+ HPR+++IY LE M
Sbjct: 498 SIEVKNRVHEFVAGDRRHPRSKDIYSMLEKM 528
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/525 (36%), Positives = 282/525 (53%), Gaps = 68/525 (12%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A +FD + PN ++ AM Y+ +H L+R M + PN F +P +LKSC
Sbjct: 4 AHKVFDQIPEPNASIWNAMFRGYSQNESH-KDVIVLFRQM-KGLDVMPNCFTFPVILKSC 61
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVE-------------------------------T 153
+ + + VH ++KSGF P V T
Sbjct: 62 VKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWT 121
Query: 154 ALVNSYSR------------------------------SGNDIGIARKLFDEMSDRNVVS 183
A++N Y D+ AR+LFD+M +++V+S
Sbjct: 122 AMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMS 181
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
W +++GY GD+ LF+ MP+R+V +WN++I G T+NG FS+ +S F+RM V
Sbjct: 182 WNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRM--LVD 239
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
+ PN TLV LSA G L LGK +H Y +G + ++ NAL+DMY KCG ++
Sbjct: 240 GTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVET 299
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A F K L SWN++I A+HG +++ +F M ++ PDG+TFI +L A
Sbjct: 300 ALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGEN---PDGITFIGILCA 356
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
CTH GLVE G +YFK MT Y I P+IEHYGC+VDLLGRAG A++ ++ M IE D V
Sbjct: 357 CTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAV 416
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+W +LL C++Y + AE A++KLIE +P N +ML+NIYG+ G+W +V +++ ++
Sbjct: 417 IWAALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMR 476
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
D K PGCS IEV+ + +F+SLD+ HP E+IY L ++ L
Sbjct: 477 DTGFKKLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTLTKL 521
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 116/276 (42%), Gaps = 38/276 (13%)
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM-GMEVSDNIRPNQVTLVC 255
++NA +FD +P+ + WN++ G +QN D I FR+M G++V PN T
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDV----MPNCFTFPV 56
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
L + L+ G+ +H +V ++G + F++ LIDMY G++ A R F ++
Sbjct: 57 ILKSCVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERN 116
Query: 316 LTSWNSMINSFA-----------LHGQSENSICVFEEMM-------------RCQDHNIR 351
+ +W +MIN + E I ++ M+ D
Sbjct: 117 VIAWTAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPN 176
Query: 352 PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALE 411
D +++ ++LN G V F+ M E + + L+ R G F E L
Sbjct: 177 KDVMSWNTVLNGYASNGDVMACERLFEEMP-----ERNVFSWNALIGGYTRNGCFSEVLS 231
Query: 412 VVKGMKIE----PDEVVWGSLLNGCKIYGRTDFAEF 443
K M ++ P++ ++L+ C G D ++
Sbjct: 232 AFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKW 267
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/514 (36%), Positives = 302/514 (58%), Gaps = 15/514 (2%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
++++ C IN +KQ + L T Q A K ++ + L++LTYA +FD + P+
Sbjct: 184 SLIDLCKSINQIKQTHANLITTAQITLPVIANKFLK--NVALASLTYAHKLFDQIPQPDL 241
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
++Y MI +++ P + +++R ++R PN++ + +C + + R + V
Sbjct: 242 FIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGACGNGMCVREGEQVF 301
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
T VK G + V AL+ + + G + AR +FD DR+ SW MI Y G++
Sbjct: 302 THAVKVGLDGNVFVVNALIGMFGKWGR-VEDARNVFDSAVDRDFYSWNTMIGAYVGSGNM 360
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
A LFD M +RDV +W+++IAG Q G F +A+ FF +M + ++PN+ T+V AL
Sbjct: 361 VLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKM---LQSEVKPNEYTMVSAL 417
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF-DRNSKKRL 316
+A + L GK IH Y+ R+ + ++ + +LIDMY KCG + A F + K+++
Sbjct: 418 AACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKV 477
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
WN+MI FA+HG+ E +I VFE+M + + P+ VTFI+LLNAC+HG +V++G++Y
Sbjct: 478 WPWNAMIGGFAMHGKPEEAINVFEKM---KVEKVSPNKVTFIALLNACSHGYMVKEGKSY 534
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
F+LM Y I P+IEHYGC+VDLL R+G +++ E++ M + PD +WG+LLN C+IY
Sbjct: 535 FELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNACRIYK 594
Query: 437 RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVR---KMLKDRNAYKTPGC 493
+ + + EIDPN+ G ++L NIY G+W+E R VR ++ DR K PG
Sbjct: 595 DMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMVREKNEINSDRK--KIPGF 652
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
S IE++ H+F D++HP++ EIY L+ M++
Sbjct: 653 SSIELNGVFHEFLVGDRSHPQSREIYSFLDEMIS 686
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 189/515 (36%), Positives = 290/515 (56%), Gaps = 16/515 (3%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHLTTPNTY 78
+ RC HLKQ+ + GQ A +L++F TL + YAR F + PN +
Sbjct: 22 ISRCKTTRHLKQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHHPNCF 81
Query: 79 LYTAMITAYASQPA----HASS--AFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
+ +I A A H +S A + M+ G +PN+F +P VLK+C +
Sbjct: 82 SWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEE 141
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
K +H +VK G V + LV Y G + + NVV W MI GY
Sbjct: 142 GKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYV 201
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
R+GD++ + LFDSMP++ V +WN +I+GC QNG F +AI F M + ++ PN VT
Sbjct: 202 RMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQL---GDVPPNYVT 258
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD--R 310
LV L A+ G ++LGK +H + +N +++D + +ALIDMY KCGS+ +A + F+ R
Sbjct: 259 LVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIR 318
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
N K +T W+++I A+HG++ +++ + R Q + P V +I +L+AC+H GLV
Sbjct: 319 NKKNPIT-WSAIIGGLAMHGRARDAL---DHFWRMQQAGVTPSDVVYIGVLSACSHAGLV 374
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
E+GR+ + M + P+IEHYGC+VDLLGRAG EEA +++ M ++PD+V+ +LL
Sbjct: 375 EEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLG 434
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
CK++G + E K L+ P++ G + L+N++ G W+ V KVR +K+ + K
Sbjct: 435 ACKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIRKD 494
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PGCSWIE+D +H+F D +HPR E I+ LE M
Sbjct: 495 PGCSWIELDGVIHEFLVEDDSHPRAEGIHSMLEEM 529
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 158/436 (36%), Gaps = 111/436 (25%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL------------------ 57
VL + I KQL F+ LG F LVR +
Sbjct: 129 VLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEG 188
Query: 58 -------------KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM 104
++ +L +R +FD + + + MI+ A Q H A ++ DM
Sbjct: 189 NVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCA-QNGHFKEAIEMFHDM 247
Query: 105 VRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN 164
+ G PN VL + + K VH K+ E V+ +AL++ YS+ G+
Sbjct: 248 -QLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGS 306
Query: 165 DIGIARKLFDEMSD-RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCT 223
I A ++F+ + + +N ++W+A +I G
Sbjct: 307 -IDKAVQVFEGIRNKKNPITWSA-------------------------------IIGGLA 334
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL 283
+G DA+ F RM + P+ V + LSA H G+++ G+ I+ Y N + L
Sbjct: 335 MHGRARDALDHFWRMQ---QAGVTPSDVVYIGVLSACSHAGLVEEGRSIY-YHMVNIVGL 390
Query: 284 DSFISN--ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEE 341
I + ++D+ G+ G L+EA +
Sbjct: 391 LPRIEHYGCMVDLLGRAGCLEEAEQLI--------------------------------- 417
Query: 342 MMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG 401
+ ++PD V +LL AC G +E G K++ Y + Y L ++
Sbjct: 418 ----LNMPVKPDDVILKALLGACKMHGNIEMGERIAKILMGWYPHDSG--SYVALSNMFA 471
Query: 402 RAGRFEEALEVVKGMK 417
G +E ++V MK
Sbjct: 472 SEGNWEGVVKVRLKMK 487
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 185/465 (39%), Positives = 286/465 (61%), Gaps = 11/465 (2%)
Query: 64 YARFIFDHLTT--PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
YA+ IF + P T+++ + + A A + + YR +R+ P+ F VL
Sbjct: 78 YAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYR--LRQYDVCPDTFTCSSVL 135
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
++C ++L+ +++H + K GF ++ +V+ Y+ G ++G AR LF++M R+V
Sbjct: 136 RACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCG-EMGEARLLFEKMPQRDV 194
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
V+W MI+ + GD + A LF MP+R+V +W S+IAG Q G +AI F +M
Sbjct: 195 VTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKME-- 252
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
++ N+VT+V L+A G L LG IH Y R+G + ISN LIDMY KCG L
Sbjct: 253 -EAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCL 311
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+EA + F+ ++ + SW++MI A+HG++E ++ +F +M + I P+GVTFI LL
Sbjct: 312 EEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQV---GIEPNGVTFIGLL 368
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
+AC+H GL+ +GR +F MT+ Y I PQIEHYGC+VDLL RAG EA E + M ++P+
Sbjct: 369 HACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPN 428
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
VVWG+LL C+++ + AE A+K L+E+DP N GY ++L+NIY E G+W++ +VRK
Sbjct: 429 GVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKF 488
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+KDR KTPG S I VD VH+F + +++HP TE+I+ E ++
Sbjct: 489 MKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELL 533
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 180/495 (36%), Positives = 294/495 (59%), Gaps = 14/495 (2%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMIT 85
+N LKQ+ ++ G T F KL L+L +L YA +FD + P+ YLY I
Sbjct: 1 MNQLKQIHAYSLRNGLDHTKFLIEKL-----LQLPDLPYACTLFDQIPKPSVYLYNKFIQ 55
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
++S H + LY M +G PNQ+ + + +C + +M+H+ KSGF
Sbjct: 56 TFSSI-GHPHRCWLLYCQMCSQGC-SPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGF 113
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
TAL++ Y++ G + AR+LFDEM R++ +W ++I+GY R G ++ A LF+
Sbjct: 114 ASDMFAMTALLDMYAKLGM-LRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFN 172
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
MP R+V +W ++I+G QNG ++ A+ F +G+E +PN+V++ L A G
Sbjct: 173 KMPVRNVISWTALISGYAQNGKYAKALEMF--IGLENEKGTKPNEVSIASVLPACSQLGA 230
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR-NSKKRLTSWNSMIN 324
L +GK I Y NG ++++SNA+++++ +CG+++EA++ FD SK+ L SWN+MI
Sbjct: 231 LDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIM 290
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
A+HG+ +++ ++++M+ +RPD VTF+ LL ACTHGG+V +GR F+ M +
Sbjct: 291 GLAVHGRCIDALQLYDQML---IRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKF 347
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
++ P++EHYGCLVDLLGRAG +EA +++ M + PD V+WG+LL C +G + E A
Sbjct: 348 QVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVA 407
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
+ L +++P N G ++L+NIY G W V ++RKM+K + K G S+IEV +H+
Sbjct: 408 AESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEVGDGIHE 467
Query: 505 FHSLDKTHPRTEEIY 519
F D+ R + +
Sbjct: 468 FIVEDRITSRCVQPF 482
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 195/537 (36%), Positives = 297/537 (55%), Gaps = 57/537 (10%)
Query: 30 KQLQSFLTTLG--------QSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYT 81
K++ SF+ LG S N YA K +L A+ +FD + NT +
Sbjct: 127 KKVHSFVVKLGLHACVPVANSLLNMYA---------KTGDLKMAKVVFDRMKLRNTSSWN 177
Query: 82 AMIT------------------------------AYASQPAHASSAFSLYRDMVRRGQPQ 111
AMI+ A +Q + A + +++ +
Sbjct: 178 AMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLK 237
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
P++F L +C ++ + K +H IV++ F+ V AL++ Y++SG + IAR+
Sbjct: 238 PDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGG-VEIARR 296
Query: 172 LFDE--MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
+ ++ +SD +V+++TA+++GY ++GDI A +F+S+ D DV AW ++I G QNGL +
Sbjct: 297 IIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNN 356
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
DAI F+ M VS+ RPN TL LSA L GK IH R+G L + N
Sbjct: 357 DAIEVFKTM---VSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN 413
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLT-SWNSMINSFALHGQSENSICVFEEMMRCQDH 348
AL MY K GS+ AR+ F+ + R T SW SMI + A HG E +I +FE+M+
Sbjct: 414 ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTL--- 470
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
I+PD +T++ +L+ACTHGGLVEQGR+YF LM ++I+P + HY C+VDL GRAG +E
Sbjct: 471 GIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQE 530
Query: 409 ALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGE 468
A + V+ M +EPD + WGSLL+ CK+Y D A+ A ++L+ I+PNN G LAN+Y
Sbjct: 531 AYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSS 590
Query: 469 LGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
GKWD+ K+RK++K R K G SW+++ + H F D HP+ +EIY ++ +
Sbjct: 591 CGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKI 647
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 225/493 (45%), Gaps = 85/493 (17%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L A +FD + ++ +T +I Y +Q A ++ DMV+ + P QF
Sbjct: 53 KQGKLEKAHQVFDLIPVRDSVSWTTIIVGY-NQMGRFEDAIKIFVDMVK-DKVLPTQFTL 110
Query: 118 PHVLKSCPDVLESRGT-KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+VL SC SRG K VH+ +VK G V +L+N Y+++G D+ +A+ +FD M
Sbjct: 111 TNVLASCA-ATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTG-DLKMAKVVFDRM 168
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
RN SW AMIS + G + A + F+ + +RD+ +WNS+IAGC Q+G ++A+ FF
Sbjct: 169 KLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFS 228
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+ + S ++P++ +L ALSA + L GK IHGY+ R D + NALI MY
Sbjct: 229 SILKDTS--LKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYA 286
Query: 297 KCGSLKEARRAFDR-------------------------------NSKK--RLTSWNSMI 323
K G ++ ARR ++ NS K + +W +MI
Sbjct: 287 KSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMI 346
Query: 324 NSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT-----------HGGLVEQ 372
+ +G + ++I VF+ M+ RP+ T ++L+A + H +
Sbjct: 347 VGYVQNGLNNDAIEVFKTMV---SEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRS 403
Query: 373 GRAYF----KLMTKTYRIEPQIE----------------HYGCLVDLLGRAGRFEEALEV 412
G A +T Y I + ++ L + G EEA+E+
Sbjct: 404 GEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIEL 463
Query: 413 VKGM---KIEPDEVVWGSLLNGCK-----IYGRTDFAEFAVKKLIEIDPNNGGYGIMLAN 464
+ M I+PD + + +L+ C GR+ F +K + +IDP Y M+ +
Sbjct: 464 FEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFD--LMKNVHKIDPTLSHYACMV-D 520
Query: 465 IYGELGKWDEVRK 477
++G G E K
Sbjct: 521 LFGRAGLLQEAYK 533
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 153/324 (47%), Gaps = 39/324 (12%)
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
+VK G + L+N Y+++G + A LF+EM + SW ++SGY + G ++
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLD-AHDLFNEMPVKTTFSWNTILSGYAKQGKLEK 59
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
A +FD +P RD +W ++I G Q G F DAI F M V D + P Q TL L++
Sbjct: 60 AHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDM---VKDKVLPTQFTLTNVLAS 116
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN-------- 311
TG +GK +H +V + GL ++N+L++MY K G LK A+ FDR
Sbjct: 117 CAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSW 176
Query: 312 -----------------------SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDH 348
S++ + SWNSMI HG ++ F +++ D
Sbjct: 177 NAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILK--DT 234
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
+++PD + S L+AC + + G+ + +T + L+ + ++G E
Sbjct: 235 SLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTM-FDASGAVGNALISMYAKSGGVEI 293
Query: 409 ALEVVKGMKI-EPDEVVWGSLLNG 431
A +++ I + D + + +LLNG
Sbjct: 294 ARRIIEQSGISDLDVIAFTALLNG 317
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/505 (37%), Positives = 284/505 (56%), Gaps = 15/505 (2%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLT--YARFIFDHLTTPNTYLYTAM 83
I +KQ + + LG + L+ F + S+L YA I++ ++ P + M
Sbjct: 44 ITQIKQAHARILVLGLANDGRITSHLLAFLAISSSSLPSDYALSIYNSISHPTVFATNNM 103
Query: 84 ITAYASQ--PAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIV 141
I + P H+ SLY M R PN+ VL++C + R V T ++
Sbjct: 104 IRCFVKGDLPRHS---ISLYSHMCRSFVAAPNKHTLTFVLQACSNAFAIREGAQVQTHVI 160
Query: 142 KSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM-SDRNVVSWTAMISGYTRVGDIKNA 200
K GF + V AL++ Y + A+++FDE+ S R+VVSW +MI G+ R+G I A
Sbjct: 161 KLGFVKDVFVRNALIHLYCTCCR-VESAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISVA 219
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
LF MP++DV +W ++I+GC QNG A+ +F+ +G +RPN+ LV L+A
Sbjct: 220 QKLFVEMPEKDVISWGTIISGCVQNGELEKALDYFKELG---EQKLRPNEAILVSLLAAA 276
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
G L+ GK IH + + + AL+DMY KCG + E+R FDR +K SWN
Sbjct: 277 AQLGTLEYGKRIHSIANSLRFPMTASLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWN 336
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
MI A HG + ++ +FE+ + P VTFI +L AC+ GLV +G+ +FKLM
Sbjct: 337 VMICGLATHGLGQEALALFEKFL---TQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLM 393
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
T TY IEP++EHYGC+VDLL RAG +A+E++ M PD V+W S+L C+++G +
Sbjct: 394 TDTYGIEPEMEHYGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLWASVLGSCQVHGFIEL 453
Query: 441 AEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDK 500
E KLI++DP + G+ + LA I+ L KW++V KVR+++ +RN+ K G S IE +
Sbjct: 454 GEEIGNKLIQMDPTHNGHYVQLARIFARLRKWEDVSKVRRLMAERNSNKIAGWSLIEAEG 513
Query: 501 QVHQFHSLDKTHPRTEEIYDALESM 525
+VH+F + DK H RT EIY LE M
Sbjct: 514 RVHRFVAGDKEHERTTEIYKMLEIM 538
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 183/462 (39%), Positives = 277/462 (59%), Gaps = 9/462 (1%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
+L AR +FD + + +MI Y + A A + YR+M G +P++ V
Sbjct: 157 DLDGARKMFDKSCVRDLVSWNSMINGYVRR-GWAYEALNFYREMKVEG-IKPDEVTMIGV 214
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
+ SC + + + H I ++G + + AL++ Y + GN + ARKLFD M+++
Sbjct: 215 VSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGN-LESARKLFDSMTNKT 273
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
+VSWT M+ GY + G + A LFD MPD+DV WN++I G +A++ F M
Sbjct: 274 MVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQ- 332
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ NI P++VT+V LSA G L +G IH Y+ ++ L L+ + ALIDMY KCG
Sbjct: 333 --AMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGK 390
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+ +A + F + +W ++I+ ALHG + +I F EM+ D+++ PD VTF+ L
Sbjct: 391 ITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMI---DNSVMPDEVTFLGL 447
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC HGGLVE+GR YF M+ + + P+++HY C+VDLLGRAG EEA E++K M IE
Sbjct: 448 LSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEA 507
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
D VVWG+L C+I+G E A KL+++DP++ G ++LAN+YGE W E K RK
Sbjct: 508 DAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARK 567
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+++ R KTPGCS IEV+ V++F DK+HP++E+IY+ L
Sbjct: 568 LMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECL 609
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 213/449 (47%), Gaps = 67/449 (14%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL-KLSNLTYARFIFDHLTTP 75
L++LE+C I+ LKQ+QS + G + F + +L+ FC + + +L Y I + P
Sbjct: 10 LSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNP 69
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
NT+ + I + + A LY+ +++ +P+ + YP + K+C + R
Sbjct: 70 NTFSWNVAIRGFLDSE-NPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSE 128
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+ ++ GF+ V A+++ G D+ ARK+FD+ R++VSW +MI+GY R
Sbjct: 129 ILGHVLHLGFDSDIFVSNAVIHLLVSCG-DLDGARKMFDKSCVRDLVSWNSMINGYVR-- 185
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
G +A++F+R M +E I+P++VT++
Sbjct: 186 -----------------------------RGWAYEALNFYREMKVE---GIKPDEVTMIG 213
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
+S+ L LG+ H Y+ NGL L ++NAL+DMY KCG+L+ AR+ FD + K
Sbjct: 214 VVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKT 273
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMM----------------------------RCQD 347
+ SW +M+ +A G + + +F+EM Q
Sbjct: 274 MVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQA 333
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE 407
NI PD VT +S L+AC+ G ++ G + + + + + L+D+ + G+
Sbjct: 334 MNINPDEVTMVSCLSACSQLGALDVG-IWIHHYIEKHELSLNVALGTALIDMYAKCGKIT 392
Query: 408 EALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
+A++V + + + + W ++++G ++G
Sbjct: 393 KAIQVFQELP-GRNSLTWTAIISGLALHG 420
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 12/250 (4%)
Query: 214 AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH 273
+WN I G + +A+ ++R+ D +P+ T A ++++G I
Sbjct: 73 SWNVAIRGFLDSENPREAVVLYKRVLQ--CDGTKPDNYTYPLLFKACARLSLIRMGSEIL 130
Query: 274 GYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSE 333
G+V G D D F+SNA+I + CG L AR+ FD++ + L SWNSMIN + G +
Sbjct: 131 GHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAY 190
Query: 334 NSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
++ + EM + I+PD VT I ++++C ++ GR + + ++ +
Sbjct: 191 EALNFYREM---KVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEEN-GLKLTVPLA 246
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD-----FAEFAVKKL 448
L+D+ + G E A ++ M V W +++ G G D F E K +
Sbjct: 247 NALMDMYMKCGNLESARKLFDSMT-NKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDV 305
Query: 449 IEIDPNNGGY 458
+ + GGY
Sbjct: 306 VPWNAMIGGY 315
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/512 (33%), Positives = 298/512 (58%), Gaps = 11/512 (2%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL--KLSNLTYARFIFDHLT 73
++ ++ C + L+ + T +G+ + A + + K + AR IFD
Sbjct: 243 MVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECV 302
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
N LY +++ Y Q A ++ +M++ G P+P++ + +C ++ +
Sbjct: 303 DKNLVLYNTIMSNYVRQ-GLAREVLAVLGEMLKHG-PRPDRITMLSAVSACSELDDVSCG 360
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
K H ++++G E + V A++N Y + G +A ++FD M ++ VSW ++I+G+ R
Sbjct: 361 KWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQ-EMACRVFDRMLNKTRVSWNSLIAGFVR 419
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
GD+++A +F +MPD D+ +WN++I Q +F +AI FR M S+ I ++VT+
Sbjct: 420 NGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQ---SEGITADKVTM 476
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
V SA G+ G L L K IHGY+ + + D + AL+DM+ +CG + A + F++ K
Sbjct: 477 VGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVK 536
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ +++W + I + A+ G +I +F+EM++ I+PDGV F++LL A +HGGLVEQG
Sbjct: 537 RDVSAWTAAIGAMAMEGNGTGAIELFDEMLQ---QGIKPDGVVFVALLTALSHGGLVEQG 593
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
F+ M Y I PQ HYGC+VDLLGRAG EAL ++ M++EP++V+WGSLL C+
Sbjct: 594 WHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACR 653
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
++ D A +A +++ E+DP G ++L+NIY G+WD+V KVR LK++ A+K PG
Sbjct: 654 VHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGS 713
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
S IE++ ++ +F + D++HP I L+ +
Sbjct: 714 SSIEINGKIFEFTTGDESHPEMTHIEPMLKEI 745
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 195/423 (46%), Gaps = 57/423 (13%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL--KLSNLTYAR-----FIFDHL 72
++C + LKQL S +T G + L+ CT +L YA+ FI D+
Sbjct: 40 FKKCKTMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNG 99
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
Y+++++I + S A ++R ++ G P+ F +P VL +C
Sbjct: 100 IMGTHYMFSSLIRGF-SACGLGYKAIVVFRQLMCMG-AVPDNFTFPFVLSACTKSAALTE 157
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
VH IVK GFE+ VE +L++ Y G +I R++
Sbjct: 158 GFQVHGAIVKMGFERDMFVENSLIHFYGECG-EIDCMRRV-------------------- 196
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
FD M +R+V +W S+I G + G + +A+S F M V IRPN VT
Sbjct: 197 -----------FDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEM---VEVGIRPNSVT 242
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
+V +SA LQLG+ + + L++++ + NAL+DMY KCG++ +AR+ FD
Sbjct: 243 MVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECV 302
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
K L +N++++++ G + + V EM++ H RPD +T +S ++AC+ V
Sbjct: 303 DKNLVLYNTIMSNYVRQGLAREVLAVLGEMLK---HGPRPDRITMLSAVSACSELDDVSC 359
Query: 373 GRAYFKLMTKTYRIEPQIEHY----GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
G+ Y + +E + ++++ + G+ E A V M + V W SL
Sbjct: 360 GK-----WCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRM-LNKTRVSWNSL 413
Query: 429 LNG 431
+ G
Sbjct: 414 IAG 416
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 183/510 (35%), Positives = 297/510 (58%), Gaps = 12/510 (2%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN---LTYARFIFDHLTTPN 76
LE C+ + HLK + +++ F A +L+ FC S + YA IF + PN
Sbjct: 24 LETCSDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPN 83
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
+++ AMI + S + AF Y R+G P+ +P ++KSC +
Sbjct: 84 LFIFNAMIRGH-SGSKNPDQAFHFYVQSQRQGL-LPDNLTFPFLVKSCTKLHCISMGSQA 141
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGD 196
H I+K GFE+ V+ +LV+ Y+ G D A +F M +VVSWT+MI G+ + GD
Sbjct: 142 HGHIIKHGFEKDVYVQNSLVHMYATFG-DTEAATLIFQRMYYVDVVSWTSMIRGFNKCGD 200
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
+++A LFD MP++++ W+++I+G QN F A+ F+ + S +R N+ +V
Sbjct: 201 VESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQ---SQGVRANETVMVSV 257
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
+S+ H G L+LG+ H YV +NG+ L+ + AL+DMY +CGS+ +A F+ ++
Sbjct: 258 ISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDT 317
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
SW ++I A+HG SE S+ F M+ + + P +TF ++L+AC+HGGLVE+G
Sbjct: 318 LSWTALIAGLAMHGYSERSLKYFATMV---EAGLTPRDITFTAVLSACSHGGLVERGFQI 374
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
F+ M + +R+EP++EHYGC+VDLLGRAG+ EEA V M ++P+ VWG+LL C+I+
Sbjct: 375 FESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHK 434
Query: 437 RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWI 496
+ E K LI++ P + GY ++L+NIY +W++V ++R+M+K + K PG S I
Sbjct: 435 NAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLI 494
Query: 497 EVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
E+D +VH+F D +HP ++I E ++
Sbjct: 495 ELDGRVHKFTIGDSSHPEMDKIERMWEEIL 524
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 184/516 (35%), Positives = 291/516 (56%), Gaps = 42/516 (8%)
Query: 42 SQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLY 101
+Q F + + C+ LS + A F ++ PN ++ A+I ++ A Y
Sbjct: 7 TQDCFLVNQFISACS-NLSCINLAASAFANVQNPNVLVFNALIRG-CVHCCYSEQALVHY 64
Query: 102 RDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSR 161
M+R P + + ++K+C +++S + VH + K GF+ + V+T L+ YS
Sbjct: 65 MHMLRN-NVMPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYST 123
Query: 162 SGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAG 221
G D+G +R++FD+M +R+V +WT MIS + R GD+ +A LFD MP+++V WN++I G
Sbjct: 124 FG-DVGGSRRVFDDMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDG 182
Query: 222 ------------------------------C-TQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
C ++N + + I+ F + + + P++
Sbjct: 183 YGKLGNAESAEFLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDV---IDKGMIPDE 239
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
VT+ +SA H G L LGK +H Y+ G DLD +I ++LIDMY KCGS+ A F +
Sbjct: 240 VTMTTVISACAHLGALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYK 299
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
K L WN +I+ A HG E ++ +F EM R IRP+ VTFIS+L ACTH G +
Sbjct: 300 LQTKNLFCWNCIIDGLATHGYVEEALRMFGEMER---KRIRPNAVTFISILTACTHAGFI 356
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
E+GR +F M + Y I PQ+EHYGC+VDLL +AG E+ALE+++ M +EP+ +WG+LLN
Sbjct: 357 EEGRRWFMSMVQDYCIAPQVEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLN 416
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK- 489
GCK++ + A AV+ L+ ++P+N G+ +L N+Y E +W+EV K+R +KD K
Sbjct: 417 GCKLHKNLEIAHIAVQNLMVLEPSNSGHYSLLVNMYAEENRWNEVAKIRTTMKDLGVEKR 476
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PG SW+E++K VH F + D HP +++ L +
Sbjct: 477 CPGSSWVEINKTVHLFAASDTYHPSYSQLHLLLAEL 512
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 193/514 (37%), Positives = 293/514 (57%), Gaps = 11/514 (2%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+ L R N I +Q + + G F A K+V +L A +FD + P
Sbjct: 83 IFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASS-GDLDSAVVVFDRIDNP 141
Query: 76 NTYLYTAMITAYASQPAHASSAFSL--YRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
++ LY ++I AY L Y M G N F P VLKSC D+
Sbjct: 142 SSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDN-FTLPFVLKSCADLSRVCMG 200
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+ VH Q ++ G E V +L++ Y + G IG ARKLFD+M R++ SW A+I+GY +
Sbjct: 201 RCVHGQGLRVGLEGDFYVGASLIDMYVKCGV-IGDARKLFDKMIVRDMASWNALIAGYMK 259
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
G+I A LF+ M R++ +W ++I+G TQNG A+ F M ++ ++PN VT+
Sbjct: 260 EGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEM-LQDGSEMKPNWVTI 318
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
V L A + L+ G+ IH + GL L+S + AL MY KC SL EAR FD ++
Sbjct: 319 VSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQ 378
Query: 314 --KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K L +WN+MI ++A HG ++ +FE M+R ++PD VTF+ LL+ C+H GL++
Sbjct: 379 NGKNLIAWNTMITAYASHGCGVEAVSIFENMLRA---GVQPDAVTFMGLLSGCSHSGLID 435
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
G +F M + +EP++EHY C+VDLLGRAGR EA E++ M ++ VWG+LL
Sbjct: 436 AGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAA 495
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C+ + + AE A ++L ++P+N G ++L+N+Y E G W+EV+K+R +LK + K+P
Sbjct: 496 CRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSP 555
Query: 492 GCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
GCSWIE++ + H F DK+HP+ +EIY LE++
Sbjct: 556 GCSWIEINGKSHLFMGADKSHPQAKEIYKFLEAL 589
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 182/498 (36%), Positives = 296/498 (59%), Gaps = 14/498 (2%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAY-- 87
+QL + G F LV+ L L AR +FD + + +I+AY
Sbjct: 138 RQLHGHVLKHGLQYNVFVHTALVQMYLL-CGQLDTARGVFDVCPKADVITWNMIISAYNK 196
Query: 88 ASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQ 147
+ + F + D Q P VL +C + + R K VH+ + E
Sbjct: 197 VGKFEESRRLFLVMED----KQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVES 252
Query: 148 YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM 207
V+E A+++ Y+ G ++ A +F M++R+++SWT ++SG+T +G+I A + FD M
Sbjct: 253 NLVLENAMIDMYADCG-EMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKM 311
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
P++D +W ++I G ++ F +A+ FR M + N++P++ T+V L+A H G L+
Sbjct: 312 PEKDYVSWTAMIDGYIRSNRFKEALELFRNMQ---ATNVKPDEFTMVSVLTACAHLGALE 368
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFA 327
LG+ I Y+ RN + D F+ NALIDMY KCG + +A F S++ +W +MI A
Sbjct: 369 LGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLA 428
Query: 328 LHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIE 387
++G E ++ +F M++ +I PD +T+I +L+ACTH GLV++GR YF MT + IE
Sbjct: 429 VNGHGEKALDMFSNMLKA---SILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIE 485
Query: 388 PQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKK 447
P I HYGCLVDLL RAGR +EA EV++ M I+ + +VWG+LL GC++Y +D AE VK+
Sbjct: 486 PNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQ 545
Query: 448 LIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHS 507
++E++P+NG ++L NIY +W+++R++R+M+ D+ KTPGCS IE++ +VH+F +
Sbjct: 546 ILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVA 605
Query: 508 LDKTHPRTEEIYDALESM 525
D++HP+T+ I L+ M
Sbjct: 606 GDRSHPQTKNIDAKLDKM 623
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 199/458 (43%), Gaps = 74/458 (16%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFC-TLKLSNLTYARFIFDHLTT 74
++++LE C ++ L+Q+ G + +++ FC T + + YAR +FD +
Sbjct: 21 LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 80
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
PN +++ MI Y S+ SLY +M+RRG +P+++ +P + K + +
Sbjct: 81 PNLFIWNTMIRGY-SRLDFPQLGVSLYLEMLRRG-VKPDRYTFPFLFKGFTRDIALEYGR 138
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H ++K G + V TALV Y G + AR +FD +V++W +IS Y +V
Sbjct: 139 QLHGHVLKHGLQYNVFVHTALVQMYLLCGQ-LDTARGVFDVCPKADVITWNMIISAYNKV 197
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + + LF M D+ V P VTLV
Sbjct: 198 GKFEESRRLFLVMEDKQV----------------------------------LPTTVTLV 223
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE----------- 303
LSA L+ GK +H YV ++ + + NA+IDMY CG +
Sbjct: 224 LVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNR 283
Query: 304 --------------------ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
AR FD+ +K SW +MI+ + + + ++ +F M
Sbjct: 284 DIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNM- 342
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
Q N++PD T +S+L AC H G +E G + + +I+ + L+D+ +
Sbjct: 343 --QATNVKPDEFTMVSVLTACAHLGALELGE-WIRTYIDRNKIKNDLFVRNALIDMYFKC 399
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
G ++A + + M + D+ W +++ G + G + A
Sbjct: 400 GDVDKAESIFREMS-QRDKFTWTAMIVGLAVNGHGEKA 436
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 145/336 (43%), Gaps = 41/336 (12%)
Query: 119 HVLKSCPDVLESRGT-KMVHTQIVKSGFEQYPVVETALVN-SYSRSGNDIGIARKLFDEM 176
H L S + ES + VH Q +K G PV++ ++ + D AR+LFDE+
Sbjct: 19 HPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEI 78
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+ N+ W MI GY+R+ + SL+ M R V
Sbjct: 79 PEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGV------------------------ 114
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+P++ T L+ G+ +HG+V ++GL + F+ AL+ MY
Sbjct: 115 ----------KPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYL 164
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
CG L AR FD K + +WN +I+++ G+ E S +F M +D + P VT
Sbjct: 165 LCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVM---EDKQVLPTTVT 221
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+ +L+AC+ + G+ + K ++E + ++D+ G + AL + + M
Sbjct: 222 LVLVLSACSKLKDLRTGKKVHSYV-KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM 280
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
D + W ++++G G D A K+ E D
Sbjct: 281 N-NRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKD 315
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 189/526 (35%), Positives = 308/526 (58%), Gaps = 17/526 (3%)
Query: 8 LNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNL---TY 64
+ + L +V+ ILERC+ +N K++ + + Q+++ KL+R T L ++ +Y
Sbjct: 3 VRRVLEWEVVRILERCSSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVT-ALPHVPLHSY 61
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
R +F L TPN + +TA+I AYA + S A S Y M R+ + P F + + +C
Sbjct: 62 PRLLFSQLHTPNPFAWTALIRAYALR-GPLSQALSFYSSM-RKRRVSPISFTFSALFSAC 119
Query: 125 PDVLESRGTKMVHTQ-IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
V S +H Q ++ GF V A+++ Y + G+ + AR +FDEM +R+V+S
Sbjct: 120 AAVRHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGS-LRCARMVFDEMPERDVIS 178
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
WT +I YTR+GD++ A LFD +P +D+ W +++ G QN + DA+ FRR+ E
Sbjct: 179 WTGLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDE-- 236
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL--DSFISNALIDMYGKCGSL 301
+ ++VTLV +SA G + I +G + + + +ALIDMY KCG++
Sbjct: 237 -GVEIDEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNV 295
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+EA F ++ + S++SMI FA+HG++ +I +F +M+ + ++P+ VTF+ +L
Sbjct: 296 EEAYDVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDML---ETGVKPNHVTFVGVL 352
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
AC+H GLV+QG+ F M K Y + P E Y C+ DLL RAG E+AL++V+ M +E D
Sbjct: 353 TACSHAGLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESD 412
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
VWG+LL ++G D AE A K+L E++P+N G ++L+N Y G+WD+V KVRK+
Sbjct: 413 GAVWGALLGASHVHGNPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKL 472
Query: 482 LKDRNAYKTPGCSWIEV-DKQVHQFHSLDKTHPRTEEIYDALESMV 526
L+++N K PG SW+E + +H+F + D +HP+ EI L ++
Sbjct: 473 LREKNLKKNPGWSWVEAKNGMIHKFVAGDVSHPKINEIKKELNDLL 518
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 181/465 (38%), Positives = 278/465 (59%), Gaps = 19/465 (4%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
+TYAR +FD + PN L+ +M YA ++ ++ +M R I ++L
Sbjct: 1 MTYARQLFDQIPDPNIALWNSMFRGYAQSESYRE----IFCEMFERNVVAWTSMINGYIL 56
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+ D++ +R ++ E+ V+ +V+ Y G D+ ARKLF EM +R+V
Sbjct: 57 SA--DLVSAR-------RLFDLAPERDVVLWNIMVSGYIEGG-DMVEARKLFHEMPNRDV 106
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
+ W ++ GY G+++ LF+ MP+R++ +WN++I G NGLF + + F+RM E
Sbjct: 107 MFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSE 166
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
++ PN TLV LSA G L LGK +H Y +GL + ++ NAL+DMY KCG +
Sbjct: 167 --SDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGII 224
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+ A F K L SWN++I A+H + +++ +F +M ++ +PDG+TFI +L
Sbjct: 225 ENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQM---KNAGQKPDGITFIGIL 281
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
ACTH GLVE G AYF+ M Y I PQIEHYGC+VD+L RAGR E+A+ V+ M +E D
Sbjct: 282 CACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEAD 341
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
V+W LL C+IY + AE A+++LIE++P N +ML+NIYG+ G+W++V +++
Sbjct: 342 GVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVA 401
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
++D K PGCS IEV+ V +F+SLD+ HP+ EEIY L +V
Sbjct: 402 MRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLV 446
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 296/518 (57%), Gaps = 14/518 (2%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN--LTYARFIF 69
L L+ LE C ++HLK + + L ++ T F F ++ ++ L YA +F
Sbjct: 14 LKNPKLSFLESCTTLSHLKIIHAHLI---RAHTIFDVFAASCLISISINKNLLDYAAQVF 70
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
+ PN ++Y + I + S +F Y R G P+ YP ++K+C
Sbjct: 71 YQIQNPNLFIYNSFIRGF-SGSKDPDKSFHFYVQSKRNGLV-PDNLTYPFLVKACTQKGS 128
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
H QI++ GF+ V+ +LV YS G DI A +F +S +VVSWT+M++
Sbjct: 129 LDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLG-DIKSASYVFRRISCLDVVSWTSMVA 187
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GY + GD+ +A LFD MP++++ W+ +I+G +N F AI + + S+ + N
Sbjct: 188 GYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQ---SEGVHAN 244
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+ +V +++ H G L+LG+ H Y+ RN + ++ + AL+DMY +CGS+ +A FD
Sbjct: 245 ETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFD 304
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
+ + SW ++I FA+HG +E ++ F M + + P +TF ++L+AC+HGGL
Sbjct: 305 QLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKA---GLTPREITFTAVLSACSHGGL 361
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
VE+G F+ M + YRIEP++EHYGC+VDLLGRAG+ EA + V M ++P+ +WG+LL
Sbjct: 362 VERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALL 421
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
C+I+ ++ AE A K LIE+ P + GY ++L+NIY KW+ V +R+M+K+R K
Sbjct: 422 GACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVK 481
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
PG + E+D +VH+F DKTHP ++I E ++
Sbjct: 482 PPGYTLFEMDGKVHKFTIGDKTHPEIQQIERMWEEILG 519
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 177/502 (35%), Positives = 301/502 (59%), Gaps = 13/502 (2%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYA 88
LK++ + + S ++F K+V C YA +F + PN +LY AMI AY
Sbjct: 4 LKKIHAHVVKFSLSXSSFLVTKMVDMCNHH-GETEYANLLFKRVADPNAFLYNAMIRAYK 62
Query: 89 SQPAHASSAFSLYRDMVRRGQPQ----PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG 144
+ A ++++ M+ + P++F +P V+K C ++ K VH K G
Sbjct: 63 HNKVYIL-AITVHKQMLGHSHGENPXFPDKFTFPFVVKXCAGLMCYNLGKQVHGHAFKFG 121
Query: 145 FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLF 204
+ V+E +LV Y + + + A ++F+EM++R+ VSW +ISG+ R+G ++ A ++F
Sbjct: 122 PKSNTVIENSLVEMYVKC-DSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAIF 180
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
+ + D+ + +W ++++G + G + A+ FFRRM M +I ++++LV L A G
Sbjct: 181 EELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMV---DIELDEISLVSVLPACAQLG 237
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
L+LGK IH Y + G D + NALI++Y K GS+ E RR F + +++ + SW++MI
Sbjct: 238 ALELGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRRLFHKMNERDVISWSTMIV 297
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
A HG++ +I +F+EM + + + P+ +TF+ LL+AC H GL+ +G YF+ M +
Sbjct: 298 GLANHGRAREAIELFQEMQKAK---VEPNIITFVGLLSACAHAGLLNEGLGYFESMERDD 354
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
IEP +EHYGCLV+LLG +GR ++ALE++K M ++PD +WG L + C+ +G + A
Sbjct: 355 NIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLSSSCRSHGNLEIVAIA 414
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
++ L+E++P++ G I L+N+Y +LGKWD V ++RK++ + KTPGCS IEVD V +
Sbjct: 415 MEHLLELEPDDTGNYITLSNLYADLGKWDGVSRMRKLMSSKYMNKTPGCSSIEVDNMVQE 474
Query: 505 FHSLDKTHPRTEEIYDALESMV 526
+ S D + P ++ IY L+ +V
Sbjct: 475 YASGDDSKPFSKAIYRVLKLLV 496
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 198/523 (37%), Positives = 305/523 (58%), Gaps = 15/523 (2%)
Query: 8 LNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARF 67
L+ LN V ++ ++ LKQ F+ G ++ N K + C+ +L YA
Sbjct: 10 LSSGLNWFVTSLKIHGTNLKTLKQSHCFMIITGLNRDNLNVAKFIEACS-NAGHLRYAYS 68
Query: 68 IFDHLTTPNTYLYTAMITAYA---SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
+F H PNTYL+ MI A + + AH S A ++YR +P+ F +P VLK
Sbjct: 69 VFTHQPFPNTYLHNTMIRALSLVDERNAH-SIAITVYRKFWAFC-AKPDTFTFPFVLKIV 126
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
V + + VH Q V GF+ V T L+ YS G +G ARK+FDEM R+V W
Sbjct: 127 VRVSDVWFGRQVHGQAVVFGFDSSVHVVTGLIQMYSSCGG-LGDARKVFDEMRVRDVNVW 185
Query: 185 TAMISGYTRVGDIKNAASLFDSMP--DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
A+++GY +VG++ A L + MP R+ +W VI+G ++G S+AI F+RM ME
Sbjct: 186 NALLAGYGKVGEMDEARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLME- 244
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
N+ P++VTL+ LSA G L+LG+ I YV G++ ++NA+IDMY K G++
Sbjct: 245 --NVDPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNIT 302
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
+A F+ +++ + +W ++I A HG ++ +F+ M++ ++P+ VTFI++L+
Sbjct: 303 KALEVFESVNERNVVTWTTIITGLATHGHGAEALVMFDRMVKA---GVKPNDVTFIAILS 359
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H G V+ G +F M Y I P IEHYGC++DLLGRAG+ EA EV+K M E +
Sbjct: 360 ACSHVGWVDLGNRFFNSMRSKYGINPNIEHYGCMIDLLGRAGKLREAEEVIKSMPFESNA 419
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
+WGSLL ++ D E A+ +LI+++PNN G ++LAN+Y LG+WDE R +RKM+
Sbjct: 420 AIWGSLLAASNVHHDIDVGERALYQLIKLEPNNSGNYMLLANLYSNLGRWDESRMMRKMM 479
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K K G S IEV+ +V++F S D +HP+ E+I++ L+ M
Sbjct: 480 KGIGVKKLAGESSIEVENRVYKFISGDLSHPQVEKIHELLQEM 522
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 193/541 (35%), Positives = 316/541 (58%), Gaps = 28/541 (5%)
Query: 4 VTNQLNQTLNQQ-------VLAILE----RCNHINHLKQLQSFLTTLGQSQTNFYAFKLV 52
+++ L T N + L+ILE C+++ ++ S + G F A +L+
Sbjct: 9 LSSALKSTFNHKPTFKPTITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLL 68
Query: 53 RFCT-LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQ 111
+F T L Y+ IFD + N +++ M+ AY Q A A LY+ MV+
Sbjct: 69 KFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYI-QSNSAEKALLLYKLMVKN-NVG 126
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
P+ + YP V+++C L G K +H ++K GF+ V+ L+N Y+ GN + ARK
Sbjct: 127 PDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGN-MRDARK 185
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGD---IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
LFDE + VSW ++++GY + GD + A LF+ M ++D+ +W+++I+G QNG++
Sbjct: 186 LFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMY 245
Query: 229 SDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS 288
+A+ F M ++ +R ++V +V LSA H +++ GK+IHG V R G++ +
Sbjct: 246 EEALVMFIEMN---ANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQ 302
Query: 289 NALI----DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
NALI DMY KCG ++ A F+ +K ++SWN++I A++G E S+ +F EM
Sbjct: 303 NALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEM-- 360
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
+++ + P+ +TF+ +L AC H GLV++GR +F M + + IEP ++HYGC+VDLLGRAG
Sbjct: 361 -KNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAG 419
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLAN 464
EA ++++ M + PD WG+LL CK +G T+ E +KLIE+ P++ G+ ++L+N
Sbjct: 420 LLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSN 479
Query: 465 IYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALES 524
I+ G W++V +VR M+K + KTPGCS IE + VH+F + DKTHP ++ L
Sbjct: 480 IFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNE 539
Query: 525 M 525
M
Sbjct: 540 M 540
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 188/511 (36%), Positives = 290/511 (56%), Gaps = 14/511 (2%)
Query: 23 CNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTA 82
C+ I LKQ+ + + G SQ NF KL+ F + NL A +F+ + P+T ++
Sbjct: 44 CDTIKKLKQIHTQIIVNGFSQKNFLLVKLLSF-YITSGNLLNAHKVFERIENPSTTVWNQ 102
Query: 83 MITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVK 142
MI + SQ LY MV + +PN+F Y ++ C R + VH ++V
Sbjct: 103 MIRGH-SQSETPHKLVELYNRMVE-AEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVVA 160
Query: 143 SGFEQYPVVETALVNSYSRSGNDIGI--ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
+G+ V T+LVN Y+ +G G+ AR++FDE+ DRN+VSW ++++GY R GD+ A
Sbjct: 161 NGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGA 220
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
+FD MP+R+V +W ++IAGC Q G A+ F M ++ +QV LV ALSA
Sbjct: 221 RRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMR---RAGVKLDQVALVAALSAC 277
Query: 261 GHTGMLQLGKVIHGYV----YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
G L+LG IH Y+ + L ++N+LI MY CG + +A + F ++
Sbjct: 278 AELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRST 337
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
SW SMI FA G +E ++ VF+ M R RPDG+TFI +L AC+H G V+QGR +
Sbjct: 338 ISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHF 397
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
F+ M K + I P+IEHYGC+VDLL RAG +EA + + M ++P++ VWG+LL GC+I+
Sbjct: 398 FECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPNDAVWGALLGGCRIHK 457
Query: 437 RTDFAEFAVKKLI-EIDPNN-GGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+ A +KL+ E+ P+ GY ++L+N+Y +W +V VR+ + + K G S
Sbjct: 458 NAELASHVAQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRS 517
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
W++++ VH F + D TH +Y+ L +
Sbjct: 518 WVQINGVVHDFVAGDWTHKHASSVYEMLSKI 548
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 197/542 (36%), Positives = 299/542 (55%), Gaps = 58/542 (10%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARF--------IFDHLTTPNT 77
++HLKQ + + G Q ++ A LV+ +N++ R+ +FD + PN
Sbjct: 48 LHHLKQAHALILRTGHLQDSYIAGSLVK----SYANVSTNRYLSFESSLRVFDFVRKPNV 103
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+L+ MI + A LY +MV +PN++ YP VLK+C D VH
Sbjct: 104 FLWNCMIKV-CIENNEPFKAILLYYEMV-VAHSRPNKYTYPAVLKACSDSGVVAEGVQVH 161
Query: 138 TQIVKSGF--------------------------------EQYPVVETALVNSYSRSGND 165
+VK G E V A+++ Y R G +
Sbjct: 162 AHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFG-E 220
Query: 166 IGIARKLFDEMSDRNVVS-WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQ 224
+ AR+LF+ M DR+++S W AMISG++R G ++ A FD M +RD +W+++I G Q
Sbjct: 221 VEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQ 280
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
G F +A+ F +M E IRP + L LSA + G L G+ IH Y RN + LD
Sbjct: 281 EGCFMEALEIFHQMQKE---KIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLD 337
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
+ +L+DMY KCG + A F++ S K ++SWN+MI A+HG++E++I +F +M
Sbjct: 338 GVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM-- 395
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
+I P+ +TF+ +LNAC HGGLV++G F M K Y +EPQIEHYGC+VDLLGRAG
Sbjct: 396 ----DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAG 451
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLAN 464
EA +VV + EP VWG+LL C+ +G + E K L+E++P N G +L+N
Sbjct: 452 LLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSN 511
Query: 465 IYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDK-QVHQFHSLDKTHPRTEEIYDALE 523
IY + G+W+EV +VRK++K+R TPG S I++ + +VH+F D +HP+ ++IY L+
Sbjct: 512 IYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLD 571
Query: 524 SM 525
+
Sbjct: 572 KV 573
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 195/542 (35%), Positives = 296/542 (54%), Gaps = 58/542 (10%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARF--------IFDHLTTPNT 77
++HLKQ + + G Q ++ A LV+ +N++ R+ +FD + PN
Sbjct: 47 LHHLKQAHALILRTGHLQDSYIAGSLVK----SYANVSTNRYLSFESSLRVFDFVRKPNV 102
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+L+ MI + Y MV +PN++ YP VLK+C D VH
Sbjct: 103 FLWNCMIKVCIENNEPFKAILLYYEMMV--AHFRPNKYTYPAVLKACSDAGVVAEGVQVH 160
Query: 138 TQIVKSGF--------------------------------EQYPVVETALVNSYSRSGND 165
+VK G E V A+++ Y R G +
Sbjct: 161 AHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFG-E 219
Query: 166 IGIARKLFDEMSDRNVVS-WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQ 224
+ AR+LF+ M DR+++S W AMISG++R G ++ A FD M +RD +W+++I G Q
Sbjct: 220 VEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQ 279
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
G F +A+ F +M E IRP + L LSA + G L G+ IH Y RN + LD
Sbjct: 280 EGCFMEALEIFHQMQKE---KIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLD 336
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
+ +L+DMY KCG + A F++ S K ++SWN+MI A+HG++E++I +F +M
Sbjct: 337 GVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM-- 394
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
+I P+ +TF+ +LNAC HGGLV++G F M K Y +EPQIEHYGC+VDLLGRAG
Sbjct: 395 ----DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAG 450
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLAN 464
EA +VV + EP VWG+LL C+ +G + E K L+E++P N G +L+N
Sbjct: 451 LLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSN 510
Query: 465 IYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDK-QVHQFHSLDKTHPRTEEIYDALE 523
IY + G+W+EV +VRK++K+R TPG S I++ + +VH+F D +HP+ ++IY L+
Sbjct: 511 IYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLD 570
Query: 524 SM 525
+
Sbjct: 571 KV 572
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 189/492 (38%), Positives = 294/492 (59%), Gaps = 10/492 (2%)
Query: 28 HLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL-SNLTYARFIFDHLTTPNTYLYTAMITA 86
H+KQ+QS LT G F A +++ FC + ++++A +F L ++++ M+ A
Sbjct: 3 HIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTMLRA 62
Query: 87 YASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFE 146
+ + A+ SLY+ M+ G PN + + +L++C + + ++H Q V+ G+E
Sbjct: 63 FTDKKEPAT-VLSLYKYMLSTG-FLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWE 120
Query: 147 QYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDS 206
Y V+ L++ Y+ S N + AR+LFD +R+VV+WTA+I+GY + G + A LFD
Sbjct: 121 AYDFVQNGLLHLYA-SCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDE 179
Query: 207 MPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGML 266
MP+++ +W+++I G Q GLF +A+ F M + RPN +V AL+A G L
Sbjct: 180 MPEKNAVSWSAMITGYAQIGLFREALELFNDMQIA---GFRPNHGAIVGALTACAFLGAL 236
Query: 267 QLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSF 326
G+ IH YV RN + LD + ALIDMY KCG ++ A R FD + + ++ S+I+
Sbjct: 237 DQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGL 296
Query: 327 ALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRI 386
A HG S +I +F M Q+ + P+ VTFI LL+AC+ GLVE+G FK MT Y I
Sbjct: 297 ANHGHSATAIEMFTRM---QNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGI 353
Query: 387 EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
EP ++HYGCLVDLLGRAG E+A VV+ M +EPD V G+LLN C+++G + + V+
Sbjct: 354 EPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVE 413
Query: 447 KLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFH 506
L E ++GG ++L+N+Y +W++V KVRK ++++ K PGCS IEVD V +F
Sbjct: 414 CLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLIEVDGAVFEFV 473
Query: 507 SLDKTHPRTEEI 518
+ D +H +EI
Sbjct: 474 AGDMSHVFMDEI 485
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 191/512 (37%), Positives = 290/512 (56%), Gaps = 23/512 (4%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
+ +++L+ C H N + + + + Q F F+L+R C+ L+++ YA IF H
Sbjct: 33 RHFISLLQNCKHNNQIPPIYAKIIRNHHHQDPFVVFELLRVCS-NLNSIGYASKIFSHTQ 91
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
PN YLYTA+I + + LY M+ P+ + VLK+C L +
Sbjct: 92 NPNVYLYTALIDGLVLS-CYYTDGIHLYYQMIN-SSLVPDSYAVTSVLKACGCHLALKEG 149
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+ VH+Q++K G + L+ Y + G AR++FDEM +R+VV+ T MI+ Y
Sbjct: 150 REVHSQVLKLGLSSNRSIRIKLIELYGKCG-AFEDARRVFDEMPERDVVASTVMINYY-- 206
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
FD +D W ++I G +NG + A+ FR M E ++ PN+VT+
Sbjct: 207 ----------FDH-GIKDTVCWTAMIDGLVRNGESNRALEVFRNMQRE---DVMPNEVTI 252
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
VC LSA G LQLG+ + Y+ ++ ++L+ F+ ALI+MY +CG + EA+R F++ +
Sbjct: 253 VCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKE 312
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K + ++NSMI FALHG+S ++ +F +++ P VTF+ +LNAC+HGGL E G
Sbjct: 313 KNVITYNSMIMGFALHGKSVEAVELFRGLIK---QGFTPSSVTFVGVLNACSHGGLAELG 369
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
F M K Y IEPQIEHYGC+VDLLGR GR EEA ++ MK+ PD V+ G+LL+ CK
Sbjct: 370 FEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACK 429
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
I+G + AE K L+ + G I+L+N Y GKW E +VR +++ K PGC
Sbjct: 430 IHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGC 489
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
S IEV+ ++H+F D HP+ E+IY LE +
Sbjct: 490 SSIEVNNEIHEFLLGDLRHPQKEKIYKKLEEL 521
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 181/498 (36%), Positives = 295/498 (59%), Gaps = 14/498 (2%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAY-- 87
+QL + G F LV+ L L AR +FD + + +I+AY
Sbjct: 159 RQLHGHVLKHGLQYNVFVHTALVQMYLL-CGQLDTARGVFDVCPKADVITWNMIISAYNK 217
Query: 88 ASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQ 147
+ + F + D Q P VL +C + + R K VH+ + E
Sbjct: 218 VGKFEESRRLFLVMED----KQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVES 273
Query: 148 YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM 207
V+E A+++ Y+ G ++ A +F M++R+++SWT ++SG+T +G+I A + FD M
Sbjct: 274 NLVLENAMIDMYADCG-EMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKM 332
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
P++D +W ++I G ++ F +A+ FR M + N++P++ T+V L+A H G L+
Sbjct: 333 PEKDYVSWTAMIDGYIRSNRFKEALELFRNMQ---ATNVKPDEFTMVSVLTACAHLGALE 389
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFA 327
LG+ I Y+ RN + D F+ NALIDMY KCG + +A F S++ +W +MI A
Sbjct: 390 LGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLA 449
Query: 328 LHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIE 387
++G E ++ +F M++ +I PD +T+I +L+ACTH GLV++GR YF MT + IE
Sbjct: 450 VNGHGEKALDMFSNMLKA---SILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIE 506
Query: 388 PQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKK 447
P I HYGCLVDLL RAGR +EA EV++ M I+ + +VWG+LL GC++Y +D AE VK+
Sbjct: 507 PNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQ 566
Query: 448 LIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHS 507
++E++P+NG ++L NIY +W+++R++R+M+ D+ K PGCS IE++ +VH+F +
Sbjct: 567 ILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVA 626
Query: 508 LDKTHPRTEEIYDALESM 525
D++HP+T+ I L+ M
Sbjct: 627 GDRSHPQTKNIDAKLDKM 644
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 199/458 (43%), Gaps = 74/458 (16%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFC-TLKLSNLTYARFIFDHLTT 74
++++LE C ++ L+Q+ G + +++ FC T + + YAR +FD +
Sbjct: 42 LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 101
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
PN +++ MI Y S+ SLY +M+RRG +P+++ +P + K + +
Sbjct: 102 PNLFIWNTMIRGY-SRLDFPQLGVSLYLEMLRRGV-KPDRYTFPFLFKGFTRDIALEYGR 159
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H ++K G + V TALV Y G + AR +FD +V++W +IS Y +V
Sbjct: 160 QLHGHVLKHGLQYNVFVHTALVQMYLLCGQ-LDTARGVFDVCPKADVITWNMIISAYNKV 218
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + + LF M D+ V P VTLV
Sbjct: 219 GKFEESRRLFLVMEDKQV----------------------------------LPTTVTLV 244
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE----------- 303
LSA L+ GK +H YV ++ + + NA+IDMY CG +
Sbjct: 245 LVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNR 304
Query: 304 --------------------ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
AR FD+ +K SW +MI+ + + + ++ +F M
Sbjct: 305 DIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNM- 363
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
Q N++PD T +S+L AC H G +E G + + +I+ + L+D+ +
Sbjct: 364 --QATNVKPDEFTMVSVLTACAHLGALELGE-WIRTYIDRNKIKNDLFVRNALIDMYFKC 420
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
G ++A + + M + D+ W +++ G + G + A
Sbjct: 421 GDVDKAESIFREMS-QRDKFTWTAMIVGLAVNGHGEKA 457
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 145/336 (43%), Gaps = 41/336 (12%)
Query: 119 HVLKSCPDVLESRGT-KMVHTQIVKSGFEQYPVVETALVN-SYSRSGNDIGIARKLFDEM 176
H L S + ES + VH Q +K G PV++ ++ + D AR+LFDE+
Sbjct: 40 HPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEI 99
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+ N+ W MI GY+R+ + SL+ M R V
Sbjct: 100 PEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGV------------------------ 135
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+P++ T L+ G+ +HG+V ++GL + F+ AL+ MY
Sbjct: 136 ----------KPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYL 185
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
CG L AR FD K + +WN +I+++ G+ E S +F M +D + P VT
Sbjct: 186 LCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVM---EDKQVLPTTVT 242
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+ +L+AC+ + G+ + K ++E + ++D+ G + AL + + M
Sbjct: 243 LVLVLSACSKLKDLRTGKKVHSYV-KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM 301
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
D + W ++++G G D A K+ E D
Sbjct: 302 N-NRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKD 336
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/522 (37%), Positives = 304/522 (58%), Gaps = 13/522 (2%)
Query: 8 LNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARF 67
L+ LN V ++ N++ LKQ ++ G ++ N K + C+ +L YA
Sbjct: 10 LSSGLNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACS-NAGHLRYAYS 68
Query: 68 IFDHLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
+F H PNTYL+ MI A + +P S A ++YR + +P+ F +P VLK
Sbjct: 69 VFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALC-AKPDTFTFPFVLKIAV 127
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
V + + +H Q+V GF+ V T L+ Y G +G ARK+FDEM ++V W
Sbjct: 128 RVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGG-LGDARKMFDEMLVKDVNVWN 186
Query: 186 AMISGYTRVGDIKNAASLFDSMP--DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
A+++GY +VG++ A SL + MP R+ +W VI+G ++G S+AI F+RM ME
Sbjct: 187 ALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLME-- 244
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
N+ P++VTL+ LSA G L+LG+ I YV G++ ++NA+IDMY K G++ +
Sbjct: 245 -NVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITK 303
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A F+ +++ + +W ++I A HG ++ +F M++ +RP+ VTFI++L+A
Sbjct: 304 ALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKA---GVRPNDVTFIAILSA 360
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C+H G V+ G+ F M Y I P IEHYGC++DLLGRAG+ EA EV+K M + +
Sbjct: 361 CSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAA 420
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+WGSLL ++ + E A+ +LI+++PNN G ++LAN+Y LG+WDE R +R M+K
Sbjct: 421 IWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMK 480
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K G S IEV+ +V++F S D THP+ E I++ L+ M
Sbjct: 481 GIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEM 522
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 175/501 (34%), Positives = 298/501 (59%), Gaps = 17/501 (3%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMIT 85
+NH + F + L + + F L R L AR +FD + M++
Sbjct: 130 LNHAVK-HGFDSNLFVQKAFIHMFSLCRLVDL-------ARKVFDMGDAWEVVTWNIMLS 181
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
Y S L+ +M +RG PN +L +C + + G K ++ I
Sbjct: 182 GYNRVKQFKKSKM-LFIEMEKRG-VSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIV 239
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
E+ ++E L++ ++ G ++ A+ +FD M +R+V+SWT++++G+ +G I A FD
Sbjct: 240 ERNLILENVLIDMFAACG-EMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFD 298
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
+P+RD +W ++I G + F +A++ FR M M N++P++ T+V L+A H G
Sbjct: 299 QIPERDYVSWTAMIDGYLRMNRFIEALALFREMQM---SNVKPDEFTMVSILTACAHLGA 355
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L+LG+ + Y+ +N + D+F+ NALIDMY KCG++ +A++ F K +W +MI
Sbjct: 356 LELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVG 415
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
A++G E ++ +F M+ + +I PD +T+I +L ACTH G+VE+G+++F MT +
Sbjct: 416 LAINGHGEEALAMFSNMI---EASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHG 472
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
I+P + HYGC+VDLLGRAGR EEA EV+ M ++P+ +VWGSLL C+++ AE A
Sbjct: 473 IKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAA 532
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
K+++E++P NG ++L NIY +W+ +R+VRK++ +R KTPGCS +E++ V++F
Sbjct: 533 KQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEF 592
Query: 506 HSLDKTHPRTEEIYDALESMV 526
+ D++HP+++EIY LE+M+
Sbjct: 593 VAGDQSHPQSKEIYAKLENMM 613
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 137/539 (25%), Positives = 227/539 (42%), Gaps = 109/539 (20%)
Query: 8 LNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYAR 66
++ + +++LE+C + LKQ+ S +G S + +++ FC S + YAR
Sbjct: 2 ISHCFGESPISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYAR 61
Query: 67 FIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPD 126
+FD + P +++ MI Y S+ H + S+Y M+ +P++F +P +LK
Sbjct: 62 QVFDAIPQPTLFIWNTMIKGY-SRINHPQNGVSMYLLML-ASNIKPDRFTFPFLLKGFTR 119
Query: 127 VLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
+ + K++ VK GF+ V+ A ++ +S + +ARK+FD VV+W
Sbjct: 120 NMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLC-RLVDLARKVFDMGDAWEVVTWNI 178
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
M+SGY RV K + LF M R V
Sbjct: 179 MLSGYNRVKQFKKSKMLFIEMEKRGVS--------------------------------- 205
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
PN VTLV LSA L+ GK I+ Y+ ++ + + N LIDM+ CG + EA+
Sbjct: 206 -PNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQS 264
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSE-------------------------------NS 335
FD + + SW S++ FA GQ + +
Sbjct: 265 VFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEA 324
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR--------------------- 374
+ +F EM Q N++PD T +S+L AC H G +E G
Sbjct: 325 LALFREM---QMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNAL 381
Query: 375 --AYFKL--MTKTYRIEPQIEH-----YGCLVDLLGRAGRFEEALEVVKGM---KIEPDE 422
YFK + K ++ ++ H + ++ L G EEAL + M I PDE
Sbjct: 382 IDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDE 441
Query: 423 VVWGSLLNGCKIYGRTDFAE-FAVKKLIE--IDPNNGGYGIMLANIYGELGKWDEVRKV 478
+ + +L C G + + F + ++ I PN YG M+ ++ G G+ +E +V
Sbjct: 442 ITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMV-DLLGRAGRLEEAHEV 499
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 180/512 (35%), Positives = 304/512 (59%), Gaps = 10/512 (1%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L L R + ++ LG F LVR + AR +FD +
Sbjct: 128 LLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYA-ACGRIAEARLMFDKMFHR 186
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ ++ MI Y Q + A L+ +M + +P++ + VL +C KM
Sbjct: 187 DVVTWSIMIDGYC-QSGLFNDALLLFEEM-KNYNVEPDEMMLSTVLSACGRAGNLSYGKM 244
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+H I+++ P +++ALV Y+ G+ + +A LF++M+ +N+V+ TAM++GY+++G
Sbjct: 245 IHDFIMENNIVVDPHLQSALVTMYASCGS-MDLALNLFEKMTPKNLVASTAMVTGYSKLG 303
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
I+NA S+F+ M +D+ W+++I+G ++ +A++ F M S I+P+QVT++
Sbjct: 304 QIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQ---SLGIKPDQVTMLS 360
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
++A H G L K IH +V +NG I+NALI+MY KCGSL+ ARR FD+ +K
Sbjct: 361 VITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKN 420
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
+ SW MI++FA+HG + +++ F +M +D NI P+G+TF+ +L AC+H GLVE+GR
Sbjct: 421 VISWTCMISAFAMHGDAGSALRFFHQM---EDENIEPNGITFVGVLYACSHAGLVEEGRK 477
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
F M + I P+ HYGC+VDL GRA EALE+V+ M + P+ ++WGSL+ C+++
Sbjct: 478 IFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVH 537
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
G + EFA K+L+E+DP++ G + L+NIY + +W++V +VRK++K + K GCS
Sbjct: 538 GEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSR 597
Query: 496 IEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
E++ ++H+F D++H +EIY+ L +V+
Sbjct: 598 FELNNEIHEFLVADRSHKHADEIYEKLYEVVS 629
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 216/498 (43%), Gaps = 74/498 (14%)
Query: 13 NQQVLAILERCNHINHLKQLQS-FLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
+ + + L + HLKQ+ + L + T+ ++ C L S+L YA +F+
Sbjct: 23 HHTLFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALS-SSLDYALSVFNL 81
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ P T+L + S+ +Y M +G ++F +P +LK+ V
Sbjct: 82 IPKPETHLCNRFLREL-SRSEEPEKTLLVYERMRTQGLA-VDRFSFPPLLKALSRVKSLV 139
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
+H K GF+ P V+T LV Y+ G I AR +FD+M R+VV+W+ MI GY
Sbjct: 140 EGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGR-IAEARLMFDKMFHRDVVTWSIMIDGY 198
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
+ G LF+DA+ F M + N+ P+++
Sbjct: 199 CQSG-------------------------------LFNDALLLFEEMK---NYNVEPDEM 224
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
L LSA G G L GK+IH ++ N + +D + +AL+ MY CGS+ A F++
Sbjct: 225 MLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKM 284
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMR----C---------------------- 345
+ K L + +M+ ++ GQ EN+ VF +M++ C
Sbjct: 285 TPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFN 344
Query: 346 --QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
Q I+PD VT +S++ AC H G ++Q + + L + L+++ +
Sbjct: 345 EMQSLGIKPDQVTMLSVITACAHLGALDQAK-WIHLFVDKNGFGGALPINNALIEMYAKC 403
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGY-GI 460
G E A + M + + W +++ ++G A ++ + I+PN + G+
Sbjct: 404 GSLERARRIFDKMP-RKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGV 462
Query: 461 MLANIYGELGKWDEVRKV 478
+ A + G +E RK+
Sbjct: 463 LYACSHA--GLVEEGRKI 478
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 194/576 (33%), Positives = 308/576 (53%), Gaps = 65/576 (11%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFI 68
N N Q+L++ C + HLKQ+ + + T S A + + + L YA+ I
Sbjct: 92 NPPSNPQILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLAYAKTI 151
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
F HL P LY ++I A +S A LY M++ G +P+ YP V+K+C +
Sbjct: 152 FHHLQNPPPSLYNSLIRALSSSKT-PLEALPLYHTMLQSGL-KPDHMTYPFVIKACNESS 209
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ +VHT +VKSGFE + ++L++ Y+ +G D+G A++LF+ S R+VVSW AMI
Sbjct: 210 VTWFGLLVHTHVVKSGFECDSYIVSSLIHLYA-NGKDLGAAKQLFNLCSARDVVSWNAMI 268
Query: 189 SGYTR-------------------------------VGDIKNAASLFDSMPDRDVPAWNS 217
GY + VG I A LFD MP+R++ +WNS
Sbjct: 269 DGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNS 328
Query: 218 VIAGCTQNGLFSDAISFFRRM-----------------------GMEVSDNIR-----PN 249
++AG + G DA F M + + D +R P
Sbjct: 329 MLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPT 388
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+ T+V LSA H G L G +H Y+ N ++++S + AL+DMY KCG + A + F+
Sbjct: 389 EATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFN 448
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
K + +WN++I A+HG + + +F+EM ++ + P+ +TF+++L+AC+H G+
Sbjct: 449 AMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEM---KEAGVEPNDITFVAILSACSHAGM 505
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
V++G+ M+ +Y IEP++EHYGC++DLL RAG EEA+E++ M +EP+ G+LL
Sbjct: 506 VDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALL 565
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
GC+I+G + E K+LI + P + G I+L+NIY KWD+ RKVR ++K K
Sbjct: 566 GGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISK 625
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PG S IE+ VH+F + D +HP + +IY+ L +
Sbjct: 626 VPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEI 661
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/387 (19%), Positives = 154/387 (39%), Gaps = 50/387 (12%)
Query: 100 LYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSY 159
L M R P N P +L R K VH QI+ + + A +++
Sbjct: 79 LQSSMSRTPNPLTNPPSNPQILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSAL 138
Query: 160 SRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVI 219
S + A+ +F + + SL+ NS+I
Sbjct: 139 SPFPTFLAYAKTIFHHLQNP--------------------PPSLY-----------NSLI 167
Query: 220 AGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN 279
+ + +A+ + M + ++P+ +T + A + + G ++H +V ++
Sbjct: 168 RALSSSKTPLEALPLYHTM---LQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKS 224
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
G + DS+I ++LI +Y L A++ F+ S + + SWN+MI+ + H + ++ VF
Sbjct: 225 GFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVF 284
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
+ M+ C+ D +++ +++N G +++ + F M E + + ++
Sbjct: 285 DRMV-CR------DVISWNTMINGYAIVGKIDEAKRLFDEMP-----ERNLVSWNSMLAG 332
Query: 400 LGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD--FAEFAVKKLIEIDPNNGG 457
+ G E+A + M D V W S+L G+ + A F + + + P
Sbjct: 333 FVKCGNVEDAFGLFSEMPCR-DVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEAT 391
Query: 458 YGIMLANIYGELGKWDEVRKVRKMLKD 484
+ L + LG D+ + + D
Sbjct: 392 V-VSLLSACAHLGALDKGLHLHTYIND 417
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 190/542 (35%), Positives = 299/542 (55%), Gaps = 41/542 (7%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARFIFDHLTTPN 76
++L C + +LKQ+ +++ G A KL+ + + + L YAR +F H P+
Sbjct: 10 SLLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPD 69
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
+++ +I A +S + + +M RR + F + +LK+ +
Sbjct: 70 VFMHNTLIRGLAESDTPQNSLIT-FVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQL 128
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGD 196
H Q + G + + V T LV+ YS G + A+K+F+EM + NVV+W A+++ R GD
Sbjct: 129 HCQAIVHGLDTHLFVGTTLVSMYSECGF-VAFAKKVFEEMFEPNVVAWNAVVTACFRCGD 187
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCTQ-------------------------------N 225
+K A +F+ MP R++ +WN ++AG T+ N
Sbjct: 188 VKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHN 247
Query: 226 GLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
G F +A FFR + +RPN+V+L ALSA G ++ GK++HG++ ++G
Sbjct: 248 GFFYEAFGFFRELQ---QVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMV 304
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENSICVFEEMMR 344
++NAL+D Y KCG++ AR F+R +KR + SW SMI A+HG E +I +F EM
Sbjct: 305 SVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEM-- 362
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
++ IRPDG+ FIS+L AC+H GL+E+G YF M Y IEP IEHYGC+VDL GRAG
Sbjct: 363 -EESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAG 421
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLAN 464
+ ++A E + M + P ++W +LL C I+G AE ++L E+DPNN G ++L+N
Sbjct: 422 QLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSN 481
Query: 465 IYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALES 524
IY GKW +V VR+ + D+ KTPG S IEVDK ++ F + + + TEE Y+ L+
Sbjct: 482 IYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKE 541
Query: 525 MV 526
++
Sbjct: 542 IM 543
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 181/476 (38%), Positives = 296/476 (62%), Gaps = 15/476 (3%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYA---SQPAHAS-SAFSLYRDMVRRGQPQPN 113
+L + T+ F H T ++L+ +I A+ +QP + S S++ M G QP+
Sbjct: 6 RLISSTHPTLHFSH-PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGV-QPD 63
Query: 114 QFIYPHVLKS--CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
+P +L+S P +L + VH QI++ G P V+T+L++ YS GN +G AR+
Sbjct: 64 FHTFPFLLQSFASPSLLHL--GRSVHAQILRFGLAIDPFVQTSLISMYSSCGN-LGFARQ 120
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
+FDE+ ++ SW ++I+ + G + A +LF MP+R+V +W+ +I G + G + +A
Sbjct: 121 VFDEIPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEA 180
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
++ FR M M +++RPN+ T+ L+A G G L+ GK H Y+ + G+ +D + AL
Sbjct: 181 LALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTAL 240
Query: 292 IDMYGKCGSLKEARRAF-DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
IDMY KCGS+++A F + K + +W++MI+ A+HG +E + +F +M+ + +
Sbjct: 241 IDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMI---NQGV 297
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
RP+ VTF+++ AC HGGLV +G+ Y + MT+ Y I P I+HYGC+VDL GRAGR +EA
Sbjct: 298 RPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAW 357
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELG 470
VVK M +EPD +VWG+LL+G +++G + E A+KKLIE++P N G ++L+N+Y + G
Sbjct: 358 NVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRG 417
Query: 471 KWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+W++VR VR +++ K PGCS IEV +H+F D +HP T +I+ LE ++
Sbjct: 418 RWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEIL 473
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 188/550 (34%), Positives = 301/550 (54%), Gaps = 45/550 (8%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARFIFD 70
+ + +++L +C+ + KQ+ + + G KL+ C + +S+ L YA +F
Sbjct: 1 MEEAWVSLLSKCSSLKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFH 60
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP--QPNQFIYPHVLKSCPDVL 128
H P+T+++ +I + + S SL+ + R QP P+ F + LK+ +
Sbjct: 61 HFPNPDTFMHNTLIRSLSLSQTPLS---SLHPFIQLRRQPTLSPDSFTFAFALKAVANSR 117
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
R +H+Q + GF+ + V T L++ Y+ G D G AR++FDEMS+ NVV+W A++
Sbjct: 118 HLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECG-DSGSARRVFDEMSEPNVVTWNAVL 176
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQ------------------------ 224
+ R GD++ A +F MP R++ +WN ++AG +
Sbjct: 177 TAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWST 236
Query: 225 -------NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVY 277
NG F +A FFR + + + IR N+V+L LSA G + GK++HG+V
Sbjct: 237 MIVGFAHNGCFDEAFGFFREL---LREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVE 293
Query: 278 RNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENSI 336
+ G ++NALID Y KCG++ AR F R + SW S+I A+HG E +I
Sbjct: 294 KAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAI 353
Query: 337 CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCL 396
+F EM ++ +RPDG+TFISLL AC+H GLVE+G F M Y IEP IEHYGC+
Sbjct: 354 QLFHEM---EESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCM 410
Query: 397 VDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNG 456
VDL GRA R ++A E + M + P+ ++W +LL C I+G + AE +L E+DP+N
Sbjct: 411 VDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNS 470
Query: 457 GYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTE 516
G ++L+N+Y GKW +V +R+ + + + KTPG S IE+DK ++ F + +K + TE
Sbjct: 471 GDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTE 530
Query: 517 EIYDALESMV 526
E ++ L ++
Sbjct: 531 EAHEKLREIM 540
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 299/534 (55%), Gaps = 25/534 (4%)
Query: 6 NQLNQTLNQQV-LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLT 63
+ L Q L + L++ + C+ ++QL +F F + +L+ + K+++L
Sbjct: 8 HSLQQYLPHNLHLSLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLG 67
Query: 64 YARFIFDHLTTPNTYLYTAMITAYA-SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
YAR IFD + + + +I Y +Q +H L+ ++V + P+ F P V+K
Sbjct: 68 YARSIFDRIQRRSLIHWNTIIKCYVENQFSH--DGIVLFHELVH--EYLPDNFTLPCVIK 123
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR--- 179
C + + K +H +K GF V+ +LVN YS+ G +I ARK+FD M D+
Sbjct: 124 GCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCG-EIDCARKVFDGMIDKDVV 182
Query: 180 --------NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
N+VSW AMI+GY + GD +A LF MP D+ WN +IAG NG F DA
Sbjct: 183 LWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDA 242
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
+ F M + RP+ TLV LSA+ +L G+ IH Y+ +NG +LD + +L
Sbjct: 243 VKMFFMM---LKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSL 299
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIR 351
I+MY KCG ++ A F KK++ W ++I +HG + +++ +F EM + ++
Sbjct: 300 IEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKT---GLK 356
Query: 352 PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALE 411
P+ + FI +LNAC H GLV+ GR YF +M Y+IEP +EHYGCLVD+L RAG EEA
Sbjct: 357 PNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKN 416
Query: 412 VVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGK 471
++ M I P++V+W SLL G + +G+ D E+A +++IE+ P G I+L+N+Y G
Sbjct: 417 TIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGM 476
Query: 472 WDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
W++V VR+M+ R K PGCS +E +H+F D +HP+T+EIY + M
Sbjct: 477 WEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEM 530
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 187/512 (36%), Positives = 295/512 (57%), Gaps = 15/512 (2%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN--LTYARFIFDHLTTPNT 77
E+C ++ L+Q S + LG S N L+ FC ++ LTYA +FD + P+
Sbjct: 29 FEKCQSMSQLRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDA 88
Query: 78 YLYTAMITAYA-SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
+LY +I + SQ +S LY M++ PN F +P +L +C + + +
Sbjct: 89 FLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSV-LPNNFTFPSLLIACRKI---QHGMQI 144
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGD 196
H + K GF + V +L++ Y + + AR++F + + VSWT++ISGY++ G
Sbjct: 145 HAHLFKFGFGAHSVCLNSLIHMYV-TFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGL 203
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
I A ++F MP ++ +WN+++A Q F +A + F RM E +N ++
Sbjct: 204 IDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAE--NNNVLDKFVATTM 261
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK--K 314
LSA G L GK IH Y+ RNG++LDS ++ A++DMY KCG L++A + F +
Sbjct: 262 LSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCR 321
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
++SWN MI A+HG E +I +F+EM R + PD +TF++LL AC H GLVE+GR
Sbjct: 322 WISSWNCMIGGLAMHGNGEAAIQLFKEMER---QRVAPDDITFLNLLTACAHSGLVEEGR 378
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
YF M + Y IEP++EH+GC+VDLLGRAG EA +++ M + PD V G+LL CK
Sbjct: 379 NYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKK 438
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+ + E +++IE++PNN G ++LAN+Y GKW++ KVRK++ DR K PG S
Sbjct: 439 HRNIELGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFS 498
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
IE+ VH+F + ++ HP+ +E++ + M+
Sbjct: 499 MIELQGTVHEFIAGERNHPQAKELHAKVYEML 530
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/458 (39%), Positives = 285/458 (62%), Gaps = 11/458 (2%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F P+ +L+TA I AS AF LY ++ Q PN+F + +LKSC
Sbjct: 84 LFHQTIDPDLFLFTAAINT-ASINGLKDQAFLLYVQLLS-SQINPNEFTFSSILKSC--- 138
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
++ K++HT ++K G P V T LV+ Y++ G D+ A+K+FD M +R++VS TAM
Sbjct: 139 -STKSGKLIHTHVLKFGLGLDPYVATGLVDIYAK-GGDVVSAQKVFDRMPERSLVSSTAM 196
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I+ Y + G+++ A +LFD M +RD+ +WN +I G +Q+G SDA+ F+++ + +
Sbjct: 197 ITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLAD--GKPK 254
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P+++T+V ALSA G L+ G+ IH +V + + L+ + ALIDMY KCGSL+EA
Sbjct: 255 PDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLV 314
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F+ +K + +WN+MI +A+HG S++++ +F+EM ++P +TFI L AC H
Sbjct: 315 FNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGIT--GLQPTDITFIGTLQACAHA 372
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GLV +G F+ M + Y I+P+IEHYGCLV LLGRAG+ + A E++K M +E D V+W S
Sbjct: 373 GLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSS 432
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
+L CK++G + + LI + +N G ++L+NIY +G ++ V KVR ++K++
Sbjct: 433 VLGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGI 492
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PG S IE+D +VH+F + D+ H +++EIY L M
Sbjct: 493 VKEPGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKM 530
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 134/278 (48%), Gaps = 42/278 (15%)
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
Y G I+++ +LF D D+ + + I + NGL A + ++ +S I PN
Sbjct: 71 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQL---LSSQINPN 127
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK------------ 297
+ T S+I + + GK+IH +V + GL LD +++ L+D+Y K
Sbjct: 128 EFT----FSSILKSCSTKSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFD 183
Query: 298 ---------------C----GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICV 338
C G+++ AR FDR ++ + SWN MI+ ++ HG +++ +
Sbjct: 184 RMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALML 243
Query: 339 FEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVD 398
F++++ D +PD +T ++ L+AC+ G +E GR + + + RI ++ L+D
Sbjct: 244 FQKLL--ADGKPKPDEITVVAALSACSQIGALETGR-WIHVFVNSSRIRLNVKVCTALID 300
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
+ + G EEA+ V D V W +++ G ++G
Sbjct: 301 MYSKCGSLEEAVLVFNDTP-RKDIVAWNAMITGYAMHG 337
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 81/220 (36%), Gaps = 43/220 (19%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL------KLSNLTYARFIF 69
V+A L C+ I L+ + + S+ V+ CT K +L A +F
Sbjct: 260 VVAALSACSQIGALETGRWIHVFVNSSRIRLN----VKVCTALIDMYSKCGSLEEAVLVF 315
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
+ + + AMIT YA ++ A L+ +M QP + L++C
Sbjct: 316 NDTPRKDIVAWNAMITGYAMH-GYSQDALRLFDEMQGITGLQPTDITFIGTLQAC----- 369
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
H +V G + + G + GI K + + ++S
Sbjct: 370 ------AHAGLVNEG-----------IQIFESMGQEYGIKPK---------IEHYGCLVS 403
Query: 190 GYTRVGDIKNAASLFDSMP-DRDVPAWNSVIAGCTQNGLF 228
R G +K A + +M + D W+SV+ C +G F
Sbjct: 404 LLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEF 443
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/482 (36%), Positives = 285/482 (59%), Gaps = 9/482 (1%)
Query: 46 FYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMV 105
F + L+ F + L +L A +F + + + +MI+ + Q A L++ M
Sbjct: 167 FISNSLIHFYS-SLGDLDSAYLVFSKIVEKDIVSWNSMISGFV-QGGSPEEALQLFKRM- 223
Query: 106 RRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGND 165
+ +PN+ VL +C ++ + I ++G + ++ A+++ Y + G+
Sbjct: 224 KMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGS- 282
Query: 166 IGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQN 225
+ AR+LFD+M ++++VSWT MI GY +VGD A +FD MP D+ AWN++I+ QN
Sbjct: 283 LEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQN 342
Query: 226 GLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
G +A++ FR + +++ N +PN+VTL L+A G + LG IH Y+ + G+ L+
Sbjct: 343 GKPKEALAIFREL--QLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNF 400
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
I+ +LIDMY KCG L++A F ++ + W++MI A+HG +I +F +M
Sbjct: 401 HITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKM--- 457
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
Q+ ++P+ VTF +LL AC+H GLV++GR +F M Y + P +HY C+VD+LGRAG
Sbjct: 458 QETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGC 517
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANI 465
EEA+E+++ M I P VWG+LL C+IYG + AE A +L+E D NN G ++L+NI
Sbjct: 518 LEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNI 577
Query: 466 YGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
Y + GKWD V ++R+ +K K PGCS IEV+ +H+F D +HP + EIY L+ +
Sbjct: 578 YAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEI 637
Query: 526 VA 527
VA
Sbjct: 638 VA 639
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 229/486 (47%), Gaps = 75/486 (15%)
Query: 4 VTNQLNQTLNQQVLAIL-ERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSN 61
+T Q N + IL ++C + HLKQL + + G A KL C L S+
Sbjct: 20 LTANNEQKSNPSTVPILIDKCANKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSS 79
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L YA +FD + PN Y + +I A+AS P ++ M+ Q PN + +P V+
Sbjct: 80 LDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLL-VFIQMLHESQRFPNSYTFPFVI 138
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
K+ +V + +H ++K+ F + +L++ YS G D+ A +F ++ ++++
Sbjct: 139 KAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLG-DLDSAYLVFSKIVEKDI 197
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
VSW +MISG+ Q G +A+ F+RM ME
Sbjct: 198 VSWNSMISGF-------------------------------VQGGSPEEALQLFKRMKME 226
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
N RPN+VT+V LSA L+ G+ Y+ RNG+D++ +SNA++DMY KCGSL
Sbjct: 227 ---NARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSL 283
Query: 302 KEARRAFDRNSKK-------------------------------RLTSWNSMINSFALHG 330
++ARR FD+ +K +T+WN++I+S+ +G
Sbjct: 284 EDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNG 343
Query: 331 QSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQI 390
+ + ++ +F E+ + N +P+ VT S L AC G ++ G + + K I+
Sbjct: 344 KPKEALAIFRELQ--LNKNTKPNEVTLASTLAACAQLGAMDLG-GWIHVYIKKQGIKLNF 400
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI--YGRTDFAEFAVKKL 448
L+D+ + G E+ALEV ++ D VW +++ G + +GR F+ +
Sbjct: 401 HITTSLIDMYSKCGHLEKALEVFYSVE-RRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQE 459
Query: 449 IEIDPN 454
++ PN
Sbjct: 460 TKVKPN 465
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 184/511 (36%), Positives = 296/511 (57%), Gaps = 15/511 (2%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQ--SQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPN 76
+L++C + LKQ+ TLG S+ A KL+ T +L + A+ +F+H+ P+
Sbjct: 9 LLQKCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYT-QLGSPVDAQKVFNHIQNPD 67
Query: 77 TYLYTAMITAY--ASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
+T +I+ Y SQP AFS++ + G +P+ F + +C + +
Sbjct: 68 IVSWTCLISLYLHTSQPC---KAFSIFSHLFHSGL-RPDSFCVVGAVSACGHRKDLSNGR 123
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+VH + + P+V AL++ YSRSG I +A +F M ++V SWT++++G+ +
Sbjct: 124 IVHGMVFRFELGSDPIVGNALIDMYSRSGA-IEVACSVFKTMEIKDVSSWTSLLNGFIKC 182
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
DI+ A +FD MP R+ +W ++I G Q + + F+ M E D P +T+V
Sbjct: 183 NDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKD--WPTVITIV 240
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
LS G LG +HGYV + LDLD ++NAL+DMY K G+L A + F K+
Sbjct: 241 AVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKR 300
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ SW +MI+ ALHG+ +++ F +M + + P+ VT +S+L+AC+H GLV +GR
Sbjct: 301 DVFSWTTMISGLALHGKGTHALEAFSDMSK---SGVVPNEVTLLSVLSACSHAGLVVEGR 357
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
+ F+ M + + I+P+I+HYGC+VDLLGRAG EA E+++ M I+PD V+W SLL+ C +
Sbjct: 358 SLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLV 417
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+G AE A K +IE++P++ G I+L NIY +W++ K RK ++DR K PGCS
Sbjct: 418 HGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCS 477
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
W+EV+ VH+F + D H ++Y LE++
Sbjct: 478 WVEVNGVVHEFLAEDAVHCIRADVYTVLEAI 508
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 190/506 (37%), Positives = 291/506 (57%), Gaps = 11/506 (2%)
Query: 23 CNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL-KLSNLTYARFIFDHLTTPNTYLYT 81
C+ + +KQ S L LG S N ++ FC+L K ++ YA +F L P+T+LY
Sbjct: 12 CSSMAEVKQQHSLLLRLGLSTNNHAMSRIFTFCSLSKHGDINYALKLFTTLPNPDTFLYN 71
Query: 82 AMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIV 141
+ A+ S S + Y M++ PN F +P ++++C LE K +H ++
Sbjct: 72 TLFKAFFSLSQTPSLSLLFYSHMLQHCV-TPNAFTFPSLIRACK--LEEEA-KQLHAHVL 127
Query: 142 KSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAA 201
K GF L++ Y G+ + AR++F MSD NVVSWT+++SGY++ G + A
Sbjct: 128 KFGFGGDTYALNNLIHVYFAFGS-LDDARRVFCTMSDPNVVSWTSLVSGYSQWGLVDEAF 186
Query: 202 SLFDSMP-DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
+F+ MP ++ +WN++IA + F +A + FRRM V + ++ LSA
Sbjct: 187 RVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRM--RVEKKMELDRFVAATMLSAC 244
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
G L+ G IH YV + G+ LDS ++ +IDMY KCG L +A F KR++SWN
Sbjct: 245 TGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWN 304
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
MI FA+HG+ E++I +F+EM ++ + PD +TF+++L AC H GLVE+G YF+ M
Sbjct: 305 CMIGGFAMHGKGEDAIRLFKEME--EEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYM 362
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+ I+P EHYGC+VDLL RAGR EEA +V+ M + PD V G+LL C+I+G +
Sbjct: 363 VDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLEL 422
Query: 441 AEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDK 500
E ++IE+DP N G ++L N+Y GKW++V VRK++ DR K PG S IE++
Sbjct: 423 GEEVGNRVIELDPENSGRYVILGNMYASCGKWEQVAGVRKLMDDRGVKKEPGFSMIEMEG 482
Query: 501 QVHQFHSLDKTHPRTEEIYDALESMV 526
V++F + + HP E IY + M+
Sbjct: 483 VVNEFVAGGRDHPLAEAIYAKIYEML 508
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 190/528 (35%), Positives = 300/528 (56%), Gaps = 17/528 (3%)
Query: 3 SVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQ--SQTNFYAFKLVRFCTLKLS 60
S TN+ Q +L++C + LKQ+ TLG S+ A KL+ T +L
Sbjct: 244 SYTNRNAHMNTQTFYFLLQKCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYT-QLG 302
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAY--ASQPAHASSAFS-LYRDMVRRGQPQPNQFIY 117
+ A+ +F+H+ P+ +T +I+ Y SQP A S FS L+ +R P+ F
Sbjct: 303 SPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLR-----PDSFCV 357
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+ +C + ++VH + + P+V AL++ YSRSG I +A +F M
Sbjct: 358 VGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGA-IEVACSVFKTME 416
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
++V SWT++++G+ + DI+ A +FD MP R+ +W ++I G Q + + F+
Sbjct: 417 IKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQE 476
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M E D P +T+V LS G LG +HGYV + LDLD ++NAL+DMY K
Sbjct: 477 MRAEGKD--WPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAK 534
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
G+L A + F K+ + SW +MI+ ALHG+ +++ F +M + P+ VT
Sbjct: 535 SGALVLALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSK---SGXXPNEVTL 591
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+S+L+AC+H GLV +GR+ F+ M + + I+P+I+HYGC+VDLLGRAG EA E+++ M
Sbjct: 592 LSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMP 651
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
I+PD V+W SLL+ C ++G AE A K +IE++P++ G I+L NIY +W++ K
Sbjct: 652 IKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALK 711
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
RK ++DR K PGCSW+EV+ VH+F + D H ++Y LE++
Sbjct: 712 ARKAMRDRRVKKKPGCSWVEVNGVVHEFLAEDAVHCIRADVYTVLEAI 759
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 290/506 (57%), Gaps = 11/506 (2%)
Query: 15 QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN--LTYARFIFDHL 72
+ ++ L+RC+ LKQ+ + + G Q ++ K + FC S+ L YA+ +FD
Sbjct: 16 ETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGF 75
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
P+T+L+ MI ++ S LY+ M+ P N + +P +LK+C ++
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLL-LYQRMLCSSAPH-NAYTFPSLLKACSNLSAFEE 133
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
T +H QI K G+E +L+NSY+ +GN +A LFD + + + VSW ++I GY
Sbjct: 134 TTQIHAQITKLGYENDVYAVNSLINSYAVTGN-FKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
+ G + A +LF M +++ +W ++I+G Q + +A+ F M + ++ P+ V+
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ---NSDVEPDNVS 249
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
L ALSA G L+ GK IH Y+ + + +DS + LIDMY KCG ++EA F
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
KK + +W ++I+ +A HG +I F EM Q I+P+ +TF ++L AC++ GLVE+
Sbjct: 310 KKSVQAWTALISGYAYHGHGREAISKFMEM---QKMGIKPNVITFTAVLTACSYTGLVEE 366
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G+ F M + Y ++P IEHYGC+VDLLGRAG +EA ++ M ++P+ V+WG+LL C
Sbjct: 367 GKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 426
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+I+ + E + LI IDP +GG + ANI+ KWD+ + R+++K++ K PG
Sbjct: 427 RIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPG 486
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEI 518
CS I ++ H+F + D++HP E+I
Sbjct: 487 CSTISLEGTTHEFLAGDRSHPEIEKI 512
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 264/423 (62%), Gaps = 8/423 (1%)
Query: 104 MVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSG 163
M+ +G P PN+ + + +C K++HT +KSGF+ TALV+ Y++ G
Sbjct: 1 MLLKGCP-PNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLG 59
Query: 164 NDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCT 223
+ +AR++FDEM+ R++ +W ++I+GY+R GD++ A LF MP R V +W ++I+G +
Sbjct: 60 V-LMLARQVFDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYS 118
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL 283
QNG+++ A+ F +M E +RPN+VT+ SA G L++G+ I Y NGL
Sbjct: 119 QNGMYTKALEMFLKM--EKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMK 176
Query: 284 DSFISNALIDMYGKCGSLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENSICVFEEM 342
+ ++SN L++MY +CG + AR F+ K+R L SWNSM+ A+HG+S ++ ++++M
Sbjct: 177 NLYVSNTLLEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHGRSNEALQLYDQM 236
Query: 343 MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGR 402
+ I PD VTF+ L+ ACTHGGLV +G F+ M + I P++EHYGC+VDLLGR
Sbjct: 237 L---GEGIEPDDVTFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGR 293
Query: 403 AGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIML 462
AG +EA ++VK M ++PD V+WG+LL C + +FAE A + L +++P N G ++L
Sbjct: 294 AGELQEAYDLVKSMPMKPDSVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNPGNYVIL 353
Query: 463 ANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
NIY +WD V K+RK++K K G S IE + ++H+F DK+HPR EIY L
Sbjct: 354 CNIYASAQRWDGVAKLRKLMKGGQITKAAGYSVIEGEGEIHKFIVEDKSHPRHYEIYALL 413
Query: 523 ESM 525
+
Sbjct: 414 NEI 416
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 174/463 (37%), Positives = 286/463 (61%), Gaps = 9/463 (1%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
ARF+FD ++ + + MI Y SQ AH LY +M G +P+ I VL +C
Sbjct: 170 ARFLFDKMSHRDVVTWNIMIDGY-SQNAHYDHVLKLYEEMKTSGT-EPDAIILCTVLSAC 227
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
K +H I +GF ++T+LVN Y+ G + +AR+++D++ +++V
Sbjct: 228 AHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGA-MHLAREVYDQLPSKHMVVS 286
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
TAM+SGY ++G +++A +FD M ++D+ W+++I+G ++ +A+ F M
Sbjct: 287 TAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRR--- 343
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
I P+Q+T++ +SA + G L K IH Y +NG I+NALIDMY KCG+L +A
Sbjct: 344 RIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKA 403
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R F+ +K + SW+SMIN+FA+HG ++++I +F M ++ NI P+GVTFI +L AC
Sbjct: 404 REVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRM---KEQNIEPNGVTFIGVLYAC 460
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLVE+G+ +F M +RI PQ EHYGC+VDL RA +A+E+++ M P+ ++
Sbjct: 461 SHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVII 520
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WGSL++ C+ +G + EFA +L+E++P++ G ++L+NIY + +WD+V VRK++K
Sbjct: 521 WGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKH 580
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+ K CS IEV+ +VH F D+ H +++EIY L+++V+
Sbjct: 581 KGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVS 623
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/485 (24%), Positives = 200/485 (41%), Gaps = 81/485 (16%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFC----TLKLSNLTYARFIFDHLT 73
+L C + H+KQ+ + + +N KLV C + S L YA +F H+
Sbjct: 17 GLLASCKTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSLFSHIP 76
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
P T ++ ++ P + SLY + R G P ++F +P +LK+ +
Sbjct: 77 NPPTRFSNQLLRQFSRGPT-PENTLSLYLHLRRNGFPL-DRFSFPPLLKAVSKLSALNLG 134
Query: 134 KMVHTQIVKSGF-EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+H K GF P +++AL I+ Y
Sbjct: 135 LEIHGLASKFGFFHADPFIQSAL--------------------------------IAMYA 162
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
G I +A LFD M RDV WN +I G +QN + + + M + P+ +
Sbjct: 163 ACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMK---TSGTEPDAII 219
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL----------- 301
L LSA H G L GK IH ++ NG + S I +L++MY CG++
Sbjct: 220 LCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLP 279
Query: 302 --------------------KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEE 341
++AR FDR +K L W++MI+ +A Q ++ +F E
Sbjct: 280 SKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNE 339
Query: 342 MMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG 401
M R I PD +T +S+++AC + G + Q + + + L+D+
Sbjct: 340 MQR---RRIVPDQITMLSVISACANVGALVQAK-WIHTYADKNGFGRTLPINNALIDMYA 395
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD--FAEFAVKKLIEIDPNNGGY- 458
+ G +A EV + M + + W S++N ++G D A F K I+PN +
Sbjct: 396 KCGNLVKAREVFENMP-RKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFI 454
Query: 459 GIMLA 463
G++ A
Sbjct: 455 GVLYA 459
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 100/187 (53%), Gaps = 11/187 (5%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYAS--QPAHASSAFSLYRDMVRRGQPQPNQF 115
KL + ARFIFD + + ++AMI+ YA QP A L+ +M RR + P+Q
Sbjct: 295 KLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPL---EALQLFNEMQRR-RIVPDQI 350
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
V+ +C +V K +HT K+GF + + AL++ Y++ GN + AR++F+
Sbjct: 351 TMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVK-AREVFEN 409
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVP----AWNSVIAGCTQNGLFSDA 231
M +NV+SW++MI+ + GD +A +LF M ++++ + V+ C+ GL +
Sbjct: 410 MPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEG 469
Query: 232 ISFFRRM 238
FF M
Sbjct: 470 QKFFSSM 476
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 267/422 (63%), Gaps = 8/422 (1%)
Query: 104 MVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSG 163
MV +G +PNQF V+K+C + K H I+K GFE VV+TALV+ Y+R G
Sbjct: 1 MVGKG-VKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCG 59
Query: 164 NDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCT 223
+ + A +FD+MS+R+ +W AMI+G+ + D+K A LF M +RDV +W +VIAG
Sbjct: 60 S-LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYA 118
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL 283
QNG ++++ F +M ++ ++ + LSA L+LG+ H YV ++G L
Sbjct: 119 QNGYGDESLNVFNQM---RKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFAL 175
Query: 284 DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
D + +AL+DMY K GS+++A + FD+ ++ SWNS+I A HG+ +++ +FE+M+
Sbjct: 176 DIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQML 235
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
+ I+P+ ++F+ +L+AC+H GLV +GR YF LMT+ Y I P + HY C++DLLGRA
Sbjct: 236 QA---GIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRA 292
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLA 463
G +EA + GM +EPD VWG+LL C+I+G T+ A+ + L+ ++ G ++L+
Sbjct: 293 GCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLS 352
Query: 464 NIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
NIY G+WD+ KVRK++KDR K PG SWIEV +H F + + +HP+ +EI++ LE
Sbjct: 353 NIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLE 412
Query: 524 SM 525
S+
Sbjct: 413 SL 414
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 139/285 (48%), Gaps = 39/285 (13%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
++ A +F ++ + +TA+I YA Q + + +++ M + G + ++FI V
Sbjct: 91 DMKKALKLFYEMSERDVVSWTAVIAGYA-QNGYGDESLNVFNQMRKTGM-KSDRFIMGSV 148
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
L +C D+ + H +V+SGF VV +ALV+ Y++SG+ + A ++FD+M RN
Sbjct: 149 LSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGS-MEDACQVFDKMPQRN 207
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
VSW ++I+ GC Q+G +DA+ F +M
Sbjct: 208 EVSWNSIIT-------------------------------GCAQHGRGNDAVLLFEQM-- 234
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN-GLDLDSFISNALIDMYGKCG 299
+ I+PN+++ V LSA HTG++ G+ + +N G+ D +ID+ G+ G
Sbjct: 235 -LQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAG 293
Query: 300 SLKEARRAFD-RNSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
L EA + + ++ W +++ + +HG +E + + E ++
Sbjct: 294 CLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLL 338
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 183/514 (35%), Positives = 301/514 (58%), Gaps = 13/514 (2%)
Query: 15 QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
+++++++ C + +KQ + L T A KL++ ++L+YA +FD +
Sbjct: 18 RLVSLIDSCKSMQQIKQTHAQLITTALISHPVSANKLLKLAAC--ASLSYAHKLFDQIPQ 75
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
P+ ++Y MI A++ P ++ ++R + + PN++ + +C + L + +
Sbjct: 76 PDLFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGE 135
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
V VK G E V AL+ Y + G +G ++K+F DR++ SW +I+ Y
Sbjct: 136 QVRIHAVKVGLENNVFVVNALIGMYGKWGL-VGESQKVFQWAVDRDLYSWNTLIAAYVGS 194
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G++ A LFD M +RDV +W+++IAG Q G F +A+ FF +M + +PN+ TLV
Sbjct: 195 GNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKM---LQIGPKPNEYTLV 251
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF-DRNSK 313
AL+A + L GK IH Y+ + + ++ + ++IDMY KCG ++ A R F + K
Sbjct: 252 SALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVK 311
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+++ WN+MI FA+HG +I VFE+M + I P+ VTFI+LLNAC+HG +VE+G
Sbjct: 312 QKVWLWNAMIGGFAMHGMPNEAINVFEQM---KVEKISPNKVTFIALLNACSHGYMVEEG 368
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
+ YF+LM Y I P+IEHYGC+VDLL R+G +EA +++ M + PD +WG+LLN C+
Sbjct: 369 KLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNACR 428
Query: 434 IYGRTDFAEFAVKKLIE-IDPNNGGYGIMLANIYGELGKWDEVRKVR-KMLKDRNAYKTP 491
IY + + + ++I+ +DPN+ G ++L+NIY G+W+E R +R K R+ K P
Sbjct: 429 IYKDMERG-YRIGRIIKGMDPNHIGCHVLLSNIYSTSGRWNEARILREKNEISRDRKKIP 487
Query: 492 GCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
GCS IE+ HQF D++HP++ EIY L+ M
Sbjct: 488 GCSSIELKGTFHQFLVGDQSHPQSREIYSFLDEM 521
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 180/487 (36%), Positives = 290/487 (59%), Gaps = 10/487 (2%)
Query: 42 SQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLY 101
S N Y++ + KL + AR +FD + + + M+ A+A Q + A Y
Sbjct: 122 SARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHA-QCGYWDEALRFY 180
Query: 102 RDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSR 161
+ + G Q N F + VL C + E T+ VH QI+ +GF V+ ++++++Y +
Sbjct: 181 SEFRQLG-IQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVK 239
Query: 162 SGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAG 221
G +G ARKLFDEMS R+V++WT M+SGY + GD+K+A LF MP+++ +W ++I+G
Sbjct: 240 CGL-MGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISG 298
Query: 222 CTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL 281
+NG+ A+ F +M + ++RP+Q T L A L+ GK IH Y+ R
Sbjct: 299 YARNGMGHKALELFTKMML---FHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINF 355
Query: 282 DLDSFISNALIDMYGKCGSLKEARRAFD-RNSKKRLTSWNSMINSFALHGQSENSICVFE 340
++ + +ALIDMY KCGSL R+ FD +K + WN++I++ A HG E +I + +
Sbjct: 356 QPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLD 415
Query: 341 EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL 400
+M+R +PD +TF+ +LNAC+H GLV+QG +F+ M+ Y I P EHY CL+DLL
Sbjct: 416 DMVR---SGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLL 472
Query: 401 GRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI 460
GRAG FEE ++ ++ M +PD+ VW +LL C+I+G + A ++LIE++P + +
Sbjct: 473 GRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYV 532
Query: 461 MLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYD 520
+L++IY LG+W+ V+KVR+++ +R K SW+E++ +VH F D +HP E+IY
Sbjct: 533 LLSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIENKVHSFSVSDSSHPLKEQIYS 592
Query: 521 ALESMVA 527
LE +
Sbjct: 593 VLEQLAG 599
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 180/372 (48%), Gaps = 41/372 (11%)
Query: 97 AFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQY-PVVETAL 155
A S ++ RRG ++ + +L+ C D R K VH + +G ++ + L
Sbjct: 43 AVSSLENLARRGLRLDSRTL-ASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHL 101
Query: 156 VNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAW 215
+N Y++ G ++ ARK+FD+MS RN+ SW M+SGY ++G IK A LFD MP++DV +W
Sbjct: 102 INMYAKCGKEVE-ARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSW 160
Query: 216 NSVIAGCTQNGLFSDAISF---FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVI 272
N+++ Q G + +A+ F FR++G++ + +T+ L +G L + +
Sbjct: 161 NTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVG------LTRQV 214
Query: 273 HGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQS 332
HG + G + +S++++D Y KCG + +AR+ FD S + + +W +M++ +A G
Sbjct: 215 HGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDM 274
Query: 333 ENSICVFEEM----------------------------MRCQDHNIRPDGVTFISLLNAC 364
+++ +F EM + ++RPD TF S L AC
Sbjct: 275 KSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCAC 334
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
++ G+ + + +P L+D+ + G +V M + D V+
Sbjct: 335 ASIASLKHGKQIHAYLLRI-NFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVL 393
Query: 425 WGSLLNGCKIYG 436
W ++++ +G
Sbjct: 394 WNTIISALAQHG 405
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 190/520 (36%), Positives = 302/520 (58%), Gaps = 14/520 (2%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT-LKLSNLTYARFIFD 70
L Q++ L+ C ++ +KQ+ + + G Q+ + KL+R T L + Y IF+
Sbjct: 45 LESQIVTTLDGCKNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFN 104
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ PN +LY A+I Y + S + + ++R+ P F + + K+C ++
Sbjct: 105 QVNYPNPFLYNALIRGYLIEERLKES--TEFYSLMRKEGVVPVSFTFTALFKACGAKMDV 162
Query: 131 RGTKMVHTQ-IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
+ +H Q I+ GF + V ++++ Y + G + RK+FDEM +R+V+SWT +IS
Sbjct: 163 GLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGF-LECGRKVFDEMPNRDVISWTELIS 221
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
Y + G++++A LFD +P +D+ AW +++G QN +AI FF +M + +
Sbjct: 222 AYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQ---EFGVETD 278
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRN--GLDLDSFISNALIDMYGKCGSLKEARRA 307
++TL+ +SA G + I ++ G + +ALIDMY KCGS+ +A R
Sbjct: 279 EITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRV 338
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F ++ + S++SMI FA+HG+ +++ +F+EM++ + I+P+ VTFI +L AC+H
Sbjct: 339 FQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTE---IKPNRVTFIGVLTACSHA 395
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
G+VEQG F+LM K Y I+P +HY C+VDLLGRAGR +EA E+VK M IEP VWG+
Sbjct: 396 GMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGA 455
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LL C+I+ D A A L E++P G I+LANIY G+W++V VRK+++ R
Sbjct: 456 LLGACRIHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGL 515
Query: 488 YKTPGCSWIEVDK-QVHQFHSLDKTHPRTEEIYDALESMV 526
K P SWIE +K VH+F S D THPR+ EI ALE ++
Sbjct: 516 RKNPAFSWIESEKGMVHEFFSGDMTHPRSGEIKQALEDLL 555
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 184/507 (36%), Positives = 303/507 (59%), Gaps = 12/507 (2%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDH 71
+Q+ L++LE+C ++ +KQ+ S L F A K++ F +++++A +F
Sbjct: 10 SQRCLSLLEQCRTMSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSSNADISHAYKLFLS 69
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
L T+++ +I + + +A+ A SLY++M++ G PN + + VL++C D S
Sbjct: 70 LPHRTTFIWNTIIRIFVEKNENAT-ALSLYKNMLQTGF-LPNNYTFSFVLRACTD--NSP 125
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
H Q++K G+E Y V L++ Y+ + + + ARKLFD + R+V++WTA+I+GY
Sbjct: 126 VGLASHAQVIKLGWESYDFVLNGLIHLYA-NWSSVEAARKLFDVSTCRDVITWTALINGY 184
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
+ G ++ A LFD MP+R+ +W+++I G G+F +A+ F + + +RPN
Sbjct: 185 VKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLT---GLRPNHA 241
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
+V AL+A + G L G+ IH YV RNG +LD + AL+DMY KCG ++ A F++
Sbjct: 242 GIVGALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKM 301
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K ++ S+I+ A HGQS ++I +F M Q + P+ VTFI +L+AC+ GLV+
Sbjct: 302 PDKDAFAFTSLISGLANHGQSADAIQLFGRM---QSEKVIPNEVTFICVLSACSRMGLVD 358
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G F M+ Y IEP ++HYGC+VDLLGRAG EEA +V+ M +EPD V G+LLN
Sbjct: 359 EGLRIFNCMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNS 418
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C+++G + + V+ L+E ++GG ++L+N+Y +WD V KVRK + + K P
Sbjct: 419 CRVHGDVELGKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKKVP 478
Query: 492 GCSWIEVDKQVHQFHSLDKTHPRTEEI 518
GCS IE+D V +F + D ++ R E++
Sbjct: 479 GCSSIEIDGSVSEFIAGDMSYLRVEDV 505
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 287/523 (54%), Gaps = 41/523 (7%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYA- 88
+++ SF+ LG A L+ K + A+ +FD +T N + A+I+ Y
Sbjct: 162 RKIHSFVVKLGLGSCVPVATSLLNMYA-KCGDPVIAKVVFDRMTVKNISTWNALISLYMQ 220
Query: 89 -----------------------------SQPAHASSAFSLYRDMVRRGQPQPNQFIYPH 119
SQ + A +++ M+ +P+ F
Sbjct: 221 SGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLAS 280
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE--MS 177
+L +C ++ + K +H I+++ E V AL++ Y++SG + IAR + + S
Sbjct: 281 ILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGG-VEIARLIVEHNRTS 339
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+ N++++T+++ GYT++G++K A +F+ + DRDV AW ++I G QNGL++DA+ FR
Sbjct: 340 NLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRL 399
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M V++ PN TL LS +L+ GK IH + G ++NALI MY K
Sbjct: 400 M---VNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAK 456
Query: 298 CGSLKEARRAFD-RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
G++ A+R FD N KK + SW SMI + A HG + +I +FE M+ ++PD +T
Sbjct: 457 TGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSV---GMKPDHIT 513
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
++ +L+ACTH GLVEQGR Y+ +MT+ + IEP + HY C++DL GRAG +EA ++ M
Sbjct: 514 YVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESM 573
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
IEPD + WGSLL CKI+ D A+ A ++L+ IDP N G + LAN+Y GKW+
Sbjct: 574 PIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAA 633
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
+ RK++KDR K G SWI + +VH F D HP+ +EIY
Sbjct: 634 QTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIY 676
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 214/463 (46%), Gaps = 59/463 (12%)
Query: 110 PQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIA 169
P ++F + H+L++ + + + VH QI+K G + L+ Y+++G+ + A
Sbjct: 7 PTSSEF-FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS-LRFA 64
Query: 170 RKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
+FDEM ++ SW +ISGY + G+ + + L MPD D +W ++I G Q GLF
Sbjct: 65 HHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFD 124
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
+AI F +M +S+ + P+Q T+ LS+ L +G+ IH +V + GL ++
Sbjct: 125 NAIWMFAKM---ISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVAT 181
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM------- 342
+L++MY KCG A+ FDR + K +++WN++I+ + GQ E + FE+M
Sbjct: 182 SLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVS 241
Query: 343 ----------------------MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
+ +++PD T S+L+AC + + G+
Sbjct: 242 WNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGK-----Q 296
Query: 381 TKTYRIEPQIEHYG----CLVDLLGRAGRFEEALEVVKGMKIEPDEVV-WGSLLNGCKIY 435
Y + + E G L+ + ++G E A +V+ + ++ + SLL+G
Sbjct: 297 IHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKL 356
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML----KDRNAYK-- 489
G A KL D + + M+ Y + G W++ ++ +++ + N+Y
Sbjct: 357 GNVKPAREIFNKL--RDRDVVAWTAMIVG-YVQNGLWNDALELFRLMVNEGPEPNSYTLA 413
Query: 490 -----TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+ + +E KQ+H ++ T + +AL +M A
Sbjct: 414 AMLSVSSSLTILEHGKQIHA-SAIKAGESSTPSVTNALIAMYA 455
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 183/492 (37%), Positives = 277/492 (56%), Gaps = 30/492 (6%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+ + AR +FD + N + AMI AY Q H A SL+ +M + I
Sbjct: 245 RFGKIAEARRLFDQMPIRNVVAWNAMIAAYV-QNCHVDEAISLFMEMPEKNSISWTTVIN 303
Query: 118 PHV----LKSCPDVLESRGTKMVHTQIVK-SGFEQYPVVETA-----------------L 155
+V L +L + V Q SG+ Q ++ A +
Sbjct: 304 GYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTM 363
Query: 156 VNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAW 215
+ YS+ G + A LF +M +++VSW M++ Y +VG + A +F+ M ++++ +W
Sbjct: 364 IAGYSQCGR-MDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSW 422
Query: 216 NSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGY 275
NS+I+G TQNG + DA+ F MG E +P+Q T C LS+ H LQ+GK +H
Sbjct: 423 NSLISGLTQNGSYLDALKSFMLMGHE---GQKPDQSTFACGLSSCAHLAALQVGKQLHQL 479
Query: 276 VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
V ++G D F+SNALI MY KCGS+ A F + SWNS+I ++AL+G +
Sbjct: 480 VMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREA 539
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ +F +M + + PD VTF+ +L+AC+H GL++QG FK M + Y IEP EHY C
Sbjct: 540 LKLFHKM---EVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYAC 596
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNN 455
+VDLLGRAGR EEA ++V+GMKI + +WG+LL C+I+G + A+FA +KL+E +P+
Sbjct: 597 MVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHK 656
Query: 456 GGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRT 515
++L+N+ E G+WDEV +VR+++K++ A K PG SWIE+ +VH F S D HPR
Sbjct: 657 TSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDPAHPRA 716
Query: 516 EEIYDALESMVA 527
E+ L S+ A
Sbjct: 717 VELCHILRSLTA 728
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/478 (21%), Positives = 210/478 (43%), Gaps = 83/478 (17%)
Query: 32 LQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQP 91
++S L ++G+ + + L K + A +F H+T NT + +MI+A+A
Sbjct: 1 MKSSLKSVGEHGSYVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKN- 59
Query: 92 AHASSAFSLYRDMVRRGQPQPNQFIYPHV----LKSCPDVLESRGTKMVHT--------- 138
S A L+ M +R N I ++ ++ + + T+ +++
Sbjct: 60 GRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYT 119
Query: 139 ---QIVKS-------GFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
++ K+ ++ PV A+V Y+++ AR+LFD M +++VSW +M+
Sbjct: 120 RNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKN-RQFDEARRLFDAMPAKDLVSWNSML 178
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
+GYTR G+++ F+ M +RDV +WN ++ G + G + + FF ++ P
Sbjct: 179 TGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIP-------NP 231
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
N V+ V L + + G + EARR F
Sbjct: 232 NTVSWVTMLCG-----------------------------------FARFGKIAEARRLF 256
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
D+ + + +WN+MI ++ + + +I +F EM + +++ +++N G
Sbjct: 257 DQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEM-------PEKNSISWTTVINGYVRMG 309
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
+++ R M YR + ++ + R ++A ++ + I D V W ++
Sbjct: 310 KLDEARQLLNQM--PYR---NVAAQTAMISGYVQNKRMDDARQIFNQISIR-DVVCWNTM 363
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+ G GR D A K++++ D + + M+A+ Y ++G+ D K+ + +K++N
Sbjct: 364 IAGYSQCGRMDEALHLFKQMVKKDIVS--WNTMVAS-YAQVGQMDAAIKIFEEMKEKN 418
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 184/486 (37%), Positives = 287/486 (59%), Gaps = 13/486 (2%)
Query: 45 NFYAFKLVRFCTLKLSNLTYARFIFDHLT-TPNTYLYTAMITAYASQPAHASSAFSLYRD 103
N + + C+ L +YA +F +T P+ YLY +I A +S P H ++ LY +
Sbjct: 10 NLLLSRFIHACS-SLGFYSYAYSLFTSITHAPDIYLYNNIIKALSSSPTHPKASIFLYNN 68
Query: 104 MVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSG 163
+ G +P+ + +P LK+ + + +H+Q ++ G V TA V YS G
Sbjct: 69 IQLAGL-RPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAFVQMYSSFG 127
Query: 164 ND-IGIARKLFD--EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIA 220
+ I ARK+FD MS +V W AM++GY + GD+ NA LF+ MP R+V +W ++I
Sbjct: 128 SGCICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVISWTALIT 187
Query: 221 GCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG 280
G Q DAI+ FRRM +E N+ P+++ ++ AL+A G L+LG+ I Y+ R G
Sbjct: 188 GYAQANRPHDAIALFRRMQLE---NVEPDEIAMLVALTACARLGALELGEWIRHYIDRLG 244
Query: 281 LDLDSF-ISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
L + ++NALIDMY K G +K A + F+ + K + +W +MI ALHG ++ +F
Sbjct: 245 LLTTNIPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEALEMF 304
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
M R + ++P+ +TFI++L+AC+H GLV+ GR YF M Y IEP+IEHYGC++DL
Sbjct: 305 SRMERAR---VKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMIDL 361
Query: 400 LGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYG 459
LGRAG +EA ++ M EP+ V+WGSLL C +G + E A++ L+E++P+N G
Sbjct: 362 LGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLELEPDNSGNY 421
Query: 460 IMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
+L+NIY G+W+E R VRK++ D K PG S IEV+ +VH+F + + +H + + I
Sbjct: 422 ALLSNIYASRGRWNESRVVRKVMWDAGVKKMPGGSLIEVNNRVHEFIAGEISHSQFDRIQ 481
Query: 520 DALESM 525
+ L +
Sbjct: 482 EVLSKI 487
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 172/511 (33%), Positives = 301/511 (58%), Gaps = 10/511 (1%)
Query: 17 LAILER-CNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFC-TLKLSNLTYARFIFDHLTT 74
L+ILE+ C + L+++ + L G ++ ++ FC T ++ YA +F + +
Sbjct: 27 LSILEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLVFTQIHS 86
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
PN + + +I + SQ + A SL+ DM+ QP++ YP V K+ + +
Sbjct: 87 PNLFSWNTIIRGF-SQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQLGLAHYGA 145
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H +++K G + P + ++ Y+ G + + ++ M D ++V+W +MI G +
Sbjct: 146 QLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERM-DFDIVAWNSMIMGLAKC 204
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G++ + LFD MP R+ +WNS+I+G +NG +A+ F +M E I+P++ T+V
Sbjct: 205 GEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEE---RIKPSEFTMV 261
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
L+A G L+ G+ IH Y+ +N +L+ ++ ++IDMY KCGS+ EA + F+ K
Sbjct: 262 SLLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLK 321
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
L+SWN+MI A++G +I +F R + N+RPD VTF+ +L AC + GLV++ +
Sbjct: 322 GLSSWNTMILGLAMNGCENEAIQLFS---RLECSNLRPDDVTFVGVLTACNYSGLVDKAK 378
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
YF LM+KTY+IEP I+HY C+VD LGRAG EEA E+++ M + PD ++W SLL+ C+
Sbjct: 379 EYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSACRK 438
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+G + A+ A K ++++D N+ ++L+NIY +++E + R +K++ K PGCS
Sbjct: 439 HGNVELAKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEKEPGCS 498
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
IEV+ ++H+F + + HP+ +E+Y L +
Sbjct: 499 LIEVNGEIHEFVAGGRLHPQAQEVYSLLNEL 529
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 191/574 (33%), Positives = 300/574 (52%), Gaps = 72/574 (12%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
L ++ L L +C NH+K++ + + + A KL+ +L + A +F+
Sbjct: 22 LFEEKLQDLHKCTDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSL-CHQMNLAVNVFNQ 80
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ PN +LY +I A+ Q + + AF+ + DM + G N F YP +LK+C
Sbjct: 81 IQDPNVHLYNTLIRAHV-QNSQSLKAFATFFDMQKNGLFADN-FTYPFLLKACNGKGWLP 138
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSG---------------------------- 163
+M+H + K GF V +L++SYS+ G
Sbjct: 139 TVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGG 198
Query: 164 ----NDIGIARKLFDEMSDR-------------------------------NVVSWTAMI 188
D+G ARKLFDEM++R NVVSW+ M+
Sbjct: 199 LVKAGDLGRARKLFDEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMV 258
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
SGY + GD++ A LFD MP +++ W +I+G + GL +A + + +M + ++P
Sbjct: 259 SGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQME---AAGLKP 315
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
+ TL+ L+A +G+L LGK +H + + + +SNAL+DMY KCG + +A F
Sbjct: 316 DDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIF 375
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
+ S + L SWN M+ A+HG E +I +F +M Q +PD VT I++L ACTH G
Sbjct: 376 NEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKM---QQEGFKPDKVTLIAILCACTHAG 432
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
V+QG +YF M + + I P IEHYGC++DLLGR GR EEA +V+ M +EP++V+WG+L
Sbjct: 433 FVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTL 492
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L C+++ AE + +LI ++ ++ G ML+NI+ G W+ V +R +K
Sbjct: 493 LGACRVHNAVPLAEKVLDRLITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQ 552
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
K G S IE+D +VH+F DK+HP T++IY L
Sbjct: 553 KPSGASSIELDDEVHEFTVFDKSHPETDKIYQIL 586
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 179/463 (38%), Positives = 275/463 (59%), Gaps = 16/463 (3%)
Query: 71 HLTTPN--TYLYTAMITAY----ASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
HL+ PN ++++ +I A PA A SLY M R P+ +P +L+S
Sbjct: 16 HLSHPNIESFVWNNLIRASTRSRVQNPAF-PPALSLYLRM-RLHAVLPDLHTFPFLLQSI 73
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
RG + +H QI+ G P V+T+L+N YS G AR+ FDE++ ++ SW
Sbjct: 74 NT--PHRG-RQLHAQILLLGLANDPFVQTSLINMYSSCGTPT-FARQAFDEITQPDLPSW 129
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
A+I + G I A LFD MP+++V +W+ +I G G + A+S FR +
Sbjct: 130 NAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGS 189
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+RPN+ T+ LSA G LQ GK +H Y+ + G+ +D + +LIDMY KCGS++ A
Sbjct: 190 QLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERA 249
Query: 305 RRAFDR-NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
+ FD +K + +W++MI +F++HG SE + +F M+ + +RP+ VTF+++L A
Sbjct: 250 KCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMV---NDGVRPNAVTFVAVLCA 306
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C HGGLV +G YFK M Y + P I+HYGC+VDL RAGR E+A VVK M +EPD +
Sbjct: 307 CVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVM 366
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+WG+LLNG +I+G + E A+ KL+E+DP N ++L+N+Y +LG+W EVR +R +++
Sbjct: 367 IWGALLNGARIHGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLME 426
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
R K PGCS +EVD + +F + D +HP +Y L+ ++
Sbjct: 427 VRGIKKLPGCSLVEVDGVIREFFAGDNSHPELLNLYVMLDEIM 469
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 136/316 (43%), Gaps = 47/316 (14%)
Query: 42 SQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLY 101
+Q + ++ + K + AR +FD + N ++ MI Y S + +A SL+
Sbjct: 122 TQPDLPSWNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEY-KAALSLF 180
Query: 102 RDM--VRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSY 159
R + + Q +PN+F VL +C + + K VH I K+G + V+ T+L++ Y
Sbjct: 181 RSLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMY 240
Query: 160 SRSGNDIGIARKLFDEM-SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDV----PA 214
++ G+ I A+ +FD + +++V++W+AMI+ ++ G + LF M + V
Sbjct: 241 AKCGS-IERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVT 299
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
+ +V+ C GL S+ +F+RM E + P I H G
Sbjct: 300 FVAVLCACVHGGLVSEGNEYFKRMMNEY--GVSP----------MIQHYG---------- 337
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSE 333
++D+Y + G +++A + + W +++N +HG E
Sbjct: 338 ---------------CMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGDVE 382
Query: 334 NSICVFEEMMRCQDHN 349
+++ N
Sbjct: 383 TCEIAITKLLELDPAN 398
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 286/523 (54%), Gaps = 41/523 (7%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYA- 88
+++ SF+ LG A L+ K + A+ +FD +T N + A+I+ Y
Sbjct: 162 RKIHSFVVKLGLGSCVPVATSLLNMYA-KCGDPVIAKVVFDRMTVKNISTWNALISLYMQ 220
Query: 89 -----------------------------SQPAHASSAFSLYRDMVRRGQPQPNQFIYPH 119
SQ + A ++ M+ +P+ F
Sbjct: 221 SGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLAS 280
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE--MS 177
+L +C ++ + K +H I+++ E V AL++ Y++SG + IAR + + S
Sbjct: 281 ILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGG-VEIARLIVEHNRTS 339
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+ N++++T+++ GYT++G++K A +F+ + DRDV AW ++I G QNGL++DA+ FR
Sbjct: 340 NLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRL 399
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M V++ PN TL LS +L+ GK IH + G ++NALI MY K
Sbjct: 400 M---VNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAK 456
Query: 298 CGSLKEARRAFD-RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
G++ A+R FD N KK + SW SMI + A HG + +I +FE M+ ++PD +T
Sbjct: 457 TGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSV---GMKPDHIT 513
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
++ +L+ACTH GLVEQGR Y+ +MT+ + IEP + HY C++DL GRAG +EA ++ M
Sbjct: 514 YVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESM 573
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
IEPD + WGSLL CKI+ D A+ A ++L+ IDP N G + LAN+Y GKW+
Sbjct: 574 PIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAA 633
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
+ RK++KDR K G SWI + +VH F D HP+ +EIY
Sbjct: 634 QTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIY 676
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 214/463 (46%), Gaps = 59/463 (12%)
Query: 110 PQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIA 169
P ++F + H+L++ + + + VH QI+K G + L+ Y+++G+ + A
Sbjct: 7 PTSSEF-FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS-LRFA 64
Query: 170 RKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
+FDEM ++ SW +ISGY + G+ + + L MPD D +W ++I G Q GLF
Sbjct: 65 HHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFD 124
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
+AI F +M +S+ + P+Q T+ LS+ L +G+ IH +V + GL ++
Sbjct: 125 NAIWMFAKM---ISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVAT 181
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM------- 342
+L++MY KCG A+ FDR + K +++WN++I+ + GQ E + FE+M
Sbjct: 182 SLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVS 241
Query: 343 ----------------------MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
+ +++PD T S+L+AC + + G+
Sbjct: 242 WNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGK-----Q 296
Query: 381 TKTYRIEPQIEHYG----CLVDLLGRAGRFEEALEVVKGMKIEPDEVV-WGSLLNGCKIY 435
Y + + E G L+ + ++G E A +V+ + ++ + SLL+G
Sbjct: 297 IHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKL 356
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML----KDRNAYK-- 489
G A KL D + + M+ Y + G W++ ++ +++ + N+Y
Sbjct: 357 GNVKPAREIFNKL--RDRDVVAWTAMIVG-YVQNGLWNDALELFRLMVNEGPEPNSYTLA 413
Query: 490 -----TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+ + +E KQ+H ++ T + +AL +M A
Sbjct: 414 AMLSVSSSLTILEHGKQIHA-SAIKAGESSTPSVTNALIAMYA 455
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/472 (38%), Positives = 272/472 (57%), Gaps = 11/472 (2%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+++ + A F+ + + + +MI+ Y +Q + A ++ M+R P++F
Sbjct: 223 MQVGQMDLAMAQFEQMAERDIVTWNSMISGY-NQRGYDLRALDMFSKMLRDSMLSPDRFT 281
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE- 175
VL +C ++ + + +H+ IV +GF+ +V AL++ YSR G + AR+L ++
Sbjct: 282 LASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGG-VETARRLIEQR 340
Query: 176 -MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
D + +TA++ GY ++GD+ A ++FDS+ DRDV AW ++I G Q+GL+ +AI+
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINL 400
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
FR M V + RPN TL LS L GK IHG ++G +SNALI M
Sbjct: 401 FRSM---VGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITM 457
Query: 295 YGKCGSLKEARRAFDRNSKKRLT-SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
Y K GS+ A RAFD +R T SW SMI + A HG +E ++ +FE M+ +RPD
Sbjct: 458 YAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM---EGLRPD 514
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
+T++ + +ACTH GLV QGR YF +M +I P + HY C+VDL GRAG +EA E +
Sbjct: 515 HITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
+ M IEPD V WGSLL+ C++Y D + A ++L+ ++P N G LAN+Y GKW+
Sbjct: 575 EKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWE 634
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
E K+RK +KD K G SWIEV +VH F D HP+ EIY ++ +
Sbjct: 635 EAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKI 686
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 188/388 (48%), Gaps = 43/388 (11%)
Query: 120 VLKSCPDVLESRGTK--------MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
+L+ C ++L+ K +VH +++KSG + L+N YS++G + ARK
Sbjct: 12 LLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALH-ARK 70
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
LFDEM R SW ++S Y + GD+ ++ FD +P RD +W ++I G G + A
Sbjct: 71 LFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKA 130
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
I R MG + + I P+Q TL L+++ T L+ GK +H ++ + GL + +SN+L
Sbjct: 131 I---RIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSL 187
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH---GQSENSICVFEEMMRCQDH 348
++MY KCG A+ FDR K ++SWN+MI ALH GQ + ++ FE+M
Sbjct: 188 LNMYAKCGDPMMAKVVFDRMVVKDISSWNAMI---ALHMQVGQMDLAMAQFEQMA----- 239
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
D VT+ S+++ G + F M + + P L +L E
Sbjct: 240 --ERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPD---RFTLASVLSACANLE- 293
Query: 409 ALEVVKGMKIEPDEVVWGSLLNG------CKIYGRTDFAEFAVKKLIE----IDPNNGGY 458
++ G +I V G ++G +Y R E A ++LIE D G+
Sbjct: 294 --KLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETA-RRLIEQRGTKDLKIEGF 350
Query: 459 GIMLANIYGELGKWDEVRKVRKMLKDRN 486
+L Y +LG +E + + LKDR+
Sbjct: 351 TALLDG-YIKLGDMNEAKNIFDSLKDRD 377
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/548 (32%), Positives = 299/548 (54%), Gaps = 45/548 (8%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARFIFDHL 72
L++L C ++ L Q+ G +++ KL+ C + +S+ L YAR +
Sbjct: 6 HHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCF 65
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
P+ +++ ++ Y S+ ++ +++ +M+R+G P+ F + V+K+ + R
Sbjct: 66 PEPDAFMFNTLVRGY-SESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRT 124
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSG----------------------------- 163
+H Q +K G E + V T L+ Y G
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 164 -NDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC 222
ND+ AR++FD+M RN SW M++GY + G++++A +F MP RD +W+++I G
Sbjct: 185 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 244
Query: 223 TQNGLFSDAISFFR---RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN 279
NG F+++ +FR R GM PN+V+L LSA +G + GK++HG+V +
Sbjct: 245 AHNGSFNESFLYFRELQRAGMS------PNEVSLTGVLSACSQSGSFEFGKILHGFVEKA 298
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENSICV 338
G ++NALIDMY +CG++ AR F+ +KR + SW SMI A+HGQ E ++ +
Sbjct: 299 GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRL 358
Query: 339 FEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVD 398
F EM + + PDG++FISLL+AC+H GL+E+G YF M + Y IEP+IEHYGC+VD
Sbjct: 359 FNEM---TAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 415
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGY 458
L GR+G+ ++A + + M I P +VW +LL C +G + AE ++L E+DPNN G
Sbjct: 416 LYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGD 475
Query: 459 GIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
++L+N Y GKW +V +RK + + KT S +EV K +++F + +K E
Sbjct: 476 LVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEA 535
Query: 519 YDALESMV 526
++ L+ ++
Sbjct: 536 HEKLKEII 543
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 186/523 (35%), Positives = 298/523 (56%), Gaps = 46/523 (8%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
+ + + IL+ C +I LK++ + + SQ++F K+V C YA +F
Sbjct: 56 REMEDMFVPILKDCPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVCN-HYGETEYANLLF 114
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQ------PNQFIYPHVLKS 123
+ PN +LY AMI AY + A ++Y+ M+ G P P++F +P V+KS
Sbjct: 115 KGVADPNAFLYNAMIRAYKHNKVYVL-AITVYKQML--GNPHGENPIFPDKFTFPFVVKS 171
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
C ++ K VH + K G + VVE +LV Y + + + A ++F+EM++R+
Sbjct: 172 CAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKC-DSLDDAHRVFEEMTERD--- 227
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
A++F +W ++++G + G ++DA+ FFRRM M
Sbjct: 228 -----------------ATIF---------SWTAIVSGYARIGCYADALEFFRRMQMV-- 259
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
I P++++LV L G L+LGK IH Y + G + + NALI+MY KCGS+ +
Sbjct: 260 -GIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQ 318
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
RR FD+ ++ + SW++MI A HG++ +I +F+EM Q I P +TF+ LL A
Sbjct: 319 GRRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEM---QKAKIEPSIITFVGLLTA 375
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C H GL+ +G YF+ M + Y IEP +EHYGCLV+LLG +GR ++ALE+VK M +PD
Sbjct: 376 CAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSP 435
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+WGSLL+ C+ +G A A++ L+E++P + G ++L+N+Y +LGKWD V ++RK+++
Sbjct: 436 IWGSLLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMR 495
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
++ KTPGCS IEVD V +F S D + P ++ I L+ +V
Sbjct: 496 SKSMKKTPGCSSIEVDNMVQEFASGDDSKPFSKAICRVLKLLV 538
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/545 (33%), Positives = 299/545 (54%), Gaps = 45/545 (8%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARFIFDHLTTP 75
L++L C ++ L Q+ G +++ KL+ C + +S+ L YAR + P
Sbjct: 1 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 60
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ +++ ++ Y S+ ++ +++ +M+R+G P+ F + V+K+ + R
Sbjct: 61 DAFMFNTLVRGY-SESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 119
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSG------------------------------ND 165
+H Q +K G E + V T L+ Y G ND
Sbjct: 120 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 179
Query: 166 IGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQN 225
+ AR++FD+M RN SW M++GY + G++++A +F MP RD +W+++I G N
Sbjct: 180 VAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHN 239
Query: 226 GLFSDAISFFR---RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLD 282
G F+++ +FR R GM PN+V+L LSA +G + GK++HG+V + G
Sbjct: 240 GSFNESFLYFRELQRAGMS------PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYS 293
Query: 283 LDSFISNALIDMYGKCGSLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENSICVFEE 341
++NALIDMY +CG++ AR F+ +KR + SW SMI A+HGQ E ++ +F E
Sbjct: 294 WIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNE 353
Query: 342 MMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG 401
M + + PDG++FISLL+AC+H GL+E+G YF M + Y IEP+IEHYGC+VDL G
Sbjct: 354 M---TAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYG 410
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIM 461
R+G+ ++A + + M I P +VW +LL C +G + AE ++L E+DPNN G ++
Sbjct: 411 RSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVL 470
Query: 462 LANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDA 521
L+N Y GKW +V +RK + + KT S +EV K +++F + +K E ++
Sbjct: 471 LSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEK 530
Query: 522 LESMV 526
L+ ++
Sbjct: 531 LKEII 535
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/529 (34%), Positives = 300/529 (56%), Gaps = 12/529 (2%)
Query: 1 MVSVTNQLNQTLNQQ--VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK 58
+ S +N + +TL + L +LE C++ LK + + + F A +L+ FC
Sbjct: 3 ITSGSNSILKTLRLKNPKLVLLECCSNARDLKIIHAHMLRTHLFFDVFAASRLIAFCIDS 62
Query: 59 LSNLT-YARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+NL YA + + PN ++Y A+I S + ++F Y +R G P+ +
Sbjct: 63 TTNLLHYAIRVASQIQNPNLFIYNALIRG-CSTSENPENSFHYYIKALRFGL-LPDNITH 120
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
P ++K+C + + H Q +K GFEQ V+ +LV+ Y+ G DI AR +F M
Sbjct: 121 PFLVKACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVG-DINAARSVFQRMC 179
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+VVSWT MI+GY R GD K+A LFD MP+R++ W+++I+G +N F A+ F
Sbjct: 180 RFDVVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEA 239
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
+ E + N+ +V +S+ H G L +G+ H YV RN L L+ + A++DMY +
Sbjct: 240 LQAE---GVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYAR 296
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG++++A F++ +K + W ++I A+HG +E ++ F EM + P +TF
Sbjct: 297 CGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAK---KGFVPRDITF 353
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
++L AC+H G+VE+G F+ M + + +EP++EHYGC+VDLLGRAG+ +A + V M
Sbjct: 354 TAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMP 413
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
++P+ +W +LL C+I+ + E K L+E+ P G+ ++L+NIY KW +V
Sbjct: 414 VKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTV 473
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+R+M+KD+ K PG S IE+D +VH+F DKTHP E+I E ++
Sbjct: 474 MRQMMKDKGVRKPPGYSLIEIDGKVHEFTIGDKTHPEIEKIERIWEDII 522
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 284/482 (58%), Gaps = 22/482 (4%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + AR F+ + + +++ M++ Y S+ A +++R MV G +PN
Sbjct: 157 IKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSK-GEFKKALNVFRKMVLEG-VKPNSIT 214
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVK-SGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
+ +C ++ R + +H +K + +V +LV+ Y++ + +AR+ F
Sbjct: 215 IASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKC-RSVEVARRKFGM 273
Query: 176 MSDRNVVSWTAM--ISGYTRVGDIKNA----------ASLFDSMPDRDVPAWNSVIAGCT 223
+ ++VSW AM ++G+T+ GD K A S+F + RDV WNS+I+ C
Sbjct: 274 IKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACA 333
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL 283
Q+G +A+ R M + N+ N VT+V AL A L+ GK IH ++ R GLD
Sbjct: 334 QSGRSVNALDLLREMNLS---NVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDT 390
Query: 284 DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
+FI N+LIDMYG+CGS++++RR FD ++ L SWN MI+ + +HG +++ +F++
Sbjct: 391 CNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQF- 449
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
+ ++P+ +TF +LL+AC+H GL+E+G YFK+M Y ++P +E Y C+VDLL RA
Sbjct: 450 --RTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRA 507
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLA 463
G+F E LE ++ M EP+ VWGSLL C+I+ D AE+A + L E++P + G +++A
Sbjct: 508 GQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMA 567
Query: 464 NIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
NIY G+W++ K+R ++K+R K PGCSWIEV +++H F D +HP E+I +E
Sbjct: 568 NIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKME 627
Query: 524 SM 525
S+
Sbjct: 628 SL 629
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 132/559 (23%), Positives = 243/559 (43%), Gaps = 111/559 (19%)
Query: 18 AILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDHLT 73
+IL++C + +L+ Q+ + L G F +L+ +C + + AR +FD ++
Sbjct: 15 SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYC--QTGCVEDARRMFDKMS 72
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
N + +TA++ Y + + L+ MV G +P+ F++P V K+C ++ R
Sbjct: 73 ERNVFSWTAIMEMYCGLGDYEET-IKLFYLMVNEG-VRPDHFVFPKVFKACSELKNYRVG 130
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
K V+ ++ GFE V+ ++++ + + G + IAR+ F+E+ ++V W M+SGYT
Sbjct: 131 KDVYDYMLSIGFEGNSCVKGSILDMFIKCGR-MDIARRFFEEIEFKDVFMWNIMVSGYTS 189
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
G+ F A++ FR+M +E ++PN +T+
Sbjct: 190 KGE-------------------------------FKKALNVFRKMVLE---GVKPNSITI 215
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYR-NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
A+SA + +L+ G+ IHGY + LD D + N+L+D Y KC S++ ARR F
Sbjct: 216 ASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIK 275
Query: 313 KKRLTSWNSM-------------------------------------------INSFALH 329
+ L SWN+M I++ A
Sbjct: 276 QTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQS 335
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
G+S N++ + EM N+ + VT +S L AC+ + QG+ + + + ++
Sbjct: 336 GRSVNALDLLREM---NLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC-GLDTC 391
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK--- 446
L+D+ GR G +++ + M + D V W +++ +YG F AV
Sbjct: 392 NFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMIS---VYGMHGFGMDAVNLFQ 447
Query: 447 --KLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
+ + + PN+ + +L+ G +E K KM+K A +D V Q
Sbjct: 448 QFRTMGLKPNHITFTNLLSAC-SHSGLIEEGWKYFKMMKTEYA----------MDPAVEQ 496
Query: 505 FHSLDKTHPRTEEIYDALE 523
+ + R + + LE
Sbjct: 497 YACMVDLLSRAGQFNETLE 515
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 137/314 (43%), Gaps = 39/314 (12%)
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
IY +L+ C + R VH Q+V +G + + + L+ Y ++G
Sbjct: 12 IYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGC----------- 60
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
+++A +FD M +R+V +W +++ G + + I F
Sbjct: 61 ---------------------VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLF 99
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
M V++ +RP+ A ++GK ++ Y+ G + +S + +++DM+
Sbjct: 100 YLM---VNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMF 156
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCG + ARR F+ K + WN M++ + G+ + ++ VF +M+ ++P+ +
Sbjct: 157 IKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVL---EGVKPNSI 213
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
T S ++ACT+ L+ GR K ++ + LVD + E A G
Sbjct: 214 TIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF-G 272
Query: 416 MKIEPDEVVWGSLL 429
M + D V W ++L
Sbjct: 273 MIKQTDLVSWNAML 286
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 189/543 (34%), Positives = 293/543 (53%), Gaps = 41/543 (7%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARFIFDHLTTP 75
L++L C + KQ+ + + LG F A KL+ C + LS+ L YA +F + P
Sbjct: 9 LSLLNICKSLTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNP 68
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ +++ +I S + +M R P+ F + ++K+ ++ R
Sbjct: 69 DVFMHNTLIRGLYESDRPQDSLLK-FIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQ 127
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+H Q + G + + V T L++ Y G +G ARK+FDEM + N ++W AM++ R G
Sbjct: 128 LHCQALVHGLDTHLFVGTTLISMYGECGF-VGFARKVFDEMPEPNAIAWNAMVTACCRGG 186
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQ------------------------------- 224
D+K LFD MP R++ +WN ++AG T+
Sbjct: 187 DMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAH 246
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
NG F +A SFFR + + +RPN+ +L LSA G L+ GK++HG++ ++GL
Sbjct: 247 NGYFEEAFSFFRELQRK---GMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWI 303
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENSICVFEEMM 343
++NAL+D Y KCG++ A+ F+R +R + SW SM+ + A+HG E +I +F +M
Sbjct: 304 VSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKM- 362
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
++ IRPD + FISLL AC+H GLVEQG YF M Y IEP IEHYGC+VDL GRA
Sbjct: 363 --EESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRA 420
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLA 463
G+ ++A E V M I ++W +LL C ++G AE ++L E+DPNN ++L+
Sbjct: 421 GQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLS 480
Query: 464 NIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
N Y GKW + VR+ + ++ KTPG S IEVDK ++ F + K + TEE Y L+
Sbjct: 481 NAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYKKLK 540
Query: 524 SMV 526
++
Sbjct: 541 EII 543
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/483 (37%), Positives = 283/483 (58%), Gaps = 14/483 (2%)
Query: 46 FYAFKLVRFCTLKLS-NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM 104
F A K+V FC L S +L YAR +F+ + P T+ ++I Y ++ A Y+ M
Sbjct: 11 FSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNL-PRQAILFYQLM 69
Query: 105 VRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN 164
+ +G P++F +P + KSC + E K +H K GF ++ L+N YS G
Sbjct: 70 MLQGL-DPDRFTFPSLFKSCGVLCEG---KQLHCHSTKLGFASDAYIQNTLMNMYSNCGC 125
Query: 165 DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP-DRDVPAWNSVIAGCT 223
+ ARK+FD+M +++VVSW MI Y + A LF M ++ WN +I G
Sbjct: 126 LVS-ARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHV 184
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL 283
++ + +A+S F M + ++ ++VT+ L A H G L+LGK +H Y+ + +++
Sbjct: 185 EDSDYEEALSLFNEMQL---SGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEV 241
Query: 284 DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
D + AL+DMY KCGS++ A R F +K + +W ++I A+ GQ ++ +F EM
Sbjct: 242 DVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEM- 300
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
Q ++PD +TF+ +L AC+H GLV +G AYF M Y I+P IEHYGC+VD+LGRA
Sbjct: 301 --QMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRA 358
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLA 463
GR EA ++++ M + PD V LL+ C+I+G AE A ++LIE+DP NGG ++L+
Sbjct: 359 GRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLS 418
Query: 464 NIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
NIY + W+ +K+R+++ +RN K PGCS IEV VH+F D +HP++ EIY+ L+
Sbjct: 419 NIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLD 478
Query: 524 SMV 526
M+
Sbjct: 479 DMM 481
>gi|225450551|ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 184/492 (37%), Positives = 289/492 (58%), Gaps = 13/492 (2%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARFIFDHLTTPNTYLYTAMITAYA 88
K+L + L T G Q + KL+ T S+ L +AR +FD + P+TYLY M YA
Sbjct: 5 KRLHAHLITSGLHQQENHLRKLITLYTSSSSSSLHHARLLFDAIHHPSTYLYNTMFRVYA 64
Query: 89 SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQY 148
+ P A L+R M+R G P P+ + +P +LK+C + + +H Q +K G +
Sbjct: 65 ASPT-PLHALLLHRHMLRHGPP-PDTYTFPFLLKACSALAHLPKGQELHCQALKFGLGGH 122
Query: 149 PVVETALVNSY-SRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM 207
VE +L++ Y S SG D AR++FD M R++ SWT +++ Y +K A +FD M
Sbjct: 123 VFVENSLIHLYGSNSGMDS--ARRVFDGMGYRDIASWTTLLACYANSCSVKAARKVFDEM 180
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
P+R V +++++IA + F +A+ FR + S I P+ ++ L A + G L
Sbjct: 181 PERSVISYSAMIAAYVRGNRFREALDLFREL---FSVKIEPSDSCVMSVLCACANLGALD 237
Query: 268 LGKVIHGYVYRNGLD-LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSF 326
+G+ ++ YV ++ D +DS I+ ALIDM+ KCGS++ A F+ +K + W +M++
Sbjct: 238 VGRWVYSYVCQSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGL 297
Query: 327 ALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRI 386
A+HG E I FE+M+ D ++P+GVTF++LL+ C+H GLV +G YF M + +
Sbjct: 298 AMHGLGEQLIEAFEKMV---DSGVKPNGVTFVALLSGCSHSGLVNEGLYYFDRMESDFGV 354
Query: 387 EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
EP +EH+GC+VDLLGRAG ++A++++ M EP+ +WGSLLN C++Y + E A +
Sbjct: 355 EPTVEHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGSLLNACRVYKNVEIGELAAQ 414
Query: 447 KLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFH 506
LI+ +P NG + L ++Y E G+WDEV KV+ +K+ K PGCS IEV ++F
Sbjct: 415 WLIKDEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFV 474
Query: 507 SLDKTHPRTEEI 518
DK+HP EI
Sbjct: 475 VGDKSHPCAVEI 486
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 169/458 (36%), Positives = 276/458 (60%), Gaps = 9/458 (1%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + + ++A+I + Q A + M + G ++ + L +C ++
Sbjct: 197 LFDEMLEKDMVTWSALIACF-QQNEMYEEAIRTFVGMHKIG-VMVDEVVAVSALSACANL 254
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
L K++H+ +K G E Y ++ AL+ YS+ G DI +ARKLFDE +++SW +M
Sbjct: 255 LVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCG-DIMVARKLFDEAYLLDLISWNSM 313
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
ISGY + + NA ++FDSMP++DV +W+S+I+G QN LF + ++ F+ M M +
Sbjct: 314 ISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMS---GFK 370
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P++ TLV +SA L+ GK +H Y+ RNGL ++ + LIDMY KCG ++ A
Sbjct: 371 PDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEV 430
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F +K +++WN++I A++G E+S+ +F M +C + P+ +TF+ +L AC H
Sbjct: 431 FYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCH---VTPNEITFMGVLGACRHM 487
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GLV++G+ +F M ++I+P ++HYGC+VDLLGRAG+ +EA E++ M + PD WG+
Sbjct: 488 GLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGA 547
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LL CK +G ++ +KLIE+ P++ G+ ++L+NIY GKWD+V ++R M+
Sbjct: 548 LLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRV 607
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PGCS IE + +H+F + DKTHP + I D L M
Sbjct: 608 LKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEM 645
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 237/538 (44%), Gaps = 109/538 (20%)
Query: 40 GQSQTNFYAFKLVRFCT-LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAF 98
G + + A +L++F T ++ Y R IF+ + N +++ MI AY Q AF
Sbjct: 5 GFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYI-QTNSPHFAF 63
Query: 99 SLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNS 158
+LY+ M+ N + YP ++++C K VH ++K GF+ V L+N
Sbjct: 64 TLYKSMLSNYLGADN-YTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINC 122
Query: 159 YSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIK-------------------- 198
+S N + A ++F+E S + VSW ++++GY +G+++
Sbjct: 123 FSVCSN-MTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSM 181
Query: 199 -----------NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
A LFD M ++D+ W+++IA QN ++ +AI F +GM +
Sbjct: 182 IVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTF--VGMH-KIGVM 238
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
++V V ALSA + ++ +GK+IH + G + + NALI MY KCG + AR+
Sbjct: 239 VDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKL 298
Query: 308 FDR-----------------------NSK--------KRLTSWNSMINSFALHGQSENSI 336
FD N+K K + SW+SMI+ +A + + ++
Sbjct: 299 FDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETL 358
Query: 337 CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR---AYFK------------LMT 381
+F+EM Q +PD T +S+++AC +EQG+ AY K +
Sbjct: 359 ALFQEM---QMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLI 415
Query: 382 KTY---------------RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK---IEPDEV 423
Y IE I + L+ L G E +L++ MK + P+E+
Sbjct: 416 DMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEI 475
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLI---EIDPNNGGYGIMLANIYGELGKWDEVRKV 478
+ +L C+ G D + +I +I PN YG M+ ++ G GK E ++
Sbjct: 476 TFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMV-DLLGRAGKLQEAEEL 532
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 185/513 (36%), Positives = 298/513 (58%), Gaps = 12/513 (2%)
Query: 11 TLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT-LKLSNLTYARFIF 69
T + Q ++L C H HL Q+ F+ Q N + + + CT L LS +YA IF
Sbjct: 22 TSSLQFTSLLSNCRHHLHLYQIHGFMLHRALDQDNLFLSQFIDACTSLGLS--SYAFSIF 79
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
+ T P+ LY I A S+ + +A LY +R +P+ + P VLK+ +
Sbjct: 80 SNKTHPDLRLYNTAIKAL-SKTSSPINAIWLYTR-IRIDGLRPDSYSIPSVLKAVVKLSA 137
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
+ +HTQ V S + V T+L+ YS G + ARKLFD + ++V W AM++
Sbjct: 138 VEVGRQIHTQTVSSALDMDVNVATSLIQMYSSCGF-VSDARKLFDFVGFKDVALWNAMVA 196
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GY +VG++K+A +F+ MP R+V +W ++IAG Q +AI FR+M +E + P+
Sbjct: 197 GYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLE---EVEPD 253
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
++ ++ LSA G L+LG+ IH Y+ ++GL + NALIDMY K G+++ A F+
Sbjct: 254 EIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFE 313
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
+K + +W+++I + ALHG +I +F +R + +RP+ VTF+++L+AC+H G+
Sbjct: 314 NMKQKSVITWSTVIAALALHGLGGEAIDMF---LRMEKAKVRPNEVTFVAILSACSHVGM 370
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
V+ GR YF M Y+IEP+IEHYGC++DLL RAG +EA +++ M E + ++WGSLL
Sbjct: 371 VDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAMIWGSLL 430
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
+ + A+ A+K L +++P N G ++L+N Y LGKW+E VRK++++ K
Sbjct: 431 AASNTHRDAELAQLALKHLAKLEPGNSGNYVLLSNTYAALGKWNESGTVRKLMRNAGVKK 490
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
PG S IE++ V++F + D + + EIY L
Sbjct: 491 APGGSVIEINNIVYEFLAGDMSDSQVHEIYHVL 523
>gi|297793453|ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
gi|297310446|gb|EFH40870.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 186/521 (35%), Positives = 292/521 (56%), Gaps = 24/521 (4%)
Query: 5 TNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTY 64
N L + ++++L C + + + + + Q F F+L+R C+ L ++ Y
Sbjct: 21 ANTLRLARRKTLISLLRNCKNNAQVPSIHAKIIRTFHDQDAFVVFELIRVCS-TLDSIDY 79
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A +F +++ PN YLYTAMI + S ++ SLY M+ P+ ++ VLK+C
Sbjct: 80 AYDVFRYVSNPNVYLYTAMIDGFVSS-GRSADGVSLYHRMIH-SSVLPDNYVITSVLKAC 137
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ E R +H+Q++K GF V L+ Y +SG ++ A+K+FDEM DR+ V
Sbjct: 138 -GLDECRE---IHSQVLKLGFGSSRSVGLKLMEIYGKSG-ELADAKKVFDEMPDRDQVVA 192
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T MI+ Y+ G IK A LF + +D W ++I G +N + A+ FR M + V
Sbjct: 193 TVMINCYSECGCIKEALELFQDVKIKDTVCWTAMIDGLVRNREMNKALELFREMQLSVF- 251
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
P ++ + G +H +V ++L +F+ NALI+MY +CG + A
Sbjct: 252 -YLPARIWV-----------RWSSGAGVHSFVENQKMELSNFVGNALINMYSRCGDINVA 299
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+R F K + S+N+MI+ A+HG S +I VF +M+ + RP+ VT ++LLNAC
Sbjct: 300 KRVFKGMRDKDVISYNTMISGLAMHGASVEAINVFRDMV---NRGFRPNQVTLVALLNAC 356
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+HGGL++ G F M + + +EPQIEHYGC+VDLLGR GR EEA ++ M IEPD ++
Sbjct: 357 SHGGLLDIGLEVFNSMWRVFSVEPQIEHYGCIVDLLGRVGRLEEAYRFIENMLIEPDHIM 416
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
G+LL+ CKI+G + E K+L E + + G ++L++IY GKW E ++R+ +++
Sbjct: 417 LGALLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSHIYASSGKWKESTEIRESMRE 476
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PGCS IEVD Q+H+FH D HPR E IY L+ +
Sbjct: 477 SGIEKEPGCSTIEVDNQIHEFHVGDIAHPRKEAIYQRLQEL 517
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 186/495 (37%), Positives = 293/495 (59%), Gaps = 11/495 (2%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFC--TLKLSNLTYARFIFDHLTTPNTYLYTAM 83
I+ LKQ+QS LT + + A K++ + S+L YA +F L +T+++ M
Sbjct: 24 ISQLKQIQSHLTVTATLKDPYAAAKIISLHAHSNARSSLFYAERLFLCLQNKSTFIWNTM 83
Query: 84 ITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKS 143
+ A+ + A AFSLY+ M+ PN F + V+++C DV + H Q+VK
Sbjct: 84 MQAFV-EKNEAVRAFSLYKHMLESNYL-PNNFTFSFVIRACIDVFNLQMGLCFHGQVVKF 141
Query: 144 GFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASL 203
G+E Y V+ L++ Y+ G + +AR +FD R+VV+WT +ISGY G + A L
Sbjct: 142 GWESYDFVQNGLIHLYANCGF-MDLARNMFDMSIKRDVVTWTCLISGYLNSGQVLIAREL 200
Query: 204 FDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHT 263
FD MP+++ +W ++IAG + G F +A+ F M+VS R N+ ++V AL+A
Sbjct: 201 FDRMPEKNPVSWGALIAGYVRIGFFKEALEVF--YDMQVS-GFRLNRASIVGALTACAFL 257
Query: 264 GMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMI 323
G L G+ IH YV R+ + LD + ALIDMY KCG ++ A FD + + ++ +I
Sbjct: 258 GALDQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSVFDEMDDRDVYAFTCLI 317
Query: 324 NSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT 383
+ A H +SE +I +F M QD + P+ VTF+ +LNAC+ G+V++G F+ M+
Sbjct: 318 SGLANHDKSEAAIDLFNRM---QDEGVVPNEVTFVCVLNACSRMGMVDEGLRIFESMSNR 374
Query: 384 YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEF 443
Y IEPQI+HYGCLVDLLGRAG+ EEA +VV+ M ++PD G+LL+ C+++G E
Sbjct: 375 YVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALLDACRVHGDVQLGEE 434
Query: 444 AVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVH 503
V L++ ++GG ++L+N+Y KW++ K+RK ++D+N K PGCS IEV+ V
Sbjct: 435 MVDSLVQRCLDHGGVHVLLSNMYASADKWEDASKIRKKMEDKNIRKLPGCSSIEVNGTVC 494
Query: 504 QFHSLDKTHPRTEEI 518
+F + D+++ E+I
Sbjct: 495 EFVTGDRSYALEEDI 509
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 170/407 (41%), Positives = 257/407 (63%), Gaps = 7/407 (1%)
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
P+ F VLK+C + + K +H K GF ++ ++N Y G ++G A
Sbjct: 8 PDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCG-EMGDAML 66
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
LF++M R+ V+W +I+ + GDI A F MP+++V +W S+I+G Q G ++A
Sbjct: 67 LFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEA 126
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
I F ++ E +RPN+VT+V L+A G L LG+++H Y ++G + + N L
Sbjct: 127 IDLFMKLEDEA---VRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTL 183
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIR 351
IDMY KCG L+ ARR F ++ + SW++MI A+HGQ+E ++C+F EM++ ++
Sbjct: 184 IDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKL---GVK 240
Query: 352 PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALE 411
P+GVTFI LL+AC+H GL+++GR +F MT Y + PQIEHYGC+VDL RAG EEA E
Sbjct: 241 PNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHE 300
Query: 412 VVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGK 471
+ M I+P+ VVWG+LL GCK++ D AE A+K L E+DP N GY ++++NIY E +
Sbjct: 301 FILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAER 360
Query: 472 WDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
W++ +VRK++KDR KT G S I V+ VH+F + D+THP+ E+I
Sbjct: 361 WEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDI 407
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 37/265 (13%)
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
++ P+ T L A + GK IHG + G + F+ N ++++YG CG + +A
Sbjct: 5 DVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDA 64
Query: 305 RRAFD-------------------------------RNSKKRLTSWNSMINSFALHGQSE 333
F+ R K + SW SMI+ F G+
Sbjct: 65 MLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPN 124
Query: 334 NSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
+I +F M+ +D +RP+ VT +S+L AC G ++ GR + TK+ + +
Sbjct: 125 EAIDLF---MKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKS-GFKRNVHVC 180
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDP 453
L+D+ + G E A V M+ E V W +++ G ++G+ + A ++I++
Sbjct: 181 NTLIDMYVKCGCLENARRVFYEME-ERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGV 239
Query: 454 N-NGGYGIMLANIYGELGKWDEVRK 477
NG I L + +G DE R+
Sbjct: 240 KPNGVTFIGLLHACSHMGLIDEGRR 264
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 13/216 (6%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAY--ASQPAHASSAFSLYRDMVRRGQPQPNQF 115
K ++ A F + N +T+MI+ + +P A F D R PN+
Sbjct: 88 KRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVR----PNEV 143
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
VL +C D+ + ++VH KSGF++ V L++ Y + G + AR++F E
Sbjct: 144 TVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGC-LENARRVFYE 202
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVP----AWNSVIAGCTQNGLFSDA 231
M +R VVSW+AMI+G G + A LF M V + ++ C+ GL +
Sbjct: 203 MEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEG 262
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
FF M + + P C + G+L+
Sbjct: 263 RRFFASMTADYG--VIPQIEHYGCVVDLFSRAGLLE 296
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 169/458 (36%), Positives = 277/458 (60%), Gaps = 9/458 (1%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + + ++A+I + Q A + M + G ++ + L +C ++
Sbjct: 332 LFDEMLEKDMVTWSALIACF-QQNEMYEEAIRTFVGMHKIGV-MVDEVVAVSALSACANL 389
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
L K++H+ +K G E Y ++ AL+ YS+ G DI +ARKLFDE +++SW +M
Sbjct: 390 LVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCG-DIMVARKLFDEAYLLDLISWNSM 448
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
ISGY + + NA ++FDSMP++DV +W+S+I+G QN LF + ++ F+ M M +
Sbjct: 449 ISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMS---GFK 505
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P++ TLV +SA L+ GK +H Y+ RNGL ++ + LIDMY KCG ++ A
Sbjct: 506 PDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEV 565
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F +K +++WN++I A++G E+S+ +F M +C ++ P+ +TF+ +L AC H
Sbjct: 566 FYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKC---HVTPNEITFMGVLGACRHM 622
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GLV++G+ +F M ++I+P ++HYGC+VDLLGRAG+ +EA E++ M + PD WG+
Sbjct: 623 GLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGA 682
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LL CK +G ++ +KLIE+ P++ G+ ++L+NIY GKWD+V ++R M+
Sbjct: 683 LLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRV 742
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PGCS IE + +H+F + DKTHP + I D L M
Sbjct: 743 LKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEM 780
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 209/480 (43%), Gaps = 107/480 (22%)
Query: 97 AFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALV 156
AF+LY+ M+ N + YP ++++C K VH ++K GF+ V L+
Sbjct: 197 AFTLYKSMLSNYLGADN-YTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLI 255
Query: 157 NSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIK------------------ 198
N +S N + A ++F+E S + VSW ++++GY +G+++
Sbjct: 256 NCFSVCSN-MTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASN 314
Query: 199 -------------NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
A LFD M ++D+ W+++IA QN ++ +AI F +GM
Sbjct: 315 SMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTF--VGMH-KIG 371
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
+ ++V V ALSA + ++ +GK+IH + G + + NALI MY KCG + AR
Sbjct: 372 VMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVAR 431
Query: 306 RAFDR-----------------------NSK--------KRLTSWNSMINSFALHGQSEN 334
+ FD N+K K + SW+SMI+ +A + +
Sbjct: 432 KLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDE 491
Query: 335 SICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR---AYFKLMTKTYR------ 385
++ +F+EM Q +PD T +S+++AC +EQG+ AY K T
Sbjct: 492 TLALFQEM---QMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTT 548
Query: 386 ---------------------IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK---IEPD 421
IE I + L+ L G E +L++ MK + P+
Sbjct: 549 LIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPN 608
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLI---EIDPNNGGYGIMLANIYGELGKWDEVRKV 478
E+ + +L C+ G D + +I +I PN YG M+ ++ G GK E ++
Sbjct: 609 EITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMV-DLLGRAGKLQEAEEL 667
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 128/296 (43%), Gaps = 40/296 (13%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
LK + + A+ IFD + + +++MI+ YA Q +L+++M G +P++
Sbjct: 453 LKCNLVDNAKAIFDSMPEKDVVSWSSMISGYA-QNDLFDETLALFQEMQMSGF-KPDETT 510
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
V+ +C + K VH I ++G ++ T L++ Y + G + A ++F M
Sbjct: 511 LVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGC-VETALEVFYGM 569
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
++ + +W A+ I G NGL ++ F
Sbjct: 570 IEKGISTWNAL-------------------------------ILGLAMNGLVESSLDMFS 598
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK-VIHGYVYRNGLDLDSFISNALIDMY 295
M ++ PN++T + L A H G++ G+ + ++ + + + ++D+
Sbjct: 599 NMK---KCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLL 655
Query: 296 GKCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQ-DHN 349
G+ G L+EA +R + +W +++ + HG SE V +++ Q DH+
Sbjct: 656 GRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHD 711
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 173/459 (37%), Positives = 274/459 (59%), Gaps = 9/459 (1%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + + +T ++ YA + A A+ L+ MV G +PN + + +
Sbjct: 200 VFDEMPERDVVSWTTLVDGYA-RAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQM 258
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
M+H + + G + ++ ALV+ + + G + AR++FD M ++V SWT+M
Sbjct: 259 GLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGC-VRYAREVFDGMEVKDVYSWTSM 317
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
++ Y + GD+++A LF MP R+V +W+ +IA +Q +A+ FR M ++ +
Sbjct: 318 VNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREM---IAAGVD 374
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIH-GYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
P TLV LSA G L LG+ I+ Y+ N + L + NALIDM+ KCG + EA +
Sbjct: 375 PIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASK 434
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
FD +++ + SWN+MI + A+HGQSE +I +FE++ + NI PD +TF+ LL +C+H
Sbjct: 435 LFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQL---KGENIVPDQITFLGLLASCSH 491
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GLV +GR YFK M YRIEP++EHY C++DLLG+ G EEA EV +GM +E DE WG
Sbjct: 492 SGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWG 551
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+LLN C+++G + KL+E+DP++ G ++++ IY KWD+V+ +R ++DR
Sbjct: 552 ALLNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRG 611
Query: 487 AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PGCS IEV+ + H F D +H +EEIY AL+++
Sbjct: 612 VKKNPGCSSIEVEGKFHDFLVADVSHACSEEIYSALKNI 650
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 135/478 (28%), Positives = 210/478 (43%), Gaps = 90/478 (18%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFI 68
N + +L++LE C L QL + LT G + F A +L+ FC L
Sbjct: 31 NLVVTHPLLSLLESCASFRRLLQLHALLTVTGLAAHRFPASRLLAFCALSTPPRLAHAAA 90
Query: 69 FDHLTTP--NTYLYTAMITAY--ASQPAHASSAFSLYRDMVRRGQP-QPNQFIYPHVLKS 123
+P N Y+ M+ + A PA A L+R +VR P F++ +K+
Sbjct: 91 ILARASPGPNAYMLGTMMRGFLRARLPARA---LGLFRRVVRDRLPADARTFVF--AVKA 145
Query: 124 CPDVLESR------GTKMVHTQIVKSGFEQYPV-VETALVNSYS--RSGNDIGIARKLFD 174
ES G + +H +K GF V V ALV+ Y+ +S +D G K+FD
Sbjct: 146 AAAAAESEHGGTPSGGEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAG---KVFD 202
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
EM +R+VVSWT ++ GY R G A LF M V+ G
Sbjct: 203 EMPERDVVSWTTLVDGYARAGLADEAWRLFCRM----------VVVG------------- 239
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
+RPN VTLV A+SAIG G+L G ++H YV G+ + NAL+DM
Sbjct: 240 ----------GMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDM 289
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG------------------------ 330
+GKCG ++ AR FD K + SW SM+N++A G
Sbjct: 290 FGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMI 349
Query: 331 -------QSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT 383
Q E ++ +F EM+ + P T +S+L+AC G ++ GR ++ +
Sbjct: 350 AAYSQLNQPEEAVWLFREMIAA---GVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVS 406
Query: 384 YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+I + L+D+ + G EA ++ M E + V W +++ ++G+++ A
Sbjct: 407 NKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMA-ERNVVSWNTMIMAHAVHGQSEEA 463
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 347 bits (890), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 178/494 (36%), Positives = 290/494 (58%), Gaps = 11/494 (2%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFDHLT 73
V+++L++C + L+Q+ + + F +L+ FC+L L YA +F +
Sbjct: 9 VVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQ 68
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
PN++++ A+I ++ S R + +F P VLK+C +L
Sbjct: 69 HPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEG 128
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+ VH Q++K+ P V ++V Y G +I +AR++FD M +R+VVSW +MI+GY +
Sbjct: 129 RQVHGQVLKTHLWFDPFVGNSMVRMYIDFG-EIELARRVFDRMPNRDVVSWNSMIAGYLK 187
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
G+I+ A +F++M D+DV W S+I+ QN A+ FR M +S +RP+ +
Sbjct: 188 AGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREM---LSLGLRPDGPAI 244
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS-FISNALIDMYGKCGSLKEARRAFDRNS 312
V LSAI G ++ GK +H YV N ++L S FI +ALIDMY KCG ++ A F S
Sbjct: 245 VSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSIS 304
Query: 313 KKR-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
+R + WNSMI+ A+HG + ++ +F EM R +I P+ +TF+ LL+ C+HGGLVE
Sbjct: 305 HRRNIGDWNSMISGLAIHGLAREALDIFVEMERM---DIEPNEITFLGLLSTCSHGGLVE 361
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G+ YF+ M + Y+I P+I+HYGC++DL GRAGR E+AL V++ M E D + W ++L+
Sbjct: 362 EGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSA 421
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
+G + + A + IE+ P++ ++L+NIY + G+WD+V K+R M++ R K
Sbjct: 422 SMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIA 481
Query: 492 GCSWIEVDKQVHQF 505
GCS + V+ +VH+F
Sbjct: 482 GCSSMLVNGKVHEF 495
>gi|449467271|ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 347 bits (890), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 175/512 (34%), Positives = 302/512 (58%), Gaps = 10/512 (1%)
Query: 13 NQQVLAILER-CNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
NQ L+++++ C + L+Q + L GQ+ +F A +++ FC L N+ YA +F
Sbjct: 23 NQPYLSMVDKYCTTMRDLQQFHAHLIKSGQAIESFAASRILAFCASPLGNMDYAYLVFLQ 82
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ PN + + +I + SQ ++ A L+ DM+ Q +P + YP + K+ + +
Sbjct: 83 MQNPNLFSWNTVIRGF-SQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLGLAH 141
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
+H +I+K G + P + ++ Y+ +G + AR++F++ + +VVSW +MI G
Sbjct: 142 DGAQLHGRIIKLGLQFDPFIRNTILYMYA-TGGFLSEARRIFNQEMEFDVVSWNSMILGL 200
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
+ G+I + LFD MP ++ +WNS+I G +NG+F +A+ F +M E I+P++
Sbjct: 201 AKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEE---RIQPSEF 257
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
T+V L+A G L+ G IH Y+ +N L L++ + A+IDMY KCGS+ A + F++
Sbjct: 258 TMVSLLNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKI 317
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
+ L+SWNSMI A++G + +I VF+ + + +++PD ++F+++L AC HG +V+
Sbjct: 318 PCRSLSSWNSMIFGLAVNGCEKEAILVFKML---ESSSLKPDCISFMAVLTACNHGAMVD 374
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G +F M TYRIEP I+HY +VD++ RAG EEA + +K M IE D ++WG LL+
Sbjct: 375 EGMEFFSRMKNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIEKDAIIWGCLLSA 434
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C+IYG T+ A+ A +K+ E+DP +++ANI+ + + R ++ + K P
Sbjct: 435 CRIYGNTEMAKRAAEKVNELDPEETMGYVLMANIHAWGNNFVGAMEKRVAMRMKKVEKEP 494
Query: 492 GCSWIEVDKQVHQF-HSLDKTHPRTEEIYDAL 522
G S+IEVD++VH+F + H + +EIY L
Sbjct: 495 GGSFIEVDEEVHEFIAGGGRLHRKAQEIYIVL 526
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 193/517 (37%), Positives = 294/517 (56%), Gaps = 22/517 (4%)
Query: 23 CNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT---LKLSNLTYARFIFDHLTTPNTYL 79
C I L Q+ + GQ + A +++RFC L +L YA IF+ + N +
Sbjct: 26 CRTIRDLSQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFS 85
Query: 80 YTAMITAYA-SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHT 138
+ +I ++ S A A +L+ +M+ +PN+F +P VLK+C + + K +H
Sbjct: 86 WNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQGKQIHG 145
Query: 139 QIVKSGFEQYPVVETALVNSYSRSG--NDI------GIARKLFDEMSDR-----NVVSWT 185
+K GF V + LV Y G D I + M DR VV W
Sbjct: 146 LALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRDGEVVLWN 205
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
MI GY R+GD K A LFD M R V +WN++I+G +QNG F DA+ FR M + ++
Sbjct: 206 VMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREM--KKGED 263
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
IRPN VTLV L A+ G L+LG+ +H Y +G+ +D + +ALIDMY KCG +++A
Sbjct: 264 IRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 323
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
F+R ++ + +W++MIN FA+HGQ+ ++I F +M + +RP V +I+LL AC+
Sbjct: 324 MVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM---RQAGVRPSDVAYINLLTACS 380
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
H GLVE+GR YF M +EP+IEHYGC+VDLLGR G +EA E + M I+PD+V+W
Sbjct: 381 HAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDDVIW 440
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
+LL C+++ + + L+++ P++ G + L+N+Y G W EV ++R +K+
Sbjct: 441 KALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEM 500
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+ K PGCSWI++D +H+F D +HPR +EI L
Sbjct: 501 DIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSML 537
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 183/497 (36%), Positives = 288/497 (57%), Gaps = 15/497 (3%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
++++ F+ G N+ L+ +LSN+ A+ +FD +TT ++ + MI+ Y
Sbjct: 217 EKVRGFIVKTGMDLDNYVYNSLIDM-YYELSNVENAKKLFDEMTTRDSVSWNVMISGYV- 274
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKS-GFEQY 148
+ A + +R+M + G +P++ L +C + +H + K GF
Sbjct: 275 RCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTR 334
Query: 149 PVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP 208
++ AL++ Y++ G + IAR +FDEMS +NV+ WT+MISGY GD++ A LFD P
Sbjct: 335 --IDNALLDMYAKCGC-LNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSP 391
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
RDV W ++I G Q F DA++ FR M ++ I+P++ T+V L+ G L+
Sbjct: 392 VRDVVLWTAMINGYVQFHHFDDAVALFREMQIQ---KIKPDKFTVVTLLTGCAQLGALEQ 448
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
GK IHGY+ N + +D + ALI+MY KCG + ++ F K SW S+I A+
Sbjct: 449 GKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAM 508
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
+G++ ++ +F EM R +PD +TFI +L+AC+HGGLVE+GR +F M K +RIEP
Sbjct: 509 NGKTSEALRLFSEMERV---GAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEP 565
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV---WGSLLNGCKIYGRTDFAEFAV 445
++EHYGC++DLLGRAG +EA E+++ + IE E+V +G+LL+ C+I+ D E
Sbjct: 566 KVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLA 625
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
KKL I+ + +LANIY + +W++ +KVR+ +K+ K PGCS IEVD VH+F
Sbjct: 626 KKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEF 685
Query: 506 HSLDKTHPRTEEIYDAL 522
D +HP EI L
Sbjct: 686 LVGDPSHPEMIEICSML 702
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 212/464 (45%), Gaps = 74/464 (15%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT-LKLSNLTYARFI 68
QT + + L C ++ LKQ+QS + +G KL+ FC L NL YA I
Sbjct: 94 QTNKKSCIECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKI 153
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
F+++ P+ ++Y M+ YA + L++ + R P+ F YP VLK+ +
Sbjct: 154 FNYVQDPSLFVYNVMVKIYAKR-GILRKVLLLFQQL-REDGLWPDGFTYPFVLKAIGCLR 211
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ R + V IVK+G + V +L++ Y N + A+KLFDEM+ R+ VSW MI
Sbjct: 212 DVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSN-VENAKKLFDEMTTRDSVSWNVMI 270
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
SGY R C + F DAI+ FR M E N +P
Sbjct: 271 SGYVR----------------------------CRR---FEDAINTFREMQQE--GNEKP 297
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK----------- 297
++ T+V LSA L+LG IH YV R L + I NAL+DMY K
Sbjct: 298 DEATVVSTLSACTALKNLELGDEIHNYV-RKELGFTTRIDNALLDMYAKCGCLNIARNIF 356
Query: 298 --------------------CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSIC 337
CG L+EAR FD++ + + W +MIN + ++++
Sbjct: 357 DEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVA 416
Query: 338 VFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLV 397
+F EM Q I+PD T ++LL C G +EQG+ + + RI + L+
Sbjct: 417 LFREM---QIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDEN-RITMDVVVGTALI 472
Query: 398 DLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
++ + G +++LE+ ++ + D W S++ G + G+T A
Sbjct: 473 EMYSKCGCVDKSLEIFYELE-DKDTASWTSIICGLAMNGKTSEA 515
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 195/534 (36%), Positives = 289/534 (54%), Gaps = 43/534 (8%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHL 72
QQ + C I LKQ+ + + G + +L+ ++ +S + YA +F H+
Sbjct: 14 QQRSQLWRSCTTIGTLKQIHASMIVKGFNSNTSALRELIYASSIAISGTMAYAHQLFPHI 73
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
T P+T+++ MI A P+ +A SLY M G +P++F +P VLK+C + +
Sbjct: 74 TEPDTFMWNTMIRGSAQSPS-PLNAISLYSQM-ENGCVRPDKFTFPFVLKACTRLCWVKM 131
Query: 133 TKMVHTQIVKSGFEQYPVVE-------------------------------TALVNSYSR 161
VH ++ + GFE V +AL Y+R
Sbjct: 132 GFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYAR 191
Query: 162 SGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAG 221
G ++G+AR+LFDEM +++VSW MI+GY + G++++A LFD +P RDV WN++IAG
Sbjct: 192 RG-ELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAG 250
Query: 222 CTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL 281
G A+ F M S P++VT++ LSA G L G+ IH + G
Sbjct: 251 YVLCGSNQQALEMFEEM---RSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGF 307
Query: 282 -DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFE 340
DL + NALIDMY KCGS+ A F +K +++WNS++ A HG +E SI +F
Sbjct: 308 RDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFT 367
Query: 341 EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL 400
EM + + IRPD +TF+ +L AC+H G VE+GR YF LM Y IEP I HYGC+VDLL
Sbjct: 368 EMRKLK---IRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLL 424
Query: 401 GRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI 460
GRAG EA + + MKIEP+ +VW +LL C+I+G + A +L+++ + G +
Sbjct: 425 GRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDYV 484
Query: 461 MLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPR 514
+L+NIY G+WD V KVRK++ D K GCS IE D + H L + P+
Sbjct: 485 LLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIEGDNKA-LMHFLFDSKPK 537
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/458 (38%), Positives = 282/458 (61%), Gaps = 11/458 (2%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F P+ +L+TA I AS AF LY ++ + PN+F + +LKSC
Sbjct: 86 LFHQTIDPDLFLFTAAINT-ASINGLKDQAFLLYVQLLS-SEINPNEFTFSSLLKSC--- 140
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
++ K++HT ++K G P V T LV+ Y++ G D+ A+K+FD M +R++VS TAM
Sbjct: 141 -STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAK-GGDVVSAQKVFDRMPERSLVSSTAM 198
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I+ Y + G+++ A +LFDSM +RD+ +WN +I G Q+G +DA+ F+++ E +
Sbjct: 199 ITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE--GKPK 256
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P+++T+V ALSA G L+ G+ IH +V + + L+ + LIDMY KCGSL+EA
Sbjct: 257 PDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLV 316
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F+ +K + +WN+MI +A+HG S++++ +F EM ++P +TFI L AC H
Sbjct: 317 FNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGIT--GLQPTDITFIGTLQACAHA 374
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GLV +G F+ M + Y I+P+IEHYGCLV LLGRAG+ + A E +K M ++ D V+W S
Sbjct: 375 GLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSS 434
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
+L CK++G + + LI ++ N G ++L+NIY +G ++ V KVR ++K++
Sbjct: 435 VLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGI 494
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PG S IE++ +VH+F + D+ H +++EIY L +
Sbjct: 495 VKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKI 532
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 133/278 (47%), Gaps = 42/278 (15%)
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
Y G I+++ +LF D D+ + + I + NGL A + ++ +S I PN
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQL---LSSEINPN 129
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+ T S++ + + GK+IH +V + GL +D +++ L+D+Y K G + A++ FD
Sbjct: 130 EFT----FSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFD 185
Query: 310 RNSKKRL-------------------------------TSWNSMINSFALHGQSENSICV 338
R ++ L SWN MI+ +A HG +++ +
Sbjct: 186 RMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALML 245
Query: 339 FEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVD 398
F++++ + +PD +T ++ L+AC+ G +E GR + + K+ RI ++ L+D
Sbjct: 246 FQKLL--AEGKPKPDEITVVAALSACSQIGALETGR-WIHVFVKSSRIRLNVKVCTGLID 302
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
+ + G EEA+ V D V W +++ G ++G
Sbjct: 303 MYSKCGSLEEAVLVFNDTP-RKDIVAWNAMIAGYAMHG 339
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 17/250 (6%)
Query: 55 CTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQ 114
C K N+ AR +FD + + + MI YA Q + A L++ ++ G+P+P++
Sbjct: 201 CYAKQGNVEAARALFDSMCERDIVSWNVMIDGYA-QHGFPNDALMLFQKLLAEGKPKPDE 259
Query: 115 FIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
L +C + + +H + S V T L++ YS+ G+ + A +F+
Sbjct: 260 ITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS-LEEAVLVFN 318
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM------PDRDVPAWNSVIAGCTQNGLF 228
+ +++V+W AMI+GY G ++A LF+ M D+ + + C GL
Sbjct: 319 DTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDI-TFIGTLQACAHAGLV 377
Query: 229 SDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS 288
++ I F MG E I+P C +S +G G L K + + +D DS +
Sbjct: 378 NEGIRIFESMGQEY--GIKPKIEHYGCLVSLLGRAGQL---KRAYETIKNMNMDADSVLW 432
Query: 289 NALIDMYGKC 298
++++ G C
Sbjct: 433 SSVL---GSC 439
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 180/471 (38%), Positives = 272/471 (57%), Gaps = 16/471 (3%)
Query: 52 VRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQ 111
++FC L A +FD +T P+ + ++IT Y Q + A + M++ +
Sbjct: 222 MQFCQFDL-----ALALFDQMTDPDIVSWNSIITGYCHQ-GYDIRALETFSFMLKSSSLK 275
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
P++F VL +C + + K +H IV++ + V AL++ Y++SG + +A +
Sbjct: 276 PDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGA-VEVAHR 334
Query: 172 LFD--EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
+ + NV+++T+++ GY ++GDI A ++FDS+ RDV AW ++I G QNGL S
Sbjct: 335 IVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLIS 394
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
DA+ FR M + + +PN TL LS I L GK +H R + N
Sbjct: 395 DALVLFRLM---IREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGN 451
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLT-SWNSMINSFALHGQSENSICVFEEMMRCQDH 348
ALI MY + GS+K+AR+ F+ R T +W SMI S A HG +I +FE+M+R
Sbjct: 452 ALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRI--- 508
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
N++PD +T++ +L+ACTH GLVEQG++YF LM + IEP HY C++DLLGRAG EE
Sbjct: 509 NLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEE 568
Query: 409 ALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGE 468
A ++ M IEPD V WGSLL+ C+++ D A+ A +KL+ IDPNN G + LAN
Sbjct: 569 AYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSA 628
Query: 469 LGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
GKW++ KVRK +KD+ K G SW+++ +VH F D HP+ + IY
Sbjct: 629 CGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIY 679
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 205/444 (46%), Gaps = 49/444 (11%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K NL AR +FD + P++ +T MI Y S+ + R MV G P QF +
Sbjct: 91 KAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLR-MVSSGI-SPTQFTF 148
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+VL SC K VH+ +VK G V +L+N Y++ G+ + +A+ +FD M
Sbjct: 149 TNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSV-MAKVVFDRMR 207
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
++ +W MIS + + A +LFD M D D+ +WNS+I G G A+ F
Sbjct: 208 LKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSF 267
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M S +++P++ TL LSA + L+LGK IH ++ R +D+ + NALI MY K
Sbjct: 268 MLK--SSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAK 325
Query: 298 CGSLK---------------------------------EARRAFDRNSKKRLTSWNSMIN 324
G+++ AR FD + + +W +MI
Sbjct: 326 SGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIV 385
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
+A +G +++ +F M+R +P+ T ++L+ + ++ G+ +L
Sbjct: 386 GYAQNGLISDALVLFRLMIR---EGPKPNNYTLAAVLSVISSLASLDHGK---QLHAVAI 439
Query: 385 RIE--PQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAE 442
R+E + L+ + R+G ++A ++ + D + W S++ +G + A
Sbjct: 440 RLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAI 499
Query: 443 FAVKKLIEID--PNNGGY-GIMLA 463
+K++ I+ P++ Y G++ A
Sbjct: 500 ELFEKMLRINLKPDHITYVGVLSA 523
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 188/412 (45%), Gaps = 44/412 (10%)
Query: 83 MITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVK 142
M+T + P+H+ + L + ++ P FI + +H +I+K
Sbjct: 1 MLTPTPNPPSHSDACVHLLQSAIKSRDP----FI----------------GRCIHARIIK 40
Query: 143 SGFEQYPVVETA-LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAA 201
G V T L+N Y ++G+ A +LFDEM + SW ++S + + G++ +A
Sbjct: 41 HGLRYLGVFLTNNLLNLYVKTGSS-SDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSAR 99
Query: 202 SLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIG 261
+FD +P D +W ++I G GLF A+ F RM VS I P Q T L++
Sbjct: 100 RVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRM---VSSGISPTQFTFTNVLASCA 156
Query: 262 HTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNS 321
L +GK +H +V + G ++N+L++MY KCG A+ FDR K ++WN+
Sbjct: 157 AAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNT 216
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
MI ++H Q C F+ + D PD V++ S++ H G + F M
Sbjct: 217 MI---SMHMQ----FCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFML 269
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK---IEPDEVVWGSLLNG-CKIYGR 437
K+ ++P G ++ A E+L++ K + + D + G++ N +Y +
Sbjct: 270 KSSSLKPDKFTLGSVLS----ACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAK 325
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANI---YGELGKWDEVRKVRKMLKDRN 486
+ E A +++EI I ++ Y ++G D R + LK R+
Sbjct: 326 SGAVEVA-HRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRD 376
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 192/479 (40%), Gaps = 111/479 (23%)
Query: 40 GQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFS 99
G N AF + K+ ++ AR IFD L + +TAMI YA Q S A
Sbjct: 340 GTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYA-QNGLISDALV 398
Query: 100 LYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSY 159
L+R M+R G P+PN + VL + K +H ++ V AL+ Y
Sbjct: 399 LFRLMIREG-PKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMY 457
Query: 160 SRSGNDIGIARKLFDEM-SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSV 218
SRSG+ I ARK+F+ + S R+ ++WT+M
Sbjct: 458 SRSGS-IKDARKIFNHICSYRDTLTWTSM------------------------------- 485
Query: 219 IAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR 278
I Q+GL ++AI F +M + N++P+ +T V LSA H G+++ GK + +
Sbjct: 486 ILSLAQHGLGNEAIELFEKM---LRINLKPDHITYVGVLSACTHVGLVEQGKSYFN-LMK 541
Query: 279 NGLDLDSFISN--ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSI 336
N +++ S+ +ID+ G+ G L+EA F RN
Sbjct: 542 NVHNIEPTSSHYACMIDLLGRAGLLEEAYN-FIRNMP----------------------- 577
Query: 337 CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE-HYGC 395
I PD V + SLL++C V+ + + K I+P Y
Sbjct: 578 -------------IEPDVVAWGSLLSSCRVHKYVDLAKVAAE---KLLLIDPNNSGAYLA 621
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVV-------WGSLLNGCKIYGRTDFAEFAVKKL 448
L + L G++E+A +V K MK D+ V W + N I+G D
Sbjct: 622 LANTLSACGKWEDAAKVRKSMK---DKAVKKEQGFSWVQIKNKVHIFGVED--------- 669
Query: 449 IEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHS 507
+ P M++ I+ E+ K + +L D EV +Q+ + HS
Sbjct: 670 -ALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQ---------EVKEQILRHHS 718
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 182/497 (36%), Positives = 288/497 (57%), Gaps = 15/497 (3%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
++++ F+ G N+ L+ +LSN+ A+ +FD +TT ++ + MI+ Y
Sbjct: 263 EKVRGFIVKTGMDLDNYVYNSLIDM-YYELSNVENAKKLFDEMTTRDSVSWNVMISGYV- 320
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKS-GFEQY 148
+ A + +R+M + G +P++ L +C + +H + K GF
Sbjct: 321 RCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTR 380
Query: 149 PVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP 208
++ AL++ Y++ G + IAR +FDEMS +NV+ WT+MISGY GD++ A LFD P
Sbjct: 381 --IDNALLDMYAKCGC-LNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSP 437
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
RDV W ++I G Q F DA++ FR M ++ ++P++ T+V L+ G L+
Sbjct: 438 VRDVVLWTAMINGYVQFHHFDDAVALFREMQIQ---RVKPDKFTVVTLLTGCAQLGALEQ 494
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
GK IHGY+ N + +D + ALI+MY KCG + ++ F K SW S+I A+
Sbjct: 495 GKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAM 554
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
+G++ ++ +F EM R +PD +TFI +L+AC+HGGLVE+GR +F M K +RIEP
Sbjct: 555 NGKTSEALRLFSEMERV---GAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEP 611
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV---WGSLLNGCKIYGRTDFAEFAV 445
++EHYGC++DLLGRAG +EA E+++ + IE E+V +G+LL+ C+I+ D E
Sbjct: 612 KVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLA 671
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
KKL I+ + +LANIY + +W++ +KVR+ +K+ K PGCS IEVD VH+F
Sbjct: 672 KKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEF 731
Query: 506 HSLDKTHPRTEEIYDAL 522
D +HP EI L
Sbjct: 732 LVGDPSHPEMMEICSML 748
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 217/473 (45%), Gaps = 74/473 (15%)
Query: 1 MVSVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT-LKL 59
+V V ++++ + + L C ++ LKQ+QS + +G KL+ FC L
Sbjct: 131 LVPVLLRISKLTKKSCIECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSL 190
Query: 60 SNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPH 119
NL YA IF+++ P+ ++Y M+ YA + L++ + R P+ F YP
Sbjct: 191 GNLRYAEKIFNYVQDPSLFVYNVMVKMYAKR-GILRKVLLLFQQL-REDGLWPDGFTYPF 248
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
VLK+ + + R + V IVK+G + V +L++ Y N + A+KLFDEM+ R
Sbjct: 249 VLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSN-VENAKKLFDEMTTR 307
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
+ VSW MISGY R C + F DAI+ FR M
Sbjct: 308 DSVSWNVMISGYVR----------------------------CRR---FEDAINTFREMQ 336
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK-- 297
E N +P++ T+V LSA L+LG IH YV R L + I NAL+DMY K
Sbjct: 337 QE--GNEKPDEATVVSTLSACTALKNLELGDEIHNYV-RKELGFTTRIDNALLDMYAKCG 393
Query: 298 -----------------------------CGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
CG L+EAR FD++ + + W +MIN +
Sbjct: 394 CLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQ 453
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
++++ +F EM Q ++PD T ++LL C G +EQG+ + + RI
Sbjct: 454 FHHFDDAVALFREM---QIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDEN-RITM 509
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+ L+++ + G +++LE+ ++ + D W S++ G + G+T A
Sbjct: 510 DVVVGTALIEMYSKCGCVDKSLEIFYELE-DKDTASWTSIICGLAMNGKTSEA 561
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 282/470 (60%), Gaps = 8/470 (1%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L +F ++ + + +MITA+ Q A L+++M + +PN
Sbjct: 183 KCGELGLGYRVFVNIPRRDVVSWNSMITAFV-QGGCPEEALELFQEMETQNV-KPNGITM 240
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
VL +C + + VH+ I ++ + + A+++ Y++ G+ + A++LFD+M
Sbjct: 241 VGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGS-VEDAKRLFDKMP 299
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
++++VSWT M+ GY ++G+ A +FD+MP++D+ AWN++I+ Q G +A+ F
Sbjct: 300 EKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHE 359
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
+ ++S +P++VTLV LSA G + LG IH Y+ + G+ L+ ++ +LIDMY K
Sbjct: 360 L--QLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCK 417
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG L++A F +K + W++MI A+HG +++I +F +M Q+ ++P+ VTF
Sbjct: 418 CGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKM---QEDKVKPNAVTF 474
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
++L AC+H GLVE+GR +F M Y + P ++HY C+VD+LGRAG EEA+E+++ M
Sbjct: 475 TNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMP 534
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+ P VWG+LL C I+ AE A +LIE++P N G ++L+NIY + GKWD V
Sbjct: 535 MAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSG 594
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+RK+++D K PGCS IEVD VH+F D +HP ++IY L+ +VA
Sbjct: 595 LRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVA 644
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 221/475 (46%), Gaps = 72/475 (15%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDH 71
N L+++++C+ LKQ+ + + G F A +L+ L +L YA+ +FD
Sbjct: 35 NHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQ 94
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ PN Y + +I AYAS ++ + ++ M+ + P++F +P ++K+ ++ E
Sbjct: 95 IPHPNLYTWNTLIRAYASS-SNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELF 153
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
K H ++K + +L++ Y++ G ++G+ ++F + R+VVSW +MI+ +
Sbjct: 154 TGKAFHGMVIKVLLGSDVFILNSLIHFYAKCG-ELGLGYRVFVNIPRRDVVSWNSMITAF 212
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
+ G + A LF M + N++PN +
Sbjct: 213 VQGGCPEEALELFQEME----------------------------------TQNVKPNGI 238
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
T+V LSA + G+ +H Y+ RN + +SNA++DMY KCGS+++A+R FD+
Sbjct: 239 TMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKM 298
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD------------------------ 347
+K + SW +M+ +A G+ + + +F+ M QD
Sbjct: 299 PEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPN-QDIAAWNALISAYEQCGKPKEALELF 357
Query: 348 HNI------RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG 401
H + +PD VT +S L+AC G ++ G + + K ++ L+D+
Sbjct: 358 HELQLSKTAKPDEVTLVSTLSACAQLGAMDLG-GWIHVYIKKQGMKLNCHLTTSLIDMYC 416
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI--YGRTDFAEFAVKKLIEIDPN 454
+ G ++AL V ++ D VW +++ G + +G+ A F+ + ++ PN
Sbjct: 417 KCGDLQKALMVFHSVE-RKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPN 470
>gi|225465641|ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Vitis vinifera]
Length = 539
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 188/521 (36%), Positives = 302/521 (57%), Gaps = 13/521 (2%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARF 67
N + NQ ++A+LE C ++ KQ+Q+F T G SQ + +A +L+ F + ++ ++
Sbjct: 8 NGSTNQTLIALLENCRSMSEFKQIQAFFITSGLSQHHPFASRLLSFSAISSWGDIDHSYR 67
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
IF + +P + ++I + S+ + + + S++ M+R G P+ YP + K+ +
Sbjct: 68 IFLQIPSPTISNWNSIIRGF-SKGKNPNPSVSVFVKMLRFGVC-PDHLTYPFIAKAVARL 125
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
E R VH +I K G + +L++ Y G DIG ARK+FDEM RN VSW AM
Sbjct: 126 SELRLALAVHCRIAKEGLWFDRFIANSLIHMYGSCG-DIGSARKVFDEMLIRNSVSWNAM 184
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
+ GY + GD+ +A +F+SMPDRDV +W+S+I GC + G + A++ F RM + +
Sbjct: 185 LDGYAKCGDLDSARQVFESMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVV---GPK 241
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
N+VT+V L A H G L+ G+ +H Y+ N + + +L+DMY KCG+++EA
Sbjct: 242 ANEVTMVSVLCACAHLGALEQGRTMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAIAV 301
Query: 308 FD--RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
F + + WN++I A HG S+ +F+EM Q I PD +T++ L +AC
Sbjct: 302 FRGVPMDQTDVLMWNTIIGGLATHGLVHESLELFKEM---QVLGIVPDEITYLCLFSACA 358
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
HGGLV + +FK + K + P+ EHY C+VD+L RAG+ EA + + M +EP +
Sbjct: 359 HGGLVHEAWHFFKSLGKQGMV-PKSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASML 417
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
G+LLNGC + R D AE +KLIE++P++ G I L+N+Y + WD R +R+ ++ R
Sbjct: 418 GALLNGCMNHRRFDLAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERR 477
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K+PG S++EV +H+F + DKTH E+IY L ++V
Sbjct: 478 GVKKSPGFSFVEVLGTLHRFIAHDKTHNDLEKIYMMLNTIV 518
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 185/512 (36%), Positives = 298/512 (58%), Gaps = 14/512 (2%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
+QV+ +L C+++ HL Q +F+ N ++ + L YA +F LT
Sbjct: 12 KQVIWLLNHCSNLKHLHQTHAFMLCRALDHDNLLLSLFIQSSS-SLGFSLYAYSLFTSLT 70
Query: 74 -TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
PN +LY +I A + P + S F R ++ + +P+ + +P LK+ + ++
Sbjct: 71 HPPNIFLYNTIIRALSLSPQPSLSIFLFNR--IQSARLRPDSYSFPFALKAVIRLSATKT 128
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD--EMSDRNVVSWTAMISG 190
H+Q ++ G + V +L+ YS S I ARKLFD ++ RNV W AM++
Sbjct: 129 GLQFHSQAIRFGLHSHLHVLVSLIRMYSSS--HISDARKLFDGIPLTARNVALWNAMLTS 186
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y ++ D+ NA LFDSMP R++ +W ++I+G AI+ FR M ++ N+ P++
Sbjct: 187 YAKICDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQLQ---NVVPDE 243
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
+TL+ LSA G L+LG+ I Y+ +GL + + NALIDMY K G++K A F+
Sbjct: 244 ITLLAVLSACAQLGALELGEWIRNYIDIHGLHRNVPLHNALIDMYAKSGNIKRALLIFES 303
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
K + +W +MI ALHG ++ +F M R + ++P+ +TFI++L+AC+H GLV
Sbjct: 304 MKHKTIVTWTTMIAGLALHGLGTQALEMFSRMERDR---VKPNEITFIAVLSACSHVGLV 360
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
+ R++F M Y I+P+IEHYGC++DLLGRAG +EA ++++ M EP+ +WGSLL
Sbjct: 361 QLARSFFTNMRSRYTIQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAIWGSLLA 420
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
+G E +K LIE++PNN G +L+NIY LG+W R VRKM++DR K
Sbjct: 421 ASYTHGDAMLGERTLKHLIELEPNNSGNYALLSNIYASLGRWKASRIVRKMMRDRGVKKI 480
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
PG S+IEV+ +V++F + + +HP+ +EIY+ +
Sbjct: 481 PGGSFIEVNNRVNEFIAGETSHPQFDEIYEVI 512
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 181/489 (37%), Positives = 290/489 (59%), Gaps = 11/489 (2%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS--NLTYARFIFD 70
+++ L +L++C I+ +KQ+Q+ LT G + + A K++ FC L + +L++A +F
Sbjct: 10 SKKTLFLLDKCRTISQIKQIQTHLTVSGTLKDPYAAAKIISFCALSSNQFSLSHAYRLFL 69
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
L +T+++ +I A+A + A L+++M+ PN + Y + K+C D+
Sbjct: 70 GLRHRSTFIWNTVIRAFA-EKNEPRKAIMLFKNMLY-SNFLPNNYTYSFLFKACTDLNNL 127
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
H Q +K G+E Y V+ LV+ ++ G + ARKLFD S+R+V++WTA+I+G
Sbjct: 128 YLGLACHCQSIKLGWEFYDFVQNGLVHMFAIFGC-MDSARKLFDLSSNRDVITWTALING 186
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y R G + LFD MP+R+ +W+++I G + G F +A+ F M + PN
Sbjct: 187 YVRAGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAM---LISGFWPNH 243
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
+VCA++A G L G+ IH Y+ RN +DLD + ALIDMY KCG ++ A F
Sbjct: 244 AGIVCAINACASLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYAKCGCIEIACSIFGE 303
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
+ + + +I+ A HGQS ++ +FE M + P+ VTF+S+LNAC+ GLV
Sbjct: 304 LRNRDVHVYTCLISGLANHGQSATAVELFERM---HSEGVVPNEVTFVSVLNACSRMGLV 360
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
++G F+ M+K Y EPQ++HYGCLVDLLGRAG+ EEA ++VK M ++PD V G+LLN
Sbjct: 361 DKGLRIFENMSKIYGDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVLGALLN 420
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
++YG + E V+ L ++ ++ G ++L+N+Y KWDEV +VR+ + D+ K
Sbjct: 421 ASRVYGDVELGEETVESLAQLSLDHSGVHVVLSNMYASANKWDEVARVRRGMGDKKVRKV 480
Query: 491 PGCSWIEVD 499
PGCS I+VD
Sbjct: 481 PGCSLIKVD 489
>gi|147818273|emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 178/490 (36%), Positives = 285/490 (58%), Gaps = 10/490 (2%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
K+L + L T G Q + KL+ T S+L +AR +FD + P+TYLY M YA+
Sbjct: 5 KRLHAHLITSGLHQQENHLRKLITLYTSSSSSLHHARLLFDAVYHPSTYLYNTMFRVYAA 64
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
P A L+R M R G P P+ + +P +LK+C + + +H Q +K G +
Sbjct: 65 SPT-PLHALLLHRHMFRHGPP-PDTYTFPFLLKACSALAHLLKGQELHCQALKFGLGGHV 122
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
VE +L++ Y S + + AR++FD M R++ SWT +++ Y ++ A +FD MP+
Sbjct: 123 FVENSLIHLYG-SNSRMDSARRVFDGMGYRDIASWTTLLACYANSCSVEAARKVFDEMPE 181
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
R V ++++++A + F +A+ FR + S I P+ ++ L A + G L +G
Sbjct: 182 RSVVSYSAMLAAYVRGNRFREALELFREL---FSVKIEPSDSCVMSVLCACANLGALDVG 238
Query: 270 KVIHGYV-YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
+ ++ +V + G +DS I+ ALIDM+ KCGS++ A F+ +K + W +M++ A+
Sbjct: 239 RWVYSFVCHSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAM 298
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
HG E I FE+M+ D I+PD VTF++LL+ C+H GLV +G YF M + +EP
Sbjct: 299 HGLGEQLIEAFEKMV---DSGIKPDEVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEP 355
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL 448
+EH+GC+VDLLGRAG ++A++++ M EP+ +WG+LLN C++Y + E A + L
Sbjct: 356 TVEHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGALLNACRVYKNVEVGELAAQWL 415
Query: 449 IEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSL 508
I+ +P NG + L ++Y E G+WDEV KV+ +K+ K PGCS IEV ++F
Sbjct: 416 IKDEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFVVG 475
Query: 509 DKTHPRTEEI 518
DK+HP EI
Sbjct: 476 DKSHPCAVEI 485
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 178/562 (31%), Positives = 304/562 (54%), Gaps = 43/562 (7%)
Query: 1 MVSVTNQLNQTLNQQVLAILER----CNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT 56
+++ TNQ + +N + R C ++ L Q+ F G +++ KL+ C
Sbjct: 156 VITQTNQRRRRMNALFAWKITRKDQYCKNLRALTQIHGFFIKSGVDTDSYFIGKLILHCA 215
Query: 57 LKLSN-LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQF 115
+ +S+ L YAR + P+ +++ ++ Y S+ ++ +++ +M+R+G P+ F
Sbjct: 216 ISISDALPYARRLLLCFPEPDAFMFNTLVRGY-SESDEPHNSVAVFVEMMRKGFIFPDSF 274
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSG------------ 163
+ V+K+ + R +H Q +K G + + V T L+ Y G
Sbjct: 275 SFAFVVKAAANFRSLRTGFQMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEM 334
Query: 164 ------------------NDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
ND+ AR++FD+M RN SW M++GY + G+++ A +F
Sbjct: 335 PQPNLVAWNAVVTACFRGNDVSGAREIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFS 394
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
MP RD +W+++I G + NG F+++ S+FR + + +RPN+V+L LSA +G
Sbjct: 395 EMPHRDDVSWSTMIVGFSHNGSFNESFSYFREL---LRAEMRPNEVSLTGVLSACSQSGA 451
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR-LTSWNSMIN 324
+ GK +HG+V ++G ++NALIDMY +CG++ AR F+ +KR + SW SMI
Sbjct: 452 FEFGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIA 511
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
A+HG E +I +F EM + + PD ++FISLL AC+H GL+++G YF M + Y
Sbjct: 512 GLAMHGHGEEAIRIFNEM---TESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVY 568
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
IEP +EHYGC+VDL GR+G+ ++A + M I P +VW +LL C +G + AE
Sbjct: 569 HIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAIVWRTLLGACSSHGNIELAEQV 628
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
++L E+DPNN G ++L+N+Y GKW +V +RK + + K S +EV K +++
Sbjct: 629 KQRLNELDPNNSGDLVLLSNVYATAGKWKDVASIRKSMIVQRIKKITAWSLVEVGKTMYK 688
Query: 505 FHSLDKTHPRTEEIYDALESMV 526
F + +K E ++ L+ ++
Sbjct: 689 FTACEKKKEIDIEAHEKLKEII 710
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 180/485 (37%), Positives = 278/485 (57%), Gaps = 17/485 (3%)
Query: 47 YAFKLVRFCTLKLSNLTYARFIFDH--LTTPNTYLYTAMITAYASQPAHASSAFSLYRDM 104
Y +V +C + N+ A+ +FD L +T + +MI+ YA A S++RD+
Sbjct: 211 YNTMIVGYC--ENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLF-DEALSMFRDL 267
Query: 105 VRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN 164
+ + + F VL +C D+ R K VH Q V G V ALV YS+
Sbjct: 268 LMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKC-E 326
Query: 165 DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP----DRDVPAWNSVIA 220
D+ A+ FD +++R+ +W +ISGY ++N +L M + +V WN +I+
Sbjct: 327 DLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIIS 386
Query: 221 GCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG 280
G +NG A+ F M + ++RP+ T+ L A + GK +H + R G
Sbjct: 387 GHVENGHNELALRLFTEMQ---TSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQG 443
Query: 281 LDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFE 340
+LD I AL+DMY KCGS+K A + ++R S L S N+M+ ++A+HG + I +F
Sbjct: 444 YELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFR 503
Query: 341 EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL 400
M+ + RPD VTF+S+L++C H G VE G +F LMT Y + P ++HY C+VDLL
Sbjct: 504 NML---GNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMT-YYNVTPSLKHYTCIVDLL 559
Query: 401 GRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI 460
RAGR +EA E+VK + +PD V+WG+LL GC I+G + E A + LIE++PNN G +
Sbjct: 560 SRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYV 619
Query: 461 MLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYD 520
+LAN+Y G+W ++ + R+M+KDR +K+PGCSWIE + +H F S DK+H +TE+IY
Sbjct: 620 LLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKTEDIYT 679
Query: 521 ALESM 525
L+++
Sbjct: 680 TLDNL 684
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 204/464 (43%), Gaps = 76/464 (16%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLV----RFCTLKLSNLTYARFIFDHLT 73
++LE C +N KQ+ + G F KL+ RF L +NL + + +
Sbjct: 67 SLLESCRTLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVK-----MP 121
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
N Y +TA+++ + + A SL+ + + F++P VLK C +
Sbjct: 122 QRNLYSWTAILSVHVDH-GYFEEALSLFEKL-QLDDIGLEFFVFPVVLKLCGGLRVLELG 179
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+ +H ++K D+G A K+F S +NVVS+ MI GY
Sbjct: 180 RQLHGVVIKRC-------------------ADMGSALKIFSGFSVKNVVSYNTMIVGYCE 220
Query: 194 VGDIKNAASLFDSMP--DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
G+++ A LFD M +D +WNS+I+G N LF +A+S FR + ME + I +
Sbjct: 221 NGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLME--EGIEADSF 278
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
TL L+A L+ GK +H GL ++F+ AL++MY KC LK A+ AFD
Sbjct: 279 TLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGV 338
Query: 312 SKKRLTSWNSMINSFALHGQSEN-----------------------------------SI 336
+++ +WN +I+ +A Q EN ++
Sbjct: 339 TERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELAL 398
Query: 337 CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR-AYFKLMTKTYRIEPQIEHYGC 395
+F EM Q ++RPD T +L AC + +G+ + + + Y ++ I
Sbjct: 399 RLFTEM---QTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIG--AA 453
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
LVD+ + G + A++V + P+ V ++L ++G D
Sbjct: 454 LVDMYAKCGSIKHAMQVYNRIS-NPNLVSQNAMLTAYAMHGHGD 496
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 178/464 (38%), Positives = 279/464 (60%), Gaps = 16/464 (3%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYA 88
LKQL + L ++ ++ C S+ +YA+ IF L + + ++A
Sbjct: 31 LKQLHAHLLKTNSPLSSLPLSRVASVCAFN-SSFSYAKLIFQLLDASEVTHWNTCLRSFA 89
Query: 89 S--QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFE 146
PA A S F YR +R P+ + VLK+C +L+ R K+VH + K G +
Sbjct: 90 EGDSPADAISLF--YR--LREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQ 145
Query: 147 QYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDS 206
++ +V+ Y+ G +IG+ARK+FD+M R+V++W MI+ ++GD + A LF
Sbjct: 146 SNMFLQNMIVHLYALCG-EIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAE 204
Query: 207 MPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD-NIRPNQVTLVCALSAIGHTGM 265
MP+R+V +W S+I G Q G +AI F +E+ D + PN+VT+V L A G
Sbjct: 205 MPERNVRSWTSMIGGYAQCGKSKEAIDLF----LEMEDAGLLPNEVTVVAVLVACADMGN 260
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L LG+ IH + R+G + + + N LIDMY KCG L++A R FD ++ + SW++MI
Sbjct: 261 LVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAG 320
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
A HG++E+++ +F +M+ + ++P+ VTFI +L+AC+H G+VE+GR YF MT+ Y
Sbjct: 321 LAAHGRAEDALALFNKMI---NTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYG 377
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
I P+IEHYGC+VDL RAG +EA E + M I P+ VVWG+LL GCK++ AE A
Sbjct: 378 IVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNVKLAEEAT 437
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
+ L ++DP N GY ++L+NIY E G+W++V +VRK+++DR ++
Sbjct: 438 RHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGTWE 481
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 182/516 (35%), Positives = 289/516 (56%), Gaps = 35/516 (6%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
L +Q ++ L RC+ +N +KQ+ + + + +F KL+ +L +T A +F+
Sbjct: 16 LLEQKISDLHRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSL-CRQMTLAVNVFNQ 74
Query: 72 LTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
+ P+ LY +I A+ S+P AFS++ +M G N F YP +LK+C +
Sbjct: 75 IQDPDVLLYNTLIRAHVRNSEPL---LAFSVFFEMQDSGVCADN-FTYPFLLKACSGKVW 130
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
R +M+H Q+ K GF V +L++SY + G ++G AR+LFDEM +R+ VSW ++
Sbjct: 131 VRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKLG-ELGEARRLFDEMPERDTVSWNTILD 189
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GY + G++ A LF+ MP R+V +W+++ AG F D
Sbjct: 190 GYVKAGEMNAAFELFEKMPARNVVSWSTMEAGLK----FDDG------------------ 227
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
T++ LSA +G+L LGK +H + R + +SNALIDMY KCGSL+ A F
Sbjct: 228 --TVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFH 285
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
+K + SWN++I A+HG E ++ +F M + PD VTF+ +L ACTH G
Sbjct: 286 GMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRM---KGEGFVPDKVTFVGVLCACTHAGF 342
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
V++G YF M + Y + P++EHYGC+VDLLGR GR +EA +V M +EP+ ++WG+LL
Sbjct: 343 VDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLL 402
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
C+++ T AE +L++ + ++ G ML+NIY G WD +R +K + K
Sbjct: 403 GACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQK 462
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
G S IEVD +VH+F D++HP+++ IY ++ +
Sbjct: 463 PSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTIDGL 498
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/509 (34%), Positives = 289/509 (56%), Gaps = 14/509 (2%)
Query: 8 LNQTLNQQVLAILERCNHINHLKQLQSFLT---TLGQSQTNFYAFKLVRFCTLKL-SNLT 63
L+ TL + ++E+C ++ LK+ + + TL + +L+ C+ + +
Sbjct: 13 LSLTLRNTLSRLIEQCKNLRELKKTHTQILKSPTLHTGDQYYLITRLLYVCSFSYYGSFS 72
Query: 64 YARFIFDHLTTPNTYLYTAMITAYASQPA----HASSAFSLYRDMVRRGQPQPNQFIYPH 119
YA +F + P+ Y MI AY S + H A LY+ M + PN +P
Sbjct: 73 YATNVFHMIKNPDLRAYNIMIRAYISMESGDDTHFCKALMLYKQMFCK-DIVPNCLTFPF 131
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
+LK C L+ + +HTQ++K GF + V +L++ Y +G + ARK+FDEM
Sbjct: 132 LLKGCTQWLDGATGQAIHTQVIKFGFLKDVYVANSLISLY-MAGGLLSNARKVFDEMLVT 190
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
+VV+W +M+ G R G + A LF M R++ WNS+I G Q G +++ F M
Sbjct: 191 DVVTWNSMVIGCLRNGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEMQ 250
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
+ D ++P+++T+ LSA G + GK +HGY+ RNG++ D I AL++MYGKCG
Sbjct: 251 ILSDDMVKPDKITIASVLSACAQLGAIDHGKWVHGYLRRNGIECDVVIGTALVNMYGKCG 310
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
+++A F+ +K ++W MI+ FALHG + F EM + ++P+ VTF+
Sbjct: 311 DVQKAFEIFEEMPEKDASAWTVMISVFALHGLGWKAFNCFLEM---EKAGVKPNHVTFVG 367
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
LL+AC H GLVEQGR F +M + Y IEPQ+ HY C+VD+L RA F+E+ +++ M ++
Sbjct: 368 LLSACAHSGLVEQGRWCFDVMKRVYSIEPQVYHYACMVDILSRARLFDESEILIRSMPMK 427
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVR 479
PD VWG+LL GC+++G + E V LI+++P+N + + +IY + G +D +++R
Sbjct: 428 PDVYVWGALLGGCQMHGNVELGEKVVHHLIDLEPHNHAFYVNWCDIYAKAGMFDAAKRIR 487
Query: 480 KMLKD-RNAYKTPGCSWIEVDKQVHQFHS 507
++K+ R K PGCS IE++ +V +F +
Sbjct: 488 NIMKEKRIEKKIPGCSMIEINGEVQEFSA 516
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 191/506 (37%), Positives = 302/506 (59%), Gaps = 23/506 (4%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRF----CTLKLSNLTYARFI 68
+Q +L C +++HL+Q Q F+ T G Q + L RF +L LS+ Y+ FI
Sbjct: 30 SQHAEQLLCHCTNLSHLQQTQGFMLTRGLDQDDIL---LARFIYTSASLGLSSYAYSVFI 86
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
+H P+ + Y +I A +S ++ + A SL+ + G P P+ + +P VLK+ +
Sbjct: 87 SNH--RPSIFFYNNVIWALSS--SNPTRAISLFNAIRLLGMP-PDSYSFPFVLKAVVCLS 141
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
K +H Q + SG + +P V T+LV YS + + ARKLFD + ++ W AM+
Sbjct: 142 AVHVGKQIHCQAIVSGLDSHPSVVTSLVQMYSSCAH-LSSARKLFDGATFKHAPLWNAML 200
Query: 189 SGYTRVGDIKNAASLFDSMP--DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
+GY +VG++ NA +LF+ MP DRDV +W ++I+G TQ ++AI+ FR M ++ N+
Sbjct: 201 AGYAKVGNMSNARNLFECMPEKDRDVVSWTTLISGYTQTHSPNEAITLFRIMLLQ---NV 257
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYV--YRNGLDLDSFISNALIDMYGKCGSLKEA 304
+P+++ ++ LSA G LQLG+ IH Y+ + N L + N+LIDMY K G + +A
Sbjct: 258 QPDEIAILAVLSACADLGALQLGEWIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISKA 317
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R+ F K + +W ++I+ ALHG + ++ VF M + + ++P+ VT I++L+AC
Sbjct: 318 RQLFQNMKHKTIITWTTVISGLALHGFGKEALDVFSCMEKAR---VKPNEVTLIAVLSAC 374
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLVE GR F M Y IEP+IEHYGC++DLLGRAG +EA+E+V+ M E + V
Sbjct: 375 SHVGLVELGRNIFTSMRSKYGIEPKIEHYGCMIDLLGRAGYLQEAMELVRVMPSEANAAV 434
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WGSLL+ YG A A++ L ++P+N G +L+N Y LG W E VRK+++D
Sbjct: 435 WGSLLSASNRYGDAALAAEALRHLSVLEPHNCGNYSLLSNTYAALGWWKEAAMVRKVMRD 494
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDK 510
A K PG S++E++ +V++F + DK
Sbjct: 495 TCAEKVPGVSFVELNNRVYEFIAGDK 520
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 177/461 (38%), Positives = 273/461 (59%), Gaps = 9/461 (1%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L AR +FD + + ++I Y + A AF LY M P++ V+
Sbjct: 206 LLAARKLFDESCVRDLVSWNSIINGYV-RCGLADEAFDLYYKMGEL-NVMPDEVTMIGVV 263
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+ + + +H I + G + AL++ Y + N I A+ LF+ M+ + V
Sbjct: 264 SASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKN-IEAAKILFENMTKKTV 322
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
VSWT M+ GY + G +++A LF+ MP++DV WN++I G Q +A++ F M
Sbjct: 323 VSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQ-- 380
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+ ++ P+++T+V LSA G L +G +H YV ++ L ++ + AL+DMY KCG++
Sbjct: 381 -ASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNI 439
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
K+A + F+ + +W ++I ALHGQ +I F EM+ + PD +TFI +L
Sbjct: 440 KKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISI---GLVPDEITFIGVL 496
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
+AC HGGLV+QGR YF MT Y I P+++HY CLVDLLGRAG EEA E+++ M EPD
Sbjct: 497 SACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPD 556
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
VVWG+L G +I+G E A KL+E+DP++GG ++LAN+YG+ W++ RKVRKM
Sbjct: 557 AVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKM 616
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+++R KTPGCS IE++ V+ F DK+HP++E+IY+ L
Sbjct: 617 MEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECL 657
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 213/465 (45%), Gaps = 67/465 (14%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL-KLSNLTYARFIFDHLTT 74
+L++LE C + +K++ + + + G F +LV FC + + NL Y I ++
Sbjct: 57 LLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAAN 116
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
N + + I Y + + +A LYR+M+R+G P+ + YP + K C S
Sbjct: 117 LNXFSWNMAIRGYV-ESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTAN 175
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+ +++ GF+ V A+++ G ++ ARKLFDE R++VSW ++I+GY R
Sbjct: 176 EILGHVIQLGFDSDLFVHNAIIHVLVSCG-ELLAARKLFDESCVRDLVSWNSIINGYVRC 234
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
GL +A + +MG N+ P++VT++
Sbjct: 235 -------------------------------GLADEAFDLYYKMG---ELNVMPDEVTMI 260
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
+SA L LG+ +H + GL+L ++NAL+DMY KC +++ A+ F+ +KK
Sbjct: 261 GVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKK 320
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEM----------------------------MRCQ 346
+ SW +M+ +A G E+++ +F EM Q
Sbjct: 321 TVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQ 380
Query: 347 DHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRF 406
++ PD +T ++ L+AC+ G ++ G + + + + LVD+ + G
Sbjct: 381 ASSVAPDKITVVNCLSACSQLGALDVG-IWMHHYVDKHNLTMNVALGTALVDMYAKCGNI 439
Query: 407 EEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
++A++V + M + + W +++ G ++G+ A ++I I
Sbjct: 440 KKAIQVFEEMPGR-NSLTWTAIICGLALHGQPHAAISYFSEMISI 483
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 177/461 (38%), Positives = 273/461 (59%), Gaps = 9/461 (1%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L AR +FD + + ++I Y + A AF LY M P++ V+
Sbjct: 206 LLAARKLFDESCVRDLVSWNSIINGYV-RCGLADEAFDLYYKMGEL-NVMPDEVTMIGVV 263
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+ + + +H I + G + AL++ Y + N I A+ LF+ M+ + V
Sbjct: 264 SASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKN-IEAAKILFENMTKKTV 322
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
VSWT M+ GY + G +++A LF+ MP++DV WN++I G Q +A++ F M
Sbjct: 323 VSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQ-- 380
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+ ++ P+++T+V LSA G L +G +H YV ++ L ++ + AL+DMY KCG++
Sbjct: 381 -ASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNI 439
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
K+A + F+ + +W ++I ALHGQ +I F EM+ + PD +TFI +L
Sbjct: 440 KKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISI---GLVPDEITFIGVL 496
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
+AC HGGLV+QGR YF MT Y I P+++HY CLVDLLGRAG EEA E+++ M EPD
Sbjct: 497 SACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPD 556
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
VVWG+L G +I+G E A KL+E+DP++GG ++LAN+YG+ W++ RKVRKM
Sbjct: 557 AVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKM 616
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+++R KTPGCS IE++ V+ F DK+HP++E+IY+ L
Sbjct: 617 MEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECL 657
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 213/465 (45%), Gaps = 67/465 (14%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL-KLSNLTYARFIFDHLTT 74
+L++LE C + +K++ + + + G F +LV FC + + NL Y I ++
Sbjct: 57 LLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAAN 116
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
N + + I Y + + +A LYR+M+R+G P+ + YP + K C S
Sbjct: 117 LNVFSWNMAIRGYV-ESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTAN 175
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+ +++ GF+ V A+++ G ++ ARKLFDE R++VSW ++I+GY R
Sbjct: 176 EILGHVIQLGFDSDLFVHNAIIHVLVSCG-ELLAARKLFDESCVRDLVSWNSIINGYVRC 234
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
GL +A + +MG N+ P++VT++
Sbjct: 235 -------------------------------GLADEAFDLYYKMG---ELNVMPDEVTMI 260
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
+SA L LG+ +H + GL+L ++NAL+DMY KC +++ A+ F+ +KK
Sbjct: 261 GVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKK 320
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEM----------------------------MRCQ 346
+ SW +M+ +A G E+++ +F EM Q
Sbjct: 321 TVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQ 380
Query: 347 DHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRF 406
++ PD +T ++ L+AC+ G ++ G + + + + LVD+ + G
Sbjct: 381 ASSVAPDKITVVNCLSACSQLGALDVG-IWMHHYVDKHNLTMNVALGTALVDMYAKCGNI 439
Query: 407 EEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
++A++V + M + + W +++ G ++G+ A ++I I
Sbjct: 440 KKAIQVFEEMPGR-NSLTWTAIICGLALHGQPHAAISYFSEMISI 483
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/543 (34%), Positives = 297/543 (54%), Gaps = 40/543 (7%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARFIFDHLTTP 75
LA+ +C + +KQ+Q+ + + + KL+ C + L + L YAR +F + P
Sbjct: 9 LALFSKCKSLRTVKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIRNP 68
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ ++Y +I S S+A L+ +M R+ P+ F + +LK+ +
Sbjct: 69 DVFMYNTLIRGL-SDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQ 127
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA--------- 186
+H V G + + V T L++ Y+ + ARK+FDEM + N+V+W A
Sbjct: 128 LHCLAVGYGLDSHLFVGTTLISMYAECACLV-FARKVFDEMIEPNIVAWNAIVAACFRCE 186
Query: 187 ----------------------MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQ 224
M++GYT+ G+++ A +F MP +D +W+++I G
Sbjct: 187 GVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAH 246
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
NG F+DA +FFR + E +RPN+V+L LSA G + G+++HG+V ++G
Sbjct: 247 NGNFNDAFAFFREVRRE---GMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQI 303
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
++NALID Y KCG+L AR FD ++ SW +MI A+HG E +I +F EM
Sbjct: 304 ISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEM-- 361
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
++ NI+PD +TFIS+L AC+H GLV+ G +YF M TY IEP IEHYGC+VDL GRAG
Sbjct: 362 -EESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAG 420
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLAN 464
+ ++A + V M I P+++VW +LL C I+G A ++L E+DP N G ++L+N
Sbjct: 421 KLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSN 480
Query: 465 IYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALES 524
IY GKW +V +R+ + + KTPG S IEV++ ++ F + +K + E + L
Sbjct: 481 IYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQKLRE 540
Query: 525 MVA 527
+++
Sbjct: 541 IMS 543
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 188/512 (36%), Positives = 294/512 (57%), Gaps = 10/512 (1%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
V L N + Q+ + + G T K+V F ++ + +F+ + P
Sbjct: 76 VFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASS-GDIDSSVSVFNGIGEP 134
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
++ L+ +MI AYA + A + Y M G + F +P VLKS ++L K
Sbjct: 135 SSLLFNSMIRAYA-RYGFAERTVATYFSMHSWGF-TGDYFTFPFVLKSSVELLSVWMGKC 192
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
VH I++ G + V T+L+ Y + G +I A K+FD M+ R+V SW A+++GYT+ G
Sbjct: 193 VHGLILRIGLQFDLYVATSLIILYGKCG-EINDAGKVFDNMTIRDVSSWNALLAGYTKSG 251
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
I A ++F+ MP R++ +W ++I+G +Q+GL A+S F M E S +RPN VT++
Sbjct: 252 CIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDS-GVRPNWVTIMS 310
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR--NSK 313
L A L+ G+ IH R GL+ ++ + AL MY KCGSL +AR FD+ ++
Sbjct: 311 VLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNE 370
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K L +WN+MI ++A +G ++ F EM++ I+PD +TF LL+ C+H GLV+ G
Sbjct: 371 KNLIAWNTMITAYASYGHGLQAVSTFREMIQA---GIQPDDITFTGLLSGCSHSGLVDVG 427
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
YF M+ TY I P++EHY C+ DLLGRAGR EA ++V M + +WGSLL C+
Sbjct: 428 LKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACR 487
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
+ + AE A +KL ++P N G ++L+N+Y E G+W EV K+R ++K + K+PGC
Sbjct: 488 KHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGC 547
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
SWIE++ + H F D +HP+ +EIY LE++
Sbjct: 548 SWIEINGKAHMFLGGDTSHPQGKEIYMFLEAL 579
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 180/475 (37%), Positives = 284/475 (59%), Gaps = 17/475 (3%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K ++ A +F + N + ++IT Y Q AS A ++ M+ G +P++
Sbjct: 194 KCGSVACAEEVFSGMIERNLVTWNSLITCY-EQNGPASEALEVFVRMMDSGL-EPDEVTL 251
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSG-FEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
V+ +C + + +H ++VK+ F V+ ALV+ Y++ + + AR++FD M
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKC-SKVNEARRVFDRM 310
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
S RNVVS T+M+SGY R +K A +F M R+V +WN++IAG TQNG +A+ FR
Sbjct: 311 SIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFR 370
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH------GYVYRNGLDLDSFISNA 290
+ E +I P T LSA + L LG+ H G+ +++G + D F+ N+
Sbjct: 371 LLKRE---SIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNS 427
Query: 291 LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
LIDMY KCGS+++ R F++ ++ SWN++I +A +G ++ +F +M+ C +
Sbjct: 428 LIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGE--- 484
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
+PD VT I +L AC+H GLVE+GR YF M + + + P +HY C+VDLLGRAG EA
Sbjct: 485 KPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAK 543
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELG 470
+++ M + PD VVWGSLL CK++G + + A +KL+EIDP N G ++L+N+Y ELG
Sbjct: 544 NLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELG 603
Query: 471 KWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+W +V +VRK+++ + K PGCSWIEV+ +VH F DK+HP ++IY L+ +
Sbjct: 604 RWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKML 658
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 192/379 (50%), Gaps = 11/379 (2%)
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
PN + +L SC +RGT++VH +I+ + F ++ L++ Y + + + ARK
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKC-DCLDDARK 71
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
LFD M RN +W ++IS T+ G + AA LF SMP+ D +WNS+++G Q+ F ++
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
+ +F +M E + N+ + ALSA L +G +H V ++ D ++ +AL
Sbjct: 132 LEYFVKMHRE---DFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSAL 188
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIR 351
IDMY KCGS+ A F ++ L +WNS+I + +G + ++ VF MM D +
Sbjct: 189 IDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMM---DSGLE 245
Query: 352 PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALE 411
PD VT S+++AC +++G + KT + + LVD+ + + EA
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305
Query: 412 VVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGK 471
V M I + V S+++G A F K+ + N + ++A Y + G+
Sbjct: 306 VFDRMSIR-NVVSETSMVSGYARAASVKAARFMFSKMTQ--RNVVSWNALIAG-YTQNGE 361
Query: 472 WDEVRKVRKMLKDRNAYKT 490
+E ++ ++LK + + T
Sbjct: 362 NEEALRLFRLLKRESIWPT 380
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
V D PN L + + + +++H + ++ FI N LID+YGKC L
Sbjct: 7 VRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCL 66
Query: 302 KEARRAFDRNSKK----------------------RL---------TSWNSMINSFALHG 330
+AR+ FDR ++ RL SWNSM++ FA H
Sbjct: 67 DDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHD 126
Query: 331 QSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQI 390
+ E S+ F +M R + + +F S L+AC + G L++K+ R +
Sbjct: 127 RFEESLEYFVKMHR---EDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKS-RYSTDV 182
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
L+D+ + G A EV GM IE + V W SL+
Sbjct: 183 YMGSALIDMYSKCGSVACAEEVFSGM-IERNLVTWNSLI 220
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/514 (35%), Positives = 287/514 (55%), Gaps = 42/514 (8%)
Query: 15 QVLAILERCNHINHLKQLQSFLTT--LGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDH 71
++ ++ +C + L+Q+ + L T + S +F K++ FC L ++ YAR +F
Sbjct: 59 RIALLIRKCRSMRVLRQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQ 118
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ PN + + +MI + + L+R MVRRG P PN F VLK+C V
Sbjct: 119 IQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALE 178
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
+ VH ++KSGF P VETALVN Y++ DI +A K+FDE++DRN+V+W+ MISGY
Sbjct: 179 EGQQVHANVLKSGFGSSPFVETALVNFYAKC-EDIVLASKVFDEITDRNLVAWSTMISGY 237
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
R+ GL ++A+ FR M + P++V
Sbjct: 238 ARI-------------------------------GLVNEALGLFRDMQ---KAGVVPDEV 263
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
T+V +SA +G L GK +H Y+ + ++ D +S AL++MY KCG ++ A+ FD
Sbjct: 264 TMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAM 323
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K +W+SMI A++G +E+++ EE R ++ ++P+ VTFI +L+AC H GLV
Sbjct: 324 PVKDTKAWSSMIVGLAINGLAEDAL---EEFFRMEEAKVKPNHVTFIGVLSACAHSGLVS 380
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+GR Y+ M + + I P +E YGC+VDLL RA E+A +V+ M I P+ V+W +LL G
Sbjct: 381 EGRRYWSSMLE-FGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVG 439
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
CK D +E ++L+E++P+N I+L+N+Y + +W+++ +VRK +K P
Sbjct: 440 CKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVP 499
Query: 492 GCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
GCS IEVD VH+F D +HP E+ + L +
Sbjct: 500 GCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDI 533
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/494 (36%), Positives = 285/494 (57%), Gaps = 20/494 (4%)
Query: 33 QSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPA 92
QS L +G + +FYA +L +AR +FD + + +T ++ YA +
Sbjct: 174 QSVL--VGNALVHFYA---------NHRSLAHARNLFDEMPDRDVVSWTTLVDGYARR-G 221
Query: 93 HASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVE 152
A A+ ++ MV G QPN+ V+ + + +MV+ + G + +E
Sbjct: 222 LADEAWRVFCRMVVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLE 281
Query: 153 TALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDV 212
AL++ + + G AR++FD M+ ++V SWT M++ Y + GD+++AA LFD MP R+
Sbjct: 282 NALIDMFGKFGCAAS-AREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNA 340
Query: 213 PAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVI 272
+W+ +IA +Q +A+ F+ M + + + P LV LSA G L LG+ I
Sbjct: 341 VSWSCMIAAYSQANQPEEAVRLFKAM---IEEGVEPINAGLVSVLSACAQLGCLDLGRWI 397
Query: 273 H-GYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
+ YV L + NA ID+Y KCG A + F +++ + SWNSMI + A+HGQ
Sbjct: 398 YDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQ 457
Query: 332 SENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE 391
SE + +FE++ + I PD +TF+ LL+AC+H GLV +GR YFK M Y IEP+ E
Sbjct: 458 SEEVLRLFEQL---KGTCIVPDEITFLGLLSACSHSGLVSEGRRYFKEMKLIYGIEPKSE 514
Query: 392 HYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
HY C++DLLG+ G EEA EV KGM +E DE WG+LLN C++YG + EFA KL+++
Sbjct: 515 HYACMIDLLGKIGLLEEAFEVAKGMPMETDEAGWGALLNACRMYGNVEIGEFAADKLVQL 574
Query: 452 DPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKT 511
+P + G ++++ IY KWD+V+ +R ++++R K PGCS IEVD + H+F D +
Sbjct: 575 NPLDSGIYVLMSQIYASKNKWDQVKILRVLMRERGVKKNPGCSSIEVDGKFHEFLVADVS 634
Query: 512 HPRTEEIYDALESM 525
H +E+IY AL+++
Sbjct: 635 HVHSEDIYAALKNI 648
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/468 (36%), Positives = 280/468 (59%), Gaps = 9/468 (1%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K N+ A +F+ + + ++A+I+ Y Q A L+++M G ++ +
Sbjct: 235 KKGNVEEACKLFNEMKQKDLVSWSALISCY-EQNEMYEEALILFKEMNANG-IMVDEVVV 292
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
VL +C +L K+VH +VK G E Y ++ AL++ YS S ++ A+KLF E
Sbjct: 293 LSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYS-SCEEVVTAQKLFSESC 351
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+ +SW +MISGY + G+I+ A +LFDSMPD+D +W+++I+G Q F++ + F+
Sbjct: 352 CLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQE 411
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M +E +P++ LV +SA H L GK IH Y+ +NGL ++ + LI+MY K
Sbjct: 412 MQIE---GTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMK 468
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
G +++A F +K +++WN++I A++G + S+ F EM ++H + P+ +TF
Sbjct: 469 LGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEM---KEHGVTPNEITF 525
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+++L AC H GLV++G +F M + ++I P I+HYGC+VDLLGRAG +EA E+++ M
Sbjct: 526 VAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMP 585
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+ PD WG+LL CK YG + E +KL+E+ P++ G+ ++L+NIY G W +V +
Sbjct: 586 MAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLE 645
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
VR M++ KTPGCS IE +VH+F + DKTHP+ E I L+ M
Sbjct: 646 VRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEM 693
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/516 (26%), Positives = 239/516 (46%), Gaps = 77/516 (14%)
Query: 5 TNQLNQTLNQQVLAI-LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT-LKLSNL 62
T L TL +L L++C +I Q+ S + G + +F A +L++F T L N+
Sbjct: 17 TFTLKPTLTLPILETHLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFINI 76
Query: 63 TYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
+ IF H+ PN ++ M+ Y Q A +Y+ M+ N + YP + +
Sbjct: 77 NQSYQIFSHIENPNGFICNTMMKGYM-QRNSPCKAIWVYKFMLESNVAADN-YTYPILFQ 134
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
SC L K + ++K GF+ ++ L+N Y+ GN + ARK+FD S ++V
Sbjct: 135 SCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGN-LSDARKVFDGSSVLDMV 193
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPA---------------------------- 214
SW +M++GY VG+++ A ++D MP+R+V A
Sbjct: 194 SWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKD 253
Query: 215 ---WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKV 271
W+++I+ QN ++ +A+ F+ M ++ I ++V ++ LSA ++ GK+
Sbjct: 254 LVSWSALISCYEQNEMYEEALILFKEMN---ANGIMVDEVVVLSVLSACSRLLVVITGKL 310
Query: 272 IHGYVYRNGLDLDSFISNALIDMYG-------------------------------KCGS 300
+HG V + G++ + NALI MY KCG
Sbjct: 311 VHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGE 370
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+++AR FD K SW++MI+ +A + ++ +F+EM Q +PD +S+
Sbjct: 371 IEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEM---QIEGTKPDETILVSV 427
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
++ACTH ++QG+ + + ++ I L+++ + G E+ALEV KG++ E
Sbjct: 428 ISACTHLAALDQGK-WIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLE-EK 485
Query: 421 DEVVWGSLLNGCKIYGRTD--FAEFAVKKLIEIDPN 454
W +L+ G + G D F+ K + PN
Sbjct: 486 GVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPN 521
>gi|242083462|ref|XP_002442156.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
gi|241942849|gb|EES15994.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
Length = 557
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 275/500 (55%), Gaps = 45/500 (9%)
Query: 64 YARFIFDHL---TTPNTYLYTAMITAYA----SQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+AR +FD + N YL+TA I AYA S + A A +L+R M+RRG P+PN F
Sbjct: 60 HARAVFDSAVPAASENVYLWTATIAAYARHASSSLSAAEGALALFRLMLRRGVPRPNAFT 119
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSG---------------------------FEQYP 149
V++ C + R VH + +G F++ P
Sbjct: 120 ASSVVRCCSALRAVREGIQVHGFLFSAGLGRASHVGAALVDMYGSLGRVADARRVFDEMP 179
Query: 150 ----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
V+ +V Y R+G D+ R +FD M++R+ +SW ++ GY R G+ A LF+
Sbjct: 180 STNVVLGNTMVACYVRAG-DVEAGRDVFDRMAERDPISWNTLMMGYLRQGEAGVARDLFE 238
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
MPDR+V +WN VIA C+Q GL++DA+ F RM + +P+ T+ +SA G
Sbjct: 239 EMPDRNVNSWNMVIAACSQEGLWADAVEVFNRMRLA---RFQPDPATMAVLMSACAQLGS 295
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L + +HG + + ++++ + N+LIDMY KCGS+ +A F K S+N MI +
Sbjct: 296 LSIASQVHGILRKGCVEMNFHVLNSLIDMYAKCGSVSQAHLLFVETRLKDTVSYNVMICA 355
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
A HG +++ +F+EM + ++PD VTF+ +L+AC H GLV G+ YF+ M Y
Sbjct: 356 LAQHGHGRDALQIFDEM---SEEGLQPDAVTFLGVLSACAHAGLVHDGKFYFESMRTNYA 412
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
IE +HY C+VDL GRAG EEA ++ + M ++P VWG+L+N C+ + + + A
Sbjct: 413 IEQSPDHYACMVDLYGRAGLIEEAYQLARAMPVKPHAGVWGALINACRKHCNVEVGKVAA 472
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
++LI I+P N G ++LAN +WD V V + ++ + KT GCSW+EVD+ VH+F
Sbjct: 473 RELIAIEPGNPGTYVLLANTLARGQQWDFVETVWQSMRGKGIEKTAGCSWLEVDRVVHEF 532
Query: 506 HSLDKTHPRTEEIYDALESM 525
+ +HP ++EIY LE +
Sbjct: 533 LMGESSHPNSDEIYCILEHL 552
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/514 (35%), Positives = 282/514 (54%), Gaps = 37/514 (7%)
Query: 11 TLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL-KLSNLTYARFIF 69
L+ L++LE+C I+ LKQ+QS + G + F + +L+ FC + + +L Y I
Sbjct: 48 VLSNPFLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNIL 107
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
+ PNT+ + I + + A LY+ +++ +P+ + YP + K+C +
Sbjct: 108 FNTRNPNTFSWNVAIRGFLDSE-NPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSL 166
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN------------------------- 164
R + ++ GF+ V A+++ G+
Sbjct: 167 IRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMING 226
Query: 165 ---DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAG 221
++ ARKLFD M+++ +VSWT M+ GY + G + A LFD MPD+DV WN++I G
Sbjct: 227 YCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGG 286
Query: 222 CTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL 281
+A++ F M + NI P++VT+V LSA G L +G IH Y+ ++ L
Sbjct: 287 YVHANRGKEALALFNEMQ---AMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHEL 343
Query: 282 DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEE 341
L+ + ALIDMY KCG + +A + F + +W ++I+ ALHG + +I F E
Sbjct: 344 SLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSE 403
Query: 342 MMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG 401
M+ D+++ PD VTF+ LL+AC HGGLVE+GR YF M+ + + P+++HY C+VDLLG
Sbjct: 404 MI---DNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLG 460
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIM 461
RAG EEA E++K M IE D VVWG+L C+I+G E A KL+++DP++ G ++
Sbjct: 461 RAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVL 520
Query: 462 LANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
LAN+YGE W E K RK+++ R KTP SW
Sbjct: 521 LANMYGEAEMWKEAGKARKLMRQRGVEKTPD-SW 553
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/506 (34%), Positives = 284/506 (56%), Gaps = 11/506 (2%)
Query: 22 RCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN--LTYARFIFDHLTTPNTYL 79
RC+ LKQ+ + + G Q ++ K + C S+ L YA+ +FD P+T+L
Sbjct: 52 RCSKQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFL 111
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
+ MI ++ S LY+ M+ P N + +P +LK+C ++ T +H Q
Sbjct: 112 WNLMIRGFSCSDEPERSLL-LYQRMLCCSAPH-NAYTFPSLLKACSNLSALEETTQIHAQ 169
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
I K G+E +L+NSY+ +GN +A LFD + + VSW ++I GY + G +
Sbjct: 170 ITKLGYENDVYAVNSLINSYAATGN-FKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDI 228
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
A +LF M +++ +W ++I+G Q G+ +A+ F M + ++ P+ V+L ALSA
Sbjct: 229 ALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQ---NSDVEPDNVSLANALSA 285
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSW 319
G L+ GK IH Y+ + + +DS + LIDMY KCG + EA F +K + +W
Sbjct: 286 CAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAW 345
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
++I+ +A HG +I F EM Q I+P+ +TF ++L AC++ GLVE+G+ F
Sbjct: 346 TALISGYAYHGHGREAISKFMEM---QKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYN 402
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
M + Y ++P IEHYGC+VDLL RAG +EA ++ M ++P+ V+WG+LL C+I+ +
Sbjct: 403 MERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIE 462
Query: 440 FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVD 499
E + LI IDP +GG + ANI+ KWD+ + R+++K++ K PGCS I ++
Sbjct: 463 LGEEIGEILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLE 522
Query: 500 KQVHQFHSLDKTHPRTEEIYDALESM 525
H+F + D++HP E+I + M
Sbjct: 523 GTTHEFLAGDRSHPEIEKIQSKWKIM 548
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/468 (35%), Positives = 283/468 (60%), Gaps = 9/468 (1%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K+ + A +F+ + + ++A+I+ Y Q A ++ +M G + ++ +
Sbjct: 250 KMGQVMEAWKLFNEMDEKDMVSWSALISGY-EQNGMYEEALVMFIEMNANGM-RLDEVVV 307
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
VL +C + + KM+H +++ G E Y ++ AL++ YS SG +I A+KLF+
Sbjct: 308 VSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSG-EIMDAQKLFNGSH 366
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+ + +SW +MISG + G ++ A +LFD MP++D+ +W++VI+G Q+ FS+ ++ F
Sbjct: 367 NLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHE 426
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M + IRP++ LV +SA H L GK +H Y+ +NGL ++ + L+DMY K
Sbjct: 427 MQL---GQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMK 483
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG ++ A F+ +K ++SWN++I A++G E S+ +F EM +++ + P+ +TF
Sbjct: 484 CGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEM---KNNGVIPNEITF 540
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+ +L AC H GLV++GR +F M + + IEP ++HYGC+VDLLGRAG EA ++++ M
Sbjct: 541 MGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMP 600
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+ PD WG+LL CK +G T+ E +KLIE+ P++ G+ ++L+NI+ G W++V +
Sbjct: 601 MAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLE 660
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
VR M+K + KTPGCS IE + VH+F + DKTHP ++ L M
Sbjct: 661 VRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEM 708
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 153/585 (26%), Positives = 264/585 (45%), Gaps = 120/585 (20%)
Query: 4 VTNQLNQTLNQQ-------VLAILE----RCNHINHLKQLQSFLTTLGQSQTNFYAFKLV 52
+++ L T N + L+ILE C+++ ++ S + G F A +L+
Sbjct: 21 LSSALKSTFNHKPTFKPTITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLL 80
Query: 53 RFCT-LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQ 111
+F T L Y+ IFD + N +++ M+ AY Q A A LY+ MV+
Sbjct: 81 KFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYI-QSNSAEKALLLYKLMVKN-NVG 138
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN------- 164
P+ + YP V+++C L G K +H ++K GF+ V+ L+N Y+ GN
Sbjct: 139 PDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKL 198
Query: 165 -----------------------DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAA 201
D+ A+ +FD+M RN+V+ +MI ++G + A
Sbjct: 199 FDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAW 258
Query: 202 SLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIG 261
LF+ M ++D+ +W+++I+G QNG++ +A+ F M ++ +R ++V +V LSA
Sbjct: 259 KLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMN---ANGMRLDEVVVVSVLSACA 315
Query: 262 HTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG------------------------- 296
H +++ GK+IHG V R G++ + NALI MY
Sbjct: 316 HLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNS 375
Query: 297 ------KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
KCGS+++AR FD +K + SW+++I+ +A H ++ +F EM Q I
Sbjct: 376 MISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQ---I 432
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
RPD +S+++ACTH ++QG+ + K ++ + L+D+ + G E AL
Sbjct: 433 RPDETILVSVISACTHLAALDQGKWVHAYIRKN-GLKVNVILGTTLLDMYMKCGCVENAL 491
Query: 411 EVVKGMK----------------------------------IEPDEVVWGSLLNGCKIYG 436
EV GM+ + P+E+ + +L C+ G
Sbjct: 492 EVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMG 551
Query: 437 RTDFAEFAVKKLIE---IDPNNGGYGIMLANIYGELGKWDEVRKV 478
D +IE I+PN YG M+ ++ G G +E K+
Sbjct: 552 LVDEGRCHFASMIEKHGIEPNVKHYGCMV-DLLGRAGLLNEAEKL 595
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 196/579 (33%), Positives = 303/579 (52%), Gaps = 72/579 (12%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
L ++ L L +C +++ + Q+ + + Q F A KL+ +L +L A +F+H
Sbjct: 20 LLEEKLCDLHKCTNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSL-CRHLASAVNVFNH 78
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ PN +LY ++I A+A +H S F+ + M + G P+ F YP +LK+C
Sbjct: 79 VPHPNVHLYNSIIRAHAHNSSHRSLPFNAFFQMQKNGL-FPDNFTYPFLLKACSGPSSLP 137
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN----------------DI--------G 167
+M+H + K GF V +L++SYSR GN D+ G
Sbjct: 138 LVRMIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGG 197
Query: 168 IAR--------KLFDEMSDR-------------------------------NVVSWTAMI 188
+ R KLFDEM DR N+VSW+ M+
Sbjct: 198 LVRCGELQGACKLFDEMPDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMV 257
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
GY++ GD+ A LFD P ++V W ++IAG + GL +A + +M +RP
Sbjct: 258 CGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKME---EAGMRP 314
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
+ L+ L+A +GML LGK IH + R + + NA IDMY KCG L A F
Sbjct: 315 DDGFLLSILAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVF 374
Query: 309 D-RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
+KK + SWNSMI FA+HG E ++ +F M++ PD TF+ LL ACTH
Sbjct: 375 SGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMVQ---EGFEPDTYTFVGLLCACTHA 431
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GLV +GR YF M K Y I PQ+EHYGC++DLLGR G +EA +++ M +EP+ ++ G+
Sbjct: 432 GLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGT 491
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LLN C+++ D A ++L +++P++ G +L+NIY + G W V VR +K+
Sbjct: 492 LLNACRMHNDVDLARAVCEQLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGG 551
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K G S IEV+++VH+F D++HP++++IY ++ +V
Sbjct: 552 EKPSGASSIEVEEEVHEFTVFDQSHPKSDDIYQMIDRLV 590
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 179/503 (35%), Positives = 285/503 (56%), Gaps = 49/503 (9%)
Query: 34 SFLTTLGQSQTNFYAFKL-------VRFCTLKLS--NLTYARFIFDHLTTPNTYLYTAMI 84
S + L ++ +A+ L +F + +S + A +F+ + P ++L+ MI
Sbjct: 731 SCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMI 790
Query: 85 TAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG 144
+A+ SS LY M+ +G +P++F +P LKSC + + + K++H +V G
Sbjct: 791 RGFATDGRFLSS-LELYSKMMEKGL-KPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCG 848
Query: 145 FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLF 204
V+ ALV+ Y++ G DI AR +FD+M+ R++VSWT+MISGY
Sbjct: 849 CSNDLFVDAALVDMYAKCG-DIEAARLVFDKMAVRDLVSWTSMISGY------------- 894
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
NG S+ + FF M S + PN+V+++ L A G+ G
Sbjct: 895 ------------------AHNGYNSETLGFFDLMR---SSGVIPNRVSILSVLLACGNLG 933
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
L+ G+ H YV + G + D ++ A++DMY KCGSL AR FD + K L W++MI
Sbjct: 934 ALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIA 993
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
S+ +HG +I +F++M++ +RP VTF +L+AC+H GL+E+G+ YF+LMT+ +
Sbjct: 994 SYGIHGHGRKAIDLFDQMVKA---GVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEF 1050
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
I ++ +Y C+VDLLGRAG+ EA+++++ M +EPD +WGSLL C+I+ D AE
Sbjct: 1051 VIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKI 1110
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
L +DP + GY ++L+NIY +W+EV KVRKM+ R A K G S +E D QVH+
Sbjct: 1111 ADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHK 1170
Query: 505 FHSLDKTHPRTEEIYDALESMVA 527
F D++HP+ E++Y LE + A
Sbjct: 1171 FGVGDRSHPQWEKLYAKLEELAA 1193
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 151/460 (32%), Positives = 250/460 (54%), Gaps = 39/460 (8%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F + + ++ MI YA+ A A+ A +L+ +M+ + + +PN L++C
Sbjct: 263 LFSKMPEKDVISWSTMIACYANNEA-ANEALNLFHEMIEK-RFEPNSVTVVSALQACAVS 320
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
K +H V GFE V TAL++ Y + DE
Sbjct: 321 RNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCP--------DE------------ 360
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
A LF +P +DV +W ++++G QNG+ ++ FR M +SD I+
Sbjct: 361 ------------AVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNM---LSDGIQ 405
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P+ V +V L+A G+ Q +HGYV R+G + + F+ +LI++Y KCGSL +A +
Sbjct: 406 PDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKL 465
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F + + W+SMI ++ +HG+ ++ +F++M++ + +RP+ VTF+S+L+AC+H
Sbjct: 466 FKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVK--NSTVRPNNVTFLSILSACSHA 523
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GLVE+G F M Y++ P EH+G +VDLLGR G+ +A++++ M I VWG+
Sbjct: 524 GLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGA 583
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LL C+I+ + E A K L +DP++ GY I+L+NIY GKWD V ++R +K+R
Sbjct: 584 LLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGL 643
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
K G S +EV VH F + D+ HP +++IY+ L + A
Sbjct: 644 KKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEA 683
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 132/517 (25%), Positives = 224/517 (43%), Gaps = 86/517 (16%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
Q ++ + + CN+ + QL S + G F+A KL K ++L AR +FD
Sbjct: 5 QVLVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYA-KCASLQAARKVFDETP 63
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
PN +L+ + + +Y + L+ M+ P+ F P LK+C +
Sbjct: 64 HPNVHLWNSTLRSYCREK-QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELG 122
Query: 134 KMVHTQIVKSG----------------------------FEQY----PVVETALVNSYSR 161
K++H K+ FE++ V+ T++V Y +
Sbjct: 123 KVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQ 182
Query: 162 SGNDIGIARKLFDEM-----------SDRNVVSWTA------------------------ 186
+ ND A LF +M + +VVS A
Sbjct: 183 N-NDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDL 241
Query: 187 -----MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
+++ Y + G K AA+LF MP++DV +W+++IA N ++A++ F M
Sbjct: 242 PLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEM--- 298
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+ PN VT+V AL A + L+ GK IH G +LD +S ALIDMY KC
Sbjct: 299 IEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCP 358
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
EA F R KK + SW ++++ +A +G + S+ VF M+ I+PD V + +L
Sbjct: 359 DEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNML---SDGIQPDAVAVVKIL 415
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
A + G+ +Q + ++ + L++L + G +A+++ KGM I D
Sbjct: 416 AASSELGIFQQALCLHGYVVRS-GFNSNVFVGASLIELYSKCGSLGDAVKLFKGM-IVRD 473
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIE---IDPNN 455
V+W S++ I+GR A ++++ + PNN
Sbjct: 474 VVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNN 510
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 191/583 (32%), Positives = 307/583 (52%), Gaps = 80/583 (13%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
+ VLA++E C +I LKQ+ + S T F K++ L + L YA +F+
Sbjct: 7 KSVLALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIIN-SFLSHACLDYATQVFNQTQ 65
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
P+ ++Y AMI AY+S A S+Y M +++ YP V K+C
Sbjct: 66 EPDGFIYNAMIRAYSSSQT-PCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKG 124
Query: 134 KMVHTQIVKSG---------------------------FEQYP----VVETALVNSYSRS 162
K VH IV+ G F+++ V AL+ Y+R
Sbjct: 125 KEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQ 184
Query: 163 G---NDIGIARKLFD------------------------------------EMSDRNVVS 183
G + G+ +++ + +M R V
Sbjct: 185 GMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVK 244
Query: 184 W-TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
A+I+ Y + G + A LFD +P+++ WNS+I G Q G ++ I R M +
Sbjct: 245 LEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHL-- 302
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
N++P++ T+ LSA G LG +H + + G+ D FI ALIDMY KCG +
Sbjct: 303 -SNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGI-WDVFIGTALIDMYAKCGFIG 360
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
AR+ FD+ +++ + +WN++++ +A HGQ+E++I +F EM ++ RPD +TF+++L+
Sbjct: 361 AARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEM---RESGARPDSITFLAVLH 417
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC H GLVE G+ YF LM + Y+I P++EHYGC+VDLLGRAG +EA E++K M +EP+
Sbjct: 418 ACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNV 477
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
VVWG+LL+ C I+G + E+A +I+++ +GG ++LAN+Y +++ V+ VR+M+
Sbjct: 478 VVWGALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMM 537
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
++ K+ GCS IE+ VH+F DK HPR+EEIY L+ +
Sbjct: 538 VEKGICKSHGCSMIEIGDVVHEFVVADKMHPRSEEIYSVLDEL 580
>gi|302142959|emb|CBI20254.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 185/504 (36%), Positives = 283/504 (56%), Gaps = 50/504 (9%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYL 79
+++C+ + L+ + + + +Q F + + C++ + YA F H+ PN ++
Sbjct: 19 IKKCSMVKELESVYASMIKANANQDCFLMNQFIAACSI-FHRIDYAILAFTHMQEPNVFV 77
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
Y AMI A Q H A Y DMV+ Q P F + ++K+C V E + VH
Sbjct: 78 YNAMIRALV-QCYHPVQALDCYLDMVQ-AQVSPTSFTFSSLVKACSLVSELGFGEAVHGH 135
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
I K GF+ + V+TALV+ Y +G I AR++FDEMS+R+V +WT MIS + R GD+ +
Sbjct: 136 IWKYGFDSHVFVQTALVDFYGNAGK-IVEARRVFDEMSERDVFAWTTMISVHARTGDMSS 194
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
A LFD MP R+ +WN++I G ++ A F +M PN+
Sbjct: 195 ARQLFDEMPVRNTASWNAMIDGYSRLRNVESAELLFSQM---------PNR--------- 236
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSW 319
D+ S+ + +I Y + L ++ F + KK L W
Sbjct: 237 ----------------------DIISWTT--MIACYSQNKHLDKSLVVFFKLRKKNLFCW 272
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
NS+I A+HG +E ++ +F M R I+P+GVTFIS+L ACTH GLVE+GR F
Sbjct: 273 NSIIEGLAVHGYAEEALAMFSRMQR---EKIKPNGVTFISVLGACTHAGLVEEGRKRFLS 329
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
M++ + I P+IEHYGC+VDLLG+AG E+ALE+V+ M++EP+ V+WG+LL GCK++
Sbjct: 330 MSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLK 389
Query: 440 FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT-PGCSWIEV 498
A+ AV + ++PNN GY +L N+Y E+ +W EV +R +K+ KT PG SWIE+
Sbjct: 390 IAQVAVNESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPGSSWIEM 449
Query: 499 DKQVHQFHSLDKTHPRTEEIYDAL 522
D+++HQF + DK+H ++EIY L
Sbjct: 450 DRKIHQFAASDKSHLASDEIYTLL 473
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 168/415 (40%), Positives = 257/415 (61%), Gaps = 7/415 (1%)
Query: 113 NQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKL 172
+ F P VLKSC D+ + VH Q ++ G E V +L++ Y + G IG ARKL
Sbjct: 106 DNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGV-IGDARKL 164
Query: 173 FDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAI 232
FD+M R++ SW A+I+GY + G+I A LF+ M R++ +W ++I+G TQNG A+
Sbjct: 165 FDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQAL 224
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALI 292
F M ++ ++PN VT+V L A + L+ G+ IH + GL L+S + AL
Sbjct: 225 GLFDEM-LQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALA 283
Query: 293 DMYGKCGSLKEARRAFDRNSK--KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
MY KC SL EAR FD ++ K L +WN+MI ++A HG ++ +FE M+R +
Sbjct: 284 GMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRA---GV 340
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
+PD VTF+ LL+ C+H GL++ G +F M + +EP++EHY C+VDLLGRAGR EA
Sbjct: 341 QPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAK 400
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELG 470
E++ M ++ VWG+LL C+ + + AE A ++L ++P+N G ++L+N+Y E G
Sbjct: 401 ELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAG 460
Query: 471 KWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
W+EV+K+R +LK + K+PGCSWIE++ + H F DK+HP+ +EIY LE++
Sbjct: 461 MWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEAL 515
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 179/462 (38%), Positives = 270/462 (58%), Gaps = 24/462 (5%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
+L AR +FD + + +MI Y + A A + YR+M G +P++ V
Sbjct: 129 DLDGARKMFDKSCVRDLVSWNSMINGYVRR-GWAYEALNFYREMKVEG-IKPDEVTMIGV 186
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
+ SC + + + H I ++G + + AL++ Y + GN + ARKLFD M+++
Sbjct: 187 VSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGN-LESARKLFDSMTNKT 245
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
+VSWT M LFD MPD+DV WN++I G +A++ F M
Sbjct: 246 MVSWTTM---------------LFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQ- 289
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ NI P++VT+V LSA G L +G IH Y+ ++ L L+ + ALIDMY KCG
Sbjct: 290 --AMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGK 347
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+ +A + F + +W ++I+ ALHG + +I F EM+ D+++ PD VTF+ L
Sbjct: 348 ITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMI---DNSVMPDEVTFLGL 404
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC HGGLVE+GR YF M+ + + P+++HY C+VDLLGRAG EEA E++K M IE
Sbjct: 405 LSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEA 464
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
D VVWG+L C+I+G E A KL+++DP++ G ++LAN+YGE W E K RK
Sbjct: 465 DAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRK 524
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+++ R KTPGCS IEV+ V++F DK+HP++E+IY+ L
Sbjct: 525 LMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECL 566
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 192/414 (46%), Gaps = 58/414 (14%)
Query: 40 GQSQTNFYAFKLVRFCTL-KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAF 98
G + F + +L+ FC + + +L Y I + PNT+ + I + + A
Sbjct: 5 GLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSE-NPREAV 63
Query: 99 SLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNS 158
LY+ +++ +P+ + YP + K+C + R + ++ GF
Sbjct: 64 VLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGF------------- 110
Query: 159 YSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSV 218
D ++ A+I GD+ A +FD RD+ +WNS+
Sbjct: 111 -------------------DSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSM 151
Query: 219 IAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR 278
I G + G +A++F+R M +E I+P++VT++ +S+ L LG+ H Y+
Sbjct: 152 INGYVRRGWAYEALNFYREMKVE---GIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEE 208
Query: 279 NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS----------------WNSM 322
NGL L ++NAL+DMY KCG+L+ AR+ FD + K + S WN+M
Sbjct: 209 NGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAM 268
Query: 323 INSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK 382
I + + + ++ +F EM Q NI PD VT +S L+AC+ G ++ G + +
Sbjct: 269 IGGYVHANRGKEALALFNEM---QAMNINPDEVTMVSCLSACSQLGALDVG-IWIHHYIE 324
Query: 383 TYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
+ + + L+D+ + G+ +A++V + + + + W ++++G ++G
Sbjct: 325 KHELSLNVALGTALIDMYAKCGKITKAIQVFQELP-GRNSLTWTAIISGLALHG 377
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 134/325 (41%), Gaps = 57/325 (17%)
Query: 214 AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH 273
+WN I G + +A+ ++R+ D +P+ T A ++++G I
Sbjct: 45 SWNVAIRGFLDSENPREAVVLYKRVLQ--CDGTKPDNYTYPLLFKACARLSLIRMGSEIL 102
Query: 274 GYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSE 333
G+V G D D F+SNA+I + CG L AR+ FD++ + L SWNSMIN + G +
Sbjct: 103 GHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAY 162
Query: 334 NSICVFEEMMRCQDHNIRPDGVTFISLLNACTH--------------------------- 366
++ + EM + I+PD VT I ++++C
Sbjct: 163 EALNFYREM---KVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLAN 219
Query: 367 --------GGLVEQGRAYFKLMTKTYRI-----------EPQIEHYGCLVDLLGRAGRFE 407
G +E R F MT + + + + ++ A R +
Sbjct: 220 ALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGK 279
Query: 408 EALEV---VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID--PNNGGYGIML 462
EAL + ++ M I PDEV S L+ C G D + + IE N G L
Sbjct: 280 EALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIW-IHHYIEKHELSLNVALGTAL 338
Query: 463 ANIYGELGKWDEVRKVRKMLKDRNA 487
++Y + GK + +V + L RN+
Sbjct: 339 IDMYAKCGKITKAIQVFQELPGRNS 363
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 189/520 (36%), Positives = 296/520 (56%), Gaps = 15/520 (2%)
Query: 9 NQTLNQQVLAILERCNHIN--HLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYA 65
+ L + ++++L + N N H++ + SQ F AF+L+R +C K++ + +A
Sbjct: 22 DSNLRRVIISLLHK-NRKNPKHVQSIHCHAIKTRTSQDPFVAFELLRVYC--KVNYIDHA 78
Query: 66 RFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
+F PN YLYT++I + S ++ + A +L+ MVR+ + + +LK+C
Sbjct: 79 IKLFRCTQNPNVYLYTSLIDGFVSFGSY-TDAINLFCQMVRK-HVLADNYAVTAMLKACV 136
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
K VH ++KSG + LV Y + G + ARK+FD M +R+VV+ T
Sbjct: 137 LQRALGSGKEVHGLVLKSGLGLDRSIALKLVELYGKCGV-LEDARKMFDGMPERDVVACT 195
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
MI G ++ A +F+ M RD W VI G +NG F+ + FR M ++
Sbjct: 196 VMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVK---G 252
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
+ PN+VT VC LSA G L+LG+ IH Y+ + G++++ F++ ALI+MY +CG + EA+
Sbjct: 253 VEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQ 312
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
FD K ++++NSMI ALHG+S ++ +F EM++ +RP+G+TF+ +LNAC+
Sbjct: 313 ALFDGVRVKDVSTYNSMIGGLALHGKSIEAVELFSEMLK---ERVRPNGITFVGVLNACS 369
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
HGGLV+ G F+ M + IEP++EHYGC+VD+LGR GR EEA + + M +E D+ +
Sbjct: 370 HGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEEAFDFIGRMGVEADDKML 429
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
SLL+ CKI+ E K L E + G IML+N Y LG+W +VR+ ++
Sbjct: 430 CSLLSACKIHKNIGMGEKVAKLLSEHYRIDSGSFIMLSNFYASLGRWSYAAEVREKMEKG 489
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PGCS IEV+ +H+F S D HP + IY LE +
Sbjct: 490 GIIKEPGCSSIEVNNAIHEFFSGDLRHPERKRIYKKLEEL 529
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 261/433 (60%), Gaps = 19/433 (4%)
Query: 101 YRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK------MVHTQIVKSGFEQYPVVETA 154
+ DM R G P Y VL +C +GT+ VH ++V SG VE A
Sbjct: 110 FVDMARAGAA-PTPVTYVSVLSAC-----GKGTRDVLLGMQVHGRVVGSGVLPDLRVENA 163
Query: 155 LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA 214
LV+ Y+ D+G A K+FD M R+VVSWT+++SG R+G + A LFD MP+RD +
Sbjct: 164 LVDMYAECA-DMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVS 222
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
W ++I G F +A+ FR M N+ ++ T+V ++A G L++G+ +
Sbjct: 223 WTAMIDGYVWAARFREALEMFREMQYS---NVSADEFTMVSVITACAQLGALEMGEWVRV 279
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
Y+ R G+ +D+F+ NALIDMY KCGS++ A F + +W ++I A++G E
Sbjct: 280 YMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEE 339
Query: 335 SICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG 394
+I +F M+R + PD VTFI +L ACTH GLV++GR +F M + Y I P + HYG
Sbjct: 340 AIEMFHRMIRVSE---TPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYG 396
Query: 395 CLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPN 454
C++DLLGRAG+ EAL+ + M + P+ +WG+LL C+++G ++ E ++L+E+DP
Sbjct: 397 CIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPE 456
Query: 455 NGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPR 514
N I+L+NIY + +W++VR++R + ++ K PGCS IE+D +H+F + D++HP
Sbjct: 457 NSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPM 516
Query: 515 TEEIYDALESMVA 527
++EIY LES+++
Sbjct: 517 SKEIYSKLESIIS 529
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 123/298 (41%), Gaps = 47/298 (15%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+L + AR +FD + +T +TAMI Y A A ++R+M + ++F
Sbjct: 201 RLGQVDEARDLFDRMPERDTVSWTAMIDGYV-WAARFREALEMFREM-QYSNVSADEFTM 258
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
V+ +C + + V + + G + V AL++ YS+ G+ I A +F M
Sbjct: 259 VSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGS-IERALDVFKGMH 317
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
R+ +WTA +I G NG +AI F R
Sbjct: 318 HRDKFTWTA-------------------------------IILGLAVNGYEEEAIEMFHR 346
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK-----VIHGYVYRNGLDLDSFISNALI 292
M + VS+ P++VT + L+A H G++ G+ +I Y + + +I
Sbjct: 347 M-IRVSET--PDEVTFIGVLTACTHAGLVDKGREFFLSMIEAY----NIAPNVVHYGCII 399
Query: 293 DMYGKCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
D+ G+ G + EA D+ T W +++ + +HG SE V E ++ N
Sbjct: 400 DLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPEN 457
>gi|225423493|ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 182/510 (35%), Positives = 288/510 (56%), Gaps = 15/510 (2%)
Query: 21 ERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL-SNLTYARFIFDHLTTPNTYL 79
E+C H+ LK+ + + T G +F +L+ FC+ L +L +A +F + P +
Sbjct: 13 EKCRHMKQLKEAHAQVLTCGLGTDSFALSRLLAFCSHPLHGSLPHAWKLFQQIQHPTICI 72
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
MI A+ + + +Y M+ G P+ + P+VLK+C + + H Q
Sbjct: 73 CNTMIKAFVLK-GKLINTIQIYSQMLENGL-YPDNYTLPYVLKACAGLQSCHLGESAHGQ 130
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
VK GF V L+ YS GN + AR +FDEM VSWT MISGY +VGD++
Sbjct: 131 SVKLGFWFDIFVGNTLIAMYSSFGN-VRAARCIFDEMPWHTAVSWTVMISGYAKVGDVET 189
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
A LFD P +D W S+I+G QN F + + FR M S + P++ LV L A
Sbjct: 190 ARMLFDEAPMKDRGIWGSIISGYVQNNCFKEGLQMFRLMQ---STGLEPDEAILVSILCA 246
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSW 319
H G +++G +H Y+ + G L +S LIDMY KCGSL A++ FD S++ W
Sbjct: 247 CAHLGAMEIGVWVHRYLDQLGHPLSVRLSTGLIDMYAKCGSLDIAKKLFDGMSQRDTICW 306
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
N+MI+ A++G +N++ +F EM + ++PD +TFI++ AC++ G+ +
Sbjct: 307 NAMISGMAMNGDGDNALRLFSEM---EKAGVKPDDITFIAIFTACSYSGMAHEAIRLLNS 363
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM--KIEPDE--VVWGSLLNGCKIY 435
M Y +EP+ EHYGC+VDLLGRAG +EA E++ M P E + W +LL+ C +
Sbjct: 364 MCTVYNMEPKSEHYGCIVDLLGRAGLLKEAKELILKMPNSSSPTEQAIAWRALLSACCSH 423
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
G+T+ AE A ++L ++ ++G Y ++L+N+Y GK D VR++RKM+++R K PGCS
Sbjct: 424 GQTEVAEDAAQRLFHLEHHSGAY-VLLSNLYAAAGKQDHVRRIRKMMENRGVDKAPGCSS 482
Query: 496 IEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
++++ VH+F + ++TH + EE++ LE M
Sbjct: 483 VKINGVVHEFIAGEETHLQMEEVHRVLEKM 512
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 178/469 (37%), Positives = 273/469 (58%), Gaps = 11/469 (2%)
Query: 45 NFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPA--HASSAFSLYR 102
N A KL+ C +NL +A+ IF L PN + + A+I A+ + A HA + F+ R
Sbjct: 45 NLIAVKLIGACAAN-ANLYHAQLIFAQLPNPNVFSWNAIIKAHINCGAWEHALNCFN--R 101
Query: 103 DMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRS 162
+ P PN++IY ++K+C + VH ++KSG + + T+LV+ Y +
Sbjct: 102 QLSLPSAPNPNEYIYTSLIKACAGLEAIADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKF 161
Query: 163 GNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC 222
+ A ++FDEM R+VVSW M+SGY GD+++A +FD M +RDV +WN++I G
Sbjct: 162 -REPASAGQVFDEMPLRDVVSWNTMVSGYCLCGDLESARRVFDQMLERDVISWNAMIGGY 220
Query: 223 TQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLD 282
QNG +SDAI F M + + P+ VTLV LSA H G L G+ I +V G
Sbjct: 221 VQNGKYSDAIEVFHEM--QKVGGVVPDDVTLVSVLSACAHVGALDFGRWIDRFVGWRGRG 278
Query: 283 LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM 342
L+ ++ NALIDMY KCG+++EARR FD ++ + SW++MI HG ++ + + +M
Sbjct: 279 LNLYLGNALIDMYAKCGTMEEARRIFDGMRERDVISWSTMICGSGTHGDADEAFGYYSKM 338
Query: 343 MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGR 402
+ C ++P+ VTF+ LL+AC+H GLV++G F M + YRI P++ HYGC++DLL R
Sbjct: 339 LEC---GVKPNEVTFMGLLSACSHAGLVDKGIELFSRMIQEYRIVPKVGHYGCVIDLLSR 395
Query: 403 AGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIML 462
AGR +EA +++ M IEP+ +VWG+LL GC+I+ E + L+E+D G + +
Sbjct: 396 AGRLDEAEDLINSMPIEPNVIVWGALLGGCRIHKDFRRGERVAQHLLELDSEYTGSYVYI 455
Query: 463 ANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKT 511
A +G+ D+ ++ + K PGCS IEV VH+F D T
Sbjct: 456 AGAKASVGRVDDAANCWLRMQHKGIIKDPGCSKIEVHNTVHEFKECDNT 504
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 181/517 (35%), Positives = 287/517 (55%), Gaps = 24/517 (4%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L R + KQ+ L L + +N + + L+ ++ +AR +FD +
Sbjct: 131 ILKACARVCLVEEGKQIHGLLMKL-EIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQ 189
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI-YPHVLKSCPDVLESRGTK 134
++ Y +MI Y S L R++ + I + +L + G
Sbjct: 190 DSVSYNSMIDGYVK-----SGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLA 244
Query: 135 MVHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
+ FE+ P V ++ +++ G I A LF+ M R+V+SW+ MI G
Sbjct: 245 L-------ELFEKMPERDLVSWNTIIGGFAKCGR-IEFAHSLFNRMPKRDVISWSNMIDG 296
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y ++GDIK A +LFD MPD+DV A+N+++AG QNG +++A+ F M + N+ P++
Sbjct: 297 YAKLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEM--QRQSNLSPDE 354
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
TLV ALSAI G ++ +H Y NG+ + ++ ALIDMY KCGS++ A FD
Sbjct: 355 TTLVVALSAISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDG 414
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
+K + WN+MI+ A +G + + + EM R +++PDG+TFI +LNAC H GLV
Sbjct: 415 VDQKGIDHWNAMISGMARNGLGKLAFGMLLEMHRL---SVKPDGITFIGVLNACAHAGLV 471
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
++G F+LM K +++EP+++HYGC+VD+LG+AG E AL+ ++ M IEP++++W +LL+
Sbjct: 472 KEGLICFELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLS 531
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
C+ + E K L+ +D N ++L+NIY LG W KVR M+K +N K
Sbjct: 532 ACQNHENFTIGELIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKV 591
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
PGCSWIE++ VH+F DK+HP EIY L+ A
Sbjct: 592 PGCSWIELEGVVHEFLVRDKSHPYVSEIYSVLDGFGA 628
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 212/461 (45%), Gaps = 58/461 (12%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLV--RFCTLKLSNLTYARFIF----- 69
L +L C N + Q+ + + G + + K++ + + +AR++F
Sbjct: 18 LLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSPHKPLVEFARYVFFTRYA 77
Query: 70 ------DHLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
+HL + +L+ A+I +Y+ ++P A F + M+ G ++F + +L
Sbjct: 78 VQRIRRNHLDD-DPFLWNAVIKSYSHGNEPVRALVLFCM---MLENGFCV-DKFSFSLIL 132
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
K+C V K +H ++K + L+ Y R G DI AR++FD M ++
Sbjct: 133 KACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCG-DIEFARQVFDRMPIQDS 191
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMP--DRDVPAWNSVIAGCTQN----GLFSDAISFF 235
VS+ +MI GY + G I A LFDSMP D+++ +WNS++ G Q GL A+ F
Sbjct: 192 VSYNSMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDGIGL---ALELF 248
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS-NALIDM 294
+M P + LV + IG G + G++ + N + IS + +ID
Sbjct: 249 EKM---------PER-DLVSWNTIIG--GFAKCGRIEFAHSLFNRMPKRDVISWSNMIDG 296
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y K G +K AR FD K + ++N+++ +A +G ++ +F EM R N+ PD
Sbjct: 297 YAKLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQR--QSNLSPDE 354
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG----CLVDLLGRAGRFEEAL 410
T + L+A + G VE+ + Y +E I G L+D+ + G E A+
Sbjct: 355 TTLVVALSAISQLGHVEKAAS-----MHNYFLENGISVTGKVAVALIDMYSKCGSIENAI 409
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
+ G+ + + W ++++G R + A L+E+
Sbjct: 410 LIFDGVDQKGID-HWNAMISG---MARNGLGKLAFGMLLEM 446
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 22/258 (8%)
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
D D WN+VI + A+ F M + + ++ + L A +++
Sbjct: 87 DDDPFLWNAVIKSYSHGNEPVRALVLFCMM---LENGFCVDKFSFSLILKACARVCLVEE 143
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
GK IHG + + + + F+ N LI MY +CG ++ AR+ FDR + S+NSMI+ +
Sbjct: 144 GKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVK 203
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
G + + +F+ M +D N+ +++ S+L GG Q + L + + P
Sbjct: 204 SGTIDLARELFDS-MPLEDKNL----ISWNSML-----GGFA-QTKDGIGLALELFEKMP 252
Query: 389 Q--IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG-----RTDFA 441
+ + + ++ + GR E A + M + D + W ++++G G RT F
Sbjct: 253 ERDLVSWNTIIGGFAKCGRIEFAHSLFNRMP-KRDVISWSNMIDGYAKLGDIKVARTLFD 311
Query: 442 EFAVKKLIEIDPNNGGYG 459
E K ++ + GY
Sbjct: 312 EMPDKDVVAFNTIMAGYA 329
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 179/500 (35%), Positives = 278/500 (55%), Gaps = 44/500 (8%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYA 88
KQL + + G A KLV +C +L+ AR +FD + N +L+ +I YA
Sbjct: 95 KQLHAQVCLAGFGFDTVIATKLVNLYCVC--DSLSSARLLFDRIPKHNIFLWNVLIRGYA 152
Query: 89 SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQY 148
+ +A LY M G P+ F +P VLK+C + + +H +V++G+E
Sbjct: 153 WNGPY-EAAVQLYYQMFDYGL-VPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWE-- 208
Query: 149 PVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP 208
++V A+I Y + G + +A +FD +
Sbjct: 209 ------------------------------KDVFVGAALIDMYAKCGCVGSAREVFDKIL 238
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
RD WNS++A +QNG +S M V +RP + TLV A+SA L
Sbjct: 239 VRDAVLWNSMLAAYSQNGHPDACLSLCSEM---VLTGLRPTEATLVTAISASADNAALPQ 295
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
G+ +HG +R + + AL+DMY KCGS++ AR F+R KR+ SWN+MI +A+
Sbjct: 296 GRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAM 355
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
HG + ++ +FEEM R +PD +TF+ +L+AC+HGGL+E+G +F+ M + Y+I+P
Sbjct: 356 HGHATEALDLFEEMNRVA----KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDP 411
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL 448
++HY C+VDLLG +GR +EA ++ MK+ PD VWG+LLN CKI+ + E A+++L
Sbjct: 412 TVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERL 471
Query: 449 IEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSL 508
IE++P++ G ++L+NIY + GKW+ V K+RK++ DR K+ CSWIEV +VH F S
Sbjct: 472 IELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSG 531
Query: 509 DKTHPRTEEIYDALESMVAL 528
D +HP ++EIY LE + L
Sbjct: 532 DTSHPLSDEIYSELERVGGL 551
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 12/254 (4%)
Query: 19 ILERC---NHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L+ C + I H +++ + G + F L+ K + AR +FD +
Sbjct: 182 VLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYA-KCGCVGSAREVFDKILVR 240
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ L+ +M+ AY SQ H + SL +MV G +P + + + D +
Sbjct: 241 DAVLWNSMLAAY-SQNGHPDACLSLCSEMVLTGL-RPTEATLVTAISASADNAALPQGRE 298
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+H + FE + V+TALV+ Y++ G+ + +AR LF+ + + VVSW AMI+GY G
Sbjct: 299 LHGLSWRQEFESHDKVKTALVDMYAKCGS-VRVARNLFERLGVKRVVSWNAMITGYAMHG 357
Query: 196 DIKNAASLFDSMPDRDVP---AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
A LF+ M P + V++ C+ GL + FF M + I P
Sbjct: 358 HATEALDLFEEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDY--KIDPTVQH 415
Query: 253 LVCALSAIGHTGML 266
C + +GH+G L
Sbjct: 416 YTCMVDLLGHSGRL 429
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 5/174 (2%)
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
++ GK +H V G D+ I+ L+++Y C SL AR FDR K + WN +I
Sbjct: 91 IKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRG 150
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
+A +G E ++ ++ +M D+ + PD TF +L AC +E GR + + +T
Sbjct: 151 YAWNGPYEAAVQLYYQMF---DYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQT-G 206
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
E + L+D+ + G A EV + + D V+W S+L G D
Sbjct: 207 WEKDVFVGAALIDMYAKCGCVGSAREVFDKILVR-DAVLWNSMLAAYSQNGHPD 259
>gi|224118458|ref|XP_002331487.1| predicted protein [Populus trichocarpa]
gi|222873565|gb|EEF10696.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 192/559 (34%), Positives = 309/559 (55%), Gaps = 46/559 (8%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARF 67
N + +L +E C + LKQ+Q+ +T F +++ FC L S ++ +A
Sbjct: 46 NTIITHPILLAMESCTSMLQLKQIQAHMTKTALISHTFPVSRVLAFCALSDSGDINHAHL 105
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRG-QPQPNQFIYPHVLKSCPD 126
+F L PNTY++ MI Y S+ + F + MV++G + F++ LK+C
Sbjct: 106 LFSQLQNPNTYIWNTMIRGY-SKAKMGQTGFLFFCQMVQKGVEMDCRSFVF--ALKACEQ 162
Query: 127 VLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
L K VH + K GF +V+ LV+ Y G +G+AR +FDE+S+R+VVSWT+
Sbjct: 163 FLGVLEGKSVHCVVWKMGFVYTLLVQNGLVHFYGLRGC-LGLARLVFDEISERDVVSWTS 221
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWN-----SVIAGCTQNG--------------- 226
MI GY++ A LFDSM V N +V++ C+Q G
Sbjct: 222 MIDGYSKHKWCDEALKLFDSMLMYGVVEPNEVTMIAVLSSCSQKGDLILGKTFLEYVKTR 281
Query: 227 -------LFSDAISFFRRMGM-----EVSDNI----RPNQVTLVCALSAIGHTGMLQLGK 270
L + + + + G E+ D + P + TL C L G G L +G+
Sbjct: 282 NVTRSLNLMNAILDMYVKCGCLDSAREIFDTMGAAFAPMENTLACVLPVCGQLGCLDVGQ 341
Query: 271 VIH-GYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
IH YV ++ ++NALIDMY KCG + EA + F+ ++ L SWNSMI ++A H
Sbjct: 342 WIHRNYVRMRYNEISVILANALIDMYAKCGVIHEAAKVFNDMPERNLVSWNSMITAYASH 401
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
G ++ ++ VFE M+ +PD +T + +L+AC+HGGLV +G+ YF+ M + Y IEP+
Sbjct: 402 GHAKQALSVFERMI---SGGFKPDDITLVGVLSACSHGGLVAEGQEYFQNMKRKYGIEPK 458
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
EHY C++DLLGR G E+A E++ M +EP WG+L++ C+++G + A+ A +L+
Sbjct: 459 NEHYACMIDLLGRVGLLEDAYELITKMPMEPSAAAWGALVHACRMHGNVEVAKIAAPRLL 518
Query: 450 EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLD 509
E+DP + G ++LANI +W +V+ R+M+++R K PG S +EV+ Q H+F + D
Sbjct: 519 ELDPEDSGIYVLLANICASGRRWGDVKMARRMMRERRVKKIPGRSIVEVEGQFHEFLAGD 578
Query: 510 KTHPRTEEIYDALESMVAL 528
++HP++E IY+AL+ + A+
Sbjct: 579 ESHPQSEGIYNALDQLFAM 597
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/472 (36%), Positives = 285/472 (60%), Gaps = 12/472 (2%)
Query: 62 LTYARFIFD--HLTTPNTYLYTAMITA--YASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
++YA IF HL ++++ +I A + P S S+Y M R P+ +
Sbjct: 7 ISYANPIFHIRHLKL-ESFVWNIIIRAIVHNVSPPQRHSPISVYFRM-RHHCVSPDFHTF 64
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
P +L S + + + H QI+ G ++ P V T+L+N YS G D+ A ++FDE
Sbjct: 65 PFLLPSFHNPIHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCG-DLSSALRIFDESV 123
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+++ +W ++++ Y + G I +A LFD MP+R+V +W+ +I G G + +A+ FR
Sbjct: 124 SKDLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFRE 183
Query: 238 MGMEVSDNI--RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
M + + + PN+ T+ LSA G G L+ GK +H Y+ + G+++D + ALIDMY
Sbjct: 184 MQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMY 243
Query: 296 GKCGSLKEARRAFDR-NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
KCGSL+ A+R FD SKK + ++++MI A++G ++ VF EM +NI P+
Sbjct: 244 AKCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMT--TSNNINPNS 301
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
VTF+ +L AC H GL+ +G++YFK+MT+ + I P I+HYGC+VDL GR+G +EA +
Sbjct: 302 VTFVGILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIA 361
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M +EPD ++WGSLL+G ++ G E A+K+LIE+DP N G ++L+N+Y + G+W E
Sbjct: 362 SMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIE 421
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
V+++R ++ + K PGCS++EV+ VH+F D++ +E IY LE ++
Sbjct: 422 VKRIRHEMEVKGIKKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLEEIM 473
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 192/582 (32%), Positives = 302/582 (51%), Gaps = 82/582 (14%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
L +Q ++ L RC+ +N +KQ+ + + + +F KL+ +L +T A +F+
Sbjct: 16 LLEQKISDLHRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSL-CRQMTLAVNVFNQ 74
Query: 72 LTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
+ P+ LY +I A+ S+P AFS++ +M G N F YP +LK+C +
Sbjct: 75 IQDPDVLLYNTLIRAHVRNSEPL---LAFSVFFEMQDSGVCADN-FTYPFLLKACSGKVW 130
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGND------------------------ 165
R +M+H Q+ K GF V +L++SY + G D
Sbjct: 131 VRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMI 190
Query: 166 --------IGIARKLFDEMSDR-------------------------------NVVSWTA 186
+G AR+LFDEM +R NVVSW+
Sbjct: 191 GGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWST 250
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM---GMEVS 243
M+ GY++ GD+ A LFD MP +++ W +I+G + GL DAI+ + +M G++
Sbjct: 251 MVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFD 310
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
D T++ LSA +G+L LGK +H + R + +SNALIDMY KCGSL+
Sbjct: 311 DG------TVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLEN 364
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A F +K + SWN++I A+HG E ++ +F M + PD VTF+ +L A
Sbjct: 365 ALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRM---KGEGFVPDKVTFVGVLCA 421
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
CTH G V++G YF M + Y + P++EHYGC+VDLLGR GR +EA +V M +EP+ +
Sbjct: 422 CTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAI 481
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+WG+LL C+++ T AE +L++ + ++ G ML+NIY G WD +R +K
Sbjct: 482 IWGTLLGACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMK 541
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ K G S IEVD +VH+F D++HP+++ IY ++ +
Sbjct: 542 STSIQKPSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTIDGL 583
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 182/559 (32%), Positives = 296/559 (52%), Gaps = 44/559 (7%)
Query: 3 SVTNQLNQTLNQQVLAIL---ERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLK 58
S N+ L+Q+ + L + ++HLKQ+ + G Q ++ + LV+ +
Sbjct: 17 STENKFTSQLSQKTILDLLNTKSSTSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPH 76
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
SNL +A +F+++ PN +++ +I + Y+ M+ +PN+F YP
Sbjct: 77 FSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMI--AHARPNKFTYP 134
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSG--------------FEQYPVVE------------ 152
+ K+C + VH ++K G + + VE
Sbjct: 135 TLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNS 194
Query: 153 -----TALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM 207
A+++ Y + G ++ A++LF M D+NV SW M+SG + G I+ A LF+ M
Sbjct: 195 DVICFNAMIDGYLKCG-EVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEM 253
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
+++ +W+++I G + G + +A+ F M E IRP + L L+A + G L
Sbjct: 254 KEKNEISWSAMIDGYIKGGYYKEALEVFNVMQRE---EIRPRKFVLSSVLAACANLGALD 310
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFA 327
G+ IH YV N D+ + AL+DMY KCG L A F++ KK + +WN+MI
Sbjct: 311 QGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLG 370
Query: 328 LHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIE 387
+HG++E++I +F +M Q RP+G+T + +L+AC H G+V++G F M + Y IE
Sbjct: 371 MHGRAEDAIELFFKM---QKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIE 427
Query: 388 PQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKK 447
P +EHYGC+VDLLGRAG EA EV+ M +EP VWG+LL C+ +G + E K
Sbjct: 428 PGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKI 487
Query: 448 LIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHS 507
L+E++P N G +L+NIY G+WD+V VRK++K+R + G S I+ D VH+F
Sbjct: 488 LLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKM 547
Query: 508 LDKTHPRTEEIYDALESMV 526
D +HP+ + IY L++M+
Sbjct: 548 GDGSHPQMKNIYLMLKNMI 566
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/466 (35%), Positives = 280/466 (60%), Gaps = 10/466 (2%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQ-PQPNQFIYPHV 120
+ YAR IFD + +++ Y + S L+ +M ++ + PN +
Sbjct: 187 VNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESK-RLFIEMEKKCECVSPNSVTLVLM 245
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGF-EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
L +C + + G K ++ + +K G E ++E AL++ ++ G ++ AR +FDEM R
Sbjct: 246 LSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCG-EMDAARGVFDEMKTR 304
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
+V+SWT++++G+ I A FD MP+RD +W ++I G + F + ++ FR M
Sbjct: 305 DVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQ 364
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
M N++P++ T+V L+A H G L+LG+ Y+ +N + D+FI NALIDMY KCG
Sbjct: 365 M---SNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCG 421
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
++++A++ F+ KK +W +MI A +G E ++ +F M+ + ++ PD +T+I
Sbjct: 422 NVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYML---EASVTPDEITYIG 478
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
++ ACTH GLV +G+ +F M + I+P + HYGC+VDLLGRAG +EALEV+ M ++
Sbjct: 479 VMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVK 538
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVR 479
P+ +VWGSLL C+++ AE A +++E++P NG ++L NIY KW + VR
Sbjct: 539 PNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVR 598
Query: 480 KMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
KM+ +R K PGCS +E++ V++F + DK+HP+++EIY LE+M
Sbjct: 599 KMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENM 644
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/498 (24%), Positives = 216/498 (43%), Gaps = 79/498 (15%)
Query: 4 VTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NL 62
++N + + +++LE CN + + Q+ S G S + + K++ FC K S ++
Sbjct: 26 ISNTPLHSFVKSPISLLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDV 85
Query: 63 TYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
YAR +FD + P+ +++ MI Y S+ + S SLY+ M+ +P+ F +P +LK
Sbjct: 86 YYARKVFDEIPQPSVFIWNTMIKGY-SRINCSESGVSLYKLMLVH-NIKPDGFTFPFLLK 143
Query: 123 S-CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
D+ G +++ ++ + V+ ++ +S G + ARK+FD V
Sbjct: 144 GFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGL-VNYARKIFDMGDGWEV 202
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
V+W ++SGY R + + LF M +
Sbjct: 203 VTWNVVLSGYNRFKRYEESKRLFIEMEKK------------------------------- 231
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL-DLDSFISNALIDMYGKCGS 300
+ + PN VTLV LSA L GK I+ + G+ + + + NALIDM+ CG
Sbjct: 232 -CECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGE 290
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR---------------- 344
+ AR FD + + SW S++ FA + + + F++M
Sbjct: 291 MDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRM 350
Query: 345 ------------CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEH 392
Q N++PD T +S+L AC H G +E G KTY + +I++
Sbjct: 351 NRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGE-----WAKTYIDKNKIKN 405
Query: 393 ----YGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL 448
L+D+ + G E+A ++ M+ + D+ W +++ G G + A +
Sbjct: 406 DTFIGNALIDMYFKCGNVEKAKKIFNEMQ-KKDKFTWTAMIVGLANNGHGEEALTMFSYM 464
Query: 449 IE--IDPNNGGY-GIMLA 463
+E + P+ Y G+M A
Sbjct: 465 LEASVTPDEITYIGVMCA 482
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 288/522 (55%), Gaps = 39/522 (7%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL--KLSNLTYARFIFDHLT 73
+L+ ER + ++Q +F+ G F A KLV F + ++YA I + +
Sbjct: 12 ILSFTERAKSLLEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIE 71
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
+PN + + ++I AYA+ + A +++R+M+ G P+++ + VLK+C
Sbjct: 72 SPNGFTHNSVIRAYANS-STPEIALTVFREMLL-GPVFPDKYSFTFVLKACAAFCGFEEG 129
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGN---------------------------DI 166
+ +H +KS VE L+N Y RSG D
Sbjct: 130 RQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLDK 189
Query: 167 GI---ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCT 223
G+ AR LFDEM +RNV SW MISGY G +K A +FDSMP +DV +WN+++
Sbjct: 190 GLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYA 249
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL 283
G +++ + F M + ++ RP+ TLV LSA G L G+ +H Y+ ++G+++
Sbjct: 250 HVGCYNEVLEVFNMMLDDSAE--RPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEI 307
Query: 284 DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
+ F++ AL+DMY KCG + +A F SK+ +++WNS+I ++HG ++++ +F EM+
Sbjct: 308 EGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIFSEMV 367
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
+P+G+TFI +L+AC H GL++Q R F++M Y IEP IEHYGC+VDLLGR
Sbjct: 368 Y---EGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGRM 424
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLA 463
G+FEEA E+V + + ++ SLL CK +G+ + AE +L+E +P + ++
Sbjct: 425 GKFEEAEELVNEVPADEASILLESLLGACKRFGKLEQAERIANRLLESNPRESSGYVQMS 484
Query: 464 NIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
N+Y G+WDE +VR ++ K PGCS IEVD VH+F
Sbjct: 485 NLYASHGRWDEAMEVRGKMRAERVKKNPGCSMIEVDGVVHEF 526
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/487 (34%), Positives = 290/487 (59%), Gaps = 10/487 (2%)
Query: 42 SQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLY 101
S N Y++ + KL + AR +FD + + + M+ AYA + + A Y
Sbjct: 113 STRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYA-KSGFCNDALRFY 171
Query: 102 RDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSR 161
R++ R G N++ + +L C V E +K H Q++ +GF V+ ++++++Y++
Sbjct: 172 RELRRLGIGY-NEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAK 230
Query: 162 SGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAG 221
+++G AR+LFDEM R+V++WT M+SGY + GD++ A LFD MP+++ AW S+IAG
Sbjct: 231 C-SEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAG 289
Query: 222 CTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL 281
++ L A+ F +M ++ NIRP+Q T L A L GK IHGY+ R +
Sbjct: 290 YARHDLGHKALELFTKM---MALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNI 346
Query: 282 DLDSFISNALIDMYGKCGSLKEARRAFD-RNSKKRLTSWNSMINSFALHGQSENSICVFE 340
++ + ++LIDMY KCG L+ R FD K + WN++I+S A HG+ + +I +F+
Sbjct: 347 RPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFD 406
Query: 341 EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL 400
+M+R ++PD +T I LLNAC+H GLV++G ++ +T + + P EHY CL+DLL
Sbjct: 407 DMVRL---GMKPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLL 463
Query: 401 GRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI 460
GRAG F+ + ++ M +P++ +W +LL C+++G +F +K+IE+DP + +
Sbjct: 464 GRAGHFDTLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYV 523
Query: 461 MLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYD 520
+L++I+ +G+W+ V VR+++ +R+ K SWIE++ +VH F + D+ HP E IY
Sbjct: 524 LLSSIHAAVGRWELVENVRQLMNERHVRKDRAISWIEIENKVHSFTASDRLHPLKEVIYL 583
Query: 521 ALESMVA 527
AL+ +
Sbjct: 584 ALKQLAG 590
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 174/385 (45%), Gaps = 51/385 (13%)
Query: 93 HASSAFSLYRDMVRRGQPQPNQFIYP-----HVLKSCPDVLESRGTKMVHTQIVKSGFEQ 147
H SS L++ + G N P ++L+ C + + K VH + +G ++
Sbjct: 24 HLSSQGQLFQAISSLGLLSRNGIRLPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKR 83
Query: 148 -YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDS 206
+ L+N YS+ G D A K+FDEMS RN+ SW M+SGY ++G IK A LFD
Sbjct: 84 PNTFLANHLINMYSKCG-DYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDK 142
Query: 207 MPDRDVPAWNSVIAGCTQNGLFSDAISFF---RRMGMEVSDNIRPNQVTLVCALSAIGHT 263
MP++DV +WN+++ ++G +DA+ F+ RR+G I N+ + L+
Sbjct: 143 MPEKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLG------IGYNEYSFAGLLNICVKV 196
Query: 264 GMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR------------- 310
L+L K HG V G + IS++++D Y KC + +ARR FD
Sbjct: 197 KELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMV 256
Query: 311 ------------------NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
+K +W S+I +A H ++ +F +MM NIRP
Sbjct: 257 SGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMAL---NIRP 313
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
D TF S L A + G+ + +T I P L+D+ + G E V
Sbjct: 314 DQFTFSSCLCASASIASLNHGKQIHGYLIRT-NIRPNTIVVSSLIDMYSKCGCLEVGRLV 372
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGR 437
M + D V+W ++++ +GR
Sbjct: 373 FDLMGDKWDVVLWNTIISSLAQHGR 397
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/515 (34%), Positives = 296/515 (57%), Gaps = 11/515 (2%)
Query: 13 NQQVLAILER-CNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
+Q L++L++ C + LK++ S L G ++ A +++ FC ++ YA +F
Sbjct: 21 DQTYLSMLDKNCTTMKDLKKIHSQLIKTGLAKDTNAASRILAFCASPAGDINYAYLVFVQ 80
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV-LES 130
+ PN + + +I + S+ + ++ SLY DM+ QP + YP V K+ + L S
Sbjct: 81 IQNPNIFAWNTIIRGF-SRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFKAFAQLDLAS 139
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
G ++ H +++K G E + ++ Y G ARK+FD D ++V+W MI G
Sbjct: 140 EGAQL-HGKMIKLGLENDSFIRNTILFMYVNCGF-TSEARKVFDRGMDFDIVAWNTMIMG 197
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
+ G + + LFD M R+ +WNS+I+G +NG F DA+ F++M +E I P++
Sbjct: 198 VAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVE---RIEPSE 254
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
T+V L+A G ++ G+ IH Y+ + +L+ + A+IDMY KCGS+ +A + F
Sbjct: 255 FTMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQS 314
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
++ L+ WNSMI A++GQ ++ +F + Q ++RPD V+FI++L AC H G+V
Sbjct: 315 APRRGLSCWNSMILGLAMNGQENEALQLFSVL---QSSDLRPDDVSFIAVLTACDHTGMV 371
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
++ + YF LM Y+I+P I+H+ C+VD+LGRAG EEA E+++ M ++PD ++WGSLL
Sbjct: 372 DKAKDYFLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELIRSMHVDPDAIIWGSLLW 431
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
C YG A+ A LIE++P+ +++AN Y ++E K R LK+ + K
Sbjct: 432 SCCKYGNIKMAKRAANHLIELNPSESSSFVLVANAYAAANNFEEALKERLTLKENHIGKE 491
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PGCS IEV +VH+F + + HP +EIY L+ +
Sbjct: 492 PGCSCIEVGGEVHEFVAGGRAHPEIKEIYRVLDVL 526
>gi|356574121|ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/518 (34%), Positives = 304/518 (58%), Gaps = 13/518 (2%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFD 70
++ +L++L++C I LKQL + + + G SQ + + K++ F L S ++ Y+ +F
Sbjct: 13 ISHNLLSLLDKCKSILELKQLHAVVISCGLSQDDPFISKILCFSALSNSGDINYSYRVFS 72
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
L++P + + +I Y S + + S++ M+R G P+ YP ++K+ +L
Sbjct: 73 QLSSPTIFSWNTIIRGY-SNSKNPIQSLSIFLKMLRLGVA-PDYLTYPFLVKASARLLNQ 130
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
VH I+K+G E ++ +L++ Y+ GN + A+K+FD + +NVVSW +M+ G
Sbjct: 131 ETGVSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMW-AQKVFDSIQQKNVVSWNSMLDG 189
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y + G++ A F+SM ++DV +W+S+I G + G +S+A++ F +M S + N+
Sbjct: 190 YAKCGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQ---SAGPKANE 246
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
VT+V A H G L+ G++I+ Y+ NGL L + +L+DMY KCG+++EA F R
Sbjct: 247 VTMVSVSCACAHMGALEKGRMIYKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLIFRR 306
Query: 311 NSKKR--LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
SK + + WN++I A HG E S+ +F+EM Q I PD VT++ LL AC HGG
Sbjct: 307 VSKSQTDVLIWNAVIGGLATHGLVEESLKLFKEM---QIVGICPDEVTYLCLLAACAHGG 363
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
LV++ +F+ ++K + P EHY C+VD+L RAG+ A + + M EP + G+L
Sbjct: 364 LVKEAWFFFESLSKC-GMTPTSEHYACMVDVLARAGQLTTAYQFICQMPTEPTASMLGAL 422
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L+GC + AE +KLIE++PN+ G I L+N+Y +WD+ R +R+ ++ R
Sbjct: 423 LSGCINHRNLALAEIVGRKLIELEPNHDGRYIGLSNMYAVDKRWDDARSMREAMERRGVK 482
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K+PG S++E+ +H+F + DKTHP +EE Y L +V
Sbjct: 483 KSPGFSFVEISGVLHRFIAHDKTHPDSEETYFMLNFVV 520
>gi|449445234|ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 542
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/518 (34%), Positives = 303/518 (58%), Gaps = 13/518 (2%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFD 70
LNQ ++++L+ C + LK++ + L TLG SQ KL+ F L + +L Y+ +
Sbjct: 12 LNQTLISLLDGCKSMFELKRIHALLFTLGISQDETIKSKLLLFSALSPARDLDYSYKLIL 71
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
++ P T+ + +I A+ S + + + +++ M++ G P+ YP ++K+ +L
Sbjct: 72 NVPNPTTFNWNTLIRAF-SNTKNPNPSITVFIKMLQNGV-SPDYLTYPFLVKATSKLLNQ 129
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
VH IVKSG E ++ +L++ Y+ S DI ARK+FDEM +N+V+W AM+ G
Sbjct: 130 ELGMAVHVHIVKSGHEIDKFIQNSLIHMYA-SCRDIASARKVFDEMPRKNLVTWNAMLDG 188
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y + GD+ A +F+ MP++DV +W+S+I G + ++ +A++ F RM D N+
Sbjct: 189 YAKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSF---DGPMANE 245
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
VTLV AL A H G L+ G+++H Y+ N L L + +L+DMY KCG++ EA F
Sbjct: 246 VTLVSALCACAHLGALEHGRMMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEALTVFRA 305
Query: 311 NSKKR--LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
S + + WN++I A HG + ++ +F EM I PD +T++ LL+ C HGG
Sbjct: 306 CSLQEADVLIWNAIIGGLATHGLIKEAMNLFCEMKMV---GIVPDEITYLCLLSCCAHGG 362
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
LVE+ +F + K I P++EHY C+VD L RAG+ EA + + M ++P + G+L
Sbjct: 363 LVEEAWYFFDCLRKHGMI-PKVEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSMLGAL 421
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L+GC +G+ D A+ ++L+E+DPN+ G + L+NIY +WD+ + +R+ ++ +
Sbjct: 422 LSGCMKHGKLDIAKVVGRRLVELDPNHDGRYVGLSNIYAADKRWDDAKNIREAMERKGVK 481
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K+PG S+IEV +H+F + DKTH E+I+ L +V
Sbjct: 482 KSPGFSFIEVYGVLHRFMAHDKTHGDCEQIFMMLNLIV 519
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/494 (34%), Positives = 284/494 (57%), Gaps = 42/494 (8%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
KQL + + +G S A KLV + ++LT A +FD ++ N +L+ MI YA
Sbjct: 21 KQLHARICQVGISFNPLLATKLVNLYCI-CNSLTNAHLLFDRISKRNLFLWNVMIRGYAW 79
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
+ A SLY M G P++F +P VLK+C + K +H +++SG E
Sbjct: 80 NGPY-ELAISLYYQMRDYGLV-PDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDV 137
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
V AL++ Y++ G +++A +FD + +
Sbjct: 138 FVGAALIDMYAK--------------------------------CGCVESARQVFDKIDE 165
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
RDV WNS++A +QNG ++++ R M + ++P + T V +++A G+L G
Sbjct: 166 RDVVCWNSMLATYSQNGQPDESLALCRVMAF---NGLKPTEGTFVISIAASADNGLLPQG 222
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
K +HGY +R+G + + + AL+DMY K GS+ AR F+ +KR+ SWN+MI +A+H
Sbjct: 223 KELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMH 282
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
G + ++ +F+EM + PD +TF+ +L AC+HGGL+ +G+ +F+ M + I P
Sbjct: 283 GHANEALDLFKEM----KGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPT 338
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
++HY C++DLLG GR EEA +++ M++EPD VWG+LL+ CKI+G + E A++KL+
Sbjct: 339 VQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLV 398
Query: 450 EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLD 509
E++P++GG ++L+N+Y + GKWD V ++R ++ ++ K+ CSWIEV +VH F S D
Sbjct: 399 ELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSED 458
Query: 510 KTHPRTEEIYDALE 523
+HP++E IY L+
Sbjct: 459 TSHPKSEAIYAELK 472
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 7/200 (3%)
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
++ GK +H + + G+ + ++ L+++Y C SL A FDR SK+ L WN MI
Sbjct: 17 IEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRG 76
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
+A +G E +I ++ +M +D+ + PD TF +L AC+ +E+G+ K + ++
Sbjct: 77 YAWNGPYELAISLYYQM---RDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRS-G 132
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD--FAEF 443
+E + L+D+ + G E A +V + E D V W S+L G+ D A
Sbjct: 133 LESDVFVGAALIDMYAKCGCVESARQVFDKID-ERDVVCWNSMLATYSQNGQPDESLALC 191
Query: 444 AVKKLIEIDPNNGGYGIMLA 463
V + P G + I +A
Sbjct: 192 RVMAFNGLKPTEGTFVISIA 211
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/472 (37%), Positives = 278/472 (58%), Gaps = 13/472 (2%)
Query: 55 CTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQ 114
C L LS AR +FD ++ + +MI Y S+ A L+++M++ G + +
Sbjct: 185 CRLILS----ARQVFDDISDRTIVSWNSMIAGY-SKMGFCDEAILLFQEMLQLG-VEADV 238
Query: 115 FIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
F +L + + VH IV +G E +V AL++ Y++ G+ + A+ +FD
Sbjct: 239 FTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGH-LQFAKHVFD 297
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
+M D++VVSWT+M++ Y G ++NA +F+ MP ++V +WNS+I Q G +++A+
Sbjct: 298 QMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVEL 357
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
F RM + + P+ TLV LS +TG L LGK H Y+ N + + + N+LIDM
Sbjct: 358 FHRMCIS---GVMPDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSLIDM 414
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KCG+L+ A F +K + SWN +I + ALHG E +I +F+ M Q + PD
Sbjct: 415 YAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSM---QASGLYPDE 471
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
+TF LL+AC+H GLV+ GR YF +M T+RI P +EHY C+VDLLGR G EA+ +++
Sbjct: 472 ITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQ 531
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M ++PD VVWG+LL C+IYG + A+ +K+L+E+ N G ++L+N+Y E +WD+
Sbjct: 532 KMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQRWDD 591
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
++K+RK++ D K S+IE+D +QF DK H + IY L+ ++
Sbjct: 592 MKKIRKIMDDSGIKKCRAISFIEIDGCCYQFMVDDKRHCASTGIYSILDQLM 643
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 11/267 (4%)
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
VV+ ++S + GD++ A LFD +P + +N +I G + + ++ FR+M
Sbjct: 70 QVVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQM- 128
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
VS PNQ T L A ++H + G+ + + NA++ Y C
Sbjct: 129 --VSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACR 186
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
+ AR+ FD S + + SWNSMI ++ G + +I +F+EM++ + D T +S
Sbjct: 187 LILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQL---GVEADVFTLVS 243
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
LL+A + ++ GR + L +E L+D+ + G + A V M ++
Sbjct: 244 LLSASSKHCNLDLGR-FVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQM-LD 301
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVK 446
D V W S++N Y E AV+
Sbjct: 302 KDVVSWTSMVNA---YANQGLVENAVQ 325
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 178/520 (34%), Positives = 295/520 (56%), Gaps = 16/520 (3%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL-SNLTYARFI 68
+ +++ L +LE+C ++NHLKQ + + T G F +L+ FC+ +LTYA +
Sbjct: 2 SSCSKRCLVLLEKCKNVNHLKQAHAQVFTTGLDTNTFALSRLLAFCSHPYQGSLTYACRV 61
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
F+ + P + +I + + F ++ M+ G P+ + P+VLK+C +
Sbjct: 62 FERIHHPTLCICNTIIKTFLVN-GNFYGTFHVFTKMLHNGL-GPDNYTIPYVLKACAALR 119
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ KMVH K G V +L+ YS G D+ AR +FDEM + VSW+ MI
Sbjct: 120 DCSLGKMVHGYSSKLGLVFDIFVGNSLMAMYSVCG-DVIAARHVFDEMPRLSAVSWSVMI 178
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
SGY +VGD+ +A FD P++D W ++I+G QN F + + FR + + ++ P
Sbjct: 179 SGYAKVGDVDSARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLT---HVVP 235
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
++ V LSA H G L +G IH Y+ R + L +S +L+DMY KCG+L+ A+R F
Sbjct: 236 DESIFVSILSACAHLGALDIGIWIHRYLNRKTVSLSIRLSTSLLDMYAKCGNLELAKRLF 295
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
D ++ + WN+MI+ A+HG +++ +F EM + I+PD +TFI++ AC++ G
Sbjct: 296 DSMPERDIVCWNAMISGLAMHGDGASALKMFSEM---EKTGIKPDDITFIAVFTACSYSG 352
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI-----EPDEV 423
+ +G M+ Y IEP+ EHYGCLVDLL RAG F EA+ +++ + + +
Sbjct: 353 MAHEGLQLLDKMSSLYEIEPKSEHYGCLVDLLSRAGLFGEAMVMIRRITSTSWNGSEETL 412
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
W + L+ C +G+ AE A K+L+ ++ ++G Y ++L+N+Y GK + R+VR M++
Sbjct: 413 AWRAFLSACCNHGQAQLAERAAKRLLRLENHSGVY-VLLSNLYAASGKHSDARRVRNMMR 471
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
++ K PGCS +E+D V +F + ++THP+ EEI+ LE
Sbjct: 472 NKGVDKAPGCSSVEIDGVVSEFIAGEETHPQMEEIHSVLE 511
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/493 (34%), Positives = 282/493 (57%), Gaps = 12/493 (2%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFDHLT 73
+L+ E I+ L Q + + G + F A +L+ + + YA IF +
Sbjct: 10 ILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIP 69
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
PN+Y++ +I AYA+ P +A +++ M+ P+++ + LKSC
Sbjct: 70 NPNSYMWNTIIRAYANSPT-PEAALTIFHQMLH-ASVLPDKYTFTFALKSCGSFSGVEEG 127
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+ +H ++K+G ++ L++ Y+ G I AR L D M +R+VVSW A++S Y
Sbjct: 128 RQIHGHVLKTGLGDDLFIQNTLIHLYASCGC-IEDARHLLDRMLERDVVSWNALLSAYAE 186
Query: 194 VGDIKNAAS-LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
G ++ A+ +F P ++V +WN++I G + G FS+ + F M ++P+ T
Sbjct: 187 RGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQ---HAGVKPDNCT 243
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
LV LSA H G L G+ +H Y+ +NG+ +D F++ AL+DMY KCGS+++A F+
Sbjct: 244 LVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCL 303
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+K +++WNS+I+ + HG ++++ +F EM+ +P+ VTF+ +L+AC+ GL+++
Sbjct: 304 RKDISTWNSIISGLSTHGSGQHALQIFSEMLV---EGFKPNEVTFVCVLSACSRAGLLDE 360
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
GR F LM + I+P IEHYGC+VDLLGR G EEA E+V+ M + VVW SLL C
Sbjct: 361 GREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGAC 420
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+ +G + AE +KL+E+ P + L+N+Y +G+W +V +VR+ ++ + K PG
Sbjct: 421 RNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPG 480
Query: 493 CSWIEVDKQVHQF 505
CS IEVD V++F
Sbjct: 481 CSMIEVDGTVYEF 493
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 184/508 (36%), Positives = 293/508 (57%), Gaps = 16/508 (3%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPN--TYLYTAM 83
++ L+Q+ + + T S L+ C L N AR +FDH +P+ L+ M
Sbjct: 87 LSPLQQIHAQVVTQALSSNASLTASLIH-CYLCAKNHPNARILFDHYPSPSPPIKLWNVM 145
Query: 84 ITAYASQPAHASSAFSLYRDMVRRGQPQ---PNQFIYPHVLKSCPDVLESRGTKMVHTQI 140
I Y S+ ++ L+ M+ P P+++ + V+ SC + ++VH +
Sbjct: 146 IRTY-SKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISLIYGEIVHGMV 204
Query: 141 VKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
VKSGFE V +++N S + ARK+F++MS+R+V SWT+++ GY + G++ A
Sbjct: 205 VKSGFESNLYVGNSVINMCSVFAR-MEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRA 263
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
LF+ MP R+ +W +I+G G + +A++FF M D + PN+ LVC LSA
Sbjct: 264 CELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFF--CNMLCDDRVNPNEAVLVCVLSAC 321
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
H G L G IH Y+ + G+ S IS ALIDMY KCG + A R F+ K+ + S+
Sbjct: 322 AHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFT 381
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
SMI+ + HG ++++ VF +M+ D N+ P+ +T + +LN C+H GLVE+G + M
Sbjct: 382 SMISGLSYHGLGKDALRVFYQML---DENVMPNEITILGVLNGCSHSGLVEEGSSILANM 438
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+ I P+IEHYGC +DLLGRAG E ALEVVK M +EPD V+W +LL+ +I+ +
Sbjct: 439 ESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLSASRIHHNVNL 498
Query: 441 AEFAVKKL--IEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV 498
E + + ++ +NGG ++L+N+Y LG+W+ V ++RK++ DR + +PGCSWIEV
Sbjct: 499 GEQIISHIGQLKSSDHNGG-EVLLSNLYASLGRWERVTEMRKLMVDRRSESSPGCSWIEV 557
Query: 499 DKQVHQFHSLDKTHPRTEEIYDALESMV 526
+ VH+F D+ HP+ EI + L ++
Sbjct: 558 NGLVHEFRVADQLHPQIVEIRNKLNEIL 585
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 174/512 (33%), Positives = 295/512 (57%), Gaps = 10/512 (1%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L + + + NH ++ + LG F L+ + AR +FD + P
Sbjct: 127 LLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYA-SCRRIMDARLLFDKMCHP 185
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ + +I Y Q H A L+ DM R +P+ I VL +C +
Sbjct: 186 DAVAWNMIIDGYC-QNGHYDDALRLFEDM-RSSDMKPDSVILCTVLSACGHAGNLSYGRT 243
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+H + +G+ ++TAL+N Y+ G + +ARK++D +S ++++ TAM+SGY ++G
Sbjct: 244 IHEFVKDNGYAIDSHLQTALINMYANCGA-MDLARKIYDGLSSKHLIVSTAMLSGYAKLG 302
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
+K+A +FD M +RD+ W+++I+G ++ +A+ F M + S P+Q+T++
Sbjct: 303 MVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRS---VPDQITMLS 359
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
+SA H G L IH YV R+G ++NALIDMY KCG+L +AR F+ +K
Sbjct: 360 VISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKN 419
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
+ SW+SMIN+FA+HG ++++I +F M ++ NI P+GVTFI +L AC H GLVE+G
Sbjct: 420 VISWSSMINAFAMHGNADSAIKLFRRM---KEVNIEPNGVTFIGVLYACGHAGLVEEGEK 476
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
F M + I P EHYGC+VDL RA +A+E+++ M P+ ++WGSL++ C+++
Sbjct: 477 LFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVH 536
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
G + EFA K+L+E++P++ G ++L+NIY + +W++V +RK + + K S
Sbjct: 537 GEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSR 596
Query: 496 IEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
IE++ QVH F D+ H +++EIY+ L+ +V+
Sbjct: 597 IEINNQVHMFMMADRYHKQSDEIYEKLDEVVS 628
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 206/475 (43%), Gaps = 80/475 (16%)
Query: 28 HLKQL--QSFLTTLGQSQTNFYAFKLV---RFCTLKLSNLTYARFIFDHLTTPNTYLYTA 82
HLKQ+ Q + TN KL + S+L YA +F + P+T+ ++
Sbjct: 31 HLKQIHAQILHSNTTPENTNTLLSKLALSICTLSSSSSSLHYALSVFSQIPNPHTH-FSN 89
Query: 83 MITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVK 142
+ + S+ + LY ++ ++F +P +LK+ V +H K
Sbjct: 90 QLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASK 149
Query: 143 SGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAAS 202
GF P ++T L+ Y+ S I AR LFD+M + V+W +I GY + G +A
Sbjct: 150 LGFVDDPFIQTGLIAMYA-SCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALR 208
Query: 203 LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGH 262
LF+ M D ++P+ V L LSA GH
Sbjct: 209 LFEDMRSSD----------------------------------MKPDSVILCTVLSACGH 234
Query: 263 TGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL--------------------- 301
G L G+ IH +V NG +DS + ALI+MY CG++
Sbjct: 235 AGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAM 294
Query: 302 ----------KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIR 351
K+AR FD+ ++ L W++MI+ +A Q + ++ +F+EM+ Q ++
Sbjct: 295 LSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEML--QKRSV- 351
Query: 352 PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALE 411
PD +T +S+++AC+H G + Q + ++ + L+D+ + G +A E
Sbjct: 352 PDQITMLSVISACSHVGALAQANWIHTYVDRS-GFGRALSVNNALIDMYAKCGNLVKARE 410
Query: 412 VVKGMKIEPDEVVWGSLLNGCKIYGRTDFA--EFAVKKLIEIDPNNGGY-GIMLA 463
V + M + + W S++N ++G D A F K + I+PN + G++ A
Sbjct: 411 VFENMP-RKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYA 464
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 193/518 (37%), Positives = 291/518 (56%), Gaps = 17/518 (3%)
Query: 15 QVLAILERCNHINHLKQLQSFL--TTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
+ +++L C+ +L + + T L + AF+L R L + +
Sbjct: 291 RAVSLLTSCSTARRAAELHAAVLRTGLLDATDRAVAFRLQRAYAAS-GRLDLSLALLRRT 349
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
P YT+ I A++S+ H A +L DM+ +G P L +C + R
Sbjct: 350 RDPTAIFYTSAIHAHSSR-GHRLPALALLSDMLAQGL-LPTAHTLSASLPACRGLSPGRA 407
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM-SDRNVVSWTAMISGY 191
+H K V TAL+ Y+R+G D AR LFD+M D +VVS TAM++ Y
Sbjct: 408 ---LHGYAFKLALAGDSYVATALLGMYARAG-DATAARALFDDMLPDPHVVSVTAMLTCY 463
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
+G + +A SLFD +P +D WN++I G TQ+G ++A+ FRRM + + P++V
Sbjct: 464 ADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRM---LGSGVEPDEV 520
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNG-LDLDSFISNALIDMYGKCGSLKEARRAFDR 310
T+V LSA+ G ++ GK +H YV + + L + ALIDMY KCGSL +A F
Sbjct: 521 TVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHG 580
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
K + WN+MIN +A+HG S ++ +F ++ ++ + P +TFI LLNAC+H G+V
Sbjct: 581 IGDKDIVVWNAMINGYAMHGDSRKALEMF---VQSREQGLWPTDITFIGLLNACSHSGMV 637
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
E+GR +F+ M + Y I+P+IEHYGC+VDLLGRAG +EA +V+ MKI PD V+W SLL
Sbjct: 638 EEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLA 697
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
C+++ + L+ N G I+L+NIY +G W EV +VR M+K K
Sbjct: 698 ACRLHKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKE 757
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
PGCS IE+D++V++F + D +HPRT+EIY L+ M L
Sbjct: 758 PGCSSIEIDREVYEFVAGDMSHPRTDEIYVMLDKMNGL 795
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 185/484 (38%), Positives = 268/484 (55%), Gaps = 42/484 (8%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
+ YA +F H+T P+T+++ MI A P+ +A SLY M G +P++F +P VL
Sbjct: 28 MAYAHQLFPHITEPDTFMWNTMIRGSAQSPS-PLNAISLYSQM-ENGCVRPDKFTFPFVL 85
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVE----------------------------- 152
K+C + + VH ++ + GFE V
Sbjct: 86 KACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVV 145
Query: 153 --TALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR 210
+AL Y+R G ++G+AR+LFDEM +++VSW MI+GY + G++++A LFD +P R
Sbjct: 146 AWSALTAGYARRG-ELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKR 204
Query: 211 DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK 270
DV WN++IAG G A+ F M S P++VT++ LSA G L G+
Sbjct: 205 DVVTWNAMIAGYVLCGSNQQALEMFEEMR---SVGELPDEVTMLSLLSACTDLGDLDAGQ 261
Query: 271 VIHGYVYRNGL-DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
IH + G DL + NALIDMY KCGS+ A F +K +++WNS++ A H
Sbjct: 262 RIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFH 321
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
G +E SI +F EM + + IRPD +TF+ +L AC+H G VE+GR YF LM Y IEP
Sbjct: 322 GHAEKSIHLFTEMRKLK---IRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPN 378
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
I HYGC+VDLLGRAG EA + + MKIEP+ +VW +LL C+I+G + A +L+
Sbjct: 379 IRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLL 438
Query: 450 EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLD 509
++ + G ++L+NIY G+WD V KVRK++ D K GCS IE D + H L
Sbjct: 439 KMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIEGDNKA-LMHFLF 497
Query: 510 KTHP 513
+ P
Sbjct: 498 DSKP 501
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 156/352 (44%), Gaps = 68/352 (19%)
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + A LF + + D WN++I G Q+ +AIS + +M + +RP++ T
Sbjct: 26 GTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQME---NGCVRPDKFTFP 82
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK- 313
L A +++G +HG V+R G + ++F+ N LI + CG L AR FD ++K
Sbjct: 83 FVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKR 142
Query: 314 ------------------------------KRLTSWNSMINSFALHGQSENSICVFEEMM 343
K L SWN MI +A G+ E++ +F+E+
Sbjct: 143 DVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVP 202
Query: 344 R---------------CQDHN--------IR-----PDGVTFISLLNACTHGGLVEQGRA 375
+ C + +R PD VT +SLL+ACT G ++ G+
Sbjct: 203 KRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQR 262
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
+++ + + L+D+ + G ALEV +GM+ E D W S+L G +
Sbjct: 263 IHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMR-EKDVSTWNSVLGGLAFH 321
Query: 436 GRTD--FAEFAVKKLIEIDPNNGGY-GIMLANIYGELGKWDEVRKVRKMLKD 484
G + F + ++I P+ + G+++A + G+ +E R+ +++D
Sbjct: 322 GHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHA--GRVEEGRQYFDLMRD 371
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 134/303 (44%), Gaps = 21/303 (6%)
Query: 40 GQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFS 99
G ++ + A+ + + L AR +FD + + + MIT YA + SA
Sbjct: 138 GSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKR-GEMESARK 196
Query: 100 LYRDMVRRGQPQPNQFIYPHVL-KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNS 158
L+ ++ +R N I +VL S LE + ++ G V +L+++
Sbjct: 197 LFDEVPKRDVVTWNAMIAGYVLCGSNQQALE------MFEEMRSVGELPDEVTMLSLLSA 250
Query: 159 YSRSGNDIGIARKL---FDEMS--DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVP 213
+ G D+ +++ EM D +V+ A+I Y + G I A +F M ++DV
Sbjct: 251 CTDLG-DLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVS 309
Query: 214 AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH 273
WNSV+ G +G +I F M IRP+++T V L A H G ++ G+
Sbjct: 310 TWNSVLGGLAFHGHAEKSIHLFTEMR---KLKIRPDEITFVGVLVACSHAGRVEEGRQYF 366
Query: 274 GYVYRNGLDLDSFISN--ALIDMYGKCGSLKEARRAFDR-NSKKRLTSWNSMINSFALHG 330
+ R+ +++ I + ++D+ G+ G L EA D + W +++ + +HG
Sbjct: 367 D-LMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHG 425
Query: 331 QSE 333
E
Sbjct: 426 NVE 428
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 175/483 (36%), Positives = 268/483 (55%), Gaps = 38/483 (7%)
Query: 45 NFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM 104
N A KL+ C +N+ A IF HL +PN + + A + A A Q +H A +
Sbjct: 24 NLIAVKLIGACA-DHANVRQAALIFAHLASPNIFAHNATLKALA-QNSHWFHAIQFFNHQ 81
Query: 105 VRR-GQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSG 163
V P P++F + VLK+C + + +H + K GFE V +L++ Y ++G
Sbjct: 82 VSSPNAPNPDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAG 141
Query: 164 NDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCT 223
+ +AR LFDEM R DR+V WN++IAG
Sbjct: 142 Y-LLLARHLFDEMFVR-----------------------------DRNVVCWNAMIAGYA 171
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL 283
QN +SDAI FR M + + PN VTLV L A H G L LGK I G++ R + L
Sbjct: 172 QNEKYSDAIEVFRMM--QQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREMAL 229
Query: 284 DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
F+ NAL DMY KCG + EARR F++ ++ + SW+ +I A++G ++ + F EM+
Sbjct: 230 GLFLGNALADMYAKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEML 289
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
C + +P+ V F+ LL ACTH GLV++G F M K Y + P++EHYGC+VDLL RA
Sbjct: 290 DCGE---KPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRA 346
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLA 463
G ++A +++ M ++P+ ++WG+LL GC+IY + + V+ ++E+D ++ G + LA
Sbjct: 347 GELDKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQRVVQHILELDSDHSGSYVYLA 406
Query: 464 NIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
N+Y +G+ D+ K R +++ KTPGCSWIEVD VH+F D +HP + +IY +
Sbjct: 407 NVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIEVDNTVHEFFMGDLSHPESNKIYSMIR 466
Query: 524 SMV 526
++
Sbjct: 467 ELM 469
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 124/266 (46%), Gaps = 8/266 (3%)
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
D N+++ +I +++ AA +F + ++ A N+ + QN + AI FF
Sbjct: 22 DPNLIA-VKLIGACADHANVRQAALIFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNH 80
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
+ + P++ T L A + G+ IH V + G + + F+ N+LIDMY K
Sbjct: 81 Q-VSSPNAPNPDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFK 139
Query: 298 CGSLKEARRAFDRN--SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
G L AR FD + + WN+MI +A + + ++I VF M Q + P+ V
Sbjct: 140 AGYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQ--QFGGVVPNDV 197
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
T +S+L AC H G ++ G+ +++ + + L D+ + G EA V
Sbjct: 198 TLVSVLPACAHLGALDLGKWIDGFISRR-EMALGLFLGNALADMYAKCGCITEARRVFNK 256
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFA 441
M+ E D + W ++ G +YG D A
Sbjct: 257 ME-ERDVISWSIIICGLAMYGHADEA 281
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 107/259 (41%), Gaps = 16/259 (6%)
Query: 18 AILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
++L+ C + H+ +++ + +T G F L+ K L AR +FD +
Sbjct: 97 SVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDM-YFKAGYLLLARHLFDEMFV 155
Query: 75 P--NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
N + AMI YA Q S A ++R M + G PN VL +C +
Sbjct: 156 RDRNVVCWNAMIAGYA-QNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDL 214
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
K + I + + AL + Y++ G I AR++F++M +R+V+SW+ +I G
Sbjct: 215 GKWIDGFISRREMALGLFLGNALADMYAKCGC-ITEARRVFNKMEERDVISWSIIICGLA 273
Query: 193 RVGDIKNAASLFDSMPD-----RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
G A F M D DV + ++ CT GL ++ F M E +
Sbjct: 274 MYGHADEAFGCFYEMLDCGEKPNDV-VFMGLLTACTHAGLVKKGLNCFNTMDKEYG--VS 330
Query: 248 PNQVTLVCALSAIGHTGML 266
P C + + G L
Sbjct: 331 PKVEHYGCVVDLLSRAGEL 349
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 177/512 (34%), Positives = 293/512 (57%), Gaps = 28/512 (5%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
LN +L L++C+++N LKQ+ + + T G S +Y L+ + S TYA IF+H
Sbjct: 4 LNHPILQKLQKCHNLNTLKQVHAQMLTTGLSFQTYYLSHLLNTSSKFAS--TYAFTIFNH 61
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ P +LY +I++ AFSLY ++ QPN F +P + K+C +
Sbjct: 62 IPNPTLFLYNTLISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACASHPWLQ 121
Query: 132 GTKMVHTQIVKSGFEQY-PVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
+H ++K Y P V+ +L+N Y++ G + ++R LFD++S+ ++ +W M++
Sbjct: 122 HGPPLHAHVLKFLQPPYDPFVQNSLLNFYAKYGK-LCVSRYLFDQISEPDLATWNTMLAA 180
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y + + ++ F+ D D+ +A+ F M + I+PN+
Sbjct: 181 YAQSASHVSYSTSFE---DADMSL---------------EALHLFCDMQL---SQIKPNE 219
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
VTLV +SA + G L G HGYV RN L L+ F+ AL+DMY KCG L A + FD
Sbjct: 220 VTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDE 279
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
S + +N+MI FA+HG ++ ++ M+ +D + PDG T + + AC+HGGLV
Sbjct: 280 LSDRDTFCYNAMIGGFAVHGHGNQALELYRN-MKLED--LVPDGATIVVTMFACSHGGLV 336
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
E+G F+ M + +EP++EHYGCL+DLLGRAGR +EA E ++ M ++P+ ++W SLL
Sbjct: 337 EEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPMKPNAILWRSLLG 396
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
K++G + E A+K LIE++P G ++L+N+Y +G+W++V++VR ++KD K
Sbjct: 397 AAKLHGNLEMGEAALKHLIELEPETSGNYVLLSNMYASIGRWNDVKRVRMLMKDHGVDKL 456
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
PG S +E++ +H+F + DK HP ++EIY +
Sbjct: 457 PGFSLVEINGAMHEFLTGDKAHPFSKEIYSKI 488
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 160/469 (34%), Positives = 284/469 (60%), Gaps = 10/469 (2%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + A+ +FD N LY +++ YA Q A A ++ +M+++G P+P++
Sbjct: 278 MKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQ-GLAREALAILDEMLQQG-PRPDRVT 335
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ + +++ K+ H ++++G E + + +++ Y + G +A ++FD M
Sbjct: 336 MLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKP-EMACRVFDLM 394
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
S++ VVSW ++ +G+ R GD+++A +F+ +P+R+ WN++I+G Q LF DAI FR
Sbjct: 395 SNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFR 454
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M E I+ ++VT++ SA G+ G +L K +H Y+ +NG+ D ++ AL+DM+
Sbjct: 455 EMQGE---GIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFA 511
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
+CG + A + F++ +++ +++W + I + A+ G E + +F +M+ ++PD V
Sbjct: 512 RCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLI---QGVKPDVVL 568
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
F+ +L AC+HGG VEQG F LM + + I PQIEHYGC+VDLLGRAG EA +++K M
Sbjct: 569 FVQVLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSM 627
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
+EP++VVWGSLL C+++ + A +A +++ E+ P G ++L+NIY GKW +V
Sbjct: 628 PMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVA 687
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+VR L+++ K PG S ++V+ +H+F S D++HP I L+ M
Sbjct: 688 RVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEM 736
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 187/423 (44%), Gaps = 57/423 (13%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS--NLTYARFIF-----DHL 72
L C +N LKQL +T G Q KLV S +L YAR F D
Sbjct: 32 LRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVR 91
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
+ ++ ++I Y+S A LY M+ G PN + +P VL C +
Sbjct: 92 SDDALFMLNSLIRGYSS-AGLGREAILLYVRMLVLG-VTPNHYTFPFVLSGCTKIAAFCE 149
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
VH +VK G E+ ++ L++ Y+ G+
Sbjct: 150 GIQVHGSVVKMGLEEDVFIQNCLIHFYAECGH---------------------------- 181
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
+ + +F+ M +R+V +W S+I G + +A+S F M V IRP+ VT
Sbjct: 182 ----MDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEM---VEAGIRPSSVT 234
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
+VC +SA L +G+ + Y+ GL L+ + NAL+DMY KCG++ A+R FD
Sbjct: 235 MVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECV 294
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+ L +N++++++A G + ++ + +EM++ RPD VT +S ++A LV+
Sbjct: 295 DRNLVLYNTILSNYARQGLAREALAILDEMLQ---QGPRPDRVTMLSAISASAQ--LVD- 348
Query: 373 GRAYFKLMTKTYRIEPQIEHY----GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
++ + Y I +E + ++D+ + G+ E A V M V W SL
Sbjct: 349 --LFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMS-NKTVVSWNSL 405
Query: 429 LNG 431
G
Sbjct: 406 TAG 408
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 181/525 (34%), Positives = 291/525 (55%), Gaps = 42/525 (8%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFDHLT 73
V+++L++C + L+Q+ + + F +L+ FC+L L YA +F +
Sbjct: 9 VVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQ 68
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
PN++++ A+I ++ S R + +F P VLK+C +L
Sbjct: 69 HPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEG 128
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+ VH Q++K+ P V ++V Y G +I +AR++FD M +R+VVSW +MI+GY +
Sbjct: 129 RQVHGQVLKTHLWFDPFVGNSMVRMYIDFG-EIELARRVFDRMPNRDVVSWNSMIAGYLK 187
Query: 194 VGDIKNAASLFDSMP-------------------------------DRDVPAWNSVIAGC 222
G+I+ A+ LFD MP D+DV W S+I+
Sbjct: 188 AGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTWTSMISAY 247
Query: 223 TQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLD 282
QN A+ FR M +S +RP+ +V LSAI G ++ GK +H YV N ++
Sbjct: 248 VQNRCPMKALDLFREM---LSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIE 304
Query: 283 LDS-FISNALIDMYGKCGSLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENSICVFE 340
L S FI +ALIDMY KCG ++ A F S +R + WNSMI+ A+HG + ++ +F
Sbjct: 305 LSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFV 364
Query: 341 EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL 400
EM R +I P+ +TF+ LL+ C+HGGLVE+G+ YF+ M + Y+I P+I+HYGC++DL
Sbjct: 365 EMERM---DIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLF 421
Query: 401 GRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI 460
GRAGR E+AL V++ M E D + W ++L+ +G + + A + IE+ P++ +
Sbjct: 422 GRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYV 481
Query: 461 MLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
+L+NIY + G+WD+V K+R M++ R K GCS + VB +VH+F
Sbjct: 482 LLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVBGKVHEF 526
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 175/476 (36%), Positives = 279/476 (58%), Gaps = 47/476 (9%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRR-------GQP 110
K L AR +FD ++ N +T+MIT Y Q A A L+++ + G+
Sbjct: 199 KCGELRDARTLFDEISHRNIVSWTSMITGYV-QNDDAHRALLLFKEFLVEESGSEGDGEV 257
Query: 111 QPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIAR 170
+ VL +C V E T+ VH ++K GFE VE L+++Y++ G ++G++R
Sbjct: 258 CVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCG-ELGVSR 316
Query: 171 KLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSD 230
++ FD M +RDV +WNS+IA QNG+ ++
Sbjct: 317 RV-------------------------------FDGMAERDVISWNSIIAVYAQNGMSTE 345
Query: 231 AISFFRRMGMEVSD-NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
++ F RM V D I N VTL L A H+G +LGK IH V + GL+ + F+
Sbjct: 346 SMEIFHRM---VKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGT 402
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
++IDMY KCG ++ AR+AFDR +K + SW++M+ + +HG ++ ++ VF EM
Sbjct: 403 SIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMA---G 459
Query: 350 IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEA 409
++P+ +TF+S+L AC+H GL+E+G +FK M+ + +EP +EHYGC+VDLLGRAG +EA
Sbjct: 460 VKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEA 519
Query: 410 LEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGEL 469
+++KGMK+ PD VVWG+LL C+++ D E + +KL E+DP N GY ++L+NIY +
Sbjct: 520 FDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADA 579
Query: 470 GKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
G+W++V ++R ++K+ K PG S +++ +VH F D+ HP+ E+IY+ LE +
Sbjct: 580 GRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKL 635
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 180/384 (46%), Gaps = 40/384 (10%)
Query: 71 HLTTPNTYLYTAMIT--AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
++ N + + ++I A + A AFS R + +PN+ +P +KSC +L
Sbjct: 111 YVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKL----SLKPNRSTFPCAIKSCSALL 166
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ + H Q + GFE V +ALV+ YS+ G ++ AR LFDE+S RN+VSWT+MI
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCG-ELRDARTLFDEISHRNIVSWTSMI 225
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
+GY + D A LF G E +
Sbjct: 226 TGYVQNDDAHRALLLFKEF--------------------------LVEESGSEGDGEVCV 259
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
+ + +V LSA + + +HG++ + G + D + N L+D Y KCG L +RR F
Sbjct: 260 DPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVF 319
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
D +++ + SWNS+I +A +G S S+ +F M++ D I + VT ++L AC H G
Sbjct: 320 DGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVK--DGEINYNAVTLSAVLLACAHSG 377
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
G+ + K +E + ++D+ + G+ E A + M+ E + W ++
Sbjct: 378 SQRLGKCIHDQVIKM-GLESNVFVGTSIIDMYCKCGKVEMARKAFDRMR-EKNVKSWSAM 435
Query: 429 LNGCKIYGRTDFAEFAVKKLIEID 452
+ G YG A+ A++ E++
Sbjct: 436 VAG---YGMHGHAKEALEVFYEMN 456
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 163/355 (45%), Gaps = 46/355 (12%)
Query: 173 FDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR-DVPAWNSVIAGCTQNGLFSDA 231
F S R + A++ R + N +LF+ D+ +V +WNSVIA ++G D+
Sbjct: 79 FSGFSKRRSICAGAVLR--RRYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSG---DS 133
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
+ R +++PN+ T CA+ + L G+ H G + D F+S+AL
Sbjct: 134 VEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSAL 193
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQ----- 346
+DMY KCG L++AR FD S + + SW SMI + + + ++ +F+E + +
Sbjct: 194 VDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEG 253
Query: 347 DHNIRPDGVTFISLLNACT-----------HGGLVEQG------------RAYFKL--MT 381
D + D + +S+L+AC+ HG L+++G AY K +
Sbjct: 254 DGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELG 313
Query: 382 KTYRI-----EPQIEHYGCLVDLLGRAGRFEEALEV----VKGMKIEPDEVVWGSLLNGC 432
+ R+ E + + ++ + + G E++E+ VK +I + V ++L C
Sbjct: 314 VSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLAC 373
Query: 433 KIYGRTDFAEFAVKKLIEID-PNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
G + ++I++ +N G + ++Y + GK + RK ++++N
Sbjct: 374 AHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKN 428
>gi|357444867|ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481759|gb|AES62962.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 178/520 (34%), Positives = 305/520 (58%), Gaps = 17/520 (3%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFD 70
+N +L++L++C + LK+L + + G S + FK++ F L S ++ Y+ +F
Sbjct: 13 INGTLLSLLDKCKSMLELKKLHAIGISYGLSHEYSFIFKILSFSALSNSGDIDYSYRVFS 72
Query: 71 HLTTPNTYLYTAMITAYASQ--PAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
+++P + + +I Y++ P H+ S++ M+R G P+ YP ++K+ +
Sbjct: 73 QISSPTIFSWNIIIRGYSNSKNPIHS---LSIFLKMLRHGVA-PDYLTYPFLVKASARLS 128
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ + VH QI+K+G E ++ +L++ Y+ GN I A K+F+ M +N+VSW +M+
Sbjct: 129 KQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGN-IMWAHKVFESMQGKNLVSWNSML 187
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
GY + G++ A +F+SM +RDV +W+S I G + G + +A++ F +M + +
Sbjct: 188 DGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMR---AVGPKA 244
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
N+VT+V LSA H G LQ G+++H Y+ N L + + +L+DMY KCG+++EA F
Sbjct: 245 NEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVF 304
Query: 309 DRNSKKR--LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
SK + + WN+MI A HG E S+ +F+EM Q IR D +T++ LL AC H
Sbjct: 305 RGISKSQTDVFIWNAMIGGLATHGLVEESLKLFKEM---QMAGIRSDEITYLCLLAACAH 361
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GGLV++ +F+ + K + P EHY C+VD+L RAG+ A + + + IEP + G
Sbjct: 362 GGLVKEAWNFFESLVKR-GMTPTSEHYACMVDVLARAGQLTTAYQFICQIPIEPTASMLG 420
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
++ +GC + D AE +KLIE+DPNN G I L+N+Y + +WD+ + +R+ ++ R
Sbjct: 421 AIFSGCINHRNFDLAETVGRKLIELDPNNDGRYIGLSNVYAVVKRWDDSKSMREAMERRG 480
Query: 487 AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K+PG S++E+ + H+F + DKTHP ++E Y L +V
Sbjct: 481 VKKSPGFSFVEISEIHHRFIAHDKTHPDSDETYSMLHFVV 520
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 172/522 (32%), Positives = 285/522 (54%), Gaps = 40/522 (7%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFDHLT 73
+L+ E I+ L Q + + G + F A +L+ + + YA IF +
Sbjct: 10 ILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIP 69
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
PN+Y++ +I AYA+ P +A +++ M+ P+++ + LKSC
Sbjct: 70 NPNSYMWNTIIRAYANSPT-PEAALTIFHQMLH-ASVLPDKYTFTFALKSCGSFSGVEEG 127
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSG--------------NDI------------- 166
+ +H ++K+G ++ L++ Y+ G D+
Sbjct: 128 RQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAER 187
Query: 167 ---GIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCT 223
+A LFDEM++RNV SW MISGY VG ++ A +F P ++V +WN++I G +
Sbjct: 188 GLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYS 247
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL 283
G FS+ + F M ++P+ TLV LSA H G L G+ +H Y+ +NG+ +
Sbjct: 248 HAGRFSEVLVLFEDMQ---HAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISI 304
Query: 284 DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
D F++ AL+DMY KCGS+++A F+ +K +++WNS+I+ + HG ++++ +F EM+
Sbjct: 305 DGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEML 364
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
+P+ VTF+ +L+AC+ GL+++GR F LM + I+P IEHYGC+VDLLGR
Sbjct: 365 V---EGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRV 421
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLA 463
G EEA E+V+ M + VVW SLL C+ +G + AE +KL+E+ P + L+
Sbjct: 422 GLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLS 481
Query: 464 NIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
N+Y +G+W +V +VR+ ++ + K PGCS IEVD V++F
Sbjct: 482 NMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIEVDGTVYEF 523
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 187/560 (33%), Positives = 304/560 (54%), Gaps = 46/560 (8%)
Query: 1 MVSVTNQL-NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL 59
+ +VT + ++ N + L+ L+ C LK++ + L GQ + F A K V +
Sbjct: 14 ITTVTTKFKSKNSNYKTLSALQSCKSTEDLKKIHAQLIITGQIKDTFIATKTVESYAVSA 73
Query: 60 SNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPH 119
N+ YA ++F + P++Y +T MI + + + A Y M +RG + N+F +
Sbjct: 74 RNIDYAFWVFVGINYPDSYSWTTMIRGFV-EAKNPEKALEFYGLMRQRG-VELNKFTFLF 131
Query: 120 VLKSC---PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN------------ 164
VLK+ P E R +VH ++VK GF AL++ Y + G+
Sbjct: 132 VLKAYGLRPSYQEGR---IVHGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMP 188
Query: 165 ------------------DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDS 206
D AR+LF EM +RNV SW A++ GY+++G + A SLFD
Sbjct: 189 NHNVVTWNTMITGCFGCGDTERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDL 248
Query: 207 MPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGML 266
MP+RDV +W S+I+ QNG ++A+ F+ M + + + + + LSA G L
Sbjct: 249 MPERDVVSWGSMISAYVQNGRAAEALELFKEMMLA---GVSADSIIITSILSACAQIGAL 305
Query: 267 QLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSF 326
+G+ IH Y+ R+ L D F+ AL+DMY KCG + A F+ +K L SWN+M++
Sbjct: 306 DMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGL 365
Query: 327 ALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRI 386
A+HG ++ +F++M + + P+ +TF+++L+AC+H G VE+G F M K + I
Sbjct: 366 AIHGHGFAALELFKQM---ESTGVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNI 422
Query: 387 EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
P++EHYGC+VD+L R G EA E+++ M +EP+ V+WG+LLN CK++G T+ E V
Sbjct: 423 TPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVG 482
Query: 447 KLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA-YKTPGCSWIEVDKQVHQF 505
+ ++ +GG ++L+NI+ +W+EV K RKM+K K PG S IE+D VH F
Sbjct: 483 YIQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTRKMMKQMGVEKKIPGYSSIELDSVVHDF 542
Query: 506 HSLDKTHPRTEEIYDALESM 525
+ D+ H + E+ +E +
Sbjct: 543 FAEDRLHSKWREVSTVIERL 562
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 290/513 (56%), Gaps = 13/513 (2%)
Query: 16 VLAILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
++ ++ C + L K++ S+++ LG + LV +K ++ AR IFD
Sbjct: 234 MVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDM-YMKCGDICAARQIFDEC 292
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
N +Y +++ Y AS + +M+++G P+P++ + +C + +
Sbjct: 293 ANKNLVMYNTIMSNYVHHE-WASDVLVILDEMLQKG-PRPDKVTMLSTIAACAQLGDLSV 350
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
K H ++++G E + + A+++ Y + G A K+F+ M ++ VV+W ++I+G
Sbjct: 351 GKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREA-ACKVFEHMPNKTVVTWNSLIAGLV 409
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
R GD++ A +FD M +RD+ +WN++I Q +F +AI FR M + I ++VT
Sbjct: 410 RDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQ---NQGIPGDRVT 466
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
+V SA G+ G L L K + Y+ +N + +D + AL+DM+ +CG A F R
Sbjct: 467 MVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRME 526
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
K+ +++W + I A+ G +E +I +F EM+ + ++PD V F++LL AC+HGG V+Q
Sbjct: 527 KRDVSAWTAAIGVMAMEGNTEGAIELFNEML---EQKVKPDDVVFVALLTACSHGGSVDQ 583
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
GR F M K + I P I HYGC+VDLLGRAG EEA+++++ M IEP++VVWGSLL C
Sbjct: 584 GRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAAC 643
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+ + + A +A +KL ++ P G ++L+NIY GKW +V +VR +K++ K PG
Sbjct: 644 RKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPG 703
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
S IEV +H+F S D++H I LE +
Sbjct: 704 SSSIEVQGLIHEFTSGDESHAENTHIGLMLEEI 736
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 213/448 (47%), Gaps = 64/448 (14%)
Query: 19 ILERCNHINHLKQLQSFLTTLG------QSQTNFYAFKLVRFCTLKLSNLTYARFIF--D 70
+L C + LKQL + G S N V+ TL+ +L YAR F D
Sbjct: 31 LLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLE--SLDYARNAFGDD 88
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ ++Y +I YAS A LY M+ G P+++ +P +L +C +L
Sbjct: 89 DGNMASLFMYNCLIRGYAS-AGLGDQAILLYVQMLVMG-IVPDKYTFPFLLSACSKILAL 146
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
VH ++K G E V +L++ Y+ G + + RKLFD M +RNVVSWT++I+G
Sbjct: 147 SEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGK-VDLGRKLFDGMLERNVVSWTSLING 205
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y+ RD L +A+S F +MG + PN
Sbjct: 206 YS----------------GRD---------------LSKEAVSLFFQMG---EAGVEPNP 231
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
VT+VC +SA L+LGK + Y+ G++L + + NAL+DMY KCG + AR+ FD
Sbjct: 232 VTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDE 291
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
+ K L +N++++++ H + + + + +EM++ RPD VT +S + AC G +
Sbjct: 292 CANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQ---KGPRPDKVTMLSTIAACAQLGDL 348
Query: 371 EQGRAYFKLMTKTYRIEPQIEHY----GCLVDLLGRAGRFEEALEVVKGMKIEPDE--VV 424
G++ + Y + +E + ++D+ + G+ E A +V + M P++ V
Sbjct: 349 SVGKS-----SHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHM---PNKTVVT 400
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEID 452
W SL+ G G + A +++E D
Sbjct: 401 WNSLIAGLVRDGDMELAWRIFDEMLERD 428
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 170/475 (35%), Positives = 282/475 (59%), Gaps = 9/475 (1%)
Query: 51 LVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP 110
LVRF +L+ A +F ++ + + +MI+A+A Q A L+ M R
Sbjct: 167 LVRFYG-ACGDLSMAERLFKGISCKDVVSWNSMISAFA-QGNCPEDALELFLKM-ERENV 223
Query: 111 QPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIAR 170
PN VL +C L+ + V + I + G + + A+++ Y++ G+ + A+
Sbjct: 224 MPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGS-VDDAQ 282
Query: 171 KLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSD 230
KLFDEM +R+V SWT M+ GY ++GD A +F++MP +++ AWN +I+ QNG +
Sbjct: 283 KLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKE 342
Query: 231 AISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNA 290
A++ F + ++S +P++VTLV LSA G + LG IH Y+ R G+ L+ + ++
Sbjct: 343 ALAIFNEL--QLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISS 400
Query: 291 LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
L+DMY KCGSL++A F ++ + W++MI +HG+ + +I +F EM Q+ +
Sbjct: 401 LVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEM---QEAKV 457
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
+P+ VTF ++L AC+H GLV++GR +F M Y + P+++HY C+VD+LGRAG EEA+
Sbjct: 458 KPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAM 517
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELG 470
E++ M P VWG+LL C ++ + E A +L++++P N G ++L+NIY + G
Sbjct: 518 ELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTG 577
Query: 471 KWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+W++V ++RK+++D K PGCS IE + VH+F D THP + IY LE +
Sbjct: 578 RWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEI 632
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 215/457 (47%), Gaps = 72/457 (15%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDH 71
N Q+L+ +++C+ LK++ + + G F A KL L S L YAR +FD
Sbjct: 25 NHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQ 84
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ PN Y + +I AYAS + +F ++ D++ + + PN+F +P V+K+ ++ SR
Sbjct: 85 IPQPNLYTWNTLIRAYASS-SDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASR 143
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
VH +K F + +LV Y G D+ +A +LF +S ++VVSW +MIS +
Sbjct: 144 VGTAVHGMAIKLSFGMDLYILNSLVRFYGACG-DLSMAERLFKGISCKDVVSWNSMISAF 202
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
+ C + DA+ F +M E N+ PN V
Sbjct: 203 AQ--------------------------GNCPE-----DALELFLKMERE---NVMPNSV 228
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
T+V LSA L+ G+ + Y+ R G+ +D + NA++DMY KCGS+ +A++ FD
Sbjct: 229 TMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEM 288
Query: 312 SK-------------------------------KRLTSWNSMINSFALHGQSENSICVFE 340
+ K + +WN +I+++ +G+ + ++ +F
Sbjct: 289 PERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFN 348
Query: 341 EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL 400
E+ + +PD VT +S L+AC G ++ G + + K I LVD+
Sbjct: 349 ELQLSK--IAKPDEVTLVSTLSACAQLGAIDLG-GWIHVYIKREGIVLNCHLISSLVDMY 405
Query: 401 GRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
+ G E+ALEV ++ E D VW +++ G ++GR
Sbjct: 406 AKCGSLEKALEVFYSVE-ERDVYVWSAMIAGLGMHGR 441
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 129/275 (46%), Gaps = 17/275 (6%)
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVI-AGCTQNGLFSD 230
FD S + + +A+ S T + A +LFD +P ++ WN++I A + + F
Sbjct: 54 FFDPFSASKLFTASALSSFST----LDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQS 109
Query: 231 AISFFRRMGMEVSDNIR--PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS 288
+ F +++ D PN+ T + A ++G +HG + +D +I
Sbjct: 110 FVIF-----LDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYIL 164
Query: 289 NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDH 348
N+L+ YG CG L A R F S K + SWNSMI++FA E+++ +F +M R
Sbjct: 165 NSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMER---E 221
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
N+ P+ VT + +L+AC +E GR + + I+ + ++D+ + G ++
Sbjct: 222 NVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERK-GIKVDLTLCNAMLDMYTKCGSVDD 280
Query: 409 ALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEF 443
A ++ M E D W +L+G G D A
Sbjct: 281 AQKLFDEMP-ERDVFSWTIMLDGYAKMGDYDAARL 314
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/521 (35%), Positives = 293/521 (56%), Gaps = 48/521 (9%)
Query: 15 QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHLT 73
Q ++ ++C + LKQL +FL G + T +L+ + +S + YA +F ++
Sbjct: 15 QQSSLWQKCTNFRSLKQLHAFLIVNGLNSTTSVLRELIFVSAIVVSGTMDYAHQLFAQIS 74
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
P+ +++ MI A Q ++A SLY M RG +P++F + VLK+C + +
Sbjct: 75 QPDIFMWNTMIRGSA-QTLKPATAVSLYTQMENRG-VRPDKFTFSFVLKACTKLSWVKLG 132
Query: 134 KMVHTQIVKSGFEQYPVVE-------------------------------TALVNSYSRS 162
+H +++KSGF+ V +AL Y+R
Sbjct: 133 FGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARR 192
Query: 163 GNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC 222
G + +AR+LFDEM +++VSW MI+ Y + G+++ A LFD +P +DV WN++IAG
Sbjct: 193 GK-LDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGY 251
Query: 223 TQNGLFSDAISFF---RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN 279
+ L +A+ F R +G RP+ VT++ LSA G L++GK IH ++
Sbjct: 252 VLSRLNKEALEMFDAMRDLGQ------RPDDVTMLSILSASADLGDLEIGKKIHRSIFDM 305
Query: 280 GL-DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICV 338
DL +SNALIDMY KCGS+ A F KK +SWNS+I ALHG +E SI +
Sbjct: 306 CCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINL 365
Query: 339 FEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVD 398
F+EM+R + ++P+ +TF+++L AC+H G V +GR YF LM ++IEP I+HYGC+VD
Sbjct: 366 FQEMLRLK---MKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVD 422
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGY 458
+LGRAG EA + + M+IEP+ ++W +LL C+++G + A ++L+++ + G
Sbjct: 423 ILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGD 482
Query: 459 GIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVD 499
++L+NIY G+WD V+KVRK++ D K G S I+ D
Sbjct: 483 YVLLSNIYASQGEWDGVQKVRKLMDDGGVKKKVGHSLIDSD 523
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 296/517 (57%), Gaps = 18/517 (3%)
Query: 17 LAILERCN---HINHLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDHL 72
+++L CN +N +++ S ++ G A L+ +C K +++ AR IFD +
Sbjct: 262 VSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYC--KCNSVQEAREIFDRM 319
Query: 73 TTPNTYLYTAMITAYASQ----PAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
+ + ++AMI YA F L M R G PN+ + +L++C
Sbjct: 320 SKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREG-VFPNKVTFMSILRACTAHG 378
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ +H ++ K GFE ++TA+ N Y++ G+ I A ++F +M+++NVV+WT+ +
Sbjct: 379 ALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGS-IYEAEQVFSKMANKNVVAWTSFL 437
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
S Y + GD+ +A +F MP R+V +WN +IAG QNG D + F + ++ +P
Sbjct: 438 SMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNG---DIVKVFELLSSMKAEGFQP 494
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
++VT++ L A G L+ GK++H + GL+ D+ ++ +LI MY KCG + EAR F
Sbjct: 495 DRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVF 554
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
D+ S + +WN+M+ + HG ++ +F+ M++ + P+ +T ++++AC+ G
Sbjct: 555 DKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLK---ERVSPNEITLTAVISACSRAG 611
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
LV++GR F++M + +++ P+ +HYGC+VDLLGRAGR +EA E ++ M EPD VW +L
Sbjct: 612 LVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHAL 671
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L CK + AE A ++E++P+ I L+NIY + G+WD+ KVR+++ DR
Sbjct: 672 LGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLK 731
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K G S IE+D ++H F + D HP + I+ LE++
Sbjct: 732 KDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETL 768
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 193/397 (48%), Gaps = 56/397 (14%)
Query: 39 LGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAF 98
LG S NFY+ K ++ A +F +T + +++MI AYA H + AF
Sbjct: 93 LGNSLINFYS---------KFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNN-HPAKAF 142
Query: 99 SLYRDMVRRGQPQPNQFIYPHVLKSCPD--VLESRGTKMVHTQIVKSGFEQYPVVETALV 156
+ M +PN+ + +LK+C + +LE +G K +HT + G E
Sbjct: 143 DTFERMTD-ANIEPNRITFLSILKACNNYSILE-KGRK-IHTIVKAMGME---------- 189
Query: 157 NSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWN 216
D+ +A TA+I+ Y++ G+I A +F M +R+V +W
Sbjct: 190 -------TDVAVA---------------TALITMYSKCGEISVACEVFHKMTERNVVSWT 227
Query: 217 SVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV 276
++I Q+ ++A + +M + I PN VT V L++ L G+ IH ++
Sbjct: 228 AIIQANAQHRKLNEAFELYEQM---LQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHI 284
Query: 277 YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG--QSEN 334
GL+ D ++NALI MY KC S++EAR FDR SK+ + SW++MI +A G E+
Sbjct: 285 SERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKES 344
Query: 335 SICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT-YRIEPQIEHY 393
VF+ + R + + P+ VTF+S+L ACT G +EQGR ++K + ++ ++
Sbjct: 345 IDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQ-- 402
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
+ ++ + G EA +V M + V W S L+
Sbjct: 403 TAIFNMYAKCGSIYEAEQVFSKMA-NKNVVAWTSFLS 438
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 149/327 (45%), Gaps = 40/327 (12%)
Query: 113 NQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKL 172
N Y V++ C KMVH Q+ + G E + +L+N YS+ D+ A ++
Sbjct: 55 NSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKF-EDVASAEQV 113
Query: 173 FDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAI 232
F M+ R+VV+W++MI+ Y A F+ M D
Sbjct: 114 FRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDA---------------------- 151
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALI 292
NI PN++T + L A + +L+ G+ IH V G++ D ++ ALI
Sbjct: 152 ------------NIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALI 199
Query: 293 DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
MY KCG + A F + +++ + SW ++I + A H + + ++E+M++ I P
Sbjct: 200 TMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQA---GISP 256
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
+ VTF+SLLN+C + +GR +++ +E + L+ + + +EA E+
Sbjct: 257 NAVTFVSLLNSCNTPEALNRGRRIHSHISER-GLETDMIVANALITMYCKCNSVQEAREI 315
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTD 439
M + D + W +++ G G D
Sbjct: 316 FDRMS-KRDVISWSAMIAGYAQSGYKD 341
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/510 (34%), Positives = 295/510 (57%), Gaps = 19/510 (3%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFL--TTLGQSQTNFYAF-KLVRFCTLK-LSNLTY 64
N TL + ++E+C ++ +K + + + + + ++ +Y F +L+ FC+ ++ Y
Sbjct: 15 NLTLKNTLSTLIEQCKNLKEIKIIHTHILKSPILHTRDQYYLFTRLLYFCSFSNYASFNY 74
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASS-----AFSLYRDMVRRGQPQPNQFIYPH 119
A +F + P +Y MI +Y S A LY+ M+ +G PN +P
Sbjct: 75 ANNVFHMIKYPELRVYNIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKG-IVPNNLTFPF 133
Query: 120 VLKSCPDVLESRGT--KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
++K C L+ GT +++H ++K GF V +L++ + G ARK+FDEM
Sbjct: 134 LVKGCSR-LQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKN-ARKVFDEMF 191
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
R+VVSW +M+ GY R G+++ A +LF M R++ WNS+I G Q G +++ F
Sbjct: 192 VRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHE 251
Query: 238 MGMEVSDNI-RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M D++ +P+++T+ LSA G + GK +H Y+ +N ++ D I AL++MYG
Sbjct: 252 MQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYG 311
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG +++A F+ +K ++W +MI+ FALHG + + F EM + ++P+ VT
Sbjct: 312 KCGDVQQAIEIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEM---EKAGVKPNHVT 368
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
F+ LL+AC+H GLVEQGR F +M + Y IEPQI HY C+VD+L RA F+EAL +++ M
Sbjct: 369 FVGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSM 428
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
++PD VWG+LL GC+++G E LI+++P+N + I L +IY + GK+D +
Sbjct: 429 PMKPDVYVWGALLGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAK 488
Query: 477 KVRKMLKDRN-AYKTPGCSWIEVDKQVHQF 505
++R +K+R K PGCS IE++ V +F
Sbjct: 489 RIRNSMKERGIETKIPGCSIIEINGVVQEF 518
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/476 (36%), Positives = 278/476 (58%), Gaps = 16/476 (3%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K + YA+ +FD +T + + ++IT Y Q A ++ +M++ G +P++
Sbjct: 198 KCGRVEYAQSVFDEMTVRSRVSWNSLITCY-EQNGPVDEALKIFVEMIKCG-VEPDEVTL 255
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSG-FEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
V+ +C + + + +H ++VK F ++ AL++ Y++ N I AR +FD M
Sbjct: 256 ASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKC-NRINEARIIFDMM 314
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
R+VVS T+M+SGY + +K A +F +M +DV WN++IAGCTQNG +A+ FR
Sbjct: 315 PIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFR 374
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL------DLDSFISNA 290
+ E ++ P T L+A + LQLG+ H +V ++G D D F+ N+
Sbjct: 375 LLKRE---SVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNS 431
Query: 291 LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
LIDMY KCGS++ R F +K SWN+MI +A +G ++ VF +M+ +
Sbjct: 432 LIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGE--- 488
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
PD VT I +L AC+H GL+++GR YF+ MT + + P +HY C+VDLLGRAG EEA
Sbjct: 489 APDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAK 548
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELG 470
+++ M ++PD +VWGSLL CK++ E+ VKKL+E+DP N G ++L+N+Y E
Sbjct: 549 NLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENR 608
Query: 471 KWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
W V +VRK+++ R K PGCSWIE+ +++ F DK H R +EIY L +++
Sbjct: 609 DWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTIL 664
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 159/302 (52%), Gaps = 7/302 (2%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ +L C +R T VH I+KS F ++ L++ Y + G + +ARKLFD M
Sbjct: 22 FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGC-VDVARKLFDRM 80
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+RN+ SW ++I +T+ G + +A +F+ MP D +WNS+I+G Q+G F +A+ +F
Sbjct: 81 LERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFA 140
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+M N+ + ALSA L+LG IH VYR+ D ++ +AL+DMY
Sbjct: 141 QMH---GHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYS 197
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG ++ A+ FD + + SWNS+I + +G + ++ +F EM++C + PD VT
Sbjct: 198 KCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKC---GVEPDEVT 254
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
S+++AC +++G+ + K + L+D+ + R EA + M
Sbjct: 255 LASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMM 314
Query: 417 KI 418
I
Sbjct: 315 PI 316
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 189/450 (42%), Gaps = 99/450 (22%)
Query: 43 QTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYR 102
+ N +++ + K L A IF+ + + + +MI+ + Q A +
Sbjct: 82 ERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGF-EQHGRFDEALVYFA 140
Query: 103 DMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRS 162
M G N++ + L +C + + + +H+ + +S + + +ALV+ YS+
Sbjct: 141 QMHGHG-FLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKC 199
Query: 163 GNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC 222
G + A+ +FDEM+ R+ VSW ++I+ Y
Sbjct: 200 GR-VEYAQSVFDEMTVRSRVSWNSLITCY------------------------------- 227
Query: 223 TQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV-----Y 277
QNG +A+ F M + + P++VTL +SA ++ G+ IH V +
Sbjct: 228 EQNGPVDEALKIFVEM---IKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEF 284
Query: 278 RNGLDLDSFISNALIDMYGKCGSLKEARRAFD------------------RNSK------ 313
RN D + NAL+DMY KC + EAR FD + SK
Sbjct: 285 RN----DLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARY 340
Query: 314 -------KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
K + +WN++I +G++E ++ +F + R ++ P TF +LLNAC +
Sbjct: 341 MFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKR---ESVWPTHYTFGNLLNACAN 397
Query: 367 GGLVEQGR-AYFKLMTKTYRIEPQIEHYG---------CLVDLLGRAGRFEEALEVVKGM 416
++ GR A+ ++ +R + YG L+D+ + G E V + M
Sbjct: 398 LADLQLGRQAHSHVLKHGFRFQ-----YGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHM 452
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
+E D V W +++ G Y + F A++
Sbjct: 453 -LEKDCVSWNAMIVG---YAQNGFGNKALE 478
>gi|15228028|ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana]
gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/503 (34%), Positives = 285/503 (56%), Gaps = 9/503 (1%)
Query: 22 RCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYT 81
+C+ + LKQ+ + L G A +++ FC S++ YA +F + N +++
Sbjct: 34 QCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWN 93
Query: 82 AMITAYASQPAHASSAFSLYRDMV-RRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQI 140
+I + S+ + A S++ DM+ +P + YP V K+ + ++R + +H +
Sbjct: 94 TIIRGF-SRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV 152
Query: 141 VKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
+K G E + +++ Y G I A ++F M +VV+W +MI G+ + G I A
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLIE-AWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQA 211
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
+LFD MP R+ +WNS+I+G +NG F DA+ FR M +++P+ T+V L+A
Sbjct: 212 QNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ---EKDVKPDGFTMVSLLNAC 268
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
+ G + G+ IH Y+ RN +L+S + ALIDMY KCG ++E F+ KK+L+ WN
Sbjct: 269 AYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWN 328
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
SMI A +G E ++ +F E+ R + PD V+FI +L AC H G V + +F+LM
Sbjct: 329 SMILGLANNGFEERAMDLFSELER---SGLEPDSVSFIGVLTACAHSGEVHRADEFFRLM 385
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+ Y IEP I+HY +V++LG AG EEA ++K M +E D V+W SLL+ C+ G +
Sbjct: 386 KEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEM 445
Query: 441 AEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDK 500
A+ A K L ++DP+ ++L+N Y G ++E + R ++K+R K GCS IEVD
Sbjct: 446 AKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDF 505
Query: 501 QVHQFHSLDKTHPRTEEIYDALE 523
+VH+F S THP++ EIY L+
Sbjct: 506 EVHEFISCGGTHPKSAEIYSLLD 528
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/466 (35%), Positives = 273/466 (58%), Gaps = 9/466 (1%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
+L AR +FD + + +T ++ YA + A+ ++ MV G PN+
Sbjct: 181 SLPDARKLFDEMADRDVVSWTTLVDGYA-RGGLPDEAWRVFCRMVVAGGGWPNEVTLVAA 239
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
+ + +MVH +V+SG +E ALV+ + + G + A+++FD M ++
Sbjct: 240 ASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGC-VASAKEIFDGMPIKD 298
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
V SWT+M+S Y + GD++NA LF +P+R+ +W+ ++A +Q L +A+ F M
Sbjct: 299 VYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDM-- 356
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH-GYVYRNGLDLDSFISNALIDMYGKCG 299
++ + P TLV LSA G L +G+ ++ Y+ + ++L +SNA IDM+ KCG
Sbjct: 357 -IAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCG 415
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
+ A R F K + SWN+MI + ALHGQSE ++ +F++ + I PD +T+I
Sbjct: 416 DVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKF---KAIGIFPDEITYIG 472
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
+L+AC+H GLV +GR +FK M Y IEP+ EHY C++DLLG+ G EEA EV + M +
Sbjct: 473 VLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVG 532
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVR 479
DE WG+LLN C+++G + + A KL+ +DP++ G ++++ IY KW +V+ +R
Sbjct: 533 ADEAGWGALLNACRMHGNVEIGKCAADKLVGLDPSDSGIYVLMSQIYASKSKWGQVKMIR 592
Query: 480 KMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+++DR K PGCS IEVD + H+F + D +H +E+IY ALE++
Sbjct: 593 TVMRDRGVKKNPGCSSIEVDGKFHEFLAADVSHAHSEDIYAALENI 638
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 217 SVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV 276
+++ G + G + A++ FRR+ + D + + T+V A+ A T + IH
Sbjct: 102 TMMRGFLRAGKPAHALALFRRV---LRDRLPADARTIVFAVKAA--TTSSSPAEAIHCVA 156
Query: 277 YRNGLDLDS-FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
++ G S + NAL+ MY SL +AR+ FD + + + SW ++++ +A G + +
Sbjct: 157 FKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEA 216
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT-YRIEPQIEHYG 394
VF M+ P+ VT ++ +A GL+ GR + + ++ R+ +E+
Sbjct: 217 WRVFCRMVVAGGG--WPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLEN-- 272
Query: 395 CLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPN 454
LVD+ G+ G A E+ GM I+ D W S+++ Y + E A K EI PN
Sbjct: 273 ALVDMFGKCGCVASAKEIFDGMPIK-DVYSWTSMVSA---YAKCGDLENAGKLFKEI-PN 327
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/512 (37%), Positives = 291/512 (56%), Gaps = 14/512 (2%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
++L C+ +L + + G AF+L R L ++ + P T
Sbjct: 29 SLLAACSTARRASELHAAVVRKGLDSDRAVAFRLQRAYAAS-GRLDHSLTLLGRTKDPTT 87
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
YT+ I A++S+ H +L DM+ G P L +C + R +H
Sbjct: 88 IFYTSAIHAHSSRGLHLP-GLALLSDMLSEGL-LPTAHTLSASLPACRGLSLGRA---LH 142
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
K V TAL++ Y+R+G+ AR LFDEM D +VVS TAM++ Y +G +
Sbjct: 143 AYAFKLALSGDSYVATALLSMYARAGDAA-AARALFDEMPDPHVVSVTAMLTCYANMGAL 201
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
+A LFD +P +D WN++I G TQ+G ++A+ FRRM + + P++VT+V L
Sbjct: 202 DDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRM---LRSSAEPDEVTVVLVL 258
Query: 258 SAIGHTGMLQLGKVIHGYVYRN-GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
SA+ G ++ GK +H YV + + L+ ++ AL+DMY KCGSL++A F K +
Sbjct: 259 SAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDI 318
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
WN+MIN +A+HG S ++ +F ++ +D + P +TFI LLNAC+H GLVE+GR++
Sbjct: 319 VVWNAMINGYAMHGDSRKALEMFVQL---RDQGLWPTDITFIGLLNACSHSGLVEEGRSF 375
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
F+ M Y I+P+IEHYGC+VDLLGRAG EEA +V+ + I PD V+W SLL C+++
Sbjct: 376 FQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHK 435
Query: 437 RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWI 496
+ L+ N G I+L+NIY +GKW+EV +VR M+K K PGCS I
Sbjct: 436 NMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAI 495
Query: 497 EVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
E+D++V++F + D +HP T+EIY L+ M AL
Sbjct: 496 EIDRKVYEFVAGDMSHPCTDEIYAMLDKMNAL 527
>gi|357150569|ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 548
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 178/499 (35%), Positives = 283/499 (56%), Gaps = 43/499 (8%)
Query: 60 SNLTYARFIFDHL--TTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQF 115
S+ YAR IFD + + N YL+TA +++YA + PA A+ AF L+ M+R G P+PN F
Sbjct: 51 SSPQYARAIFDSVPAASANVYLWTATVSSYAKHASPALAAEAFPLFMFMLRSG-PRPNGF 109
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSG---------------------------FEQY 148
VLKS + + VH +VK+G F++
Sbjct: 110 TVSSVLKSLSKLRAAHQVCQVHGFLVKAGLASSLHVGATLLDSYGNLCRVKDARRVFDEM 169
Query: 149 P----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLF 204
P VV A+V+ Y ++G D+ AR++FD M +R+ +SW ++SGY R GD A LF
Sbjct: 170 PRSNVVVGNAMVSGYVKAG-DVEAARQVFDGMVERDSISWNTLMSGYLRRGDAGLARDLF 228
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
D MP R+V +WN +I+ C++ GL++D+++ F +M + RP+ T+ +SA G
Sbjct: 229 DEMPQRNVNSWNMMISACSEVGLWADSVAVFNQMRFM---SFRPDAATMAVLMSACAQLG 285
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
L + + ++G + + ++++ + N+L+DM+ KCG EA F K + S+N M++
Sbjct: 286 FLSVARQVYGLLRKGCVEMNCHVHNSLVDMFAKCGCFSEAHLLFAEMDPKDVVSYNVMVS 345
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
+ A HG ++++ +FE+M+ + ++PD VTF+ +L+AC H GLV+ G+ YF+ M TY
Sbjct: 346 ALAHHGHGKDALKLFEQMI---EGGLQPDAVTFLGVLSACAHAGLVDSGKYYFETMGTTY 402
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
IE +HY C+VDL GR G EEA VK M ++P +WG+LLN C+ + D E A
Sbjct: 403 AIEKSADHYACMVDLYGRVGLIEEAHYFVKIMPVKPHAGIWGALLNACRKHCNIDVGEVA 462
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
++LI I+P N G ++L+N +WD V VR++++ K G SW+EV+ VH+
Sbjct: 463 ARELIRIEPMNPGNYVLLSNTLAWSQQWDAVGDVRQLMRGNGIDKNTGFSWVEVESVVHE 522
Query: 505 FHSLDKTHPRTEEIYDALE 523
F D +HP +EI LE
Sbjct: 523 FLMGDFSHPSFDEICGILE 541
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/516 (34%), Positives = 294/516 (56%), Gaps = 46/516 (8%)
Query: 10 QTLNQ-QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFI 68
++L+Q Q++++L+R HIN + + + L G SQ F F+L+R C+ K + YA I
Sbjct: 35 KSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCS-KCHAIDYASRI 93
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
F + PN YLYTA+I + S + A LY M+ P+ ++ +LK+C L
Sbjct: 94 FQYTHNPNVYLYTALIDGFVSSGNYLE-AIQLYSRMLHES-ILPDNYLMASILKACGSQL 151
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
R + VH++ +K GF +V ++ Y + G ++G AR++
Sbjct: 152 ALREGREVHSRALKLGFSSNRLVRLRIMELYGKCG-ELGDARRV---------------- 194
Query: 189 SGYTRVGDIKNAASLFDSMPD----RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
F+ MP+ +D W ++I G +N + A+ FR GM+ +
Sbjct: 195 ---------------FEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFR--GMQ-GE 236
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
N+RPN+ T+VC LSA G L++G+ +H Y+ + ++L+ F+ NALI+MY +CGS+ EA
Sbjct: 237 NVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEA 296
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ FD + + ++N+MI+ +++G+S +I +F M+ +RP VTF+ +LNAC
Sbjct: 297 QTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMV---GRRLRPTNVTFVGVLNAC 353
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+HGGLV+ G F M + YR+EPQIEHYGC+VDLLGR GR EEA ++++ MK+ PD ++
Sbjct: 354 SHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIM 413
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
G+LL+ CK++ + E K+L + + G ++L+++Y GKW E +VR +K+
Sbjct: 414 LGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKE 473
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYD 520
K PGCS IEV+ ++H+F D HP+ E IY+
Sbjct: 474 AGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYE 509
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 186/514 (36%), Positives = 290/514 (56%), Gaps = 20/514 (3%)
Query: 20 LERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPN 76
L C+ + LK Q+ ++ S F L+ F + K + AR +FD + N
Sbjct: 163 LSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS-KCGLVGCARRVFDGMEEKN 221
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
+ +IT Y Q A A + M G +P++ V+ +C + + +
Sbjct: 222 VVSWNCLITCY-EQNGPAIEALEAFGRMTELG-FKPDEVTLASVVSACATLAAFKEGVQI 279
Query: 137 HTQIVKSG-FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
H ++VKS F ++ ALV+ Y++ G + AR +FD M RN VS T M+SGY +
Sbjct: 280 HARVVKSDKFRNDLILGNALVDMYAKCGR-VNEARCVFDRMPVRNAVSETTMVSGYAKSA 338
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
+K A S+F ++ +D+ +WN++IAG TQNG +A+ FR + E ++ P T
Sbjct: 339 SVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRE---SVCPTHYTFGN 395
Query: 256 ALSAIGHTGMLQLGK------VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
L+A + L+LG+ V HG+ +++G + D F+ N+LIDMY KCGS++E R F+
Sbjct: 396 LLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFE 455
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
+K SWN+MI +A +G ++ +F++M+ + +PD VT I L AC+H GL
Sbjct: 456 NMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGE---KPDHVTMIGTLCACSHAGL 512
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
VE+GR YF MTK + + P +HY C+VDLLGRAG EEA ++++ M +PD VVW SLL
Sbjct: 513 VEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLL 572
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
+ CK++ ++ +K+ EIDP + G ++LAN+Y ELG+W + VRK+++ R K
Sbjct: 573 SACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVK 632
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
PGCSWI++ VH F DK HP+ +EIY L+
Sbjct: 633 QPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILK 666
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 170/346 (49%), Gaps = 11/346 (3%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ +L C + SR + VH +++++ F + ++ L++ Y + G + ARK+FD M
Sbjct: 27 FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGY-LDYARKVFDRM 85
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
S+RNV S+ ++IS R G + +A LF MP++D +WNS+IAG Q+ F +A+ +F
Sbjct: 86 SERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFV 145
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
RM D+ N + LSA L+LG IHG + ++ LD F+ + LID Y
Sbjct: 146 RMH---RDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG + ARR FD +K + SWN +I + +G +I E R + +PD VT
Sbjct: 203 KCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGP---AIEALEAFGRMTELGFKPDEVT 259
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
S+++AC ++G + K+ + + LVD+ + GR EA V M
Sbjct: 260 LASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRM 319
Query: 417 ----KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGY 458
+ +V G + R+ FA K ++ + GY
Sbjct: 320 PVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGY 365
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 111/473 (23%), Positives = 203/473 (42%), Gaps = 90/473 (19%)
Query: 3 SVTNQLNQT-------LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFC 55
SV +L QT + +++ + +C ++++ +++ + S+ N ++F +
Sbjct: 45 SVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRM-----SERNVFSFNSIIST 99
Query: 56 TLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQF 115
++ + + ++F + + + +MI +A Q A + M R N +
Sbjct: 100 LMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFA-QHDRFEEALDWFVRM-HRDDFVLNDY 157
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
+ L +C + + + +H I KS + + + L++ YS+ G +G AR++FD
Sbjct: 158 SFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGL-VGCARRVFDG 216
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
M ++NVVSW +I+ Y QNG +A+ F
Sbjct: 217 MEEKNVVSWNCLITCY-------------------------------EQNGPAIEALEAF 245
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR-NGLDLDSFISNALIDM 294
RM +P++VTL +SA + G IH V + + D + NAL+DM
Sbjct: 246 GRM---TELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDM 302
Query: 295 YGKCGSLKEARRAFDRN-------------------------------SKKRLTSWNSMI 323
Y KCG + EAR FDR +K + SWN++I
Sbjct: 303 YAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALI 362
Query: 324 NSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR-AYFKLMTK 382
+ +G++E ++ +F + R ++ P TF +LLNA + +E GR A+ ++
Sbjct: 363 AGYTQNGENEEALGLFRMLKR---ESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKH 419
Query: 383 TYRI----EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+R EP I L+D+ + G EE L V + M +E D V W +++ G
Sbjct: 420 GFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENM-VEKDHVSWNTMIIG 471
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 175/494 (35%), Positives = 286/494 (57%), Gaps = 23/494 (4%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFDHLT 73
V+++L++C + L+Q+ + + F +L+ FC+L L YA +F +
Sbjct: 9 VVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQ 68
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
PN++++ A+I ++ S R + +F P VLK+C +L
Sbjct: 69 HPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEG 128
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+ VH Q++K+ P V ++V Y G +I +AR++FD M +R+VVSW +MI+GY +
Sbjct: 129 RQVHGQVLKTHLWFDPFVGNSMVRMYIDFG-EIELARRVFDRMPNRDVVSWNSMIAGYLK 187
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
G+I+ A+ LFD MP+RD+ + N++I G + L S +RP+ +
Sbjct: 188 AGEIELASELFDEMPERDLVSCNAMIDGYGKEML---------------SLGLRPDGPAI 232
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS-FISNALIDMYGKCGSLKEARRAFDRNS 312
V LSAI G ++ GK +H YV N ++L S FI +ALIDMY KCG ++ A F S
Sbjct: 233 VSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSIS 292
Query: 313 KKR-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
+R + WNSMI+ A+HG + ++ +F EM R +I P+ +TF+ LL+ C+HGGLVE
Sbjct: 293 HRRNIGDWNSMISGLAIHGLAREALDIFVEMERM---DIEPNEITFLGLLSTCSHGGLVE 349
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G+ YF+ M + Y+I P+I+HYGC++DL GRAGR E+AL V++ M E D + W ++L+
Sbjct: 350 EGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSA 409
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
+G + + A + IE+ P++ ++L+NIY + G+WD+V K+R M++ R K
Sbjct: 410 SMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIA 469
Query: 492 GCSWIEVDKQVHQF 505
GCS + V+ +VH+F
Sbjct: 470 GCSSMLVNGKVHEF 483
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 198/614 (32%), Positives = 309/614 (50%), Gaps = 108/614 (17%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDH 71
N L +L C +LKQ+ S + G T F KL+ FC + NL+YA +F+
Sbjct: 32 NHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFES 91
Query: 72 LTTPNTYLYTAMI--TAYASQPAHA---------------SSAFS-LYRDMVRRGQPQPN 113
+ PN +++ MI + +S P A S F L + + G Q
Sbjct: 92 IEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEG 151
Query: 114 QFIYPHVLK----SCPDV------LESRGTKMVHTQIVKSG------------------- 144
+ I+ HVLK S P V + ++ ++ + ++V S
Sbjct: 152 KQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLR 211
Query: 145 ---------FEQYPVVET----ALVNSYSRSGNDIGIARKLFDEMSDRNVV--------- 182
FE+ PV + A++ Y++SG A F EM NV
Sbjct: 212 GCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGR-FEEALAFFQEMKRANVAPNESTMVTV 270
Query: 183 -----------------SW-------------TAMISGYTRVGDIKNAASLFDSMPDRDV 212
SW A+I Y++ GD+ A LF+ + ++D+
Sbjct: 271 LSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDI 330
Query: 213 PAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVI 272
+WN +I G + + +A++ FR+M N+ PN VT V L A + G L LGK I
Sbjct: 331 ISWNVMIGGYSHMNSYKEALALFRKMQ---QSNVEPNDVTFVSILPACAYLGALDLGKWI 387
Query: 273 HGYVYRNGLDL-DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
H Y+ + L L ++ + +LIDMY KCG+++ A++ F K L SWN+MI+ A+HG
Sbjct: 388 HAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGH 447
Query: 332 SENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE 391
+ ++ +F +M +D PD +TF+ +L+AC+H GLVE GR F M + Y I P+++
Sbjct: 448 ANMALELFRQM---RDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQ 504
Query: 392 HYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
HYGC++DLLGRAG F+EA ++K M+++PD +WGSLL C+++G + EFA K L E+
Sbjct: 505 HYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFEL 564
Query: 452 DPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKT 511
+P N G ++L+NIY G+WD+V ++R L D+ K PGCS IEVD VH+F DK
Sbjct: 565 EPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKV 624
Query: 512 HPRTEEIYDALESM 525
H ++++IY L+ +
Sbjct: 625 HEQSQDIYKMLDEI 638
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 179/471 (38%), Positives = 278/471 (59%), Gaps = 16/471 (3%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
LKL + +A + L P + + M+ YAS S+ S++ + + F
Sbjct: 86 LKLGHQVHAHMLLRGLQ-PTALVGSKMVAFYASS-GDIDSSVSVFNGI-------GDYFT 136
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+P VLKS ++L K VH I++ G + V T+L+ Y + G +I A K+FD M
Sbjct: 137 FPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCG-EINDAGKVFDNM 195
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+ R+V SW A+++GYT+ G I A ++F+ MP R++ +W ++I+G +Q+GL A+S F
Sbjct: 196 TIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFD 255
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M E S +RPN VT++ L A L+ G+ IH R GL+ ++ + AL MY
Sbjct: 256 EMVKEDS-GVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYA 314
Query: 297 KCGSLKEARRAFDR--NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
KCGSL +AR FD+ ++K L +WN+MI ++A +G ++ F EM++ I+PD
Sbjct: 315 KCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQA---GIQPDD 371
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
+TF LL+ C+H GLV+ G YF M+ TY I P++EHY C+ DLLGRAGR EA ++V
Sbjct: 372 ITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVG 431
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M + +WGSLL C+ + + AE A +KL ++P N G ++L+N+Y E G+W E
Sbjct: 432 EMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQE 491
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
V K+R ++K + K+PGCSWIE++ + H F D +HP+ +EIY LE++
Sbjct: 492 VDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEAL 542
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 183/508 (36%), Positives = 281/508 (55%), Gaps = 46/508 (9%)
Query: 55 CTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQ 114
C+LK +L YA IF PN +++ A+I A S ++ R +P++
Sbjct: 83 CSLK--SLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFV--LMLRLSIRPDR 138
Query: 115 FIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
P VLKS +++ + +H ++K G E V +LV+ Y + G ++G +LFD
Sbjct: 139 LTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIG-ELGFGLQLFD 197
Query: 175 EMSDRN----VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC-------- 222
E RN ++ W +I+G +VGD+ AASLF++MP+R+ +WNS+I G
Sbjct: 198 ESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDR 257
Query: 223 -----------------------TQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
+QNG A+S F RM + + +RPN +T+V AL A
Sbjct: 258 ARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRM---LEEGVRPNDLTVVSALLA 314
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSW 319
G LQ+G+ IH Y+ NG L+ I AL+DMY KCG++K A R F K L +W
Sbjct: 315 CTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTW 374
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
+ MI +A+HG + ++ F +M + I PD V F+++L AC+H G V+QG +F+
Sbjct: 375 SVMIWGWAIHGCFDQALQCFVKM---KSAGINPDEVIFLAILTACSHSGNVDQGLNFFES 431
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
M Y IEP ++HY +VDLLGRAGR +EAL ++ M I PD V+WG+L C+ + +
Sbjct: 432 MRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIE 491
Query: 440 FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVD 499
AE +KL++++P + G + L+N+Y +G+W++V +VR ++K+R K PG S+IEV+
Sbjct: 492 MAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVE 551
Query: 500 KQVHQFHSLDKTHPRTEEIYDALESMVA 527
QVH F + D H R EEI LE + A
Sbjct: 552 GQVHSFVAGDHAHVRAEEISLKLEEITA 579
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 136/306 (44%), Gaps = 31/306 (10%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T +IS + + A S+F ++ +N++I G +N F ++S F M +
Sbjct: 76 TQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLM---LRL 132
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+IRP+++TL L ++ + LG+ +HG V + GL+ DSF+ +L+DMY K G L
Sbjct: 133 SIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFG 192
Query: 305 RRAFD----RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+ FD RN + + WN +IN G + +FE M R G ++ SL
Sbjct: 193 LQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPE------RNAG-SWNSL 245
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM---K 417
+N G +++ R F M E + + +++ + G E+AL + M
Sbjct: 246 INGFVRNGDLDRARELFVQMP-----EKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEG 300
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNG-----GYGIMLANIYGELGKW 472
+ P+++ S L C G E ++ +NG G G L ++Y + G
Sbjct: 301 VRPNDLTVVSALLACTKIGALQVGE----RIHNYLSSNGFQLNRGIGTALVDMYAKCGNI 356
Query: 473 DEVRKV 478
+V
Sbjct: 357 KSASRV 362
>gi|255578276|ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530484|gb|EEF32367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 499
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 182/494 (36%), Positives = 290/494 (58%), Gaps = 32/494 (6%)
Query: 18 AILERCNHINHLKQLQ--SFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHLTT 74
+I E C +NHLKQ+ S LT L K++RF + S +L YA+ +FD +
Sbjct: 21 SIAENCQSMNHLKQIHAHSLLTDLHNHSVIL--GKMLRFAAVSPSGDLPYAQRLFDQMPQ 78
Query: 75 PNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS--------- 123
PNT+ Y +I YA S P++ + F + +R+ P++F + ++K+
Sbjct: 79 PNTFFYNTIIRGYAKSSSPSYCVNLF----NQMRQNHVDPDEFTFNFLIKARSRVHKVHN 134
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
P LE +H + K GF + V+ AL+N Y+ G+ A ++F+E +VVS
Sbjct: 135 FPSTLE---CDEIHGAVFKYGFCSHLFVQNALINLYAVKGSPAA-AWRVFNETVGVDVVS 190
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
W+ ++ + R G+++ A +FD MP++DV +W ++++G ++ +A+ F E+S
Sbjct: 191 WSGLVLAHVRGGELELARQVFDDMPEKDVVSWTAMVSGYSKANCSREALELF----WEMS 246
Query: 244 D-NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
D IRP++VT+V +SA + G ++ G +H Y+ NG + NALI+MY KCG +
Sbjct: 247 DAGIRPDEVTIVSVISACTNLGDVETGMNVHSYINENGFGWMVSLCNALINMYAKCGCVD 306
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
A R F+ +K L +WNSMI++ A HG +E++ +F M+ + I PDG+TF++LL
Sbjct: 307 RAWRVFNNMKRKSLITWNSMISACANHGYAEDAFELFSCML---NSGIAPDGITFLALLI 363
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
A TH GLV++G F++M + Y IE IEHYGC+VD+LGRAGR EEA E++ M I ++
Sbjct: 364 AYTHKGLVDEGYRLFQIMERDYGIEASIEHYGCIVDMLGRAGRLEEAYELIVTMPIPSND 423
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
+VWG+LL C+IYG + E VKKL+E+ P+ GGY I+L +IY G+ E +R+ +
Sbjct: 424 IVWGALLAACRIYGDVNMGERVVKKLLELKPDEGGYYILLRDIYVASGRTAEANHIRQAM 483
Query: 483 KDRNAYKTPGCSWI 496
++ A K PG SW+
Sbjct: 484 QESGAMKNPGYSWV 497
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 184/546 (33%), Positives = 299/546 (54%), Gaps = 49/546 (8%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDHLTTPNTY 78
L++ I LK+L + + L Q KL+R + LT R +FD ++ N
Sbjct: 28 LDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLT--RKVFDEMSDRNVV 85
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHT 138
Y MI +Y + + ++R+MV G +P+ + YP VLK+C R ++H
Sbjct: 86 FYNVMIRSYVNNHRY-DDGLLVFREMVN-GGFRPDNYTYPCVLKACSCSENLRYGLLIHG 143
Query: 139 QIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT---RVG 195
++K G + V L+ Y + G + AR++FDEM ++VVSW +M++GY R
Sbjct: 144 DVLKVGLDFNLFVGNGLIAMYGKCGC-LFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFD 202
Query: 196 D--------------------------IKNAAS--------LFDSMPDRDVPAWNSVIAG 221
D + N +S +F ++ +++ +WN +I
Sbjct: 203 DALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRV 262
Query: 222 CTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL 281
+N L + A+ + +M + P+ +T L A G L LG+ IH YV + L
Sbjct: 263 YMKNSLPTQAVDLYLQME---KCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKL 319
Query: 282 DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEE 341
+ + N+LIDMY +CG L +A+R FDR + + SW S+I+++ + GQ N++ +F E
Sbjct: 320 CPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTE 379
Query: 342 MMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG 401
M+ + PD + F+++L+AC+H GL+++GR YFK MT YRI P+IEHY CLVDLLG
Sbjct: 380 ML---NSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLG 436
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIM 461
RAGR +EA ++K M IEP+E VW +LL+ C+++ D A L+++ P GY ++
Sbjct: 437 RAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVL 496
Query: 462 LANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDA 521
L+NIY + G+W EV ++R ++K + KTPG S +E++ QVH F + D +HP+++EIY+
Sbjct: 497 LSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEE 556
Query: 522 LESMVA 527
L +VA
Sbjct: 557 LGVLVA 562
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 181/503 (35%), Positives = 279/503 (55%), Gaps = 46/503 (9%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRF---CTLKLSNLTYARFIFDHLTTP-NTYLYTAMIT 85
+QL + L G A +LV C L ++ AR +FD + N +L+ +I
Sbjct: 83 RQLHARLLVSGLGLDAVLATRLVDLYASCGL----VSVARRLFDEMPNQGNVFLWNVLIR 138
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
AYA + +A LYR+M+ G +P+ F YP VLK+C +L+ + VH +++++ +
Sbjct: 139 AYA-RDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSW 197
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
+V +I Y + G + A ++FD
Sbjct: 198 AA--------------------------------DVFVCAGLIDMYAKCGCVDEAWAVFD 225
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
S RD WNS+IA C QNG ++A++ R M E I P VTLV A+SA G
Sbjct: 226 STTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAE---GIAPTIVTLVSAISAAADAGA 282
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L G+ +HGY +R G + +L+DMY K G + AR FD+ + L SWN+MI
Sbjct: 283 LPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICG 342
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
F +HG ++++ +F M + + PD +TF+ +L+AC HGG+V++ + F LM Y
Sbjct: 343 FGMHGHADHACELFRRMR--NEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYS 400
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
I+P ++HY CLVD+LG +GRF+EA +V+KGM ++PD +WG+LLNGCKI+ + AE A+
Sbjct: 401 IKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELAL 460
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
KLIE++P + G ++L+NIY + GKW+E +VRK++ +R K CSWIE+ + H F
Sbjct: 461 HKLIELEPEDAGNYVLLSNIYAQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGF 520
Query: 506 HSLDKTHPRTEEIYDALESMVAL 528
D +HPR++EIY+ LE + L
Sbjct: 521 LVGDASHPRSDEIYEELERLEGL 543
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 89/172 (51%), Gaps = 9/172 (5%)
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR-NSKKRLTSWNSMINSFA 327
G+ +H + +GL LD+ ++ L+D+Y CG + ARR FD ++ + WN +I ++A
Sbjct: 82 GRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPNQGNVFLWNVLIRAYA 141
Query: 328 LHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIE 387
G E +I ++ EM+ C ++ PD T+ +L AC L++ G A ++ + R
Sbjct: 142 RDGPREAAIELYREMLACG--SMEPDNFTYPPVLKAC--AALLDLG-AGREVHDRVMRTS 196
Query: 388 PQIEHYGC--LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
+ + C L+D+ + G +EA V + D VVW S++ C GR
Sbjct: 197 WAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVR-DAVVWNSMIAACGQNGR 247
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 192/565 (33%), Positives = 309/565 (54%), Gaps = 56/565 (9%)
Query: 3 SVTNQLNQTLNQQV------LAILERCNHINHLKQLQSFL--TTLGQSQTNFYAFK--LV 52
S T LN Q + +++L+ C + L QL + L T+L + + YAF L+
Sbjct: 15 SKTTALNSQQKQHLRKPDHAISLLQNCKNPKDLIQLHTLLIKTSLIKEK---YAFGRLLL 71
Query: 53 RFCTL-KLSNLTYARFIFDHLTTP-NTYLYTAMITAYASQPAHASSAFSLY-RDMVRRGQ 109
F + L +L YA+ +FD + P N+++YT MI AYA+ + AF+ Y R + +
Sbjct: 72 SFASFDNLGSLNYAQKLFDTVDIPRNSFMYTTMIKAYANF-GNPREAFAFYSRMLCDQRY 130
Query: 110 PQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFE----------------------- 146
PN F + +V +C K H Q++K FE
Sbjct: 131 VYPNDFTFTYVFSACSKFNGVFEGKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGIVV 190
Query: 147 -------QYPVVET--ALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
+ P V + L+N Y +SG D+ AR+LFDEM +R+VVSWT M+ GY G +
Sbjct: 191 RRVFDKIEGPDVVSWNCLINGYVKSG-DLDEARRLFDEMPERDVVSWTIMLVGYADAGFL 249
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
A+ LFD MP R++ +W+++I G Q G +S A+ F+ M + ++ ++V + L
Sbjct: 250 SEASCLFDEMPKRNLVSWSALIKGYIQIGCYSKALELFKEMQVA---KVKMDEVIVTTLL 306
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
SA G L G+ +H Y+ ++G+ +D+ +S ALIDMY KCG + A + F K++
Sbjct: 307 SACARLGALDQGRWLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVF 366
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
W+SMI A+H E +I +F +M+ C I P +T+I++L ACTH GLV+ G F
Sbjct: 367 VWSSMIGGLAMHSFGEKAIELFAKMIEC---GIEPSEITYINILAACTHSGLVDVGLQIF 423
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
M + + +P+++HYGC+VDLLGRAG +A VV+ M ++ D +W +LL+ CK++
Sbjct: 424 NRMVENQKPKPRMQHYGCIVDLLGRAGLLHDAFRVVETMPVKADPAIWRALLSACKLHRN 483
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
+ E + LI+++P N ++ +N+Y + +WD K+R+ +K R K PGCS IE
Sbjct: 484 VELGEQVGRILIKMEPQNDMNYVLFSNVYAAVNRWDISGKLRREMKVRGMQKNPGCSSIE 543
Query: 498 VDKQVHQFHSLDKTHPRTEEIYDAL 522
++ VH+F S D +HP+++ IY+ L
Sbjct: 544 LNGAVHEFVSRDHSHPQSQVIYELL 568
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 181/521 (34%), Positives = 291/521 (55%), Gaps = 39/521 (7%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNL-TYARF 67
N + N L +LE+C ++ LKQ+ + + T G F+ + L R + + + T+A
Sbjct: 5 NPSSNHPTLQLLEKCKTLDTLKQVHAHMITTG---LIFHTYPLSRILLISSTIVFTHALS 61
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
IF+H+ P +LY +I++ A+ H AFSLY ++ +PN F +P + K+C
Sbjct: 62 IFNHIPNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQ 121
Query: 128 LESRGTKMVHTQIVKSGFEQY---PVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
R + +HT ++K F + P V+ AL+N Y++ G +G R LF+++S ++ SW
Sbjct: 122 PWLRHGRALHTHVLK--FLEPTCDPFVQAALLNYYAKCGK-VGACRYLFNQISKPDLASW 178
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+++S Y + N+ ++ C L + ++ F M +
Sbjct: 179 NSILSAY-----VHNSGAI------------------CEDVSLSLEVLTLFIEMQKSL-- 213
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
I+ N+VTLV +SA G L G H YV ++ L L+ F+ ALIDMY KCG L A
Sbjct: 214 -IKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLA 272
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ FD+ + +N+MI FA+HG ++ +F++M + PD VT + + +C
Sbjct: 273 CQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTL---EGLAPDDVTLVVTMCSC 329
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLVE+G F+ M + Y +EP++EHYGCLVDLLGRAGR EA E V M ++P+ V+
Sbjct: 330 SHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVI 389
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
W SLL +++G + E +K LI+++P G ++L+N+Y + +WD+V++VRK++KD
Sbjct: 390 WRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMKD 449
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PG S +EV +H+F DKTHPR++EIY LE M
Sbjct: 450 HGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEM 490
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 185/549 (33%), Positives = 286/549 (52%), Gaps = 53/549 (9%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYL 79
+ C + + L + G ++ F A L+ L+L AR +FD + P +
Sbjct: 27 FKSCPTLPLARALHAVAEVSGLARDPFVASSLLH-AYLRLGTTGNARALFDGMPRPQRTV 85
Query: 80 --YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC------------- 124
++A++ A+A++ A A+ L +M R G +PN + ++
Sbjct: 86 VGWSALVAAHAAR-GDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVAL 144
Query: 125 ----------PDV--------------LESRGTKMVHTQIVKSGFEQYPVVETALVNSYS 160
PD L S G ++ H VK+G V TAL++ Y
Sbjct: 145 ATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQL-HGYAVKAGCRADACVVTALIDMYG 203
Query: 161 RSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR----DVPAWN 216
+ G + R +FDE S +V S A+I+G +R + A LF DR +V +W
Sbjct: 204 KCGQAAEVVR-VFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWT 262
Query: 217 SVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV 276
S++A C QNG +A+ FFR M + ++ PN VT+ C L A + L G+ H +
Sbjct: 263 SIVACCVQNGKDLEAVEFFREMQAQGTE---PNSVTIPCVLPAFANVAALMHGRSAHCFA 319
Query: 277 YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSI 336
R G D ++S+AL+DMY KCG +K+AR FD + + SWN+MI +A++G++ N++
Sbjct: 320 LRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAV 379
Query: 337 CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCL 396
+F M++C+ +PD VTF LL ACT GL E+GR YFK M Y + P++EHY C+
Sbjct: 380 WMFHSMLKCKQ---KPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACM 436
Query: 397 VDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNG 456
V LLGRAG+ +EA +++ M EPD +WGSLL C+++G D AE A +KL ++P N
Sbjct: 437 VTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENA 496
Query: 457 GYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTE 516
G ++L+NIY WD V +VR+M+KD K GCSWIE+ +VH + D +HP
Sbjct: 497 GNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMT 556
Query: 517 EIYDALESM 525
I + + +
Sbjct: 557 AIIEKINQL 565
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 170/369 (46%), Gaps = 53/369 (14%)
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
P+ + P KSCP + +R +H SG + P V ++L+++Y R G G AR
Sbjct: 18 PDPHLLPTAFKSCPTLPLARA---LHAVAEVSGLARDPFVASSLLHAYLRLGT-TGNARA 73
Query: 172 LFDEMS--DRNVVSWTAMISGYTRVGDIKNAASLFDSM-----PDRDVPAWNSVIAGCTQ 224
LFD M R VV W+A+++ + GD + A L + M + +V WN +++G +
Sbjct: 74 LFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNR 133
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
+G DA+ M E +RP+ + CALSA+G G++ +G+ +HGY + G D
Sbjct: 134 SGRARDAVVALATMHGE--GLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRAD 191
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
+ + ALIDMYGKCG E R FD +S + S N++I + + Q ++ +F+E +
Sbjct: 192 ACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFV- 250
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC--------- 395
D + + V++ S++ C G + +F+ M + EP C
Sbjct: 251 --DRGVELNVVSWTSIVACCVQNGKDLEAVEFFREM-QAQGTEPNSVTIPCVLPAFANVA 307
Query: 396 --------------------------LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
LVD+ + GR ++A + M + + V W +++
Sbjct: 308 ALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTM-VSRNVVSWNAMI 366
Query: 430 NGCKIYGRT 438
G +YG
Sbjct: 367 GGYAMYGEA 375
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 166/384 (43%), Positives = 246/384 (64%), Gaps = 9/384 (2%)
Query: 144 GFEQYPVV--ETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAA 201
G Q P V TA+++ ++ G D+ A++LFD M ++++VS TAM++ Y + G++ A
Sbjct: 86 GRTQNPSVFFWTAIIHGHALRG-DVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAAR 144
Query: 202 SLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIG 261
LFD M +RD WN +I G TQNG+ ++A+ FRRM + +PN+VT++ LSA G
Sbjct: 145 VLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM---LKAKAKPNEVTVLSVLSACG 201
Query: 262 HTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNS 321
G L+ G+ +H Y+ NG+ + + AL+DMY KCGSL++AR FD+ K + +WNS
Sbjct: 202 QLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNS 261
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
MI +A+HG S+ ++ +F+ M R H P +TFI +L+AC H G V +G F M
Sbjct: 262 MIVGYAMHGFSQEALQLFKSMCRMGLH---PTNITFIGILSACGHSGWVTEGWDIFNKMK 318
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
Y IEP+IEHYGC+V+LLGRAG E+A E+VK M IEPD V+WG+LL C+++G+
Sbjct: 319 DEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALG 378
Query: 442 EFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQ 501
E V+ L++ + N G I+L+NIY +G WD V ++R M+KD K PGCS IEV+ +
Sbjct: 379 EKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNK 438
Query: 502 VHQFHSLDKTHPRTEEIYDALESM 525
VH+F + HP+ +EIY LE +
Sbjct: 439 VHEFLAGGLNHPKRKEIYMMLEEI 462
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 135/327 (41%), Gaps = 73/327 (22%)
Query: 55 CTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQ 114
C K L AR +FD + + + MI Y +Q + A L+R M++ + +PN+
Sbjct: 133 CYAKHGELDAARVLFDGMEERDGVCWNVMIDGY-TQNGMPNEALVLFRRMLK-AKAKPNE 190
Query: 115 FIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
VL +C + + VH+ I +G + V TALV+ YS+ G+ + AR +FD
Sbjct: 191 VTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGS-LEDARLVFD 249
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
++ D++VV+W +MI GY G + A LF SM C
Sbjct: 250 KIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSM--------------C------------ 283
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
RMG+ P +T + LSA GH+G + G D I N + D
Sbjct: 284 --RMGL------HPTNITFIGILSACGHSGWVT-----------EGWD----IFNKMKDE 320
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
YG + ++ + M+N G E + + + M NI PD
Sbjct: 321 YG---------------IEPKIEHYGCMVNLLGRAGHVEQAYELVKNM------NIEPDP 359
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMT 381
V + +LL AC G + G +L+
Sbjct: 360 VLWGTLLGACRLHGKIALGEKIVELLV 386
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 180/514 (35%), Positives = 288/514 (56%), Gaps = 45/514 (8%)
Query: 18 AILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
++LE C L KQL + L LG + A KLV F ++ ++L A +FD +
Sbjct: 63 SLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSV-CNSLRNAHHLFDKIPK 121
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
N +L+ +I AYA H +A SLY M+ G +P+ F P VLK+C + +
Sbjct: 122 GNLFLWNVLIRAYAWNGPH-ETAISLYHQMLEYGL-KPDNFTLPFVLKACSALSTIGEGR 179
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
++H ++++SG+E R+V A++ Y +
Sbjct: 180 VIHERVIRSGWE--------------------------------RDVFVGAALVDMYAKC 207
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + +A +FD + DRD WNS++A QNG +++S M + +RP + TLV
Sbjct: 208 GCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMA---AKGVRPTEATLV 264
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
+S+ L G+ IHG+ +R+G + + ALIDMY KCGS+K A F+R +K
Sbjct: 265 TVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREK 324
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
R+ SWN++I +A+HG + ++ +FE MM+ +PD +TF+ L AC+ G L+++GR
Sbjct: 325 RVVSWNAIITGYAMHGLAVEALDLFERMMK----EAQPDHITFVGALAACSRGRLLDEGR 380
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
A + LM + RI P +EHY C+VDLLG G+ +EA ++++ M + PD VWG+LLN CK
Sbjct: 381 ALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKT 440
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+G + AE A++KLIE++P++ G ++LAN+Y + GKW+ V ++R+++ D+ K CS
Sbjct: 441 HGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACS 500
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
WIEV +V+ F S D +HP + IY L+ + L
Sbjct: 501 WIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGL 534
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 186/524 (35%), Positives = 295/524 (56%), Gaps = 20/524 (3%)
Query: 10 QTLNQQVLAILE-RCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL--KLSNLTYAR 66
+ L + + I+E C +NH KQL + + Q+++ L+RF T + TY
Sbjct: 7 RVLEWEAVRIIESHCTTLNHAKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPH 66
Query: 67 FIFDHLTTPNTYLYTAMITAYASQ-PAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
+F + +PN +LY+A+I AYA P H S LY M+ P F + +
Sbjct: 67 LLFSQVHSPNPFLYSALIRAYARNGPFHHS--IRLYTSMLNN-NVSPVSFTFSALFSLLK 123
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
+ S G+++ H GF V +++ Y + G + ARK+FDEM R+VV+WT
Sbjct: 124 N--PSLGSQL-HLHAFLFGFVNDLYVGNTIIHMYVKFG-VLDCARKVFDEMPHRDVVTWT 179
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
+I Y R GD+ +A LF +P +D+ AW S++ G +QN + A+ FFR+M
Sbjct: 180 ELIVAYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMR---EAG 236
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYV--YRNGLDLDSFISNALIDMYGKCGSLKE 303
+ +++TLV A+SA G+ I R G + F+ +ALIDMY KCG+++E
Sbjct: 237 VVTDEITLVGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEE 296
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A F + + S++SMI FA+HG++ ++I +F EM+ ++ I+P+ VTF+ L A
Sbjct: 297 AYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEML---ENGIKPNHVTFVGLFTA 353
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C+H G+VEQG+ F M + Y + P +HY C+ DLLGRAG E+AL++V+ M +EP+
Sbjct: 354 CSHAGMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGG 413
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
VWG+LL I+G D AE A + L E++P+N G ++L+ Y KWD+V +VRK+++
Sbjct: 414 VWGALLGASHIHGNPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMR 473
Query: 484 DRNAYKTPGCSWIEVDKQ-VHQFHSLDKTHPRTEEIYDALESMV 526
++ K PGCSW+E +H+F + D HP EI AL+ ++
Sbjct: 474 EKQLRKNPGCSWVEAKNGIIHEFFAGDVKHPEINEIKKALDDLL 517
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 167/448 (37%), Positives = 268/448 (59%), Gaps = 9/448 (2%)
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHT 138
++ A+I+ + S S + DMVR Y VL +C + VH
Sbjct: 128 MWNALISGHNRSGRFELSCCS-FVDMVR-ASAMATAVTYVSVLSACGKGKDLLLGMQVHK 185
Query: 139 QIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIK 198
++++SG VE ALV+ Y+ G D+ A LF+ M R++ SWT++ISG R G +
Sbjct: 186 RVLESGVLPDQRVENALVDMYAECG-DMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVD 244
Query: 199 NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
A LFD MP+RD AW ++I G Q G F DA+ FR M + +R ++ T+V ++
Sbjct: 245 RARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQI---CKVRADEFTMVSVVT 301
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
A G L+ G+ Y+ R G+ +D F+ NALIDMY KCGS++ A F + +
Sbjct: 302 ACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFT 361
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
W ++I A++G+ E +I +F M+R PD VTF+ +L ACTH GLV++GR +F
Sbjct: 362 WTAIILGLAVNGRGEEAIDMFYRMLRALQ---TPDEVTFVGVLTACTHAGLVDKGREFFL 418
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
MT+ Y I P + HYGCL+D+LGRAG+ +EAL+ + M ++P+ +WG+LL C++YG +
Sbjct: 419 SMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNS 478
Query: 439 DFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV 498
+ E A ++L+E+DP+N I+L+N+Y + +W +VR++R+++ ++ K PGCS IE+
Sbjct: 479 EIGELAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEM 538
Query: 499 DKQVHQFHSLDKTHPRTEEIYDALESMV 526
+ +H+F + D++HP +EIY LE+++
Sbjct: 539 NGIIHEFVAADRSHPMNKEIYSKLENVL 566
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 159/419 (37%), Gaps = 84/419 (20%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L+ AR + D + ++ ++ + ++ A A Y M+ G +P+ + +P +L
Sbjct: 5 LSRARSLLDGIPHRRGRAASSSVSGHGAEEAVAG-----YVRMLA-GGARPDAYTFPSLL 58
Query: 122 KSCPDVLESRGTKM-----VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD-- 174
K+ + +H +VK G E ++L+ Y+ G+ L
Sbjct: 59 KAAAAARGAAVAAASVGGAIHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAAC 118
Query: 175 -EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
V W A+ISG+ R G + + F M
Sbjct: 119 LATGGGAPVMWNALISGHNRSGRFELSCCSFVDM-------------------------- 152
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
V + VT V LSA G L LG +H V +G+ D + NAL+D
Sbjct: 153 --------VRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVD 204
Query: 294 MYGKCGSL-------------------------------KEARRAFDRNSKKRLTSWNSM 322
MY +CG + AR FD ++ +W +M
Sbjct: 205 MYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAM 264
Query: 323 INSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK 382
I+ + G+ +++ F M C+ +R D T +S++ AC G +E G + ++
Sbjct: 265 IDGYVQVGRFRDALETFRYMQICK---VRADEFTMVSVVTACAQLGALETGE-WARIYMG 320
Query: 383 TYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
I+ + L+D+ + G E AL+V K M D+ W +++ G + GR + A
Sbjct: 321 RLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMH-NRDKFTWTAIILGLAVNGRGEEA 378
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 122/303 (40%), Gaps = 50/303 (16%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FDH+ +T +TAMI Y Q A +R M + + + ++F V+ +C
Sbjct: 246 ARDLFDHMPERDTIAWTAMIDGYV-QVGRFRDALETFRYM-QICKVRADEFTMVSVVTAC 303
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ + + + G + V AL++ YS+ G+ I A +F +M +R+ +W
Sbjct: 304 AQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGS-IERALDVFKDMHNRDKFTW 362
Query: 185 TAMISGYTRVGDIKNAASLF----DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
TA+I G G + A +F ++ D + V+ CT GL FF + M
Sbjct: 363 TAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFF--LSM 420
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ NI P V C LID+ G+ G
Sbjct: 421 TEAYNISPTVVHYGC-----------------------------------LIDVLGRAGK 445
Query: 301 LKEARRAFDRNS-KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
LKEA D+ K T W +++ S ++G SE E ++ + PD T
Sbjct: 446 LKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLL-----ELDPDNSTAYI 500
Query: 360 LLN 362
LL+
Sbjct: 501 LLS 503
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 180/516 (34%), Positives = 292/516 (56%), Gaps = 46/516 (8%)
Query: 10 QTLNQ-QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFI 68
++L+Q Q++++L+R HIN + + + L G SQ F F+L+R C+ K + YA I
Sbjct: 28 KSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCS-KCHAIDYASRI 86
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
F + PN YLYTA+I + S + A LY M+ P+ ++ +LK+C L
Sbjct: 87 FQYTHNPNVYLYTALIDGFVSS-GNYFDAIQLYSRMLH-DSILPDNYLMASILKACGSQL 144
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
R + VH++ +K G +V ++ Y + G ++G AR++
Sbjct: 145 ALREGREVHSRALKLGLSSNRLVRLRIMELYGKCG-ELGDARRV---------------- 187
Query: 189 SGYTRVGDIKNAASLFDSMPD----RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
F+ MP+ +D W ++I G +N + A+ FR GM+ +
Sbjct: 188 ---------------FEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFR--GMQ-GE 229
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
N+RPN+ T+VC LSA G L++G+ +H Y+ + ++L+ F+ NALI+MY +CGS+ EA
Sbjct: 230 NVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEA 289
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ FD + + ++N+MI+ +++G+S +I +F M+ +RP VTF+ +LNAC
Sbjct: 290 QTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMI---GRRLRPTNVTFVGVLNAC 346
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+HGGLV+ G F MT+ Y +EPQIEHYGC+VDLLGR GR EEA ++++ MK+ PD ++
Sbjct: 347 SHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIM 406
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
G+LL+ CK++ + E K L + + G ++L+++Y GKW E +VR +K+
Sbjct: 407 LGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKE 466
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYD 520
K PGCS IEV+ ++H+F D HPR E IY+
Sbjct: 467 AGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYE 502
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 308/563 (54%), Gaps = 57/563 (10%)
Query: 8 LNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYAR 66
++ + +++LE+C + LKQ+ S +G S + +++ FC S N+ YA
Sbjct: 2 ISHCFGESPISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAH 61
Query: 67 FIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPD 126
+FD + P+ +++ MI Y S+ +H + S+Y M+ +P++F +P LK
Sbjct: 62 QVFDTIPHPSMFIWNTMIKGY-SKISHPENGVSMYLLMLT-SNIKPDRFTFPFSLKGFTR 119
Query: 127 VLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
+ + K + VK GF+ V+ A ++ +S G + +A K+FD VV+W
Sbjct: 120 DMALQHGKELLNHAVKHGFDSNLFVQKAFIHMFSLCG-IVDLAHKVFDMGDACEVVTWNI 178
Query: 187 MISGYTRV-------------------------------------------GDIKNAASL 203
M+SGY RV G++ A +
Sbjct: 179 MLSGYNRVKQFKISKMLLVLSACSKLKDLEWGKHIFKYINGGIVEHMFAACGEMDEAQGV 238
Query: 204 FDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHT 263
FD+M RDV +W ++I G + F A++ FR M M N++P++ T+V L A
Sbjct: 239 FDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQM---SNVKPDEFTMVSILIACALL 295
Query: 264 GMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMI 323
G L+LG+ + + +N DSF+ NAL+DMY KCG++++A++ F +K +W +MI
Sbjct: 296 GALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMI 355
Query: 324 NSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT 383
A++G E ++ +F M+ + ++ PD +T+I +L AC +V++G+++F MT
Sbjct: 356 VGLAINGHGEEALAMFSNMI---EASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQ 408
Query: 384 YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEF 443
+ I+P + HYGC+VDLLG G EEALEV+ M ++P+ +VWGS L C+++ A+
Sbjct: 409 HGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADM 468
Query: 444 AVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVH 503
A K+++E++P NG ++L NIY KW+ + +VRK++ +R KTPGCS +E++ V+
Sbjct: 469 AAKQILELEPENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNGNVY 528
Query: 504 QFHSLDKTHPRTEEIYDALESMV 526
+F + D++HP+++EIY LE+M+
Sbjct: 529 EFVAGDQSHPQSKEIYAKLENMM 551
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 181/593 (30%), Positives = 300/593 (50%), Gaps = 79/593 (13%)
Query: 3 SVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNL 62
S N Q L+ + ++L++C I LKQ+ + L T + N + +K+ L +
Sbjct: 22 SKPNPNRQALSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIA-----DLKDF 76
Query: 63 TYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
YA F ++ P Y + MI ++ +S A Y M G +PN YP +
Sbjct: 77 AYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGL-KPNNLTYPFLFI 135
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSR--------------------- 161
+C ++L +M H +++ G ++ V +L+ Y+R
Sbjct: 136 ACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVS 195
Query: 162 -------------SGNDIGIARKLFD------------------EMSDRNVVSW------ 184
+G +G+ R++ + E+ D + +W
Sbjct: 196 WNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVV 255
Query: 185 -----------TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
+A+I Y + GD+ +A +FDSM +D WN++I G QNG+ +AI
Sbjct: 256 ENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIK 315
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
F+ M M + P+Q+TL+ LSA G L LGK + Y G D ++ AL+D
Sbjct: 316 LFQDMRMS---STAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVD 372
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
MY KCGSL A R F KK SWN+MI++ A HGQ++ ++ +F+ MM + + P+
Sbjct: 373 MYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMN-EGGTVSPN 431
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
+TF+ +L+AC H GLV++GR F +M+ ++ + P+IEHY C+VDL RAG EEA + V
Sbjct: 432 DITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFV 491
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
M +PDEV+ G+LL C+ D +E +K L+E++P+N G ++ + +Y L +WD
Sbjct: 492 MTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWD 551
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+ ++R ++K + KTPGCSWI+++ Q+H+FH+ D H EI+ L+ ++
Sbjct: 552 DSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLLI 604
>gi|356499342|ref|XP_003518500.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g29230-like [Glycine max]
Length = 446
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 172/438 (39%), Positives = 264/438 (60%), Gaps = 23/438 (5%)
Query: 95 SSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP----V 150
+ A+ ++ +M + + HV +C D++ +R F+ P V
Sbjct: 11 ADAYKVFAEMRDKNVFAWTAVVAAHV--ACHDMVSARRL-----------FDLAPQCDVV 57
Query: 151 VETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR 210
+ +V+ Y G D+ AR+LFD M D +V+SW ++SGY G+++ +F+ MP R
Sbjct: 58 LWNVIVSGYIELG-DMVAARELFDRMPDCDVMSWNTVLSGYANNGEVELFVKVFEEMPAR 116
Query: 211 DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK 270
+V +WN +I G +NGLF +A+ F+RM V + PN T+V LSA G L++GK
Sbjct: 117 NVYSWNGLIGGYVRNGLFKEALECFKRM--LVDGVVVPNDYTVVAVLSACSRLGDLEIGK 174
Query: 271 VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG 330
+H Y G + F+ NALIDMY KCG +++A FD K + +WN++INS A+H
Sbjct: 175 WVHVYADSIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINSLAMHX 234
Query: 331 QSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQI 390
+ +++ +FE M R + RPDGVTF+ +L+ACTH GLV G +F+ M Y I PQI
Sbjct: 235 HAADALSLFEGMKRAGE---RPDGVTFVGILSACTHMGLVRNGFLHFQSMVDDYLIVPQI 291
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE 450
EHYGC+VDLLGRAG +A+++V+ M +EPD V+W +LL C+ Y + AE A+++LIE
Sbjct: 292 EHYGCMVDLLGRAGLINQAVDIVRKMPMEPDVVIWAALLGACRXYKNVEMAELALQRLIE 351
Query: 451 IDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDK 510
++PNN G +ML+NIY +LG+ +V +++ ++D K PGCS I + V +F+SLD+
Sbjct: 352 LEPNNPGNFVMLSNIYKDLGRSQDVARLKVAMRDTGFRKVPGCSVIGCNDSVVEFYSLDE 411
Query: 511 THPRTEEIYDALESMVAL 528
HP T+ IY AL+ + L
Sbjct: 412 RHPETDSIYRALQGLTIL 429
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 100/245 (40%), Gaps = 16/245 (6%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F+ + N Y + +I Y A ++ M+ G PN + VL +C +
Sbjct: 109 VFEEMPARNVYSWNGLIGGYVRNGLF-KEALECFKRMLVDGVVVPNDYTVVAVLSACSRL 167
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
+ K VH G++ V AL++ Y++ G I A +FD + +++++W +
Sbjct: 168 GDLEIGKWVHVYADSIGYKGNLFVGNALIDMYAKCGV-IEKALDVFDGLDVKDIITWNTI 226
Query: 188 ISGYTRVGDIKNAASLFDSMPDR----DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
I+ +A SLF+ M D + +++ CT GL + F+ M V
Sbjct: 227 INSLAMHXHAADALSLFEGMKRAGERPDGVTFVGILSACTHMGLVRNGFLHFQSM---VD 283
Query: 244 DN-IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
D I P C + +G G++ I V + ++ D I AL+ G C K
Sbjct: 284 DYLIVPQIEHYGCMVDLLGRAGLINQAVDI---VRKMPMEPDVVIWAALL---GACRXYK 337
Query: 303 EARRA 307
A
Sbjct: 338 NVEMA 342
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 185/539 (34%), Positives = 302/539 (56%), Gaps = 29/539 (5%)
Query: 3 SVTNQLNQTLNQQVL---AILERCNHINH-----LKQLQSFLTTLGQSQTN-------FY 47
++ + L+ +LNQ ++L C + N L Q FL+ + Q + +Y
Sbjct: 102 TMISALSLSLNQSFAFYNSLLSSCIYPNRSTFLFLLQASKFLSQVMQIHCHAIITGSFYY 161
Query: 48 AFKLVRFCTLKLSN--LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMV 105
+ + L N + A +F + P+ + MI YA + H A +MV
Sbjct: 162 GYLQNTLMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKK-GHNIEALKFLHEMV 220
Query: 106 RRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP--VVETALVNSYSRSG 163
G +P++F +L C + +++ K VH I + G + ++ AL++ Y +
Sbjct: 221 GLGL-KPDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKC- 278
Query: 164 NDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCT 223
++ IA+ +F+ + ++ +SW MI+GY +VG+++ A + F+ MP RD+ +WNS+IAG
Sbjct: 279 KELRIAQSIFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYA 338
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL 283
Q G D + R V++NI P+ VT++ +SA G L G+ IHG+V R + +
Sbjct: 339 QKG---DCLMVQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQMKI 395
Query: 284 DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
D+F+ +A IDMY KCGS+K A F ++K +T W +MI FA HG ++ +F EM
Sbjct: 396 DAFLGSAFIDMYWKCGSIKRACMVFREVTEKDVTVWTTMITGFAFHGYGSKALQLFYEM- 454
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
Q++ + P+ VTF+++L AC+H G V QG F M + Y IEP +EHYGCLVDLLGR+
Sbjct: 455 --QEY-VMPNQVTFVAVLTACSHSGFVSQGLRIFNSMKERYGIEPGVEHYGCLVDLLGRS 511
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLA 463
GRF E +V++ M ++P +WG++L+ C+ YG + AE A K+L++++P G ++L+
Sbjct: 512 GRFSEVKDVIEMMPMKPSRSIWGAVLSACRAYGNIEIAEIAGKELLKLEPEKEGGYVLLS 571
Query: 464 NIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
NIY G+W K+R++++ R KT GCS + VD +H+F + DK HPR EI L
Sbjct: 572 NIYATSGRWKHSDKIREIMESRGVKKTAGCSSVVVDGIIHEFVAADKRHPRWIEIQSIL 630
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 200/461 (43%), Gaps = 82/461 (17%)
Query: 11 TLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIF 69
L L +LE+C+ +H KQ+ + + + F +L+ F + NL A +F
Sbjct: 29 ALKHATLILLEKCSTRDHFKQILAQIMRINLIGQTFPMSRLILFSAITHPENLDMAVLLF 88
Query: 70 DHLTT-PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
H T PN Y+Y MI+A + + +F+ Y ++ PN+ + +L++ +
Sbjct: 89 RHHTPHPNLYIYNTMISALS---LSLNQSFAFYNSLLSSC-IYPNRSTFLFLLQASKFLS 144
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ +H + +G Y ++ L+ Y + +G+A ++F +M+ + VS+ MI
Sbjct: 145 Q---VMQIHCHAIITGSFYYGYLQNTLMKIYLEN-EKMGLAYQVFQQMAAPDAVSFNIMI 200
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
GY + G ++ +A+ F M V ++P
Sbjct: 201 FGYAKKG--------------HNI-----------------EALKFLHEM---VGLGLKP 226
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS--FISNALIDMYGKCGSLKEARR 306
++ T++ L G G QLGK +H ++ R GL S ++NAL+DMY KC L+ A+
Sbjct: 227 DEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQS 286
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD------------------- 347
F+ +K SWN+MI +A G E + FE+ M C+D
Sbjct: 287 IFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFED-MPCRDLVSWNSIIAGYAQKGDCLM 345
Query: 348 ----------HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY--GC 395
NI PD VT I+L++A G + GR + R++ +I+ +
Sbjct: 346 VQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHGRWIHGWVV---RMQMKIDAFLGSA 402
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
+D+ + G + A V + + E D VW +++ G +G
Sbjct: 403 FIDMYWKCGSIKRACMVFREVT-EKDVTVWTTMITGFAFHG 442
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/513 (33%), Positives = 291/513 (56%), Gaps = 15/513 (2%)
Query: 18 AILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
++L+ C ++ K++ F+ G + F L+ + + + YAR +FD +
Sbjct: 129 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYG-ECACVEYARLVFDKMME 187
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
+ ++ MI + S+ A L R+M Q +P++ ++ D R K
Sbjct: 188 RDVVSWSTMIRSL-SRNKEFDMALELIREM-NFMQVRPSEVAMVSMVNLFADTANMRMGK 245
Query: 135 MVHTQIVKSGFEQYPVVET--ALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+H ++++ ++ V T AL++ Y++ G+ +G+AR+LF+ ++ + VVSWTAMI+G
Sbjct: 246 AMHAYVIRNSNNEHMGVPTTTALLDMYAKCGH-LGLARQLFNGLTQKTVVSWTAMIAGCI 304
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
R ++ A +LFDS +RDV W ++++ Q A + F +M + +RP +VT
Sbjct: 305 RSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMR---TSGVRPTKVT 361
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
+V LS G L LGK +H Y+ + +++D ++ AL+DMY KCG + A R F
Sbjct: 362 IVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAI 421
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+ + WN++I FA+HG E ++ +F EM R ++P+ +TFI LL+AC+H GLV +
Sbjct: 422 SRDICMWNAIITGFAMHGYGEEALDIFAEMER---QGVKPNDITFIGLLHACSHAGLVTE 478
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G+ F+ M T+ + PQIEHYGC+VDLLGRAG +EA E++K M I+P+ +VWG+L+ C
Sbjct: 479 GKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAAC 538
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+++ E A +L+EI+P N GY ++++NIY +W + VRK +K K PG
Sbjct: 539 RLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPG 598
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
S IEV+ VH+F D++HP+ I + L M
Sbjct: 599 HSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEM 631
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 199/467 (42%), Gaps = 110/467 (23%)
Query: 83 MITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQI 140
+IT+Y +QP +A + ++ R M + + F+ P VLK+C V ++ K +H +
Sbjct: 95 VITSYTKRNQPRNALNVYAQLRKM----DFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 150
Query: 141 VKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
+K G ++ V AL+ Y + AR +FD+M +R+VVSW+ MI +R
Sbjct: 151 LKKGLDRDVFVGNALMLMYGECAC-VEYARLVFDKMMERDVVSWSTMIRSLSR------- 202
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
N F A+ R M +RP++V +V ++
Sbjct: 203 ------------------------NKEFDMALELIREMNFM---QVRPSEVAMVSMVNLF 235
Query: 261 GHTGMLQLGKVIHGYVYRNGLD--LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
T +++GK +H YV RN + + + AL+DMY KCG L AR+ F+ ++K + S
Sbjct: 236 ADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVS 295
Query: 319 WNSMI----------NSFALHGQSEN-SICVFEEMM------RCQDH-----------NI 350
W +MI + AL ++N + ++ M+ C D +
Sbjct: 296 WTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGV 355
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGR------AG 404
RP VT +SLL+ C G ++ G+ + K R+E LVD+ + AG
Sbjct: 356 RPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE-RVEVDCILNTALVDMYAKCGDINAAG 414
Query: 405 RF-------------------------EEALEVVKGMK---IEPDEVVWGSLLNGCKIYG 436
R EEAL++ M+ ++P+++ + LL+ C G
Sbjct: 415 RLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAG 474
Query: 437 RTDFAEFAVKKLIE---IDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
+ +K++ + P YG M+ ++ G G DE ++ K
Sbjct: 475 LVTEGKKLFEKMVHTFGLVPQIEHYGCMV-DLLGRAGLLDEAHEMIK 520
>gi|147825156|emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
Length = 532
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 184/510 (36%), Positives = 292/510 (57%), Gaps = 13/510 (2%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTPNTY 78
L+ C ++ KQ+Q+F T G SQ + +A +L+ F + ++ ++ IF + +P
Sbjct: 12 LKNCRSMSEFKQIQAFFITSGLSQHHPFASRLLSFSAISSWGDIDHSYRIFLQIPSPTIS 71
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHT 138
+ ++I + S+ + + + S++ M+R G P+ YP V K+ + E R VH
Sbjct: 72 NWNSIIRGF-SKGKNPNPSVSVFVKMLRFGVC-PDHLTYPFVAKAVARLSELRLALAVHC 129
Query: 139 QIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIK 198
+I K G + +L++ Y G DIG ARK+FDEM RN VSW AM+ GY + GD+
Sbjct: 130 RIAKEGLWFDRFIANSLIHMYGSCG-DIGSARKVFDEMLIRNSVSWNAMLDGYAKCGDLD 188
Query: 199 NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
+A +F SMPDRDV +W+S+I GC + G + A++ F RM + + N VT+V L
Sbjct: 189 SAHQVFXSMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVV---GPKANXVTMVSVLC 245
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD--RNSKKRL 316
A H G L+ G+ +H Y+ N + + +L+DMY KCG+++EA F + +
Sbjct: 246 ACAHLGALEXGRXMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQTDV 305
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
WN++I A HG S+ +F+EM Q I PD +T++ L +AC HGGLV + +
Sbjct: 306 LMWNTIIGGLATHGLVXESLELFKEM---QVLGIVPDEITYLCLFSACAHGGLVHEAWHF 362
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
FK + K + P+ EHY C+VD+L RAG+ EA + + M +EP + G+LLNGC +
Sbjct: 363 FKSLGKQGMV-PKSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNHR 421
Query: 437 RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWI 496
R D AE +KLIE++P++ G I L+N+Y + WD R +R+ ++ R K+PG S++
Sbjct: 422 RFDLAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERRGVKKSPGFSFV 481
Query: 497 EVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
EV +H+F + DKTH E+IY L ++V
Sbjct: 482 EVLGTLHRFIAHDKTHNDLEKIYMMLNTIV 511
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 187/530 (35%), Positives = 298/530 (56%), Gaps = 44/530 (8%)
Query: 11 TLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARFIF 69
T +Q ++ + CN++ LKQ+ + L G + +L+ + +S + YA +F
Sbjct: 11 TNRKQPSSLWKNCNNLLALKQIHATLIIKGFNSNRAALRELIFAGAMTISGAINYAHQVF 70
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
+T P+ +++ M+ +SQ + S LY M RG +P++F + +LK C LE
Sbjct: 71 AQITEPDIFMWNTMMRG-SSQSKNPSKVVLLYTQMENRG-VKPDKFTFSFLLKGCTR-LE 127
Query: 130 SRGTKM-VHTQIVKSGFEQYPVVE-------------------------------TALVN 157
R T VH +++K GFE V +AL
Sbjct: 128 WRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSALTA 187
Query: 158 SYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNS 217
Y+R G ++G+AR++FDEM +++VSW MI+GY + G+++NA +LFD P++DV WN+
Sbjct: 188 GYARRG-ELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVVTWNT 246
Query: 218 VIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVY 277
+IAG G A+ F M V + P++VT++ LSA G LQ+G+ +H +
Sbjct: 247 MIAGYVLRGEQRQALEMFEEM-RNVGEC--PDEVTMLSLLSACADLGDLQVGRKLHCSIS 303
Query: 278 R-NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSI 336
DL + NAL+DMY KCGS++ A + F + +K +T+WNS+I A HG +E SI
Sbjct: 304 EMTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEESI 363
Query: 337 CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCL 396
+F EM + NI+P+ +TF+ ++ AC+H G VE+GR YFKLM + Y IEP + H+GC+
Sbjct: 364 KLFAEMQALK--NIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCM 421
Query: 397 VDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNG 456
VDLLGRAG EA E++ M+IEP+ ++W +LL C+++G + A ++L+++ +
Sbjct: 422 VDLLGRAGLLSEAFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRLANERLLKLRRDES 481
Query: 457 GYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV-DKQVHQF 505
G ++L+NIY G+WD +VRK++ D K G S IE D+ V QF
Sbjct: 482 GDYVLLSNIYASAGEWDGAEEVRKLMDDGGVRKEAGRSLIEADDRAVMQF 531
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 192/516 (37%), Positives = 286/516 (55%), Gaps = 22/516 (4%)
Query: 15 QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT----LKLSNLTYARFIFD 70
+V +L C + +L + G F+L R L L+ +T R D
Sbjct: 37 RVAGLLTGCATLRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLT-VTLLRLTPD 95
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
P T YT+ I A++S+ +A +L +M+ RG P L +C +
Sbjct: 96 ----PTTVFYTSAIHAHSSR-GLHLAALALLSEMLGRGLI-PTSHTLSSSLPACHGLALG 149
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
R +H K V TAL+ Y+R G D AR LFDEM D +VV TAM++
Sbjct: 150 RA---LHAYAFKLALAGDSYVATALLGMYAR-GGDADAARALFDEMPDPHVVPVTAMLTC 205
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y ++G + +A LFD MP +D WN++I G TQ+G ++A+ FR M + + P++
Sbjct: 206 YAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWM---LRSGVDPDE 262
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNG-LDLDSFISNALIDMYGKCGSLKEARRAFD 309
V ++ ALSA+ G + G+ +H YV + + L++ + ALIDMY KCGSL++A F+
Sbjct: 263 VAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFN 322
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
K + WN+MIN +A+HG S ++ +F ++ + + P +TFI LLNAC+H GL
Sbjct: 323 SIGDKDIVVWNAMINGYAMHGDSRKALEMFSQL---RSQGLWPTDITFIGLLNACSHSGL 379
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
V++G +F+ M + Y I P+IEHYGC+VDLLGRAG EEA +V+ M I PD V+W SLL
Sbjct: 380 VDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLL 439
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
C+++ + L+ N G I+L+NIY +G W+EV +VR M+K K
Sbjct: 440 AACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQK 499
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PGCS IEV ++V++F + D +HPRT+EIY LE M
Sbjct: 500 EPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKM 535
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/465 (37%), Positives = 280/465 (60%), Gaps = 16/465 (3%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ +FD + N + ++IT Y Q A +L+ M++ G P++ V+ +C
Sbjct: 201 AQKVFDAMPERNIVSWNSLITCY-EQNGPVDEALALFVRMMKDGF-VPDEVTLASVMSAC 258
Query: 125 PDVLESRGTKMVHTQIVKSG-FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
+ R + VHT++VKS F + V+ ALV+ Y++ G A+ +FD M+ R+VVS
Sbjct: 259 AGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWE-AKCVFDRMAIRSVVS 317
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
T+MI+GY + ++ +A ++F M +++V AWN +IA N +A+ F R+ E
Sbjct: 318 ETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRE-- 375
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS------FISNALIDMYGK 297
++ P T L+A + LQLG+ H +V + G DS F+ N+L+DMY K
Sbjct: 376 -SVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLK 434
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
GS+ + + F+R + + SWN+MI +A +G++++++ +FE M+ C N RPD VT
Sbjct: 435 TGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERML-CS--NERPDSVTM 491
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
I +L+AC H GLV++GR YF+ MT+ + I P +HY C++DLLGRAG +E E+++ M
Sbjct: 492 IGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMP 551
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+EPD V+W SLL C+++ D E+A KL E+DP+N G ++L+N+Y ELGKW +V +
Sbjct: 552 MEPDAVLWASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFR 611
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
VR+ +K R K PGCSWIE+ ++V+ F + D HP EI+D L
Sbjct: 612 VRRSMKHRGVSKQPGCSWIEIGRKVNVFLARDNIHPCRNEIHDTL 656
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 138/264 (52%), Gaps = 7/264 (2%)
Query: 155 LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA 214
L+++Y+R G+ + AR++FD M RN S+ A++S R+G +A +LF ++PD D +
Sbjct: 56 LLSAYARLGS-LHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQCS 114
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
+N+V+A Q+G DA+ F M +D+ N + ALSA + G+ +H
Sbjct: 115 YNAVVAALAQHGRGGDALRFLAAMH---ADDFVLNAYSFASALSACASEKASRTGEQVHA 171
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
V ++ D +I AL+DMY KC +EA++ FD ++ + SWNS+I + +G +
Sbjct: 172 LVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDE 231
Query: 335 SICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG 394
++ +F MM+ PD VT S+++AC +GR M K+ R +
Sbjct: 232 ALALFVRMMK---DGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNN 288
Query: 395 CLVDLLGRAGRFEEALEVVKGMKI 418
LVD+ + GR EA V M I
Sbjct: 289 ALVDMYAKCGRTWEAKCVFDRMAI 312
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 195/464 (42%), Gaps = 117/464 (25%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+L +L AR +FD + NT+ Y A+++A A + A A +L+ + P P+Q Y
Sbjct: 62 RLGSLHDARRVFDGMPHRNTFSYNALLSACA-RLGRADDALALFGAI-----PDPDQCSY 115
Query: 118 PHV-----------------------------------LKSCPDVLESRGTKMVHTQIVK 142
V L +C SR + VH + K
Sbjct: 116 NAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALVTK 175
Query: 143 SGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAAS 202
S + TALV+ Y++ A+K+FD M +RN+VSW ++I+ Y
Sbjct: 176 SSHGSDVYIGTALVDMYAKCERP-EEAQKVFDAMPERNIVSWNSLITCY----------- 223
Query: 203 LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGH 262
QNG +A++ F RM + D P++VTL +SA
Sbjct: 224 --------------------EQNGPVDEALALFVRM---MKDGFVPDEVTLASVMSACAG 260
Query: 263 TGMLQLGKVIHGYVYRNG-LDLDSFISNALIDMYGKCGSLKEARRAFDRNS--------- 312
+ G+ +H + ++ D ++NAL+DMY KCG EA+ FDR +
Sbjct: 261 LAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETS 320
Query: 313 ----------------------KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
+K + +WN +I ++A + + E ++ +F +R + ++
Sbjct: 321 MITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLF---VRLKRESV 377
Query: 351 RPDGVTFISLLNACTHGGLVEQG-RAYFKLMTKTYRIE--PQIEHY--GCLVDLLGRAGR 405
P T+ ++LNAC + ++ G +A+ ++ + +R + P+ + + LVD+ + G
Sbjct: 378 WPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGS 437
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
+ +V + M D V W +++ G GR A ++++
Sbjct: 438 ISDGAKVFERMAAR-DNVSWNAMIVGYAQNGRAKDALLLFERML 480
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 192/516 (37%), Positives = 286/516 (55%), Gaps = 22/516 (4%)
Query: 15 QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT----LKLSNLTYARFIFD 70
+V +L C + +L + G F+L R L L+ +T R D
Sbjct: 36 RVAGLLTGCATLRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLT-VTLLRLTPD 94
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
P T YT+ I A++S+ +A +L +M+ RG P L +C +
Sbjct: 95 ----PTTVFYTSAIHAHSSR-GLHLAALALLSEMLGRGLI-PTSHTLSSSLPACHGLALG 148
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
R +H K V TAL+ Y+R G D AR LFDEM D +VV TAM++
Sbjct: 149 RA---LHAYAFKLALAGDSYVATALLGMYAR-GGDADAARALFDEMPDPHVVPVTAMLTC 204
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y ++G + +A LFD MP +D WN++I G TQ+G ++A+ FR M + + P++
Sbjct: 205 YAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWM---LRSGVDPDE 261
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNG-LDLDSFISNALIDMYGKCGSLKEARRAFD 309
V ++ ALSA+ G + G+ +H YV + + L++ + ALIDMY KCGSL++A F+
Sbjct: 262 VAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFN 321
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
K + WN+MIN +A+HG S ++ +F ++ + + P +TFI LLNAC+H GL
Sbjct: 322 SIGDKDIVVWNAMINGYAMHGDSRKALEMFSQL---RSQGLWPTDITFIGLLNACSHSGL 378
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
V++G +F+ M + Y I P+IEHYGC+VDLLGRAG EEA +V+ M I PD V+W SLL
Sbjct: 379 VDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLL 438
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
C+++ + L+ N G I+L+NIY +G W+EV +VR M+K K
Sbjct: 439 AACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQK 498
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PGCS IEV ++V++F + D +HPRT+EIY LE M
Sbjct: 499 EPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKM 534
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/514 (35%), Positives = 282/514 (54%), Gaps = 43/514 (8%)
Query: 18 AILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
+IL+ C L+ QL L G + KLV + +AR +FD +
Sbjct: 67 SILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYA-ACGQVGHARRLFDGMPK 125
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
N +L+ +I AYA + +A LYR MV G +P+ F YP VLK+C +L+ +
Sbjct: 126 RNVFLWNVLIRAYAREGPR-EAAVRLYRGMVEHGV-EPDNFTYPLVLKACAALLDLETGR 183
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
VH ++ S +R G D+ + + D Y +
Sbjct: 184 EVHQRV-----------------SGTRWGQDVFVCAGVVDM---------------YAKC 211
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + +A ++FD + RD WNS+IA QNG +A++ R M ++ I P TLV
Sbjct: 212 GCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDM---AANGIGPTIATLV 268
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
A+SA L G+ +HG+ +R G L + +L+DMY K G ++ AR F++ K+
Sbjct: 269 SAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKR 328
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
L SWN+MI + +HG ++ ++ +F +M D + PD +TF+ +L+AC HGG+VE+ +
Sbjct: 329 ELVSWNAMICGYGMHGHADEALALFNKMK--GDAQVTPDNITFVGVLSACNHGGMVEEAK 386
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
+F LM Y I+P ++HY C++D+LG GRFEEA +++KGM IEPD +WG+LLNGCKI
Sbjct: 387 EFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKI 446
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+ + E A++KLIE++P + G + L+NIY + GKW++ +VRK++ +R K CS
Sbjct: 447 HKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACS 506
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
WIE+ + H F D +HPR++EIY LE + L
Sbjct: 507 WIELKGKTHGFLVGDASHPRSDEIYGELERLEGL 540
>gi|242037745|ref|XP_002466267.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
gi|241920121|gb|EER93265.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
Length = 537
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/474 (37%), Positives = 274/474 (57%), Gaps = 16/474 (3%)
Query: 64 YARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP----- 118
+AR +FD + P TAM A+A+ + A +++ DM+ G N +
Sbjct: 65 HARDLFDEMPDPGLVTRTAMARAHAAS-GQTAQALAVFGDMLADGVLPDNVALAVALAAC 123
Query: 119 HVLKSCPDVL----ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
H S P L R KMVH IV SG V T L+ Y G ++ ++R+LFD
Sbjct: 124 HGTGSFPAALGMAAARRPGKMVHALIVTSGIVPDVFVSTELIRLYGEYG-ELLVSRRLFD 182
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
M ++ VSW AM+ Y R ++ +A LF +MP RDV +WN++IAG G F +A+
Sbjct: 183 AMPVKSTVSWNAMVHQYIRHSNVGDAYELFLAMPKRDVVSWNTIIAGYCLIGRFMEALEL 242
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
FR+M S + PN T+ L+A G L+ G +H Y+ RN ++ D + +LIDM
Sbjct: 243 FRQMMSPSSCPVHPNGPTISTVLAACAGAGCLETGIWVHAYIDRNRMNDDGSLDRSLIDM 302
Query: 295 YGKCGSLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
Y KCGS+++A + F++ KR L SW ++I A+HG++ +++ +F M QD+ IRPD
Sbjct: 303 YAKCGSIEKALQVFEKAPGKRDLYSWTTVICGLAMHGKAADALRMFGMM---QDNGIRPD 359
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
VT + +LNAC HGGLV++G +F + K Y I P+IEHYGC++DLLGR GR +EA ++
Sbjct: 360 DVTLVGVLNACAHGGLVDEGLHHFYSLEK-YAITPKIEHYGCVIDLLGRVGRLQEAYSII 418
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
+ M+++P+ V+WG+ LN CK++ + E A +L +DP++ +ML+++Y + W
Sbjct: 419 RTMRMKPNAVIWGAFLNACKVHSNVELGEIAAAELTRLDPDDPWAKVMLSSLYAKAQDWS 478
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+ + R+ + KTPGCS IE+D +VH+F + HP+ EI LE++ A
Sbjct: 479 SLARERREMNSLQMKKTPGCSSIELDGEVHEFVAGSFQHPQHGEICTVLENVEA 532
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 134/295 (45%), Gaps = 45/295 (15%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
TA++S Y +G ++A LFD MPD + ++ +G + A++ F M ++D
Sbjct: 51 TALLSAYAALGRPRHARDLFDEMPDPGLVTRTAMARAHAASGQTAQALAVFGDM---LAD 107
Query: 245 NIRPNQVTLVCAL----------SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
+ P+ V L AL +A+G + GK++H + +G+ D F+S LI +
Sbjct: 108 GVLPDNVALAVALAACHGTGSFPAALGMAAARRPGKMVHALIVTSGIVPDVFVSTELIRL 167
Query: 295 YGKCGSLKEARRAFD------------------RNS-------------KKRLTSWNSMI 323
YG+ G L +RR FD R+S K+ + SWN++I
Sbjct: 168 YGEYGELLVSRRLFDAMPVKSTVSWNAMVHQYIRHSNVGDAYELFLAMPKRDVVSWNTII 227
Query: 324 NSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT 383
+ L G+ ++ +F +MM + P+G T ++L AC G +E G + +
Sbjct: 228 AGYCLIGRFMEALELFRQMMSPSSCPVHPNGPTISTVLAACAGAGCLETGIWVHAYIDRN 287
Query: 384 YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
R+ L+D+ + G E+AL+V + + D W +++ G ++G+
Sbjct: 288 -RMNDDGSLDRSLIDMYAKCGSIEKALQVFEKAPGKRDLYSWTTVICGLAMHGKA 341
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 271 VIHGYVYRNGL-DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
IHG +++ GL S + AL+ Y G + AR FD L + +M + A
Sbjct: 32 AIHGLLFKEGLLHAGSHLPTALLSAYAALGRPRHARDLFDEMPDPGLVTRTAMARAHAAS 91
Query: 330 GQSENSICVFEEMM 343
GQ+ ++ VF +M+
Sbjct: 92 GQTAQALAVFGDML 105
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/472 (37%), Positives = 269/472 (56%), Gaps = 11/472 (2%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+++ + A F+ + + + +MI+ + +Q + A ++ M+R P++F
Sbjct: 223 MQVGQMDLAMAQFEQMAERDIVTWNSMISGF-NQRGYDLRALDIFSKMLRDSLLSPDRFT 281
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE- 175
VL +C ++ + K +H+ IV +GF+ +V AL++ YSR G + AR+L ++
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG-VETARRLIEQR 340
Query: 176 -MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
D + +TA++ GY ++GD+ A ++F S+ DRDV AW ++I G Q+G + +AI+
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINL 400
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
FR M V RPN TL LS L GK IHG ++G +SNALI M
Sbjct: 401 FRSM---VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITM 457
Query: 295 YGKCGSLKEARRAFDRNSKKRLT-SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
Y K G++ A RAFD +R T SW SMI + A HG +E ++ +FE M+ +RPD
Sbjct: 458 YAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM---EGLRPD 514
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
+T++ + +ACTH GLV QGR YF +M +I P + HY C+VDL GRAG +EA E +
Sbjct: 515 HITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
+ M IEPD V WGSLL+ C+++ D + A ++L+ ++P N G LAN+Y GKW+
Sbjct: 575 EKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWE 634
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
E K+RK +KD K G SWIEV +VH F D THP EIY ++ +
Sbjct: 635 EAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKI 686
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 187/388 (48%), Gaps = 43/388 (11%)
Query: 120 VLKSCPDVLESRGTK--------MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
+L+ C ++L+ K +VH +++KSG + L+N YS++G + ARK
Sbjct: 12 LLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALH-ARK 70
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
LFDEM R SW ++S Y++ GD+ + FD +P RD +W ++I G G + A
Sbjct: 71 LFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKA 130
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
I R MG V + I P Q TL L+++ T ++ GK +H ++ + GL + +SN+L
Sbjct: 131 I---RVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSL 187
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH---GQSENSICVFEEMMRCQDH 348
++MY KCG A+ FDR + ++SWN+MI ALH GQ + ++ FE+M
Sbjct: 188 LNMYAKCGDPMMAKFVFDRMVVRDISSWNAMI---ALHMQVGQMDLAMAQFEQMA----- 239
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
D VT+ S+++ G + F M + + P L +L E
Sbjct: 240 --ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPD---RFTLASVLSACANLE- 293
Query: 409 ALEVVKGMKIEPDEVVWGSLLNG------CKIYGRTDFAEFAVKKLIE----IDPNNGGY 458
++ G +I V G ++G +Y R E A ++LIE D G+
Sbjct: 294 --KLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETA-RRLIEQRGTKDLKIEGF 350
Query: 459 GIMLANIYGELGKWDEVRKVRKMLKDRN 486
+L Y +LG ++ + + LKDR+
Sbjct: 351 TALLDG-YIKLGDMNQAKNIFVSLKDRD 377
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/458 (36%), Positives = 264/458 (57%), Gaps = 9/458 (1%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A +FD + + ++I Y + A +Y+ M+ +P++ V+ +C
Sbjct: 208 AHKVFDEGCVRDLVSWNSLINGYVRR-RQPREAMGIYQQMITE-HVKPDEVTMIGVVSAC 265
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ + + +H I +SG + AL++ Y + G D+ + LFD M + VVSW
Sbjct: 266 AQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCG-DLEAGKVLFDNMRKKTVVSW 324
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T MI GY + G + A LF MP+++V AWN++I C Q L +A+ FR M
Sbjct: 325 TTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQW---S 381
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
N++P++VT++ LSA G L G H Y+ ++ L LD + ALIDMY KCG++ +A
Sbjct: 382 NMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKA 441
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ F+ ++ +W ++I AL+G ++I F +M+ D + PD +TF+ +L AC
Sbjct: 442 LQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKMI---DSGLMPDEITFLGVLTAC 498
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
HGGLVE+GR YF M + + PQ +HY C+V+LLGRAG EEA E++K M +E D +V
Sbjct: 499 CHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMV 558
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+L C I+ E A KL+++DP++ G ++LAN+Y E GKW+E + +RKM+ +
Sbjct: 559 WGALFFACGIHRNLLIGERAASKLLDLDPHDSGIYVLLANMYREAGKWEEAQNIRKMMME 618
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
R KTPG S IEV+ +++F DK+HP++E+IY+
Sbjct: 619 RGVEKTPGSSSIEVNGIINEFIVRDKSHPQSEQIYECF 656
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 234/507 (46%), Gaps = 72/507 (14%)
Query: 11 TLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIF 69
L+ +L++LE C + LKQ+Q+ + G F + +L+ FC + S NL Y I
Sbjct: 51 VLSNPLLSLLENCKSFSQLKQIQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKIL 110
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
++L PN + + A+I + + LY+ M+ R +P+ + Y + K C +++
Sbjct: 111 NNLQNPNVFSWNAVIRG-CVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVL 169
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
S + Q++K GF++ + +++ G G+A K+FDE R++VSW ++I+
Sbjct: 170 SYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGES-GLAHKVFDEGCVRDLVSWNSLIN 228
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GY R + A ++ M ++++++P+
Sbjct: 229 GYVRRRQPREAMGIYQQM----------------------------------ITEHVKPD 254
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+VT++ +SA L+LG+ IH Y+ +GL+L + NAL+DMY KCG L+ + FD
Sbjct: 255 EVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFD 314
Query: 310 RNSKKRLTSWNSMINSFA-----------LHGQSENSICVFEEMM--------------- 343
KK + SW +MI +A H E ++ + M+
Sbjct: 315 NMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALEL 374
Query: 344 --RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG 401
Q N++PD VT + L+AC+ G ++ G + K + + + L+D+
Sbjct: 375 FREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYI-KKHNLSLDVALGTALIDMYA 433
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGY- 458
+ G +AL+V M + + W +++ G +YG + A F K+I+ + P+ +
Sbjct: 434 KCGNMTKALQVFNEMP-RRNSLTWTAIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFL 492
Query: 459 GIMLANIYGELGKWDEVRKVRKMLKDR 485
G++ A +G G +E RK +K R
Sbjct: 493 GVLTACCHG--GLVEEGRKYFDQMKSR 517
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 300/522 (57%), Gaps = 14/522 (2%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT-LKLSNLTYARFI 68
+ L +++ L+ C ++N +KQ+ + G Q+ + KL+R T L + Y R +
Sbjct: 47 ELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRV 106
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
+ + N +L+TA+I Y + A ++Y M R+ + P F + +LK+C +
Sbjct: 107 IEPVQFRNPFLWTAVIRGYTIE-GKFDEAIAMYGCM-RKEEITPVSFTFSALLKACGSMG 164
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ + H Q + + V +++ Y + G+ I ARK+FDEM +R+V+SWT +I
Sbjct: 165 DLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCGS-IVCARKVFDEMPERDVISWTELI 223
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
+ Y RVG++++AA LF+S+P +D+ AW +++ G QN +A+ +F RM IR
Sbjct: 224 AAYARVGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRME---KSGIRA 280
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS--FISNALIDMYGKCGSLKEARR 306
++VT+ +SA G + ++G I +ALIDMY KCG+++EA
Sbjct: 281 DEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVN 340
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F + K + S++SMI A HG+++ ++ +F M+ I+P+ VTF+ L AC+H
Sbjct: 341 VFVSMNNKNVFSYSSMILGLATHGRAQEALDLFHYMV--TQTAIKPNTVTFVGALTACSH 398
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GLV+QGR F M +T+ +EP +HY C+VDLLGRAGR +EALE++K M +EP VWG
Sbjct: 399 SGLVDQGRQVFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWG 458
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+LL C+I+ D AE A + L E++P+ G I+L+N+Y G W V VRK++K++
Sbjct: 459 ALLGACRIHNNPDIAEIAAEHLFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKG 518
Query: 487 AYKTPGCSWIEVDK--QVHQFHSLDKTHPRTEEIYDALESMV 526
KTP SW+ VDK Q+H+F + HP +++I D LE +V
Sbjct: 519 LKKTPAVSWV-VDKNGQMHKFFPGNLNHPMSKKIQDKLEELV 559
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 186/535 (34%), Positives = 293/535 (54%), Gaps = 23/535 (4%)
Query: 2 VSVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN 61
+S + ++ Q + ++L+ C +L ++ + + G SQ N+ L+ + +
Sbjct: 16 ISAIGRSSRVRQQFIFSVLKSCVSFRNLAKIHAQIVVSGFSQKNYILNHLLSL-YISFGS 74
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L A+ +F+ +T P+T ++ +I + ++ + + L++ M G + N F Y +L
Sbjct: 75 LGSAQKVFEDITAPSTTVWNQIIKGH-TRSKTSKKSIELFKRMTLAG-VEANGFTYSFLL 132
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN----DIGIARKLFDEMS 177
+C R + +H +++ +G+ V T L+N Y+ G+ D+ AR LFDEM
Sbjct: 133 SACVRSRLFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMP 192
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF-- 235
D NVV W ++++GY R GD A +FD MP+R+V W ++AG QNG A+S F
Sbjct: 193 DSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQ 252
Query: 236 -RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG----LDLDSFISNA 290
RR G+E+ +QV LV ALSA G L LGK IHGYV R L + ++NA
Sbjct: 253 MRRAGVEL------DQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNA 306
Query: 291 LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
LI MY CG + A + F+ ++ SW+S+I FA G +I +F+ M+ + +
Sbjct: 307 LIHMYASCGVMDLAYKVFEEIPQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEV 366
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
RPD +TFI L AC+H GL+ G F+ M KT+ + PQIEHYGC+VDLL RAG EAL
Sbjct: 367 RPDEITFIGALTACSHAGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEAL 426
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL-IEIDPNN--GGYGIMLANIYG 467
+++ M ++P+ VWG+LL+GC+++ + K L EI PNN GY ++LAN+Y
Sbjct: 427 SLIESMPMKPNNAVWGALLSGCRLHKNDEIVSHVAKHLSFEIHPNNQAAGYFMLLANVYA 486
Query: 468 ELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
G+W + VR+ + D K G SWIE++ + F ++TH IY+ L
Sbjct: 487 ADGRWQDTATVRRNMHDIGVKKPSGRSWIEINGVLCSFMVGEETHKDVNLIYEML 541
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 175/418 (41%), Positives = 252/418 (60%), Gaps = 10/418 (2%)
Query: 111 QPNQFIYPHVLKSCPDV-LES-RGTKMVHTQIVKSGFEQYPV-VETALVNSYSRSGNDIG 167
+PN + +L +C D LE R +H + K G + V V TALV+ YS+ G +
Sbjct: 86 RPNHITFLTLLSACTDFPLEGLRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQ-LD 144
Query: 168 IARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGL 227
+A +FDEM RN VSW MI G R G++ A LFD M +RD +W S+I G + G
Sbjct: 145 LAWLMFDEMHVRNSVSWNTMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGC 204
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
F A+ +FR M + + P+ VT++ L+A + G L LG I+ +V + + I
Sbjct: 205 FEQALEWFREMQLA---GVEPDYVTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKI 261
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
SN+LIDMY +CG ++ AR+ F++ K+ L SWNSMI FAL+G +E ++ F M +
Sbjct: 262 SNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRK--- 318
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE 407
RPDGV+F L AC+H GLV++G +F +M +T +I P+IEHYGCLVDL RAGR E
Sbjct: 319 EGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLE 378
Query: 408 EALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYG 467
+AL V+ M ++P+EVV GSLL C+ +G AE +K L E+DP + ++L+NIY
Sbjct: 379 DALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYA 438
Query: 468 ELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+G+WD KVRK +K +K PG S IE+D +H+F + DKTH T+ IY L+ +
Sbjct: 439 AVGRWDGASKVRKKMKALGIHKKPGFSSIEMDGSIHEFVAGDKTHVETQNIYAMLDHL 496
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 117/265 (44%), Gaps = 36/265 (13%)
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM-- 265
P + +W S IA +NG +A + F RM + +RPN +T + LSA +
Sbjct: 50 PIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIA---GVRPNHITFLTLLSACTDFPLEG 106
Query: 266 LQLGKVIHGYVYRNGLDLDS-FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
L+ G IH YV + GLD ++ + AL+DMY KCG L A FD + SWN+MI+
Sbjct: 107 LRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMID 166
Query: 325 SFALHGQSENSICVFEEM----------------------------MRCQDHNIRPDGVT 356
+G+ +I +F++M Q + PD VT
Sbjct: 167 GCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVT 226
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
IS+L AC + G + G + + K + I+ L+D+ R G A +V + M
Sbjct: 227 IISVLAACANLGALGLGLWINRFVMKQ-DFKDNIKISNSLIDMYSRCGCIRLARQVFEQM 285
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFA 441
+ V W S++ G + G + A
Sbjct: 286 P-KRSLVSWNSMIVGFALNGHAEEA 309
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 6/139 (4%)
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL--VEQG 373
+ SW S S ALH ++ E R Q +RP+ +TF++LL+ACT L + G
Sbjct: 54 IVSWTS---SIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFG 110
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
+ + K + LVD+ + G+ + A + M + + V W ++++GC
Sbjct: 111 GSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVR-NSVSWNTMIDGCM 169
Query: 434 IYGRTDFAEFAVKKLIEID 452
G A ++ E D
Sbjct: 170 RNGEVGEAIVLFDQMSERD 188
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 177/481 (36%), Positives = 269/481 (55%), Gaps = 68/481 (14%)
Query: 107 RGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSG--- 163
R P++ + +L+SC E++ + H QI+K GFE +++T L++ Y++ G
Sbjct: 3 RNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLK 62
Query: 164 ----------------NDIGI-----------ARKLFDEMSDRNVVSWTAMISGYTRVGD 196
N+ I AR LFD M++RN SW +MI+ Y ++GD
Sbjct: 63 CAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGD 122
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAG-C-------------------------------TQ 224
I +A +FD P +DV +WN++I G C Q
Sbjct: 123 INSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQ 182
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
G F AIS F++M S+N++P +VT+V LSA H G L +G+ IHGY+ L +D
Sbjct: 183 CGEFGTAISMFQQMQ---SENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKID 239
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
+ NALIDMY KCG+L+ A F S+K + WNS+I ++G+ E +I F M
Sbjct: 240 VVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVM-- 297
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
+ I+PDGVTF+ +L+ C+H GL+ G+ YF M Y +EP +EHYGC+VDLLGRAG
Sbjct: 298 -EKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAG 356
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLAN 464
+EALE+++ M ++P+ +V GSLL C+I+ T E ++L+E+DP +GG + L+N
Sbjct: 357 YLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSN 416
Query: 465 IYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALES 524
+Y L +WD+V RK++ R +KTPGCS IEV+ VH+F + D +HP+ +I L+
Sbjct: 417 LYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDE 476
Query: 525 M 525
+
Sbjct: 477 I 477
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/469 (35%), Positives = 267/469 (56%), Gaps = 9/469 (1%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
L L+ A +F+ + + +MIT + A A +Y++M + +PN+
Sbjct: 204 LSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKR-GLAIEAIKIYKEM-EAEKVRPNEIT 261
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
++ SC V + K H I + G E + AL++ Y + G ++ AR LFD M
Sbjct: 262 MIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCG-ELLTARVLFDNM 320
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+ + +VSWT M+ GY R G + A + +P++ V WN++I+GC Q +A++ F
Sbjct: 321 AQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFH 380
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M + I P++VT+V LSA G L +G IH Y+ R+ L +D + AL+DMY
Sbjct: 381 EMQIR---TIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYA 437
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG++ A + F+ ++ +W ++I ALHG +++++ F +M+ I PD +T
Sbjct: 438 KCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHI---GIVPDEIT 494
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
F+ +L+AC HGGLVE+GR YF M+ + + P+++HY C+VDLLGRAG EEA E+VK M
Sbjct: 495 FLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNM 554
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
+ D V G+L C++YG E KL+EIDP + G ++LA++Y E W E R
Sbjct: 555 PMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEAR 614
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
RK++ D+ KTPGCS +E++ VH+F D +HP++E IY+ L ++
Sbjct: 615 SARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSEWIYECLVTL 663
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 222/497 (44%), Gaps = 78/497 (15%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARFIFDHLTT 74
+L+ILERC + LKQ+Q+ + + G + F A +LV FC L S L Y I +
Sbjct: 60 LLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKE 119
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
N + + A I Y + F LY+ M+ G +P+ YP +LK C S
Sbjct: 120 LNVFSWNAAIRGYV-ESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGL 178
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
V ++K GFE V A S T ++S
Sbjct: 179 GVLGHVLKFGFECDIFVHNA----------------------------SITMLLS----C 206
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G++ A +F+ RD+ WNS+I GC + GL +AI ++ M E +RPN++T++
Sbjct: 207 GELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAE---KVRPNEITMI 263
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
+S+ L LGK H Y+ +GL+ ++NAL+DMY KCG L AR FD ++K
Sbjct: 264 GMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQK 323
Query: 315 RLTSWNSMINSFALHG-------------------------------QSENSICVFEEMM 343
L SW +M+ +A G Q + ++ +F EM
Sbjct: 324 TLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEM- 382
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
Q I PD VT ++ L+AC+ G ++ G + + +++ + LVD+ +
Sbjct: 383 --QIRTIEPDKVTMVNCLSACSQLGALDVG-IWIHHYIERHKLSIDVALGTALVDMYAKC 439
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID--PNNGGY-GI 460
G AL+V + + + + + W +++ G ++G A K+I I P+ + G+
Sbjct: 440 GNIARALQVFEEIP-QRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGV 498
Query: 461 MLANIYGELGKWDEVRK 477
+ A +G G +E RK
Sbjct: 499 LSACCHG--GLVEEGRK 513
>gi|357487459|ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515352|gb|AES96975.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 525
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 177/522 (33%), Positives = 295/522 (56%), Gaps = 18/522 (3%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL---SNLTYARFIF 69
++ L +LE+C + HLKQ + + T G F +++ FC+ +LTYA +F
Sbjct: 5 TKRCLVLLEKCKSMKHLKQAHAQVFTTGLENNTFALSRVLAFCSSHKHHHESLTYACRVF 64
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
+ + P +Y +I A+ SA ++ M++ + +P+ + P+VLK+C +
Sbjct: 65 EQIQNPTVCIYNTLIKAFLVNNKF-KSALQVFVKMLQ-SELKPDNYTIPYVLKACGTFHD 122
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
KM+H K G V +L+ Y G D+ AR +FDE+ NVVSW+ MIS
Sbjct: 123 CSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFG-DVVAARYVFDEIPSLNVVSWSVMIS 181
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GY +VGD+ +A FD P++D W ++I+G QN F +++ FR M + +I P+
Sbjct: 182 GYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLT---DIVPD 238
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL-DLDSFISNALIDMYGKCGSLKEARRAF 308
+ V LSA H G L++G IH ++ + L L +S +L+DMY KCG+L+ A+R F
Sbjct: 239 ESIFVSILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLF 298
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
D + + + WN+MI+ A+HG + ++ +F +M + ++PD +TFI++ AC++ G
Sbjct: 299 DSMNMRDVVCWNAMISGMAMHGDGKGALKLFYDMEKV---GVKPDDITFIAVFTACSYSG 355
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM----KIEPDEVV 424
+ +G M Y I P+ EHYGCLVDLL RAG FEEA+ +++ + + +
Sbjct: 356 MAYEGLMLLDKMCSVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLA 415
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPN-NGGYGIMLANIYGELGKWDEVRKVRKMLK 483
W + L+ C +G T AE A +K++++D + + G ++L+N+Y GK + R+VR M+K
Sbjct: 416 WRAFLSACCNHGETQLAELAAEKVLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDMMK 475
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ K PGCS +E+D + +F + +KTHP+ EEI+ L+ M
Sbjct: 476 IKGTNKAPGCSSVEIDGVISEFIAGEKTHPQMEEIHSVLKKM 517
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 180/593 (30%), Positives = 299/593 (50%), Gaps = 79/593 (13%)
Query: 3 SVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNL 62
S N Q L+ + ++L++C I LKQ+ + L T + N + +K+ L +
Sbjct: 22 SKPNPNRQALSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIA-----DLKDF 76
Query: 63 TYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
YA F ++ P Y + MI ++ +S A Y M G +PN YP +
Sbjct: 77 AYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGL-KPNNLTYPFLFI 135
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSR--------------------- 161
+C ++L +M H +++ G ++ V +L+ Y+R
Sbjct: 136 ACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVS 195
Query: 162 -------------SGNDIGIARKLFD------------------EMSDRNVVSW------ 184
+G +G+ R++ + E+ D + +W
Sbjct: 196 WNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVV 255
Query: 185 -----------TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
+A+I Y + GD+ +A +FDSM +D WN++I G QNG+ +AI
Sbjct: 256 ENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIK 315
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
F+ M M + P+Q+TL+ LSA G L LGK + Y G D ++ AL+D
Sbjct: 316 LFQDMRMS---STAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVD 372
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
MY KCGSL A R F K SWN+MI++ A HGQ++ ++ +F+ MM + + P+
Sbjct: 373 MYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMN-EGGTVSPN 431
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
+TF+ +L+AC H GLV++GR F +M+ ++ + P+IEHY C+VDL RAG EEA + V
Sbjct: 432 DITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFV 491
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
M +PDEV+ G+LL C+ D +E +K L+E++P+N G ++ + +Y L +WD
Sbjct: 492 MTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWD 551
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+ ++R ++K + KTPGCSWI+++ Q+H+FH+ D H EI+ L+ ++
Sbjct: 552 DSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLLI 604
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 175/465 (37%), Positives = 275/465 (59%), Gaps = 16/465 (3%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +F+ + N + ++IT Y Q A L+ M++ G P++ V+ +C
Sbjct: 946 ARRVFEAMPERNIVSWNSLITCY-EQNGPVGEALVLFVSMMKAGF-VPDEVTLASVMSAC 1003
Query: 125 PDVLESRGTKMVHTQIVKSG-FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
+ R + VH ++VKS F + V+ ALV+ Y++ G AR +FD M+ R+VVS
Sbjct: 1004 AGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRA-ARCVFDRMASRSVVS 1062
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
T++I+GY R ++++A +F M +++V AWN +IA QNG +A+ F R+ E
Sbjct: 1063 ETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRE-- 1120
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL------DLDSFISNALIDMYGK 297
++ P T L+A G+ LQLG+ H +V + G + D F+ N+L+DMY K
Sbjct: 1121 -SVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLK 1179
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
GS+ + + F+R + + SWN+MI A +G++++++ +FE M+ C + PD VT
Sbjct: 1180 TGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERML-CSKES--PDSVTM 1236
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
I +L+AC H GLVE+GR YF+ MT+ + I P +HY C++DLLGRAG +E E++K M
Sbjct: 1237 IGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMS 1296
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+EPD V+W SLL C+++ + E+A KL E+DP N G ++L+N+Y ELGKW +V +
Sbjct: 1297 MEPDAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFR 1356
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
VR +K R K PGCSWIE+ ++V F + D HP EI+ L
Sbjct: 1357 VRSSMKHRGVSKQPGCSWIEIGRKVSVFLARDNGHPCKNEIHAIL 1401
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 184/389 (47%), Gaps = 40/389 (10%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ +F+ + N + AM+T Y + + A L++ M R+ + + VL +C
Sbjct: 337 AKRVFEGMKERNLVSWNAMLTGYI-RSMDLTGALLLFQQM-RQETREFDAITLGSVLSAC 394
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+L+ + VH +K GF P+++ ALV YS+ G R L EM
Sbjct: 395 TGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGS------ 448
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+RD +WNS+I+G ++ + A+ +M EV+
Sbjct: 449 ------------------------ERDSYSWNSLISGYERHSMSEAALYALTKMQSEVT- 483
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
PNQ T AL+A + +L+ G IH Y+ R G ++D + + LIDMY KC +
Sbjct: 484 ---PNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYS 540
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R F+ + + WNSMI A G+ E + +F+EM Q I+ D VTF+ L +C
Sbjct: 541 IRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEM---QKQGIKADSVTFLGALVSC 597
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
G V GR+YF LM I P+IEHY C+++LLG+ G E + V+ M EP +
Sbjct: 598 ISEGHVRLGRSYFTLMMDE-SIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAM 656
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDP 453
W + + C+ YG E A K + + +P
Sbjct: 657 WLRIFDCCREYGNRKLGERAAKCINDSNP 685
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 195/387 (50%), Gaps = 26/387 (6%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRR---GQPQPNQFIYP 118
L AR FD + PN + ++ Y H + + DM R +P +
Sbjct: 202 LADARRAFDDILEPNAISWNVIVRRY-----HLAGMGDMAVDMFFRMLSAGVRPLGYTVS 256
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
H + +C D + +H +++ G+E + V +++V+ Y++ G + A+ LF+
Sbjct: 257 HAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGA-MDAAQSLFNLAPM 315
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
+++V T+++SG G I +A +F+ M +R++ +WN+++ G ++ + A+ F++M
Sbjct: 316 KDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQM 375
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK--VIHGYVYRNGLDLDSFISNALIDMYG 296
E + + +TL LSA TG+L +GK +H + + G + NAL+ MY
Sbjct: 376 RQETREF---DAITLGSVLSAC--TGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYS 430
Query: 297 KCGSLKEARR--AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
KCG L+ A R F+ S++ SWNS+I+ + H SE ++ +M + P+
Sbjct: 431 KCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKM----QSEVTPNQ 486
Query: 355 VTFISLLNACTHGGLVEQG-RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
TF S L AC + L++QG + + ++ K Y I+ + L+D+ + +F+ ++ +
Sbjct: 487 STFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILR--SVLIDMYCKCRQFDYSIRIF 544
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+ + D ++W S++ GC G+ ++
Sbjct: 545 EA-RPSRDVILWNSMIFGCAYSGKGEY 570
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 171/350 (48%), Gaps = 11/350 (3%)
Query: 141 VKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
+KS F + LV++Y+R G + AR++FDE+ N S+ A++S + R+G +A
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGR-LPDARRVFDEIPHPNTFSYNALLSAHARLGRPADA 845
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
+LF ++PD D ++N+VIA Q+ +DA+ F M +D+ N + ALSA
Sbjct: 846 RALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMH---ADDFVLNAYSFASALSAC 902
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
+ G +H V ++ D +I +AL+DMY KC +EARR F+ ++ + SWN
Sbjct: 903 AAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWN 962
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
S+I + +G ++ +F MM+ PD VT S+++AC +GR +
Sbjct: 963 SLITCYEQNGPVGEALVLFVSMMKA---GFVPDEVTLASVMSACAGLAADREGRQVHARV 1019
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
K+ R + LVD+ + GR A V M V SL+ G +
Sbjct: 1020 VKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMA-SRSVVSETSLITGYARSANVED 1078
Query: 441 AEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
A+ +++E N + +++A Y + G+ +E ++ LK + + T
Sbjct: 1079 AQMVFSQMVE--KNVIAWNVLIA-AYAQNGEEEEALRLFVRLKRESVWPT 1125
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 196/458 (42%), Gaps = 105/458 (22%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVR--------- 106
+L L AR +FD + PNT+ Y A+++A+A +PA A + F D +
Sbjct: 807 RLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAA 866
Query: 107 -----RGQPQ-------------PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQY 148
RG N + + L +C +SR VH + KS +
Sbjct: 867 LAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKD 926
Query: 149 PVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP 208
+ +AL++ Y++ AR++F+ M +RN+VSW ++I+ Y + G + A LF SM
Sbjct: 927 VYIGSALLDMYAKC-EWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSM- 984
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
+ P++VTL +SA +
Sbjct: 985 ---------------------------------MKAGFVPDEVTLASVMSACAGLAADRE 1011
Query: 269 GKVIHGYVYRNG-LDLDSFISNALIDMYGKCGSLKEARRAFDRNS--------------- 312
G+ +H V ++ D +SNAL+DMY KCG + AR FDR +
Sbjct: 1012 GRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYA 1071
Query: 313 ----------------KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
+K + +WN +I ++A +G+ E ++ +F +R + ++ P T
Sbjct: 1072 RSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLF---VRLKRESVWPTHYT 1128
Query: 357 FISLLNACTHGGLVEQG-RAYFKLMTKTYRIE--PQIEHY--GCLVDLLGRAGRFEEALE 411
+ ++LNAC + ++ G +A+ ++ + +R + P+ + + LVD+ + G ++ +
Sbjct: 1129 YGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAK 1188
Query: 412 VVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
V + M D V W +++ G GR A ++++
Sbjct: 1189 VFERMAAR-DNVSWNAMIVGHAQNGRAKDALHLFERML 1225
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 186/435 (42%), Gaps = 80/435 (18%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + + A+ITA +S+ H S A SL+ +M G +P VL C
Sbjct: 104 ARELFDLMPLRDGGSWNAIITA-SSRAGHPSEALSLFSNMNSLGI-RPKDATMASVLSCC 161
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGND--IGIARKLFDEMSDRNVV 182
+ L+ G + +H I K F+ ++ TALV+ Y GN + AR+ FD++ + N +
Sbjct: 162 AECLDLCGARQLHGHIAKRDFQSNVILGTALVDVY---GNCFLLADARRAFDDILEPNAI 218
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
S WN ++ G+ A+ F RM +
Sbjct: 219 S-------------------------------WNVIVRRYHLAGMGDMAVDMFFRM---L 244
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL- 301
S +RP T+ A+ A L+ G+ IH +V R+G + + ++++DMY KCG++
Sbjct: 245 SAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMD 304
Query: 302 ------------------------------KEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
+A+R F+ ++ L SWN+M+ +
Sbjct: 305 AAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMD 364
Query: 332 SENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT-YRIEPQI 390
++ +F++M + D +T S+L+ACT + +G K + P +
Sbjct: 365 LTGALLLFQQM---RQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPIL 421
Query: 391 EHYGCLVDLLGRAGRFEEALEVVK-GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL- 448
++ LV + + G A ++ M E D W SL++G + + ++ A +A+ K+
Sbjct: 422 KN--ALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQ 479
Query: 449 IEIDPNNGGYGIMLA 463
E+ PN + LA
Sbjct: 480 SEVTPNQSTFSSALA 494
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 117/250 (46%), Gaps = 8/250 (3%)
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I G + +A LFD MP RD +WN++I ++ G S+A+S F M S IR
Sbjct: 92 IESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMN---SLGIR 148
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P T+ LS L + +HG++ + + + AL+D+YG C L +ARRA
Sbjct: 149 PKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRA 208
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FD + SWN ++ + L G + ++ +F M+ +RP G T + AC
Sbjct: 209 FDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSA---GVRPLGYTVSHAVLACRDN 265
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
+E+GR + + + E + +VD+ + G + A + ++ D V+ S
Sbjct: 266 NALEEGRCIHAFVLR-HGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMK-DMVMSTS 323
Query: 428 LLNGCKIYGR 437
+++G GR
Sbjct: 324 IVSGLASCGR 333
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
+F+ N I+ CGS+ +AR FD + SWN++I + + G ++ +F M
Sbjct: 85 TFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNM-- 142
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
IRP T S+L+ C + R + K + + LVD+ G
Sbjct: 143 -NSLGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKR-DFQSNVILGTALVDVYGNCF 200
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+A + +EP+ + W ++ + G D A
Sbjct: 201 LLADARRAFDDI-LEPNAISWNVIVRRYHLAGMGDMA 236
>gi|357494311|ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 292/518 (56%), Gaps = 19/518 (3%)
Query: 13 NQQVLAILE-RCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
N L +L+ C INH Q+ + G + + + + FC N+ YA +F
Sbjct: 27 NHPCLTMLQNHCTTINHFHQIYPHIIKTGLTLNPIASTRALTFCASPSGNINYAYKLFVR 86
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ PN Y + +I A+ S+ + A SL+ DM+ Q QP YP V K+ + +
Sbjct: 87 MPNPNLYSWNTIIRAF-SRSSTPQFAISLFVDMLY-SQIQPQYLTYPSVFKAYAQLGHAH 144
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD----EMSDRNVVSWTAM 187
+H ++VK G + + ++ Y+ +G + AR++FD E+ D +VV+ +M
Sbjct: 145 YGAQLHGRVVKLGLQNDQFICNTIIYMYA-NGGLMSEARRVFDGKKLELYDHDVVAINSM 203
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM---GMEVSD 244
I GY + G+I + +LFD M R +WNS+I+G +NG +A+ F +M G EVS+
Sbjct: 204 IMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSE 263
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
T+V L+A H G LQ GK +H Y+ RN +L+ + A+IDMY KCGS++ A
Sbjct: 264 ------FTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENA 317
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F+ ++ L+ WNS+I A++G + F ++ + ++PD V+FI +L AC
Sbjct: 318 VEVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKL--LKPDSVSFIGVLTAC 375
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
H G + + R YF+LM Y IEP I+HY C+VD+LG+AG EEA E++KGM ++PD ++
Sbjct: 376 KHLGAINKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAII 435
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WGSLL+ C+ + A A +++ E++P++ ++++N++ K++E + R ++K+
Sbjct: 436 WGSLLSSCRKHRNVQIARRAAQRVYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKE 495
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
K PGCS IE+ +VH+F + + HP+T+EIY L
Sbjct: 496 NLTEKEPGCSSIELYGEVHEFIAGGRLHPKTQEIYHLL 533
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 186/535 (34%), Positives = 293/535 (54%), Gaps = 23/535 (4%)
Query: 2 VSVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN 61
+S + ++ Q + ++L+ C +L + + + G SQ N+ L+ + +
Sbjct: 16 ISAIGRSSRVRQQFIFSVLKSCVSFRNLAKTHAQIVVSGFSQKNYILNHLLSL-YISFGS 74
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L A+ +F+ +T P+T ++ +I + ++ + + L++ M G + N F Y +L
Sbjct: 75 LGSAQKVFEDITAPSTTVWNQIIKGH-TRSKTSKKSIELFKRMTLAG-VEANGFTYSFLL 132
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN----DIGIARKLFDEMS 177
+C R + +H +++ +G+ V T L+N Y+ G+ D+ A LFDEM
Sbjct: 133 SACVRSRLFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRALYLFDEMP 192
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF-- 235
D NVV W ++++GY R GD A +FD MP+R+V W ++AG QNG A+S F
Sbjct: 193 DSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQ 252
Query: 236 -RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG----LDLDSFISNA 290
RR G+E+ +QV LV ALSA G L LGK IHGYV R L + ++NA
Sbjct: 253 MRRAGVEL------DQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNA 306
Query: 291 LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
LI MY CG++ A + F+ ++ SW+S+I FA G +I +F+ M+ + +
Sbjct: 307 LIHMYASCGAMDLAYKLFEEIPQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEV 366
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
RPD +TFI L AC+H GL+ G F+ M KT+ + PQIEHYGC+VDLL RAG EAL
Sbjct: 367 RPDEITFIGALTACSHAGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEAL 426
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL-IEIDPNN--GGYGIMLANIYG 467
+++ M ++P+ VWG+LL+GC+++ + K L EIDPNN GY ++LAN+Y
Sbjct: 427 SLIESMPMKPNNAVWGALLSGCRLHKNDEIVSHVAKHLSFEIDPNNQAAGYFMLLANVYA 486
Query: 468 ELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
G+W + VR+ + D K G SWIE++ + F ++TH IY+ L
Sbjct: 487 ADGRWQDTATVRRNMHDIGVKKPSGRSWIEINGVLCSFMVGEETHKDVNLIYEML 541
>gi|414873430|tpg|DAA51987.1| TPA: hypothetical protein ZEAMMB73_709752 [Zea mays]
Length = 536
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 176/473 (37%), Positives = 275/473 (58%), Gaps = 15/473 (3%)
Query: 64 YARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP----- 118
+AR +FD + P TAM A+A+ A+ A +++RDM+ G N +
Sbjct: 65 HARDLFDEMPDPGLVSRTAMARAHAAS-GQAAQALAVFRDMIADGVLPDNVALAVALAAC 123
Query: 119 HVLKSCPDV---LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
H S P R KMVH IV SG V T L+ Y G ++ ++R+LFD
Sbjct: 124 HTTASLPAAGMAAARRPGKMVHAIIVTSGIVPDVFVSTELIRVYGEYG-ELALSRRLFDA 182
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
M R+ VSW AM+ Y R ++ +A LF +MP RDV +WN++IAG + G F +A+
Sbjct: 183 MPVRSTVSWNAMVHQYIRHSNVGDAYELFLAMPRRDVVSWNTMIAGYSLVGRFMEALELS 242
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
R+M S + PN T+ L+A G L+ G +H +V RN ++ D + +LIDMY
Sbjct: 243 RQMISPSSCPVYPNGPTMSTVLAACAGAGCLETGIWVHAFVDRNRMNDDGSLDRSLIDMY 302
Query: 296 GKCGSLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
KCGS+++A + F++ + R L SW +MI A+HG++ +++ +F M QD+ I PD
Sbjct: 303 VKCGSIEKALQVFEKAPEARDLYSWTTMICGLAMHGRAADALKMFGMM---QDNGIHPDD 359
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
VT + +LNAC H GLV++G +F + K Y I P+IEHYGC++DLLGR GR +EA +++
Sbjct: 360 VTLVGVLNACAHCGLVDEGLRHFYSLEK-YAITPKIEHYGCVIDLLGRVGRLQEAYNIIR 418
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M+++P+ V+WG+ LN CK++ + E A +L +DP + +ML+++Y +L W+
Sbjct: 419 TMRMKPNAVIWGAFLNACKVHSNVELGEIAAAELTRLDPGDPWAKVMLSSLYAKLQDWNS 478
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+ + R+ + + KTPGCS IE+D +VH+F + HP+ EI LE++ A
Sbjct: 479 LARERREMNNLQIKKTPGCSSIELDGEVHEFVAGGFQHPQHGEICTVLENVEA 531
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 132/294 (44%), Gaps = 44/294 (14%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
TA++S Y +G ++A LFD MPD + + ++ +G + A++ FR M ++D
Sbjct: 51 TALLSAYAALGRPRHARDLFDEMPDPGLVSRTAMARAHAASGQAAQALAVFRDM---IAD 107
Query: 245 NIRPNQVTL---------VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
+ P+ V L +L A G + GK++H + +G+ D F+S LI +Y
Sbjct: 108 GVLPDNVALAVALAACHTTASLPAAGMAAARRPGKMVHAIIVTSGIVPDVFVSTELIRVY 167
Query: 296 GKCGSLKEARRAFD------------------RNS-------------KKRLTSWNSMIN 324
G+ G L +RR FD R+S ++ + SWN+MI
Sbjct: 168 GEYGELALSRRLFDAMPVRSTVSWNAMVHQYIRHSNVGDAYELFLAMPRRDVVSWNTMIA 227
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
++L G+ ++ + +M+ + P+G T ++L AC G +E G +
Sbjct: 228 GYSLVGRFMEALELSRQMISPSSCPVYPNGPTMSTVLAACAGAGCLETG-IWVHAFVDRN 286
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
R+ L+D+ + G E+AL+V + D W +++ G ++GR
Sbjct: 287 RMNDDGSLDRSLIDMYVKCGSIEKALQVFEKAPEARDLYSWTTMICGLAMHGRA 340
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 35/178 (19%)
Query: 272 IHGYVYRNGL-DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG 330
IHG +++ GL + + AL+ Y G + AR FD L S +M + A G
Sbjct: 33 IHGLLFKEGLLHAGAHLPTALLSAYAALGRPRHARDLFDEMPDPGLVSRTAMARAHAASG 92
Query: 331 QSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC-THGGLVEQGRAYFKLMTKTYRIEPQ 389
Q+ ++ VF +M+ + PD V L AC T L G A +
Sbjct: 93 QAAQALAVFRDMIA---DGVLPDNVALAVALAACHTTASLPAAGMAAAR----------- 138
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKK 447
R G+ A+ V G I PD V L+ ++YG ++ E A+ +
Sbjct: 139 ------------RPGKMVHAIIVTSG--IVPDVFVSTELI---RVYG--EYGELALSR 177
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 261/426 (61%), Gaps = 8/426 (1%)
Query: 101 YRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYS 160
+ DMVR G P Y VL +C VH +V SG V AL++ Y+
Sbjct: 111 FVDMVRTGV-VPTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYA 169
Query: 161 RSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIA 220
+++ A +LF+ M RN VSWT++ISG+ R+G + A +LFD MP+RD +W ++I
Sbjct: 170 EC-SEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMID 228
Query: 221 GCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG 280
G Q G F +A+ FR M +R ++ T+V ++A G L+ G+ Y+ R+G
Sbjct: 229 GYVQAGQFREALEMFREMQFS---KVRADEFTMVSVVTACAQLGALETGEWARIYMSRHG 285
Query: 281 LDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFE 340
+ +D+F+ NAL+DMY KCGS+++A F + +W ++I A++G E +I +F
Sbjct: 286 IKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFY 345
Query: 341 EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL 400
M+R + PD VTFI +L ACTH GLV++GR +F MT +Y I P + H+GCL+DLL
Sbjct: 346 RMLRVFEA---PDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLL 402
Query: 401 GRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI 460
GRAG+ +EALE + M + P+ +WG+LL C+++G ++ + A + L+E+D NG I
Sbjct: 403 GRAGKLKEALETIGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLELDTENGMVYI 462
Query: 461 MLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYD 520
+L+N+Y + +W++VR++R+++ ++ K PGCS IE++ +H+F + D++HP ++EIY
Sbjct: 463 LLSNLYAKSNRWEDVRRLRQVIMEKGIKKEPGCSLIEMNGTIHEFIAGDRSHPMSKEIYS 522
Query: 521 ALESMV 526
L+ ++
Sbjct: 523 KLDKVL 528
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 159/375 (42%), Gaps = 72/375 (19%)
Query: 100 LYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT--KMVHTQIVKSGFEQYPVVETALVN 157
+Y M+ RG +P+ + +P +LK+ E RG VH +VK G E V ++LV
Sbjct: 5 VYVGMLARG-ARPDAYTFPPLLKAVTAAAE-RGAVGDAVHAHVVKFGMELNAHVASSLVL 62
Query: 158 SYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNS 217
Y+ G D +AR L D +W A R GD WN+
Sbjct: 63 MYAARG-DGAVARTLLD--------AWPA------RGGDTP--------------VVWNA 93
Query: 218 VIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVY 277
+I+G ++ F + F M V + P VT + LSA G + LG +H V
Sbjct: 94 LISGHRRSRQFRLSCCSFVDM---VRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVV 150
Query: 278 RNGLDLDSFISNALIDMYGKC-------------------------------GSLKEARR 306
+G+ D + NALIDMY +C G + +AR
Sbjct: 151 ASGVLPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQART 210
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
FD ++ SW +MI+ + GQ ++ +F EM Q +R D T +S++ AC
Sbjct: 211 LFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREM---QFSKVRADEFTMVSVVTACAQ 267
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
G +E G + ++ + I+ LVD+ + G ++AL V K M I D+ W
Sbjct: 268 LGALETGE-WARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIR-DKFTWT 325
Query: 427 SLLNGCKIYGRTDFA 441
+++ G + G + A
Sbjct: 326 AVILGLAVNGHGEEA 340
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 147/355 (41%), Gaps = 52/355 (14%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
L+L + AR +FD + +T +TAMI Y Q A ++R+M + + + ++F
Sbjct: 200 LRLGQVDQARTLFDCMPERDTVSWTAMIDGYV-QAGQFREALEMFREM-QFSKVRADEFT 257
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
V+ +C + + + + G + V ALV+ YS+ G+ I A +F EM
Sbjct: 258 MVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGS-IQQALGVFKEM 316
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
R+ +WTA VI G NG +AI+ F
Sbjct: 317 YIRDKFTWTA-------------------------------VILGLAVNGHGEEAINMFY 345
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK-VIHGYVYRNGLDLDSFISNALIDMY 295
RM + V + P++VT + L+A H G++ G+ G+ + LID+
Sbjct: 346 RM-LRVFEA--PDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLL 402
Query: 296 GKCGSLKEARRAFDRNSKKRLTS--WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
G+ G LKEA N R S W +++ + +HG SE E ++ N
Sbjct: 403 GRAGKLKEALETIG-NMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLELDTEN---- 457
Query: 354 GVTFISLLNACTHGGLVEQGRAYFK-LMTKTYRIEPQIEHYGC-LVDLLGRAGRF 406
G+ +I L N E R + +M K + EP GC L+++ G F
Sbjct: 458 GMVYILLSNLYAKSNRWEDVRRLRQVIMEKGIKKEP-----GCSLIEMNGTIHEF 507
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 165/464 (35%), Positives = 265/464 (57%), Gaps = 11/464 (2%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L + A +F+ + + + AMI Y +Q + A L+ M+ P++F
Sbjct: 243 LGRMDLAESLFESMPGRSIVSWNAMIAGY-NQNGLDAKALKLFSRMLHESSMAPDEFTIT 301
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM-- 176
VL +C ++ R K VH I+++ V AL+++Y++SG+ + AR++ D+
Sbjct: 302 SVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGS-VENARRIMDQSME 360
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+D NV+S+TA++ GY ++GD+++A +F M +RDV AW ++I G QNG +AI FR
Sbjct: 361 TDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFR 420
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M ++ PN TL LS L GK IH R+ L+ S +SNA+I MY
Sbjct: 421 SM---ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYA 477
Query: 297 KCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
+ GS ARR FD+ +K +W SMI + A HGQ E ++ +FEEM+R + PD +
Sbjct: 478 RSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRA---GVEPDRI 534
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
T++ +L+AC+H G V +G+ Y+ + ++I P++ HY C+VDLL RAG F EA E ++
Sbjct: 535 TYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRR 594
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M +EPD + WGSLL+ C+++ + AE A +KL+ IDPNN G +AN+Y G+W +
Sbjct: 595 MPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDA 654
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
++ K K++ K G SW + ++H F + D HP+ + +Y
Sbjct: 655 ARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVY 698
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/476 (24%), Positives = 216/476 (45%), Gaps = 55/476 (11%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYA 88
L+ + + ++ N + + + K L AR +F + + +T M+
Sbjct: 81 LRDARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGL- 139
Query: 89 SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQY 148
++ A DM G P QF +VL SC + VH+ +VK G
Sbjct: 140 NRAGRFGEAIKTLLDMTADGF-TPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSC 198
Query: 149 PVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP 208
V +++N Y + G D A +F+ M R+V SW AM+S T +G + A SLF+SMP
Sbjct: 199 VPVANSVLNMYGKCG-DAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMP 257
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
R + +WN++IAG QNGL + A+ F RM E S + P++ T+ LSA + G +++
Sbjct: 258 GRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESS--MAPDEFTITSVLSACANLGNVRI 315
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN----------------- 311
GK +H Y+ R + +S ++NALI Y K GS++ ARR D++
Sbjct: 316 GKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGY 375
Query: 312 ----------------SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
+ + + +W +MI + +G+++ +I +F M+ C P+
Sbjct: 376 VKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPE---PNSY 432
Query: 356 TFISLLNACTHGGLVEQG-----RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
T ++L+ C ++ G RA L+ ++ + I + + R+G F A
Sbjct: 433 TLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAI------ITMYARSGSFPWAR 486
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGY-GIMLA 463
+ + + + W S++ +G+ + A ++++ ++P+ Y G++ A
Sbjct: 487 RMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSA 542
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 187/439 (42%), Gaps = 76/439 (17%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIG---IARKLF 173
Y +L+ C + +H + VK+G + L++ Y + G AR+LF
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 174 DE--MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
DE ++ RNV +W +++S + + G + +A +F MP+RD +W ++ G + G F +A
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
I M +D P Q TL LS+ T +G+ +H +V + GL ++N++
Sbjct: 149 IKTLLDM---TADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSV 205
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM--------- 342
++MYGKCG + A F+R + ++SWN+M++ G+ + + +FE M
Sbjct: 206 LNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWN 265
Query: 343 --------------------MRCQDHNIRPDGVTFISLLNACTHGGLVEQGR---AYF-- 377
+ ++ PD T S+L+AC + G V G+ AY
Sbjct: 266 AMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILR 325
Query: 378 ---------------------------KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
++M ++ + + + L++ + G E A
Sbjct: 326 TEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAR 385
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI-MLANIYGEL 469
E+ G+ D V W +++ G + GR D A + +I P Y + + ++ L
Sbjct: 386 EMF-GVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASL 444
Query: 470 -----GKWDEVRKVRKMLK 483
GK R +R +L+
Sbjct: 445 ACLDYGKQIHCRAIRSLLE 463
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 188/548 (34%), Positives = 285/548 (52%), Gaps = 77/548 (14%)
Query: 47 YAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVR 106
Y ++ C+ S+ Y RF+F + PN +L+ MI S A Y ++R
Sbjct: 47 YLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCF-DDAIEFY-GLMR 104
Query: 107 RGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG---------------------- 144
PN F +P VLK+C +L+ + +HT +VK G
Sbjct: 105 SEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLE 164
Query: 145 -----FEQYP----VVETALVNSYSRSGN---DIGIARKLFD------------------ 174
F+ P V TA+++ Y G I + R+L +
Sbjct: 165 DAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACT 224
Query: 175 EMSD-----------------RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNS 217
++ D RNV T+++ Y + G+++ A S+FD MP++D+ +W +
Sbjct: 225 QLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGA 284
Query: 218 VIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVY 277
+I G NGL +AI F +M E N++P+ T+V LSA G L+LG+ + G V
Sbjct: 285 MIQGYALNGLPKEAIDLFLQMQRE---NVKPDCYTVVGVLSACARLGALELGEWVSGLVD 341
Query: 278 RNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSIC 337
RN + + ALID+Y KCGS+ A F +K WN++I+ A++G + S
Sbjct: 342 RNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFG 401
Query: 338 VFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLV 397
+F ++ + I+PDG TFI LL CTH GLV++GR YF M + + + P IEHYGC+V
Sbjct: 402 LFGQV---EKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMV 458
Query: 398 DLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGG 457
DLLGRAG +EA ++++ M +E + +VWG+LL C+I+ T AE A+K+LIE++P N G
Sbjct: 459 DLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSG 518
Query: 458 YGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEE 517
++L+NIY KWDE KVR + ++ K PGCSWIEVD VH+F DK HP +E+
Sbjct: 519 NYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEK 578
Query: 518 IYDALESM 525
IY L+ +
Sbjct: 579 IYAKLDEL 586
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 134/312 (42%), Gaps = 17/312 (5%)
Query: 15 QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
+VL+ + +N + + + +G + F LV K N+ AR +FD +
Sbjct: 218 RVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYA-KCGNMEKARSVFDGMPE 276
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
+ + AMI YA A L+ M +R +P+ + VL +C + +
Sbjct: 277 KDIVSWGAMIQGYALN-GLPKEAIDLFLQM-QRENVKPDCYTVVGVLSACARLGALELGE 334
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
V + ++ F PV+ TAL++ Y++ G+ + A ++F M +++ V W A+ISG
Sbjct: 335 WVSGLVDRNEFLYNPVLGTALIDLYAKCGS-MSRAWEVFKGMKEKDRVVWNAIISGLAMN 393
Query: 195 GDIKNAASLFDSMPDRDV-PAWNSVIA---GCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
G +K + LF + + P N+ I GCT GL + +F M S + P+
Sbjct: 394 GYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFS--LTPSI 451
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA-FD 309
C + +G G+L H + ++ ++ + AL+ G C ++ + A
Sbjct: 452 EHYGCMVDLLGRAGLLDEA---HQLIRNMPMEANAIVWGALL---GACRIHRDTQLAELA 505
Query: 310 RNSKKRLTSWNS 321
L WNS
Sbjct: 506 LKQLIELEPWNS 517
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 166/462 (35%), Positives = 271/462 (58%), Gaps = 40/462 (8%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR + D + N +TAMI+ Y SQ +AS A L+ +M+ G PN+F + VL SC
Sbjct: 64 ARRVLDEMPERNVVSWTAMISGY-SQRGYASEALHLFVEMLMSGT-APNEFTFATVLTSC 121
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ + +H+ ++K+ FE + V ++L++ Y+++G I AR++FD + +R+VVS
Sbjct: 122 TSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGK-ICEARRVFDGLPERDVVSC 180
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
TA+ISGY Q GL +A+ FRR+ E
Sbjct: 181 TAIISGY-------------------------------AQLGLDEEALDLFRRLQRE--- 206
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+R N VT L+A+ L G+ +H +V R L + N+LIDMY KCGSL +
Sbjct: 207 GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYS 266
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
RR FD ++ + SWN+M+ ++ HG ++ +F+ M +++ ++PD VTF+++L+ C
Sbjct: 267 RRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMK--EENKVKPDSVTFLAVLSGC 324
Query: 365 THGGLVEQG-RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
+HGG+ ++G +++++ + EP+IEHYGC+VDL GRAGR EEA E +K M EP
Sbjct: 325 SHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAA 384
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+WGSLL C+++ EF ++L+EI+ N G ++L+N+Y G+WD+VR VR+++K
Sbjct: 385 IWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMK 444
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
++ K PG SWIE+D+ +H FH+ D++HPR EE++ + +
Sbjct: 445 EKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVREL 486
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 125/272 (45%), Gaps = 26/272 (9%)
Query: 1 MVSVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS 60
+ S T+ L +Q+ +++ + + +H+ +G S + YA K
Sbjct: 118 LTSCTSSSGFQLGRQIHSLVIKTSFESHI--------FVGSSLLDMYA---------KAG 160
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
+ AR +FD L + TA+I+ YA Q A L+R + R G + N Y V
Sbjct: 161 KICEARRVFDGLPERDVVSCTAIISGYA-QLGLDEEALDLFRRLQREGM-RSNYVTYASV 218
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
L + + + VH+ ++++ Y V++ +L++ YS+ G+ + +R++FD M +R
Sbjct: 219 LTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGS-LTYSRRIFDSMPERT 277
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDR-----DVPAWNSVIAGCTQNGLFSDAISFF 235
V+SW AM+ GY++ G + A LF M + D + +V++GC+ G+ + F
Sbjct: 278 VISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIF 337
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
M + D P C + G G ++
Sbjct: 338 YEM-VNQKDGFEPEIEHYGCVVDLFGRAGRVE 368
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 165/464 (35%), Positives = 265/464 (57%), Gaps = 11/464 (2%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L + A +F+ + + + AMI Y +Q + A L+ M+ P++F
Sbjct: 137 LGRMDLAESLFESMPDRSIVSWNAMIAGY-NQNGLDAKALKLFSRMLHESSMAPDEFTIT 195
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM-- 176
VL +C ++ R K VH I+++ V AL+++Y++SG+ + AR++ D+
Sbjct: 196 SVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGS-VENARRIMDQSME 254
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+D NV+S+TA++ GY ++GD+++A +F M +RDV AW ++I G QNG +AI FR
Sbjct: 255 TDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFR 314
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M ++ PN TL LS L GK IH R+ L+ S +SNA+I MY
Sbjct: 315 SM---ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYA 371
Query: 297 KCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
+ GS ARR FD+ +K +W SMI + A HGQ E ++ +FEEM+R + PD +
Sbjct: 372 RSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRA---GVEPDRI 428
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
T++ +L+AC+H G V +G+ Y+ + ++I P++ HY C+VDLL RAG F EA E ++
Sbjct: 429 TYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRR 488
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M +EPD + WGSLL+ C+++ + AE A +KL+ IDPNN G +AN+Y G+W +
Sbjct: 489 MPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDA 548
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
++ K K++ K G SW + ++H F + D HP+ + +Y
Sbjct: 549 ARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVY 592
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 207/447 (46%), Gaps = 55/447 (12%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L AR +F + + +T M+ ++ A DM G P QF
Sbjct: 4 KSGRLADARGVFAEMPERDAVSWTVMVVGL-NRAGRFGEAIKTLLDMTADGF-TPTQFTL 61
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+VL SC + VH+ +VK G V +++N Y + G D A +F+ M
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCG-DSETATTVFERMP 120
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
R+V SW AM+S T +G + A SLF+SMPDR + +WN++IAG QNGL + A+ F R
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M E S + P++ T+ LSA + G +++GK +H Y+ R + +S ++NALI Y K
Sbjct: 181 MLHESS--MAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAK 238
Query: 298 CGSLKEARRAFDRN---------------------------------SKKRLTSWNSMIN 324
GS++ ARR D++ + + + +W +MI
Sbjct: 239 SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIV 298
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG-----RAYFKL 379
+ +G+++ +I +F M+ C P+ T ++L+ C ++ G RA L
Sbjct: 299 GYEQNGRNDEAIDLFRSMITCGPE---PNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL 355
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
+ ++ + I + + R+G F A + + + + W S++ +G+ +
Sbjct: 356 LEQSSSVSNAI------ITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 409
Query: 440 FAEFAVKKLIE--IDPNNGGY-GIMLA 463
A ++++ ++P+ Y G++ A
Sbjct: 410 EAVGLFEEMLRAGVEPDRITYVGVLSA 436
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 149/360 (41%), Gaps = 71/360 (19%)
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
+ + G + +A +F MP+RD +W ++ G + G F +AI M +D P Q
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDM---TADGFTPTQ 58
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
TL LS+ T +G+ +H +V + GL ++N++++MYGKCG + A F+R
Sbjct: 59 FTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFER 118
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEM---------------------------- 342
+ ++SWN+M++ G+ + + +FE M
Sbjct: 119 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLF 178
Query: 343 -MRCQDHNIRPDGVTFISLLNACTHGGLVEQGR---AYF--------------------- 377
+ ++ PD T S+L+AC + G V G+ AY
Sbjct: 179 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAK 238
Query: 378 --------KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
++M ++ + + + L++ + G E A E+ G+ D V W +++
Sbjct: 239 SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMF-GVMNNRDVVAWTAMI 297
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI-MLANIYGEL-----GKWDEVRKVRKMLK 483
G + GR D A + +I P Y + + ++ L GK R +R +L+
Sbjct: 298 VGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE 357
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 165/464 (35%), Positives = 265/464 (57%), Gaps = 11/464 (2%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L + A +F+ + + + AMI Y +Q + A L+ M+ P++F
Sbjct: 243 LGRMDLAESLFESMPDRSIVSWNAMIAGY-NQNGLDAKALKLFSRMLHESSMAPDEFTIT 301
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM-- 176
VL +C ++ R K VH I+++ V AL+++Y++SG+ + AR++ D+
Sbjct: 302 SVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGS-VENARRIMDQSME 360
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+D NV+S+TA++ GY ++GD+++A +F M +RDV AW ++I G QNG +AI FR
Sbjct: 361 TDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFR 420
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M ++ PN TL LS L GK IH R+ L+ S +SNA+I MY
Sbjct: 421 SM---ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYA 477
Query: 297 KCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
+ GS ARR FD+ +K +W SMI + A HGQ E ++ +FEEM+R + PD +
Sbjct: 478 RSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRA---GVEPDRI 534
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
T++ +L+AC+H G V +G+ Y+ + ++I P++ HY C+VDLL RAG F EA E ++
Sbjct: 535 TYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRR 594
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M +EPD + WGSLL+ C+++ + AE A +KL+ IDPNN G +AN+Y G+W +
Sbjct: 595 MPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDA 654
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
++ K K++ K G SW + ++H F + D HP+ + +Y
Sbjct: 655 ARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVY 698
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 217/476 (45%), Gaps = 55/476 (11%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYA 88
L+ + + ++ N + + + K L AR +F + + +T M+
Sbjct: 81 LRDARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGL- 139
Query: 89 SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQY 148
++ A DM G P QF +VL SC + VH+ +VK G
Sbjct: 140 NRAGRFGEAIKTLLDMTADGF-TPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSC 198
Query: 149 PVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP 208
V +++N Y + G D A +F+ M R+V SW AM+S T +G + A SLF+SMP
Sbjct: 199 VPVANSVLNMYGKCG-DSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMP 257
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
DR + +WN++IAG QNGL + A+ F RM E S + P++ T+ LSA + G +++
Sbjct: 258 DRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESS--MAPDEFTITSVLSACANLGNVRI 315
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN----------------- 311
GK +H Y+ R + +S ++NALI Y K GS++ ARR D++
Sbjct: 316 GKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGY 375
Query: 312 ----------------SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
+ + + +W +MI + +G+++ +I +F M+ C P+
Sbjct: 376 VKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPE---PNSY 432
Query: 356 TFISLLNACTHGGLVEQG-----RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
T ++L+ C ++ G RA L+ ++ + I + + R+G F A
Sbjct: 433 TLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAI------ITMYARSGSFPWAR 486
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGY-GIMLA 463
+ + + + W S++ +G+ + A ++++ ++P+ Y G++ A
Sbjct: 487 RMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSA 542
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 186/441 (42%), Gaps = 80/441 (18%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIG---IARKLF 173
Y +L+ C + +H + VK+G + L++ Y + G AR+LF
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 174 DE--MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
DE ++ RNV +W +++S + + G + +A +F MP+RD +W ++ G + G F +A
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
I M +D P Q TL LS+ T +G+ +H +V + GL ++N++
Sbjct: 149 IKTLLDM---TADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSV 205
Query: 292 IDMYGKCGSLKEARRAFDR-------------------------------NSKKRLTSWN 320
++MYGKCG + A F+R + + SWN
Sbjct: 206 LNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWN 265
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR---AYF 377
+MI + +G ++ +F M+ + ++ PD T S+L+AC + G V G+ AY
Sbjct: 266 AMIAGYNQNGLDAKALKLFSRML--HESSMAPDEFTITSVLSACANLGNVRIGKQVHAYI 323
Query: 378 -----------------------------KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
++M ++ + + + L++ + G E
Sbjct: 324 LRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMES 383
Query: 409 ALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI-MLANIYG 467
A E+ G+ D V W +++ G + GR D A + +I P Y + + ++
Sbjct: 384 AREMF-GVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCA 442
Query: 468 EL-----GKWDEVRKVRKMLK 483
L GK R +R +L+
Sbjct: 443 SLACLDYGKQIHCRAIRSLLE 463
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 180/521 (34%), Positives = 277/521 (53%), Gaps = 50/521 (9%)
Query: 2 VSVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN 61
V+ + LN N ++L + ++ H+ K +G S YA K +
Sbjct: 198 VTFVSLLNAFTNPELLQVGQKV-HMEIAKAGLELEPRVGTSLVGMYA---------KCGD 247
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
++ A+ IFD L N +T +I YA Q A L M ++ + PN+ Y +L
Sbjct: 248 ISKAQVIFDKLPEKNVVTWTLLIAGYAQQ-GQVDVALELLEKM-QQAEVAPNKITYTSIL 305
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+ C L K VH I++SG+ G +I +
Sbjct: 306 QGCTTPLALEHGKKVHRYIIQSGY-----------------GREIWVV------------ 336
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
A+I+ Y + G +K A LF +P RDV W +++ G Q G +AI FRRM +
Sbjct: 337 ---NALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQ 393
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
I+P+++T AL++ LQ GK IH + G LD ++ +AL+ MY KCGS+
Sbjct: 394 ---GIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSM 450
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+AR F++ S++ + +W +MI A HG+ ++ FE+M + I+PD VTF S+L
Sbjct: 451 DDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKK---QGIKPDKVTFTSVL 507
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
+ACTH GLVE+GR +F+ M Y I+P +EHY C VDLLGRAG EEA V+ M +P
Sbjct: 508 SACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPG 567
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
VWG+LL+ C+I+ + E A + ++++DP++ G + L+NIY G++++ KVR++
Sbjct: 568 PSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQV 627
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
++ R+ K PG SWIEVD +VH FH DK+HP +EIY L
Sbjct: 628 MEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAEL 668
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 207/425 (48%), Gaps = 50/425 (11%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQS--QTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L+ C + L+Q + + +S Q N Y + K +LT AR +FD +
Sbjct: 101 GLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDR 160
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC--PDVLESRGT 133
N +TAMI A+ + + A+ Y M G +P++ + +L + P++L+ G
Sbjct: 161 NIVSWTAMIEAFVAGNQNLE-AYKCYETMKLAG-CKPDKVTFVSLLNAFTNPELLQV-GQ 217
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
K VH +I K+G E P V T+LV Y++ G DI A+ +FD++ ++NVV+WT +I+GY +
Sbjct: 218 K-VHMEIAKAGLELEPRVGTSLVGMYAKCG-DISKAQVIFDKLPEKNVVTWTLLIAGYAQ 275
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
G + A L + M +V PN++T
Sbjct: 276 QGQVDVALELLEKMQQAEVA----------------------------------PNKITY 301
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
L L+ GK +H Y+ ++G + ++ NALI MY KCG LKEAR+ F
Sbjct: 302 TSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPH 361
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ + +W +M+ +A G + +I +F M Q I+PD +TF S L +C+ +++G
Sbjct: 362 RDVVTWTAMVTGYAQLGFHDEAIDLFRRM---QQQGIKPDKMTFTSALTSCSSPAFLQEG 418
Query: 374 RA-YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
++ + +L+ Y ++ ++ LV + + G ++A V M E + V W +++ GC
Sbjct: 419 KSIHQQLVHAGYSLDVYLQ--SALVSMYAKCGSMDDARLVFNQMS-ERNVVAWTAMITGC 475
Query: 433 KIYGR 437
+GR
Sbjct: 476 AQHGR 480
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 184/410 (44%), Gaps = 82/410 (20%)
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
++ +L+ C + + VH I+KSG + +E L++ Y++ G+ + AR++FD
Sbjct: 98 VFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGS-LTDARRVFDG 156
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
+ DRN+VSWTAMI + A +++M +AGC
Sbjct: 157 IRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMK----------LAGC------------- 193
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
+P++VT V L+A + +LQ+G+ +H + + GL+L+ + +L+ MY
Sbjct: 194 -----------KPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMY 242
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCG + +A+ FD+ +K + +W +I +A GQ + ++ + E+M Q + P+ +
Sbjct: 243 AKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKM---QQAEVAPNKI 299
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKT------YRIEPQIEHY---------------- 393
T+ S+L CT +E G+ + + ++ + + I Y
Sbjct: 300 TYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDL 359
Query: 394 --------GCLVDLLGRAGRFEEALEVVKGMK---IEPDEVVWGSLLNGCKIYGRTDFAE 442
+V + G +EA+++ + M+ I+PD++ + S L C + A
Sbjct: 360 PHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSC-----SSPAF 414
Query: 443 FAVKKLIEIDPNNGGYGI------MLANIYGELGKWDEVRKVRKMLKDRN 486
K I + GY + L ++Y + G D+ R V + +RN
Sbjct: 415 LQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERN 464
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 279/482 (57%), Gaps = 16/482 (3%)
Query: 51 LVRFCTLKLS-NLTYARFIFDHLTTPNT-YLYTAMITAY--ASQPAHASSAFSLYRDMVR 106
++ F L S ++ YA + +TP T +L+ I + A +P S+ L+ VR
Sbjct: 26 IISFSALDPSGDIDYALLLLLRTSTPPTVFLFNTTIRGFSRARRPGSLLSSVLLF---VR 82
Query: 107 RG--QPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN 164
G PN F + + + C + + + H ++K+ FE V +++ YS G
Sbjct: 83 MGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVIKNSFEMDVFVRNSIIRFYSVCGR 142
Query: 165 DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQ 224
+ AR +FDE S+ +VVSW +MI G R G+I A SLF M +R+ +WN +I+G Q
Sbjct: 143 -LNDARWVFDESSELDVVSWNSMIDGCIRNGNILEALSLFSKMTERNDISWNMMISGYAQ 201
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
NG +A++ FR M M + PN LV LSA G L G +H Y+ + + +D
Sbjct: 202 NGQPKEALALFREMQML---DQEPNSAILVSVLSACSQLGALDHGCWVHCYIGKKCVRVD 258
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
S +S ALIDMY KCGS+ A +AF + K+ ++++ + I+ A++G SE ++ +FE+M
Sbjct: 259 SILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAISGLAMNGCSEEALQLFEQM-- 316
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
+ I PDGV++I++L AC+H G VE+G YF M+ + I P+++HY C+VDLLGRAG
Sbjct: 317 -KGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIRPELDHYACMVDLLGRAG 375
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLAN 464
EEA + V M I+PD V+WG+LL C++YG + + L+E D N+ G I+L+N
Sbjct: 376 LLEEAEKFVASMPIKPDNVIWGALLGACRVYGNAEMGQRVGSLLVESDQNHDGRYILLSN 435
Query: 465 IYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALES 524
IY E K ++ +VRK ++ R + PGCS IEV VH+F S D++H +TEEIY E
Sbjct: 436 IYAESMKGEDAEQVRKTMRRRKVDRVPGCSLIEVAGFVHEFFSGDRSHEKTEEIYLMWEE 495
Query: 525 MV 526
+V
Sbjct: 496 IV 497
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 176/470 (37%), Positives = 281/470 (59%), Gaps = 22/470 (4%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K+ +L AR FD + + + AM++ YA Q A L+ +MV G +P++ +
Sbjct: 206 KVKDLEAARRYFDCMPERSVVSWNAMLSGYA-QNGLAEEVLRLFDEMVNAG-IEPDETTW 263
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLF 173
V+ +C SRG + +V++ ++ V TAL++ Y++ G+ IG AR++F
Sbjct: 264 VTVISAC----SSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGS-IGAARRIF 318
Query: 174 DEMSD-RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAI 232
DE+ RN V+W AMIS YTRVG++ +A LF++MP R+V WNS+IAG QNG + AI
Sbjct: 319 DELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAI 378
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALI 292
F+ M + + P++VT+V +SA GH G L+LG + ++ N + L NA+I
Sbjct: 379 ELFKEM--ITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMI 436
Query: 293 DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
MY +CGS+++A+R F + + + S+N++I+ FA HG +I + M ++ I P
Sbjct: 437 FMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTM---KEGGIEP 493
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
D VTFI +L AC+H GL+E+GR F+ + +P I+HY C+VDLLGR G E+A
Sbjct: 494 DRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRT 548
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKW 472
++ M +EP V+GSLLN +I+ + + E A KL E++P+N G I+L+NIY G+W
Sbjct: 549 MERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRW 608
Query: 473 DEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+V ++R+ +K KT G SW+E ++H+F D++H R+++IY L
Sbjct: 609 KDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLL 658
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 151/535 (28%), Positives = 256/535 (47%), Gaps = 85/535 (15%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
+I R + +HL+QL + + N++ L+ CT + Y +F+ PN
Sbjct: 6 SIASRVGNFSHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNV 65
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+++T+M+ Y+ HA ++ M G +P+ F+YP ++KS + G H
Sbjct: 66 FVFTSMLRFYSHLQDHAKVVL-MFEHMQGCG-VRPDAFVYPILIKSAGN-----GGIGFH 118
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD------------------- 178
++K G V A+++ Y+R G IG ARK+FDE+ D
Sbjct: 119 AHVLKLGHGSDAFVRNAVIDMYARLG-PIGHARKVFDEIPDYERKVADWNAMVSGYWKWE 177
Query: 179 --------------RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQ 224
RNV++WTAM++GY +V D++ A FD MP+R V +WN++++G Q
Sbjct: 178 SEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQ 237
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
NGL + + F M V+ I P++ T V +SA G L + +++ + L+
Sbjct: 238 NGLAEEVLRLFDEM---VNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLN 294
Query: 285 SFISNALIDMYGKCGSLKEARRAFD-----RNS--------------------------- 312
F+ AL+DMY KCGS+ ARR FD RNS
Sbjct: 295 CFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMP 354
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+ + +WNSMI +A +GQS +I +F+EM+ + + PD VT +S+++AC H G +E
Sbjct: 355 GRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAK--KLTPDEVTMVSVISACGHLGALEL 412
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G + +T+ +I+ I + ++ + R G E+A V + M D V + +L++G
Sbjct: 413 GNWVVRFLTEN-QIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATR-DVVSYNTLISGF 470
Query: 433 KIYGRTDFAEFAVKKLIE--IDPNNGGY-GIMLANIYGELGKWDEVRKVRKMLKD 484
+G A + + E I+P+ + G++ A + G +E RKV + +KD
Sbjct: 471 AAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHA--GLLEEGRKVFESIKD 523
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 185/548 (33%), Positives = 293/548 (53%), Gaps = 39/548 (7%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
L + ++ N + L+Q+ L ++ + + C+ L+++ YA IF
Sbjct: 41 LETHFIDLIHASNSTHKLRQIHGQLYRCNVFSSSRVVTQFISSCS-SLNSVDYAISIFQR 99
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
N+YL+ A+I A + + S+ S + M++ + P++ +P VLKS +
Sbjct: 100 FELKNSYLFNALIRGLA-ENSRFESSISFFVLMLK-WKISPDRLTFPFVLKSAAALSNGG 157
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE----MSDRNVVSWTAM 187
+ +H I+K G E V +LV+ Y + ++G A K+FDE + + +V+ W +
Sbjct: 158 VGRALHCGILKFGLEFDSFVRVSLVDMYVKV-EELGSALKVFDESPESVKNGSVLIWNVL 216
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM--------- 238
I GY R+GD+ A LFDSMP +D +WNS+I G + G A F +M
Sbjct: 217 IHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWT 276
Query: 239 --------------GME-----VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN 279
+E + + RPN T+V ALSA G L G IH Y+ N
Sbjct: 277 TMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGN 336
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
G L+ I AL+DMY KCG+++ A + F +K L W+ MI +A+HG ++ F
Sbjct: 337 GFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYF 396
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
E M + +PD V F+++LNAC+H G V +G +F M + Y IEP ++HY +VD+
Sbjct: 397 EWM---KFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDM 453
Query: 400 LGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYG 459
LGRAGR +EAL+ ++ M I PD VVWG+L C+ + + AE A KKL++++P + G
Sbjct: 454 LGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSY 513
Query: 460 IMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
+ L+N Y +G+WD+ +VR ++D A+K PG S+IEVD ++H+F + D TH R EIY
Sbjct: 514 VFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIY 573
Query: 520 DALESMVA 527
L+ + A
Sbjct: 574 SKLDEISA 581
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 195/614 (31%), Positives = 304/614 (49%), Gaps = 118/614 (19%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFD 70
N L++L C + L+ + + + G TN+ KL+ F L LTYA +FD
Sbjct: 2 NHPSLSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFD 61
Query: 71 HLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
+ PN ++ M +A S P SA LY M+ G PN + +P +LK+C
Sbjct: 62 SIQEPNLLIWNTMFRGHALSSDPV---SALYLYVCMISLGL-VPNSYTFPFLLKACAKSK 117
Query: 129 ESRGTKMVHTQI-------------------VKSG------------------------- 144
R + +H + VK+G
Sbjct: 118 AFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIK 177
Query: 145 --------------FEQYPVVET----ALVNSYSRSGNDIGIARKLFDEMSDRNVV---- 182
F++ PV + AL++ Y+ +GN A +LF EM NV
Sbjct: 178 GYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGN-YKEALELFKEMMKTNVKPDES 236
Query: 183 ----------------------SW-------------TAMISGYTRVGDIKNAASLFDSM 207
SW A+I Y + G+++ A+ LF+ +
Sbjct: 237 TMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGL 296
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
+DV +WN++I G T L+ +A+ F+ M + PN+VT++ L A H G +
Sbjct: 297 SYKDVISWNTLIGGYTHMNLYKEALLLFQEM---LRSGESPNEVTMLSILPACAHLGAID 353
Query: 268 LGKVIHGYVYR--NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
+G+ IH Y+ + G+ S + +LIDMY KCG ++ A++ FD + L+SWN+MI
Sbjct: 354 IGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFG 413
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
FA+HG++ + +F M + I PD +TF+ LL+AC+H G+++ GR F+ MT+ Y+
Sbjct: 414 FAMHGRANPAFDIFSRMRK---DGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYK 470
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
I P++EHYGC++DLLG +G F+EA E++ M+++PD V+W SLL CK++G + E
Sbjct: 471 ITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFA 530
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
+ LI+I+P N G ++L+NIY G+W+EV K R +L D+ K PGCS IE+D VH+F
Sbjct: 531 QNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEF 590
Query: 506 HSLDKTHPRTEEIY 519
DK HPR EIY
Sbjct: 591 IIGDKLHPRNREIY 604
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 172/465 (36%), Positives = 275/465 (59%), Gaps = 16/465 (3%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + N + ++IT Y Q A L+ +M+ G P++ V+ +C
Sbjct: 205 ARRVFDAMPERNVVSWNSLITCY-EQNGPVGEALMLFVEMMAAGF-SPDEVTLSSVMSAC 262
Query: 125 PDVLESRGTKMVHTQIVKSG-FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
+ R + VH +VK V+ ALV+ Y++ G AR +FD M R++VS
Sbjct: 263 AGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWE-ARCIFDSMPSRSIVS 321
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
T++++GY + ++++A +F M +++V AWN +IA QNG +AI F ++
Sbjct: 322 ETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLK---R 378
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL------DLDSFISNALIDMYGK 297
D+I P T L+A G+ LQLG+ H +V + G + D F+ N+L+DMY K
Sbjct: 379 DSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLK 438
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
GS+ + + F+R + + SWN+MI +A +G++++++ +FE M+ C + N PD VT
Sbjct: 439 TGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERML-CSNEN--PDSVTM 495
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
I +L+AC H GLV++GR YF MT+ + I P +HY C+VDLLGRAG +EA E++ M
Sbjct: 496 IGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMP 555
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+EPD V+W SLL C+++ + E+ +L E+DP N G ++L+N+Y E+GKW EV +
Sbjct: 556 MEPDSVLWASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFR 615
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
VR+ +KDR K PGCSWIE+ ++++ F + DK HP EI++ L
Sbjct: 616 VRRSMKDRGVSKQPGCSWIEIGRKMNVFLARDKRHPCRNEIHNTL 660
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 191/395 (48%), Gaps = 19/395 (4%)
Query: 104 MVRRGQPQPNQFIYPHVLKSCP--DVLES----RGTKMVHTQIVKSGFEQYPVVETALVN 157
M R Q + H+ S P D+L S G + H +I+KS + LV+
Sbjct: 1 MARHLHHHHGQELVAHLRASSPLADLLRSAPNLSGARAAHARILKSPVAGETFLLNTLVS 60
Query: 158 SYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNS 217
+Y+R G + AR++FDE+ RN S+ A++S Y R+G A +LF+++PD D ++N+
Sbjct: 61 TYARLGR-LRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNA 119
Query: 218 VIAGCTQNGL--FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGY 275
V+A ++G +DA+ F M +D+ N + ALSA + G+ +HG
Sbjct: 120 VVAALARHGRGHAADALRFLAAMH---ADDFVLNAYSFASALSACAAEKDSRTGEQVHGL 176
Query: 276 VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
V R+ D I +AL+DMY KC ++ARR FD ++ + SWNS+I + +G +
Sbjct: 177 VARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEA 236
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ +F EMM PD VT S+++AC +GR M K R+ +
Sbjct: 237 LMLFVEMMAA---GFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNA 293
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNN 455
LVD+ + GR EA + M V S+L G + A+ +++E N
Sbjct: 294 LVDMYAKCGRTWEARCIFDSMPSR-SIVSETSILTGYAKSANVEDAQVVFSQMVE--KNV 350
Query: 456 GGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
+ +++A Y + G+ +E ++ LK + + T
Sbjct: 351 IAWNVLIA-AYAQNGEEEEAIRLFVQLKRDSIWPT 384
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 209/489 (42%), Gaps = 108/489 (22%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRD------------ 103
+L L AR +FD + NT+ Y A+++AYA +P A + F D
Sbjct: 64 RLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAA 123
Query: 104 MVRRGQPQP-----------------NQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFE 146
+ R G+ N + + L +C +SR + VH + +S
Sbjct: 124 LARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHA 183
Query: 147 QYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDS 206
+ +ALV+ Y++ AR++FD M +RNVVSW ++I+ Y
Sbjct: 184 DDVHIRSALVDMYAKCERPED-ARRVFDAMPERNVVSWNSLITCY--------------- 227
Query: 207 MPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGML 266
QNG +A+ F M ++ P++VTL +SA
Sbjct: 228 ----------------EQNGPVGEALMLFVEM---MAAGFSPDEVTLSSVMSACAGLAAD 268
Query: 267 QLGKVIHGYVYR-NGLDLDSFISNALIDMYGKCGSLKEARRAFD---------------- 309
+ G+ +H ++ + + L D ++NAL+DMY KCG EAR FD
Sbjct: 269 REGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTG 328
Query: 310 ---------------RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
+ +K + +WN +I ++A +G+ E +I +F ++ R +I P
Sbjct: 329 YAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKR---DSIWPTH 385
Query: 355 VTFISLLNACTHGGLVEQG-RAYFKLMTKTYRIE--PQIEHY--GCLVDLLGRAGRFEEA 409
T+ ++LNAC + ++ G +A+ ++ + +R + P+ + + LVD+ + G ++
Sbjct: 386 YTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDG 445
Query: 410 LEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIM-LANIYGE 468
+V + M D V W +++ G GR A ++++ + N ++ + + G
Sbjct: 446 AKVFERMAAR-DNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGH 504
Query: 469 LGKWDEVRK 477
G DE R+
Sbjct: 505 SGLVDEGRR 513
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/462 (35%), Positives = 271/462 (58%), Gaps = 40/462 (8%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR + D + N +TAMI+ Y SQ +AS A L+ +M+ G PN+F + VL SC
Sbjct: 531 ARRVLDEMPERNVVSWTAMISGY-SQRGYASEALHLFVEMLMSGT-APNEFTFATVLTSC 588
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ + +H+ ++K+ FE + V ++L++ Y+++G I AR++FD + +R+VVS
Sbjct: 589 TSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGK-ICEARRVFDGLPERDVVSC 647
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
TA+ISGY Q GL +A+ FRR+ E
Sbjct: 648 TAIISGY-------------------------------AQLGLDEEALDLFRRLQRE--- 673
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+R N VT L+A+ L G+ +H +V R L + N+LIDMY KCGSL +
Sbjct: 674 GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYS 733
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
RR FD ++ + SWN+M+ ++ HG ++ +F+ M +++ ++PD VTF+++L+ C
Sbjct: 734 RRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMK--EENKVKPDSVTFLAVLSGC 791
Query: 365 THGGLVEQG-RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
+HGG+ ++G +++++ + EP+IEHYGC+VDL GRAGR EEA E +K M EP
Sbjct: 792 SHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAA 851
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+WGSLL C+++ EF ++L+EI+ N G ++L+N+Y G+WD+VR VR+++K
Sbjct: 852 IWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMK 911
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
++ K PG SWIE+D+ +H FH+ D++HPR EE++ + +
Sbjct: 912 EKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVREL 953
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 179/405 (44%), Gaps = 80/405 (19%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
Y VL C R + VH ++K+ +E + T L+ Y++ +G AR++ DE
Sbjct: 480 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKC-RCLGDARRVLDE- 537
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
MP+R+V +W ++I+G +Q G S+A+ F
Sbjct: 538 ------------------------------MPERNVVSWTAMISGYSQRGYASEALHLFV 567
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M M PN+ T L++ + QLG+ IH V + + F+ ++L+DMY
Sbjct: 568 EMLM---SGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYA 624
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
K G + EARR FD ++ + S ++I+ +A G E ++ +F R Q +R + VT
Sbjct: 625 KAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFR---RLQREGMRSNYVT 681
Query: 357 FISLLNACTHGGLVEQGRA-----------------------YFKLMTKTY--RI----- 386
+ S+L A + ++ GR Y K + TY RI
Sbjct: 682 YASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMP 741
Query: 387 EPQIEHYGCLVDLLGRAGRFEEALEVVKGM----KIEPDEVVWGSLLNGCKIYGRTD--- 439
E + + ++ + G EA+E+ K M K++PD V + ++L+GC G D
Sbjct: 742 ERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGL 801
Query: 440 --FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK-VRKM 481
F E +K +P YG ++ +++G G+ +E + ++KM
Sbjct: 802 EIFYEMVNQK-DGFEPEIEHYGCVV-DLFGRAGRVEEAFEFIKKM 844
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 125/272 (45%), Gaps = 26/272 (9%)
Query: 1 MVSVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS 60
+ S T+ L +Q+ +++ + + +H+ +G S + YA K
Sbjct: 585 LTSCTSSSGFQLGRQIHSLVIKTSFESHI--------FVGSSLLDMYA---------KAG 627
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
+ AR +FD L + TA+I+ YA Q A L+R + R G + N Y V
Sbjct: 628 KICEARRVFDGLPERDVVSCTAIISGYA-QLGLDEEALDLFRRLQREGM-RSNYVTYASV 685
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
L + + + VH+ ++++ Y V++ +L++ YS+ G+ + +R++FD M +R
Sbjct: 686 LTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGS-LTYSRRIFDSMPERT 744
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDR-----DVPAWNSVIAGCTQNGLFSDAISFF 235
V+SW AM+ GY++ G + A LF M + D + +V++GC+ G+ + F
Sbjct: 745 VISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIF 804
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
M + D P C + G G ++
Sbjct: 805 YEM-VNQKDGFEPEIEHYGCVVDLFGRAGRVE 835
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/430 (38%), Positives = 257/430 (59%), Gaps = 15/430 (3%)
Query: 101 YRDMVRRGQPQPNQFIYPHVLKSCP----DVLESRGTKMVHTQIVKSGFEQYPVVETALV 156
+ DM R G P Y VL +C DVL VH ++V SG VE ALV
Sbjct: 132 FVDMARAGA-APTPVTYVSVLSACGKGTGDVLLG---MQVHGRVVGSGVLPDLRVENALV 187
Query: 157 NSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWN 216
+ Y+ D+ A KLFD M R+VVSWT+++SG TR+G + A LF MP+RD +W
Sbjct: 188 DMYAECA-DMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWT 246
Query: 217 SVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV 276
++I G Q F +A+ FR M N+ ++ T+V ++A G L++G+ + Y+
Sbjct: 247 AMIDGYVQAARFREALEMFREMQ---CSNVSADEFTMVSVITACAQLGALEMGEWVRVYM 303
Query: 277 YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSI 336
R G+ +D+F+ NALIDMY KCGS++ A F + +W ++I A++G E +I
Sbjct: 304 SRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAI 363
Query: 337 CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCL 396
+F M+ + PD VTFI +L ACTH GLV++GR +F M +TY I P + HYGC+
Sbjct: 364 EMFHRMIGVSE---TPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCI 420
Query: 397 VDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNG 456
+DL GRAG+ EAL+ + M + P+ +WG+LL C+++G ++ E ++L+++DP N
Sbjct: 421 IDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENS 480
Query: 457 GYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTE 516
+L+NIY + +W++VR++R + ++ K PGCS IE++ +H+F + D++HP ++
Sbjct: 481 TVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSK 540
Query: 517 EIYDALESMV 526
EIY LES++
Sbjct: 541 EIYCKLESII 550
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 172/452 (38%), Gaps = 110/452 (24%)
Query: 92 AHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVV 151
A A + Y M+ RG P+ + +P +LK+ + + VH +VK G + V
Sbjct: 22 AAREDAVAGYARMLARGA-MPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHV 80
Query: 152 ETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRD 211
T+LV +Y+ G+ L + D VV W A+ISG+ R A F M
Sbjct: 81 ATSLVTAYAAGGDGAAARALLSERERDTPVV-WNALISGHNRCRRFGEACCSFVDMA--- 136
Query: 212 VPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGH-TGMLQLGK 270
R G P VT V LSA G TG + LG
Sbjct: 137 -------------------------RAGAA------PTPVTYVSVLSACGKGTGDVLLGM 165
Query: 271 VIHGYVYRNGLDLDSFISNALIDMYGKC-------------------------------G 299
+HG V +G+ D + NAL+DMY +C G
Sbjct: 166 QVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLG 225
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
+ EAR F R ++ SW +MI+ + + ++ +F EM Q N+ D T +S
Sbjct: 226 RVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREM---QCSNVSADEFTMVS 282
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK----- 414
++ AC G +E G + ++ I+ L+D+ + G E AL+V K
Sbjct: 283 VITACAQLGALEMGE-WVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHR 341
Query: 415 -----------------------------GMKIEPDEVVWGSLLNGCKIYGRTDFA-EF- 443
G+ PDEV + +L C G D EF
Sbjct: 342 DKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFF 401
Query: 444 -AVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
++++ I PN YG ++ +++G GK E
Sbjct: 402 LSMRETYNIAPNVVHYGCII-DLFGRAGKITE 432
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/473 (36%), Positives = 283/473 (59%), Gaps = 14/473 (2%)
Query: 62 LTYARFIFD--HLTTPNTYLYTAMITAYA---SQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+ YA IF HL ++L+ +I A S P S S+Y M R + P+
Sbjct: 8 IAYANPIFHIRHLKL-ESFLWNIIIRAIVHNVSSP-QRHSPISVYLRM-RNHRVSPDFHT 64
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+P +L S + L + H QI+ G ++ P V T+L+N YS G D+ A+++FD+
Sbjct: 65 FPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCG-DLRSAQRVFDDS 123
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+++ +W ++++ Y + G I +A LFD MP+R+V +W+ +I G G + +A+ FR
Sbjct: 124 GSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFR 183
Query: 237 RMGMEVSDN--IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
M + + +RPN+ T+ LSA G G L+ GK +H Y+ + +++D + ALIDM
Sbjct: 184 EMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDM 243
Query: 295 YGKCGSLKEARRAFDR-NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
Y KCGSL+ A+R F+ SKK + ++++MI A++G ++ +F EM NI P+
Sbjct: 244 YAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMT--TSDNINPN 301
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
VTF+ +L AC H GL+ +G++YFK+M + + I P I+HYGC+VDL GR+G +EA +
Sbjct: 302 SVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFI 361
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
M +EPD ++WGSLL+G ++ G E A+K+LIE+DP N G ++L+N+Y + G+W
Sbjct: 362 ASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWM 421
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
EV+ +R ++ + K PGCS++EV+ VH+F D++ +E IY L+ ++
Sbjct: 422 EVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIM 474
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 190/560 (33%), Positives = 289/560 (51%), Gaps = 73/560 (13%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAY 87
++QL +F F + +L+ + K+++L YAR IFD + + + +I Y
Sbjct: 29 VEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCY 88
Query: 88 A-SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFE 146
+Q +H L+ ++V + P+ F P V+K C + + K +H +K GF
Sbjct: 89 VENQFSH--DGIVLFHELVH--EYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFG 144
Query: 147 QYPVVETALVN-------------------------------SYSRSGN-DIGI------ 168
V+ +LVN Y+R G DI +
Sbjct: 145 SDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEM 204
Query: 169 -----------------------ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
ARKLFD+M RN+VSW AMI+GY + GD +A LF
Sbjct: 205 PERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFY 264
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
MP D+ WN +IAG NG F DA+ F M + RP+ TLV LSA+ +
Sbjct: 265 QMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMM---LKLGSRPSHATLVSVLSAVSGLAV 321
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L G+ IH Y+ +NG +LD + +LI+MY KCG ++ A F KK++ W ++I
Sbjct: 322 LGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVG 381
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
+HG + +++ +F EM + ++P+ + FI +LNAC H GLV+ GR YF +M Y+
Sbjct: 382 LGIHGMANHALALFLEMCKT---GLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYK 438
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
IEP +EHYGCLVD+L RAG EEA ++ M I P++V+W SLL G + +G+ D E+A
Sbjct: 439 IEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAA 498
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
+++IE+ P G I+L+N+Y G W++V VR+M+ R K PGCS +E +H+F
Sbjct: 499 QRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEF 558
Query: 506 HSLDKTHPRTEEIYDALESM 525
D +HP+T+EIY + M
Sbjct: 559 IVGDISHPQTKEIYAKMSEM 578
>gi|23617093|dbj|BAC20776.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 681
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 161/389 (41%), Positives = 238/389 (61%), Gaps = 8/389 (2%)
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD-RNVVSWTAMISGYTRV 194
VH VK+G V ALV+ Y SG D+G R++FDE+ R+V++W +++GY R
Sbjct: 168 VHALAVKAGAAGDLFVRNALVHFYGVSG-DVGAMRRVFDELPRVRDVLTWNEVLAGYVRA 226
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + A +FD MP RD +W++++ G + A+ FR M V +RPNQ +V
Sbjct: 227 GMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNM---VEQGVRPNQAAVV 283
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
ALSA G+L+ GK +H V R+G+ + + AL+DMY KCG + AR FD ++
Sbjct: 284 TALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRR 343
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ +WN+MI A HG +++ +FE + + P VTF+ +LN C+ GLV +GR
Sbjct: 344 DVFAWNAMICGLAAHGLGRDAVELFERFI---SEGLSPTNVTFVGVLNGCSRSGLVAEGR 400
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
YFKL+ + YRIEP++EHYGC+VDLLGRAG EA+E+++GM I PD V+WG++L+ CK
Sbjct: 401 RYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKT 460
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+G D KLIE+DP + GY ++L+ IY + KWDEVR+VRK++ R K+ G S
Sbjct: 461 HGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWS 520
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
+E +VH+F D H + +IYD L+
Sbjct: 521 LMEAHGKVHKFLVGDTYHKDSVQIYDTLD 549
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 146/359 (40%), Gaps = 83/359 (23%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
+T AR +FD + + ++ ++ Y + A ++R+MV +G +PNQ L
Sbjct: 229 MTVAREVFDEMPVRDEISWSTLVGGYVKE-EELEVALGVFRNMVEQGV-RPNQAAVVTAL 286
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+ + K VH + +SG V ALV+ Y++ G + +AR++FD M R+V
Sbjct: 287 SAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGC-VAVAREVFDGMRRRDV 345
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
+W AM I G +GL DA+ F R
Sbjct: 346 FAWNAM-------------------------------ICGLAAHGLGRDAVELFERF--- 371
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV---YRNGLDLDSFISNALIDMYGKC 298
+S+ + P VT V L+ +G++ G+ + YR +++ + ++D+ G+
Sbjct: 372 ISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHY--GCMVDLLGRA 429
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G + EA I + E M +I PD V +
Sbjct: 430 GLVPEA-------------------------------IELIEGM------HIAPDPVLWG 452
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEP-QIEHYGCLVDLLGRAGRFEEALEVVKGM 416
++L++C GLV+ G + K ++P +Y L + +A +++E EV K M
Sbjct: 453 TILSSCKTHGLVDLG---VSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLM 508
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 39/202 (19%)
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR--LT-------- 317
LG +H + G D F+ NAL+ YG G + RR FD + R LT
Sbjct: 164 LGSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGY 223
Query: 318 ----------------------SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
SW++++ + + E ++ VF M+ + +RP+
Sbjct: 224 VRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMV---EQGVRPNQA 280
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG-CLVDLLGRAGRFEEALEVVK 414
++ L+A GL+E G+ ++ ++ P + G LVD+ + G A EV
Sbjct: 281 AVVTALSAAARLGLLEHGKFVHNVVQRSGM--PVCMNVGAALVDMYAKCGCVAVAREVFD 338
Query: 415 GMKIEPDEVVWGSLLNGCKIYG 436
GM+ D W +++ G +G
Sbjct: 339 GMR-RRDVFAWNAMICGLAAHG 359
>gi|357477567|ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 611
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/532 (34%), Positives = 294/532 (55%), Gaps = 33/532 (6%)
Query: 6 NQLNQTLNQQVLAILERCNH-INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN--L 62
N +N++ + +L++L CN + KQ+ + L G F+ KL+ C + +S+ L
Sbjct: 2 NIINKSCEEILLSLLSNCNTTLKTTKQIHTHLYVTGLHTHPFFFGKLLLNCAVSISDHVL 61
Query: 63 TYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
Y+ +F H P+T++Y +I + S + S+ + ++R P+ F + LK
Sbjct: 62 NYSLRLFHHFPNPDTFMYNTLIRSL-SHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLK 120
Query: 123 SCP-DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
D R +H+ + GF+ + V T L++ Y+ G ARK+FDEMS NV
Sbjct: 121 GIANDGCSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGC-YEYARKVFDEMSQPNV 179
Query: 182 VSWTAMISGYTRVGDIKNAAS-------LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
V+W A+++ R G + +F M RD +W+++I G ++G F DA F
Sbjct: 180 VAWNAVVTACFRCGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGF 239
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
F+ + + D RP++V+L LSA G + GK++HG++ + G ++NALID
Sbjct: 240 FKEL---LRDRNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDT 296
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KCG++ A+ F+ S A+HG+++ +I VF EM ++ +RPDG
Sbjct: 297 YSKCGNVDMAKLVFNI--------------SLAMHGRADEAIRVFHEM---EESGVRPDG 339
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
VTFISLL AC+H GLVEQG A F M Y IEP IEHYGC+VDL GRA R ++A E ++
Sbjct: 340 VTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIR 399
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M I P+ ++W +LL C I+G + AE +L E+DPNN G ++L+N+Y GKW +
Sbjct: 400 QMPILPNVIIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKD 459
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
V +R+ + +++ K PG S IE+DK + F + +K + T+E +D L ++
Sbjct: 460 VAGIRRTMIEQSMKKIPGWSMIEIDKVNYGFVAGEKPNEVTKEAHDKLREIM 511
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/528 (32%), Positives = 286/528 (54%), Gaps = 52/528 (9%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDH 71
N L+++++C+ LKQ+ + + G F A +L+ L +L YA+ +FD
Sbjct: 35 NHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQ 94
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ PN Y + +I AYAS ++ + ++ M+ + P++F +P ++K+ ++ E
Sbjct: 95 IPHPNLYTWNTLIRAYASS-SNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELF 153
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
K H ++K G+D+ I L I Y
Sbjct: 154 TGKAFHGMVIKVLL-----------------GSDVFILNSL---------------IHFY 181
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
+ G++ +F + P RDV +WNS+I Q G +A+ F+ M + N++PN +
Sbjct: 182 AKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEME---TQNVKPNGI 238
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
T+V LSA + G+ +H Y+ RN + +SNA++DMY KCGS+++A+R FD+
Sbjct: 239 TMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKM 298
Query: 312 SKKRLTSWNSMI------------NSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
+K + SW +M+ A+HG +++I +F +M Q+ ++P+ VTF +
Sbjct: 299 PEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKM---QEDKVKPNAVTFTN 355
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
+L AC+H GLVE+GR +F M Y + P ++HY C+VD+LGRAG EEA+E+++ M +
Sbjct: 356 ILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMA 415
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVR 479
P VWG+LL C I+ AE A +LIE++P N G ++L+NIY + GKWD V +R
Sbjct: 416 PAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLR 475
Query: 480 KMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
K+++D K PGCS IEVD VH+F D +HP ++IY L+ +VA
Sbjct: 476 KLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVA 523
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/528 (31%), Positives = 294/528 (55%), Gaps = 39/528 (7%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDHLTTPNTYLYTAMI 84
+ +L QL + G Q ++ + L++ + SN +A +F + PN +++ +I
Sbjct: 46 LQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVI 105
Query: 85 TAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG 144
+ A Y MV +PN+F YP + K+C + + +H +VK G
Sbjct: 106 KG-CLENNKLFKAIYFYGRMVI--DARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHG 162
Query: 145 FEQYPVVETALVNSYSRSG-------------NDI-------------GI---ARKLFDE 175
+++A ++ Y+ G +D+ G+ A+ LF +
Sbjct: 163 IGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQ 222
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
M +N+ SW MI+G + G++ +A LFD M +RD +W+S++ G G + +A+ F
Sbjct: 223 MPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIF 282
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
++M E RP + L L+A + G + G+ +H Y+ RN + LD+ + AL+DMY
Sbjct: 283 QQMQRE---ETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMY 339
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCG L F+ ++ + +WN+MI A+HG++E+++ +F ++ Q+ ++P+G+
Sbjct: 340 AKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKL---QEGRMKPNGI 396
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
T + +L AC H G V++G F+ M + Y ++P++EHYGC+VDLLGR+G F EA +++
Sbjct: 397 TLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINS 456
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M ++P+ VWG+LL C+I+G D AE K L+E++P N G ++L+NIY ++G++D+V
Sbjct: 457 MPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDV 516
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K+RK++KDR PG S ++++ VH+F D +HP+ +EIY L+
Sbjct: 517 SKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLK 564
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 163/466 (34%), Positives = 273/466 (58%), Gaps = 10/466 (2%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L YA+ IF+ + N Y + +MI Y Q A L++ M G +P+ F +L
Sbjct: 530 LNYAKEIFNRMAERNAYSWNSMIEGY-QQNGETQEALRLFKQMQLNG-IKPDCFSLSSML 587
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
SC + +S+ + +H IV++ E+ +++ LV+ Y++ G+ + A K++D+ ++V
Sbjct: 588 SSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGS-MDYAWKVYDQTIKKDV 646
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
+ M+S + G +A +LFD M R+ WNS++AG GL ++ + F M
Sbjct: 647 ILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEM--- 703
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG-LDLDSFISNALIDMYGKCGS 300
+ +I + +T+V ++ L+ G +H + + G ++ + AL+DMY KCG+
Sbjct: 704 LESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGA 763
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+ +AR FD + K + SWN+MI+ ++ HG S+ ++ ++EEM + + P+ VTF+++
Sbjct: 764 ITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPK---KGMYPNEVTFLAI 820
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC+H GLVE+G F M + Y IE + EHY C+VDLLGRAGR E+A E V+ M IEP
Sbjct: 821 LSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEP 880
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
+ WG+LL C+++ D A ++L E+DP N G ++++NIY G+W EV +R+
Sbjct: 881 EVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQ 940
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
M+K + K PG SWIE++ ++ FH+ KTHP+TEEIY+ L +
Sbjct: 941 MMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLT 986
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 174/400 (43%), Gaps = 65/400 (16%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A +F L N Y A++ Y Q A A LY DM QP+QF + +L C
Sbjct: 431 AHQVFRSLLERNEVSYNALLAGYV-QEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLC 489
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ + +H ++++ + +VET LV+ YS G + A+++F+ M++RN SW
Sbjct: 490 ANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGR-LNYAKEIFNRMAERNAYSW 548
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+MI GY QNG +A+ F++M + +
Sbjct: 549 NSMIEGY-------------------------------QQNGETQEALRLFKQMQL---N 574
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
I+P+ +L LS+ Q G+ +H ++ RN ++ + + L+DMY KCGS+ A
Sbjct: 575 GIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYA 634
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM---------------------- 342
+ +D+ KK + N M+++F G++ ++ +F++M
Sbjct: 635 WKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKK 694
Query: 343 ------MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCL 396
+ + +I D +T ++++N C+ +E G L+ K + + L
Sbjct: 695 ESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETAL 754
Query: 397 VDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
VD+ + G +A V M + V W ++++G +G
Sbjct: 755 VDMYSKCGAITKARTVFDNMN-GKNIVSWNAMISGYSKHG 793
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 214/513 (41%), Gaps = 84/513 (16%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-----LSNLTYARFIFDHL 72
++++ C N ++ +S T + + N A+ + + L L +L YAR +F+ +
Sbjct: 76 SLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEM 135
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
N + MI AYA + LY M G ++F +P V+K+C + + G
Sbjct: 136 PERNLTAWNTMILAYARVDDYM-EVLRLYGRMRGSGNFS-DKFTFPSVIKACIAMEDMGG 193
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+ + + +VK+G V ALV+ Y+R G + A DE+ +VV+W A+I+GY
Sbjct: 194 VRQLQSSVVKAGLNCNLFVGGALVDGYARFGW-MDDAVTSLDEIEGTSVVTWNAVIAGYV 252
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
++ + A +FD M I C P+ T
Sbjct: 253 KILSWEEAWGIFDRMLK---------IGVC-------------------------PDNFT 278
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
AL G GK +H + G D+F+ NALIDMY KC + + FD
Sbjct: 279 FASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMG 338
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
++ +WNS+I++ A G +++ +F +R Q+ + + S+L A + +
Sbjct: 339 ERNQVTWNSIISAEAQFGHFNDALVLF---LRMQESGYKSNRFNLGSILMASAGLADIGK 395
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
GR + + + I LVD+ + G EEA +V + + +E +EV + +LL G
Sbjct: 396 GRELHGHLVRNL-LNSDIILGSALVDMYSKCGMVEEAHQVFRSL-LERNEVSYNALLAGY 453
Query: 433 KIYGRTDFA----------------EFAVKKLIEIDPN----NGGYGIM----------- 461
G+ + A +F L+ + N N G I
Sbjct: 454 VQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKN 513
Query: 462 ------LANIYGELGKWDEVRKVRKMLKDRNAY 488
L ++Y E G+ + +++ + +RNAY
Sbjct: 514 IIVETELVHMYSECGRLNYAKEIFNRMAERNAY 546
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 183/421 (43%), Gaps = 58/421 (13%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARF--------IFDHLTTPNTYLY 80
++QLQS + G + F LV YARF D + + +
Sbjct: 194 VRQLQSSVVKAGLNCNLFVGGALVD---------GYARFGWMDDAVTSLDEIEGTSVVTW 244
Query: 81 TAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQI 140
A+I Y + A+ ++ M++ G P+ F + L+ C + G K VH+++
Sbjct: 245 NAVIAGYV-KILSWEEAWGIFDRMLKIGVC-PDNFTFASALRVCGALRSRDGGKQVHSKL 302
Query: 141 VKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
+ GF+ V AL++ Y++ D ++
Sbjct: 303 IACGFKGDTFVGNALIDMYAK--------------------------------CDDEESC 330
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
+FD M +R+ WNS+I+ Q G F+DA+ F RM + R N +++ A + +
Sbjct: 331 LKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGL 390
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
G G+ +HG++ RN L+ D + +AL+DMY KCG ++EA + F ++ S+N
Sbjct: 391 ADIGK---GRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYN 447
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
+++ + G++E ++ ++ +M + I+PD TF +LL C + QGR +
Sbjct: 448 ALLAGYVQEGKAEEALELYHDMQ--SEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHL 505
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+ I I LV + GR A E+ M E + W S++ G + G T
Sbjct: 506 IRA-NITKNIIVETELVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSMIEGYQQNGETQE 563
Query: 441 A 441
A
Sbjct: 564 A 564
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 174/383 (45%), Gaps = 41/383 (10%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
KQ+ S L G F L+ K + +FD + N + ++I+A A
Sbjct: 296 KQVHSKLIACGFKGDTFVGNALIDMYA-KCDDEESCLKVFDEMGERNQVTWNSIISAEA- 353
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
Q H + A L+ M G + N+F +L + + + + +H +V++
Sbjct: 354 QFGHFNDALVLFLRMQESGY-KSNRFNLGSILMASAGLADIGKGRELHGHLVRN------ 406
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
L+NS +++ +A++ Y++ G ++ A +F S+ +
Sbjct: 407 -----LLNS---------------------DIILGSALVDMYSKCGMVEEAHQVFRSLLE 440
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
R+ ++N+++AG Q G +A+ + M E D I+P+Q T L+ + G
Sbjct: 441 RNEVSYNALLAGYVQEGKAEEALELYHDMQSE--DGIQPDQFTFTTLLTLCANQRNDNQG 498
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
+ IH ++ R + + + L+ MY +CG L A+ F+R +++ SWNSMI + +
Sbjct: 499 RQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQN 558
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
G+++ ++ +F++M Q + I+PD + S+L++C ++GR + + E
Sbjct: 559 GETQEALRLFKQM---QLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEG 615
Query: 390 IEHYGCLVDLLGRAGRFEEALEV 412
I LVD+ + G + A +V
Sbjct: 616 ILQV-VLVDMYAKCGSMDYAWKV 637
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 168/388 (43%), Gaps = 60/388 (15%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP-----QP--- 112
N Y+R F L PN+ ++++ H ++ L + +P +P
Sbjct: 17 NCHYSRHFF-LLPNPNS-------KSFSAHFGHTTTTIKLKFNGPDSPKPTSIHTKPASD 68
Query: 113 -NQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSG--NDIGIA 169
N Y +++ C D + K +HTQ++ +G+ + T ++ Y+RSG +D+ A
Sbjct: 69 VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYA 128
Query: 170 RKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
RKLF+EM +RN+ +W MI Y RV D L+ M +G FS
Sbjct: 129 RKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRM---------------RGSGNFS 173
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
D +F P+ + A+ +G LQ V + GL+ + F+
Sbjct: 174 DKFTF-------------PSVIKACIAMEDMGGVRQLQ------SSVVKAGLNCNLFVGG 214
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
AL+D Y + G + +A + D + +WN++I + E + +F+ M++
Sbjct: 215 ALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKI---G 271
Query: 350 IRPDGVTFISLLNACTHGGLVEQGR-AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
+ PD TF S L C + G+ + KL+ ++ + + + L+D+ + E
Sbjct: 272 VCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGN--ALIDMYAKCDDEES 329
Query: 409 ALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
L+V M E ++V W S+++ +G
Sbjct: 330 CLKVFDEMG-ERNQVTWNSIISAEAQFG 356
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 69/166 (41%), Gaps = 34/166 (20%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K +T AR +FD++ N + AMI+ Y S+ + A LY +M ++G PN+ +
Sbjct: 760 KCGAITKARTVFDNMNGKNIVSWNAMISGY-SKHGCSKEALILYEEMPKKGM-YPNEVTF 817
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+L +C HT +V+ G + ++ D I K
Sbjct: 818 LAILSACS-----------HTGLVEEGLRIFTSMQ-----------EDYNIEAK------ 849
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMP-DRDVPAWNSVIAGC 222
+T M+ R G +++A + MP + +V W +++ C
Sbjct: 850 ---AEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGAC 892
>gi|449470352|ref|XP_004152881.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/514 (34%), Positives = 284/514 (55%), Gaps = 41/514 (7%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHL 72
+ +LA+L+ CN + L+++ + + G A KL+ FC + +S +L YA+ +F +
Sbjct: 5 KAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQM 64
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
P T + ++I +A Q + A Y MV P+ F + VLK+C + R
Sbjct: 65 ECPQTEAWNSIIRGFA-QSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKAERK 123
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
K VH +++ G++ +V T LV YS G+ + IAR++FD+M R++V+W AMIS +
Sbjct: 124 CKEVHGSVIRCGYDADVIVCTNLVKCYSAMGS-VCIARQVFDKMPARDLVAWNAMISCF- 181
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
+Q GL +A+ + +M S+N+ + T
Sbjct: 182 ------------------------------SQQGLHQEALQTYNQMR---SENVDIDGFT 208
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
LV +S+ H G L +G +H + NGLD ++ NALIDMY KCGSL +A FDR
Sbjct: 209 LVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNALIDMYAKCGSLDQAILIFDRMQ 268
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+K + +WNSMI + +HG+ +I F++M+ + I+P+ VTF+ LL C+H GLV++
Sbjct: 269 RKDIFTWNSMIVGYGVHGRGSEAIYCFQQML---EARIQPNPVTFLGLLCGCSHQGLVQE 325
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G YF LM+ +R++P+++HYGCLVDL GRAG+ ++ALE+V D V+W LL C
Sbjct: 326 GVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNSS-HNDSVLWRILLGSC 384
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
KI+ E A+ +L E+ + G I+LA IY V ++RKM+K + TPG
Sbjct: 385 KIHKNVTIGEIAMNRLSELGATSAGDCILLATIYAGEKDKAGVARMRKMIKSQGKKTTPG 444
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
SWIE+ +QVH+F DK+H + E+Y+ L ++
Sbjct: 445 WSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVI 478
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/389 (41%), Positives = 238/389 (61%), Gaps = 8/389 (2%)
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD-RNVVSWTAMISGYTRV 194
VH VK+G V ALV+ Y SG D+G R++FDE+ R+V++W +++GY R
Sbjct: 168 VHALAVKAGAAGDLFVRNALVHFYGVSG-DVGAMRRVFDELPRVRDVLTWNEVLAGYVRA 226
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + A +FD MP RD +W++++ G + A+ FR M V +RPNQ +V
Sbjct: 227 GMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNM---VEQGVRPNQAAVV 283
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
ALSA G+L+ GK +H V R+G+ + + AL+DMY KCG + AR FD ++
Sbjct: 284 TALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRR 343
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ +WN+MI A HG +++ +FE + + P VTF+ +LN C+ GLV +GR
Sbjct: 344 DVFAWNAMICGLAAHGLGRDAVELFERFI---SEGLSPTNVTFVGVLNGCSRSGLVAEGR 400
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
YFKL+ + YRIEP++EHYGC+VDLLGRAG EA+E+++GM I PD V+WG++L+ CK
Sbjct: 401 RYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKT 460
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+G D KLIE+DP + GY ++L+ IY + KWDEVR+VRK++ R K+ G S
Sbjct: 461 HGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWS 520
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
+E +VH+F D H + +IYD L+
Sbjct: 521 LMEAHGKVHKFLVGDTYHKDSVQIYDTLD 549
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 146/359 (40%), Gaps = 83/359 (23%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
+T AR +FD + + ++ ++ Y + A ++R+MV +G +PNQ L
Sbjct: 229 MTVAREVFDEMPVRDEISWSTLVGGYVKE-EELEVALGVFRNMVEQGV-RPNQAAVVTAL 286
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+ + K VH + +SG V ALV+ Y++ G + +AR++FD M R+V
Sbjct: 287 SAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGC-VAVAREVFDGMRRRDV 345
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
+W AMI G +GL DA+ F R
Sbjct: 346 FAWNAMI-------------------------------CGLAAHGLGRDAVELFERF--- 371
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV---YRNGLDLDSFISNALIDMYGKC 298
+S+ + P VT V L+ +G++ G+ + YR +++ + ++D+ G+
Sbjct: 372 ISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHY--GCMVDLLGRA 429
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G + EA I + E M +I PD V +
Sbjct: 430 GLVPEA-------------------------------IELIEGM------HIAPDPVLWG 452
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEP-QIEHYGCLVDLLGRAGRFEEALEVVKGM 416
++L++C GLV+ G + K ++P +Y L + +A +++E EV K M
Sbjct: 453 TILSSCKTHGLVDLG---VSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLM 508
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 39/202 (19%)
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR--LT-------- 317
LG +H + G D F+ NAL+ YG G + RR FD + R LT
Sbjct: 164 LGSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGY 223
Query: 318 ----------------------SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
SW++++ + + E ++ VF M+ + +RP+
Sbjct: 224 VRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMV---EQGVRPNQA 280
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG-CLVDLLGRAGRFEEALEVVK 414
++ L+A GL+E G+ ++ ++ P + G LVD+ + G A EV
Sbjct: 281 AVVTALSAAARLGLLEHGKFVHNVVQRSGM--PVCMNVGAALVDMYAKCGCVAVAREVFD 338
Query: 415 GMKIEPDEVVWGSLLNGCKIYG 436
GM+ D W +++ G +G
Sbjct: 339 GMR-RRDVFAWNAMICGLAAHG 359
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 265/445 (59%), Gaps = 9/445 (2%)
Query: 83 MITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVK 142
MI A+A P + ++ ++ MVR PN++ + V K+C + L + + +K
Sbjct: 1 MIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIK 60
Query: 143 SGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAAS 202
G E V A++ Y+ G + AR++FD D+++ SW MI GY G+I A
Sbjct: 61 IGLESNLFVTNAMIRMYANWGL-VDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKE 119
Query: 203 LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGH 262
+FD M +RDV +W ++IAG Q G F +A+ F M + PN+ TL AL+A +
Sbjct: 120 MFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEM---LQTGPPPNEFTLASALAACAN 176
Query: 263 TGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF--DRNSKKRLTSWN 320
L G+ IH Y+ ++ + ++ + +L+DMY KCG + A + F + K ++ WN
Sbjct: 177 LVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWN 236
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
+MI +A+HG+S+ +I +FE+M + + P+ VTF++LLNAC+HG LVE+GR YFK M
Sbjct: 237 AMIGGYAMHGKSKEAIDLFEQM---KVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSM 293
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+Y IEP+IEHYGC+VDLLGR+G +EA E V M + PD +WG+LL C+I+ +
Sbjct: 294 ASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIER 353
Query: 441 AEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDK 500
+ K + E+D ++ G ++LAN+Y G+WDE + VR+ ++ KTPGCS IE++
Sbjct: 354 GQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNG 413
Query: 501 QVHQFHSLDKTHPRTEEIYDALESM 525
HQF D++HP+T+++Y L+ M
Sbjct: 414 VFHQFLVGDRSHPQTKQLYLFLDEM 438
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/459 (37%), Positives = 263/459 (57%), Gaps = 17/459 (3%)
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
PN +T++++++A H + L+ M RG + + VL D+ K
Sbjct: 234 PNLVTWTSLLSSHARCGQHVET-MELFGRMRMRGIGATAEALAV-VLSVSVDLAAFDEGK 291
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
++H +VK GFE Y V+ +L+ Y + GN + AR LF E+ +N+VSW A+IS Y +
Sbjct: 292 VIHGYVVKGGFENYLFVKNSLICLYGKHGN-VNAARILFLEIKTKNIVSWNALISSYADL 350
Query: 195 GDIKNAASLFDSMPDRD--------VPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
G A ++F + D V +W++VI G G +A+ FRRM + +
Sbjct: 351 GWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLA---KV 407
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
+ N VT+ LS L LG+ IHG+V R+ +D + + N LI+MY K GS KE
Sbjct: 408 KANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNL 467
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F++ K L SWN+M+ + +HG EN+I F++M++ PDGVTF+++L+AC+H
Sbjct: 468 VFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIK---DGFEPDGVTFVAVLSACSH 524
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GLV +GR F M K +R+EPQ+EHY C+VDLLGRAG +EA +VVK M +EP+ VWG
Sbjct: 525 AGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWG 584
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+LLN C+++ T+ AE ++ ++ G ++L+NIY G+W++ KVR K +
Sbjct: 585 ALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKG 644
Query: 487 AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
KTPG SWI+V K+V+ F + + H EE+Y L+ +
Sbjct: 645 LKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDL 683
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 180/372 (48%), Gaps = 19/372 (5%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP--- 75
+L++C+ + +Q+ S + G ++ F A ++V ++ A+ +F+ +P
Sbjct: 40 LLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYA-GFGLVSDAQRVFE--VSPIEC 96
Query: 76 --NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
N L+ +++ A + + A +Y M + G + F +P V+++C + +
Sbjct: 97 FSNLLLWNSILRANVAH-GYCEEALEIYCRMRKLG-VSADGFTFPLVIRACALMGSRKLC 154
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+ VH +V+ GF+ V L+ Y + G + ARK+F+ M+ R+ VSW M+SGY
Sbjct: 155 RSVHGHVVEMGFQWNLHVGNELMGMYGKIGR-MDDARKVFERMAVRSCVSWNTMVSGYAL 213
Query: 194 VGDIKNAASLFDSMP----DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
D A+ +F M + ++ W S+++ + G + + F RM M I
Sbjct: 214 NYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMR---GIGAT 270
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
L LS GKVIHGYV + G + F+ N+LI +YGK G++ AR F
Sbjct: 271 AEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFL 330
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN-IRPDGVTFISLLNACTHGG 368
K + SWN++I+S+A G + + +F ++ + ++ +RP+ V++ +++ G
Sbjct: 331 EIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKG 390
Query: 369 LVEQGRAYFKLM 380
E+ F+ M
Sbjct: 391 QGEEALELFRRM 402
>gi|115470713|ref|NP_001058955.1| Os07g0163900 [Oryza sativa Japonica Group]
gi|113610491|dbj|BAF20869.1| Os07g0163900 [Oryza sativa Japonica Group]
Length = 664
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/389 (41%), Positives = 238/389 (61%), Gaps = 8/389 (2%)
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD-RNVVSWTAMISGYTRV 194
VH VK+G V ALV+ Y SG D+G R++FDE+ R+V++W +++GY R
Sbjct: 168 VHALAVKAGAAGDLFVRNALVHFYGVSG-DVGAMRRVFDELPRVRDVLTWNEVLAGYVRA 226
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + A +FD MP RD +W++++ G + A+ FR M V +RPNQ +V
Sbjct: 227 GMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNM---VEQGVRPNQAAVV 283
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
ALSA G+L+ GK +H V R+G+ + + AL+DMY KCG + AR FD ++
Sbjct: 284 TALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRR 343
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ +WN+MI A HG +++ +FE + + P VTF+ +LN C+ GLV +GR
Sbjct: 344 DVFAWNAMICGLAAHGLGRDAVELFERFI---SEGLSPTNVTFVGVLNGCSRSGLVAEGR 400
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
YFKL+ + YRIEP++EHYGC+VDLLGRAG EA+E+++GM I PD V+WG++L+ CK
Sbjct: 401 RYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKT 460
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+G D KLIE+DP + GY ++L+ IY + KWDEVR+VRK++ R K+ G S
Sbjct: 461 HGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWS 520
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
+E +VH+F D H + +IYD L+
Sbjct: 521 LMEAHGKVHKFLVGDTYHKDSVQIYDTLD 549
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 146/359 (40%), Gaps = 83/359 (23%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
+T AR +FD + + ++ ++ Y + A ++R+MV +G +PNQ L
Sbjct: 229 MTVAREVFDEMPVRDEISWSTLVGGYVKE-EELEVALGVFRNMVEQGV-RPNQAAVVTAL 286
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+ + K VH + +SG V ALV+ Y++ G + +AR++FD M R+V
Sbjct: 287 SAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGC-VAVAREVFDGMRRRDV 345
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
+W AM I G +GL DA+ F R
Sbjct: 346 FAWNAM-------------------------------ICGLAAHGLGRDAVELFERF--- 371
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV---YRNGLDLDSFISNALIDMYGKC 298
+S+ + P VT V L+ +G++ G+ + YR +++ + ++D+ G+
Sbjct: 372 ISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHY--GCMVDLLGRA 429
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G + EA I + E M +I PD V +
Sbjct: 430 GLVPEA-------------------------------IELIEGM------HIAPDPVLWG 452
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEP-QIEHYGCLVDLLGRAGRFEEALEVVKGM 416
++L++C GLV+ G + K ++P +Y L + +A +++E EV K M
Sbjct: 453 TILSSCKTHGLVDLG---VSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLM 508
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 39/202 (19%)
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR--LT-------- 317
LG +H + G D F+ NAL+ YG G + RR FD + R LT
Sbjct: 164 LGSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGY 223
Query: 318 ----------------------SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
SW++++ + + E ++ VF M+ + +RP+
Sbjct: 224 VRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMV---EQGVRPNQA 280
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG-CLVDLLGRAGRFEEALEVVK 414
++ L+A GL+E G+ ++ ++ P + G LVD+ + G A EV
Sbjct: 281 AVVTALSAAARLGLLEHGKFVHNVVQRSGM--PVCMNVGAALVDMYAKCGCVAVAREVFD 338
Query: 415 GMKIEPDEVVWGSLLNGCKIYG 436
GM+ D W +++ G +G
Sbjct: 339 GMR-RRDVFAWNAMICGLAAHG 359
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 285/512 (55%), Gaps = 11/512 (2%)
Query: 17 LAILERCNHINHLKQLQSFLTTLG-QSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+++L C + +KQ+ + L G + +F+ + +NL YA + +H P
Sbjct: 13 ISLLNSCTTLKEMKQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLDYANKLLNHNNNP 72
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQ--PNQFIYPHVLKSCPDVLESRGT 133
+ +MI AY S+ + S +F Y +++ P+ + + ++++C +
Sbjct: 73 TLFTLNSMIRAY-SKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTG 131
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
VH ++K GFE P V+T LV Y+ G + +FD + ++V+ TAM++ +
Sbjct: 132 LCVHGAVIKHGFELDPHVQTGLVFMYAELGC-LSSCHNVFDGAVEPDLVTQTAMLNACAK 190
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
GDI A +FD MP+RD WN++IAG Q G +A+ F M ME ++ N+V++
Sbjct: 191 CGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQME---GVKLNEVSM 247
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
V LSA H +L G+ +H YV R + + + AL+DMY KCG++ A + F +
Sbjct: 248 VLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKE 307
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ + +W+S I A++G E S+ +F +M R ++P+G+TFIS+L C+ GLVE+G
Sbjct: 308 RNVYTWSSAIGGLAMNGFGEESLDLFNDMKR---EGVQPNGITFISVLKGCSVVGLVEEG 364
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
R +F M Y I PQ+EHYG +VD+ GRAGR +EAL + M + P W +LL+ C+
Sbjct: 365 RKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACR 424
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
+Y + E A +K++E++ N G ++L+NIY + W+ V +R+ +K + K PGC
Sbjct: 425 MYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGC 484
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
S IEVD +VH+F DK+HPR +EI LE +
Sbjct: 485 SVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEI 516
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 177/514 (34%), Positives = 289/514 (56%), Gaps = 45/514 (8%)
Query: 18 AILERC---NHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
++L+ C +N KQL + LG + A KLV + ++L AR +FD +
Sbjct: 52 SLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVS-NSLLNARNLFDKIPK 110
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
N +L+ +I YA H +A LY M+ G +P+ F P VLK+C + +
Sbjct: 111 QNLFLWNVLIRGYAWNGPH-DNAIILYHKMLDYGL-RPDNFTLPFVLKACSALSAIGEGR 168
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H ++KSG+E R++ A+I Y +
Sbjct: 169 SIHEYVIKSGWE--------------------------------RDLFVGAALIDMYAKC 196
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + +A +FD + RD WNS++A QNG ++IS R M ++ +RP + TLV
Sbjct: 197 GCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMA---ANGVRPTEATLV 253
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
+S+ L G+ IHG+ +R+G + + ALIDMY KCGS+K A F+R +K
Sbjct: 254 TVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREK 313
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
R+ SWN++I +A+HG + ++ +F++M R +D RPD +TF+ +L AC+ G L+++GR
Sbjct: 314 RVVSWNAIITGYAMHGLAVGALDLFDKM-RKED---RPDHITFVGVLAACSRGRLLDEGR 369
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
A + LM + Y I P ++HY C++DLLG G+ +EA ++++ M ++PD VWG+LLN CKI
Sbjct: 370 ALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKI 429
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+G + AE A++KLIE++P++ G ++LAN+Y + GKW+ V K+R+++ D+ K CS
Sbjct: 430 HGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACS 489
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
WIEV +V+ F + D +H ++ IY L+ + L
Sbjct: 490 WIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGL 523
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 21/224 (9%)
Query: 227 LFSDAISFFRRMGMEVSDNIR--PNQVTLVCALSAIGHTGMLQL---------GKVIHGY 275
LF + SF+ + + ++ P Q T + G+T +LQ GK +H
Sbjct: 18 LFPFSQSFYHSLATHQTASVDSFPPQPT-----THYGYTSLLQSCIDSKALNPGKQLHAQ 72
Query: 276 VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
Y G+ + ++ L+ +Y SL AR FD+ K+ L WN +I +A +G +N+
Sbjct: 73 FYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNA 132
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
I ++ +M+ D+ +RPD T +L AC+ + +GR+ + + K+ E +
Sbjct: 133 IILYHKML---DYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKS-GWERDLFVGAA 188
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
L+D+ + G +A V + + D V+W S+L G D
Sbjct: 189 LIDMYAKCGCVMDAGRVFDKIVVR-DAVLWNSMLAAYAQNGHPD 231
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/459 (37%), Positives = 263/459 (57%), Gaps = 17/459 (3%)
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
PN +T++++++A H + L+ M RG + + VL D+ K
Sbjct: 1072 PNLVTWTSLLSSHARCGQHVET-MELFGRMRMRGIGATAEAL-AVVLSVSVDLAAFDEGK 1129
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
++H +VK GFE Y V+ +L+ Y + GN + AR LF E+ +N+VSW A+IS Y +
Sbjct: 1130 VIHGYVVKGGFENYLFVKNSLICLYGKHGN-VNAARILFLEIKTKNIVSWNALISSYADL 1188
Query: 195 GDIKNAASLFDSMPDRD--------VPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
G A ++F + D V +W++VI G G +A+ FRRM + +
Sbjct: 1189 GWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLA---KV 1245
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
+ N VT+ LS L LG+ IHG+V R+ +D + + N LI+MY K GS KE
Sbjct: 1246 KANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNL 1305
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F++ K L SWN+M+ + +HG EN+I F++M++ PDGVTF+++L+AC+H
Sbjct: 1306 VFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIK---DGFEPDGVTFVAVLSACSH 1362
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GLV +GR F M K +R+EPQ+EHY C+VDLLGRAG +EA +VVK M +EP+ VWG
Sbjct: 1363 AGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWG 1422
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+LLN C+++ T+ AE ++ ++ G ++L+NIY G+W++ KVR K +
Sbjct: 1423 ALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKG 1482
Query: 487 AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
KTPG SWI+V K+V+ F + + H EE+Y L+ +
Sbjct: 1483 LKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDL 1521
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 180/372 (48%), Gaps = 19/372 (5%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP--- 75
+L++C+ + +Q+ S + G ++ F A ++V ++ A+ +F+ +P
Sbjct: 878 LLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYA-GFGLVSDAQRVFE--VSPIEC 934
Query: 76 --NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
N L+ +++ A + + A +Y M + G + F +P V+++C + +
Sbjct: 935 FSNLLLWNSILRANVAH-GYCEEALEIYCRMRKLGV-SADGFTFPLVIRACALMGSRKLC 992
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+ VH +V+ GF+ V L+ Y + G + ARK+F+ M+ R+ VSW M+SGY
Sbjct: 993 RSVHGHVVEMGFQWNLHVGNELMGMYGKIGR-MDDARKVFERMAVRSCVSWNTMVSGYAL 1051
Query: 194 VGDIKNAASLFDSMP----DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
D A+ +F M + ++ W S+++ + G + + F RM M I
Sbjct: 1052 NYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMR---GIGAT 1108
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
L LS GKVIHGYV + G + F+ N+LI +YGK G++ AR F
Sbjct: 1109 AEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFL 1168
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN-IRPDGVTFISLLNACTHGG 368
K + SWN++I+S+A G + + +F ++ + ++ +RP+ V++ +++ G
Sbjct: 1169 EIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKG 1228
Query: 369 LVEQGRAYFKLM 380
E+ F+ M
Sbjct: 1229 QGEEALELFRRM 1240
>gi|242082594|ref|XP_002441722.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
gi|241942415|gb|EES15560.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
Length = 528
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/519 (34%), Positives = 285/519 (54%), Gaps = 14/519 (2%)
Query: 8 LNQTLNQQVLAILERCNHINHLKQLQSFLTTLG-QSQTNFYAFKLVRFCTLKLSNLTYAR 66
+N+++ +LA +C + L+++ + G + K+ R C + AR
Sbjct: 12 MNRSVCHHLLA---QCKKLRELQRIHALAIAHGLHPHQQSVSCKIFR-CYADFGRVADAR 67
Query: 67 FIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPD 126
+FD + P+ +T++++ + Q + A SL+ +V G +P+ F L +
Sbjct: 68 KLFDEIPNPDLISFTSLMSLHL-QLDNQREAISLFARVVAAGH-RPDGFAVVGALSASSG 125
Query: 127 VLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
+ + VH I + G + VV AL++ YS+ G A K+FD MS ++ V+W +
Sbjct: 126 AGDQVVGRAVHGLIFRLGLDGEVVVGNALIDMYSQCGK-FESAVKVFDRMSLKDEVTWGS 184
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
M+ GY + + +A S FD +P R V AW ++I G Q A+ F RM +E
Sbjct: 185 MLHGYIKCAGVDSALSFFDQVPVRSVVAWTALITGHVQGRQPVRALELFGRMVLE---GH 241
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
RP VT+V LSA G L LG+VIHGY + L+ +SNAL+DMY K G ++ A
Sbjct: 242 RPTHVTIVGVLSACADIGALDLGRVIHGYGSKCNASLNIIVSNALMDMYAKSGHIEMAFS 301
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F K +W +MI+ + G + ++ +F++M+R + P+ VTF+S+L+AC+H
Sbjct: 302 VFQEVQSKDSFTWTTMISCCTVQGDGKKALELFQDMLRA---GVVPNSVTFVSVLSACSH 358
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GL+E+G F M + Y+I+P +EHYGC++DLLGR G EEA ++ M +EPD V+W
Sbjct: 359 SGLIEEGIELFDRMRQLYKIDPLLEHYGCMIDLLGRGGLLEEAEALIADMNVEPDIVIWR 418
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
SLL+ C + G AE A K++++ +P + G ++L N+Y KW E R++R+ +
Sbjct: 419 SLLSACLVRGNNRLAEIAGKEIVKREPGDDGVYVLLWNMYASSNKWREAREMRQQMLSLK 478
Query: 487 AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+K PGCSWIE+D VH+F DKTH EIY+ LE M
Sbjct: 479 IFKKPGCSWIEIDGAVHEFLVEDKTHDARREIYETLEYM 517
>gi|414878289|tpg|DAA55420.1| TPA: hypothetical protein ZEAMMB73_457942 [Zea mays]
Length = 534
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 174/500 (34%), Positives = 270/500 (54%), Gaps = 45/500 (9%)
Query: 64 YARFIFDHL---TTPNTYLYTAMITAYA----SQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+AR +FD+ N YL+TA I AYA S P+ A A +L+R M+R G P+PN F
Sbjct: 37 HARAVFDNAVPTACENVYLWTATIAAYARHASSSPSVAEGALTLFRLMLRHGVPRPNAFT 96
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
V++ C + R VH +V +G + V ALV+ Y G + AR++FDEM
Sbjct: 97 ASSVVRCCSALRAVRVGIQVHGFLVNAGLGRAEHVRAALVDMYGNHGR-VADARRVFDEM 155
Query: 177 S-------------------------------DRNVVSWTAMISGYTRVGDIKNAASLFD 205
S +R+++SW ++ GY R G A LF+
Sbjct: 156 SATSVVLGNTMVACYVRAGDVESGRVVFDRMVERDLISWNTLMMGYLRQGGAGVARELFE 215
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
MPDR+V +WN IA +Q ++DA++ F RM + +P+ T+ +SA G
Sbjct: 216 EMPDRNVNSWNMAIAAYSQERSWADAVAVFNRMRLA---RFQPDPATMAVLMSACAQLGS 272
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L + + +HG + + ++++ + N+LIDMY KCGS+ +A F K S+N MI +
Sbjct: 273 LSVARQVHGILRKGCVEMNFHVLNSLIDMYAKCGSISQAHLLFVETHLKDTVSYNVMICA 332
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
A HG +++ VF+EM + ++PD VT + +L+AC H GLV G+ YF+ M Y
Sbjct: 333 LARHGHGRDALQVFDEMSK---ERLQPDAVTLLGVLSACAHAGLVHDGKFYFESMKTNYA 389
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
IE +HY C+VDL GRAG +EA E+ + M +EP VWG+L+N C+ + + + A
Sbjct: 390 IEQSPDHYACMVDLYGRAGLIKEAYELARAMPMEPHAGVWGALINACRKHCNVEVGKVAA 449
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
++LI I+P N G ++LAN +W+ V V + ++ + KT GCSW+EV+ VH+F
Sbjct: 450 RELIAIEPRNPGTYVLLANTLARGQQWEFVETVWQSMRGKGIEKTAGCSWLEVENVVHEF 509
Query: 506 HSLDKTHPRTEEIYDALESM 525
+ +HP ++EIY LE +
Sbjct: 510 LMGESSHPNSDEIYSILEHL 529
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 165/528 (31%), Positives = 294/528 (55%), Gaps = 39/528 (7%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDHLTTPNTYLYTAMI 84
+ +L QL + + G Q ++ + L++ + SN +A +F + PN +++ +I
Sbjct: 46 LQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVI 105
Query: 85 TAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG 144
+ A Y MV +PN+F YP + K+C + + +H +VK G
Sbjct: 106 KG-CLENNKLFKAIYFYGRMVI--DARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHG 162
Query: 145 FEQYPVVETALVNSYSRSG-------------NDI-------------GI---ARKLFDE 175
+++A + Y+ G +D+ G+ A+ LF +
Sbjct: 163 IGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQ 222
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
M +N+ SW MI+G + G++ +A LFD M +RD +W+S++ G G + +A+ F
Sbjct: 223 MPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIF 282
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
++M E RP + L L+A + G + G+ +H Y+ RN + LD+ + AL+DMY
Sbjct: 283 QQMQRE---ETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMY 339
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCG L F+ ++ + +WN+MI A+HG++E+++ +F ++ Q+ ++P+G+
Sbjct: 340 AKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKL---QEGRMKPNGI 396
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
T + +L AC H G V++G F+ M + Y ++P++EHYGC+VDLLGR+G F EA +++
Sbjct: 397 TLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINS 456
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M ++P+ VWG+LL C+I+G D AE K L+E++P N G ++L+NIY ++G++D+V
Sbjct: 457 MPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDV 516
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K+RK++K+R PG S ++++ VH+F D +HP+ +EIY L+
Sbjct: 517 SKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLK 564
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 185/501 (36%), Positives = 286/501 (57%), Gaps = 26/501 (5%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTPNTYLYTAMITAY 87
LKQL + + Q + A +L+RF + +L YAR IF + PN + Y +I A
Sbjct: 4 LKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRAL 63
Query: 88 ASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQ 147
S+ A ++ +MV +PN F +P V K+C R + VH VK G +
Sbjct: 64 -SESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDS 122
Query: 148 YPVVETALVNSYSRSGNDIGIARKLF---------DEMSDR------NVVSWTAMISGYT 192
V + +V Y G + A +LF D + D+ +VV W MI GY
Sbjct: 123 DEFVVSNVVRMYLSCGV-MEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYV 181
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
R+G+++ A +LFD MP R V +WN +IAG Q+G F +A+ FR M M + PN VT
Sbjct: 182 RIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMA---EVPPNYVT 238
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
LV L A+ G L+LGK +H Y RN + +D + +ALIDMY KCGS+++A + F+
Sbjct: 239 LVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLP 298
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
K+ + +W+++I A+HG++++++ FE+M R + P VT+I LL+AC+H GLV +
Sbjct: 299 KRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERA---GVMPSDVTYIGLLSACSHAGLVNE 355
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
GR +F M + +EP+IEHYGC+VDLLGRAG EE+ E++ M I+PD+V+W +LL C
Sbjct: 356 GRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGAC 415
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK--DRNAYKT 490
K++G + + + L+E+ P++ G + L+NIY LG W+ V KVR M+K D +A
Sbjct: 416 KMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVSARWH 475
Query: 491 PGCSWIEVDKQVHQFHSLDKT 511
P + ++ ++ +FH +T
Sbjct: 476 PEDACXDMLEEAPEFHQTKET 496
>gi|356513796|ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 595
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 283/548 (51%), Gaps = 65/548 (11%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
++ + A LE +++ L Q+ S L G SQ +A ++ A F+FDHL
Sbjct: 7 HEVLFAALESWKNLHELNQVLSQLIVSGLSQHPLFATSAIKKLCSHSVTFPRATFLFDHL 66
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
P+ + +I AYA +P ++ Y M+ R P PN + +P ++K C D+ R
Sbjct: 67 HHPDAFHCNTIIRAYARKPDFPAALRFYYCKMLARSVP-PNHYTFPLLIKVCTDIGSFRE 125
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYS---RSGN------------------------- 164
H +IVK GF +L+ YS R GN
Sbjct: 126 GLKGHARIVKFGFGSDLFARNSLIRMYSVFGRIGNARMVFDESCWLDLVSYNSMIDGYVK 185
Query: 165 --DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC 222
+IG ARK+F+EM DR+V+SW +I+GY VGD+ A LF+++P+RD +WN +I GC
Sbjct: 186 NGEIGAARKVFNEMPDRDVLSWNCLIAGYVGVGDLDAANELFETIPERDAVSWNCMIDGC 245
Query: 223 TQNGLFSDAISFFRRMGMEVSDNIR-------------------------------PNQV 251
+ G S A+ FF RM V + + PN+
Sbjct: 246 ARVGNVSLAVKFFDRMPAAVRNVVSWNSVLALHARVKNYGECLMLFGKMVEGREAVPNEA 305
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
TLV L+A + G L +G +H ++ N + D + L+ MY KCG++ A+ FD
Sbjct: 306 TLVSVLTACANLGKLSMGMWVHSFIRSNNIKPDVLLLTCLLTMYAKCGAMDLAKGVFDEM 365
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
+ + SWNSMI + LHG + ++ +F EM + +P+ TFIS+L+ACTH G+V
Sbjct: 366 PVRSVVSWNSMIMGYGLHGIGDKALELFLEMEKAGQ---QPNDATFISVLSACTHAGMVM 422
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G YF LM + Y+IEP++EHYGC+VDLL RAG E + E+++ + ++ +WG+LL+G
Sbjct: 423 EGWWYFDLMQRVYKIEPKVEHYGCMVDLLARAGLVENSEELIRMVPVKAGSAIWGALLSG 482
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C + ++ E K+ IE++P + G I+L+N+Y G+WD+V VR M+K++ K
Sbjct: 483 CSNHLDSELGEIVAKRFIELEPQDIGPYILLSNMYAAKGRWDDVEHVRLMIKEKGLQKEA 542
Query: 492 GCSWIEVD 499
S + ++
Sbjct: 543 ASSLVHLE 550
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 170/459 (37%), Positives = 263/459 (57%), Gaps = 17/459 (3%)
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
PN +T++++++A H + L+ M RG + + VL D+ K
Sbjct: 234 PNLVTWTSLLSSHARCGQHVET-MELFGRMRMRGIGATAEAL-AVVLSVSVDLAAFDEGK 291
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
++H +VK GFE Y V+ +L+ Y + GN + AR LF E+ +N+VSW A+IS Y +
Sbjct: 292 VIHGYVVKGGFENYLFVKNSLICLYGKHGN-VNAARILFLEIKTKNIVSWNALISSYADL 350
Query: 195 GDIKNAASLFDSMPDRD--------VPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
G A ++F + D V +W++VI G G +A+ FRRM + +
Sbjct: 351 GWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLA---KV 407
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
+ N VT+ LS L LG+ IHG+V R+ +D + + N LI+MY K GS KE
Sbjct: 408 KANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNL 467
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F++ K L SWN+M+ + +HG EN+I F++M++ PDGVTF+++L+AC+H
Sbjct: 468 VFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIK---DGFEPDGVTFVAVLSACSH 524
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GLV +GR F M K +R+EPQ+EHY C+VDLLGRAG +EA +VVK M +EP+ VWG
Sbjct: 525 AGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWG 584
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+LLN C+++ T+ AE ++ ++ G ++L+NIY G+W++ KVR K +
Sbjct: 585 ALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKG 644
Query: 487 AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
KTPG SWI+V K+V+ F + + H EE+Y L+ +
Sbjct: 645 LKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDL 683
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 180/372 (48%), Gaps = 19/372 (5%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP--- 75
+L++C+ + +Q+ S + G ++ F A ++V ++ A+ +F+ +P
Sbjct: 40 LLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYA-GFGLVSDAQRVFE--VSPIEC 96
Query: 76 --NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
N L+ +++ A + + A +Y M + G + F +P V+++C + +
Sbjct: 97 FSNLLLWNSILRANVAH-GYCEEALEIYCRMRKLG-VSADGFTFPLVIRACALMGSRKLC 154
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+ VH +V+ GF+ V L+ Y + G + ARK+F+ M+ R+ VSW M+SGY
Sbjct: 155 RSVHGHVVEMGFQWNLHVGNELMGMYGKIGR-MDDARKVFERMAVRSCVSWNTMVSGYAL 213
Query: 194 VGDIKNAASLFDSMP----DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
D A+ +F M + ++ W S+++ + G + + F RM M I
Sbjct: 214 NYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMR---GIGAT 270
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
L LS GKVIHGYV + G + F+ N+LI +YGK G++ AR F
Sbjct: 271 AEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFL 330
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN-IRPDGVTFISLLNACTHGG 368
K + SWN++I+S+A G + + +F ++ + ++ +RP+ V++ +++ G
Sbjct: 331 EIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKG 390
Query: 369 LVEQGRAYFKLM 380
E+ F+ M
Sbjct: 391 QGEEALELFRRM 402
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 195/569 (34%), Positives = 297/569 (52%), Gaps = 67/569 (11%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYL 79
L +C + NH+KQ+ + L Q + A KL+ +L +NL+ A +F+ + PN +L
Sbjct: 29 LHKCTNPNHIKQIHAQLIKCHLHQDPYIAPKLIASYSLT-NNLSSAVNVFNQVPDPNVHL 87
Query: 80 YTAMITAYASQPAHASS--AFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG-TKMV 136
Y +I AY+ ++S AF + M G N F YP +LK C KMV
Sbjct: 88 YNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADN-FTYPFLLKGCNGSSSWLSLVKMV 146
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGN------------------------------DI 166
H + K GF V +L++ Y R G+ D+
Sbjct: 147 HAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDL 206
Query: 167 GIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNG 226
A K+FDEM +R+ VSW M+ G+T+ G++ A LF+ M +RD+ +W++++ G ++NG
Sbjct: 207 DGALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNG 266
Query: 227 ------------------LFSDAISFFRRMG-----MEVSDNIRPNQVTL-----VCALS 258
L++ IS + G M + D + + + L + L+
Sbjct: 267 DMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILA 326
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD-RNSKKRLT 317
A +GML LGK +H R+ + + N+ IDMY KCG + +A R F+ ++K L
Sbjct: 327 ACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLV 386
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
SWNSMI+ F +HG E SI +F M+R +PD TFI LL ACTH GLV +GR YF
Sbjct: 387 SWNSMIHGFGIHGHGEKSIELFNTMVR---EGFKPDRYTFIGLLCACTHAGLVNEGRGYF 443
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
M + Y I PQIEHYGC+VDLLGR G +EA +V+ M EP+ ++ G+LL C+++
Sbjct: 444 YSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHND 503
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
A K L ++ P++ G +L+NIY + G W V KVRK + D K G S IE
Sbjct: 504 VKLATSVSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIE 563
Query: 498 VDKQVHQFHSLDKTHPRTEEIYDALESMV 526
V+++VH+F D +HP++ +IY+ ++ +V
Sbjct: 564 VEEEVHEFTVRDWSHPKSGDIYNMIDRLV 592
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 302/528 (57%), Gaps = 15/528 (2%)
Query: 4 VTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT-LKLSNL 62
++NQ + L +++ L+ C ++N +KQ+ + G Q+ + KL+R T L +
Sbjct: 41 ISNQ-KELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMD 99
Query: 63 TYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
YAR + + + N +L+TA+I YA + A ++Y M R+ + P F + +LK
Sbjct: 100 PYARRVIEPVQFRNPFLWTAVIRGYAIE-GKFDEAIAMYGCM-RKEEITPVSFTFSALLK 157
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
+C + + + H Q + + V +++ Y + I ARK+FDEM +R+V+
Sbjct: 158 ACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKC-ESIDCARKVFDEMPERDVI 216
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
SWT +I+ Y RVG+++ AA LF+S+P +D+ AW +++ G QN +A+ +F RM
Sbjct: 217 SWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRME--- 273
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS--FISNALIDMYGKCGS 300
IR ++VT+ +SA G + ++G I +ALIDMY KCG+
Sbjct: 274 KSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGN 333
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
++EA F + K + +++SMI A HG+++ ++ +F M+ I+P+ VTF+
Sbjct: 334 VEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMV--TQTEIKPNTVTFVGA 391
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L AC+H GLV+QGR F M +T+ ++P +HY C+VDLLGR GR +EALE++K M +EP
Sbjct: 392 LMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEP 451
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
VWG+LL C+I+ + AE A + L E++P+ G I+L+N+Y G W V +VRK
Sbjct: 452 HGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRK 511
Query: 481 MLKDRNAYKTPGCSWIEVDK--QVHQFHSLDKTHPRTEEIYDALESMV 526
++K++ KTP SW+ VDK Q+H+F + HP + +I D LE +V
Sbjct: 512 LIKEKGLKKTPAVSWV-VDKNGQMHKFFPGNLNHPMSNKIQDKLEELV 558
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/387 (41%), Positives = 239/387 (61%), Gaps = 12/387 (3%)
Query: 145 FEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
FE+ P V ++ ++R G I AR+LFD+M RNVV+W AMI+ Y + + A
Sbjct: 112 FEKIPNPNTVSWVTMLCGFARFGK-IAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEA 170
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
SLF MP+++ +W +VI G + G +A R++ ++ +P+Q T C LS+
Sbjct: 171 ISLFMEMPEKNSISWTTVINGYVRMGKLDEA----RQLLNQMPYRNKPDQSTFACGLSSC 226
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
H LQ+GK +H V ++G D F+SNALI MY KCGS+ A F + SWN
Sbjct: 227 AHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWN 286
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
S+I ++AL+G ++ +F +M + + PD VTF+ +L+AC+H GL++QG FK M
Sbjct: 287 SLIAAYALNGNGREALKLFHKM---EVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCM 343
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+ Y IEP EHY C+VDLLGRAGR EEA ++V+GMKI + +WG+LL C+I+G +
Sbjct: 344 VQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLEL 403
Query: 441 AEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDK 500
A+FA +KL+E +P+ ++L+N+ E G+WDEV +VR+++K++ A K PG SWIE+
Sbjct: 404 AKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQN 463
Query: 501 QVHQFHSLDKTHPRTEEIYDALESMVA 527
+VH F S D HPR E+ L S+ A
Sbjct: 464 RVHAFLSEDPAHPRAVELCHILRSLTA 490
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 133/324 (41%), Gaps = 71/324 (21%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM------------- 104
+ + AR +FD + N + AMI AY Q H A SL+ +M
Sbjct: 132 RFGKIAEARRLFDQMPIRNVVAWNAMIAAYV-QNCHVDEAISLFMEMPEKNSISWTTVIN 190
Query: 105 --VRRGQ--------------PQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQY 148
VR G+ +P+Q + L SC + + K +H ++KSG+
Sbjct: 191 GYVRMGKLDEARQLLNQMPYRNKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATD 250
Query: 149 PVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP 208
V AL+ Y++ G+ I A LF ++ +VVSW ++I+ Y G+ + A LF M
Sbjct: 251 LFVSNALITMYAKCGS-ISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKM- 308
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
EV + + P++VT V LSA H G++
Sbjct: 309 --------------------------------EV-EGVAPDEVTFVGILSACSHVGLIDQ 335
Query: 269 G-KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA---RRAFDRNSKKRLTSWNSMIN 324
G K+ V ++ + ++D+ G+ G L+EA R N+ + W +++
Sbjct: 336 GLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGI--WGALLG 393
Query: 325 SFALHGQSENSICVFEEMMRCQDH 348
+ +HG E + E+++ + H
Sbjct: 394 ACRIHGNLELAKFAAEKLLEFEPH 417
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 180/512 (35%), Positives = 281/512 (54%), Gaps = 45/512 (8%)
Query: 17 LAILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
++IL C+ + LK Q+Q + G + L+ K +L A +F+ ++
Sbjct: 417 MSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYA-KCGSLKDAHRVFEKIS 475
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
N + AMITAY Q +A + ++ +++ G +PN + +L C
Sbjct: 476 KQNVVAWNAMITAYV-QHEQYDNALATFQALLKEG-IKPNSSTFTSILNVCKSSDSLELG 533
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
K VH I+K+G E SD +V + A++S +
Sbjct: 534 KWVHFLIMKAGLE------------------------------SDLHVSN--ALVSMFVN 561
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
GD+ +A +LF+ MP RD+ +WN++IAG Q+G A +F+ M I+P+++T
Sbjct: 562 CGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQ---ESGIKPDKITF 618
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
L+A L G+ +H + D D + LI MY KCGS+++A + F + K
Sbjct: 619 TGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPK 678
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K + SW SMI +A HG+ + ++ +F +M Q ++PD +TF+ L+AC H GL+E+G
Sbjct: 679 KNVYSWTSMITGYAQHGRGKEALELFYQM---QQEGVKPDWITFVGALSACAHAGLIEEG 735
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
+F+ M K + IEP++EHYGC+VDL GRAG EA+E + M++EPD VWG+LL C+
Sbjct: 736 LHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQ 794
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
++ + AE A +K +E+DPN+ G ++L+NIY G W EV K+RK++ DR K PG
Sbjct: 795 VHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQ 854
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
SWIEVD +VH F+S DKTHP+TEEI+ LE +
Sbjct: 855 SWIEVDGKVHTFYSDDKTHPQTEEIHAELERL 886
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 219/503 (43%), Gaps = 81/503 (16%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQS--QTNFYAFKLVRFCTLKLSNLTYARF 67
Q Q A+L+ C +L + + +S Q + + + + K N A+
Sbjct: 107 QIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQ 166
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
IFD + + Y + ++ Y Q AF L+ MV+ +P++ + +L +C D
Sbjct: 167 IFDDMREKDVYSWNLLLGGYV-QHGLYEEAFKLHEQMVQ-DSVKPDKRTFVSMLNACADA 224
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN--------------DI------- 166
+ ++ I+K+G++ V TAL+N + + G+ D+
Sbjct: 225 RNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMI 284
Query: 167 -GIAR--------KLFDEMSDRNV--------------------------------VSW- 184
G+AR LF M + V V W
Sbjct: 285 TGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWD 344
Query: 185 ------TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
TA++S YT+ G +++A +FD + R+V +W ++IAG Q+G +A FF +M
Sbjct: 345 TEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKM 404
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
+ I PN+VT + L A L+ G+ I ++ G D + AL+ MY KC
Sbjct: 405 ---IESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKC 461
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
GSLK+A R F++ SK+ + +WN+MI ++ H Q +N++ F+ +++ I+P+ TF
Sbjct: 462 GSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLK---EGIKPNSSTFT 518
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
S+LN C +E G+ L+ K +E + LV + G A + M
Sbjct: 519 SILNVCKSSDSLELGKWVHFLIMKA-GLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP- 576
Query: 419 EPDEVVWGSLLNGCKIYGRTDFA 441
+ D V W +++ G +G+ A
Sbjct: 577 KRDLVSWNTIIAGFVQHGKNQVA 599
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 191/590 (32%), Positives = 301/590 (51%), Gaps = 88/590 (14%)
Query: 11 TLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFD 70
TL +L +C +HLKQ S L T G + F+ ++R T +L Y +FD
Sbjct: 6 TLRHSILCCFHKCGTFDHLKQTTSILITSGLAHHTFFLSDILRSAT---KDLGYTLLLFD 62
Query: 71 HLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
L TP +L+ +I ++ SQP A+S +R P++ +P +LK+ L
Sbjct: 63 RLATPYIFLWNTIIRGFSASSQPQMVLVAYS----RLRNHGVIPDRHTFPLLLKAFSK-L 117
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVE-------------------------------TALVN 157
+ + IVK G + V+ TAL+N
Sbjct: 118 RNENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALIN 177
Query: 158 SYSRSGNDIGIARKLFDEMSDRNV-----------------------------------V 182
R+G + A + F EM V V
Sbjct: 178 GCLRNGRAVE-ALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRV 236
Query: 183 SW-----TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
W +A++ Y++ G +A +F+ MP R++ +W ++IAG Q + +A+ F+
Sbjct: 237 IWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQE 296
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M +E I PNQ T+ AL+A G L G+ +H YV R+ L L+S + AL+DMY K
Sbjct: 297 MIIE---GIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSK 353
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG + EA F++ K + W +MIN A+ G + +S+ +F +M+R + ++P+GVTF
Sbjct: 354 CGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSR---VQPNGVTF 410
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+ +L+AC HGGLV++G F+LM YR+EP ++HYGC+VDLLGRAGR EEA++ ++ M
Sbjct: 411 LGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMP 470
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+EP VWG+L +GC I+ + E LI++ P++ G I+LAN+Y KW+
Sbjct: 471 MEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAAN 530
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
VR+++K + K+PGCSWIEV+ +H+F + DK+H + +Y LES+ A
Sbjct: 531 VRRLMKGKGVDKSPGCSWIEVNGVIHEFIAFDKSHTESINVYMMLESVSA 580
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 168/461 (36%), Positives = 268/461 (58%), Gaps = 11/461 (2%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ F+ + + + AMI+ Y +Q A ++ M+ +P++F L +C
Sbjct: 230 AQVQFEQMIERDVVSWNAMISGY-NQHGFDREALDIFSKMLMDSSSKPDKFTLASALSAC 288
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE--MSDRNVV 182
++ + K +H I+++ F+ + V AL++ YS+SG + IA+K+ ++ +S+ +V+
Sbjct: 289 ANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGG-VEIAQKIIEQSMISNLDVI 347
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
++TA++ GY ++GDI A +FDS+ RDV AW ++I G QNG DA+ FR M +
Sbjct: 348 AFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSM---I 404
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
+ +PN TL LS L G+ IH R+G +SNALI MY K GS+
Sbjct: 405 KEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSIN 464
Query: 303 EARRAFDRNSKKRLT-SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+AR F+ KR T +W SMI + A HG E ++ +FE M+ ++ I+PD +T++ +L
Sbjct: 465 DARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERML---ENGIKPDHITYVGVL 521
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
+ACTH GLVEQGR+Y+ LM ++I P HY C++DL GRAG +EA ++ M IEPD
Sbjct: 522 SACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPD 581
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
+ WGSLL CK++ + AE A ++L+ I+P N G LAN+Y G+W+ +RK
Sbjct: 582 VIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKS 641
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+KD+ K G SW+++ +VH F D HP+ + IY+ +
Sbjct: 642 MKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMM 682
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 219/454 (48%), Gaps = 47/454 (10%)
Query: 47 YAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVR 106
+++ ++ K L A +F+ + P++ +TAMI Y +Q +A ++R+MV
Sbjct: 80 FSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGY-NQMGQFENAIGMFREMVS 138
Query: 107 RGQPQPNQFIYPHVLKSCPDVLESRGT-KMVHTQIVKSGFEQYPVVETALVNSYSRSGND 165
P P QF +VL SC V E G + VH+ +VK G Y V +L+N Y++SG+
Sbjct: 139 DDVP-PTQFTLTNVLASCAAV-ECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDP 196
Query: 166 IGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQN 225
+ A+ +FD M ++ SW MIS + + G + A F+ M +RDV +WN++I+G Q+
Sbjct: 197 V-TAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQH 255
Query: 226 GLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
G +A+ F +M M+ S +P++ TL ALSA + L+LGK IH ++ R D
Sbjct: 256 GFDREALDIFSKMLMDSSS--KPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFG 313
Query: 286 FISNALIDMYGKCGSLK---------------------------------EARRAFDRNS 312
+ NALI MY K G ++ ARR FD
Sbjct: 314 AVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLR 373
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+ + +W +MI + +G +++++ +F M++ +P+ T ++L+ + ++
Sbjct: 374 VRDVVAWTAMIVGYVQNGFNQDAMELFRSMIK---EGPKPNNYTLATMLSVSSSLASLDH 430
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
GR T++ + L+ + ++G +A V + + D + W S++
Sbjct: 431 GRQIHASATRSGN-ASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIAL 489
Query: 433 KIYGRTDFAEFAVKKLIE--IDPNNGGY-GIMLA 463
+G + A ++++E I P++ Y G++ A
Sbjct: 490 AQHGLGEEALTLFERMLENGIKPDHITYVGVLSA 523
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 167/334 (50%), Gaps = 47/334 (14%)
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
K +H +I+K+G + L+N Y+++G I A ++FDEM ++V SW ++SGY +
Sbjct: 33 KSIHARIIKAGLHLGVFLMNNLMNFYAKTGF-IYDAHRVFDEMPVKSVFSWNIILSGYAK 91
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
G ++ A +F+ MP+ D +W ++I G Q G F +AI FR M VSD++ P Q TL
Sbjct: 92 GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREM---VSDDVPPTQFTL 148
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
L++ L +G+ +H +V ++GL ++N+L++MY K G A+ FDR
Sbjct: 149 TNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKL 208
Query: 314 KRLTSWNSMINS-------------------------------FALHGQSENSICVFEEM 342
K +SWN+MI+S + HG ++ +F +M
Sbjct: 209 KSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKM 268
Query: 343 MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG----CLVD 398
+ D + +PD T S L+AC + ++ G+ + +T + + +G L+
Sbjct: 269 L--MDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRT-----EFDTFGAVGNALIS 321
Query: 399 LLGRAGRFEEALEVV-KGMKIEPDEVVWGSLLNG 431
+ ++G E A +++ + M D + + +LL+G
Sbjct: 322 MYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDG 355
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 180/451 (39%), Gaps = 96/451 (21%)
Query: 42 SQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLY 101
S + AF + +KL ++ AR IFD L + +TAMI Y Q A L+
Sbjct: 342 SNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYV-QNGFNQDAMELF 400
Query: 102 RDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSR 161
R M++ G P+PN + +L + + +H +SG V AL+ Y++
Sbjct: 401 RSMIKEG-PKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAK 459
Query: 162 SGNDIGIARKLFDEMS-DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIA 220
SG+ I AR +F+ + R+ ++WT+M I
Sbjct: 460 SGS-INDARWVFNLIHWKRDTITWTSM-------------------------------II 487
Query: 221 GCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG 280
Q+GL +A++ F RM + + I+P+ +T V LSA H G+++ G+ + + +N
Sbjct: 488 ALAQHGLGEEALTLFERM---LENGIKPDHITYVGVLSACTHVGLVEQGRSYYN-LMQNA 543
Query: 281 LDLDSFISN--ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICV 338
+ S+ +ID++G+ G L+EA AF N
Sbjct: 544 HKIIPTPSHYACMIDLFGRAGLLQEA-HAFIENMP------------------------- 577
Query: 339 FEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE-HYGCLV 397
I PD + + SLL +C VE + + IEP+ Y L
Sbjct: 578 -----------IEPDVIAWGSLLASCKVHKNVELAEVAAE---RLLLIEPENSGAYSALA 623
Query: 398 DLLGRAGRFEEALEVVKGMK---IEPDE-VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDP 453
++ G++E A + K MK ++ D+ W + N I+G D + P
Sbjct: 624 NVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDD----------GLHP 673
Query: 454 NNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
M+A I+ E+ K V +L D
Sbjct: 674 QRDAIYEMMAKIWKEIKKMGFVPDTESVLHD 704
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
GK IH + + GL L F+ N L++ Y K G + +A R FD K + SWN +++ +A
Sbjct: 32 GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
G+ E + VFEEM PD V++ +++ G E F+ M
Sbjct: 92 GGRLEEAHRVFEEMP-------EPDSVSWTAMIVGYNQMGQFENAIGMFREMV 137
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 170/495 (34%), Positives = 272/495 (54%), Gaps = 18/495 (3%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
+ +L+ C + L+Q+ + + G Q +F + + C LSN +Y +F+ +
Sbjct: 73 TSSISTLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCN-SLSNFSYTTSVFNGV 131
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
++P+T L+ I Y S+ S SL+ M +R P++F YP ++K+C V +
Sbjct: 132 SSPSTVLWNTYIKGY-SENYSVSLTVSLFIRM-KRSDAVPDKFTYPSLIKACSKVCGVKE 189
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
H V+ G V T+L++ Y + G +I ARK+FDEM +RNVVSWTAMI+GY
Sbjct: 190 GVAFHGSAVRCGVGGDVFVMTSLIDLYGKCG-EILCARKVFDEMGERNVVSWTAMIAGYA 248
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM----------GMEV 242
D+ A LFD MP+++ +WN++I+G + G A F M +
Sbjct: 249 SFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNRDVVAWSALI 308
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD-SFISNALIDMYGKCGSL 301
S N++P++ +V +SA G L+L K + YV ++ +D+ + + ALIDM KCGS+
Sbjct: 309 SGNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSM 368
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
A + F+ K+ L S+ SM+ ++HG ++ +F M+ + + PD V F +L
Sbjct: 369 DRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRML---NEGLTPDDVAFTVIL 425
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
AC+ GLV++G YF+ M Y I P +HY C+VDLLGRAGR +EA E++K M +EP
Sbjct: 426 TACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPH 485
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
WG+LL CK++ + E +L E++P N G ++L+NIY +W +V +R
Sbjct: 486 AGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNK 545
Query: 482 LKDRNAYKTPGCSWI 496
+++R K PGCSWI
Sbjct: 546 MRERGIRKIPGCSWI 560
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 190/542 (35%), Positives = 290/542 (53%), Gaps = 47/542 (8%)
Query: 12 LNQQVLAILERCNHINHLKQLQS-FLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFD 70
+N +L I+ C + LK + + L + + F KL+R + + YA +FD
Sbjct: 1 MNPPILHIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYS-RFGATDYAHKVFD 59
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+T PN YL+T++I Y + AFSL+ M RR F VLK+ +
Sbjct: 60 EITQPNAYLWTSLIHGYVENRQY-DEAFSLFIQM-RREPISVLNFTISSVLKALARLTRF 117
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
+G + V+ E+ V +++ Y + + + IARK FD M +RNVVSWT+MI G
Sbjct: 118 KGGQAVYGFAFDEMCEKDIVSWNMMISGYG-NNDRVDIARKFFDRMPERNVVSWTSMICG 176
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWN--------------------------------SV 218
Y + GD+ A LFDSMP +D+ +WN ++
Sbjct: 177 YVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMKNLVTWSTM 236
Query: 219 IAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK-VIHGYVY 277
I G +NG A+ F R + +I+P++ ++ +SA G++ + +IH YV
Sbjct: 237 IGGYARNGQPLKALELFERFKEQ---DIKPDETFILGIISACSQLGIIDAAESIIHNYVG 293
Query: 278 RNGL-DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSI 336
+ L DL F S LIDMY KCGS+++A + F+ K L +++MI + A HG ++I
Sbjct: 294 PSLLSDLRVFTS--LIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAI 351
Query: 337 CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCL 396
+F++M R NI+PD VTF+ +L AC HGGLV++GR YFK MT+ + I+P +HY C+
Sbjct: 352 FLFDKMQRA---NIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACV 408
Query: 397 VDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNG 456
VDLLGR G EEA +++ M I P VVWG+LL C+++ AE A +L +I+P+N
Sbjct: 409 VDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNS 468
Query: 457 GYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTE 516
G I+L+NIY G+W V KVR +++ K G SWIE+ VH+F D +H ++
Sbjct: 469 GNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSHTDSD 528
Query: 517 EI 518
I
Sbjct: 529 SI 530
>gi|115456858|ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza sativa Japonica Group]
gi|113563600|dbj|BAF13943.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 531
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 168/474 (35%), Positives = 268/474 (56%), Gaps = 11/474 (2%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L + +AR +FD + TAM A+ + A+ A +++ DMV G P+
Sbjct: 59 LGSPDHARRLFDEMPEQGLVPRTAMARAHVAS-GQAAQAIAVFGDMVADGV-FPDNVALA 116
Query: 119 HVLKSCPDV----LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
L +C K +H IV SG E V T L+ Y G + ++R++FD
Sbjct: 117 VALGACHGAGSWTARRNPGKKIHALIVTSGIEPDVFVSTELIRVYGECGK-LAVSRRVFD 175
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
+M R+ ++W AM+ Y R G + A LF +MP RDV +WN+V+AG G +A+
Sbjct: 176 DMPSRSTITWNAMLHQYARHGKVDTAYELFLAMPRRDVVSWNTVMAGYCVAGRCREALGL 235
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
FR+M S + PN T+ L A G L+ G +H Y+ RN ++ D ++ LIDM
Sbjct: 236 FRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDM 295
Query: 295 YGKCGSLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
Y KCGS+ A + F++ +KR L SW ++I A+HG++ +++ +F+ M QD+ I PD
Sbjct: 296 YCKCGSIDNALQVFEKAPRKRDLFSWTTVICGLAMHGRATDALRMFDMM---QDNGICPD 352
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
VT + +LNAC HGGLV++G YF M +RI P+IEHYGC++DLLGR GR +EA ++
Sbjct: 353 DVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMI 412
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
+ M ++P+ V+WG+ L+ CK++G + + A ++L +DP++ +ML+++Y + W
Sbjct: 413 RTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWI 472
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+ + R+ + KTPGCS IE+ +VH+F + HP+ EI L+ + A
Sbjct: 473 GLARERREMNSMQVKKTPGCSSIELKGEVHEFVAGGSQHPQYAEICSVLQDVEA 526
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 131/289 (45%), Gaps = 39/289 (13%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
TA++S Y +G +A LFD MP++ + ++ +G + AI+ F M V+D
Sbjct: 50 TALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDM---VAD 106
Query: 245 NIRPNQVTLVCALSAIGHTGMLQL----GKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ P+ V L AL A G GK IH + +G++ D F+S LI +YG+CG
Sbjct: 107 GVFPDNVALAVALGACHGAGSWTARRNPGKKIHALIVTSGIEPDVFVSTELIRVYGECGK 166
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQ-----------------SENSI----CV- 338
L +RR FD + +WN+M++ +A HG+ S N++ CV
Sbjct: 167 LAVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYELFLAMPRRDVVSWNTVMAGYCVA 226
Query: 339 ---------FEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
F +M+ + P+ T ++L AC G +E G + + R+
Sbjct: 227 GRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETG-IWVHAYIERNRMNDD 285
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
CL+D+ + G + AL+V + + D W +++ G ++GR
Sbjct: 286 GYLDRCLIDMYCKCGSIDNALQVFEKAPRKRDLFSWTTVICGLAMHGRA 334
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 8/174 (4%)
Query: 272 IHGYVYRNGL-DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG 330
IH + + GL + + + AL+ Y GS ARR FD ++ L +M + G
Sbjct: 32 IHCLLLKAGLLHVGAHLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASG 91
Query: 331 QSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK---LMTKTYRIE 387
Q+ +I VF +M+ + PD V L AC G R K + T IE
Sbjct: 92 QAAQAIAVFGDMVA---DGVFPDNVALAVALGACHGAGSWTARRNPGKKIHALIVTSGIE 148
Query: 388 PQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
P + L+ + G G+ + V M + W ++L+ +G+ D A
Sbjct: 149 PDVFVSTELIRVYGECGKLAVSRRVFDDMPSR-STITWNAMLHQYARHGKVDTA 201
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 180/512 (35%), Positives = 281/512 (54%), Gaps = 45/512 (8%)
Query: 17 LAILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
++IL C+ + LK Q+Q + G + L+ K +L A +F+ ++
Sbjct: 417 MSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYA-KCGSLKDAHRVFEKIS 475
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
N + AMITAY Q +A + ++ +++ G +PN + +L C
Sbjct: 476 KQNVVAWNAMITAYV-QHEQYDNALATFQALLKEG-IKPNSSTFTSILNVCKSSDSLELG 533
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
K VH I+K+G E SD +V + A++S +
Sbjct: 534 KWVHFLIMKAGLE------------------------------SDLHVSN--ALVSMFVN 561
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
GD+ +A +LF+ MP RD+ +WN++IAG Q+G A +F+ M I+P+++T
Sbjct: 562 CGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQ---ESGIKPDKITF 618
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
L+A L G+ +H + D D + LI MY KCGS+++A + F + K
Sbjct: 619 TGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPK 678
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K + SW SMI +A HG+ + ++ +F +M Q ++PD +TF+ L+AC H GL+E+G
Sbjct: 679 KNVYSWTSMIAGYAQHGRGKEALELFYQM---QQEGVKPDWITFVGALSACAHAGLIEEG 735
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
+F+ M K + IEP++EHYGC+VDL GRAG EA+E + M++EPD VWG+LL C+
Sbjct: 736 LHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQ 794
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
++ + AE A +K +E+DPN+ G ++L+NIY G W EV K+RK++ DR K PG
Sbjct: 795 VHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQ 854
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
SWIEVD +VH F+S DKTHP+TEEI+ LE +
Sbjct: 855 SWIEVDGKVHTFYSDDKTHPQTEEIHAELERL 886
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 186/387 (48%), Gaps = 46/387 (11%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K ++ A +FD+L T + +T+MIT A A +L++ M G QP++
Sbjct: 257 IKCGDIGDATKVFDNLPTRDLVTWTSMITGLARH-GRFKQACNLFQRMEEEG-VQPDKVA 314
Query: 117 YPHVLKSC--PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
+ +L++C P+ LE K VH ++ + G+
Sbjct: 315 FVSLLRACNHPEALEQ--GKKVHARMKEVGW----------------------------- 343
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
D + TA++S YT+ G +++A +FD + R+V +W ++IAG Q+G +A F
Sbjct: 344 ---DTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLF 400
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
F +M + I PN+VT + L A L+ G+ I ++ G D + AL+ M
Sbjct: 401 FNKM---IESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSM 457
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KCGSLK+A R F++ SK+ + +WN+MI ++ H Q +N++ F+ +++ I+P+
Sbjct: 458 YAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLK---EGIKPNS 514
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
TF S+LN C +E G+ L+ K +E + LV + G A +
Sbjct: 515 STFTSILNVCKSSDSLELGKWVHFLIMKA-GLESDLHVSNALVSMFVNCGDLMSAKNLFN 573
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFA 441
M + D V W +++ G +G+ A
Sbjct: 574 DMP-KRDLVSWNTIIAGFVQHGKNQVA 599
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 200/423 (47%), Gaps = 52/423 (12%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K N A+ IFD + + Y + ++ Y Q AF L+ MV+ +P++ +
Sbjct: 157 KCGNTISAKQIFDDMREKDVYSWNLLLGGYV-QHGLYEEAFKLHEQMVQ-DSVKPDKRTF 214
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+L +C D + ++ I+K+G++ V TAL+N +
Sbjct: 215 VSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMH------------------ 256
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+ GDI +A +FD++P RD+ W S+I G ++G F A + F+R
Sbjct: 257 --------------IKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQR 302
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M E ++P++V V L A H L+ GK +H + G D + ++ A++ MY K
Sbjct: 303 MEEE---GVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTK 359
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CGS+++A FD + + SW +MI FA HG+ + + F +M+ + I P+ VTF
Sbjct: 360 CGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMI---ESGIEPNRVTF 416
Query: 358 ISLLNACTHGGLVEQGRAYFK-LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+S+L AC+ +++G+ ++ Y + ++ L+ + + G ++A V +
Sbjct: 417 MSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFE-- 472
Query: 417 KIEPDEVV-WGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGYGIML----ANIYGEL 469
KI VV W +++ + + D A + L++ I PN+ + +L ++ EL
Sbjct: 473 KISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLEL 532
Query: 470 GKW 472
GKW
Sbjct: 533 GKW 535
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 279/481 (58%), Gaps = 9/481 (1%)
Query: 46 FYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMV 105
F A L+ C +L A +F + + + +MI + Q A L++ M
Sbjct: 169 FVANSLIH-CYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFV-QKGSPDKALELFKKM- 225
Query: 106 RRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGND 165
+ + VL +C + + + V + I ++ + A+++ Y++ G+
Sbjct: 226 ESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGS- 284
Query: 166 IGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQN 225
I A++LFD M +++ V+WT M+ GY D + A + ++MP +D+ AWN++I+ QN
Sbjct: 285 IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQN 344
Query: 226 GLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
G ++A+ F + ++ NI+ NQ+TLV LSA G L+LG+ IH Y+ +NG+ ++
Sbjct: 345 GKPNEALLVFHEL--QLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNF 402
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
++++ALI MY KCG L++AR F+ K+ + W++MI A+HG ++ +F +M
Sbjct: 403 YVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKM--- 459
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
Q+ N++P+GVTF ++ AC+H GLV++ + F M +Y I P+ +HY C+VD+LGR+G
Sbjct: 460 QEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGY 519
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANI 465
E+A++ ++ M I P VWG+LL CKI+ AE A +L+E++P N G ++L+NI
Sbjct: 520 LEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNI 579
Query: 466 YGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
Y + GKWD V ++RK ++ K PGCS IE+D +H+F S D HP +E++Y L +
Sbjct: 580 YAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEV 639
Query: 526 V 526
+
Sbjct: 640 M 640
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 229/492 (46%), Gaps = 77/492 (15%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARF 67
N ++ +++++RC+ + LKQ + + G + A KL L ++L YAR
Sbjct: 27 NNERSRHTISLIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARK 86
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + PN++ + +I AYAS P S ++ + Q PN++ +P ++K+ +V
Sbjct: 87 VFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEV 146
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
+ +H +KS V +L++ Y G D+ A K+F + +++VVSW +M
Sbjct: 147 SSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCG-DLDSACKVFTTIKEKDVVSWNSM 205
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I+G+ + G PD+ A+ F++M S++++
Sbjct: 206 INGFVQKGS-----------PDK--------------------ALELFKKME---SEDVK 231
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
+ VT+V LSA L+ G+ + Y+ N ++++ ++NA++DMY KCGS+++A+R
Sbjct: 232 ASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 291
Query: 308 FDRNS-------------------------------KKRLTSWNSMINSFALHGQSENSI 336
FD KK + +WN++I+++ +G+ ++
Sbjct: 292 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEAL 351
Query: 337 CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCL 396
VF E+ NI+ + +T +S L+AC G +E GR + K I+ L
Sbjct: 352 LVFHELQL--QKNIKLNQITLVSTLSACAQVGALELGR-WIHSYIKKNGIKMNFYVTSAL 408
Query: 397 VDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPN 454
+ + + G E+A EV ++ + D VW +++ G ++G A K+ E + PN
Sbjct: 409 IHMYSKCGDLEKAREVFNSVE-KRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPN 467
Query: 455 NGGYGIMLANIY 466
G+ N++
Sbjct: 468 ----GVTFTNVF 475
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 190/576 (32%), Positives = 313/576 (54%), Gaps = 71/576 (12%)
Query: 12 LNQQVLAILERCNHINHLKQ--LQSFLTTLGQSQ-------TNFYAFKLVRFCTLKLSNL 62
+ Q++L IL+ C +I LKQ LQ F+ L S T AF L+ + T K +
Sbjct: 1 MEQKMLRILQHCKNIRELKQTHLQIFIHGLQHSDFMLPKLITVSSAFNLLDYATHKEALR 60
Query: 63 TYAR----------FIFDHLTT------------------------PNTYLYTAMITAYA 88
Y+R F F L + ++ +++ YA
Sbjct: 61 VYSRMKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSLLGFYA 120
Query: 89 SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV----LKSCPDVLESRGTKMVHT------ 138
+ + SA+ ++ +M R N I ++ ++S +L+ + + T
Sbjct: 121 NCSENLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPERNIVTWNSVVC 180
Query: 139 --------QIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
++ S FEQ P V ++++ Y R G D+ A+ +F +M ++ VVSWTA
Sbjct: 181 GLSKAGNMELAHSVFEQMPLRNEVSWNSMISGYVRIG-DVRAAQSIFYQMPEKTVVSWTA 239
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
MISGY GD+K+A ++F+ MP ++V +WN++I+G N F A+ F M ++
Sbjct: 240 MISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHM--LINGEC 297
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
RP+Q TL+ LSA H G L+ GK I+ Y+ +N L L + NALIDM+ KCG ++ A+
Sbjct: 298 RPDQTTLISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKE 357
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F SK+ + +W +M++ A++G+ +I +F++M C + +PD V FI++L+ACTH
Sbjct: 358 VFHHMSKRCIITWTTMVSGLAVNGKCREAINLFDKM--CLE-GTKPDDVIFIAVLSACTH 414
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GGLVE+G+ F M + + I+P+IEHYGC+VDLLGRAG+ EEA+ M ++P+ V+W
Sbjct: 415 GGLVEEGKRVFDQMVQEFGIKPRIEHYGCMVDLLGRAGKLEEAVRFTARMHLKPNAVIWA 474
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+LL CKI+G D + +K+++ +P+N Y +++N+ G+W++V R ++ +
Sbjct: 475 TLLFCCKIHGNGDLLKSVTEKIMDQEPSNPSYLTLVSNLSASFGRWEDVLSFRVAMRQQR 534
Query: 487 AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
K PGCS I+V +VH+F + D H + +EIY AL
Sbjct: 535 MEKVPGCSSIQVGNRVHEFLAKDTRHVQRKEIYRAL 570
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 168/469 (35%), Positives = 273/469 (58%), Gaps = 9/469 (1%)
Query: 61 NLTYARFIFDHLTTPNTYL--YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
+L A +F+ + N + + +M+T + Q + A L+ M G PN
Sbjct: 290 HLDLAYLVFEMIEGNNKDIVSWNSMVTGFV-QGGYPDKALDLFERMRNEG-VHPNAVTMV 347
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
V+ +C + + V I ++ V A ++ + + G ++ IAR LFD M
Sbjct: 348 SVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCG-EVEIARGLFDNMEK 406
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
R+VVSWT +I GY ++ + A +FDSMP +D+PAWN +I+G Q+G +A++ FR +
Sbjct: 407 RDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFREL 466
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
+ S RP+QVTL+ LSA G + +G+ IHGY+ + + L+ ++ +LIDMY K
Sbjct: 467 QLTKS-GARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKS 525
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G +++A F K + W++MI A+HG+ E +I +F +M Q+ ++P+ VTF
Sbjct: 526 GDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDM---QETQVKPNSVTFT 582
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
+LL AC+H GLV++G+ F M + Y + P+ +HY C+VD+LGRAG EEAL+ ++GM +
Sbjct: 583 NLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPL 642
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
P VWG+LL C I+G + AE A +L+EI+P N G ++L+N+Y + G W+ V ++
Sbjct: 643 APSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSEL 702
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
R+ ++D K GCS IE+D VH+F D HP + +IY L+ ++A
Sbjct: 703 RQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMA 751
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 211/474 (44%), Gaps = 75/474 (15%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTPN 76
A+ ++C LKQ+ + + + + A +L S L YAR +FD + PN
Sbjct: 144 ALFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPN 203
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
Y + +I A A+ S R M+ PN+F +P ++K+ + K V
Sbjct: 204 LYSWNILIRALATSSDPIQSVLVFIR-MLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAV 262
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD--EMSDRNVVSWTAMISGYTRV 194
H +K+ F V +L++ Y+ G+ + +A +F+ E +++++VSW +M++G+ +
Sbjct: 263 HGMAIKTSFGDDVFVLNSLIHFYASCGH-LDLAYLVFEMIEGNNKDIVSWNSMVTGFVQG 321
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G PD+ A+ F RM E + PN VT+V
Sbjct: 322 G-----------YPDK--------------------ALDLFERMRNE---GVHPNAVTMV 347
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
+SA T L LG+ + Y+ RN + ++ + NA IDM+ KCG ++ AR FD K+
Sbjct: 348 SVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKR 407
Query: 315 RLTSWNSMINSFA-------------------------------LHGQSENSICVFEEMM 343
+ SW ++I+ +A G+ + ++ +F E +
Sbjct: 408 DVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRE-L 466
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
+ RPD VT +S L+AC G ++ G + K RI+ L+D+ ++
Sbjct: 467 QLTKSGARPDQVTLLSTLSACAQLGAMDIGE-WIHGYIKKERIQLNRNLATSLIDMYSKS 525
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA--EFAVKKLIEIDPNN 455
G E+A+EV + D VW +++ G ++GR + A F + ++ PN+
Sbjct: 526 GDVEKAIEVFHSIG-NKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNS 578
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 189/581 (32%), Positives = 304/581 (52%), Gaps = 84/581 (14%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
+ Q + ++ H++H+++L + L G A KL+ L+ L +R IF
Sbjct: 57 VEQHLASLPHGLQHLHHVQELHAQLLKHGLHLDPLAASKLISSYALQ-RRLPASRRIFAS 115
Query: 72 LTTPN--TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
P T+L ++ AYA A +A SL+ M PQ + F Y ++K+ L
Sbjct: 116 FPNPQATTFLPNTLLRAYALN-ALPHAAVSLFSAM-----PQRDSFTYSFLIKA----LS 165
Query: 130 SRGT---KMVHTQIVKSGFEQYPVVETALVNSYSRSGN---------------------- 164
S G + VH+ +VK G + V AL+++YS++G
Sbjct: 166 SSGLTPLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSA 225
Query: 165 --------DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWN 216
++ AR++FDEM D++ VSW ++ GYT+ G +++A LF MP+R+V +W+
Sbjct: 226 MAAMVRQGEVASARRMFDEMPDKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWS 285
Query: 217 SVIAG-------------------------------CTQNGLFSDAISFFRRMGMEVSDN 245
+V++G C QNGL +A F +M
Sbjct: 286 TVVSGYCKKGDIEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAA--- 342
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
+ + +V L+A +G L LGK IH YV L + + NA+IDM+ KCG + A
Sbjct: 343 VELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRAD 402
Query: 306 RAFDRN-SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
FD ++K SWN++I FA+HG + ++ F +M + RPD VT I++L+AC
Sbjct: 403 YVFDTEIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQM---KLQGFRPDAVTMINVLSAC 459
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
TH G VE+GR +F M + Y I PQIEHYGC++DLLGR G EEA+ ++K M +P+EV+
Sbjct: 460 THMGFVEEGRQHFSNMERDYGIVPQIEHYGCMIDLLGRGGLIEEAVGLIKSMPWDPNEVI 519
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WGSLL+ C+++ ++AE AV +L ++ P+N G +L+NIY E G+W ++ K R +K
Sbjct: 520 WGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKG 579
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ K+ G SWIE+D+ H+F D+ H +++I + ++ +
Sbjct: 580 TGSQKSAGSSWIELDEAFHEFTVGDRKHSDSDQISEMVDRL 620
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 144/350 (41%), Gaps = 57/350 (16%)
Query: 95 SSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES-RGTKMVHTQIVKSGFEQYPVVET 153
S+A S R R G P + + H L S P L+ + +H Q++K G P+ +
Sbjct: 36 STAASALRPAPRWGAPSQRRLVEQH-LASLPHGLQHLHHVQELHAQLLKHGLHLDPLAAS 94
Query: 154 ALVNSYSRSGNDIGIARKLFDEMSDRNVVSW--TAMISGYTRVGDIKNAASLFDSMPDRD 211
L++SY+ + +R++F + ++ ++ Y A SLF +MP RD
Sbjct: 95 KLISSYALQ-RRLPASRRIFASFPNPQATTFLPNTLLRAYALNALPHAAVSLFSAMPQRD 153
Query: 212 VPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKV 271
S SF L+ ALS+ G T + +
Sbjct: 154 -----------------SFTYSF------------------LIKALSSSGLTPL----RA 174
Query: 272 IHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
+H +V + G D+++ NALID Y K G +A + F+ ++ SWNS + + G+
Sbjct: 175 VHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSAMAAMVRQGE 234
Query: 332 SENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE 391
++ +F+EM D V++ ++L+ T G +E F+ M E +
Sbjct: 235 VASARRMFDEM-------PDKDTVSWNTVLDGYTKAGKMEDAFELFQCMP-----ERNVV 282
Query: 392 HYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+ +V + G E A + M + + V W +++ C G + A
Sbjct: 283 SWSTVVSGYCKKGDIEMARVIFDKMPTK-NLVTWTIMVSACAQNGLVEEA 331
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 174/496 (35%), Positives = 282/496 (56%), Gaps = 10/496 (2%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
K+L + G + LV+ +L + AR +FD + + + MI+ Y
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSL-CGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
+ S L +M R P VL +C V + K VH + + E
Sbjct: 214 MKEYEES-IELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSL 271
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
+E ALVN+Y+ G ++ IA ++F M R+V+SWT+++ GY G++K A + FD MP
Sbjct: 272 RLENALVNAYAACG-EMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPV 330
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
RD +W +I G + G F++++ FR M S + P++ T+V L+A H G L++G
Sbjct: 331 RDRISWTIMIDGYLRAGCFNESLEIFREMQ---SAGMIPDEFTMVSVLTACAHLGSLEIG 387
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
+ I Y+ +N + D + NALIDMY KCG ++A++ F ++ +W +M+ A +
Sbjct: 388 EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANN 447
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
GQ + +I VF +M QD +I+PD +T++ +L+AC H G+V+Q R +F M +RIEP
Sbjct: 448 GQGQEAIKVFFQM---QDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPS 504
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
+ HYGC+VD+LGRAG +EA E+++ M + P+ +VWG+LL +++ AE A KK++
Sbjct: 505 LVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKIL 564
Query: 450 EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLD 509
E++P+NG +L NIY +W ++R+VR+ + D KTPG S IEV+ H+F + D
Sbjct: 565 ELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGD 624
Query: 510 KTHPRTEEIYDALESM 525
K+H ++EEIY LE +
Sbjct: 625 KSHLQSEEIYMKLEEL 640
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 9/238 (3%)
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + A LF +P+ DV WN++I G ++ + + + M + + + P+ T
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNM---LKEGVTPDSHTFP 138
Query: 255 CALSAIGHTG-MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
L+ + G L GK +H +V + GL + ++ NAL+ MY CG + AR FDR K
Sbjct: 139 FLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCK 198
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ + SWN MI+ + + E SI + EM R + + P VT + +L+AC+ +
Sbjct: 199 EDVFSWNLMISGYNRMKEYEESIELLVEMER---NLVSPTSVTLLLVLSACSKVKDKDLC 255
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ + +++ + EP + LV+ G + A+ + + MK D + W S++ G
Sbjct: 256 KRVHEYVSEC-KTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKG 311
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 166/465 (35%), Positives = 266/465 (57%), Gaps = 9/465 (1%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
++ AR +FD + + +I Y + A A +Y+ M G +P+ +
Sbjct: 206 DMENARKVFDESPVRDLVSWNCLINGY-KKIGEAEKAIYVYKLMESEG-VKPDDVTMIGL 263
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
+ SC + + K + + ++G + AL++ +S+ G DI AR++FD + R
Sbjct: 264 VSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCG-DIHEARRIFDNLEKRT 322
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
+VSWT MISGY R G + + LFD M ++DV WN++I G Q DA++ F+ M
Sbjct: 323 IVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQ- 381
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ N +P+++T++ LSA G L +G IH Y+ + L L+ + +L+DMY KCG+
Sbjct: 382 --TSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGN 439
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+ EA F + ++ ++I ALHG + +I F EM+ D I PD +TFI L
Sbjct: 440 ISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMI---DAGIAPDEITFIGL 496
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC HGG+++ GR YF M + + PQ++HY +VDLLGRAG EEA +++ M +E
Sbjct: 497 LSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEA 556
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
D VWG+LL GC+++G + E A KKL+E+DP++ G ++L +YGE W++ ++ R+
Sbjct: 557 DAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARR 616
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
M+ +R K PGCS IEV+ V +F DK+ P +E+IYD L +
Sbjct: 617 MMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCL 661
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 130/494 (26%), Positives = 232/494 (46%), Gaps = 78/494 (15%)
Query: 11 TLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARFIF 69
L+ +L++LE+C + HLKQ+Q+ + G F + +L+ FC L S L Y+ I
Sbjct: 51 VLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKIL 110
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRG--QPQPNQFIYPHVLKSCPDV 127
+ PN + + I + S+ + +F LY+ M+R G + +P+ F YP + K C D+
Sbjct: 111 KGIENPNIFSWNVTIRGF-SESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADL 169
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
S M+ ++K E V A ++ ++ G D+ ARK+FDE R++VSW +
Sbjct: 170 RLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCG-DMENARKVFDESPVRDLVSWNCL 228
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I+GY ++G+ + A ++ M S+ ++
Sbjct: 229 INGYKKIGEAEKAIYVYKLME----------------------------------SEGVK 254
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P+ VT++ +S+ G L GK + YV NGL + + NAL+DM+ KCG + EARR
Sbjct: 255 PDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRI 314
Query: 308 FDRNSKKRLTSWNSMINSFALHG-------------------------------QSENSI 336
FD K+ + SW +MI+ +A G + ++++
Sbjct: 315 FDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDAL 374
Query: 337 CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCL 396
+F+EM Q N +PD +T I L+AC+ G ++ G + + K Y + + L
Sbjct: 375 ALFQEM---QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSLSLNVALGTSL 430
Query: 397 VDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPN 454
VD+ + G EAL V G++ + + + +++ G ++G A ++I+ I P+
Sbjct: 431 VDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPD 489
Query: 455 NGGY-GIMLANIYG 467
+ G++ A +G
Sbjct: 490 EITFIGLLSACCHG 503
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 190/566 (33%), Positives = 301/566 (53%), Gaps = 66/566 (11%)
Query: 9 NQTLNQQVLAILER-CNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARF 67
+ L +Q LA L R H+++L + + G A +LV L L L +R
Sbjct: 347 QRRLVEQHLASLPRGLPRAAHVRELHAQVLKQGLHLNPRAAARLVSAYAL-LRLLPSSRR 405
Query: 68 IFDHLTTP--NTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
+FD + P + +L M+ AYA P A +AFS P+ + F Y ++K+
Sbjct: 406 VFDAIRDPHADAFLANTMLRAYALGGAPRDALAAFS--------AMPRRDSFTYSFLIKA 457
Query: 124 CPDVLESRGT---KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
L + G + VH+ +VK G + V AL+++YS++G ARK+FDEM +R+
Sbjct: 458 ----LSAAGVAPVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGG-FSDARKVFDEMPERD 512
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG- 239
VVSW ++ R G++ A LFD MP++D +WN+++ G T+ G A F+RM
Sbjct: 513 VVSWNTAMAAMVREGELAGARKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPE 572
Query: 240 ---------------------------------------MEVSDNIRPNQVTLVCALSAI 260
M ++ + +V L+A
Sbjct: 573 RNVVSWSTMVSGYCKKGDLEMARVIFDKMPGKNLVTWTIMMKEASVELDVAAVVSILAAC 632
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS-KKRLTSW 319
+G L LGK IH YV + L + + NALIDM+ KCG + A FD + +K SW
Sbjct: 633 AESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSW 692
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
NS+I FA+HG + ++ +F +M + PD VT I++L+ACTH G V++GR YF
Sbjct: 693 NSIIGGFAMHGHGDKALELFAQM---KQQGFNPDAVTMINVLSACTHMGFVDEGRRYFSN 749
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
M + Y I PQIEHYGC++DLLGR G +EA++++K M EP+EV+WGSLL+ C+++ +
Sbjct: 750 MERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVE 809
Query: 440 FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVD 499
+AE AV +L ++ P+N G +L+NIY E G+W ++ K R +K + KT G SW+E++
Sbjct: 810 YAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELN 869
Query: 500 KQVHQFHSLDKTHPRTEEIYDALESM 525
+ H+F D+ H +++I + ++ +
Sbjct: 870 ETFHEFTVGDRKHQDSDQISEMVDRL 895
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 51/278 (18%)
Query: 108 GQPQPNQFIYPHVLKSCPDVL-ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDI 166
G P + + H L S P L + + +H Q++K G P LV++Y+ +
Sbjct: 343 GAPSQRRLVEQH-LASLPRGLPRAAHVRELHAQVLKQGLHLNPRAAARLVSAYALL-RLL 400
Query: 167 GIARKLFDEMSDRNVVSWTA--MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQ 224
+R++FD + D + ++ A M+ Y G ++A + F +MP RD
Sbjct: 401 PSSRRVFDAIRDPHADAFLANTMLRAYALGGAPRDALAAFSAMPRRD------------- 447
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
S SF L+ ALSA G + + +H +V + G D
Sbjct: 448 ----SFTYSF------------------LIKALSAAGVAPV----RAVHSHVVKLGSVED 481
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
+F+ NALID Y K G +AR+ FD ++ + SWN+ + + G+ + +F+EM
Sbjct: 482 TFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGARKLFDEM-- 539
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK 382
D V++ ++L+ T G VE F+ M +
Sbjct: 540 -----PEKDTVSWNTILDGYTKAGEVEAAFELFQRMPE 572
>gi|297846398|ref|XP_002891080.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336922|gb|EFH67339.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 562
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 180/515 (34%), Positives = 288/515 (55%), Gaps = 49/515 (9%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTPNT 77
+++ C + +KQLQS T G Q++F +L+ C + +L++A IF H+ P T
Sbjct: 9 MIQNCVTFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVKIFRHIPKPLT 68
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQP----NQFIYPHVLKSCPDVLESRGT 133
+ A+I +A +H S AFS YR M++R + LK+C L S
Sbjct: 69 NDWNAIIRGFAG-SSHPSLAFSWYRSMLQRSSSSALCRVDALTCSFTLKACARALCSSAM 127
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+H QI + GF ++ T L+++YS++
Sbjct: 128 VQIHCQISRRGFSADALLCTTLLDAYSKN------------------------------- 156
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
GD+ +A LFD M RDV +WN++IAG S+A+ ++RM ME IR ++VT+
Sbjct: 157 -GDLISALKLFDEMSVRDVASWNALIAGLVAGNRASEALELYKRMEME---GIRRSEVTV 212
Query: 254 VCALSAIGHTGMLQLG-KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR-N 311
V AL A H G ++ G K++HGY+ LD + +SNA+IDMY KCG + +A + F++
Sbjct: 213 VAALGACSHLGDVKEGEKILHGYIKDEKLDHNVIVSNAVIDMYSKCGFVDKAFQVFEQFT 272
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN-IRPDGVTFISLLNACTHGGLV 370
KK + +WN+MI F++HG++ ++ +FE++ +HN I+PD V++++ L AC H GLV
Sbjct: 273 GKKSVVTWNTMITGFSVHGEAHRALEIFEKL----EHNGIKPDDVSYLAALTACRHTGLV 328
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
E G + F M +EP ++HYGC+VDLL RAGR EA +++ M + PD V+W SLL
Sbjct: 329 EYGISIFNNMA-CNGVEPNMKHYGCVVDLLSRAGRLREAHDIICSMSMVPDPVLWQSLLG 387
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
+I+ + AE A +K+ E+ NN G ++L+N+Y G+W +V VR ++ + K
Sbjct: 388 ASEIHNNVEMAEIASRKIKEMGVNNDGDFVLLSNVYAAQGRWKDVGLVRDDMESKQVKKV 447
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PG S+IE +HQFH+ DK+H + EIY+ ++ +
Sbjct: 448 PGISYIEAKGTIHQFHNSDKSHEQWREIYEKIDEI 482
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 170/511 (33%), Positives = 276/511 (54%), Gaps = 44/511 (8%)
Query: 16 VLAILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
+++++ C H+ L KQ+ + G LV K N+ A +F+ +
Sbjct: 224 LVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYA-KCGNVNTAHKLFERM 282
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
+ + A+I Y+ H A + + M RG +PN VL +C +
Sbjct: 283 PIRDVASWNAIIGGYSLNSQH-HEALAFFNRMQVRG-IKPNSITMVSVLPACAHLFALEQ 340
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+ +H ++SGFE VV ALVN Y++
Sbjct: 341 GQQIHGYAIRSGFESNDVVGNALVNMYAK------------------------------- 369
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
G++ +A LF+ MP ++V AWN++I+G +Q+G +A++ F M + I+P+
Sbjct: 370 -CGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQ---AQGIKPDSFA 425
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
+V L A H L+ GK IHGY R+G + + + L+D+Y KCG++ A++ F+R
Sbjct: 426 IVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP 485
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
++ + SW +MI ++ +HG E+++ +F +M Q+ + D + F ++L AC+H GLV+Q
Sbjct: 486 EQDVVSWTTMILAYGIHGHGEDALALFSKM---QETGTKLDHIAFTAILTACSHAGLVDQ 542
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G YF+ M Y + P++EHY CLVDLLGRAG +EA ++K M +EPD VWG+LL C
Sbjct: 543 GLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGAC 602
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+I+ + E A K L E+DP+N GY ++L+NIY E +W++V K+RKM+K++ K PG
Sbjct: 603 RIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPG 662
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
CS + V + V F D+THP++E+IY LE
Sbjct: 663 CSVVAVHRDVQTFLVGDRTHPQSEQIYAMLE 693
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 187/393 (47%), Gaps = 42/393 (10%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K +L AR +FD + + + A+I Y SQ A +L+ +M G +PN
Sbjct: 167 KCGSLENARQVFDRMPKRDVVSWNAIIAGY-SQNGQPYEALALFSEMQVNG-IKPNSSTL 224
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
V+ C +L K +H ++SG E +V LVN Y++ GN + A KLF+ M
Sbjct: 225 VSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGN-VNTAHKLFERMP 283
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
R+V SW A+I GY+ N +A++FF R
Sbjct: 284 IRDVASWNAIIGGYSL-------------------------------NSQHHEALAFFNR 312
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M + I+PN +T+V L A H L+ G+ IHGY R+G + + + NAL++MY K
Sbjct: 313 MQVR---GIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAK 369
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG++ A + F+R KK + +WN++I+ ++ HG ++ +F EM Q I+PD
Sbjct: 370 CGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEM---QAQGIKPDSFAI 426
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+S+L AC H +EQG+ ++ E + LVD+ + G A ++ + M
Sbjct: 427 VSVLPACAHFLALEQGKQIHGYTIRS-GFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP 485
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE 450
E D V W +++ I+G + A K+ E
Sbjct: 486 -EQDVVSWTTMILAYGIHGHGEDALALFSKMQE 517
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 170/346 (49%), Gaps = 49/346 (14%)
Query: 95 SSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETA 154
+ A LY M R G P++ ++ V+K+C + + + VH I+ GFE
Sbjct: 102 NKALRLYYQMQRTG-INPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFES------- 153
Query: 155 LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA 214
+V+ TA+ S YT+ G ++NA +FD MP RDV +
Sbjct: 154 -------------------------DVIVGTALASMYTKCGSLENARQVFDRMPKRDVVS 188
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
WN++IAG +QNG +A++ F M + + I+PN TLV + H L+ GK IH
Sbjct: 189 WNAIIAGYSQNGQPYEALALFSEMQV---NGIKPNSSTLVSVMPVCAHLLALEQGKQIHC 245
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
Y R+G++ D + N L++MY KCG++ A + F+R + + SWN++I ++L+ Q
Sbjct: 246 YAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHE 305
Query: 335 SICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY- 393
++ F M Q I+P+ +T +S+L AC H +EQG+ Y I E
Sbjct: 306 ALAFFNRM---QVRGIKPNSITMVSVLPACAHLFALEQGQ-----QIHGYAIRSGFESND 357
Query: 394 ---GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
LV++ + G A ++ + M + + V W ++++G +G
Sbjct: 358 VVGNALVNMYAKCGNVNSAYKLFERMP-KKNVVAWNAIISGYSQHG 402
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 8/217 (3%)
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
W I G +NG ++ A+ + +M I P+++ + + A G LQ G+ +H
Sbjct: 88 WKETIIGYVKNGFWNKALRLYYQMQ---RTGINPDKLVFLSVIKACGSQSDLQAGRKVHE 144
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
+ G + D + AL MY KCGSL+ AR+ FDR K+ + SWN++I ++ +GQ
Sbjct: 145 DIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYE 204
Query: 335 SICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG 394
++ +F EM Q + I+P+ T +S++ C H +EQG+ ++ IE +
Sbjct: 205 ALALFSEM---QVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRS-GIESDVLVVN 260
Query: 395 CLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
LV++ + G A ++ + M I D W +++ G
Sbjct: 261 GLVNMYAKCGNVNTAHKLFERMPIR-DVASWNAIIGG 296
>gi|297733949|emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 257/445 (57%), Gaps = 12/445 (2%)
Query: 89 SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQY 148
SQ LY MV + +PN+F Y ++ C R + VH ++V +G+
Sbjct: 6 SQSETPHKLVELYNRMVE-AEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANGYCTN 64
Query: 149 PVVETALVNSYSRSGNDIGI--ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDS 206
V T+LVN Y+ +G G+ AR++FDE+ DRN+VSW ++++GY R GD+ A +FD
Sbjct: 65 VFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDE 124
Query: 207 MPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGML 266
MP+R+V +W ++IAGC Q G A+ F M ++ +QV LV ALSA G L
Sbjct: 125 MPERNVVSWTTMIAGCAQIGRCKQALHLFHEM---RRAGVKLDQVALVAALSACAELGDL 181
Query: 267 QLGKVIHGYV----YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSM 322
+LG IH Y+ + L ++N+LI MY CG + +A + F ++ SW SM
Sbjct: 182 KLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSM 241
Query: 323 INSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK 382
I FA G +E ++ VF+ M R RPDG+TFI +L AC+H G V+QGR +F+ M K
Sbjct: 242 ITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNK 301
Query: 383 TYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAE 442
+ I P+IEHYGC+VDLL RAG +EA +++ M ++P++ VWG+LL GC+I+ + A
Sbjct: 302 KWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAELAS 361
Query: 443 FAVKKL-IEIDPNN-GGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDK 500
+KL +E+ P+ GY ++L+N+Y +W +V VR+ + + K G SW++++
Sbjct: 362 HVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQING 421
Query: 501 QVHQFHSLDKTHPRTEEIYDALESM 525
VH F + D TH +Y+ L +
Sbjct: 422 VVHDFVAGDWTHKHASSVYEMLSKI 446
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 174/500 (34%), Positives = 275/500 (55%), Gaps = 40/500 (8%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP-NTYLYTAMITAYA 88
+QL + L G A +LV +++ AR +FD + N +L+ +I AYA
Sbjct: 88 RQLHARLLVSGTGLDAVLATRLVDLYA-SCGHVSLARRVFDEMPNQGNVFLWNVLIRAYA 146
Query: 89 SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQY 148
+ +A LYR M+ G +P+ F YP VLK+C +L+ + VH +++++ +
Sbjct: 147 -RDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRVMRTNWAT- 204
Query: 149 PVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP 208
+V T +I Y + G + A ++F+
Sbjct: 205 -------------------------------DVFVCTGLIDMYAKCGCMDEAWAVFNDTT 233
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
RD WNS+IA C QNG ++A++ R M E I P TLV A+SA L
Sbjct: 234 IRDAAVWNSMIAACGQNGRPAEALTLCRNMAAE---GIAPTIATLVSAISAAAVASALPR 290
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
G+ +HGY +R G + +L+DMY K G + A F++ + L SWN+MI F +
Sbjct: 291 GRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGM 350
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
HG ++++ +F M + + PD +TF+ +L+AC HGG+V++ + F LM Y I+P
Sbjct: 351 HGHADHAFELFSRMR--SEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKP 408
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL 448
++HY CLVD+LG +GRF+EA +V+KGM ++PD +WG+LLNGCKI+ + AE A++KL
Sbjct: 409 TVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKL 468
Query: 449 IEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSL 508
IE++P + G ++L+NIY E GKW+E +VRK++ +R K CSWIE+ + H F
Sbjct: 469 IELEPEDAGNYVLLSNIYAESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVG 528
Query: 509 DKTHPRTEEIYDALESMVAL 528
D +HPR+++IY+ LE + L
Sbjct: 529 DASHPRSDDIYEELERLEGL 548
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 174/520 (33%), Positives = 293/520 (56%), Gaps = 18/520 (3%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL-------KLSNLT-YARFI 68
LA+L+ C+ + LK + FL F A +L+ K +NL YA I
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYAYGI 75
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
F + PN +++ +I + S A S AF Y M++ + P+ +P ++K+ ++
Sbjct: 76 FSQIQNPNLFVFNVLIRCF-STGAEPSKAFGFYTQMLK-SRIWPDNITFPFLIKASTEME 133
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ H+QIV+ GF+ VE +LV+ Y+ G I A ++F +M R+VVSWT+M+
Sbjct: 134 CVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGL-IAAAGRIFGQMPFRDVVSWTSMV 192
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
+GY + G +++A +FD MP R++ W+ +I G +N F AI F M E +
Sbjct: 193 AGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKRE---GVVA 249
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
N+ +V +S+ H G L+ G+ H YV ++ + ++ + AL+DMY +CG +++A R F
Sbjct: 250 NETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVF 309
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
+ K SW+S+I A+HG + +I F +M+R P +T ++L+AC+HGG
Sbjct: 310 EELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRL---GFSPRDITLTAVLSACSHGG 366
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
LV++G ++ M + Y IEP++EHYGC+VD+LGRAG+ EA + M ++P+ + G+L
Sbjct: 367 LVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGAL 426
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L CKIY T+ AE LIE+ P + GY ++L+NIY G+W+++ +R ++K++
Sbjct: 427 LGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVK 486
Query: 489 KTPGCSWIEVDKQVHQFH-SLDKTHPRTEEIYDALESMVA 527
K PG S IE+D ++++F D+ HP +I E ++
Sbjct: 487 KPPGWSLIEIDGKINKFSMGDDQKHPEMGKIKRLWEEILG 526
>gi|357439099|ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 526
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 191/507 (37%), Positives = 293/507 (57%), Gaps = 16/507 (3%)
Query: 23 CNHINHLKQLQSFLT--TLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLY 80
C + HL+Q +F+ L Q+ N F + + +L + +Y+ F F+H ++Y
Sbjct: 23 CTTLTHLQQTHTFILKHALFQNDINLSRF-IHKTASLNYPSYSYSIFTFNHNRPFPIFVY 81
Query: 81 TAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQI 140
+I YA ++A A S++R VRR + + P+VLKS + + K +H
Sbjct: 82 NNII--YALYSSNAKLAVSIFRS-VRRLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHCVG 138
Query: 141 VKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
V +G ++ V ++L+ YS D+ ARKLFDE V AMI Y +VGD+ NA
Sbjct: 139 VVTGLDKNVSVCSSLIQMYS--CYDVCSARKLFDEFGGNGCV-LNAMIVAYVKVGDVSNA 195
Query: 201 ASLFDSM--PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
LFDSM D+DV +W ++I+G TQ ++AI FRRM +E N++P+++ ++ LS
Sbjct: 196 RKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLE---NVKPDEIAILAVLS 252
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
A G L LG+ IH Y+ ++ L + N+LIDMY K G++++A F+ K + +
Sbjct: 253 ACADLGALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIIT 312
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
W +MI ALHG + ++ VF M + + ++P+ VTFI++L+AC+H GLVE GR YF
Sbjct: 313 WTTMIAGLALHGLGKEALRVFSCMEK--EDRVKPNEVTFIAILSACSHVGLVELGRDYFT 370
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
M Y IEP+IEHYGC++DLLGRAG +EA E+V M E + +WGSLL G
Sbjct: 371 SMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDA 430
Query: 439 DFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV 498
+ AE A++ L ++P + G +L+N Y LG+W+E R VRK+++D K PG S+IEV
Sbjct: 431 ELAEEALRHLTVLEPGHCGNYSLLSNTYASLGRWNESRMVRKVMQDAGVEKVPGVSFIEV 490
Query: 499 DKQVHQFHSLDKTHPRTEEIYDALESM 525
+ V++F + DK +IYD L S+
Sbjct: 491 NNIVYEFIAGDKLSIYFVDIYDVLHSL 517
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 176/470 (37%), Positives = 267/470 (56%), Gaps = 46/470 (9%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + L A +FD + N +T MI+AY+++ A M R G +PN F
Sbjct: 101 VKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLN--DKALKCLILMFREG-VRPNMFT 157
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
Y VL++C + R +H I+K+G E V +AL++ YS+
Sbjct: 158 YSSVLRACDGLPNLR---QLHCGIIKTGLESDVFVRSALIDVYSK--------------- 199
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
W+ D+ NA +FD MP RD+ WNS+I G QN ++A++ F+
Sbjct: 200 -------WS----------DLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFK 242
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
RM +Q TL L A +L+LG+ +H +V + D D ++NALIDMY
Sbjct: 243 RMKRA---GFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYC 297
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCGSL++A AF R +K + SW++M+ A +G S ++ +FE M ++ RP+ +T
Sbjct: 298 KCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESM---KESGSRPNYIT 354
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+ +L AC+H GLVE+G YF+ M K + ++P EHYGCL+DLLGRAGR +EA++++ M
Sbjct: 355 VLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEM 414
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
+ EPD V W +LL C+++ D A +A KK+IE++P + G I+L+NIY +W++V
Sbjct: 415 ECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVA 474
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+VRK + +R KTPGCSWIEVDKQ+H F D +HP+ EEI L ++
Sbjct: 475 EVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLI 524
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 174/438 (39%), Gaps = 82/438 (18%)
Query: 80 YTAMITAYASQPAHASSAFSLYR-----DMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
Y A + ++ A+ + L+R D + R + Y ++K C + K
Sbjct: 16 YVADPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGK 75
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
VH I G+E V L+N Y + L +E D
Sbjct: 76 RVHEHIFCKGYEPKMFVVNTLLNMY--------VKFNLLEEAED---------------- 111
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
LFD MP+R+V +W ++I+ + N L A+ M E +RPN T
Sbjct: 112 --------LFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFRE---GVRPNMFTYS 159
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
L A G+ L + +H + + GL+ D F+ +ALID+Y K L A FD +
Sbjct: 160 SVLRAC--DGLPNL-RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTR 216
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
L WNS+I FA + ++ +F+ M R D T S+L ACT L+E GR
Sbjct: 217 DLVVWNSIIGGFAQNSDGNEALNLFKRMKRA---GFLADQATLTSVLRACTGLALLELGR 273
Query: 375 -----------------AYFKLMTK-----------TYRIEPQIEHYGCLVDLLGRAGRF 406
A + K + +E + + +V L + G
Sbjct: 274 QVHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYS 333
Query: 407 EEALEVVKGMK---IEPDEVVWGSLLNGCKIYGRTDFAEF---AVKKLIEIDPNNGGYGI 460
+ALE+ + MK P+ + +L C G + + ++KKL +DP YG
Sbjct: 334 RQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGC 393
Query: 461 MLANIYGELGKWDEVRKV 478
++ ++ G G+ DE K+
Sbjct: 394 LI-DLLGRAGRLDEAVKL 410
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 126/261 (48%), Gaps = 13/261 (4%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
++L C+ + +L+QL + G F L+ + K S+L A +FD + T +
Sbjct: 160 SVLRACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYS-KWSDLDNALGVFDEMPTRDL 218
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
++ ++I +A Q + + A +L++ M R G +Q VL++C + + VH
Sbjct: 219 VVWNSIIGGFA-QNSDGNEALNLFKRMKRAGF-LADQATLTSVLRACTGLALLELGRQVH 276
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
++K F+Q ++ AL++ Y + G+ + A F M +++V+SW+ M++G + G
Sbjct: 277 VHVLK--FDQDLILNNALIDMYCKCGS-LEDANSAFSRMVEKDVISWSTMVAGLAQNGYS 333
Query: 198 KNAASLFDSMPDR-DVPAWNSVIA---GCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
+ A LF+SM + P + +V+ C+ GL +FR M + P +
Sbjct: 334 RQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFG--VDPGREHY 391
Query: 254 VCALSAIGHTGML-QLGKVIH 273
C + +G G L + K+IH
Sbjct: 392 GCLIDLLGRAGRLDEAVKLIH 412
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/496 (35%), Positives = 282/496 (56%), Gaps = 10/496 (2%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
K+L + G + LV+ +L + AR +FD + + + MI+ Y
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSL-CGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
+ S L +M R P VL +C V + K VH + + E
Sbjct: 214 MKEYEES-IELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSL 271
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
+E ALVN+Y+ G ++ IA ++F M R+V+SWT+++ GY G++K A + FD MP
Sbjct: 272 RLENALVNAYAACG-EMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPV 330
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
RD +W +I G + G F++++ FR M S + P++ T+V L+A H G L++G
Sbjct: 331 RDRISWTIMIDGYLRAGCFNESLEIFREMQ---SAGMIPDEFTMVSVLTACAHLGSLEIG 387
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
+ I Y+ +N + D + NALIDMY KCG ++A++ F ++ +W +M+ A +
Sbjct: 388 EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANN 447
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
GQ + +I VF +M QD +I+PD +T++ +L+AC H G+V+Q R +F M +RIEP
Sbjct: 448 GQGQEAIKVFFQM---QDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPS 504
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
+ HYGC+VD+LGRAG +EA E+++ M + P+ +VWG+LL +++ AE A KK++
Sbjct: 505 LVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKIL 564
Query: 450 EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLD 509
E++P+NG +L NIY +W ++R+VR+ + D KTPG S IEV+ H+F + D
Sbjct: 565 ELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGD 624
Query: 510 KTHPRTEEIYDALESM 525
K+H ++EEIY LE +
Sbjct: 625 KSHLQSEEIYMKLEEL 640
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 122/251 (48%), Gaps = 14/251 (5%)
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
V W + + G+ + A LF +P+ DV WN++I G ++ + + + M
Sbjct: 74 VFWCSRLGGH-----VSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNM--- 125
Query: 242 VSDNIRPNQVTLVCALSAIGHTG-MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ + + P+ T L+ + G L GK +H +V + GL + ++ NAL+ MY CG
Sbjct: 126 LKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGL 185
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+ AR FDR K+ + SWN MI+ + + E SI + EM R + + P VT + +
Sbjct: 186 MDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMER---NLVSPTSVTLLLV 242
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC+ + + + +++ + EP + LV+ G + A+ + + MK
Sbjct: 243 LSACSKVKDKDLCKRVHEYVSEC-KTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR- 300
Query: 421 DEVVWGSLLNG 431
D + W S++ G
Sbjct: 301 DVISWTSIVKG 311
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/517 (32%), Positives = 290/517 (56%), Gaps = 18/517 (3%)
Query: 17 LAILERCN---HINHLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDHL 72
+++L CN +N +++ S ++ G A L+ +C K + + AR FD +
Sbjct: 284 VSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYC--KCNCIQDARETFDRM 341
Query: 73 TTPNTYLYTAMITAYASQ----PAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
+ + ++AMI YA F L M R G PN+ + +LK+C
Sbjct: 342 SKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREG-VFPNKVTFMSILKACSVHG 400
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ +H +I K GFE ++TA+ N Y++ G+ I A ++F +M ++NVV+W +++
Sbjct: 401 ALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGS-IYEAEQVFSKMENKNVVAWASLL 459
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
+ Y + GD+ +A +F M R+V +WN +IAG Q+G + M +E +P
Sbjct: 460 TMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVE---GFQP 516
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
++VT++ L A G L+ GK++H + GL+ D+ ++ +LI MY KCG + EAR F
Sbjct: 517 DRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVF 576
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
D+ S + +WN+M+ + HG ++ +F+ M++ + P+ +TF ++++AC G
Sbjct: 577 DKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLK---ERVPPNEITFTAVISACGRAG 633
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
LV++GR F++M + +R++P +HYGC+VDLLGRAGR +EA E ++ M EPD VW +L
Sbjct: 634 LVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHAL 693
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L CK + AE+A ++ ++P+N + L+NIY + G+WD+ KVRK++ D+
Sbjct: 694 LGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLK 753
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K G S IE+D ++H F + D HP + I+ LE +
Sbjct: 754 KDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEML 790
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 198/428 (46%), Gaps = 55/428 (12%)
Query: 39 LGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAF 98
LG S NFY+ K ++ +F +T + +++MI AYA H + AF
Sbjct: 115 LGNSLINFYS---------KFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNN-HPAKAF 164
Query: 99 SLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNS 158
+ M + +PN+ + +LK+C + + +HT + SG E V TAL+
Sbjct: 165 DTFERM-KDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITM 223
Query: 159 YSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSV 218
YS+ G +I +A ++F +M +RNVVSWTA+I + + A L++ M
Sbjct: 224 YSKCG-EISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKM----------- 271
Query: 219 IAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR 278
+ I PN VT V L++ L G+ IH ++
Sbjct: 272 -----------------------LQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISE 308
Query: 279 NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG-QSENSIC 337
GL+ D ++NALI MY KC +++AR FDR SK+ + SW++MI +A G Q + S+
Sbjct: 309 RGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLD 368
Query: 338 -VFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCL 396
VF+ + R + + P+ VTF+S+L AC+ G +EQGR ++K E +
Sbjct: 369 EVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKV-GFESDRSLQTAI 427
Query: 397 VDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN-----GCKIYGRTDFAEFAVKKLIEI 451
++ + G EA +V M+ + V W SLL G F+E + + ++
Sbjct: 428 FNMYAKCGSIYEAEQVFSKME-NKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSW 486
Query: 452 DPNNGGYG 459
+ GY
Sbjct: 487 NLMIAGYA 494
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 110/231 (47%), Gaps = 10/231 (4%)
Query: 226 GLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
G +AI +G+ + N T C + + GK++H + GL +D
Sbjct: 57 GRLKEAIQL---LGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDI 113
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
++ N+LI+ Y K G + + F R + + + +W+SMI ++A + + FE M
Sbjct: 114 YLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERM--- 170
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
+D NI P+ +TF+S+L AC + ++E+ R + K +E + L+ + + G
Sbjct: 171 KDANIEPNRITFLSILKACNNYSMLEKARE-IHTVVKASGMETDVAVATALITMYSKCGE 229
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPN 454
A E+ + MK E + V W +++ + + + A +K+++ I PN
Sbjct: 230 ISLACEIFQKMK-ERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPN 279
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 194/557 (34%), Positives = 302/557 (54%), Gaps = 61/557 (10%)
Query: 19 ILERCNHINHLKQLQSFLTTLG-QSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT---- 73
+L+ C + LK + S L+T G T + +L+ + KL +L AR +FDH
Sbjct: 31 LLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYS-KLGDLHSARTLFDHRHHHHH 89
Query: 74 ----TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
PN++L M+ AYA+ + A LY M R G N F YP VLK C L
Sbjct: 90 GHTQAPNSFLCNTMLRAYAN-AGRSYEAIDLYIYMQRMG-VGVNNFTYPFVLKVCASELG 147
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
+ ++VH Q+V++GF VE ALV+ Y++ G +IG A ++FD M R+VV WTAMI+
Sbjct: 148 AVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCG-EIGDAHEVFDRMLIRDVVCWTAMIT 206
Query: 190 GYTR-----------------------------------VGD----IKNAASLFDSMPDR 210
Y + +GD I A +FD M +R
Sbjct: 207 LYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEER 266
Query: 211 DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK 270
+ +WNS+++G TQNG +DA+S F +M D PN VT + +SA + G LG+
Sbjct: 267 NGISWNSMLSGYTQNGRPTDALSLFNQMQASECD---PNPVTALIMVSACSYLGSKHLGR 323
Query: 271 VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS--KKRLTSWNSMINSFAL 328
+H +V + +D+D+ + NA++DMY KCG L A F+ ++ ++SWN +I+ + +
Sbjct: 324 KLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGV 383
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
HG + ++ +F M Q + P+ +TF S+L+AC+H GL+++GR F MTK + P
Sbjct: 384 HGHGKEALELFSRM---QVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKL-SVRP 439
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL 448
+++HY C+VD+LGRAG EA ++K + P + VWG+LL C+I+G T+ E A L
Sbjct: 440 EMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNL 499
Query: 449 IEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSL 508
+++P + GY ++++NIY KW EV VR+ +K R K S IE +VH FH+
Sbjct: 500 FQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTA 559
Query: 509 DKTHPRTEEIYDALESM 525
D++ P E+Y +ES+
Sbjct: 560 DQSSPYYREVYRKVESL 576
>gi|449477795|ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 281/514 (54%), Gaps = 41/514 (7%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHL 72
+ +LA+L+ CN + L+++ + + G A KL+ FC + +S +L YA+ +F +
Sbjct: 5 KAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQM 64
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
P T + ++I +A Q + A Y MV P+ F + VLK+C + R
Sbjct: 65 ECPQTEAWNSIIRGFA-QSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKAERK 123
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
K VH +++ G+ D +V+ T ++ Y+
Sbjct: 124 CKEVHGSVIRCGY--------------------------------DADVIVCTNLVKCYS 151
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
+G + A +FD MP RD+ AWN++I+ +Q GL +A+ + +M S+N+ + T
Sbjct: 152 AMGLVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEALQTYNQMR---SENVDVDGFT 208
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
LV +S+ H G L +G +H + NGLD ++ NALIDMY KCGSL +A FDR
Sbjct: 209 LVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNALIDMYAKCGSLDQAILIFDRMQ 268
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+K + +WNSMI + +HG+ +I F++M+ + I+P+ VTF+ LL C+H GLV++
Sbjct: 269 RKDIFTWNSMIVGYGVHGRGSEAIYCFQQML---EARIQPNPVTFLGLLCGCSHQGLVQE 325
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G YF LM+ +R++P+++HYGCLVDL GRAG+ ++ALE+V D V+W LL C
Sbjct: 326 GVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNSS-HNDSVLWRILLGSC 384
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
KI+ E A+ +L E+ + G I+LA IY V ++RKM+K + TPG
Sbjct: 385 KIHKNVTIGEIAMNRLSELGATSAGDCILLATIYAGEKDKAGVARMRKMIKSQGKKTTPG 444
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
SWIE+ +QVH+F DK+H + E+Y+ L ++
Sbjct: 445 WSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVI 478
>gi|90265157|emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group]
Length = 530
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/474 (35%), Positives = 270/474 (56%), Gaps = 11/474 (2%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L + +AR +FD + TAM A+ + A+ A +++ DMV G P+
Sbjct: 58 LGSPDHARRLFDEMPEQGLVPRTAMARAHVAS-GQAAQAIAVFGDMVADGV-FPDNVAVA 115
Query: 119 HVLKSCPDV----LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
L +C KM+H +V SG V T L+ Y SG ++ ++R++FD
Sbjct: 116 VALGACHGAGSWTARRNPGKMIHALVVTSGIVPDVFVSTELIRVYGESG-ELPVSRRVFD 174
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
+M R+ ++W AM+ Y R G + A +F +MP RDV +WN+V+AG G +A+
Sbjct: 175 DMPSRSTITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGL 234
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
FR+M S + PN T+ L A G L+ G +H Y+ RN ++ D ++ LIDM
Sbjct: 235 FRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDM 294
Query: 295 YGKCGSLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
Y KCGS+ A + F++ +K+ L SW ++I A+HG++ +++ +F+ M QD+ I PD
Sbjct: 295 YCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMM---QDNGICPD 351
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
VT + +LNAC HGGLV++G YF M +RI P+IEHYGC++DLLGR GR +EA ++
Sbjct: 352 DVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMI 411
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
+ M ++P+ V+WG+ L+ CK++G + + A ++L +DP++ +ML+++Y + W
Sbjct: 412 RTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWI 471
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+ + R+ + KTPGCS IE+ +VH+F + HP+ EI L+ + A
Sbjct: 472 GLARERREMNSMQVKKTPGCSSIELKGEVHEFVAGGSQHPQYAEICSVLQDVEA 525
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 131/289 (45%), Gaps = 39/289 (13%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
TA++S Y +G +A LFD MP++ + ++ +G + AI+ F M V+D
Sbjct: 49 TALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDM---VAD 105
Query: 245 NIRPNQVTLVCALSAIGHTGMLQL----GKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ P+ V + AL A G GK+IH V +G+ D F+S LI +YG+ G
Sbjct: 106 GVFPDNVAVAVALGACHGAGSWTARRNPGKMIHALVVTSGIVPDVFVSTELIRVYGESGE 165
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQ-----------------SENSI----CV- 338
L +RR FD + +WN+M++ +A HG+ S N++ CV
Sbjct: 166 LPVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVA 225
Query: 339 ---------FEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
F +M+ + P+ T ++L AC G +E G + + R+
Sbjct: 226 GRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETG-IWVHAYIERNRMNDD 284
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
CL+D+ + G + AL+V + + D W +++ G ++GRT
Sbjct: 285 GYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLAMHGRT 333
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 9/193 (4%)
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGL-DLDSFISNALIDMYGKCGSLKEARRAFDRN 311
L+ +LS H L IH + + GL + + + AL+ Y GS ARR FD
Sbjct: 13 LIKSLSPAVHGAHLS-ASSIHCLLLKAGLLHVGAHLPTALLSAYAALGSPDHARRLFDEM 71
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
++ L +M + GQ+ +I VF +M+ + PD V L AC G
Sbjct: 72 PEQGLVPRTAMARAHVASGQAAQAIAVFGDMVA---DGVFPDNVAVAVALGACHGAGSWT 128
Query: 372 QGRAYFKL---MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
R K+ + T I P + L+ + G +G + V M + W ++
Sbjct: 129 ARRNPGKMIHALVVTSGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSR-STITWNAM 187
Query: 429 LNGCKIYGRTDFA 441
L+ +G+ D A
Sbjct: 188 LHQYARHGKVDTA 200
>gi|255581953|ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528611|gb|EEF30631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/474 (35%), Positives = 274/474 (57%), Gaps = 13/474 (2%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAY--ASQPAHASSAFSLYRDMVRRGQPQPNQ 114
+ +S ++YAR IF+ + + ++Y MI +P + F+ + G +P+
Sbjct: 32 VTMSEISYARSIFERIPYLDVFVYNTMIRGLMLGKRPYDSLLLFN----ELLLGCLKPDN 87
Query: 115 FIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
+ Y VLK+C + K VH QI+K+G + ++L++ Y+ SG+ I A +
Sbjct: 88 YTYTFVLKACSNQKALPEGKQVHCQIIKAGISPNTHIHSSLIHMYTSSGS-IVEAECVLR 146
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
E S+ N ++ +MISGY G + A ++FD M +DV +W+++I GCT+NG+ ++A++
Sbjct: 147 EFSEENTLAKNSMISGYLSKGHVDKARAMFDQMKAKDVASWSAIITGCTKNGMHTEALAL 206
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
F M + + PN+ LV LSA H G L G+ IH Y+ R G D+ +S ALIDM
Sbjct: 207 FEDM---MVSHTLPNESALVSLLSACAHLGALHQGRWIHAYIDRIGADMSIRLSTALIDM 263
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KCG ++ + F + ++ + +W ++I+ FA++GQ++ +FEEM+ I P+G
Sbjct: 264 YAKCGDIQSGYKFFRKMPRRDIVTWGAIISGFAIYGQAKKCFELFEEMLA---DGIYPNG 320
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
V F+++L+AC+H G VE+G+ YF M I P IEHYGC+VDLLGRAGR +EA E +
Sbjct: 321 VIFVAILSACSHAGYVEEGKLYFNQMMVDLGIRPSIEHYGCMVDLLGRAGRLKEAEEFII 380
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M +P+ V+WGS+L+ C+ + + +A + LIE++P +G + ++G G+ E
Sbjct: 381 SMPEKPNSVIWGSMLSACRTHNDLNRGSWAFRHLIELEPRSGDRYKLAGLMFGNAGEKQE 440
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
K+RKM++D+ T G S+IEVD +H+F D H EIY + + L
Sbjct: 441 ATKIRKMIEDQGMETTSGSSFIEVDGTIHEFLVGDTIHNEAAEIYKVWKGLNGL 494
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/522 (34%), Positives = 287/522 (54%), Gaps = 44/522 (8%)
Query: 5 TNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTY 64
+N QT +L+ R N ++ + L G Q F A KL+ + +L +
Sbjct: 65 SNPTQQTCELLILSAARR-NSLSDALDVHQLLVDGGFDQDPFLATKLINMFS-ELDTVDN 122
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD Y++ A+ A A + LY M G ++F Y ++LK+C
Sbjct: 123 ARKVFDKTRKRTIYVWNALFRALA-LAGRGNDVLELYPRMNMMGVSS-DRFTYTYLLKAC 180
Query: 125 --PDVLES--RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
+ L S + K +H I++ G+ + V T L++ Y+R
Sbjct: 181 VASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYAR------------------- 221
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
G + A+++FD MP ++V +W+++IA +NG +A+ FR M +
Sbjct: 222 -------------FGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMML 268
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
D++ PN VT+V L A L+ GK+IH Y+ R GLD + +ALI MY +CG
Sbjct: 269 NTHDSV-PNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGK 327
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
L+ + FDR KK + WNS+I+S+ LHG +I +FEEM+ DH P ++FIS+
Sbjct: 328 LESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMI---DHGFSPSHISFISV 384
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L AC+H GLVE+G+ F+ M K + I+P +EHY C+VDLLGRA R +EA ++++ ++IEP
Sbjct: 385 LGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEP 444
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
VWGSLL C+I+ + AE A K+L +++P N G ++LA+IY E WDEV++V+K
Sbjct: 445 GPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKK 504
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+L R K PG SWIEV ++++ F S+D+ +P+ E+++ L
Sbjct: 505 LLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALL 546
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 78/197 (39%), Gaps = 19/197 (9%)
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+S P Q T + + L +H + G D D F++ LI+M+ + ++
Sbjct: 61 LSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTV 120
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
AR+ FD+ K+ + WN++ + AL G+ + V E R + D T+ LL
Sbjct: 121 DNARKVFDKTRKRTIYVWNALFRALALAGRGND---VLELYPRMNMMGVSSDRFTYTYLL 177
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG---------CLVDLLGRAGRFEEALEV 412
AC + K I I +G L+D+ R G A V
Sbjct: 178 KACV------ASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAV 231
Query: 413 VKGMKIEPDEVVWGSLL 429
M ++ + V W +++
Sbjct: 232 FDEMPVK-NVVSWSAMI 247
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 296/532 (55%), Gaps = 44/532 (8%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTY 78
I+++C+ L+ + + Q+Q + + + C+ + L A + PN +
Sbjct: 786 IIKQCSTPKLLESALAAMIKTSQTQNCYLMNQFITACS-SFNRLDLAVSFMTQMQKPNVF 844
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHT 138
+Y A+I + + +H + Y M+R P+ + Y ++++ S + +
Sbjct: 845 VYNALIKGFVT-CSHPIRSLEFYVRMLR-DSVSPSSYTYSSLVQA--SAFASGFGESLQA 900
Query: 139 QIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS--------- 189
I K GF + ++T L+ YS SG I ARK+FDEM +R+ V+WT M+S
Sbjct: 901 HIWKFGFGFHVQIQTTLIGFYSASGR-IREARKVFDEMPERDDVTWTTMVSAYRQVLDMD 959
Query: 190 ----------------------GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGL 227
GYTR+G+++ A SLF+ MP +D+ +W ++I G ++N
Sbjct: 960 SANSLANQMPEKNEATWNCLIDGYTRLGNLELAESLFNQMPVKDIISWTTMINGYSRNKR 1019
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
+ +AI+ F +M + + I P++VT+ +SA H G+L++GK +H Y +NG LD +I
Sbjct: 1020 YREAIAVFYKM---MEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTVQNGFVLDVYI 1076
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
+AL+DMY KCGSL+ A F KK L WNS+I A HG ++ ++ +F +M +
Sbjct: 1077 GSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKM---EM 1133
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE 407
+++P+ VTF+S+ ACTH GLVE+GR ++ M Y I +EHYGC+V L +AG
Sbjct: 1134 ESVKPNTVTFVSVFTACTHAGLVEEGRRIYRSMIDDYSIVSNVEHYGCMVHLFSKAGLIY 1193
Query: 408 EALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYG 467
EALE++ M+ EP+ V+WG+LL+GC+I+ + AE A KL+ ++P N GY +L ++Y
Sbjct: 1194 EALELIGSMEFEPNAVIWGALLDGCRIHKNLEIAEIAFNKLMILEPMNSGYYFLLVSMYA 1253
Query: 468 ELGKWDEVRKVRKMLKDRNAYKT-PGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
E +W +V ++R +++ K PG S I +DK+ H F + DK+H ++E+
Sbjct: 1254 EQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEV 1305
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/499 (35%), Positives = 266/499 (53%), Gaps = 35/499 (7%)
Query: 54 FCTL-KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM-------- 104
C L K + AR +FD + + N + AMI Y Q A L++ M
Sbjct: 242 LCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYV-QDLQVDEAVKLFKKMPHKDSVSW 300
Query: 105 -------VRRGQPQPNQFIYPHVLKSCPDVLESRG--TKMVHTQIVKSGFEQYP------ 149
+R G+ + +Y + C D+ + ++ + + +
Sbjct: 301 TTIINGYIRVGKLDEARQVYNQM--PCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHD 358
Query: 150 -VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP 208
V +++ YSRSG + A LF +M +N VSW MISGY + G + A +F +M
Sbjct: 359 VVCWNSMIAGYSRSGR-MDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMR 417
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
++++ +WNS+IAG QN L+ DA+ MG E +P+Q T C LSA + LQ+
Sbjct: 418 EKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKE---GKKPDQSTFACTLSACANLAALQV 474
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
G +H Y+ ++G D F+ NALI MY KCG ++ A + F L SWNS+I+ +AL
Sbjct: 475 GNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYAL 534
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
+G + + FE+M + PD VTFI +L+AC+H GL QG FK M + + IEP
Sbjct: 535 NGYANKAFKAFEQM---SSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEP 591
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL 448
EHY CLVDLLGR GR EEA V+GMK++ + +WGSLL C+++ + FA ++L
Sbjct: 592 LAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAERL 651
Query: 449 IEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSL 508
E++P+N I L+N++ E G+W+EV +VR +++ + A K PGCSWIEV Q+ F S
Sbjct: 652 FELEPHNASNYITLSNMHAEAGRWEEVERVRMLMRGKRAGKQPGCSWIEVQNQIQHFLSH 711
Query: 509 DKTHPRTEEIYDALESMVA 527
D R + I L ++ A
Sbjct: 712 DPAKLRPKNIQIILNTLAA 730
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 107/492 (21%), Positives = 196/492 (39%), Gaps = 118/492 (23%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYA--SQPAHASSAFSLY--RD----------MVRRGQP 110
AR +FD ++ N + MI Y + AS F + RD R+G+
Sbjct: 67 ARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITCYTRKGKL 126
Query: 111 QPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG--------FEQYPVVETALVNS---- 158
+ + +L+ PD L++ + K G FEQ P + NS
Sbjct: 127 EKAR----ELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAG 182
Query: 159 YSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSV 218
Y+++G + +A + F+ M++RNVVSW M++GY + GD+ +A LF+ +P+ + +W ++
Sbjct: 183 YTQNGK-MHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTM 241
Query: 219 IAGCTQNGLFSDAISFFRRMGME--------VSDNIRPNQVTLVCAL-SAIGHTGMLQLG 269
+ G + G ++A F RM + ++ ++ QV L + H +
Sbjct: 242 LCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWT 301
Query: 270 KVIHGYVYRNGLD--------------------LDSFISNALIDM--------------- 294
+I+GY+ LD + I N ID
Sbjct: 302 TIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVC 361
Query: 295 -------YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
Y + G + EA F + K SWN+MI+ +A GQ + + +F+ M ++
Sbjct: 362 WNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAM---RE 418
Query: 348 HNI-------------------------------RPDGVTFISLLNACTHGGLVEQGRAY 376
NI +PD TF L+AC + ++ G
Sbjct: 419 KNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQL 478
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
+ + K+ + L+ + + GR + A +V + ++ D + W SL++G + G
Sbjct: 479 HEYILKSGYMNDLFVG-NALIAMYAKCGRVQSAEQVFRDIEC-VDLISWNSLISGYALNG 536
Query: 437 RTDFAEFAVKKL 448
+ A A +++
Sbjct: 537 YANKAFKAFEQM 548
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 133/302 (44%), Gaps = 50/302 (16%)
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
A ++F M+ +N+V++ +MIS + I++A LFD M R++ +WN++IAG N +
Sbjct: 36 AIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMV 95
Query: 229 SDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHT--GMLQLGKVIHGYVYRNGLDLDSF 286
+A F ++ P + AL +T G L+ + + V LD+
Sbjct: 96 EEASELF---------DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK---LDTA 143
Query: 287 ISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQ 346
NA+I Y K G +A++ F++ K L S+NSM+ + +G+ ++ FE M
Sbjct: 144 CWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESM---T 200
Query: 347 DHNI---------------------------RPDGVTFISLLNACTHGGLVEQGRAYFKL 379
+ N+ P+ V+++++L G + + R F
Sbjct: 201 ERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDR 260
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
M + + ++ + + +EA+++ K M D V W +++NG G+ D
Sbjct: 261 MP-----SKNVVSWNAMIATYVQDLQVDEAVKLFKKMP-HKDSVSWTTIINGYIRVGKLD 314
Query: 440 FA 441
A
Sbjct: 315 EA 316
>gi|297824259|ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 542
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 172/502 (34%), Positives = 278/502 (55%), Gaps = 9/502 (1%)
Query: 22 RCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYT 81
RC+ + LKQ+ + L G A +++ FC S+ YA +F + N +++
Sbjct: 34 RCSTMRELKQIHANLIKTGLISDTVAASRVLAFCCASPSDRNYAYLVFTRINHKNPFVWN 93
Query: 82 AMITAYASQPAHASSAFSLYRDMVRRGQP-QPNQFIYPHVLKSCPDVLESRGTKMVHTQI 140
+I + S+ + A S++ DM+ +P + YP V K+ + +R + +H ++
Sbjct: 94 TIIRGF-SRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYASLGLARDGRQLHGRV 152
Query: 141 VKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
+K G E + +++ Y G + A +LF M +VV+W ++I G + G I A
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLVE-AWRLFVGMMGFDVVAWNSIIMGLAKCGLIDQA 211
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
LFD MP R+ +WNS+I+G +NG F DA+ FR M +++P+ T+V L+A
Sbjct: 212 QKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQ---ERDVKPDGFTMVSLLNAC 268
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
+ G + G+ IH Y+ RN +L+S + ALIDMY KCG +E + F+ K+L+ WN
Sbjct: 269 AYLGASEQGRWIHKYIVRNRFELNSIVITALIDMYCKCGCFEEGLKVFECAPTKQLSCWN 328
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
SMI A +G E ++ +F E+ R + PD V+FI +L AC H G V + +F+LM
Sbjct: 329 SMILGLANNGCEERAMDLFLELER---TGLEPDSVSFIGVLTACAHSGEVHKAGEFFRLM 385
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+ Y IEP I+HY C+V++LG AG +EA ++K M +E D ++W SLL C+ G +
Sbjct: 386 REKYMIEPSIKHYTCMVNVLGGAGLLDEAEALIKKMPVEGDTIIWSSLLAACRKNGNVEM 445
Query: 441 AEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDK 500
A+ A L +DP+ ++++N Y G ++E + R ++K+R K GCS IEVD
Sbjct: 446 AKRAANCLKNLDPDETCGYVLMSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDF 505
Query: 501 QVHQFHSLDKTHPRTEEIYDAL 522
+VH+F S K HP++ EIY L
Sbjct: 506 EVHEFVSCGKKHPKSTEIYSLL 527
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 172/462 (37%), Positives = 271/462 (58%), Gaps = 16/462 (3%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ FD + N + ++IT Y Q A A ++ M+ G +P++ V +C
Sbjct: 205 AQRAFDDMDVRNIVSWNSLITCY-EQNGPAGKALEVFVRMMNCG-IEPDEITLASVASAC 262
Query: 125 PDVLESRGTKMVHTQIVK-SGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
+ R +H +++K + V+ ALV+ Y++ + AR +FD M R+VVS
Sbjct: 263 ASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKC-RRVNEARLVFDRMPLRDVVS 321
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
T+M+SGY + +K A +F +M +R+V +WN++IAG TQNG +A+ F + E
Sbjct: 322 ETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRE-- 379
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGK------VIHGYVYRNGLDLDSFISNALIDMYGK 297
+I P T L+A + L+LG+ + HG+ +++G D D F+ N+LIDMY K
Sbjct: 380 -SIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMK 438
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG +++ R F+R ++ SWN+MI +A +G ++ +F EM+ + RPD VT
Sbjct: 439 CGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGE---RPDHVTM 495
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
I +L+AC+H GLVE+GR YF+ MT + + P +HY C+VDLLGRAG +EA +++ M
Sbjct: 496 IGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMP 555
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+EPD VVWGSLL CK++G ++ ++L+EIDP N G ++L+N+Y ELG+W +V +
Sbjct: 556 MEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVR 615
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
VRK ++ K PGCSWI + +H F DK HP ++IY
Sbjct: 616 VRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIY 657
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 182/374 (48%), Gaps = 11/374 (2%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ +L +C ++VH +I+K+ F ++ LV+ Y + G + ARK+FD M
Sbjct: 22 FAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGF-LEDARKVFDHM 80
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
RN SW A++ T+ G + A +LF MP+RD +WN++++G Q F +A+ F
Sbjct: 81 QQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVV 140
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M S++ N+ + ALSA L +G IHG + ++ LD ++ +AL+DMY
Sbjct: 141 DMH---SEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYS 197
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KC + A+RAFD + + SWNS+I + +G + ++ VF MM C I PD +T
Sbjct: 198 KCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNC---GIEPDEIT 254
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
S+ +AC + +G + K + + LVD+ + R EA V M
Sbjct: 255 LASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRM 314
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
+ D V S+++G A ++E N + ++A Y + G+ +E
Sbjct: 315 PLR-DVVSETSMVSGYAKASSVKAARLMFSNMME--RNVVSWNALIAG-YTQNGENEEAV 370
Query: 477 KVRKMLKDRNAYKT 490
++ +LK + + T
Sbjct: 371 RLFLLLKRESIWPT 384
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 180/445 (40%), Gaps = 115/445 (25%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQ------ 111
K L AR +FDH+ NT+ + A++ A A A +L++ M R Q
Sbjct: 66 KCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGA-LDEALNLFKCMPERDQCSWNAMVS 124
Query: 112 ------------------------PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQ 147
N++ + L +C +++ +H I KS +
Sbjct: 125 GFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSL 184
Query: 148 YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM 207
+ +ALV+ YS+ + A++ FD+M RN+VSW ++I+ Y
Sbjct: 185 DVYMGSALVDMYSKC-RVVASAQRAFDDMDVRNIVSWNSLITCY---------------- 227
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
QNG A+ F RM ++ I P+++TL SA ++
Sbjct: 228 ---------------EQNGPAGKALEVFVRM---MNCGIEPDEITLASVASACASLSAIR 269
Query: 268 LGKVIHGYV-----YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS---------- 312
G IH V YRN D + NAL+DMY KC + EAR FDR
Sbjct: 270 EGLQIHARVMKHDKYRN----DLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSM 325
Query: 313 ---------------------KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIR 351
++ + SWN++I + +G++E ++ +F + R +I
Sbjct: 326 VSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKR---ESIW 382
Query: 352 PDGVTFISLLNACTHGGLVEQGR-AYFKLMTKTYRI----EPQIEHYGCLVDLLGRAGRF 406
P TF +LLNAC + ++ GR A+ ++ + + I L+D+ + G
Sbjct: 383 PTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLV 442
Query: 407 EEALEVVKGMKIEPDEVVWGSLLNG 431
E+ V + M +E D V W +++ G
Sbjct: 443 EDGRLVFERM-LERDNVSWNAMIVG 466
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/449 (37%), Positives = 264/449 (58%), Gaps = 10/449 (2%)
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
++AM++ Y Q A L+ +M G + L +C VL + VH
Sbjct: 238 WSAMVSCY-EQNEMGEEALVLFVEMKGSGVAVDEVVVVS-ALSACSRVLNVEMGRWVHGL 295
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR-NVVSWTAMISGYTRVGDIK 198
VK G E Y ++ AL++ YS G +I AR++FD+ + +++SW +MISGY R G I+
Sbjct: 296 AVKVGVEDYVSLKNALIHLYSSCG-EIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQ 354
Query: 199 NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
+A LF SMP++DV +W+++I+G Q+ FS+A++ F+ M + +RP++ LV A+S
Sbjct: 355 DAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLH---GVRPDETALVSAIS 411
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
A H L LGK IH Y+ RN L ++ +S LIDMY KCG ++ A F +K +++
Sbjct: 412 ACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVST 471
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
WN++I A++G E S+ +F +M + P+ +TF+ +L AC H GLV GR YF
Sbjct: 472 WNAVILGLAMNGSVEQSLNMFADMKKT---GTVPNEITFMGVLGACRHMGLVNDGRHYFN 528
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
M ++IE I+HYGC+VDLLGRAG +EA E++ M + PD WG+LL C+ +
Sbjct: 529 SMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDN 588
Query: 439 DFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV 498
+ E +KLI++ P++ G+ ++L+NIY G W V ++R ++ KTPGCS IE
Sbjct: 589 EMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEA 648
Query: 499 DKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+ VH+F + DKTHP+ +I L+ + A
Sbjct: 649 NGTVHEFLAGDKTHPQINDIEHMLDVVAA 677
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 225/486 (46%), Gaps = 71/486 (14%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT--LKLSNLTYARFIFDHLTTP 75
++L+ C H KQL S G + A +L+ F + L Y+ IF+HL P
Sbjct: 8 SLLQSCKCPRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNP 67
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
NT+ + ++ A+ A Y+ + +P+ + YP +L+ C + +
Sbjct: 68 NTFTWNTIMRAHLYLQNSPHQALLHYK-LFLASHAKPDSYTYPILLQCCAARVSEFEGRQ 126
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+H V SGF+ V L+N Y+ G+ +G AR++F+E ++VSW +++GY + G
Sbjct: 127 LHAHAVSSGFDGDVYVRNTLMNLYAVCGS-VGSARRVFEESPVLDLVSWNTLLAGYVQAG 185
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIA-----GCTQ------NGL---------FSDAISFF 235
+++ A +F+ MP+R+ A NS+IA GC + NG+ +S +S +
Sbjct: 186 EVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCY 245
Query: 236 RR--MGMEV--------SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
+ MG E + ++V +V ALSA +++G+ +HG + G++
Sbjct: 246 EQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYV 305
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNS--------------------------------K 313
+ NALI +Y CG + +ARR FD +
Sbjct: 306 SLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPE 365
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K + SW++MI+ +A H ++ +F+EM Q H +RPD +S ++ACTH ++ G
Sbjct: 366 KDVVSWSAMISGYAQHECFSEALALFQEM---QLHGVRPDETALVSAISACTHLATLDLG 422
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
+ +++ +++ + L+D+ + G E ALEV M+ E W +++ G
Sbjct: 423 KWIHAYISRN-KLQVNVILSTTLIDMYMKCGCVENALEVFYAME-EKGVSTWNAVILGLA 480
Query: 434 IYGRTD 439
+ G +
Sbjct: 481 MNGSVE 486
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/585 (31%), Positives = 295/585 (50%), Gaps = 93/585 (15%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL-------------KLSNLT 63
L +L C + +KQ+ + + +++ ++ CT + NL
Sbjct: 30 LLLLSSCKSVREIKQIHASIIKANTTRST-TTLPIISLCTKITSLLQQDVHLADSIQNLW 88
Query: 64 YARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
YA + + Y++ A+I + ++ + FSLYR M+ G P+ + P++LK+
Sbjct: 89 YASSLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGL-SPDTYTLPYLLKA 147
Query: 124 CPDVLESRGTKMVHTQIVKSG---------------------------FEQYP----VVE 152
C +H +K+G F+Q P +
Sbjct: 148 CSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISW 207
Query: 153 TALVNSYSRSG-------------------------------NDIGIARK--------LF 173
T L+ +YS+ G D + +K LF
Sbjct: 208 TTLIQAYSKMGYPSEAIAAFFRMNCTADRMTLVVVLSACSQLGDFTLGKKILAYMDHHLF 267
Query: 174 DEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
D SD V A++ Y + G A LF MP +++ +WNS+I+G GLF +A+
Sbjct: 268 DVHSD--VFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALH 325
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
FRRM + ++P+ VTLV L++ + G L+LGK +H Y+ +N + D +++NAL+D
Sbjct: 326 MFRRMQ---TMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVD 382
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
MY KCGS+ +A F K + S+ +MI FA+HG+++ ++ +F EM R +RPD
Sbjct: 383 MYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRM---GVRPD 439
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
VT + +L+AC+H GL+E+GR +F+ M++ Y ++PQ EHYGC+VDLLGRAG EA
Sbjct: 440 HVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRAGLISEAEAFT 499
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
M I PD VWGSLL CKI+ + + E ++KLIE++P G I+++NIY +W
Sbjct: 500 NKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEMEPERDGAYILMSNIYSSANRWR 559
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
+ K RK +K N KTPGCS IEVD VH+F +K+HP++ E+
Sbjct: 560 DALKWRKAMKQNNIKKTPGCSSIEVDGMVHEFRKGEKSHPKSREM 604
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 269/467 (57%), Gaps = 14/467 (2%)
Query: 60 SNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP-QPNQFIYP 118
+NL Y+ I D P + +MI AY S+ +F Y +++ P+ + +
Sbjct: 57 TNLLYSNQILDQCAKPTLFALNSMIRAY-SKSLTPHKSFQFYNKILQSNDVMSPDNYTFN 115
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
++++C G VH ++K GFE P VE+ L+ Y+ + + ++F+ +
Sbjct: 116 FLVRTCAQSACEAGPA-VHGALIKHGFEYDPHVESGLIFMYAEM-SCLSSCHRVFESVQK 173
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
++V T M+S + GDI A +LFDSMP RD +WN++IAG Q G +A++ F+ M
Sbjct: 174 PDLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLM 233
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
M D ++ N+V+++ ++A H G L GK H Y+ +N + + + AL+DMY KC
Sbjct: 234 QM---DGVKVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKC 290
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G++ A + F ++K + +W++ I A++G + + +F M + I P+ +TFI
Sbjct: 291 GNVDRALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFM---KHEGIAPNEITFI 347
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
S+L C+ G V++GR++F M + + IEP++EHYGC+VDL GRAGR EEAL + M +
Sbjct: 348 SVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPL 407
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
+P WG+LLN C++Y + EFA +KLIE++ N G + L+NIY + G WD V V
Sbjct: 408 KPHAGAWGALLNACRMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNV 467
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
R+ +K K PGCS +EV+ +VH+F S DK+HP YD +E+M
Sbjct: 468 RQSMKAEGISKLPGCSVMEVNGEVHEFFSGDKSHPS----YDVIETM 510
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 182/563 (32%), Positives = 298/563 (52%), Gaps = 48/563 (8%)
Query: 3 SVTNQLNQTLNQQVLA-ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN 61
S+ + N L ++L +L++ I LK + S + L + KL+R +
Sbjct: 24 SLVSPQNPVLVLELLGKVLDQYPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAAR-GE 82
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
AR +FD + N Y MI +Y + + A ++RDMV G P+ + YP VL
Sbjct: 83 PGLARNVFDVIPERNVIFYNVMIRSYMNNHLY-DDALLVFRDMVSGGF-SPDHYTYPCVL 140
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
K+C R +H + K G + V L+ Y + G + AR + DEM ++V
Sbjct: 141 KACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGC-LPEARCVLDEMQSKDV 199
Query: 182 VSWTAMISGYTR-----------------------------VGDIKNAAS--------LF 204
VSW +M++GY + + + N +S +F
Sbjct: 200 VSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENVLYVEEMF 259
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
++ + + +WN +I+ +N + ++ + +MG + P+ +T L A G
Sbjct: 260 MNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMG---KCEVEPDAITCASVLRACGDLS 316
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
L LG+ IH YV R L + + N+LIDMY +CG L++A+R FDR + + SW S+I+
Sbjct: 317 ALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLIS 376
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
++ + GQ N++ +F EM Q+ PD + F+++L+AC+H GL+ +G+ YFK MT Y
Sbjct: 377 AYGMTGQGYNAVALFTEM---QNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDY 433
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
+I P IEH+ CLVDLLGR+GR +EA ++K M ++P+E VWG+LL+ C++Y D A
Sbjct: 434 KITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILA 493
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
KL+++ P GY ++L+NIY + G+W EV +R ++K R K PG S +E++ QVH
Sbjct: 494 ADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHT 553
Query: 505 FHSLDKTHPRTEEIYDALESMVA 527
F + D HP+++EIY+ L +V
Sbjct: 554 FLAGDTYHPQSKEIYEELSVLVG 576
>gi|125546973|gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/474 (35%), Positives = 270/474 (56%), Gaps = 11/474 (2%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L + +AR +FD + TAM A+ + A+ A +++ DMV G P+
Sbjct: 58 LGSPDHARRLFDEMPEQGLVPRTAMARAHVAS-GQAAQAIAVFGDMVADGV-FPDNVAVA 115
Query: 119 HVLKSCPDV----LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
L +C KM+H +V SG V T L+ Y SG ++ ++R++FD
Sbjct: 116 VALGACHGAGSWTARRNPGKMIHALVVTSGIVPDVFVSTELIRVYGESG-ELPVSRRVFD 174
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
+M R+ ++W AM+ Y R G + A +F +MP RDV +WN+V+AG G +A+
Sbjct: 175 DMPSRSTITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGL 234
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
FR+M S + PN T+ L A G L+ G +H Y+ RN ++ D ++ LIDM
Sbjct: 235 FRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDM 294
Query: 295 YGKCGSLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
Y KCGS+ A + F++ +K+ L SW ++I A+HG++ +++ +F+ M QD+ I PD
Sbjct: 295 YCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMM---QDNGICPD 351
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
VT + +LNAC HGGLV++G YF M +RI P+IEHYGC++DLLGR GR +EA ++
Sbjct: 352 DVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRIGRLQEAYSMI 411
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
+ M ++P+ V+WG+ L+ CK++G + + A ++L +DP++ +ML+++Y + W
Sbjct: 412 RTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWI 471
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+ + R+ + KTPGCS IE+ +VH+F + HP+ EI L+ + A
Sbjct: 472 GLARERREMNSMQVKKTPGCSSIELKGEVHEFVAGGSQHPQYAEICSVLQDVEA 525
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 131/289 (45%), Gaps = 39/289 (13%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
TA++S Y +G +A LFD MP++ + ++ +G + AI+ F M V+D
Sbjct: 49 TALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDM---VAD 105
Query: 245 NIRPNQVTLVCALSAIGHTGMLQL----GKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ P+ V + AL A G GK+IH V +G+ D F+S LI +YG+ G
Sbjct: 106 GVFPDNVAVAVALGACHGAGSWTARRNPGKMIHALVVTSGIVPDVFVSTELIRVYGESGE 165
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQ-----------------SENSI----CV- 338
L +RR FD + +WN+M++ +A HG+ S N++ CV
Sbjct: 166 LPVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVA 225
Query: 339 ---------FEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
F +M+ + P+ T ++L AC G +E G + + R+
Sbjct: 226 GRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETG-IWVHAYIERNRMNDD 284
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
CL+D+ + G + AL+V + + D W +++ G ++GRT
Sbjct: 285 GYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLAMHGRT 333
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 9/193 (4%)
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGL-DLDSFISNALIDMYGKCGSLKEARRAFDRN 311
L+ +LS H L IH + + GL + + + AL+ Y GS ARR FD
Sbjct: 13 LIKSLSPAVHGAHLS-ASSIHCLLLKAGLLHVGAHLPTALLSAYAALGSPDHARRLFDEM 71
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
++ L +M + GQ+ +I VF +M+ + PD V L AC G
Sbjct: 72 PEQGLVPRTAMARAHVASGQAAQAIAVFGDMVA---DGVFPDNVAVAVALGACHGAGSWT 128
Query: 372 QGRAYFKL---MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
R K+ + T I P + L+ + G +G + V M + W ++
Sbjct: 129 ARRNPGKMIHALVVTSGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSR-STITWNAM 187
Query: 429 LNGCKIYGRTDFA 441
L+ +G+ D A
Sbjct: 188 LHQYARHGKVDTA 200
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/515 (34%), Positives = 283/515 (54%), Gaps = 10/515 (1%)
Query: 6 NQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTY 64
+ L + ++++E C + LKQ+ + L G + V L +NL Y
Sbjct: 2 SSLRCIVKHPTISMVEPCTTLRELKQIHTQLLINGLLNDPQLVGQFVASIALNNPNNLHY 61
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLY-RDMVRRGQPQPNQFIYPHVLKS 123
+ + D+ P + + +MI A+ S+ + +F Y R + G P+ + + ++++
Sbjct: 62 SNQVLDNSQNPTLFTFNSMIRAH-SKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRT 120
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
+L VH VK GFE P V++ L+ Y+ G + ++F + + ++V
Sbjct: 121 SAQLLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGG-LDACHRVFSSICEPDLVC 179
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
TAM+S ++GD+ A LFD M +D AWN++I+G Q G +A+S F M E
Sbjct: 180 QTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQRE-- 237
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
++ N+V++V LSA H G L G+ H Y+ RN L + + ALIDMY KCG++ +
Sbjct: 238 -GVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNK 296
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A F +K + +W+S I A++G E + +F M + +++P+ +TF+S+L
Sbjct: 297 AMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLM---KQDSVQPNEITFVSVLRG 353
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C+ GLVE+GR +F+ M+K Y IEP++EHYGC+VDL GRAG +EAL + M + P
Sbjct: 354 CSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVG 413
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
WG+LLN CKIY + E A +K++E++ N G ++L+NIY + WD V VR+ +
Sbjct: 414 AWGALLNACKIYRNMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMN 473
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
+ K PGCS IEV +VH+F DK+HPR EI
Sbjct: 474 VKGVRKQPGCSVIEVGGEVHEFFVGDKSHPRYAEI 508
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/465 (36%), Positives = 264/465 (56%), Gaps = 9/465 (1%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
+T AR +FD ++ + +MI Y S+ + A ++R+M G +P+ F +L
Sbjct: 185 ITSARRVFDDISERTLVSWNSMINGY-SKMGRSEEAVLMFREMQEVGL-EPDVFTLVGLL 242
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+ VH +V +G E +V AL++ Y++ GN + A+ +FD+M D++V
Sbjct: 243 SVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGN-LKCAKSVFDQMLDKDV 301
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
VSWT MI+ Y G I A F+ MP ++V +WNS+I Q GL+++A+ F RM
Sbjct: 302 VSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRM--- 358
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+ N TLV LS+ H G L LGK H Y++ N + L + + NA+IDMY KCG+L
Sbjct: 359 CDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGAL 418
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+ A F +K SWN +I + ALHG + +I +FE+M Q + PD +TF LL
Sbjct: 419 QTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKM---QASGVCPDEITFTGLL 475
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
+AC+H GLV+ G+ YF++M T+ I P +EHY C+VDLLGR G EA+ ++K M ++PD
Sbjct: 476 SACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPD 535
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
VVW +LL C+ YG + +K+L+E+ N G ++L+N+Y E +WD+++ + K+
Sbjct: 536 VVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSESQRWDDMKNIWKI 595
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
L K S+IE+D +QF DK H + IY L ++
Sbjct: 596 LDQNGIKKCRAISFIEIDGCCYQFMVDDKRHGASTSIYSMLGQLM 640
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 216/463 (46%), Gaps = 70/463 (15%)
Query: 3 SVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNL 62
++ +L +Q + ++++C + LK + + + G + KLV +++L +L
Sbjct: 26 TILQELKSPTHQTLHYLIDQCISLKQLKHVHAQIILHGLATQVLTLGKLVS-SSVQLRDL 84
Query: 63 TYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
YA +FD + PN +++ +I Y S + + LYR MV G PNQF P VLK
Sbjct: 85 RYAHKLFDQIPQPNKFMFNHLIKGY-SNSSDPIKSLLLYRRMVCDG-ILPNQFTIPFVLK 142
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
+C VH Q K G + V+ A++N Y G I AR++FD++S+R +V
Sbjct: 143 ACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGL-ITSARRVFDDISERTLV 201
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
SW +MI+GY+++G + A +F M + +G+E
Sbjct: 202 SWNSMINGYSKMGRSEEAVLMFREM----------------------------QEVGLE- 232
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
P+ TLV LS G LG+ +H ++ G+++DS ++NAL+DMY KCG+LK
Sbjct: 233 -----PDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLK 287
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM-------------------- 342
A+ FD+ K + SW MIN++A HG + ++ F +M
Sbjct: 288 CAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGL 347
Query: 343 --------MRCQDHNIRPDGVTFISLLNACTHGGLVEQGR-AYFKLMTKTYRIEPQIEHY 393
R D + + T +++L++C+H G + G+ A+ + + +
Sbjct: 348 YAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATL--C 405
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
++D+ + G + A++V GM E + V W ++ ++G
Sbjct: 406 NAIIDMYAKCGALQTAMDVFFGMP-EKNAVSWNVIIGALALHG 447
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 135/265 (50%), Gaps = 11/265 (4%)
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
V++ ++S ++ D++ A LFD +P + +N +I G + + ++ +RRM
Sbjct: 68 VLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRM-- 125
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
V D I PNQ T+ L A LG +H ++ G+ + + NA++++Y CG
Sbjct: 126 -VCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGL 184
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+ ARR FD S++ L SWNSMIN ++ G+SE ++ +F EM Q+ + PD T + L
Sbjct: 185 ITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREM---QEVGLEPDVFTLVGL 241
Query: 361 LNACTHGGLVEQGR-AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
L+ T G + GR + ++ I+ + + L+D+ + G + A V M ++
Sbjct: 242 LSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTN--ALMDMYAKCGNLKCAKSVFDQM-LD 298
Query: 420 PDEVVWGSLLNGCKIYGRTDFA-EF 443
D V W ++N +G D A EF
Sbjct: 299 KDVVSWTCMINAYANHGLIDCALEF 323
>gi|125541284|gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indica Group]
Length = 493
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/417 (41%), Positives = 247/417 (59%), Gaps = 12/417 (2%)
Query: 110 PQPNQFIYPHVLKSCPDV----LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGND 165
P PN VL +C D L R VH +++K F + ++ T LV Y S
Sbjct: 63 PVPNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFAS-RL 120
Query: 166 IGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQN 225
+A +LFD M R+ V++ +ISG R G + A +FD MP D +W ++I GC +N
Sbjct: 121 PHLALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKN 180
Query: 226 GLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
G +AI+ FR M + D + P+ VTL+ +SA G L LG +H V R GL+ +
Sbjct: 181 GRHDEAINCFRAM---LLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNV 237
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
I+N+LIDMY +CG ++ AR+ F K+ + SWNSMI FA +G+ +++ FE M R
Sbjct: 238 RIANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRR- 296
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
+PD VTF +L AC+HGGL ++G Y+ LM Y I ++EHYGC+VDLLGR+GR
Sbjct: 297 --EGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGR 354
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANI 465
EEA+ VV M + P+EVV G+LL GC+++G AE ++ L+E+DP ++L+NI
Sbjct: 355 LEEAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNI 414
Query: 466 YGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
Y +GKWD KVR ++K R K PG S +E+D VH+F S D++HP+ EEI L
Sbjct: 415 YAAVGKWDGAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQML 471
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 115/273 (42%), Gaps = 33/273 (12%)
Query: 180 NVVSWTAMISGYTRVGD---IKNAASLFDSMPDRDVP---AWNSVIAGCTQNGLFSDAIS 233
+V SWT+ I+ + GD A S S P VP +V++ C S +
Sbjct: 29 DVASWTSAIARPAKQGDLPAAAAALSAMLSSPAAPVPNDVTLLTVLSACAD----SPSSP 84
Query: 234 FFRRMGMEVSDNIR---PNQVTLVCAL------SAIGHTGMLQLGKVIHGYVYRNGLDLD 284
RR+ + V + P+ + L L S + H + ++ R+ + +
Sbjct: 85 LARRLALSVHARVLKLFPSHLLLSTCLVRFYFASRLPHLAL----QLFDAMPVRSAVTYN 140
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
+ IS + + G + A FD SW ++I+ +G+ + +I F M+
Sbjct: 141 TVISGLM-----RNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAINCFRAMLL 195
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
+ PD VT I++++AC G + G +L+ + +E + L+D+ R G
Sbjct: 196 ---DGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQ-GLERNVRIANSLIDMYARCG 251
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
+ E A +V GM+ + V W S++ G GR
Sbjct: 252 QVELARQVFSGMR-KRTVVSWNSMIVGFAANGR 283
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/447 (38%), Positives = 261/447 (58%), Gaps = 14/447 (3%)
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT--KMV 136
L +A+I A H ++RR P +Y P L R +
Sbjct: 45 LVSALILASLRLVPHPQQTSDHAAALLRRVHPS----VYLRAAARLPSHLLRRSLLGPQL 100
Query: 137 HTQIVKSGFEQYPV-VETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
H+ ++++G V +LV Y + + AR +F EM+ R+VV+W MI+GY + G
Sbjct: 101 HSLLLRTGHVASDTHVSASLVQLYC-TCRHVADARSVFHEMAVRDVVAWNVMIAGYVKAG 159
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
D+ +A LFD+MP+R+V +W +VI G Q +A+ FRRM +E I P+ V L+
Sbjct: 160 DLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVE---GIEPDGVALLS 216
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
LSA G G + LG+ +H +V R GL + + N++IDMY KCG +++A F+ +K
Sbjct: 217 VLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKS 276
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
+ +W ++I FALHG ++ +F M R N+ P+ VTF+++L+AC+H GL + GR
Sbjct: 277 VVTWTTLIAGFALHGLGLQAVEMFRRMER---ENMAPNDVTFLAILSACSHVGLTDLGRW 333
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
YF +M YRI+PQ+EHYGC+VDLLGRAG +EA ++VK M ++ + +WG+LL + +
Sbjct: 334 YFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTH 393
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
G D E A+ LIE++P+N G I+L+NI+ E +WD+V K+RK +K+R PG S
Sbjct: 394 GDADLGEEALVHLIELEPSNSGNYILLSNIFAEQERWDDVSKLRKAMKERGLRNVPGASS 453
Query: 496 IEVDKQVHQFHSLDKTHPRTEEIYDAL 522
IEVD VH+F S D +HP +I + L
Sbjct: 454 IEVDGMVHEFTSRDGSHPFLHKICEVL 480
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 125/281 (44%), Gaps = 43/281 (15%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K +L +AR +FD + N +T +I YA Q A ++R M G +P+
Sbjct: 156 VKAGDLAHARELFDAMPERNVVSWTTVIGGYA-QMRRPEEAVEVFRRMQVEGI-EPDGVA 213
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
VL +C D+ + VH +V+ G Q + ++++ Y + G I A ++F+ M
Sbjct: 214 LLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGC-IEKAVEVFEGM 272
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+++VV+WT +I+G+ +GL A+ FR
Sbjct: 273 EEKSVVTWTTLIAGF-------------------------------ALHGLGLQAVEMFR 301
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV---YRNGLDLDSFISNALID 293
RM E N+ PN VT + LSA H G+ LG+ + YR ++ + ++D
Sbjct: 302 RMERE---NMAPNDVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPQVEHY--GCMVD 356
Query: 294 MYGKCGSLKEARRAF-DRNSKKRLTSWNSMINSFALHGQSE 333
+ G+ G LKEA+ D K W +++ + HG ++
Sbjct: 357 LLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGDAD 397
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/470 (35%), Positives = 267/470 (56%), Gaps = 11/470 (2%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L + A +F+++ + A+I Y +Q + A + M+ P++F
Sbjct: 241 LGRMDLALSLFENMPDRTIVSWNAVIAGY-NQNGLNAKALWFFSRMLSYSTMAPDEFTIT 299
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE--M 176
VL +C ++ K VH I++S V AL++ Y++SG+ + AR + + M
Sbjct: 300 SVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGS-VENARGVMQQAVM 358
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+D NV+S+TA++ GY ++GD+K+A +FD M +RDV AW ++I G QNG +A+ FR
Sbjct: 359 ADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFR 418
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M + PN T+ LS L+ GK IH R+ + S +SN+++ MY
Sbjct: 419 LM---IRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYA 475
Query: 297 KCGSLKEARRAFDR-NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
+ GSL ARR FDR + +K +W SMI + A HG E+++ +FEEM+R ++PD +
Sbjct: 476 RSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRV---GVKPDRI 532
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF+ +L+ACTH G V++G+ YF+ + + I P++ HY C+VDLL RAG F EA E ++
Sbjct: 533 TFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQ 592
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M +EPD + WGSLL+ C+++ D AE A +KL+ IDP N G L+N+Y G+W++
Sbjct: 593 MPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDA 652
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K+ K KD++ K G SW + +VH F + D HP+ + +Y M
Sbjct: 653 AKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKM 702
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 231/495 (46%), Gaps = 49/495 (9%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYA 88
++ + + +Q N + + + K L AR +F + + +T M+
Sbjct: 79 FREARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGL- 137
Query: 89 SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT-KMVHTQIVKSGFEQ 147
++ A ++ DMV G P QF +VL SC E+RG + VH+ +VK G
Sbjct: 138 NRVGRFGEAIKMFLDMVTDGL-SPTQFTLTNVLSSCA-ATEARGVGRKVHSFVVKLGLSS 195
Query: 148 YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM 207
V +++N Y + G D AR +F+ M +R+V SW AM+S +G + A SLF++M
Sbjct: 196 CVPVANSVLNMYGKCG-DAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENM 254
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
PDR + +WN+VIAG QNGL + A+ FF RM + S + P++ T+ LSA + GM+
Sbjct: 255 PDRTIVSWNAVIAGYNQNGLNAKALWFFSRM-LSYS-TMAPDEFTITSVLSACANLGMVS 312
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS--------------------------- 300
+GK +H Y+ R+ + ++NALI MY K GS
Sbjct: 313 IGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEG 372
Query: 301 ------LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
+K AR FD S + + +W +MI + +G ++ ++ +F M+R P+
Sbjct: 373 YVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIR---SGPEPNS 429
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
T ++L+ C +E G+ ++ + E +V + R+G A V
Sbjct: 430 YTVAAVLSVCASLACLEYGKQIHCKAIRSLQ-EQSSSVSNSIVTMYARSGSLPWARRVFD 488
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGY-GIMLANIYGELGK 471
+ + V W S++ +G + A ++++ + P+ + G++ A + +G
Sbjct: 489 RVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTH--VGF 546
Query: 472 WDEVRKVRKMLKDRN 486
DE ++ + L+D++
Sbjct: 547 VDEGKRYFQQLQDKH 561
>gi|222617104|gb|EEE53236.1| hypothetical protein OsJ_36137 [Oryza sativa Japonica Group]
Length = 542
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/522 (35%), Positives = 285/522 (54%), Gaps = 38/522 (7%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL--TTPNTYLYTAMITAY 87
+QL + L G A LV S+ +AR +FD + + N YL+TA I+AY
Sbjct: 28 RQLHAHLLIRGLPLPARAAVALVA----SSSSPRHARAVFDSVPAASANVYLWTATISAY 83
Query: 88 ASQPAH--------ASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPD-----VLESRGTK 134
A + A A +L+ M+ G P+PN F V+K C + +L +RG
Sbjct: 84 ARHASSSSSHALEVAGEAVALFALMLWSG-PRPNAFTVTSVIKCCLEGRAGLLLRARGRC 142
Query: 135 MVHT-------QIVKSGFEQYPV----VETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
+ + K G ++ PV V +V R+G D+G AR++FD M++R+ +S
Sbjct: 143 VARSVREYWPGGRCKEGVDEMPVKNVVVGNTMVACNVRAG-DMGAAREVFDGMAERDPIS 201
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
W ++SGY +GD LFD M R+V +WN++IA C++ G +D + F RM +
Sbjct: 202 WNTLMSGYLHLGDTATVRELFDEMTVRNVNSWNTMIAACSEEGSLADTVKVFNRMR---A 258
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
P+ T+ +SA G L + +HG + ++ ++++ + N+LIDMY KCG + +
Sbjct: 259 TGFEPDAATMAVLMSACAQLGSLTIAGQVHGLLQKSCVEMNCHVQNSLIDMYAKCGCISQ 318
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A+ F K S+N MI +FA HG + +++ +F M+ D ++PD VTF+ +L+A
Sbjct: 319 AQFLFTETYPKDTVSYNVMIIAFAQHGHARDALDLFNAMV---DSGLQPDAVTFLGVLSA 375
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C H GLVE G+ YF+LM TY ++ +HY C+VDL GRAG EEA VK M ++P
Sbjct: 376 CAHAGLVEYGKNYFELMKTTYAVQQSPDHYACVVDLYGRAGLIEEAHCFVKTMPVKPHAG 435
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
VWG+LLN C+ + D E A K+LI I+P N G ++L N +WD V V+ ++
Sbjct: 436 VWGALLNACRKHCHVDVGEIAAKELIRIEPKNPGNYVLLRNTLARGQQWDAVEDVQLSMR 495
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ KT GCSW+EVD VH+F + D HP+ +EIY LE +
Sbjct: 496 RKVIDKTAGCSWVEVDSVVHEFLAGDFYHPKFDEIYTILEHL 537
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 167/437 (38%), Positives = 254/437 (58%), Gaps = 13/437 (2%)
Query: 97 AFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALV 156
AFS++++M+ +P+ F VL +C D + R K +H Q + G + V ALV
Sbjct: 417 AFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALV 476
Query: 157 NSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR----DV 212
YS+ D+ A+ FDE+ +++V +W A+ISGYTR I+ L + M ++
Sbjct: 477 EMYSKC-QDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNI 535
Query: 213 PAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVI 272
WNS++AG +N + F M + +RP+ T+ L A L+ GK
Sbjct: 536 YTWNSILAGLVENRQLDLTMQLFSEMQIS---KLRPDIYTVGIILPACSRLATLERGKQA 592
Query: 273 HGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQS 332
H + + G D D I AL+DMY KCGSLK A+ A+DR S L S N+M+ + A+HG
Sbjct: 593 HAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHG 652
Query: 333 ENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEH 392
E I +F+ M+ PD VTF+S+L++C H G VE G +F LM Y ++P ++H
Sbjct: 653 EEGISLFQTMLAL---GFIPDHVTFLSVLSSCVHVGSVETGCEFFDLM-GYYNVKPTLKH 708
Query: 393 YGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
Y +VDLL R+G+ EA E++K M +E D V+WG+LL GC +G + E A ++LIE++
Sbjct: 709 YTSMVDLLSRSGQLHEAYELIKKMPVECDSVLWGALLGGCVTHGNIELGEIAAERLIELE 768
Query: 453 PNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTH 512
PNN G ++LAN++ +W ++ +VR M+KDR +K+PGCSWIE ++H F + D++H
Sbjct: 769 PNNSGNYVLLANLHAYARRWTDLARVRGMMKDRGMHKSPGCSWIEDKNEIHSFLACDRSH 828
Query: 513 PRTEEIYDALESMVALH 529
R EEIY L+ + ALH
Sbjct: 829 KRAEEIYATLDYL-ALH 844
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 121/490 (24%), Positives = 210/490 (42%), Gaps = 70/490 (14%)
Query: 9 NQTLNQQVLA-ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRF---CTLKLSNLTY 64
N+ LN A +L+ C KQ+ + G F KL++ C L L
Sbjct: 57 NKPLNTSKYASVLDSCKCPKLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGL----LKD 112
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A F+F+ + N + + A+++ Y AF L++ + G + + F++P V K+C
Sbjct: 113 ADFLFETMPMRNLHSWKAILSVYLDHGLF-EEAFLLFQVLQFDGV-ELDFFVFPLVFKAC 170
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ + +H ++K F V AL++ Y + G+ + A+K+ +M +R+ V+W
Sbjct: 171 SGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGS-LDDAKKVLVKMPERDSVTW 229
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRD-----VPAWNSVIAGCTQNGLFSDAISFFRRMG 239
++I+ G + A + M D V +W++VI G QNG +AI RM
Sbjct: 230 NSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQ 289
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
+E + PN TL L A L LGK +HGY+ R+ + + NAL+D+Y +CG
Sbjct: 290 VE---GLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCG 346
Query: 300 SLKEARRAFDRNSKKR-----------------------------------LTSWNSMIN 324
+ A + F + S K L SWNS+I+
Sbjct: 347 DMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIIS 406
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR-----AYFK- 378
+ + + + +F+ M+ + I PD T S+L AC + QG+ A K
Sbjct: 407 GYVRNFMFDEAFSMFQNML--MEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKG 464
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
L + T+ +E Y DL F+E + E D W +L++G +
Sbjct: 465 LQSDTFVGGALVEMYSKCQDLTAAQVAFDEVM--------EKDVPTWNALISGYTRSNQI 516
Query: 439 DFAEFAVKKL 448
+ ++ ++K+
Sbjct: 517 ERIQYLLEKM 526
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 8/191 (4%)
Query: 267 QLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSF 326
+LGK +H + + G D D FI L+ MY +CG LK+A F+ + L SW ++++ +
Sbjct: 76 KLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVY 135
Query: 327 ALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRI 386
HG E + +F+ + Q + D F + AC+ G VE GR L+ K +R
Sbjct: 136 LDHGLFEEAFLLFQVL---QFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIK-FRF 191
Query: 387 EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
I L+D+ G+ G ++A +V+ M E D V W S++ C G A ++
Sbjct: 192 CLNIYVSNALIDMYGKCGSLDDAKKVLVKMP-ERDSVTWNSVITACAANGMVYEALEFLE 250
Query: 447 KLIEID---PN 454
K+ +D PN
Sbjct: 251 KMKSLDYSMPN 261
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 84/217 (38%), Gaps = 54/217 (24%)
Query: 17 LAILERCN--HINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
LA LER H + +K +G + + YA K +L YA+ +D ++
Sbjct: 583 LATLERGKQAHAHSIKCGYDTDVHIGAALVDMYA---------KCGSLKYAQLAYDRISN 633
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
PN + AM+TA A H SL++ M+ G P+ + VL SC
Sbjct: 634 PNLVSHNAMLTACAMH-GHGEEGISLFQTMLALGFI-PDHVTFLSVLSSC---------- 681
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS----WTAMISG 190
VH V++G E FD M NV +T+M+
Sbjct: 682 -VHVGSVETGCE-------------------------FFDLMGYYNVKPTLKHYTSMVDL 715
Query: 191 YTRVGDIKNAASLFDSMP-DRDVPAWNSVIAGCTQNG 226
+R G + A L MP + D W +++ GC +G
Sbjct: 716 LSRSGQLHEAYELIKKMPVECDSVLWGALLGGCVTHG 752
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 164/508 (32%), Positives = 294/508 (57%), Gaps = 10/508 (1%)
Query: 13 NQQVLAILE-RCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
+Q L +L+ +C ++ L+++ + + G + A +++ FC ++ YA +F
Sbjct: 24 DQPCLTMLQTQCTNMKDLQKIHAHIIKTGLAHHTVAASRVLTFCASSSGDINYAYLLFTT 83
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ +PN Y + +I + S+ + A SL+ DM+ P + YP V K+ +
Sbjct: 84 IPSPNLYCWNTIIRGF-SRSSTPHLAISLFVDMLC-SSVLPQRLTYPSVFKAYAQLGAGY 141
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
+H ++VK G E+ ++ ++ Y+ SG + AR++FDE+ D +VV+ +MI G
Sbjct: 142 DGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGL-LSEARRVFDELVDLDVVACNSMIMGL 200
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
+ G++ + LFD+MP R WNS+I+G +N +A+ FR+M E + P++
Sbjct: 201 AKCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGE---RVEPSEF 257
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
T+V LSA H G L+ G+ +H YV R +L+ + A+IDMY KCG + +A F+ +
Sbjct: 258 TMVSLLSACAHLGALKHGEWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFEAS 317
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
+ L+ WNS+I AL+G +I F ++ + +++PD V+FI +L AC + G V
Sbjct: 318 PTRGLSCWNSIIIGLALNGYERKAIEYFSKL---EASDLKPDHVSFIGVLTACKYIGAVG 374
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ R YF LM Y IEP I+HY C+V++LG+A EEA +++KGM ++ D ++WGSLL+
Sbjct: 375 KARDYFSLMMNKYEIEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKADFIIWGSLLSS 434
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C+ +G + A+ A +++ E++P++ ++++N+ +++E + R ++++R A K P
Sbjct: 435 CRKHGNVEIAKRAAQRVCELNPSDASGYLLMSNVQAASNQFEEAMEQRILMRERLAEKEP 494
Query: 492 GCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
GCS IE+ +VH+F + + HP+ EIY
Sbjct: 495 GCSSIELYGEVHEFLAGGRLHPKAREIY 522
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/461 (34%), Positives = 274/461 (59%), Gaps = 8/461 (1%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A +F ++ + + AMI A+A A L+++M + +PN VL +C
Sbjct: 227 AHRVFTNMPGKDVVSWNAMINAFA-LGGLPDKALLLFQEMEMK-DVKPNVITMVSVLSAC 284
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
++ + + + I +GF ++ ++ A+++ Y + G I A+ LF++MS++++VSW
Sbjct: 285 AKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGC-INDAKDLFNKMSEKDIVSW 343
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T M+ G+ ++G+ A +FD+MP + AWN++I+ QNG A+S F M ++S
Sbjct: 344 TTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEM--QLSK 401
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ +P++VTL+CAL A G + G IH Y+ ++ ++L+ ++ +L+DMY KCG+L +A
Sbjct: 402 DAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKA 461
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F +K + W++MI + A++GQ + ++ +F M+ I+P+ VTF ++L AC
Sbjct: 462 MEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAY---IKPNAVTFTNILCAC 518
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
H GLV +G F+ M Y I PQI+HY C+VD+ GRAG E+A ++ M I P V
Sbjct: 519 NHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAV 578
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL C +G + AE A + L+E++P N G ++L+NIY + G W++V +RK+++D
Sbjct: 579 WGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRD 638
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ K P CS I+V+ VH+F D +HP +++IY L+ +
Sbjct: 639 SDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEI 679
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 212/478 (44%), Gaps = 70/478 (14%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARF 67
N+ + +L +++C + LKQ+ + + + + A KL+ + S L YA+
Sbjct: 68 NEVESTNILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKN 127
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F+ + PN Y + +I YAS + + +F ++ M+ PN+F +P + K+ +
Sbjct: 128 VFNQIPQPNLYCWNTLIRGYASS-SDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRL 186
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
++H ++K+ + +L+N Y SG +A ++F M ++VVSW AM
Sbjct: 187 KVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAP-DLAHRVFTNMPGKDVVSWNAM 245
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I+ + G +PD+ A+ F+ M M+ +++
Sbjct: 246 INAFALGG-----------LPDK--------------------ALLLFQEMEMK---DVK 271
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
PN +T+V LSA L+ G+ I Y+ NG ++NA++DMY KCG + +A+
Sbjct: 272 PNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDL 331
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM-----------MRCQDHN------- 349
F++ S+K + SW +M++ A G + + C+F+ M + + N
Sbjct: 332 FNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVAL 391
Query: 350 -----------IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVD 398
+PD VT I L A G ++ G + + K + I L+D
Sbjct: 392 SLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGH-WIHVYIKKHDINLNCHLATSLLD 450
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPN 454
+ + G +A+EV ++ D VW +++ +YG+ A ++E I PN
Sbjct: 451 MYAKCGNLNKAMEVFHAVE-RKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPN 507
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 167/458 (36%), Positives = 271/458 (59%), Gaps = 10/458 (2%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD ++ N Y MI +A + + L+ DM G +P+ F +L C
Sbjct: 182 ARQLFDEMSDRNVVSYNTMILGFA-KVGNILGILELFHDMRSHGL-EPDDFTMLGLLLLC 239
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ E++ K VH QI KS ++ AL++ Y + N++ +ARK+FD +++ VSW
Sbjct: 240 GQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKC-NELKLARKVFDGPMEKDTVSW 298
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+I+GY +VG+++ A LF+ +P RD+ +WNS+I+G QNG + F RM ++
Sbjct: 299 NTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRM---FAE 355
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
N++P++VT+V +SA+ G L G+ IHG + +++F +ALIDMY KCGS++ A
Sbjct: 356 NVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERA 415
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F++ +K +T+W +MI FA HG ++ +F M +P+ VTF+S+L AC
Sbjct: 416 FVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVM----QAETKPNDVTFVSVLAAC 471
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLV++G F M K Y IEP +EHYGCLVDLL R+GR +A+ V++ M +EP +
Sbjct: 472 SHSGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSI 531
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG++L+ C+++ + AE A+ +L++++P G I+L+N+Y G+W +R+++
Sbjct: 532 WGAVLSACRMHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNS 591
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
R K GCS + VD VH F + +K HPR +I L
Sbjct: 592 RGVKKIAGCSSVAVDGMVHDFTASNKQHPRWMDICSIL 629
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 226/522 (43%), Gaps = 96/522 (18%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFD 70
LN L +LE+CN KQ+ + F +L+ F + NL A +F+
Sbjct: 30 LNHPSLILLEKCNSRTQFKQILGHMMRNNLVGQTFPMSRLLFFSAVSHPENLELAILLFN 89
Query: 71 HLTT-PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQ-PQPNQFIYPHVLKSCPDVL 128
H T PN Y++ MI + P AF++YR M++ G P F+Y +L++ V
Sbjct: 90 HFTPYPNLYIFNTMILGF---PFSNEKAFTIYRSMLQNGTYPDRQTFLY--LLQTTKFVA 144
Query: 129 ESRGTKMVHTQIVKSGF---EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
E K +H + G E+Y + +L+ Y +G AR+LFDEMSDRNVVS+
Sbjct: 145 E---VKQIHCHALVFGLLSKEEY--LRNSLIKRYVDNGC-FECARQLFDEMSDRNVVSYN 198
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
MI G+ +VG+I LF M R G+E
Sbjct: 199 TMILGFAKVGNILGILELFHDM----------------------------RSHGLE---- 226
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
P+ T++ L G G +LGK +H + ++ + + NAL+DMY KC LK AR
Sbjct: 227 --PDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLAR 284
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSE-----------------NSI------------ 336
+ FD +K SWN++I +A G+ E NS+
Sbjct: 285 KVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVT 344
Query: 337 --CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY- 393
C+F M N++PD VT ++L++A G ++QGR L K +IE +
Sbjct: 345 VKCLFTRMFA---ENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKML---TKIEAFS 398
Query: 394 -GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI--YGRTDFAEFAVKKLIE 450
L+D+ + G E A + + E D W +++ G +G F+V + E
Sbjct: 399 GSALIDMYCKCGSIERAFVIFNQIP-EKDVTTWTTMITGFAFHGFGNKALELFSVMQ-AE 456
Query: 451 IDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
PN+ + +LA G DE K+ +K R + + PG
Sbjct: 457 TKPNDVTFVSVLAAC-SHSGLVDEGLKIFSSMKKRYSIE-PG 496
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/458 (36%), Positives = 271/458 (59%), Gaps = 10/458 (2%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD ++ N Y MI +A + + L+ DM G +P+ F +L C
Sbjct: 117 ARQLFDEMSDRNVVSYNTMILGFA-KVGNILGILELFHDMRSHGL-EPDDFTMLGLLLLC 174
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ E++ K VH QI KS ++ AL++ Y + N++ +ARK+FD +++ VSW
Sbjct: 175 GQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKC-NELKLARKVFDGPMEKDTVSW 233
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+I+GY +VG+++ A LF+ +P RD+ +WNS+I+G QNG + F RM ++
Sbjct: 234 NTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRM---FAE 290
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
N++P++VT+V +SA+ G L G+ IHG + +++F +ALIDMY KCGS++ A
Sbjct: 291 NVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERA 350
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F++ +K +T+W +MI FA HG ++ +F M +P+ VTF+S+L AC
Sbjct: 351 FVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVM----QAETKPNDVTFVSVLAAC 406
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLV++G F M K Y IEP +EHYGCLVDLL R+GR +A+ V++ M +EP +
Sbjct: 407 SHSGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSI 466
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG++L+ C+++ + AE A+ +L++++P G I+L+N+Y G+W +R+++
Sbjct: 467 WGAVLSACRMHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNS 526
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
R K GCS + VD VH F + +K HPR +I L
Sbjct: 527 RGVKKIAGCSSVAVDGMVHDFTASNKQHPRWMDICSIL 564
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 198/469 (42%), Gaps = 89/469 (18%)
Query: 61 NLTYARFIFDHLTT-PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQ-PQPNQFIYP 118
NL A +F+H T PN Y++ MI + P AF++YR M++ G P F+Y
Sbjct: 15 NLELAILLFNHFTPYPNLYIFNTMILGF---PFSNEKAFTIYRSMLQNGTYPDRQTFLY- 70
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
+L++ V E K +H + G L E
Sbjct: 71 -LLQTTKFVAE---VKQIHCHALVFGL--------------------------LSKEEYL 100
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
RN ++I Y G + A LFD M DR+V ++N++I G + G + F M
Sbjct: 101 RN-----SLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDM 155
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
S + P+ T++ L G G +LGK +H + ++ + + NAL+DMY KC
Sbjct: 156 R---SHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKC 212
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSE-----------------NSI----- 336
LK AR+ FD +K SWN++I +A G+ E NS+
Sbjct: 213 NELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYA 272
Query: 337 ---------CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIE 387
C+F M N++PD VT ++L++A G ++QGR L K
Sbjct: 273 QNGDYVTVKCLFTRMFA---ENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKML--- 326
Query: 388 PQIEHY--GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI--YGRTDFAEF 443
+IE + L+D+ + G E A + + E D W +++ G +G F
Sbjct: 327 TKIEAFSGSALIDMYCKCGSIERAFVIFNQIP-EKDVTTWTTMITGFAFHGFGNKALELF 385
Query: 444 AVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+V + E PN+ + +LA G DE K+ +K R + + PG
Sbjct: 386 SVMQ-AETKPNDVTFVSVLAAC-SHSGLVDEGLKIFSSMKKRYSIE-PG 431
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 127/298 (42%), Gaps = 21/298 (7%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + L AR +FD +T + +I YA + A L+ + R N I
Sbjct: 210 VKCNELKLARKVFDGPMEKDTVSWNTIIAGYA-KVGELELACDLFNQIPTRDIVSWNSLI 268
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN------DIGIAR 170
+ + K + T++ + V L+++ + G G+A
Sbjct: 269 SGYAQNG-----DYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAV 323
Query: 171 KLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSD 230
K+ ++ S +A+I Y + G I+ A +F+ +P++DV W ++I G +G +
Sbjct: 324 KMLTKI---EAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWTTMITGFAFHGFGNK 380
Query: 231 AISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG-KVIHGYVYRNGLDLDSFISN 289
A+ F M E +PN VT V L+A H+G++ G K+ R ++
Sbjct: 381 ALELFSVMQAET----KPNDVTFVSVLAACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYG 436
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTS-WNSMINSFALHGQSENSICVFEEMMRCQ 346
L+D+ + G L +A ++ + S W +++++ +H E + E+++ +
Sbjct: 437 CLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAERALMELLKLE 494
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 174/518 (33%), Positives = 293/518 (56%), Gaps = 16/518 (3%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT-----LKLSNLT-YARFIFD 70
LA+L+ C+ + LK + FL F A +L+ C K +NL YA IF
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ PN +++ +I + S A S AF Y M++ + P+ +P ++K+ ++
Sbjct: 76 QIQNPNLFVFNLLIRCF-STGAEPSKAFGFYTQMLK-SRIWPDNITFPFLIKASSEMECV 133
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
+ H+QIV+ GF+ VE +LV+ Y+ G I A ++F +M R+VVSWT+M++G
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGF-IAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y + G ++NA +FD MP R++ W+ +I G +N F AI F M E + N+
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKRE---GVVANE 249
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
+V +S+ H G L+ G+ + YV ++ + ++ + AL+DM+ +CG +++A F+
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
+ SW+S+I A+HG + ++ F +M+ P VTF ++L+AC+HGGLV
Sbjct: 310 LPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISL---GFIPRDVTFTAVLSACSHGGLV 366
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
E+G ++ M K + IEP++EHYGC+VD+LGRAG+ EA + M ++P+ + G+LL
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLG 426
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
CKIY T+ AE LI++ P + GY ++L+NIY G+WD++ +R M+K++ K
Sbjct: 427 ACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKP 486
Query: 491 PGCSWIEVDKQVHQF-HSLDKTHPRTEEIYDALESMVA 527
PG S IE+D ++++F D+ HP +I E ++
Sbjct: 487 PGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILG 524
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 171/465 (36%), Positives = 272/465 (58%), Gaps = 16/465 (3%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + N + ++IT Y Q A L+ +M+ G P++ V+ +C
Sbjct: 205 ARRVFDAMPERNVVSWNSLITCY-EQNGPVGEALVLFVEMMATGF-FPDEVTLSSVMSAC 262
Query: 125 PDVLESRGTKMVHTQIVKSG-FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
+ R + VH +VK V+ ALV+ Y++ G AR +FD M R+VVS
Sbjct: 263 AGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWE-ARCIFDSMPSRSVVS 321
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
T++++GY + ++++A +F M +++V AWN +IA QNG +AI F ++
Sbjct: 322 ETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLK---R 378
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL------DLDSFISNALIDMYGK 297
D+I P T L+A G+ +LQLG+ H +V + G + D F+ N+L+DMY K
Sbjct: 379 DSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLK 438
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
GS+ + + F+R + + SWN+MI +A +G++++++ +FE M+ C + N PD VT
Sbjct: 439 TGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERML-CSNEN--PDSVTM 495
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
I +L+AC H GLV++GR +F MT+ + I P +HY C+VDLLGRAG +EA E++K M
Sbjct: 496 IGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMP 555
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
EPD V+W SLL C+++ + E +L E+DP N G ++L+N+Y E+GKW +V +
Sbjct: 556 TEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFR 615
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
VR+ +KDR K PGCSWIE+ +++ F + D HP EI+ L
Sbjct: 616 VRRSMKDRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTL 660
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 187/395 (47%), Gaps = 19/395 (4%)
Query: 104 MVRRGQPQPNQFIYPHVLKSCP--DVLESR----GTKMVHTQIVKSGFEQYPVVETALVN 157
M R Q + H+ S P D+L S G + H ++KS + LV+
Sbjct: 1 MARHLHHHRGQELVAHLRASSPLADLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVS 60
Query: 158 SYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNS 217
+Y+R G + AR++FD + RN S+ A++S Y R+G A +LF+++PD D ++N+
Sbjct: 61 TYARLGR-LREARRVFDGIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNA 119
Query: 218 VIAGCTQNGL--FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGY 275
V+A ++G DA+ F M +D+ N + ALSA L+ G+ +HG
Sbjct: 120 VVAALARHGRGHAGDALRFLAAMH---ADDFVLNAYSFASALSACAAEKDLRTGEQVHGL 176
Query: 276 VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
V R+ D I AL+DMY KC +ARR FD ++ + SWNS+I + +G +
Sbjct: 177 VARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEA 236
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ +F EMM PD VT S+++AC +GR M K R+ +
Sbjct: 237 LVLFVEMMAT---GFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNA 293
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNN 455
LVD+ + GR EA + M V S+L G + A+ +++E N
Sbjct: 294 LVDMYAKCGRTWEARCIFDSMPSR-SVVSETSILAGYAKSANVEDAQVVFSQMVE--KNV 350
Query: 456 GGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
+ +++A Y + G+ +E ++ LK + + T
Sbjct: 351 IAWNVLIA-AYAQNGEEEEAIRLFVQLKRDSIWPT 384
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 197/596 (33%), Positives = 301/596 (50%), Gaps = 116/596 (19%)
Query: 39 LGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFDHLTTPNTYLYTAMITAYA--SQPAHA 94
+G TN+ KL+ FC L L YA +F + PN + MI +A S P
Sbjct: 3 IGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPI-- 60
Query: 95 SSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVK------------ 142
SA +LY M+ G PN + +P + KSC ++ K +H QI+K
Sbjct: 61 -SALNLYVYMISLGL-SPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTS 118
Query: 143 --SGFEQYPVVE-----------------TALVNSYSRSGN------------------- 164
S + Q +VE TA++ Y+ GN
Sbjct: 119 LISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSW 178
Query: 165 --------DIG---IARKLFDEMSD--------------------------RNVVSW--- 184
+IG A +LF+EM R + SW
Sbjct: 179 NAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDN 238
Query: 185 ----------TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
A+I Y++ G+++ A LF+ + +DV +WN++I G +A+
Sbjct: 239 HGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLV 298
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN--GLDLDSFISNALI 292
F+ M +++ + PN VT++ L A H G + +G+ IH Y+ + G+ ++ + +LI
Sbjct: 299 FQEM-LKLGET--PNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLI 355
Query: 293 DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
DMY KCG+++ A + FD K L+S N+MI FA+HG+++ F+ + R + I P
Sbjct: 356 DMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRAD---AAFDLLSRMKKDGIEP 412
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
D +TF+ LL+AC+H GL + GR FK MT YRIEP++EHYGC++DLLGR+G F+EA E+
Sbjct: 413 DDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEEL 472
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKW 472
+ M +EPD V+WGSLL CKI+ + E +KL++I+P N G ++L+NIY +W
Sbjct: 473 INSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARW 532
Query: 473 DEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
D+V +VR +L D+ K PGCS IE+D VH+F DK HP+ +EIY LE + +L
Sbjct: 533 DDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSL 588
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 181/489 (37%), Positives = 275/489 (56%), Gaps = 47/489 (9%)
Query: 40 GQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFS 99
G Q F A KL+ + L ++ YAR +FD Y++ A+ A + H
Sbjct: 107 GSDQDPFLATKLIGMYS-DLGSVDYARKVFDKTRKRTIYVWNALFRAL-TLAGHGEEVLG 164
Query: 100 LYRDMVRRGQPQPNQFIYPHVLKSC------PDVLESRGTKMVHTQIVKSGFEQYPVVET 153
LY M R G + ++F Y +VLK+C D L ++G K +H + + G+ + + T
Sbjct: 165 LYWKMNRIGV-ESDRFTYTYVLKACVASECTADHL-TKG-KEIHAHLTRRGYNSHVYIMT 221
Query: 154 ALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVP 213
LV+ Y+R G + A +F+ M RNVVSW+AMI+ Y +
Sbjct: 222 TLVDMYARFGC-VDYASYVFNGMPVRNVVSWSAMIACYAK-------------------- 260
Query: 214 AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH 273
NG +A+ FR M E D+ PN VT+V L A L+ G++IH
Sbjct: 261 -----------NGKAFEALRTFREMMTETKDS-SPNSVTMVSVLQACASLAALEQGRLIH 308
Query: 274 GYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSE 333
GY+ R GLD + +AL+ MYG+CG L +R FDR + + SWNS+I+S+ +HG
Sbjct: 309 GYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGR 368
Query: 334 NSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
+I +FEEM+ + P VTF+S+L AC+H GLVE+G+ F+ M + + I+PQ+EHY
Sbjct: 369 KAIQIFEEML---ANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHY 425
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDP 453
C+VDLLGRA R +EA ++V+ M+ EP VWGSLL C+I+G + AE A ++L ++P
Sbjct: 426 ACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEP 485
Query: 454 NNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHP 513
N G ++LA+IY E WDEV++V+K+L+ R K PG W+EV ++++ F S+D+ +P
Sbjct: 486 KNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNP 545
Query: 514 RTEEIYDAL 522
E+I+ L
Sbjct: 546 LMEQIHAFL 554
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 131/287 (45%), Gaps = 14/287 (4%)
Query: 164 NDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCT 223
+ + + R + D SD++ T +I Y+ +G + A +FD R + WN++ T
Sbjct: 95 DGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALT 154
Query: 224 QNGLFSDAISFF---RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG 280
G + + + R+G+E SD V C S L GK IH ++ R G
Sbjct: 155 LAGHGEEVLGLYWKMNRIGVE-SDRFTYTYVLKACVASECT-ADHLTKGKEIHAHLTRRG 212
Query: 281 LDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFE 340
+ +I L+DMY + G + A F+ + + SW++MI +A +G++ ++ F
Sbjct: 213 YNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFR 272
Query: 341 EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY--FKLMTKTYRIEPQIEHYGCLVD 398
EMM + + P+ VT +S+L AC +EQGR + L I P I LV
Sbjct: 273 EMM-TETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVI---SALVT 328
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN--GCKIYGRTDFAEF 443
+ GR G+ + V M + D V W SL++ G YGR F
Sbjct: 329 MYGRCGKLDVGQRVFDRMH-DRDVVSWNSLISSYGVHGYGRKAIQIF 374
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 136/313 (43%), Gaps = 40/313 (12%)
Query: 24 NHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAM 83
+H+ K++ + LT G + + LV + + YA ++F+ + N ++AM
Sbjct: 196 DHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYA-RFGCVDYASYVFNGMPVRNVVSWSAM 254
Query: 84 ITAYASQPAHASSAFSLYRDMVRRGQ-PQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVK 142
I YA A A +R+M+ + PN VL++C + +++H I++
Sbjct: 255 IACYAKN-GKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILR 313
Query: 143 SGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAAS 202
G + V +ALV Y R G + + +++FD M DR+VVSW ++IS Y G + A
Sbjct: 314 RGLDSILPVISALVTMYGRCGK-LDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQ 372
Query: 203 LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGH 262
+F+ M +++ P VT V L A H
Sbjct: 373 IFEEM----------------------------------LANGASPTPVTFVSVLGACSH 398
Query: 263 TGMLQLGKVIHGYVYRN-GLDLDSFISNALIDMYGKCGSLKEARRAF-DRNSKKRLTSWN 320
G+++ GK + ++R+ G+ ++D+ G+ L EA + D ++ W
Sbjct: 399 EGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWG 458
Query: 321 SMINSFALHGQSE 333
S++ S +HG E
Sbjct: 459 SLLGSCRIHGNVE 471
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 18/219 (8%)
Query: 216 NSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGY 275
N +I + G A+ R + E S P+Q T + GH L G +H +
Sbjct: 50 NQLIQSLCKEGKLKQAL---RVLSQESS----PSQQTYELLILCCGHRSSLSDGLRVHRH 102
Query: 276 VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
+ NG D D F++ LI MY GS+ AR+ FD+ K+ + WN++ + L G E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNA-----CTHGGLVEQGRAYFKLMTKTYRIEPQI 390
+ ++ +M R + D T+ +L A CT L + + L + Y I
Sbjct: 163 LGLYWKMNRI---GVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYI 219
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
LVD+ R G + A V GM + + V W +++
Sbjct: 220 --MTTLVDMYARFGCVDYASYVFNGMPVR-NVVSWSAMI 255
>gi|297599966|ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza sativa Japonica Group]
Length = 438
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 171/417 (41%), Positives = 246/417 (58%), Gaps = 12/417 (2%)
Query: 110 PQPNQFIYPHVLKSCPDV----LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGND 165
P PN VL +C D L R VH +++K F + ++ T LV Y S
Sbjct: 8 PVPNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFAS-RL 65
Query: 166 IGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQN 225
+A +LFD M R+ V++ +ISG R G + A +FD MP D +W ++I GC +N
Sbjct: 66 PHLALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKN 125
Query: 226 GLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
G +AI FR M + D + P+ VTL+ +SA G L LG +H V R GL+ +
Sbjct: 126 GRHDEAIDCFRAM---LLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNV 182
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
I+N+LIDMY +CG ++ AR+ F K+ + SWNSMI FA +G+ +++ FE M R
Sbjct: 183 RIANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRR- 241
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
+PD VTF +L AC+HGGL ++G Y+ LM Y I ++EHYGC+VDLLGR+G+
Sbjct: 242 --EGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQ 299
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANI 465
EEA+ VV M + P+EVV G+LL GC+++G AE ++ L+E+DP ++L+NI
Sbjct: 300 LEEAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNI 359
Query: 466 YGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
Y +GKWD KVR ++K R K PG S +E+D VH+F S D++HP+ EEI L
Sbjct: 360 YAAVGKWDGAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQML 416
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 184/571 (32%), Positives = 295/571 (51%), Gaps = 75/571 (13%)
Query: 22 RCNHINHLKQLQSFLTT-LGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLY 80
R N + K+LQ+ + L Q F +L+ K NL+ AR +FD ++ + + +
Sbjct: 34 RSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYA-KSGNLSDARDLFDKMSRRDVFSW 92
Query: 81 TAMITAYA------------------------------SQPAHASSAFSLYRDMVRRGQP 110
AM++AY+ S +S A + M G
Sbjct: 93 NAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEG-F 151
Query: 111 QPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIAR 170
+ + + VL +C +L+ + K +H +IV + + V AL N Y++ G + AR
Sbjct: 152 ESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGA-LDQAR 210
Query: 171 KLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM------PD--------------- 209
LFD M ++NVVSW +MISGY + G + LF M PD
Sbjct: 211 WLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCG 270
Query: 210 --------------RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
+D W +++ GC QNG DA+ FR M +E N+RP+ T+
Sbjct: 271 YIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLE---NVRPDNFTISS 327
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
+S+ L G+ +HG G+D D +S+AL+DMY KCG +A F R +
Sbjct: 328 VVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRN 387
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
+ SWNSMI +A +G+ ++ ++EEM+ N++PD +TF+ +L+AC H GLVE+G+
Sbjct: 388 VISWNSMILGYAQNGKDLEALALYEEMLH---ENLKPDNITFVGVLSACMHAGLVERGQG 444
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
YF ++K + + P +HY C+++LLGRAG ++A++++K M EP+ ++W +LL+ C+I
Sbjct: 445 YFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRIN 504
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
+ E A + L E+DP+N G IML+NIY G+W +V VR ++K+ K SW
Sbjct: 505 CDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSW 564
Query: 496 IEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
IE+D QVH+F + D+TH TE+IY+ L ++
Sbjct: 565 IEIDNQVHKFVAEDRTHSETEQIYEELNRLI 595
>gi|242066664|ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
gi|241934452|gb|EES07597.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
Length = 496
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 174/442 (39%), Positives = 251/442 (56%), Gaps = 10/442 (2%)
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
+T+ I A Q ++A SL + P PN VL +C D S + +
Sbjct: 35 WTSTIARAARQGDLHAAAASLCAMLSSPAAPAPNDVTLLTVLSACADSPSSPLARPLALT 94
Query: 140 IVKSGFEQYP---VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGD 196
+ + +P ++ T L Y S +A +LFD M R+VV++ M+SG R G
Sbjct: 95 LHARALKLFPSHLLLSTCLARFYLAS-RLPHLALQLFDTMPVRSVVTYNTMVSGLMRNGL 153
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
+ A +FD MP D +W ++I G +NG +AI FR M + D++ P+ VTL+
Sbjct: 154 VDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAM---LLDSVEPDYVTLIAV 210
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
+SA G L LG +H V R GL+ + ++N+LIDMY +CG +K A + F K+ +
Sbjct: 211 VSACAEVGALGLGMWVHRLVLRQGLERNVRVANSLIDMYARCGQVKLAAQVFHSIRKRTV 270
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
SWNSMI A +G +I +FEEM R +PD VT +L AC+H GL E G Y
Sbjct: 271 VSWNSMIVGLAANGLCTEAIELFEEMRR---QGFKPDAVTLTGVLTACSHAGLTEHGLRY 327
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
+ LMT Y I ++EHYGC+VDLLGRAGR +EA+ VV+ M + P+EVV G+LL GC+++G
Sbjct: 328 YDLMTTEYGIAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALLAGCRMHG 387
Query: 437 RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWI 496
D AE ++ L E+DP ++L+NIY +GKWD KVR ++K R K PG S +
Sbjct: 388 DLDMAEQLMQHLFELDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGVKKRPGHSIV 447
Query: 497 EVDKQVHQFHSLDKTHPRTEEI 518
E+D VH+F S D++HP+ EEI
Sbjct: 448 EIDGDVHEFVSSDRSHPQAEEI 469
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 103/261 (39%), Gaps = 40/261 (15%)
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
RDV +W S IA + G A + M + PN VTL+ LSA + L
Sbjct: 30 RDVVSWTSTIARAARQGDLHAAAASLCAM-LSSPAAPAPNDVTLLTVLSACADSPSSPLA 88
Query: 270 KVIHGYVYRNGLDL---------------------------------DSFIS-NALIDMY 295
+ + ++ L L S ++ N ++
Sbjct: 89 RPLALTLHARALKLFPSHLLLSTCLARFYLASRLPHLALQLFDTMPVRSVVTYNTMVSGL 148
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
+ G + A FD SW ++I+ F +G+ + +I F M+ ++ PD V
Sbjct: 149 MRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLL---DSVEPDYV 205
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
T I++++AC G + G +L+ + +E + L+D+ R G+ + A +V
Sbjct: 206 TLIAVVSACAEVGALGLGMWVHRLVLRQ-GLERNVRVANSLIDMYARCGQVKLAAQVFHS 264
Query: 416 MKIEPDEVVWGSLLNGCKIYG 436
++ + V W S++ G G
Sbjct: 265 IR-KRTVVSWNSMIVGLAANG 284
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 177/527 (33%), Positives = 291/527 (55%), Gaps = 17/527 (3%)
Query: 8 LNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARF 67
LN+ VL+ N +N Q+ S + + LV + K N+ A+
Sbjct: 150 LNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYS-KCGNVNDAQR 208
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + N + ++IT + Q A A +++ M+ + +P++ V+ +C +
Sbjct: 209 VFDEMGDRNVVSWNSLITCF-EQNGPAVEALDVFQ-MMLESRVEPDEVTLASVISACASL 266
Query: 128 LESRGTKMVHTQIVKSG-FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
+ + VH ++VK+ ++ A V+ Y++ I AR +FD M RNV++ T+
Sbjct: 267 SAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR-IKEARFIFDSMPIRNVIAETS 325
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
MISGY K A +F M +R+V +WN++IAG TQNG +A+S F + E ++
Sbjct: 326 MISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE---SV 382
Query: 247 RPNQVTLVCALSAIGHTGMLQLGK------VIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
P + L A L LG + HG+ +++G + D F+ N+LIDMY KCG
Sbjct: 383 CPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGC 442
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
++E F + ++ SWN+MI FA +G ++ +F EM+ + +PD +T I +
Sbjct: 443 VEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE---KPDHITMIGV 499
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC H G VE+GR YF MT+ + + P +HY C+VDLLGRAG EEA +++ M ++P
Sbjct: 500 LSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQP 559
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
D V+WGSLL CK++ ++ +KL+E++P+N G ++L+N+Y ELGKW++V VRK
Sbjct: 560 DSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRK 619
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
++ K PGCSWI++ H F DK+HPR ++I+ L+ ++A
Sbjct: 620 SMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIA 666
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 174/335 (51%), Gaps = 9/335 (2%)
Query: 117 YPHVLKSC-PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
+ +L SC L + + VH ++KSGF ++ L+++YS+ G+ + R++FD+
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGS-LEDGRQVFDK 80
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
M RN+ +W ++++G T++G + A SLF SMP+RD WNS+++G Q+ +A+ +F
Sbjct: 81 MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
M E N+ + LSA + G +H + ++ D +I +AL+DMY
Sbjct: 141 AMMHKE---GFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCG++ +A+R FD + + SWNS+I F +G + ++ VF+ M+ + + PD V
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML---ESRVEPDEV 254
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
T S+++AC ++ G+ + K ++ I VD+ + R +EA +
Sbjct: 255 TLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS 314
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE 450
M I + + S+++G + T A K+ E
Sbjct: 315 MPIR-NVIAETSMISGYAMAASTKAARLMFTKMAE 348
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 287/528 (54%), Gaps = 46/528 (8%)
Query: 2 VSVTNQLNQTLNQQVLAILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLK 58
+ V +Q + Q ++ C H + L ++ + G Q F A KL+ +
Sbjct: 66 IRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYS-D 124
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L ++ YAR +FD Y++ A+ A + H LY M R G + ++F Y
Sbjct: 125 LGSVDYARKVFDKTRKRTIYVWNALFRAL-TLAGHGEEVLGLYWKMNRIGV-ESDRFTYT 182
Query: 119 HVLKSCP----DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
+VLK+C V K +H + + G+ + + T LV+ Y+R
Sbjct: 183 YVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYAR------------- 229
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
G + A+ +F MP R+V +W+++IA +NG +A+
Sbjct: 230 -------------------FGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRT 270
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
FR M E D+ PN VT+V L A L+ GK+IHGY+ R GLD + +AL+ M
Sbjct: 271 FREMMRETKDS-SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTM 329
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
YG+CG L+ +R FDR + + SWNS+I+S+ +HG + +I +FEEM+ + P
Sbjct: 330 YGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEML---ANGASPTP 386
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
VTF+S+L AC+H GLVE+G+ F+ M + + I+PQIEHY C+VDLLGRA R +EA ++V+
Sbjct: 387 VTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ 446
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M+ EP VWGSLL C+I+G + AE A ++L ++P N G ++LA+IY E WDE
Sbjct: 447 DMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDE 506
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
V++V+K+L+ R K PG W+EV ++++ F S+D+ +P E+I+ L
Sbjct: 507 VKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFL 554
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 18/219 (8%)
Query: 216 NSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGY 275
N +I + G AI R + E S P+Q T + GH L +H +
Sbjct: 50 NQLIQSLCKEGKLKQAI---RVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 276 VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
+ NG D D F++ LI MY GS+ AR+ FD+ K+ + WN++ + L G E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNA-----CTHGGLVEQGRAYFKLMTKTYRIEPQI 390
+ ++ +M R + D T+ +L A CT L++ + L + Y I
Sbjct: 163 LGLYWKMNRI---GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYI 219
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
LVD+ R G + A V GM + + V W +++
Sbjct: 220 --MTTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMI 255
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 177/510 (34%), Positives = 277/510 (54%), Gaps = 33/510 (6%)
Query: 19 ILERCNHINHLKQLQSFLTTLG----QSQTNFY-AFKLVRFCTLKLSNLTYARFIFDHLT 73
+L C H+N L Q+ + + G S T+ + L C L AR +FD
Sbjct: 58 LLSSCKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDL-------ARSVFDSTP 110
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
P+ L+ +MI AY ++ + A +Y MV +G + + FI ++ +
Sbjct: 111 NPSRILWNSMIRAY-TRSKQYNEALEMYYCMVEKGGLERDVFIGAGLV--------DMYS 161
Query: 134 KMVHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
KM + + F++ P V A++ S+S D +AR++FD+M D++ VSW M++
Sbjct: 162 KMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQS-EDPYVARRVFDQMVDQDDVSWGTMMA 220
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GY G LFD M +V WN +IA QNG +AIS F +M +E N PN
Sbjct: 221 GYAHNGCFVEVLELFDKMKLGNV-TWNVIIAAYMQNGHAKEAISSFHQMRLE---NFHPN 276
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
VT V L A + + G H + + G ++ + N+LIDMY KCG L + + F+
Sbjct: 277 SVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFN 336
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
K SWN+M++ +A+HG + +I +F M Q+ ++ D V+F+S+L+AC H GL
Sbjct: 337 EMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLM---QESQVQIDSVSFVSVLSACRHAGL 393
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
VE+GR F M+ Y I+P +EHY C+VDLLGRAG F+E L +K M +EPD VWG+LL
Sbjct: 394 VEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL 453
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
C+++ E A+ L++++P N + ++L++IY + G+W + K R + D K
Sbjct: 454 GSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKK 513
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
TPGCSW+E+ +VH F DK+HP+ E ++
Sbjct: 514 TPGCSWVELKNKVHAFRVGDKSHPQLESMH 543
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 179/547 (32%), Positives = 297/547 (54%), Gaps = 46/547 (8%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPN 76
++++ I L Q+ + + S ++ +L+ +L+ S + ++ +F+H N
Sbjct: 85 ISLIHGSKTILQLHQIHAQIIIHNLSSSSLITTQLISSSSLRKS-INHSLAVFNHHKPKN 143
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
+ + A+I + +H +A +R M+R G +P++ YP VLKS + + +
Sbjct: 144 LFTFNALIRGLTTN-SHFFNAIFHFRLMLRSGI-KPDRLTYPFVLKSMAGLFSTELGMAI 201
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR----------NV----- 181
H I++ G E V +LV+ Y + +G A K+FDE +R NV
Sbjct: 202 HCMILRCGIELDSFVRVSLVDMYVKV-EKLGSAFKVFDESPERFDSGSSALLWNVLIKGC 260
Query: 182 ---------------------VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIA 220
VSW+ +I G+ + GD+ A LFD MP+++V +W +++
Sbjct: 261 CKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVD 320
Query: 221 GCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG 280
G ++NG A+S F +M + + +RPN T+V ALSA G L+ G IH Y+ NG
Sbjct: 321 GFSRNGDSEKALSMFSKM---LEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNG 377
Query: 281 LDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFE 340
L L + AL+DMY KCG+++ A F +K + +W MI +A+HG SE +I F+
Sbjct: 378 LHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFK 437
Query: 341 EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL 400
+MM I+PD V F++LL AC H G V+ G +F M Y IEP ++HY +VD+L
Sbjct: 438 QMMFA---GIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDML 494
Query: 401 GRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI 460
GR+G+ +EAL ++ M + PD V+WG+L C+ + +T A+FA+ KL++++P + G I
Sbjct: 495 GRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYI 554
Query: 461 MLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYD 520
L+N Y LG+W++ +VR ++++R +K G S IEV+ QVH+F S D H ++ I
Sbjct: 555 FLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHKDSKAICL 614
Query: 521 ALESMVA 527
LE ++A
Sbjct: 615 KLEEIMA 621
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 178/471 (37%), Positives = 272/471 (57%), Gaps = 13/471 (2%)
Query: 28 HLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAY 87
L Q+ + + Q+N + C L + YA +F PN L+ +MI Y
Sbjct: 24 QLPQIHAHILRHHLHQSNQILSHFISVCG-ALDKMGYANLVFHQTQNPNLLLFNSMIKGY 82
Query: 88 ASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQ 147
S + ++ L+ M RG P++F + +LKSC + ++R K VH ++ GFE+
Sbjct: 83 -SLCGPSENSLLLFSQMKNRG-IWPDEFTFAPLLKSCSGICDNRIGKGVHGVVIVVGFER 140
Query: 148 YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM 207
+ + +++ Y+ G + A+K+FDEM DR+V+ W MI G+ +VGDI+ LF M
Sbjct: 141 FSSIRIGIIDLYTSCGR-MEDAKKVFDEMLDRDVIVWNMMIRGFCKVGDIEMGFRLFRQM 199
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
DR V +WNS+IAG Q+G +A+ FR M P+ T+V L G +
Sbjct: 200 RDRSVVSWNSMIAGLEQSGRDGEALELFREMW---DHGFEPDDATVVTILPVCARLGAVD 256
Query: 268 LGKVIHGYVYRNGLDLDSFIS--NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
+G+ IH Y + L L FIS N+L+D Y KCG L+ A R F+ +K + SWN+MI+
Sbjct: 257 VGEWIHSYAESSRL-LRDFISVGNSLVDFYCKCGILETAWRVFNEMPQKNVVSWNAMISG 315
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
+G+ E +FEEM+ + +RP+ TF+ +L+ C H GLVE+GR F MT ++
Sbjct: 316 LTFNGKGELGADLFEEMI---NKGVRPNDATFVGVLSCCAHAGLVERGRNLFTSMTVDHK 372
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
+EP++EH+GC+VDLL R G EEA ++V+ M + P+ V+WGSLL+ + G AE AV
Sbjct: 373 MEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYRTIGDVKHAECAV 432
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWI 496
K+LIE++P N G ++L+N+Y E GKWDEV KVR ++K++N K PG S +
Sbjct: 433 KELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQSMV 483
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 169/485 (34%), Positives = 283/485 (58%), Gaps = 10/485 (2%)
Query: 42 SQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLY 101
S N Y++ + KL ++ AR +FD + + + ++ AYA Q + A LY
Sbjct: 125 SVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCF-NEAIGLY 183
Query: 102 RDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSR 161
RD RR N F + VL C + E + K VH Q++ +GF V+ +++V++YS+
Sbjct: 184 RDF-RRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSK 242
Query: 162 SGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAG 221
G ++ AR LFDEM +++ +WT ++SGY + GD+ +A+ LF MP+++ +W+++I+G
Sbjct: 243 CG-EMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISG 301
Query: 222 CTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL 281
+N L +A+ +F +M + I P Q T L A L+ GK +HGY+ R
Sbjct: 302 YARNSLGHEALDYFTKM---MKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYF 358
Query: 282 DLDSFISNALIDMYGKCGSLKEARRAFD-RNSKKRLTSWNSMINSFALHGQSENSICVFE 340
++ + ++LIDMY KCG L+ + F +K+ + WN+MI++ A +G E ++ +F
Sbjct: 359 RCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFN 418
Query: 341 EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL 400
+M+ + ++PD +TFI +L+AC+H GLV++G +FK MT + + P EHY CL+DLL
Sbjct: 419 DMV---ESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLL 475
Query: 401 GRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI 460
GRAG F E + ++ M +PD+ VW +LL C+I+ + +++IE+ P + +
Sbjct: 476 GRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYV 535
Query: 461 MLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYD 520
LA++Y LGKW+ V KVR+++ ++ K G SWI+V + H F + D+ HP EEIY
Sbjct: 536 SLASLYAFLGKWESVEKVRELMDEKFIRKERGISWIDVGNKTHSFIASDRLHPLKEEIYL 595
Query: 521 ALESM 525
LE +
Sbjct: 596 LLEQL 600
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 186/405 (45%), Gaps = 51/405 (12%)
Query: 97 AFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQ-YPVVETAL 155
A S + +RG P I+ +L+ C +G K VH + +GF++ +V L
Sbjct: 46 ALSYLDRLAQRGIRLPTG-IFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVANHL 104
Query: 156 VNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAW 215
+ Y G D+ ARK+FD+MS RN+ SW M++GY ++GD+ NA LFD M ++DV +W
Sbjct: 105 IGMYFECGRDVE-ARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSW 163
Query: 216 NSVIAGCTQNGLFSDAISF---FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVI 272
N+++ + G F++AI FRR+ M N + L LQL K +
Sbjct: 164 NTIVLAYAKQGCFNEAIGLYRDFRRLDMGF------NAFSFAGVLILCVKLKELQLAKQV 217
Query: 273 HGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR---------------------- 310
HG V G + +S++++D Y KCG ++ AR FD
Sbjct: 218 HGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDM 277
Query: 311 NSKKRL---------TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
NS L SW+++I+ +A + ++ F +MM+ I P+ TF S L
Sbjct: 278 NSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMK---FGINPEQYTFSSCL 334
Query: 362 NACTHGGLVEQGRAYFKLMTKTY-RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
AC ++ G+ + +TY R + L+D+ + G E + V M +
Sbjct: 335 CACASIAALKHGKQVHGYLIRTYFRCNTIV--VSSLIDMYSKCGMLEASCCVFHLMGNKQ 392
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGYGIMLA 463
D VVW ++++ G + A ++E + P+ + ++L+
Sbjct: 393 DVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILS 437
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 171/466 (36%), Positives = 274/466 (58%), Gaps = 16/466 (3%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ FD + N + ++IT Y Q A A ++ M+ G +P++ V+ +C
Sbjct: 205 AQRAFDGMAVRNIVSWNSLITCY-EQNGPAGKALEVFVMMMDNG-VEPDEITLASVVSAC 262
Query: 125 PDVLESRGTKMVHTQIVK-SGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
R +H ++VK + V+ ALV+ Y++ + AR +FD M RNVVS
Sbjct: 263 ASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKC-RRVNEARLVFDRMPLRNVVS 321
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
T+M+ GY R +K A +F +M +++V +WN++IAG TQNG +A+ F + E
Sbjct: 322 ETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRE-- 379
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGK------VIHGYVYRNGLDLDSFISNALIDMYGK 297
+I P T L+A + L+LG+ + HG+ +++G + D F+ N+LIDMY K
Sbjct: 380 -SIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMK 438
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG +++ F+R ++ + SWN+MI +A +G N++ +F +M+ +PD VT
Sbjct: 439 CGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQ---KPDHVTM 495
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
I +L+AC+H GLVE+GR YF M + P +H+ C+VDLLGRAG +EA ++++ M
Sbjct: 496 IGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMP 555
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
++PD VVWGSLL CK++G + ++ +KL+EIDP N G ++L+N+Y ELG+W +V +
Sbjct: 556 MQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVR 615
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
VRK ++ R K PGCSWIE+ +VH F DK HP ++I+ L+
Sbjct: 616 VRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLK 661
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 157/302 (51%), Gaps = 7/302 (2%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ +L SC + +H +I+K+ F ++ LV++Y + G ARK+FD M
Sbjct: 22 FAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGY-FEDARKVFDRM 80
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
RN S+ A++S T+ G + A ++F SMP+ D +WN++++G Q+ F +A+ FF
Sbjct: 81 PQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFV 140
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M S++ N+ + ALSA L +G IH + ++ LD ++ +AL+DMY
Sbjct: 141 DMH---SEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYS 197
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG + A+RAFD + + + SWNS+I + +G + ++ VF MM D+ + PD +T
Sbjct: 198 KCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMM---DNGVEPDEIT 254
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
S+++AC + +G + K + + LVD+ + R EA V M
Sbjct: 255 LASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRM 314
Query: 417 KI 418
+
Sbjct: 315 PL 316
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 181/430 (42%), Gaps = 86/430 (20%)
Query: 43 QTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYR 102
Q N +++ V K L A +F + P+ + AM++ +A Q A +
Sbjct: 82 QRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFA-QHDRFEEALRFFV 140
Query: 103 DMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRS 162
DM N++ + L +C + + +H I KS + + +ALV+ YS+
Sbjct: 141 DM-HSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKC 199
Query: 163 GNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC 222
G + A++ FD M+ RN+VSW ++I+ Y + G A +F M D
Sbjct: 200 GV-VACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMD------------- 245
Query: 223 TQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV-----Y 277
NG + P+++TL +SA ++ G IH V Y
Sbjct: 246 --NG-------------------VEPDEITLASVVSACASWSAIREGLQIHARVVKRDKY 284
Query: 278 RNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS------------------------- 312
RN D + NAL+DMY KC + EAR FDR
Sbjct: 285 RN----DLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARL 340
Query: 313 ------KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
+K + SWN++I + +G++E ++ +F + R +I P TF +LLNAC +
Sbjct: 341 MFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKR---ESIWPTHYTFGNLLNACAN 397
Query: 367 GGLVEQGR-AYFKLMTKTYRI----EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
++ GR A+ +++ + E I L+D+ + G E+ V + M +E D
Sbjct: 398 LADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERM-VERD 456
Query: 422 EVVWGSLLNG 431
V W +++ G
Sbjct: 457 VVSWNAMIVG 466
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 153/359 (42%), Positives = 242/359 (67%), Gaps = 6/359 (1%)
Query: 168 IARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGL 227
+A+KLF ++S RN+V TAMISGY+RVG +++A +FD M ++D+ W+++I+G ++
Sbjct: 1 MAQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDK 60
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
+A++ F M + I+P+QVT++ +SA G+L K IH YV +NGL +
Sbjct: 61 PQEALNLFSEMQVF---GIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPV 117
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
+NALIDMY KCG+L AR F++ + + SW SMIN+FA+HG + N++ F +M +D
Sbjct: 118 NNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQM---KD 174
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE 407
NI+P+GVTF+ +L AC+H GLVE+GR F MT + I P+ EHYGC+VDL GRA
Sbjct: 175 ENIKPNGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLR 234
Query: 408 EALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYG 467
+ALE+V+ M + P+ V+WGSL+ C+I+G + EFA K+++E++P++ G + L+NIY
Sbjct: 235 DALELVETMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYA 294
Query: 468 ELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+ +W +V ++R ++K R K GCS IE++ QV++F DK H + ++IY+ L+ +V
Sbjct: 295 KDRRWQDVGELRNLMKQRGISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVV 353
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 39/271 (14%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR IFD + + ++AMI+ YA + A +L+ +M G +P+Q V+ +C
Sbjct: 33 ARLIFDQMEEKDLVCWSAMISGYA-ESDKPQEALNLFSEMQVFG-IKPDQVTILSVISAC 90
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ K +H + K+G V AL++ Y++ GN +G AR +F++M RNV+SW
Sbjct: 91 ARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGN-LGAARGVFEKMQSRNVISW 149
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T+MI+ + GD NA F M D +
Sbjct: 150 TSMINAFAIHGDASNALKFFYQMKD----------------------------------E 175
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLG-KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
NI+PN VT V L A H G+++ G + + + ++D++G+ L++
Sbjct: 176 NIKPNGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRD 235
Query: 304 ARRAFDRNS-KKRLTSWNSMINSFALHGQSE 333
A + + W S++ + +HG++E
Sbjct: 236 ALELVETMPLAPNVVIWGSLMAACQIHGENE 266
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 163/463 (35%), Positives = 272/463 (58%), Gaps = 12/463 (2%)
Query: 66 RFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
R +F+ + + + +I+ Y + A ++R M ++ +PN+ L +C
Sbjct: 187 RQVFEEMPQRDVVSWNVLISGYV-KCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACI 245
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
+ K +H + V+ + ALV+ Y + G+ + IAR++F++M + V+ WT
Sbjct: 246 ALKMLELGKEIH-RYVREQLGFTIKIGNALVDMYCKCGH-LSIAREIFNDMPIKTVICWT 303
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
+M+SGY G + A LF+ P RDV W ++I G Q F DA++ FR M ++
Sbjct: 304 SMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIK---R 360
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
+ P++ TLV L+ G L+ GK IHGY+ N + +D+ + ALI+MY KCG ++++
Sbjct: 361 VSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSL 420
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
F+ +K SW S+I A++G++ ++ +F EM++ ++PD +TFI +L+AC+
Sbjct: 421 EIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQT---GVKPDDITFIGVLSACS 477
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV- 424
HGGLVE+GR +F+ MT Y+IEP++EHYGCL+DLLGRAG+ +EA E+++ +EV+
Sbjct: 478 HGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIV 537
Query: 425 --WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
+G+LL+ C+ +G + E K+L+ I+ + +LANIY +W++V KVR+ +
Sbjct: 538 PLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKM 597
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
KD K PGCS +EV+ VH+F D +HP EIY L+S+
Sbjct: 598 KDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSI 640
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 232/494 (46%), Gaps = 79/494 (15%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT-LKLSNLTYARFIFDHLTTPNT 77
+L+ C + HLKQ+Q+ + G Q+ K + CT + NL YA IF+++ P
Sbjct: 38 LLKNCKSMQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGL 97
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
++Y +I A+ ++ A L+R + G P+ F YP V K+ + E R + V+
Sbjct: 98 FIYNLVIKAF-TKNGSFRKAVLLFRQLREEGL-SPDNFTYPFVFKAIGCLGEVREGEKVY 155
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
+VKSG E V +L++ Y+ G + R++F+EM R+VVSW +ISGY +
Sbjct: 156 GFVVKSGLEFDTYVCNSLMDMYAEVGR-VQNLRQVFEEMPQRDVVSWNVLISGYVK---- 210
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
C + + DA+ FRRM + S +RPN+ T+V L
Sbjct: 211 ------------------------CRR---YEDAVDVFRRMQQQSS--LRPNEATVVSTL 241
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK-------------------- 297
SA ML+LGK IH YV R L I NAL+DMY K
Sbjct: 242 SACIALKMLELGKEIHRYV-REQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVI 300
Query: 298 -----------CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQ 346
CG L EAR F+R+ + + W +MIN + + ++++ +F EM Q
Sbjct: 301 CWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREM---Q 357
Query: 347 DHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRF 406
+ PD T ++LL C G +EQG+ + + +I L+++ + G
Sbjct: 358 IKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDEN-KIMIDAVVGTALIEMYAKCGFI 416
Query: 407 EEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGY-GIMLA 463
E++LE+ G+K E D W S++ G + G+T A ++++ + P++ + G++ A
Sbjct: 417 EKSLEIFNGLK-EKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSA 475
Query: 464 NIYGELGKWDEVRK 477
+G G +E RK
Sbjct: 476 CSHG--GLVEEGRK 487
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 164/463 (35%), Positives = 276/463 (59%), Gaps = 10/463 (2%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ +F L N+ +T +I + Q S + L+ M R +QF ++ C
Sbjct: 345 AKRVFSSLRDRNSVSWTVLIGGFL-QYGCFSESVELFNQM-RAELMAVDQFALATLISGC 402
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ ++ +H+ +KSG + VV +L++ Y++ GN + A +F+ M++R++VSW
Sbjct: 403 CNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGN-LQNAELIFNFMAERDIVSW 461
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T MI+ Y++VG+I A FD M R+V WN+++ Q+G D + + M E
Sbjct: 462 TGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTE--K 519
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
++ P+ VT V G +LG I G+ + GL LD+ + NA+I MY KCG + EA
Sbjct: 520 DVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEA 579
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R+AFD S+K L SWN+MI ++ HG + +I +F++++ + +PD ++++++L+ C
Sbjct: 580 RKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDIL---NKGAKPDYISYVAVLSGC 636
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLVE+G+ YF +M + + I P +EH+ C+VDLLGRAG EA ++ M ++P V
Sbjct: 637 SHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEV 696
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEID-PNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
WG+LL+ CK +G D AE A K L ++D P +GGY ++LA +Y + GK D+ +VRK+++
Sbjct: 697 WGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGY-MLLAKMYADAGKSDDSAQVRKLMR 755
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
D+ K+PG SW+EV+ +VH F + D +HP+ I + L+ ++
Sbjct: 756 DKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELM 798
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 183/406 (45%), Gaps = 15/406 (3%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
KL +L+ A +F + T + + +++ Y Q +A ++ M + G PN F +
Sbjct: 104 KLGSLSDAVELFGRMPTRDVASWNTIMSGY-YQSGQFLNALDIFVSMRQTGDSLPNAFTF 162
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
V+KSC + + + K + P V+TALV+ R G + A K F +
Sbjct: 163 GCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGA-MDFASKQFSRIK 221
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+ ++ +M+ GY + + +A +F SMP+RDV +WN VI+ +++G +A+
Sbjct: 222 NPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVD 281
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M +RP+ T +L+A L+ GK +H V RN +D ++++A++++Y K
Sbjct: 282 MH---GKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAK 338
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG KEA+R F + SW +I F +G S+ +F +M + + D
Sbjct: 339 CGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQM---RAELMAVDQFAL 395
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+L++ C + + G L K+ + L+ + + G + A E++
Sbjct: 396 ATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVS-NSLISMYAKCGNLQNA-ELIFNFM 453
Query: 418 IEPDEVVWGSLLNGCKIYG-----RTDFAEFAVKKLIEIDPNNGGY 458
E D V W ++ G R F + + + +I + G Y
Sbjct: 454 AERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAY 499
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 166/350 (47%), Gaps = 44/350 (12%)
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLF-DEMSDR 179
L+SC G + +H++++ G ++ L+++Y G + AR L DE+++
Sbjct: 32 LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGA-LSDARNLLRDEITEP 90
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
NV++ M++GY ++G + +A LF MP RDV +WN++++G Q+G F +A+ F +
Sbjct: 91 NVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIF--VS 148
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
M + + PN T C + + G G ++ + G + + D + AL+DM +CG
Sbjct: 149 MRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCG 208
Query: 300 SLKEARRAFD---------RNS----------------------KKRLTSWNSMINSFAL 328
++ A + F RNS ++ + SWN +I++ +
Sbjct: 209 AMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSK 268
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
G+ ++ + +M +RPD T+ S L AC +E G+ +L + R P
Sbjct: 269 SGRVREALDMVVDM---HGKGVRPDSTTYTSSLTACARLSSLEWGK---QLHVQVIRNLP 322
Query: 389 QIEHY--GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
I+ Y +V+L + G F+EA V ++ + + V W L+ G YG
Sbjct: 323 HIDPYVASAMVELYAKCGCFKEAKRVFSSLR-DRNSVSWTVLIGGFLQYG 371
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 8/213 (3%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
++ N+ AR FD ++T N + AM+ AY A +Y DM+ P+ Y
Sbjct: 470 QVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAE-EDGLKMYSDMLTEKDVIPDWVTY 528
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+ + C D+ ++ + VK G V A++ YS+ G I ARK FD +S
Sbjct: 529 VTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGR-ISEARKAFDFLS 587
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR----DVPAWNSVIAGCTQNGLFSDAIS 233
+++VSW AMI+GY++ G K A +FD + ++ D ++ +V++GC+ +GL +
Sbjct: 588 RKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKF 647
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGML 266
+F M + NI P C + +G G L
Sbjct: 648 YFDMMKRD--HNISPGLEHFSCMVDLLGRAGHL 678
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 90/234 (38%), Gaps = 38/234 (16%)
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR------ 305
L AL + G L + +H + GL F+ N L+ Y CG+L +AR
Sbjct: 27 ALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDE 86
Query: 306 --------------------------RAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
F R + + SWN++++ + GQ N++ +F
Sbjct: 87 ITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIF 146
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK-TYRIEPQIEHYGCLVD 398
M + D P+ TF ++ +C G E L++K + +P ++ LVD
Sbjct: 147 VSMRQTGDS--LPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQ--TALVD 202
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
+L R G + A + +K P + S+L G D A K + E D
Sbjct: 203 MLVRCGAMDFASKQFSRIK-NPTIICRNSMLVGYAKSHGVDHALEIFKSMPERD 255
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/464 (36%), Positives = 259/464 (55%), Gaps = 18/464 (3%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L AR +FD + + + MIT YA Q S A L+ ++ P + F + ++
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYA-QNGLLSEARRLFEEL-----PIRDVFAWTAMV 284
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
G T+I + E+ V A++ Y +S I AR+LFD+M RN
Sbjct: 285 SG----FVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQS-QQIEKARELFDQMPSRNT 339
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
SW M++GY + G+I A LFD MP RD +W ++I+G Q+G +A+ F +M
Sbjct: 340 SSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMK-- 397
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
D N+ L CALS+ L+LGK +HG + + G NAL+ MYGKCGS+
Sbjct: 398 -RDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSI 456
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+EA F+ ++K + SWN+MI +A HG + ++ +FE M I+PD VT + +L
Sbjct: 457 EEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM----KMTIKPDDVTLVGVL 512
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
+AC+H GLV++G YF M + Y I +HY C++DLLGRAGR +EAL ++K M PD
Sbjct: 513 SACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPD 572
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
WG+LL +I+G T+ E A +K+ E++P+N G ++L+N+Y G+W EVR++R
Sbjct: 573 AATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSK 632
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
++D+ K PG SW+E+ + H F D +HP E IY LE +
Sbjct: 633 MRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEEL 676
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 176/389 (45%), Gaps = 30/389 (7%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K NL+ AR +F+ + + + AM++ +A Q A ++ M+ + + N +
Sbjct: 133 VKNGNLSAARALFNQMPEKDVVSWNAMLSGFA-QNGFVEEARKIFDQMLVKNEISWNGLL 191
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+V G ++ S + V L+ Y R + AR LFD M
Sbjct: 192 SAYV---------QNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRK-KRLDDARSLFDRM 241
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
R+ +SW MI+GY + G + A LF+ +P RDV AW ++++G QNG+ +A F
Sbjct: 242 PVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFE 301
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M N+V+ ++ G+ Q+ K + + S+ N ++ Y
Sbjct: 302 EMP-------EKNEVSWNAMIA--GYVQSQQIEKARELFDQMPSRNTSSW--NTMVTGYA 350
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
+CG++ +A+ FD ++ SW +MI+ +A GQSE ++ +F +M R D I +
Sbjct: 351 QCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKR--DGGI-LNRSA 407
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
L++C +E G+ + K I L+ + G+ G EEA +V + +
Sbjct: 408 LACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAG-NALLAMYGKCGSIEEAFDVFEDI 466
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
E D V W +++ G Y R F + A+
Sbjct: 467 -TEKDIVSWNTMIAG---YARHGFGKEAL 491
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 155/334 (46%), Gaps = 51/334 (15%)
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
V A+++ Y S N ARK+F++M DR+++SW M+SGY + G++ A +LF+ MP+
Sbjct: 92 VTYNAMISGY-LSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPE 150
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
+DV +WN++++G QNG +A F +M + N+++ LSA G ++
Sbjct: 151 KDVVSWNAMLSGFAQNGFVEEARKIFDQM-------LVKNEISWNGLLSAYVQNGRIEDA 203
Query: 270 K----------------VIHGYVYRNGLD-----------LDSFISNALIDMYGKCGSLK 302
+ ++ GYV + LD D N +I Y + G L
Sbjct: 204 RRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLS 263
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
EARR F+ + + +W +M++ F +G + + +FEEM + V++ +++
Sbjct: 264 EARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM-------PEKNEVSWNAMIA 316
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
+E+ R F M + +V + G ++A + M + D
Sbjct: 317 GYVQSQQIEKARELFDQMPSR-----NTSSWNTMVTGYAQCGNIDQAKILFDEMP-QRDC 370
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNG 456
+ W ++++G Y ++ +E A+ I++ + G
Sbjct: 371 ISWAAMISG---YAQSGQSEEALHLFIKMKRDGG 401
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 137/300 (45%), Gaps = 31/300 (10%)
Query: 138 TQIVKSGFEQYPVVETALV------NSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
TQ ++S +V++ +V ++Y R G A +F+ M R+ V++ AMISGY
Sbjct: 43 TQKLESKNSDSTIVDSDIVKWNRKISAYMRKGQ-CESALSVFNGMRRRSTVTYNAMISGY 101
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
A +F+ MPDRD+ +WN +++G +NG S A + F +M + V
Sbjct: 102 LSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMP-------EKDVV 154
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
+ LS G ++ + I + L + N L+ Y + G +++ARR FD
Sbjct: 155 SWNAMLSGFAQNGFVEEARKI----FDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSK 210
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
+ SWN ++ + + +++ +F+ M +R D +++ ++ GL+
Sbjct: 211 MDWEIVSWNCLMGGYVRKKRLDDARSLFDRM------PVR-DKISWNIMITGYAQNGLLS 263
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ R F+ + + + +V + G +EA + + M E +EV W +++ G
Sbjct: 264 EARRLFEELPIR-----DVFAWTAMVSGFVQNGMLDEATRIFEEMP-EKNEVSWNAMIAG 317
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 278/481 (57%), Gaps = 9/481 (1%)
Query: 46 FYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMV 105
F A L+ C +L A +F + + + +MI + Q A L++ M
Sbjct: 167 FVANSLIH-CYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFV-QKGSPDKALELFKKM- 223
Query: 106 RRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGND 165
+ + VL +C + + V + I ++ + A+++ Y++ G+
Sbjct: 224 ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS- 282
Query: 166 IGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQN 225
I A++LFD M +++ V+WT M+ GY D + A + +SMP +D+ AWN++I+ QN
Sbjct: 283 IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQN 342
Query: 226 GLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
G ++A+ F + ++ N++ NQ+TLV LSA G L+LG+ IH Y+ ++G+ ++
Sbjct: 343 GKPNEALIVFHEL--QLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNF 400
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
+++ALI MY KCG L+++R F+ K+ + W++MI A+HG ++ +F +M
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM--- 457
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
Q+ N++P+GVTF ++ AC+H GLV++ + F M Y I P+ +HY C+VD+LGR+G
Sbjct: 458 QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGY 517
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANI 465
E+A++ ++ M I P VWG+LL CKI+ + AE A +L+E++P N G ++L+NI
Sbjct: 518 LEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNI 577
Query: 466 YGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
Y +LGKW+ V ++RK ++ K PGCS IE+D +H+F S D HP +E++Y L +
Sbjct: 578 YAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEV 637
Query: 526 V 526
+
Sbjct: 638 M 638
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 223/484 (46%), Gaps = 78/484 (16%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTP 75
++++ERC + LKQ + G + A KL L ++L YAR +FD + P
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
N++ + +I AYAS P S ++ + DMV Q PN++ +P ++K+ +V +
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWA-FLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+H VKS V +L++ Y G D+ A K+F + +++VVSW +MI+G+ + G
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCG-DLDSACKVFTTIKEKDVVSWNSMINGFVQKG 211
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
A LF M DV A + VT+V
Sbjct: 212 SPDKALELFKKMESEDVKA----------------------------------SHVTMVG 237
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR----- 310
LSA L+ G+ + Y+ N ++++ ++NA++DMY KCGS+++A+R FD
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 311 ------------------------NS--KKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
NS +K + +WN++I+++ +G+ ++ VF E+
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
N++ + +T +S L+AC G +E GR + K + I L+ + + G
Sbjct: 358 --QKNMKLNQITLVSTLSACAQVGALELGR-WIHSYIKKHGIRMNFHVTSALIHMYSKCG 414
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGYGIML 462
E++ EV ++ + D VW +++ G ++G + A K+ E + PN G+
Sbjct: 415 DLEKSREVFNSVE-KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN----GVTF 469
Query: 463 ANIY 466
N++
Sbjct: 470 TNVF 473
>gi|46805412|dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215704291|dbj|BAG93131.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/417 (41%), Positives = 246/417 (58%), Gaps = 12/417 (2%)
Query: 110 PQPNQFIYPHVLKSCPD----VLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGND 165
P PN VL +C D L R VH +++K F + ++ T LV Y S
Sbjct: 97 PVPNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFAS-RL 154
Query: 166 IGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQN 225
+A +LFD M R+ V++ +ISG R G + A +FD MP D +W ++I GC +N
Sbjct: 155 PHLALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKN 214
Query: 226 GLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
G +AI FR M + D + P+ VTL+ +SA G L LG +H V R GL+ +
Sbjct: 215 GRHDEAIDCFRAM---LLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNV 271
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
I+N+LIDMY +CG ++ AR+ F K+ + SWNSMI FA +G+ +++ FE M R
Sbjct: 272 RIANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRR- 330
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
+PD VTF +L AC+HGGL ++G Y+ LM Y I ++EHYGC+VDLLGR+G+
Sbjct: 331 --EGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQ 388
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANI 465
EEA+ VV M + P+EVV G+LL GC+++G AE ++ L+E+DP ++L+NI
Sbjct: 389 LEEAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNI 448
Query: 466 YGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
Y +GKWD KVR ++K R K PG S +E+D VH+F S D++HP+ EEI L
Sbjct: 449 YAAVGKWDGAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQML 505
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 115/273 (42%), Gaps = 33/273 (12%)
Query: 180 NVVSWTAMISGYTRVGD---IKNAASLFDSMPDRDVP---AWNSVIAGCTQNGLFSDAIS 233
+V SWT+ I+ + GD A S S P VP +V++ C S +
Sbjct: 63 DVASWTSAIARPAKQGDLPAAAAALSAMLSSPAAPVPNDVTLLTVLSACAD----SPSSP 118
Query: 234 FFRRMGMEVSDNIR---PNQVTLVCAL------SAIGHTGMLQLGKVIHGYVYRNGLDLD 284
RR+ + V + P+ + L L S + H + ++ R+ + +
Sbjct: 119 LARRLALSVHARVLKLFPSHLLLSTCLVRFYFASRLPHLAL----QLFDAMPVRSAVTYN 174
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
+ IS + + G + A FD SW ++I+ +G+ + +I F M+
Sbjct: 175 TVISGLM-----RNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLL 229
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
+ PD VT I++++AC G + G +L+ + +E + L+D+ R G
Sbjct: 230 ---DGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQ-GLERNVRIANSLIDMYARCG 285
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
+ E A +V GM+ + V W S++ G GR
Sbjct: 286 QVELARQVFSGMR-KRTVVSWNSMIVGFAANGR 317
>gi|357466867|ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355492766|gb|AES73969.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 629
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/477 (35%), Positives = 274/477 (57%), Gaps = 11/477 (2%)
Query: 51 LVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP 110
L F + YA +F H+ PN + Y ++IT+Y + + + S++ M+
Sbjct: 63 LAFFAASPRGDFRYAETLFTHMPNPNIFDYNSIITSYTTN-SQFDKSLSVFTKMLNM-NI 120
Query: 111 QPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIAR 170
+PN + ++KSC + + V T +KSG ++++N +S+ G I +AR
Sbjct: 121 RPNSHTFTTLVKSCVTL---SSLEQVFTLTMKSGNSSDVYFVSSVINVFSKHG-AIHLAR 176
Query: 171 KLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSD 230
++FDE S+RNVV WT+++SGY G + +FD MP R+ + +++++G +N FS+
Sbjct: 177 QVFDESSNRNVVCWTSLVSGYCSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSE 236
Query: 231 AISFFRRMGMEVSDNIRP--NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS 288
+ FR + + R N LV L+A G + GK IH YV NGL+ D +
Sbjct: 237 GVQLFRELKKKDKGRARVKFNGALLVSVLNACTVMGAFEEGKWIHSYVEENGLEYDLELG 296
Query: 289 NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDH 348
ALID Y KCG +K+A + FD+ K + +W++MI A++G ++ ++ +FE+M +
Sbjct: 297 TALIDFYAKCGWVKDAEKVFDKMLVKDVATWSAMILGLAINGNNKMALELFEKMEKVGP- 355
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
+P+ VTF+ +L AC H L + F +M++ Y I P IEHYGC+VD+L R+G+ ++
Sbjct: 356 --KPNEVTFVGVLTACNHKSLFGESSRLFGIMSEKYNITPSIEHYGCIVDILARSGQVKK 413
Query: 409 ALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGE 468
AL + M IEPD +WGSLLNGC ++G + + K LIE DP + G ++LAN+Y
Sbjct: 414 ALIFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGKYLIEFDPEHSGRYVLLANMYAN 473
Query: 469 LGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+GKW+ V +VRK++KDR G S+IE+D+ +H+F + DK + EIY+ L +
Sbjct: 474 MGKWEGVSEVRKLMKDRGVVIVYGWSFIEIDQTLHKFSADDKCCLYSGEIYEVLSHL 530
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/499 (35%), Positives = 281/499 (56%), Gaps = 18/499 (3%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTPNTYLYTAMI 84
+ LKQ+Q+ + A K + CT + +L YA+ +F+ +T+PNT+++ A+I
Sbjct: 1 MKQLKQIQAQMIKTAIITEPKLATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWNAII 60
Query: 85 TAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG 144
AY S AF Y+ M+ P N + +P +L++C ++L VH ++K G
Sbjct: 61 RAY-SNSDEPELAFLSYQQMLSSSVPH-NSYTFPFLLRACRNLLAMGEALQVHGLVIKLG 118
Query: 145 FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLF 204
F AL++ Y+ G +I AR+LFD + +R+ VSW MI GY + GD+K A +F
Sbjct: 119 FGSDVFALNALLHVYALCG-EIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVF 177
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM---GMEVSDNIRPNQVTLVCALSAIG 261
MP ++V +W S+I+G + G +A+S M G E+ + V + L+A
Sbjct: 178 LDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFEL------DGVAIASLLTACA 231
Query: 262 HTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR--NSKKRLTSW 319
+ G L G+ +H YV NG+D+D I AL++MY KCG ++EA F + ++K + W
Sbjct: 232 NLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIW 291
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
+MI+ FA+HG+ ++ F M R IRP+ +TF ++L AC++GGLVE+G+ FK
Sbjct: 292 TAMIDGFAIHGRGVEALEWFNRMRR---EGIRPNSITFTAVLRACSYGGLVEEGKELFKS 348
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
M Y + P IEHYGC+VDLLGR+GR +EA E++K M ++P V+WG+LL C I+
Sbjct: 349 MKCFYNVNPSIEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDFL 408
Query: 440 FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVD 499
L+E+D ++ G I LA I GKW E +VR +K +PG S + ++
Sbjct: 409 LGSQVGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPISPGKSSVTLN 468
Query: 500 KQVHQFHSLDKTHPRTEEI 518
VH+F + + HP+ E+I
Sbjct: 469 GIVHEFLAGHQDHPQMEQI 487
>gi|242062638|ref|XP_002452608.1| hypothetical protein SORBIDRAFT_04g028970 [Sorghum bicolor]
gi|241932439|gb|EES05584.1| hypothetical protein SORBIDRAFT_04g028970 [Sorghum bicolor]
Length = 485
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/396 (40%), Positives = 236/396 (59%), Gaps = 10/396 (2%)
Query: 133 TKMVHTQIVKSGFEQYPV---VETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
+ +H +VKSG + V T+L+ +Y+R G + ARK+FD M DR VV+W ++
Sbjct: 76 AEQIHALLVKSGVPRTVSDVQVSTSLIRAYARLGR-VCDARKVFDGMPDRTVVTWNVLLD 134
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
R GD+ A +F MP R+V +WN++IAG T+NG +A+ F + M V+ + P+
Sbjct: 135 ALVRDGDLDAAWEVFVEMPQRNVVSWNTIIAGFTRNGWAQEAVDLF--VEMTVAYGLAPD 192
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+ T+V +SA+ G+L +GK HGYV R LD + ALI MY +CGS+ A F
Sbjct: 193 EATMVGFVSAVRDIGLLGIGKSAHGYVLRREFSLDGALGVALISMYTRCGSMGAAHSCFL 252
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
+ K + W S+I FA HGQ E ++ +F EM R I P+GVTF+++LNAC HGGL
Sbjct: 253 SVTTKNVEHWTSLIAGFAAHGQPEKALRLFAEMRRV---GIEPNGVTFVAVLNACNHGGL 309
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
V +G YF LM ++ I P I+HYGCLVDLLGRAG +EA + + +P V+W SLL
Sbjct: 310 VSEGFKYFDLM-RSMGIRPMIQHYGCLVDLLGRAGFLKEAFNLASNLPEDPGFVIWSSLL 368
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
C +G + AE KL + P++G ++L+N Y +W+++R+ R+ +++ K
Sbjct: 369 AACHSHGDVEMAELTASKLADAKPSHGSSYVLLSNTYARAKQWEDLRRTRRRMEEHGVTK 428
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PG SWIEVD VH F + DK H +E+IY LE +
Sbjct: 429 KPGLSWIEVDGGVHSFATADKLHMESEDIYQMLEDL 464
>gi|115448475|ref|NP_001048017.1| Os02g0730900 [Oryza sativa Japonica Group]
gi|46390470|dbj|BAD15931.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|46390866|dbj|BAD16370.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537548|dbj|BAF09931.1| Os02g0730900 [Oryza sativa Japonica Group]
gi|125541007|gb|EAY87402.1| hypothetical protein OsI_08809 [Oryza sativa Indica Group]
gi|125583571|gb|EAZ24502.1| hypothetical protein OsJ_08263 [Oryza sativa Japonica Group]
Length = 488
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 166/420 (39%), Positives = 250/420 (59%), Gaps = 17/420 (4%)
Query: 113 NQFIYPHVLKSCPDVLESRGTK--MVHTQIVKSGFEQYPVVE-----TALVNSYSRSGND 165
N + P L +C +L S + +H +VKSG P V T+LV Y+R G
Sbjct: 60 NPALVP-ALAACARLLPSAAAEAEQIHALLVKSG--DPPSVSGVYASTSLVRVYARLGR- 115
Query: 166 IGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQN 225
+G ARK+FD M + VVSW ++ G R D+ A +F MP+R+V +WN+VIAG ++
Sbjct: 116 LGDARKMFDGMPVKTVVSWNVLLDGIVRASDLDAAWEVFVEMPERNVVSWNTVIAGFVRH 175
Query: 226 GLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
G +A+ F M V + P++ T+V +SA+ G+L +G+ HGYV R LD
Sbjct: 176 GWVQEAVDLFAEM--TVVYGLAPDEATMVGFVSAVRDMGVLGIGRCAHGYVIRREFSLDG 233
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
+ ALI+MY +CGS+ +A R F + K + W S+I FA HG E ++ +F EM
Sbjct: 234 ALGVALINMYTRCGSMGDAFRCFSSVASKNVEQWTSVIGGFAAHGHPEMALRLFTEM--- 290
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
+ I P+GVTF+++LNAC+HGGLV +G YF LM ++ I+ ++HYGCL+DLLGRAG
Sbjct: 291 RQLGIEPNGVTFLAVLNACSHGGLVNEGFKYFNLM-RSMGIKSTMQHYGCLIDLLGRAGF 349
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANI 465
EEA E+ + +P V+W SLL C+ +G + AE A +KL +P +G ++L+N
Sbjct: 350 LEEAFELASSLPEDPGLVIWSSLLAACQSHGNVEMAEVAARKLAHAEPRHGSSYVLLSNT 409
Query: 466 YGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
Y G+W+++++ R+ +++ K PG SWIE+D +VH F S DK H +E+IY LE +
Sbjct: 410 YARAGQWEDLKRTRRKMEEYGVMKQPGLSWIELDGRVHSFVSADKLHTESEDIYQMLEDL 469
>gi|38345134|emb|CAE02724.2| OSJNBa0055H05.11 [Oryza sativa Japonica Group]
gi|215697200|dbj|BAG91194.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 408
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 153/401 (38%), Positives = 253/401 (63%), Gaps = 7/401 (1%)
Query: 105 VRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN 164
++R + P+Q I VL +C R K +H+ ++ S V AL+N Y+ S
Sbjct: 1 MKRSRVVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYA-SCA 59
Query: 165 DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQ 224
D+ +A KL++ +S++ +V T M+ GY + G ++ A S+F+ MP +DV +W+++IAG +
Sbjct: 60 DMEMAEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAE 119
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
+ +A++ F M ++P+++T++ +SA + G L+ + IH +V + +
Sbjct: 120 SSKPMEALNLFHDMQ---RSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKI 176
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
I NALIDM+ KCGSL A F+ +K + +W S+I + A+HG +++ +FE M
Sbjct: 177 LPIGNALIDMFSKCGSLTLALDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENM-- 234
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
+ I+P+GVTF+ LL AC H GLVE+GR FK+M + YRIEP EHYGC+VDLLGRA
Sbjct: 235 -KSEGIQPNGVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAK 293
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLAN 464
+A ++++ M + P+ V+WGSLL C+++G + FA KK++E+DPN+GG ++L+N
Sbjct: 294 LLGQAADLIQSMHLRPNVVIWGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQVLLSN 353
Query: 465 IYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
IY E G W++V++VR +++ + +K GCSW+E++ VHQF
Sbjct: 354 IYAEYGNWNDVKEVRGVMEVQGTWKKKGCSWMELNGSVHQF 394
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 281/514 (54%), Gaps = 14/514 (2%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
Q +L +L+ N I+ +KQ+ G + L++ L+ + A +F+ +
Sbjct: 67 QTLLYLLQAVNFISQVKQIHCQAIVTGLFSFGYLQNTLIKV-YLENGLVRLAHQVFEKMP 125
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
+P+ + MI YA + A L+ +MV G +P++F +L SC + +
Sbjct: 126 SPDIVSFNVMIVGYAKK-GFGLEAMRLFHEMVGLGL-EPDEFTILGLLVSCGQLGNVKFG 183
Query: 134 KMVHTQIV--KSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
K VH + K ++ AL++ Y + + +A + F + ++++VSW +++G
Sbjct: 184 KAVHGWMERRKPTISSNLILGNALLDMYVKC-QKVELALRTFGALKEKDIVSWNMIVAGC 242
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
+VG+++ A F MP RD+ +WNS++ G G F+ M ME + P+ V
Sbjct: 243 AKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVME---KVIPDTV 299
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
T++ +SA +G L G+ HG+V R + LD+F+ +ALIDMY KCGS++ A R F
Sbjct: 300 TMISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSALIDMYCKCGSIERASRVFKEI 359
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
+KK +T W +MI A HG ++ +F EM ++ PD VTF+S+L+AC+H GLV+
Sbjct: 360 NKKDVTVWTTMITGLAFHGYGSKALELFSEM----QEDVSPDDVTFVSVLSACSHSGLVD 415
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
QG F MT Y IEP +EHYGCLVDLL R+GR EA +++ M ++P +WG++LN
Sbjct: 416 QGIKVFSSMTD-YGIEPGVEHYGCLVDLLARSGRLSEAKDIIDQMPMKPSRSIWGAMLNA 474
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C+ G + AE A ++L+ +DP G +L+NIY G+W +K+R+ ++ R KT
Sbjct: 475 CQAQGDVELAEIASRELLNLDPEEEGGYTLLSNIYAASGRWSYSKKIRETMESRGVKKTA 534
Query: 492 GCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
GCS + VD VH F S DK HP +I L +
Sbjct: 535 GCSSVVVDGVVHNFISADKCHPGWVDISSILNCL 568
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 182/410 (44%), Gaps = 80/410 (19%)
Query: 61 NLTYARFIFDHLT-TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPH 119
NL A +F+H T PN ++Y +I+A++S S F LY ++ G+ P++ +
Sbjct: 15 NLDLAITLFNHFTPNPNLFIYNTLISAFSSLKKIES--FYLYNVLLSSGEC-PDKQTLLY 71
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
+L++ + + K +H Q + +G + ++ L+ Y +G + +A ++F++M
Sbjct: 72 LLQAVNFISQ---VKQIHCQAIVTGLFSFGYLQNTLIKVYLENGL-VRLAHQVFEKMPSP 127
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
++VS+ MI GY + G A LF M
Sbjct: 128 DIVSFNVMIVGYAKKGFGLEAMRLFHEM-------------------------------- 155
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS--FISNALIDMYGK 297
V + P++ T++ L + G G ++ GK +HG++ R + S + NAL+DMY K
Sbjct: 156 --VGLGLEPDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVK 213
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD---------- 347
C ++ A R F +K + SWN ++ A G+ E + F + M C+D
Sbjct: 214 CQKVELALRTFGALKEKDIVSWNMIVAGCAKVGELEQARLFFYQ-MPCRDIVSWNSLVTG 272
Query: 348 -------------------HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
+ PD VT ISL++A T G ++QGR + R++
Sbjct: 273 YACRGDFASVKELIVDMVMEKVIPDTVTMISLVSAATESGALDQGRWAHGWVI---RMQI 329
Query: 389 QIEHY--GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
+++ + L+D+ + G E A V K + + D VW +++ G +G
Sbjct: 330 KLDAFLGSALIDMYCKCGSIERASRVFKEIN-KKDVTVWTTMITGLAFHG 378
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/488 (35%), Positives = 273/488 (55%), Gaps = 18/488 (3%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
+IL C + L + + G F LV K + +AR +FD + +
Sbjct: 171 SILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYA-KRGCIEFARELFDKMPQRDV 229
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+ AMI Y Q A L++++ +R N + + C DV +
Sbjct: 230 VSWNAMIAGYV-QNGLIEDALKLFQEIPKRDVITWNTMMAGYA--QCGDVENA------- 279
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
++ + EQ V ++ Y ++G+ + A KLF M +RNV+SW A+ISG+ + G +
Sbjct: 280 VELFEKMPEQNLVSWNTMIAGYVQNGS-VKEAFKLFQIMPERNVISWNAVISGFAQNGQV 338
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
+ A LF +MP+ +V +WN++IAG +QNG +A+ F +M M +++PN T L
Sbjct: 339 EEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMV---DMKPNTETFAIVL 395
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
A +L+ G H V R+G D + N L+ MY KCGS+++AR+ FDR ++
Sbjct: 396 PACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSA 455
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
S ++MI +A++G S+ S+ +FE+M Q ++PD VTF+ +L+AC H GLV++GR YF
Sbjct: 456 SLSAMIVGYAINGCSKESLELFEQM---QFTGLKPDRVTFVGVLSACCHAGLVDEGRQYF 512
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
+MT+ Y I P +EHYGC++DLLGRAG F+EA +++ M I+PD +WGSLL+ C+ +
Sbjct: 513 DIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNN 572
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
D E + LI ++P N ++L+NIY G+WD++ VR +KDR K GCSWI
Sbjct: 573 IDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWIV 632
Query: 498 VDKQVHQF 505
+ KQVH F
Sbjct: 633 IKKQVHAF 640
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 199/381 (52%), Gaps = 27/381 (7%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+KL +L AR +FD + N +TAMI AYA H A + +M G QPN F
Sbjct: 111 VKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHE-HGQEALGFFYEMQDVG-IQPNHFT 168
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ +L +C D LE G H +IVK GFE V LV+ Y++ G I AR+LFD+M
Sbjct: 169 FASILPACTD-LEVLGE--FHDEIVKGGFESNVFVGNGLVDMYAKRGC-IEFARELFDKM 224
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
R+VVSW AMI+GY + G I++A LF +P RDV WN+++AG Q G +A+ F
Sbjct: 225 PQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFE 284
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS-NALIDMY 295
+M P Q LV + I G +Q G V + + + IS NA+I +
Sbjct: 285 KM---------PEQ-NLVSWNTMI--AGYVQNGSVKEAFKLFQIMPERNVISWNAVISGF 332
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
+ G ++EA + F + + SWN+MI ++ +GQ+EN++ +F +M Q +++P+
Sbjct: 333 AQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQM---QMVDMKPNTE 389
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF +L AC ++EQG +++ ++ + + LV + + G E+A +V
Sbjct: 390 TFAIVLPACAALAVLEQGNEAHEVVIRS-GFQSDVLVGNTLVGMYAKCGSIEDARKVFDR 448
Query: 416 MKIEP----DEVVWGSLLNGC 432
M+ + ++ G +NGC
Sbjct: 449 MRQQDSASLSAMIVGYAINGC 469
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 178/398 (44%), Gaps = 82/398 (20%)
Query: 97 AFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFE-QYPVVETAL 155
A + +DMV G P+ Y +L+ C + K++H ++++ FE Q + L
Sbjct: 48 ALHILQDMVENG-IWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKL 106
Query: 156 VNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAW 215
V+ Y + G+ + AR++FDEM +NVVSWTAMI+ Y R + A F M D
Sbjct: 107 VSIYVKLGSLVE-ARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDV----- 160
Query: 216 NSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGY 275
I+PN T L A T + LG+ H
Sbjct: 161 -----------------------------GIQPNHFTFASILPAC--TDLEVLGE-FHDE 188
Query: 276 VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
+ + G + + F+ N L+DMY K G ++ AR FD+ ++ + SWN+MI + +G E++
Sbjct: 189 IVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDA 248
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT-------------- 381
+ +F+E+ + D +T+ +++ G VE F+ M
Sbjct: 249 LKLFQEI-------PKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGY 301
Query: 382 ----------KTYRIEPQ--IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
K ++I P+ + + ++ + G+ EEAL++ K M E + V W +++
Sbjct: 302 VQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMP-ECNVVSWNAMI 360
Query: 430 NGCKIYGRTDFAEFAVK-----KLIEIDPNNGGYGIML 462
G Y + AE A+K +++++ PN + I+L
Sbjct: 361 AG---YSQNGQAENALKLFGQMQMVDMKPNTETFAIVL 395
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 15/237 (6%)
Query: 216 NSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGY 275
+ ++ + G +A+ + M V + I P+ T L + L K++H +
Sbjct: 33 DGLVKSLCKQGRLREALHILQDM---VENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAH 89
Query: 276 VYRNGLDL-DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
+ + + D + N L+ +Y K GSL EARR FD K + SW +MI ++A H +
Sbjct: 90 MIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQE 149
Query: 335 SICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG 394
++ F EM QD I+P+ TF S+L ACT L G + +++ + E +
Sbjct: 150 ALGFFYEM---QDVGIQPNHFTFASILPACTD--LEVLGEFHDEIVKGGF--ESNVFVGN 202
Query: 395 CLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
LVD+ + G E A E+ M + D V W +++ G Y + E A+K EI
Sbjct: 203 GLVDMYAKRGCIEFARELFDKMP-QRDVVSWNAMIAG---YVQNGLIEDALKLFQEI 255
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/485 (36%), Positives = 267/485 (55%), Gaps = 30/485 (6%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM---------------VRRGQ 109
AR +FD + N + AMI AY Q A L+++ VR G+
Sbjct: 254 ARKLFDRMPCKNVVSWNAMIAAYV-QDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGK 312
Query: 110 PQPNQFIY---PHVLKSCPDVLES----RGTKMVHTQIVKSGFEQYPVVETALVNSYSRS 162
+ +Y P+ + L S G +Q+ ++ + +++ Y +S
Sbjct: 313 LDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQS 372
Query: 163 GNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC 222
G + A LF +M +N VSW MISGY + G++ A +F++M R+V +WNS+I G
Sbjct: 373 GR-MSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGF 431
Query: 223 TQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLD 282
QNGL+ DA+ MG E +P+Q T C+LS+ + LQ+GK +H + ++G
Sbjct: 432 LQNGLYLDALKSLVLMGQE---GKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYI 488
Query: 283 LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM 342
D F+SNALI MY KCG ++ A + F L SWNS+I+ +AL+G + + FE+M
Sbjct: 489 NDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQM 548
Query: 343 MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGR 402
PD VTFI +L+AC+H GL QG FK M + + IEP EHY CLVDLLGR
Sbjct: 549 ---SSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGR 605
Query: 403 AGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIML 462
GR EEA +V+GMK++ + +WGSLL C+++ + + A +L+E++P+N I L
Sbjct: 606 MGRLEEAFNIVRGMKVKANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYITL 665
Query: 463 ANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+N++ E G+W++V ++R ++++R A K PGCSWIEV Q+ F S D RTE I L
Sbjct: 666 SNMHAEAGRWEDVERLRVLMRERRAGKLPGCSWIEVQNQIQNFVSDDPGKLRTESIKIIL 725
Query: 523 ESMVA 527
++ A
Sbjct: 726 NTLSA 730
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 189/455 (41%), Gaps = 70/455 (15%)
Query: 47 YAFKLVRFCTLKLSNLTYARFIFDHLTTP-NTYLYTAMITAYASQPAHASSAFSLYRDMV 105
+++ L+ C + L AR +F+ + +T + AMI YA + A ++ M
Sbjct: 111 FSWALMITCYTRKGMLEKARELFELVPDKLDTACWNAMIAGYAKK-GRFDDAEKVFEKMP 169
Query: 106 RRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGND 165
+ N + + + +M +V + ++ VN+ D
Sbjct: 170 VKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVV-----SWNLMVAGFVNNC-----D 219
Query: 166 IGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQN 225
+G A +LF+++ D N VSW M+ G+ R G I A LFD MP ++V +WN++IA Q+
Sbjct: 220 LGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQD 279
Query: 226 GLFSDAISFFR------------------RMGM-----EVSDNIRPNQVTLVCALSAIGH 262
+A+ F+ R+G EV + + V AL
Sbjct: 280 LQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTAL----M 335
Query: 263 TGMLQLGKVIHG-YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNS 321
+G++Q G++ V+ D+ N++I Y + G + EA F + K SWN+
Sbjct: 336 SGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNT 395
Query: 322 MINSFALHGQSENSICVFEEM----------------------------MRCQDHNIRPD 353
MI+ +A G+ + + +FE M + +PD
Sbjct: 396 MISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPD 455
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
TF L++C + ++ G+ +L+ K+ I L+ + + G + A +V
Sbjct: 456 QSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVS-NALIAMYAKCGGVQSAEKVF 514
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL 448
K ++ D + W SL++G + G + A +A +++
Sbjct: 515 KDIE-GVDLISWNSLISGYALNGYANEAFWAFEQM 548
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 160/369 (43%), Gaps = 83/369 (22%)
Query: 154 ALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG----------------------- 190
++V ++++G + AR+LFD+MS RN+VSW MI+G
Sbjct: 53 SMVTVFAKNGR-VSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNF 111
Query: 191 --------YTRVGDIKNAASLFDSMPDR-DVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
YTR G ++ A LF+ +PD+ D WN++IAG + G F DA F + M
Sbjct: 112 SWALMITCYTRKGMLEKARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEK--MP 169
Query: 242 VSDNIRPNQVTLVCALSAIGHTGM-------------LQLGKVIHGYVYRNGLDLDSFIS 288
V D + N +++ + G G+ + ++ G+V N DL S
Sbjct: 170 VKDLVSYN--SMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFV--NNCDLGSAWE 225
Query: 289 --------NA-----LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
NA ++ + + G + EAR+ FDR K + SWN+MI ++ Q + +
Sbjct: 226 LFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEA 285
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ +F+E D V++ +++N G +++ R + M Y+ +
Sbjct: 286 VKLFKE-------TPYKDCVSWTTMINGYVRVGKLDEAREVYNQM--PYK---DVAAKTA 333
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD-----FAEFAVKKLIE 450
L+ L + GR +EA +V + + D + W S++ G GR F + VK +
Sbjct: 334 LMSGLIQNGRIDEASQVFSQLN-KRDAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVS 392
Query: 451 IDPNNGGYG 459
+ GY
Sbjct: 393 WNTMISGYA 401
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 152/347 (43%), Gaps = 31/347 (8%)
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
A+++F + +N ++ +M++ + + G + +A LFD M R++ +WN++IAG N +
Sbjct: 36 AKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMV 95
Query: 229 SDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS 288
+A F M + + ++ GML+ + + V LD+
Sbjct: 96 EEAHKLFDLMA-------ERDNFSWALMITCYTRKGMLEKARELFELVPDK---LDTACW 145
Query: 289 NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDH 348
NA+I Y K G +A + F++ K L S+NSM+ + +G+ ++ FE M +
Sbjct: 146 NAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERM---AER 202
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
N+ + +N C G + ++L K +P + ++ R G+ E
Sbjct: 203 NVVSWNLMVAGFVNNCDLG-------SAWELFEKI--PDPNAVSWVTMLCGFARHGKIVE 253
Query: 409 ALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGE 468
A ++ M + + V W +++ Y + + AVK E + + N Y
Sbjct: 254 ARKLFDRMPCK-NVVSWNAMIAA---YVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVR 309
Query: 469 LGKWDEVRKVRKMLKDRN-AYKTPGCSWI----EVDKQVHQFHSLDK 510
+GK DE R+V + ++ A KT S + +D+ F L+K
Sbjct: 310 VGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNK 356
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
F N I GK G + EA+R F K ++NSM+ FA +G+ ++ +F++M
Sbjct: 18 FNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKM--- 74
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
N+ V++ +++ H +VE+ F LM E + ++ R G
Sbjct: 75 SQRNL----VSWNTMIAGYLHNNMVEEAHKLFDLMA-----ERDNFSWALMITCYTRKGM 125
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANI 465
E+A E+ + + + D W +++ G GR D AE +K+ D + Y MLA
Sbjct: 126 LEKARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVS--YNSMLAG- 182
Query: 466 YGELGKWDEVRKVRKMLKDRN 486
Y + GK K + + +RN
Sbjct: 183 YTQNGKMGLAMKFFERMAERN 203
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 114/261 (43%), Gaps = 27/261 (10%)
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
+NV + I + G I A +F ++ ++ +NS++ +NG SDA F +M
Sbjct: 15 KNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKM 74
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
+ N V+ ++ H M++ + + + D+F +I Y +
Sbjct: 75 S-------QRNLVSWNTMIAGYLHNNMVEEAHKLFDLM----AERDNFSWALMITCYTRK 123
Query: 299 GSLKEARRAFDRNSKKRLTS-WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
G L++AR F+ K T+ WN+MI +A G+ +++ VFE+M D V++
Sbjct: 124 GMLEKARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKM-------PVKDLVSY 176
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL-LGRAGRFEEALEVVKGM 416
S+L T G + +F+ M + + + G + + LG A E +
Sbjct: 177 NSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIP----- 231
Query: 417 KIEPDEVVWGSLLNGCKIYGR 437
+P+ V W ++L G +G+
Sbjct: 232 --DPNAVSWVTMLCGFARHGK 250
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 281/521 (53%), Gaps = 57/521 (10%)
Query: 35 FLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHA 94
+LT F K++ C ++ ++ A +F + NT + +++ + P+
Sbjct: 51 YLTKPSDQDQIFPLNKIIARC-VRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRM 109
Query: 95 SSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETA 154
A L+ ++ P+P+ F Y +++ SC + V+ + +S F++ P + A
Sbjct: 110 MEAHQLFDEI-----PEPDTFSY-NIMLSC-------YVRNVNFEKAQSFFDRMPFKDAA 156
Query: 155 ----LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR 210
++ Y+R G ++ AR+LF M ++N VSW AMISGY GD++ A+ F P R
Sbjct: 157 SWNTMITGYARRG-EMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVR 215
Query: 211 DVPAW--------------------------------NSVIAGCTQNGLFSDAISFFRRM 238
V AW N++I+G +N D + FR M
Sbjct: 216 GVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAM 275
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
+ + IRPN L AL LQLG+ IH V ++ L D +LI MY KC
Sbjct: 276 ---LEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKC 332
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G L +A + F+ KK + +WN+MI+ +A HG ++ ++C+F EM+ D+ IRPD +TF+
Sbjct: 333 GELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMI---DNKIRPDWITFV 389
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
++L AC H GLV G AYF+ M + Y++EPQ +HY C+VDLLGRAG+ EEAL++++ M
Sbjct: 390 AVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPF 449
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
P V+G+LL C+++ + AEFA +KL++++ N + LANIY +W++V +V
Sbjct: 450 RPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARV 509
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
RK +K+ N K PG SWIE+ +VH F S D+ HP + I+
Sbjct: 510 RKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/485 (34%), Positives = 283/485 (58%), Gaps = 10/485 (2%)
Query: 42 SQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLY 101
S N Y++ + KL ++ AR +FD + + + ++ AYA Q + A LY
Sbjct: 125 SVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCF-NEAIGLY 183
Query: 102 RDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSR 161
RD RR N F + VL C + E + K VH Q++ +GF V+ +++V++Y++
Sbjct: 184 RDF-RRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAK 242
Query: 162 SGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAG 221
G ++ AR LFDEM +++ +WT ++SGY + GD+ +A+ LF MP+++ +W+++I+G
Sbjct: 243 CG-EMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISG 301
Query: 222 CTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL 281
+N L +A+ +F +M + I P Q T L A L+ GK +HGY+ R
Sbjct: 302 YARNSLGHEALDYFTKM---MKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYF 358
Query: 282 DLDSFISNALIDMYGKCGSLKEARRAFD-RNSKKRLTSWNSMINSFALHGQSENSICVFE 340
++ + ++LIDMY KCG L+ + F +K+ + WN+MI++ A +G E ++ +F
Sbjct: 359 RCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFN 418
Query: 341 EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL 400
+M+ + ++PD +TFI +L+AC+H GLV++G +FK MT + + P EHY CL+DLL
Sbjct: 419 DMV---ESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLL 475
Query: 401 GRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI 460
GRAG F E + ++ M +PD+ VW +LL C+I+ + +++IE+ P + +
Sbjct: 476 GRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYV 535
Query: 461 MLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYD 520
LA++Y LGKW+ V KVR+++ ++ K G SWI+V + H F + D+ HP EEIY
Sbjct: 536 SLASLYAFLGKWESVEKVRELMDEKFIRKERGISWIDVGNKTHSFIASDRLHPLKEEIYL 595
Query: 521 ALESM 525
LE +
Sbjct: 596 LLEQL 600
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 186/405 (45%), Gaps = 51/405 (12%)
Query: 97 AFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQ-YPVVETAL 155
A S + +RG P I+ +L+ C +G K VH + +GF++ +V L
Sbjct: 46 ALSYLDRLAQRGVRLPTG-IFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVANHL 104
Query: 156 VNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAW 215
+ Y G D+ ARK+FD+MS RN+ SW M++GY ++GD+ NA LFD M ++DV +W
Sbjct: 105 IGMYFECGRDVE-ARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSW 163
Query: 216 NSVIAGCTQNGLFSDAISF---FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVI 272
N+++ + G F++AI FRR+ M N + L LQL K +
Sbjct: 164 NTIVLAYAKQGCFNEAIGLYRDFRRLDMGF------NAFSFAGVLILCVKLKELQLAKQV 217
Query: 273 HGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR---------------------- 310
HG V G + +S++++D Y KCG ++ AR FD
Sbjct: 218 HGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDM 277
Query: 311 NSKKRL---------TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
NS L SW+++I+ +A + ++ F +MM+ I P+ TF S L
Sbjct: 278 NSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMK---FGINPEQYTFSSCL 334
Query: 362 NACTHGGLVEQGRAYFKLMTKTY-RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
AC ++ G+ + +TY R + L+D+ + G E + V M +
Sbjct: 335 CACASIAALKHGKQVHGYLIRTYFRCNTIV--VSSLIDMYSKCGMLEASCCVFHLMGNKQ 392
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGYGIMLA 463
D VVW ++++ G + A ++E + P+ + ++L+
Sbjct: 393 DVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILS 437
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/517 (34%), Positives = 281/517 (54%), Gaps = 47/517 (9%)
Query: 48 AFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRR 107
A KL+R + + + AR+IFD N + MI +Y + + A S+++ M+
Sbjct: 74 AIKLMRAYSAQ-GETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVE-ALSIFQVMLSC 131
Query: 108 GQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIG 167
P+ + +P VLK+C + R VH IVK G + + ALV Y + G +
Sbjct: 132 AF-NPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGC-LR 189
Query: 168 IARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA-------------------ASL----- 203
ARK+ D+M R+VVSW +M++GY + G +A ASL
Sbjct: 190 EARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVC 249
Query: 204 -------------FDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
F+ M +++ +WN +IA N + ++A+S F +M ++P+
Sbjct: 250 YTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQME---ECGMKPDA 306
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
VT+ L A G L LG+ +H Y+ + L + + NAL+DMY KCG L+EAR FD+
Sbjct: 307 VTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDK 366
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
+ + SW SM++++ GQ +++ +F +M+ D PD + F+S+L+AC+H GL+
Sbjct: 367 MRLRDVVSWTSMMSAYGRSGQGYDAVALFAKML---DSGQNPDSIAFVSVLSACSHTGLL 423
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
+QGR YF++MT+ Y I P+IEH+ C+VDL GRAG EEA +K M +EP+E VWG+LL+
Sbjct: 424 DQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLS 483
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
C+++ + D A L ++ P GY ++L+NIY + G W +V VR +K K
Sbjct: 484 ACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKV 543
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
PG S +E++ QVH F + D+ HP+ + IY L+ +V
Sbjct: 544 PGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVG 580
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 5/194 (2%)
Query: 262 HTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNS 321
+ G+ L K+ V L +D ++ L+ Y G AR FDR+ +K + +N
Sbjct: 48 YPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNV 107
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
MI S+ + ++ +F+ M+ C PD TF +L AC+ + G +
Sbjct: 108 MIRSYVNNNLYVEALSIFQVMLSCA---FNPDHYTFPCVLKACSGLDNLRVGLQVHDAIV 164
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
K ++ + LV + G+ G EA +V+ M D V W S++ G G+ D A
Sbjct: 165 KV-GLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYR-DVVSWNSMVAGYAQSGQFDDA 222
Query: 442 EFAVKKLIEIDPNN 455
K++ ++ N+
Sbjct: 223 LEICKEMDSLNLNH 236
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/464 (36%), Positives = 258/464 (55%), Gaps = 18/464 (3%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L AR +FD + + + MIT YA Q S A L+ ++ P + F + ++
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYA-QNGLLSEARRLFEEL-----PIRDVFAWTAMV 284
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
G T+I + E+ V A++ Y +S I AR+LFD+M RN
Sbjct: 285 SG----FVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQS-QQIEKARELFDQMPSRNT 339
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
SW M++GY + G+I A LFD MP RD +W ++I+G Q+G +A+ F +M
Sbjct: 340 SSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMK-- 397
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
D N+ L CALS+ L+LGK +HG + + G NAL+ MYGKCGS+
Sbjct: 398 -RDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSI 456
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+EA F+ ++K + SWN+MI +A HG + ++ +FE M I+PD VT + +L
Sbjct: 457 EEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM----KMTIKPDDVTLVGVL 512
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
+AC+H G V++G YF M + Y I +HY C++DLLGRAGR +EAL ++K M PD
Sbjct: 513 SACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPD 572
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
WG+LL +I+G T+ E A +K+ E++P+N G ++L+N+Y G+W EVR++R
Sbjct: 573 AATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSK 632
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
++D+ K PG SW+E+ + H F D +HP E IY LE +
Sbjct: 633 MRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEEL 676
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 176/389 (45%), Gaps = 30/389 (7%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K NL+ AR +F+ + + + AM++ +A Q A ++ M+ + + N +
Sbjct: 133 VKNGNLSAARALFNQMPEKDVVSWNAMLSGFA-QNGFVEEARKIFDQMLVKNEISWNGLL 191
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+V G ++ S + V L+ Y R + AR LFD M
Sbjct: 192 SAYV---------QNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRK-KRLDDARSLFDRM 241
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
R+ +SW MI+GY + G + A LF+ +P RDV AW ++++G QNG+ +A F
Sbjct: 242 PVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFE 301
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M N+V+ ++ G+ Q+ K + + S+ N ++ Y
Sbjct: 302 EMP-------EKNEVSWNAMIA--GYVQSQQIEKARELFDQMPSRNTSSW--NTMVTGYA 350
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
+CG++ +A+ FD ++ SW +MI+ +A GQSE ++ +F +M R D I +
Sbjct: 351 QCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKR--DGGI-LNRSA 407
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
L++C +E G+ + K I L+ + G+ G EEA +V + +
Sbjct: 408 LACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAG-NALLAMYGKCGSIEEAFDVFEDI 466
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
E D V W +++ G Y R F + A+
Sbjct: 467 -TEKDIVSWNTMIAG---YARHGFGKEAL 491
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 155/334 (46%), Gaps = 51/334 (15%)
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
V A+++ Y S N ARK+F++M DR+++SW M+SGY + G++ A +LF+ MP+
Sbjct: 92 VTYNAMISGY-LSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPE 150
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
+DV +WN++++G QNG +A F +M + N+++ LSA G ++
Sbjct: 151 KDVVSWNAMLSGFAQNGFVEEARKIFDQM-------LVKNEISWNGLLSAYVQNGRIEDA 203
Query: 270 K----------------VIHGYVYRNGLD-----------LDSFISNALIDMYGKCGSLK 302
+ ++ GYV + LD D N +I Y + G L
Sbjct: 204 RRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLS 263
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
EARR F+ + + +W +M++ F +G + + +FEEM + V++ +++
Sbjct: 264 EARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM-------PEKNEVSWNAMIA 316
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
+E+ R F M + +V + G ++A + M + D
Sbjct: 317 GYVQSQQIEKARELFDQMPSR-----NTSSWNTMVTGYAQCGNIDQAKILFDEMP-QRDC 370
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNG 456
+ W ++++G Y ++ +E A+ I++ + G
Sbjct: 371 ISWAAMISG---YAQSGQSEEALHLFIKMKRDGG 401
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 137/300 (45%), Gaps = 31/300 (10%)
Query: 138 TQIVKSGFEQYPVVETALV------NSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
TQ ++S +V++ +V ++Y R G A +F+ M R+ V++ AMISGY
Sbjct: 43 TQKLESKNSDSTIVDSDIVKWNRKISAYMRKGQ-CESALSVFNGMRRRSTVTYNAMISGY 101
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
A +F+ MPDRD+ +WN +++G +NG S A + F +M + V
Sbjct: 102 LSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMP-------EKDVV 154
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
+ LS G ++ + I + L + N L+ Y + G +++ARR FD
Sbjct: 155 SWNAMLSGFAQNGFVEEARKI----FDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSK 210
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
+ SWN ++ + + +++ +F+ M +R D +++ ++ GL+
Sbjct: 211 MDWEIVSWNCLMGGYVRKKRLDDARSLFDRM------PVR-DKISWNIMITGYAQNGLLS 263
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ R F+ + + + +V + G +EA + + M E +EV W +++ G
Sbjct: 264 EARRLFEELPIR-----DVFAWTAMVSGFVQNGMLDEATRIFEEMP-EKNEVSWNAMIAG 317
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/503 (34%), Positives = 275/503 (54%), Gaps = 21/503 (4%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-----------LTYARFIFDHLTTPNT 77
LK Q F T +K+ C L + N L AR +FD + +
Sbjct: 264 LKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDV 323
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+T MI YA+ + A ++ M+ +PN+ V+ +C D+ K VH
Sbjct: 324 VTWTTMIDGYAAHDC-SEEAMEVFELMLL-SHVEPNEVTLIAVVSACSDMGNLEMGKRVH 381
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
++ + + AL++ Y + + AR+LFD M+ ++V SWT+M++GY + GD+
Sbjct: 382 EKVEEKNMRCSLSLHNALLDMYVKCDCLVD-ARELFDRMATKDVYSWTSMVNGYAKCGDL 440
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
++A FD P ++ W+++IAG +QN +++ F M + + P + TLV L
Sbjct: 441 ESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEM---MERGVVPIEHTLVSVL 497
Query: 258 SAIGHTGMLQLGKVIHGY-VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
SA G L LG IH Y V + L + NA++DMY KCGS+ A F ++ L
Sbjct: 498 SACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNL 557
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
SWN+MI +A +G+++ +I VF++M ++ P+ +TF+SLL AC+HGGL+ +GR Y
Sbjct: 558 ISWNTMIAGYAANGRAKQAINVFDQM---RNMGFEPNNITFVSLLTACSHGGLISEGREY 614
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
F M + Y I+P+ HY C+VDLLGR G EEA +++ M ++P E WG+LLN C+++G
Sbjct: 615 FDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHG 674
Query: 437 RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWI 496
+ A + L+ +DP + G ++LAN KW +VR+VR ++KD+ K PG S I
Sbjct: 675 NVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLI 734
Query: 497 EVDKQVHQFHSLDKTHPRTEEIY 519
E+D +F D++HP++EEIY
Sbjct: 735 EIDGGFVEFLVADESHPQSEEIY 757
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/484 (27%), Positives = 211/484 (43%), Gaps = 81/484 (16%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARF 67
N + L I+E C+ + LKQ+Q+ +T G F +++ FC L S +L YA
Sbjct: 153 NVIITNPTLLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHT 212
Query: 68 IFDHLTTPNTYLYTAMITAY--ASQPAHASSAFSLYRDMVR-RGQPQPNQFIYPHVLKSC 124
IF+ + PNT+++ MI Y A +P AFS + M + R + F++ LK+C
Sbjct: 213 IFNRVEQPNTFMWNTMIRGYQNARKPIF---AFSFFVYMFQLRVEMDSRSFVF--ALKAC 267
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ V+ + K GF+ +V L++ Y+ G + AR++FDE SD++VV+W
Sbjct: 268 QQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERG-LLKNARQVFDESSDKDVVTW 326
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T MI GY + A +F+ M +
Sbjct: 327 TTMIDGYAAHDCSEEAMEVFELM----------------------------------LLS 352
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
++ PN+VTL+ +SA G L++GK +H V + + NAL+DMY KC L +A
Sbjct: 353 HVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDA 412
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSE------------NSIC--------------- 337
R FDR + K + SW SM+N +A G E N++C
Sbjct: 413 RELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPK 472
Query: 338 ----VFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
+F EMM + + P T +S+L+AC + G + I +
Sbjct: 473 ESLKLFHEMM---ERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLE 529
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA--EFAVKKLIEI 451
+VD+ + G + A EV M E + + W +++ G GR A F + +
Sbjct: 530 NAIVDMYAKCGSIDAATEVFSTMP-ERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGF 588
Query: 452 DPNN 455
+PNN
Sbjct: 589 EPNN 592
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 152/466 (32%), Positives = 280/466 (60%), Gaps = 9/466 (1%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
+ YAR +FD ++ + + MI Y + AF L+ +M + P++ I +++
Sbjct: 162 INYARNVFDEMSHRDVVTWNTMIERYC-RFGLVDEAFKLFEEM-KDSNVMPDEMILCNIV 219
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+C R + ++ ++++ + TALV Y+ +G + +AR+ F +MS RN+
Sbjct: 220 SACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGC-MDMAREFFRKMSVRNL 278
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
TAM+SGY++ G + +A +FD +D+ W ++I+ ++ +A+ F M
Sbjct: 279 FVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM--- 335
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
I+P+ V++ +SA + G+L K +H ++ NGL+ + I+NALI+MY KCG L
Sbjct: 336 CCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGL 395
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
R F++ ++ + SW+SMIN+ ++HG++ +++ +F M + N+ P+ VTF+ +L
Sbjct: 396 DATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM---KQENVEPNEVTFVGVL 452
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
C+H GLVE+G+ F MT Y I P++EHYGC+VDL GRA EALEV++ M + +
Sbjct: 453 YGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASN 512
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
V+WGSL++ C+I+G + +FA K+++E++P++ G ++++NIY +W++VR +R++
Sbjct: 513 VVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRV 572
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
++++N +K G S I+ + + H+F DK H ++ EIY L+ +V+
Sbjct: 573 MEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVS 618
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 215/459 (46%), Gaps = 33/459 (7%)
Query: 8 LNQTLNQQVLAILERCNHINHLKQLQS-FLTTLGQSQTNFYAFKLVRFCTLKLSNLTYAR 66
+ T +L L C +NH+KQL + L T+ + N + F L + NL+YA
Sbjct: 7 IASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSV--SSSSINLSYAL 64
Query: 67 FIFDHL-TTPNTYLYTAMI--TAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
+F + + P + ++ + + +S+P A L+ +R + +QF + +LK+
Sbjct: 65 NVFSSIPSPPESIVFNPFLRDLSRSSEP----RATILFYQRIRHVGGRLDQFSFLPILKA 120
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
V +H K P VET ++ Y+ G I AR +FDEMS R+VV+
Sbjct: 121 VSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGR-INYARNVFDEMSHRDVVT 179
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPA----WNSVIAGC--TQNGLFSDAISFFRR 237
W MI Y R G + A LF+ M D +V ++++ C T N ++ AI F
Sbjct: 180 WNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL- 238
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
+ +++R + L ++ G + + + +R + F+S A++ Y K
Sbjct: 239 ----IENDVRMDTHLLTALVTMYAGAGCMDMAREF----FRKMSVRNLFVSTAMVSGYSK 290
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG L +A+ FD+ KK L W +MI+++ + ++ VFEEM C I+PD V+
Sbjct: 291 CGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC-CS--GIKPDVVSM 347
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
S+++AC + G++++ + + +E ++ L+++ + G + +V + M
Sbjct: 348 FSVISACANLGILDKAK-WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP 406
Query: 418 IEPDEVVWGSLLNGCKIYGRTD--FAEFAVKKLIEIDPN 454
+ V W S++N ++G + FA K ++PN
Sbjct: 407 -RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444
>gi|357519199|ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 515
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/499 (33%), Positives = 289/499 (57%), Gaps = 12/499 (2%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTPNTYLYTAMITAYA 88
KQ+ + T ++ ++ + +++ F L + YA +F H+ PN + Y ++IT+Y
Sbjct: 5 KQIHAHAITNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNIFDYNSIITSYT 64
Query: 89 SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQY 148
+ + F ++ M+ +PN + ++K+C + + V T +K G
Sbjct: 65 TN-SQFHKLFFVFTKMLNT-NIRPNSHTFTTLVKACVSL---SSLEQVFTLSMKLGNSSD 119
Query: 149 PVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP 208
++++N++S+ + I +AR++FDE S+RNVV WT+++SGY G + A +FD MP
Sbjct: 120 VYFVSSVINAFSKH-SAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKMP 178
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN--IRPNQVTLVCALSAIGHTGML 266
R+ +++++++G +NG FS+ + FR + + ++ N LV L+A G
Sbjct: 179 LRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAF 238
Query: 267 QLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSF 326
+ GK IH YV NGL+ D + ALID Y KCG +K A + F++ K + +W++MI
Sbjct: 239 EEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGL 298
Query: 327 ALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRI 386
A++G ++ ++ +FE+M + +P+ VTF+ +L AC H L + F +M++ Y I
Sbjct: 299 AINGNNKMALELFEKMEKVGP---KPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNI 355
Query: 387 EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
P IEHYGC+VD+L R+G+ ++AL + M IEPD +WGSLLNGC ++G + + K
Sbjct: 356 TPSIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGK 415
Query: 447 KLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFH 506
LIE +P + G ++LAN+Y +GKW+ V +VRK++KDR G S+IE+D+ +H+F
Sbjct: 416 YLIEFEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIEIDQTIHKFF 475
Query: 507 SLDKTHPRTEEIYDALESM 525
+ DK + EIYD L +
Sbjct: 476 ADDKCCLYSREIYDVLSHL 494
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/500 (34%), Positives = 275/500 (55%), Gaps = 42/500 (8%)
Query: 29 LKQLQSFLTT--LGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTPNTYLYTAMIT 85
L+Q+ + L T + S +F K++ FC L ++ YAR +F + PN + + +MI
Sbjct: 4 LRQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNSMIR 63
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
+ + L+R MVRRG P PN F VLK+C V + VH ++KSGF
Sbjct: 64 GCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLKSGF 123
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
P VETALVN Y++ DI A+ +FD
Sbjct: 124 GSSPFVETALVNFYAKCE--------------------------------DIVLASKVFD 151
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
+ DR++ AW+++I+G + GL ++A+ FR M + P++VT+V +SA +G
Sbjct: 152 EITDRNLVAWSTMISGYARIGLVNEALGLFRDMQ---KAGVVPDEVTMVSVISACAASGA 208
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L GK +H Y+ + ++ D +S AL++MY KCG ++ A+ FD K +W+SMI
Sbjct: 209 LDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVG 268
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
A++G +E+++ EE R ++ ++P+ VTFI +L+AC H GLV +GR Y+ M + +
Sbjct: 269 LAINGLAEDAL---EEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLE-FG 324
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
I P +E YGC+VDLL RA E+A +V+ M I P+ V+W +LL GCK D +E
Sbjct: 325 IVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVA 384
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
++L+E++P+N I+L+N+Y + +W+++ +VRK +K PGCS IEVD VH+F
Sbjct: 385 QRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEF 444
Query: 506 HSLDKTHPRTEEIYDALESM 525
D +HP E+ + L +
Sbjct: 445 VMGDWSHPEAMEVREILRDI 464
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 160/403 (39%), Gaps = 82/403 (20%)
Query: 19 ILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L+ C+ ++ L +Q+ + + G + F LV F K ++ A +FD +T
Sbjct: 98 VLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYA-KCEDIVLASKVFDEITDR 156
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
N ++ MI+ YA + + A L+RDM + G P++ V+ +C K
Sbjct: 157 NLVAWSTMISGYA-RIGLVNEALGLFRDMQKAGV-VPDEVTMVSVISACAASGALDTGKW 214
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
VH I K E + TALVN Y++ G I A+++FD M ++ +W++M
Sbjct: 215 VHAYINKQLIETDLELSTALVNMYAKCGC-IERAKEVFDAMPVKDTKAWSSM-------- 265
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
I G NGL DA+ F RM ++PN VT +
Sbjct: 266 -----------------------IVGLAINGLAEDALEEFFRME---EAKVKPNHVTFIG 299
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
LSA H+G++ G+ + G+ + ++D+ + +++A
Sbjct: 300 VLSACAHSGLVSEGRRYWSSMLEFGIVPSMELYGCMVDLLCRASLVEDA----------- 348
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
C E M I P+ V + +LL C +++
Sbjct: 349 ---------------------CTLVETM-----PISPNPVIWRTLLVGCKKSKNLDKSEV 382
Query: 376 YFKLMTKTYRIEPQ-IEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+ + +EP E+Y L +L ++E+ +V K MK
Sbjct: 383 ---VAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMK 422
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 176/517 (34%), Positives = 281/517 (54%), Gaps = 47/517 (9%)
Query: 48 AFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRR 107
A KL+R + + + AR+IFD N + MI +Y + + A S+++ M+
Sbjct: 74 AIKLMRAYSAQ-GETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVE-ALSIFQVMLSC 131
Query: 108 GQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIG 167
P+ + +P VLK+C + R VH IVK G + + ALV Y + G +
Sbjct: 132 AF-NPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGC-LR 189
Query: 168 IARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA-------------------ASL----- 203
ARK+ D+M R+VVSW +M++GY + G +A ASL
Sbjct: 190 EARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVC 249
Query: 204 -------------FDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
F+ M +++ +WN +IA N + ++A+S F +M ++P+
Sbjct: 250 YTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQME---ECGMKPDA 306
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
VT+ L A G L LG+ +H Y+ + L + + NAL+DMY KCG L+EAR FD+
Sbjct: 307 VTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDK 366
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
+ + SW SM++++ GQ +++ +F +M+ D PD + F+S+L+AC+H GL+
Sbjct: 367 MRLRDVVSWTSMMSAYGRSGQGYDAVALFAKML---DSGQNPDSIAFVSVLSACSHTGLL 423
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
+QGR YF++MT+ Y I P+IEH+ C+VDL GRAG EEA +K M +EP+E VWG+LL+
Sbjct: 424 DQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLS 483
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
C+++ + D A L ++ P GY ++L+NIY + G W +V VR +K K
Sbjct: 484 ACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKV 543
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
PG S +E++ QVH F + D+ HP+ + IY L+ +V
Sbjct: 544 PGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVG 580
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 5/194 (2%)
Query: 262 HTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNS 321
+ G+ L K+ V L +D ++ L+ Y G AR FDR+ +K + +N
Sbjct: 48 YPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNV 107
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
MI S+ + ++ +F+ M+ C PD TF +L AC+ + G +
Sbjct: 108 MIRSYVNNNLYVEALSIFQVMLSCA---FNPDHYTFPCVLKACSGLDNLRVGLQVHDAIV 164
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
K ++ + LV + G+ G EA +V+ M D V W S++ G G+ D A
Sbjct: 165 KV-GLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYR-DVVSWNSMVAGYAQSGQFDDA 222
Query: 442 EFAVKKLIEIDPNN 455
K++ ++ N+
Sbjct: 223 LEICKEMDSLNLNH 236
>gi|224119882|ref|XP_002318186.1| predicted protein [Populus trichocarpa]
gi|222858859|gb|EEE96406.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 182/532 (34%), Positives = 290/532 (54%), Gaps = 31/532 (5%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYA-----FKLVRFCTLK------ 58
Q + ++ ++++C I+ L QL ++ T+ + +F++ K + T K
Sbjct: 13 QNYHSIIIKLIKQCKTISQLHQLHAY--TITNTPLSFHSSPSLLTKFLYTLTTKAKSKSS 70
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFI 116
S L YA+ IF+ + P+T+ Y +I + S P A F+ +RR +
Sbjct: 71 TSLLHYAKSIFNSIQNPSTFCYNTIIRVHTLLSFPIPALHFFT----QMRRLSVPLDSHS 126
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSY--SRSGNDIGIARKLFD 174
+P LK+C + + +H Q++K GF V +L++ Y S ND A K+FD
Sbjct: 127 FPFTLKACAQLGGVFSARCLHCQVLKFGFLSDLYVMNSLIHGYMVSDMSND---AYKVFD 183
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
E R+VVS+ +I G+ + GD+ A LFD MP RD +WN++IAGC + +AI
Sbjct: 184 ESPQRDVVSYNVLIDGFVKAGDVVKARELFDLMPVRDSVSWNTIIAGCAKGDYCEEAIEL 243
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
F M M++ IRP+ V LV LSA G L+ GK IH Y+ RN + +D+F+S L+D
Sbjct: 244 FDFM-MDL--EIRPDNVALVSTLSACAQLGELEKGKKIHDYIERNAMKVDTFLSTGLVDF 300
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KCG + A + FD +S K L +WN+M+ A+HG E + F M+ ++PDG
Sbjct: 301 YAKCGCVDIALKIFDSSSDKNLFTWNAMLVGLAMHGYGELLLEYFSRMIEA---GVKPDG 357
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
++ + +L C+H GLV++ R F M Y + + +HYGC+ DLLGRAG ++ +E++K
Sbjct: 358 ISILGVLVGCSHSGLVDEARKLFDEMESVYGVPREPKHYGCMADLLGRAGLIKKVMEMIK 417
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M D VW LL GC+I+G + AE A K L+E+ P++GG +LAN+Y +W++
Sbjct: 418 DMPRGGDMSVWSGLLGGCRIHGDVEIAEKAAKHLMELKPDDGGVYSILANVYANAERWED 477
Query: 475 VRKVRKML-KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
V +R+ L +R K G S I++D H+F + D H +++IY L +
Sbjct: 478 VMNIRRSLSSNRVVTKIAGFSLIQLDGVAHEFIAGDSLHSESDKIYLVLNGI 529
>gi|357146237|ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 167/469 (35%), Positives = 264/469 (56%), Gaps = 11/469 (2%)
Query: 64 YARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
+AR +FD + + TAM A+A A+ A L++DM+ G P+ VL +
Sbjct: 64 HARDLFDEMPNQSLVARTAMARAHAVS-GQAAQALDLFQDMIADGF-MPDNVALAVVLAA 121
Query: 124 CPDVLESRGTK----MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
C + MVH IV G E V T L+ Y G ++ +AR++FD M +
Sbjct: 122 CHGAGSCTARRSPGRMVHAFIVACGIEPDVFVSTELIRVYGERG-EMTVARRVFDSMPTK 180
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
+ ++W M+ Y R DI+ A LF +MP RDV +WN+VIAG G +A+ FR+M
Sbjct: 181 STIAWNTMVHQYVRNKDIEAAYRLFLAMPRRDVVSWNTVIAGYCLVGRCKEALGLFRQMV 240
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
S + PN T+ LSA G L+ G +H Y+ +N ++ + + LIDMY KCG
Sbjct: 241 SPSSCTVHPNGPTMSTVLSACAGAGCLETGIWVHLYIDKNQMNDNGTLDRCLIDMYAKCG 300
Query: 300 SLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
S+ +A + F++ KR L SW ++I A+HG++ + + +F M QD + PD VTF+
Sbjct: 301 SIDKALQVFEKAPGKRDLYSWTTVICGLAMHGRANDVLRMFSMM---QDSGMCPDDVTFV 357
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
+LNAC HGGLV++G +F M + YRI P+IEHYGC++DLLGR GR EA +++ M +
Sbjct: 358 GVLNACAHGGLVDEGLHHFYSMQEKYRITPKIEHYGCMIDLLGRVGRLPEAYRMIQTMPM 417
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
+P+ V+WG+ L+ CK++ + E A ++ +DP++ +M++++Y + W + +
Sbjct: 418 KPNMVIWGAFLSACKVHSSVELGEIAAAEVTRLDPDDPWARVMMSSMYAKAQDWSGLARE 477
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
R+ + KTPGCS + +D +VH+F + HP EI LE++ A
Sbjct: 478 RREMNSLQMKKTPGCSSVALDGEVHEFVAGGNQHPLCAEICSVLETVEA 526
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 146/344 (42%), Gaps = 80/344 (23%)
Query: 136 VHTQIVKSGFEQYPV-VETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H + K+G + TAL+++Y G G AR LFDEM ++++V+ TAM +
Sbjct: 32 IHCLLFKAGLLHAGAHLPTALLSAYGALGRS-GHARDLFDEMPNQSLVARTAMARAHAVS 90
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G A LF M ++D P+ V L
Sbjct: 91 GQAAQALDLFQDM----------------------------------IADGFMPDNVALA 116
Query: 255 CALSAIGHTGMLQL----GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD- 309
L+A G G+++H ++ G++ D F+S LI +YG+ G + ARR FD
Sbjct: 117 VVLAACHGAGSCTARRSPGRMVHAFIVACGIEPDVFVSTELIRVYGERGEMTVARRVFDS 176
Query: 310 -----------------RNS-------------KKRLTSWNSMINSFALHGQSENSICVF 339
RN ++ + SWN++I + L G+ + ++ +F
Sbjct: 177 MPTKSTIAWNTMVHQYVRNKDIEAAYRLFLAMPRRDVVSWNTVIAGYCLVGRCKEALGLF 236
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG----C 395
+M+ + P+G T ++L+AC G +E G + Y + Q+ G C
Sbjct: 237 RQMVSPSSCTVHPNGPTMSTVLSACAGAGCLETG-----IWVHLYIDKNQMNDNGTLDRC 291
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
L+D+ + G ++AL+V + + D W +++ G ++GR +
Sbjct: 292 LIDMYAKCGSIDKALQVFEKAPGKRDLYSWTTVICGLAMHGRAN 335
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 177/508 (34%), Positives = 285/508 (56%), Gaps = 48/508 (9%)
Query: 23 CNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYL 79
C H N L +++ L G Q F A KL+ + ++ AR +FD Y+
Sbjct: 80 CTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSF-FDSIDNARKVFDKTRNRTIYV 138
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV-----LESRGTK 134
Y A+ A S H ++YR M G P ++F Y +VLK+C L ++G +
Sbjct: 139 YNALFRAL-SLAGHGEEVLNMYRRMNSIGIPS-DRFTYTYVLKACVASECFVSLLNKG-R 195
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H I++ G++ Y + T LV+ Y++
Sbjct: 196 EIHAHILRHGYDGYVHIMTTLVDMYAK--------------------------------F 223
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + NA+ +F+ MP ++V +W+++IA +NG +A+ FR + +E D + PN VT+V
Sbjct: 224 GCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQD-LCPNSVTMV 282
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
L A L+ G++IHGY+ R GLD + +AL+ MY +CG L+ +R FD+ K+
Sbjct: 283 SVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKR 342
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ SWNS+I+S+ +HG + +I +FEEM + + P ++F+S+L AC+H GLV++G+
Sbjct: 343 DVVSWNSLISSYGVHGFGKKAIGIFEEMTY---NGVEPSPISFVSVLGACSHAGLVDEGK 399
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
F M + I P +EHY C+VDLLGRA R EEA ++++ M+IEP VWGSLL C+I
Sbjct: 400 MLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCRI 459
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+ + AE A +L +++P N G ++LA+IY E G WD V++V+K+L+ R K PG S
Sbjct: 460 HCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVPGRS 519
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
WIEV ++++ F S+D+ +PR E+++ L
Sbjct: 520 WIEVKRKIYSFVSVDEVNPRMEQLHALL 547
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 148/334 (44%), Gaps = 46/334 (13%)
Query: 109 QPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGI 168
+P P Q Y ++ SC + VH ++++GF+Q P + T L+N YS + I
Sbjct: 65 EPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFF-DSIDN 123
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA----WNSVIAGCTQ 224
ARK+FD+ +R + + A+ + G + +++ M +P+ + V+ C
Sbjct: 124 ARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVA 183
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
+ F +L G+ IH ++ R+G D
Sbjct: 184 SECF----------------------------------VSLLNKGREIHAHILRHGYDGY 209
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
I L+DMY K G + A F++ K + SW++MI +A +G++ ++ +F E+M
Sbjct: 210 VHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELM- 268
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAY--FKLMTKTYRIEPQIEHYGCLVDLLGR 402
+ ++ P+ VT +S+L AC +EQGR + L I P I LV + R
Sbjct: 269 LETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVI---SALVTMYAR 325
Query: 403 AGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
G+ E V M + D V W SL++ ++G
Sbjct: 326 CGKLELGQRVFDQMD-KRDVVSWNSLISSYGVHG 358
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 171/508 (33%), Positives = 283/508 (55%), Gaps = 21/508 (4%)
Query: 25 HINHLKQLQSFLTTLGQSQTNFYAFKLV-RFCTLKLSNLTYARFIFDHLTTPNTYLYTAM 83
++ ++L+ +T G + L+ + L L+++ + +FD + + + M
Sbjct: 152 EVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVM--KMLFDEMPDRDVISWNVM 209
Query: 84 ITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKS 143
I+ Y + A +++ M P++ L +C + K +H V+
Sbjct: 210 ISGYV-KCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIH-HYVRD 267
Query: 144 GFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASL 203
+ P++ AL++ Y + G + IAR +F+EM +NV+ WT M+SGY G+++ A L
Sbjct: 268 NVKFTPIIGNALLDMYCKCGC-LSIARAVFEEMPSKNVICWTTMVSGYANCGELEEAREL 326
Query: 204 FDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHT 263
F+ P RDV W ++I G Q F +A++ FR M + ++P++ +V L+ T
Sbjct: 327 FEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIR---KVKPDKFIVVSLLTGCAQT 383
Query: 264 GMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMI 323
G ++ GK IH ++ N + +D+ + ALI+MY KCG +++A F K SW S+I
Sbjct: 384 GAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSII 443
Query: 324 NSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT 383
A++G++ ++ +F +M + +RPD +TFI +L+AC+HGGLVE+GR +F M
Sbjct: 444 CGLAMNGKTSKALELFSKM---KQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRME 500
Query: 384 YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE------VVWGSLLNGCKIYGR 437
Y+I+P++EHYGCLVDLLGRAG EA E++K + PDE ++GSLL+ C+IYG
Sbjct: 501 YQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKI---PDENKAITVPLYGSLLSACRIYGN 557
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
+ E K+L++ + ++ +LANIY +W++V KVR+ +KD KTPGCS IE
Sbjct: 558 VEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSIE 617
Query: 498 VDKQVHQFHSLDKTHPRTEEIYDALESM 525
VD +H+F S +HP EIY L M
Sbjct: 618 VDSIIHEFFSGHPSHPEMREIYYMLNIM 645
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 229/510 (44%), Gaps = 79/510 (15%)
Query: 3 SVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-N 61
+ TN Q ++ L+ C + HLKQ+ + + +G Q KL+ FCT + N
Sbjct: 27 TFTNPTTGLSQQSCISYLKSCKSMTHLKQIHAQIFRVGLHQDIVSLNKLMAFCTDPFNGN 86
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L YA +F ++ P +Y +I A+A + + + + +R P+ F YP V
Sbjct: 87 LNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSK--LREDGLWPDNFTYPFVF 144
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
K+ + E + + + K+G E V +L++ Y++ + + LFDEM DR+V
Sbjct: 145 KAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLAL-TDVMKMLFDEMPDRDV 203
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
+SW MISGY + C + F DAI+ F RM E
Sbjct: 204 ISWNVMISGYVK----------------------------CRR---FEDAINVFCRMQEE 232
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+ P++ T+V LSA L+LGK IH YV R+ + I NAL+DMY KCG L
Sbjct: 233 --SGLMPDEATVVSTLSACTALKRLELGKKIHHYV-RDNVKFTPIIGNALLDMYCKCGCL 289
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSE---------------------------- 333
AR F+ K + W +M++ +A G+ E
Sbjct: 290 SIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFN 349
Query: 334 ---NSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQI 390
++ +F EM Q ++PD +SLL C G +EQG+ + + + RI
Sbjct: 350 RFDEAVALFREM---QIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDEN-RIPIDA 405
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA--EFAVKKL 448
L+++ + G E+ALE+ G++++ D W S++ G + G+T A F+ K
Sbjct: 406 VVGTALIEMYAKCGFIEKALEIFYGLRVK-DTASWTSIICGLAMNGKTSKALELFSKMKQ 464
Query: 449 IEIDPNNGGY-GIMLANIYGELGKWDEVRK 477
+ P++ + G++ A +G G +E RK
Sbjct: 465 AGVRPDDITFIGVLSACSHG--GLVEEGRK 492
>gi|125595888|gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
Length = 510
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 152/392 (38%), Positives = 251/392 (64%), Gaps = 9/392 (2%)
Query: 137 HTQIVKSGF--EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
H+ ++K G P + +ALV+ Y++S + ARK+FDE++ R+ + A++S Y +
Sbjct: 108 HSLLIKLGHFASSDPFLSSALVSFYAKSKLLVE-ARKVFDELTCRDTAVYNALLSAYAKG 166
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + +A LF+ MPDR+V +W ++++G QNG +A+ F M ++PN++T+
Sbjct: 167 GLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERA--GVQPNELTVS 224
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
L A G ++LG+ + Y GL + +++NAL++MY KCGS+++A + F ++
Sbjct: 225 SVLPACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQ 284
Query: 315 R-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ L SWNSMI +FA+HG ++ +F ++ ++PDG+TF+ ++ ACTHGGLV +G
Sbjct: 285 QDLCSWNSMIMAFAVHGLWREALALFYKLRMA---GVKPDGITFVGVILACTHGGLVNEG 341
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
+ +F M + ++P+IEHYGC+VDLLGRAG E+ ++ M +EPD V+WG+LL C
Sbjct: 342 KLFFDSMEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACS 401
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
+G + AE A+ KLI ++P N ++L+NIY GKWD V +V K+LK+++ K+ G
Sbjct: 402 FHGNVELAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGY 461
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
S+IE+D +H+F DK+HPR EE+Y+ L S+
Sbjct: 462 SFIELDGTMHKFLVEDKSHPRFEEVYNTLNSV 493
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 140/355 (39%), Gaps = 77/355 (21%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A +F+ + N +TAM++ YA H A + +M R QPN+ VL +C
Sbjct: 172 AEKLFEEMPDRNVVSWTAMVSGYAQNGRH-EEAVETFLEMWERAGVQPNELTVSSVLPAC 230
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
V G + + V Y+R + RNV
Sbjct: 231 AAV----GAMELGRK----------------VEEYARGKGLL------------RNVYVA 258
Query: 185 TAMISGYTRVGDIKNAASLFDSMP-DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
A++ Y++ G I+ A +F + +D+ +WNS+I +GL+ +A++ F ++ M
Sbjct: 259 NALLEMYSKCGSIRQAWQVFQGIGRQQDLCSWNSMIMAFAVHGLWREALALFYKLRMA-- 316
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
++P+ +T V + A H G++ GK+ DS E
Sbjct: 317 -GVKPDGITFVGVILACTHGGLVNEGKLF----------FDSM----------------E 349
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A + K R+ + M++ G S + M + PD V + +LL A
Sbjct: 350 AEFSL----KPRIEHYGCMVDLLGRAGLLIESYSLIASM------PVEPDAVIWGALLGA 399
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQ-IEHYGCLVDLLGRAGRFEEALEVVKGMK 417
C+ G VE M K +EPQ + L ++ +G+++ +V K +K
Sbjct: 400 CSFHGNVELAELA---MDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLK 451
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 188/590 (31%), Positives = 299/590 (50%), Gaps = 88/590 (14%)
Query: 11 TLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFD 70
TL +L +C +HL Q S L T G + F+ L+R T +L Y +FD
Sbjct: 6 TLRHSILCCFHKCGTFDHLNQTTSILITSGLAHHTFFLSDLLRSAT---KDLGYTLLLFD 62
Query: 71 HLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
L TP +L+ ++ +++ SQP A+S +R P++ +P +LK+ L
Sbjct: 63 RLATPYIFLWNTIVRSFSASSQPQMVLVAYS----RLRNHGVIPDRHTFPLLLKAFSK-L 117
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVE-------------------------------TALVN 157
+ + IVK G + V+ TAL+N
Sbjct: 118 RNENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALIN 177
Query: 158 SYSRSGNDIGIARKLFDEMSDRNV-----------------------------------V 182
R+G + A + F EM V V
Sbjct: 178 GCLRNGRAVE-ALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRV 236
Query: 183 SW-----TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
W +A++ Y++ G +A +F+ MP R++ +W ++IAG Q + +A+ F+
Sbjct: 237 IWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQE 296
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M +E I PNQ T+ AL+A G L G+ +H YV R+ L L+S + AL+DMY K
Sbjct: 297 MIIE---GIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSK 353
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG + EA F++ K + W +MIN A+ G + +S+ +F +M+R + ++P+GVTF
Sbjct: 354 CGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSR---VQPNGVTF 410
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+ +L+AC HGGLV++G F+LM YR+EP ++HYGC+VDLLGRAGR EEA++ ++ M
Sbjct: 411 LGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMP 470
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+EP VWG+L +GC I+ + E LI++ P++ G I+LAN+Y KW+
Sbjct: 471 MEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAAN 530
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
VR+++K + K+P CSWIEV+ +H+F + DK+H + +Y L S+ A
Sbjct: 531 VRRLMKGKGVDKSPACSWIEVNGVIHEFIAFDKSHIESINVYMMLGSVTA 580
>gi|356573508|ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Glycine max]
Length = 629
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 168/468 (35%), Positives = 266/468 (56%), Gaps = 14/468 (2%)
Query: 63 TYARFIFDHL--TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
++AR +FD + + ++ YTA+I +H A Y M +R P +
Sbjct: 66 SHARKLFDRIPHSHKDSVDYTALIRC-----SHPLDALRFYLQMRQRALPLDGVALIC-A 119
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
L +C + +S +H +VK GF ++ V +++ Y + G +G AR++F+E+ + +
Sbjct: 120 LGACSKLGDSNLVPQMHVGVVKFGFLRHTKVLNGVMDGYVKCGL-VGEARRVFEEIEEPS 178
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
VVSWT ++ G + +++ +FD MP+R+ AW +I G +G +A + M
Sbjct: 179 VVSWTVVLEGVVKCEGVESGKVVFDEMPERNEVAWTVLIKGYVGSGFTKEAFLLLKEMVF 238
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN-GLDLDSFISNALIDMYGKCG 299
N +TL LSA +G + +G+ +H Y + G DL + +L+DMY KCG
Sbjct: 239 GCGFGFGLNSITLCSVLSACSQSGDVSVGRWVHCYAVKAVGWDLGVMVGTSLVDMYAKCG 298
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
+ A F ++ + +WN+M+ A+HG + V EM C ++PD VTF++
Sbjct: 299 RISAALMVFRHMPRRNVVAWNAMLCGLAMHGMGK----VVVEMFACMVEEVKPDAVTFMA 354
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
LL++C+H GLVEQG YF + + Y I P+IEHY C+VDLLGRAGR EEA ++VK + I
Sbjct: 355 LLSSCSHSGLVEQGWQYFHDLERAYGIRPEIEHYACMVDLLGRAGRLEEAEDLVKKLPIP 414
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVR 479
P+EVV GSLL C +G+ E +++L+++DP N Y I+L+N+Y GK D+ +R
Sbjct: 415 PNEVVLGSLLGACYAHGKLRLGEKIMRELVQMDPLNTEYHILLSNMYALCGKADKANSLR 474
Query: 480 KMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
K+LK+R K PG S I VD Q+H+F + DK+HPRT +IY L+ M+
Sbjct: 475 KVLKNRGIRKVPGMSSIYVDGQLHRFIAGDKSHPRTADIYMKLDDMIC 522
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 25/173 (14%)
Query: 269 GKVIHGYVYRNGLDLD--SFISNALIDMYGKCGSLKEARRAFDR--NSKKRLTSWNSMIN 324
G+ +H +GL SF+ NAL+ +Y C AR+ FDR +S K + ++I
Sbjct: 31 GEQLHAAATVSGLLFSPSSFLLNALLHLYASCPLPSHARKLFDRIPHSHKDSVDYTALI- 89
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG---LVEQ---GRAYFK 378
+ + + ++ + + DGV I L AC+ G LV Q G F
Sbjct: 90 ------RCSHPLDALRFYLQMRQRALPLDGVALICALGACSKLGDSNLVPQMHVGVVKFG 143
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ T + ++ Y L+G A R E +E EP V W +L G
Sbjct: 144 FLRHTKVLNGVMDGY-VKCGLVGEARRVFEEIE-------EPSVVSWTVVLEG 188
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 184/519 (35%), Positives = 287/519 (55%), Gaps = 19/519 (3%)
Query: 15 QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
+ A+L C + ++ + Q AF+L R L A +
Sbjct: 26 RAAALLAGCASASRAAEIHAAAVRASVDQDKAVAFRLQRAYAAS-GRLDLAVALLRRTPD 84
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
P YT+ I A++S+ H ++ L ++ R P L +C + R
Sbjct: 85 PTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASLPACGCLAVGRA-- 142
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM-SDRNVVSWTAMISGYTR 193
+H VK P V TAL+ Y+R+G AR LFD M D +VVS TAM+S Y +
Sbjct: 143 -LHGYAVKLALSGEPYVATALLGMYARAGEAA-AARALFDGMRPDPHVVSVTAMLSCYAK 200
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
+G + +A LFD++P +D+ WN+++ G TQ+G S+A+ FR+M + + P++V++
Sbjct: 201 MGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQM---LRSGVEPDEVSV 257
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNG----LDLDSFISNALIDMYGKCGSLKEARRAF- 308
V ALSA+ G + G+ +H +V G + L++ + AL+DMY KCGSL+EA F
Sbjct: 258 VLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFR 317
Query: 309 --DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
+ + +WN+MIN +A+HG+S ++ F ++ R Q + P +TFI +LNAC+H
Sbjct: 318 DLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQL-RAQ--GLWPTDITFIGVLNACSH 374
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GLV++GRA F M + Y I P++EHYGC+VDLLGRAGR EEA ++V+ MK +PD +W
Sbjct: 375 SGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDAAMWA 434
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
SLL C+++ + L+ N G ++L+N+Y GKW EV +VR M++
Sbjct: 435 SLLGACRLHKNLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRVRSMMRASG 494
Query: 487 AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PGCS +EV ++V +F + D++HPR+ EIY LE +
Sbjct: 495 VQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEV 533
>gi|242091784|ref|XP_002436382.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
gi|241914605|gb|EER87749.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
Length = 507
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 159/397 (40%), Positives = 252/397 (63%), Gaps = 11/397 (2%)
Query: 134 KMVHTQIVKSGFEQY---PVVETALVNSYSRSGNDIGIARKLFDEMSDR-NVVSWTAMIS 189
++ H + KSG P + +ALV SY+RSG+ + +R++FDE+ + + A++S
Sbjct: 101 RLAHALLSKSGHAASSGDPYLASALVASYARSGH-LAESRRVFDELPPHSDAAARNALLS 159
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
Y R G + +A SLF MPDR+V +W ++++G QNG +A+ F + M +RPN
Sbjct: 160 AYARCGRVDDAESLFAGMPDRNVISWTAMVSGYAQNGRHEEAVRTF--LEMWEGCGVRPN 217
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+VT+ L A G L LG+ + Y G+ + +++NAL++MY KCGS++ A F
Sbjct: 218 EVTVSSVLPACAAVGALALGRKVERYARGRGMLTNVYVANALVEMYAKCGSIRRAWMVFR 277
Query: 310 RNSKKR-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
K+R L SWNSMI +FA+HG + +F ++ + +PDG+TF+ ++ ACTHGG
Sbjct: 278 GIGKQRDLCSWNSMIMAFAVHGLWREVLGLFHKL---RMTGAKPDGITFVGVILACTHGG 334
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
LV++G+ F M + + ++P+IEHYGC+VDLLGRAG +EA ++ M +EPD V+WG+L
Sbjct: 335 LVDEGKLLFNSMREEFGLKPRIEHYGCMVDLLGRAGLLKEADSLIASMPMEPDAVIWGAL 394
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L C +G + AE AV+KL+ ++P N ++L+NIY GKWD V +V K+LK+++
Sbjct: 395 LGACSFHGNLELAEVAVEKLMRLEPQNTANLVILSNIYASHGKWDGVAQVWKLLKEKDHK 454
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K+ G S+IE+D ++H+F DK+HP E +YD L+S+
Sbjct: 455 KSAGYSFIELDGRMHKFLVEDKSHPIYEMVYDTLDSI 491
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A +F + N +TAM++ YA H A + +M +PN+ VL +C
Sbjct: 170 AESLFAGMPDRNVISWTAMVSGYAQNGRH-EEAVRTFLEMWEGCGVRPNEVTVSSVLPAC 228
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
V G + ++ E+Y L N Y +
Sbjct: 229 AAV----GALALGRKV-----ERYARGRGMLTNVYVAN---------------------- 257
Query: 185 TAMISGYTRVGDIKNAASLFDSM-PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
A++ Y + G I+ A +F + RD+ +WNS+I +GL+ + + F ++ M
Sbjct: 258 -ALVEMYAKCGSIRRAWMVFRGIGKQRDLCSWNSMIMAFAVHGLWREVLGLFHKLRM--- 313
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN--ALIDMYGKCGSL 301
+P+ +T V + A H G++ GK++ + R L I + ++D+ G+ G L
Sbjct: 314 TGAKPDGITFVGVILACTHGGLVDEGKLLFNSM-REEFGLKPRIEHYGCMVDLLGRAGLL 372
Query: 302 KEARRAF-DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
KEA + W +++ + + HG E + E++MR + N
Sbjct: 373 KEADSLIASMPMEPDAVIWGALLGACSFHGNLELAEVAVEKLMRLEPQN 421
>gi|6983870|dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125553873|gb|EAY99478.1| hypothetical protein OsI_21446 [Oryza sativa Indica Group]
Length = 510
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 152/392 (38%), Positives = 251/392 (64%), Gaps = 9/392 (2%)
Query: 137 HTQIVKSGF--EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
H+ ++K G P + +ALV+ Y++S + ARK+FDE++ R+ + A++S Y +
Sbjct: 108 HSLLIKLGHFASSDPFLSSALVSFYAKSKLLVE-ARKVFDELTCRDTAVYNALLSAYAKG 166
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + +A LF+ MPDR+V +W ++++G QNG +A+ F M ++PN++T+
Sbjct: 167 GLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERA--GVQPNELTVS 224
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
L A G ++LG+ + Y GL + +++NAL++MY KCGS+++A + F ++
Sbjct: 225 SVLPACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQ 284
Query: 315 R-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ L SWNSMI +FA+HG ++ +F ++ ++PDG+TF+ ++ ACTHGGLV +G
Sbjct: 285 QDLCSWNSMIMAFAVHGLWREALALFYKLRMA---GVKPDGITFVGVILACTHGGLVNEG 341
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
+ +F M + ++P+IEHYGC+VDLLGRAG E+ ++ M +EPD V+WG+LL C
Sbjct: 342 KLFFDSMEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACS 401
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
+G + AE A+ KLI ++P N ++L+NIY GKWD V +V K+LK+++ K+ G
Sbjct: 402 FHGNVELAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGY 461
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
S+IE+D +H+F DK+HPR EE+Y+ L S+
Sbjct: 462 SFIELDGTMHKFLVEDKSHPRFEEVYNTLNSV 493
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 140/355 (39%), Gaps = 77/355 (21%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A +F+ + N +TAM++ YA H A + +M R QPN+ VL +C
Sbjct: 172 AEKLFEEMPDRNVVSWTAMVSGYAQNGRH-EEAVETFLEMWERAGVQPNELTVSSVLPAC 230
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
V G + + V Y+R + RNV
Sbjct: 231 AAV----GAMELGRK----------------VEEYARGKGLL------------RNVYVA 258
Query: 185 TAMISGYTRVGDIKNAASLFDSMP-DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
A++ Y++ G I+ A +F + +D+ +WNS+I +GL+ +A++ F ++ M
Sbjct: 259 NALLEMYSKCGSIRQAWQVFQGIGRQQDLCSWNSMIMAFAVHGLWREALALFYKLRMA-- 316
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
++P+ +T V + A H G++ GK+ DS E
Sbjct: 317 -GVKPDGITFVGVILACTHGGLVNEGKLF----------FDSM----------------E 349
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A + K R+ + M++ G S + M + PD V + +LL A
Sbjct: 350 AEFSL----KPRIEHYGCMVDLLGRAGLLIESYSLIASM------PVEPDAVIWGALLGA 399
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQ-IEHYGCLVDLLGRAGRFEEALEVVKGMK 417
C+ G VE M K +EPQ + L ++ +G+++ +V K +K
Sbjct: 400 CSFHGNVELAELA---MDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLK 451
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 190/571 (33%), Positives = 283/571 (49%), Gaps = 78/571 (13%)
Query: 24 NHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAM 83
N N LK + + L L Q N Y L+ C L + Y++ +F + PN +L+ M
Sbjct: 27 NFFNQLKHIHARLLRLHLDQDN-YLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTM 85
Query: 84 ITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKS 143
I S+ A LY M R G PN F P VLK+C L+ R +H+ +VK+
Sbjct: 86 IRGLVSKDCF-DDAIHLYGSM-RGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKA 143
Query: 144 GFEQYPVVE-------------------------------TALVNSYSRSGN---DIGIA 169
G++ V+ TA++ Y SG+ IG
Sbjct: 144 GYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAF 203
Query: 170 RKLF-----------------------------------DEMSDRNVVSWTAMISGYTRV 194
+KL D RNV T+++ Y +
Sbjct: 204 KKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKC 263
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G+++ A +F +MP++D+ +W+++I G NGL A+ F +M S+N++P+ T+V
Sbjct: 264 GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQ---SENLKPDCYTMV 320
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
LSA G L LG + RN + + ALIDMY KCGS+ +A F KK
Sbjct: 321 GVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKK 380
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
WN+M+ +++G ++ VF + H IRPD TFI LL CTHGG V +GR
Sbjct: 381 DRVVWNAMMVGLSMNGHAK---AVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGR 437
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
+F M + + + P IEHYGC+VDLLGRAG EA +++ M ++P+ VVWG+LL GCK+
Sbjct: 438 QFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKL 497
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+ T AE +KKLIE++P N G + L+NIY +W+E K+R +K++ K CS
Sbjct: 498 HKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACS 557
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
WIE+D VH+F DK+H +E+IY L+ +
Sbjct: 558 WIEIDGIVHEFLVGDKSHWLSEKIYAKLDEL 588
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 109/257 (42%), Gaps = 10/257 (3%)
Query: 15 QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
+VLA R + + +++ G + F A L+ +K NL A IF +
Sbjct: 220 KVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDM-YVKCGNLERANLIFSAMPE 278
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
+ ++ MI YA A L+ M + +P+ + VL +C +
Sbjct: 279 KDIVSWSTMIQGYAFN-GLPQQALDLFFQM-QSENLKPDCYTMVGVLSACATLGALDLGI 336
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+ + ++ F PV+ TAL++ YS+ G+ + A ++F M ++ V W AM+ G +
Sbjct: 337 WASSLMDRNEFLSNPVLGTALIDMYSKCGS-VTQAWEIFTAMKKKDRVVWNAMMVGLSMN 395
Query: 195 GDIKNAASLFDSMPDRDV-PAWNSVIA---GCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
G K SLF + + P N+ I GCT G ++ FF M S + P+
Sbjct: 396 GHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFS--LTPSI 453
Query: 251 VTLVCALSAIGHTGMLQ 267
C + +G G+L
Sbjct: 454 EHYGCMVDLLGRAGLLN 470
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 282/473 (59%), Gaps = 13/473 (2%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
+L +R FD + N + +MI YA Q SL+ +M R+G + ++F +
Sbjct: 162 SLGDSRRFFDEMVDRNVVSWNSMIGGYA-QAGDTREVCSLFGEMRRQGFLE-DEFTLVSL 219
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
L +C ++VH +++ SG ++E+ALV+ Y + G D+ +AR+ F+ M ++
Sbjct: 220 LIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCG-DLWMARRCFEMMPIKS 278
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
VVSWT+M+ T+ G + A FD MP+R++ +WN++I+ Q G +A+ + +M
Sbjct: 279 VVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQ- 337
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
S + P+++TLV LSA G G L +GK++H Y+ N + D + N+L+DMY KCG
Sbjct: 338 --SQGLAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDNIYNPDVSLVNSLLDMYAKCGQ 395
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+ A F + + SWN +I A+HG++ ++I F M+ + PDG+TF++L
Sbjct: 396 VDTAISLFSEMCNRNVVSWNVIIGGLAMHGRALDTITFFRSMV---TDSFAPDGITFVAL 452
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC+HGGL+E G+ YF+ M Y ++ ++EHY C+VDLLGR G E+A+ ++K M ++P
Sbjct: 453 LSACSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKP 512
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
D VVWG+LL C+I+G +K+L+E++ +GG ++++N+ E +W++++++RK
Sbjct: 513 DVVVWGALLGACRIHGNVKIGRQVIKQLLELEGISGGLFVLISNLLYETHQWEDMKRLRK 572
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALES----MVALH 529
++K+ K G S IE++ +H+F D H R+ EIY ++ +++LH
Sbjct: 573 LMKEWGTRKDMGVSSIEINNSIHEFGVEDIRHERSSEIYAVVDQLSYHLISLH 625
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 200/451 (44%), Gaps = 71/451 (15%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN---LTYARFIFDHLTTP 75
+L +C I L QL + L G S + L +C L + L +AR +FD + P
Sbjct: 17 LLRQCRSIQRLNQLHAHLLVHG-SLSAASDLLLASYCALAKAGHGVLCHARRLFDGIPGP 75
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ +Y +I AY + A L+R M+RRG PN+F P V+K+C
Sbjct: 76 DRVMYNTIIRAYCNSSC-PREALRLHRGMLRRG-ILPNEFTLPFVVKACTIAQAREHALA 133
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
VH ++ G V AL++SY+ +G+ +G +R+ FDEM DRNVVSW +MI GY + G
Sbjct: 134 VHGVALRLGLVGQVFVGNALLHSYASAGS-LGDSRRFFDEMVDRNVVSWNSMIGGYAQAG 192
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
D + SLF M RR G ++ TLV
Sbjct: 193 DTREVCSLFGEM----------------------------RRQG------FLEDEFTLVS 218
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
L A G L++G+++H + +G +D + +AL+DMYGKCG L ARR F+ K
Sbjct: 219 LLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMARRCFEMMPIKS 278
Query: 316 LTSWNSMINSFALHGQSENSICVFEE-----------MMRC-----------------QD 347
+ SW SM+ + HG + C F+ M+ C Q
Sbjct: 279 VVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQS 338
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE 407
+ PD +T +++L+A G + G+ L + P + L+D+ + G+ +
Sbjct: 339 QGLAPDEITLVAVLSASGRIGDLTVGK-MVHLYIRDNIYNPDVSLVNSLLDMYAKCGQVD 397
Query: 408 EALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
A+ + M + V W ++ G ++GR
Sbjct: 398 TAISLFSEM-CNRNVVSWNVIIGGLAMHGRA 427
>gi|255540011|ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550185|gb|EEF51672.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 181/537 (33%), Positives = 290/537 (54%), Gaps = 21/537 (3%)
Query: 1 MVSVTNQLNQTLNQQVLAILERCNHINHLKQL--QSF------LTTLGQSQT---NFYAF 49
M+ ++ L+ + ++ +C IN L Q+ Q+F LT Q YA
Sbjct: 15 MIITSHSQIYNLSHSIYTLIRQCKTINQLYQVHAQAFTKGLLSLTACSSPQILTKILYAL 74
Query: 50 KLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQ 109
+ S L YA FD++ P+T+ Y +I + + A SA + M R
Sbjct: 75 TTIPTPKSSFSLLHYAVSTFDNIQNPSTFCYNVIIRLHTLHSS-ALSALHFFLQMRRFSV 133
Query: 110 PQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIA 169
P P+ YP LK+C + + +H+Q+ K GF V +L++ YS + + A
Sbjct: 134 P-PDFHSYPFALKACAHLRVLSLAQCLHSQVFKFGFVSDLYVINSLIHVYSLF-DCLNYA 191
Query: 170 RKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
++FDE SDR+VVS+ A++ G+ + G+ A +FD MP RD +W S+IAG Q +
Sbjct: 192 CQVFDESSDRDVVSYNALVDGFVKAGEFVKAREIFDLMPMRDSVSWGSLIAGYAQGSYCN 251
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
+AI F M + + P+ + LV ALSA G L+ GK IH Y+ +N + DSF+S
Sbjct: 252 EAIGLFDLM---MGLKLEPDNIALVSALSACAQLGELEKGKQIHDYIKKNRIQADSFLST 308
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
L+D Y K G + A + F+ + K L +WN+M+ A+HG S + F MM +
Sbjct: 309 GLVDFYAKSGCIDTAIKVFELSPDKSLITWNAMLIGIAMHGNSHLLLNYFSRMM---EAG 365
Query: 350 IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEA 409
I+PDG++F+ +L C+HGGLV++ + F M Y + +++HYGC+ DLL RAG +EA
Sbjct: 366 IKPDGISFLGVLVGCSHGGLVDEAKKLFDEMESIYGVRRELKHYGCMADLLARAGLIKEA 425
Query: 410 LEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGEL 469
+E+ KG+ + D VW LL GC+I+G + AE A K+++E+ P +GG +LAN+Y
Sbjct: 426 VELTKGLPMGGDIFVWSGLLGGCRIHGNIEIAEQAAKQVMELKPEDGGVYSILANVYANA 485
Query: 470 GKWDEVRKVRK-MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+W++V K+R+ M +R K G S I++ H+F + + H ++ EIY L+ +
Sbjct: 486 DRWEDVVKIRRSMSSNRAVKKNAGRSSIQLGGLTHEFLAGESLHAQSSEIYMVLDGI 542
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 187/515 (36%), Positives = 289/515 (56%), Gaps = 19/515 (3%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
A+L C +L + G Q F+L R L A + P
Sbjct: 35 ALLAGCASARRASELHAAAVRAGVDQDKAVDFRLQRAYAAS-GRLDLAVALLRRTPDPTA 93
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
YT+ I A++S+ H +A +L +M+ P L +C + R +H
Sbjct: 94 VFYTSAIHAHSSRGLH-HAALALLSEMLLSHGLLPTAHTLSASLPACGGLAVGRA---LH 149
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS-DRNVVSWTAMISGYTRVGD 196
VK P V TAL+ Y+R+G+ AR LFD M D +VVS TAM++ Y ++G
Sbjct: 150 GYAVKLALSGEPYVATALLGMYARAGDAA-AARVLFDGMQPDPHVVSVTAMLTCYAKMGL 208
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
+ +A SLFD +P +D+ WN+++ G TQ+G S+A+ FRRM + + P++V++V A
Sbjct: 209 LDDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFRRM---LRSGVEPDEVSVVLA 265
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNG---LDLDSFISNALIDMYGKCGSLKEARRAF-DRNS 312
LSA+ G + G+ +H +V + + L++ + ALIDMY KCGSL++A F D +
Sbjct: 266 LSAVAQLGTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDLGA 325
Query: 313 KKR-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
R + +WN+M+N +A+HG S ++ F ++ R Q + P +TFI +LNAC+H GLV+
Sbjct: 326 GDRDIVAWNAMVNGYAMHGHSREALAAFGQL-RAQ--GLWPTDITFIGVLNACSHSGLVD 382
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM-KIEPDEVVWGSLLN 430
+GR F+ M + Y IEP++EHYGC+VDLLGRAGR EEA E+V+ M + +PD V+W SLL
Sbjct: 383 EGRELFRSMAEEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSMTRTKPDAVMWASLLA 442
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
C+++ + + L+ N G ++L+N+Y G W EV +VR M++ K
Sbjct: 443 ACRLHKNMELGQRIADHLVANGLANSGTYVLLSNMYAAAGNWREVGRVRAMMRASGIQKE 502
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PGCS +EV ++V +F + D++HPR EIY LE +
Sbjct: 503 PGCSAVEVGRRVVEFVAGDRSHPRAAEIYAKLEEV 537
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/554 (31%), Positives = 296/554 (53%), Gaps = 50/554 (9%)
Query: 13 NQQVLAILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
N+ + + ++ C ++ LK Q+ + G +F LV +K + + A +F
Sbjct: 114 NRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHM-YIKCNQIRDAHRVF 172
Query: 70 DHLTTPNTYLYTAMITAYASQPA-------------------------------HA---S 95
D + P+ ++A++ AYA Q H+ S
Sbjct: 173 DRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYS 232
Query: 96 SAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETAL 155
A ++ DM RG +P+ VL + D+ + ++H ++K G V +AL
Sbjct: 233 EAVLMFLDMHLRGF-EPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSAL 291
Query: 156 VNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR----D 211
++ Y + ++ ++FD+M +V S A I G +R G ++++ LF + D+ +
Sbjct: 292 IDMYGKCSCTSEMS-QVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELN 350
Query: 212 VPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKV 271
V +W S+IA C+QNG +A+ FR M + ++PN VT+ C L A G+ L GK
Sbjct: 351 VVSWTSMIACCSQNGRDIEALELFREMQIA---GVKPNSVTIPCLLPACGNIAALMHGKA 407
Query: 272 IHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
H + R G+ D ++ +ALIDMY KCG ++ +R FD K L WN++I +A+HG+
Sbjct: 408 AHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGK 467
Query: 332 SENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE 391
++ ++ +F+ M R +PD ++F +L+AC+ GL E+G YF M+ Y IE ++E
Sbjct: 468 AKEAMEIFDLMQRSGQ---KPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVE 524
Query: 392 HYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
HY C+V LL RAG+ E+A +++ M + PD VWG+LL+ C+++ E A +KL E+
Sbjct: 525 HYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFEL 584
Query: 452 DPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKT 511
+P+N G I+L+NIY G W+EV +VR M+K++ K PGCSWIEV +VH + DK+
Sbjct: 585 EPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKS 644
Query: 512 HPRTEEIYDALESM 525
HP+ +I + L+ +
Sbjct: 645 HPQMTQIIEKLDKL 658
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 222/480 (46%), Gaps = 59/480 (12%)
Query: 11 TLNQQVLAILERCNH--INHLKQLQSFLTTLGQSQTNFYA---FKLVRFCTLKLS----N 61
+L+ Q LA+L+ H N L + L+ Q+ + F T LS N
Sbjct: 2 SLSAQALALLDSVQHTIFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANN 61
Query: 62 LTYA--RFIFDHLTTPNTYLYTAMITAYAS--QPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+ +A + D + PN + ++ +I A++ Q HA S FS M+ RG P+ +
Sbjct: 62 MCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFS---QMLTRGL-MPDNRVL 117
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
P +K+C + + + VH SGF+ V+++LV+ Y + N I A ++FD M
Sbjct: 118 PSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKC-NQIRDAHRVFDRMF 176
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVP----AWNSVIAGCTQNGLFSDAIS 233
+ +VVSW+A+++ Y R G + A LF M D V +WN +IAG +GL+S+A+
Sbjct: 177 EPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVL 236
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
F M + P+ T+ L A+G L +G +IHGYV + GL D +S+ALID
Sbjct: 237 MFLDMHLR---GFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALID 293
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEE------------ 341
MYGKC E + FD+ + S N+ I + +GQ E+S+ +F +
Sbjct: 294 MYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVS 353
Query: 342 ---MMRCQDHN-----------------IRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
M+ C N ++P+ VT LL AC + + G+A
Sbjct: 354 WTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSL 413
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+ I + L+D+ + GR + + G+ + + V W +++ G ++G+ A
Sbjct: 414 RR-GISTDVYVGSALIDMYAKCGRIQASRICFDGIPTK-NLVCWNAVIAGYAMHGKAKEA 471
>gi|296083752|emb|CBI23741.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 172/480 (35%), Positives = 278/480 (57%), Gaps = 10/480 (2%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
+Q S + +LG SQ + A KL+ F + ++R +FD L N +L+ ++I YA
Sbjct: 43 RQSHSRILSLGLSQNSLLATKLI-FAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYAK 101
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
+ + AF L+ M P+ F + K ++ K +H + ++ GF
Sbjct: 102 NRLY-NEAFQLFNQMCS-SDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDT 159
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
VV ++++ Y + GN +RK+FDEM+ RN SW +I+GY G++ +FD M
Sbjct: 160 VVANSIMSMYCKCGN-FEESRKVFDEMTIRNSGSWNVLIAGYAVSGNLVVGRRVFDRMKC 218
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
R+V +W ++I G +NG +A+S FR M+V D I PN+V+LV L A L G
Sbjct: 219 RNVFSWTAMINGYVENGDSDEALSLFR--DMQVIDGIEPNRVSLVSVLPACSSFSGLLSG 276
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK-KRLTSWNSMINSFAL 328
+ IHG+ R L+ + + NALIDMY KCGSL ARR F+ +S K SW+SMI+ + L
Sbjct: 277 RQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGL 336
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
HG+ + +I ++++M++ IRPD +T + +L+AC+ GLV +G + + Y IEP
Sbjct: 337 HGKGQEAILLYDKMLQA---GIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEP 393
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL 448
+E + C+VD+LGRAG+ + AL+ +K M +EP VWG+L++ I+G + E A + L
Sbjct: 394 TLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFL 453
Query: 449 IEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSL 508
I+++P N + ++N+Y +WD V +VR+M+KD+ K PGCSWI ++ + H F++L
Sbjct: 454 IQLEPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCFYTL 513
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 9/173 (5%)
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L+L + H + GL +S ++ LI Y C +R FD K + WNS+IN
Sbjct: 39 LKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLING 98
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
+A + + +F +M C ++ PD T +L + G + G++ + K+ R
Sbjct: 99 YAKNRLYNEAFQLFNQM--CSS-DVLPDDFTLSTLSKVSSELGALFSGKS---IHGKSIR 152
Query: 386 IE--PQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
I ++ + + G FEE+ +V M I + W L+ G + G
Sbjct: 153 IGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIR-NSGSWNVLIAGYAVSG 204
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 167/477 (35%), Positives = 269/477 (56%), Gaps = 16/477 (3%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K N+ A+ +FD + N + ++IT Y Q A A +++ M+ +P++
Sbjct: 199 KCGNVNDAQQVFDEMGDRNVVSWNSLITCY-EQNGPAVEALKVFQVMLE-SWVEPDEVTL 256
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVK-SGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
V+ +C + + + VH ++VK ++ A V+ Y++ I AR +FD M
Sbjct: 257 ASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSR-IKEARFIFDSM 315
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
RNV++ T+M+SGY K A +F M +R+V +WN++IAG TQNG +A+S F
Sbjct: 316 PIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK------VIHGYVYRNGLDLDSFISNA 290
+ E ++ P T L A L LG + HG+ +++G + D F+ N+
Sbjct: 376 LLKRE---SVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 291 LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
LIDMY KCG ++E F + ++ SWN+MI FA +G ++ +F EM+ D
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML---DSGE 489
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
+PD +T I +L+AC H G VE+GR YF MT+ + + P +HY C+VDLLGRAG EEA
Sbjct: 490 KPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAK 549
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELG 470
+++ M ++PD V+WGSLL CK++ ++ +KL E++ +N G ++L+N+Y ELG
Sbjct: 550 SIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELG 609
Query: 471 KWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
KW + VRK+++ K PGCSWI++ H F DK+HPR ++I+ L+ ++A
Sbjct: 610 KWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLLDILIA 666
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 175/335 (52%), Gaps = 9/335 (2%)
Query: 117 YPHVLKSCPDV-LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
+ +L SC + L + + VH ++KSGF ++ L+++Y++ G+ + R+LFD+
Sbjct: 22 FAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGS-LEDGRQLFDK 80
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
M RNV +W ++++G T++G + A SLF SMP+RD WNS+++G Q+ +A+ +F
Sbjct: 81 MPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYF 140
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
M E N+ T LSA + G IH + ++ D +I +AL+DMY
Sbjct: 141 AMMHKE---GFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMY 197
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCG++ +A++ FD + + SWNS+I + +G + ++ VF+ M+ + + PD V
Sbjct: 198 SKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVML---ESWVEPDEV 254
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
T S+++AC ++ G+ + K ++ I VD+ + R +EA +
Sbjct: 255 TLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS 314
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE 450
M I + + S+++G + T A K+ E
Sbjct: 315 MPIR-NVIAETSMVSGYAMAASTKAARLMFTKMAE 348
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 187/426 (43%), Gaps = 78/426 (18%)
Query: 43 QTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYR 102
Q N + + V KL L A +F + + + +M++ +A + + Y
Sbjct: 83 QRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALY--YF 140
Query: 103 DMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRS 162
M+ + N++ + L +C + + +H+ I KS + +ALV+ YS+
Sbjct: 141 AMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKC 200
Query: 163 GNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC 222
GN + A+++FDEM DRNVVSW ++I+ Y
Sbjct: 201 GN-VNDAQQVFDEMGDRNVVSWNSLITCY------------------------------- 228
Query: 223 TQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR-NGL 281
QNG +A+ F+ M + + P++VTL +SA +++G+ +H V + + L
Sbjct: 229 EQNGPAVEALKVFQVM---LESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKL 285
Query: 282 DLDSFISNALIDMYGKCGSLKEARRAFD----RN-------------------------- 311
D +SNA +DMY KC +KEAR FD RN
Sbjct: 286 RNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTK 345
Query: 312 -SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
+++ + SWN++I + +G++E ++ +F + R ++ P TF ++L AC +
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKR---ESVCPTHYTFANILKACADLADL 402
Query: 371 EQG-RAYFKLMTKTYRI----EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
G +A+ ++ ++ E I L+D+ + G EE V + M +E D V W
Sbjct: 403 HLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSW 461
Query: 426 GSLLNG 431
+++ G
Sbjct: 462 NAMIIG 467
>gi|413944077|gb|AFW76726.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 646
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 165/462 (35%), Positives = 263/462 (56%), Gaps = 9/462 (1%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L AR +FD + + +T +I YA + A+ ++ MV PN+
Sbjct: 182 LPDARKLFDEMADRDVVSWTTLIDGYA-RGGLPDEAWRVFCRMVVAESVWPNEVTLVAAA 240
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+ + + VH IV+SG +E ALV+ + + G + A+++FD M ++V
Sbjct: 241 SAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGC-VAAAKEVFDGMPIKDV 299
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
SWT+M+S Y + GD++NAA LF +P+R+V +W+ ++A + + +AI F M
Sbjct: 300 YSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDM--- 356
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG-YVYRNGLDLDSFISNALIDMYGKCGS 300
++ + P TLV LSA L +G ++ Y+ + ++L +SNA IDM+ KCG
Sbjct: 357 IAAGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGD 416
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+ A R F K + SWN+MI + LHGQ E ++ +F+E + + I PD T+I +
Sbjct: 417 VGAASRLFSNMEDKNVVSWNTMIMAHGLHGQPEEALHLFQEF---KGNGILPDEATYIGV 473
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC+HGGLV +GR +FK M Y IEP+ EHY C++DLLG+ G +EA EV + M +
Sbjct: 474 LSACSHGGLVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGA 533
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
DE WG+LLN C+++G + + A KL +DP++ G ++++ IY KW +V+ +R
Sbjct: 534 DEAGWGALLNACRMHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRT 593
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+++DR K PGCS IEVD + H+F D +H +E+IY AL
Sbjct: 594 VMRDRRVKKNPGCSSIEVDGKCHEFLVADVSHVHSEDIYAAL 635
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 185/580 (31%), Positives = 308/580 (53%), Gaps = 78/580 (13%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL-KLSNLTYARFIFDHL 72
++ L L +C ++N +KQL + + + A KL+ +L + +NL A +F+ +
Sbjct: 20 EERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL--AVRVFNQV 77
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
PN +L ++I A+A Q + AF ++ +M R G N F YP +LK+C
Sbjct: 78 QEPNVHLCNSLIRAHA-QNSQPYQAFFVFSEMQRFGLFADN-FTYPFLLKACSGQSWLPV 135
Query: 133 TKMVHTQ----------------------------------------------------I 140
KM+H +
Sbjct: 136 VKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGL 195
Query: 141 VKSG--------FEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
VK+G F++ P + +++ Y+R ++ A +LF++M +RN VSW+ M+
Sbjct: 196 VKAGELRDARRLFDEMPQRDLISWNTMLDGYARC-REMSKAFELFEKMPERNTVSWSTMV 254
Query: 189 SGYTRVGDIKNAASLFDSMP--DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
GY++ GD++ A +FD MP ++V W +IAG + GL +A +M V+ +
Sbjct: 255 MGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQM---VASGL 311
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
+ + ++ L+A +G+L LG IH + R+ L ++++ NAL+DMY KCG+LK+A
Sbjct: 312 KFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFD 371
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F+ KK L SWN+M++ +HG + +I +F M R IRPD VTFI++L +C H
Sbjct: 372 VFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRR---EGIRPDKVTFIAVLCSCNH 428
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GL+++G YF M K Y + PQ+EHYGCLVDLLGR GR +EA++VV+ M +EP+ V+WG
Sbjct: 429 AGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWG 488
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+LL C+++ D A+ + L+++DP + G +L+NIY W+ V +R +K
Sbjct: 489 ALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMG 548
Query: 487 AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K G S +E++ +H+F DK+HP++++IY L S++
Sbjct: 549 VEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLI 588
>gi|449452160|ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cucumis sativus]
Length = 532
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 178/518 (34%), Positives = 295/518 (56%), Gaps = 15/518 (2%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT-LKLSNLTYARFIFDH 71
+++ L +L +C ++N LKQ + + G +NF +L+ FC + +L++A +F H
Sbjct: 5 SKRCLLLLHKCINMNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQH 64
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ P ++ MI A + +A +++ + R G P+ + P+VLK+ +
Sbjct: 65 IQHPTICIFNTMIKALLLR-GEFLNAIAVFSAIFRNG-IHPDTYTLPYVLKASARMTNIH 122
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
+ +H +K G V +L+ Y RS +++ AR++FDEM + + VSWT MI GY
Sbjct: 123 LGESIHACTIKLGSAVNEFVGNSLLVMY-RSFDNMRSARQVFDEMPELSAVSWTVMIYGY 181
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
+GD+ A LFD +D W ++I+G QN F + + FR M + + P++
Sbjct: 182 ANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQL---TEVEPDEA 238
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
+V LSA H G L G IH Y+ R GL L +S LIDMY KCG L A+ F+
Sbjct: 239 IIVTILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEM 298
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
S++ WN+MI+ A+ G E +I +F EM + I+PD +TFI++L AC++ G+V+
Sbjct: 299 SQRDNVCWNAMISGMAMDGDGEGAIKLFMEM---EKAGIKPDNITFIAVLAACSNSGMVD 355
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM--KIEPDE--VVWGS 427
+G + M+ ++IEP+ EHYGC++DLL R GRFEEA V++ + P E V W +
Sbjct: 356 EGIRIWNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRA 415
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
L+ C +G+T AE A ++L +++ ++G Y ++L+N+Y LGK ++ ++VR M+K +
Sbjct: 416 FLSACCKHGQTQQAEVAAERLFQLERHSGAY-VLLSNMYAALGKHEDAKRVRNMMKLKGV 474
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PGCS I+V+ V++F + +KTH + I+ LE +
Sbjct: 475 EKVPGCSSIKVNGVVNEFIAGEKTHRHIDNIHLVLEEL 512
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 162/465 (34%), Positives = 278/465 (59%), Gaps = 10/465 (2%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
+L +R FD + N + +MI YA Q A +L+ +M R+G ++F +
Sbjct: 95 SLGDSRRFFDEMAGRNVVSWNSMIGGYA-QAGDTREACALFGEMRRQGF-LGDEFTLASL 152
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
L +C ++VH ++ SG ++ ALV+ YS+ G D+ +AR+ F+ M ++
Sbjct: 153 LLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCG-DLCMARRCFEMMPIKS 211
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
VVSWT+M+ T+ G + A FD MP+R+ +WN++I+ Q G + +A+ +++M
Sbjct: 212 VVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALDLYKQMQ- 270
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
S P++ TLV LSA G G L +GK++H Y+ N + D + N+L+DMY KCG
Sbjct: 271 --SHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIHNPDISLINSLLDMYAKCGQ 328
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+ A R F + + SWN +I A+HG++ ++I F M+R N PDG+TF++L
Sbjct: 329 VDTAIRLFREMCNRNVVSWNVIIGGLAMHGRALDAITFFRSMVR----NTSPDGITFVAL 384
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L++C+HGGL+E G+ YF+ M Y ++ ++EHY C+VDLLGR G E+A+ ++K M ++P
Sbjct: 385 LSSCSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKP 444
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
D VVWG+LL C+I+G + +K+L+E++ +GG ++++N+ E +W++++++RK
Sbjct: 445 DVVVWGALLGACRIHGNVKIGKQVIKQLLELEGISGGLFVLISNLLYETNQWEDMKRLRK 504
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
++K+R K G S IE++ +H+F D H + EIY ++ +
Sbjct: 505 LMKERGTRKDMGVSSIEINNSIHEFGVEDIRHESSSEIYAVVDQL 549
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 176/399 (44%), Gaps = 67/399 (16%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + P+ +Y + AY + A L+R M+RRG PN+F P V+K+C
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDC-PREALRLHRCMLRRG-VLPNEFTLPFVVKACTRA 58
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
VH +K GF V AL++SY+ +G+ +G +R+ FDEM+ RNVVSW +M
Sbjct: 59 QAWDNALAVHGVALKLGFVGQVFVANALLHSYASAGS-LGDSRRFFDEMAGRNVVSWNSM 117
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I GY + GD + A +LF M RR G
Sbjct: 118 IGGYAQAGDTREACALFGEM----------------------------RRQG------FL 143
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
++ TL L A G L+ G+++H + +G +D + AL+DMY KCG L ARR
Sbjct: 144 GDEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRC 203
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEE-----------MMRC----------- 345
F+ K + SW SM+ + HG + + C F+ M+ C
Sbjct: 204 FEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEAL 263
Query: 346 ------QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
Q H PD T + +L+AC G + G+ L + P I L+D+
Sbjct: 264 DLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGK-MVHLYIRDNIHNPDISLINSLLDM 322
Query: 400 LGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
+ G+ + A+ + + M + V W ++ G ++GR
Sbjct: 323 YAKCGQVDTAIRLFREM-CNRNVVSWNVIIGGLAMHGRA 360
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 121/281 (43%), Gaps = 11/281 (3%)
Query: 203 LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGH 262
+FD + D D +N++ + +A+ R M + + PN+ TL + A
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCM---LRRGVLPNEFTLPFVVKACTR 57
Query: 263 TGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSM 322
+HG + G F++NAL+ Y GSL ++RR FD + + + SWNSM
Sbjct: 58 AQAWDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSM 117
Query: 323 INSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK 382
I +A G + + +F EM R D T SLL AC+ G +E GR LM
Sbjct: 118 IGGYAQAGDTREACALFGEMRR---QGFLGDEFTLASLLLACSQEGNLEFGRLVHCLMLV 174
Query: 383 TYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAE 442
+ I G LVD+ + G A + M I+ V W S+L +G D A
Sbjct: 175 SGSPVDLILG-GALVDMYSKCGDLCMARRCFEMMPIK-SVVSWTSMLCAQTKHGSVDAAR 232
Query: 443 FAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+ E N + M++ Y + G++ E + K ++
Sbjct: 233 CWFDHMPE--RNTVSWNTMIS-CYVQRGQYHEALDLYKQMQ 270
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 165/465 (35%), Positives = 257/465 (55%), Gaps = 48/465 (10%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + + AMI YA Q + A L+ DM R+ PN+ VL +C
Sbjct: 214 ARQLFDEMPVKDVVSWNAMIAGYA-QMGRSKEALLLFEDM-RKANVPPNESTIVSVLSAC 271
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS- 183
N + + + + DR + S
Sbjct: 272 A------------------------------------QSNALDLGNSMRSWIEDRGLCSN 295
Query: 184 ---WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
A+I Y++ GD++ A LFD M +RDV +WN +I G T + +A++ FR M
Sbjct: 296 LKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREM-- 353
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
++ + P ++T + L + H G + LGK IH Y+ +N + + +S +LID+Y KCG+
Sbjct: 354 -LASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGN 412
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+ AR+ FD K L SWN+MI A+HGQ++ + +F +M I P+ +TF+ +
Sbjct: 413 IVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKM---SSDGIEPNEITFVGI 469
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC H GLV+ G+ +F M + Y+I P+ +HYGC++DLLGRAG FEEA +++ M+++P
Sbjct: 470 LSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKP 529
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
D +WGSLL C+ +GR + E ++L E++P+N G ++L+NIY GKWD+V ++R
Sbjct: 530 DGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRT 589
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
L DR K PGC+ IEVD VH+F DK HP++E+IY LE +
Sbjct: 590 RLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEV 634
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/517 (28%), Positives = 249/517 (48%), Gaps = 53/517 (10%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHLTTP 75
L +L +C I KQ+ + + G T F KL+ F + S +++YA +F+ + P
Sbjct: 33 LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
N +++ +MI S + A + M+ G +PN + +P +LKSC + + K
Sbjct: 93 NLFIWNSMIRGL-SMSLSPALALVFFVRMIYSGV-EPNSYTFPFLLKSCAKLASAHEGKQ 150
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+H ++K GF + T+L+N Y++SG ++ A+ +FD+ + R+ +S+TA+I+GY G
Sbjct: 151 IHAHVLKLGFVSDVFIHTSLINMYAQSG-EMNNAQLVFDQSNFRDAISFTALIAGYALWG 209
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
+ A LFD MP +DV +WN++IAG Q G +A+ F M N+ PN+ T+V
Sbjct: 210 YMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMR---KANVPPNESTIVS 266
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
LSA + L LG + ++ GL + + NALIDMY KCG L+ AR FD ++
Sbjct: 267 VLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERD 326
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
+ SWN MI + + ++ +F EM+ + P +TF+S+L +C H G ++ G+
Sbjct: 327 VISWNVMIGGYTHMCSYKEALALFREMLAS---GVEPTEITFLSILPSCAHLGAIDLGKW 383
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK------------------ 417
+ K + L+DL + G A +V GMK
Sbjct: 384 IHAYINKNFNSVSTSLSTS-LIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHG 442
Query: 418 ----------------IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE---IDPNNGGY 458
IEP+E+ + +L+ CK G D + +++ I P + Y
Sbjct: 443 QADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHY 502
Query: 459 GIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
G M+ ++ G G ++E + + ++ K G W
Sbjct: 503 GCMI-DLLGRAGLFEEAESLLQNME----VKPDGAIW 534
>gi|293332303|ref|NP_001170755.1| uncharacterized protein LOC100384848 [Zea mays]
gi|238007354|gb|ACR34712.1| unknown [Zea mays]
Length = 464
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 172/465 (36%), Positives = 269/465 (57%), Gaps = 15/465 (3%)
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP-----HVLKSCPD 126
+ P TAM A+A+ A+ A +++RDM+ G N + H S P
Sbjct: 1 MPDPGLVSRTAMARAHAAS-GQAAQALAVFRDMIADGVLPDNVALAVALAACHTTASLPA 59
Query: 127 V---LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
R KMVH IV SG V T L+ Y G ++ ++R+LFD M R+ VS
Sbjct: 60 AGMAAARRPGKMVHAIIVTSGIVPDVFVSTELIRVYGEYG-ELALSRRLFDAMPVRSTVS 118
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
W AM+ Y R ++ +A LF +MP RDV +WN++IAG + G F +A+ R+M S
Sbjct: 119 WNAMVHQYIRHSNVGDAYELFLAMPRRDVVSWNTMIAGYSLVGRFMEALELSRQMISPSS 178
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
+ PN T+ L+A G L+ G +H +V RN ++ D + +LIDMY KCGS+++
Sbjct: 179 CPVYPNGPTMSTVLAACAGAGCLETGIWVHAFVDRNRMNDDGSLDRSLIDMYVKCGSIEK 238
Query: 304 ARRAFDRNSKKR-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
A + F++ + R L SW +MI A+HG++ +++ +F M QD+ I PD VT + +LN
Sbjct: 239 ALQVFEKAPEARDLYSWTTMICGLAMHGRAADALKMFGMM---QDNGIHPDDVTLVGVLN 295
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC H GLV++G +F + K Y I P+IEHYGC++DLLGR GR +EA +++ M+++P+
Sbjct: 296 ACAHCGLVDEGLRHFYSLEK-YAITPKIEHYGCVIDLLGRVGRLQEAYNIIRTMRMKPNA 354
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
V+WG+ LN CK++ + E A +L +DP + +ML+++Y +L W+ + + R+ +
Sbjct: 355 VIWGAFLNACKVHSNVELGEIAAAELTRLDPGDPWAKVMLSSLYAKLQDWNSLARERREM 414
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+ KTPGCS IE+D +VH+F + HP+ EI LE++ A
Sbjct: 415 NNLQIKKTPGCSSIELDGEVHEFVAGGFQHPQHGEICTVLENVEA 459
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 167/464 (35%), Positives = 267/464 (57%), Gaps = 39/464 (8%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR FD + +PN + TAM + Y S +L+R ++ G V S
Sbjct: 144 ARKAFDEIPSPNPVIITAMASGYVRNNLVYPS-LALFRKLIASGSATAVDEAAALVAFSA 202
Query: 125 PDVLESRG-TKMVHTQIVKSGFEQYPVVETALVNSYSRSGN-DIGIARKLFDEMSDRNVV 182
+ G T +H +VK+G + V ++++Y++ G D+G ARK+F
Sbjct: 203 SARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVF--------- 253
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
D+M ++DV +WNS+IA QNG+ +DA+ +R+M + V
Sbjct: 254 ----------------------DTM-EKDVVSWNSMIALYAQNGMSADALGLYRKM-LNV 289
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
S +I+ N VTL L A H G +Q GK IH V R GL+ + ++ +++DMY KCG ++
Sbjct: 290 SGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVE 349
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
AR+AF + +K + SW++MI + +HG + ++ +F EM R + P+ +TFIS+L
Sbjct: 350 MARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQN---PNYITFISVLA 406
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H GL+++GR ++ M K + IEP +EHYGC+VDLLGRAG +EA ++K MK++PD
Sbjct: 407 ACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDA 466
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
+WG+LL+ C+I+ + AE + K+L E+D N GY ++L+NIY E G W +V ++R ++
Sbjct: 467 AIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLV 526
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K R K PG S +E+ + H F+ DK+HP+ +EIY L ++
Sbjct: 527 KTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLL 570
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 148/339 (43%), Gaps = 42/339 (12%)
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
S +A++ Y +A FD +P + ++ +G +N L +++ FR++
Sbjct: 127 SASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALFRKLIASG 186
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG--S 300
S LV A SA + +H V + GLD D+ + N ++D Y K G
Sbjct: 187 SATAVDEAAALV-AFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGGRRD 245
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
L AR+ FD +K + SWNSMI +A +G S +++ ++ +M+ +I+ + VT ++
Sbjct: 246 LGAARKVFD-TMEKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSG-SIKCNAVTLSAI 303
Query: 361 LNACTHGGLVEQGR-------------------AYFKLMTKTYRI-----------EPQI 390
L AC H G ++ G+ + + +K R+ E I
Sbjct: 304 LLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNI 363
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGM---KIEPDEVVWGSLLNGCKIYGRTDFAEF---A 444
+ ++ G G +EAL++ M P+ + + S+L C G D + A
Sbjct: 364 LSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNA 423
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+KK I+P YG M+ ++ G G DE + K +K
Sbjct: 424 MKKRFGIEPGVEHYGCMV-DLLGRAGCLDEAYGLIKEMK 461
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 13/180 (7%)
Query: 18 AILERCNH---INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
AIL C H I K + + + +G + + +V + K + AR F +
Sbjct: 302 AILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYS-KCGRVEMARKAFQKIKE 360
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV-LESRGT 133
N ++AMIT Y H A ++ +M R GQ PN + VL +C L +G
Sbjct: 361 KNILSWSAMITGYGMH-GHGQEALDIFNEMCRSGQ-NPNYITFISVLAACSHAGLLDKGR 418
Query: 134 KMVHTQIVKSGFEQYPVVE--TALVNSYSRSGNDIGIARKLFDEMSDR-NVVSWTAMISG 190
+ + G E P VE +V+ R+G + A L EM + + W A++S
Sbjct: 419 YWYNAMKKRFGIE--PGVEHYGCMVDLLGRAGC-LDEAYGLIKEMKVKPDAAIWGALLSA 475
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 296/523 (56%), Gaps = 51/523 (9%)
Query: 16 VLAILERC---------NHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN---LT 63
+L ++E+C + I L+Q+ +F G S ++ K + F + L + ++
Sbjct: 11 LLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMS 70
Query: 64 YARFIFDHLTTP-NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
YA +F + P N +++ +I YA + ++ SAFSLYR+M G +P+ YP ++K
Sbjct: 71 YAHKVFSKIEKPINVFIWNTLIRGYA-EIGNSISAFSLYREMRVSGLVEPDTHTYPFLIK 129
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
+ + + R + +H+ +++SGF V+ +L++ Y+ G
Sbjct: 130 AVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG------------------- 170
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
D+ +A +FD MP++D+ AWNSVI G +NG +A++ + M
Sbjct: 171 -------------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMN--- 214
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
S I+P+ T+V LSA G L LGK +H Y+ + GL + SN L+D+Y +CG ++
Sbjct: 215 SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVE 274
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
EA+ FD K SW S+I A++G + +I +F+ M + + P +TF+ +L
Sbjct: 275 EAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE--GLLPCEITFVGILY 332
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H G+V++G YF+ M + Y+IEP+IEH+GC+VDLL RAG+ ++A E +K M ++P+
Sbjct: 333 ACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 392
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
V+W +LL C ++G +D AEFA ++++++PN+ G ++L+N+Y +W +V+K+RK +
Sbjct: 393 VIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQM 452
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PG S +EV +VH+F DK+HP+++ IY L+ M
Sbjct: 453 LRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 495
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 160/424 (37%), Positives = 254/424 (59%), Gaps = 9/424 (2%)
Query: 104 MVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSG 163
M+R G P+ + +P VLK+C + + +H+ +K G V+ AL++++S G
Sbjct: 1 MLRNGT-LPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCG 59
Query: 164 NDIGIARKLFDEMSD--RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAG 221
+ AR +FD + R+VVSW +MISGY + + A +FD +P R+ W S+IAG
Sbjct: 60 A-VEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAG 118
Query: 222 CTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL 281
Q+ LF +AI FR M + + T+ C LSA GH G L G+ IH Y RN +
Sbjct: 119 YAQSDLFKEAIELFREMQI---GGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSI 175
Query: 282 DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEE 341
++D NALI MY KCG +++A F ++ + SW+++I+ A++G+S+ ++ +F +
Sbjct: 176 EMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQ 235
Query: 342 MMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG 401
M D IRP+ +TF+ +L AC HGG V++G YF MT+ Y + P IEHYGC+VDLLG
Sbjct: 236 MEMISD--IRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLG 293
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIM 461
RA EA + ++ + I+PD V+W SLL C+ +G + AEFA K++ E++P G ++
Sbjct: 294 RANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVL 353
Query: 462 LANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDA 521
L+N+Y +W +V++VRK + + K PGCS++E+D VH+ D++HP IY+
Sbjct: 354 LSNVYASASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMGAIYET 413
Query: 522 LESM 525
+ S+
Sbjct: 414 MISI 417
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 110/274 (40%), Gaps = 50/274 (18%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + NT +T+MI YA Q A L+R+M + G + VL +C
Sbjct: 100 VFDRIPHRNTVCWTSMIAGYA-QSDLFKEAIELFREM-QIGGFAADAATIACVLSACGHW 157
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
+ +H ++ E AL+ YS+ G DI A ++F ++ ++ SW+A+
Sbjct: 158 GALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCG-DIQKALEIFHGLTQPDIFSWSAV 216
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
ISG G+ A LF ME+ +IR
Sbjct: 217 ISGLAMNGESDKALHLFSQ---------------------------------MEMISDIR 243
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL----DLDSFISN--ALIDMYGKCGSL 301
PN++T + L A H G V G Y N + +L I + ++D+ G+ L
Sbjct: 244 PNEITFLGVLCACNHGGF-----VDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLL 298
Query: 302 KEARRAFDRN--SKKRLTSWNSMINSFALHGQSE 333
EA + F R + + W S++ + HG E
Sbjct: 299 VEAEK-FIRTLPIQPDVVIWRSLLFACRNHGNIE 331
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 166/463 (35%), Positives = 262/463 (56%), Gaps = 13/463 (2%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR F+ + ++ AMI+ Y Q + AF L+R MV + P P++F + +L +C
Sbjct: 249 ARSAFEEIDGEFDVVWNAMISGYV-QSGMCAEAFELFRRMVSKRIP-PDEFTFTSLLSAC 306
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
+ K VH Q ++ + P V ALV YS+SG I +A K+FD M+ ++
Sbjct: 307 ANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGK-IAVATKIFDSMTLKD 365
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
VVSW ++SGY G + NAA +F MP + +W +++G GL DA+ F +M
Sbjct: 366 VVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMR- 424
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
S++++P T A++A G G L+ GK +H ++ + G + + NAL+ MY +CG+
Sbjct: 425 --SEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGA 482
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+K+AR F SWN+MI++ HG ++ +F++M+ I PD ++F+++
Sbjct: 483 VKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVA---QGIYPDRISFLTI 539
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L AC H GLV+ G YF+ M + + I P +HY L+DLLGRAGR EA +++K M EP
Sbjct: 540 LTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEP 599
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
+W ++L+GC+I G + +A +L ++ P + G I+L+N Y G+W + +VRK
Sbjct: 600 TPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRK 659
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
+++DR K PGCSWIEV +VH F D HP E+Y LE
Sbjct: 660 LMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLE 702
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 218/484 (45%), Gaps = 86/484 (17%)
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP-QPNQFIYPHVLKSCP---DVLESR 131
+T L+ AMI+A+A + + A+ A S++R ++ +P+ + + +L + D+ S
Sbjct: 121 DTVLHNAMISAFA-RASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSH 179
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGI---ARKLFDEMSDRNVVSWTAMI 188
T++ H + K G V AL+ Y + + G+ ARK+ DEM +++ ++WT ++
Sbjct: 180 CTQL-HCAVHKLGAGAVLSVSNALIALYMKC-DAPGVTRDARKVLDEMPEKDELTWTTIV 237
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
G+ R GD+ A S F+ + WN++I+G Q+G+ ++A FRRM VS I P
Sbjct: 238 VGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRM---VSKRIPP 294
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS----FISNALIDMYGKCGSLKEA 304
++ T LSA + G GK +HG R D ++NAL+ +Y K G + A
Sbjct: 295 DEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVA 354
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM---------------------- 342
+ FD + K + SWN++++ + G +N+ +F+EM
Sbjct: 355 TKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAE 414
Query: 343 --------MRCQDHNIRPDGVTFISLLNACTHGGLVEQGR----------------AYFK 378
MR +D ++P T+ + AC G ++ G+ A
Sbjct: 415 DALKLFNQMRSED--VKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNA 472
Query: 379 LMTKTYR------------IEPQIE--HYGCLVDLLGRAGRFEEALEVVKGM---KIEPD 421
L+T R + P ++ + ++ LG+ G EALE+ M I PD
Sbjct: 473 LLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPD 532
Query: 422 EVVWGSLLNGCKIYGRTD--FAEF-AVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
+ + ++L C G D F F ++++ I P Y L ++ G G+ E R +
Sbjct: 533 RISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYA-RLIDLLGRAGRIGEARDL 591
Query: 479 RKML 482
K +
Sbjct: 592 IKTM 595
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 158/342 (46%), Gaps = 46/342 (13%)
Query: 131 RGTKMVHTQIVKSGF---EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
R + +H +++ + +P + L++ Y+ S D+ LF +D V+ T++
Sbjct: 39 RTLRCLHARLLTAALLHDPSHPHLTLRLLHLYTLS-PDLATPAVLF--RADPGPVAATSL 95
Query: 188 ISGYTRVGDIKNAASLFDSMP--DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
+S Y G ++++A+ FDS+P RD N++I+ + L + A+S FR + + D+
Sbjct: 96 VSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSL-LASDDS 154
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKV--IHGYVYRNGLDLDSFISNALIDMYGKC---GS 300
+RP+ + LSA+G L + +H V++ G +SNALI +Y KC G
Sbjct: 155 LRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGV 214
Query: 301 LKEARRAFDRNSKKRLTSWNSMI-------------NSFA-------------LHGQSEN 334
++AR+ D +K +W +++ ++F + G ++
Sbjct: 215 TRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQS 274
Query: 335 SIC--VFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY---FKLMTKTYRIEPQ 389
+C FE R I PD TF SLL+AC + G G++ F + + E
Sbjct: 275 GMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAA 334
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ LV L ++G+ A ++ M ++ D V W ++L+G
Sbjct: 335 LPVNNALVTLYSKSGKIAVATKIFDSMTLK-DVVSWNTILSG 375
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 189/571 (33%), Positives = 283/571 (49%), Gaps = 78/571 (13%)
Query: 24 NHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAM 83
N N LK + + L L Q N Y L+ C L + Y++ +F + PN +L+ M
Sbjct: 27 NFFNQLKHIHARLLRLHLDQDN-YLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTM 85
Query: 84 ITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKS 143
I S+ A LY M R G PN F P VLK+C L+ R +H+ +VK+
Sbjct: 86 IRGLVSKDCF-DDAIHLYGSM-RGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKA 143
Query: 144 GFEQYPVVE-------------------------------TALVNSYSRSGN---DIGIA 169
G++ V+ TA++ Y SG+ IG
Sbjct: 144 GYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAF 203
Query: 170 RKLF-----------------------------------DEMSDRNVVSWTAMISGYTRV 194
+KL D RNV T+++ Y +
Sbjct: 204 KKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKC 263
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G+++ A +F +MP++D+ +W+++I G NGL A+ F +M S+N++P+ T+V
Sbjct: 264 GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQ---SENLKPDCYTMV 320
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
LSA G L LG + RN + + ALIDMY KCGS+ +A F +K
Sbjct: 321 GVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRK 380
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
WN+M+ +++G ++ VF + H IRPD TFI LL CTHGG V +GR
Sbjct: 381 DRVVWNAMMVGLSMNGHAK---AVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGR 437
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
+F M + + + P IEHYGC+VDLLGRAG EA +++ M ++P+ VVWG+LL GCK+
Sbjct: 438 QFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKL 497
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+ T AE +KKLIE++P N G + L+NIY +W+E K+R +K++ K CS
Sbjct: 498 HKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACS 557
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
WIE+D VH+F DK+H +E+IY L+ +
Sbjct: 558 WIEIDGIVHEFLVGDKSHWLSEKIYAKLDEL 588
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 109/257 (42%), Gaps = 10/257 (3%)
Query: 15 QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
+VLA R + + +++ G + F A L+ +K NL A IF +
Sbjct: 220 KVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDM-YVKCGNLERANLIFSAMPE 278
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
+ ++ MI YA A L+ M + +P+ + VL +C +
Sbjct: 279 KDIVSWSTMIQGYAFN-GLPQQALDLFFQM-QSENLKPDCYTMVGVLSACATLGALDLGI 336
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+ + ++ F PV+ TAL++ YS+ G+ + A ++F M ++ V W AM+ G +
Sbjct: 337 WASSLMDRNEFLSNPVLGTALIDMYSKCGS-VTQAWEIFTAMKRKDRVVWNAMMVGLSMN 395
Query: 195 GDIKNAASLFDSMPDRDV-PAWNSVIA---GCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
G K SLF + + P N+ I GCT G ++ FF M S + P+
Sbjct: 396 GHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFS--LTPSI 453
Query: 251 VTLVCALSAIGHTGMLQ 267
C + +G G+L
Sbjct: 454 EHYGCMVDLLGRAGLLN 470
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 159/434 (36%), Positives = 259/434 (59%), Gaps = 23/434 (5%)
Query: 111 QPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIAR 170
+P+ +VL +C + K VH V+SG + V ALV+ Y++ G + A
Sbjct: 10 RPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGM-VDEAS 68
Query: 171 KLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRD----VPAWNSVIAGCTQNG 226
K+FD + +++VVSW AM++GY+++G ++A LF+ M + + V +W++VIA Q G
Sbjct: 69 KVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRG 128
Query: 227 LFSDAISFFRRMGMEVSDN--------------IRPNQVTLVCALSAIGHTGMLQLGKVI 272
L + + FR M +++ ++PN T+ CAL A L+LG+ I
Sbjct: 129 LGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQI 188
Query: 273 HGYVYRNGLDLD-SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
H Y+ RN D +++N LIDMY K G + AR FD +K SW S++ + +HG+
Sbjct: 189 HAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGR 248
Query: 332 SENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE 391
+ ++ VF+EM R ++PDGVT + +L AC+H G+++QG +F M+K + + P E
Sbjct: 249 GKEALEVFDEMRRV---GLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQE 305
Query: 392 HYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
HY C+VDLLGRAGR EA+E+++GM++EP +VW +LL+GC+I+ + E A K+L+E+
Sbjct: 306 HYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLEL 365
Query: 452 DPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKT 511
+ N G +L+NIY +W +V +VR ++K+ K PGCSW++ K F+ DKT
Sbjct: 366 NSENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKT 425
Query: 512 HPRTEEIYDALESM 525
HP++++IY+ L S+
Sbjct: 426 HPQSKQIYEILRSL 439
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 50/242 (20%)
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
++RP+ V+LV L A G GK +HG R+G D F+ NAL+DMY KCG + EA
Sbjct: 8 DMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEA 67
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM---------------------- 342
+ FDR +K + SWN+M+N ++ G+ E+++ +FE+M
Sbjct: 68 SKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQR 127
Query: 343 ---------------------------MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
M QD ++P+ T L AC + GR
Sbjct: 128 GLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQ 187
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
+ + + + CL+D+ ++G + A V +K + + V W SL+ G ++
Sbjct: 188 IHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLK-QKNFVSWTSLMTGYGMH 246
Query: 436 GR 437
GR
Sbjct: 247 GR 248
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 76 NTYLYTAMITAYAS--------------QPAHASSAFSLYRDMVRR-GQPQPNQFIYPHV 120
N ++A+I A+A Q A+ A L+ M ++ G +PN F
Sbjct: 113 NVVSWSAVIAAFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCA 172
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQ-YPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
L +C + R + +H I+++ F+ + V L++ Y++SG DI +AR +FD + +
Sbjct: 173 LIACARLAALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSG-DIDVARFVFDNLKQK 231
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMP----DRDVPAWNSVIAGCTQNGLFSDAISFF 235
N VSWT++++GY G K A +FD M D V+ C+ +G+ I FF
Sbjct: 232 NFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFF 291
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGML 266
M E + P Q C + +G G L
Sbjct: 292 NSMSKEF--GVIPGQEHYACMVDLLGRAGRL 320
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 342 MMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG 401
M + D ++RPD V+ +++L AC G G+A + ++ E LVD+
Sbjct: 1 MCKLGDIDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVG-NALVDMYA 59
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE 450
+ G +EA +V +K E D V W +++NG GR + A +K+ E
Sbjct: 60 KCGMVDEASKVFDRIK-EKDVVSWNAMVNGYSQIGRFEDALGLFEKMRE 107
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 176/554 (31%), Positives = 296/554 (53%), Gaps = 50/554 (9%)
Query: 13 NQQVLAILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
N+ + + ++ C ++ LK Q+ + G +F LV +K + + A +F
Sbjct: 114 NRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHM-YIKCNQIRDAHRVF 172
Query: 70 DHLTTPNTYLYTAMITAYASQPA-------------------------------HA---S 95
D + P+ ++A++ AYA Q H+ S
Sbjct: 173 DRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYS 232
Query: 96 SAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETAL 155
A ++ DM RG +P+ VL + D+ + ++H ++K G V +AL
Sbjct: 233 EAVLMFLDMHLRGF-EPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSAL 291
Query: 156 VNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR----D 211
++ Y + ++ ++FD+M +V S A I G +R G ++++ LF + D+ +
Sbjct: 292 IDMYGKCSCTSEMS-QVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELN 350
Query: 212 VPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKV 271
V +W S+IA C+QNG +A+ FR M + ++PN VT+ C L A G+ L GK
Sbjct: 351 VVSWTSMIACCSQNGRDMEALELFREMQIA---GVKPNSVTIPCLLPACGNIAALMHGKA 407
Query: 272 IHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
H + R G+ D ++ +ALIDMY KCG ++ +R FD K L WN++I +A+HG+
Sbjct: 408 AHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGK 467
Query: 332 SENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE 391
++ ++ +F+ M R +PD ++F +L+AC+ GL E+G YF M+ Y IE ++E
Sbjct: 468 AKEAMEIFDLMQRSGQ---KPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVE 524
Query: 392 HYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
HY C+V LL RAG+ E+A +++ M + PD VWG+LL+ C+++ E A +KL E+
Sbjct: 525 HYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFEL 584
Query: 452 DPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKT 511
+P+N G I+L+NIY G W+EV +VR M+K++ K PGCSWIEV +VH + DK+
Sbjct: 585 EPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKS 644
Query: 512 HPRTEEIYDALESM 525
HP+ +I + L+ +
Sbjct: 645 HPQMTQIIENLDKL 658
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 223/480 (46%), Gaps = 59/480 (12%)
Query: 11 TLNQQVLAILERCNH--INHLKQLQSFLTTLGQSQTNFYA---FKLVRFCTLKLS----N 61
+L+ Q LA+L+ H +N L + L+ Q+ + F T LS N
Sbjct: 2 SLSAQALALLDSVQHTILNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANN 61
Query: 62 LTYA--RFIFDHLTTPNTYLYTAMITAYAS--QPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+ +A + D + PN + ++ +I A++ Q HA S FS M+ RG P+ +
Sbjct: 62 MCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFS---QMLTRGL-MPDNRVL 117
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
P +K+C + + + VH SGF+ V+++LV+ Y + N I A ++FD M
Sbjct: 118 PSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKC-NQIRDAHRVFDRMF 176
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVP----AWNSVIAGCTQNGLFSDAIS 233
+ +VVSW+A+++ Y R G + A LF M D V +WN +IAG +GL+S+A+
Sbjct: 177 EPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVL 236
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
F M + P+ T+ L A+G L +G +IHGYV + GL D +S+ALID
Sbjct: 237 MFLDMHLR---GFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALID 293
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEE------------ 341
MYGKC E + FD+ + S N+ I + +GQ E+S+ +F +
Sbjct: 294 MYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVS 353
Query: 342 ---MMRCQDHN-----------------IRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
M+ C N ++P+ VT LL AC + + G+A
Sbjct: 354 WTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSL 413
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+ I + L+D+ + GR + + G+ + + V W +++ G ++G+ A
Sbjct: 414 RR-GISTDVYVGSALIDMYAKCGRIQASRICFDGIPTK-NLVCWNAVIAGYAMHGKAKEA 471
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 175/528 (33%), Positives = 281/528 (53%), Gaps = 59/528 (11%)
Query: 1 MVSVTNQLNQTLNQ-QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL 59
+ + T+QL+ N Q L +L+RC+++ L+Q+ + G A KL+ FC
Sbjct: 5 LCTPTSQLSSESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPN 64
Query: 60 S-NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
S +L YAR +FD + PNT+++ MI Y S A LY M+ P N + +P
Sbjct: 65 SGSLAYARTVFDRIFRPNTFMWNTMIRGY-SNSKEPEEALLLYHHMLYHSVPH-NAYTFP 122
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
+LK+C + T+ +H I+K GF +L+N YS+SG
Sbjct: 123 FLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSG--------------- 167
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
DIK+A LFD + RD ++A++ F RM
Sbjct: 168 -----------------DIKSARLLFDQVDQRD-----------------TEALNLFHRM 193
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
+ I+ + V LV L A G+L GK IH Y+ ++ +++D + LIDMY KC
Sbjct: 194 Q---TAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKC 250
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G L+EA F + +K ++ W +MI+ +A+HG+ ++ E M+ Q + P+ +TF
Sbjct: 251 GDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREAL---EWFMKMQTAGVEPNQMTFT 307
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
+L AC+H GLV + + F+ M + + +P IEHYGC+VDLLGRAG +EA E+++ M +
Sbjct: 308 GILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPV 367
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
+P+ +WG+LLN C I+G + + K LI++DP +GG I LA+I+ G+W++ +V
Sbjct: 368 KPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARV 427
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
R+ +K++ K PGCS I V+ H+F + D++HP+ +EI LE +V
Sbjct: 428 RRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIV 475
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 182/578 (31%), Positives = 298/578 (51%), Gaps = 83/578 (14%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
++++ H LKQ+ + L LG + F KL+ + ++T+AR +FD L P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH-ASSSFGDITFARQVFDDLPRPQI 84
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+ + A+I Y S+ H A +Y +M + + P+ F +PH+LK+C + + + VH
Sbjct: 85 FPWNAIIRGY-SRNNHFQDALLMYSNM-QLARVSPDSFTFPHLLKACSGLSHLQMGRFVH 142
Query: 138 TQIVKSGF---------------------------EQYPVVE------TALVNSYSRSGN 164
Q+ + GF E P+ E TA+V++Y+++G
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202
Query: 165 DIGIARKLFDEMSDRNV-VSWTAMIS---------------------------------- 189
+ A ++F M +V W A++S
Sbjct: 203 PME-ALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 190 ----GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
Y + G + A LFD M ++ WN++I+G +NG +AI F M ++ +
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM---INKD 318
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
+RP+ +++ A+SA G L+ + ++ YV R+ D FIS+ALIDM+ KCGS++ AR
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
FDR + + W++MI + LHG++ +I ++ M R H P+ VTF+ LL AC
Sbjct: 379 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVH---PNDVTFLGLLMACN 435
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
H G+V +G +F LM ++I PQ +HY C++DLLGRAG ++A EV+K M ++P VW
Sbjct: 436 HSGMVREGWWFFNLMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVW 494
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
G+LL+ CK + + E+A ++L IDP+N G+ + L+N+Y WD V +VR +K++
Sbjct: 495 GALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEK 554
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K GCSW+EV ++ F DK+HPR EEI +E
Sbjct: 555 GLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVE 592
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 186/583 (31%), Positives = 302/583 (51%), Gaps = 88/583 (15%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
+ Q + ++ ++HL++L + L G A KL+ L L +R +F
Sbjct: 23 VEQHLASLPHGLPRLHHLQELHAQLLKHGLHLDPVAASKLLSSYALH-RRLPASRGVFAS 81
Query: 72 LTTPN--TYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
P+ T+L ++ AYA + P A + FS P + F Y ++K+
Sbjct: 82 FPNPHATTFLPNTLLRAYALNALPREAVAVFS--------AMPHRDSFTYSFLIKA---- 129
Query: 128 LESRGT---KMVHTQIVKSGFEQYPVVETALVNSYSRSGN-------------------- 164
L S G + VH+ +VK G + V AL+++YS++G
Sbjct: 130 LSSAGVAPLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDVVSWN 189
Query: 165 ----------DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA 214
++ AR++FDEM +++ VSW ++ GYT+ GD++ A LF MP+R+V +
Sbjct: 190 SAMAAMVRQGEVEGARRMFDEMLEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERNVVS 249
Query: 215 WNSVIAG-------------------------------CTQNGLFSDAISFFRRMGMEVS 243
W++V++G C QNGL +A F +M
Sbjct: 250 WSTVVSGYCKKGDMEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMK---E 306
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
++ + +V L+A +G L LGK IH YV L + + NALIDM+ KCG +
Sbjct: 307 ASVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCINR 366
Query: 304 ARRAFDRN-SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
A FD +K SWN++I FA+HG + ++ F +M + PD VT I++L+
Sbjct: 367 ADYVFDTEIVEKDSVSWNTIIGGFAMHGHGDKALDFFAQM---KLQGFCPDAVTMINVLS 423
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
ACTH G VE+GR YF M + Y + PQIEHYGC++DLLGR G +EA++++K M +P+E
Sbjct: 424 ACTHMGFVEEGRRYFANMERDYGVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNE 483
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
V+WGSLL+ C+++ ++AE AV +L ++ P+N G +L++IY E GKW ++ K R +
Sbjct: 484 VIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSSIYAEAGKWSDMAKARMQM 543
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K + K+ G SWIE+D+ H+F D+ HP +++I + ++ +
Sbjct: 544 KGTGSQKSSGSSWIELDEAFHEFTVGDRKHPDSDQISEMVDRL 586
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 281/524 (53%), Gaps = 50/524 (9%)
Query: 13 NQQVLAILERCNHINHLKQLQSFL--TTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFD 70
+Q++ ++ E C+ ++ LKQL +F TT + + + + + S++ YA +FD
Sbjct: 105 HQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 164
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ +++++ +I A A + AF LYR M+ RG+ P++ +P VLK+C +
Sbjct: 165 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 224
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
K VH QIVK GF V L++ Y G + +ARK+FDE
Sbjct: 225 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC-LDLARKVFDE--------------- 268
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
MP+R + +WNS+I + G + A+ FR E+ + P+
Sbjct: 269 ----------------MPERSLVSWNSMIDALVRFGEYDSALQLFR----EMQRSFEPDG 308
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRN---GLDLDSFISNALIDMYGKCGSLKEARRA 307
T+ LSA G L LG H ++ R + +D + N+LI+MY KCGSL+ A +
Sbjct: 309 YTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQV 368
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F K+ L SWN+MI FA HG++E ++ F+ M+ + N+RP+ VTF+ LL AC H
Sbjct: 369 FQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD-KRENVRPNSVTFVGLLIACNHR 427
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
G V +GR YF +M + Y IEP +EHYGC+VDL+ RAG EA+++V M ++PD V+W S
Sbjct: 428 GFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRS 487
Query: 428 LLNGCKIYGRT-DFAEFAVKKLIEIDPNN-------GGYGIMLANIYGELGKWDEVRKVR 479
LL+ C G + + +E + +I +N G ++L+ +Y +W++V VR
Sbjct: 488 LLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVR 547
Query: 480 KMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K++ + K PGCS IE++ H+F + D +HP+T++IY L+
Sbjct: 548 KLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLK 591
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 171/508 (33%), Positives = 279/508 (54%), Gaps = 14/508 (2%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMIT 85
+ H + LG Q F A L+ F +L +R F + N + MI
Sbjct: 130 VEHALAAHGVVVKLGFVQQIFVANALLHF-HASAGSLRDSRRFFGEMADRNVVSWNTMIG 188
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
YA Q S A +L+ +M +G + F +L +C ++VH ++ SG
Sbjct: 189 GYA-QAGEVSEACALFGEMRHQGL-LADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGS 246
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
++ AL++ Y + G D+ +A + FD M +NVV+WT+M+ + G + F+
Sbjct: 247 RVDRILGNALLDMYGKCG-DLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFE 305
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
MP+R++ +WN++I+ Q G + + + RM S I P++ TL LSA G G
Sbjct: 306 QMPERNIVSWNAMISCYVQCGRLHETLDLYNRMR---SLGITPDEFTLAGVLSACGQNGD 362
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L GK+IH YV N D + N+L+DMY +CG + A F K + SWN +I +
Sbjct: 363 LASGKMIHCYVRDNFNDPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVIIGA 422
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
A+HG+++ ++ F M+ PD +TF+ LL+AC+HGGL+E G YF+ M + Y
Sbjct: 423 LAMHGRAQETVTFFRTMV---SDAFSPDEITFVGLLSACSHGGLLEAGEYYFEAMARVYN 479
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
+EP++EHYGC+VDLLGR G +A+ ++K M I+PD VVWG+LL C+I+G + + +
Sbjct: 480 VEPEVEHYGCMVDLLGRRGHLAKAVNLIKDMSIKPDVVVWGALLGACRIHGNVEIGKLVI 539
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
K+L+E++ GG +++ N++ E +W++++K+RK++K++ K G S IEV +H+F
Sbjct: 540 KQLLELEGITGGLFVLICNLFYETNQWEDMKKLRKLMKEQGTKKDMGVSSIEVKNIIHEF 599
Query: 506 HSLDKTHPRTEEIYDALES----MVALH 529
D H T EIY A++ +V+LH
Sbjct: 600 GVEDLRHESTNEIYAAVDQLSYHLVSLH 627
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 143/542 (26%), Positives = 234/542 (43%), Gaps = 112/542 (20%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLV-RFCTLKLSN----LTYARF 67
++ VL +L +C I HL Q+ + L G S + A +L+ +CTL + L +AR
Sbjct: 10 SRHVLELLRQCRSIQHLDQIHAHLVVHGFSDVSSVASQLIASYCTLSAGDRDGGLCHARR 69
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + P+ ++Y ++ AY++ A L+R +++RG PN+F P VLK+C V
Sbjct: 70 LFDRIPEPDRFMYNTLVRAYSNSDC-PQEALRLHRGVLQRG-ILPNEFTLPFVLKACTTV 127
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
H +VK GF Q V AL++ ++ +G+ + +R+ F EM+DRNVVSW M
Sbjct: 128 RAVEHALAAHGVVVKLGFVQQIFVANALLHFHASAGS-LRDSRRFFGEMADRNVVSWNTM 186
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I GY + G++ A +LF M GL +D
Sbjct: 187 IGGYAQAGEVSEACALFGEM---------------RHQGLLADVF--------------- 216
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
TLV L A G L++G+++H ++ +G +D + NAL+DMYGKCG L A R
Sbjct: 217 ----TLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNALLDMYGKCGDLWMAHRC 272
Query: 308 FDRNSKKRLTSWNSMINSFALHGQ-----------SENSICVFEEMMRC----------- 345
FD K + +W SM+ + A HG E +I + M+ C
Sbjct: 273 FDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETL 332
Query: 346 ------QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
+ I PD T +L+AC G + G+ + + +P + L+D+
Sbjct: 333 DLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDNFN-DPGVTLLNSLLDM 391
Query: 400 LGRAGRFEEALEVVKGM----------------------------------KIEPDEVVW 425
R G+ + A+ + M PDE+ +
Sbjct: 392 YARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGRAQETVTFFRTMVSDAFSPDEITF 451
Query: 426 GSLLNGCKIYGRTDFAEF---AVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
LL+ C G + E+ A+ ++ ++P YG M+ LG+ + K ++
Sbjct: 452 VGLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEHYGCMV----DLLGRRGHLAKAVNLI 507
Query: 483 KD 484
KD
Sbjct: 508 KD 509
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 173/475 (36%), Positives = 277/475 (58%), Gaps = 19/475 (4%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFI 116
NL AR +FD + Y MI YA +QP SA L+ +M G P++F
Sbjct: 159 FGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQP---ESALCLFGEMQNSG-ILPDEFT 214
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKS--GFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
+ + C + E K +H Q+ K+ + ++++A+V+ Y++ G I IA ++F
Sbjct: 215 FVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGL-INIAERVFS 273
Query: 175 EM-SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
M + ++ +W++M+ GY R G+I A LF+ M +RDV +W ++I+G +Q G S+A+
Sbjct: 274 TMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALE 333
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK-VIHGYVYRNGLDLDSFISNALI 292
F+ M + I+P++VTLV LSA G LGK + H Y+ + ++ ++ A++
Sbjct: 334 LFKEME---ALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVM 390
Query: 293 DMYGKCGSLKEARRAFDRNSKKRLTSW--NSMINSFALHGQSENSICVFEEMMRCQDHNI 350
DMY KCGS+ A F R K T + NSMI A HG E +I VF E++ +
Sbjct: 391 DMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELI---STGL 447
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
+PD VTF+ +L AC H GL+E+G+ F+ M Y I+PQ+EHYGC+VDLLGR G EEA
Sbjct: 448 KPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAY 507
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELG 470
++V+ M E + V+W +LL+ C+ +G E A +KL+E++ +G ++L+NI +
Sbjct: 508 DLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADAN 567
Query: 471 KWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+W+E R+VRK+++D K PG S+IE+ +H+F + DK+HP+ +EI L+ M
Sbjct: 568 QWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDM 622
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 201/474 (42%), Gaps = 76/474 (16%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN--LTYARFIFD 70
N L +LE C Q+ + G F +L+ F +L S L ++R +F
Sbjct: 9 NPSSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFS 68
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ PN +++ MI Y S+ + A LY M+ +G PN F +P +L SC +
Sbjct: 69 QIDCPNLFMWNTMIRGY-SRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSL 127
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
VH+ I+K GFE V AL++ YS GN + +AR LFDE R++VS+ MI G
Sbjct: 128 EPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGN-LNLARTLFDESLVRDLVSYNTMIKG 186
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y V ++A LF M + I P++
Sbjct: 187 YAEVNQPESALCLFGEMQN----------------------------------SGILPDE 212
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS--FISNALIDMYGK----------- 297
T V S +GK IH VY+N +DS + +A++DMY K
Sbjct: 213 FTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVF 272
Query: 298 ---------------------CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSI 336
CG + AR+ F+ ++ + SW +MI+ ++ GQ ++
Sbjct: 273 STMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEAL 332
Query: 337 CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCL 396
+F+EM + I+PD VT +++L+AC G + G+ + + +
Sbjct: 333 ELFKEM---EALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAV 389
Query: 397 VDLLGRAGRFEEALEVVKGM-KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
+D+ + G + ALE+ + + K V+ S++ G +G + A ++LI
Sbjct: 390 MDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELI 443
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 164/454 (36%), Positives = 261/454 (57%), Gaps = 11/454 (2%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F+++ + + A+I Y +Q A + M+ +P++F VL +C ++
Sbjct: 251 MFENMEERSIVSWNAIIAGY-NQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANL 309
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE--MSDRNVVSWT 185
+ K +H+ I+++G + AL+++Y++SG+ + AR++ D+ ++D NV+S+T
Sbjct: 310 RMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGS-VETARRIMDKAVVADLNVISFT 368
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
A++ GY ++GD K A +FD M +RDV AW ++I G QNG +A+ FR M +
Sbjct: 369 ALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSM---IRSG 425
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
PN TL LSA L GK IH R+ + +SNA+I +Y + GS+ AR
Sbjct: 426 PEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLAR 485
Query: 306 RAFDRNS-KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R FD+ +K +W SMI + A HG E +I +FEEM+R ++PD VT+I + +AC
Sbjct: 486 RVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRV---GVKPDRVTYIGVFSAC 542
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
TH G +++G+ Y++ M + I P++ HY C+VDLL RAG EA E ++ M + PD VV
Sbjct: 543 THAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVV 602
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WGSLL C++ D AE A +KL+ IDP+N G LAN+Y G+W++ ++ K+ KD
Sbjct: 603 WGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKD 662
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
+ K G SW V +VH F + D HP+ + I
Sbjct: 663 KAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAI 696
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 200/428 (46%), Gaps = 44/428 (10%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L AR +F + + +T M+ ++ A + DMV G P+QF+
Sbjct: 109 KSGRLADARVVFAQMPERDAVSWTVMVVGL-NRAGRFWDAVKTFLDMVGEGLA-PSQFML 166
Query: 118 PHVLKSCPDVLESRGT-KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+VL SC E+RG + VH+ ++K G V +++ Y + G D AR +F+ M
Sbjct: 167 TNVLSSCA-ATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCG-DAETARAVFERM 224
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
R+ SW AM+S YT G + A S+F++M +R + +WN++IAG QNGL A+ FF
Sbjct: 225 KVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFS 284
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
R M + ++ P++ T+ LSA + ML++GK +H Y+ R G+ S I NALI Y
Sbjct: 285 R--MLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYA 342
Query: 297 KCGSL---------------------------------KEARRAFDRNSKKRLTSWNSMI 323
K GS+ K+AR FD + + + +W +MI
Sbjct: 343 KSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMI 402
Query: 324 NSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT 383
+ +GQ++ ++ +F M+R P+ T ++L+AC + G+ ++
Sbjct: 403 VGYEQNGQNDEAMELFRSMIR---SGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRS 459
Query: 384 YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEF 443
+ E + ++ + R+G A V + + V W S++ +G + A
Sbjct: 460 LQ-EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIV 518
Query: 444 AVKKLIEI 451
++++ +
Sbjct: 519 LFEEMLRV 526
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 142/277 (51%), Gaps = 15/277 (5%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGI---ARKLF 173
+ +L+ + + +H VK+G + L++ Y+R+G G AR+LF
Sbjct: 28 FARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLF 87
Query: 174 DEM--SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
D++ + RN +W +++S Y + G + +A +F MP+RD +W ++ G + G F DA
Sbjct: 88 DDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDA 147
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
+ F M V + + P+Q L LS+ T +G+ +H +V + GL ++N++
Sbjct: 148 VKTFLDM---VGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSV 204
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIR 351
+ MYGKCG + AR F+R + +SWN+M++ + G+ + ++ +FE M ++ +I
Sbjct: 205 LYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENM---EERSI- 260
Query: 352 PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
V++ +++ GL + +F M +EP
Sbjct: 261 ---VSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEP 294
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 117/255 (45%), Gaps = 17/255 (6%)
Query: 45 NFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM 104
N +F + +KL + AR +FD + + +TAMI Y Q A L+R M
Sbjct: 363 NVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGY-EQNGQNDEAMELFRSM 421
Query: 105 VRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN 164
+R G P+PN VL +C + K +H + ++S EQ V A++ Y+RSG+
Sbjct: 422 IRSG-PEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGS 480
Query: 165 DIGIARKLFDEMSDRN-VVSWTAMISGYTRVGDIKNAASLFDSM------PDRDVPAWNS 217
+ +AR++FD++ R V+WT+MI + G + A LF+ M PDR +
Sbjct: 481 -VPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDR--VTYIG 537
Query: 218 VIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVY 277
V + CT G ++ +M E I P C + + G+L H ++
Sbjct: 538 VFSACTHAGFIDKGKRYYEQMLNE--HGIVPEMSHYACMVDLLARAGLLTEA---HEFIQ 592
Query: 278 RNGLDLDSFISNALI 292
R + D+ + +L+
Sbjct: 593 RMPVAPDTVVWGSLL 607
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/519 (34%), Positives = 283/519 (54%), Gaps = 26/519 (5%)
Query: 18 AILERCNHI---NHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
+I + C I + KQ+ + + LG F L+ + L AR +FD +
Sbjct: 133 SIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYA-QNGELVNARLVFDKSSM 191
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
+ +TA+IT YAS+ A L+ ++ R N I + + + +
Sbjct: 192 RDAVSFTALITGYASK-GFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEE 250
Query: 135 MVHTQIVKSGFEQYPVVETAL--VNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG-- 190
M ++ P V T L +++ ++SG+ + + + + DR + S +++G
Sbjct: 251 MRRAKVT-------PNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLI 303
Query: 191 --YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
Y + GD++ A++LF+ + D++V +WN +I G T + +A+ FRRM + NI P
Sbjct: 304 DMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRM---MQSNIDP 360
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS--NALIDMYGKCGSLKEARR 306
N VT + L A + G L LGK +H YV +N + + ++ +LIDMY KCG L A+R
Sbjct: 361 NDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKR 420
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
FD + K L +WN+MI+ FA+HG ++ ++ +F M PD +TF+ +L AC H
Sbjct: 421 IFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRM---TSEGFVPDDITFVGVLTACKH 477
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GL+ GR YF M + Y++ P++ HYGC++DL GRAG F+EA +VK M+++PD +W
Sbjct: 478 AGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWC 537
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
SLL C+I+ R + AE K L E++P N ++L+NIY G+W++V K+R L D
Sbjct: 538 SLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNR 597
Query: 487 AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PGCS IEVD VH+F DK HP++ EIY L+ +
Sbjct: 598 MKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEI 636
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/428 (31%), Positives = 226/428 (52%), Gaps = 13/428 (3%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL-SNLTYARFIFDHLTTP 75
L +L C + LKQ+ S + G T+F KL+ FC + +L+YA +F + P
Sbjct: 32 LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNP 91
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
N ++ MI +S + A Y M+ G +PN++ +P + KSC + + K
Sbjct: 92 NHVIWNHMIRGLSSSES-PFLALEYYVHMISSGT-EPNEYTFPSIFKSCTKIRGAHEGKQ 149
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
VH ++K G E V T+L+N Y+++G + AR +FD+ S R+ VS+TA+I+GY G
Sbjct: 150 VHAHVLKLGLEHNAFVHTSLINMYAQNGELVN-ARLVFDKSSMRDAVSFTALITGYASKG 208
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
+ A LFD +P RDV +WN++I+G Q+G +A++FF M + PN T++
Sbjct: 209 FLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRA---KVTPNVSTMLS 265
Query: 256 ALSAIGHTG-MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
LSA +G LQLG + ++ GL + + N LIDMY KCG L+EA F++ K
Sbjct: 266 VLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDK 325
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ SWN MI + + ++ +F MM+ NI P+ VTF+S+L AC + G ++ G+
Sbjct: 326 NVVSWNVMIGGYTHMSCYKEALGLFRRMMQS---NIDPNDVTFLSILPACANLGALDLGK 382
Query: 375 AYFKLMTKTYR-IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
+ K + ++ + + L+D+ + G A + M + W ++++G
Sbjct: 383 WVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTK-SLATWNAMISGFA 441
Query: 434 IYGRTDFA 441
++G TD A
Sbjct: 442 MHGHTDTA 449
>gi|413944078|gb|AFW76727.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 794
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 165/462 (35%), Positives = 263/462 (56%), Gaps = 9/462 (1%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L AR +FD + + +T +I YA + A+ ++ MV PN+
Sbjct: 182 LPDARKLFDEMADRDVVSWTTLIDGYA-RGGLPDEAWRVFCRMVVAESVWPNEVTLVAAA 240
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+ + + VH IV+SG +E ALV+ + + G + A+++FD M ++V
Sbjct: 241 SAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGC-VAAAKEVFDGMPIKDV 299
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
SWT+M+S Y + GD++NAA LF +P+R+V +W+ ++A + + +AI F M
Sbjct: 300 YSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDM--- 356
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG-YVYRNGLDLDSFISNALIDMYGKCGS 300
++ + P TLV LSA L +G ++ Y+ + ++L +SNA IDM+ KCG
Sbjct: 357 IAAGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGD 416
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+ A R F K + SWN+MI + LHGQ E ++ +F+E + + I PD T+I +
Sbjct: 417 VGAASRLFSNMEDKNVVSWNTMIMAHGLHGQPEEALHLFQEF---KGNGILPDEATYIGV 473
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC+HGGLV +GR +FK M Y IEP+ EHY C++DLLG+ G +EA EV + M +
Sbjct: 474 LSACSHGGLVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGA 533
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
DE WG+LLN C+++G + + A KL +DP++ G ++++ IY KW +V+ +R
Sbjct: 534 DEAGWGALLNACRMHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRT 593
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+++DR K PGCS IEVD + H+F D +H +E+IY AL
Sbjct: 594 VMRDRRVKKNPGCSSIEVDGKCHEFLVADVSHVHSEDIYAAL 635
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 164/465 (35%), Positives = 262/465 (56%), Gaps = 9/465 (1%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L AR +FD LT N +T++I A Q A L+ M R +QF
Sbjct: 293 KCGRLESARQVFDGLTEHNAVSWTSLIGGVA-QAGFQEEALVLFNQM-REVPVASDQFTL 350
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
VL C + + +H + G + V ALV Y++ G D+ A F+ M
Sbjct: 351 ATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCG-DVWKANHAFELMP 409
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
R+++SWTAMI+ +++ GD++ A FD MP+R+V +WNS++A Q G + + + + +
Sbjct: 410 IRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQ 469
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M + + ++ + +T ++SA +L LG I + G + ++N+++ MY +
Sbjct: 470 M---LREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSR 526
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG ++EA++ F K L SWN+M+ +A +GQ I +FE+M+ + PD +++
Sbjct: 527 CGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGN---VPDQISY 583
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+S+L+ C+H G V +G+ YF MTK + I P EH+ C+VDLLGRAG+ E+A ++ M
Sbjct: 584 VSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMP 643
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+P+ +WG+LL C+I+G T AE AVK L+E+D G +LANIY E GK V
Sbjct: 644 FKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTN 703
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
VRK+++D+ K PGCSWIEVD +VH F D HP+ ++++ L
Sbjct: 704 VRKLMRDKGVRKNPGCSWIEVDNRVHVFTVDDTNHPQIKDVHRML 748
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 164/361 (45%), Gaps = 60/361 (16%)
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
+K C + + +H Q++ G + ++ L+N YS G I A ++F + N
Sbjct: 11 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCG-LISDAYRVFGGIMFPN 69
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
V SW MISG+ G ++ A LF+ MP+RD +WNS+++G NG
Sbjct: 70 VYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNG-------------- 115
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
L + A G G L+L +HG+ + +D+ + +++DMY KCG+
Sbjct: 116 -----------ELEATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGA 164
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM------------------ 342
+ A++ F R L WNSMI ++ +G + ++ +F +M
Sbjct: 165 MDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQH 224
Query: 343 ----------MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEH 392
+ + RP+ +T+ S+L+ACT +E G L + R+EP ++
Sbjct: 225 GFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGA---HLHARIVRMEPCLDV 281
Query: 393 Y-GC-LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE 450
Y GC L+D+ + GR E A +V G+ E + V W SL+ G G + A ++ E
Sbjct: 282 YAGCGLIDMYAKCGRLESARQVFDGLT-EHNAVSWTSLIGGVAQAGFQEEALVLFNQMRE 340
Query: 451 I 451
+
Sbjct: 341 V 341
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 191/426 (44%), Gaps = 22/426 (5%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI--YPH------ 119
+F + PN Y + MI+ +A A L+ M R N + Y H
Sbjct: 61 VFGGIMFPNVYSWNTMISGFADS-GQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEA 119
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
+K+ + + +H K F VET++++ Y + G + A+K+F +
Sbjct: 120 TIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCG-AMDFAQKVFCRTPNP 178
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
++ W +MI GY++ G +K A LF MP+RD +WN++I+ +Q+G ++ ++ F M
Sbjct: 179 SLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMW 238
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
+ RPN +T LSA L+ G +H + R LD + LIDMY KCG
Sbjct: 239 ---NQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCG 295
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
L+ AR+ FD ++ SW S+I A G E ++ +F +M ++ + D T +
Sbjct: 296 RLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQM---REVPVASDQFTLAT 352
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
+L C + G T T ++ + LV + + G +A + M I
Sbjct: 353 VLGVCLSQKDISIGEQ-LHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIR 411
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVR 479
D + W +++ G + A K+ E N + MLA Y + G W+E KV
Sbjct: 412 -DIISWTAMITAFSQAGDVEKAREYFDKMPE--RNVISWNSMLAT-YMQRGYWEEGLKVY 467
Query: 480 -KMLKD 484
+ML++
Sbjct: 468 IQMLRE 473
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 281/524 (53%), Gaps = 50/524 (9%)
Query: 13 NQQVLAILERCNHINHLKQLQSFL--TTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFD 70
+Q++ ++ E C+ ++ LKQL +F TT + + + + + S++ YA +FD
Sbjct: 48 HQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 107
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ +++++ +I A A + AF LYR M+ RG+ P++ +P VLK+C +
Sbjct: 108 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 167
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
K VH QIVK GF V L++ Y G + +ARK+FDE
Sbjct: 168 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC-LDLARKVFDE--------------- 211
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
MP+R + +WNS+I + G + A+ FR E+ + P+
Sbjct: 212 ----------------MPERSLVSWNSMIDALVRFGEYDSALQLFR----EMQRSFEPDG 251
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRN---GLDLDSFISNALIDMYGKCGSLKEARRA 307
T+ LSA G L LG H ++ R + +D + N+LI+MY KCGSL+ A +
Sbjct: 252 YTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQV 311
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F K+ L SWN+MI FA HG++E ++ F+ M+ + N+RP+ VTF+ LL AC H
Sbjct: 312 FQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD-KRENVRPNSVTFVGLLIACNHR 370
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
G V +GR YF +M + Y IEP +EHYGC+VDL+ RAG EA+++V M ++PD V+W S
Sbjct: 371 GFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRS 430
Query: 428 LLNGCKIYGRT-DFAEFAVKKLIEIDPNN-------GGYGIMLANIYGELGKWDEVRKVR 479
LL+ C G + + +E + +I +N G ++L+ +Y +W++V VR
Sbjct: 431 LLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVR 490
Query: 480 KMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K++ + K PGCS IE++ H+F + D +HP+T++IY L+
Sbjct: 491 KLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLK 534
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/506 (34%), Positives = 274/506 (54%), Gaps = 49/506 (9%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
KQ+ G F A L+ + K L AR +FD + N +T+MI+ Y
Sbjct: 106 KQIHQQAFVFGYGSDIFVASALIDMYS-KCGYLNDARKLFDEIPERNVVSWTSMISGYV- 163
Query: 90 QPAHASSAFSLYR----------DMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
Q A A L++ D + + + V+ +C V T+ VH
Sbjct: 164 QNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGL 223
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
VK GFE V L+++Y++ G +I ++RK+
Sbjct: 224 AVKKGFEGCLAVGNTLMDAYAKCG-EISVSRKV--------------------------- 255
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
FD M + DV +WNS+IA QNGL +A S F M +R N VTL L A
Sbjct: 256 ----FDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKR--GEVRYNAVTLSAVLLA 309
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSW 319
H+G LQ+GK IH V + L+ + + +++DMY KCG ++ AR+AFDR +K + SW
Sbjct: 310 CAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSW 369
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
M+ + +HG + ++ VF EM+RC I+P+ +TF+S+L AC+H GL+++G +F
Sbjct: 370 TVMVAGYGMHGHGKEAMKVFYEMIRC---GIKPNYITFVSVLAACSHAGLLKEGWHWFNK 426
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
M + +EP IEHY C+VDLLGRAG +EA +++ MK++PD +VWGSLL C+I+ +
Sbjct: 427 MKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVE 486
Query: 440 FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVD 499
E + +KL ++DP+N GY ++L+NIY + G+WD+V ++R ++K+ KTPG S +E
Sbjct: 487 LGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHK 546
Query: 500 KQVHQFHSLDKTHPRTEEIYDALESM 525
+VH F DK HP+ E+IY+ L+ +
Sbjct: 547 GRVHVFLVGDKEHPQHEKIYEYLDEL 572
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 178/396 (44%), Gaps = 52/396 (13%)
Query: 71 HLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
++ + Y + ++I +A A AFS R + PN+ +P +KSC +
Sbjct: 45 YVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKL----SLHPNRSTFPCTIKSCSSLY 100
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ K +H Q G+ G+DI +A +A+I
Sbjct: 101 DLCAGKQIHQQAFVFGY-----------------GSDIFVA---------------SALI 128
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR-MGMEVSD--- 244
Y++ G + +A LFD +P+R+V +W S+I+G QN +A+ F+ + ++ +D
Sbjct: 129 DMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDE 188
Query: 245 ----NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ + V L C +SA + + + +HG + G + + N L+D Y KCG
Sbjct: 189 IVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGE 248
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+ +R+ FD + + SWNS+I +A +G S + +F +M++ +R + VT ++
Sbjct: 249 ISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVK--RGEVRYNAVTLSAV 306
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L AC H G ++ G+ + K +E + +VD+ + GR E A + +K
Sbjct: 307 LLACAHSGALQIGKCIHDQVVKM-ELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLK-RK 364
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPN 454
+ W ++ G ++G A ++I I PN
Sbjct: 365 NVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPN 400
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 14/240 (5%)
Query: 199 NAASLFDSMPDR-DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
N S+F D+ V +WNS+IA ++G A+ F M ++ PN+ T C +
Sbjct: 37 NLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMR---KLSLHPNRSTFPCTI 93
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
+ L GK IH + G D F+++ALIDMY KCG L +AR+ FD ++ +
Sbjct: 94 KSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVV 153
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHN--------IRPDGVTFISLLNACTHGGL 369
SW SMI+ + + ++ ++ +F+E + + + + D V +++AC +
Sbjct: 154 SWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCV 213
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
L K E + L+D + G + +V GM+ E D W SL+
Sbjct: 214 KSVTECVHGLAVKK-GFEGCLAVGNTLMDAYAKCGEISVSRKVFDGME-ETDVCSWNSLI 271
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/511 (33%), Positives = 278/511 (54%), Gaps = 41/511 (8%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHLTT 74
++A ++RC + LK +Q+ + +Q F KL+ + LS ++ YA IF
Sbjct: 10 LVAAIKRCTRVGDLKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHH 69
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
PN +++ +I Y+ + +A +LYRDM G PN + + VLK+C +L +
Sbjct: 70 PNLFMWNTIIRGYSISDS-PITAIALYRDMFLCG-ISPNSYTFGFVLKACCKLLRLCEGQ 127
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H+QIVK G + ET LVN +I Y
Sbjct: 128 ELHSQIVKVGLD----FETPLVN----------------------------GLIKLYAAC 155
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + A +FD MP+ D +W+++++G QNG +A+ FR M E N+ + TL
Sbjct: 156 GCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAE---NVSSDAFTLA 212
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
+ G G L LGK +H Y+ + G+ +D + AL+ MY KCGSL A + F +++
Sbjct: 213 SVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAER 272
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+T+W++MI +A+HG E ++ +F+ M R + P+ VTF S+L+AC+H GLVE+G
Sbjct: 273 DVTAWSTMIAGYAIHGHGEKALQLFDAMKRSK---TIPNCVTFTSVLSACSHSGLVEKGH 329
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
F+ M Y+I PQI+HYGC+VDL RAG A + ++ M IEP+ V+W +LL CK
Sbjct: 330 QIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKT 389
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+G D E +K++++DP++ ++++N+Y LG+W V +VR ++KD+ K G S
Sbjct: 390 HGYKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWS 449
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
IE++ VH+F D++HP E+IY L M
Sbjct: 450 SIEINFMVHKFIMGDESHPEREKIYGMLHQM 480
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 281/524 (53%), Gaps = 50/524 (9%)
Query: 13 NQQVLAILERCNHINHLKQLQSFL--TTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFD 70
+Q++ ++ E C+ ++ LKQL +F TT + + + + + S++ YA +FD
Sbjct: 39 HQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 98
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ +++++ +I A A + AF LYR M+ RG+ P++ +P VLK+C +
Sbjct: 99 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 158
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
K VH QIVK GF V L++ Y G + +ARK+FDE
Sbjct: 159 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC-LDLARKVFDE--------------- 202
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
MP+R + +WNS+I + G + A+ FR E+ + P+
Sbjct: 203 ----------------MPERSLVSWNSMIDALVRFGEYDSALQLFR----EMQRSFEPDG 242
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRN---GLDLDSFISNALIDMYGKCGSLKEARRA 307
T+ LSA G L LG H ++ R + +D + N+LI+MY KCGSL+ A +
Sbjct: 243 YTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQV 302
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F K+ L SWN+MI FA HG++E ++ F+ M+ + N+RP+ VTF+ LL AC H
Sbjct: 303 FQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD-KRENVRPNSVTFVGLLIACNHR 361
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
G V +GR YF +M + Y IEP +EHYGC+VDL+ RAG EA+++V M ++PD V+W S
Sbjct: 362 GFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRS 421
Query: 428 LLNGCKIYGRT-DFAEFAVKKLIEIDPNN-------GGYGIMLANIYGELGKWDEVRKVR 479
LL+ C G + + +E + +I +N G ++L+ +Y +W++V VR
Sbjct: 422 LLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVR 481
Query: 480 KMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K++ + K PGCS IE++ H+F + D +HP+T++IY L+
Sbjct: 482 KLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLK 525
>gi|414883628|tpg|DAA59642.1| TPA: hypothetical protein ZEAMMB73_113196, partial [Zea mays]
Length = 635
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 237/388 (61%), Gaps = 8/388 (2%)
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD-RNVVSWTAMISGYTRV 194
VH VK+G V A ++ Y G D+ RK+FDE+ R+VV+W A+++GY R
Sbjct: 154 VHALAVKAGAAGDLYVRNAQIHFYGVCG-DVAAMRKVFDELPIVRDVVTWNAVLAGYVRA 212
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + A +FD MP RD +W++VI G + G A+ F+ M V+ ++ N+ +V
Sbjct: 213 GMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNM---VAQGVKANEAAIV 269
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
ALSA G+L+ GK +H V R G+ + + ALIDMY KCGS+ A+ FD ++
Sbjct: 270 TALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRR 329
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ +WNSMI A HG +++ +FE+ + P +TF+ +LNAC+ GLV++GR
Sbjct: 330 DVFAWNSMICGLATHGLGHDAVQLFEKFV---SEGFCPTSITFVGVLNACSRTGLVDEGR 386
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
YFKLM + Y IE ++EHYGC+VDLL RAG +EA+E+++GM+I PD V+WG++L+ CK
Sbjct: 387 RYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKR 446
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+G D KLIE+DP + GY ++LA+IY + KWDEVRKVRK++ +R K+ G S
Sbjct: 447 HGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKSAGWS 506
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+E VH+F D H + IY+ L
Sbjct: 507 LMEAHGIVHKFLVGDMNHKDSARIYNML 534
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 139/358 (38%), Gaps = 87/358 (24%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + ++ +I Y + A ++++MV +G + N+ L +
Sbjct: 218 AREVFDGMPVRDEVSWSTVIGGYVKE-GEPEVALGVFKNMVAQGV-KANEAAIVTALSAA 275
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ K VH + + G + AL++ YS+ G+ + A+++FD M R+V +W
Sbjct: 276 AQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGS-VAAAKEVFDAMPRRDVFAW 334
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+MI G +GL DA+ F + VS+
Sbjct: 335 NSMICGL-------------------------------ATHGLGHDAVQLFEKF---VSE 360
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
P +T V L+A TG++ E
Sbjct: 361 GFCPTSITFVGVLNACSRTGLVD-----------------------------------EG 385
Query: 305 RRAFDRNSKK-----RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
RR F ++K + + M++ + G + ++ + E M I PD V + +
Sbjct: 386 RRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGM------RIPPDPVLWGT 439
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE-HYGCLVDLLGRAGRFEEALEVVKGM 416
+L+AC GLV+ G + K ++P + +Y L + +A +++E +V K M
Sbjct: 440 ILSACKRHGLVDLG---ITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLM 494
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 80/211 (37%), Gaps = 37/211 (17%)
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR-- 315
+A G +G +H + G D ++ NA I YG CG + R+ FD R
Sbjct: 140 AAAGSIASRFMGTHVHALAVKAGAAGDLYVRNAQIHFYGVCGDVAAMRKVFDELPIVRDV 199
Query: 316 ------------------------------LTSWNSMINSFALHGQSENSICVFEEMMRC 345
SW+++I + G+ E ++ VF+ M+
Sbjct: 200 VTWNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVA- 258
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
++ + ++ L+A GL+EQG+ + + K + + L+D+ + G
Sbjct: 259 --QGVKANEAAIVTALSAAAQLGLLEQGK-FVHEVVKRVGMTMSVNLGAALIDMYSKCGS 315
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
A EV M D W S++ G +G
Sbjct: 316 VAAAKEVFDAMP-RRDVFAWNSMICGLATHG 345
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 185/573 (32%), Positives = 292/573 (50%), Gaps = 63/573 (10%)
Query: 12 LNQQVLAILERC-NHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFD 70
L+ +L LE C Q+ + L G Q A + V+ ++ +A +F+
Sbjct: 57 LSHPILRTLESCCGSTKEFNQIHTQLIVSGLLQQPLAAGRAVKTLCSFPDSVQHAVSLFE 116
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
L P+ ++ ++ Y + ++ Y MVR+ PN + +P ++K C ++
Sbjct: 117 GLEEPDAFICNTIMRTYVNVNDPYTALGFYYEQMVRKCV-APNHYTFPLLVKVCWEIGSI 175
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSG--------------------------- 163
+ +H +I+K GFE V +L++ YS G
Sbjct: 176 GDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVTWNSMIDGY 235
Query: 164 ---NDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIA 220
+IG AR+LF+EM +R++ SW +MI+GY GD+ A LF+ MP RD+ +WN +I
Sbjct: 236 VKNGEIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMID 295
Query: 221 GCTQNGLFSDAISFFRRMGME--VSDNIR-------------------------PNQVTL 253
G Q A F M VS NI PN+ TL
Sbjct: 296 GYAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKMMGETMPNEATL 355
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNG-LDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
V L+A H G L GK IH Y+ N ++ D +S AL+ MY KCG++ AR FD+ S
Sbjct: 356 VSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMS 415
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+ + SWNSMI + +HGQ++ ++ +F +M + P+ TFI +L+AC H G++ +
Sbjct: 416 NRSVVSWNSMIMGYGMHGQADKALEMFLDM---EKRGPMPNDATFICVLSACAHSGMILE 472
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G YF LM + Y+IEP++EHYGC+VDLLGRAG ++ E+++ M +E +WG+LL+ C
Sbjct: 473 GWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKMPMEGGTALWGALLSAC 532
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+ + ++ AE K+LIE++P + G ++L+NIY GKWD+V VRKM+K+R KT G
Sbjct: 533 RTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDDVEIVRKMMKERGLTKTTG 592
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
SW+ +++ Q + R +Y L M
Sbjct: 593 FSWVHIEEFGTQSFVEKASVHRKSMMYSILSDM 625
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 177/502 (35%), Positives = 277/502 (55%), Gaps = 46/502 (9%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRF---CTLKLSNLTYARFIFDHLTTPNTYLYTAMITA 86
+QL L G A KLV C L + +AR +FD + N +L+ +I A
Sbjct: 82 RQLHGRLLVSGLGPDTVLATKLVDLYAACGL----VGHARRLFDGMPKRNVFLWNVLIRA 137
Query: 87 YASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFE 146
YA H A LYR MV G +P+ F YP LK+C +L+ + VH +++ + +
Sbjct: 138 YARDGPH-EVAIQLYRGMVDYGV-EPDNFTYPLALKACAALLDLETGREVHERVLGTHW- 194
Query: 147 QYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDS 206
G D+ + L D Y + G + +A ++FD
Sbjct: 195 ----------------GEDMFVCAGLVDM---------------YAKCGCVDDARAVFDR 223
Query: 207 MPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGML 266
+ RD WNS+IA QNG +A+S R M ++ + P TLV +SA L
Sbjct: 224 IRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMA---ANGVGPTIATLVSTISAAADAAAL 280
Query: 267 QLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSF 326
G+ +HG+ +R G D + +L+DMY K G ++ AR F++ K+ L SWN+MI +
Sbjct: 281 PRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGY 340
Query: 327 ALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRI 386
+HG + ++ +F +M + + PD +TF+ +L+AC HGG+V++ + +F LM Y I
Sbjct: 341 GMHGHFDEALKLFNKMR--VEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSI 398
Query: 387 EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
+P ++H+ CLVD+LG AGRFEEA +++KGM ++PD +WG+LLNGCKI+ + E A++
Sbjct: 399 KPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQ 458
Query: 447 KLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFH 506
KLIE++P + G ++L+NIY + GKW++ +VRK++ +R K GCSWIE+ + H F
Sbjct: 459 KLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFL 518
Query: 507 SLDKTHPRTEEIYDALESMVAL 528
D +HPR+ EIY+ LE + L
Sbjct: 519 VGDASHPRSAEIYEELERLEGL 540
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L G+ +HG + +GL D+ ++ L+D+Y CG + ARR FD K+ + WN +I +
Sbjct: 78 LGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRA 137
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
+A G E +I ++ M+ D+ + PD T+ L AC +E GR + + T+
Sbjct: 138 YARDGPHEVAIQLYRGMV---DYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHW 194
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
E G LVD+ + G ++A V +++ D VVW S++ GR
Sbjct: 195 GEDMFVCAG-LVDMYAKCGCVDDARAVFDRIRVR-DSVVWNSMIAAYGQNGR 244
>gi|193806402|sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
Length = 577
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/532 (32%), Positives = 291/532 (54%), Gaps = 44/532 (8%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTY 78
I+++C+ L+ + + +Q + + CT L A + PN +
Sbjct: 34 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACT-SFKRLDLAVSTMTQMQEPNVF 92
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHT 138
+Y A+ + + +H + LY M+R P+ + Y ++K+ SR + +
Sbjct: 93 VYNALFKGFVT-CSHPIRSLELYVRMLR-DSVSPSSYTYSSLVKASS--FASRFGESLQA 148
Query: 139 QIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV---- 194
I K GF + ++T L++ YS +G I ARK+FDEM +R+ ++WT M+S Y RV
Sbjct: 149 HIWKFGFGFHVKIQTTLIDFYSATGR-IREARKVFDEMPERDDIAWTTMVSAYRRVLDMD 207
Query: 195 ---------------------------GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGL 227
G+++ A SLF+ MP +D+ +W ++I G +QN
Sbjct: 208 SANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKR 267
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
+ +AI+ F +M + + I P++VT+ +SA H G+L++GK +H Y +NG LD +I
Sbjct: 268 YREAIAVFYKM---MEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYI 324
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
+AL+DMY KCGSL+ A F KK L WNS+I A HG ++ ++ +F +M +
Sbjct: 325 GSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKM---EM 381
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE 407
+++P+ VTF+S+ ACTH GLV++GR ++ M Y I +EHYG +V L +AG
Sbjct: 382 ESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIY 441
Query: 408 EALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYG 467
EALE++ M+ EP+ V+WG+LL+GC+I+ AE A KL+ ++P N GY +L ++Y
Sbjct: 442 EALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYA 501
Query: 468 ELGKWDEVRKVRKMLKDRNAYKT-PGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
E +W +V ++R +++ K PG S I +DK+ H F + DK+H ++E+
Sbjct: 502 EQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEV 553
>gi|449486568|ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Cucumis sativus]
Length = 532
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 177/518 (34%), Positives = 294/518 (56%), Gaps = 15/518 (2%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT-LKLSNLTYARFIFDH 71
+++ L +L +C ++N LKQ + + G +NF +L+ FC + +L++A +F H
Sbjct: 5 SKRCLLLLHKCINMNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQH 64
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ P ++ MI A + +A +++ + R G P+ + P+VLK+ +
Sbjct: 65 IQHPTICIFNTMIKALLLR-GEFLNAIAVFSAIFRNG-IHPDTYTLPYVLKASARMTNIH 122
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
+ +H +K G V +L+ Y RS +++ AR++FDEM + + VSWT MI GY
Sbjct: 123 LGESIHACTIKLGSAVNEFVGNSLLVMY-RSFDNMRSARQVFDEMPELSAVSWTVMIYGY 181
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
+GD+ A LFD +D W ++I+G QN F + + FR M + + P++
Sbjct: 182 ANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQL---TEVEPDEA 238
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
+V LSA H G L G IH Y+ R GL L +S LIDMY KCG L A+ F+
Sbjct: 239 IIVTILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEM 298
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
S++ WN+MI+ A+ G E +I +F EM + I+PD +TFI++ AC++ G+V+
Sbjct: 299 SQRDNVCWNAMISGMAMDGDGEGAIKLFMEM---EKAGIKPDNITFIAVWXACSNSGMVD 355
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM--KIEPDE--VVWGS 427
+G + M+ ++IEP+ EHYGC++DLL R GRFEEA V++ + P E V W +
Sbjct: 356 EGIRIWNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRA 415
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
L+ C +G+T AE A ++L +++ ++G Y ++L+N+Y LGK ++ ++VR M+K +
Sbjct: 416 FLSACCKHGQTQQAEVAAERLFQLERHSGAY-VLLSNMYAALGKHEDAKRVRNMMKLKGV 474
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PGCS I+V+ V++F + +KTH + I+ LE +
Sbjct: 475 EKVPGCSSIKVNGVVNEFIAGEKTHRHIDNIHLVLEEL 512
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 183/578 (31%), Positives = 298/578 (51%), Gaps = 79/578 (13%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
QTL ++L++L++C L+Q+ + + + NF L RF LK + A +F
Sbjct: 28 QTLTDKLLSLLKQCTSTKSLQQIHTQMIINAIHKPNFL---LHRFIDLK--DFNNASLLF 82
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
+ PN Y + MI + + Y M G +PN F YP V +C ++L
Sbjct: 83 SQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFG-IRPNNFTYPFVFIACANLLV 141
Query: 130 SRGTKMVHTQIVKSGF-------------------------------EQYPVVETALVNS 158
+ H+ ++KSG E+ V ++++
Sbjct: 142 LNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISG 201
Query: 159 YSR---SGNDIGIARKLFD------------------EMSDRNVVSW------------- 184
YSR +G+ +G+ ++ D ++ D + SW
Sbjct: 202 YSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLN 261
Query: 185 ----TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
+A+I Y + GD+ +A +FD M +DV WN++I G QNG+ +AI F GM
Sbjct: 262 SFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFS--GM 319
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
S + P+++TLV LSA G L GK + Y GL D ++S ALIDMY KCGS
Sbjct: 320 RES-GVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGS 378
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
L +A R F+ +K SWN+MI++ A HG+ + S+ +F+ M + + +RP+ ++FI +
Sbjct: 379 LDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSK-EGGAVRPNDISFIGV 437
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC H GLV++GR F LM+ ++ + P+IEH+ C+VDLL RAG EA + ++ M +P
Sbjct: 438 LSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKP 497
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
DEVV G+LL C+ D +E + L+E++P N G I+ + I+ + +WD+ ++R
Sbjct: 498 DEVVLGALLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRV 557
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
+++ R KTPGCSWIE++ QVH+FH+ D H ++++
Sbjct: 558 LMRQRGVTKTPGCSWIEIENQVHEFHAGDVLHFISQDM 595
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/388 (40%), Positives = 238/388 (61%), Gaps = 8/388 (2%)
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD-RNVVSWTAMISGYTRV 194
+H+ +V++G P +LV +Y G+ + AR++FDE + +VVSW MI GY +
Sbjct: 93 LHSLLVRAGHAADPHASASLVQAYCSCGS-VASARRVFDETAAYADVVSWNVMIDGYVKS 151
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
GD+ A LFD MP R+V +W VI Q +AI FRRM +E I P+ V L+
Sbjct: 152 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVE---GIEPDGVALL 208
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
LSA G G++ LG+ +H +V R GL + + NA+IDMY KCGS+K+A F+ +K
Sbjct: 209 SVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQK 268
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ +W +MI FALHG ++ +F M + N+ P+ +TF+++L+ C+H GL + GR
Sbjct: 269 SIVTWTTMIAGFALHGLGSEAVELFRRM---EKENVSPNDITFLAVLSVCSHVGLTDLGR 325
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
YFK M Y+I+P++EHYGC++DLLGRAG EA +++ M + + +WG+LL +
Sbjct: 326 WYFKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAART 385
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+G T+ E A+ LIE++P+N G I+L+NIY E +WD VR++R ++DR PG S
Sbjct: 386 HGDTELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGAS 445
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
I+VD VH+F S D +HP +I + L
Sbjct: 446 SIDVDGMVHEFTSRDGSHPSLHKIREVL 473
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 43/297 (14%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K +L AR +FD + N +T +I AYA Q A ++R M G +P+
Sbjct: 149 VKSGDLARARELFDVMPGRNVVSWTMVIGAYA-QMKQPEEAIEVFRRMQVEGI-EPDGVA 206
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
VL +C D+ + VH +++ G Q + A+++ Y + G+ + A ++F+ M
Sbjct: 207 LLSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGS-VKKALEVFEGM 265
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+++V+WT MI+G+ +GL S+A+ FR
Sbjct: 266 EQKSIVTWTTMIAGF-------------------------------ALHGLGSEAVELFR 294
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV---YRNGLDLDSFISNALID 293
RM E N+ PN +T + LS H G+ LG+ + Y+ ++ + +ID
Sbjct: 295 RMEKE---NVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHY--GCMID 349
Query: 294 MYGKCGSLKEARRAF-DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
+ G+ G L EAR D K W +++ + HG +E ++ + HN
Sbjct: 350 LLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQALLHLIELEPHN 406
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 164/433 (37%), Positives = 251/433 (57%), Gaps = 13/433 (3%)
Query: 97 AFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALV 156
A L+RD++ G +P+ F +L D+ R K +H+ + G + V ALV
Sbjct: 390 ALMLFRDLLMEG-IEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALV 448
Query: 157 NSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP----DRDV 212
Y + NDI A+ FDE+S+R+ +W A+ISGY R I L + M + +V
Sbjct: 449 EMYCKC-NDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNV 507
Query: 213 PAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVI 272
WNS++AG +N + A+ F M +VS ++RP+ T+ L+A + GK +
Sbjct: 508 YTWNSILAGLVENKQYDLAMQLFNEM--QVS-SLRPDIYTVGIILAACSKLATIHRGKQV 564
Query: 273 HGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQS 332
H Y R G D D+ I L+DMY KCGS+K + +++ S L N+M+ ++A+HG
Sbjct: 565 HAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHG 624
Query: 333 ENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEH 392
E I +F M+ D +RPD VTF+S+L++C H G ++ G F LM +TY I P ++H
Sbjct: 625 EEGIVIFRRML---DSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLM-ETYNITPTLKH 680
Query: 393 YGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
Y C+VDLL RAG+ +EA +++K M +E D V W +LL GC I+ E A +KLIE++
Sbjct: 681 YTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIELE 740
Query: 453 PNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTH 512
P+N G ++LAN+Y G+W ++ K R+++ D+ K+PGCSWIE VH F + DK+H
Sbjct: 741 PSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSH 800
Query: 513 PRTEEIYDALESM 525
R EEIY L+++
Sbjct: 801 QRVEEIYFMLDNL 813
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 203/421 (48%), Gaps = 22/421 (5%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTY 78
IL+ N + KQL S G NF KL++ ++ S+ A +FD +T N +
Sbjct: 40 ILQSSNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSIN-SSFEDAWHMFDKMTLKNLH 98
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQP-NQFIYPHVLKSCPDVLESRGTKMVH 137
+TA++ + + F L+ + + G + + F++P VL C + + + VH
Sbjct: 99 SWTAVLRLHLNMGLFYK-GFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVH 157
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
++K GF V AL++ Y + G+ + A+K+ + M+ ++ VSW ++I+ G +
Sbjct: 158 GMVLKHGFVTNVYVGNALIDMYGKCGS-LDEAKKVLEGMTQKDCVSWNSIITACVANGVV 216
Query: 198 KNAASLFDSMP----DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
A L ++M + +V W++VI G + N +++ F RM V + P+ TL
Sbjct: 217 YEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARM---VGAGVAPDARTL 273
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
L A L +GK +HGY+ R+ L + F++NAL+ MY +CG +K A + F + ++
Sbjct: 274 ASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFAR 333
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K S+N+MI + +G + +F +M + + D +++ +++ + +
Sbjct: 334 KCAASYNTMIVGYLENGNVGKAKELFYQM---EQEGVERDRISWNCMISGHVDNFMFDDA 390
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLG-----RAGRFEEALEVVKGMKIEPDEVVWGSL 428
F+ + IEP G ++ R G+ ++ +VKG+ + + V G+L
Sbjct: 391 LMLFRDLLME-GIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGL--QSNSFVGGAL 447
Query: 429 L 429
+
Sbjct: 448 V 448
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 84/208 (40%), Gaps = 36/208 (17%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+LA + I+ KQ+ ++ G LV K ++ + +++ ++ P
Sbjct: 548 ILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYA-KCGSIKHCYQVYNKISNP 606
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
N + AM+TAYA H ++R M+ + +P+ + VL SC
Sbjct: 607 NLVCHNAMLTAYAMH-GHGEEGIVIFRRML-DSRVRPDHVTFLSVLSSC----------- 653
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
VH +K G+E + ++ET + + +T M+ +R G
Sbjct: 654 VHAGSIKIGYECFYLMETYNITP---------------------TLKHYTCMVDLLSRAG 692
Query: 196 DIKNAASLFDSMP-DRDVPAWNSVIAGC 222
+ A L +MP + D W++++ GC
Sbjct: 693 KLDEAYQLIKNMPMEADSVTWSALLGGC 720
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 178/516 (34%), Positives = 279/516 (54%), Gaps = 23/516 (4%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQ--TNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPN 76
+L+ C+ + +K+ LG+ + ++ + + L+ L AR +FD + +
Sbjct: 128 VLKACSRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRD 187
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
+ + +MI Y SA L+ M Q N L S ++
Sbjct: 188 SVSFNSMIDGYVKH-GMVKSARELFDVM---PMEQKN-------LISWNSMISGYARSEE 236
Query: 137 HTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
++ FE+ P + ++++ + G + A LF++M R+VVSW M+ GY
Sbjct: 237 GLRVAWELFEEMPKRDLISWNSMIDGCVKCGK-MENAHHLFNQMPKRDVVSWANMVDGYA 295
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
++G+I A LFD MP+RDV + N+++AG QNG +A++FF M + P+ T
Sbjct: 296 KLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFH--DMLSRKELFPDNAT 353
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
L+ LSAI G G +H Y+ NG L + ALIDMY KCGS+ A F+
Sbjct: 354 LLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDID 413
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
K + WN++I A+HG E FE M + ++PD +TFI +LNAC H GLV++
Sbjct: 414 DKSIDHWNAIIGGLAIHGLGE---VAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKE 470
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G F+LM + +++EP+++HYGC+VD+LGRAG EEA + V+ M IEP++VVW +LL+ C
Sbjct: 471 GLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMPIEPNDVVWRTLLSAC 530
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+ + E K LI +D N ++L+NIY G W++V ++R M+K R+ K PG
Sbjct: 531 RNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYAGFGMWNDVYRIRMMMKQRDLKKIPG 590
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
CS IE++ VH+F DK+HP+ EIY L+S+ AL
Sbjct: 591 CSQIELEGNVHEFFVRDKSHPQVREIYSMLDSLSAL 626
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 126/532 (23%), Positives = 238/532 (44%), Gaps = 70/532 (13%)
Query: 1 MVSVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLG-QSQTNFYAFKLVRFCTLKL 59
++S T+ L +L + ++ + Q+ S L T G + + ++ F +
Sbjct: 2 LISATSNQPWNSTHPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSH 61
Query: 60 SNLT-YARFIF-------DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQ 111
L +AR++F H N +L+ A+I ++ S AF ++ M+ G
Sbjct: 62 KPLVEFARYLFMSRHFGRKHRKQDNPFLWNAIIKSF-SHGEDPREAFVIFNLMLENGVCV 120
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
++F + VLK+C + + +H + + ++ L+ Y R G +GIAR+
Sbjct: 121 -DKFSFSLVLKACSRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGC-LGIARQ 178
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP--DRDVPAWNSVIAGC--TQNGL 227
LFD M R+ VS+ +MI GY + G +K+A LFD MP +++ +WNS+I+G ++ GL
Sbjct: 179 LFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGL 238
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
R+ E+ + + P + L+ S I G ++ GK+ + + N + +
Sbjct: 239 ---------RVAWELFEEM-PKR-DLISWNSMI--DGCVKCGKMENAHHLFNQMPKRDVV 285
Query: 288 SNA-LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQ 346
S A ++D Y K G + AR FD ++ + S N+M+ + +G ++ F +M+ +
Sbjct: 286 SWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRK 345
Query: 347 DHNIRPDGVTFISLLNACTHGGLVEQ-------------------GRAYFKLMTKTYRI- 386
+ + PD T + L+A G ++ G A + K I
Sbjct: 346 E--LFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSID 403
Query: 387 ----------EPQIEHYGCLVDLLGRAGRFEEALEVVKGMK---IEPDEVVWGSLLNGCK 433
+ I+H+ ++ L G E A E+ M+ ++PD++ + +LN C
Sbjct: 404 NALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACN 463
Query: 434 IYGRTDFAEFA---VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK-VRKM 481
G ++++ +++P YG M+ +I G G +E +K V KM
Sbjct: 464 HAGLVKEGLMCFELMRRVHKVEPKLQHYGCMV-DILGRAGHVEEAKKFVEKM 514
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 276/476 (57%), Gaps = 46/476 (9%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYA---SQPAHAS-SAFSLYRDMVRRGQPQPN 113
+L + T+ F H T ++L+ +I A+ +QP + S S++ M G QP+
Sbjct: 6 RLISSTHPTLHFSH-PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGV-QPD 63
Query: 114 QFIYPHVLKS--CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
+P +L+S P +L + VH QI++ G P V+T+L++ YS S
Sbjct: 64 FHTFPFLLQSFASPSLLHL--GRSVHAQILRFGLAIDPFVQTSLISMYSSS--------- 112
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
G + A +LF MP+R+V +W+ +I G + G + +A
Sbjct: 113 -----------------------GLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEA 149
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
++ FR M M +++RPN+ T+ L+A G G L+ GK H Y+ + G+ +D + AL
Sbjct: 150 LALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTAL 209
Query: 292 IDMYGKCGSLKEARRAF-DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
IDMY KCGS+++A F + K + +W++MI+ A+HG +E + +F +M+ + +
Sbjct: 210 IDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMI---NQGV 266
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
RP+ VTF+++ AC HGGLV +G+ Y + MT+ Y I P I+HYGC+VDL GRAGR +EA
Sbjct: 267 RPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAW 326
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELG 470
VVK M +EPD +VWG+LL+G +++G + E A+KKLIE++P N G ++L+N+Y + G
Sbjct: 327 NVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRG 386
Query: 471 KWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+W++VR VR +++ K PGCS IEV +H+F D +HP T +I+ LE ++
Sbjct: 387 RWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEIL 442
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/464 (35%), Positives = 260/464 (56%), Gaps = 41/464 (8%)
Query: 65 ARFIFDHLTTP-NTYLYTAMITAYASQPAHASSAFSLYRDM-VRRGQPQPNQFIYPHVLK 122
AR +F+ + N +TAMI Y + SL+R M V + QPN +L
Sbjct: 178 ARDLFEEMPMRRNVVCWTAMINGYGKE-GDFVEMLSLFRQMLVSADEVQPNAATMVCLLS 236
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
+C + + + I + P+ N +
Sbjct: 237 ACSTLCNYEVGRFLSVFI---DVNKIPL-----------------------------NTI 264
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
TA+I Y++ GD++ A +FD + +++P+WN++I GC Q GL +AI +R M +
Sbjct: 265 LVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQ- 323
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
+++PN++TLV LSA G L+LG+ +H Y+ RNGLDL+ ++ AL+DMY KCG +
Sbjct: 324 --SVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKID 381
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
+A F + S+K + WN+MI A HG +S+ VF +M+R ++P+ VTFI +L+
Sbjct: 382 DACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRA---GVQPNDVTFIGVLS 438
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC H GLVE+GR F M + + P++EHY C+VDLLGRAG +EA E+V+ M I PD
Sbjct: 439 ACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDS 498
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
++WG+LL+ C+I+ + A+ + ++ N G+ I+L+NIY G+W +V +VR+ +
Sbjct: 499 IIWGALLSACRIHRNLELADKISETIMASQDPNIGFCILLSNIYASSGRWKDVARVRRQV 558
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K++ K GCSW+EVD VH+F D TH ++ EIY A E +V
Sbjct: 559 KEKRIKKPSGCSWVEVDGVVHRFVVEDTTHLKSGEIYGAYEILV 602
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 215/402 (53%), Gaps = 12/402 (2%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+ L ++ YARF+ D +P + + ++I AY + +S F LY M+R +P+ F
Sbjct: 38 IDLHSIDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLF-LYLKMLR-SSTKPSNFT 95
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+P VLK+C + + +HT +++ GF V +L++ Y + + AR +D+M
Sbjct: 96 FPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFR-LDSARNFWDDM 154
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMP-DRDVPAWNSVIAGCTQNGLFSDAISFF 235
R+ VSW ++ISGY + G ++ A LF+ MP R+V W ++I G + G F + +S F
Sbjct: 155 GFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLF 214
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
R+M + +D ++PN T+VC LSA ++G+ + ++ N + L++ + ALIDMY
Sbjct: 215 RQM-LVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMY 273
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCG +++A R FD S K L SWN++I G E +I ++ M + +++P+ +
Sbjct: 274 SKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHM---KAQSVKPNEI 330
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
T +++L+AC G +E GR + + ++ + LVD+ + G+ ++A +
Sbjct: 331 TLVNVLSACAGLGALELGREVHLYLGRN-GLDLNVILATALVDMYAKCGKIDDACLIFVK 389
Query: 416 MKIEPDEVVWGSLLNGCKIY--GRTDFAEFAVKKLIEIDPNN 455
E D +W +++ G + GR A F+ + PN+
Sbjct: 390 TS-EKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPND 430
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 237/388 (61%), Gaps = 8/388 (2%)
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD-RNVVSWTAMISGYTRV 194
VH VK+G V A ++ Y G D+ RK+FDE+ R+VV+W A+++GY R
Sbjct: 154 VHALAVKAGAAGDLYVRNAQIHFYGVCG-DVAAMRKVFDELPIVRDVVTWNAVLAGYVRA 212
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + A +FD MP RD +W++VI G + G A+ F+ M V+ ++ N+ +V
Sbjct: 213 GMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNM---VAQGVKANEAAIV 269
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
ALSA G+L+ GK +H V R G+ + + ALIDMY KCGS+ A+ FD ++
Sbjct: 270 TALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRR 329
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ +WNSMI A HG +++ +FE+ + P +TF+ +LNAC+ GLV++GR
Sbjct: 330 DVFAWNSMICGLATHGLGHDAVQLFEKFV---SEGFCPTSITFVGVLNACSRTGLVDEGR 386
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
YFKLM + Y IE ++EHYGC+VDLL RAG +EA+E+++GM+I PD V+WG++L+ CK
Sbjct: 387 RYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKR 446
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+G D KLIE+DP + GY ++LA+IY + KWDEVRKVRK++ +R K+ G S
Sbjct: 447 HGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKSAGWS 506
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+E VH+F D H + IY+ L
Sbjct: 507 LMEAHGIVHKFLVGDMNHKDSARIYNML 534
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 139/358 (38%), Gaps = 87/358 (24%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + ++ +I Y + A ++++MV +G + N+ L +
Sbjct: 218 AREVFDGMPVRDEVSWSTVIGGYVKE-GEPEVALGVFKNMVAQGV-KANEAAIVTALSAA 275
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ K VH + + G + AL++ YS+ G+ + A+++FD M R+V +W
Sbjct: 276 AQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGS-VAAAKEVFDAMPRRDVFAW 334
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+MI G +GL DA+ F + VS+
Sbjct: 335 NSMICGL-------------------------------ATHGLGHDAVQLFEKF---VSE 360
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
P +T V L+A TG++ E
Sbjct: 361 GFCPTSITFVGVLNACSRTGLVD-----------------------------------EG 385
Query: 305 RRAFDRNSKK-----RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
RR F ++K + + M++ + G + ++ + E M I PD V + +
Sbjct: 386 RRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGM------RIPPDPVLWGT 439
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE-HYGCLVDLLGRAGRFEEALEVVKGM 416
+L+AC GLV+ G + K ++P + +Y L + +A +++E +V K M
Sbjct: 440 ILSACKRHGLVDLG---ITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLM 494
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 80/211 (37%), Gaps = 37/211 (17%)
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR-- 315
+A G +G +H + G D ++ NA I YG CG + R+ FD R
Sbjct: 140 AAAGSIASRFMGTHVHALAVKAGAAGDLYVRNAQIHFYGVCGDVAAMRKVFDELPIVRDV 199
Query: 316 ------------------------------LTSWNSMINSFALHGQSENSICVFEEMMRC 345
SW+++I + G+ E ++ VF+ M+
Sbjct: 200 VTWNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVA- 258
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
++ + ++ L+A GL+EQG+ + + K + + L+D+ + G
Sbjct: 259 --QGVKANEAAIVTALSAAAQLGLLEQGK-FVHEVVKRVGMTMSVNLGAALIDMYSKCGS 315
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
A EV M D W S++ G +G
Sbjct: 316 VAAAKEVFDAMP-RRDVFAWNSMICGLATHG 345
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 177/551 (32%), Positives = 293/551 (53%), Gaps = 71/551 (12%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT-LKLSNLTYARFIFDH 71
+ + +L+ C + HLKQ+Q+ + G Q+ K + CT + NL YA IF++
Sbjct: 32 KKSCIFLLKNCKSMQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNY 91
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ P ++Y +I A+ ++ A L+R + G P+ F YP V K+ + E R
Sbjct: 92 IDIPGLFIYNLVIKAF-TKNGSFRKAVLLFRQLREEGL-SPDNFTYPFVFKAIGCLGEVR 149
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSG---------------------------- 163
+ V+ +VKSG E V +L++ Y+ G
Sbjct: 150 EGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYV 209
Query: 164 ------NDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNS 217
+ + + R++F++M + V+ WT+M+SGY G + A LF+ P RDV W +
Sbjct: 210 KCRRYEDAVDVFRQIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTA 269
Query: 218 VIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVY 277
+I G Q F DA++ FR M ++ + P++ TLV L+
Sbjct: 270 MINGYVQFNRFDDAVALFREMQIK---RVSPDRFTLVALLT------------------- 307
Query: 278 RNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSIC 337
D+ + ALI+MY KCG ++++ F+ +K SW S+I A++G++ ++
Sbjct: 308 ------DAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALE 361
Query: 338 VFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLV 397
+F EM++ ++PD +TFI +L+AC+HGGLVE+GR +F+ MT Y+IEP++EHYGCL+
Sbjct: 362 LFAEMVQT---GVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLI 418
Query: 398 DLLGRAGRFEEALEVVKGMKIEPDEVV---WGSLLNGCKIYGRTDFAEFAVKKLIEIDPN 454
DLLGRAG+ +EA E+++ +EV+ +G+LL+ C+ +G + E K+L+ I+
Sbjct: 419 DLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESG 478
Query: 455 NGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPR 514
+ +LANIY +W++V KVR+ +KD K PGCS +EV+ VH+F D +HP
Sbjct: 479 DSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPE 538
Query: 515 TEEIYDALESM 525
EIY L+S+
Sbjct: 539 MREIYSMLDSI 549
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/582 (32%), Positives = 297/582 (51%), Gaps = 77/582 (13%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
+ L +Q L+ L +C ++N +KQL + + F KL+ +L + A F
Sbjct: 17 RKLLEQKLSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSL-CRQMLLATNAF 75
Query: 70 DHLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+ + PN +LY MI A++ SQP S AF+ + M R G N F +P +LK C
Sbjct: 76 NQVQYPNVHLYNTMIRAHSHNSQP---SQAFATFFAMQRDGHYADN-FTFPFLLKVCTGN 131
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN-DIGIARKLFDEM-SDRNVVSWT 185
+ + VH QI K GF V +L++SYS+ G+ I A+KLF M + R+VVSW
Sbjct: 132 VWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWN 191
Query: 186 AMIS-------------------------------GYTRVGDIKNAASLFDSMPDRDVPA 214
+MIS GY +VG + +A LFD MP+R+V +
Sbjct: 192 SMISGLAKGGLYEEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVS 251
Query: 215 WNS-------------------------------VIAGCTQNGLFSDAISFFRRMGMEVS 243
W++ +++G + GL +AIS F +M
Sbjct: 252 WSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKAC- 310
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
++ + T++ L+A +G+L LG+ IH + N + ISNAL+DMY KCG L
Sbjct: 311 --LKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNI 368
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A F+ K + SWN+M+ A+HG ++ +F+ M ++ P+ VT I +L A
Sbjct: 369 AYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRM---KEEGFSPNKVTMIGVLCA 425
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
CTH GL++ G YF M + Y + P++EHYGC+VDLLGR GR EEA+ +++ M + P+ +
Sbjct: 426 CTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAI 485
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+WG+LL C+++ + A + L+E++P + G ML+NIY G W+ V R ++
Sbjct: 486 IWGTLLGACRMHNAVELAREVLDHLVELEPTDSGNFSMLSNIYAAAGDWNCVANTRLRMR 545
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K G S IEV+ +VH+F D++HP+++ IY + +
Sbjct: 546 SIGTKKPSGASSIEVNNEVHEFTVFDRSHPKSDNIYQVINGL 587
>gi|296089864|emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/515 (32%), Positives = 279/515 (54%), Gaps = 40/515 (7%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHL 72
+ +L++L+ CN + L ++ + + G + KL+ FC + +S +L YA+ +F +
Sbjct: 6 RAILSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRI 65
Query: 73 TTPNTYLYTAMITAYASQPAHAS-SAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
P T + +MI ++ P+ A Y M+ +P+ + + +LK+C + E
Sbjct: 66 HNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEG 125
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
+ VH I++ G++Q V+ T L+ SY+ GN
Sbjct: 126 KCREVHGFIIRFGYDQDVVLCTNLIRSYA--GN--------------------------- 156
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
G I+ A +F+ MP RD+ +WNS+I+ Q GL +A+ + +M + N+ +
Sbjct: 157 ---GLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRI---SNVGFDGF 210
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
TLV LS+ H G L +G +H + L + F+ NALIDMY KCGSL A F+
Sbjct: 211 TLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSM 270
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K+ + +WNSMI + +HG+ + +I F M+ +RP+ +TF+ LL C+H GLV+
Sbjct: 271 PKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMA---GVRPNSITFLGLLCGCSHQGLVK 327
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G YF +M+ + ++P I+HYGC+VDL GRAG+ +EALEV++ + D V+W +LL
Sbjct: 328 EGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGS 387
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
CKI+ + E A++ L+++ G ++L+ IY E V ++RK+++ R TP
Sbjct: 388 CKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTP 447
Query: 492 GCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
G SWIEV QVH+F DK+HP + EIY LE ++
Sbjct: 448 GWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVI 482
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 155/378 (41%), Positives = 239/378 (63%), Gaps = 12/378 (3%)
Query: 155 LVNSYSRSGNDIGIARKLF-----DEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
+++S +R G D+ + RKL + + +V A++ Y + GD A +F MP
Sbjct: 232 VLSSCARLG-DLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPV 290
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
++V +WNS+I+G Q G F +++ FR+M ++P+ VTLV L++ + G+L+LG
Sbjct: 291 KNVVSWNSMISGLAQKGQFKESLYMFRKMQ---RLGVKPDDVTLVAVLNSCANLGVLELG 347
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
K +H Y+ RN + D FI NAL+DMY KCGS+ +A F ++K + S+ +MI A+H
Sbjct: 348 KWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMH 407
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
GQ ++ +F EM + I PD VTF+ +L AC+H GLVE+GR YF+ M+ Y + PQ
Sbjct: 408 GQGGKALDLFSEMPK---MGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQ 464
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
+EHYGC+VDLLGRAG EA E ++ M IEPD V G+LL CKI+G+ + E +KK+
Sbjct: 465 LEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIE 524
Query: 450 EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLD 509
+I+P G ++++NIY +W + K+RK +K+RN KTPGCS IE+D +H+F D
Sbjct: 525 KIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGD 584
Query: 510 KTHPRTEEIYDALESMVA 527
K+HP+ +EIY L+ +++
Sbjct: 585 KSHPKIKEIYKLLDEIMS 602
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 145/520 (27%), Positives = 227/520 (43%), Gaps = 95/520 (18%)
Query: 17 LAILERCNHINHLKQLQ-SFLTTLGQSQTNF-YAFKLVRFCTLKLS-NLTYARFIFDHLT 73
L+ L+ C I LKQ+ S + T+ + +L C L + YA + L
Sbjct: 26 LSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLR 85
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
TPN LY A+I A+ + +Y+ M+ +G P+ + P VLK+C + R
Sbjct: 86 TPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGI-VPDNYTIPFVLKACAESRAVREG 144
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+ VH Q +K G V L+ Y+ + I ARK+FD R++VSWT MI GY +
Sbjct: 145 EEVHGQAIKMGLASDVYVSNTLMRMYAVC-DVIRSARKVFDTSPQRDLVSWTTMIQGYVK 203
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
+G + LF M +N++ + +TL
Sbjct: 204 MGFAREGVGLFFEM----------------------------------CGENLQADGMTL 229
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNG-LDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
V LS+ G L+LG+ +H Y+ RN ++LD F+ NAL+DMY KCG AR+ F
Sbjct: 230 VIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMP 289
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
K + SWNSMI+ A GQ + S+ +F +M R ++PD VT +++LN+C + G++E
Sbjct: 290 VKNVVSWNSMISGLAQKGQFKESLYMFRKMQRL---GVKPDDVTLVAVLNSCANLGVLEL 346
Query: 373 GRAYFKLMTKTYRIEPQIEHYG----CLVDLLGRAGRFEEALEVVKGMK----------- 417
G+ Y QI G LVD+ + G ++A V + M
Sbjct: 347 GK-----WVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMI 401
Query: 418 -----------------------IEPDEVVWGSLLNGCKIY-----GRTDFAEFAVKKLI 449
IEPDEV + +L C GR F + + +
Sbjct: 402 VGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMST--IY 459
Query: 450 EIDPNNGGYGIMLANIYGELGKWDEVRK-VRKMLKDRNAY 488
+ P YG M+ ++ G G +E + +R M + +A+
Sbjct: 460 NLRPQLEHYGCMV-DLLGRAGLINEAEEFIRNMPIEPDAF 498
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 149/365 (40%), Gaps = 83/365 (22%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
LK + +AR +F + N + +MI+ A Q + ++R M R G +P+
Sbjct: 273 LKCGDANFARKVFQEMPVKNVVSWNSMISGLA-QKGQFKESLYMFRKMQRLGV-KPDDVT 330
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
VL SC ++ K VH + ++ + ALV+ Y++ G+ I A +F M
Sbjct: 331 LVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGS-IDQACWVFQAM 389
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+ ++V S+TAMI G G A LF MP
Sbjct: 390 NRKDVYSYTAMIVGLAMHGQGGKALDLFSEMP---------------------------- 421
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH---GYVYRNGLDLDSFISNALID 293
+MG+E P++VT V L+A H G+++ G+ +Y L+ + ++D
Sbjct: 422 KMGIE------PDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHY--GCMVD 473
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
+ G+ G + EA EE +R + I PD
Sbjct: 474 LLGRAGLINEA-----------------------------------EEFIR--NMPIEPD 496
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE-HYGCLVDLLGRAGRFEEALEV 412
+LL AC G VE G + +M K +IEP+ + Y + ++ A R+ +AL++
Sbjct: 497 AFVLGALLGACKIHGKVELGES---VMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKL 553
Query: 413 VKGMK 417
K MK
Sbjct: 554 RKTMK 558
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 157/388 (40%), Positives = 238/388 (61%), Gaps = 8/388 (2%)
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS-DRNVVSWTAMISGYTRV 194
+H+ +V++G P +LV +Y G+ + AR++FDE + +VVSW MI GY +
Sbjct: 97 LHSLLVRAGHAADPHASASLVQAYCSCGS-VASARRVFDETAASADVVSWNVMIDGYVKS 155
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
GD+ A LFD MP R+V +W VI Q +AI FRRM +E I P+ V L+
Sbjct: 156 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVE---GIEPDGVALL 212
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
LSA G G++ LG+ +H +V R GL + + NA+IDMY KCGS+K+A F+ +K
Sbjct: 213 SVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQK 272
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ +W +MI FALHG ++ +F M + N+ P+ +TF+++L+ C+H GL + GR
Sbjct: 273 SIVTWTTMIAGFALHGLGLEAVELFRRM---EKENVSPNDITFLAVLSVCSHVGLTDLGR 329
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
YFK M Y+I+P++EHYGC++DLLGRAG EA +++ M + + +WG+LL +
Sbjct: 330 WYFKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAART 389
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+G T+ E A+ LIE++P+N G I+L+NIY E +WD VR++R ++DR PG S
Sbjct: 390 HGDTELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGAS 449
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
I+VD VH+F S D +HP +I + L
Sbjct: 450 SIDVDGMVHEFTSRDGSHPSLHKIREVL 477
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 129/297 (43%), Gaps = 43/297 (14%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K +L AR +FD + N +T +I AYA Q A ++R M G +P+
Sbjct: 153 VKSGDLARARELFDVMPGRNVVSWTMVIGAYA-QMKQPEEAIEVFRRMQVEGI-EPDGVA 210
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
VL +C D+ + VH +++ G Q + A+++ Y + G+ + A ++F+ M
Sbjct: 211 LLSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGS-VKKALEVFEGM 269
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+++V+WT MI+G+ +GL +A+ FR
Sbjct: 270 EQKSIVTWTTMIAGF-------------------------------ALHGLGLEAVELFR 298
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV---YRNGLDLDSFISNALID 293
RM E N+ PN +T + LS H G+ LG+ + Y+ ++ + +ID
Sbjct: 299 RMEKE---NVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHY--GCMID 353
Query: 294 MYGKCGSLKEARRAF-DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
+ G+ G L EAR D K W +++ + HG +E ++ + HN
Sbjct: 354 LLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQALLHLIELEPHN 410
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 171/525 (32%), Positives = 296/525 (56%), Gaps = 51/525 (9%)
Query: 16 VLAILERC---------NHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN---LT 63
+L ++E+C + I L+Q+ +F G S ++ K + F + L + ++
Sbjct: 11 LLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMS 70
Query: 64 YARFIFDHLTTP-NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
YA +F + P N +++ +I YA + ++ SAFSLYR+M G +P+ YP ++K
Sbjct: 71 YAHKVFSKIEKPINVFIWNTLIRGYA-EIGNSISAFSLYREMRVSGLVEPDTHTYPFLIK 129
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
+ + + R + +H+ +++SGF V+ +L++ Y+
Sbjct: 130 AVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYAN--------------------- 168
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
GD+ +A +FD MP++D+ AWNSVI G +NG +A++ + M
Sbjct: 169 -----------CGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMN--- 214
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
S I+P+ T+V LSA G L LGK +H Y+ + GL + SN L+D+Y +CG ++
Sbjct: 215 SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVE 274
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
EA+ FD K SW S+I A++G + +I +F+ M + + P +TF+ +L
Sbjct: 275 EAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE--GLLPCEITFVGILY 332
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H G+V++G YF+ M + Y+IEP+IEH+GC+VDLL RAG+ ++A E +K M ++P+
Sbjct: 333 ACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 392
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
V+W +LL C ++G +D AEFA ++++++PN+ G ++L+N+Y +W +V+K+RK +
Sbjct: 393 VIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQM 452
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
K PG S +EV +VH+F DK+HP+++ IY L+ M
Sbjct: 453 LRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTG 497
>gi|359487598|ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/515 (32%), Positives = 279/515 (54%), Gaps = 40/515 (7%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHL 72
+ +L++L+ CN + L ++ + + G + KL+ FC + +S +L YA+ +F +
Sbjct: 24 RAILSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRI 83
Query: 73 TTPNTYLYTAMITAYASQPAHAS-SAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
P T + +MI ++ P+ A Y M+ +P+ + + +LK+C + E
Sbjct: 84 HNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEG 143
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
+ VH I++ G++Q V+ T L+ SY+ GN
Sbjct: 144 KCREVHGFIIRFGYDQDVVLCTNLIRSYA--GN--------------------------- 174
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
G I+ A +F+ MP RD+ +WNS+I+ Q GL +A+ + +M + N+ +
Sbjct: 175 ---GLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRI---SNVGFDGF 228
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
TLV LS+ H G L +G +H + L + F+ NALIDMY KCGSL A F+
Sbjct: 229 TLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSM 288
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K+ + +WNSMI + +HG+ + +I F M+ +RP+ +TF+ LL C+H GLV+
Sbjct: 289 PKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMA---GVRPNSITFLGLLCGCSHQGLVK 345
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G YF +M+ + ++P I+HYGC+VDL GRAG+ +EALEV++ + D V+W +LL
Sbjct: 346 EGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGS 405
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
CKI+ + E A++ L+++ G ++L+ IY E V ++RK+++ R TP
Sbjct: 406 CKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTP 465
Query: 492 GCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
G SWIEV QVH+F DK+HP + EIY LE ++
Sbjct: 466 GWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVI 500
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 283/506 (55%), Gaps = 16/506 (3%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF-DHLTTP 75
L+ L++C LKQ+ + + G Q + YA L S +YA +F + P
Sbjct: 15 LSCLQKCPTEVELKQIHARMLKSGLLQ-DPYAMTKFLSFCLSSSFSSYAHDVFFNGFDRP 73
Query: 76 NTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
+T+L+ MI + QP + LY M+ P N + +P +LK+C ++ + T
Sbjct: 74 DTFLWNLMIRGLSCSDQP---DRSLLLYHRMLCCSAPH-NAYTFPFLLKACSNLSAFQET 129
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+H I K G+ +L+NSY+ +GN A LFD + + + VSW ++I GY +
Sbjct: 130 TQIHAHITKFGYGHDIYAVNSLINSYAVTGN-FKHAHLLFDRIQEPDAVSWNSVIKGYVK 188
Query: 194 VGDIKNAASLFDSMPDRD-VPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
G++ A +LF MP+++ +W ++I+G Q G+ +A+ F M + N+ P+ V+
Sbjct: 189 AGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQ---NSNVPPDNVS 245
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
L ALSA G L+ GK IH Y + +DS + LIDMY KCG ++EA F
Sbjct: 246 LASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMK 305
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
K + W ++I+ +A HG +I F EM Q+ ++P+ +TF ++L AC++ GLVE+
Sbjct: 306 TKSVQVWTALISGYAYHGLGREAISKFLEM---QNMGVKPNAITFTAVLTACSYTGLVEE 362
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G++ F + + Y ++P IEHYGC+VDLLGRAG EA ++ M ++P+ V+WGSLL C
Sbjct: 363 GKSVFNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKAC 422
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+I+ + E + LIE+D N+GG + +ANI+ KWD+ + R++++++ K PG
Sbjct: 423 QIHKNIELGEKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPG 482
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEI 518
CS I ++ H+F + D++H +EI
Sbjct: 483 CSAISLEGTTHEFLAGDRSHAEIQEI 508
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 147/378 (38%), Gaps = 77/378 (20%)
Query: 113 NQFIYPH---VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIA 169
+ F + H L+ CP +E K +H +++KSG Q P T ++ S
Sbjct: 7 SSFAFEHNLSCLQKCPTEVE---LKQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAH 63
Query: 170 RKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
F+ + W MI G + PDR
Sbjct: 64 DVFFNGFDRPDTFLWNLMIRGLS-----------CSDQPDR------------------- 93
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
++ + RM + + N T L A + Q IH ++ + G D + N
Sbjct: 94 -SLLLYHRM---LCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHITKFGYGHDIYAVN 149
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM------- 342
+LI+ Y G+ K A FDR + SWNS+I + G+ + ++ +F +M
Sbjct: 150 SLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFRKMPEKNNAI 209
Query: 343 ----------------------MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
Q+ N+ PD V+ S L+AC+ G +EQG+
Sbjct: 210 SWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWIHSYA 269
Query: 381 TKTYRIEPQIEHYGC--LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY--G 436
KT +I+ C L+D+ + G EEAL V K MK + + VW +L++G + G
Sbjct: 270 NKT---RTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQ-VWTALISGYAYHGLG 325
Query: 437 RTDFAEFAVKKLIEIDPN 454
R ++F + + + PN
Sbjct: 326 REAISKFLEMQNMGVKPN 343
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 181/578 (31%), Positives = 298/578 (51%), Gaps = 83/578 (14%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
++++ H LKQ+ + L LG + F KL+ + ++T+AR +FD L P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH-ASSSFGDITFARQVFDDLPRPQI 84
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+ + A+I Y S+ H A +Y +M + + P+ F +PH+LK+C + + + VH
Sbjct: 85 FPWNAIIRGY-SRNNHFQDALLMYSNM-QLARVSPDSFTFPHLLKACSGLSHLQMGRFVH 142
Query: 138 TQIVKSGF---------------------------EQYPVVE------TALVNSYSRSGN 164
Q+ + GF E P+ E TA+V++Y+++G
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202
Query: 165 DIGIARKLFDEMSDRNV-VSWTAMIS---------------------------------- 189
+ A ++F +M +V W A++S
Sbjct: 203 PME-ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 190 ----GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
Y + G + A LFD M ++ WN++I+G +NG +AI F M ++ +
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM---INKD 318
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
+RP+ +++ A+SA G L+ + ++ YV R+ D FIS+ALIDM+ KCGS++ AR
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
FDR + + W++MI + LHG++ +I ++ M R H P+ VTF+ LL AC
Sbjct: 379 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVH---PNDVTFLGLLMACN 435
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
H G+V +G +F M ++I PQ +HY C++DLLGRAG ++A EV+K M ++P VW
Sbjct: 436 HSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVW 494
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
G+LL+ CK + + E+A ++L IDP+N G+ + L+N+Y WD V +VR +K++
Sbjct: 495 GALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEK 554
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K GCSW+EV ++ F DK+HPR EEI +E
Sbjct: 555 GLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVE 592
>gi|62321090|dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
Length = 577
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 166/480 (34%), Positives = 273/480 (56%), Gaps = 43/480 (8%)
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ PN ++Y A+ + + +H + LY M+R P+ + Y ++K+ S
Sbjct: 85 QMQEPNVFVYNALFKGFVT-CSHPIRSLELYVRMLR-DSVSPSSYTYSSLVKASS--FAS 140
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
R + + I K GF + ++T L++ YS +G I ARK+FDEM +R+ ++WT M+S
Sbjct: 141 RFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGG-IREARKVFDEMPERDDIAWTTMVSA 199
Query: 191 YTRV-------------------------------GDIKNAASLFDSMPDRDVPAWNSVI 219
Y RV G+++ A SLF+ MP +D+ +W ++I
Sbjct: 200 YRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMI 259
Query: 220 AGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN 279
G +QN + +AI+ F +M + + I P++VT+ +SA H G+L++GK +H Y +N
Sbjct: 260 KGYSQNKRYREAIAVFYKM---MEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQN 316
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
G LD +I +AL+DMY KCGSL+ A F KK L WNS+I A HG ++ ++ +F
Sbjct: 317 GFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMF 376
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
+M + +++P+ VTF+S+ ACTH GLV++GR ++ M Y I +EHYG +V L
Sbjct: 377 AKM---EMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHL 433
Query: 400 LGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYG 459
+AG EALE++ M+ EP+ V+WG+LL+GC+I+ AE A KL+ ++P N GY
Sbjct: 434 FSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYY 493
Query: 460 IMLANIYGELGKWDEVRKVRKMLKDRNAYKT-PGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
+L ++Y E +W +V ++R +++ K PG S I +DK+ H F + DK+H ++E+
Sbjct: 494 FLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEV 553
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 174/507 (34%), Positives = 275/507 (54%), Gaps = 43/507 (8%)
Query: 23 CNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHLTTPNTYLYT 81
C I+ KQ + L ++ KL+ F L S +L YAR +F + P+ ++
Sbjct: 21 CTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICN 80
Query: 82 AMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIV 141
MI YA + + A SLY MV RG P N + YP VL +C + + + H +++
Sbjct: 81 TMIRGYA-RSQNPYEAVSLYYFMVERGVPVDN-YTYPFVLAACARLGAVKLGRRFHCEVL 138
Query: 142 KSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAA 201
K+GF G+D+ + A+I Y G A
Sbjct: 139 KNGF-----------------GSDLFVI---------------NALIQFYHNCGSFGCAC 166
Query: 202 SLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIG 261
+FD RDV WN +I GL A M DN+RP++VT+V + A
Sbjct: 167 DVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTK--LDNLRPDEVTMVSLVPACA 224
Query: 262 HTGMLQLGKVIHGY---VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
G L+ GK +H Y + + ++ D + AL+DMY KCGS+ A + F R + + +
Sbjct: 225 QLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFT 284
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
WN++I A+HG E++I +F++M + + PD VTFI+LL AC+H GLV++G A F+
Sbjct: 285 WNALIGGLAMHGHGEDAISLFDQM---EHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQ 341
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
M ++IEP++EHYGC+VDLL RA + ++AL ++ M I+ + V+W +LL C+ G
Sbjct: 342 AMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHF 401
Query: 439 DFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV 498
D AE +++IE++P++ G +ML+N+Y + +WD K+RK +K++ KTPGCSWIE+
Sbjct: 402 DLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIEL 461
Query: 499 DKQVHQFHSLDKTHPRTEEIYDALESM 525
+ +HQF + D++H +TE+IY +E M
Sbjct: 462 NGMIHQFVAGDRSHLQTEQIYAMIEEM 488
>gi|297745510|emb|CBI40590.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 176/501 (35%), Positives = 277/501 (55%), Gaps = 57/501 (11%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMIT 85
+N LKQ+Q++ G T K + L++ ++ YA +FD + P +LY +I
Sbjct: 1 MNRLKQIQAYTLRNGIEHT-----KQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQ 55
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
AY+S H FSLY M +G PN+ + + +C + + +M+HT VKSGF
Sbjct: 56 AYSSHGPH-HQCFSLYTQMCLQG-CSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGF 113
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
TALV+ Y++ G + +ARK FDEM+ R+V +W +MI+GY R GD++ A LF
Sbjct: 114 GCDVFALTALVDMYAKLGL-LSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFR 172
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
MP R+V +W ++I+G QNG ++ A+S F + ME +RPN+VTL L A + G
Sbjct: 173 LMPARNVTSWTAMISGYAQNGQYAKALSMF--LMMEEETEMRPNEVTLASVLPACANLGA 230
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR-NSKKRLTSWNSMIN 324
L++G+ I Y NG + ++SNAL++MY +CG + +A F+ + ++ L SWNSMI
Sbjct: 231 LEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIM 290
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
A+HG+ + +I +F +M+R PD VTF+ +L ACTHGG+V +G+ +F+ M + +
Sbjct: 291 GLAVHGRCDEAIELFYKMLR---EGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDF 347
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
I P++EHYGC+VDLLG F
Sbjct: 348 SIAPKLEHYGCMVDLLGPGALF-------------------------------------- 369
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
E++P+N G ++L+NIY G+WD V ++RK++K K G S+IE +H+
Sbjct: 370 -----ELEPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHK 424
Query: 505 FHSLDKTHPRTEEIYDALESM 525
F D++H R++EIY L+ +
Sbjct: 425 FIVEDRSHSRSDEIYALLDEV 445
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 161/513 (31%), Positives = 287/513 (55%), Gaps = 42/513 (8%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
+ + +L RC ++ H++Q+ + + G Q A KL+ + + + A +FD LT
Sbjct: 4 ESCIDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLL-YTYAQHKAIDDAYSLFDGLT 62
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
++ ++ M+ +A HA ++ +R+++R G P+ + P V+++C D + +
Sbjct: 63 MRDSKTWSVMVGGFAKAGDHAG-CYATFRELLRCG-VTPDNYTLPFVIRTCRDRTDLQIG 120
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+++H ++K G +SD V + +++ Y +
Sbjct: 121 RVIHDVVLKHGL------------------------------LSDHFVCA--SLVDMYAK 148
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
+++A LF+ M +D+ W +I + +++ F RM E + P++V +
Sbjct: 149 CIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAY-ESLVLFDRMREE---GVVPDKVAM 204
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
V ++A G + + + Y+ RNG LD + A+IDMY KCGS++ AR FDR +
Sbjct: 205 VTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKE 264
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K + SW++MI ++ HG+ +++I +F M+ C I P+ VTF+SLL AC+H GL+E+G
Sbjct: 265 KNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCA---ILPNRVTFVSLLYACSHAGLIEEG 321
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
+F M + + + P ++HY C+VDLLGRAGR +EAL +++ M +E DE +W +LL C+
Sbjct: 322 LRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACR 381
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
I+ + + AE A L+E+ P N G+ ++L+NIY + GKW++V K R M+ R K PG
Sbjct: 382 IHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGW 441
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+WIEVD + +QF D++HP+++EIY+ L S++
Sbjct: 442 TWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLI 474
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 175/517 (33%), Positives = 281/517 (54%), Gaps = 57/517 (11%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL--SNLTYARFIFDHLTTPN 76
+ RC + +KQ+ + + G ++ A + + F + + +A +FD + P+
Sbjct: 14 LWRRCRSLRQIKQVHALMVLRG-FLSDPSALRELLFASAVAVRGAIAHAYLVFDQIPRPD 72
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQ---PQPNQFIYPHVLKSCPDVLESRGT 133
++Y +I A+ A A SLY M RRG +P++ +P VL++C +
Sbjct: 73 LFMYNTLIRG-AAHTAAPRDAVSLYARMARRGSCGGVRPDKITFPFVLRACTAMGAGGTG 131
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
VH +VK+G E V AL+ ++ G ++G+A LFD + + V+W+AMI+G R
Sbjct: 132 AQVHAHVVKAGCESDAFVRNALIGMHASCG-ELGVASALFDGRAREDAVAWSAMITGCAR 190
Query: 194 VGDIKNAASLFDS-------------------------------MPDRDVPAWNSVIAGC 222
GDI A LFD +P+RDV +WN++I+G
Sbjct: 191 RGDIVAARKLFDECPVKDHVSWNVMITAYAKRGEMAPARVLFNRIPERDVVSWNAMISGH 250
Query: 223 TQNGLFSDAISFF---RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV--- 276
+ G A+ F +RMG +P+ VT++ LSA +G + +G+ +H +
Sbjct: 251 VRCGSHVYAMELFEQMQRMGQ------KPDVVTMLSLLSACADSGDIDVGRRLHSSLSEM 304
Query: 277 -YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
R G + + NALIDMY KCGS+K A + F K +++WNS+I ALHG S
Sbjct: 305 FLRTGFTV--ILGNALIDMYAKCGSMKSALQVFWVMRDKDVSTWNSIIGGLALHGHVLES 362
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
I VF++M++ +RPD +TF+++L AC+HGG+V++GR YF LM YRIEP ++HYGC
Sbjct: 363 IDVFKKMLK---EKVRPDEITFVAVLIACSHGGMVDKGREYFNLMQHHYRIEPNVKHYGC 419
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNN 455
+VD+LGRAG +EA E + MK+EP+ V+W +LL C+++G + AE A ++L++ +
Sbjct: 420 MVDMLGRAGLLKEAFEFIDTMKVEPNSVIWRTLLGACRVHGEIELAEHANRQLLKARNDE 479
Query: 456 GGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
G ++L+NIY G+W E K+RK++ D K G
Sbjct: 480 SGDYVLLSNIYASAGEWSESEKMRKLMDDSGVNKQAG 516
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 182/580 (31%), Positives = 298/580 (51%), Gaps = 82/580 (14%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL-SNLTYARFIFDHLTTPNT 77
ILE+C I L ++ + L A L+ + L +++ YA IF + P++
Sbjct: 30 ILEQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDS 89
Query: 78 YLYTAMITAYA-SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
Y MI + Q H A L+++M QP++F +P +LK C + + +
Sbjct: 90 PAYNIMIRGFTLKQSPH--EAILLFKEM-HENSVQPDEFTFPCILKVCSRLQALSEGEQI 146
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIAR-------------------------- 170
H I+K GF + V+ L++ Y+ G ++ +AR
Sbjct: 147 HALIMKCGFGSHGFVKNTLIHMYANCG-EVEVARRVFDEMSERNVRTWNSMFAGYTKSGN 205
Query: 171 -----KLFDEM----------------------SDRNVVSW-----------------TA 186
KLF EM +D + W T+
Sbjct: 206 WEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITS 265
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
++ Y + G + A LFD M RDV AW+++I+G +Q +A+ F M NI
Sbjct: 266 LVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQ---KANI 322
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
PN++T+V LS+ G L+ GK +H ++ + + L + AL+D Y KCGS++ +
Sbjct: 323 DPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIE 382
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F + K + SW +I A +GQ + ++ F M+ + N+ P+ VTFI +L+AC+H
Sbjct: 383 VFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLML---EKNVEPNDVTFIGVLSACSH 439
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GLV++GR F M++ + IEP+IEHYGC+VD+LGRAG EEA + +K M I+P+ V+W
Sbjct: 440 AGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWR 499
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+LL CK++ + E ++K+LI ++P + G I+L+NIY +G+W++ KVR +K++
Sbjct: 500 TLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKG 559
Query: 487 AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
KTPGCS IE+D +H+F + D H ++EEIY+A+E M+
Sbjct: 560 IKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMM 599
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 159/463 (34%), Positives = 272/463 (58%), Gaps = 10/463 (2%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +F L NT +T +I + Q S + L+ M R +QF ++ C
Sbjct: 348 ARRVFSSLRDRNTVSWTVLIGGFL-QYGCFSESLELFNQM-RAELMTVDQFALATIISGC 405
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ ++ + +H+ +KSG + V+ +L++ Y++ GN + A +F M +R++VSW
Sbjct: 406 SNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGN-LQNAESIFSSMEERDIVSW 464
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T M++ Y++VG+I A FD M R+V WN+++ Q+G D + + M E
Sbjct: 465 TGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTE--K 522
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
++ P+ VT V G +LG I G+ + GL LD+ + NA+I MY KCG + EA
Sbjct: 523 DVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEA 582
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R+ FD S+K L SWN+MI ++ HG + +I +F++M++ +PD ++++++L++C
Sbjct: 583 RKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLK---KGAKPDYISYVAVLSSC 639
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLV++G+ YF ++ + + + P +EH+ C+VDLL RAG EA ++ M ++P V
Sbjct: 640 SHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEV 699
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEID-PNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
WG+LL+ CK +G + AE A K L ++D P++GGY ++LA IY + GK + +VRK+++
Sbjct: 700 WGALLSACKTHGNNELAELAAKHLFDLDSPDSGGY-MLLAKIYADAGKSVDSAQVRKLMR 758
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
D+ K PG SW+EV +VH F + D +HP+ I + L+ ++
Sbjct: 759 DKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELM 801
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 181/406 (44%), Gaps = 15/406 (3%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
KL +L+ A +F + + + +++ Y Q A + M R G PN F +
Sbjct: 107 KLGSLSDAEELFGRMPRRDVTSWNTLMSGY-YQSGRFLDAMESFVSMRRSGDSLPNAFTF 165
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+KSC + + + K GF+ P V T +V+ + R G + A K F ++
Sbjct: 166 GCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGA-VDFASKQFSQIE 224
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
V +M++GY + + +A LF+SMP+RDV +WN +++ +Q+G +A+S
Sbjct: 225 RPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVD 284
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M + +R + T +L+A L GK +H V R+ +D ++++A++++Y K
Sbjct: 285 MH---NRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAK 341
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG KEARR F + SW +I F +G S+ +F +M + + D
Sbjct: 342 CGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQM---RAELMTVDQFAL 398
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
++++ C++ + R L K+ + L+ + + G + A + M+
Sbjct: 399 ATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVIS-NSLISMYAKCGNLQNAESIFSSME 457
Query: 418 IEPDEVVWGSLLNGCKIYG-----RTDFAEFAVKKLIEIDPNNGGY 458
E D V W +L G R F + + +I + G Y
Sbjct: 458 -ERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAY 502
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 167/350 (47%), Gaps = 44/350 (12%)
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLF-DEMSDR 179
L+SC G + +H ++V G ++ L+++Y G + AR L ++++
Sbjct: 35 LRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGA-LPDARGLLRGDITEP 93
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
NV++ M++GY ++G + +A LF MP RDV +WN++++G Q+G F DA+ F +
Sbjct: 94 NVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESF--VS 151
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
M S + PN T CA+ + G G ++ + G + + G D ++ ++DM+ +CG
Sbjct: 152 MRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCG 211
Query: 300 SLKEARRAFD---------RNS----------------------KKRLTSWNSMINSFAL 328
++ A + F RNS ++ + SWN M+++ +
Sbjct: 212 AVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQ 271
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
G++ ++ V +M + +R D T+ S L AC + G+ +L + R P
Sbjct: 272 SGRAREALSVAVDM---HNRGVRLDSTTYTSSLTACAKLSSLGWGK---QLHAQVIRSLP 325
Query: 389 QIEHY--GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
I+ Y +V+L + G F+EA V ++ + + V W L+ G YG
Sbjct: 326 CIDPYVASAMVELYAKCGCFKEARRVFSSLR-DRNTVSWTVLIGGFLQYG 374
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 143/327 (43%), Gaps = 47/327 (14%)
Query: 11 TLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFD 70
++ ++++ +C + L+ +S +++ + + L + ++ N+ AR FD
Sbjct: 431 VISNSLISMYAKCGN---LQNAESIFSSMEERDIVSWTGMLTAYS--QVGNIGKAREFFD 485
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
++T N + AM+ AY A +Y M+ P+ Y + + C D+ +
Sbjct: 486 GMSTRNVITWNAMLGAYIQHGAE-EDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGAN 544
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
+ + VK G V A++ YS+ G I ARK+FD +S +++VSW AMI+G
Sbjct: 545 KLGDQITGHTVKVGLILDTSVMNAVITMYSKCGR-ISEARKIFDFLSRKDLVSWNAMITG 603
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y++ G K A +FD M + G D IS+
Sbjct: 604 YSQHGMGKQAIEIFDDM---------------LKKGAKPDYISY---------------- 632
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRN---GLDLDSFISNALIDMYGKCGSLKEARRA 307
V LS+ H+G++Q GK + R+ L+ F + ++D+ + G+L EA+
Sbjct: 633 ---VAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHF--SCMVDLLARAGNLIEAKNL 687
Query: 308 FDRNSKKRLTS-WNSMINSFALHGQSE 333
D K W +++++ HG +E
Sbjct: 688 IDEMPMKPTAEVWGALLSACKTHGNNE 714
>gi|218189919|gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
Length = 545
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 178/516 (34%), Positives = 278/516 (53%), Gaps = 27/516 (5%)
Query: 19 ILERCNHINHLKQLQSFLTTLG-QSQTNFYAFKLVRFCTLKLSNLTYARF--------IF 69
+L +C I L+++ + T G + K+ R +YA F +F
Sbjct: 26 LLTQCKTIRELQRIHAQALTHGLHPNQQSISCKIFR---------SYAEFGRPADAGRLF 76
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
D + P+ +T++++ + + H A S++ + G +P+ F L + + +
Sbjct: 77 DEIPHPDIISFTSLMSLHL-KLDHHWKAISVFSHAIASGH-RPDGFAAVGALSASGGLGD 134
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
R +VH I + G + VV ALV+ Y R G AR +FD M ++ V+W +M+
Sbjct: 135 QRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGK-FEPARTVFDRMLVKDEVTWGSMLY 193
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GY + + +A S F MP + +W ++I G Q+ A+ F +M +E RPN
Sbjct: 194 GYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLE---GHRPN 250
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+T+V LSA G L LG+ IHGY ++ + ++NAL+DMY K GS+ A F+
Sbjct: 251 HITIVGVLSACADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFE 310
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
K +W +MI+SF + G ++ +F +M+R I P+ VTF+S+L+AC+H GL
Sbjct: 311 EVQMKDAFTWTTMISSFTVQGNGRKAVELFWDMLRS---GILPNSVTFVSVLSACSHAGL 367
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
+++GR F M + Y I+P++EHYGC+VDLLGR G EEA ++ M +EPD V+W SLL
Sbjct: 368 IQEGRELFDKMREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLL 427
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
+ C +G AE A K++I+ +P + G ++L N+Y +W E +RK + R YK
Sbjct: 428 SACLAHGNDRLAEIAGKEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYK 487
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PGCSWIEVD VH+F DK+H EIY LE M
Sbjct: 488 KPGCSWIEVDGVVHEFLVEDKSHDARREIYVTLEIM 523
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 150/350 (42%), Positives = 230/350 (65%), Gaps = 6/350 (1%)
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
M ++++VS TAMI+ Y + G I A LFD + +RD WN +I G Q+GL ++ + F
Sbjct: 1 MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
R+M ++ +RPN+VT++ LSA G TG L+ G+ +H Y+ NG+ ++ + +LIDMY
Sbjct: 61 RQM---LNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMY 117
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCGSL++AR F+R S K + +WNSM+ +A+HG S++++ +F+EM +P +
Sbjct: 118 SKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMI---GYQPTDI 174
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TFI +LNAC+H GLV +G +F M Y IEP++EHYGC+V+LLGRAG EEA E+VK
Sbjct: 175 TFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKN 234
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M+I+ D V+WG+LL C+++G E + L+ + N G ++L+NIY G W+ V
Sbjct: 235 MEIDQDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGV 294
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+VR ++K+ K PGCS IEV+ +VH+F + D HP++ EIY+ LE +
Sbjct: 295 ARVRTLMKESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEI 344
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 11/218 (5%)
Query: 55 CTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQ 114
C K + AR +FD L + + MI YA Q + L+R M+ + +PN+
Sbjct: 15 CYAKYGMIDEARVLFDGLEERDAICWNVMIDGYA-QHGLPNEGLLLFRQMLN-AKVRPNE 72
Query: 115 FIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
VL +C + VH+ I +G V T+L++ YS+ G+ + AR +F+
Sbjct: 73 VTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGS-LEDARLVFE 131
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM-----PDRDVPAWNSVIAGCTQNGLFS 229
+S+++VV+W +M+ GY G ++A LF M D+ + V+ C+ GL S
Sbjct: 132 RISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDI-TFIGVLNACSHAGLVS 190
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
+ FF M E I P C ++ +G G L+
Sbjct: 191 EGWKFFYSMKDEYG--IEPKVEHYGCMVNLLGRAGYLE 226
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 293/526 (55%), Gaps = 47/526 (8%)
Query: 4 VTNQLNQTLNQQVLAILERCNHINHLKQ---LQSFLTTLGQSQTNFYAFKLVRFCTLKLS 60
++ + N T + L IL C N L Q L L G Q F A KL+ + +L
Sbjct: 70 LSQEPNPTQHTYELLILS-CTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYS-ELD 127
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
++ AR +FD Y++ A+ A + + LYR M R G P ++F Y +V
Sbjct: 128 SIDNARKVFDKTRKRTIYVWNALFRAL-TLAGYGREVLDLYRRMNRIGVPS-DRFTYTYV 185
Query: 121 LKSCPD----VLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
LK+C V + +H I++ GFE + + T L++ Y+R
Sbjct: 186 LKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYAR--------------- 230
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
G + NA+ +FD MP ++V +W+++IA ++NG +A+ FR
Sbjct: 231 -----------------FGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFR 273
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+M +E D + PN VT+V L A L+ GK++HGY+ R GLD + +AL+ +Y
Sbjct: 274 KMMLENQD-LLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYA 332
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
+CG+L+ R F+R K+ + SWNS+I+S+ +HG +I +F+EM+ D + P ++
Sbjct: 333 RCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMI---DQGLSPSPIS 389
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
F+S+L AC+H GLVE+G+ F+ M + ++I P +EHY C+VDLLGRA R +EA +++ M
Sbjct: 390 FVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDM 449
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
+IEP VWGSLL C+I+ + AE A +L E++P N G ++LA+IY E W+EV+
Sbjct: 450 RIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVK 509
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+V+ +L+ R K PG S IE+ ++++ F S+D+ +P+ E+++ L
Sbjct: 510 RVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALL 555
>gi|26451823|dbj|BAC43004.1| unknown protein [Arabidopsis thaliana]
gi|28950761|gb|AAO63304.1| At1g33350 [Arabidopsis thaliana]
gi|62321411|dbj|BAD94775.1| hypothetical protein [Arabidopsis thaliana]
Length = 219
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 141/217 (64%), Positives = 177/217 (81%)
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
SKK LT+WNSMIN FALHG+SE +I VFEEMM+ ++I+PD +TFI LLNACTHGGLV
Sbjct: 3 SKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVS 62
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+GR YF LMT + IEP+IEHYGCL+DLLGRAGRF+EALEV+ MK++ DE +WGSLLN
Sbjct: 63 KGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNA 122
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
CKI+G D AE AVK L+ ++PNNGGY M+AN+YGE+G W+E R+ RKM+K +NAYK P
Sbjct: 123 CKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPP 182
Query: 492 GCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
G S IE+D +VHQF+SLDK+HP TEEIY L+S+++
Sbjct: 183 GWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLISF 219
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
+ + AWNS+I +G +AI+ F M ++I+P+ +T + L+A H G++ G
Sbjct: 5 KSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKG 64
Query: 270 KVIHGY--VYRNGLDLDSFISN--ALIDMYGKCGSLKEARRAFDRNSKKRLTS-WNSMIN 324
+ GY + N ++ I + LID+ G+ G EA K + W S++N
Sbjct: 65 R---GYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLN 121
Query: 325 SFALHGQ 331
+ +HG
Sbjct: 122 ACKIHGH 128
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 192/614 (31%), Positives = 302/614 (49%), Gaps = 118/614 (19%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFD 70
N L++L C + L+ + + + G TN+ KL+ FC L L YA +F+
Sbjct: 2 NHPSLSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFE 61
Query: 71 HLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYP---------- 118
+ PN ++ M +A S P SA LY M+ G PN + +P
Sbjct: 62 TIQEPNLLIWNTMFRGHALSSDPV---SALYLYVCMISLGL-LPNCYTFPFLLKSCAKSK 117
Query: 119 ----------HVLKSCPDVLESRGTKMV--------------------HTQIV------- 141
HVLK D+ T ++ H +V
Sbjct: 118 AFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIT 177
Query: 142 -----------KSGFEQYPVVET----ALVNSYSRSGNDIGIARKLFDEMSD-------- 178
+ F++ P+ + A+++ Y+ +GN+ A +LF EM
Sbjct: 178 GYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNN-KEALELFKEMMKTNVRPDES 236
Query: 179 ------------------RNVVSW-------------TAMISGYTRVGDIKNAASLFDSM 207
R V SW A+I Y + G+++ A LF+ +
Sbjct: 237 TMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGL 296
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
+DV +WN++I G T L+ +A+ F+ M + PN VT++ L A H G ++
Sbjct: 297 SYKDVISWNTLIGGYTHMNLYKEALLLFQEM---LRSGESPNDVTMLSILPACAHLGAIE 353
Query: 268 LGKVIHGYVYR--NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
+G+ IH Y+ + G+ S +LIDMY KCG ++ A++ FD + L+SWN+MI
Sbjct: 354 IGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFG 413
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
FA+HG++ + +F M + + I PD +TF+ LL+AC+H G+++ GR F+ M + Y+
Sbjct: 414 FAMHGRANAAFDIFSRMRK---NEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYK 470
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
I P++EHYGC++DLLG +G F+EA E++ M++EPD V+W SLL CK+Y + E
Sbjct: 471 ITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYA 530
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
+ LI+I+P N G ++L+NIY G+W+EV K+R +L D+ K PGCS IE+D VH+F
Sbjct: 531 QNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEF 590
Query: 506 HSLDKTHPRTEEIY 519
DK HPR EIY
Sbjct: 591 IIGDKFHPRNREIY 604
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 168/488 (34%), Positives = 271/488 (55%), Gaps = 10/488 (2%)
Query: 39 LGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAF 98
LG S F + F +++ + +AR +FD + + +I Y + A
Sbjct: 150 LGFSADVFVVNAAMHFWSVR-GPMAFARRLFDESPVRDVVSWNTLIGGYV-RSGLPREAL 207
Query: 99 SLYRDMVRRGQP-QPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVN 157
L+ + G +P++ + C + + K +H + G + A+++
Sbjct: 208 ELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMD 267
Query: 158 SYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNS 217
Y + G+ + +A +F+ +S+R VSWT MI G+ R+G +++A LFD MP+RDV WN+
Sbjct: 268 MYVKCGS-LELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNA 326
Query: 218 VIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVY 277
++AG QN +AI+ F M + PN++T+V LSA G L++G +H Y+
Sbjct: 327 LMAGYVQNKQGKEAIALFHEMQ---KSKVDPNEITMVNLLSACSQLGALEMGMWVHHYID 383
Query: 278 RNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSIC 337
R+ L L + +L+DMY KCG++K+A F+ + +W SMI A HG ++ +I
Sbjct: 384 RHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIE 443
Query: 338 VFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLV 397
F+ M+ D ++PD +TFI +L+AC H GLVE GR +F LM Y +E +++HY C++
Sbjct: 444 YFQRMI---DLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMI 500
Query: 398 DLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGG 457
DLLGRAG +EA ++V M ++PD VVWG+L C+++G E A KL+E+DP++ G
Sbjct: 501 DLLGRAGHLDEAEQLVNAMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSG 560
Query: 458 YGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEE 517
++LAN+Y E + KVR M++ K PGCS IE++ VH+F DK+H T
Sbjct: 561 IYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTNA 620
Query: 518 IYDALESM 525
IYD L +
Sbjct: 621 IYDCLHEI 628
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 187/423 (44%), Gaps = 68/423 (16%)
Query: 62 LTYARFIFDHLTTP--NTYLYTAMITAYASQPAHA---SSAFSLYRDMVRRGQPQPNQFI 116
L +A I L +P + + Y A A + P LYR ++ G +P+
Sbjct: 64 LLHALAILASLPSPPDSAFPYNAAFRALSLCPHQHLVDRHCLPLYRALLHSGSARPDHLT 123
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+P ++K+C + V + K GF V A ++ +S G + AR+LFDE
Sbjct: 124 FPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMHFWSVRG-PMAFARRLFDES 182
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
R+VVSW +I GY R +GL +A+ F
Sbjct: 183 PVRDVVSWNTLIGGYVR-------------------------------SGLPREALELFW 211
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
R+ E + +RP++VT++ A+S G L+LGK +H +V G+ + NA++DMY
Sbjct: 212 RLA-EDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYV 270
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM-------------- 342
KCGSL+ A F+R S + SW +MI A G E++ +F+EM
Sbjct: 271 KCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAG 330
Query: 343 --------------MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
Q + P+ +T ++LL+AC+ G +E G + + +++
Sbjct: 331 YVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDR-HKLHL 389
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL 448
+ LVD+ + G ++A+ V + ++ + + W S++ G +G D A +++
Sbjct: 390 SVALGTSLVDMYAKCGNIKKAICVFNEIPVQ-NALTWTSMICGLANHGHADEAIEYFQRM 448
Query: 449 IEI 451
I++
Sbjct: 449 IDL 451
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 5/211 (2%)
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
S + RP+ +T + A G + G+V + G D F+ NA + + G +
Sbjct: 114 SGSARPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMHFWSVRGPMA 173
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN-IRPDGVTFISLL 361
ARR FD + + + SWN++I + G ++ +F + +D N +RPD VT I +
Sbjct: 174 FARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRL--AEDGNAVRPDEVTVIGAV 231
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
+ C G +E G+ + + + + ++D+ + G E A V + +
Sbjct: 232 SGCAQMGDLELGKRLHEFVDNK-GVRCTVRLMNAVMDMYVKCGSLELANSVFERIS-NRT 289
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
V W +++ G G + A ++ E D
Sbjct: 290 AVSWTTMIVGHARLGMMEDARMLFDEMPERD 320
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 173/518 (33%), Positives = 277/518 (53%), Gaps = 50/518 (9%)
Query: 19 ILERCNHINHLKQLQSFL--TTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPN 76
+L+ C+ ++ LKQL +F TT + + + + + S++ YA +FD + +
Sbjct: 31 VLQTCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHS 90
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
++++ +I A A + AF LYR M+ RG+ P++ +P VLK+C + K V
Sbjct: 91 SFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQV 150
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGD 196
H QIVK GF V L++ Y G + +ARK+FDE
Sbjct: 151 HCQIVKHGFGGDVYVNNGLIHLYGSCGC-LDLARKVFDE--------------------- 188
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
MP+R + +WNS+I + G + A+ FR E+ + P+ T+
Sbjct: 189 ----------MPERSLVSWNSMIDALVRFGEYDSALQLFR----EMQRSFEPDGYTMQSV 234
Query: 257 LSAIGHTGMLQLGKVIHGYVYRN---GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
LSA G L LG H ++ R + +D + N+LI+MY KCGSL+ A + F K
Sbjct: 235 LSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQK 294
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ L SWN+MI FA HG++E ++ F+ M+ + N+RP+ VTF+ LL AC H G V +G
Sbjct: 295 RDLASWNAMILGFATHGRAEEAMNFFDRMVD-KRENVRPNSVTFVGLLIACNHRGFVNKG 353
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
R YF +M + Y IEP +EHYGC+VDL+ RAG EA+++V M ++PD V+W SLL+ C
Sbjct: 354 RQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACC 413
Query: 434 IYGRT-DFAEFAVKKLIEIDPNN-------GGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
G + + +E + +I +N G ++L+ +Y +W++V VRK++ +
Sbjct: 414 KKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEH 473
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K PGCS IE++ H+F + D +HP+T++IY L+
Sbjct: 474 GIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLK 511
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 173/500 (34%), Positives = 271/500 (54%), Gaps = 42/500 (8%)
Query: 29 LKQLQSFLTT--LGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTPNTYLYTAMIT 85
L+QL + + T L S F K+V FC L N+ YAR +F + PN + + ++I
Sbjct: 4 LRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNSLIK 63
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
Y+ + L++ + G P PN F VLK+C V VH+ ++K GF
Sbjct: 64 GYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKDGF 123
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
V+T+LVN Y + +IG ARK+ F+
Sbjct: 124 GSSLFVQTSLVNFYGKC-EEIGFARKV-------------------------------FE 151
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
MP R++ AW ++I+G + G +A+ FR M I+P+ +TLV +SA G
Sbjct: 152 EMPVRNLVAWTAMISGHARVGAVDEAMELFREMQ---KAGIQPDAMTLVSVVSACAVAGA 208
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L +G +H Y+ + + D +S AL+DMY KCG ++ A++ F K T+W+SMI
Sbjct: 209 LDIGYWLHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMG 268
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
FA HG ++++I F++M+ + + PD VTF+++L+AC HGGLV +GR ++ LM + +
Sbjct: 269 FAYHGLAQDAIDAFQQMLETE---VTPDHVTFLAVLSACAHGGLVSRGRRFWSLMLE-FG 324
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
IEP +EHYGC VDLL R+G EEA + MKI P+ W SLL GCK + E
Sbjct: 325 IEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKLLNLGEIVA 384
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
+ L+E++P N IM++N+Y L +W+++ ++RK++K++ PGCS IEVD VH+F
Sbjct: 385 RYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEF 444
Query: 506 HSLDKTHPRTEEIYDALESM 525
D++HP + + + +E M
Sbjct: 445 VMGDQSHPEVKMLREFMEEM 464
>gi|357131180|ref|XP_003567218.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Brachypodium distachyon]
Length = 474
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 164/441 (37%), Positives = 267/441 (60%), Gaps = 15/441 (3%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
L++ + A +FD TP + A++ AY+ P A +L+RD R F+
Sbjct: 44 LQIHSQLVAHQVFDRRPTP----WHALLKAYSHGP-FPQEALNLFRDAHRNMADDTYAFM 98
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ L++C + +H +++ GFE + V T+L+N+Y G + AR FDEM
Sbjct: 99 FS--LRACAGLAWPWTGAQLHGLVIRKGFEFHAYVHTSLINTYVVCGCLVD-ARMAFDEM 155
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+NVVSW MI+G+ G+I+ A LF+ MP R+V +W +I G T++ +A++ R
Sbjct: 156 PVKNVVSWNVMITGFAGRGEIEYARLLFERMPSRNVVSWTGLIDGYTRSCHSVEAVALLR 215
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
RM +++ I P ++T++ + AI G + +G+ +HGY +NGL LD + N+LID+Y
Sbjct: 216 RM---MAEGISPTEITVLAVVPAISDIGRILMGETLHGYCEKNGLVLDIRVGNSLIDLYA 272
Query: 297 KCGSLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
K GS++ + + F +R L SW S+I+ FA+HG S ++ +F EM R IRP+ V
Sbjct: 273 KIGSIQSSLKVFHGMLNRRNLVSWTSIISGFAMHGLSTEAVELFAEMRRS---GIRPNRV 329
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF+S+LNAC+HGGLVEQG +FK M Y I P+I+H+GC++D+LGRAGR EA +V+ G
Sbjct: 330 TFLSVLNACSHGGLVEQGVEFFKSMVYEYNINPEIKHFGCIIDMLGRAGRLCEAEQVIGG 389
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
+ +E + +VW +LL C YG + + A+KK++ + +GG ++++N+ ELG++ +
Sbjct: 390 LPMEVNSIVWRTLLACCSKYGEVEMGKRAMKKILHTERESGGDFVVVSNMLTELGRFSDA 449
Query: 476 RKVRKMLKDRNAYKTPGCSWI 496
+ RK+L +RNA K PG + +
Sbjct: 450 ERSRKLLDERNAVKVPGLALV 470
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 254/449 (56%), Gaps = 9/449 (2%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
L L+ A +F+ + + +MIT + A A +Y++M + +PN+
Sbjct: 204 LSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKR-GLAIEAIKIYKEM-EAEKVRPNEIT 261
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
++ SC V + K H I + G E + AL++ Y + G ++ AR LFD M
Sbjct: 262 MIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCG-ELLTARVLFDNM 320
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+ + +VSWT M+ GY R G + A + +P++ V WN++I+GC Q +A++ F
Sbjct: 321 AQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFH 380
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M + I P++VT+V LSA G L +G IH Y+ R+ L +D + AL+DMY
Sbjct: 381 EMQIR---TIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYA 437
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG++ A + F+ ++ +W ++I ALHG +++++ F +M+ I PD +T
Sbjct: 438 KCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHI---GIVPDEIT 494
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
F+ +L+AC HGGLVE+GR YF M+ + + P+++HY C+VDLLGRAG EEA E+VK M
Sbjct: 495 FLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNM 554
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
+ D V G+L C++YG E KL+EIDP + G ++LA++Y E W E R
Sbjct: 555 PMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEAR 614
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
RK++ D+ KTPGCS +E++ VH+F
Sbjct: 615 SARKLMNDKGVEKTPGCSLVEINGIVHEF 643
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 222/497 (44%), Gaps = 78/497 (15%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARFIFDHLTT 74
+L+ILERC + LKQ+Q+ + + G + F A +LV FC L S L Y I +
Sbjct: 60 LLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKE 119
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
N + + A I Y + F LY+ M+ G +P+ YP +LK C S
Sbjct: 120 LNVFSWNAAIRGYV-ESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGL 178
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
V ++K GFE V A S T ++S
Sbjct: 179 GVLGHVLKFGFECDIFVHNA----------------------------SITMLLS----C 206
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G++ A +F+ RD+ WNS+I GC + GL +AI ++ M E +RPN++T++
Sbjct: 207 GELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAE---KVRPNEITMI 263
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
+S+ L LGK H Y+ +GL+ ++NAL+DMY KCG L AR FD ++K
Sbjct: 264 GMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQK 323
Query: 315 RLTSWNSMINSFALHG-------------------------------QSENSICVFEEMM 343
L SW +M+ +A G Q + ++ +F EM
Sbjct: 324 TLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEM- 382
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
Q I PD VT ++ L+AC+ G ++ G + + +++ + LVD+ +
Sbjct: 383 --QIRTIEPDKVTMVNCLSACSQLGALDVG-IWIHHYIERHKLSIDVALGTALVDMYAKC 439
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID--PNNGGY-GI 460
G AL+V + + + + + W +++ G ++G A K+I I P+ + G+
Sbjct: 440 GNIARALQVFEEIP-QRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGV 498
Query: 461 MLANIYGELGKWDEVRK 477
+ A +G G +E RK
Sbjct: 499 LSACCHG--GLVEEGRK 513
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 174/475 (36%), Positives = 265/475 (55%), Gaps = 45/475 (9%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM------VRRGQPQ 111
K L AR +FD + N +T+MIT Y Q A +A L++D V G
Sbjct: 1189 KCGQLKDARALFDEIPLRNVVSWTSMITGYV-QNEQADNALLLFKDFLEEETEVEDGNNV 1247
Query: 112 P-NQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIAR 170
P + + VL +C V T+ VH +VK GF+ V L+++Y++ G + +++
Sbjct: 1248 PLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPL-VSK 1306
Query: 171 KLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSD 230
K+FD W M ++D +WNS+IA Q+GL +
Sbjct: 1307 KVFD---------W----------------------MEEKDDISWNSMIAVYAQSGLSGE 1335
Query: 231 AISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNA 290
A+ F M V +R N VTL L A H G L+ GK IH V + L+ + + +
Sbjct: 1336 ALEVFHGMVRHV--GVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTS 1393
Query: 291 LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
+IDMY KCG ++ A++ FDR +K + SW +M+ + +HG+++ ++ +F +M+R +
Sbjct: 1394 IIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRA---GV 1450
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
+P+ +TF+S+L AC+H GLVE+G +F M Y IEP IEHYGC+VDL GRAG EA
Sbjct: 1451 KPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAY 1510
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELG 470
++K MK++PD VVWGSLL C+I+ D E A +KL E+DP+N GY ++L+N+Y + G
Sbjct: 1511 NLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAG 1570
Query: 471 KWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+W +V ++R ++K+R K PG S +E+ +VH F DK HP E IY LE +
Sbjct: 1571 RWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKL 1625
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 225/401 (56%), Gaps = 10/401 (2%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
++ L +L+ C + HL+Q+ + + G S KL+ + + YA +F +
Sbjct: 28 KKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTH-GRIAYAILLFYQIQ 86
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
P T+ + +I A + A LY++MV +G ++F +P V+K+C + L
Sbjct: 87 NPCTFTWNLIIRANTIN-GLSEQALMLYKNMVCQGIAA-DKFTFPFVIKACTNFLSIDLG 144
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
K+VH ++K GF V+ L++ Y + G+ A K+F++M RNVVSWT +ISG
Sbjct: 145 KVVHGSLIKYGFSGDVFVQNNLIDFYFKCGH-TRFALKVFEKMRVRNVVSWTTVISGLIS 203
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
GD++ A +FD +P ++V +W ++I G +N +A+ F+RM E NI PN+ T+
Sbjct: 204 CGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAE---NIFPNEYTM 260
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
V + A G+L LG+ IH Y +N +++ ++ ALIDMY KCGS+K+A F+ +
Sbjct: 261 VSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPR 320
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K L +WNSMI S +HG + ++ +F EM R N++PD +TFI +L AC H V++G
Sbjct: 321 KSLPTWNSMITSLGVHGLGQEALNLFSEMERV---NVKPDAITFIGVLCACVHIKNVKEG 377
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
AYF MT+ Y I P EHY C+ +L R+ +EA + K
Sbjct: 378 CAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTK 418
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 123/281 (43%), Gaps = 39/281 (13%)
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
+I Y+ G I A LF + + WN +I T NGL A+ ++ M V I
Sbjct: 65 LIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNM---VCQGI 121
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG------- 299
++ T + A + + LGKV+HG + + G D F+ N LID Y KCG
Sbjct: 122 AADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALK 181
Query: 300 ------------------------SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
L+EARR FD K + SW +MIN + + Q E +
Sbjct: 182 VFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEA 241
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ +F+ M Q NI P+ T +SL+ ACT G++ GR K IE +
Sbjct: 242 LELFKRM---QAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNC-IEIGVYLGTA 297
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
L+D+ + G ++A+EV + M W S++ ++G
Sbjct: 298 LIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVHG 337
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 156/332 (46%), Gaps = 50/332 (15%)
Query: 199 NAASLFDSMPDR-DVPAWNSVIAGCTQNGLFSDAISFF---RRMGMEVSDNIRPNQVTLV 254
N A+ F D+ +V +WNSVIA + G +A+ F R++G+ P + +
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGL------IPTRSSFP 1146
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
C + + L G++ H + G + D F+S+ALIDMY KCG LK+AR FD +
Sbjct: 1147 CTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR 1206
Query: 315 RLTSWNSMINSFALHGQSENSICVF----EEMMRCQDHNIRP-DGVTFISLLNACT---- 365
+ SW SMI + + Q++N++ +F EE +D N P D V +S+L+AC+
Sbjct: 1207 NVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSG 1266
Query: 366 -------HGGLVEQG------------RAYFK----LMTKT---YRIEPQIEHYGCLVDL 399
HG +V++G AY K L++K + E + ++ +
Sbjct: 1267 KGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAV 1326
Query: 400 LGRAGRFEEALEVVKGM----KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPN- 454
++G EALEV GM + + V ++L C G + ++I++D
Sbjct: 1327 YAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEY 1386
Query: 455 NGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
N G + ++Y + G+ + +K +K++N
Sbjct: 1387 NVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKN 1418
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 30/200 (15%)
Query: 22 RCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYT 81
+C H +K + +G S + Y K + A+ FD + N +T
Sbjct: 1373 KCIHDQVIKMDLEYNVCVGTSIIDMYC---------KCGRVEMAKKTFDRMKEKNVKSWT 1423
Query: 82 AMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV-LESRG----TKMV 136
AM+ Y A A ++ MVR G +PN + VL +C L G M
Sbjct: 1424 AMVAGYGMH-GRAKEALDIFYKMVRAGV-KPNYITFVSVLAACSHAGLVEEGWHWFNAMK 1481
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR-NVVSWTAMISGYTRV- 194
H ++ G E Y +V+ + R+G + A L M + + V W +++ G R+
Sbjct: 1482 HKYDIEPGIEHY----GCMVDLFGRAGC-LNEAYNLIKRMKMKPDFVVWGSLL-GACRIH 1535
Query: 195 -----GDIKNAASLFDSMPD 209
G+I A LF+ PD
Sbjct: 1536 KNVDLGEIA-AQKLFELDPD 1554
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 184/578 (31%), Positives = 283/578 (48%), Gaps = 77/578 (13%)
Query: 19 ILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L+RC L KQ+ + + + N + + ++ L AR +FD L
Sbjct: 34 VLKRCLKQKDLMAAKQVHDCIIK-SRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKK 92
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ + AMI Y HA A L+R+M G QPN Y +LK+C + + K
Sbjct: 93 SGASWNAMIAGYVEHK-HAEDAMRLFREMCHEG-VQPNAGTYMIILKACASLSALKWGKE 150
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
VH I G E V TAL+ Y + G+ I AR++FD + + +++SWT MI Y + G
Sbjct: 151 VHACIRHGGLESDVRVGTALLRMYGKCGS-INEARRIFDNLMNHDIISWTVMIGAYAQSG 209
Query: 196 DIKNAASL---------------------------------------FDSMPDRDVPAWN 216
+ K A L D+ + DV
Sbjct: 210 NGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGT 269
Query: 217 SVIAGCTQNGLFSDAISFFRRM--------------------GMEVSD--------NIRP 248
+++ ++G DA F RM G E D +P
Sbjct: 270 ALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKP 329
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
+ + + L+A G L+ K IH + +GL++D + AL+ MY K GS+ +AR F
Sbjct: 330 DAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVF 389
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
DR + + SWN+MI+ A HG ++++ VF M H ++PD VTF+++L+AC+H G
Sbjct: 390 DRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRM---TAHGVKPDRVTFVAVLSACSHAG 446
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
LV++GR+ + MT+ Y IEP + H C+VDLLGRAGR EA + M ++PDE WG+L
Sbjct: 447 LVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGAL 506
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L C+ YG + E K+ +++DP N ++L+NIY E GKWD V VR M+++R
Sbjct: 507 LGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIR 566
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K PG SWIEVD ++H F D +HP +EI ++ + ++
Sbjct: 567 KEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVI 604
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 182/429 (42%), Gaps = 79/429 (18%)
Query: 95 SSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETA 154
S A + + ++RG + F+Y VLK C + K VH I+KS EQ V
Sbjct: 10 SEAIVVLMNRLQRGLI-TDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNN 68
Query: 155 LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA 214
L++ Y G ++ A +FD++ + +
Sbjct: 69 LLHVY--------------------------------IECGRLQEARCVFDALVKKSGAS 96
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
WN++IAG ++ DA+ FR M E ++PN T + L A L+ GK +H
Sbjct: 97 WNAMIAGYVEHKHAEDAMRLFREMCHE---GVQPNAGTYMIILKACASLSALKWGKEVHA 153
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
+ GL+ D + AL+ MYGKCGS+ EARR FD + SW MI ++A QS N
Sbjct: 154 CIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYA---QSGN 210
Query: 335 SICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL-------------------VEQGRA 375
+ M++ + +P+ +T++S+LNAC G V G A
Sbjct: 211 GKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTA 270
Query: 376 YFKLMTKTYRIEP-----------QIEHYGCLVDLLGRAGRFEEALEVVKGMKIE---PD 421
++ K+ I+ + + ++ GR EA ++ M+ E PD
Sbjct: 271 LVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPD 330
Query: 422 EVVWGSLLNGCKIYGRTDFAE----FAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+++ S+LN C G ++ + A+ +E+D G L ++Y + G D+ R
Sbjct: 331 AIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVR---VGTALVHMYSKSGSIDDARV 387
Query: 478 VRKMLKDRN 486
V +K RN
Sbjct: 388 VFDRMKVRN 396
>gi|347954492|gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 180/480 (37%), Positives = 270/480 (56%), Gaps = 21/480 (4%)
Query: 52 VRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQ 109
V F T + S+ + T+ T +T+ IT + + A A+ FS +R
Sbjct: 5 VPFVTRQKSSQIQRILKLNQSTSETTVSWTSRITLLSRNGRLAEAAKEFS----SMRLAG 60
Query: 110 PQPNQFIYPHVLKSCPDVLESRGTK----MVHTQIVKSGFEQYPV-VETALVNSYSRSGN 164
+PN + +L C DV S G++ ++H K G ++ V V TA++ YS+ G
Sbjct: 61 VEPNHITFIALLSGCGDV--SSGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGR 118
Query: 165 DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQ 224
G AR +FD M D+N V+W MI GY R G + NA LFD MP+RD+ +W ++I G +
Sbjct: 119 -FGKARLVFDFMEDKNSVTWNTMIDGYMRSGQVNNAVKLFDEMPERDLISWTAMINGFVK 177
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
G +A+++FR M + ++P+ V ++ AL+A H G L G +H YV +
Sbjct: 178 KGFHEEALAWFREMQIS---GVKPDYVAIIAALAACTHLGALSFGLWVHRYVMNQDFKNN 234
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
+SN+LID+Y +CG ++ AR FD+ K+ + SWNS+I FA +G + S+ F +M
Sbjct: 235 IRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM-- 292
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
Q+ +PD VTF L AC+H GLVE+G YF+ M + +RI P+IEHYGCLVDL RAG
Sbjct: 293 -QEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAG 351
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG-RTDFAEFAVKKLIEIDPNNGGYGIMLA 463
R E+AL VV+ M ++P+EVV GSLL C+ +G T AE VK L +++ + ++L+
Sbjct: 352 RLEDALNVVQSMPMKPNEVVIGSLLAACRNHGNNTVLAERLVKHLSDLNVKSHSNYVILS 411
Query: 464 NIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
N+Y G W+ K+R+ +K K PG S +E+D H F + D H T I + LE
Sbjct: 412 NMYAADGIWEGASKMRRKMKGLGLKKQPGFSSVEIDDCTHVFMAGDSAHVETAYIREVLE 471
>gi|7362769|emb|CAB83139.1| putative protein [Arabidopsis thaliana]
Length = 558
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 170/473 (35%), Positives = 276/473 (58%), Gaps = 25/473 (5%)
Query: 62 LTYARFIFD--HLTTPNTYLYTAMITAYA---SQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+ YA IF HL ++L+ +I A S P S S+Y M R + P+
Sbjct: 8 IAYANPIFHIRHLKL-ESFLWNIIIRAIVHNVSSP-QRHSPISVYLRM-RNHRVSPDFHT 64
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+P +L S + L + H QI+ G ++ P V T+L+N YS G D+ A+++FD+
Sbjct: 65 FPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCG-DLRSAQRVFDDS 123
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+++ +W ++++ Y + G I +A LFD MP+R+V +W+ +I G G + +A+ FR
Sbjct: 124 GSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFR 183
Query: 237 RMGMEVSDN--IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
M + + +RPN+ T+ LSA G G L+ GK +H Y+ + +++D + ALIDM
Sbjct: 184 EMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDM 243
Query: 295 YGKCGSLKEARRAFDR-NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
Y KCGSL+ A+R F+ SKK + ++++MI A++G ++ +F EM NI P+
Sbjct: 244 YAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMT--TSDNINPN 301
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
VTF+ +L AC H GL+ +G++YFK+M + + I P I+HYGC+VDL GR+G +EA +
Sbjct: 302 SVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFI 361
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
M +EPD ++WGSLL+G ++ G E A+K+LIE+DP N G ++L+N+Y + G+W
Sbjct: 362 ASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWM 421
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
E K PGCS++EV+ VH+F D++ +E IY L+ ++
Sbjct: 422 E-----------GINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIM 463
>gi|334182333|ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity to an unknown protein T5J8.5 gi|4263522 from
Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains
multiple PPR PF|01535 repeats. ESTs gb|AV565358,
gb|AV558710, gb|AV524184 come from this gene [Arabidopsis
thaliana]
gi|332189826|gb|AEE27947.1| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
Length = 1322
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 174/532 (32%), Positives = 291/532 (54%), Gaps = 44/532 (8%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTY 78
I+++C+ L+ + + +Q + + CT L A + PN +
Sbjct: 779 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACT-SFKRLDLAVSTMTQMQEPNVF 837
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHT 138
+Y A+ + + +H + LY M+R P+ + Y ++K+ SR + +
Sbjct: 838 VYNALFKGFVT-CSHPIRSLELYVRMLR-DSVSPSSYTYSSLVKASS--FASRFGESLQA 893
Query: 139 QIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV---- 194
I K GF + ++T L++ YS +G I ARK+FDEM +R+ ++WT M+S Y RV
Sbjct: 894 HIWKFGFGFHVKIQTTLIDFYSATGR-IREARKVFDEMPERDDIAWTTMVSAYRRVLDMD 952
Query: 195 ---------------------------GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGL 227
G+++ A SLF+ MP +D+ +W ++I G +QN
Sbjct: 953 SANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKR 1012
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
+ +AI+ F +M + + I P++VT+ +SA H G+L++GK +H Y +NG LD +I
Sbjct: 1013 YREAIAVFYKM---MEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYI 1069
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
+AL+DMY KCGSL+ A F KK L WNS+I A HG ++ ++ +F +M +
Sbjct: 1070 GSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKM---EM 1126
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE 407
+++P+ VTF+S+ ACTH GLV++GR ++ M Y I +EHYG +V L +AG
Sbjct: 1127 ESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIY 1186
Query: 408 EALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYG 467
EALE++ M+ EP+ V+WG+LL+GC+I+ AE A KL+ ++P N GY +L ++Y
Sbjct: 1187 EALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYA 1246
Query: 468 ELGKWDEVRKVRKMLKDRNAYKT-PGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
E +W +V ++R +++ K PG S I +DK+ H F + DK+H ++E+
Sbjct: 1247 EQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEV 1298
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 167/464 (35%), Positives = 264/464 (56%), Gaps = 39/464 (8%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR FD + PN + TAM + Y + L+R M+ V S
Sbjct: 3 ARRAFDEIPDPNPVIVTAMASGYVRNNL-VYHSLELFRAMIASDSASVVDEAAALVAFSA 61
Query: 125 PDVLESRG-TKMVHTQIVKSGFEQYPVVETALVNSYSRSGN-DIGIARKLFDEMSDRNVV 182
+ RG T +H I K GFE+ V +++SY++ G+ D+ +ARK+
Sbjct: 62 SARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKV---------- 111
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
FD+M +RDV +WNS+IA QNG+ ++AI + +M + V
Sbjct: 112 ---------------------FDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKM-LNV 148
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
I+ N V L L A H G +Q GK IH V R GL+ + ++ +++DMY KCG ++
Sbjct: 149 GGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVE 208
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
A RAF + +K + SW++MI + +HG+ + ++ +F EM R +RP+ +TFIS+L
Sbjct: 209 MASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRS---GLRPNYITFISVLA 265
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H GL+++GR ++ M + + IE +EHYGC+VDLLGRAG +EA ++K MK++PD
Sbjct: 266 ACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDA 325
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
+WG+LL+ C+I+ + AE +VK+L E+D +N GY ++L+NIY E G W +V ++R ++
Sbjct: 326 AIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEAGMWKDVERIRLLV 385
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K R K PG S E+ +++ F+ DK+HP+ EIY LE ++
Sbjct: 386 KTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLL 429
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 143/323 (44%), Gaps = 42/323 (13%)
Query: 199 NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
+A FD +PD + ++ +G +N L ++ FR M S ++ LV A S
Sbjct: 2 DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALV-AFS 60
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS--LKEARRAFDRNSKKRL 316
A + +H + + G + ++ + N ++D Y K GS L+ AR+ FD ++ +
Sbjct: 61 ASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFD-TMERDV 119
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR-- 374
SWNSMI +A +G S +I ++ +M+ I+ + V ++L AC H G ++ G+
Sbjct: 120 VSWNSMIALYAQNGMSAEAIGLYSKMLNVGG-GIKCNAVALSAVLLACAHAGAIQTGKHI 178
Query: 375 -----------------AYFKLMTKTYRI-----------EPQIEHYGCLVDLLGRAGRF 406
+ + +K R+ E I + ++ G GR
Sbjct: 179 HNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRG 238
Query: 407 EEALEVVKGMK---IEPDEVVWGSLLNGCKIYGRTDFAEF---AVKKLIEIDPNNGGYGI 460
+EALE+ MK + P+ + + S+L C G D + A+K+ I+ YG
Sbjct: 239 QEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGC 298
Query: 461 MLANIYGELGKWDEVRKVRKMLK 483
M+ ++ G G DE + K +K
Sbjct: 299 MV-DLLGRAGCLDEAYSLIKEMK 320
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 145/333 (43%), Gaps = 51/333 (15%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP-QPNQFIYPH 119
+L AR +FD + + + +MI YA Q ++ A LY M+ G + N
Sbjct: 104 DLEVARKVFDTMER-DVVSWNSMIALYA-QNGMSAEAIGLYSKMLNVGGGIKCNAVALSA 161
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
VL +C + K +H Q+V+ G E+ V T++V+ YS+ G + +A + F ++ ++
Sbjct: 162 VLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGR-VEMASRAFRKIKEK 220
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
N++SW+AMI+GY G + A +F M +R G
Sbjct: 221 NILSWSAMITGYGMHGRGQEALEIFTEM----------------------------KRSG 252
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN-GLDLDSFISNALIDMYGKC 298
+ RPN +T + L+A H G+L G+ + + + G++ ++D+ G+
Sbjct: 253 L------RPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRA 306
Query: 299 GSLKEARRAF-DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
G L EA + K W +++++ +H E + + + N +
Sbjct: 307 GCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASN----SGYY 362
Query: 358 ISLLNACTHGGL---VEQGRAYFKLMTKTYRIE 387
+ L N G+ VE+ +L+ KT RIE
Sbjct: 363 VLLSNIYAEAGMWKDVER----IRLLVKTRRIE 391
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 256/461 (55%), Gaps = 19/461 (4%)
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
PN+ +T++++++A + L++ M RG + + VL C D+ E K
Sbjct: 231 PNSVTWTSLLSSHARCGLY-DETLELFKVMRTRGIEIGAEALAV-VLSVCADMAEVDWGK 288
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H +VK G+E Y V+ AL+ +Y + +G A K+F E+ ++N+VSW A+IS Y
Sbjct: 289 EIHGYVVKGGYEDYLFVKNALIGTYGKH-QHMGDAHKVFLEIKNKNLVSWNALISSYAES 347
Query: 195 GDIKNAASLFDSMPDRD----------VPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
G A + F M D V +W++VI+G G ++ FR+M +
Sbjct: 348 GLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQMQLA--- 404
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ N VT+ LS L LG+ +HGY RN + + + N LI+MY KCG KE
Sbjct: 405 KVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLINMYMKCGDFKEG 464
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
FD + L SWNS+I + +HG EN++ F EM+R + ++PD +TF+++L+AC
Sbjct: 465 HLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRAR---MKPDNITFVAILSAC 521
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLV GR F M +RIEP +EHY C+VDLLGRAG +EA ++V+ M IEP+E V
Sbjct: 522 SHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIVRNMPIEPNEYV 581
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LLN C++Y D E +++ + G ++L+NIY G+WD+ +VR +
Sbjct: 582 WGALLNSCRMYKDMDIVEETASQILTLKSKITGSFMLLSNIYAANGRWDDSARVRVSART 641
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ K PG SWIEV K+V+ F + + H E+IY LE +
Sbjct: 642 KGLKKIPGQSWIEVRKKVYTFSAGNLVHFGLEDIYVILEEL 682
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 183/385 (47%), Gaps = 23/385 (5%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFI 68
N L A +RC + +QL S L + F A +L+ + + L++AR +
Sbjct: 27 NDELIYSFHAFFQRCFTLQQARQLHSQLVLTTAHRLPFLAARLIAVYA-RFAFLSHARKV 85
Query: 69 FDHLTTPNTY---LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
FD + + + L+ ++I A S H A LY +M + G P+ F P V+++C
Sbjct: 86 FDAIPLESLHHLLLWNSIIRANVSHGYH-QHALELYVEMRKLG-FLPDGFTLPLVIRACS 143
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
+ S ++VH ++ GF + V LV Y + G + AR+LFD M R++VSW
Sbjct: 144 SLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGR-MEDARQLFDGMFVRSIVSWN 202
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVP----AWNSVIAGCTQNGLFSDAISFFRRM--- 238
M+SGY D A+ +F M + W S+++ + GL+ + + F+ M
Sbjct: 203 TMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVMRTR 262
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
G+E+ L LS + GK IHGYV + G + F+ NALI YGK
Sbjct: 263 GIEIGAE------ALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKH 316
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR--CQDHN-IRPDGV 355
+ +A + F K L SWN++I+S+A G + + F M + DH+ +RP+ +
Sbjct: 317 QHMGDAHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVI 376
Query: 356 TFISLLNACTHGGLVEQGRAYFKLM 380
++ ++++ + G E+ F+ M
Sbjct: 377 SWSAVISGFAYKGRGEKSLELFRQM 401
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 128/279 (45%), Gaps = 39/279 (13%)
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVP---AWNSVIAGCTQNGLFSDAISFF---RRMGM 240
+I+ Y R + +A +FD++P + WNS+I +G A+ + R++G
Sbjct: 69 LIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSIIRANVSHGYHQHALELYVEMRKLG- 127
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
P+ TL + A G L +++H + + G + N L+ MYGK G
Sbjct: 128 -----FLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGR 182
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+++AR+ FD + + SWN+M++ +AL+ S + VF+ M + ++P+ VT+ SL
Sbjct: 183 MEDARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRM---ELEGLQPNSVTWTSL 239
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L++ GL ++ FK+M +T IE EAL VV + +
Sbjct: 240 LSSHARCGLYDETLELFKVM-RTRGIEIG-----------------AEALAVVLSVCADM 281
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYG 459
EV WG ++G + G + F LI G YG
Sbjct: 282 AEVDWGKEIHGYVVKGGYEDYLFVKNALI------GTYG 314
>gi|359491588|ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/464 (34%), Positives = 269/464 (57%), Gaps = 16/464 (3%)
Query: 64 YARFIFDHLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
YA +F+ + P+T+ Y MI A+ S P +A ++ M R P P+ +P L
Sbjct: 81 YALSVFNRIPNPSTFGYNTMIRAHTLLSSPL---AALVIFVRMRRLSVP-PDTHTFPFCL 136
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
K+C + + +H+Q K GF V L++ YS + + A ++F+E S ++V
Sbjct: 137 KACSLLPALSLAQTLHSQAFKFGFGADLFVCNTLIHVYSVN-KHLHHACQVFNETSLKDV 195
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNG-LFSDAISFFRRMGM 240
VS+ A+I G+ +VGD A LFD MP RD +W +++AG Q+G L DAI F RM
Sbjct: 196 VSYNALIGGFIKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAIQLFNRM-- 253
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ +RP+ + LV ALSA G L+ GK IH Y+ +N + +++F+S L+D+Y KCG
Sbjct: 254 -LISTVRPDNIALVSALSACAQLGELEQGKSIHVYIKQNRIPINAFLSTGLVDLYAKCGC 312
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
++ AR F+ + K L +WN+++ +HG+ S+ F M+ + I+PDGV+F+ +
Sbjct: 313 IETAREIFESSPDKNLFTWNALLVGLGMHGRGHLSLHYFSRMI---EAGIKPDGVSFLGI 369
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L C H GLV + R +F+ M YR+ +++HYGC+ DLLGRAG EA+E+++ M +
Sbjct: 370 LVGCGHAGLVCEARNFFQEMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERMPMGG 429
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
D VWG +L GC+I+G + AE A + ++ ++P + G ++A+IY G+W++V ++R+
Sbjct: 430 DVFVWGGVLGGCRIHGNVEIAEKAAENVMALNPEDDGVYSIMADIYANAGRWEDVARIRR 489
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALES 524
++ R K PGCS ++++ V FH + I + +E+
Sbjct: 490 LMHSRQVKKNPGCSLVQLNNGV--FHGFVAGSASSSYILNGMET 531
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 157/466 (33%), Positives = 275/466 (59%), Gaps = 9/466 (1%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
+ YAR +FD ++ + + MI Y + AF L+ +M + P++ I +++
Sbjct: 165 INYARNVFDEMSQRDVVTWNTMIERYC-RFGLLDEAFKLFEEM-KDSNVMPDEMILCNIV 222
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+C R + ++ ++++ + TALV Y+ +G + +A + F +MS RN+
Sbjct: 223 SACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGC-MDMAMEFFRKMSVRNL 281
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
TAM+SGY++ G + +A +FD +D+ W ++I+ ++ +A+ F M
Sbjct: 282 FVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEM--- 338
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
I+P+ VT++ +SA + G L K +H Y + NGL+ I NALI+MY KCG L
Sbjct: 339 CCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGL 398
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
AR F++ + + SW+SMIN+FA+HG++ +S+ +F +M + N+ P+ VTF+ +L
Sbjct: 399 DAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQM---KQENVEPNEVTFVGVL 455
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
C+H GLVE+G+ F MT Y I P+IEHYGC+VDL GRA EALEV++ M + P+
Sbjct: 456 YGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPN 515
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
V+WGSL++ C+++G + E A K++++++P++ G ++++NIY +WD VR +R +
Sbjct: 516 VVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWI 575
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
++ + +K G S I+++ + H+F DK H ++ EIY L +V+
Sbjct: 576 MEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKLYEVVS 621
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 204/489 (41%), Gaps = 109/489 (22%)
Query: 16 VLAILERCNHINHLKQLQS-FLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
+L L C +NH+KQL + L T+ + N + F L + NL+YA +F ++
Sbjct: 18 ILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSF--SSSSINLSYALNLFSSIS- 74
Query: 75 PNTYLYTAMITAYASQPAHASSAF-SLYRDMVRRGQPQPNQFIY---------------P 118
P S F SL RD+ R G+P+ Y P
Sbjct: 75 ----------------PLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFP 118
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
+LK+ V +H K P VET L++ Y+ G I AR +FDEMS
Sbjct: 119 PILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGR-INYARNVFDEMSQ 177
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
R+VV+W MI Y R G + A LF+ M D
Sbjct: 178 RDVVTWNTMIERYCRFGLLDEAFKLFEEMKD----------------------------- 208
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS------------- 285
N+ P+++ L +SA G TG ++ + I+ ++ N + +D+
Sbjct: 209 -----SNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGA 263
Query: 286 ------------------FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFA 327
F+S A++ Y K G L +AR FD+ K L W +MI+++A
Sbjct: 264 GCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYA 323
Query: 328 LHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIE 387
+ ++ VFEEM C I+PD VT +S+++AC + G +++ + + T +E
Sbjct: 324 ESDHPQEALRVFEEMC-CS--GIKPDVVTMLSVISACVNLGTLDKAK-WVHRYTHLNGLE 379
Query: 388 PQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT--DFAEFAV 445
+ L+++ + G + A +V + M + V W S++N ++G + FA
Sbjct: 380 SVLPIDNALINMYAKCGGLDAARDVFEKMPTR-NVVSWSSMINAFAMHGEASDSLSLFAQ 438
Query: 446 KKLIEIDPN 454
K ++PN
Sbjct: 439 MKQENVEPN 447
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 122/281 (43%), Gaps = 45/281 (16%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L AR IFD + +T MI+AYA + H A ++ +M G +P+
Sbjct: 293 KAGRLDDARVIFDQTEMKDLVCWTTMISAYA-ESDHPQEALRVFEEMCCSG-IKPDVVTM 350
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
V+ +C ++ K VH +G E ++ AL+N Y++ G + AR +F++M
Sbjct: 351 LSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGG-LDAARDVFEKMP 409
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVP----AWNSVIAGCTQNGLFSDAIS 233
RNVVSW++MI+ + G+ ++ SLF M +V + V+ GC+ +GL +
Sbjct: 410 TRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKK 469
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
F M E NI P I H G ++D
Sbjct: 470 IFASMTDEY--NITPK----------IEHYG-------------------------CMVD 492
Query: 294 MYGKCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSE 333
++G+ L+EA + + W S++++ +HG+ E
Sbjct: 493 LFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELE 533
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/475 (36%), Positives = 265/475 (55%), Gaps = 45/475 (9%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM------VRRGQPQ 111
K L AR +FD + N +T+MIT Y Q A +A L++D V G
Sbjct: 2062 KCGQLKDARALFDEIPLRNVVSWTSMITGYV-QNEQADNALLLFKDFLEEETEVEDGNNV 2120
Query: 112 P-NQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIAR 170
P + + VL +C V T+ VH +VK GF+ V L+++Y++ G + +++
Sbjct: 2121 PLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPL-VSK 2179
Query: 171 KLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSD 230
K+FD W M ++D +WNS+IA Q+GL +
Sbjct: 2180 KVFD---------W----------------------MEEKDDISWNSMIAVYAQSGLSGE 2208
Query: 231 AISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNA 290
A+ F M V +R N VTL L A H G L+ GK IH V + L+ + + +
Sbjct: 2209 ALEVFHGMVRHVG--VRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTS 2266
Query: 291 LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
+IDMY KCG ++ A++ FDR +K + SW +M+ + +HG+++ ++ +F +M+R +
Sbjct: 2267 IIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRA---GV 2323
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
+P+ +TF+S+L AC+H GLVE+G +F M Y IEP IEHYGC+VDL GRAG EA
Sbjct: 2324 KPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAY 2383
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELG 470
++K MK++PD VVWGSLL C+I+ D E A +KL E+DP+N GY ++L+N+Y + G
Sbjct: 2384 NLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAG 2443
Query: 471 KWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+W +V ++R ++K+R K PG S +E+ +VH F DK HP E IY LE +
Sbjct: 2444 RWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKL 2498
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 225/401 (56%), Gaps = 10/401 (2%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
++ L +L+ C + HL+Q+ + + G S KL+ + + YA +F +
Sbjct: 28 KKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTH-GRIAYAILLFYQIQ 86
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
P T+ + +I A + A LY++MV +G ++F +P V+K+C + L
Sbjct: 87 NPCTFTWNLIIRANTIN-GLSEQALMLYKNMVCQG-IAADKFTFPFVIKACTNFLSIDLG 144
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
K+VH ++K GF V+ L++ Y + G+ A K+F++M RNVVSWT +ISG
Sbjct: 145 KVVHGSLIKYGFSGDVFVQNNLIDFYFKCGH-TRFALKVFEKMRVRNVVSWTTVISGLIS 203
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
GD++ A +FD +P ++V +W ++I G +N +A+ F+RM E NI PN+ T+
Sbjct: 204 CGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAE---NIFPNEYTM 260
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
V + A G+L LG+ IH Y +N +++ ++ ALIDMY KCGS+K+A F+ +
Sbjct: 261 VSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPR 320
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K L +WNSMI S +HG + ++ +F EM R N++PD +TFI +L AC H V++G
Sbjct: 321 KSLPTWNSMITSLGVHGLGQEALNLFSEMERV---NVKPDAITFIGVLCACVHIKNVKEG 377
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
AYF MT+ Y I P EHY C+ +L R+ +EA + K
Sbjct: 378 CAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTK 418
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 125/283 (44%), Gaps = 43/283 (15%)
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
+I Y+ G I A LF + + WN +I T NGL A+ ++ M V I
Sbjct: 65 LIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNM---VCQGI 121
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG------- 299
++ T + A + + LGKV+HG + + G D F+ N LID Y KCG
Sbjct: 122 AADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALK 181
Query: 300 ------------------------SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
L+EARR FD K + SW +MIN + + Q E +
Sbjct: 182 VFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEA 241
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ +F+ M Q NI P+ T +SL+ ACT G++ GR K IE +
Sbjct: 242 LELFKRM---QAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNC-IEIGVYLGTA 297
Query: 396 LVDLLGRAGRFEEALEVVKGM--KIEPDEVVWGSLLNGCKIYG 436
L+D+ + G ++A+EV + M K P W S++ ++G
Sbjct: 298 LIDMYSKCGSIKDAIEVFETMPRKSLP---TWNSMITSLGVHG 337
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 157/336 (46%), Gaps = 50/336 (14%)
Query: 196 DIKNAASLFDSMPDR-DVPAWNSVIAGCTQNGLFSDAISFF---RRMGMEVSDNIRPNQV 251
D N A+ F D+ +V +WNSVIA + G +A+ F R++G+ P +
Sbjct: 1963 DHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGL------IPTRS 2016
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
+ C + + L G++ H + G + D F+S+ALIDMY KCG LK+AR FD
Sbjct: 2017 SFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEI 2076
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVF----EEMMRCQDHNIRP-DGVTFISLLNACT- 365
+ + SW SMI + + Q++N++ +F EE +D N P D V +S+L+AC+
Sbjct: 2077 PLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSR 2136
Query: 366 ----------HGGLVEQG------------RAYFK----LMTKT---YRIEPQIEHYGCL 396
HG +V++G AY K L++K + E + +
Sbjct: 2137 VSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSM 2196
Query: 397 VDLLGRAGRFEEALEVVKGM----KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
+ + ++G EALEV GM + + V ++L C G + ++I++D
Sbjct: 2197 IAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMD 2256
Query: 453 PN-NGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
N G + ++Y + G+ + +K +K++N
Sbjct: 2257 LEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNV 2292
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 30/200 (15%)
Query: 22 RCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYT 81
+C H +K + +G S + Y K + A+ FD + N +T
Sbjct: 2246 KCIHDQVIKMDLEYNVCVGTSIIDMYC---------KCGRVEMAKKTFDRMKEKNVKSWT 2296
Query: 82 AMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV-LESRG----TKMV 136
AM+ Y A A ++ MVR G +PN + VL +C L G M
Sbjct: 2297 AMVAGYGMH-GRAKEALDIFYKMVRAGV-KPNYITFVSVLAACSHAGLVEEGWHWFNAMK 2354
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR-NVVSWTAMISGYTRV- 194
H ++ G E Y +V+ + R+G + A L M + + V W +++ G R+
Sbjct: 2355 HKYDIEPGIEHY----GCMVDLFGRAGC-LNEAYNLIKRMKMKPDFVVWGSLL-GACRIH 2408
Query: 195 -----GDIKNAASLFDSMPD 209
G+I A LF+ PD
Sbjct: 2409 KNVDLGEIA-AQKLFELDPD 2427
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/525 (32%), Positives = 280/525 (53%), Gaps = 48/525 (9%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLT-YARFIFDH 71
+Q A+ RC + +KQ+ + + G + +L+ + + T +AR +FD
Sbjct: 8 QRQQPALWRRCRSLRQIKQVHALMVLQGFLSDSSALRELIFASAVGVRGGTAHARLVFDR 67
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP------QPNQFIYPHVLKSCP 125
+ P+ ++Y +I A A A S+Y M R +P++ +P VL++C
Sbjct: 68 IPHPDRFMYNTLIRGAAHSDA-PRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACA 126
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
+ VH +VK+G E V AL+ ++ G D+G A LFD + + V+W+
Sbjct: 127 AMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLG-DLGAAAALFDGEAREDAVAWS 185
Query: 186 AMISG-------------------------------YTRVGDIKNAASLFDSMPDRDVPA 214
AMISG Y ++GD+ A LFD PDRDV +
Sbjct: 186 AMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVS 245
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
WN++I+G + G A+ F +M + +P+ VT++ LSA +G L G+ +HG
Sbjct: 246 WNAMISGYVRCGSRKQAMELFEQM---QAMGEKPDTVTMLSLLSACADSGDLDAGRRLHG 302
Query: 275 YVYR--NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQS 332
++ + + + + NALIDMY KCGS+ A F K +++WNS+I ALHG +
Sbjct: 303 FLSGRFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHA 362
Query: 333 ENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEH 392
SI VF +M++ N++PD +TF+++L AC+HGG+V++G YF LM + YRIEP I+H
Sbjct: 363 TESIAVFRKMLQ---GNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKH 419
Query: 393 YGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
YGC+VD+L R G +EA E + MKIEP+ V+W +LL C+I+G + AE A ++L++
Sbjct: 420 YGCMVDMLSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKAR 479
Query: 453 PNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
+ G ++L+NIY +G+W +RK++ D K G + I+
Sbjct: 480 SDASGDFVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAGRAVID 524
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 166/465 (35%), Positives = 260/465 (55%), Gaps = 13/465 (2%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +F+ + + +T+M + Y + A +R M G+ +PN +L +C
Sbjct: 132 ARLVFEGMPFRDVISWTSMASCYVN-CGLLREALGAFRKMGLNGE-RPNSVTVSSILPAC 189
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
D+ + + + VH +V++G V +ALVN Y+ S I A+ +FD MS R+ VSW
Sbjct: 190 TDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYA-SCLSIRQAQLVFDSMSRRDTVSW 248
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDV----PAWNSVIAGCTQNGLFSDAISFFRRMGM 240
+I+ Y + + S+F M V +WN+VI GC QNG A+ RM
Sbjct: 249 NVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQ- 307
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ +PNQ+T+ L A + L+ GK IHGY++R+ D + AL+ MY KCG
Sbjct: 308 --NSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGD 365
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
L+ +RR F +K+ SWN+MI + ++HG E ++ +F EM+ D +RP+ VTF +
Sbjct: 366 LELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMV---DSGVRPNSVTFTGV 422
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+ C+H LV++G F M++ + +EP +H+ C+VD+L RAGR EEA E +K M IEP
Sbjct: 423 LSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEP 482
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
WG+LL GC++Y + A +L EI+ +N G ++L+NI W E + RK
Sbjct: 483 TAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRK 542
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+++DR K PGCSWI+V +VH F DK++ +++EIY L+ M
Sbjct: 543 LMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYM 587
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 5/187 (2%)
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I Y+ GD++ A LFD +P D+P W +I+ T++G +AI ++ + +
Sbjct: 18 IKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYN--DFRHKNCVE 75
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P+++ L+ A + K +H R G D + NALIDMYGKC + AR
Sbjct: 76 PDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLV 135
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F+ + + SW SM + + G ++ F +M + RP+ VT S+L ACT
Sbjct: 136 FEGMPFRDVISWTSMASCYVNCGLLREALGAFRKM---GLNGERPNSVTVSSILPACTDL 192
Query: 368 GLVEQGR 374
++ GR
Sbjct: 193 KDLKSGR 199
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/579 (31%), Positives = 300/579 (51%), Gaps = 70/579 (12%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
L +L++L++ + + Q+ + L T F A +L+ K N+ YA +F
Sbjct: 10 LKNPLLSLLQKSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQ 69
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ PN+++ M+ Y ++ + A Y +M R+G N + YP VLK+C +
Sbjct: 70 IHQPNSFICNTMVKCY-TESSTPERALRFYAEMRRKGLLGDN-YTYPFVLKACGAMCGLL 127
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN--------------------------- 164
+V + VK GF V L++ Y R G
Sbjct: 128 EGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYV 187
Query: 165 ---DIGIARKLFDEMSDRNVVSWTAMISGY-TRVGDIKNAASLFDSMPDRDVPAWNSVIA 220
++ A+ +FDEM +R+VVSW+ MI GY ++G++ A FDSMP RD+ +WNS+I
Sbjct: 188 WCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMID 247
Query: 221 GCTQNG-------LF------------------------SDAISFFRRMGMEVSDNIRPN 249
G + G +F +A++ FR+M + I+P+
Sbjct: 248 GYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQM---LCQGIKPD 304
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+V++V A+SA G L G+ IH Y+ RN + LD + AL+DMY KCGS EARR F+
Sbjct: 305 RVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFN 364
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
++ + SWN MI ++G + ++ F +M + I D + F+ +L AC+H L
Sbjct: 365 SMPERNVVSWNVMIVGLGMNGFGKEALECFTQM---EMERIPMDDLLFLGVLMACSHANL 421
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
V +G F M YR+EP++EHYGCLVDLLGRAG+ ++ +++ M ++P+ +WGSLL
Sbjct: 422 VTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLL 481
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
C+I+ AE V++L E+ ++ G ++++NIY ++G W+ + ++RK++K+R K
Sbjct: 482 LACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKK 541
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
G S IEVD V +F S +K+H EEI + S+ +
Sbjct: 542 DIGRSVIEVDGNVEEFVSGEKSHILREEIELVIWSLAKM 580
>gi|297811669|ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319555|gb|EFH49977.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 548
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 184/528 (34%), Positives = 282/528 (53%), Gaps = 47/528 (8%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARF 67
++T N++ + + C + L Q+ +F+ G +L+ +L + L YA
Sbjct: 8 DRTTNRRRSKLWQNCKNFRTLMQIHAFMVVNGLMSNLSVVGELIYSASLSVPGALKYAHK 67
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F+ + P+ + ++ A Q +LY +M +RG P+++ + VLK+C +
Sbjct: 68 LFEEIPKPDVSICNHVLRGSA-QSLKPEKTVALYTEMEKRG-VSPDRYTFTFVLKACSKL 125
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
+H ++V+ GF V+ AL+ ++ G D+GIA +LFD+ + + V+W++M
Sbjct: 126 EWRSNGFAIHGKVVRHGFLLNEYVKNALILFHANCG-DLGIASELFDDSAKAHKVAWSSM 184
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC----------------------TQN 225
SGY + G I A LFD MPD+D AWN +I GC T N
Sbjct: 185 TSGYAKRGKIDEAMRLFDEMPDKDQVAWNVMITGCLKCREMDSARELFDRFTEKDVVTWN 244
Query: 226 GLFS---------DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV 276
+ S +A+S F+ M P+ VT++ LSA G L+ GK +H Y+
Sbjct: 245 AMISGYVNCGYPKEALSIFKEMR---DAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 301
Query: 277 YRNG-----LDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
+ + + I NALIDMY KCGS+ A F + L++WN++I ALH
Sbjct: 302 LETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGMKDRDLSTWNTLIVGLALH-H 360
Query: 332 SENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE 391
+E S+ +FEEM R + + P+ VTFI ++ AC+H G V++GR YF LM Y IEP I+
Sbjct: 361 AEGSVEMFEEMQRLK---VWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIK 417
Query: 392 HYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
HYGC+VD+LGRAG EEA V+ MKIEP+ +VW +LL CKIYG + ++A +KL+ +
Sbjct: 418 HYGCMVDMLGRAGLLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSM 477
Query: 452 DPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVD 499
+ G ++L+NIY G+WD V+KVRKM D K G S IE D
Sbjct: 478 RKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGISLIEED 525
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/521 (32%), Positives = 276/521 (52%), Gaps = 61/521 (11%)
Query: 50 KLVR-FCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVR-- 106
KL+R + +LK ++ AR +FD + N + MI +Y + YR+ ++
Sbjct: 80 KLMRAYASLK--DVATARKVFDEIPERNVIIINVMIRSYVNN--------GFYREGIQVF 129
Query: 107 ----RGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRS 162
+P+ + +P VLK+C K +H K G V LV+ Y +
Sbjct: 130 GTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKC 189
Query: 163 GNDIGIARKLFDEMSDRNVVSWTAMISGY------------------------------- 191
G + AR + DEMS R+VVSW ++++GY
Sbjct: 190 GF-LSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASL 248
Query: 192 ------TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
T ++ +F M + + +WN +I +N + +A+ + GME +D
Sbjct: 249 LPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYS--GME-ADG 305
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
P+ V++ L A G T L LGK IHGY+ R L + + NALIDMY KCG L AR
Sbjct: 306 FEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRAR 365
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
F+ + + SW +MI+++ G+ +++ +F +M QD + PD + F++ L AC+
Sbjct: 366 DVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKM---QDSGLVPDSIAFVTTLAACS 422
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
H GL+E+GR+ FKLMT Y+I P++EH C+VDLLGRAG+ +EA + ++ M +EP+E VW
Sbjct: 423 HAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVW 482
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
G+LL C+++ TD A KL ++ P GY ++L+NIY + G+W+EV +R ++K +
Sbjct: 483 GALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSK 542
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K PG S +EV++ +H F D++HP++ EIY L+ +V
Sbjct: 543 GLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLV 583
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 179/404 (44%), Gaps = 80/404 (19%)
Query: 103 DMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRS 162
++ ++ P+ F+ VL + PD+ + + VH++I+ + L+ +Y+ S
Sbjct: 32 ELDQKNSPKETAFMLGQVLDTYPDL---KTLRTVHSRIISEDLRYNSSLGVKLMRAYA-S 87
Query: 163 GNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC 222
D+ ARK+FDE+ +RNV+ MI Y
Sbjct: 88 LKDVATARKVFDEIPERNVIIINVMIRSY------------------------------- 116
Query: 223 TQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLD 282
NG + + I F G S +++P+ T C L A +G + +GK IHG + GL
Sbjct: 117 VNNGFYREGIQVF---GTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLS 173
Query: 283 LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM 342
F+ N L+ MYGKCG L EAR D S++ + SWNS++ +A + + ++++ V EM
Sbjct: 174 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREM 233
Query: 343 MRCQDHNIRPDGVTFISLLNAC---THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
+ I D T SLL A T ++ +FK+ K+ + + ++ +
Sbjct: 234 ---ESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKS------LVSWNVMIGV 284
Query: 400 LGRAGRFEEALEVVKGMK---IEPDEVVWGSLLNGC----------KIYGRTDFAEFAVK 446
+ EA+E+ GM+ EPD V S+L C KI+G + K
Sbjct: 285 YMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER-----K 339
Query: 447 KLIEIDPNNGGYGIMLAN----IYGELGKWDEVRKVRKMLKDRN 486
KLI PN ++L N +Y + G D R V + +K R+
Sbjct: 340 KLI---PN-----LLLENALIDMYAKCGCLDRARDVFENMKSRD 375
>gi|356514477|ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 526
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/524 (34%), Positives = 292/524 (55%), Gaps = 28/524 (5%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN----LTYARFIFDHLTT 74
+ ++CN + LKQL + + + T + L+ L SN +YAR IF HLT
Sbjct: 11 VAQKCNTLTQLKQLHAHILRCRINDTPYALAPLLS--VLATSNDASFFSYARSIFRHLTN 68
Query: 75 PNTYLYTAMITAY--ASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
NT+++ MI Y P HA S Y M++ G N + +P ++K+C +L S
Sbjct: 69 RNTFMHNTMIRGYLQCRSPLHA---VSCYLSMLQNGVAV-NNYTFPPLIKACIALLPSSP 124
Query: 133 T----KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ ++VH +VK G P V +A + YS S ++ AR LFDE S ++VV TAM+
Sbjct: 125 SNIVGRLVHGHVVKFGLRNDPYVVSAFIEFYSVS-REVDTARVLFDETSYKDVVLGTAMV 183
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
GY ++G++K+A +FD MP+R+ +W++++A ++ F + ++ F M E ++ P
Sbjct: 184 DGYGKMGNVKSAREVFDKMPERNAVSWSAMMAAYSRVSDFKEVLALFTEMQNEGTE---P 240
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
N+ LV L+A H G L G +H Y R L+ + ++ AL+DMY KCG ++ A F
Sbjct: 241 NESILVTVLTACAHLGALTQGLWVHSYARRFHLESNPILATALVDMYSKCGCVESALSVF 300
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
D K +WN+MI+ AL+G + S+ +F +M + +P+ TF+++L ACTH
Sbjct: 301 DCIVDKDAGAWNAMISGEALNGDAGKSLQLFRQMAASR---TKPNETTFVAVLTACTHAK 357
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEA---LEVVKGMKIEPDEVVW 425
+V+QG F+ M+ Y + P++EHY C++DLL RAG EEA +E G D VW
Sbjct: 358 MVQQGLWLFEEMSSVYGVVPRMEHYACVIDLLSRAGMVEEAEKFMEEKMGGLTAGDANVW 417
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD-EVRKVRKMLKD 484
G+LLN C+I+ KKL+++ + G ++ NIY E G WD E KVR +++
Sbjct: 418 GALLNACRIHKNIHVGNRVWKKLVDMGVTDCGTHVLTYNIYREAG-WDVEANKVRSRIEE 476
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
K PGCS IEVD +V +F + D +HP+ +E+ L+S++ +
Sbjct: 477 VGMKKKPGCSIIEVDNEVEEFLAGDHSHPQAQEMCKLLDSILKM 520
>gi|222622042|gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
Length = 545
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/516 (34%), Positives = 277/516 (53%), Gaps = 27/516 (5%)
Query: 19 ILERCNHINHLKQLQSFLTTLG-QSQTNFYAFKLVRFCTLKLSNLTYARF--------IF 69
+L +C I L+++ + T G + K+ R +YA F +F
Sbjct: 26 LLTQCKTIRELQRIHAQALTHGLHPNQQSISCKIFR---------SYAEFGRPADAGRLF 76
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
D + P+ +T++++ + + H A S++ + G +P+ F L + + +
Sbjct: 77 DEIPHPDIISFTSLMSLHL-KLDHHWKAISVFSHAIASGH-RPDGFAAVGALSASGGLGD 134
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
R +VH I + G + VV ALV+ Y R G AR +FD M ++ V+W +M+
Sbjct: 135 QRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGK-FEPARTVFDRMLVKDEVTWGSMLY 193
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GY + + +A S F MP + +W ++I G Q+ A+ F +M +E RPN
Sbjct: 194 GYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLE---GHRPN 250
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+T+V LSA G L LG+ IHGY ++ + ++NAL+DMY K GS+ A F+
Sbjct: 251 HITIVGVLSACADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFE 310
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
K +W +MI+SF + G ++ +F +M+R I P+ VTF+S+L+AC+H GL
Sbjct: 311 EVQMKDAFTWTTMISSFTVQGNGRKAVELFWDMLRS---GILPNSVTFVSVLSACSHAGL 367
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
+++GR F M + Y I+P++EHYGC+VDLLGR G EEA ++ M +EPD V+W SLL
Sbjct: 368 IQEGRELFDKMREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLL 427
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
+ C +G AE A ++I+ +P + G ++L N+Y +W E +RK + R YK
Sbjct: 428 SACLAHGNDRLAEIAGMEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYK 487
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PGCSWIEVD VH+F DKTH EIY LE M
Sbjct: 488 KPGCSWIEVDGVVHEFLVEDKTHDARREIYVTLEIM 523
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/512 (34%), Positives = 277/512 (54%), Gaps = 21/512 (4%)
Query: 19 ILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L+ C+ + +K Q+ L L F L+ F +K L A +FD +
Sbjct: 133 VLKACSRVGLVKEGMQIHGLLKKLEFGSDLFLQNCLISF-YVKCGCLVRASQVFDRMPKR 191
Query: 76 NTYLYTAMITAY--ASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
++ Y +MI Y + A F + R N I + +S
Sbjct: 192 DSVSYNSMIDGYVKGGRIDLARVVFDCI-PLEERNLISWNSLIRGYA--------QSEDG 242
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+V Q+ E+ + ++++ + G + A+ LFD M +R++VSW MI GY +
Sbjct: 243 ILVAWQLFAKMPERDLISWNSMIDGCVKCGR-MEDAQGLFDRMPNRDIVSWANMIDGYAK 301
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
G + A SLFD MP+RDV A+N+++ G QNG +A+ F GM+ N + TL
Sbjct: 302 NGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIF--YGMQSDGNFLLDNATL 359
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
+ ALSAI G + G IH ++ G LD + ALIDMY KCGS++ A F+ +
Sbjct: 360 LIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENIKE 419
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K + WN++I A+HG E F+ +M + + PD +TFI LLNAC H GLV++G
Sbjct: 420 KSVDHWNAIIGGLAIHGLGE---LAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEG 476
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
F+LM + +++EP+++HYGC+VD+LGRAG EEA V+ M EP++V+W SLL+ CK
Sbjct: 477 MMCFELMRRVHKVEPKLQHYGCMVDILGRAGHIEEAKNFVEEMPFEPNDVIWRSLLSACK 536
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
+ + + + L+ +D + ++ +N+Y LGKW++VRKVR M+K +N K PGC
Sbjct: 537 THESFNVGQPVAENLMRLDSPSPSSYVLASNMYAGLGKWNDVRKVRAMMKQKNLKKIPGC 596
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
SWIE++ V+ F DK+HP+ IY L+S+
Sbjct: 597 SWIELEGHVYAFFVQDKSHPQFSGIYSILDSL 628
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 156/370 (42%), Gaps = 69/370 (18%)
Query: 109 QPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGND--I 166
QP + +LK C + + +H +++ +GF + + T ++ S+S S + I
Sbjct: 10 QPWNSAIPTLVLLKKCKRLSD---INQIHARLLTTGFIKNTFLTTKIILSFSTSLHAPLI 66
Query: 167 GIARKLF-----------DEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAW 215
AR +F +E +++ W A+I Y+ D K A L M
Sbjct: 67 EFARFIFFRHHAFEFDEKEEEEEKDPFLWNAIIKTYSHGHDPKEAMWLVSLM-------- 118
Query: 216 NSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGY 275
+NG F+D + TL L A G+++ G IHG
Sbjct: 119 -------LENGAFAD-------------------KFTLSLVLKACSRVGLVKEGMQIHGL 152
Query: 276 VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
+ + D F+ N LI Y KCG L A + FDR K+ S+NSMI+ + G+ + +
Sbjct: 153 LKKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLA 212
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLN--ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
VF + + ++ N+ +++ SL+ A + G++ + + K+ E + +
Sbjct: 213 RVVF-DCIPLEERNL----ISWNSLIRGYAQSEDGILVAWQLFAKM------PERDLISW 261
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD-----FAEFAVKKL 448
++D + GR E+A + M D V W ++++G GR D F E + +
Sbjct: 262 NSMIDGCVKCGRMEDAQGLFDRMP-NRDIVSWANMIDGYAKNGRVDIARSLFDEMPERDV 320
Query: 449 IEIDPNNGGY 458
+ + GGY
Sbjct: 321 VAYNAMMGGY 330
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/525 (32%), Positives = 280/525 (53%), Gaps = 48/525 (9%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLT-YARFIFDH 71
+Q A+ RC + +KQ+ + + G + +L+ + + T +AR +FD
Sbjct: 8 QRQQPALWRRCRSLRQIKQVHALMVLQGFLSDSSALRELIFASAVGVRGGTAHARLVFDR 67
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP------QPNQFIYPHVLKSCP 125
+ P+ ++Y +I A A A S+Y M R +P++ +P VL++C
Sbjct: 68 IPHPDRFMYNTLIRGAAHSDA-PRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACA 126
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
+ VH +VK+G E V AL+ ++ G D+G A LFD + + V+W+
Sbjct: 127 AMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLG-DLGAAAALFDGEAREDAVAWS 185
Query: 186 AMISG-------------------------------YTRVGDIKNAASLFDSMPDRDVPA 214
AMISG Y ++GD+ A LFD PDRDV +
Sbjct: 186 AMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVS 245
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
WN++I+G + G A+ F +M + +P+ VT++ LSA +G L G+ +HG
Sbjct: 246 WNAMISGYVRCGSRKQAMELFEQM---QAMGEKPDTVTMLSLLSACADSGDLDAGRRLHG 302
Query: 275 YVYR--NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQS 332
++ + + + + NALIDMY KCGS+ A F K +++WNS+I ALHG +
Sbjct: 303 FLSGRFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHA 362
Query: 333 ENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEH 392
SI VF +M++ N++PD +TF+++L AC+HGG+V++G YF LM + YRIEP I+H
Sbjct: 363 TESIAVFRKMLQ---GNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKH 419
Query: 393 YGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
YGC+VD+L R G +EA E + MKIEP+ V+W +LL C+I+G + AE A ++L++
Sbjct: 420 YGCMVDMLSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKAR 479
Query: 453 PNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
+ G ++L+NIY +G+W +RK++ D K G + I+
Sbjct: 480 SDASGDFVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAGRAVID 524
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 167/497 (33%), Positives = 268/497 (53%), Gaps = 41/497 (8%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
K++ ++ G + F L+ K ++ A IF T + + TA+I+ Y
Sbjct: 194 KEIHGYILRHGIALDVFLKSALIDI-YFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVL 252
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
+ + A ++R ++ + PN VL +C + K +H I+K G ++
Sbjct: 253 NGLN-NDALEIFRWLLEE-KMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERR 310
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
V +A+++ Y++ G + A +F MP+
Sbjct: 311 HVGSAIMDMYAKCGR--------------------------------LDLAYQIFRRMPE 338
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
+D WN++I C+QNG +AI FR+MG E + + V++ ALSA + L G
Sbjct: 339 KDAVCWNAIITNCSQNGKPQEAIDLFRQMGRE---GLSYDCVSISAALSACANLPALHHG 395
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
K IH ++ + D + F +ALIDMYGKCG+L AR FD +K SWNS+I ++ H
Sbjct: 396 KAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSH 455
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
G E S+ +F +M+ + I+PD VTF+++L+AC H G V++G YF+ MT+ Y I +
Sbjct: 456 GHLEVSLALFHKML---EDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPAR 512
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
+EHY C+VDL GRAGR EA E +K M PD+ VWG+LL C+++G + AE A + L+
Sbjct: 513 MEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLL 572
Query: 450 EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLD 509
++DP N G ++L+N++ + G+W VRK+R ++K R K PG SWIEV+K H F + D
Sbjct: 573 DLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAAD 632
Query: 510 KTHPRTEEIYDALESMV 526
+HP + +IY L +++
Sbjct: 633 GSHPESAQIYSVLNNLL 649
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 177/374 (47%), Gaps = 44/374 (11%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + L+ M+ + + +SA ++ DM R Q +PN + VL C
Sbjct: 26 ARRLFDKMPNKDCVLWNVMLNGFV-KCGEPNSAVKVFEDM-RNCQTKPNSITFASVLSIC 83
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
S +H ++ GF P+V ALV YS+ F ++SD
Sbjct: 84 ASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK-----------FGQLSD------ 126
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
A LF++MPD +V WN +IAG QNG +A F M +S
Sbjct: 127 ---------------ALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEM---ISA 168
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ P+ +T L ++ + L+ GK IHGY+ R+G+ LD F+ +ALID+Y KC + A
Sbjct: 169 GVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMA 228
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ F +++ + ++I+ + L+G + +++ +F ++ + + P+ VT S+L AC
Sbjct: 229 CKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLL---EEKMSPNAVTLASVLPAC 285
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYG-CLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
+ G+ + K E + H G ++D+ + GR + A ++ + M E D V
Sbjct: 286 AGLATLNLGKELHANILKHGLDERR--HVGSAIMDMYAKCGRLDLAYQIFRRMP-EKDAV 342
Query: 424 VWGSLLNGCKIYGR 437
W +++ C G+
Sbjct: 343 CWNAIITNCSQNGK 356
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 143/337 (42%), Gaps = 40/337 (11%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+++I Y G I++A LFD MP++D WN ++ G + G + A+ F M +
Sbjct: 11 SSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMR---NC 67
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+PN +T LS + + G +HG V G D ++NAL+ MY K G L +A
Sbjct: 68 QTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDA 127
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ F+ + +WN MI F +G + + +F EM+ + PD +TF S L +
Sbjct: 128 LKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISA---GVSPDSITFASFLPSV 184
Query: 365 THGGLVEQGRA-----------------------YFK-----LMTKTYRIEPQIEHYGCL 396
T ++QG+ YFK + K ++ ++ C
Sbjct: 185 TESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCT 244
Query: 397 VDLLGRA--GRFEEALEVVKGM---KIEPDEVVWGSLLNGCKIYGRTDFA-EFAVKKLIE 450
+ G G +ALE+ + + K+ P+ V S+L C + E L
Sbjct: 245 AIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKH 304
Query: 451 IDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
G + ++Y + G+ D ++ + + +++A
Sbjct: 305 GLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDA 341
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 96/189 (50%), Gaps = 9/189 (4%)
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
G ++D F+ ++LI +Y + G +++ARR FD+ K WN M+N F G+ +++ VF
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT-YRIEPQIEHYGCLVD 398
E+M CQ +P+ +TF S+L+ C L E G L+ + +P + + LV
Sbjct: 62 EDMRNCQ---TKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVAN--ALVA 116
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNG 456
+ + G+ +AL++ M + + V W ++ G G D A ++I + P++
Sbjct: 117 MYSKFGQLSDALKLFNTMP-DTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSI 175
Query: 457 GYGIMLANI 465
+ L ++
Sbjct: 176 TFASFLPSV 184
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 126/314 (40%), Gaps = 54/314 (17%)
Query: 25 HINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMI 84
H N LK +G + + YA K L A IF + + + A+I
Sbjct: 298 HANILKHGLDERRHVGSAIMDMYA---------KCGRLDLAYQIFRRMPEKDAVCWNAII 348
Query: 85 TAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG 144
T SQ A L+R M R G I L +C ++ K +H+ ++K
Sbjct: 349 TN-CSQNGKPQEAIDLFRQMGREGLSYDCVSISA-ALSACANLPALHHGKAIHSFMIKGA 406
Query: 145 FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLF 204
F+ E+AL++ Y + GN + +AR +FD M ++N VSW ++I+ Y G ++ + +LF
Sbjct: 407 FDSEVFAESALIDMYGKCGN-LSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALF 465
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
M + D I+P+ VT + LSA GH G
Sbjct: 466 HKM----------------------------------LEDGIQPDHVTFLTILSACGHAG 491
Query: 265 MLQLG-KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS----W 319
+ G + G+ ++D++G+ G L E AF+ + W
Sbjct: 492 QVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNE---AFETIKNMPFSPDDGVW 548
Query: 320 NSMINSFALHGQSE 333
+++ + +HG E
Sbjct: 549 GTLLGACRVHGNVE 562
>gi|297843364|ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/458 (38%), Positives = 266/458 (58%), Gaps = 19/458 (4%)
Query: 73 TTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC---PDV 127
T+ NT +T+ IT + A A+ FS DM R +PN + +L C P
Sbjct: 32 TSENTVSWTSRITLLTRNGRLAEAAKEFS---DM-RLAGVEPNHITFIAILSGCGDFPSG 87
Query: 128 LESRGTKMVHTQIVKSGFEQ-YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
E+ G ++H K G ++ + +V TA++ YS+ G + AR +FD M D+N V+W
Sbjct: 88 SEALG-DLLHGYACKLGLDRNHVMVGTAIIGMYSKRGR-VKKARCVFDYMEDKNSVTWNT 145
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
MI GY R G + NAA +FD MP+RD+ +W ++I G G +A+++FR M + +
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQIS---GV 202
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
+P+ V ++ AL+A + G L G +H YV + +SN+LID+Y +CG ++ AR+
Sbjct: 203 KPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQ 262
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
FD+ K+ + SWNS+I FA +G + S+ F +M Q+ +PD VTF L AC+H
Sbjct: 263 VFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM---QEERFKPDAVTFTGALTACSH 319
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GLVE+G YF++M YRI P+IEHYGCLVDL RAGR E+AL++V+ M ++P+EVV G
Sbjct: 320 VGLVEEGLRYFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIG 379
Query: 427 SLLNGCKIYG-RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
SLL C+ +G T AE +K L +++ + ++L+N+Y GKW+ K+R+ +K
Sbjct: 380 SLLAACRNHGNNTVLAEKLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGL 439
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K PG S IE+D H F + D H T I + L+
Sbjct: 440 GLKKQPGFSSIEIDDCTHVFMAGDSAHVETTNICEVLK 477
>gi|242047514|ref|XP_002461503.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
gi|241924880|gb|EER98024.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
Length = 786
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/388 (40%), Positives = 236/388 (60%), Gaps = 8/388 (2%)
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS-DRNVVSWTAMISGYTRV 194
VH VK+G V AL++ Y G D+ RK+FDE+ R+VV+W A+++GY R
Sbjct: 152 VHALAVKAGAAGDLYVRNALIHFYGVCG-DVAAMRKVFDELPLVRDVVTWNAVLAGYVRA 210
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + A +FD MP RD +W++V+ G + G A+ F+ M V ++ N+ +V
Sbjct: 211 GMVGVAREVFDGMPMRDEVSWSTVVGGYVKEGELEVALGVFKNM---VVQGVKANEAAIV 267
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
ALSA G+L+ GK +H + R G+ + + AL+DMY KCGS+ A+ FD +
Sbjct: 268 TALSAAAQLGLLEQGKFVHEVIKRAGVAMSMNLGAALVDMYSKCGSVAAAKEVFDAMPWR 327
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ +WNSMI A HG +++ +FE+ + P +TF+ +LNAC+ GLV++GR
Sbjct: 328 DVFAWNSMICGLATHGLGHDAVQLFEKFV---SEGFCPTNITFVGVLNACSRTGLVDEGR 384
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
YFKLM + Y IE ++EHYGC+VDLL RAG +EA+E+++GM I PD V+WG++L+ CK
Sbjct: 385 WYFKLMAEKYGIESEMEHYGCMVDLLSRAGLVQEAIELIEGMHIPPDPVLWGTVLSACKR 444
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+G D KLIE+DP + GY ++LA+IY + KWDEVRKVRK++ +R K+ G S
Sbjct: 445 HGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKSAGWS 504
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+E VH+F D H + +IY+ L
Sbjct: 505 LMEAHGIVHKFLVGDMDHKDSVQIYNML 532
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 142/353 (40%), Gaps = 77/353 (21%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + ++ ++ Y + A ++++MV +G + N+ L +
Sbjct: 216 AREVFDGMPMRDEVSWSTVVGGYVKE-GELEVALGVFKNMVVQGV-KANEAAIVTALSAA 273
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ K VH I ++G + ALV+ YS+ G+ + A+++FD M R+V +W
Sbjct: 274 AQLGLLEQGKFVHEVIKRAGVAMSMNLGAALVDMYSKCGS-VAAAKEVFDAMPWRDVFAW 332
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+MI G +GL DA+ F + VS+
Sbjct: 333 NSMICGL-------------------------------ATHGLGHDAVQLFEKF---VSE 358
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
P +T V L+A TG++ G+ + + + YG
Sbjct: 359 GFCPTNITFVGVLNACSRTGLVDEGR---------------WYFKLMAEKYG-------- 395
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ + + M++ + G + +I + E M +I PD V + ++L+AC
Sbjct: 396 -------IESEMEHYGCMVDLLSRAGLVQEAIELIEGM------HIPPDPVLWGTVLSAC 442
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIE-HYGCLVDLLGRAGRFEEALEVVKGM 416
GLV+ G + K ++P + +Y L + +A +++E +V K M
Sbjct: 443 KRHGLVDLG---ITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLM 492
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 78/201 (38%), Gaps = 37/201 (18%)
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR------------ 315
+G +H + G D ++ NALI YG CG + R+ FD R
Sbjct: 148 MGAHVHALAVKAGAAGDLYVRNALIHFYGVCGDVAAMRKVFDELPLVRDVVTWNAVLAGY 207
Query: 316 --------------------LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
SW++++ + G+ E ++ VF+ M+ ++ +
Sbjct: 208 VRAGMVGVAREVFDGMPMRDEVSWSTVVGGYVKEGELEVALGVFKNMVV---QGVKANEA 264
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
++ L+A GL+EQG+ + + K + + LVD+ + G A EV
Sbjct: 265 AIVTALSAAAQLGLLEQGK-FVHEVIKRAGVAMSMNLGAALVDMYSKCGSVAAAKEVFDA 323
Query: 416 MKIEPDEVVWGSLLNGCKIYG 436
M D W S++ G +G
Sbjct: 324 MPWR-DVFAWNSMICGLATHG 343
>gi|224097410|ref|XP_002310922.1| predicted protein [Populus trichocarpa]
gi|222850742|gb|EEE88289.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/482 (35%), Positives = 270/482 (56%), Gaps = 34/482 (7%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
+L A ++F + +P+T L+ MI A+A A S + M+ +P+ Y +
Sbjct: 75 HLLSAHYVFKDIQSPSTILWNQMIRAHARSQTPAKS-IQFFNQMLLT-DSRPDAHTYSFL 132
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPV-VETALVNSYSR----SGNDIGIARKLFDE 175
L +C L R + VH++++ +G+ V + + LVN Y+ G + ARK+FD+
Sbjct: 133 LAACTSSLSLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGGEGAALASARKVFDD 192
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
MS+RNVV W +M++GY R G++ A +F MP+R+V +W ++I+G +NG A++ F
Sbjct: 193 MSERNVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQALNLF 252
Query: 236 ---RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI----- 287
R+ G+E+ +QV L+ AL+A G L++G IH Y+ D+F+
Sbjct: 253 DQMRKAGVEL------DQVVLLAALTACAELGDLKMGMWIHSYIQ------DTFVGSNQR 300
Query: 288 -----SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM 342
+NALI MY CG + EA F ++ SW S+I +FA G ++ + +F M
Sbjct: 301 VLVSLNNALIHMYASCGMIDEAYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSM 360
Query: 343 MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGR 402
R RPDG+TFI +L AC+H GLV++GR FK M + + I+P+IEHYGC+VDLL R
Sbjct: 361 QRLGTSEARPDGITFIGVLCACSHAGLVDEGRQLFKDMIQRWGIKPRIEHYGCMVDLLSR 420
Query: 403 AGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI-EIDPNN-GGYGI 460
AG +EA E++ M ++P+ VWG+LL GC+ Y + A +KL+ E DP+ GY
Sbjct: 421 AGFLDEAQELIATMPVKPNNAVWGALLGGCRFYRNAELASLVSQKLVAEPDPDKAAGYLS 480
Query: 461 MLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYD 520
+LA +Y KW +V VR+ + K G SW+++++ H + D+TH T IY+
Sbjct: 481 LLAQVYASAEKWQDVATVRQKMVAMGVKKPAGQSWVQINEVFHDSVAGDRTHENTSSIYE 540
Query: 521 AL 522
L
Sbjct: 541 ML 542
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/489 (35%), Positives = 263/489 (53%), Gaps = 25/489 (5%)
Query: 39 LGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAF 98
LG + + YA K + AR IFD + N ++AMI AY A
Sbjct: 296 LGTAMIDMYA---------KCGCVESAREIFDRMEEKNVISWSAMIAAYGYH-GQGRKAL 345
Query: 99 SLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVN- 157
L+R M+ G P++ +L +C + + VH Q G Q +V LV+
Sbjct: 346 DLFRMMLSSGM-LPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHF 404
Query: 158 -SYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWN 216
SY R+ +D A LFD M R+ VSW+ M+ G+ +VGD N F + N
Sbjct: 405 YSYYRALDD---AYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDN 461
Query: 217 SVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV 276
+ C G ++++ F +M E + P++V +V + A G + + I Y+
Sbjct: 462 YTLPFC---GNANESLVLFDKMREE---GVVPDKVAMVTVVFACAKLGAMHKARTIDDYI 515
Query: 277 YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSI 336
R LD + A+IDM+ KCG ++ AR FDR +K + SW++MI ++ HGQ ++
Sbjct: 516 QRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKAL 575
Query: 337 CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCL 396
+F M+R I P+ +T +SLL AC+H GLVE+G +F LM + Y + ++HY C+
Sbjct: 576 DLFPMMLR---SGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCV 632
Query: 397 VDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNG 456
VDLLGRAGR +EAL++++ M +E DE +WG+ L C+ + AE A L+E+ P N
Sbjct: 633 VDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNP 692
Query: 457 GYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTE 516
G+ I+L+NIY G+W++V K R ++ R K PG +WIEVD + HQF D THPR++
Sbjct: 693 GHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSK 752
Query: 517 EIYDALESM 525
EIY+ L+S+
Sbjct: 753 EIYEMLKSL 761
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 164/381 (43%), Gaps = 87/381 (22%)
Query: 113 NQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVN--SYSRSGNDIGIAR 170
N Y L +C ++ + R VH Q G + VV L+ SY R+ +D A
Sbjct: 80 NPKFYISALVNCRNLTQVR---QVHAQASVHGMLENIVVANKLIYFYSYYRALDD---AY 133
Query: 171 KLFDEMSDRNVVSWTAMISGYTRVGD---------------------------------- 196
LFD M R+ VSW+ M+ G+ +VGD
Sbjct: 134 GLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLK 193
Query: 197 ---------------IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
I++A LFD M +RD+ W +I G + G ++++ F +M E
Sbjct: 194 NLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREE 253
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+ P++V +V + A G + ++I Y+ R LD + A+IDMY KCG +
Sbjct: 254 ---GVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCV 310
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+ AR FDR +K + SW++MI ++ HGQ ++ +F M+ + PD +T SLL
Sbjct: 311 ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMML---SSGMLPDKITLASLL 367
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG-----------RAGRFEEAL 410
AC + + +T+ ++ Q +G L +L+ RA ++A
Sbjct: 368 YACINC----------RNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRA--LDDAY 415
Query: 411 EVVKGMKIEPDEVVWGSLLNG 431
+ GM + D V W ++ G
Sbjct: 416 GLFDGMCVR-DSVSWSVMVGG 435
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/503 (19%), Positives = 208/503 (41%), Gaps = 84/503 (16%)
Query: 10 QTLNQQV-LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFI 68
Q LN + ++ L C ++ ++Q+ + + G + A KL+ F + + L A +
Sbjct: 77 QRLNPKFYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRA-LDDAYGL 135
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV- 127
FD + ++ ++ M+ +A + + F +R+++R G +P+ + P V+++C D+
Sbjct: 136 FDGMCVRDSVSWSVMVGGFAKVGDYIN-CFGTFRELIRCG-ARPDNYTLPFVIRACRDLK 193
Query: 128 -----LESRGTKMVHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSD 178
L K + + F++ V T ++ Y+ G + LF++M +
Sbjct: 194 NLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGK-ANESLVLFEKMRE 252
Query: 179 RNVVS---------------------------------------WTAMISGYTRVGDIKN 199
VV TAMI Y + G +++
Sbjct: 253 EGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVES 312
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
A +FD M +++V +W+++IA +G A+ FR M +S + P+++TL L A
Sbjct: 313 AREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMM---LSSGMLPDKITLASLLYA 369
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSW 319
+ L + +H +G+ + ++N L+ Y +L +A FD + SW
Sbjct: 370 CINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSW 429
Query: 320 NSMINSFALHGQSENSICVFEEMMRC-------------------------QDHNIRPDG 354
+ M+ FA G N F E++RC ++ + PD
Sbjct: 430 SVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDK 489
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
V ++++ AC G + + R + + + + + ++D+ + G E A E+
Sbjct: 490 VAMVTVVFACAKLGAMHKARTIDDYIQRK-KFQLDVILGTAMIDMHAKCGCVESAREIFD 548
Query: 415 GMKIEPDEVVWGSLLNGCKIYGR 437
M+ E + + W +++ +G+
Sbjct: 549 RME-EKNVISWSAMIAAYGYHGQ 570
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 32/251 (12%)
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
+SA+ + L + +H +G+ + ++N LI Y +L +A FD +
Sbjct: 85 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC------------ 364
SW+ M+ FA G N F E++RC RPD T ++ AC
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFRELIRC---GARPDNYTLPFVIRACRDLKNLQMALVD 201
Query: 365 --THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE--- 419
+E R F M E + + ++ G+ E+L + + M+ E
Sbjct: 202 MYVKCREIEDARFLFDKMQ-----ERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 256
Query: 420 PDEVVWGSLLNGCKIYGRTDFA----EFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
PD+V +++ C G A ++ +K ++D G + ++Y + G +
Sbjct: 257 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVI---LGTAMIDMYAKCGCVESA 313
Query: 476 RKVRKMLKDRN 486
R++ ++++N
Sbjct: 314 REIFDRMEEKN 324
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 295/578 (51%), Gaps = 81/578 (14%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
++++ H HL Q+ + L G F KLV + L + YAR +FD P+
Sbjct: 61 SLIDNSTHKRHLDQIHNRLVISGLQHNGFLMTKLVNGSS-NLGQICYARKLFDEFCYPDV 119
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+++ A+I +Y+ + + +YR M R P+ F +P+VLK+C ++L+ + ++H
Sbjct: 120 FMWNAIIRSYSRNNMYRDTV-EMYRWM-RWTGVHPDGFTFPYVLKACTELLDFGLSCIIH 177
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIAR--------------------------- 170
QI+K GF V+ LV Y++ G+ IG+A+
Sbjct: 178 GQIIKYGFGSDVFVQNGLVALYAKCGH-IGVAKVVFDGLYHRTIVSWTSIISGYAQNGKA 236
Query: 171 ----KLFDEMSDRNV-VSWTAMIS---GYTRVGDIKN----------------------- 199
++F +M + V W A++S YT V D++
Sbjct: 237 VEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISL 296
Query: 200 ------------AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
A S FD M +V WN++I+G +NG +A++ F M +S NI+
Sbjct: 297 TAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYM---ISRNIK 353
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P+ VT+ A+ A G L+L + + YV ++ D F++ +LIDMY KCGS++ ARR
Sbjct: 354 PDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRV 413
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FDRNS K + W++MI + LHGQ +I ++ M + + P+ VTFI LL AC H
Sbjct: 414 FDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVM---KQAGVFPNDVTFIGLLTACNHS 470
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GLV++G F M K + I P+ EHY C+VDLLGRAG EA + + IEP VWG+
Sbjct: 471 GLVKEGWELFHCM-KDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGA 529
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LL+ CKIY E+A KL +DP N G+ + L+N+Y WD V VR +++++
Sbjct: 530 LLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGL 589
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K G S IE++ ++ FH DK+HP +EI+D L+ +
Sbjct: 590 NKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRL 627
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 141/297 (47%), Gaps = 19/297 (6%)
Query: 157 NSYSRSGNDIGIARKLFDEMSDRNVVS--------WTAMISGYTRVGDIKNAASLFDSMP 208
+S+ S D ++ D++ +R V+S T +++G + +G I A LFD
Sbjct: 56 DSFYASLIDNSTHKRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFC 115
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
DV WN++I ++N ++ D + +R M + P+ T L A L
Sbjct: 116 YPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWT---GVHPDGFTFPYVLKACTELLDFGL 172
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
+IHG + + G D F+ N L+ +Y KCG + A+ FD + + SW S+I+ +A
Sbjct: 173 SCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQ 232
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
+G++ ++ +F +M +++ ++PD + +S+L A T +EQGR+ + K +E
Sbjct: 233 NGKAVEALRMFSQM---RNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKM-GLED 288
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
+ L + G A MK + ++W ++++G Y + AE AV
Sbjct: 289 EPALLISLTAFYAKCGLVTVAKSFFDQMK-TTNVIMWNAMISG---YAKNGHAEEAV 341
>gi|297824523|ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325983|gb|EFH56403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 176/548 (32%), Positives = 293/548 (53%), Gaps = 73/548 (13%)
Query: 43 QTNFYAFKLVRFCTLKLSNLTYARFIFDHLT-TPNTYLYTAMITAYASQPAHASSAFSLY 101
+TN F + + YAR +FD +++L +MI AY + H + +F+ Y
Sbjct: 7 ETNVQIFTKFLVISASAVGIGYARKLFDQRPHREDSFLCNSMIKAYL-ETRHYNDSFAFY 65
Query: 102 RDMVRRGQPQPNQFIYPHVLKSC----------------------PDVLESRGTKMVHTQ 139
RD+ + P+ F + + KSC D+ S G ++ +
Sbjct: 66 RDLRKETCLAPDNFTFTTMTKSCTLSMCVYQGLQLHSQIWRSGFCADMYVSTGVVDMYAK 125
Query: 140 IVKSG------------------------------------FEQYP-----VVETALVNS 158
K G F+Q P V+ A+++
Sbjct: 126 FGKMGCARNVFDEMPQRSEVSWTALICGYVRFGELDLASKLFDQMPQVKDVVIYNAMMDG 185
Query: 159 YSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSV 218
+ +SG D+ AR+LFDEM+ + V++WT MI GY DI +A LFD+MP+R++ +WN++
Sbjct: 186 FVKSG-DMTSARRLFDEMTHKTVITWTTMIHGYCNSNDIDSARKLFDAMPERNLVSWNTM 244
Query: 219 IAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR 278
I G QN +AI F+ M + + ++ P+ VT++ L AI TG L LG+ H +V R
Sbjct: 245 IGGYCQNKQPQEAIRLFQEM--QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQR 302
Query: 279 NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICV 338
LD + A++DMY KCG +++A+R FD +K++ SWN+MI+ +AL+G + ++ +
Sbjct: 303 KNLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAHAALDL 362
Query: 339 FEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVD 398
F M + + +PD +T +++++AC HGGLVE+GR +F++M K + + +IEHYGC+VD
Sbjct: 363 FLTMAKEE----KPDEITMLAVISACNHGGLVEEGRKWFQMMRK-FGLNAKIEHYGCMVD 417
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGY 458
LLGRAG ++A ++ M +P+ ++ S L+ C Y + AE +KK +E++P N G
Sbjct: 418 LLGRAGNLKQAEHLITNMPFKPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGN 477
Query: 459 GIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
++L N+Y +WD+ V+ M++ A K GCS IE++ V +F S D THP + I
Sbjct: 478 YVLLRNLYAADKRWDDFGMVKNMMRKNEAKKEVGCSLIEINYIVSEFISGDTTHPHRQSI 537
Query: 519 YDALESMV 526
+ LE ++
Sbjct: 538 HLVLEKLL 545
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/467 (36%), Positives = 265/467 (56%), Gaps = 45/467 (9%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K +L AR +F+ ++ N + AMITAY + +A + ++ +++ G +P+ +
Sbjct: 454 KCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKY-DNAVATFQALLKEG-IKPDSSTF 511
Query: 118 PHVLKSC--PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
+L C PD LE K V + I+++GFE +D+ I
Sbjct: 512 TSILNVCKSPDALEL--GKWVQSLIIRAGFE-----------------SDLHI------- 545
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
RN A++S + GD+ +A +LF+ MP+RD+ +WN++IAG Q+G A +F
Sbjct: 546 ---RN-----ALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYF 597
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
+ M ++P+Q+T L+A L G+ +H + LD D + LI MY
Sbjct: 598 KMMQ---ESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMY 654
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCGS+ +A F KK + SW SMI +A HG+ + ++ +F +M Q ++PD +
Sbjct: 655 TKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQM---QQEGVKPDWI 711
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF+ L+AC H GL+++G +F+ M K + IEP++EHYGC+VDL GRAG EA+E +
Sbjct: 712 TFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINK 770
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M+++PD +WG+LL C+++ + AE +K +E+DPN+ G ++L+NIY G W EV
Sbjct: 771 MQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEV 830
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
K+RK++ DR K PG SWIEVD +VH F S DKTHP+ EEI+ L
Sbjct: 831 TKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAEL 877
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 191/413 (46%), Gaps = 47/413 (11%)
Query: 31 QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQ 90
+L S + G F L+ +K + A +F++L + +T+MIT A
Sbjct: 226 ELFSLILNAGWDTDLFVGTALINM-HIKCGGVDDALKVFNNLPRRDLITWTSMITGLARH 284
Query: 91 PAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC--PDVLESRGTKMVHTQIVKSGFEQY 148
A +L++ M G QP++ + +LK+C P+ LE K VH ++ + G
Sbjct: 285 -RQFKQACNLFQVMEEEG-VQPDKVAFVSLLKACNHPEALEQ--GKRVHARMKEVGL--- 337
Query: 149 PVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP 208
D + TA++S YT+ G +++A +F+ +
Sbjct: 338 -----------------------------DTEIYVGTALLSMYTKCGSMEDALEVFNLVK 368
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
R+V +W ++IAG Q+G +A FF +M + I PN+VT + L A L+
Sbjct: 369 GRNVVSWTAMIAGFAQHGRMEEAFLFFNKM---IESGIEPNRVTFMSILGACSRPSALKQ 425
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
G+ IH + + G D + AL+ MY KCGSL +AR F+R SK+ + +WN+MI ++
Sbjct: 426 GRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQ 485
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
H + +N++ F+ +++ I+PD TF S+LN C +E G+ L+ + E
Sbjct: 486 HEKYDNAVATFQALLK---EGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRA-GFES 541
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+ LV + G A+ + M E D V W +++ G +G FA
Sbjct: 542 DLHIRNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWNTIIAGFVQHGENQFA 593
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 207/444 (46%), Gaps = 50/444 (11%)
Query: 43 QTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYR 102
Q + + + ++ K N A+ IFD + + Y + ++ Y Q AF L+
Sbjct: 136 QPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYV-QHRRYEEAFRLHE 194
Query: 103 DMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRS 162
MV+ G +P+++ + ++L +C D + + I+ +G++ V TAL+N +
Sbjct: 195 QMVQDG-VKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMH--- 250
Query: 163 GNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC 222
+ G + +A +F+++P RD+ W S+I G
Sbjct: 251 -----------------------------IKCGGVDDALKVFNNLPRRDLITWTSMITGL 281
Query: 223 TQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLD 282
++ F A + F+ M E ++P++V V L A H L+ GK +H + GLD
Sbjct: 282 ARHRQFKQACNLFQVMEEE---GVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLD 338
Query: 283 LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM 342
+ ++ AL+ MY KCGS+++A F+ + + SW +MI FA HG+ E + F +M
Sbjct: 339 TEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKM 398
Query: 343 MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA-YFKLMTKTYRIEPQIEHYGCLVDLLG 401
+ + I P+ VTF+S+L AC+ ++QGR + +++ Y + ++ L+ +
Sbjct: 399 I---ESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVR--TALLSMYA 453
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGYG 459
+ G +A V + + + + V W +++ + + D A + L++ I P++ +
Sbjct: 454 KCGSLMDARNVFERIS-KQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFT 512
Query: 460 IMLANIYG----ELGKWDEVRKVR 479
+L ELGKW + +R
Sbjct: 513 SILNVCKSPDALELGKWVQSLIIR 536
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/504 (24%), Positives = 223/504 (44%), Gaps = 81/504 (16%)
Query: 17 LAILERCNHINHLKQ---LQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
+++L+ CNH L+Q + + + +G + L+ T K ++ A +F+ +
Sbjct: 310 VSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYT-KCGSMEDALEVFNLVK 368
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
N +TAMI +A Q AF + M+ G +PN+ + +L +C +
Sbjct: 369 GRNVVSWTAMIAGFA-QHGRMEEAFLFFNKMIESG-IEPNRVTFMSILGACSRPSALKQG 426
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+ +H +I+K+G+ ++D V TA++S Y +
Sbjct: 427 RQIHDRIIKAGY------------------------------ITDDRVR--TALLSMYAK 454
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
G + +A ++F+ + ++V AWN++I Q+ + +A++ F+ + + + I+P+ T
Sbjct: 455 CGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQAL---LKEGIKPDSSTF 511
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
L+ L+LGK + + R G + D I NAL+ M+ CG L A F+ +
Sbjct: 512 TSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPE 571
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ L SWN++I F HG+++ + F+ M Q+ ++PD +TF LLNAC + +G
Sbjct: 572 RDLVSWNTIIAGFVQHGENQFAFDYFKMM---QESGVKPDQITFTGLLNACASPEALTEG 628
Query: 374 RAYFKLMTK----------------------------TYRIEPQIEHYGCLVDLLGRA-- 403
R L+T+ + P+ Y + G A
Sbjct: 629 RRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQH 688
Query: 404 GRFEEALEVVKGMK---IEPDEVVWGSLLNGCKIYG--RTDFAEFAVKKLIEIDPNNGGY 458
GR +EALE+ M+ ++PD + + L+ C G + F K I+P Y
Sbjct: 689 GRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKDFNIEPRMEHY 748
Query: 459 GIMLANIYGELGKWDE-VRKVRKM 481
G M+ +++G G E V + KM
Sbjct: 749 GCMV-DLFGRAGLLHEAVEFINKM 771
>gi|42567862|ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g15300
gi|332004762|gb|AED92145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 191/545 (35%), Positives = 287/545 (52%), Gaps = 49/545 (8%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARF 67
++T N++ + + C +I LKQ+ + + G +L+ +L + L YA
Sbjct: 8 DRTTNRRRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHK 67
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + P+ + ++ A Q SLY +M +RG P+++ + VLK+C
Sbjct: 68 LFDEIPKPDVSICNHVLRGSA-QSMKPEKTVSLYTEMEKRG-VSPDRYTFTFVLKACSK- 124
Query: 128 LESRGTKMV-HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
LE R H ++V+ GF V+ AL+ ++ G D+GIA +LFD+ + + V+W++
Sbjct: 125 LEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCG-DLGIASELFDDSAKAHKVAWSS 183
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC----------------------TQ 224
M SGY + G I A LFD MP +D AWN +I GC T
Sbjct: 184 MTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTW 243
Query: 225 NGLFS---------DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGY 275
N + S +A+ F+ M P+ VT++ LSA G L+ GK +H Y
Sbjct: 244 NAMISGYVNCGYPKEALGIFKEMR---DAGEHPDVVTILSLLSACAVLGDLETGKRLHIY 300
Query: 276 VYRNG-----LDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG 330
+ + + + I NALIDMY KCGS+ A F + L++WN++I ALH
Sbjct: 301 ILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH- 359
Query: 331 QSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQI 390
+E SI +FEEM R + + P+ VTFI ++ AC+H G V++GR YF LM Y IEP I
Sbjct: 360 HAEGSIEMFEEMQRLK---VWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNI 416
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE 450
+HYGC+VD+LGRAG+ EEA V+ MKIEP+ +VW +LL CKIYG + ++A +KL+
Sbjct: 417 KHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLS 476
Query: 451 IDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDK 510
+ + G ++L+NIY G+WD V+KVRKM D K G S IE D L
Sbjct: 477 MRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLS 536
Query: 511 THPRT 515
+ P +
Sbjct: 537 SEPES 541
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/518 (33%), Positives = 271/518 (52%), Gaps = 80/518 (15%)
Query: 43 QTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYR 102
+ N ++ ++ L + AR +FD + + +TAM++ Y Q + A +L+
Sbjct: 140 ERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYC-QAGRITEARALFD 198
Query: 103 DMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRS 162
+M +R V TA+++ Y+++
Sbjct: 199 EMPKRNV----------------------------------------VSWTAMISGYAQN 218
Query: 163 GNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA-------- 214
G ++ +ARKLF+ M +RN VSWTAM+ GY + G +++AA LF++MP+ V A
Sbjct: 219 G-EVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGF 277
Query: 215 -----------------------WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
W+++I QN +A+S FR M + +RPN
Sbjct: 278 GQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREM---LWRGVRPNYP 334
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
+++ L+ +L G+ +H + R D+D F +ALI MY KCG+L +A+R F
Sbjct: 335 SVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF 394
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K + WNSMI +A HG E ++ +F +M + + PDG+T+I L AC++ G V+
Sbjct: 395 EPKDIVMWNSMITGYAQHGLGEQALGIFHDM---RLAGMSPDGITYIGALTACSYTGKVK 451
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+GR F MT I P EHY C+VDLLGR+G EEA +++K M +EPD V+WG+L+
Sbjct: 452 EGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C+++ + AEFA KKL+E++P N G ++L++IY +G+W++ K+RK + RN K+P
Sbjct: 512 CRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSP 571
Query: 492 GCSWIEVDKQVHQFHSLDK-THPRTEEIYDALESMVAL 528
GCSWIE DK+VH F S D HP I LE + L
Sbjct: 572 GCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGL 609
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 191/447 (42%), Gaps = 45/447 (10%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+ N+ AR F+ + T Y A++ Y +A L+R M R N I
Sbjct: 29 RAGNIEGARAAFEAMPLRTTASYNALLAGYFRN-RLPDAALGLFRRMPSRDLASYNALIS 87
Query: 118 PHVLK--SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
L+ + PD + + F V T+L+ Y R G + A +LF +
Sbjct: 88 GLSLRRQTLPDAAAA---------LASIPFPPSVVSFTSLLRGYVRHGL-LADAIRLFQQ 137
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
M +RN VS+T ++ G G + A LFD MPDRDV AW ++++G Q G ++A + F
Sbjct: 138 MPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALF 197
Query: 236 RRMGME--------VSDNIRPNQVTLVCAL-------SAIGHTGML----QLGKVIHGYV 276
M +S + +V L L + + T ML Q G V
Sbjct: 198 DEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAE 257
Query: 277 YRNGLDLDSFIS-NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
N + + NA++ +G+ G + A+ F++ ++ +W++MI ++ + +
Sbjct: 258 LFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEA 317
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ F EM+ +RP+ + IS+L C +++ GR M + + +
Sbjct: 318 LSTFREMLW---RGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRC-SFDMDVFAVSA 373
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVV-WGSLLNGCKIYGRTDFAE--FAVKKLIEID 452
L+ + + G ++A V EP ++V W S++ G +G + A F +L +
Sbjct: 374 LITMYIKCGNLDKAKRVFH--TFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMS 431
Query: 453 PNNGGY-GIMLANIYGELGKWDEVRKV 478
P+ Y G + A Y GK E R++
Sbjct: 432 PDGITYIGALTACSY--TGKVKEGREI 456
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 133/302 (44%), Gaps = 43/302 (14%)
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM------- 238
A I+ R G+I+ A + F++MP R ++N+++AG +N L A+ FRRM
Sbjct: 22 ARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLAS 81
Query: 239 ------GMEVSDNIRPNQVTLVCAL----SAIGHTGMLQLGKVIHGY------VYRNGLD 282
G+ + P+ + ++ S + T +L+ G V HG +++ +
Sbjct: 82 YNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLR-GYVRHGLLADAIRLFQQMPE 140
Query: 283 LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM 342
+ L+ G + EARR FD + + +W +M++ + G+ + +F+EM
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200
Query: 343 MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG- 401
+ N+ V++ ++++ G V R F++M P+ L+G
Sbjct: 201 PK---RNV----VSWTAMISGYAQNGEVNLARKLFEVM-------PERNEVSWTAMLVGY 246
Query: 402 -RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI 460
+AG E+A E+ M P +++ G G D A+ +K+ E D +G +
Sbjct: 247 IQAGHVEDAAELFNAMPEHPVAAC-NAMMVGFGQRGMVDAAKTVFEKMCERD--DGTWSA 303
Query: 461 ML 462
M+
Sbjct: 304 MI 305
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/452 (35%), Positives = 258/452 (57%), Gaps = 11/452 (2%)
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
N + MI+ + ++ + ++++M G +P+ VL + D+
Sbjct: 174 NLVSWNGMISGFNRSGSYLDAVL-MFQNMHLEGL-KPDGTSVSSVLPAVGDLDMPLMGIQ 231
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+H ++K G V +AL++ Y + ++ +F+EM + +V + A+++G +R G
Sbjct: 232 IHCYVIKQGLGPDKFVVSALIDMYGKCACASEMS-GVFNEMDEVDVGACNALVTGLSRNG 290
Query: 196 DIKNAASLFDSMP--DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
+ NA +F D +V +W S+IA C+QNG +A+ FR M +E ++PN VT+
Sbjct: 291 LVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIE---GVKPNSVTI 347
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
C L A G+ L GK H + RNG+ D ++ +ALIDMY KCG + +R FD
Sbjct: 348 PCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPN 407
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ L SWNS++ +A+HG++ +I +FE M RC +PD V+F +L+ACT GGL E+G
Sbjct: 408 RNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQ---KPDHVSFTCVLSACTQGGLTEEG 464
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
YF M++ + +E ++EHY C+V LLGR+GR EEA ++K M EPD VWG+LL+ C+
Sbjct: 465 WFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCR 524
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
++ R D E A K++ E++P N G I+L+NIY W EV VR M++ R K PG
Sbjct: 525 VHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGY 584
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
SWIE+ +VH + D +HP+ +I + L +
Sbjct: 585 SWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKL 616
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 167/366 (45%), Gaps = 50/366 (13%)
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
P+ + P V+K+C + + K +H + SG VV ++L++ Y + + + AR
Sbjct: 72 PDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQF-DHLKDARN 130
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVP----AWNSVIAGCTQNGL 227
+FD++ VV+ +A+IS + R G +K LF D V +WN +I+G ++G
Sbjct: 131 VFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGS 190
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
+ DA+ F+ M +E ++P+ ++ L A+G M +G IH YV + GL D F+
Sbjct: 191 YLDAVLMFQNMHLE---GLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFV 247
Query: 288 SNALIDMYGKCGSLKEARRAFD---------------------------------RNSKK 314
+ALIDMYGKC E F+ +
Sbjct: 248 VSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDL 307
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ SW SMI S + +G+ ++ +F EM Q ++P+ VT LL AC + + G+
Sbjct: 308 NVVSWTSMIASCSQNGKDMEALELFREM---QIEGVKPNSVTIPCLLPACGNIAALLHGK 364
Query: 375 AY--FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
A F L + + L+D+ + GR A + M + V W SL+ G
Sbjct: 365 AAHCFSLRNGIFN---DVYVGSALIDMYAKCGRM-LASRLCFDMMPNRNLVSWNSLMAGY 420
Query: 433 KIYGRT 438
++G+T
Sbjct: 421 AMHGKT 426
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 108/279 (38%), Gaps = 78/279 (27%)
Query: 228 FSDAISFFRRM---GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
F I F M G+ + P + ALSA LQ GK +H + +GL LD
Sbjct: 55 FGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSA------LQTGKQMHCFALVSGLGLD 108
Query: 285 SFISNALIDMYGKCGSLKEARRAFD---------------RNSKK--------------- 314
S + ++L+ MY + LK+AR FD R ++K
Sbjct: 109 SVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRD 168
Query: 315 -----RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC----- 364
L SWN MI+ F G +++ +F+ M ++PDG + S+L A
Sbjct: 169 LGVELNLVSWNGMISGFNRSGSYLDAVLMFQNM---HLEGLKPDGTSVSSVLPAVGDLDM 225
Query: 365 ------THGGLVEQGRAYFKL-----------------MTKTYRIEPQIEHYGC--LVDL 399
H +++QG K M+ + +++ C LV
Sbjct: 226 PLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTG 285
Query: 400 LGRAGRFEEALEVVKGMK-IEPDEVVWGSLLNGCKIYGR 437
L R G + ALEV K K ++ + V W S++ C G+
Sbjct: 286 LSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGK 324
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 258/457 (56%), Gaps = 15/457 (3%)
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS---CPDVLESRGTKM 135
L+ A+I A A A A LY ++R G P P +LKS P V +RG +
Sbjct: 173 LHNALIRALAGS-ARPHLALPLYAHLLRAGH-HPTPHTLPSLLKSLALSPAVPGARGLAL 230
Query: 136 -VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
VH VK G + +V AL+ ++ + A L + + ++ +I+ Y R
Sbjct: 231 AVHAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARA 290
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + +A +LFD MP R+ +W++++ G Q G +A+ F RM +D +RP+ LV
Sbjct: 291 GRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQ---ADGVRPDDTVLV 347
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
L+A G+L+ GK +HGY+ N + + F+ AL+DMY KCG ++ A F +K
Sbjct: 348 GVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEK 407
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ +W +MI A+HG+ ++ +F +M R ++PD + FI L ACTH GLV++GR
Sbjct: 408 NVLAWTTMIKGLAMHGRGSEALELFSQMERL---GVKPDDIAFIGALCACTHTGLVDKGR 464
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
F M + Y I+P+IEHYGC+VDLL R G EA E+V+ M ++PD ++WG+L+ GC+
Sbjct: 465 ELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRF 524
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+ + AE+ VK IE++P+ G ++L NIY G+ R++R +++++ KTPGCS
Sbjct: 525 HKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCS 584
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEI---YDALESMVAL 528
+E+ +HQF D +HP EEI +D ++S + L
Sbjct: 585 TVEIKGVIHQFIVGDLSHPFIEEILSKWDEIDSRIRL 621
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 113/278 (40%), Gaps = 39/278 (14%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+ +T AR +FD + N ++AM+ Y Q A L+ M G +P+ +
Sbjct: 289 RAGRVTDARALFDEMPARNAVSWSAMVNGYV-QAGDGREALGLFARMQADGV-RPDDTVL 346
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
VL +C + K VH + + + TALV+ Y++ G ++ +A ++F M
Sbjct: 347 VGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCG-EMQLAMEVFKVMK 405
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
++NV++WT MI G G A LF M R
Sbjct: 406 EKNVLAWTTMIKGLAMHGRGSEALELFSQM----------------------------ER 437
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK-VIHGYVYRNGLDLDSFISNALIDMYG 296
+G ++P+ + + AL A HTG++ G+ + V + G+ ++D+
Sbjct: 438 LG------VKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLA 491
Query: 297 KCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSE 333
+ G L EAR ++ K W +++ H E
Sbjct: 492 RNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVE 529
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 258/457 (56%), Gaps = 15/457 (3%)
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS---CPDVLESRGTKM 135
L+ A+I A A A A LY ++R G P P +LKS P V +RG +
Sbjct: 173 LHNALIRALAGS-ARPHLALPLYAHLLRAGH-HPTPHTLPSLLKSLALSPAVPGARGLAL 230
Query: 136 -VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
VH VK G + +V AL+ ++ + A L + + ++ +I+ Y R
Sbjct: 231 AVHAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARA 290
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + +A +LFD MP R+ +W++++ G Q G +A+ F RM +D +RP+ LV
Sbjct: 291 GRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQ---ADGVRPDDTVLV 347
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
L+A G+L+ GK +HGY+ N + + F+ AL+DMY KCG ++ A F +K
Sbjct: 348 GVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEK 407
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ +W +MI A+HG+ ++ +F +M R ++PD + FI L ACTH GLV++GR
Sbjct: 408 NVLAWTTMIKGLAMHGRGSEALELFSQMERL---GVKPDDIAFIGALCACTHTGLVDKGR 464
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
F M + Y I+P+IEHYGC+VDLL R G EA E+V+ M ++PD ++WG+L+ GC+
Sbjct: 465 ELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRF 524
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+ + AE+ VK IE++P+ G ++L NIY G+ R++R +++++ KTPGCS
Sbjct: 525 HKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCS 584
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEI---YDALESMVAL 528
+E+ +HQF D +HP EEI +D ++S + L
Sbjct: 585 TVEIKGVIHQFIVGDLSHPFIEEILSKWDEIDSRIRL 621
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 113/278 (40%), Gaps = 39/278 (14%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+ +T AR +FD + N ++AM+ Y Q A L+ M G +P+ +
Sbjct: 289 RAGRVTDARALFDEMPARNAVSWSAMVNGYV-QAGDGREALGLFARMQADGV-RPDDTVL 346
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
VL +C + K VH + + + TALV+ Y++ G ++ +A ++F M
Sbjct: 347 VGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCG-EMQLAMEVFKVMK 405
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
++NV++WT MI G G A LF M R
Sbjct: 406 EKNVLAWTTMIKGLAMHGRGSEALELFSQM----------------------------ER 437
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK-VIHGYVYRNGLDLDSFISNALIDMYG 296
+G ++P+ + + AL A HTG++ G+ + V + G+ ++D+
Sbjct: 438 LG------VKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLA 491
Query: 297 KCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSE 333
+ G L EAR ++ K W +++ H E
Sbjct: 492 RNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVE 529
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 165/509 (32%), Positives = 270/509 (53%), Gaps = 54/509 (10%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L ++ AR +FD + N + MI +Y + + ++ M +P+ + +P
Sbjct: 87 LKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGE-GVKVFGTMCG-CNVRPDHYTFP 144
Query: 119 HVLKSCPDVLESRGT----KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
VLK+C GT + +H K G V LV+ Y + G + AR + D
Sbjct: 145 CVLKAC----SCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGF-LSEARLVLD 199
Query: 175 EMSDRNVVSWTAMISGY-------------------------------------TRVGDI 197
EMS R+VVSW +++ GY T ++
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
+F M + + +WN +I +N + +A+ + RM +D P+ V++ L
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRME---ADGFEPDAVSITSVL 316
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
A G T L LGK IHGY+ R L + + NALIDMY KCG L++AR F+ + +
Sbjct: 317 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV 376
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
SW +MI+++ G+ +++ +F ++ QD + PD + F++ L AC+H GL+E+GR+ F
Sbjct: 377 SWTAMISAYGFSGRGCDAVALFSKL---QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCF 433
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
KLMT Y+I P++EH C+VDLLGRAG+ +EA ++ M +EP+E VWG+LL C+++
Sbjct: 434 KLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSD 493
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
TD A KL ++ P GY ++L+NIY + G+W+EV +R ++K + K PG S +E
Sbjct: 494 TDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVE 553
Query: 498 VDKQVHQFHSLDKTHPRTEEIYDALESMV 526
V++ +H F D++HP+++EIY L+ +V
Sbjct: 554 VNRIIHTFLVGDRSHPQSDEIYRELDVLV 582
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 171/393 (43%), Gaps = 72/393 (18%)
Query: 110 PQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIA 169
PQ F+ VL + PD+ R + VH++I+ R + +G+
Sbjct: 38 PQETVFLLGQVLDTYPDI---RTLRTVHSRIILEDL---------------RCNSSLGVK 79
Query: 170 RKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
++ Y + D+ +A +FD +P+R+V N +I NG +
Sbjct: 80 -----------------LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYG 122
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
+ + F G N+RP+ T C L A +G + +G+ IHG + GL F+ N
Sbjct: 123 EGVKVF---GTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGN 179
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
L+ MYGKCG L EAR D S++ + SWNS++ +A + + ++++ V EM +
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM---ESVK 236
Query: 350 IRPDGVTFISLLNAC---THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRF 406
I D T SLL A T ++ +FK+ K+ + + ++ + +
Sbjct: 237 ISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKS------LVSWNVMIGVYMKNAMP 290
Query: 407 EEALEVVKGMK---IEPDEVVWGSLLNGC----------KIYGRTDFAEFAVKKLIEIDP 453
EA+E+ M+ EPD V S+L C KI+G + + L+E
Sbjct: 291 VEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE--- 347
Query: 454 NNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
N L ++Y + G ++ R V + +K R+
Sbjct: 348 -NA-----LIDMYAKCGCLEKARDVFENMKSRD 374
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 168/463 (36%), Positives = 266/463 (57%), Gaps = 40/463 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L AR +FD + N +TAMI+ Y SQ AS A L+ M+R +PN+F +
Sbjct: 57 KCECLGCARHVFDEMRERNVVSWTAMISGY-SQRGFASEALHLFVQMLR-SDTEPNEFTF 114
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
VL SC + +H+ I K +E + V ++L++ Y+++G I AR +F+ +
Sbjct: 115 ATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGR-IHEARGVFECLP 173
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+R+VVS TA+ISGY Q GL +A+ F R
Sbjct: 174 ERDVVSCTAIISGY-------------------------------AQLGLDEEALELFCR 202
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
+ E + N VT L+A+ L GK +H +V R L + N+LIDMY K
Sbjct: 203 LQRE---GMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSK 259
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG+L AR+ F+ + + SWN+M+ ++ HG+ + +F ++MR +++ ++PD VTF
Sbjct: 260 CGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLF-KLMR-EENKVKPDSVTF 317
Query: 358 ISLLNACTHGGLVEQGRAYF-KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+++L+ C+HGGL ++G F ++M IE IEHYGC++DLLGRAGR EEA E++K M
Sbjct: 318 LAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKM 377
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
EP +WGSLL C+++ T+ EF +L+EI+P N G ++L+N+Y G+W++VR
Sbjct: 378 PFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVR 437
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
VR+++ ++ K PG SWIE+D+ +H F++ D++HPR EE++
Sbjct: 438 NVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVF 480
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 149/325 (45%), Gaps = 48/325 (14%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
Y +L C + R + VH ++K+ + + T L+ Y++ +G AR +FDEM
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKC-ECLGCARHVFDEM 71
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+RNVVSWTAMISGY +Q G S+A+ F
Sbjct: 72 RERNVVSWTAMISGY-------------------------------SQRGFASEALHLFV 100
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+M + + PN+ T LS+ +LG+ IH ++++ + F+ ++L+DMY
Sbjct: 101 QM---LRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYA 157
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
K G + EAR F+ ++ + S ++I+ +A G E ++ +F R Q + + VT
Sbjct: 158 KAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELF---CRLQREGMSSNYVT 214
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY----GCLVDLLGRAGRFEEALEV 412
+ SLL A + ++ G+ ++ + ++ Y L+D+ + G A ++
Sbjct: 215 YASLLTALSGLAALDHGK-----QVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKI 269
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGR 437
M + + W ++L G +G+
Sbjct: 270 FNNMPVRT-VISWNAMLVGYSKHGK 293
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 281/525 (53%), Gaps = 49/525 (9%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTN--FYAFKLVRFCTLKLSNLTYA-- 65
+ L +++++ RC + L+ + LT L + F KL+ C +
Sbjct: 64 EALEAHIVSLVRRCPGLLALRSAHAHLTRLRLPRLTAAFALSKLLASCVSAPAPAAAQAA 123
Query: 66 -----RFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
R +FD + P + Y ++I A + A ++ A ++YR M+R G P+PN F
Sbjct: 124 ASSYARNLFDQIPDPTAFCYNSLIRALPA--AGSAPALAVYRRMLRAGSPRPNSFTLAFA 181
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
LK+C V + +H Q ++ G V+T L+N Y++ + +AR +FD M+
Sbjct: 182 LKACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKC-EQVALARTVFDGMAG-- 238
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
D+++ AW+++++G ++ G+ ++A+ FR M
Sbjct: 239 ----------------------------DKNLVAWSAMVSGYSRVGMVNEALGLFREMQ- 269
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ + P++VT+V +SA G L LGK +H Y+ R G+ +D +S ALIDMY KCG
Sbjct: 270 --AVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGL 327
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
++ AR FD +K +W++MI FA+HG E+++ +F M+ + +RP+ VTFI +
Sbjct: 328 IERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELK---VRPNNVTFIGV 384
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC H GLVE GR Y+ +M + I+P +E+YGC+VDLL R+G ++A V GM + P
Sbjct: 385 LSACAHSGLVEDGRRYWSIM-QNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSP 443
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
+ V+W +LL CK R D AE A K+L+E++P+N ++L+N+Y +WD V +R+
Sbjct: 444 NSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRR 503
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+K +N G S IE++ +H+F D +HP EI L M
Sbjct: 504 KMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLREM 548
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 172/518 (33%), Positives = 271/518 (52%), Gaps = 80/518 (15%)
Query: 43 QTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYR 102
+ N ++ ++ L + AR +FD + + +TAM++ Y Q + A +L+
Sbjct: 140 ERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYC-QAGRITEARALFD 198
Query: 103 DMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRS 162
+M +R V TA+++ Y+++
Sbjct: 199 EMPKRNV----------------------------------------VSWTAMISGYAQN 218
Query: 163 GNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA-------- 214
G ++ +ARKLF+ M +RN VSWTAM+ GY + G +++AA LF++MP+ V A
Sbjct: 219 G-EVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGF 277
Query: 215 -----------------------WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
W+++I QN +A+S FR M + +RPN
Sbjct: 278 GQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREM---LWRGVRPNYP 334
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
+++ L+ +L G+ +H + R D+D F +ALI MY KCG+L +A+R F
Sbjct: 335 SVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF 394
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K + WNSMI +A HG E ++ +F +M + + PDG+T+I L AC++ G V+
Sbjct: 395 EPKDIVMWNSMITGYAQHGLGEQALGIFHDM---RLAGMSPDGITYIGALTACSYTGKVK 451
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+GR F MT I P EHY C+VDLLGR+G EEA +++K M +EPD V+WG+L+
Sbjct: 452 EGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C+++ + AEFA KKL+E++P N G ++L++IY +G+W++ K+RK + RN K+P
Sbjct: 512 CRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSP 571
Query: 492 GCSWIEVDKQVHQFHSLDK-THPRTEEIYDALESMVAL 528
GCSWIE DK+VH F S D HP I LE + L
Sbjct: 572 GCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGL 609
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 191/447 (42%), Gaps = 45/447 (10%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+ N+ AR F+ + T Y A++ Y +A L+R M R N I
Sbjct: 29 RAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRL-PDAALGLFRRMPSRDLASYNALIS 87
Query: 118 PHVLK--SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
L+ + PD + + F V T+L+ Y R G + A +LF +
Sbjct: 88 GLSLRRQTLPDAAAA---------LASIPFPPSVVSFTSLLRGYVRHGL-LADAIRLFQQ 137
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
M +RN VS+T ++ G G + A LFD MPDRDV AW ++++G Q G ++A + F
Sbjct: 138 MPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALF 197
Query: 236 RRMGME--------VSDNIRPNQVTLVCAL-------SAIGHTGML----QLGKVIHGYV 276
M +S + +V L L + + T ML Q G V
Sbjct: 198 DEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAE 257
Query: 277 YRNGLDLDSFIS-NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
N + + NA++ +G+ G + A+ F++ ++ +W++MI ++ + +
Sbjct: 258 LFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEA 317
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ F EM+ +RP+ + IS+L C +++ GR M + + +
Sbjct: 318 LSTFREMLW---RGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRC-SFDMDVFAVSA 373
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVV-WGSLLNGCKIYGRTDFAE--FAVKKLIEID 452
L+ + + G ++A V EP ++V W S++ G +G + A F +L +
Sbjct: 374 LITMYIKCGNLDKAKRVFH--TFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMS 431
Query: 453 PNNGGY-GIMLANIYGELGKWDEVRKV 478
P+ Y G + A Y GK E R++
Sbjct: 432 PDGITYIGALTACSY--TGKVKEGREI 456
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 133/302 (44%), Gaps = 43/302 (14%)
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM------- 238
A I+ R G+I+ A + F++MP R ++N+++AG +N L A+ FRRM
Sbjct: 22 ARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLAS 81
Query: 239 ------GMEVSDNIRPNQVTLVCAL----SAIGHTGMLQLGKVIHGY------VYRNGLD 282
G+ + P+ + ++ S + T +L+ G V HG +++ +
Sbjct: 82 YNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLR-GYVRHGLLADAIRLFQQMPE 140
Query: 283 LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM 342
+ L+ G + EARR FD + + +W +M++ + G+ + +F+EM
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200
Query: 343 MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG- 401
+ N+ V++ ++++ G V R F++M P+ L+G
Sbjct: 201 PK---RNV----VSWTAMISGYAQNGEVNLARKLFEVM-------PERNEVSWTAMLVGY 246
Query: 402 -RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI 460
+AG E+A E+ M P +++ G G D A+ +K+ E D +G +
Sbjct: 247 IQAGHVEDAAELFNAMPEHPVAAC-NAMMVGFGQRGMVDAAKTVFEKMCERD--DGTWSA 303
Query: 461 ML 462
M+
Sbjct: 304 MI 305
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 186/540 (34%), Positives = 271/540 (50%), Gaps = 88/540 (16%)
Query: 47 YAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVR 106
Y ++ RFC +L NL A + + P+ L T Y S + S+
Sbjct: 71 YNIEICRFC--ELGNLRRAMELINQSPKPDLELRT-----YCSVLQLCADLKSIQDGRRI 123
Query: 107 RGQPQPNQFIYPHVLKS--------CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNS 158
Q N VL S C D+ E R +I + + L+N
Sbjct: 124 HSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGR-------RIFDKVANEKVFLWNLLMNG 176
Query: 159 YSRSGN------------DIGI-----ARKLFDEMSDRNVVSWTAMISGY---------- 191
Y++ GN ++GI ARKLFDE+ DR+V+SW +MISGY
Sbjct: 177 YAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGL 236
Query: 192 ---------------------------------TRVGDIKNAASLFDSMPDRDVPAWNSV 218
++ G++ +A +F++M +R V +W S+
Sbjct: 237 DLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSM 296
Query: 219 IAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR 278
IAG + GL ++ F M E ++ PN +T+ C L A L+ G+ IHG++ R
Sbjct: 297 IAGYAREGLSDMSVRLFHEMEKE---DLFPNSITMACILPACASLAALERGQEIHGHILR 353
Query: 279 NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICV 338
NG LD ++NAL+DMY KCG+L AR FD +K L SW MI + +HG +I
Sbjct: 354 NGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAA 413
Query: 339 FEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVD 398
F EM ++ I PD V+FIS+L AC+H GL+++G +F +M IEP+ EHY C+VD
Sbjct: 414 FNEM---RNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVD 470
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGY 458
LL RAG +A + +K M IEPD +WG+LL GC+IY AE + + E++P N GY
Sbjct: 471 LLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGY 530
Query: 459 GIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
++LANIY E KW+EV+K+R+ + R K PGCSWIE+ +VH F + D +HP +I
Sbjct: 531 YVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKI 590
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 168/488 (34%), Positives = 274/488 (56%), Gaps = 10/488 (2%)
Query: 39 LGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAF 98
LG S F V F ++ ++ AR +FD + + +I Y + A
Sbjct: 150 LGFSADVFVVNAGVHFWSVS-GSMVLARRLFDESPARDVVSWNTLIGGYV-RSGLPREAL 207
Query: 99 SLYRDMVRRGQP-QPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVN 157
L+ +V G+ +P++ + C + + K +H + G + A+++
Sbjct: 208 ELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMD 267
Query: 158 SYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNS 217
Y + G+ + +A+ +F+ + ++ VVSWT MI G+ R+G +++A LFD MP+RDV WN+
Sbjct: 268 MYVKCGS-LELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNA 326
Query: 218 VIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVY 277
++AG QN +AI+ F M + PN++T+V LSA G L++G +H Y+
Sbjct: 327 LMAGYVQNKQGKEAIALFHEMQ---ESKVDPNEITMVNLLSACSQLGALEMGMWVHHYID 383
Query: 278 RNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSIC 337
R+ L L + +L+DMY KCG++K+A F K +W +MI A HG ++ +I
Sbjct: 384 RHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIE 443
Query: 338 VFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLV 397
F+ M+ D ++PD +TFI +L+AC H GLV++GR +F LM + Y +E +++HY C++
Sbjct: 444 YFQRMI---DLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMI 500
Query: 398 DLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGG 457
DLLGRAG +EA ++V M ++PD VVWG+L C+++G E A KL+E+DP++ G
Sbjct: 501 DLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSG 560
Query: 458 YGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEE 517
++LAN+Y E + KVR M++ K PGCS IE++ VH+F DK+H T
Sbjct: 561 IYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTIA 620
Query: 518 IYDALESM 525
IYD L +
Sbjct: 621 IYDCLHGI 628
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 194/445 (43%), Gaps = 84/445 (18%)
Query: 56 TLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFS---------------- 99
T S+ A F +P L+ I A P ++S ++
Sbjct: 42 TSPFSDRLVAAFALSDPASPRPLLHALAILASLPSPPDSASPYNAAFRALSLCPHRHLVD 101
Query: 100 -----LYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETA 154
LYR ++ +P+ +P +LK+C + V + K GF V A
Sbjct: 102 RHCLPLYRALLCSSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNA 161
Query: 155 LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA 214
V+ +S SG+ + +AR+LFDE R+VVSW +I GY R
Sbjct: 162 GVHFWSVSGSMV-LARRLFDESPARDVVSWNTLIGGYVR--------------------- 199
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
+GL +A+ F R+ +E +RP++VT++ A+S G L+LGK +H
Sbjct: 200 ----------SGLPREALELFWRL-VEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHE 248
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
+V G+ + NA++DMY KCGSL+ A+ F+R K + SW +MI A G E+
Sbjct: 249 FVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMED 308
Query: 335 SICVFEEM----------------------------MRCQDHNIRPDGVTFISLLNACTH 366
+ +F+EM Q+ + P+ +T ++LL+AC+
Sbjct: 309 ARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQ 368
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
G +E G + + +++ + LVD+ + G ++A+ + K + + + + W
Sbjct: 369 LGALEMGMWVHHYIDR-HQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIP-DKNALTWT 426
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEI 451
+++ G +G D A +++I++
Sbjct: 427 AMICGLANHGHADEAIEYFQRMIDL 451
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 5/211 (2%)
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
S + RP+ +T L A G + G+V + G D F+ NA + + GS+
Sbjct: 114 SSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMV 173
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
ARR FD + + + SWN++I + G ++ +F ++ +RPD VT I ++
Sbjct: 174 LARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVE-DGKAVRPDEVTMIGAVS 232
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
C G +E G+ + + + + + ++D+ + G E A V + +I+
Sbjct: 233 GCAQMGDLELGKRLHEFV-DSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFE--RIDNKT 289
Query: 423 VV-WGSLLNGCKIYGRTDFAEFAVKKLIEID 452
VV W +++ G G + A ++ E D
Sbjct: 290 VVSWTTMIVGHARLGMMEDARMLFDEMPERD 320
>gi|357117491|ref|XP_003560501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Brachypodium distachyon]
Length = 652
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 182/523 (34%), Positives = 289/523 (55%), Gaps = 19/523 (3%)
Query: 16 VLAILERCNHINHLKQLQSFLT--TLGQSQTNFYAFKLVR---FCTLKLSNLTYARFIFD 70
+LA ++ + HL+ L + L L F +L+R + L YA +F
Sbjct: 40 LLAAVDSSPSLRHLRHLHALLIRLPLPPRSLPFILSRLLRRLAALPPPHAPLPYALSVFA 99
Query: 71 HLTTPNTYLYTAMITAYA-SQPAHASSAFSLYRDMVR--RGQPQPN-QFIYPHVLKSCPD 126
L+ P+ +L A++ +QP S F L+ ++R RG P F + + KS
Sbjct: 100 ALSPPDPFLAAALLRFALLTQPP--LSPFHLFSRILRTARGGELPFLPFAFSPLAKSAAA 157
Query: 127 VLESRGTKMVHT-QIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
+ H + GF+++ VE +L+ +Y G D+G ARK+FDEM ++V+ WT
Sbjct: 158 ARSLPAAQAAHAVSFLVGGFDKHRFVENSLIGAYIACG-DVGAARKVFDEMVVKDVICWT 216
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
+++ Y+R D+ +A +F P +D+ AW +++ G QN + A+ F RM +
Sbjct: 217 SIVVAYSRSRDMGSAEEVFGQCPVKDMVAWTAMVTGYAQNAMPMKALEVFDRM---TALG 273
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
I ++V+L A+SA G ++ + NG ++ + + L+DMY KCG + EA
Sbjct: 274 IGIDEVSLTGAISACAQLGAVKRAAWVQEIAEMNGFGMNVVVGSGLVDMYAKCGLIDEAC 333
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
+ FD +K + +++SM+ A HG++ +I +F++M+R D + P+ VTFI +L AC+
Sbjct: 334 KVFDGMQEKNVYTYSSMVVGLASHGRAREAIALFKDMVRRAD--VAPNHVTFIGVLTACS 391
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
H G+V GR YF M Y I P +HY C+VDLLGRAG +EAL++V+ M +EP VW
Sbjct: 392 HAGMVTDGRYYFAQMKDKYGILPSADHYTCMVDLLGRAGLVDEALDLVRSMTVEPHGGVW 451
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
G+LL C+I+G+T+ A+ A + L +++P G ++L+N GKWDEV KVRK+++ R
Sbjct: 452 GALLGACRIHGKTEVAKVAAEHLFKLEPEGIGNYVLLSNTLAAAGKWDEVSKVRKVMRSR 511
Query: 486 NAYKTPGCSWIE-VDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
K P SW E D VHQF + D +HPRT EI AL +VA
Sbjct: 512 RLKKVPAVSWFEGRDGLVHQFFAGDNSHPRTREIKKALLELVA 554
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/410 (39%), Positives = 246/410 (60%), Gaps = 9/410 (2%)
Query: 116 IYPHV-LKSCPDVLESRGT--KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKL 172
I+P + L + + RGT +H+ IV++G V +L+ +Y G + AR +
Sbjct: 68 IHPSLSLNAAAKIPHLRGTLGPQLHSVIVRAGLASDAHVSASLIQTYFSCGR-VASARSV 126
Query: 173 FDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAI 232
FD+ +D+++ W MISGY + G++ A LFD MP R+V +W +VI Q +A+
Sbjct: 127 FDQTTDKDIFCWNVMISGYVKSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAV 186
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALI 292
FRRM +V + I P+ V L+ LSA G G + LG+ +H +V R GL + NA+I
Sbjct: 187 EVFRRM--QVEEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAII 244
Query: 293 DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
DMY K G +++A F+ +K + +W ++I FALHG +I +F M + N+ P
Sbjct: 245 DMYVKLGCVRKAVEVFEGMDQKSVVTWTTVIAGFALHGLGLEAIEMFRRM---EMENVAP 301
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
+ VTF+++L+AC+H GL + GR YFK+M YRI+ ++EHYGC+VDLLGRAG EA ++
Sbjct: 302 NDVTFLAILSACSHVGLTDLGRWYFKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDL 361
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKW 472
V+ M + + +WG+LL + +G + + A+ LIE++P+N G I+L+NIY E +W
Sbjct: 362 VQDMPFKANAAIWGALLAAARTHGDAELGKQALLHLIELEPHNSGNYILLSNIYAEQERW 421
Query: 473 DEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
D+V K+RK +KDR PG S IEVD VH+F S D +HP +I L
Sbjct: 422 DDVSKLRKQMKDRGLRNVPGASSIEVDGMVHEFTSRDGSHPCLHKICKVL 471
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 44/298 (14%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K NL AR +FD + N +T +I AYA Q A ++R M +P+
Sbjct: 146 VKSGNLACARELFDVMPARNVVSWTTVIGAYA-QMKQPVEAVEVFRRMQVEEGIEPDGVA 204
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGF-EQYPVVETALVNSYSRSGNDIGIARKLFDE 175
VL +C D+ + VH +V+ G Q P++ A+++ Y + G + A ++F+
Sbjct: 205 LLSVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLM-NAIIDMYVKLGC-VRKAVEVFEG 262
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
M ++VV+WT +VIAG +GL +AI F
Sbjct: 263 MDQKSVVTWT-------------------------------TVIAGFALHGLGLEAIEMF 291
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK---VIHGYVYRNGLDLDSFISNALI 292
RRM ME N+ PN VT + LSA H G+ LG+ I YR ++ + ++
Sbjct: 292 RRMEME---NVAPNDVTFLAILSACSHVGLTDLGRWYFKIMVSQYRIKQRVEHY--GCMV 346
Query: 293 DMYGKCGSLKEARRAF-DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
D+ G+ G L EA+ D K W +++ + HG +E ++ + HN
Sbjct: 347 DLLGRAGYLMEAQDLVQDMPFKANAAIWGALLAAARTHGDAELGKQALLHLIELEPHN 404
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 281/525 (53%), Gaps = 49/525 (9%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTN--FYAFKLVRFCTLKLSNLTYA-- 65
+ L +++++ RC + L+ + LT L + F KL+ C +
Sbjct: 15 EALEAHIVSLVRRCPGLLALRSAHAHLTRLRLPRLTAAFALSKLLASCVSAPAPAAAQAA 74
Query: 66 -----RFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
R +FD + P + Y ++I A + A ++ A ++YR M+R G P+PN F
Sbjct: 75 ASSYARNLFDQIPDPTAFCYNSLIRALPA--AGSAPALAVYRRMLRAGSPRPNSFTLAFA 132
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
LK+C V + +H Q ++ G V+T L+N Y++ + +AR +FD M+
Sbjct: 133 LKACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKC-EQVALARTVFDGMAG-- 189
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
D+++ AW+++++G ++ G+ ++A+ FR M
Sbjct: 190 ----------------------------DKNLVAWSAMVSGYSRVGMVNEALGLFREMQ- 220
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ + P++VT+V +SA G L LGK +H Y+ R G+ +D +S ALIDMY KCG
Sbjct: 221 --AVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGL 278
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
++ AR FD +K +W++MI FA+HG E+++ +F M+ + +RP+ VTFI +
Sbjct: 279 IERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELK---VRPNNVTFIGV 335
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC H GLVE GR Y+ +M + I+P +E+YGC+VDLL R+G ++A V GM + P
Sbjct: 336 LSACAHSGLVEDGRRYWSIM-QNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSP 394
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
+ V+W +LL CK R D AE A K+L+E++P+N ++L+N+Y +WD V +R+
Sbjct: 395 NSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRR 454
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+K +N G S IE++ +H+F D +HP EI L M
Sbjct: 455 KMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLREM 499
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 173/521 (33%), Positives = 283/521 (54%), Gaps = 50/521 (9%)
Query: 14 QQVLAILERCNHIN-HLKQLQSFLTTLGQSQTN-----FYAFKLVRFCTLKLSNLTYARF 67
++ +A+L C +Q+ +F G TN + F L+ FC S ++YA
Sbjct: 40 KKCIALLLSCASSKFKFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFC----SPMSYAHQ 95
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
IF + PN + + MI YA + + A LYR M +P+ YP +LK+ +
Sbjct: 96 IFSQIQNPNIFTWNTMIRGYA-ESENPMPALELYRQM-HVSCIEPDTHTYPFLLKAIAKL 153
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
++ R + VH+ +++GFE V+ LV+ Y+ G+
Sbjct: 154 MDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHA---------------------- 191
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
++A LF+ M +R++ WNSVI G NG ++A++ FR MG+ +
Sbjct: 192 ----------ESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLR---GVE 238
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P+ T+V LSA G L LG+ H Y+ + GLD + NAL+D+Y KCGS+++A +
Sbjct: 239 PDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKV 298
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FD +K + SW S+I A++G + ++ +F+E+ R + P +TF+ +L AC+H
Sbjct: 299 FDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELER---KGLMPSEITFVGVLYACSHC 355
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
G+V++G YFK M + Y I P+IEHYGC+VDLLGRAG ++A E ++ M ++P+ VVW +
Sbjct: 356 GMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRT 415
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LL C I+G E A +L++++P + G ++L+N+Y +W +V KVR+ +
Sbjct: 416 LLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGV 475
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
KTPG S +E+ ++H+F D++HP+TEEIY L + L
Sbjct: 476 KKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKL 516
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 166/466 (35%), Positives = 262/466 (56%), Gaps = 41/466 (8%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD +T + + AMIT Y + A L+++M+R +P++ VL +C
Sbjct: 168 ARKVFDXITERDVVSWNAMITGYVENCGY-EEALELFKEMMRT-NVRPDEGTLVSVLSAC 225
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ +HT LV+ + G+ + I
Sbjct: 226 AQSGSIELGREIHT----------------LVDDHHGFGSSLKIV--------------- 254
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
A I Y++ GD++ A+ LF+ + +DV +WN++I G T L+ +A+ F+ M +
Sbjct: 255 NAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEM---LRS 311
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR--NGLDLDSFISNALIDMYGKCGSLK 302
PN VT++ L A H G + +G+ IH Y+ + G+ S + +LIDMY KCG ++
Sbjct: 312 GESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIE 371
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
A + F+ K L+SWN+MI FA+HG++ + +F M + + I PD +T + LL+
Sbjct: 372 AAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRK---NGIEPDDITLVGLLS 428
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H GL++ GR FK +T+ Y I P++EHYGC++DLLG AG F+EA E++ M +EPD
Sbjct: 429 ACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDG 488
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
V+W SLL CK++G + AE +KL+EI+P N G ++L+NIY G+W++V ++R++L
Sbjct: 489 VIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVL 548
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
+ K PGCS IE+D VH+F DK HP++ EIY LE M L
Sbjct: 549 NGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVL 594
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 231/484 (47%), Gaps = 51/484 (10%)
Query: 40 GQSQTNFYAFKLVRFCTLK--LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSA 97
G TN+ KL+ C + L YA +F+ PN ++ M+ AS + S
Sbjct: 9 GLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS-SDLVSP 67
Query: 98 FSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVN 157
+Y MV G PN + +P +LKSC + +H Q++K G E T+L++
Sbjct: 68 LEMYVRMVSXGHV-PNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLIS 126
Query: 158 SYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNS 217
Y+R+G + ARK+FD S R+VVS TA+I+GY GD+++A +FD + +RDV +WN+
Sbjct: 127 MYARNGR-LEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNA 185
Query: 218 VIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV- 276
+I G +N + +A+ F+ M + N+RP++ TLV LSA +G ++LG+ IH V
Sbjct: 186 MITGYVENCGYEEALELFKEM---MRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVD 242
Query: 277 YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSI 336
+G I NA I +Y KCG ++ A F+ S K + SWN++I + + ++
Sbjct: 243 DHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEAL 302
Query: 337 CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR-IEPQIEHYGC 395
+F+EM+R + P+ VT +S+L AC H G ++ GR + K + +
Sbjct: 303 LLFQEMLRSGE---SPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTS 359
Query: 396 LVDLLGRAGRFEEALEVVKGM----------------------------------KIEPD 421
L+D+ + G E A +V M IEPD
Sbjct: 360 LIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPD 419
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIE---IDPNNGGYGIMLANIYGELGKWDEVRKV 478
++ LL+ C G D K + + I P YG M+ ++ G G + E ++
Sbjct: 420 DITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMI-DLLGHAGLFKEAEEI 478
Query: 479 RKML 482
M+
Sbjct: 479 IHMM 482
>gi|326489701|dbj|BAK01831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 171/446 (38%), Positives = 252/446 (56%), Gaps = 10/446 (2%)
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC---PDVLESRGTKMV 136
+TA I A + ++A +L + P PN VL +C P +R +
Sbjct: 34 WTAAIARPAREGDLPATAAALSAMLSSPAAPAPNDVTLLTVLSACAGAPSSPLARPLALS 93
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGD 196
+ F + ++ T L Y S +A +LF M+ R++V++ MI+G R G
Sbjct: 94 LHALAAKLFPSHLLLCTCLARFYLAS-RLPHLALQLFGSMTVRSLVTYNTMITGLMRNGL 152
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
+ A +FD MP+ D +W ++I GC +NG +AI F M + D + P+ VTLV A
Sbjct: 153 VAAAREVFDGMPEPDKVSWTALIDGCVKNGRHDEAIDCFHAM---LLDGVEPDYVTLVAA 209
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
+SA G L LG +H V R L+ + I+N+LIDMY +CG ++ AR+ FD + +
Sbjct: 210 ISACAEVGALGLGMWVHRLVTRERLEGNIRIANSLIDMYARCGQVEFARQVFDSMRNRTV 269
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
SWNSMI FA +G+ ++I FE M R RPD VTF +L AC+H GL ++G Y
Sbjct: 270 VSWNSMIVGFAANGRCTDAIEHFEAMRR---KGFRPDAVTFTGVLTACSHAGLTDEGLRY 326
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
+K M + I ++EHYGC+VDLLGRAGR EA+ VV M + P+EVV G+LL GC+++G
Sbjct: 327 YKAMRAEHGITARMEHYGCVVDLLGRAGRLGEAMSVVATMPMRPNEVVLGALLAGCRMHG 386
Query: 437 RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWI 496
D AE ++ L+E DP ++L+NIY GKWD KVR ++K R K PG S +
Sbjct: 387 DVDMAEQLMQHLLEQDPGGDSNYVLLSNIYAATGKWDGAGKVRGLMKARGVKKRPGRSAV 446
Query: 497 EVDKQVHQFHSLDKTHPRTEEIYDAL 522
E+D VH+F D++HP+ +E++D L
Sbjct: 447 EIDGDVHEFVCGDRSHPQADEVFDML 472
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 11/210 (5%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
+ AR +FD + P+ +TA+I H A + M+ G +P+ +
Sbjct: 153 VAAAREVFDGMPEPDKVSWTALIDGCVKNGRH-DEAIDCFHAMLLDGV-EPDYVTLVAAI 210
Query: 122 KSCPDVLESRGTKM-VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
+C +V + G M VH + + E + +L++ Y+R G + AR++FD M +R
Sbjct: 211 SACAEV-GALGLGMWVHRLVTRERLEGNIRIANSLIDMYARCGQ-VEFARQVFDSMRNRT 268
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDR----DVPAWNSVIAGCTQNGLFSDAISFFR 236
VVSW +MI G+ G +A F++M + D + V+ C+ GL + + +++
Sbjct: 269 VVSWNSMIVGFAANGRCTDAIEHFEAMRRKGFRPDAVTFTGVLTACSHAGLTDEGLRYYK 328
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGML 266
M E R C + +G G L
Sbjct: 329 AMRAEHGITARMEHYG--CVVDLLGRAGRL 356
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 277/519 (53%), Gaps = 57/519 (10%)
Query: 50 KLVR-FCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRG 108
KL+R + +LK ++ AR +FD + N + MI +Y + + ++ M
Sbjct: 79 KLMRAYASLK--DVASARKVFDEIPERNVIIINVMIRSYVNNGFYGE-GVKVFGTMCG-C 134
Query: 109 QPQPNQFIYPHVLKSCPDVLESRGT----KMVHTQIVKSGFEQYPVVETALVNSYSRSGN 164
+P+ + +P VLK+C GT + +H K G V LV+ Y + G
Sbjct: 135 NVRPDHYTFPCVLKAC----SCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGF 190
Query: 165 DIGIARKLFDEMSDRNVVSWTAMISGY--------------------------------- 191
+ AR + DEMS R+VVSW +++ GY
Sbjct: 191 -LSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLP 249
Query: 192 ----TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
T ++ +F M + + +WN +I +N + +A+ + RM +D
Sbjct: 250 AVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRME---ADGFE 306
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P+ V++ L A G T L LGK IHGY+ R L + + NALIDMY KCG L++AR
Sbjct: 307 PDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDV 366
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F+ + + SW +MI+++ G+ +++ +F ++ QD + PD + F++ L AC+H
Sbjct: 367 FENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL---QDSGLVPDSIAFVTTLAACSHA 423
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GL+E+GR+ FKLMT Y+I P++EH C+VDLLGRAG+ +EA ++ M +EP+E VWG+
Sbjct: 424 GLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGA 483
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LL C+++ TD A KL ++ P GY ++L+NIY + G+W+EV +R ++K +
Sbjct: 484 LLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 543
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K PG S +EV++ +H F D++HP+++EIY L+ +V
Sbjct: 544 KKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLV 582
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 179/408 (43%), Gaps = 80/408 (19%)
Query: 99 SLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNS 158
SL + + + PQ F+ VL + PD+ R + VH++I+ + L+ +
Sbjct: 27 SLPKLELDQKSPQETVFLLGQVLDTYPDI---RTLRTVHSRIILEDLRCNSSLGVKLMRA 83
Query: 159 YSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSV 218
Y+ S D+ ARK+FDE+ +RNV+ MI Y
Sbjct: 84 YA-SLKDVASARKVFDEIPERNVIIINVMIRSY--------------------------- 115
Query: 219 IAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR 278
NG + + + F G N+RP+ T C L A +G + +G+ IHG +
Sbjct: 116 ----VNNGFYGEGVKVF---GTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK 168
Query: 279 NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICV 338
GL F+ N L+ MYGKCG L EAR D S++ + SWNS++ +A + + ++++ V
Sbjct: 169 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228
Query: 339 FEEMMRCQDHNIRPDGVTFISLLNAC---THGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
EM + I D T SLL A T ++ +FK+ K+ + +
Sbjct: 229 CREM---ESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKS------LVSWNV 279
Query: 396 LVDLLGRAGRFEEALEVVKGMK---IEPDEVVWGSLLNGC----------KIYGRTDFAE 442
++ + + EA+E+ M+ EPD V S+L C KI+G +
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER-- 337
Query: 443 FAVKKLIEIDPNNGGYGIMLAN----IYGELGKWDEVRKVRKMLKDRN 486
KKLI PN ++L N +Y + G ++ R V + +K R+
Sbjct: 338 ---KKLI---PN-----LLLENALIDMYAKCGCLEKARDVFENMKSRD 374
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 280/547 (51%), Gaps = 73/547 (13%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
+ +L+ C + L+Q+ + + G Q +F + + C LSN +Y +F+ +
Sbjct: 25 TSSISTLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCN-SLSNFSYTTSVFNGV 83
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
++P+T L+ I Y S+ S SL+ M +R P++F YP ++K+C V +
Sbjct: 84 SSPSTVLWNTYIKGY-SENYSVSLTVSLFIRM-KRSDAVPDKFTYPSLIKACSKVCGVKE 141
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI---- 188
H V+ G V T+L++ Y + G +I ARK+FDEM +RNVVSWTAMI
Sbjct: 142 GVAFHGSAVRCGVGGDVFVMTSLIDLYGKCG-EILCARKVFDEMGERNVVSWTAMIAGYA 200
Query: 189 ---------------------------SGYTRVGDIKNAASLFDSMP------------- 208
SGY + GD+++A +FD MP
Sbjct: 201 SFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDG 260
Query: 209 ------------------DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
+RDV AW+++I+G QNG ++A+ F M S N++P++
Sbjct: 261 YAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEM---CSRNVKPDE 317
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD-SFISNALIDMYGKCGSLKEARRAFD 309
+V +SA G L+L K + YV ++ +D+ + + ALIDM KCGS+ A + F+
Sbjct: 318 FIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFE 377
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
K+ L S+ SM+ ++HG ++ +F M+ + + PD V F +L AC+ GL
Sbjct: 378 EMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRML---NEGLTPDDVAFTVILTACSRAGL 434
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
V++G YF+ M Y I P +HY C+VDLLGRAGR +EA E++K M +EP WG+LL
Sbjct: 435 VDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALL 494
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
CK++ + E +L E++P N G ++L+NIY +W +V +R +++R K
Sbjct: 495 GACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRK 554
Query: 490 TPGCSWI 496
PGCSWI
Sbjct: 555 IPGCSWI 561
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 182/525 (34%), Positives = 269/525 (51%), Gaps = 82/525 (15%)
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
+ PN ++A+I +A Q + A L M G +PN VL +C +
Sbjct: 7 SKPNLVSWSAVIGGFA-QNGYDKEALELLCRMQAAGF-EPNARTLASVLPACARLQNLNL 64
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS--------- 183
K +H + + GF P V LV+ Y R D+G A K+F S +NVVS
Sbjct: 65 GKEIHGYVTRHGFMSNPFVVNGLVDVYRRCA-DMGSALKIFSGFSVKNVVSYNTMIVGYC 123
Query: 184 ------------------------WTAMISGYT----RVGDIKNAASLFDSMPDRDVPAW 215
W +MISGY + D+K A FD + +RD W
Sbjct: 124 ENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLKCEDLKAAQLAFDGVTERDTATW 183
Query: 216 NSVIAG---CTQ-----------------------NGLFSD---------AISFFRRMGM 240
N +I+G C Q NG+ S A+ F M
Sbjct: 184 NVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQ- 242
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ ++RP+ T+ L A + GK +H + R G +LD I AL+DMY KCGS
Sbjct: 243 --TSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGS 300
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+K A + ++R S L S N+M+ ++A+HG + I +F M+ + RPD VTF+S+
Sbjct: 301 IKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNML---GNGFRPDHVTFLSV 357
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L++C H G VE G +F LMT Y + P ++HY C+VDLL RAGR +EA E+VK + +P
Sbjct: 358 LSSCVHAGAVETGHEFFDLMT-YYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKP 416
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
D V+WG+LL GC I+G + E A + LIE++PNN G ++LAN+Y G+W ++ + R+
Sbjct: 417 DSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQ 476
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
M+KDR +K+PGCSWIE + +H F S DK+H +TE+IY L+++
Sbjct: 477 MIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKTEDIYTTLDNL 521
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 80/204 (39%), Gaps = 52/204 (25%)
Query: 25 HINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMI 84
H + ++Q +G + + YA K ++ +A +++ ++ PN AM+
Sbjct: 273 HAHSIRQGYELDVHIGAALVDMYA---------KCGSIKHAMQVYNRISNPNLVSQNAML 323
Query: 85 TAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG 144
TAYA H +L+R+M+ G +P+ + VL SC VH V++G
Sbjct: 324 TAYAMH-GHGDEGIALFRNMLGNGF-RPDHVTFLSVLSSC-----------VHAGAVETG 370
Query: 145 FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS----WTAMISGYTRVGDIKNA 200
E FD M+ NV +T ++ +R G + A
Sbjct: 371 HE-------------------------FFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEA 405
Query: 201 ASLFDSMPDR-DVPAWNSVIAGCT 223
L +P + D W +++ GC
Sbjct: 406 YELVKKIPRKPDSVMWGALLGGCV 429
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 298/578 (51%), Gaps = 83/578 (14%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
++++ H L+Q+ + L LG + F KL+ + ++T+AR +FD L P
Sbjct: 26 SLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIH-ASSSYGDITFARQVFDDLPRPQV 84
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+ + A+I Y S+ H A +Y M + + P+ F +PH+LK+C + + + VH
Sbjct: 85 FPWNAIIRGY-SRNNHFQDALLMYSKM-QLARVSPDSFTFPHLLKACGGLSHLQMGRFVH 142
Query: 138 TQIVKSGFEQ---------------------------YPVVE------TALVNSYSRSGN 164
Q+ + GFE P+ E TA+V++Y+++G
Sbjct: 143 AQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202
Query: 165 DIGIARKLFDEMSDRNV----VSWTAMISGYT---------------------------- 192
+ A ++F +M +V V+ ++++ +T
Sbjct: 203 PVE-ALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLI 261
Query: 193 -------RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
+ G + A LFD M ++ WN++I+G +NG DAI F M ++ +
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEM---INKD 318
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
+RP+ +++ A+SA G L+ + + YV R+ D FIS+ALIDM+ KCGS++ AR
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECAR 378
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
FDR + + W++MI + LHGQ+ +I ++ M R + P+ VTF+ LL AC
Sbjct: 379 SVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMER---DGVHPNDVTFLGLLIACN 435
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
H G+V +G +F M ++I PQ +HY C++DLLGRAG ++A EV+K M ++P VW
Sbjct: 436 HSGMVREGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVW 494
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
G+LL+ CK + + ++A ++L IDP+N G+ + L+N+Y WD V +VR +K++
Sbjct: 495 GALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEK 554
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K GCSW+EV ++ F DK+HPR EEI +E
Sbjct: 555 GLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVE 592
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 182/563 (32%), Positives = 298/563 (52%), Gaps = 55/563 (9%)
Query: 7 QLNQTLNQQVLA-ILERCNHINHLKQLQSFLTTLGQSQTN-FYAFKLVR---FCTLKLSN 61
Q N L + + IL++ I +LK+L S + +N KL+R C S
Sbjct: 31 QQNVVLTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWST 90
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
R IFD + N + MI +Y + + S A ++++M G P+ + YP VL
Sbjct: 91 ----RHIFDEIPKKNVVFFNVMIRSYVNNHLY-SDALLVFKNMAGHGI-DPDHYTYPCVL 144
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
K+ + +H +V+ G + V L++ Y + G + R L D+M R+V
Sbjct: 145 KASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVL-DQMPCRDV 203
Query: 182 VSWTAMISGYTRVGDIKNA-------------------ASL------------------F 204
VSW ++++G R G +A ASL F
Sbjct: 204 VSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMF 263
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
+ ++ + +WN +IA N + ++A+ F +M D P+ +++ L A G
Sbjct: 264 MKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVD---PDAISIASVLPACGDLS 320
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
L LG+ IH YV R L + + NALIDMY KCG L+ AR FD+ + + SW SMI+
Sbjct: 321 ALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMIS 380
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
++ ++G+ +++ +F M QD + PD + F+S+L+AC+H GL+++GR YFKLMT+
Sbjct: 381 AYGMNGKGRDAVSLFSRM---QDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEEC 437
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
+I P+IEH+ C+VDLLGRAG+ +EA +K M +EP+E VWG+LL+ C++Y A
Sbjct: 438 KIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLA 497
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
+L ++ P GY ++L+NIY + G+W++V VR ++K + K PG S E+D +VH
Sbjct: 498 ADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHT 557
Query: 505 FHSLDKTHPRTEEIYDALESMVA 527
F + D++HP++++IY+ L+ V
Sbjct: 558 FLAGDQSHPQSKQIYEELDVSVG 580
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 155/389 (39%), Positives = 236/389 (60%), Gaps = 8/389 (2%)
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD-RNVVSWTAMISGYTRV 194
VH VK+G V AL + Y G D+G R +FDE+ R+VV+W A+++GY R
Sbjct: 152 VHALAVKAGAAGDLYVRNALTHFYGVCG-DVGAMRTVFDELPRVRDVVTWNAVLAGYVRA 210
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G ++ A +F+ MP RD +W++++ G + G A+ FR M V +R N+ +V
Sbjct: 211 GMVRAAREVFEEMPVRDEVSWSTLVGGYVKEGELDVALGVFRDM---VEKGVRVNEAAVV 267
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
ALSA G+L+ G+ +H V R G+ + + AL+DM+ KCG + AR FD ++
Sbjct: 268 TALSAAAQMGLLEHGRFVHEVVQRTGMPVSVNVGAALVDMFSKCGCVAVAREVFDGMPRR 327
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ +WN+MI A HG ++++ +F R D + P +TF+ +LNAC+ GLV +GR
Sbjct: 328 DVFAWNAMICGLASHGLGQDAVELF---WRFLDEGLWPTDITFVGVLNACSRCGLVAEGR 384
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
YFKLM YRIEP++EHYGC+VDLLGRAG EA+E+++GM I PD V+WG++L+ CK
Sbjct: 385 RYFKLMVDKYRIEPEMEHYGCMVDLLGRAGLVSEAIELIEGMHIAPDPVLWGTVLSACKT 444
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+ D KLIE++P + G+ ++LA+IY + KWDEVR+VRK++ R K+ G S
Sbjct: 445 HNLVDLGITVGNKLIELEPAHDGHYVLLASIYAKAKKWDEVREVRKLMSSRGTGKSAGWS 504
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
+E +H+F D H + +IY+ L+
Sbjct: 505 LMEAQGNLHKFLVGDMDHKDSVQIYNMLD 533
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 84/209 (40%), Gaps = 31/209 (14%)
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR- 315
L A H LG +H + G D ++ NAL YG CG + R FD + R
Sbjct: 137 LDATDHRASSFLGSHVHALAVKAGAAGDLYVRNALTHFYGVCGDVGAMRTVFDELPRVRD 196
Query: 316 LTSWNSMINSFALHGQSENSICVFEEM-MRCQ---------------------------D 347
+ +WN+++ + G + VFEEM +R + +
Sbjct: 197 VVTWNAVLAGYVRAGMVRAAREVFEEMPVRDEVSWSTLVGGYVKEGELDVALGVFRDMVE 256
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE 407
+R + ++ L+A GL+E GR +++ +T + + LVD+ + G
Sbjct: 257 KGVRVNEAAVVTALSAAAQMGLLEHGRFVHEVVQRT-GMPVSVNVGAALVDMFSKCGCVA 315
Query: 408 EALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
A EV GM D W +++ G +G
Sbjct: 316 VAREVFDGMP-RRDVFAWNAMICGLASHG 343
>gi|225445484|ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 533
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 179/531 (33%), Positives = 294/531 (55%), Gaps = 22/531 (4%)
Query: 3 SVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK--LS 60
+V N + TLN ++L++C ++ LKQ+ + L ++ F +L+ S
Sbjct: 5 AVINYRSNTLN----SLLKKCRALSQLKQIHANLLQSHLPESPFAIGQLLSLAATSNNPS 60
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
++A IF +L+ N ++Y +MI Y + + A Y DM+ G N + +P +
Sbjct: 61 FFSHACLIFQNLSLRNIFMYNSMIRGYVLSHS-PTRAILCYLDMLNYGL-LANNYTFPPL 118
Query: 121 LKSCPDVLESRGTK--MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
+K+C + S +VH +V GF++ P V +AL+ YS + D+G AR LFD + +
Sbjct: 119 IKACTTLGSSSKLIGCLVHAHVVTFGFDEDPFVVSALIEFYSLN-FDMGTARTLFDRIPN 177
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
R+VV WTAMI GY ++GD+++A LF+ MP+R+ +W++V+A ++ G F + + FRRM
Sbjct: 178 RDVVLWTAMIDGYGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRM 237
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
PN+ LV L+A H G L G +H Y + D + ++ AL+DMY KC
Sbjct: 238 Q---EAGTMPNESVLVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKC 294
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G ++ A F K +WN+MI+ A++G + S+ +F +M+ + +P TF+
Sbjct: 295 GCVESALSTFQGIPNKDAGAWNAMISGVAMNGDAWKSLELFNKMI---SNGTQPTETTFV 351
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK---G 415
++L ACTH LV++G F+ M+ Y +EPQ+EHY CLVDL+ RAG EA + ++ G
Sbjct: 352 AVLTACTHARLVKEGLKLFEQMSSNYGVEPQLEHYACLVDLMARAGMLAEAEKFIEEKMG 411
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD-E 474
D VWG++L C+ YG + KKL ++ + G ++ N+Y E G WD E
Sbjct: 412 GLGRGDANVWGAMLGACRTYGNIEVGNRVWKKLADMGVADCGTHVLSYNLYREAG-WDME 470
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
++VR+++ + K PGCS IEVD V +F + D +H + +I L+S+
Sbjct: 471 AKRVRRLISEAGMKKKPGCSIIEVDGTVEEFLAGDLSHSQAPQICKTLDSL 521
>gi|224116552|ref|XP_002331925.1| predicted protein [Populus trichocarpa]
gi|222874597|gb|EEF11728.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 179/512 (34%), Positives = 289/512 (56%), Gaps = 12/512 (2%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQS-QTNFYAFKLV-RFCTLKLSNLTYARFIFDH 71
Q + +L+ C + LKQ+ + T G A KLV R+ KL N A+ +F +
Sbjct: 4 QSLKLLLQSCADLVTLKQIHAQALTQGLLFIEQPLACKLVNRYA--KLGNPRDAQKVFGY 61
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ P+ YT++I Y S AFS++ +V G +P+ L +C +
Sbjct: 62 IQDPDRVTYTSLINLYLSTQL-PIKAFSVFSKLVNEGL-RPDSHSVVGALSACGKKQDLL 119
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
K+VH I + +V AL++ Y R+G +I IA+ +F +M ++V SWT++++G+
Sbjct: 120 NGKLVHGMIFRFQLGANSIVGNALIDMYCRNG-EIKIAQLVFKQMGIKDVSSWTSLLNGF 178
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
+++A +FD MP R+ AW ++I G + G+ + FR+M E + +P +
Sbjct: 179 VMCNGLESARRVFDEMPWRNDVAWTAMITGYVRGGMPIRGLEMFRQMKAEGEN--QPTVI 236
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
T V LS G G+ +HGY+ + LD +SNAL+DMY K G ++ A + FDR
Sbjct: 237 TAVAVLSGCADLGAHDHGQAVHGYISKVNLDKGVTVSNALMDMYSKGGCVESAMKIFDRL 296
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
KK + SW +MI++ + HG+ +++ VF +M+ + + P+ VTF+ +L+ C+H GL+
Sbjct: 297 VKKDVFSWTTMISAHSSHGKGNHALEVFYDML---ESGVIPNDVTFLLVLSGCSHSGLLV 353
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ F M + Y EP+IEHYGC+VDLL RAG EEA E++ M ++PD V+W SLL+
Sbjct: 354 EANKLFNGMIQCYGFEPKIEHYGCMVDLLCRAGLLEEAKELIDNMPMDPDAVIWRSLLSA 413
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C AE A KK+IE++P++ G ++L+NIY + + RK+RKM+ D+ K P
Sbjct: 414 CMNQRNLGLAEIAGKKIIELEPHDDGVYVLLSNIYHVANRMKDARKMRKMMGDQKVMKKP 473
Query: 492 GCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
CS+IE++ VHQFH+ + TH + +IY LE
Sbjct: 474 ACSYIELNGVVHQFHTENATHHASTKIYMLLE 505
>gi|345505208|gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]
Length = 615
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 176/494 (35%), Positives = 272/494 (55%), Gaps = 25/494 (5%)
Query: 19 ILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L+ C+ + +K Q FL G F L+ LK L +AR +FD ++
Sbjct: 129 VLKACSRLGFVKEGMQXHGFLRKTGIWSDLFLQNCLIGL-YLKCGCLGFARQVFDRMSQR 187
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
++ Y +MI Y + SA L+ M P++ L S ++ +
Sbjct: 188 DSVSYNSMIDGYV-KCGLIESARELFDLM-------PSE---KKNLISWNSMINGYAQRA 236
Query: 136 VHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
I + F++ P + +L++ Y + G I A+ LFD+M R+VV+W M+ GY
Sbjct: 237 DGVDIASNLFDEMPEKDLISWNSLIDGYVKHGR-IEDAKDLFDKMPRRDVVTWATMVDGY 295
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
++G + A SLFD MP RDV A+NS++AG QN +AI F ME ++ P++
Sbjct: 296 AKLGFVHQAKSLFDQMPQRDVVAYNSMMAGYVQNRYHMEAIDIFN--DMEKESHLSPDET 353
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
TLV LSAI G L +H Y L + ALIDMY KCGS+++A F+R
Sbjct: 354 TLVIVLSAIAQLGRLSKAMDMHLYTVEKKFLLGGKLGVALIDMYSKCGSIQQAMGVFERI 413
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K + WN+MI A+HG E++ F+ +++ + +I+PD +TF+ +LNAC+H GLV+
Sbjct: 414 ENKSIDHWNAMIGGLAIHGLGESA---FDMLLQIERRSIKPDDITFVGVLNACSHSGLVK 470
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G F+LM + ++IEP+++HYGC+VD+L R+GR E A +++ M IEP++V+W + L
Sbjct: 471 EGLLCFELMKRKHKIEPRLQHYGCMVDILSRSGRIELAKNLIEEMPIEPNDVIWRTFLTA 530
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C + + E K LI N ++L+N+Y LG W EVR+VR M+K+R K P
Sbjct: 531 CSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASLGMWKEVRRVRTMMKERKIQKIP 590
Query: 492 GCSWIEVDKQVHQF 505
GCSWIE+D VH+F
Sbjct: 591 GCSWIELDGSVHEF 604
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 21/252 (8%)
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
WN+VI + A+ F M + + + ++ +L L A G ++ G HG
Sbjct: 91 WNAVIKSHSHGVEPRKALLLFFLM---LKNGVSVDKFSLSLVLKACSRLGFVKEGMQXHG 147
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
++ + G+ D F+ N LI +Y KCG L AR+ FDR S++ S+NSMI+ + G E+
Sbjct: 148 FLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMSQRDSVSYNSMIDGYVKCGLIES 207
Query: 335 SICVFEEMMRCQDHNIRPDGVTFISLLNA-CTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
+ +F ++M + N+ +++ S++N V+ F M E + +
Sbjct: 208 ARELF-DLMPSEKKNL----ISWNSMINGYAQRADGVDIASNLFDEMP-----EKDLISW 257
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDP 453
L+D + GR E+A ++ M D V W ++++G Y + F A K L + P
Sbjct: 258 NSLIDGYVKHGRIEDAKDLFDKMP-RRDVVTWATMVDG---YAKLGFVHQA-KSLFDQMP 312
Query: 454 NNG--GYGIMLA 463
Y M+A
Sbjct: 313 QRDVVAYNSMMA 324
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 153/462 (33%), Positives = 274/462 (59%), Gaps = 8/462 (1%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ +F+ L N +T +I+ + Q + + L+ M R +QF ++ C
Sbjct: 324 AKGVFNSLHDRNNVAWTVLISGFL-QYGCFTESVELFNQM-RAELMTLDQFALATLISGC 381
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
++ + +H+ +KSG Q VV +L++ Y++ N + A +F M+++++VSW
Sbjct: 382 CSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDN-LQSAEAIFRFMNEKDIVSW 440
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T+MI+ Y++VG++ A FD M +++V WN+++ Q+G D + ++ M E +
Sbjct: 441 TSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSE--E 498
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+RP+ VT V G +LG I G + GL +D+ ++NA+I MY KCG + EA
Sbjct: 499 YVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEA 558
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R+ FD + K + SWN+MI ++ HG + +I +F+++++ +PD ++++++L+ C
Sbjct: 559 RKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILK---RGAKPDYISYVAVLSGC 615
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLV++G+ YF +M + + I P +EH+ C+VDLLGRAG EA +++ M ++P V
Sbjct: 616 SHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEV 675
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL+ CKI+G + AE A K + E+D + G +++A IY + GK D+ ++RK+++D
Sbjct: 676 WGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRD 735
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+ K PG SW+EVD +VH F + D +HP+ I L+ ++
Sbjct: 736 KGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELM 777
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 180/406 (44%), Gaps = 15/406 (3%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
KL L+ A +F + + + +++ Y + S + M R G PN F
Sbjct: 83 KLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVS-LETFLSMHRSGDSWPNAFTL 141
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+KSC + + + K + V ALV+ + R G + +A +LF +
Sbjct: 142 ACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGA-VDLASRLFVRIK 200
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+ + +M++GY + + +A LFDSMP+RDV +WN +++ +Q+G +A+
Sbjct: 201 EPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 260
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M S +R + T +L+A L+ GK +H V RN +D ++++AL+++Y K
Sbjct: 261 MQ---SKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAK 317
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
G KEA+ F+ + +W +I+ F +G S+ +F +M + + D
Sbjct: 318 SGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQM---RAELMTLDQFAL 374
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+L++ C + GR L K+ +I+ + L+ + + + A + + M
Sbjct: 375 ATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQSAEAIFRFMN 433
Query: 418 IEPDEVVWGSLLNGCKIYG-----RTDFAEFAVKKLIEIDPNNGGY 458
E D V W S++ G R F + K +I + G Y
Sbjct: 434 -EKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAY 478
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 161/353 (45%), Gaps = 42/353 (11%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ L+SC G + +H ++V G ++ L+++Y G R L ++
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 66
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+ NV++ M++GY ++G + +A LF MP RDV +WN++++G Q+ + ++ F
Sbjct: 67 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF- 125
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+ M S + PN TL CA+ + G G L + V + DS ++ AL+DM+
Sbjct: 126 -LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFV 184
Query: 297 KCGSLKEARR-------------------------------AFDRNSKKRLTSWNSMINS 325
+CG++ A R FD ++ + SWN M+++
Sbjct: 185 RCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSA 244
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
+ G+ ++ + +M Q +R D T+ S L AC + G+ +L + R
Sbjct: 245 LSQSGRVREALDMVVDM---QSKGVRLDSTTYTSSLTACARLSSLRWGK---QLHAQVIR 298
Query: 386 IEPQIEHY--GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
P I+ Y LV+L ++G F+EA V + + + V W L++G YG
Sbjct: 299 NLPHIDPYVASALVELYAKSGCFKEAKGVFNSLH-DRNNVAWTVLISGFLQYG 350
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 151/374 (40%), Gaps = 81/374 (21%)
Query: 2 VSVTNQLN---QTLNQQVLAILER--CNHINHL--KQLQSFLTTLGQSQTNFYAFKLVRF 54
V + NQ+ TL+Q LA L C+ ++ +QL S GQ Q + L+
Sbjct: 356 VELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISM 415
Query: 55 CTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS------------------------- 89
K NL A IF + + +T+MITAY+
Sbjct: 416 YA-KCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAM 474
Query: 90 -----QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG 144
Q +Y+ M+ +P+ Y + K C D+ ++ + + VK G
Sbjct: 475 LGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVG 534
Query: 145 FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLF 204
V A++ YS+ G I ARK+FD ++ +++VSW AMI+GY++ G K A +F
Sbjct: 535 LIIDTSVANAVITMYSKCGR-ILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIF 593
Query: 205 DSMPDR----DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
D + R D ++ +V++GC+ +GL + +F M+ + NI P C
Sbjct: 594 DDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDM--MKRAHNISPGLEHFSC----- 646
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS-W 319
++D+ G+ G L EA+ D K W
Sbjct: 647 ------------------------------MVDLLGRAGHLTEAKDLIDDMPMKPTAEVW 676
Query: 320 NSMINSFALHGQSE 333
+++++ +HG +E
Sbjct: 677 GALLSACKIHGNNE 690
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 153/462 (33%), Positives = 274/462 (59%), Gaps = 8/462 (1%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ +F+ L N +T +I+ + Q + + L+ M R +QF ++ C
Sbjct: 344 AKGVFNSLHDRNNVAWTVLISGFL-QYGCFTESVELFNQM-RAELMTLDQFALATLISGC 401
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
++ + +H+ +KSG Q VV +L++ Y++ N + A +F M+++++VSW
Sbjct: 402 CSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDN-LQSAEAIFRFMNEKDIVSW 460
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T+MI+ Y++VG++ A FD M +++V WN+++ Q+G D + ++ M E +
Sbjct: 461 TSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSE--E 518
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+RP+ VT V G +LG I G + GL +D+ ++NA+I MY KCG + EA
Sbjct: 519 YVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEA 578
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R+ FD + K + SWN+MI ++ HG + +I +F+++++ +PD ++++++L+ C
Sbjct: 579 RKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILK---RGAKPDYISYVAVLSGC 635
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLV++G+ YF +M + + I P +EH+ C+VDLLGRAG EA +++ M ++P V
Sbjct: 636 SHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEV 695
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL+ CKI+G + AE A K + E+D + G +++A IY + GK D+ ++RK+++D
Sbjct: 696 WGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRD 755
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+ K PG SW+EVD +VH F + D +HP+ I L+ ++
Sbjct: 756 KGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELM 797
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 180/406 (44%), Gaps = 15/406 (3%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
KL L+ A +F + + + +++ Y + S + M R G PN F
Sbjct: 103 KLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVS-LETFLSMHRSGDSWPNAFTL 161
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+KSC + + + K + V ALV+ + R G + +A +LF +
Sbjct: 162 ACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGA-VDLASRLFVRIK 220
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+ + +M++GY + + +A LFDSMP+RDV +WN +++ +Q+G +A+
Sbjct: 221 EPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 280
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M S +R + T +L+A L+ GK +H V RN +D ++++AL+++Y K
Sbjct: 281 MQ---SKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAK 337
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
G KEA+ F+ + +W +I+ F +G S+ +F +M + + D
Sbjct: 338 SGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQM---RAELMTLDQFAL 394
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+L++ C + GR L K+ +I+ + L+ + + + A + + M
Sbjct: 395 ATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQSAEAIFRFMN 453
Query: 418 IEPDEVVWGSLLNGCKIYG-----RTDFAEFAVKKLIEIDPNNGGY 458
E D V W S++ G R F + K +I + G Y
Sbjct: 454 -EKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAY 498
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 161/353 (45%), Gaps = 42/353 (11%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ L+SC G + +H ++V G ++ L+++Y G R L ++
Sbjct: 27 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 86
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+ NV++ M++GY ++G + +A LF MP RDV +WN++++G Q+ + ++ F
Sbjct: 87 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF- 145
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+ M S + PN TL CA+ + G G L + V + DS ++ AL+DM+
Sbjct: 146 -LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFV 204
Query: 297 KCGSLKEARR-------------------------------AFDRNSKKRLTSWNSMINS 325
+CG++ A R FD ++ + SWN M+++
Sbjct: 205 RCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSA 264
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
+ G+ ++ + +M Q +R D T+ S L AC + G+ +L + R
Sbjct: 265 LSQSGRVREALDMVVDM---QSKGVRLDSTTYTSSLTACARLSSLRWGK---QLHAQVIR 318
Query: 386 IEPQIEHY--GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
P I+ Y LV+L ++G F+EA V + + + V W L++G YG
Sbjct: 319 NLPHIDPYVASALVELYAKSGCFKEAKGVFNSLH-DRNNVAWTVLISGFLQYG 370
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 151/374 (40%), Gaps = 81/374 (21%)
Query: 2 VSVTNQLN---QTLNQQVLAILER--CNHINHL--KQLQSFLTTLGQSQTNFYAFKLVRF 54
V + NQ+ TL+Q LA L C+ ++ +QL S GQ Q + L+
Sbjct: 376 VELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISM 435
Query: 55 CTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS------------------------- 89
K NL A IF + + +T+MITAY+
Sbjct: 436 YA-KCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAM 494
Query: 90 -----QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG 144
Q +Y+ M+ +P+ Y + K C D+ ++ + + VK G
Sbjct: 495 LGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVG 554
Query: 145 FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLF 204
V A++ YS+ G I ARK+FD ++ +++VSW AMI+GY++ G K A +F
Sbjct: 555 LIIDTSVANAVITMYSKCGR-ILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIF 613
Query: 205 DSMPDR----DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
D + R D ++ +V++GC+ +GL + +F M+ + NI P C
Sbjct: 614 DDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDM--MKRAHNISPGLEHFSC----- 666
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS-W 319
++D+ G+ G L EA+ D K W
Sbjct: 667 ------------------------------MVDLLGRAGHLTEAKDLIDDMPMKPTAEVW 696
Query: 320 NSMINSFALHGQSE 333
+++++ +HG +E
Sbjct: 697 GALLSACKIHGNNE 710
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/469 (36%), Positives = 270/469 (57%), Gaps = 14/469 (2%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K+ +L AR FD + + + AM +AYA Q A +L+ M+ G P+ +
Sbjct: 204 KMGDLESARRYFDEMPERSVVSWNAMQSAYA-QKECPKEALNLFHQMLEEG-ITPDDTTW 261
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM- 176
+ SC + + + I + V+TAL++ +++ GN + IAR +FDE+
Sbjct: 262 VVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGN-LEIARNIFDELG 320
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
S RN V+W MIS YTRVG + A LFD+MP RDV +WNS+IAG QNG + +I F+
Sbjct: 321 SQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFK 380
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M + D I+P++VT+ LSA GH G L+L + V + L N+LI MY
Sbjct: 381 EM-ISCMD-IQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYS 438
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCGS+ +A R F + + S+N++I+ FA +G + +I + M ++ I PD VT
Sbjct: 439 KCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTM---EEEGIEPDHVT 495
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+I +L AC+H GL+ +G+ FK + P ++HY C+VDLLGRAG +EA +++ M
Sbjct: 496 YIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSM 550
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
++P V+GSLLN +I+ R E A KL E++P N G ++L+NIY G+W++V+
Sbjct: 551 PMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVK 610
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+VR+M+K K+ G SW+E QVH+F D++H ++++IY L +
Sbjct: 611 RVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAEL 659
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/518 (25%), Positives = 244/518 (47%), Gaps = 87/518 (16%)
Query: 15 QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
+++A+ + ++I L+Q L N++ L+ CT ++ Y IF +
Sbjct: 3 ELVALASKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPS 62
Query: 75 PNTYLYTAMITAYASQPAH--ASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
P+ +Y+ M+ Y+ AH S F + R QP F+Y +++K L +
Sbjct: 63 PDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQP----FVYIYLIK-----LAGKS 113
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR------------- 179
+ H ++K G + A+++ Y+++G + +AR LF++M++R
Sbjct: 114 GNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQ-VDLARNLFEQMAERTLADWNSMISGCW 172
Query: 180 ------------------NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAG 221
N+++WT+M++GY ++GD+++A FD MP+R V +WN++ +
Sbjct: 173 KSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSA 232
Query: 222 CTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL 281
Q +A++ F +M + + I P+ T V +S+ G L I + + +
Sbjct: 233 YAQKECPKEALNLFHQM---LEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHI 289
Query: 282 DLDSFISNALIDMYGKCGSLKEARRAFD-----RNS------------------------ 312
L+SF+ AL+DM+ K G+L+ AR FD RN+
Sbjct: 290 VLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFD 349
Query: 313 ---KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
K+ + SWNSMI +A +G+S SI +F+EM+ C D I+PD VT S+L+AC H G
Sbjct: 350 NMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMD--IQPDEVTIASVLSACGHIGA 407
Query: 370 VEQGRAYFKL-MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
++ +Y+ L + + I+ I + L+ + + G +A + + M D V + +L
Sbjct: 408 LKL--SYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTR-DVVSFNTL 464
Query: 429 LNGCKIYGRTDFAEFAVKKLIE--IDPNNGGY-GIMLA 463
++G G A V + E I+P++ Y G++ A
Sbjct: 465 ISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTA 502
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 178/545 (32%), Positives = 273/545 (50%), Gaps = 49/545 (8%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYL 79
L+ C + L + G ++ F A L+ ++L AR +FD + N
Sbjct: 27 LKSCPAQPLARALHAAAVVSGLAEDPFVASSLLH-SYIRLGATGAARSVFDRMPEKNVVG 85
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPN-------------------------- 113
++A+I Y+++ A +A+ L M R +PN
Sbjct: 86 WSALIAGYSAR-GDAEAAWGLLEQM-RSAGVEPNVITWNGLVSGLNRSGRALDAVTALVR 143
Query: 114 ---QFIYPHV------LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN 164
+ +P L + DV E K VH +VK+G V TAL++ Y + G
Sbjct: 144 MHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGR 203
Query: 165 DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR----DVPAWNSVIA 220
I R +F E S +V S A+++G +R + A LF R +V +W S++A
Sbjct: 204 ADEIVR-VFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVA 262
Query: 221 GCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG 280
C QNG +A+ FR M S + PN VT+ C L A + L G+ H + R G
Sbjct: 263 CCVQNGRDLEAVDLFRTMQ---SIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKG 319
Query: 281 LDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFE 340
D ++ +AL+DMY KCG + AR FD + + SWN+MI +A+HG + N++ +F
Sbjct: 320 FLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFC 379
Query: 341 EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL 400
M +C+ +PD VTF +L AC+ GL E+GR YF M + + I P++EHY C+V LL
Sbjct: 380 SMQKCKQ---KPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLL 436
Query: 401 GRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI 460
GR+G+ +EA +++ M EPD +WGSLL C++YG AE A +KL +++P N G +
Sbjct: 437 GRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYV 496
Query: 461 MLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYD 520
+L+NIY WD V +VR +K+ K GCSWIE+ +VH + D +HP I +
Sbjct: 497 LLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITE 556
Query: 521 ALESM 525
L +
Sbjct: 557 KLNQL 561
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 186/380 (48%), Gaps = 28/380 (7%)
Query: 95 SSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETA 154
S + SLY +R P+ + P LKSCP +R +H V SG + P V ++
Sbjct: 2 SHSNSLYH-FLRHVSFPPDPHLLPSALKSCPAQPLARA---LHAAAVVSGLAEDPFVASS 57
Query: 155 LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM----PDR 210
L++SY R G G AR +FD M ++NVV W+A+I+GY+ GD + A L + M +
Sbjct: 58 LLHSYIRLGA-TGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEP 116
Query: 211 DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK 270
+V WN +++G ++G DA++ RM S+ P+ + CALSA+G + +GK
Sbjct: 117 NVITWNGLVSGLNRSGRALDAVTALVRMH---SEGFFPDATGVSCALSAVGDVKEVSVGK 173
Query: 271 VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG 330
+HGYV + G LD+ + ALIDMYGKCG E R F +S + S N+++ + +
Sbjct: 174 QVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNA 233
Query: 331 QSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQI 390
Q ++ +F E + C+ + + V++ S++ C G + F+ M ++ +EP
Sbjct: 234 QVSEALLLFREFI-CR--GVELNVVSWTSIVACCVQNGRDLEAVDLFRTM-QSIGVEPNS 289
Query: 391 EHYGCLVDLLGRA-----GRFEEALEVVKGMKIEPDEVVWGSLLN-----GCKIYGRTDF 440
C++ GR + KG D V +L++ G + RT F
Sbjct: 290 VTIPCVLPAFANVAALMHGRSAHCFSLRKGFL--HDVYVGSALVDMYAKCGKARHARTIF 347
Query: 441 AEFAVKKLIEIDPNNGGYGI 460
+ ++ + GGY +
Sbjct: 348 DAMPSRNVVSWNAMIGGYAM 367
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 181/547 (33%), Positives = 289/547 (52%), Gaps = 51/547 (9%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS--NLTYARFIF-----DHL 72
L C +N LKQL +T G Q KLV S +L YAR F D
Sbjct: 32 LRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVR 91
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
+ ++ ++I Y+S A LY M+ G PN + +P VL C +
Sbjct: 92 SDDALFMLNSLIRGYSS-AGLGREAILLYVRMLVLG-VTPNHYTFPFVLSGCTKIAAFCE 149
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
VH +VK G E+ ++ L++ Y+ G+ + K+F+ MS+RNVVSWT++I GY
Sbjct: 150 GIQVHGSVVKMGLEEDVFIQNCLIHFYAECGH-MDHGHKVFEGMSERNVVSWTSLICGYA 208
Query: 193 R-----------------------------VGDIKNAASLFDSMPDRDVPAWNSVIAGCT 223
R G I A LFD DR++ +N++++
Sbjct: 209 RGDRPKEAVSLFFEMLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYA 268
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG-----YVYR 278
+ GL +A++ M + RP++VT++ A+SA L GKV HG Y+ +
Sbjct: 269 RQGLAREALAILDEM---LQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEK 325
Query: 279 NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICV 338
NG+ D ++ AL+DM+ +CG + A + F++ +++ +++W + I + A+ G E + +
Sbjct: 326 NGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGL 385
Query: 339 FEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVD 398
F +M+ ++PD V F+ +L AC+HGG VEQG F LM + + I PQIEHYGC+VD
Sbjct: 386 FNQMLI---QGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVD 441
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGY 458
LLGRAG EA +++K M +EP++VVWGSLL C+++ + A +A +++ E+ P G
Sbjct: 442 LLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGV 501
Query: 459 GIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
++L+NIY GKW +V +VR L+++ K PG S ++V+ +H+F S D++HP I
Sbjct: 502 HVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHI 561
Query: 519 YDALESM 525
L+ M
Sbjct: 562 ALMLQEM 568
>gi|224059226|ref|XP_002299777.1| predicted protein [Populus trichocarpa]
gi|222847035|gb|EEE84582.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 164/423 (38%), Positives = 255/423 (60%), Gaps = 12/423 (2%)
Query: 105 VRRGQPQPNQFIYPHVLKSCPDVLESRGTKM---VHTQIVKSGFEQYPV-VETALVNSYS 160
+R + PN + +L C D L S+G + +H K G + + V TALV+ Y+
Sbjct: 1 MRLLEIDPNHVTFITLLSGCAD-LPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYA 59
Query: 161 RSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIA 220
+ G+ + ++R FDE+ +N SW MI G+ R G I+ A +FD MP+R V +W +I
Sbjct: 60 KCGH-VELSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLIN 118
Query: 221 GCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG 280
G + GLF +A+ +FR+M +VS + P++VT+V LSA + G L LG +H Y + G
Sbjct: 119 GFVKMGLFEEALEWFRKM--QVS-KVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKG 175
Query: 281 LDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFE 340
L + I N+LID+Y +CG+++ AR+ F++ ++ L SWNS+I A +G +E ++ F+
Sbjct: 176 LRDNVKICNSLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFD 235
Query: 341 EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL 400
M Q +P+ V+F L AC+H GLV++G YF +M + ++I P+IEHYGC+VDL
Sbjct: 236 LM---QKQGFKPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLY 292
Query: 401 GRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI 460
RAGR E+A+ VV+ M ++P+EVV GSLL C+ G + AE + L+ +DP +
Sbjct: 293 SRAGRLEDAMSVVQNMPMKPNEVVVGSLLAACRTRGDVELAERLMNYLVHLDPGADSNYV 352
Query: 461 MLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYD 520
+L+NIY +G+WD K R +K K PG S IE+ +H+F + DK+H + E+IY
Sbjct: 353 LLSNIYAAVGRWDGACKQRMTMKALGIQKKPGFSSIEIGCDIHEFVAGDKSHDKAEDIYS 412
Query: 521 ALE 523
LE
Sbjct: 413 MLE 415
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 173/469 (36%), Positives = 270/469 (57%), Gaps = 14/469 (2%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K+ +L AR FD + + + AM +AYA Q A +L+ M+ G P+ +
Sbjct: 204 KMGDLESARRYFDEMPERSVVSWNAMQSAYA-QKECPKEALNLFHQMLEEG-ITPDDTTW 261
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM- 176
+ SC + + + I + V+TAL++ +++ GN + IAR +FDE+
Sbjct: 262 VVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGN-LEIARNIFDELG 320
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
S RN V+W MIS YTRVG + A LFD+MP RDV +WNS+IAG QNG + +I F+
Sbjct: 321 SQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFK 380
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M + D I+P++VT+ LSA GH G L+L + V + L N+LI MY
Sbjct: 381 EM-ISCMD-IQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYS 438
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCGS+ +A R F + + S+N++I+ FA +G + +I + M ++ I PD VT
Sbjct: 439 KCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTM---EEEGIEPDHVT 495
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+I +L AC+H GL+ +G+ FK + P ++HY C+VDLLGRAG +EA +++ M
Sbjct: 496 YIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSM 550
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
++P V+GSLLN +I+ R E A KL E++P N G ++L+NIY G+W++V+
Sbjct: 551 PMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVK 610
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+VR+M+K K+ G SW+E QVH+F D++H ++++IY L +
Sbjct: 611 RVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAEL 659
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 134/518 (25%), Positives = 244/518 (47%), Gaps = 87/518 (16%)
Query: 15 QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
+++A+ + ++I L+Q L N++ L+ CT ++ Y IF +
Sbjct: 3 ELVALASKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPS 62
Query: 75 PNTYLYTAMITAYASQPAH--ASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
P+ +Y+ M+ Y+ AH S F + R QP F+Y +++K L +
Sbjct: 63 PDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQP----FVYIYLIK-----LAGKS 113
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR------------- 179
M H ++K G + A+++ Y+++G + +AR LF++M++R
Sbjct: 114 GNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQ-VDLARNLFEQMAERTLADWNSMISGCW 172
Query: 180 ------------------NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAG 221
N+++WT+M++GY ++GD+++A FD MP+R V +WN++ +
Sbjct: 173 KSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSA 232
Query: 222 CTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL 281
Q +A++ F +M + + I P+ T V +S+ G L I + + +
Sbjct: 233 YAQKECPKEALNLFHQM---LEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHI 289
Query: 282 DLDSFISNALIDMYGKCGSLKEARRAFD-----RNS------------------------ 312
L+SF+ AL+DM+ K G+L+ AR FD RN+
Sbjct: 290 VLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFD 349
Query: 313 ---KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
K+ + SWNSMI +A +G+S SI +F+EM+ C D I+PD VT S+L+AC H G
Sbjct: 350 NMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMD--IQPDEVTIASVLSACGHIGA 407
Query: 370 VEQGRAYFKL-MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
++ +Y+ L + + I+ I + L+ + + G +A + + M D V + +L
Sbjct: 408 LKL--SYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTR-DVVSFNTL 464
Query: 429 LNGCKIYGRTDFAEFAVKKLIE--IDPNNGGY-GIMLA 463
++G G A V + E I+P++ Y G++ A
Sbjct: 465 ISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTA 502
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 157/458 (34%), Positives = 267/458 (58%), Gaps = 13/458 (2%)
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
N + MI A Q S A +L+R+M R+G + F + +L C ++
Sbjct: 173 NVVSWNTMIGGCA-QAGETSEACALFREMRRQGV-LADVFTFVSLLLVCSKEGNLEVGRL 230
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
VH ++ SG ++ ALV+ Y + G D+ +A + FD M +NVVSWT+M+ + G
Sbjct: 231 VHCHMLASGSRVDLILGNALVDMYGKCG-DLWMAHRCFDVMPIKNVVSWTSMLCALAKHG 289
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
+ A F+ MP+R++ +WN++I+ Q G F + + + RM S + P++VTL
Sbjct: 290 SVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRMK---SLGLTPDEVTLAG 346
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
LS G G L G++IH Y+ + D + N+LIDMY +CG + + F K
Sbjct: 347 VLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKN 406
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
SWN +I + A+HG+++ ++ F M+ PD +TF+ LL+AC+HGGL+E G+
Sbjct: 407 TISWNVIIGALAMHGRAQEAVMFFRAMV---SDAFSPDEITFVGLLSACSHGGLLEDGQY 463
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
YFK M Y ++P++EHY C+VDLLGR G +A++++K M ++PD VVWG+L+ C+I+
Sbjct: 464 YFKAMRHIYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDMPMKPDVVVWGALIGACRIH 523
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
G + + A+K+L+E++ NGG ++++N+ E +W++++++RK+++DR K G S
Sbjct: 524 GHVEIGKLAIKQLLELEGINGGLFVLISNLLYETRQWEDMKRLRKLMRDRGTKKDMGVSS 583
Query: 496 IEVDKQVHQFHSLDKTHPRTEEIYDALES----MVALH 529
IE++ +H+F D H + +IY A++ +V+LH
Sbjct: 584 IEINNSIHEFGVEDIRHESSSQIYAAVDQLAYHLVSLH 621
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 209/469 (44%), Gaps = 73/469 (15%)
Query: 15 QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLV-RFCTLKLSN----LTYARFIF 69
VL +L++C I HL QL + L G S +LV +C L L +AR +F
Sbjct: 5 HVLELLQQCRSIRHLDQLHAHLLAHGPSAVASVVPQLVASYCALSGRAGDVALCHARRMF 64
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
D + P+ + Y ++I AY S A L+RD++RRG PN+F P VLK+C
Sbjct: 65 DRVPDPDRFAYNSLIRAY-SNSGCPQEALCLHRDVLRRG-ILPNEFTLPFVLKACSRARA 122
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS-DRNVVSWTAMI 188
+ H +K G+ + V AL++S + +G+ + +R+LF EM+ RNVVSW MI
Sbjct: 123 AEHALATHGVAIKLGYVRQVFVGNALLHSSASAGS-LRDSRRLFAEMAPHRNVVSWNTMI 181
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
G + G+ A +LF M + G+ +D +F
Sbjct: 182 GGCAQAGETSEACALFREM---------------RRQGVLADVFTFV------------- 213
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
+ LVC+ G L++G+++H ++ +G +D + NAL+DMYGKCG L A R F
Sbjct: 214 -SLLLVCS-----KEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCF 267
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM------------------------- 343
D K + SW SM+ + A HG + + FE+M
Sbjct: 268 DVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLG 327
Query: 344 ---RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL 400
R + + PD VT +L+ G + GR + ++ +P + L+D+
Sbjct: 328 LYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFS-DPGVTVLNSLIDMY 386
Query: 401 GRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
R G+ + ++ + M + + W ++ ++GR A + ++
Sbjct: 387 ARCGQVDTSISLFTEMP-NKNTISWNVIIGALAMHGRAQEAVMFFRAMV 434
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 256/445 (57%), Gaps = 14/445 (3%)
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQ-PQPNQFIYPHVLKSCPDVLESRGTKM-- 135
L+ A+I A S+ A A LY ++R G P P+ P +LKS G +
Sbjct: 39 LHDALIRAL-SRSARPHLALPLYAHLLRAGLLPTPHTL--PSLLKSMALSPAVPGAAVLA 95
Query: 136 --VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
VHT VK G +++ +V AL+ ++ + L + + ++ +I+ Y R
Sbjct: 96 LTVHTHAVKLGLDRFVLVSNALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYAR 155
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
G + +A +LFD MP R+ +W++++ G Q G +A+ F RM E ++RP+ L
Sbjct: 156 AGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAE---DVRPDDTVL 212
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
V L+A G L+ GK +HGY+ +G+ ++ F AL+DMY KCG ++ A F+R
Sbjct: 213 VGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQY 272
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K + +W +MI A+HG+ ++ +F +M + IRPD + FI +L ACTH GLV++G
Sbjct: 273 KNVLAWTTMIKGLAMHGRGSEAVMLFAQM---ESSGIRPDDIAFIGVLCACTHAGLVDKG 329
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
R F M + Y I+P+IEHYGC+VDLL R G EA E+++ M +EPD ++WG+L+ GC+
Sbjct: 330 RELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCR 389
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
+ +FAE+ K I ++P+ G ++L+NIY G+ R++R +++++ KTPGC
Sbjct: 390 FHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLMREKGVDKTPGC 449
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEI 518
S +EV+ +HQF D +HPR ++I
Sbjct: 450 STVEVNGVIHQFIVGDLSHPRIKDI 474
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 102/241 (42%), Gaps = 16/241 (6%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+ L AR +FD + N ++AM+ Y Q A ++ M + +P+ +
Sbjct: 155 RAGRLADARALFDEMPARNAVSWSAMVNGYV-QAGDGREALRIFARM-QAEDVRPDDTVL 212
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
VL +C K VH + G + TALV+ YS+ G ++ +A +F+ M
Sbjct: 213 VGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCG-EVQLAMDVFERMQ 271
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSM------PDRDVPAWNSVIAGCTQNGLFSDA 231
+NV++WT MI G G A LF M PD D+ A+ V+ CT GL
Sbjct: 272 YKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPD-DI-AFIGVLCACTHAGLVDKG 329
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
F M + I+P C + + G L K + + + ++ D+ I AL
Sbjct: 330 RELFDSMVRKY--GIKPKIEHYGCMVDLLARNGFLYEAKEM---IQKMPMEPDALIWGAL 384
Query: 292 I 292
+
Sbjct: 385 M 385
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 178/523 (34%), Positives = 278/523 (53%), Gaps = 48/523 (9%)
Query: 4 VTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK--LSN 61
+ QL+ Q L L +HL Q + L G + F +L+ L S+
Sbjct: 5 IIEQLHHPSLSQALTALTA---TSHLHQAHAHLIVSGLASHPFTVTRLLACAALSPSASD 61
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L +A+ IF H P+ +++ +I A + + + Y M+ G P+ F +P ++
Sbjct: 62 LPHAKTIFLHTHNPSPFMFNTIIMA----SSRTLDSVTFYVCMLHAGH-FPDNFTFPFLI 116
Query: 122 KSCPDVLESRGTKMVHTQIVKSGF----------------------------EQYPVVE- 152
KS S +H +VK G E Y +V+
Sbjct: 117 KSSSASPTSLLGHQLHAHVVKFGLDRDVFVVNNMIALYSSFRELRSARKVFDESYSLVDV 176
Query: 153 ---TALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
T L+ +S SG I ARK+FD M +N VSW AMISGY I A LFD MPD
Sbjct: 177 VSWTTLITGFSNSGQ-IDEARKIFDLMPLKNTVSWNAMISGYAGSSRINEARKLFDEMPD 235
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
RD +W+++++G +Q G+ ++A+ F M M D + PN+ LV A+SA L+ G
Sbjct: 236 RDAASWSAMVSGYSQLGMCNEALDLF--MEMVTGDKMIPNEAALVSAVSACAQLRALEEG 293
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
+ +H Y+ L ++ + L+DMYGKCGS+ +A F+ S++ + SWNSMI AL+
Sbjct: 294 RWLHSYIKEKKLRINVTLGTVLLDMYGKCGSILDAAGVFNLMSERNVNSWNSMIAGLALN 353
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
G + ++ +F +M Q P+ +TFI+LL C+H GL+ +GR F +MT+ Y I+PQ
Sbjct: 354 GCGKEALALFWKM---QFVGPSPNAITFIALLTGCSHSGLITEGRWLFSMMTQVYGIKPQ 410
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
++HYGC+VDLLGRAG +EAL+ V+ M ++P +WG+L+ C+I+G+ + E K+LI
Sbjct: 411 LKHYGCMVDLLGRAGLVKEALDFVEKMPMKPHSELWGALVGACRIHGQVELGEELGKRLI 470
Query: 450 EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+++P++GG +L NI+ +WD+V VR + K R K PG
Sbjct: 471 DLEPHHGGRYALLCNIFAAAQRWDDVAMVRDLEKGRKVLKNPG 513
>gi|449469438|ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 528
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 178/524 (33%), Positives = 284/524 (54%), Gaps = 19/524 (3%)
Query: 8 LNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL----KLSNLT 63
++QT N + +L +C + HLKQ+ + L SQ+ + L+ + S +
Sbjct: 2 IHQTFNNAISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFS 61
Query: 64 YARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
YA IF +L N ++Y +MI Y A Y D++ RG N++ +P ++K+
Sbjct: 62 YACGIFKNLQQRNIFMYNSMIRGY-FLSRFPKQAILCYLDLMDRG-FLANKYTFPPLIKA 119
Query: 124 CPDVLES--RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
C V R +VH ++ G+E V +ALV YS D+ +AR LFD+ S ++V
Sbjct: 120 CALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLF--DLKVARVLFDKSSGKDV 177
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
V WT M+ GY +VGDI++A LFD MP+R+V +W++++A ++ F + + FR+M
Sbjct: 178 VVWTVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQ-- 235
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
NI PN + L+A H G + G +H Y R GLD + ++ AL+DMY KCG +
Sbjct: 236 -KKNIVPNDSVIASVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYI 294
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+ A F+ S K +WN+MI+ FA+ G S+ +F++M+ + TF+S+L
Sbjct: 295 ESALEVFEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIA---SGTQATEATFVSIL 351
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK---GMKI 418
ACTH +VE+G +F M YR++PQ EHY C+VDL+ RAG E+A + V+ G
Sbjct: 352 AACTHAKMVERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFS 411
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
D VWG++L+ C+ Y + + KL + +GG ++ NI+ E G+ ++V
Sbjct: 412 NVDANVWGAILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEV 471
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
RK + + K PGCS I VD V +F + D +HP+ + I + L
Sbjct: 472 RKKFSEARSKKIPGCSVIVVDGAVQEFLAGDLSHPQVQHICEML 515
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 177/511 (34%), Positives = 270/511 (52%), Gaps = 52/511 (10%)
Query: 18 AILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
+L+ C + L KQ+ + +G F LV + K + R +FD +
Sbjct: 119 CVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYS-KCGEIELCRKVFDRMED 177
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
+ + ++I YA + A ++ +M P+ + F +
Sbjct: 178 KDVVSWNSLIDGYA-RCGEIELALEMFEEM-----PEKDSFSW----------------- 214
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
T L++ S+SG + AR +FD M RN VSW AMI+GY +
Sbjct: 215 ------------------TILIDGLSKSGK-LEAARDVFDRMPIRNSVSWNAMINGYMKA 255
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
GD A LFD MP+R + WNS+I G +N F+ A+ F M + ++I PN T++
Sbjct: 256 GDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVM---LREDISPNYTTIL 312
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
A+SA L G+ +H Y+ ++G D + LI+MY KCGS+K A R F KK
Sbjct: 313 GAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKK 372
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+L W S+I +HG E ++ +F+EM R ++P +TFI +LNAC+H G E
Sbjct: 373 KLGHWTSVIVGLGMHGLVEQTLELFDEMCRT---GLKPHAITFIGVLNACSHAGFAEDAH 429
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
YFK+MT Y I+P IEHYGCL+D+L RAG EEA + ++ M I+ ++V+W SLL+G +
Sbjct: 430 RYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRK 489
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+G E+A + LI++ P+ G ++L+N+Y G W++VR+VR+M+K + K PGCS
Sbjct: 490 HGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCS 549
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
IE +H+F DK+HP+TEEIY L M
Sbjct: 550 SIEHQGSIHEFIVGDKSHPQTEEIYIKLCEM 580
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 195/424 (45%), Gaps = 64/424 (15%)
Query: 20 LERCNHINHLKQLQSF-LTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTY 78
L+ C QL + + T + + + L + +++NL YA +FD + P
Sbjct: 22 LQNCGTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLV 81
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHT 138
+ +I Y + ++ A +L+ ++ P+ F P VLK C + + K +H
Sbjct: 82 SWNLLIKCYI-ENQRSNDAIALFCKLL--CDFVPDSFTLPCVLKGCARLGALQEGKQIHG 138
Query: 139 QIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIK 198
++K GF V ++LV+ YS+ G +I + RK+FD M D++VVSW ++I GY R G+I+
Sbjct: 139 LVLKIGFGVDKFVLSSLVSMYSKCG-EIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIE 197
Query: 199 NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
A +F+ MP++D +W +I G +++G A F RM +
Sbjct: 198 LALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPI------------------ 239
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
RN + NA+I+ Y K G A+ FD+ ++ L +
Sbjct: 240 -------------------RNSVSW-----NAMINGYMKAGDSNTAKELFDQMPERSLVT 275
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
WNSMI + + Q ++ +FE M+R +I P+ T + ++A + G+V G +
Sbjct: 276 WNSMITGYERNKQFTKALKLFEVMLR---EDISPNYTTILGAVSAAS--GMVSLGTGRW- 329
Query: 379 LMTKTYRIEPQIEHYGC----LVDLLGRAGRFEEALEVVKGMKIEPDEVV--WGSLLNGC 432
+Y ++ + G L+++ + G + AL V + + P + + W S++ G
Sbjct: 330 --VHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSI---PKKKLGHWTSVIVGL 384
Query: 433 KIYG 436
++G
Sbjct: 385 GMHG 388
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 178/550 (32%), Positives = 294/550 (53%), Gaps = 54/550 (9%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTN-FYAFKLVR---FCTLKLSNLTYARFIFDHLTT 74
IL++ I +LK+L S + +N KL+R C S R IFD +
Sbjct: 1033 ILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWS----TRHIFDEIPK 1088
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
N + MI +Y + + S A ++++M G P+ + YP VLK+ +
Sbjct: 1089 KNVVFFNVMIRSYVNNHLY-SDALLVFKNMAGHGI-DPDHYTYPCVLKASSGSEDLWVGM 1146
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H +V+ G + V L++ Y + G + R + DZM R+VVSW ++++G R
Sbjct: 1147 QIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACR-VLDZMPCRDVVSWNSLVAGCARN 1205
Query: 195 GDIKNA-------------------ASL------------------FDSMPDRDVPAWNS 217
G +A ASL F + ++ + +WN
Sbjct: 1206 GQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNV 1265
Query: 218 VIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVY 277
+IA N + ++A+ F +M D P+ +++ L A G L LG+ IH YV
Sbjct: 1266 MIAVYMNNSMPAEAVDIFLQMEDHAVD---PDAISIASVLPACGDLSALLLGRRIHEYVV 1322
Query: 278 RNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSIC 337
R L + + NALIDMY KCG L+ AR FD+ + + SW SMI+++ ++G+ +++
Sbjct: 1323 RKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVS 1382
Query: 338 VFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLV 397
+F M QD + PD + F+S+L+AC+H GL+++GR YFKLMT+ +I P+IEH+ C+V
Sbjct: 1383 LFSRM---QDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMV 1439
Query: 398 DLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGG 457
DLLGRAG+ +EA +K M +EP+E VWG+LL+ C++Y A +L ++ P G
Sbjct: 1440 DLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSG 1499
Query: 458 YGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEE 517
Y ++L+NIY + G+W++V VR ++K + K PG S E+D +VH F + D++HP++++
Sbjct: 1500 YYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQ 1559
Query: 518 IYDALESMVA 527
IY+ L+ +V
Sbjct: 1560 IYEELDVLVG 1569
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 171/368 (46%), Gaps = 41/368 (11%)
Query: 140 IVKSGFEQYPVVETA-LVNSYSRSGNDIGIARKLFDEMS-DRNVVSWTAM----ISGYTR 193
I K F Q VV T L DI +KL ++ D ++ S ++ + Y
Sbjct: 1013 IQKPKFTQQXVVLTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAV 1072
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
G+ + +FD +P ++V +N +I N L+SDA+ F+ M I P+ T
Sbjct: 1073 CGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMA---GHGIDPDHYTY 1129
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
C L A + L +G IH V R GLDL+ F+ N LI MYGKCG L EA R D
Sbjct: 1130 PCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPC 1189
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ + SWNS++ A +GQ ++++ V +EM + ++PD T SLL A T+ L
Sbjct: 1190 RDVVSWNSLVAGCARNGQFDDALEVCKEM---ELLGLKPDAGTMASLLPAVTNTCLDNVS 1246
Query: 374 ---RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK---IEPDEVVWGS 427
+ KL K+ + + ++ + EA+++ M+ ++PD + S
Sbjct: 1247 FVKEMFMKLANKS------LVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIAS 1300
Query: 428 LLNGCK-----IYGRTDFAEFAVKKLIEIDPNNGGYGIMLAN----IYGELGKWDEVRKV 478
+L C + GR E+ V+K ++ PN ++L N +Y + G + R+V
Sbjct: 1301 VLPACGDLSALLLGRR-IHEYVVRKRLQ--PN-----LLLENALIDMYAKCGCLEYAREV 1352
Query: 479 RKMLKDRN 486
+K R+
Sbjct: 1353 FDQMKFRD 1360
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 158/451 (35%), Positives = 253/451 (56%), Gaps = 40/451 (8%)
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
P+ + ++T + +Q +A ++ M G PN L +C V + K
Sbjct: 462 PDIITWNGLVTGF-TQYGDGKAALEFFQRMHSMGM-DPNTTTISGALAACGQVRNLKLGK 519
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H ++++ E V +AL++ YS G D
Sbjct: 520 EIHGYVLRNHIELSTGVGSALISMYS--GCD----------------------------- 548
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
++ A S+F + RDV WNS+I+ C Q+G +A+ R M + N+ N VT+V
Sbjct: 549 -SLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNL---SNVEVNTVTMV 604
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
AL A L+ GK IH ++ R GLD +FI N+LIDMYG+CGS++++RR FD ++
Sbjct: 605 SALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQR 664
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
L SWN MI+ + +HG +++ +F++ + ++P+ +TF +LL+AC+H GL+E+G
Sbjct: 665 DLVSWNVMISVYGMHGFGMDAVNLFQQF---RTMGLKPNHITFTNLLSACSHSGLIEEGW 721
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
YFK+M Y ++P +E Y C+VDLL RAG+F E LE ++ M EP+ VWGSLL C+I
Sbjct: 722 KYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRI 781
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+ D AE+A + L E++P + G +++ANIY G+W++ K+R ++K+R K PGCS
Sbjct: 782 HCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCS 841
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
WIEV +++H F D +HP E+I +ES+
Sbjct: 842 WIEVKRKLHSFVVGDTSHPLMEQISAKMESL 872
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 225/500 (45%), Gaps = 91/500 (18%)
Query: 18 AILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDHLT 73
+IL++C + +L+ Q+ + L G F +L+ +C + + AR +FD ++
Sbjct: 94 SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYC--QTGCVEDARRMFDKMS 151
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
N + +TA++ Y + + L+ MV G +P+ F++P V K+C ++ R
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEET-IKLFYLMVNEG-VRPDHFVFPKVFKACSELKNYRVG 209
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
K V+ ++ GFE V+ ++++ + + G + IAR+ F+E+ ++V W M+SGYT
Sbjct: 210 KDVYDYMLSIGFEGNSCVKGSILDMFIKCGR-MDIARRFFEEIEFKDVFMWNIMVSGYTS 268
Query: 194 VGDIKNAASLFDSM------PDR----------------------------------DVP 213
G+ K A M PD+ +V
Sbjct: 269 KGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVV 328
Query: 214 AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH 273
+W ++IAG QNG +A+S FR+M +E ++PN +T+ A+SA + +L+ G+ IH
Sbjct: 329 SWTALIAGSEQNGYDFEALSVFRKMVLE---GVKPNSITIASAVSACTNLSLLRHGREIH 385
Query: 274 GYVYR-NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQS 332
GY + LD D + N+L+D Y KC S++ ARR F + L SWN+M+ +AL G
Sbjct: 386 GYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSH 445
Query: 333 ENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM------------ 380
E +I + EM + I PD +T+ L+ T G + +F+ M
Sbjct: 446 EEAIELLSEM---KFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTI 502
Query: 381 ---------TKTYRIEPQIEHY-------------GCLVDLLGRAGRFEEALEVVKGMKI 418
+ ++ +I Y L+ + E A V +
Sbjct: 503 SGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELST 562
Query: 419 EPDEVVWGSLLNGCKIYGRT 438
D VVW S+++ C GR+
Sbjct: 563 R-DVVVWNSIISACAQSGRS 581
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 219/459 (47%), Gaps = 35/459 (7%)
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
PN +TA+I A + Q + A S++R MV G +PN + +C ++ R +
Sbjct: 325 PNVVSWTALI-AGSEQNGYDFEALSVFRKMVLEG-VKPNSITIASAVSACTNLSLLRHGR 382
Query: 135 MVHTQIVK-SGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+H +K + +V +LV+ Y++ + +AR+ F + ++VSW AM++GY
Sbjct: 383 EIHGYCIKVEELDSDLLVGNSLVDYYAKC-RSVEVARRKFGMIKQTDLVSWNAMLAGYAL 441
Query: 194 VGDIKNAASLFDSMP----DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
G + A L M + D+ WN ++ G TQ G A+ FF+RM S + PN
Sbjct: 442 RGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMH---SMGMDPN 498
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
T+ AL+A G L+LGK IHGYV RN ++L + + +ALI MY C SL+ A F
Sbjct: 499 TTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFS 558
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
S + + WNS+I++ A G+S N++ + EM N+ + VT +S L AC+
Sbjct: 559 ELSTRDVVVWNSIISACAQSGRSVNALDLLREM---NLSNVEVNTVTMVSALPACSKLAA 615
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
+ QG+ + + + ++ L+D+ GR G +++ + M + D V W ++
Sbjct: 616 LRQGKEIHQFIIRC-GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMI 673
Query: 430 NGCKIYGRTDFAEFAVK-----KLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
+ +YG F AV + + + PN+ + +L+ G +E K KM+K
Sbjct: 674 S---VYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSAC-SHSGLIEEGWKYFKMMKT 729
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
A +D V Q+ + R + + LE
Sbjct: 730 EYA----------MDPAVEQYACMVDLLSRAGQFNETLE 758
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 103/220 (46%), Gaps = 41/220 (18%)
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L+LG +H + NG+D+ F+ + L+++Y + G +++ARR FD+ S++ + SW +++
Sbjct: 105 LRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEM 164
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
+ G E +I +F M+ + +RPD F + AC+ G+ + M +
Sbjct: 165 YCGLGDYEETIKLFYLMV---NEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYML-SIG 220
Query: 386 IEPQIEHYGCLVDLLGRAGR-------------------------------FEEALEVVK 414
E G ++D+ + GR F++AL+ +
Sbjct: 221 FEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCIS 280
Query: 415 GMK---IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
MK ++PD+V W ++++G Y ++ E A K +E+
Sbjct: 281 DMKLSGVKPDQVTWNAIISG---YAQSGQFEEASKYFLEM 317
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 153/397 (38%), Positives = 244/397 (61%), Gaps = 9/397 (2%)
Query: 133 TKMVHTQIVKSGFEQYPVVETALVN---SYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
K + + F++ P+ + L N + S +++ ARK+FD M R++VSW MI
Sbjct: 3 AKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIH 62
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GY G++ A +FD DRD +W+S+I+ ++ +A+ +R M + +I P+
Sbjct: 63 GYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMH---AASIIPD 119
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+TLV +SA G L +G +H +V N ++LD + ALIDMY KCG ++ A+R FD
Sbjct: 120 CITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFD 179
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
R +K + +W+SMI A HG S+ +F +M+ ++P+GVTF+ +L ACTH GL
Sbjct: 180 RMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMI---SEGMKPNGVTFVGVLIACTHVGL 236
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
V +G+ YF+ M + + IEP +EHYGC+VDLLGR+G EEA ++++ M EPD ++W +LL
Sbjct: 237 VSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALL 296
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
C+I+ + AE A+ KL +DP G+ ++L+NIY + W+ V ++RK ++ N +
Sbjct: 297 GACRIHKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQR 356
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
PG S IE D+++H+F S D+ HPR++EIY LE M+
Sbjct: 357 IPGRSSIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMM 393
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 180/516 (34%), Positives = 278/516 (53%), Gaps = 16/516 (3%)
Query: 18 AILERC---NHINHLKQLQSFLTTL--GQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
A++ RC N I+ ++L S + +L SQ F A L+ K L YAR +F+ +
Sbjct: 65 ALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYG-KCGRLPYARELFESM 123
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR- 131
+ N + +T + A++ H S A +R M + G+ +P++ + +L + + +
Sbjct: 124 PSRNVHTWTVAMAAFSHNGCH-SEALVFFRRMYQSGE-RPDRVTFSVILAAIAQMGAAAI 181
Query: 132 -GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
+ +H SG VV TA+++ Y + G + AR F+E+ +N V+W AM++
Sbjct: 182 DQGREIHRYARISGLLPNVVVGTAVISMYGKCGR-LDDARAAFEELQWKNSVTWNAMMTN 240
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y G + A LF M D D WN++IA Q+G A+ +R M + ++ P Q
Sbjct: 241 YKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYR--SMHDTTDLAPKQ 298
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
T V + L+ G+ IH V D + +SNAL+ MYGKCG L EA F
Sbjct: 299 GTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHS 358
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
K SWN++I+S+A HG S+ ++ +++EM ++P VTF+ LL+AC+HGGLV
Sbjct: 359 MKLKDEISWNTIISSYAYHGHSDQALLLYQEM---DLQGVKPTEVTFVGLLSACSHGGLV 415
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
G YF M +RI+P + H+GC++DLLGR GR EA V+K M I+ + V W SLL
Sbjct: 416 ADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLG 475
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
CK +G A ++++ P G ++L+NIY G+W +V K+RK++ R K+
Sbjct: 476 ACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKS 535
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
PG SWIE+ VH+F S D +HP+ EEIY L MV
Sbjct: 536 PGKSWIEIGDVVHEFVSGDSSHPQGEEIYVELGKMV 571
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 165/464 (35%), Positives = 264/464 (56%), Gaps = 9/464 (1%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
R +FD + P L+T +I AY A L+R M G P+ V+ +C
Sbjct: 145 GRQVFDEMRQPGLVLWTLIIRAYVCV-TFPEKALELFRTMREVGL-TPDMVAISTVVSAC 202
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ + K +H I KSG E V + L+++Y G+ + A + F E +N+V W
Sbjct: 203 GLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGS-LDYAYRFFQETPMKNIVVW 261
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
MI +++ LF SMPDRDV +WNS+I G + G + +A+++F M E S
Sbjct: 262 NTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEM--EFS- 318
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ PN +TL+ LSA G L G IH YV +N ++ D + ++LIDMY KCG + +A
Sbjct: 319 GVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKA 378
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ F+ ++++ L +W S++ A+HG+ E ++ F +M Q ++PD VT + +L+AC
Sbjct: 379 VQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQ---VQPDDVTMVGVLSAC 435
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
H GL++QG YF+ M K + + P++EHYGC+VDLLGR G +EA +++ GM +E +E++
Sbjct: 436 AHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVDLLGRMGCLKEAYDLIMGMPMEANEII 495
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+ L+ C+++ + E A ++L+ +DP + +ML+N+Y E KWD +RK +K
Sbjct: 496 WGAFLSACRVHNNVELGEVAARRLLGLDPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKK 555
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
+ K+PGCS IEV+ VH F D +HP EI +E + L
Sbjct: 556 KGLKKSPGCSSIEVNGSVHGFLVGDNSHPCYTEINSMVEKIEKL 599
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 173/417 (41%), Gaps = 73/417 (17%)
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
L N +++ MI LY R +PN + ++LK+ E +
Sbjct: 49 LDCANVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVK 108
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
+ VH +V++GF V AL+ Y G +G R++FDEM +V WT +I Y
Sbjct: 109 EGEEVHASVVRTGFACSEFVSGALLGFYVACGL-VGKGRQVFDEMRQPGLVLWTLIIRAY 167
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
V + A LF +M R +G+ P+ V
Sbjct: 168 VCVTFPEKALELFRTM----------------------------REVGLT------PDMV 193
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
+ +SA G G L + K +H ++ ++G+++D+F+S+ LI YG+CGSL A R F
Sbjct: 194 AISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQET 253
Query: 312 SKKRL-------------------------------TSWNSMINSFALHGQSENSICVFE 340
K + SWNSMI FA GQ + ++ F
Sbjct: 254 PMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFH 313
Query: 341 EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL 400
EM + + P+ +T +S L+AC G ++ G A+ + L+D+
Sbjct: 314 EM---EFSGVSPNALTLLSTLSACASHGALDTG-AWIHAYVDKNDMNRDGSLDSSLIDMY 369
Query: 401 GRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA--EFAVKKLIEIDPNN 455
+ G ++A+++ + D W S++ G ++GR + A F+ K ++ P++
Sbjct: 370 SKCGDIDKAVQIFEE-STRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDD 425
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 11/233 (4%)
Query: 199 NAASLFDSMPDRDVPAWNSVIAGCTQNGLFS-DAISFFRRMGMEVSDNIRPNQVTLVCAL 257
+AAS D +V WN++I +NGL + D + G+ +RPN T + L
Sbjct: 44 SAASRLDCA---NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRA--GLRPNGHTFMYLL 98
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
A+ ++ G+ +H V R G F+S AL+ Y CG + + R+ FD + L
Sbjct: 99 KALVSGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLV 158
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
W +I ++ E ++ +F M ++ + PD V ++++AC G + +A
Sbjct: 159 LWTLIIRAYVCVTFPEKALELFRTM---REVGLTPDMVAISTVVSACGLLGDLGVAKAMH 215
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
+ K+ IE L+ G G + A + ++ + VVW ++++
Sbjct: 216 CFIEKS-GIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIH 266
>gi|357150678|ref|XP_003575540.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 491
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 161/417 (38%), Positives = 242/417 (58%), Gaps = 12/417 (2%)
Query: 113 NQFIYPHVLKSCPDVLESRG-TKMVHTQIVKSGFEQYP---VVETALVNSYSRSGNDIGI 168
N + P L +C +L + + +HT +VKSG + T+L Y+R G +
Sbjct: 64 NPALMP-ALAACGRLLTAAAEAEQIHTLLVKSGLPRSVSGVYASTSLARVYARHGR-LAD 121
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
ARK+FD M + VVSW ++ G+ R GD+ A LF M +R+V +WN+V+ G + G
Sbjct: 122 ARKVFDGMPETTVVSWNVLLDGFVRAGDLDAAWELFVEMTERNVVSWNTVMVGFARLGRA 181
Query: 229 SDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS 288
+A+ F + M + P++ T+V +SA+ + G+L LG+ HGYV R LD +
Sbjct: 182 QEAVELF--VEMTTVYGLVPDEATMVGFVSAVRNIGLLGLGRSAHGYVIRREFSLDGALG 239
Query: 289 NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDH 348
LI+MY +CGS+ A F + K + W S I FA HG + ++ +F EM ++
Sbjct: 240 VGLINMYTRCGSMTAAYLCFSSVTSKNVEHWTSAIGGFAAHGHPDMALRLFAEM---REL 296
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
I P+ VTF+++LNAC+HGGLV++G YF +M K I P I+HYGCLVDLLGRAG EE
Sbjct: 297 GIEPNDVTFVAVLNACSHGGLVDEGFKYFNMMRKM-GIRPSIQHYGCLVDLLGRAGFLEE 355
Query: 409 ALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGE 468
A + + +P V W SLL C+ +G D AE A +KL + +PN+G ++L+N Y
Sbjct: 356 AFNLASSLPKDPGFVTWSSLLAACQTHGNVDMAEVAAQKLADAEPNHGSSYVLLSNAYAR 415
Query: 469 LGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
G+W+++++ R ++ A K PG SWIEVD VH F + DK+H + IY LE++
Sbjct: 416 AGQWEDLKRTRSRMEAHRAVKKPGLSWIEVDGSVHSFGTADKSHTENKGIYQMLENL 472
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 188/587 (32%), Positives = 308/587 (52%), Gaps = 80/587 (13%)
Query: 8 LNQTLNQQVLAILERCNHINHLKQLQSF-LTTLGQSQTNFYAFKLVRFCTL--------- 57
L + ++ L++L++ +L Q+ +F L ++ N + K + C+
Sbjct: 147 LWSPIERKCLSLLQQSKTRANLLQIHAFMLRNALETNPNLFT-KFIATCSSIALLAPLYD 205
Query: 58 KLSNLTYARFIFDHLT-TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
L+ + +AR +FDH + +L +MI AY ++ S F+LYRD+ R P+ F
Sbjct: 206 PLAGIVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSES-FALYRDLRRNTSFTPDSFT 264
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGF------------------------------- 145
+ + KSC + + +H+ +V GF
Sbjct: 265 FSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMI 324
Query: 146 EQYPVVETALVNSYSRSGN------------------------------DIGIARKLFDE 175
++ V TAL+ Y RSG+ D+ ARKLFDE
Sbjct: 325 DRSQVSWTALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDMCSARKLFDE 384
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
M +R+VVSWT MI GY+ G++ +A SLFD+MP++++ +WN++I+G QN +A+ F
Sbjct: 385 MPERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQPYEALKLF 444
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
M + + ++ P++VT+V L AI G L LG +H +V R LD + + ALIDMY
Sbjct: 445 HEM--QSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMY 502
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCG + ++R FD +K SWN++IN+FA++G+++ ++ +F EM P+ +
Sbjct: 503 AKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEALGLFMEM---NHKGFMPNEI 559
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
T I +L+AC H GLVE+G+ +FK M + + + P+IEHYGC+VDLLGRAG +EA ++++
Sbjct: 560 TMIGVLSACNHSGLVEEGKRWFKAMEE-FGLTPKIEHYGCMVDLLGRAGCLQEAEKLMES 618
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M E + ++ S L C AE +K+ I+++ N G IML N+Y +W E
Sbjct: 619 MPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRWKEA 678
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+V+ +++ K GCS IEVD +V +F + D+ HP+ E I+ L
Sbjct: 679 DEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPKWEAIHSVL 725
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 158/412 (38%), Gaps = 76/412 (18%)
Query: 102 RDMVRRGQP---QPNQFIYPHVLKSCPDVLESRGTK----MVHTQIVKSGFEQYPVVETA 154
RD R QP Q ++ + + C +L+ T+ +H ++++ E P + T
Sbjct: 130 RDGELRSQPMRGNQQQSLWSPIERKCLSLLQQSKTRANLLQIHAFMLRNALETNPNLFTK 189
Query: 155 LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVP- 213
+ + S I + L+D ++ I +A +FD P RD
Sbjct: 190 FIATCS----SIALLAPLYDPLAG------------------IVHARRMFDHRPHRDDAF 227
Query: 214 AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH 273
NS+I +S++ + +R + S P+ T + + G+ IH
Sbjct: 228 LCNSMIKAYVGMRQYSESFALYRDLRRNTS--FTPDSFTFSVLAKSCALNMAIWEGQEIH 285
Query: 274 GYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSE 333
+V G LD + + AL+DMY K G + AR+ FD + SW ++I + G +
Sbjct: 286 SHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMD 345
Query: 334 NSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
N+ +F++M I D F ++++A G + R F M + + I Y
Sbjct: 346 NAGKLFDQM-------IEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIY 398
Query: 394 G-----------CLVDLLGRAGRFE---------------EALEVVKGMK----IEPDEV 423
G L D + F EAL++ M+ +EPDEV
Sbjct: 399 GYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQPYEALKLFHEMQSTTSLEPDEV 458
Query: 424 VWGSLLNGCKIYGRTDFA----EFAVKKLIEIDPNNGGYGIMLANIYGELGK 471
S+L G D F +K ++ N G L ++Y + G+
Sbjct: 459 TIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATN---VGTALIDMYAKCGE 507
>gi|413924390|gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]
Length = 496
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 174/443 (39%), Positives = 250/443 (56%), Gaps = 12/443 (2%)
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV----LESRGTKM 135
+T+ I+ A Q ++A SL + P PN VL +C D L S
Sbjct: 35 WTSTISRAARQGDLHAAAASLCAMVSSPAAPAPNDVTLLTVLSACADSPSSPLASPLALT 94
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+H + +K F + ++ T L Y S +A +LFD M R+VV++ MISG R G
Sbjct: 95 LHARALKL-FPSHLLLSTCLARFYLAS-RLPHLALQLFDSMPVRSVVTYNTMISGLMRNG 152
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
+ A +FD MP D +W ++I G +NG +AI FR M + D + + +TLV
Sbjct: 153 LVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAM---LLDGVETDYITLVA 209
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
+SA G L LG +H V R L+ + ++N+LIDMY +CG + A + F K+
Sbjct: 210 VVSACAEVGALGLGMWVHRLVLRQRLERNVRVANSLIDMYARCGQVNLAAQVFRSIRKRT 269
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
+ SWNSMI FA +G+ ++I +FEEM R +PD VT +L AC+H GL E G
Sbjct: 270 VVSWNSMIVGFAANGRCTDAIELFEEMRR---QGFKPDAVTLTGVLTACSHAGLTEHGLR 326
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
Y+ LMT Y + ++EHYGC+VDLLGRAGR +EA+ VV+ M + P+EVV G+LL GC+ +
Sbjct: 327 YYDLMTTEYGVAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALLAGCRTH 386
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
G D AE ++ L E+DP ++L+NIY +GKWD KVR ++K R K PG S
Sbjct: 387 GNLDMAEQMMQHLFELDPQGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGVKKRPGHST 446
Query: 496 IEVDKQVHQFHSLDKTHPRTEEI 518
+E+D VH+F S D++HP EI
Sbjct: 447 VEIDGDVHEFVSGDQSHPLAGEI 469
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/448 (37%), Positives = 252/448 (56%), Gaps = 13/448 (2%)
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC---PDVLESRGTKMV 136
+T I Y + H A S + M R +PN + +L +C P +
Sbjct: 59 WTTSIADYC-KSGHLVKAASKFVQM-REAAIEPNHITFITLLSACAHYPSRSSISFGTAI 116
Query: 137 HTQIVKSGFEQYPV-VETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
H + K G + V V TAL++ Y++ G + AR FD+M RN+VSW MI GY R G
Sbjct: 117 HAHVRKLGLDINDVMVGTALIDMYAKCGR-VESARLAFDQMGVRNLVSWNTMIDGYMRNG 175
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
++A +FD +P ++ +W ++I G + +A+ FR M + + P+ VT++
Sbjct: 176 KFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLS---GVAPDYVTVIA 232
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
++A + G L LG +H V + +SN+LIDMY +CG + AR+ FDR ++
Sbjct: 233 VIAACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRT 292
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
L SWNS+I FA++G ++ ++ F M Q+ +PDGV++ L AC+H GL+ +G
Sbjct: 293 LVSWNSIIVGFAVNGLADEALSYFNSM---QEEGFKPDGVSYTGALMACSHAGLIGEGLR 349
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
F+ M + RI P+IEHYGCLVDL RAGR EEAL V+K M ++P+EV+ GSLL C+
Sbjct: 350 IFEHMKRVRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRTQ 409
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
G AE + LIE+D ++L+NIY +GKWD KVR+ +K+R K PG S
Sbjct: 410 GNIGLAENVMNYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPGFSS 469
Query: 496 IEVDKQVHQFHSLDKTHPRTEEIYDALE 523
IE+D +H+F S DK+H + IY ALE
Sbjct: 470 IEIDSSIHKFVSGDKSHEEKDHIYAALE 497
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 153/354 (43%), Gaps = 81/354 (22%)
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
+VSWT I+ Y + G + AAS F M +
Sbjct: 56 IVSWTTSIADYCKSGHLVKAASKFVQMREA------------------------------ 85
Query: 241 EVSDNIRPNQVTLVCALSAIGH---TGMLQLGKVIHGYVYRNGLDL-DSFISNALIDMYG 296
I PN +T + LSA H + G IH +V + GLD+ D + ALIDMY
Sbjct: 86 ----AIEPNHITFITLLSACAHYPSRSSISFGTAIHAHVRKLGLDINDVMVGTALIDMYA 141
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF----------------- 339
KCG ++ AR AFD+ + L SWN+MI+ + +G+ E+++ VF
Sbjct: 142 KCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNGKFEDALQVFDGLPVKNAISWTALIGG 201
Query: 340 -------EEMMRC----QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL-MTKTYRIE 387
EE + C Q + PD VT I+++ AC + G + G +L MT+ +R
Sbjct: 202 FVKKDYHEEALECFREMQLSGVAPDYVTVIAVIAACANLGTLGLGLWVHRLVMTQDFRNN 261
Query: 388 PQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKK 447
++ + L+D+ R G + A +V M + V W S++ G + G D A
Sbjct: 262 VKVSN--SLIDMYSRCGCIDLARQVFDRMP-QRTLVSWNSIIVGFAVNGLADEALSYFNS 318
Query: 448 LIE--IDPNNGGY--GIMLANIYGELGK----WDEVRKVRKMLKDRNAYKTPGC 493
+ E P+ Y +M + G +G+ ++ +++VR++L Y GC
Sbjct: 319 MQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFEHMKRVRRILPRIEHY---GC 369
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 122/286 (42%), Gaps = 42/286 (14%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD L N +TA+I + + H A +R+M G P+ V+ +C +
Sbjct: 183 VFDGLPVKNAISWTALIGGFVKKDYH-EEALECFREMQLSGV-APDYVTVIAVIAACAN- 239
Query: 128 LESRGTKM-VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
L + G + VH ++ F V +L++ YSR G I +AR++FD M R +VSW +
Sbjct: 240 LGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGC-IDLARQVFDRMPQRTLVSWNS 298
Query: 187 MISGYTRVGDIKNAASLFDSMPDR----DVPAWNSVIAGCTQNGLFSDAISFFRRM---- 238
+I G+ G A S F+SM + D ++ + C+ GL + + F M
Sbjct: 299 IIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFEHMKRVR 358
Query: 239 ------------------------GMEVSDN--IRPNQVTLVCALSAIGHTGMLQLGKVI 272
+ V N ++PN+V L L+A G + L + +
Sbjct: 359 RILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRTQGNIGLAENV 418
Query: 273 HGYVYR--NGLDLDSFISNALIDMYGKC-GSLKEARRAFDRNSKKR 315
Y+ +G D + + + + GK G+ K RR +R +K+
Sbjct: 419 MNYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKK 464
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 280/519 (53%), Gaps = 47/519 (9%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLT-YARFIFDHLTTPN 76
A+ RC + +KQ+ + + G +L+ ++ + T +AR +FD + P+
Sbjct: 13 ALWRRCRSLRQIKQVHALMVLRGFLSDPSALRELIFASSVGVRGGTAHARLVFDRIPHPD 72
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRR-----GQPQPNQFIYPHVLKSCPDVLESR 131
++Y +I A A A S+Y M R G +P++ +P VL++C + S
Sbjct: 73 RFMYNTLIRGAAHSYA-PRDAVSIYARMARHSAGCGGGVRPDKRTFPFVLRACAAMGASE 131
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG- 190
VH +VK+G E V AL+ ++ G D+G A LFD + + V+W+AMISG
Sbjct: 132 TGAQVHAHVVKAGCESDAFVRNALIGMHATCG-DLGAAAALFDGEAREDAVAWSAMISGF 190
Query: 191 ------------------------------YTRVGDIKNAASLFDSMPDRDVPAWNSVIA 220
Y ++GD+ A LFD PDRDV +WN++I+
Sbjct: 191 ARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMIS 250
Query: 221 GCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR-- 278
G + G A+ F +M + +P+ VT++ LSA +G + G+ +H ++
Sbjct: 251 GYVRCGSHKQAMELFEQM---QAMGEKPDTVTMLSLLSACADSGDMDAGRRLHRFLSGRF 307
Query: 279 NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICV 338
+ + + + NALIDMY KCGS+ A F K +++WNS+I ALHG +I V
Sbjct: 308 SRIGPSTVLGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVTEAIDV 367
Query: 339 FEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVD 398
F++M++ N++PD +TF+++L AC+HGG+V++G YF LM + Y IEP ++HYGC+VD
Sbjct: 368 FQKMLQ---GNVKPDEITFVAVLVACSHGGMVDKGHEYFNLMQQRYMIEPNVKHYGCMVD 424
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGY 458
+L RAG +EA E + MKIEP+ V+W +LL C+I+G + AE A ++L++ + G
Sbjct: 425 MLSRAGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGELELAEHANQELLKARSDASGD 484
Query: 459 GIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
++L+NIY +G+W +RK++ D K GC+ ++
Sbjct: 485 FVLLSNIYASVGEWLGSENMRKLMDDSGVNKEAGCAVVD 523
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 258/462 (55%), Gaps = 40/462 (8%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR + + N+ +MI Y H +S + ++ + P+ +P VLK+
Sbjct: 42 ARIFSKYRGSINSQQCNSMIRTYLDLNKHLNSLYIF--ALMHKFSILPDSSTFPAVLKAT 99
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ ++ KM+H +++ GF + D V +
Sbjct: 100 AQLCDTGVGKMIHGIVIQMGF------------------------------ICD--VYTS 127
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
TA++ Y I +A+ LFD MP+R+ WN++I G T N F AI FR M ++D
Sbjct: 128 TALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGM---LAD 184
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+P++ T+V LSA H G GK IH ++Y N L L+ F+ ALIDMY KCG++ E
Sbjct: 185 GAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEV 244
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ F+ +K + +WN +I+ +A++GQ + ++ F M+ N +PD VTF+ +L AC
Sbjct: 245 EKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLM---ENFKPDEVTFLGVLCAC 301
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
H GLV +GR F M + + ++P+IEHYGC+VDLLGRAG EEALE+++ M IEPD ++
Sbjct: 302 CHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPII 361
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
W +LL C+++G T E+ +K+LIE++PNNG ++L+NIY +W EV K+R M+
Sbjct: 362 WRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMSL 421
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
R K PGCS IE++ V++F + + P E IY L++++
Sbjct: 422 RGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLI 463
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 126/300 (42%), Gaps = 45/300 (15%)
Query: 54 FCT-LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQP 112
+CT L +S+ A +FD + N + A+IT Y A +R M+ G QP
Sbjct: 134 YCTCLSISD---ASQLFDEMPERNAVTWNALITGYTHNRKFVK-AIDAFRGMLADG-AQP 188
Query: 113 NQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKL 172
++ VL +C + K +H I + V TAL++ Y++ G + K+
Sbjct: 189 SERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGA-VYEVEKV 247
Query: 173 FDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAI 232
F+E+ ++NV +W +ISGY NG A+
Sbjct: 248 FEEIREKNVYTWNVLISGY-------------------------------AMNGQGDAAL 276
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN--A 290
F RM ME N +P++VT + L A H G++ G+ + L I +
Sbjct: 277 QAFSRMLME---NFKPDEVTFLGVLCACCHQGLVTEGR-WQFMSMKQQFGLQPRIEHYGC 332
Query: 291 LIDMYGKCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
++D+ G+ G L+EA S + W +++ + +HG ++ + + ++ + +N
Sbjct: 333 MVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNN 392
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/475 (35%), Positives = 260/475 (54%), Gaps = 25/475 (5%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + NT + +++ Y Q S A ++ M R I +V +
Sbjct: 13 ARKLFDKMPETNTISWNGLVSGYV-QNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGL 71
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ E +M +V ++E V+ AR+LFD M ++VV+
Sbjct: 72 IEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDE----------ARQLFDMMPVKDVVAS 121
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS- 243
T MI G G + A +FD MP R+V AW S+I+G +G +S I + R G E+
Sbjct: 122 TNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEA 181
Query: 244 ---------DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
+ +RP+ +++ LS G L G+ +H + R+ D+D ++S+ LI M
Sbjct: 182 LALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITM 241
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KCG L A+R FDR S K + WNS+I +A HG E ++ VF +M +I PD
Sbjct: 242 YIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMF---SSSIAPDE 298
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
+TFI +L+AC++ G V++G F+ M Y+++P+ EHY C+VDLLGRAG+ EA+ +++
Sbjct: 299 ITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIE 358
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M +E D +VWG+LL C+ + D AE A KKL++++PNN G I+L+N+Y +W +
Sbjct: 359 NMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKD 418
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKT-HPRTEEIYDALESMVAL 528
V ++RK ++ +N K+PGCSWIEVDK+VH F T HP E I L + AL
Sbjct: 419 VVELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGAL 473
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 140/360 (38%), Gaps = 81/360 (22%)
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
++GY + + A LFD MP+ + +WN +++G QNG+ S+A F +M
Sbjct: 1 MAGYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMP-------E 53
Query: 248 PNQVTLVCALSAIGHTGMLQLGK----------VIHGYVYRNGLDLDSFISNA--LIDMY 295
N V+ + G+++ + V+ V GL D + A L DM
Sbjct: 54 RNVVSWTAMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMM 113
Query: 296 -------------GKC--GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFE 340
G C G L EAR FD ++ + +W SMI+ G I ++E
Sbjct: 114 PVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYE 173
Query: 341 E----------MMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR-AYFKLMTKTYRIE-- 387
Q +RP + IS+L+ C ++ GR + +L+ + I+
Sbjct: 174 RKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIY 233
Query: 388 ---------------------------PQIEHYGCLVDLLGRAGRFEEALEVVKGM---K 417
I + ++ + G E+ALEV M
Sbjct: 234 VSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSS 293
Query: 418 IEPDEVVWGSLLNGCKIYGRT-DFAEF--AVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
I PDE+ + +L+ C G+ + E ++K ++DP Y M+ ++ G GK +E
Sbjct: 294 IAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMV-DLLGRAGKLNE 352
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 83/211 (39%), Gaps = 38/211 (18%)
Query: 16 VLAILERCNHI---NHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
V+++L C + +H +Q+ S L Q + Y ++ +K +L A+ +FD
Sbjct: 200 VISVLSVCGSLASLDHGRQVHSQLVR-SQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRF 258
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
++ + ++ ++I YA Q A ++ DM P++ + VL +C
Sbjct: 259 SSKDIVMWNSIIAGYA-QHGFGEKALEVFHDMF-SSSIAPDEITFIGVLSACS------- 309
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+T VK G E + +++ D + M+
Sbjct: 310 ----YTGKVKEGLEIFESMKSKY--------------------QVDPKTEHYACMVDLLG 345
Query: 193 RVGDIKNAASLFDSMP-DRDVPAWNSVIAGC 222
R G + A +L ++MP + D W +++ C
Sbjct: 346 RAGKLNEAMNLIENMPVEADAIVWGALLGAC 376
>gi|297729191|ref|NP_001176959.1| Os12g0490100 [Oryza sativa Japonica Group]
gi|255670316|dbj|BAH95687.1| Os12g0490100 [Oryza sativa Japonica Group]
Length = 451
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 244/448 (54%), Gaps = 39/448 (8%)
Query: 110 PQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG------------------------- 144
P+PN F V+K C V VH + K+G
Sbjct: 6 PRPNAFTVTSVIKCCSKVRAVHEGLQVHAFLAKAGLGCSSVHVGAALLDLYGNIGLVGDA 65
Query: 145 ---FEQYPV----VETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
F++ PV V +V R+G D+G AR++FD M++R+ +SW ++SGY +GD
Sbjct: 66 RRVFDEMPVKNVVVGNTMVACNVRAG-DMGAAREVFDGMAERDPISWNTLMSGYLHLGDT 124
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
LFD M R+V +WN++IA C++ G +D + F RM + P+ T+ +
Sbjct: 125 ATVRELFDEMTVRNVNSWNTMIAACSEEGSLADTVKVFNRMR---ATGFEPDAATMAVLM 181
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
SA G L + +HG + ++ ++++ + N+LIDMY KCG + +A+ F K
Sbjct: 182 SACAQLGSLTIAGQVHGLLQKSCVEMNCHVQNSLIDMYAKCGCISQAQFLFTETYPKDTV 241
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
S+N MI +FA HG + +++ +F M+ D ++PD VTF+ +L+AC H GLVE G+ YF
Sbjct: 242 SYNVMIIAFAQHGHARDALDLFNAMV---DSGLQPDAVTFLGVLSACAHAGLVEYGKNYF 298
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
+LM TY ++ +HY C+VDL GRAG EEA VK M ++P VWG+LLN C+ +
Sbjct: 299 ELMKTTYAVQQSPDHYACVVDLYGRAGLIEEAHCFVKTMPVKPHAGVWGALLNACRKHCH 358
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
D E A K+LI I+P N G ++L N +WD V V+ ++ + KT GCSW+E
Sbjct: 359 VDVGEIAAKELIRIEPKNPGNYVLLRNTLARGQQWDAVEDVQLSMRRKVIDKTAGCSWVE 418
Query: 498 VDKQVHQFHSLDKTHPRTEEIYDALESM 525
VD VH+F + D HP+ +EIY LE +
Sbjct: 419 VDSVVHEFLAGDFYHPKFDEIYTILEHL 446
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K ++ A+F+F +T Y MI A+A Q HA A L+ MV G QP+ +
Sbjct: 221 KCGCISQAQFLFTETYPKDTVSYNVMIIAFA-QHGHARDALDLFNAMVDSGL-QPDAVTF 278
Query: 118 PHVLKSCPDV-LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSG 163
VL +C L G +Q P +V+ Y R+G
Sbjct: 279 LGVLSACAHAGLVEYGKNYFELMKTTYAVQQSPDHYACVVDLYGRAG 325
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 258/462 (55%), Gaps = 40/462 (8%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR + + N+ +MI Y H +S + ++ + P+ +P VLK+
Sbjct: 42 ARIFSKYRGSINSQQCNSMIRTYLDLNKHLNSLYIF--ALMHKFSILPDSSTFPAVLKAT 99
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ ++ KM+H +++ GF + D V +
Sbjct: 100 AQLCDTGVGKMIHGIVIQMGF------------------------------ICD--VYTS 127
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
TA++ Y I +A+ LFD MP+R+ WN++I G T N F AI FR M ++D
Sbjct: 128 TALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGM---LAD 184
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+P++ T+V LSA H G GK IH ++Y N L L+ F+ ALIDMY KCG++ E
Sbjct: 185 GAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEV 244
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ F+ +K + +WN +I+ +A++GQ + ++ F M+ N +PD VTF+ +L AC
Sbjct: 245 EKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLM---ENFKPDEVTFLGVLCAC 301
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
H GLV +GR F M + + ++P+IEHYGC+VDLLGRAG EEALE+++ M IEPD ++
Sbjct: 302 CHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPII 361
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
W +LL C+++G T E+ +K+LIE++PNNG ++L+NIY +W EV K+R M+
Sbjct: 362 WRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMNL 421
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
R K PGCS IE++ V++F + + P E IY L++++
Sbjct: 422 RGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLI 463
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 126/300 (42%), Gaps = 45/300 (15%)
Query: 54 FCT-LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQP 112
+CT L +S+ A +FD + N + A+IT Y A +R M+ G QP
Sbjct: 134 YCTCLSISD---ASQLFDEMPERNAVTWNALITGYTHNRKFVK-AIDAFRGMLADG-AQP 188
Query: 113 NQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKL 172
++ VL +C + K +H I + V TAL++ Y++ G + K+
Sbjct: 189 SERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGA-VYEVEKV 247
Query: 173 FDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAI 232
F+E+ ++NV +W +ISGY NG A+
Sbjct: 248 FEEIREKNVYTWNVLISGY-------------------------------AMNGQGDAAL 276
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN--A 290
F RM ME N +P++VT + L A H G++ G+ + L I +
Sbjct: 277 QAFSRMLME---NFKPDEVTFLGVLCACCHQGLVTEGR-WQFMSMKQQFGLQPRIEHYGC 332
Query: 291 LIDMYGKCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
++D+ G+ G L+EA S + W +++ + +HG ++ + + ++ + +N
Sbjct: 333 MVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNN 392
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/526 (33%), Positives = 284/526 (53%), Gaps = 50/526 (9%)
Query: 4 VTNQLNQTLNQQVLAILERCNHINHLKQLQSF-LTTLGQSQTNFYAFKLVRFCTLK--LS 60
V NQL+ L++L +C +N LKQ+Q++ + T QS + KL+ FCTL S
Sbjct: 26 VINQLHP------LSLLSKCTSLNELKQIQAYTIKTNLQSDISVLT-KLINFCTLNPTTS 78
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
+ +A +FD + + L+ M YA + AFSL+ +++ G P+ + + +
Sbjct: 79 YMDHAHHLFDQILDKDIILFNIMARGYARSNS-PYLAFSLFGELLCSGL-LPDDYTFSSL 136
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
LK+C R +H VK G + N
Sbjct: 137 LKACASSKALREGMGLHCFAVKLGL--------------------------------NHN 164
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
+ +I+ Y D+ A +FD M + ++N++I G ++ ++A+S FR +
Sbjct: 165 IYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQ- 223
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ NI P VT++ + + G L LGK IH YV + G D ++ ALIDM+ KCGS
Sbjct: 224 --ASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGS 281
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
L +A F+ + +W++MI +FA HG +I +FEEM R +RPD +TF+ L
Sbjct: 282 LTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKR---EGVRPDEITFLGL 338
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L AC+H GLVEQGR YF M+KTY I P I+HYGC+VDLLGRAG +EA V ++I+
Sbjct: 339 LYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKA 398
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
++W +LL+ C +G + A+ ++++ E+D +GG ++L+N+Y +G+W++V +RK
Sbjct: 399 TPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRK 458
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
++KDR K PGCS +EV+ VH+F S D H + E+ AL+ ++
Sbjct: 459 LMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELM 504
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 166/469 (35%), Positives = 261/469 (55%), Gaps = 17/469 (3%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + AR FD + + + +IT YA Q A L+ + P + F
Sbjct: 225 VKKKKIVEARQFFDSMKVRDVVSWNTIITGYA-QNGEIDEARQLFDE-----SPVHDVFT 278
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ ++ +++R + ++ E+ V A++ Y + G + +A++LFD M
Sbjct: 279 WTAMVSG---YIQNRMVEEAR-ELFDRMPERNEVSWNAMLAGYVQ-GERVEMAKELFDVM 333
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
RNV +W MI+GY + G I A +LFD MP RD +W ++IAG +Q+G +A+ F
Sbjct: 334 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFV 393
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M E R N+ + ALS L+LGK +HG + + G + F+ NAL+ MY
Sbjct: 394 LMEREGG---RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 450
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCGS++EA F + K + SWN+MI ++ HG E ++ FE M R ++PD T
Sbjct: 451 KCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKR---EGLKPDDAT 507
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+++L+AC+H GLV++GR YF MT+ Y + P +HY C+VDLLGRAG EEA ++K M
Sbjct: 508 MVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNM 567
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
EPD +WG+LL +++G T+ AE A K+ ++P N G ++L+N+Y G+W +V
Sbjct: 568 PFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVG 627
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K+R ++D+ K PG SWIE+ + H F D+ HP +EI+ LE +
Sbjct: 628 KLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDL 676
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 151/313 (48%), Gaps = 29/313 (9%)
Query: 145 FEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
F++ P V A+++ Y R+G + +AR LFDEM +R++VSW MI GY R ++ A
Sbjct: 82 FKRMPRWSSVSYNAMISGYLRNG-EFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKA 140
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
LF+ MP+RDV +WN++++G QNG DA F RM N V+ LSA
Sbjct: 141 RELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMP-------EKNDVSWNALLSAY 193
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
L+ V+ G R L S+ N L+ + K + EAR+ FD + + SWN
Sbjct: 194 VQNSKLEEACVLFG--SRENWALVSW--NCLLGGFVKKKKIVEARQFFDSMKVRDVVSWN 249
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
++I +A +G+ + + +F+E H++ T+ ++++ +VE+ R F M
Sbjct: 250 TIITGYAQNGEIDEARQLFDE---SPVHDV----FTWTAMVSGYIQNRMVEEARELFDRM 302
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+ + + ++ + R E A E+ M + W +++ G G+
Sbjct: 303 PERNEVS-----WNAMLAGYVQGERVEMAKELFDVMPCR-NVSTWNTMITGYAQCGKISE 356
Query: 441 AEFAVKKLIEIDP 453
A+ K+ + DP
Sbjct: 357 AKNLFDKMPKRDP 369
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 137/341 (40%), Gaps = 60/341 (17%)
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
D ++ W IS Y R G A +F MP ++N++I+G +NG F A F
Sbjct: 56 DSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDE 115
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M P + + + G+ LGK + D+ S+ N ++ Y +
Sbjct: 116 M---------PERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSW--NTILSGYAQ 164
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFE----------------- 340
G + +ARR FDR +K SWN++++++ + + E + +F
Sbjct: 165 NGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGF 224
Query: 341 -------EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF------KLMTKTYRIE 387
E + D D V++ +++ G +++ R F + T T +
Sbjct: 225 VKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVS 284
Query: 388 PQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKK 447
I++ EEA E+ M E +EV W ++L G Y + + E A K+
Sbjct: 285 GYIQNR-----------MVEEARELFDRMP-ERNEVSWNAMLAG---YVQGERVEMA-KE 328
Query: 448 LIEIDP--NNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
L ++ P N + M+ Y + GK E + + + R+
Sbjct: 329 LFDVMPCRNVSTWNTMITG-YAQCGKISEAKNLFDKMPKRD 368
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/464 (35%), Positives = 263/464 (56%), Gaps = 39/464 (8%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR FD + PN + TAM + Y S L+R M+ V S
Sbjct: 148 ARRAFDEIPDPNPVIVTAMASGYVRNNLVYHS-LELFRAMIASDSASVVDEAAALVAFSA 206
Query: 125 PDVLESRG-TKMVHTQIVKSGFEQYPVVETALVNSYSRSGN-DIGIARKLFDEMSDRNVV 182
+ RG T +H I K GFE+ V +++SY++ G+ D+ +ARK+
Sbjct: 207 SARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKV---------- 256
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
FD+M +RDV +WNS+IA QNG+ ++AI + +M + V
Sbjct: 257 ---------------------FDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKM-LNV 293
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
I+ N V L L A H G +Q GK IH V R GL+ + ++ +++DMY KCG ++
Sbjct: 294 GGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVE 353
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
A RAF + +K + SW++MI + +HG+ + ++ +F EM R +RP+ +TFIS+L
Sbjct: 354 MASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRS---GLRPNYITFISVLA 410
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H GL+++GR ++ M + + IE +EHYGC+VDLLGRAG +EA ++K MK++PD
Sbjct: 411 ACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDA 470
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
+WG+LL+ C+I+ + AE +VK+L E+D +N GY ++L+NIY E W +V ++R ++
Sbjct: 471 AIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLV 530
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K R K PG S E+ +++ F+ DK+HP+ EIY LE ++
Sbjct: 531 KTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLL 574
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 273/521 (52%), Gaps = 44/521 (8%)
Query: 6 NQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYA 65
N QT + + ++ N +++ + L G Q F A KL+ +L ++ A
Sbjct: 75 NPTQQTFEHLIYSCAQK-NSLSYGLDVHRCLVDSGFDQDPFLATKLINM-YYELGSIDRA 132
Query: 66 RFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
+FD Y++ A+ A A H LY M G P ++F Y +VLK+C
Sbjct: 133 LKVFDETRERTIYVWNALFRALA-MVGHGKELLDLYIQMNWIGTPS-DRFTYTYVLKACV 190
Query: 126 ----DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
V R K +H I++ G+E N+
Sbjct: 191 VSELSVCPLRKGKEIHAHILRHGYEA--------------------------------NI 218
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
T ++ Y + G + A S+F +MP ++ +W+++IA +N + A+ F+ M E
Sbjct: 219 HVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFE 278
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+++ PN VT+V L A L+ GK+IHGY+ R LD + NALI MYG+CG +
Sbjct: 279 ACNSV-PNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEV 337
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+R FD K+ + SWNS+I+ + +HG + +I +FE M+ + P ++FI++L
Sbjct: 338 LMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIH---QGVSPSYISFITVL 394
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
AC+H GLVE+G+ F+ M YRI P +EHY C+VDLLGRA R EA+++++ M EP
Sbjct: 395 GACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPG 454
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
VWGSLL C+I+ + AE A L E++P N G ++LA+IY E W E + V K+
Sbjct: 455 PTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMKL 514
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
L+ R K PGCSWIEV ++V+ F S+D+ +P+ EEI+ L
Sbjct: 515 LEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALL 555
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 145/338 (42%), Gaps = 37/338 (10%)
Query: 109 QPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGI 168
+P P Q + H++ SC VH +V SGF+Q P + T L+N Y G+ I
Sbjct: 73 EPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGS-IDR 131
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
A K+FDE +R + W A+ VG K L+ M P
Sbjct: 132 ALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTP--------------- 176
Query: 229 SDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS 288
SD V C +S + L+ GK IH ++ R+G + + +
Sbjct: 177 --------------SDRFTYTYVLKACVVSELS-VCPLRKGKEIHAHILRHGYEANIHVM 221
Query: 289 NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDH 348
L+D+Y K GS+ A F K SW++MI FA + ++ +F+ MM +
Sbjct: 222 TTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMF-EAC 280
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
N P+ VT +++L AC +EQG+ + + +++ + L+ + GR G
Sbjct: 281 NSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRR-QLDSILPVLNALITMYGRCGEVLM 339
Query: 409 ALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
V MK + D V W SL++ IYG F + A++
Sbjct: 340 GQRVFDNMK-KRDVVSWNSLIS---IYGMHGFGKKAIQ 373
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/515 (32%), Positives = 289/515 (56%), Gaps = 42/515 (8%)
Query: 14 QQVLAILERCNHINHLKQLQS-FLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFD 70
Q+ L +L+RCN+I+ KQ+ + F+ ++F A ++ C +++ YA IF
Sbjct: 32 QECLYLLKRCNNIDEFKQVHARFIKLSLFCSSSFSASSVLAKCAHSGWENSMNYAASIFR 91
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ P T+ + MI Y ++ + A Y +M+ RG +P+ F YP +LK+C +
Sbjct: 92 GIDDPCTFDFKTMIRGYVNEMSF-EVALCFYNEMMERG-IEPDNFTYPCLLKACTRLKAI 149
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
R K +H + K G E V+ +L+N Y R
Sbjct: 150 REGKQIHGHVFKLGLEADVFVQNSLINMYGR----------------------------- 180
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
G+++ ++++F+ + + +W+S+ + C G++S+ + FR M E N++ +
Sbjct: 181 ---CGEMELSSTVFEKLEFKSAASWSSMFSACVGMGMWSECLMLFREMCRET--NLKAEE 235
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
+V ALSA +TG L LG IHG++ RN +L+ + +L+DMY KCG + A F +
Sbjct: 236 SGMVSALSACANTGALNLGMSIHGFLLRNISELNIIVKTSLVDMYVKCGCIDNALHIFQK 295
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
K+ ++++MI+ FALHG+ E+++ +F EM++ + PD V ++SLLNAC+H GLV
Sbjct: 296 MEKRNNLTYSAMISGFALHGEGESALRMFSEMIK---EGLEPDHVVYVSLLNACSHSGLV 352
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
++GR F M K ++EP EHYGCLVDLLGRAG EEALE ++ + IE ++VVW S L+
Sbjct: 353 KEGRRVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEQNDVVWRSFLS 412
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
C+++ + + A ++L+++ +N G ++++N+Y + WD+V + R + + +T
Sbjct: 413 QCRVHQNIELGQIAAQELLKLCSHNPGDYLLISNMYSQAHMWDDVARSRTEIAIKGLKQT 472
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PG S ++V + H+F S D++HP+ +EIY L M
Sbjct: 473 PGFSTVKVKGKTHRFVSQDRSHPQCKEIYKMLHQM 507
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 154/372 (41%), Positives = 233/372 (62%), Gaps = 7/372 (1%)
Query: 151 VETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR 210
V ++LV Y G+ + AR +FDEM+ R+VV+W MI+GY + GD +A LFD+MP+R
Sbjct: 115 VSSSLVQLYCTCGH-VADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHARELFDAMPER 173
Query: 211 DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK 270
+V +W +VI G Q A+ FRRM +E I + V L+ L+A G G + LG+
Sbjct: 174 NVVSWTTVIGGYAQMKRPEKAVEVFRRMQVE---GIEADGVALLSVLAACGDLGAVDLGE 230
Query: 271 VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG 330
+H +V R GL + + N++IDMY KCG +++A F+ +K + +W ++I FALHG
Sbjct: 231 WVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHG 290
Query: 331 QSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQI 390
++ +F M R N+ P+ VTF+++L+AC+H GL + GR YF +M YRI+P++
Sbjct: 291 LGLQAVEMFCRMER---ENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRV 347
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE 450
EHYGC+VDLLGRAG +EA ++VK M ++ + +WG+LL + +G E A+ LIE
Sbjct: 348 EHYGCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALLHLIE 407
Query: 451 IDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDK 510
++PNN G I+L+NI+ E +W +V K+RK +++R PG S IEVD VH+F S D
Sbjct: 408 LEPNNSGNYILLSNIFAEQERWGDVSKLRKAMRERGLRNVPGASSIEVDGMVHEFTSRDW 467
Query: 511 THPRTEEIYDAL 522
+HP I + L
Sbjct: 468 SHPFIHTICEVL 479
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 43/280 (15%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + +AR +FD + N +T +I YA Q A ++R M G + +
Sbjct: 155 VKAGDQAHARELFDAMPERNVVSWTTVIGGYA-QMKRPEKAVEVFRRMQVEGI-EADGVA 212
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
VL +C D+ + VH +V+ G Q + ++++ Y + G I A ++F+ M
Sbjct: 213 LLSVLAACGDLGAVDLGEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGC-IEKAVEVFEGM 271
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+++VV+WT +I+G+ +GL A+ F
Sbjct: 272 EEKSVVTWTTLIAGF-------------------------------ALHGLGLQAVEMFC 300
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV---YRNGLDLDSFISNALID 293
RM E N+ PN VT + LSA H G+ LG+ + YR ++ + ++D
Sbjct: 301 RMERE---NMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVEHY--GCMVD 355
Query: 294 MYGKCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQS 332
+ G+ G LKEA+ K W +++ + HG +
Sbjct: 356 LLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDA 395
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 256/461 (55%), Gaps = 20/461 (4%)
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
PN +T++I++YA H A L+ M +G + + V+ C D+ K
Sbjct: 141 PNLVTWTSLISSYARSGWH-EEAMELFGLMRMKGVEVSGEALAV-VISICADLGAFVRAK 198
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
++H VK GFE+Y V++AL+ Y + G D+ A LF EM ++++ SW A+I+ +
Sbjct: 199 IIHEYAVKGGFEEYSFVKSALICVYGKHG-DVNGAWNLFLEMKNKSLASWNALITSHAEA 257
Query: 195 GDIKNAASLFDSMPDR--------DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
G A +F + +V +W+++I G G +A+ FRRM I
Sbjct: 258 GLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQ---HAKI 314
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
N VT+ LS L LG+ IHG+V R + + + N L++MY KCG LKE
Sbjct: 315 LANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHM 374
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F++ +K L SWNSMI + +HG N++ F++M++ +PDGVTF+++L++C+H
Sbjct: 375 IFEKTERKDLISWNSMITGYGMHGLGMNALETFDQMIKL---GFKPDGVTFVAVLSSCSH 431
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GLV +GR F M K YRIEPQ+EHY C+VDLLGRAG EA E+VK M + P+ VWG
Sbjct: 432 SGLVHEGRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWG 491
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEID--PNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
+LLN C+++ T+ AE L + G Y ++L+NIY G+W++ +VR K
Sbjct: 492 ALLNSCRMHNNTEIAEETASHLFNLSHRETTGTY-MLLSNIYAASGRWEDSARVRTSAKT 550
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ K PG SWI+V+K V+ F + + E+I++ LE +
Sbjct: 551 KGLKKNPGQSWIKVEKNVYTFSAGNNMQRGFEQIFEILEEL 591
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 139/292 (47%), Gaps = 15/292 (5%)
Query: 97 AFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALV 156
A S+ +R+ + F +P V+++C + K +H +++ GF+ + V L+
Sbjct: 25 AISVMPRRMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELI 84
Query: 157 NSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR----DV 212
Y++ G + AR LFD MS R+ +SW M+S Y D A +F M ++
Sbjct: 85 GMYAKLGR-MRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNL 143
Query: 213 PAWNSVIAGCTQNGLFSDAISFF---RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
W S+I+ ++G +A+ F R G+EVS L +S G
Sbjct: 144 VTWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGE------ALAVVISICADLGAFVRA 197
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
K+IH Y + G + SF+ +ALI +YGK G + A F K L SWN++I S A
Sbjct: 198 KIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEA 257
Query: 330 GQSENSICVFEEMMRCQD-HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
G + ++ +F ++ R D +RP+ V++ ++++ G ++ F+ M
Sbjct: 258 GLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRM 309
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
T + A + G LGK IHG+V G + N LI MY K G +++AR FDR
Sbjct: 44 TFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLFDRM 103
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
S + SWN+M++++A + ++ +F+ M + + P+ VT+ SL+++ G E
Sbjct: 104 SVRSYISWNTMVSAYAFNYDCNGALEIFQRM---ESEGMEPNLVTWTSLISSYARSGWHE 160
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEA 409
+ F LM + +E E ++ + G F A
Sbjct: 161 EAMELFGLM-RMKGVEVSGEALAVVISICADLGAFVRA 197
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/523 (32%), Positives = 292/523 (55%), Gaps = 51/523 (9%)
Query: 16 VLAILERC---------NHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN---LT 63
+L ++E+C + + L+Q+ +F G S ++ K + F + L + ++
Sbjct: 11 LLPMVEKCINLLQTYGVSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMS 70
Query: 64 YARFIFDHLTTP-NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
YA +F + P N +++ +I YA + ++ SA SLYR+M G +P+ YP +LK
Sbjct: 71 YAHKVFSKIEKPINVFIWNTLIRGYA-EIGNSVSAVSLYREMRASGFVEPDTHTYPFLLK 129
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
+ + + R + +H+ +++SGF V+ +L++ Y+ G
Sbjct: 130 AVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG------------------- 170
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
D+ +A +FD MP++D+ AWNSVI G +NG +A++ + M ++
Sbjct: 171 -------------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLK- 216
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
I+P+ T+V LSA G L LGK H Y+ + GL + SN L+D+Y +CG ++
Sbjct: 217 --GIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVE 274
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
EA+ FD K SW S+I A++G + +I +F+ M + P +TF+ +L
Sbjct: 275 EAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNME--SKEGLLPCEITFVGILY 332
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H G+V++G YF+ M++ Y+IEP+IEH+GC+VDLL RAG+ ++A E + M ++P+
Sbjct: 333 ACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNV 392
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
V+W +LL C ++G +D AE A K+++++PN+ G ++L+N+Y +W +V+K+RK +
Sbjct: 393 VIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQM 452
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PG S +EV +VH+F DK+HP+ + IY L+ M
Sbjct: 453 LRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEM 495
>gi|413938708|gb|AFW73259.1| hypothetical protein ZEAMMB73_606431 [Zea mays]
Length = 488
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 236/396 (59%), Gaps = 10/396 (2%)
Query: 133 TKMVHTQIVKSGFEQ---YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
+ +H +VKSG + + T+L+ +Y+R G + ARK+FD M+DR VV+W ++
Sbjct: 80 AEQIHALLVKSGGSRAVSHVQAFTSLIRAYARLGR-VCDARKVFDGMADRTVVTWNVLLD 138
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
R GD+ A +F MP R+ +WN++I+G +NG A+ F + M V+ + P+
Sbjct: 139 ALIRDGDLDAAWEVFVKMPQRNAVSWNTIISGFARNGWAPVAVDLF--IEMTVAYGLAPD 196
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+ T+V +SA+ G+L +GK HGYV R LD + AL+ MY +CGS+ A F
Sbjct: 197 EATMVGFVSAVRDIGLLAIGKSAHGYVLRREFSLDGPLGVALVSMYTRCGSMGAAHSCFL 256
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
+ K + W S+I FA HGQ EN++ +F EM + I P+GVTF+++L+AC+HGGL
Sbjct: 257 SVTTKNVEHWTSLIAGFAAHGQPENALRLFVEMRQV---GIEPNGVTFVAVLSACSHGGL 313
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
V++G YF LM ++ I P I+HYGCLVDLLGRAG +EA + + +P V+W SLL
Sbjct: 314 VDEGFKYFDLM-RSMGIRPMIQHYGCLVDLLGRAGFLKEAFNLASNLPEDPGFVIWSSLL 372
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
C+ +G + AE KL E P++G ++L+N Y +W++ ++ R+ +++ K
Sbjct: 373 AACRSHGNVEMAELTASKLAEAKPSHGSSYVLLSNTYARAEQWEDSKRTRRRMEEHRVAK 432
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PG SWIE+D VH F + DK H +E IY LE +
Sbjct: 433 KPGLSWIEIDGSVHSFATADKLHIESEGIYHMLEDL 468
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/509 (34%), Positives = 272/509 (53%), Gaps = 41/509 (8%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTY 78
+++ C + K++ + LG F A LV + + + AR +FD + +
Sbjct: 3 VVKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYS-RFGLVGDARKLFDDMPARDRG 61
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHT 138
+ AMI+ Y Q +A+ A + +M G + + VL C V + K++H
Sbjct: 62 SWNAMISGYC-QNGNAAEALDIADEMRLEGV-KMDAITVASVLPVCAQVGDILSGKLIHL 119
Query: 139 QIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIK 198
++K G E V AL+N Y++ G+ +G A+K+F
Sbjct: 120 YVIKHGLEFELFVSNALINMYAKFGS-LGHAQKVF------------------------- 153
Query: 199 NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
+ +DV +WN++I G QNGL S+AI + + ME + I PNQ T V L
Sbjct: 154 -------GLLIKDVVSWNTLITGYAQNGLASEAIEVY--LLMEEHEEIIPNQGTWVSILP 204
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
A H G LQ G IHG V +N L D F+ LIDMYGKCG L +A F + +K
Sbjct: 205 AYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVP 264
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
WN+MI+ + +HG E ++ +F EM + ++PD +TF+SLL+AC+H GLV + F
Sbjct: 265 WNAMISCYGVHGDGEKALELFREM---KAERVKPDHITFVSLLSACSHSGLVSDAQWCFN 321
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
+M + Y I+P ++HYGC+VDL GRAG E A +K M I+PD WG+LLN C+I+G
Sbjct: 322 MMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNI 381
Query: 439 DFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV 498
+ + A ++L E+D N GY ++L+NIY +GKW+ V VR + +DR K PG S I +
Sbjct: 382 ELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSIIL 441
Query: 499 DKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+ +V F++ ++THP+ EEIY L + +
Sbjct: 442 NNKVDVFYTGNQTHPKCEEIYRELRDLTS 470
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/489 (32%), Positives = 278/489 (56%), Gaps = 10/489 (2%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
K++ + +T LG L+ +K ++ R IFD + N +Y +++ Y
Sbjct: 243 KKVCNLMTELGVKSNTLVVNALLDM-YMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYV- 300
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
Q A + +M+++GQ +P++ + +C + + K H + ++G E+
Sbjct: 301 QHGLAGEVLVVLDEMLQKGQ-RPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLD 359
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
+ A+++ Y + G A K+FD MS++ VV+W ++I+G R G+++ A +F MP+
Sbjct: 360 NISNAIIDMYMKCGKREA-ACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPE 418
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
++ +WN++I Q +F +AI R M + I+ ++VT+V SA G+ G L L
Sbjct: 419 SNLVSWNTMIGAMVQASMFEEAIDLLREMQ---NQGIKGDRVTMVGIASACGYLGALDLA 475
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
K I+ Y+ +N + +D + AL+DM+ +CG A R F+ K+ +++W + I A+
Sbjct: 476 KWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVE 535
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
G ++ +I +F+EM++ +++ D F++LL A +HGG V+QGR F M K + + PQ
Sbjct: 536 GNAKGAIELFDEMLK---QDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQ 592
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
I HYGC+VDLLGRAG EEA +++K M I+P++V+WGS L C+ + +FA +A +K+
Sbjct: 593 IVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKIT 652
Query: 450 EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLD 509
++ P G ++L+NIY GKW++V +VR +K++ K G S IEV + +F S D
Sbjct: 653 QLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGD 712
Query: 510 KTHPRTEEI 518
++H +I
Sbjct: 713 ESHTENAQI 721
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 183/426 (42%), Gaps = 49/426 (11%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYL 79
L+ C + LKQL + G N V+ T + N F D T + Y
Sbjct: 29 LQTCKTLIELKQLHCNMLKKGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYT 88
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
+I YA+ + F +Y M+ P+ F +P +L +C ++ VH
Sbjct: 89 CNTLIRGYAASGLCKEAIF-IYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGV 147
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
+VK G + V +L++ Y+ G + + RK+F
Sbjct: 148 VVKMGLVKDLFVANSLIHFYAACGK-VDLGRKVF-------------------------- 180
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
D M +R+V +W S+I G + + +A+ F M V + PN VT+VCA+SA
Sbjct: 181 -----DEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEM---VEVGVEPNPVTMVCAISA 232
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSW 319
L+LGK + + G+ ++ + NAL+DMY KCG + R FD S K L +
Sbjct: 233 CAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMY 292
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
N++++++ HG + + V +EM++ RPD VT +S + AC G + G++
Sbjct: 293 NTIMSNYVQHGLAGEVLVVLDEMLQ---KGQRPDKVTMLSTIAACAQLGDLSVGKS---- 345
Query: 380 MTKTYRIEPQIEHY----GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
+ Y +E ++D+ + G+ E A +V M V W SL+ G
Sbjct: 346 -SHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMS-NKTVVTWNSLIAGLVRD 403
Query: 436 GRTDFA 441
G + A
Sbjct: 404 GELELA 409
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 270 KVIHGYVYRNGL-DLDSFISNALIDMYGKCGSLKEARRAF--DRNSKKRLTSWNSMINSF 326
K +H + + G+ +++ I+ A + M G SL A AF D +K L + N++I +
Sbjct: 39 KQLHCNMLKKGVFNINKLIA-ACVQM-GTHESLNYALNAFKEDEGTKCSLYTCNTLIRGY 96
Query: 327 ALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRI 386
A G + +I ++ M+ I PD TF LL+AC+ +G ++ K +
Sbjct: 97 AASGLCKEAIFIYLHMIIVM--GIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLV 154
Query: 387 EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
+ + L+ G+ + +V M +E + V W SL+NG Y + A+ AV
Sbjct: 155 K-DLFVANSLIHFYAACGKVDLGRKVFDEM-LERNVVSWTSLING---YSVVNMAKEAVC 209
Query: 447 KLIE-----IDPN 454
E ++PN
Sbjct: 210 LFFEMVEVGVEPN 222
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 180/565 (31%), Positives = 283/565 (50%), Gaps = 81/565 (14%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT- 74
+L++L++C L+Q+ + T + N + ++ L + TY+ IF H+T
Sbjct: 24 LLSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQ-----SISLKDFTYSTLIFSHITPH 78
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
PN Y + M+ A + LY M + PN F +P V +C ++ E R +
Sbjct: 79 PNDYAFNIMLRATTTTWHDYPLTLHLYHQM-KTLNISPNNFTFPFVFLACANLEEIRMAR 137
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGND---------------------------IG 167
+ H ++ K G + ++V Y R G + +G
Sbjct: 138 LAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLG 197
Query: 168 IARKLF--------------DEMS------------DRNVVSW----------------- 184
AR+ DEMS D + W
Sbjct: 198 FAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIG 257
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+A+IS Y++ G++ ++ +FD MP RD WN+ I+ QNG+ +AIS F M +
Sbjct: 258 SALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMK---EN 314
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ PN+VTL LSA G L LGK + Y GL D F++ ALIDMY KCGSL+ A
Sbjct: 315 GVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESA 374
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+R F+ +K SWN+MI++ A HG+++ ++ +FE M + + RP+ +TF+SLL+AC
Sbjct: 375 QRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSD-EGGSARPNDITFVSLLSAC 433
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
H GLV++G F +M+ + + P+IEHY C+VDLL RAG EA +V++ M +PD V
Sbjct: 434 VHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVT 493
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
G+L + C+ D E ++ L+E+DP+N G I+ + IY L WD+ ++R ++++
Sbjct: 494 LGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRE 553
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLD 509
KTPGCSWIEV Q+ +F S D
Sbjct: 554 NGVTKTPGCSWIEVGNQLREFLSGD 578
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/493 (35%), Positives = 274/493 (55%), Gaps = 27/493 (5%)
Query: 39 LGQSQTNFYAFKLVRFCTLKLSNLTYAR-FIFDHLTTPNTYLYTAMITAYASQPAHASSA 97
L Q T Y+F + T ++ + A +F + +T++ A+I AY S+ S A
Sbjct: 200 LRQRDTFTYSFLIKALATAGVTPVRAAHTHVFKLGSVEDTFVGNALIDAY-SKNDGLSDA 258
Query: 98 FSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVET---- 153
++ +M R N + V K D +S F++ P +T
Sbjct: 259 KKVFDEMTTRDVVSWNTAMAAMVRKGEVDA-------------ARSMFDEMPEKDTVSWN 305
Query: 154 ALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVP 213
+++ Y+++G + A +LF M RNVVSW+ ++S Y + GD++ A +FD MP +++
Sbjct: 306 TMLDGYAKAG-EAEEAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLV 364
Query: 214 AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH 273
W +++ C Q GL +A F M I + V +V L+A +G L LGK IH
Sbjct: 365 TWTIMVSACAQKGLVGEAGRLFTEMK---EAAIELDVVAVVSILAACAESGCLALGKRIH 421
Query: 274 GYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN-SKKRLTSWNSMINSFALHGQS 332
+V + L + + NAL+DM+ KCG + A FD +K SWN +I FA+HG
Sbjct: 422 RHVRQRKLGRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDSVSWNIIIGGFAMHGHG 481
Query: 333 ENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEH 392
E ++ +F +M + PD VT I++L+ACTH GLVE+GR +F M Y I+P+IEH
Sbjct: 482 EKALNLFTQM---KQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPEIEH 538
Query: 393 YGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
YGC+VDLLGR G +EA++++K M EP+EV+WGSLL+ C+++ ++AE A +L +
Sbjct: 539 YGCMVDLLGRGGLIKEAVDMIKSMPWEPNEVIWGSLLSACRLHKNVEYAELAANELSNLQ 598
Query: 453 PNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTH 512
P+N G +L+NIY E GKW ++ K R +K + KT G SWIE+D+ H+F D+ H
Sbjct: 599 PSNAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELDEAFHEFTVGDRKH 658
Query: 513 PRTEEIYDALESM 525
P +++I D ++ +
Sbjct: 659 PESDQISDMIDRL 671
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/478 (34%), Positives = 270/478 (56%), Gaps = 25/478 (5%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
++ L +AR +FD T + +TA+IT Y S+ H A L+ ++ + N I
Sbjct: 174 QVGELRHARLVFDKSTLRDAVSFTALITGYVSE-GHVDDARRLFDEIPAKDVVSWNAMIA 232
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN----DIG--IARK 171
+V + + T+M + + ++ +V+ S G+ ++G I
Sbjct: 233 GYVQSGRFEEALACFTRMQEADVSPN--------QSTMVSVLSACGHLRSLELGKWIGSW 284
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
+ D +N+ A++ Y++ G+I A LFD M D+DV WN++I G L+ +A
Sbjct: 285 VRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEA 344
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN----GLDLDSFI 287
+ F M + +N+ PN VT + L A G L LGK +H Y+ +N G + +
Sbjct: 345 LVLFEVM---LRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSL 401
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
++I MY KCG ++ A + F + L SWN+MI+ A++G +E ++ +FEEM+ +
Sbjct: 402 WTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMI---N 458
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE 407
+PD +TF+ +L+ACT G VE G YF M K Y I P+++HYGC++DLL R+G+F+
Sbjct: 459 EGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFD 518
Query: 408 EALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYG 467
EA ++ M++EPD +WGSLLN C+I+G+ +F E+ ++L E++P N G ++L+NIY
Sbjct: 519 EAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYA 578
Query: 468 ELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
G+WD+V K+R L D+ K PGC+ IE+D VH+F DK HP++E I+ L+ +
Sbjct: 579 GAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEV 636
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 154/507 (30%), Positives = 249/507 (49%), Gaps = 53/507 (10%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFD- 70
N L +L +C I LKQ+ S + G T F KL+ FC L S +L+YA +F
Sbjct: 25 NHPHLNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHS 84
Query: 71 -HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
H PN +++ +I A++ P +S+ L+ M+ G PN +P + KSC
Sbjct: 85 IHHQPPNIFIWNTLIRAHSLTPT-PTSSLHLFSQMLHSGL-YPNSHTFPSLFKSCAKSKA 142
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
+ K +H +K +P V T+L++ YS+ G ++ AR +FD+ + R+ VS+TA+I+
Sbjct: 143 THEAKQLHAHALKLALHLHPHVHTSLIHMYSQVG-ELRHARLVFDKSTLRDAVSFTALIT 201
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GY G + +A LFD +P +DV +WN++IAG Q+G F +A++ F RM ++ PN
Sbjct: 202 GYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQ---EADVSPN 258
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
Q T+V LSA GH L+LGK I +V G + + NAL+DMY KCG + AR+ FD
Sbjct: 259 QSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFD 318
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
K + WN+MI + E ++ +FE M+R N+ P+ VTF+++L AC G
Sbjct: 319 GMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLR---ENVTPNDVTFLAVLPACASLGA 375
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHY-------------GC--------------------- 395
++ G+ + K + + + GC
Sbjct: 376 LDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNA 435
Query: 396 LVDLLGRAGRFEEALEVVKGM---KIEPDEVVWGSLLNGCKIYGRTDFAE---FAVKKLI 449
++ L G E AL + + M +PD++ + +L+ C G + ++ K
Sbjct: 436 MISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDY 495
Query: 450 EIDPNNGGYGIMLANIYGELGKWDEVR 476
I P YG M+ ++ GK+DE +
Sbjct: 496 GISPKLQHYGCMI-DLLARSGKFDEAK 521
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/518 (33%), Positives = 270/518 (52%), Gaps = 80/518 (15%)
Query: 43 QTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYR 102
+ N ++ ++ L + AR +FD + + +TAM++ Y Q + A +L+
Sbjct: 140 ERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYC-QAGRITEARALFD 198
Query: 103 DMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRS 162
+M +R V TA+++ Y+++
Sbjct: 199 EMPKRNV----------------------------------------VSWTAMISGYAQN 218
Query: 163 GNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA-------- 214
G ++ +ARKLF+ M +RN VSWTAM+ GY + G +++AA LF++MP+ V A
Sbjct: 219 G-EVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGF 277
Query: 215 -----------------------WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
W+++I QN +A+S FR M + +RPN
Sbjct: 278 GQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREM---LWRGVRPNYP 334
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
+++ L+ +L G+ +H + R D+D F +ALI MY KCG+L +A+R F
Sbjct: 335 SVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF 394
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K + WNSMI +A HG E ++ +F +M + + PDG+T+I L AC++ G V+
Sbjct: 395 EPKDIVMWNSMITGYAQHGLGEQALGIFHDM---RLAGMSPDGITYIGALTACSYTGKVK 451
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+GR F MT I P EHY C+VDLLGR+G EEA +++K M +EPD V+WG+L+
Sbjct: 452 EGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C+++ + AE A KKL+E++P N G ++L++IY +G+W++ K+RK + RN K+P
Sbjct: 512 CRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSP 571
Query: 492 GCSWIEVDKQVHQFHSLDK-THPRTEEIYDALESMVAL 528
GCSWIE DK+VH F S D HP I LE + L
Sbjct: 572 GCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGL 609
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 191/447 (42%), Gaps = 45/447 (10%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+ N+ AR F+ + T Y A++ Y +A L+R M R N I
Sbjct: 29 RAGNIEGARAAFEAMPLRTTASYNALLAGYFRN-RLPDAALGLFRRMPSRDLASYNALIS 87
Query: 118 PHVLK--SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
L+ + PD + + F V T+L+ Y R G + A +LF +
Sbjct: 88 GLSLRRQTLPDAAAA---------LASIPFPPSVVSFTSLLRGYVRHGL-LADAIRLFQQ 137
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
M +RN VS+T ++ G G + A LFD MPDRDV AW ++++G Q G ++A + F
Sbjct: 138 MPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALF 197
Query: 236 RRMGME--------VSDNIRPNQVTLVCAL-------SAIGHTGML----QLGKVIHGYV 276
M +S + +V L L + + T ML Q G V
Sbjct: 198 DEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAE 257
Query: 277 YRNGLDLDSFIS-NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
N + + NA++ +G+ G + A+ F++ ++ +W++MI ++ + +
Sbjct: 258 LFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEA 317
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ F EM+ +RP+ + IS+L C +++ GR M + + +
Sbjct: 318 LSTFREMLW---RGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRC-SFDMDVFAVSA 373
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVV-WGSLLNGCKIYGRTDFAE--FAVKKLIEID 452
L+ + + G ++A V EP ++V W S++ G +G + A F +L +
Sbjct: 374 LITMYIKCGNLDKAKRVFH--TFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMS 431
Query: 453 PNNGGY-GIMLANIYGELGKWDEVRKV 478
P+ Y G + A Y GK E R++
Sbjct: 432 PDGITYIGALTACSY--TGKVKEGREI 456
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 133/302 (44%), Gaps = 43/302 (14%)
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM------- 238
A I+ R G+I+ A + F++MP R ++N+++AG +N L A+ FRRM
Sbjct: 22 ARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLAS 81
Query: 239 ------GMEVSDNIRPNQVTLVCAL----SAIGHTGMLQLGKVIHGY------VYRNGLD 282
G+ + P+ + ++ S + T +L+ G V HG +++ +
Sbjct: 82 YNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLR-GYVRHGLLADAIRLFQQMPE 140
Query: 283 LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM 342
+ L+ G + EARR FD + + +W +M++ + G+ + +F+EM
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200
Query: 343 MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG- 401
+ N+ V++ ++++ G V R F++M P+ L+G
Sbjct: 201 PK---RNV----VSWTAMISGYAQNGEVNLARKLFEVM-------PERNEVSWTAMLVGY 246
Query: 402 -RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI 460
+AG E+A E+ M P +++ G G D A+ +K+ E D +G +
Sbjct: 247 IQAGHVEDAAELFNAMPEHPVAAC-NAMMVGFGQRGMVDAAKTVFEKMRERD--DGTWSA 303
Query: 461 ML 462
M+
Sbjct: 304 MI 305
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 281/523 (53%), Gaps = 47/523 (8%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARF 67
N+ V++ I + + L + LG N A LV +C S+L AR
Sbjct: 183 NEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVC--SSLGNARV 240
Query: 68 IFDHLTTPNTYLYTAMITAYAS------------------------------QPAHASSA 97
+FD + N + M+ Y+ Q A
Sbjct: 241 LFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEA 300
Query: 98 FSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVN 157
+YR M+R G PN+ + ++ +C + + H IV++GF+ Y ++ +++
Sbjct: 301 LRMYRSMLRTGV-GPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIH 359
Query: 158 SYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNS 217
Y+ G +I +A F+ S +V SW A+ISG+ R G I+ A LFD MP+RDV +W+S
Sbjct: 360 FYAACG-EINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSS 418
Query: 218 VIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVY 277
+I+G +QN A+ F M V+ ++PN++T+V SAI G L G+ H Y+
Sbjct: 419 MISGYSQNEQPDLALQLFHEM---VAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYIL 475
Query: 278 RNGLDLDSFISNALIDMYGKCGSLKEARRAF----DRNSKKRLTSWNSMINSFALHGQSE 333
N + L+ ++ ALIDMY KCGS+ A + F DR S ++ WN++I A+HG +
Sbjct: 476 SNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSS--VSPWNAIICGLAMHGHAN 533
Query: 334 NSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
S+ +F ++ R + I+P+ +TFI +L+AC H GLV+ G YFK M Y IEP I+HY
Sbjct: 534 VSLKLFSQLQRVR---IKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHY 590
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDP 453
GC++DLLGRAGR +EA E+++ M ++ D V+WG+LL C+ +G + E A + L ++D
Sbjct: 591 GCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIGERAAENLAKLDI 650
Query: 454 NNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWI 496
++G ++L+NIY + G+WD+ VR+ ++ + K+PGCS +
Sbjct: 651 SHGAGRVLLSNIYADAGRWDDAFLVRRAMQSQRMKKSPGCSGV 693
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 221/494 (44%), Gaps = 78/494 (15%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K +L AR +F+ + YT M+ A Q A +++DM R PN+
Sbjct: 129 VKSGSLDNARHLFEKMPIKGCVSYTTMVMGLA-QNNCWLEAIGVFKDM-RFAGVIPNEVT 186
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
V+ + V +M+H K G E +V T LV+ Y + +G AR LFDE+
Sbjct: 187 LASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVC-SSLGNARVLFDEI 245
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+RNVV+W M++GY++ G + A LF+ +P +DV +W ++I G Q +A+ +R
Sbjct: 246 PERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYR 305
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M + + PN+V +V +SA G T + G+ HG + R G D FI +I Y
Sbjct: 306 SM---LRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYA 362
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR------------ 344
CG + A F+ SK ++SWN++I+ F +G E + +F+EM
Sbjct: 363 ACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISG 422
Query: 345 -CQDHN---------------IRPDGVTFISLLNACTHGGLVEQGR-AYFKLMTKTYRIE 387
Q+ ++P+ +T +S+ +A G + +GR A+ +++ + +
Sbjct: 423 YSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLN 482
Query: 388 PQIEHYGCLVDLLGRAGRFEEALEV----------------------------------- 412
+ L+D+ + G AL++
Sbjct: 483 DNLN--AALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFS 540
Query: 413 -VKGMKIEPDEVVWGSLLNGCKIYGRTDFAE---FAVKKLIEIDPNNGGYGIMLANIYGE 468
++ ++I+P+ + + +L+ C G D E +K L I+PN YG M+ ++ G
Sbjct: 541 QLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMI-DLLGR 599
Query: 469 LGKWDEVRK-VRKM 481
G+ E + +RKM
Sbjct: 600 AGRLKEAAEMIRKM 613
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 157/346 (45%), Gaps = 36/346 (10%)
Query: 66 RFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
+FIF L PN +A A + P H + + + Q + LKSC
Sbjct: 8 KFIFGSLI-PNLKWVSA---APSQLPPHPIDHLRAFFNGNKDTQHSDYELTLVSALKSCS 63
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
+L + +H+ + KSG V+ +L++ Y + I AR LFD S + VS
Sbjct: 64 SLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKC-RLISNARSLFDTCSVLDPVSCN 122
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
M++GY + G + NA LF+ MP + ++ +++ G QN + +AI F+ M
Sbjct: 123 IMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFA---G 179
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
+ PN+VTL +SA H G + +++H ++ GL+ + ++ L+ MY C SL AR
Sbjct: 180 VIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNAR 239
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFE------------------------E 341
FD ++ + +WN M+N ++ G + + +FE E
Sbjct: 240 VLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGE 299
Query: 342 MMRCQDHNIR----PDGVTFISLLNACTHGGLVEQGRAYFKLMTKT 383
+R +R P+ V + L++AC V +G+ + ++ +T
Sbjct: 300 ALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRT 345
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/504 (35%), Positives = 282/504 (55%), Gaps = 34/504 (6%)
Query: 32 LQSFL-TTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL----TTPNTYLYTAMITA 86
L FL L Q T Y+F L++ L + LT R H+ + +T++ A+I A
Sbjct: 117 LAVFLDVPLRQRGTFTYSF-LIK--ALAAAGLTPVRGAHAHVVKLGSAEDTFVGNALIDA 173
Query: 87 YASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFE 146
Y S+ S A ++ +M R N + V + D +S F+
Sbjct: 174 Y-SKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDA-------------ARSMFD 219
Query: 147 QYPVVETA----LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAAS 202
+ P +T +++ Y+++G + A +LF M RNVVSW+ ++S Y + GD++ A
Sbjct: 220 EMPEKDTVSWNTMLDGYAKAG-EAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARV 278
Query: 203 LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGH 262
+FD MP +++ W +++ C Q GL +A F M + I + + +V L+A
Sbjct: 279 IFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEM---MDAAIELDVIAVVSILAACAE 335
Query: 263 TGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN-SKKRLTSWNS 321
+G L LGK IH +V + L + + NAL+DM+ KCG + A FD +K L SWN
Sbjct: 336 SGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNI 395
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
+I FA+HG E ++ +F +M + PD VT I++L+ACTH GLVE+GR +F M
Sbjct: 396 IIGGFAMHGPGEKALELFAQM---KQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANME 452
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
Y I+PQIEHYGC+VDLLGR G +EA++++K M EP+EV+WGSLL+ C+++ ++A
Sbjct: 453 TDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYA 512
Query: 442 EFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQ 501
E AV +L + P++ G +L+NIY E GKW ++ K R +K + KT G SWIE+++
Sbjct: 513 ELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNEA 572
Query: 502 VHQFHSLDKTHPRTEEIYDALESM 525
H+F D+ HP +++I D ++ +
Sbjct: 573 FHEFTVGDRKHPESDQISDMIDRL 596
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/504 (35%), Positives = 282/504 (55%), Gaps = 34/504 (6%)
Query: 32 LQSFL-TTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL----TTPNTYLYTAMITA 86
L FL L Q T Y+F L++ L + LT R H+ + +T++ A+I A
Sbjct: 189 LAVFLDVPLRQRGTFTYSF-LIK--ALAAAGLTPVRGAHAHVVKLGSAEDTFVGNALIDA 245
Query: 87 YASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFE 146
Y S+ S A ++ +M R N + V + D +S F+
Sbjct: 246 Y-SKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDA-------------ARSMFD 291
Query: 147 QYPVVETA----LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAAS 202
+ P +T +++ Y+++G + A +LF M RNVVSW+ ++S Y + GD++ A
Sbjct: 292 EMPEKDTVSWNTMLDGYAKAG-EAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARV 350
Query: 203 LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGH 262
+FD MP +++ W +++ C Q GL +A F M + I + + +V L+A
Sbjct: 351 IFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEM---MDAAIELDVIAVVSILAACAE 407
Query: 263 TGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN-SKKRLTSWNS 321
+G L LGK IH +V + L + + NAL+DM+ KCG + A FD +K L SWN
Sbjct: 408 SGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNI 467
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
+I FA+HG E ++ +F +M + PD VT I++L+ACTH GLVE+GR +F M
Sbjct: 468 IIGGFAMHGPGEKALELFAQM---KQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANME 524
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
Y I+PQIEHYGC+VDLLGR G +EA++++K M EP+EV+WGSLL+ C+++ ++A
Sbjct: 525 TDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYA 584
Query: 442 EFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQ 501
E AV +L + P++ G +L+NIY E GKW ++ K R +K + KT G SWIE+++
Sbjct: 585 ELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNEA 644
Query: 502 VHQFHSLDKTHPRTEEIYDALESM 525
H+F D+ HP +++I D ++ +
Sbjct: 645 FHEFTVGDRKHPESDQISDMIDRL 668
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 194/623 (31%), Positives = 304/623 (48%), Gaps = 118/623 (18%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFD 70
N L++L C + L+ + + + G TN+ KL+ C + L YA +F+
Sbjct: 33 NHPSLSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFE 92
Query: 71 HLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQF------------- 115
+ PN ++ M +A S P SA LY M+ G PN +
Sbjct: 93 TIQEPNLLIWNTMFRGHALSSDPV---SALKLYVCMISLGL-LPNSYTFPFLLKSCAKSK 148
Query: 116 -------IYPHVLKSCPDVLESRGTKMV--------------------------HTQIVK 142
I+ HVLK D+ T ++ +T ++K
Sbjct: 149 AFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIK 208
Query: 143 SG------------FEQYPVVET----ALVNSYSRSGNDIGIARKLFDEMSD-------- 178
F++ PV + A+++ Y+ +GN A +LF EM
Sbjct: 209 GYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGN-YKEALELFKEMMKTNIRPDES 267
Query: 179 ------------------RNVVSW-------------TAMISGYTRVGDIKNAASLFDSM 207
R V SW +++ Y++ G+++ A LF+ +
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGL 327
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
+DV +WN++I G T L+ +A+ F+ M + RPN VT++ L A H G +
Sbjct: 328 LYKDVISWNTLIGGYTHMNLYKEALLLFQEM---LRSGERPNDVTMLSILPACAHLGAID 384
Query: 268 LGKVIHGYVYR--NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
+G+ IH Y+ + S + +LIDMY KCG ++ A + F+ K L+SWN+MI
Sbjct: 385 IGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
FA+HG+++ + +F M + I PD +TF+ LL+AC+ G+++ GR F+ MT+ Y+
Sbjct: 445 FAMHGRADAAFDIFSRMRKI---GIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYK 501
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
I P++EHYGC++DLLG +G F+EA E++ M++EPD V+W SLL CKI G + E
Sbjct: 502 ITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFA 561
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
+ LI+I+P N G ++L+NIY G+W+EV K+R +L D+ K PGCS IE+D VH+F
Sbjct: 562 QNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEF 621
Query: 506 HSLDKTHPRTEEIYDALESMVAL 528
DK HPR EIY LE M L
Sbjct: 622 IIGDKFHPRNREIYGMLEEMEVL 644
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 280/501 (55%), Gaps = 41/501 (8%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL--KLSNLTYARFIFDHLT 73
+L+ ER + ++Q +F+ G F A KLV F + ++YA I + +
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
+PN + + ++I AYA+ + A +++R+M+ G P+++ + VLK+C
Sbjct: 102 SPNGFTHNSVIRAYANS-STPEVALTVFREMLL-GPVFPDKYSFTFVLKACAAFCGFEEG 159
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSG------------------------------ 163
+ +H +KSG VE LVN Y RSG
Sbjct: 160 RQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEK 219
Query: 164 NDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCT 223
+ AR LFDEM +RNV SW MISGY G +K A +FDSMP RDV +WN+++
Sbjct: 220 GLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYA 279
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL 283
G +++ + F +M + ++ +P+ TLV LSA G L G+ +H Y+ ++G+++
Sbjct: 280 HVGCYNEVLEVFNKMLDDSTE--KPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEI 337
Query: 284 DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
+ F++ AL+DMY KCG + +A F SK+ +++WNS+I+ ++HG ++++ +F EM+
Sbjct: 338 EGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMV 397
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
+P+G+TFI +L+AC H G+++Q R F++M+ YR+EP IEHYGC+VDLLGR
Sbjct: 398 Y---EGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRM 454
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID-PNNGGYGIML 462
G+ EEA E+V + + ++ SLL CK +G+ + AE +L+E++ ++ GY M
Sbjct: 455 GKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQM- 513
Query: 463 ANIYGELGKWDEVRKVRKMLK 483
+N+Y G+W++V R+ ++
Sbjct: 514 SNLYASDGRWEKVIDGRRNMR 534
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 162/468 (34%), Positives = 258/468 (55%), Gaps = 63/468 (13%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
YP V+K+C + + +VHT +VKSGFE + +L++ Y+ +G D+G A++LF
Sbjct: 3 YPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYA-NGKDLGAAKQLFSLC 61
Query: 177 SDRNVVSWTAMISGYTR-------------------------------VGDIKNAASLFD 205
SDR+VVSW AMI GY + VG I A LFD
Sbjct: 62 SDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLFD 121
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM-----------------------GMEV 242
MP+R++ +WNS+++G + G +A F M + +
Sbjct: 122 EMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALAL 181
Query: 243 SDNIR-----PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
D +R P + T+V LSA H G L G +H Y+ N ++++S + AL+DMY K
Sbjct: 182 FDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAK 241
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG + A + F+ K + +WN++I A+HG + + +F+EM ++ ++ P+ +TF
Sbjct: 242 CGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEM---KEASVEPNDITF 298
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+++L+AC+H G+V++G+ M+ +Y IEP++EHY C++DLL RAG EEA+E++ M
Sbjct: 299 VAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMP 358
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+EP+ G+LL GC+I+G + E K+LI + P + G I+L+NIY KWD+ RK
Sbjct: 359 MEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARK 418
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
VR ++K K PG S IE+ VH+F + D +HP + +IYD L +
Sbjct: 419 VRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYDKLNEI 466
>gi|357496515|ref|XP_003618546.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493561|gb|AES74764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 637
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 176/486 (36%), Positives = 268/486 (55%), Gaps = 37/486 (7%)
Query: 72 LTTPNTYLYTAMITAYAS--QPAHASSAFSL----------YRDMVRRGQP--------Q 111
+++PN +L A++ Y S P+HA F Y ++R P Q
Sbjct: 52 ISSPNHFLRNALLHLYGSCSLPSHARKLFDEIPQSHKDSVDYTALIRHCPPFESLKLFIQ 111
Query: 112 PNQFIYP-------HVLKSCPDVL--ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRS 162
QF P L +C + +++ +H +VK GF ++ V AL+N Y +
Sbjct: 112 MRQFDLPLDGVVMVCALNACARLGGGDTKVGSQMHVGVVKFGFVKFDKVCNALMNVYVKF 171
Query: 163 GNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC 222
G +G ARK+F+ + R+VVSW+ + G + +++ LFD MP+R+ AW +I G
Sbjct: 172 GL-VGEARKMFEGIEVRSVVSWSCFLEGLVKWESVESGRVLFDEMPERNEVAWTVMIVGY 230
Query: 223 TQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN-GL 281
NG +A + M R + VTL LSA +G + +G+ +H Y + GL
Sbjct: 231 VGNGFTKEAFLLLKEMVFGC--GFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAVKEMGL 288
Query: 282 DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEE 341
D + +L+DMY KCG + A F K+ + +WN+M+ A+HG + ++ +F
Sbjct: 289 DFGVMVGTSLVDMYAKCGRINAALSVFRSMLKRNVVAWNAMLGGLAMHGMGKIAVDMFPS 348
Query: 342 MMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG 401
M+ ++PDGVTF++LL+AC+H GLVE+G YF + YRI+P+IEHY C+V LLG
Sbjct: 349 MVE----EVKPDGVTFMALLSACSHSGLVEKGWDYFHDLEPVYRIKPEIEHYACMVGLLG 404
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIM 461
RAGR EEA +VK M+I P+EVV GSL+ C +GR E ++ L+E+DP N Y I+
Sbjct: 405 RAGRLEEAEIMVKNMRIPPNEVVLGSLIGSCYAHGRLQLGEKIMRDLLEMDPLNTEYHIV 464
Query: 462 LANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDA 521
L+N+Y GK ++ +R++LK R K PG S I VD ++HQF + DK+H RT EIY
Sbjct: 465 LSNMYALSGKVEKANSLRQVLKKRGIKKVPGMSSIYVDGKLHQFIAGDKSHTRTSEIYMK 524
Query: 522 LESMVA 527
L+ M+
Sbjct: 525 LDEMIC 530
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 158/418 (37%), Positives = 251/418 (60%), Gaps = 14/418 (3%)
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG-FEQYPVVETALVNSYSRSGNDIGIAR 170
P++ V+ +C + R + VH +VK V+ ALV+ Y++ G AR
Sbjct: 8 PDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWE-AR 66
Query: 171 KLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSD 230
+FD M R+VVS T++++GY + ++++A +F M +++V AWN +IA QNG +
Sbjct: 67 CIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEE 126
Query: 231 AISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL------DLD 284
AI F ++ D+I P T L+A G+ +LQLG+ H +V + G + D
Sbjct: 127 AIRLFVQLK---RDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESD 183
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
F+ N+L+DMY K GS+ + + F+R + + SWN+MI +A +G++++++ +FE M+
Sbjct: 184 VFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERML- 242
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
C + N PD VT I +L+AC H GLV++GR +F MT+ + I P +HY C+VDLLGRAG
Sbjct: 243 CSNEN--PDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAG 300
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLAN 464
+EA E++K M EPD V+W SLL C+++ + E +L E+DP N G ++L+N
Sbjct: 301 HLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSN 360
Query: 465 IYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+Y E+GKW +V +VR+ +KDR K PGCSWIE+ +++ F + D HP EI+ L
Sbjct: 361 MYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTL 418
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/457 (34%), Positives = 257/457 (56%), Gaps = 42/457 (9%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD ++ + + AMI+ Y + + A LY+DM++ +P++ V+ +C
Sbjct: 150 ARKLFDEISVKDVVSWNAMISGYV-ETCNFKEALELYKDMMKT-NVKPDESTMVTVVSAC 207
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ +H+ I GF G++I I L D
Sbjct: 208 AQSGSIELGRQLHSWIEDHGF-----------------GSNIKIVNVLIDL--------- 241
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
Y++ G+++ A LF + +DV +WN++I G T L+ +A+ F+ M +
Sbjct: 242 ------YSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEM---LRS 292
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR--NGLDLDSFISNALIDMYGKCGSLK 302
PN VT++ L A H G + +G+ IH Y+ + G+ S + +LIDMY KCG ++
Sbjct: 293 GESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIE 352
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
A++ FD + L+SWN+MI FA+HG++ + +F +M + + I PD +TF+ LL+
Sbjct: 353 AAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRK---NGIDPDDITFVGLLS 409
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H G+++ GR F+ M++ Y+I P++EHYGC++DLLG G F+EA E+++ M +EPD
Sbjct: 410 ACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDG 469
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
V+W SLL CK++ + E + LI+I+P N G ++L+NIY G+WD+V K+R +L
Sbjct: 470 VIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLL 529
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
D+ K PGCS IE+D VH+F DK HPR EIY
Sbjct: 530 NDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIY 566
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 219/411 (53%), Gaps = 15/411 (3%)
Query: 50 KLVRFCTLK--LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRR 107
+L+ F L L+YA IF+ + PN ++ M +A + + +A LY M+
Sbjct: 1 QLIEFSVLSPHFDGLSYAISIFETIQEPNLLIWNTMFRGHALN-SDSVTALKLYVCMISL 59
Query: 108 GQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIG 167
G PN + +P +LKSC + +H ++K G++ V T+L++ Y+++G +
Sbjct: 60 GL-LPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGR-LE 117
Query: 168 IARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGL 227
A K+FD S R+VVS+TA+I+GY G I NA LFD + +DV +WN++I+G +
Sbjct: 118 DAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCN 177
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
F +A+ ++ M + N++P++ T+V +SA +G ++LG+ +H ++ +G + I
Sbjct: 178 FKEALELYKDM---MKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKI 234
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
N LID+Y KCG ++ A F +KK + SWN++I + ++ +F+EM+R +
Sbjct: 235 VNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGE 294
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR-IEPQIEHYGCLVDLLGRAGRF 406
P+ VT +S+L AC H G ++ GR + K + + L+D+ + G
Sbjct: 295 ---SPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDI 351
Query: 407 EEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD--FAEFAVKKLIEIDPNN 455
E A +V M + W +++ G ++G+ + F F+ + IDP++
Sbjct: 352 EAAKQVFDSM-LTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDD 401
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/530 (33%), Positives = 271/530 (51%), Gaps = 73/530 (13%)
Query: 3 SVTNQ--LNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQ-----TNFYAFKLVRFC 55
S++N +NQ L+Q ++ + +H+N +K + +++ G + T FY F C
Sbjct: 52 SISNHAHMNQMLSQMIMNYIP-IDHLNLMKLIDFSVSSHGFAASALLFTQFYGFIDSDLC 110
Query: 56 TLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQF 115
+MI Y H S F +Y M + G P+
Sbjct: 111 N-------------------------SMIRCYTDSNKHLHSVF-IYTQMWKNG-IFPDSS 143
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
+P VLKS + K +H I++ GFE V TALVN Y +
Sbjct: 144 TFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYGTCSS----------- 192
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
+ +A +FD +PDR++ +WN++I G N +F I F
Sbjct: 193 ---------------------VSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVF 231
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
R M + +P +VT+V L A H G L G+ I Y+ N L L+ F+ ALIDMY
Sbjct: 232 REMQIA---GAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMY 288
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCG + EA + F K + +WN +I+ +A++G+ E+++ F M+ +PD V
Sbjct: 289 AKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIM---EKFKPDEV 345
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF+ +L AC H GLV +GR YF M + + + P+IEHYGC+VDLLGRAG +EA ++++
Sbjct: 346 TFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQA 405
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M ++PD ++W LL C+I+G EFA+KKL+E++PNNG ++LAN+Y +WD+V
Sbjct: 406 MSMQPDPIIWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKV 465
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+VR+M+ R K PGCS IE+D V++F + P EE+Y L M
Sbjct: 466 GEVREMMDCRRVRKVPGCSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADM 515
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/459 (36%), Positives = 278/459 (60%), Gaps = 9/459 (1%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L +AR +FD + + +T MI YA + A +L+ M+ +PN+ +L
Sbjct: 203 LGFARQMFDESSVKDVVTWTTMINGYA-RNNWLDEAIALFNSMLS-SDVKPNEVTMIALL 260
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+C +S K +H I + + A+++ Y + G + AR++F+ M R+V
Sbjct: 261 SACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGC-LTTAREIFNNMERRDV 319
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
SWT++++GY + GD+ +A LFD MP+R++ +WN++IAG +QN +A+ F M
Sbjct: 320 FSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDV 379
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH-GYVYRNGLDLDSFISNALIDMYGKCGS 300
V + P + TLVC LSA G G L++G+ IH +V + G+ + + NA++DMY KCGS
Sbjct: 380 VG--LVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGS 437
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+ A + F +K L SWNSMI+++A +G ++ ++ +F++M+ ++PD +TFI +
Sbjct: 438 IDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMI---GSGLKPDHITFIGV 494
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC++GG V +G+A+F+ M + +EP+ EHY C+VDLL R G +EA E++ M +E
Sbjct: 495 LSACSYGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRMPMEA 554
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
E WG+LL+ C+ +G + A+ A +KL+E+DP + G +LANI + KW +VR VR+
Sbjct: 555 SEGGWGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKKWKDVRMVRR 614
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
M+++R K PG S IE++ + H+F D +H R+ EIY
Sbjct: 615 MMRERGVKKVPGHSLIEIEGKFHEFLVADTSHTRSSEIY 653
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 227/493 (46%), Gaps = 73/493 (14%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARF 67
N ++ L IL+ C+ + LKQ+Q+ +T G F A +L+ FC L S ++ YA
Sbjct: 48 NVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHL 107
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVR-RGQPQPNQFIYPHVLKSCPD 126
IFD PN + + MI Y + H S FS +R M+R R + F++ LK+C
Sbjct: 108 IFDQTELPNCFFWNTMIKGYC-KANHPSMGFSFFRQMIRNRAEFDSGSFVF--ALKACGQ 164
Query: 127 VLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
E VH+ I K GF+ V+ L+ +Y +G +G AR++FDE S ++VV+WT
Sbjct: 165 FAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGC-LGFARQMFDESSVKDVVTWTT 223
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
MI+GY R + A +LF+SM +S ++
Sbjct: 224 MINGYARNNWLDEAIALFNSM----------------------------------LSSDV 249
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
+PN+VT++ LSA G ++GK +H ++ R + + NA++DMY KCG L AR
Sbjct: 250 KPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTARE 309
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM---------------------MRC 345
F+ ++ + SW S++N +A +G ++ +F+EM M
Sbjct: 310 IFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEA 369
Query: 346 QD--HN------IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLV 397
+ HN + P T + +L+A G +E G+ I+ + ++
Sbjct: 370 LELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVM 429
Query: 398 DLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI--EIDPNN 455
D+ + G + A ++ M E + V W S+++ YG A ++I + P++
Sbjct: 430 DMYAKCGSIDAAAKLFHSMP-EKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDH 488
Query: 456 GGY-GIMLANIYG 467
+ G++ A YG
Sbjct: 489 ITFIGVLSACSYG 501
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 259/461 (56%), Gaps = 11/461 (2%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F+++ + + +I Y +Q A + M+ +P+ F VL +C ++
Sbjct: 435 MFENMVERSIVSWNTIIAGY-NQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANL 493
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE--MSDRNVVSWT 185
+ K +H+ I+++G + AL+++Y++SG+ + AR++ D+ ++D NV+S+T
Sbjct: 494 RMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGS-VETARRIMDQAVVADLNVISFT 552
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
A++ GY ++GD K A +FD M +RDV AW ++I G QNG +A+ FR M +
Sbjct: 553 ALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSM---ILIG 609
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
PN TL LSA L GK IH R+ + +SNA+I +Y + GS+ AR
Sbjct: 610 PEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLAR 669
Query: 306 RAFDRNS-KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R FD+ +K +W SMI + A HG E ++ +FEEM+R ++PD +T++ +L+AC
Sbjct: 670 RVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRV---GVKPDHITYVGVLSAC 726
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
H G V++G+ Y++ M + I PQ+ HY C+VDL RAG EA E ++ M + PD VV
Sbjct: 727 AHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVV 786
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WGSLL C++ D AE A KL+ IDP+N G LAN+Y G+W++ ++ K+ KD
Sbjct: 787 WGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKD 846
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ K G SW V +VH F + D HP+ + IY M
Sbjct: 847 KGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRKAAEM 887
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 194/427 (45%), Gaps = 42/427 (9%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L A +F + + +T MI ++ A + DMV G P+QF
Sbjct: 293 KSGRLPDAHVVFAEMPDRDAVSWTIMIVGL-NRSGRFWDAVKTFLDMVSEGF-APSQFTL 350
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+VL SC + + VH +VK G V +++ Y + G D AR +F+ M
Sbjct: 351 TNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCG-DAETARAVFERMQ 409
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
R+V SW M+S YT G ++ A S+F++M +R + +WN++IAG QNGL A+ FF R
Sbjct: 410 VRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSR 469
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M + ++ P+ T+ LSA + ML++GK +H Y+ R G+ S I NALI Y K
Sbjct: 470 --MLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAK 527
Query: 298 CGSL---------------------------------KEARRAFDRNSKKRLTSWNSMIN 324
GS+ K+AR FD + + + +W +MI
Sbjct: 528 SGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIV 587
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
+ +GQ++ ++ +F M+ P+ T ++L+AC ++ G+ ++
Sbjct: 588 GYHQNGQNDEAMELFRSMILI---GPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSL 644
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
+ E + ++ + R+G A V + + + W S++ +G + A
Sbjct: 645 Q-EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVL 703
Query: 445 VKKLIEI 451
++++ +
Sbjct: 704 FEEMVRV 710
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 141/281 (50%), Gaps = 23/281 (8%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGI-------A 169
Y +L+ C + + +H VK+G +V T L N+ +G+ A
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGL----LVSTYLCNNLLAYYASVGVSRGCFREA 267
Query: 170 RKLFDEM--SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGL 227
R LFD++ + RN +W +++S Y + G + +A +F MPDRD +W +I G ++G
Sbjct: 268 RCLFDDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGR 327
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
F DA+ F M VS+ P+Q TL LS+ +G+ +H +V + GL +
Sbjct: 328 FWDAVKTFLDM---VSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPV 384
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
+N+++ MYGKCG + AR F+R + ++SWN M++ + G+ E ++ +FE M+ +
Sbjct: 385 ANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMV---E 441
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
+I V++ +++ GL +F M +EP
Sbjct: 442 RSI----VSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEP 478
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 39/268 (14%)
Query: 45 NFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM 104
N +F + +KL + AR IFD + + +TAMI Y Q A L+R M
Sbjct: 547 NVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGY-HQNGQNDEAMELFRSM 605
Query: 105 VRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN 164
+ G P+PN VL +C + K +H + ++S EQ V A++ Y+RSG+
Sbjct: 606 ILIG-PEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGS 664
Query: 165 DIGIARKLFDEMSDRN-VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCT 223
+ +AR++FD++ R ++WT+M I
Sbjct: 665 -VPLARRVFDQICWRKETITWTSM-------------------------------IVAMA 692
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVY-RNGLD 282
Q+GL A+ F M V ++P+ +T V LSA H G + GK + + +G+
Sbjct: 693 QHGLGEQAVVLFEEM---VRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIV 749
Query: 283 LDSFISNALIDMYGKCGSLKEARRAFDR 310
++D++ + G L EA R
Sbjct: 750 PQMSHYACMVDLHARAGLLTEAHEFIQR 777
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 173/461 (37%), Positives = 267/461 (57%), Gaps = 9/461 (1%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD +T + +MI YA + AF L+R M G +P+ F + ++L C
Sbjct: 142 ARKLFDDITDKTLVSWNSMIGGYAHM-GNWKEAFLLFRKMREWGM-EPDGFTFVNLLSVC 199
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ + VH I +G + +V ALV+ Y++ GN + A+ +FD ++NVVSW
Sbjct: 200 SQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGN-LHSAQAIFDRTQEKNVVSW 258
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T+MIS Y + G I+ A +FD MP ++V +WNS+I+ + G + +A+ F +M +
Sbjct: 259 TSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMR---NS 315
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ P++ TLV L+A G L +GK IH Y+ N + N+LIDMY KCG + A
Sbjct: 316 RVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTA 375
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F K L SWN +I + ALHG +I +FEEM Q PD +T LL+AC
Sbjct: 376 LDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEM---QADGTLPDEITLTGLLSAC 432
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLV+ G YF M YR+ +IEHY C+VDLLGR G EA+E++ M ++PD VV
Sbjct: 433 SHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVV 492
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL C+I+G + + +K+L+E++P++GG ++++NIY E +W++V+K+RK++ D
Sbjct: 493 WGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMID 552
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
R K S IE+D +++F DK H + IY L+ +
Sbjct: 553 RGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQL 593
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 195/451 (43%), Gaps = 77/451 (17%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTPNTYLYTAMITAY 87
LK L + + G + KL+ FC + +L YA+ +FD + PN ++Y ++I Y
Sbjct: 4 LKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGY 63
Query: 88 ASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQ 147
S A L+R M+ G PN+F P VLK+C +VH +K G
Sbjct: 64 -SNSDDPIDAVLLFRRMICSGL-SPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGS 121
Query: 148 YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM 207
V+ AL I+ Y G I A LFD +
Sbjct: 122 LVFVQNAL--------------------------------IAVYVVCGLIHCARKLFDDI 149
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRM---GMEVSDNIRPNQVTLVCALSAIGHTG 264
D+ + +WNS+I G G + +A FR+M GME P+ T V LS +
Sbjct: 150 TDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGME------PDGFTFVNLLSVCSQSR 203
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
L LG+ +H + G+ +D + NAL+DMY KCG+L A+ FDR +K + SW SMI+
Sbjct: 204 DLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMIS 263
Query: 325 SFALHGQSENSICVFEE-----------MMRC-----------------QDHNIRPDGVT 356
++A HG E + +F++ M+ C ++ + PD T
Sbjct: 264 AYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEAT 323
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV---V 413
+S+L AC+ G + G+ + + + Y L+D+ + G AL++ +
Sbjct: 324 LVSILAACSQLGDLVMGKKIHNYILSN-KGAYGVTLYNSLIDMYAKCGPVVTALDIFLEM 382
Query: 414 KGMKIEPDEVVWGSL-LNGCKIYGRTDFAEF 443
G + V+ G+L L+GC + F E
Sbjct: 383 PGKNLVSWNVIIGALALHGCGLEAIKLFEEM 413
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/473 (34%), Positives = 256/473 (54%), Gaps = 25/473 (5%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
++ L AR++FD + + + MI+ YA Q S A L+ + R +
Sbjct: 215 VRKKKLGDARWLFDKMPVRDAISWNTMISGYA-QGGGLSQARRLFDESPTRDVFTWTAMV 273
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKL 172
+V D K+ F++ P V A++ Y ++ + IAR+L
Sbjct: 274 SGYVQNGMLDE-------------AKTFFDEMPEKNEVSYNAMIAGYVQT-KKMDIAREL 319
Query: 173 FDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAI 232
F+ M RN+ SW MI+GY ++GDI A FD MP RD +W ++IAG Q+G + +A+
Sbjct: 320 FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEAL 379
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALI 292
+ F + D N+ T CALS L+LGK IHG + G F+ NAL+
Sbjct: 380 NMFVEIK---QDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALL 436
Query: 293 DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
MY KCGS+ EA F+ +K + SWN+M+ +A HG ++ VFE M + ++P
Sbjct: 437 AMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESM---KTAGVKP 493
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
D +T + +L+AC+H GL+++G YF MTK Y + P +HY C++DLLGRAGR EEA ++
Sbjct: 494 DEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDL 553
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKW 472
++ M +P WG+LL +I+G T+ E A + + +++P N G ++L+N+Y G+W
Sbjct: 554 IRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRW 613
Query: 473 DEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ K+R ++D K PG SW+EV ++H F D +HP E IY LE +
Sbjct: 614 VDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEEL 666
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 173/405 (42%), Gaps = 55/405 (13%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + + ++++ YA Q + A ++ +M + N + +V
Sbjct: 130 ARRLFDLMPEKDVVSWNSLLSGYA-QNGYVDEAREVFDNMPEKNSISWNGLLAAYV---- 184
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
G + +S + + L+ + R +G AR LFD+M R+ +SW
Sbjct: 185 -----HNGRIEEACLLFESKSDWDLISWNCLMGGFVRK-KKLGDARWLFDKMPVRDAISW 238
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
MISGY + G + A LFD P RDV W ++++G QNG+ +A +FF M
Sbjct: 239 NTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----- 293
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGK-VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
N+V+ ++ T + + + + RN + S+ N +I YG+ G + +
Sbjct: 294 --EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRN---ISSW--NTMITGYGQIGDIAQ 346
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG-----VTFI 358
AR+ FD ++ SW ++I +A G E ++ +F E I+ DG TF
Sbjct: 347 ARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVE--------IKQDGESLNRATFG 398
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG-------CLVDLLGRAGRFEEALE 411
L+ C +E G+ K YG L+ + + G +EA +
Sbjct: 399 CALSTCADIAALELGKQIHGQAVKM--------GYGTGCFVGNALLAMYFKCGSIDEAND 450
Query: 412 VVKGMKIEPDEVVWGSLLNGCKI--YGRTDFAEFAVKKLIEIDPN 454
+G++ E D V W ++L G +GR F K + P+
Sbjct: 451 TFEGIE-EKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPD 494
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 170/397 (42%), Gaps = 78/397 (19%)
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
V A+++ Y R+ + +AR LFD+M +R++ SW M++GY R + +A LFD MP+
Sbjct: 81 VSYNAMISGYLRN-SKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPE 139
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI-RPNQVTLVCALSAIGHTG---- 264
+DV +WNS+++G QNG +A EV DN+ N ++ L+A H G
Sbjct: 140 KDVVSWNSLLSGYAQNGYVDEA--------REVFDNMPEKNSISWNGLLAAYVHNGRIEE 191
Query: 265 ------------MLQLGKVIHGYVYRNGLD-----------LDSFISNALIDMYGKCGSL 301
++ ++ G+V + L D+ N +I Y + G L
Sbjct: 192 ACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGL 251
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD--HNIRPDGVT--- 356
+ARR FD + + + +W +M++ + +G + + F+EM + +N G
Sbjct: 252 SQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTK 311
Query: 357 ---------------FISLLNACTHG----GLVEQGRAYFKLMTKTYRIEPQIE--HYGC 395
IS N G G + Q R +F +M PQ + +
Sbjct: 312 KMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMM-------PQRDCVSWAA 364
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNN 455
++ ++G +EEAL + +K + + + + GC + D A + K I
Sbjct: 365 IIAGYAQSGHYEEALNMFVEIKQDGESLNRATF--GCALSTCADIAALELGKQIHGQAVK 422
Query: 456 GGYGI------MLANIYGELGKWDEVRKVRKMLKDRN 486
GYG L +Y + G DE + +++++
Sbjct: 423 MGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKD 459
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 38/138 (27%)
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GL++ G YF M + Y + P +HY C++DLLGR R EE G+
Sbjct: 778 GLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE-----------------GA 820
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LL +I+G T+ E A + ++ P N G + KM +D
Sbjct: 821 LLGASRIHGNTELGEKAAQMFFKMGPQNSG--------------------ISKM-RDVGV 859
Query: 488 YKTPGCSWIEVDKQVHQF 505
K PG SW EV ++H F
Sbjct: 860 QKVPGYSWFEVQNKIHTF 877
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 141/337 (41%), Gaps = 48/337 (14%)
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
+ D +++ W IS + R G +A +F++MP R ++N++I+G +N F+ A + F
Sbjct: 44 VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF 103
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
+M P + + G+ +LG + D+ S+ N+L+ Y
Sbjct: 104 DQM---------PERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSW--NSLLSGY 152
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEE-------------- 341
+ G + EAR FD +K SWN ++ ++ +G+ E + +FE
Sbjct: 153 AQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMG 212
Query: 342 -MMRCQ---------DHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE 391
+R + D D +++ ++++ GG + Q R F +
Sbjct: 213 GFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTR-----DVF 267
Query: 392 HYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
+ +V + G +EA M E +EV + +++ G + D A ++L E
Sbjct: 268 TWTAMVSGYVQNGMLDEAKTFFDEMP-EKNEVSYNAMIAGYVQTKKMDIA----RELFES 322
Query: 452 DP--NNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
P N + M+ YG++G + RK M+ R+
Sbjct: 323 MPCRNISSWNTMITG-YGQIGDIAQARKFFDMMPQRD 358
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/579 (31%), Positives = 298/579 (51%), Gaps = 70/579 (12%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
L +L++L+ + + Q+ + L T F A +L+ K N+ YA +F
Sbjct: 10 LKNPLLSLLQXSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQ 69
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ PN+++ M+ Y ++ + A Y +M ++G N + YP VLK+C +
Sbjct: 70 IHQPNSFICNTMVKCY-TESSTPERALRFYAEMRKKGLLGDN-YTYPFVLKACGAMCGLL 127
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN--------------------------- 164
+V + VK GF V L++ Y R G
Sbjct: 128 EGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYV 187
Query: 165 ---DIGIARKLFDEMSDRNVVSWTAMISGY-TRVGDIKNAASLFDSMPDRDVPAWNSVIA 220
++ A+ +FDEM +R+VVSW+ MI GY ++G++ A FDSMP RD+ +WNS+I
Sbjct: 188 WCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMID 247
Query: 221 GCTQNG-------LFS------------------------DAISFFRRMGMEVSDNIRPN 249
G + G +F +A++ FR+M + I+P+
Sbjct: 248 GYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQM---LCQGIKPD 304
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+V++V A+SA G L G+ IH Y+ RN + LD + AL+DMY KCGS EAR F+
Sbjct: 305 RVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFN 364
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
++ + SWN MI ++G + ++ F +M + I D + F+ +L AC+H L
Sbjct: 365 SMPERNVVSWNVMIVGLGMNGFGKEALECFXQM---EMERIPMDDLLFLGVLMACSHANL 421
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
V +G F M YR+EP++EHYGCLVDLLGRAG+ ++ +++ M ++P+ +WGSLL
Sbjct: 422 VTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLL 481
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
C+I+ AE V++L E+ ++ G ++++NIY ++G W+ + ++RK++K+R K
Sbjct: 482 LACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKK 541
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
G S IEVD V +F S +K+H EEI + S+ +
Sbjct: 542 DIGRSVIEVDGNVEEFVSGEKSHILREEIELVIWSLAKM 580
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 178/526 (33%), Positives = 283/526 (53%), Gaps = 69/526 (13%)
Query: 59 LSNLTYARFIFDHLT-TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
L+ + +AR +FDH + +L +MI AY ++ S F+LYRD+ R P+ F +
Sbjct: 33 LAGIVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSES-FALYRDLRRNTSFTPDSFTF 91
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGF-------------------------------E 146
+ KSC + + +H+ +V GF +
Sbjct: 92 SVLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMID 151
Query: 147 QYPVVETALVNSYSRSGN------------------------------DIGIARKLFDEM 176
+ V TAL+ Y RSG+ D+ ARKLFDEM
Sbjct: 152 RSQVSWTALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDMCSARKLFDEM 211
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+R+VVSWT MI GY+ G++ +A SLFD+MP++++ +WN++I+G QN +A+ F
Sbjct: 212 PERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYRQNKQPYEALKLFH 271
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M + + ++ P++VT+V L AI G L LG +H +V R LD + + ALIDMY
Sbjct: 272 EM--QSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYA 329
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG + ++R FD +K SWN++IN+FA++G+++ ++ +F EM P+ +T
Sbjct: 330 KCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEALGLFMEM---NHKGFMPNEIT 386
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
I +L+AC H GLVE+G+ +FK M + + + P+IEHYGC+VDLLGRAG +EA ++++ M
Sbjct: 387 MIGVLSACNHSGLVEEGKRWFKAMEE-FGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESM 445
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
E + ++ S L C AE +K+ I+++ N G IML N+Y +W E
Sbjct: 446 PYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRWKEAD 505
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+V+ +++ K GCS IEVD +V +F + D+ HP+ E I+ L
Sbjct: 506 EVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPKWEAIHSVL 551
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 124/263 (47%), Gaps = 13/263 (4%)
Query: 48 AFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRR 107
AF + +KL ++ AR +FD + + +T MI Y+S + SA SL+ M
Sbjct: 187 AFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSN-GNLDSARSLFDAM--- 242
Query: 108 GQPQPNQFIYPHVLKSCPDVLES-RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN-D 165
P+ N F + ++ + K+ H + E V +++ + + G D
Sbjct: 243 --PEKNLFSWNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALD 300
Query: 166 IG--IARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCT 223
+G + R + + DR TA+I Y + G+I + +FD+MP+++ +WN++I
Sbjct: 301 LGGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFA 360
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL 283
NG +A+ F M + PN++T++ LSA H+G+++ GK + GL
Sbjct: 361 INGRAKEALGLFMEMNHK---GFMPNEITMIGVLSACNHSGLVEEGKRWFKAMEEFGLTP 417
Query: 284 DSFISNALIDMYGKCGSLKEARR 306
++D+ G+ G L+EA +
Sbjct: 418 KIEHYGCMVDLLGRAGCLQEAEK 440
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 127/323 (39%), Gaps = 47/323 (14%)
Query: 191 YTRVGDIKNAASLFDSMPDRD-VPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
Y + I +A +FD P RD NS+I +S++ + +R + S P+
Sbjct: 30 YDPLAGIVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTS--FTPD 87
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
T + + G+ IH +V G LD + + AL+DMY K G + AR+ FD
Sbjct: 88 SFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFD 147
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
+ SW ++I + G +N+ +F++M I D F ++++A G
Sbjct: 148 EMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQM-------IEKDSAAFNTMIDAYVKLGD 200
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYG-----------CLVDLLGRAGRFE----------- 407
+ R F M + + I YG L D + F
Sbjct: 201 MCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYRQN 260
Query: 408 ----EALEVVKGMK----IEPDEVVWGSLLNGCKIYGRTDFA----EFAVKKLIEIDPNN 455
EAL++ M+ +EPDEV S+L G D F +K ++ N
Sbjct: 261 KQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATN- 319
Query: 456 GGYGIMLANIYGELGKWDEVRKV 478
G L ++Y + G+ + R V
Sbjct: 320 --VGTALIDMYAKCGEIVKSRGV 340
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/484 (33%), Positives = 267/484 (55%), Gaps = 45/484 (9%)
Query: 40 GQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAF 98
G Q + A KL+ +C L ++ +A +FD +++ A+ A A +
Sbjct: 104 GLDQDPYLATKLINMYC--DLGSVDHACKVFDETREKTIFVWNAIFRALA-MASRGEDLL 160
Query: 99 SLYRDMVRRGQPQPNQFIYPHVLKSCP----DVLESRGTKMVHTQIVKSGFEQYPVVETA 154
LY M G P N+F Y +VLK+C + R K +H I++ G+E + V T
Sbjct: 161 VLYGQMNWIGIPS-NRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTT 219
Query: 155 LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA 214
L++ Y+R G + A+S+F +MPD+++ +
Sbjct: 220 LLDVYAR--------------------------------FGYVSYASSVFGAMPDKNIVS 247
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
W+++IA +N + A+ F+ M +E D + PN +T+V L A L+ GK++H
Sbjct: 248 WSAMIACYAKNEMPMKALELFQIMMLEACDTV-PNPITMVSVLQACASLAALEHGKLVHA 306
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
YV R GLD + N LI MYG+CG + +R FD K+ + SWNS+I+ + +HG +
Sbjct: 307 YVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKK 366
Query: 335 SICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG 394
+I +FE M+ + + P +TFI++L AC+H GLVE+ + F+ M YRI P++EHY
Sbjct: 367 AIQIFENMI---NRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYA 423
Query: 395 CLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPN 454
C+VD+LGRA R +EA+E+++ M +P VWGSLL C+I+ + AE A L E++P
Sbjct: 424 CMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPK 483
Query: 455 NGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPR 514
N G ++L++IY + W++VR+VRK L+ R K P CSWIEV ++++ S+++ +P+
Sbjct: 484 NAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQ 543
Query: 515 TEEI 518
EE+
Sbjct: 544 IEEL 547
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 141/341 (41%), Gaps = 43/341 (12%)
Query: 109 QPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGI 168
+P P + + ++ SC + VH ++V SG +Q P + T L+N Y
Sbjct: 69 EPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMY--------- 119
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
+G + +A +FD ++ + WN++
Sbjct: 120 -----------------------CDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRG 156
Query: 229 SDAISFFRRM---GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
D + + +M G+ S+ V C +S + L+ GK IH ++ R+G +
Sbjct: 157 EDLLVLYGQMNWIGIP-SNRFTYTYVLKACVVSELS-ICPLRKGKEIHAHILRHGYEGHV 214
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
+ L+D+Y + G + A F K + SW++MI +A + ++ +F+ MM
Sbjct: 215 HVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMML- 273
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
+ + P+ +T +S+L AC +E G+ + + ++ + L+ + GR G
Sbjct: 274 EACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRR-GLDSTLPVLNTLITMYGRCGE 332
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
V MK + D + W SL++ IYG + A++
Sbjct: 333 ISTGQRVFDYMK-KRDVISWNSLIS---IYGMHGLGKKAIQ 369
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/473 (34%), Positives = 256/473 (54%), Gaps = 25/473 (5%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
++ L AR++FD + + + MI+ YA Q S A L+ + R +
Sbjct: 215 VRKKKLGDARWLFDKMPVRDAISWNTMISGYA-QGGGLSQARRLFDESPTRDVFTWTAMV 273
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKL 172
+V D K+ F++ P V A++ Y ++ + IAR+L
Sbjct: 274 SGYVQNGMLDE-------------AKTFFDEMPEKNEVSYNAMIAGYVQT-KKMDIAREL 319
Query: 173 FDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAI 232
F+ M RN+ SW MI+GY ++GDI A FD MP RD +W ++IAG Q+G + +A+
Sbjct: 320 FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEAL 379
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALI 292
+ F + D N+ T CALS L+LGK IHG + G F+ NAL+
Sbjct: 380 NMFVEIK---QDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALL 436
Query: 293 DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
MY KCGS+ EA F+ +K + SWN+M+ +A HG ++ VFE M + ++P
Sbjct: 437 AMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESM---KTAGVKP 493
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
D +T + +L+AC+H GL+++G YF MTK Y + P +HY C++DLLGRAGR EEA ++
Sbjct: 494 DEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDL 553
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKW 472
++ M +P WG+LL +I+G T+ E A + + +++P N G ++L+N+Y G+W
Sbjct: 554 IRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRW 613
Query: 473 DEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ K+R ++D K PG SW+EV ++H F D +HP E IY LE +
Sbjct: 614 VDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEEL 666
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 173/405 (42%), Gaps = 55/405 (13%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + + ++++ YA Q + A ++ +M + N + +V
Sbjct: 130 ARRLFDLMPEKDVVSWNSLLSGYA-QNGYVDEAREVFDNMPEKNSISWNGLLAAYV---- 184
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
G + +S + + L+ + R +G AR LFD+M R+ +SW
Sbjct: 185 -----HNGRIEEACLLFESKSDWDLISWNCLMGGFVRK-KKLGDARWLFDKMPVRDAISW 238
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
MISGY + G + A LFD P RDV W ++++G QNG+ +A +FF M
Sbjct: 239 NTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----- 293
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGK-VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
N+V+ ++ T + + + + RN + S+ N +I YG+ G + +
Sbjct: 294 --EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRN---ISSW--NTMITGYGQIGDIAQ 346
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG-----VTFI 358
AR+ FD ++ SW ++I +A G E ++ +F E I+ DG TF
Sbjct: 347 ARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVE--------IKQDGESLNRATFG 398
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG-------CLVDLLGRAGRFEEALE 411
L+ C +E G+ K YG L+ + + G +EA +
Sbjct: 399 CALSTCADIAALELGKQIHGQAVKM--------GYGTGCFVGNALLAMYFKCGSIDEAND 450
Query: 412 VVKGMKIEPDEVVWGSLLNGCKI--YGRTDFAEFAVKKLIEIDPN 454
+G++ E D V W ++L G +GR F K + P+
Sbjct: 451 TFEGIE-EKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPD 494
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 169/397 (42%), Gaps = 78/397 (19%)
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
V A+++ Y R+ + +AR LFD+M +R++ SW M++GY R + +A LFD MP+
Sbjct: 81 VSYNAMISGYLRN-SKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPE 139
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI-RPNQVTLVCALSAIGHTG---- 264
+DV +WNS+++G QNG +A EV DN+ N ++ L+A H G
Sbjct: 140 KDVVSWNSLLSGYAQNGYVDEA--------REVFDNMPEKNSISWNGLLAAYVHNGRIEE 191
Query: 265 ------------MLQLGKVIHGYVYRNGLD-----------LDSFISNALIDMYGKCGSL 301
++ ++ G+V + L D+ N +I Y + G L
Sbjct: 192 ACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGL 251
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD--HNIRPDGVT--- 356
+ARR FD + + + +W +M++ + +G + + F+EM + +N G
Sbjct: 252 SQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTK 311
Query: 357 ---------------FISLLNACTHG----GLVEQGRAYFKLMTKTYRIEPQIE--HYGC 395
IS N G G + Q R +F +M PQ + +
Sbjct: 312 KMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMM-------PQRDCVSWAA 364
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNN 455
++ ++G +EEAL + ++I+ D GC + D A + K I
Sbjct: 365 IIAGYAQSGHYEEALNMF--VEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVK 422
Query: 456 GGYGI------MLANIYGELGKWDEVRKVRKMLKDRN 486
GYG L +Y + G DE + +++++
Sbjct: 423 MGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKD 459
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 141/337 (41%), Gaps = 48/337 (14%)
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
+ D +++ W IS + R G +A +F++MP R ++N++I+G +N F+ A + F
Sbjct: 44 VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF 103
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
+M P + + G+ +LG + D+ S+ N+L+ Y
Sbjct: 104 DQM---------PERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSW--NSLLSGY 152
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEE-------------- 341
+ G + EAR FD +K SWN ++ ++ +G+ E + +FE
Sbjct: 153 AQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMG 212
Query: 342 -MMRCQ---------DHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE 391
+R + D D +++ ++++ GG + Q R F +
Sbjct: 213 GFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTR-----DVF 267
Query: 392 HYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
+ +V + G +EA M E +EV + +++ G + D A ++L E
Sbjct: 268 TWTAMVSGYVQNGMLDEAKTFFDEMP-EKNEVSYNAMIAGYVQTKKMDIA----RELFES 322
Query: 452 DP--NNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
P N + M+ YG++G + RK M+ R+
Sbjct: 323 MPCRNISSWNTMITG-YGQIGDIAQARKFFDMMPQRD 358
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 272/529 (51%), Gaps = 52/529 (9%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
+ +L+ C + L+Q+ + + G Q +F + + C LSN +Y +F+ +
Sbjct: 25 TSSISTLLKACTTTSTLEQVHARIIRKGLHQDHFLISQFLTLCN-SLSNFSYTTSVFNGV 83
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
++P+T L+ I Y S+ S SL+ M +R P++F YP ++K+C V +
Sbjct: 84 SSPSTVLWNTYIKGY-SENYSVSLTVSLFIRM-KRSDAVPDKFTYPSLIKACSKVCGVKE 141
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
H V+ G V T+L++ Y + G +I ARK+FDEM +RNVVSWTAMI+GY
Sbjct: 142 GVAFHGSAVRCGVGGDVFVMTSLIDLYGKCG-EILCARKVFDEMGERNVVSWTAMIAGYA 200
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM-------------G 239
D+ A LFD MP+++ +WN++I+G + G A F M G
Sbjct: 201 SFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDG 260
Query: 240 MEVSD-------------------------------NIRPNQVTLVCALSAIGHTGMLQL 268
S N++P++ +V +SA G L+L
Sbjct: 261 YAKSGDMASARFVFEEAPERDVVAWSALIFRVCAEWNVKPDEFIMVSLMSACSQMGSLEL 320
Query: 269 GKVIHGYVYRNGLDLD-SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFA 327
K + YV ++ +D+ + + ALIDM KCGS+ A + F+ K+ L S+ SM+ +
Sbjct: 321 AKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLS 380
Query: 328 LHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIE 387
+HG ++ +F M+ + + PD V F +L AC+ GLV++G YF+ M Y I
Sbjct: 381 IHGCGPQAVSLFSRML---NEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIV 437
Query: 388 PQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKK 447
P +HY C+VDLLGRAGR +EA E++K M +EP WG+LL CK++ + E +
Sbjct: 438 PSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQ 497
Query: 448 LIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWI 496
L E++P N G ++L+NIY +W +V +R +++R K PGCSWI
Sbjct: 498 LFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 546
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 185/582 (31%), Positives = 308/582 (52%), Gaps = 82/582 (14%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL-KLSNLTYARFIFDHL 72
++ L L +C ++N +KQL + + Q A KL+ +L + +NL A +F+ +
Sbjct: 20 EERLQDLPKCANLNQVKQLHAQIIRRNLHQDLHIAPKLISALSLCRQTNL--ALRVFNQV 77
Query: 73 TTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
PN +L ++I A+A SQP A F ++ +M R G N F YP +LK+C +
Sbjct: 78 QEPNVHLCNSLIRAHALNSQPYQA---FFVFSEMQRFGLFADN-FTYPFLLKACSGLSWL 133
Query: 131 RGTKMVHTQ--------------------------------------------------- 139
KM+H
Sbjct: 134 PVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLG 193
Query: 140 -IVKSG--------FEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
+VK+G F++ P + +++ Y+R ++ A +LF++M +RN VSW+
Sbjct: 194 GLVKAGELRDARKLFDEMPQRDLISWNTMLDGYARC-REMSRAFELFEKMPERNTVSWST 252
Query: 187 MISGYTRVGDIKNAASLFDSMP--DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
M+ GY++ GD++ A +FD MP ++V W +IAG + GL +A +M V+
Sbjct: 253 MVMGYSKAGDMEMARVMFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQM---VAS 309
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+R + + L+A +G+L LG H + ++ L+ ++ + NAL+DMY KCGSLK+A
Sbjct: 310 GLRFDAAAAISILAACAESGLLSLGMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKA 369
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F+ KK L SWN+M++ +HG + +I +F M + I PD VTFI++L +C
Sbjct: 370 FDVFNDMPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRK---EGIWPDKVTFIAVLCSC 426
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
H GL+++G YF M K Y + P++EHYGCLVDLLGR GR +EA++VV+ M +EP+ V+
Sbjct: 427 NHAGLIDEGIDYFYSMEKVYDLVPKVEHYGCLVDLLGRGGRLKEAIKVVQTMPMEPNVVI 486
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL C+++ D A+ + L+++DP++ G +L+NIY W+ V +R +K
Sbjct: 487 WGALLGACRMHNEVDIAKEVLDNLVKLDPSDPGNYTLLSNIYAAAEDWEGVADIRSKMKS 546
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K G S +E++ +H+F DK+HP++++IY L S++
Sbjct: 547 MGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLI 588
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 143/351 (40%), Positives = 221/351 (62%), Gaps = 6/351 (1%)
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
D ++ +++I Y + + ++ +F + +RD +WNS+IAGC QNGLF + + FFR+
Sbjct: 271 DADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQ 330
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M M I+P + + A H L LGK +HGY+ RNG D + FI+++L+DMY K
Sbjct: 331 MLMA---KIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAK 387
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG+++ A++ FDR + + SW +MI ALHGQ+ ++I +FE+M + I+P+ V F
Sbjct: 388 CGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQM---ETEGIKPNHVAF 444
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+++L AC+HGGLV++ YF MT+ + I P +EHY + DLLGRAGR EEA + + GM
Sbjct: 445 MAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMH 504
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
I P +W +LL+ C+++ D AE +++E+DPNN G I+LANIY +W E K
Sbjct: 505 IGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAK 564
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
R ++ KTP CSWIEV +V+ F + D++HP E+I +A+E +V L
Sbjct: 565 WRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVEL 615
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 200/411 (48%), Gaps = 25/411 (6%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F+ + P + ++I Y S S S + M+ G P+ ++P VLKSC +
Sbjct: 62 LFNTIHFPPALAWKSVIRCYTSHGLPHQSLGS-FIGMLASGL-YPDHNVFPSVLKSCALL 119
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSR------SGNDIGIARKLFDEMSDRNV 181
++ + +H I++ G + AL+N YS+ SG A ++FDEM++R
Sbjct: 120 MDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTR 179
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
T + V I F+ MP++D+ +WN++IAG +NGL+ + + R MG
Sbjct: 180 SVRTVSVLSEDSVRKI------FEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMG-- 231
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
N++P+ TL L I + GK IHG R GLD D +++++LIDMY KC +
Sbjct: 232 -GANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRV 290
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
++ R F +++ SWNS+I +G + + F +M+ + I+P +F S++
Sbjct: 291 ADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAK---IKPKSYSFSSIM 347
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
AC H + G+ +T+ + I LVD+ + G A ++ M++ D
Sbjct: 348 PACAHLTTLHLGKQLHGYITRN-GFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR-D 405
Query: 422 EVVWGSLLNGCKIYGRT-DFAEFAVKKLIE-IDPNNGGY-GIMLANIYGEL 469
V W +++ GC ++G+ D E + E I PN+ + ++ A +G L
Sbjct: 406 MVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGL 456
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F LT + + ++I A Q +R M+ + +P + + ++ +C +
Sbjct: 296 VFTLLTERDGISWNSII-AGCVQNGLFDEGLRFFRQMLM-AKIKPKSYSFSSIMPACAHL 353
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
K +H I ++GF++ + ++LV+ Y++ GN I A+++FD M R++VSWTAM
Sbjct: 354 TTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGN-IRTAKQIFDRMRLRDMVSWTAM 412
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVP----AWNSVIAGCTQNGLFSDAISFFRRM 238
I G G +A LF+ M + A+ +V+ C+ GL +A +F M
Sbjct: 413 IMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSM 467
>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 178/495 (35%), Positives = 261/495 (52%), Gaps = 53/495 (10%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + N + M+ AYAS +A +L+ M R N + V
Sbjct: 121 ARALFDRMPERNVVSWNTMLEAYAS-AGRMGAACALFDGMPVRDAGSWNILLAALVRSGT 179
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
D E+R FE+ P + T +++ +RSG+ AR LFD M +RN
Sbjct: 180 MD--EARRL-----------FERMPERNVMSWTTMISGLARSGS-ADEARALFDGMPERN 225
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM-- 238
VVSW AMISGY R I A LF +MP+RDV +WN +I G QN A F M
Sbjct: 226 VVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKKAQELFDEMPK 285
Query: 239 ---------------------------GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKV 271
GM V D IRPNQVT + A+ A + L G+
Sbjct: 286 RNVVSWTTMMNGCLQGNESEMALQVFNGMLV-DGIRPNQVTFLGAVDAGSNLAGLSEGQQ 344
Query: 272 IHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
+H + + D+FI ++L+ +Y KCG ++ AR+ FD + +K + SWN MI ++A HG
Sbjct: 345 VHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGMIAAYAHHGA 404
Query: 332 SENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE 391
+I ++E+M Q++ +P+ VT++ LL+AC+H GLV++G F+ M K I + E
Sbjct: 405 GVEAIALYEKM---QENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDE 461
Query: 392 HYGCLVDLLGRAGRFEEALEVVKGMKIEP-DEVVWGSLLNGCKIYGRTDFAEFAVKKLIE 450
HY CL+DL RAGR ++A ++ G+K++P VW +LL GC +G + A + L+E
Sbjct: 462 HYSCLIDLCSRAGRLDDAKRLINGLKLKPTSSTVWSALLGGCNAHGNESIGDLAARNLLE 521
Query: 451 IDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDK 510
+P+N G +L+NIY GKW E K+R + DR K PGCSWIE+ +VH F + DK
Sbjct: 522 AEPDNAGTYTLLSNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIELANKVHVFVARDK 581
Query: 511 THPRTEEIYDALESM 525
+H +E IY L+ +
Sbjct: 582 SHSESELIYSLLQDI 596
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 154/350 (44%), Gaps = 66/350 (18%)
Query: 145 FEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
F++ P V TA+V +Y+R G + L + RNVV+WTA++SGY R + A
Sbjct: 62 FDRTPDRDVVSWTAMVAAYARQGQLHEASALLHRPDARRNVVTWTALLSGYARARRVDEA 121
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD----NI---------- 246
+LFD MP+R+V +WN+++ G A + F GM V D NI
Sbjct: 122 RALFDRMPERNVVSWNTMLEAYASAGRMGAACALFD--GMPVRDAGSWNILLAALVRSGT 179
Query: 247 ------------RPNQVTLVCALSAIGHTG----------------MLQLGKVIHGYVYR 278
N ++ +S + +G ++ +I GY
Sbjct: 180 MDEARRLFERMPERNVMSWTTMISGLARSGSADEARALFDGMPERNVVSWNAMISGYARN 239
Query: 279 NGLD--LDSFIS---------NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFA 327
+D LD F++ N +I + + LK+A+ FD K+ + SW +M+N
Sbjct: 240 LRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSWTTMMNGCL 299
Query: 328 LHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT-YRI 386
+SE ++ VF M+ IRP+ VTF+ ++A ++ + +G+ +++ KT ++
Sbjct: 300 QGNESEMALQVFNGMLV---DGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQMICKTPFQF 356
Query: 387 EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
+ IE L+ L + G A +V + E D + W ++ +G
Sbjct: 357 DNFIE--SSLMKLYAKCGEIRLARKVFD-LSGEKDVISWNGMIAAYAHHG 403
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 125/267 (46%), Gaps = 29/267 (10%)
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD--RDVPAWNSVIAGCTQNG 226
AR+LFD DR+VVSWTAM++ Y R G + A++L PD R+V W ++++G +
Sbjct: 58 ARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASALLHR-PDARRNVVTWTALLSGYARAR 116
Query: 227 LFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG-KVIHGYVYRNGLDLDS 285
+A + F RM N V+ L A G + + G R D+
Sbjct: 117 RVDEARALFDRMP-------ERNVVSWNTMLEAYASAGRMGAACALFDGMPVR-----DA 164
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
N L+ + G++ EARR F+R ++ + SW +MI+ A G ++ + +F+ M
Sbjct: 165 GSWNILLAALVRSGTMDEARRLFERMPERNVMSWTTMISGLARSGSADEARALFDGM--- 221
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
+ N+ V++ ++++ +++ F M E + + ++ +
Sbjct: 222 PERNV----VSWNAMISGYARNLRIDEALDLFMNMP-----ERDVASWNIMITGFIQNKD 272
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGC 432
++A E+ M + + V W +++NGC
Sbjct: 273 LKKAQELFDEMP-KRNVVSWTTMMNGC 298
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 54/254 (21%)
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I+ G + +A LFD PDRDV +W +++A + G +A + R + R
Sbjct: 46 IAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASALLHR------PDAR 99
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
N VT AL+ Y + + EAR
Sbjct: 100 RNVVTWT-----------------------------------ALLSGYARARRVDEARAL 124
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FDR ++ + SWN+M+ ++A G+ + +F+ M +R G I LL A
Sbjct: 125 FDRMPERNVVSWNTMLEAYASAGRMGAACALFDGM------PVRDAGSWNI-LLAALVRS 177
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
G +++ R F+ M E + + ++ L R+G +EA + GM E + V W +
Sbjct: 178 GTMDEARRLFERMP-----ERNVMSWTTMISGLARSGSADEARALFDGMP-ERNVVSWNA 231
Query: 428 LLNGCKIYGRTDFA 441
+++G R D A
Sbjct: 232 MISGYARNLRIDEA 245
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 165/469 (35%), Positives = 262/469 (55%), Gaps = 17/469 (3%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + AR FD + + + +IT YA Q A L+ + P + F
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYA-QSGKIDEARQLFDE-----SPVQDVFT 283
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ ++ +++R + ++ E+ V A++ Y + G + +A++LFD M
Sbjct: 284 WTAMVSG---YIQNRMVEEAR-ELFDKMPERNEVSWNAMLAGYVQ-GERMEMAKELFDVM 338
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
RNV +W MI+GY + G I A +LFD MP RD +W ++IAG +Q+G +A+ F
Sbjct: 339 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+M E R N+ + ALS L+LGK +HG + + G + F+ NAL+ MY
Sbjct: 399 QMEREGG---RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 455
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCGS++EA F + K + SWN+MI ++ HG E ++ FE M R ++PD T
Sbjct: 456 KCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKR---EGLKPDDAT 512
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+++L+AC+H GLV++GR YF MT+ Y + P +HY C+VDLLGRAG E+A ++K M
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
EPD +WG+LL +++G T+ AE A K+ ++P N G ++L+N+Y G+W +V
Sbjct: 573 PFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVG 632
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K+R ++D+ K PG SWIE+ + H F D+ HP +EI+ LE +
Sbjct: 633 KLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEEL 681
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 151/313 (48%), Gaps = 29/313 (9%)
Query: 145 FEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
F++ P V +++ Y R+G + +ARKLFDEM +R++VSW MI GY R ++ A
Sbjct: 87 FKRMPRWSSVSYNGMISGYLRNG-EFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKA 145
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
LF+ MP+RDV +WN++++G QNG DA S F RM N V+ LSA
Sbjct: 146 RELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP-------EKNDVSWNALLSAY 198
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
++ ++ + R L S+ N L+ + K + EAR+ FD + + + SWN
Sbjct: 199 VQNSKMEEACML--FKSRENWALVSW--NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWN 254
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
++I +A G+ + + +F+E + D T+ ++++ +VE+ R F M
Sbjct: 255 TIITGYAQSGKIDEARQLFDE-------SPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+ + + ++ + R E A E+ M + W +++ G G+
Sbjct: 308 PERNEVS-----WNAMLAGYVQGERMEMAKELFDVMPCR-NVSTWNTMITGYAQCGKISE 361
Query: 441 AEFAVKKLIEIDP 453
A+ K+ + DP
Sbjct: 362 AKNLFDKMPKRDP 374
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 136/342 (39%), Gaps = 62/342 (18%)
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
D ++ W IS Y R G A +F MP ++N +I+G +NG F A F
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M P + + + G+ LGK + D+ S+ N ++ Y +
Sbjct: 121 M---------PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSW--NTMLSGYAQ 169
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF------------------ 339
G + +AR FDR +K SWN++++++ + + E + +F
Sbjct: 170 NGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGF 229
Query: 340 -------EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF------KLMTKTYRI 386
E N+R D V++ +++ G +++ R F + T T +
Sbjct: 230 VKKKKIVEARQFFDSMNVR-DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMV 288
Query: 387 EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
I++ EEA E+ M E +EV W ++L G Y + + E A K
Sbjct: 289 SGYIQNR-----------MVEEARELFDKMP-ERNEVSWNAMLAG---YVQGERMEMA-K 332
Query: 447 KLIEIDP--NNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+L ++ P N + M+ Y + GK E + + + R+
Sbjct: 333 ELFDVMPCRNVSTWNTMITG-YAQCGKISEAKNLFDKMPKRD 373
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 165/465 (35%), Positives = 268/465 (57%), Gaps = 12/465 (2%)
Query: 65 ARFIFDHL--TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
AR +FD + + +T +T ++ + + A ++ +M RR +P++ +
Sbjct: 69 ARKVFDEIPHSHKDTVDWTTLMGCFVRHNV-SDEALLIFVEM-RRCGVKPDEVTLVCLFG 126
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
C + + H +VK G A+++ Y++SG +G AR++F EM ++VV
Sbjct: 127 GCARLGDVVVGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGL-MGEARRVFYEMKGQSVV 185
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
SWT ++ G R ++N +FD MP+R+ AW +IAG +GL ++ + R M ++
Sbjct: 186 SWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDL 245
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG-LDLDSFISNALIDMYGKCGSL 301
+ N VTL L+A +G L +G+ +H Y + +L+ + A++DMY KCG +
Sbjct: 246 EMEL--NYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRI 303
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
A + F + ++ + SWN+M++ A+HG ++ +F +M + +PD VTF S+L
Sbjct: 304 HIAFKFFKKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFK----EAKPDDVTFTSVL 359
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
+AC+H GLV+QG YF + Y I P++EHY C+VDLLGRAGR EEA +V+ M I P+
Sbjct: 360 SACSHSGLVDQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPN 419
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
EVV GSLL C I+G+ E +++L+++DP N Y I+L+N+Y GK + +R++
Sbjct: 420 EVVLGSLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQV 479
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
LK R K PG S I V QVHQF + DK+HPRT E+Y+ L+ M+
Sbjct: 480 LKKRGIKKVPGMSSIHVGGQVHQFSAGDKSHPRTREVYNMLDEMI 524
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 9/170 (5%)
Query: 266 LQLGKVIHGYVYRNGLD--LDSFISNALIDMYGKCGSLKEARRAFDR--NSKKRLTSWNS 321
L +G+ +H + G+ ++F+ NAL+ Y CG +AR+ FD +S K W +
Sbjct: 29 LDIGERLHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKVFDEIPHSHKDTVDWTT 88
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
++ F H S+ ++ +F EM RC ++PD VT + L C G V G M
Sbjct: 89 LMGCFVRHNVSDEALLIFVEMRRC---GVKPDEVTLVCLFGGCARLGDVVVGAQGHGCMV 145
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
K + + ++D+ ++G EA V MK + V W +L+G
Sbjct: 146 KM-GLGGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQ-SVVSWTVILDG 193
>gi|224094065|ref|XP_002310070.1| predicted protein [Populus trichocarpa]
gi|222852973|gb|EEE90520.1| predicted protein [Populus trichocarpa]
Length = 438
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 161/418 (38%), Positives = 250/418 (59%), Gaps = 10/418 (2%)
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
P+ YP + K+ +L +H ++KSGFE V +L++ Y G DI ARK
Sbjct: 8 PDHLTYPFLAKATSRLLRKELGVSIHGHVIKSGFEIDRFVANSLIHMYGSCG-DIVYARK 66
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
+FD +N+VSW +M+ GY + G + A LFD MP+RDV +W+ +I G ++G + DA
Sbjct: 67 VFDGTPVKNLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKSGNYGDA 126
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
++ F +M + + N+VT+V L A H G L G+++H Y+ NG +L+ + +L
Sbjct: 127 MAVFEKM---RTSGPKANEVTMVSVLCACAHLGALDKGRMMHQYLVDNGFELNLVLRTSL 183
Query: 292 IDMYGKCGSLKEARRAFDRNS--KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
IDMY KCG+++EA F S K + WN+MI A HG + S+ ++ EM Q
Sbjct: 184 IDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTEM---QIAG 240
Query: 350 IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEA 409
I+PD +TF+ LL+AC HGGLV+Q F+ + K + P+ EHY C+VD++ RAG+ EA
Sbjct: 241 IKPDEITFLCLLSACAHGGLVKQASYVFEGLGKN-GMTPKTEHYACMVDVMARAGQVAEA 299
Query: 410 LEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGEL 469
+ + M +EP + G+LL+GC +G+ D AE KKLIE+DP + G + L+N+Y
Sbjct: 300 YQFLCQMPLEPTASMLGALLSGCMNHGKLDLAELIGKKLIELDPEHDGRYVGLSNVYAIG 359
Query: 470 GKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+WDE R +R+ ++ R KTPG S++E+ H+F + DK+HP +E+IY L +V+
Sbjct: 360 RRWDEARIMREAMERRGVKKTPGYSFLEMSGAHHRFIAHDKSHPSSEQIYTMLSFIVS 417
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 36/224 (16%)
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
I P+ +T A +LG IHG+V ++G ++D F++N+LI MYG CG + A
Sbjct: 5 GIYPDHLTYPFLAKATSRLLRKELGVSIHGHVIKSGFEIDRFVANSLIHMYGSCGDIVYA 64
Query: 305 RRAFDRNSKKRLTSWNSM-------------------------------INSFALHGQSE 333
R+ FD K L SWNSM I+ +A G
Sbjct: 65 RKVFDGTPVKNLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKSGNYG 124
Query: 334 NSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
+++ VFE+M + + + VT +S+L AC H G +++GR + + E +
Sbjct: 125 DAMAVFEKM---RTSGPKANEVTMVSVLCACAHLGALDKGRMMHQYLVDN-GFELNLVLR 180
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKI-EPDEVVWGSLLNGCKIYG 436
L+D+ + G EEA V +G+ + + D ++W +++ G +G
Sbjct: 181 TSLIDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHG 224
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 39/249 (15%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L AR +FD + + ++ +I YA + + A +++ M R P+ N+
Sbjct: 88 KCGYLDLARGLFDLMPERDVRSWSCLIDGYA-KSGNYGDAMAVFEKM-RTSGPKANEVTM 145
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
VL +C + +M+H +V +GFE V+ T+L++ Y++ G + A +F +S
Sbjct: 146 VSVLCACAHLGALDKGRMMHQYLVDNGFELNLVLRTSLIDMYAKCGA-VEEAFAVFRGVS 204
Query: 178 DR--NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
R +V+ W AMI G G +K + L+ M IAG
Sbjct: 205 LRKSDVLIWNAMIGGLATHGLVKESLDLYTEMQ----------IAG-------------- 240
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
I+P+++T +C LSA H G+++ + + +NG+ + ++D+
Sbjct: 241 ----------IKPDEITFLCLLSACAHGGLVKQASYVFEGLGKNGMTPKTEHYACMVDVM 290
Query: 296 GKCGSLKEA 304
+ G + EA
Sbjct: 291 ARAGQVAEA 299
>gi|222616851|gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japonica Group]
Length = 632
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 259/449 (57%), Gaps = 18/449 (4%)
Query: 39 LGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAF 98
+G + +FYA +L A +FD + + +T ++ YA + A A+
Sbjct: 180 VGNALVHFYA---------NHKSLDDAGKVFDEMPERDVVSWTTLVDGYA-RAGLADEAW 229
Query: 99 SLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNS 158
L+ MV G +PN + + + M+H + + G + ++ ALV+
Sbjct: 230 RLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDM 289
Query: 159 YSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSV 218
+ + G + AR++FD M ++V SWT+M++ Y + GD+++A LF MP R+V +W+ +
Sbjct: 290 FGKCGC-VRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCM 348
Query: 219 IAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH-GYVY 277
IA +Q +A+ FR M ++ + P TLV LSA G L LG+ I+ Y+
Sbjct: 349 IAAYSQLNQPEEAVWLFREM---IAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIV 405
Query: 278 RNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSIC 337
N + L + NALIDM+ KCG + EA + FD +++ + SWN+MI + A+HGQSE +I
Sbjct: 406 SNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIR 465
Query: 338 VFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLV 397
+FE++ + NI PD +TF+ LL +C+H GLV +GR YFK M YRIEP++EHY C++
Sbjct: 466 LFEQL---KGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMI 522
Query: 398 DLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGG 457
DLLG+ G EEA EV +GM +E DE WG+LLN C+++G + KL+E+DP++ G
Sbjct: 523 DLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVEIGACVADKLVELDPSDSG 582
Query: 458 YGIMLANIYGELGKWDEVRKVRKMLKDRN 486
++++ IY KWD+V+ +R ++DR
Sbjct: 583 IYVLMSQIYASKNKWDQVKMLRMTMRDRG 611
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 212/482 (43%), Gaps = 91/482 (18%)
Query: 5 TNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTY 64
TN+ N + +L++LE C L QL + LT G + F AF + FC L
Sbjct: 28 TNR-NLVVTHPLLSLLESCASFRRLLQLHALLTVTGLAGNGFPAFGFLAFCALSTPPRLA 86
Query: 65 ARFIFDHLTTP--NTYLYTAMITAY--ASQPAHASSAFSLYRDMVRRGQP-QPNQFIYPH 119
+P N Y+ M+ + A PA A L+R +VR P F++
Sbjct: 87 HAAAILARASPGPNAYMLGTMMRGFLRARLPARA---LGLFRRVVRDRLPADARTFVF-- 141
Query: 120 VLKSCPDVLESR------GTKMVHTQIVKSGFEQYPV-VETALVNSYS--RSGNDIGIAR 170
+K+ ES G + +H +K GF V V ALV+ Y+ +S +D G
Sbjct: 142 AVKAAAAAAESEHGGTPSGGEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAG--- 198
Query: 171 KLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSD 230
K+FDEM +R+VVSWT ++ GY R G A LF M V+ G
Sbjct: 199 KVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRM----------VVVG--------- 239
Query: 231 AISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNA 290
+RPN VTLV A+SAIG G+L G ++H YV G+ + NA
Sbjct: 240 --------------GMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNA 285
Query: 291 LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG-------------------- 330
L+DM+GKCG ++ AR FD K + SW SM+N++A G
Sbjct: 286 LVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSW 345
Query: 331 -----------QSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
Q E ++ +F EM+ + P T +S+L+AC G ++ GR ++
Sbjct: 346 SCMIAAYSQLNQPEEAVWLFREMIAA---GVDPIDATLVSVLSACAQLGCLDLGRWIYEN 402
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
+ +I + L+D+ + G EA ++ M E + V W +++ ++G+++
Sbjct: 403 YIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMA-ERNVVSWNTMIMAHAVHGQSE 461
Query: 440 FA 441
A
Sbjct: 462 EA 463
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 172/491 (35%), Positives = 262/491 (53%), Gaps = 43/491 (8%)
Query: 36 LTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHAS 95
L + G Q F A KL+ +L ++ AR +FD Y++ A+ A A
Sbjct: 104 LVSSGFDQDPFLATKLINM-YYELGSIDRARKVFDETRERTIYVWNALFRALA-MVGCGK 161
Query: 96 SAFSLYRDMVRRGQPQPNQFIYPHVLKSCP----DVLESRGTKMVHTQIVKSGFEQYPVV 151
LY M G P ++F Y VLK+C V + K +H I++ G+E
Sbjct: 162 ELLDLYVQMNWIGIPS-DRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEA---- 216
Query: 152 ETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRD 211
N+ T ++ Y + G + A S+F +MP ++
Sbjct: 217 ----------------------------NIHVMTTLLDVYAKFGSVSYANSVFCAMPTKN 248
Query: 212 VPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKV 271
+W+++IA +N + A+ F+ M +E D++ PN VT+V L A L+ GK+
Sbjct: 249 FVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSV-PNSVTMVNVLQACAGLAALEQGKL 307
Query: 272 IHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
IHGY+ R GLD + NALI MYG+CG + +R FD + + SWNS+I+ + +HG
Sbjct: 308 IHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGF 367
Query: 332 SENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE 391
+ +I +FE M+ P ++FI++L AC+H GLVE+G+ F+ M YRI P +E
Sbjct: 368 GKKAIQIFENMIH---QGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGME 424
Query: 392 HYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
HY C+VDLLGRA R +EA+++++ M EP VWGSLL C+I+ + AE A L E+
Sbjct: 425 HYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFEL 484
Query: 452 DPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKT 511
+P N G ++LA+IY E W E + V K+L+ R K PGCSWIEV ++V+ F S+D+
Sbjct: 485 EPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEH 544
Query: 512 HPRTEEIYDAL 522
+P+ EEI+ L
Sbjct: 545 NPQIEEIHALL 555
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 145/341 (42%), Gaps = 43/341 (12%)
Query: 109 QPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGI 168
+P P Q + H++ SC VH ++V SGF+Q P + T L+N
Sbjct: 73 EPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINM---------- 122
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
Y +G I A +FD +R + WN++ G
Sbjct: 123 ----------------------YYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCG 160
Query: 229 SDAISFFRRM---GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
+ + + +M G+ SD V C +S + LQ GK IH ++ R+G + +
Sbjct: 161 KELLDLYVQMNWIGIP-SDRFTYTFVLKACVVSELS-VSPLQKGKEIHAHILRHGYEANI 218
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
+ L+D+Y K GS+ A F K SW++MI FA + ++ +F+ MM
Sbjct: 219 HVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMM-L 277
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
+ H+ P+ VT +++L AC +EQG+ + + ++ + L+ + GR G
Sbjct: 278 EAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRR-GLDSILPVLNALITMYGRCGE 336
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
V MK D V W SL++ IYG F + A++
Sbjct: 337 ILMGQRVFDNMK-NRDVVSWNSLIS---IYGMHGFGKKAIQ 373
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 175/524 (33%), Positives = 281/524 (53%), Gaps = 55/524 (10%)
Query: 2 VSVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN 61
V+ + LN N ++L + ++ H+ ++ +G S YA K +
Sbjct: 149 VTFVSLLNAFTNPELLQLGQKV-HMEIVEAGLELEPRVGTSLVGMYA---------KCGD 198
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
++ AR IFD L N +T +I YA Q A L M ++ + PN+ + +L
Sbjct: 199 ISKARVIFDRLPEKNVVTWTLLIAGYAQQ-GQVDVALELLETM-QQAEVAPNKITFASIL 256
Query: 122 KSC--PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
+ C P LE K VH I++SG+ + E +VNS
Sbjct: 257 QGCTTPAALEH--GKKVHRYIIQSGYGR----ELWVVNS--------------------- 289
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
+I+ Y + G ++ A LF +P RDV W +++ G Q G +AI+ FRRM
Sbjct: 290 -------LITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQ 342
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
+ I+P+++T L++ LQ GK IH + G +LD ++ +AL+ MY KCG
Sbjct: 343 QQ---GIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCG 399
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSF-ALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
S+ +A F++ S++ + +W ++I A HG+ ++ F++M + I+PD VTF
Sbjct: 400 SMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKK---QGIKPDKVTFT 456
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
S+L+ACTH GLVE+GR +F+ M Y I+P +EHY C VDLLGRAG EEA V+ M
Sbjct: 457 SVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPF 516
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
P VWG+LL+ C+++ + E A + ++++DP++ G + L++IY G++++ KV
Sbjct: 517 IPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKV 576
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
R++++ R+ K PG SWIEVD +VH FH DK+HP +E+IY L
Sbjct: 577 RQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVEL 620
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 205/420 (48%), Gaps = 50/420 (11%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQS--QTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L+ C + L+Q + + +S Q N Y + K +LT AR +FD +
Sbjct: 52 GLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDR 111
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC--PDVLESRGT 133
N +TAMI A+ + + AF Y M G +P++ + +L + P++L+ G
Sbjct: 112 NIVSWTAMIEAFVAGNKNLE-AFKCYETMKLAG-CKPDKVTFVSLLNAFTNPELLQ-LGQ 168
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
K VH +IV++G E P V T+LV Y++ G DI AR +FD + ++NVV+WT +I+GY +
Sbjct: 169 K-VHMEIVEAGLELEPRVGTSLVGMYAKCG-DISKARVIFDRLPEKNVVTWTLLIAGYAQ 226
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
G + A L ++M +V PN++T
Sbjct: 227 QGQVDVALELLETMQQAEVA----------------------------------PNKITF 252
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
L L+ GK +H Y+ ++G + ++ N+LI MY KCG L+EAR+ F
Sbjct: 253 ASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPH 312
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ + +W +M+ +A G + +I +F M Q I+PD +TF S+L +C+ +++G
Sbjct: 313 RDVVTWTAMVTGYAQLGFHDEAINLFRRM---QQQGIKPDKMTFTSVLTSCSSPAFLQEG 369
Query: 374 -RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
R + +L+ Y ++ ++ LV + + G ++A V M E + V W +++ GC
Sbjct: 370 KRIHQQLVHAGYNLDVYLQ--SALVSMYAKCGSMDDASLVFNQMS-ERNVVAWTAIITGC 426
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 160/331 (48%), Gaps = 45/331 (13%)
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
++ +L+ C + + VH I+KSG + +E L++ Y++ G+ + AR++FD
Sbjct: 49 VFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGS-LTDARRVFDS 107
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
+ DRN+VSWTAMI + A +++M +AGC
Sbjct: 108 IRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMK----------LAGC------------- 144
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
+P++VT V L+A + +LQLG+ +H + GL+L+ + +L+ MY
Sbjct: 145 -----------KPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMY 193
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCG + +AR FDR +K + +W +I +A GQ + ++ + E M Q + P+ +
Sbjct: 194 AKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETM---QQAEVAPNKI 250
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKT-YRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
TF S+L CT +E G+ + + ++ Y E + L+ + + G EEA ++
Sbjct: 251 TFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWV--VNSLITMYCKCGGLEEARKLFS 308
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
+ D V W +++ G Y + F + A+
Sbjct: 309 DLP-HRDVVTWTAMVTG---YAQLGFHDEAI 335
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 104/200 (52%), Gaps = 9/200 (4%)
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L+ G+ +H + ++G+ + ++ N L+ MY KCGSL +ARR FD + + SW +MI +
Sbjct: 63 LEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEA 122
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG-RAYFKLMTKTY 384
F ++ + +E M + +PD VTF+SLLNA T+ L++ G + + +++
Sbjct: 123 FVAGNKNLEAFKCYETM---KLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGL 179
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
+EP++ LV + + G +A V+ E + V W L+ G G+ D A
Sbjct: 180 ELEPRVG--TSLVGMYAKCGDISKA-RVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALEL 236
Query: 445 VKKL--IEIDPNNGGYGIML 462
++ + E+ PN + +L
Sbjct: 237 LETMQQAEVAPNKITFASIL 256
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 153/462 (33%), Positives = 270/462 (58%), Gaps = 8/462 (1%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ +F+ L N +T +I + S L+ M R +QF ++ C
Sbjct: 324 AKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESV-ELFNQM-RAELMTLDQFALATLISGC 381
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
++ + +H+ +KSG Q VV +L++ Y++ N + A +F M+++++VSW
Sbjct: 382 CSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDN-LQSAESIFRFMNEKDIVSW 440
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T+MI+ +++VG+I A FD M ++V WN+++ Q+G D + + M E
Sbjct: 441 TSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSE--K 498
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
++RP+ VT V G +LG I G + GL LD+ ++NA+I MY KCG + EA
Sbjct: 499 DVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEA 558
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R+ FD + K + SWN+MI ++ HG + +I +F+++++ +PD ++++++L+ C
Sbjct: 559 RKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILK---RGAKPDYISYVAVLSGC 615
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLV++G++YF +M + + I P +EH+ C+VDLLGRAG EA +++ M ++P V
Sbjct: 616 SHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEV 675
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL+ CKI+G + AE A K + E+D + G +++A IY + GK D+ ++RK+++D
Sbjct: 676 WGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRD 735
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+ K PG SW+EV+ +VH F + D +HP+ I L+ ++
Sbjct: 736 KGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELM 777
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 186/407 (45%), Gaps = 15/407 (3%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+KL L+ A +F + + + +++ Y + +S S + M R G PN F
Sbjct: 82 VKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLES-FVSMHRSGDSSPNAFT 140
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ + +KSC + E + + K G + V ALV+ + R G + +A +LF +
Sbjct: 141 FAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGT-VDLASRLFVRI 199
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+ + +M+ GY + + +A LFDSMP+RDV +WN +++ +Q+G +A+
Sbjct: 200 KEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVV 259
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M S +R + T +L+A L+ GK +H V RN +D ++++AL+++Y
Sbjct: 260 DMQ---SKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYA 316
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG KEA+ F+ + +W +I F HG S+ +F +M + + D
Sbjct: 317 KCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQM---RAELMTLDQFA 373
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+L++ C + GR L K+ +I+ + L+ + + + A + + M
Sbjct: 374 LATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQSAESIFRFM 432
Query: 417 KIEPDEVVWGSLLNGCKIYG-----RTDFAEFAVKKLIEIDPNNGGY 458
E D V W S++ G R F + K +I + G Y
Sbjct: 433 N-EKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAY 478
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 157/348 (45%), Gaps = 42/348 (12%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ L+SC G + +H ++V G ++ L+++Y G R L ++
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDI 66
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+ NV++ M++GY ++G + +A LF MP RDV +WN++++G Q+ + ++ F
Sbjct: 67 AHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESF- 125
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+ M S + PN T A+ + G G L + G V + G DS ++ AL+DM+
Sbjct: 126 -VSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFV 184
Query: 297 KCGSLKEARR-------------------------------AFDRNSKKRLTSWNSMINS 325
+CG++ A R FD ++ + SWN M+++
Sbjct: 185 RCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSA 244
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
+ G+ ++ + +M Q +R D T+ S L AC + G+ +L + R
Sbjct: 245 LSQSGRVREALDMVVDM---QSKGVRLDSTTYTSSLTACARLSSLRWGK---QLHAQVIR 298
Query: 386 IEPQIEHY--GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
P I+ Y LV+L + G F+EA V + + + V W L+ G
Sbjct: 299 NLPCIDPYVASALVELYAKCGCFKEAKGVFNSLH-DRNNVAWTVLIAG 345
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 125/281 (44%), Gaps = 44/281 (15%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
++ N+ AR FD ++T N + AM+ AY A +Y M+ +P+ Y
Sbjct: 449 QVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAE-EDGLRMYNVMLSEKDVRPDWVTY 507
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+ K C D+ ++ + + VK G V A++ YS+ G I ARK+FD ++
Sbjct: 508 VTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGR-ILEARKVFDFLN 566
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR----DVPAWNSVIAGCTQNGLFSDAIS 233
+++VSW AMI+GY++ G K A +FD + R D ++ +V++GC+ +GL + S
Sbjct: 567 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKS 626
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
+F M+ NI P C ++D
Sbjct: 627 YFDM--MKRVHNISPGLEHFSC-----------------------------------MVD 649
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTS-WNSMINSFALHGQSE 333
+ G+ G L EA+ D K W +++++ +HG +E
Sbjct: 650 LLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNE 690
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 270/482 (56%), Gaps = 15/482 (3%)
Query: 46 FYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMV 105
F LV F K ++ A F + + +IT Y S+ A L+ M
Sbjct: 210 FVQTALVDF-YAKNGDMDSALMAFKEMPVKDPIPMNCLITGY-SKSGDVEEARRLFDSMP 267
Query: 106 RRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN- 164
RR N I + E R + Q+++ G + T + + +++G+
Sbjct: 268 RRTSASWNSMIACYAHGG-----EFREALTLFDQMLREGASPNAITITTVFSICAKTGDL 322
Query: 165 DIGI-ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCT 223
D G AR E +NV+ TA++ Y + I A FD MP RDV AW+++IAG +
Sbjct: 323 DTGRRARAWIREEDLQNVIVHTALMEMYVKCRAIDEARHEFDRMPRRDVVAWSTMIAGYS 382
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL 283
QNG +++ F RM + N +PN+VTLV LSA G +LG+ I Y+ L L
Sbjct: 383 QNGRPHESLELFERMK---ATNCKPNEVTLVGVLSACAQLGSDELGEQIGNYIESQTLPL 439
Query: 284 DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
S++ +ALIDMY KCG + AR F+R +K + +WNSMI AL+G +E++I ++ +M+
Sbjct: 440 TSYLGSALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALNGFAEDAIALYRKMV 499
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
I+P+ VTF++LL ACTH GLV++G A+F+ M K + PQ+EH C+VDLL ++
Sbjct: 500 ---GDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQVEHCACIVDLLCKS 556
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLA 463
GR EA + + M++EP+ V+W +LL+ C+ + + A+ A KL+ ++PNN ++L+
Sbjct: 557 GRLWEAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAGKLVALEPNNSSIYVLLS 616
Query: 464 NIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
NIY + G W +VR++R +++ +N K SWIE+D +VH+F D HPR+ EIY+ ++
Sbjct: 617 NIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELDGEVHRFLVQDTYHPRSAEIYNVVD 676
Query: 524 SM 525
+
Sbjct: 677 GL 678
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 198/407 (48%), Gaps = 28/407 (6%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + P L A ++ + H + + RRG P+ I P VLKSC
Sbjct: 127 ARHLFDVVPRPTAALCCAFLSGLSKLSLH-QEFIEVVSSLHRRGGAIPSGCI-PLVLKSC 184
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
S H + G V+TALV+ Y+++G D+ A F EM ++ +
Sbjct: 185 AQSAASCQGSQTHCHALVRGMLGDVFVQTALVDFYAKNG-DMDSALMAFKEMPVKDPIPM 243
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+I+GY++ GD++ A LFDSMP R +WNS+IA G F +A++ F +M + +
Sbjct: 244 NCLITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQM---LRE 300
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
PN +T+ S TG L G+ ++ L + + AL++MY KC ++ EA
Sbjct: 301 GASPNAITITTVFSICAKTGDLDTGRRARAWIREEDLQ-NVIVHTALMEMYVKCRAIDEA 359
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R FDR ++ + +W++MI ++ +G+ S+ +FE M + N +P+ VT + +L+AC
Sbjct: 360 RHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLELFERM---KATNCKPNEVTLVGVLSAC 416
Query: 365 THGG---LVEQGRAYFKLMTKTYRIEPQIEHYG-CLVDLLGRAGRFEEALEVVKGMKIEP 420
G L EQ Y + T P + G L+D+ + G A V M+ +
Sbjct: 417 AQLGSDELGEQIGNYIESQTL-----PLTSYLGSALIDMYTKCGHVARARSVFNRME-QK 470
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAV---KKLI--EIDPNNGGYGIML 462
V W S++ G + G FAE A+ +K++ I PN + +L
Sbjct: 471 VVVTWNSMIRGLALNG---FAEDAIALYRKMVGDGIQPNEVTFVALL 514
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/518 (33%), Positives = 286/518 (55%), Gaps = 55/518 (10%)
Query: 22 RCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARFIFDHLTTPNTYLY 80
RC + H+KQ+ + + G +L+ + + + +A +FD + P+ ++Y
Sbjct: 17 RCRSLRHIKQMHAVMALRGFLSDPSELRELLFASAVAVRGAIAHAYLVFDQIPRPDRFMY 76
Query: 81 TAMITAYASQPAHASSAFSLYRDMVRRGQP---QPNQFIYPHVLKSCPDVLESRGTKMVH 137
+I A+ A A SLY M+RRG +P++ +P VL++C + VH
Sbjct: 77 NTLIRG-AAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVH 135
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG------- 190
+VK+G E V+ AL+ ++ GN +GIA LFD + + V+W+AMI+G
Sbjct: 136 AHVVKAGCESDAFVKNALIGMHASCGN-LGIAAALFDGRAREDAVAWSAMITGCARRGDI 194
Query: 191 ------------------------YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNG 226
Y + GD+ A LFD +P+RDV +WN +I+G + G
Sbjct: 195 GAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCG 254
Query: 227 LFSDAISFF---RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV----YRN 279
A+ F +RMG +P+ VT++ LSA +G L +G+ +H + RN
Sbjct: 255 SHLHALELFEQMQRMGE------KPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRN 308
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
G + + NALIDMY KCGS+K A F K +++WNS++ ALHG SI +F
Sbjct: 309 GFPV--VLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMF 366
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
E+M++ + +RPD +TF+++L AC+HGG+V++GR +F LM YR+EP I+HYGC+VD+
Sbjct: 367 EKMLKGK---VRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDM 423
Query: 400 LGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYG 459
LGRAG +EA E + MK EP+ V+W +LL+ C+++G + A+ A ++L++ + G
Sbjct: 424 LGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDY 483
Query: 460 IMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
++L+NIY +G+W K+RK++ D K G ++++
Sbjct: 484 VLLSNIYASVGEWFGSEKMRKLMDDSGVNKEAGQTFVD 521
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 164/469 (34%), Positives = 262/469 (55%), Gaps = 12/469 (2%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+++ L AR IFD + N ++AMI Y Q + + L+ M++ G +PN
Sbjct: 261 VEMDELGEARRIFDEMPQRNEVSWSAMIARYC-QSGYPEESLRLFCRMIQEGF-KPNISC 318
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ +L + V + +H + K GFE+ V ++L++ Y + G + R LFD +
Sbjct: 319 FSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCG-ETKDGRFLFDTI 377
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
++N+VSW AM+ GY+ G ++ A LF+ MP R+ +W+++IAG F + F
Sbjct: 378 LEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFN 437
Query: 237 RMGM--EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
M + E+ PN+ T L A T L GK +HG + + G+ D+++ AL DM
Sbjct: 438 EMILLGEI-----PNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDM 492
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y K G ++ +++ F+R KK SW +MI A G +E S+ +FEEM + +I P+
Sbjct: 493 YAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTS--SIAPNE 550
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
V F+++L AC+H GLV++G YF M Y ++P+ H+ C+VD+L RAGR EA E +
Sbjct: 551 VMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIY 610
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M +P+ W +LL+GCK Y + AE KL E+ N ++L+NIY G+W +
Sbjct: 611 SMPFQPETNAWAALLSGCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRD 670
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
V KVRK++K + K+ GCSW+E+ +VH F+S D H ++ EIY+ LE
Sbjct: 671 VLKVRKLMKAKGLKKSGGCSWVEIRDRVHSFYSEDGAHSQSAEIYEILE 719
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 203/431 (47%), Gaps = 69/431 (16%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYAS------------------------------Q 90
NL AR +FD + N +TA+I+ + Q
Sbjct: 102 NLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAAISGYVQ 161
Query: 91 PAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPV 150
+ A L+ ++ + +PN+ + V+++C ++ + V IVK+G+E
Sbjct: 162 NGFSVEAMKLFIKLL-ESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLA 220
Query: 151 VETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR 210
V +L+ R G +I +AR++FD M +++VVSWTA++ Y + ++ A +FD MP R
Sbjct: 221 VSNSLITLCLRMG-EIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQR 279
Query: 211 DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK 270
+ +W+++IA Q+G +++ F RM + + +PN LSA+ LQ G
Sbjct: 280 NEVSWSAMIARYCQSGYPEESLRLFCRM---IQEGFKPNISCFSSILSALASVEALQAGM 336
Query: 271 VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG 330
IHG+V + G + D F+S++LIDMY KCG K+ R FD +K + SWN+M+ ++L+G
Sbjct: 337 NIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNG 396
Query: 331 QSENSICV------------------------FEEMMRCQDHNIR----PDGVTFISLLN 362
E + + F+EM + I P+ TF SLL
Sbjct: 397 HMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLC 456
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY--GCLVDLLGRAGRFEEALEVVKGMKIEP 420
AC +++G+ L K ++ Q + Y L D+ ++G E + +V M +
Sbjct: 457 ACASTASLDKGK---NLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMP-KK 512
Query: 421 DEVVWGSLLNG 431
+EV W +++ G
Sbjct: 513 NEVSWTAMIQG 523
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 202/445 (45%), Gaps = 67/445 (15%)
Query: 85 TAYASQPA-----HASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV--- 136
T A PA +A + SL +++ +G + ++ H+ K+ + K++
Sbjct: 7 TLLAINPATHFKTYAQTCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMY 66
Query: 137 --------HTQIVKS--GFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
QI K GF+ VV ++++ + GN + ARKLFDEM N +SWTA
Sbjct: 67 LNYRKSAEADQISKDFDGFDL--VVHNCMISANVQRGN-LDEARKLFDEMPQTNEISWTA 123
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
+ISG+ + G ++ + F+ P ++V +W + I+G QNG +A+ F ++ + +
Sbjct: 124 LISGFMKYGRVRESMWYFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKL---LESEV 180
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALI-------------- 292
+PN+VT + A + G LG + G + + G + D +SN+LI
Sbjct: 181 KPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLARE 240
Query: 293 -----------------DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
D+Y + L EARR FD ++ SW++MI + G E S
Sbjct: 241 VFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEES 300
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ +F M++ +P+ F S+L+A ++ G +TK E +
Sbjct: 301 LRLFCRMIQ---EGFKPNISCFSSILSALASVEALQAGMNIHGHVTKI-GFEKDVFVSSS 356
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDP-- 453
L+D+ + G ++ + + +E + V W +++ G + G + A++ L I P
Sbjct: 357 LIDMYCKCGETKDGRFLFDTI-LEKNMVSWNAMVGGYSLNGHMEEAKY----LFNIMPVR 411
Query: 454 NNGGYGIMLANIYGELGKWDEVRKV 478
NN + ++A + + ++DE+ +V
Sbjct: 412 NNVSWSAIIAG-HLDCEQFDEMFEV 435
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 167/501 (33%), Positives = 268/501 (53%), Gaps = 47/501 (9%)
Query: 64 YARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
Y R IFD +T N + MI +Y + + A +++ M +G P+ + YP VLK+
Sbjct: 89 YTRHIFDEITDKNVVFFNVMIRSYVNNGLY-QDALLVFKTMANQGF-YPDNYTYPCVLKA 146
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
C +H +VK G + + LV+ Y + + AR++ DEM R++VS
Sbjct: 147 CSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKC-KWLDAARRVLDEMPGRDMVS 205
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPD---------------------------------- 209
W +M++GY + G +A L M D
Sbjct: 206 WNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVK 265
Query: 210 ---RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGML 266
+ + +WN +IA N + ++A+ + +M + + P+ V++ L A G
Sbjct: 266 LKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVH---GVEPDAVSISSVLPACGDLSAA 322
Query: 267 QLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSF 326
LG+ IH YV R L + + NALIDMY KCG LKEAR FD+ + + SW SMI+++
Sbjct: 323 VLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAY 382
Query: 327 ALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRI 386
+ GQ ++++ +F++M +D PD + F+S+L AC+H GLV++GR F LM + Y I
Sbjct: 383 GMSGQGKDAVALFKKM---RDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE-YGI 438
Query: 387 EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
P IEHY C+VDLLGRAG+ +EA + + M +EP+E VWGSLL+ C++Y + A A
Sbjct: 439 TPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAAD 498
Query: 447 KLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFH 506
L ++ P GY ++L+NIY + G+W +V VR ++ + K PG S +E++ V+ F
Sbjct: 499 HLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFL 558
Query: 507 SLDKTHPRTEEIYDALESMVA 527
+ D++H +++EIY AL +V
Sbjct: 559 AGDQSHTQSKEIYKALGVLVG 579
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 154/330 (46%), Gaps = 31/330 (9%)
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
++ L D+ N ++ Y G+ +FD + D++V +N +I NGL+
Sbjct: 59 SKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLY 118
Query: 229 SDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS 288
DA+ F+ M + P+ T C L A +G L +G IHG V + GLD++ +I
Sbjct: 119 QDALLVFKTMA---NQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIG 175
Query: 289 NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDH 348
N L+ MYGKC L ARR D + + SWNSM+ +A +G+ +++ + EM +D
Sbjct: 176 NGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREM---EDL 232
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
++PD T SLL A T+ Y K M + E + + ++ + E
Sbjct: 233 KLKPDAGTMGSLLPAVTNTSC--DNVLYVKDMFVKLK-EKSLISWNVMIAVYVNNAMPNE 289
Query: 409 ALEVVKGMK---IEPDEVVWGSLLNGC-----KIYGRTDFAEFAVKKLIEIDPNNGGYGI 460
A+++ M+ +EPD V S+L C + GR E+ +K ++ PN +
Sbjct: 290 AVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRR-IHEYVERK--KLRPN-----L 341
Query: 461 MLAN----IYGELGKWDEVRKV--RKMLKD 484
+L N +Y + G E R V + M +D
Sbjct: 342 LLENALIDMYAKCGCLKEARAVFDQMMFRD 371
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 168/473 (35%), Positives = 263/473 (55%), Gaps = 45/473 (9%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K ++ A+F+FD + P+ Y A+I+ Y S S+ L++++ G +PN
Sbjct: 259 KCGDMDSAQFLFDRMDNPDLVAYNALISGY-SVNGMVESSVELFKELTASGW-RPNSSTL 316
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
V+ + +H +VK+ + +V TAL
Sbjct: 317 VAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALT--------------------- 355
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+ Y R+ D+++A S+FD+M ++ + +WN++I+G QNGL A++ F+
Sbjct: 356 -----------TLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQL 404
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M E+ N++PN +T+ LSA H G L LGK +H + + L+L+ ++ ALIDMY K
Sbjct: 405 M-QEL--NVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAK 461
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CGS+ EAR FDR K + SWN+MI+ + LHGQ ++ ++++M+ D I P TF
Sbjct: 462 CGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDML---DARILPTSSTF 518
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM- 416
+S++ AC+HGGLV++G+ F++MT YRI P IEH C+VDLLGRAG+ EALE++
Sbjct: 519 LSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFP 578
Query: 417 --KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
I P VWG+LL C ++ +D A+ A +KL E+D N GY ++L+N+Y + E
Sbjct: 579 QSAIGPG--VWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSE 636
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
VR+ K R KTPGC+ IE+ + H F + D HP++E IY LE + A
Sbjct: 637 AAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTA 689
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 223/475 (46%), Gaps = 54/475 (11%)
Query: 22 RCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYT 81
R N + L G + F A L + KLS AR +FD + +P+T L+
Sbjct: 126 RGNDAAAARTLHGLSVAAGYAADTFVASALAKL-YFKLSRGDDARKVFDTVPSPDTILWN 184
Query: 82 AMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIV 141
++ A P S A + MV G+ +P+ L++ + + VH V
Sbjct: 185 TLL---AGLP--GSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGV 239
Query: 142 KSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAA 201
K G ++ V T L++ YS+ G D+ A+ LFD M + ++V++ A+ISGY
Sbjct: 240 KCGLAEHEHVVTGLMSLYSKCG-DMDSAQFLFDRMDNPDLVAYNALISGY---------- 288
Query: 202 SLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIG 261
+ NG+ ++ F+ + + RPN TLV +
Sbjct: 289 ---------------------SVNGMVESSVELFKEL---TASGWRPNSSTLVAVIPVYS 324
Query: 262 HTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNS 321
G L + +H +V + LD D+ +S AL +Y + ++ AR FD +K + SWN+
Sbjct: 325 PFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNA 384
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
MI+ +A +G +E ++ +F+ M Q+ N++P+ +T S L+AC H G + G+ ++++
Sbjct: 385 MISGYAQNGLTEMAVALFQLM---QELNVQPNPITISSTLSACAHLGALSLGKWVHRIIS 441
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
K ++E + L+D+ + G EA + M + V W ++++G ++G+ A
Sbjct: 442 KE-KLELNVYVMTALIDMYAKCGSIAEARSIFDRMD-NKNVVSWNAMISGYGLHGQGAEA 499
Query: 442 EFAVKKLIE--IDPNNGGY-GIMLANIYGELGKWDEVRKVRKMLKDRNAYK-TPG 492
K +++ I P + + ++ A +G G DE +KV +++ N Y+ TPG
Sbjct: 500 LKLYKDMLDARILPTSSTFLSVIYACSHG--GLVDEGQKVFRVMT--NEYRITPG 550
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 193/452 (42%), Gaps = 75/452 (16%)
Query: 81 TAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQI 140
TA++ YAS A S L+R P P++F+ +L+S P + H
Sbjct: 57 TALLLRYASLRAPPSHLLRLFRAF-----PCPDRFLRNALLRSLPSLRP-------HLLF 104
Query: 141 VKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD------EMSDRNVVSWTAMISGYTRV 194
+ T+L +S S GND AR L +D V S A + Y ++
Sbjct: 105 PSPDSFSFAFAATSLSSSCSSRGNDAAAARTLHGLSVAAGYAADTFVASALAKL--YFKL 162
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
+A +FD++P D WN+++AG S+A+ F RM + +RP+ TL
Sbjct: 163 SRGDDARKVFDTVPSPDTILWNTLLAGLPG----SEALEAFVRM--VDAGRVRPDSTTLA 216
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
+L A + +G+ +HGY + GL + L+ +Y KCG + A+ FDR
Sbjct: 217 SSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNP 276
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS-----------LLNA 363
L ++N++I+ ++++G E+S+ +F+E+ RP+ T ++ LL
Sbjct: 277 DLVAYNALISGYSVNGMVESSVELFKEL---TASGWRPNSSTLVAVIPVYSPFGHELLAR 333
Query: 364 CTHGGLV------------------------EQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
C H +V E R+ F M +E +E + ++
Sbjct: 334 CLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAM-----LEKTMESWNAMISG 388
Query: 400 LGRAGRFEEAL---EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNG 456
+ G E A+ ++++ + ++P+ + S L+ C G ++ V ++I +
Sbjct: 389 YAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKW-VHRIISKEKLEL 447
Query: 457 GYGIMLA--NIYGELGKWDEVRKVRKMLKDRN 486
+M A ++Y + G E R + + ++N
Sbjct: 448 NVYVMTALIDMYAKCGSIAEARSIFDRMDNKN 479
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 276/509 (54%), Gaps = 41/509 (8%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPN 76
++ L +C +I +KQ+ + +TT G A KL+ C K +L A +F+ + +
Sbjct: 7 ISTLFKCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCA-KHKDLVTAHLLFNKMEERD 65
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
++ MI + + F +R+++R G +P+ F P V+K+C D + +++
Sbjct: 66 PVSWSVMIGGFVKNGDY-ERCFQTFRELIRAGS-KPDNFSLPFVIKACRDTMGLIMGRLI 123
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGD 196
H+ ++K+G V + LV+ Y++ G
Sbjct: 124 HSTVLKNGLHLDNFVCSTLVDMYAKCGM-------------------------------- 151
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
I NA LFD MP +D+ +IAG + G +++ F +M D P++V +V
Sbjct: 152 IDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMR---RDGFVPDKVAMVTI 208
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
++A G + +++H YV LD + A+IDMY KCGS+ +R FDR +K +
Sbjct: 209 VNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNV 268
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
SW++MI ++ HGQ ++ +F M+ + I P+ +TFISLL AC+H GLV+ G
Sbjct: 269 ISWSAMIGAYGYHGQGREALELFHMML---NSGIIPNRITFISLLYACSHAGLVDDGLQL 325
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
F LM+ +Y + P ++HY C+VDLLGRAGR ++AL +++ M++E DE +W + L C+I+
Sbjct: 326 FSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHR 385
Query: 437 RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWI 496
+ D AE A K L+ + N G+ I+L+NIY G+W +V K+R ++ R K PG +WI
Sbjct: 386 QVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGYTWI 445
Query: 497 EVDKQVHQFHSLDKTHPRTEEIYDALESM 525
EVD +++F + D +H R+ EIY+ L+S+
Sbjct: 446 EVDNIIYRFGAGDNSHLRSNEIYEMLKSL 474
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 165/464 (35%), Positives = 261/464 (56%), Gaps = 39/464 (8%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR FD + TPN + TAM + + + S++R MV G V S
Sbjct: 143 ARRAFDEIPTPNPVIVTAMASG-CMRNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSA 201
Query: 125 PDVLESRG-TKMVHTQIVKSGFEQYPVVETALVNSYSRSG-NDIGIARKLFDEMSDRNVV 182
+ RG T +H + K G + V ++++Y++ G +D+G ARKLFD M
Sbjct: 202 SARVPDRGITGGIHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFDMM------ 255
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
DRDV +WN++IA QNGL ++A+ + +M + V
Sbjct: 256 --------------------------DRDVVSWNTMIALYAQNGLSTEALGLYSKM-LIV 288
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
++R N VTL L A H G +Q GK IH V R GL+ + ++ +++DMY KCG ++
Sbjct: 289 GGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVE 348
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
A +AF + K + SW++MI + +HG + ++ VF +M + ++P+ +TFI++L
Sbjct: 349 MAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKS---GLKPNYITFITVLA 405
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H GL+ +GR ++ M + IEP +EHYGC+VDLLGRAG +EA ++K MK++PD
Sbjct: 406 ACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDA 465
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
+WG+LL+ C+IY + A+ ++L E+D N GY ++L+NIY E G W EV ++R ++
Sbjct: 466 ALWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRVLV 525
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K R K PG S +E+ + H F+ DK+HP+ +EIY LE ++
Sbjct: 526 KTRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKLL 569
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 119/243 (48%), Gaps = 13/243 (5%)
Query: 199 NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
+A FD +P + ++ +GC +N L +S FR M S + ++ + ALS
Sbjct: 142 DARRAFDEIPTPNPVIVTAMASGCMRNNLVYTTLSIFRSMVASGSAGVV-DEAAALVALS 200
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS--LKEARRAFDRNSKKRL 316
A + IH V + GLD + ++N +ID Y K G L AR+ FD + +
Sbjct: 201 ASARVPDRGITGGIHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFDMMDRD-V 259
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
SWN+MI +A +G S ++ ++ +M+ ++R + VT ++L AC H G ++ G+
Sbjct: 260 VSWNTMIALYAQNGLSTEALGLYSKMLIVGG-DVRCNAVTLSAVLLACAHAGAIQTGKRI 318
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE---EALEVVKGMKIEPDEVVWGSLLNGCK 433
+ + +E + +VD+ + G+ E +A + +KG I + W +++ G
Sbjct: 319 HNQVVRM-GLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNI----LSWSAMIAGYG 373
Query: 434 IYG 436
++G
Sbjct: 374 MHG 376
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 10/211 (4%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM-VRRGQPQPNQFIYPH 119
+L AR +FD + + + MI YA Q ++ A LY M + G + N
Sbjct: 244 DLGAARKLFDMMDR-DVVSWNTMIALYA-QNGLSTEALGLYSKMLIVGGDVRCNAVTLSA 301
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
VL +C + K +H Q+V+ G E V T++V+ YS+ G + +A K F ++ +
Sbjct: 302 VLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGK-VEMAWKAFQKIKGK 360
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVP----AWNSVIAGCTQNGLFSDAISFF 235
N++SW+AMI+GY G + A +F M + + +V+A C+ GL S+ ++
Sbjct: 361 NILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSEGRYWY 420
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGML 266
M E I P C + +G G L
Sbjct: 421 NTMKTEF--GIEPGVEHYGCMVDLLGRAGCL 449
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 254/470 (54%), Gaps = 20/470 (4%)
Query: 61 NLTYARFIFDHL----TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
NL A+ +FD + + + +MI+ Y A+SL+RD+++ G +P+ F
Sbjct: 214 NLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLF-DEAYSLFRDLLKEG-IEPDSFT 271
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
VL C D+ R K H+ + G + +V ALV YS+ DI A+ FD +
Sbjct: 272 LGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKC-QDIVAAQMAFDGV 330
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMP----DRDVPAWNSVIAGCTQNGLFSDAI 232
S+R++ +W A+ISGY R + L M + +V WN +IAG +N + A+
Sbjct: 331 SERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENKQYDSAM 390
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALI 292
F M + N+RP+ T+ L+A +Q GK +H Y R G D D I AL+
Sbjct: 391 QLFTEMQIA---NLRPDIYTVGIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALV 447
Query: 293 DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
DMY KCG +K R ++ S L S N+M+ ++A+HG E I +F M+ + +RP
Sbjct: 448 DMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIALFRRMLASK---VRP 504
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
D VTF+++L++C H G +E G LM Y + P ++HY C+VDLL RAG+ EA E+
Sbjct: 505 DHVTFLAVLSSCVHAGSLEIGHECLALMV-AYNVMPSLKHYTCMVDLLSRAGQLYEAYEL 563
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKW 472
+K + E D V W +LL GC I+ D E A +KLIE++PNN G +MLAN+Y GKW
Sbjct: 564 IKNLPTEADAVTWNALLGGCFIHNEVDLGEIAAEKLIELEPNNPGNYVMLANLYASAGKW 623
Query: 473 DEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRT--EEIYD 520
+ + R+++KD K PGCSWIE +H F + D H T E+ +D
Sbjct: 624 HYLTQTRQLMKDMGMQKRPGCSWIEDRDGIHVFVAKDIYHTSTSKEDSFD 673
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 111/484 (22%), Positives = 194/484 (40%), Gaps = 92/484 (19%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
+IL+ C KQL + G + F KL++ S A +FD + N
Sbjct: 56 SILDSCGSPILGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCS-FENACHVFDTMPLRNL 114
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+ +TA++ Y + F + + + + + F++P VLK C + + +H
Sbjct: 115 HSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCAVELGRQMH 174
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
+K D+ A ++F S ++ S+ AMI+GY G++
Sbjct: 175 GMALKHD-------------------GDMKSAFEMFSRFSRKSAASYNAMIAGYWENGNL 215
Query: 198 KNAASLFDSMP----DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
A LFD M +D +WNS+I+G LF +A S FR + + + I P+ TL
Sbjct: 216 FKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDL---LKEGIEPDSFTL 272
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
L+ ++ GK H GL +S + AL++MY KC + A+ AFD S+
Sbjct: 273 GSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSE 332
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMR----------------------------- 344
+ L +WN++I+ +A Q+E + ++M R
Sbjct: 333 RDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENKQYDSAMQL 392
Query: 345 ---CQDHNIRPDGVTFISLLNACTHGGLVEQGR-------------------AYFKLMTK 382
Q N+RPD T +L AC+ +++G+ A + K
Sbjct: 393 FTEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALVDMYAK 452
Query: 383 ------TYRI-----EPQIEHYGCLVDLLGRAGRFEEALEVVKGM---KIEPDEVVWGSL 428
YR+ P + + ++ G EE + + + M K+ PD V + ++
Sbjct: 453 CGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPDHVTFLAV 512
Query: 429 LNGC 432
L+ C
Sbjct: 513 LSSC 516
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 145/353 (41%), Gaps = 71/353 (20%)
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
P+ Y +L SC + K +H +KSGF + V T L+ Y+R+ +
Sbjct: 49 PSSTTYASILDSCGSPILG---KQLHAHSIKSGFNAHEFVTTKLLQMYARNCS------- 98
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
+NA +FD+MP R++ +W +++ + G F +A
Sbjct: 99 -------------------------FENACHVFDTMPLRNLHSWTALLRVYIEMGFFEEA 133
Query: 232 ISFFRRM---GMEVSDN--IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSF 286
F ++ G+ V + + P + + C L A+ +LG+ +HG ++ D+ S
Sbjct: 134 FFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCAV------ELGRQMHGMALKHDGDMKSA 187
Query: 287 IS-------------NALIDMYGKCGSLKEARRAFDR----NSKKRLTSWNSMINSFALH 329
NA+I Y + G+L +A+ FDR +K SWNSMI+ +
Sbjct: 188 FEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDG 247
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
+ + +F ++++ I PD T S+L C + +G+ L ++
Sbjct: 248 SLFDEAYSLFRDLLK---EGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAI-VRGLQSN 303
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAE 442
G LV++ + A G+ E D W +L++G Y R + AE
Sbjct: 304 SIVGGALVEMYSKCQDIVAAQMAFDGVS-ERDLPTWNALISG---YARCNQAE 352
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 100/235 (42%), Gaps = 25/235 (10%)
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P+ T L + G LGK +H + ++G + F++ L+ MY + S + A
Sbjct: 49 PSSTTYASILDSCGSP---ILGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHV 105
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FD + L SW +++ + G E + +FE+++ + +R D F +L C
Sbjct: 106 FDTMPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLY-EGVRVRLDFFVFPVVLKICCGL 164
Query: 368 GLVEQGR--------------AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
VE GR + F++ ++ R Y ++ G +A E+
Sbjct: 165 CAVELGRQMHGMALKHDGDMKSAFEMFSRFSR--KSAASYNAMIAGYWENGNLFKAKELF 222
Query: 414 KGMK---IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGYGIMLA 463
M+ ++ D + W S+++G D A + L++ I+P++ G +LA
Sbjct: 223 DRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLA 277
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 84/208 (40%), Gaps = 36/208 (17%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+LA R I KQ+ ++ G LV K ++ + +++ ++ P
Sbjct: 411 ILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALVDMYA-KCGDVKHCYRVYNMISNP 469
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
N + AM+TAYA H +L+R M+ + +P+ + VL SC
Sbjct: 470 NLVSHNAMLTAYAMH-GHGEEGIALFRRML-ASKVRPDHVTFLAVLSSC----------- 516
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
VH ++ G E AL+ +Y+ ++ +T M+ +R G
Sbjct: 517 VHAGSLEIGHEC-----LALMVAYNVM----------------PSLKHYTCMVDLLSRAG 555
Query: 196 DIKNAASLFDSMP-DRDVPAWNSVIAGC 222
+ A L ++P + D WN+++ GC
Sbjct: 556 QLYEAYELIKNLPTEADAVTWNALLGGC 583
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 177/508 (34%), Positives = 264/508 (51%), Gaps = 53/508 (10%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A +FD L + + +MI+ Y S +Y+ M+ G I VL C
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSN-GLTERGLEIYKQMMYLGIDVDLATIIS-VLVGC 261
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ K VH+ +KS FE+ L++ YS+ G D+ A ++F++M +RNVVSW
Sbjct: 262 ANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCG-DLDGALRVFEKMGERNVVSW 320
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDR----DVPAWNSVIAGCTQNGLFSDA--------- 231
T+MI+GYTR G A L M DV A S++ C ++G +
Sbjct: 321 TSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKA 380
Query: 232 -------------ISFFRRMG-----------MEVSD---------NIRPNQVTLVCALS 258
+ + + G M V D ++P+ T+ C L
Sbjct: 381 NNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILP 440
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
A L+ GK IHGY+ RNG D ++NAL+D+Y KCG L AR FD K L S
Sbjct: 441 ACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVS 500
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
W MI+ + +HG +I F EM +D I PD V+FIS+L AC+H GL+EQG +F
Sbjct: 501 WTVMISGYGMHGYGNEAIATFNEM---RDAGIEPDEVSFISILYACSHSGLLEQGWRFFY 557
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
+M + IEP++EHY C+VDLL R G +A E ++ + I PD +WG+LL GC+IY
Sbjct: 558 IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDI 617
Query: 439 DFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV 498
+ AE +++ E++P N GY ++LANIY E KW+EV+++R+ + + K PGCSWIE+
Sbjct: 618 ELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEI 677
Query: 499 DKQVHQFHSL-DKTHPRTEEIYDALESM 525
+V+ F S + +HP +++I L+ M
Sbjct: 678 KGKVNLFVSGNNSSHPHSKKIESLLKKM 705
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 165/345 (47%), Gaps = 35/345 (10%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
Y VL+ C K VH+ I + V+ LV+ Y+ G D+ R++FD M
Sbjct: 102 YSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCG-DLKEGRRVFDTM 160
Query: 177 SDRNVVSWTAMISGYTRVGDIK--------------------NAASLFDSMPDRDVPAWN 216
+NV W M+S Y ++GD K +A+ LFD + DRDV +WN
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWN 220
Query: 217 SVIAGCTQNGLFSDAISFFRRM---GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH 273
S+I+G NGL + +++M G++V + T++ L ++G L LGK +H
Sbjct: 221 SMISGYVSNGLTERGLEIYKQMMYLGIDV------DLATIISVLVGCANSGTLSLGKAVH 274
Query: 274 GYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSE 333
++ + SN L+DMY KCG L A R F++ ++ + SW SMI + G+S+
Sbjct: 275 SLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSD 334
Query: 334 NSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
+I + ++M + ++ D V S+L+AC G ++ G+ + K +E +
Sbjct: 335 GAIRLLQQM---EKEGVKLDVVATTSILHACARSGSLDNGKDVHDYI-KANNMESNLFVC 390
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
L+D+ + G + A V M ++ D + W +++ K RT
Sbjct: 391 NALMDMYTKCGSMDGANSVFSTMVVK-DIISWNTMIGELKPDSRT 434
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 118/312 (37%), Gaps = 86/312 (27%)
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
DR V + A I + ++G+++NA L + C ++ L + S
Sbjct: 63 DRQVTDYNAKILHFCQLGNLENAMEL---------------VCMCQKSELETKTYS---- 103
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
V +CA S L GK +H + N + +D + L+ +Y
Sbjct: 104 ------------SVLQLCAGSK-----SLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYAT 146
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP----- 352
CG LKE RR FD KK + WN M++ +A G + SIC+F+ M+ RP
Sbjct: 147 CGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASE 206
Query: 353 -------------------------------------------DGVTFISLLNACTHGGL 369
D T IS+L C + G
Sbjct: 207 LFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGT 266
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
+ G+A L K+ E +I L+D+ + G + AL V + M E + V W S++
Sbjct: 267 LSLGKAVHSLAIKS-TFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMI 324
Query: 430 NGCKIYGRTDFA 441
G GR+D A
Sbjct: 325 AGYTRDGRSDGA 336
>gi|356544269|ref|XP_003540576.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 522
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 179/521 (34%), Positives = 289/521 (55%), Gaps = 32/521 (6%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
V+ +LE+C+ + +KQ+ T G ++ F + KL+ F S+L YA +F H+ P
Sbjct: 7 VVGLLEQCSSMREMKQIHGHAITHGLARFAFISSKLLAF--YARSDLRYAHTLFSHIPFP 64
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
N + Y +ITA++ H SS F + + PN + +L
Sbjct: 65 NLFDYNTIITAFS---PHYSSLFFI---QMLNAAVSPNSRTFSLLLSK--SSPSLPFLHQ 116
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+H+ I++ G V T+L+ +YS G+ AR+LFD+ +NV WT++++GY G
Sbjct: 117 LHSHIIRRGHVSDFYVITSLLAAYSNHGSTRA-ARRLFDQSPYKNVACWTSLVTGYCNNG 175
Query: 196 DIKNAASLFDSMPDR---DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD-NIRPNQV 251
+ +A +LFD++P+R DV +++++++G +NG F + I FR E+ D N++PN
Sbjct: 176 LVNDARNLFDAIPERERNDV-SYSAMVSGYVKNGCFREGIQLFR----ELKDRNVKPNNS 230
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNG----LDLDSFISNALIDMYGKCGSLKEARRA 307
L LSA G + GK IH YV +N +L+ + ALID Y KCG ++ A+R
Sbjct: 231 LLASVLSACASVGAFEEGKWIHAYVDQNKSQCYYELE--LGTALIDFYTKCGCVEPAQRV 288
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F K + +W++M+ A++ +++ ++ +FEEM + RP+ VTFI +L AC H
Sbjct: 289 FGNMKTKDVAAWSAMVLGLAINAKNQEALELFEEMEKVGP---RPNAVTFIGVLTACNHK 345
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
L + F M+ Y I IEHYGC+VD+L R+G+ EEALE +K M++EPD V+WGS
Sbjct: 346 DLFGEALKLFGYMSDKYGIVASIEHYGCVVDVLARSGKIEEALEFIKSMEVEPDGVIWGS 405
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LLNGC ++ + K L+E++P +GG ++L+N+Y +GKW+ V + RK +KDR
Sbjct: 406 LLNGCFLHNNIELGHKVGKYLVELEPGHGGRYVLLSNVYATMGKWEAVLETRKFMKDRGV 465
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTH---PRTEEIYDALESM 525
G S+IE+ + VH+F D H E+Y L +
Sbjct: 466 PAVSGSSFIEIHQTVHKFLVHDNNHHCGSYPAEVYRVLNHL 506
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 186/582 (31%), Positives = 294/582 (50%), Gaps = 74/582 (12%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
Q L ++ L L +C++++ + Q+ + + Q F A KL+ +L +L A +F
Sbjct: 18 QRLLEEKLCDLHKCSNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSL-CRHLASAVNVF 76
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
+H+ PN +LY ++I A+A +H S F+ + M + G P+ F YP +LK+C
Sbjct: 77 NHVPHPNVHLYNSIIRAHAHNTSHPSLPFNAFFQMQKNGL-FPDNFTYPFLLKACTGPSS 135
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN-DIGIARKLFDEMSDRNVVSWTAMI 188
+M+H + K GF V +L++SYSR G+ + A LF M +R+VV+W +MI
Sbjct: 136 LPLVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMI 195
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
G R G+++ A LFD MP+RD+ +WN+++ G + G A F RM NI
Sbjct: 196 GGLVRCGELEGACKLFDEMPERDMVSWNTMLDGYAKAGEMDRAFELFERMPQR---NIV- 251
Query: 249 NQVTLVCALSAIGHTGMLQL-------------GKVIHGYVYRN---------------G 280
+ T+VC S G M ++ +I GY + G
Sbjct: 252 SWSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAG 311
Query: 281 LDLDSFISNALIDMYGKCGSLKEARR--------------------------------AF 308
L D +++ + G L +R AF
Sbjct: 312 LRPDDGFLISILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAF 371
Query: 309 DRNS----KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
D S KK + SWNSMI FA+HG E ++ +F M+ PD TF+ LL AC
Sbjct: 372 DVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMV---PEGFEPDTYTFVGLLCAC 428
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
TH GLV +GR YF M K Y I PQ+EHYGC++DLLGR G +EA +++ M +EP+ ++
Sbjct: 429 THAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAII 488
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
G+LLN C+++ DFA ++L +++P + G +L+NIY + G W V VR + +
Sbjct: 489 LGTLLNACRMHNDVDFARAVCEQLFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMN 548
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K G S IEV+++VH+F D++HP++++IY ++ +V
Sbjct: 549 TGGQKPSGASSIEVEEEVHEFTVFDQSHPKSDDIYKMIDRLV 590
>gi|357143748|ref|XP_003573036.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Brachypodium distachyon]
Length = 484
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 163/416 (39%), Positives = 240/416 (57%), Gaps = 10/416 (2%)
Query: 110 PQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP---VVETALVNSYSRSGNDI 166
P PN VL +C S + + + + +P ++ T L Y S
Sbjct: 64 PPPNDVTLLTVLSACAGDSSSALARPLALSLHALAVKLFPCNLLLCTCLARFYLAS-RLP 122
Query: 167 GIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNG 226
+A KLFD M DR+VV++ MI+G R G + A +FD MP D +W ++I GC +NG
Sbjct: 123 HLAIKLFDSMPDRSVVTYNTMITGLMRNGLVAAAREVFDEMPAPDKVSWTALIDGCVKNG 182
Query: 227 LFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSF 286
+AI F M + D + P+ VTLV A+SA G L LG +H +V L+ +
Sbjct: 183 RHDEAIDCFHSM---LRDGVEPDYVTLVAAISACAEVGALGLGMWVHRFVVDKRLEHNVR 239
Query: 287 ISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQ 346
++N+LIDMY +CG + AR+ F R K+ + SWNSMI FA +GQ +++ FE M R
Sbjct: 240 VANSLIDMYARCGQVDFARQVFGRIRKRTVVSWNSMIVGFAANGQYADAVEHFEAMRR-- 297
Query: 347 DHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRF 406
+PD VTF +L AC+H GL ++G Y+ M + I ++EHYGC+VDLLGRAGR
Sbjct: 298 -EGFKPDTVTFTGVLTACSHAGLTDEGLRYYDAMRTEHGIAARMEHYGCVVDLLGRAGRL 356
Query: 407 EEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIY 466
EA+ VV+ M + P+EVV G+LL GC+++G D AE ++ L+E DP ++L+NIY
Sbjct: 357 GEAMRVVESMPMRPNEVVLGALLAGCRMHGDVDLAEQLMQHLLEQDPGGDSNYVLLSNIY 416
Query: 467 GELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+GKW KVR ++K R K PG S +E+D +VH+F D++HP+ E+++ L
Sbjct: 417 AAVGKWGGAGKVRSLMKSRGVKKRPGQSTVEIDGEVHEFVCGDRSHPQAREVFEVL 472
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 101/255 (39%), Gaps = 50/255 (19%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
+ AR +FD + P+ +TA+I H A + M+R G +P+ +
Sbjct: 153 VAAAREVFDEMPAPDKVSWTALIDGCVKNGRH-DEAIDCFHSMLRDGV-EPDYVTLVAAI 210
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+C +V VH +V E V +L++ Y+R G + AR++F + R V
Sbjct: 211 SACAEVGALGLGMWVHRFVVDKRLEHNVRVANSLIDMYARCGQ-VDFARQVFGRIRKRTV 269
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
VSW +MI G+ NG ++DA+ F M E
Sbjct: 270 VSWNSMIVGF-------------------------------AANGQYADAVEHFEAMRRE 298
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLG-------KVIHGYVYRNGLDLDSFISNALIDM 294
+P+ VT L+A H G+ G + HG R ++ + ++D+
Sbjct: 299 ---GFKPDTVTFTGVLTACSHAGLTDEGLRYYDAMRTEHGIAAR----MEHY--GCVVDL 349
Query: 295 YGKCGSLKEARRAFD 309
G+ G L EA R +
Sbjct: 350 LGRAGRLGEAMRVVE 364
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 104/269 (38%), Gaps = 42/269 (15%)
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
++A S +P RDV +W S IA + G A + M + PN VTL+ L
Sbjct: 17 RSATSKPRRLPPRDVVSWTSAIARPAREGDLQGAAAALSAMLSSPAAP-PPNDVTLLTVL 75
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDL----------------------------DSFIS- 288
SA L + + ++ + L DS
Sbjct: 76 SACAGDSSSALARPLALSLHALAVKLFPCNLLLCTCLARFYLASRLPHLAIKLFDSMPDR 135
Query: 289 -----NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
N +I + G + AR FD SW ++I+ +G+ + +I F M+
Sbjct: 136 SVVTYNTMITGLMRNGLVAAAREVFDEMPAPDKVSWTALIDGCVKNGRHDEAIDCFHSML 195
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
R + PD VT ++ ++AC G + G + + R+E + L+D+ R
Sbjct: 196 R---DGVEPDYVTLVAAISACAEVGALGLGMWVHRFVVDK-RLEHNVRVANSLIDMYARC 251
Query: 404 GRFEEALEVVKGMKIEPDEVV-WGSLLNG 431
G+ + A +V +I VV W S++ G
Sbjct: 252 GQVDFARQVFG--RIRKRTVVSWNSMIVG 278
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 160/457 (35%), Positives = 258/457 (56%), Gaps = 42/457 (9%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ +FD + + + AMI+ YA + + A L++DM++ +P++ V+ +C
Sbjct: 176 AQKMFDEIPVKDVVSWNAMISGYA-ETGNYKEALELFKDMMKT-NVRPDESTMVTVVSAC 233
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ VH+ I GF G+++ I L D
Sbjct: 234 AQSGSIELGRQVHSWIDDHGF-----------------GSNLKIVNALIDL--------- 267
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
Y++ G+++ A LF+ +P +DV +WN++I G T L+ +A+ F+ M +
Sbjct: 268 ------YSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM---LRS 318
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR--NGLDLDSFISNALIDMYGKCGSLK 302
PN VT++ L A H G + +G+ IH Y+ + G+ S + +LIDMY KCG ++
Sbjct: 319 GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIE 378
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
A + F+ K L+SWN+MI FA+HG+++ S +F M + + I PD +TF+ LL+
Sbjct: 379 AAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRK---NGIEPDDITFVGLLS 435
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H G+++ GR F+ MT+ Y++ P++EHYGC++DLLG +G F+EA E++ M++EPD
Sbjct: 436 ACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDG 495
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
V+W SLL CK++G + E + LI+I+P N G ++L+NIY G+W+EV R +L
Sbjct: 496 VIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALL 555
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
D+ K PGCS IE+D VH+F DK HPR EIY
Sbjct: 556 NDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 592
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 231/437 (52%), Gaps = 19/437 (4%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFDHLTTPNTYLYTAM 83
+ L+ + + + G TN+ KL+ FC L L YA +F+ + PN ++ M
Sbjct: 3 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTM 62
Query: 84 ITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIV 141
+A S P SA LY M+ G PN + +P +LKSC + + +H ++
Sbjct: 63 FRGHALSSDPV---SALKLYVCMISLGL-LPNSYTFPFLLKSCAKSKAFKEGQQIHGHVL 118
Query: 142 KSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAA 201
K G + V T+L++ Y ++G + A K+FDE R+VVS+TA+I GY G I+NA
Sbjct: 119 KLGCDLDLYVHTSLISMYVQNGR-LEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQ 177
Query: 202 SLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIG 261
+FD +P +DV +WN++I+G + G + +A+ F+ M + N+RP++ T+V +SA
Sbjct: 178 KMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM---MKTNVRPDESTMVTVVSACA 234
Query: 262 HTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNS 321
+G ++LG+ +H ++ +G + I NALID+Y KCG L+ A F+ K + SWN+
Sbjct: 235 QSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNT 294
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
+I + + ++ +F+EM+R + P+ VT +S+L AC H G ++ GR +
Sbjct: 295 LIGGYTHMNLYKEALLLFQEMLRSGE---TPNDVTMLSILPACAHLGAIDIGRWIHVYID 351
Query: 382 KTYR-IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD- 439
K + + L+D+ + G E A +V + + W +++ G ++GR D
Sbjct: 352 KRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADA 410
Query: 440 -FAEFAVKKLIEIDPNN 455
F F+ + I+P++
Sbjct: 411 SFDIFSRMRKNGIEPDD 427
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 162/475 (34%), Positives = 265/475 (55%), Gaps = 13/475 (2%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
++ ++ AR +F+ + ++ AMI+ Y Q + AF L+R MV P ++F
Sbjct: 243 VRRGDVNAARSVFEEVDGKFDVVWNAMISGYV-QSGMCADAFELFRRMVSEKVPL-DEFT 300
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKL 172
+ VL +C + K VH QI++ P V ALV YS+ G I IA+++
Sbjct: 301 FTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGK-IVIAKRI 359
Query: 173 FDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAI 232
FD M+ ++VVSW ++SGY G + A +F MP ++ +W +++G GL DA+
Sbjct: 360 FDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDAL 419
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALI 292
F +M E +++P T A++A G G L+ G+ +H ++ + G + + NAL+
Sbjct: 420 KLFNQMRAE---DVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALL 476
Query: 293 DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
MY KCG++ +AR F SWN+MI++ HG ++ +F++M+ I P
Sbjct: 477 TMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVA---EGIDP 533
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
D ++F+++L AC H GLV++G YF+ M + + I P +HY L+DLLGR+GR EA ++
Sbjct: 534 DRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDL 593
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKW 472
+K M EP +W ++L+GC+ G +F +A +L + P + G I+L+N Y G+W
Sbjct: 594 IKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRW 653
Query: 473 DEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+ +VRK+++DR K PGCSWIEV ++H F D HP +E+Y LE + A
Sbjct: 654 VDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGA 708
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 220/481 (45%), Gaps = 81/481 (16%)
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV--LESRGT 133
+T L+ AM++A+A + + A+ A S++ ++ G +P+ + + ++ + + L +
Sbjct: 124 DTVLHNAMMSAFA-RASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHC 182
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGI--ARKLFDEMSDRNVVSWTAMISGY 191
+H ++KSG V AL+ Y + ARK+ DEM D++ ++WT M+ GY
Sbjct: 183 TQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGY 242
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
R GD+ A S+F+ + + WN++I+G Q+G+ +DA FRRM VS+ + ++
Sbjct: 243 VRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRM---VSEKVPLDEF 299
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYR---NGLDLDSF-ISNALIDMYGKCGSLKEARRA 307
T LSA + G GK +HG + R N + + ++NAL+ +Y K G + A+R
Sbjct: 300 TFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRI 359
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM------------------------- 342
FD + K + SWN++++ + G + ++ VF+ M
Sbjct: 360 FDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDAL 419
Query: 343 -----MRCQDHNIRPDGVTFISLLNACTHGGLVEQGR-------------------AYFK 378
MR +D ++P T+ + AC G ++ GR A
Sbjct: 420 KLFNQMRAED--VKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLT 477
Query: 379 LMTK---------TYRIEPQIE--HYGCLVDLLGRAGRFEEALEVVKGM---KIEPDEVV 424
+ K + + P ++ + ++ LG+ G EALE+ M I+PD +
Sbjct: 478 MYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRIS 537
Query: 425 WGSLLNGCKIYGRTD--FAEF-AVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
+ ++L C G D F F ++K+ I P Y L ++ G G+ E R + K
Sbjct: 538 FLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA-RLIDLLGRSGRIGEARDLIKT 596
Query: 482 L 482
+
Sbjct: 597 M 597
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 148/349 (42%), Positives = 228/349 (65%), Gaps = 6/349 (1%)
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
+VV A++ Y ++G + +A +F+ +P +DV +WN++I G QNGL S+AI ++ M
Sbjct: 451 EDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMM 510
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
E I PNQ T V L A H G LQ G IHG V + L LD F++ LID+YGKC
Sbjct: 511 --EECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKC 568
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G L +A F + ++ +WN++I+ +HG +E ++ +F EM+ D ++PD VTF+
Sbjct: 569 GRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEML---DEGVKPDHVTFV 625
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
SLL+AC+H G VE+G+ F+LM + Y I+P ++HYGC+VDLLGRAG E A + +K M +
Sbjct: 626 SLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPL 684
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
+PD +WG+LL C+I+G + +FA +L E+D N GY ++L+NIY +GKW+ V KV
Sbjct: 685 QPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKV 744
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
R + ++R KTPG S IEV+++V F++ +++HP+ +EIY+ L + A
Sbjct: 745 RSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTA 793
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 218/455 (47%), Gaps = 54/455 (11%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
K L + L G+ Q+ F + +LV L +++ +R FD + + Y + +MI+AY
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYA-NLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
H A + ++ + +P+ + +P VLK+C +++ R +H K GF+
Sbjct: 195 N-GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGR---KIHCWAFKLGFQWNV 250
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
V +L++ YSR G GIAR SLFD MP
Sbjct: 251 FVAASLIHMYSRFGF-TGIAR-------------------------------SLFDDMPF 278
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
RD+ +WN++I+G QNG + A+ M +E I+ N VT+V L G +
Sbjct: 279 RDMGSWNAMISGLIQNGNAAQALDVLDEMRLE---GIKMNFVTVVSILPVCPQLGDISTA 335
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
+IH YV ++GL+ D F+SNALI+MY K G+L++AR+AF + + SWNS+I A +
Sbjct: 336 MLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSII---AAY 392
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
Q+++ + ++ Q + +PD +T +SL + + R+ + + +
Sbjct: 393 EQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMED 452
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK--K 447
+ +VD+ + G + A +V + + ++ D + W +L+ G Y + A A++ K
Sbjct: 453 VVIGNAVVDMYAKLGLLDSAHKVFEIIPVK-DVISWNTLITG---YAQNGLASEAIEVYK 508
Query: 448 LI----EIDPNNGGYGIMLANIYGELGKWDEVRKV 478
++ EI PN G + + + Y +G + K+
Sbjct: 509 MMEECKEIIPNQGTW-VSILPAYAHVGALQQGMKI 542
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 275/509 (54%), Gaps = 67/509 (13%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYL 79
L+ C+ + LKQ S + LG S N ++++FC + S Y R+ L ++
Sbjct: 27 LDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSG--YLRW---QLARNCIFM 81
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
Y+ M+ S PN+F YP ++++C K +H
Sbjct: 82 YSRMLHKSVS----------------------PNKFTYPPLIRACCIDYAIEEGKQIHAH 119
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
++K GF G D S +I Y ++
Sbjct: 120 VLKFGF-----------------GAD---------------GFSLNNLIHMYVNFQSLEQ 147
Query: 200 AASLFDSMP--DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
A +FD+MP DR+ +WN++IA Q+ +A + F RM +E N+ ++ L
Sbjct: 148 ARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLE---NVVLDKFVAASML 204
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
SA G L+ GK IHGY+ ++G++LDS ++ +IDMY KCG L++A F+ +K ++
Sbjct: 205 SACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGIS 264
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
SWN MI A+HG+ E +I +F+EM R + PDG+TF+++L+AC H GLVE+G+ YF
Sbjct: 265 SWNCMIGGLAMHGKGEAAIELFKEMER---EMVAPDGITFVNVLSACAHSGLVEEGKHYF 321
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
+ MT+ ++P +EH+GC+VDLLGRAG EEA +++ M + PD V G+L+ C+I+G
Sbjct: 322 QYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGN 381
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
T+ E KK+IE++P+N G ++LAN+Y G+W++V KVRK++ DR K PG S IE
Sbjct: 382 TELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIE 441
Query: 498 VDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+ V +F + + HP+ +EIY L+ ++
Sbjct: 442 SESGVDEFIAGGRAHPQAKEIYAKLDEIL 470
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 160/451 (35%), Positives = 256/451 (56%), Gaps = 13/451 (2%)
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
+ AMI+ YA + + AF ++R M+ + Q ++F + V+ C + R K +H
Sbjct: 257 WNAMISGYAHRGLYLE-AFEMFRKMIM-SKIQLDEFTFTSVISVCANAGCFRLGKEMHAY 314
Query: 140 IVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+K+ P V AL+ Y + G + IA+++F++M +R++VSW ++SGY V
Sbjct: 315 FLKTVANPAPDVAMPVNNALITFYWKCGK-VDIAQEIFNKMPERDLVSWNIILSGYVNVR 373
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
+ A S F+ MP++++ +W +I+G Q G +A+ FF RM ++ P
Sbjct: 374 CMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQ---GFEPCDYAFAG 430
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
A+ + G L+ G+ +H V R G + NALI MY +CG + A F
Sbjct: 431 AIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVD 490
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
SWN+MI + HGQ +I +FEEM++ I PD ++F+++++AC+H GLV++GR
Sbjct: 491 AISWNAMIAALGQHGQGTQAIELFEEMLK---EGILPDRISFLTVISACSHAGLVKEGRK 547
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
YF M Y + P EHY ++DLL RAG+F EA EV++ M EP +W +LL GC+I+
Sbjct: 548 YFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIH 607
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
G D A ++L E+ P + G ++L+N+Y G+W+++ KVRK+++DR K PGCSW
Sbjct: 608 GNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSW 667
Query: 496 IEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
IEV+ +VH F D HP +IY+ LE +V
Sbjct: 668 IEVENKVHSFLVGDANHPEVRQIYNYLEQLV 698
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 171/377 (45%), Gaps = 59/377 (15%)
Query: 58 KLSNLTYARFIFDHLTTPN---------------------------------TYLYTAMI 84
K S L YAR++FD + P+ + Y AMI
Sbjct: 60 KSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMI 119
Query: 85 TAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE-SRGTKMVHTQIVKS 143
TAY S +A L+ DM +R +P+ + + VL + V E + + +H +VKS
Sbjct: 120 TAY-SHNHDGHAAIELFCDM-QRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKS 177
Query: 144 GFEQYPVVETALVNSYSRSGND--------IGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
G V AL++SY + + ARKLFDEM +R+ +SWT +I+GY +
Sbjct: 178 GTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNN 237
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
D+ A + + AWN++I+G GL+ +A FR+M M I+ ++ T
Sbjct: 238 DLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIM---SKIQLDEFTFTS 294
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRN----GLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
+S + G +LGK +H Y + D+ ++NALI Y KCG + A+ F++
Sbjct: 295 VISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKM 354
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
++ L SWN +++ + + + F EM + NI +++I +++ G E
Sbjct: 355 PERDLVSWNIILSGYVNVRCMDEAKSFFNEM---PEKNI----LSWIIMISGLAQIGFAE 407
Query: 372 QGRAYFKLMTKTYRIEP 388
+ +F M K EP
Sbjct: 408 EALKFFNRM-KLQGFEP 423
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 155/365 (42%), Gaps = 59/365 (16%)
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
VH ++ SGF+ + L++ YS+S + + AR LFDE+ ++V+ T +I+ Y+ G
Sbjct: 35 VHAHMIASGFQPRGHILNRLIDIYSKS-SKLNYARYLFDEIPQPDIVARTTLIAAYSAAG 93
Query: 196 DIKNAASLFDSMP--DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
D+K + +F P RD +N++I + N AI F M DN RP+ T
Sbjct: 94 DLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQ---RDNFRPDNYTF 150
Query: 254 VCALSAIGHTGMLQL-GKVIHGYVYRNGLDLDSFISNALIDMYGKCGS---------LKE 303
L A+ + + +H V ++G + + NALI Y KC + + E
Sbjct: 151 TSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAE 210
Query: 304 ARRAFDR-------------------------------NSKKRLTSWNSMINSFALHGQS 332
AR+ FD SKK +WN+MI+ +A G
Sbjct: 211 ARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLY 270
Query: 333 ENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR---AYFKLMTKTYRIEPQ 389
+ +F +M+ + I+ D TF S+++ C + G G+ AYF +
Sbjct: 271 LEAFEMFRKMIMSK---IQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVA 327
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG-----CKIYGRTDFAEFA 444
+ L+ + G+ + A E+ M E D V W +L+G C ++ F E
Sbjct: 328 MPVNNALITFYWKCGKVDIAQEIFNKMP-ERDLVSWNIILSGYVNVRCMDEAKSFFNEMP 386
Query: 445 VKKLI 449
K ++
Sbjct: 387 EKNIL 391
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 46/163 (28%)
Query: 240 MEVSDNIRP------NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
M D+IR + + + C S I ++ L + +H ++ +G I N LID
Sbjct: 1 MTTPDSIRTAANRYGSLLQICCLQSPISYS----LARPVHAHMIASGFQPRGHILNRLID 56
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTS---------------------------------WN 320
+Y K L AR FD + + + +N
Sbjct: 57 IYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYN 116
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
+MI +++ + +I +F +M R N RPD TF S+L A
Sbjct: 117 AMITAYSHNHDGHAAIELFCDMQR---DNFRPDNYTFTSVLGA 156
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 162/475 (34%), Positives = 273/475 (57%), Gaps = 22/475 (4%)
Query: 56 TLKLSNLTYARFIFDHL----TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQ 111
L + + R + H+ + +T++ A+I AY S+ S A ++ +M R
Sbjct: 15 ALSAAGVAPVRAVHSHVVKLGSVEDTFVGNALIDAY-SKNGGFSDARKVFDEMPERDVVS 73
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
N + V + E G + + ++ E+ V +++ Y+++G ++ A +
Sbjct: 74 WNTAMAAMVREG-----ELAGVRKLFDEMP----EKDTVSWNTILDGYTKAG-EVEAAFE 123
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
LF M +RNVVSW+ M+SGY + GD++ A +FD MP +++ W +++ C Q GL +A
Sbjct: 124 LFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEA 183
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
F +M ++ + +V L+A +G L LGK IH YV + L + + NAL
Sbjct: 184 GKLFAQMK---EASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNAL 240
Query: 292 IDMYGKCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
IDM+ KCG + A FD + +K SWNS+I FA+HG + ++ +F +M +
Sbjct: 241 IDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQM---KQQGF 297
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
PD VT I++L+ACTH G V++GR +F M + Y I PQIEHYGC++DLLGR G +EA+
Sbjct: 298 NPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAV 357
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELG 470
+++K M EP+EV+WGSLL+ C+++ ++AE AV +L ++ P+N G +L+NIY E G
Sbjct: 358 DLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAG 417
Query: 471 KWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+W ++ K R +K + KT G SW+E+++ H+F D+ H +++I + ++ +
Sbjct: 418 QWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRL 472
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 20/236 (8%)
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
L+ ALSA G + + +H +V + G D+F+ NALID Y K G +AR+ FD
Sbjct: 12 LIKALSAAGVAPV----RAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMP 67
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
++ + SWN+ + + G+ +F+EM D V++ ++L+ T G VE
Sbjct: 68 ERDVVSWNTAMAAMVREGELAGVRKLFDEM-------PEKDTVSWNTILDGYTKAGEVEA 120
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
F+ M E + + +V + G E A + M + V W +++ C
Sbjct: 121 AFELFQRMP-----ERNVVSWSTMVSGYCKKGDLEMARVIFDKMP-SKNLVTWTIMVSAC 174
Query: 433 KIYGRTDFAE--FAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
G D A FA K ++ + +LA E G +++ + ++ RN
Sbjct: 175 AQKGLVDEAGKLFAQMKEASVELDVAAVVSILAAC-AESGSLSLGKRIHRYVRKRN 229
>gi|147769957|emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
Length = 476
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 166/480 (34%), Positives = 273/480 (56%), Gaps = 41/480 (8%)
Query: 21 ERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHLTTPNTYL 79
++C ++ LKQ+ + + + N+ A +L+ FC L S +L+YA +F++ PN+++
Sbjct: 36 DKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQEPNSFM 95
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
+ +I A+AS + S A LY DM RR P + +P +LK+C + + VHT
Sbjct: 96 WNTLIRAHASS-LNPSEALLLYVDM-RRLDVIPGKHTFPFLLKACSNFQSLQSCIQVHTH 153
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
++K G + V LV +YS S D+ AR++FDE+S+R++ WT MISGY
Sbjct: 154 VLKFGLDLNLHVVNGLVRAYSVSC-DVRNARRVFDEVSERSLSIWTTMISGY-------- 204
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
QN ++A+ F +M + + + PN TL LSA
Sbjct: 205 -----------------------AQNYCSNEALELFDQM---IVEGLEPNGATLASVLSA 238
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSW 319
+G L LG+ IH ++ G+++ + AL+ MY K G++ A++ FD S++ +W
Sbjct: 239 CAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKLFDXISERNTATW 298
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
N+MI A+HG ++ ++ + + + I P+ +TF+ +L+AC H GL+ GR F L
Sbjct: 299 NAMICGLAVHGHAKEAL---DRFWKLEKEQIVPNDITFVGVLSACCHAGLLSVGRKIFHL 355
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
M + Y IEP+IEHYGC+VDLLGR G EA E++KGM + D V+ G+LL CK +G +
Sbjct: 356 MKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAWKADVVILGALLGSCKNHGNIE 415
Query: 440 FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVD 499
AE VK+++ ++P+N G ++L+N+Y E G+W++V ++RK++K N KTPG S ++ D
Sbjct: 416 IAERVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRLRKVMKSGNLKKTPGWSLVDSD 475
>gi|225451435|ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 474
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 166/480 (34%), Positives = 273/480 (56%), Gaps = 41/480 (8%)
Query: 21 ERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHLTTPNTYL 79
++C ++ LKQ+ + + + N+ A +L+ FC L S +L+YA +F++ PN+++
Sbjct: 34 DKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQEPNSFM 93
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
+ +I A+AS + S A LY DM RR P + +P +LK+C + + VHT
Sbjct: 94 WNTLIRAHASS-LNPSEALLLYVDM-RRLDVIPGKHTFPFLLKACSNFQSLQSCIQVHTH 151
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
++K G + V LV +YS S D+ AR++FDE+S+R++ WT MISGY
Sbjct: 152 VLKFGLDLNLHVVNGLVRAYSVSC-DVRNARRVFDEVSERSLSIWTTMISGY-------- 202
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
QN ++A+ F +M + + + PN TL LSA
Sbjct: 203 -----------------------AQNYCSNEALELFDQM---IVEGLEPNGATLASVLSA 236
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSW 319
+G L LG+ IH ++ G+++ + AL+ MY K G++ A++ FD S++ +W
Sbjct: 237 CAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKLFDTISERNTATW 296
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
N+MI A+HG ++ ++ + + + I P+ +TF+ +L+AC H GL+ GR F L
Sbjct: 297 NAMICGLAVHGHAKEAL---DRFWKLEKEQIVPNDITFVGVLSACCHAGLLSVGRKIFHL 353
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
M + Y IEP+IEHYGC+VDLLGR G EA E++KGM + D V+ G+LL CK +G +
Sbjct: 354 MKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAWKADVVILGALLGSCKNHGNIE 413
Query: 440 FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVD 499
AE VK+++ ++P+N G ++L+N+Y E G+W++V ++RK++K N KTPG S ++ D
Sbjct: 414 IAERVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRLRKVMKSGNLKKTPGWSLVDSD 473
>gi|91806359|gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 286/547 (52%), Gaps = 71/547 (12%)
Query: 43 QTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT-PNTYLYTAMITAYASQPAHASSAFSLY 101
+TN F + + YAR +FD +++L +MI AY + S F+LY
Sbjct: 7 ETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDS-FALY 65
Query: 102 RDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQI--------------------- 140
RD+ + P+ F + + KSC + +H+QI
Sbjct: 66 RDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAK 125
Query: 141 ------VKSGFEQYP----VVETALVNSYSRSGN-------------------------- 164
++ F++ P V TAL++ Y R G
Sbjct: 126 FGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDG 185
Query: 165 -----DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVI 219
D+ AR+LFDEM+ + V++WT MI GY + DI A LFD+MP+R++ +WN++I
Sbjct: 186 FVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMI 245
Query: 220 AGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN 279
G QN + I+ F+ M + + ++ P+ VT++ L AI TG L LG+ H +V R
Sbjct: 246 GGYCQNKQPQEGITLFQEM--QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRK 303
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
LD + A++DMY KCG +++A+R FD +K++ SWN+MI+ +AL+G + ++ +F
Sbjct: 304 KLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLF 363
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
MM + +PD +T ++++ AC HGGLVE+GR +F +M + + +IEHYGC+VDL
Sbjct: 364 VTMMIEE----KPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDL 418
Query: 400 LGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYG 459
LGRAG +EA +++ M EP+ ++ S L+ C Y + AE +KK +E++P N G
Sbjct: 419 LGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNY 478
Query: 460 IMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
++L N+Y +WD+ V+ +++ A K GCS IE++ V +F S D THP I+
Sbjct: 479 VLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIH 538
Query: 520 DALESMV 526
L ++
Sbjct: 539 LVLGDLL 545
>gi|125539877|gb|EAY86272.1| hypothetical protein OsI_07642 [Oryza sativa Indica Group]
Length = 596
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 259/461 (56%), Gaps = 20/461 (4%)
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVR-RGQPQP----NQFIYPHVLKSCPDVLES 130
N Y +I++ A S A ++ + R RG Q ++F +C + ++
Sbjct: 128 NVVSYNTVISSLARH-GRESEALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDA 186
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
R + +H +V SG E ++ A+V++YS++G + AR LFD+M+ R+ VSWT+MI+G
Sbjct: 187 RHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGR-VEDARGLFDQMTIRDSVSWTSMIAG 245
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y R + +A +FD MP +D AW ++I+G QNG A+ F RM + + P
Sbjct: 246 YCRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERM---TGEGVVPTP 302
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSF---ISNALIDMYGKCGSLKEARRA 307
LV L A G++ GK +HG++ R + D F I NALIDMY KCG + A
Sbjct: 303 FALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAV 362
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FDR ++ + SWNSM+ F+ +GQ + S+ VFE M++ + ++P VTF+++L AC+H
Sbjct: 363 FDRMLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDE---VQPTYVTFLAVLTACSHA 419
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM--KIEPDEV-V 424
GLV GR + M + + +EP+ EHY +D LGR + EEA E +KG+ KI
Sbjct: 420 GLVSDGRRILESM-QDHGVEPRAEHYAAFIDALGRNHQLEEASEFIKGLSSKIGLGTTGS 478
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL C ++G + AE + L +++P N G +ML+NIY G+WD+ R+VR ++K
Sbjct: 479 WGALLGACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKG 538
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ K SWIEV + H F + D +H EIY+ L+ +
Sbjct: 539 KGLRKDQAYSWIEVQRAKHMFVADDTSHHEANEIYEMLDKL 579
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 132/311 (42%), Gaps = 63/311 (20%)
Query: 154 ALVNSYSRSGNDIGIARKLFDEM--SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRD 211
+L+ + +R + A +L D M + RNVVS+ +IS R G A +F + RD
Sbjct: 100 SLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLA-RD 158
Query: 212 VPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKV 271
R +G + + ++ T+V A SA + +
Sbjct: 159 ------------------------RGLGQQ---QVAIDRFTVVSAASACAGLRDARHLRE 191
Query: 272 IHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
+HG V +G+++ ++NA++D Y K G +++AR FD+ + + SW SMI +
Sbjct: 192 LHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGLFDQMTIRDSVSWTSMIAGYCRASM 251
Query: 332 SENSICVFEEMMRCQD-----------------------------HNIRPDGVTFISLLN 362
++++ VF +MM QD + P +S L
Sbjct: 252 LDDAVQVF-DMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLG 310
Query: 363 ACTHGGLVEQGR-AYFKLMTKTYRIEP-QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
AC GLV +G+ + ++ ++ +P + + L+D+ + G A+ V M +E
Sbjct: 311 ACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRM-LER 369
Query: 421 DEVVWGSLLNG 431
D + W S++ G
Sbjct: 370 DIISWNSMVTG 380
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 90/236 (38%), Gaps = 64/236 (27%)
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC-------------------- 298
AI + +LG +H + + L + +SN L+ +Y
Sbjct: 38 AISAGDVRRLGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLPHKNAHS 97
Query: 299 ------------GSLKEARRAFD--RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
G+L +A R D + + + S+N++I+S A HG+ ++ VF ++ R
Sbjct: 98 YNSLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLAR 157
Query: 345 CQ---DHNIRPDGVTFISLLNACT-----------HGGLVEQGRAYFKLMTKTYRIEPQI 390
+ + D T +S +AC HG +V G +M
Sbjct: 158 DRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMAN-------- 209
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
+VD +AGR E+A + M I D V W S++ G Y R + AV+
Sbjct: 210 ----AMVDAYSKAGRVEDARGLFDQMTIR-DSVSWTSMIAG---YCRASMLDDAVQ 257
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 157/455 (34%), Positives = 260/455 (57%), Gaps = 13/455 (2%)
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
PN + +++ + H A +++ M G P+Q VL S D +
Sbjct: 215 PNIVSWNGILSGFNRSGYH-KEAVIMFQKMHHLGFC-PDQVTVSSVLPSVGDSENLNMGR 272
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H ++K G + V +A+++ Y +SG+ GI KLFDE A I+G +R
Sbjct: 273 QIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGII-KLFDEFEMMETGVCNAYITGLSRN 331
Query: 195 GDIKNAASLFDSMPDR----DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
G + A +F ++ +V +W S+IAGC QNG +A+ FR M + ++PN+
Sbjct: 332 GLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVA---GVKPNR 388
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
VT+ L A G+ L G+ HG+ R L D + +ALIDMY KCG +K ++ F+
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNM 448
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
K L WNS++N +++HG+++ + +FE +MR + ++PD ++F SLL+AC GL
Sbjct: 449 MPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTR---LKPDFISFTSLLSACGQVGLT 505
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
++G YF +M++ Y I+P++EHY C+V+LLGRAG+ +EA +++K + EPD VWG+LLN
Sbjct: 506 DEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLN 565
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
C++ D AE A +KL ++P N G ++++NIY G W EV +R ++ K
Sbjct: 566 SCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKN 625
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PGCSWI+V +V+ + DK+HP+ ++I + ++ +
Sbjct: 626 PGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEI 660
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 219/467 (46%), Gaps = 55/467 (11%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A I + P Y ++++I A ++ S + ++ M G P+ + P++ K C
Sbjct: 69 ADLILQSIPDPTVYSFSSLIYAL-TKAKLFSQSIGVFSRMFSHGLI-PDTHVLPNLFKVC 126
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
++ + K +H SG + V+ +L + Y R G +G ARK+FD MS+++VV+
Sbjct: 127 AELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGR-MGDARKVFDRMSEKDVVTC 185
Query: 185 TAMISGYTRVGDIKNAASLFDSMP----DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
+A++ GY R G ++ + M + ++ +WN +++G ++G +A+ F++M
Sbjct: 186 SALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMH- 244
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
P+QVT+ L ++G + L +G+ IHGYV + GL D + +A++DMYGK G
Sbjct: 245 --HLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGH 302
Query: 301 LKEARRAFD------------------RNS-----------------KKRLTSWNSMINS 325
+ + FD RN + + SW S+I
Sbjct: 303 VYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAG 362
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
A +G+ ++ +F EM Q ++P+ VT S+L AC + + GR+ + +
Sbjct: 363 CAQNGKDIEALELFREM---QVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419
Query: 386 IEPQIEHYG-CLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
++ H G L+D+ + GR + + ++V M + V W SL+NG ++G+
Sbjct: 420 LDDV--HVGSALIDMYAKCGRIKMS-QIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSI 476
Query: 445 VKKLI--EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
+ L+ + P+ + +L+ G++G DE K M+ + K
Sbjct: 477 FESLMRTRLKPDFISFTSLLSAC-GQVGLTDEGWKYFNMMSEEYGIK 522
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 12/197 (6%)
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM---GMEVS 243
+I+ Y+ +A + S+PD V +++S+I T+ LFS +I F RM G+
Sbjct: 56 LIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPD 115
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
++ PN + LSA + GK IH +GLD+D+F+ +L MY +CG + +
Sbjct: 116 THVLPNLFKVCAELSA------FKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGD 169
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
AR+ FDR S+K + + ++++ +A G E + + EM + I P+ V++ +L+
Sbjct: 170 ARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEM---EKSGIEPNIVSWNGILSG 226
Query: 364 CTHGGLVEQGRAYFKLM 380
G ++ F+ M
Sbjct: 227 FNRSGYHKEAVIMFQKM 243
>gi|147860852|emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
Length = 562
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/409 (37%), Positives = 246/409 (60%), Gaps = 12/409 (2%)
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS-- 177
+L++C + R H +I+K G+ YP + T+LV++Y+ + + +A +L DEM
Sbjct: 65 ILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYAHC-DCLDLAHQLLDEMPYW 123
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
++++ +I+ +VG+ A +F M RDV WNS+I GC +N F +A+ FFR
Sbjct: 124 GFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFRE 183
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M ++ N+ P+ T ++ G +++HG + + L+ +S+ALID+Y K
Sbjct: 184 M---LNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSK 240
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG + A++ F+ ++ WNSMIN A+HG + ++I VF +M + ++ PD +TF
Sbjct: 241 CGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQM---EMESVSPDSITF 297
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
I +L AC+H GLVEQGR YF LM + Y I+PQ+EHYG +VDLLGRAG EEA ++K M
Sbjct: 298 IGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMP 357
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+EPD V+W +LL+ C+ + + E A+ K+ + N+G Y I+L+N+Y L KWD +
Sbjct: 358 MEPDIVIWRALLSACRNFKNPELGEVAIAKISHL--NSGDY-ILLSNMYCSLEKWDSAER 414
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
VR+M+K K G SW+E+ +HQF + D++HP T IY LE ++
Sbjct: 415 VREMMKRDGVRKNRGRSWVELGGVIHQFKAGDRSHPETGAIYKVLEGLI 463
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 112/251 (44%), Gaps = 42/251 (16%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K+ +A+ +F + + + +MI + A +R+M+ +P+ F
Sbjct: 138 MKVGEFDFAKRVFRKMLRRDVVTWNSMIGG-CVRNERFEEALRFFREMLN-SNVEPDGFT 195
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ V+ C + S ++VH +++ + ++ +AL++ YS+ G I A+K+F+ +
Sbjct: 196 FASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGR-INTAKKVFNSI 254
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+V W +MI+G +GL DAI F
Sbjct: 255 QHDDVSVWNSMINGL-------------------------------AIHGLALDAIGVFS 283
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN---GLDLDSFISNALID 293
+M ME ++ P+ +T + L+A H G+++ G+ + R+ L+ + A++D
Sbjct: 284 QMEME---SVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHY--GAMVD 338
Query: 294 MYGKCGSLKEA 304
+ G+ G ++EA
Sbjct: 339 LLGRAGLVEEA 349
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 165/471 (35%), Positives = 260/471 (55%), Gaps = 13/471 (2%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
++ ++ AR +F+ + ++ AMI+ Y A AF L+R MV P ++F
Sbjct: 239 VRRGDVGAARSVFEEVDGKFDVVWNAMISGYV-HSGMAVEAFELFRRMVLERVPL-DEFT 296
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKL 172
+ VL +C +V K VH QI++ P V ALV YS+ GN I +AR++
Sbjct: 297 FTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGN-IAVARRI 355
Query: 173 FDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAI 232
FD M+ ++VVSW ++SGY + A +F+ MP ++ +W +++G G DA+
Sbjct: 356 FDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDAL 415
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALI 292
F +M S+N++P T A++A G G L+ GK +HG++ + G + + NALI
Sbjct: 416 KLFNKMR---SENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALI 472
Query: 293 DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
MY +CG++KEA F SWN+MI++ HG ++ +F+ M+ I P
Sbjct: 473 TMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVA---EGIYP 529
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
D ++F+++L AC H GLV++G YF+ M + + I P +HY L+DLLGRAGR EA ++
Sbjct: 530 DRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDL 589
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKW 472
+K M EP +W ++L+GC+ G + A +L ++ P + G I+L+N Y G W
Sbjct: 590 IKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCW 649
Query: 473 DEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
+ +VRK+++DR K PGCSWIE +VH F D HP E+Y LE
Sbjct: 650 VDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLE 700
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 223/480 (46%), Gaps = 79/480 (16%)
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS---CPDVLESRG 132
+T L+ A+I+AYA + +HA+ A +++R ++ G +P+ + + +L + P++ R
Sbjct: 120 DTVLHNAVISAYA-RASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNI-SVRH 177
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSR--SGNDIGIARKLFDEMSDRNVVSWTAMISG 190
+H ++KSG V ALV Y + S ARK+ DEM +++ ++WT M+ G
Sbjct: 178 CAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVG 237
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y R GD+ A S+F+ + + WN++I+G +G+ +A FRRM +E + ++
Sbjct: 238 YVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLE---RVPLDE 294
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYR---NGLDLDSF-ISNALIDMYGKCGSLKEARR 306
T LSA + G+ GK +HG + R N + + ++NAL+ Y KCG++ ARR
Sbjct: 295 FTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARR 354
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM----------------------- 343
FD + K + SWN++++ + + ++ VFEEM
Sbjct: 355 IFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDA 414
Query: 344 -----RCQDHNIRPDGVTFISLLNAC-----------THGGLVEQG-----RAYFKLMTK 382
+ + N++P T+ + AC HG +V+ G A L+T
Sbjct: 415 LKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITM 474
Query: 383 TYR------------IEPQIE--HYGCLVDLLGRAGRFEEALEVVKGMKIE---PDEVVW 425
R + P I+ + ++ LG+ G EALE+ M E PD + +
Sbjct: 475 YARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISF 534
Query: 426 GSLLNGCKIYGRTD--FAEF-AVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
++L C G D F F ++K+ I P Y L ++ G G+ E R + K +
Sbjct: 535 LTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHY-TRLIDLLGRAGRIGEARDLIKTM 593
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 156/444 (35%), Positives = 248/444 (55%), Gaps = 40/444 (9%)
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
P+ + ++T + +Q +A ++ M G PN L +C V + K
Sbjct: 462 PDIITWNGLVTGF-TQYGDGKAALEFFQRMHSMGM-DPNTTTISGALAACGQVRNLKLGK 519
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H ++++ E V +AL++ YS G D
Sbjct: 520 EIHGYVLRNHIELSTGVGSALISMYS--GCD----------------------------- 548
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
++ A S+F + RDV WNS+I+ C Q+G +A+ R M + N+ N VT+V
Sbjct: 549 -SLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNL---SNVEVNTVTMV 604
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
AL A L+ GK IH ++ R GLD +FI N+LIDMYG+CGS++++RR FD ++
Sbjct: 605 SALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQR 664
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
L SWN MI+ + +HG +++ +F+ + ++P+ +TF +LL+AC+H GL+E+G
Sbjct: 665 DLVSWNVMISVYGMHGFGMDAVNLFQXF---RTMGLKPNHITFTNLLSACSHSGLIEEGW 721
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
YFK+M Y ++P +E Y C+VDLL RAG+F E LE ++ M EP+ VWGSLL C+I
Sbjct: 722 KYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRI 781
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+ D AE+A + L E++P + G +++ANIY G+W++ K+R ++K+R K PGCS
Sbjct: 782 HCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCS 841
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEI 518
WIEV +++H F D +HP E+I
Sbjct: 842 WIEVKRKLHSFVVGDTSHPLMEQI 865
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 225/500 (45%), Gaps = 91/500 (18%)
Query: 18 AILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDHLT 73
+IL++C + +L+ Q+ + L G F +L+ +C + + AR +FD ++
Sbjct: 94 SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYC--QTGCVEDARRMFDKMS 151
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
N + +TA++ Y + + L+ MV G +P+ F++P V K+C ++ R
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEET-IKLFYLMVNEG-VRPDHFVFPKVFKACSELKNYRVG 209
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
K V+ ++ GFE V+ ++++ + + G + IAR+ F+E+ ++V W M+SGYT
Sbjct: 210 KDVYDYMLSIGFEGNSCVKGSILDMFIKCGR-MDIARRFFEEIEFKDVFMWNIMVSGYTS 268
Query: 194 VGDIKNAASLFDSM------PDR----------------------------------DVP 213
G+ K A M PD+ +V
Sbjct: 269 KGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVV 328
Query: 214 AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH 273
+W ++IAG QNG +A+S FR+M +E ++PN +T+ A+SA + +L+ G+ IH
Sbjct: 329 SWTALIAGSEQNGYDFEALSVFRKMVLE---GVKPNSITIASAVSACTNLSLLRHGREIH 385
Query: 274 GYVYR-NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQS 332
GY + LD D + N+L+D Y KC S++ ARR F + L SWN+M+ +AL G
Sbjct: 386 GYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSH 445
Query: 333 ENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM------------ 380
E +I + EM + I PD +T+ L+ T G + +F+ M
Sbjct: 446 EEAIELLSEM---KFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTI 502
Query: 381 ---------TKTYRIEPQIEHY-------------GCLVDLLGRAGRFEEALEVVKGMKI 418
+ ++ +I Y L+ + E A V +
Sbjct: 503 SGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELST 562
Query: 419 EPDEVVWGSLLNGCKIYGRT 438
D VVW S+++ C GR+
Sbjct: 563 R-DVVVWNSIISACAQSGRS 581
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 219/459 (47%), Gaps = 35/459 (7%)
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
PN +TA+I A + Q + A S++R MV G +PN + +C ++ R +
Sbjct: 325 PNVVSWTALI-AGSEQNGYDFEALSVFRKMVLEG-VKPNSITIASAVSACTNLSLLRHGR 382
Query: 135 MVHTQIVK-SGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+H +K + +V +LV+ Y++ + +AR+ F + ++VSW AM++GY
Sbjct: 383 EIHGYCIKVEELDSDLLVGNSLVDYYAKC-RSVEVARRKFGMIKQTDLVSWNAMLAGYAL 441
Query: 194 VGDIKNAASLFDSMP----DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
G + A L M + D+ WN ++ G TQ G A+ FF+RM S + PN
Sbjct: 442 RGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMH---SMGMDPN 498
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
T+ AL+A G L+LGK IHGYV RN ++L + + +ALI MY C SL+ A F
Sbjct: 499 TTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFS 558
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
S + + WNS+I++ A G+S N++ + EM N+ + VT +S L AC+
Sbjct: 559 ELSTRDVVVWNSIISACAQSGRSVNALDLLREM---NLSNVEVNTVTMVSALPACSKLAA 615
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
+ QG+ + + + ++ L+D+ GR G +++ + M + D V W ++
Sbjct: 616 LRQGKEIHQFIIRC-GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMI 673
Query: 430 NGCKIYGRTDFAEFAVK-----KLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
+ +YG F AV + + + PN+ + +L+ G +E K KM+K
Sbjct: 674 S---VYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSAC-SHSGLIEEGWKYFKMMKT 729
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
A +D V Q+ + R + + LE
Sbjct: 730 EYA----------MDPAVEQYACMVDLLSRAGQFNETLE 758
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 103/220 (46%), Gaps = 41/220 (18%)
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L+LG +H + NG+D+ F+ + L+++Y + G +++ARR FD+ S++ + SW +++
Sbjct: 105 LRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEM 164
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
+ G E +I +F M+ + +RPD F + AC+ G+ + M +
Sbjct: 165 YCGLGDYEETIKLFYLMV---NEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYML-SIG 220
Query: 386 IEPQIEHYGCLVDLLGRAGR-------------------------------FEEALEVVK 414
E G ++D+ + GR F++AL+ +
Sbjct: 221 FEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCIS 280
Query: 415 GMK---IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
MK ++PD+V W ++++G Y ++ E A K +E+
Sbjct: 281 DMKLSGVKPDQVTWNAIISG---YAQSGQFEEASKYFLEM 317
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/487 (33%), Positives = 281/487 (57%), Gaps = 12/487 (2%)
Query: 45 NFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM 104
N Y++ + +K L AR +FD + + + M+ YA Q + A Y++
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYA-QDGNLHEALWFYKEF 170
Query: 105 VRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN 164
RR + N+F + +L +C + + + H Q++ +GF V+ +++++Y++ G
Sbjct: 171 -RRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQ 229
Query: 165 DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQ 224
+ A++ FDEM+ +++ WT +ISGY ++GD++ A LF MP+++ +W ++IAG +
Sbjct: 230 -MESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
G + A+ FR+M ++ ++P Q T L A L+ GK IHGY+ R + +
Sbjct: 289 QGSGNRALDLFRKM---IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPN 345
Query: 285 SFISNALIDMYGKCGSLKEARRAFDR-NSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
+ + ++LIDMY K GSL+ + R F + K WN+MI++ A HG ++ + ++M+
Sbjct: 346 AIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMI 405
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
+ ++P+ T + +LNAC+H GLVE+G +F+ MT + I P EHY CL+DLLGRA
Sbjct: 406 K---FRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRA 462
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLA 463
G F+E + ++ M EPD+ +W ++L C+I+G + + A +LI++DP + I+L+
Sbjct: 463 GCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLS 522
Query: 464 NIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKT--HPRTEEIYDA 521
+IY + GKW+ V K+R ++K R K SWIE++K+V F D + H R EEIY
Sbjct: 523 SIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFI 582
Query: 522 LESMVAL 528
L ++ A+
Sbjct: 583 LHNLAAV 589
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 193/415 (46%), Gaps = 44/415 (10%)
Query: 82 AMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIV 141
+ ++ +A++ A S A S + ++G P + +L+ C D + K +H +
Sbjct: 16 SFLSKHATK-AELSQAVSRLESLTQQGIRLPFDLL-ASLLQQCGDTKSLKQGKWIHRHLK 73
Query: 142 KSGFEQ-YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
+GF++ ++ L+ Y + G I A K+FD+M RN+ SW M+SGY + G + A
Sbjct: 74 ITGFKRPNTLLSNHLIGMYMKCGKPID-ACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRA 132
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF---FRRMGMEVSDNIRPNQVTLVCAL 257
+FDSMP+RDV +WN+++ G Q+G +A+ F FRR G I+ N+ + L
Sbjct: 133 RVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSG------IKFNEFSFAGLL 186
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
+A + LQL + HG V G + +S ++ID Y KCG ++ A+R FD + K +
Sbjct: 187 TACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIH 246
Query: 318 SWNSMINSFALHGQSENSICVFEEM---------------MRCQDHN------------- 349
W ++I+ +A G E + +F EM +R N
Sbjct: 247 IWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALG 306
Query: 350 IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEA 409
++P+ TF S L A + G+ M +T + P L+D+ ++G E +
Sbjct: 307 VKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEAS 365
Query: 410 LEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGYGIML 462
V + + D V W ++++ +G A + +I+ + PN ++L
Sbjct: 366 ERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVIL 420
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 185/552 (33%), Positives = 289/552 (52%), Gaps = 51/552 (9%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTPNT 77
+ E+C+ + LK L + + G + KL+ FC + +L YA+ +FD + PN
Sbjct: 120 LCEKCSSMRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNK 179
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
++Y ++I Y S A L+R M+ G PN+F P VLK+C +VH
Sbjct: 180 FMYNSLIRGY-SNSDDPIDAVLLFRRMICSGL-SPNEFTLPFVLKACGCKSAYWEAVLVH 237
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS-------- 189
+K G V+ AL+ Y G I ARKLFD+++D+ +VSW +MI
Sbjct: 238 GLAIKLGIGSLVFVQNALIAVYVVCGL-IHCARKLFDDITDKTLVSWNSMIEITGVKIDI 296
Query: 190 --------GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM--- 238
Y + G++ +A ++FD +++V +W S+I+ Q+G A F +M
Sbjct: 297 IVRNALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGK 356
Query: 239 --------------------GMEVSDNIR-----PNQVTLVCALSAIGHTGMLQLGKVIH 273
+++ + +R P++ TLV L+A G L +GK IH
Sbjct: 357 NVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIH 416
Query: 274 GYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSE 333
Y+ N + N+LIDMY KCG + A F K L SWN +I + ALHG
Sbjct: 417 NYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGL 476
Query: 334 NSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
+I +FEEM Q PD +T LL+AC+H GLV+ G YF M YR+ +IEHY
Sbjct: 477 EAIKLFEEM---QADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVXREIEHY 533
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDP 453
C+VDLLGR G EA+E++ M ++PD VVWG+LL C+I+G + + +K+L+E++P
Sbjct: 534 ACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEP 593
Query: 454 NNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHP 513
++GG ++++NIY E +W++V+K+RK++ DR K S IE+D +++F DK H
Sbjct: 594 HSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHK 653
Query: 514 RTEEIYDALESM 525
+ IY L+ +
Sbjct: 654 ISSSIYAMLDQL 665
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/347 (43%), Positives = 227/347 (65%), Gaps = 6/347 (1%)
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
VV A++ Y ++G I +A +F+ +P +DV +WN++I+G TQNGL S+AI +R M
Sbjct: 410 VVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMM-- 467
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
E I+ NQ T V L+A H G LQ G IHG++ + L LD F+ LID+YGKCG
Sbjct: 468 EECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGR 527
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
L +A F + ++ WN++I+ +HG E ++ +F EM QD ++PD VTFISL
Sbjct: 528 LVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREM---QDEGVKPDHVTFISL 584
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC+H GLV++G+ +F LM + Y I+P ++HYGC+VDLLGRAG E A + +K M + P
Sbjct: 585 LSACSHSGLVDEGKWFFHLM-QEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHP 643
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
D +WG+LL C+I+G + +FA +L E+D N GY ++L+NIY +GKW+ V KVR
Sbjct: 644 DASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRS 703
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+ ++R KTPG S IEV+++V F++ +++HP+ +EIY L + A
Sbjct: 704 LARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTA 750
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 223/477 (46%), Gaps = 54/477 (11%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
++ + C K+L + L G+ Q+NF + +LV L +++ +R FD + +
Sbjct: 81 SLFDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYA-SLGDVSLSRGTFDQIQRKDV 139
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
Y + +MI+AY + H A + ++ + Q + + +P VLK+C +++ R +H
Sbjct: 140 YTWNSMISAYV-RNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVDGRK---IH 195
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
+ K GF+ V +L++ YSR G +GIAR
Sbjct: 196 CWVFKLGFQWDVFVAASLIHMYSRFGF-VGIAR--------------------------- 227
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
SLFD MP RD+ +WN++I+G QNG + A+ M +E I + VT+ L
Sbjct: 228 ----SLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE---GINMDSVTVASIL 280
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
G + +IH YV ++GL+ + F+SNALI+MY K G+L +A++ F + + +
Sbjct: 281 PVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVV 340
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
SWNS+I A + Q+++ + + Q + + PD +T +SL + + R+
Sbjct: 341 SWNSII---AAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVH 397
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
+ + + + ++D+ + G + A +V + ++ D V W +L++G Y +
Sbjct: 398 GFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVK-DVVSWNTLISG---YTQ 453
Query: 438 TDFAEFAV------KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
A A+ ++ EI N G + +LA Y +G + ++ L N +
Sbjct: 454 NGLASEAIEVYRMMEECREIKLNQGTWVSILAA-YAHVGALQQGMRIHGHLIKTNLH 509
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/475 (34%), Positives = 265/475 (55%), Gaps = 13/475 (2%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
++ ++ AR +F+ + ++ AMI+ Y Q + AF L+R MV P ++F
Sbjct: 245 VRRGDVNAARSVFEEVDGKFDVVWNAMISGYV-QSGMCADAFELFRRMVSEKVPL-DEFT 302
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKL 172
+ VL +C + K VH QI++ P V ALV YS+ G I IA+++
Sbjct: 303 FTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGK-IVIAKRI 361
Query: 173 FDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAI 232
FD M+ ++VVSW ++SGY G + A +F MP ++ +W +++G GL DA+
Sbjct: 362 FDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDAL 421
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALI 292
F +M E +++P T A++A G G L+ G+ +H ++ + G + + NAL+
Sbjct: 422 KLFNQMRAE---DVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALL 478
Query: 293 DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
MY KCG++ +AR F SWN+MI++ HG ++ +F++M+ I P
Sbjct: 479 TMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVA---EGIDP 535
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
D ++F+++L AC H GLV++G YF+ M + + I P +HY L+DLLGR+GR EA ++
Sbjct: 536 DRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDL 595
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKW 472
+K M EP +W ++L+GC+ G +F +A +L + P + G I+L+N Y G+W
Sbjct: 596 IKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRW 655
Query: 473 DEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+ +VRK+++DR K PGCSWIEV ++H F D HP +E+Y LE + A
Sbjct: 656 VDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGA 710
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 220/481 (45%), Gaps = 81/481 (16%)
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV--LESRGT 133
+T L+ AM++A+A + + A+ A S++ ++ G +P+ + + ++ + + L +
Sbjct: 126 DTVLHNAMMSAFA-RASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHC 184
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGI--ARKLFDEMSDRNVVSWTAMISGY 191
+H ++KSG V AL+ Y + ARK+ DEM D++ ++WT M+ GY
Sbjct: 185 TQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGY 244
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
R GD+ A S+F+ + + WN++I+G Q+G+ +DA FRRM VS+ + ++
Sbjct: 245 VRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRM---VSEKVPLDEF 301
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYR---NGLDLDSF-ISNALIDMYGKCGSLKEARRA 307
T LSA + G GK +HG + R N + + ++NAL+ +Y K G + A+R
Sbjct: 302 TFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRI 361
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM------------------------- 342
FD + K + SWN++++ + G + ++ VF+ M
Sbjct: 362 FDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDAL 421
Query: 343 -----MRCQDHNIRPDGVTFISLLNACTHGGLVEQGR-------------------AYFK 378
MR +D ++P T+ + AC G ++ GR A
Sbjct: 422 KLFNQMRAED--VKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLT 479
Query: 379 LMTK---------TYRIEPQIE--HYGCLVDLLGRAGRFEEALEVVKGM---KIEPDEVV 424
+ K + + P ++ + ++ LG+ G EALE+ M I+PD +
Sbjct: 480 MYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRIS 539
Query: 425 WGSLLNGCKIYGRTD--FAEF-AVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
+ ++L C G D F F ++K+ I P Y L ++ G G+ E R + K
Sbjct: 540 FLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA-RLIDLLGRSGRIGEARDLIKT 598
Query: 482 L 482
+
Sbjct: 599 M 599
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 117/312 (37%), Gaps = 68/312 (21%)
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF------RR--- 237
+I YT D+ A+LF S PD A S++A G DA +FF RR
Sbjct: 69 LIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTV 128
Query: 238 ----------------------MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKV--IH 273
+ S ++RP+ + +SA+G L +H
Sbjct: 129 LHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLH 188
Query: 274 GYVYRNGLDLDSFISNALIDMYGKCGSLK---EARRAFDRNSKKRLTSWNSMINSFALHG 330
V ++G +SNALI +Y KC + + +AR+ D K +W +M+ + G
Sbjct: 189 CSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRG 248
Query: 331 QSENSICVFEEM----------------------------MRCQDHNIRPDGVTFISLLN 362
+ VFEE+ R + D TF S+L+
Sbjct: 249 DVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLS 308
Query: 363 ACTHGGLVEQGRAYFKLMTK---TYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
AC + G G++ + + + E + LV L + G+ A + M ++
Sbjct: 309 ACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK 368
Query: 420 PDEVVWGSLLNG 431
D V W ++L+G
Sbjct: 369 -DVVSWNTILSG 379
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/472 (35%), Positives = 265/472 (56%), Gaps = 40/472 (8%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K +L AR +FD + N +TAMI+AY SQ +AS A SL+ M+R G +PN+F
Sbjct: 104 VKCDSLRDARHVFDVMPERNVVSWTAMISAY-SQRGYASQALSLFVQMLRSG-TEPNEFT 161
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ VL SC + +H+ I+K +E + V ++L++ Y++ G I AR +F +
Sbjct: 162 FATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGK-IHEARGIFQCL 220
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+R+VVS TA+ISGY Q GL +A+ FR
Sbjct: 221 PERDVVSCTAIISGY-------------------------------AQLGLDEEALELFR 249
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
R+ E ++ N VT L+A+ L GK +H ++ R+ + + N+LIDMY
Sbjct: 250 RLQRE---GMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYS 306
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG+L ARR FD ++ + SWN+M+ ++ HG+ + +F M+ ++ ++PD VT
Sbjct: 307 KCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMI--DENKVKPDSVT 364
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTK-TYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
+++L+ C+HGGL ++G F MT ++P +HYGC+VD+LGRAGR E A E VK
Sbjct: 365 VLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKK 424
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M EP +WG LL C ++ D EF +L++I+P N G ++L+N+Y G+W++V
Sbjct: 425 MPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDV 484
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
R +R ++ + K PG SWIE+D+ +H FH+ D +HPR EE+ ++ + A
Sbjct: 485 RSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSA 536
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 160/349 (45%), Gaps = 49/349 (14%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T +I Y + +++A +FD MP+R+V +W ++I+ +Q G S A+S F +M +
Sbjct: 97 TRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQM---LRS 153
Query: 245 NIRPNQVTLVCAL-SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
PN+ T L S IG +G + LG+ IH ++ + + ++ ++L+DMY K G + E
Sbjct: 154 GTEPNEFTFATVLTSCIGSSGFV-LGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHE 212
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
AR F ++ + S ++I+ +A G E ++ +F R Q ++ + VT+ S+L A
Sbjct: 213 ARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFR---RLQREGMQSNYVTYTSVLTA 269
Query: 364 CTHGGLVEQGRA-----------------------YFKLMTKTY--RI-----EPQIEHY 393
+ ++ G+ Y K TY RI E + +
Sbjct: 270 LSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISW 329
Query: 394 GCLVDLLGRAGRFEEALEVVKGM----KIEPDEVVWGSLLNGCKIYGRTD-----FAEFA 444
++ + G E LE+ M K++PD V ++L+GC G D F +
Sbjct: 330 NAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMT 389
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
K I + P++ YG ++ ++ G G+ + + K + + GC
Sbjct: 390 SGK-ISVQPDSKHYGCVV-DMLGRAGRVEAAFEFVKKMPFEPSAAIWGC 436
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
G+ +H ++ + ++ LI Y KC SL++AR FD ++ + SW +MI++++
Sbjct: 77 GQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQ 136
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
G + ++ +F +M+R P+ TF ++L +C GR + K E
Sbjct: 137 RGYASQALSLFVQMLRS---GTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKL-NYEA 192
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ L+D+ + G+ EA + + + E D V ++++G
Sbjct: 193 HVYVGSSLLDMYAKDGKIHEARGIFQCLP-ERDVVSCTAIISG 234
>gi|347954502|gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/456 (37%), Positives = 261/456 (57%), Gaps = 15/456 (3%)
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC---PDVLE 129
T+ +T+ IT S+ + A + DM R +PN + +L +C P E
Sbjct: 17 TSETIVSWTSRITLL-SRDGRLAEAVREFSDM-RLAGIEPNHITFIALLSACGNFPSGSE 74
Query: 130 SRGTKMVHTQIVKSGFEQ-YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
G ++H K G E+ + +V TA++ YS+SG+ + AR +FD + D+N V+W MI
Sbjct: 75 GLGY-LLHGYACKLGLERSHVMVGTAILGMYSKSGH-LRKARLVFDYIEDKNSVTWNTMI 132
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
GY R G + NA +FD MPDRD+ +W ++I G + G +A+++FR M + + P
Sbjct: 133 DGYMRNGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQIS---GVNP 189
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
+ V ++ A++A + G L G +H YV + +SN+LID+Y +CG ++ AR+ F
Sbjct: 190 DYVAIISAVAACTNLGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVF 249
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
D+ K+ + SWNS+I FA +G + S+ F +M R PDGVTF L AC+H G
Sbjct: 250 DKMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQR---EGFTPDGVTFTGALTACSHVG 306
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
LVE+G YF++M YRI P+IEHYGCLVDL RAGR E+A VV+ M ++P+EVV GSL
Sbjct: 307 LVEEGFQYFQMMKHDYRISPRIEHYGCLVDLYSRAGRLEDAFIVVESMPMKPNEVVIGSL 366
Query: 429 LNGCKIYG-RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
L C+ +G T AE +K + ++D + ++L+N+Y GKW+ K+R+ +K
Sbjct: 367 LAACRNHGNHTILAERLMKYITDLDVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGL 426
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K PG S IE+D H F + D H T I + LE
Sbjct: 427 KKQPGYSSIEIDDCTHVFMAGDSAHVETAYIREVLE 462
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 132/309 (42%), Gaps = 71/309 (22%)
Query: 173 FDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAI 232
++ + +VSWT+ I+ +R G + A F M
Sbjct: 13 LNQSTSETIVSWTSRITLLSRDGRLAEAVREFSDM------------------------- 47
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGH--TGMLQLGKVIHGYVYRNGLDLDS-FISN 289
R G+E PN +T + LSA G+ +G LG ++HGY + GL+ +
Sbjct: 48 ---RLAGIE------PNHITFIALLSACGNFPSGSEGLGYLLHGYACKLGLERSHVMVGT 98
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM------- 342
A++ MY K G L++AR FD K +WN+MI+ + +GQ +N++ VF++M
Sbjct: 99 AILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMIDGYMRNGQVDNAVDVFDKMPDRDLIS 158
Query: 343 ---------------------MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK-LM 380
Q + PD V IS + ACT+ G + G + ++
Sbjct: 159 WTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIISAVAACTNLGALSFGLWVHRYVL 218
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV-WGSLLNGCKIYGRTD 439
++ +R ++ + L+DL R G E A +V K+E VV W S++ G G +
Sbjct: 219 SQDFRNNVRVSN--SLIDLYCRCGCVEFARQVFD--KMEKRTVVSWNSVIVGFAANGNAN 274
Query: 440 FAEFAVKKL 448
+ +K+
Sbjct: 275 ESLVYFRKM 283
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 103/243 (42%), Gaps = 48/243 (19%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + + +TAMIT + + H A + +R+M G P+ + +C ++
Sbjct: 147 VFDKMPDRDLISWTAMITGFVKKGFH-EEALAWFREMQISG-VNPDYVAIISAVAACTNL 204
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
VH ++ F V +L++ Y R G + AR++FD+M R VVSW
Sbjct: 205 GALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGC-VEFARQVFDKMEKRTVVSW--- 260
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
NSVI G NG ++++ +FR+M E
Sbjct: 261 ----------------------------NSVIVGFAANGNANESLVYFRKMQRE---GFT 289
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS------NALIDMYGKCGSL 301
P+ VT AL+A H G+++ G+ Y + D IS L+D+Y + G L
Sbjct: 290 PDGVTFTGALTACSHVGLVE-----EGFQYFQMMKHDYRISPRIEHYGCLVDLYSRAGRL 344
Query: 302 KEA 304
++A
Sbjct: 345 EDA 347
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/506 (32%), Positives = 280/506 (55%), Gaps = 41/506 (8%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYL 79
L C ++ ++Q+ + + T G + A KL+ + ++ L A+ +FD ++ + Y
Sbjct: 60 LLSCRNLFQVRQVHAQIATNGAFRNLAVANKLL-YMYVERGALEDAQELFDGMSKRHPYS 118
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
++ ++ YA + + S F ++R+++R G P + + P V+++C D+ + + +++H
Sbjct: 119 WSVIVGGYA-KVGNFFSCFWMFRELLRSGAPL-DDYSAPVVIRACRDLKDLKCGRLIHCI 176
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
+K G + V LV+ Y+R +++
Sbjct: 177 TLKCGLDYGHFVCATLVDMYARCKV--------------------------------VED 204
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
A +F M RD+ W +I ++G+ +++ FF RM + I P++V LV + A
Sbjct: 205 AHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMR---NQGIVPDKVALVTVVYA 261
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSW 319
G + K IH Y+ G LD + A+IDMY KCGS++ AR FDR + + +W
Sbjct: 262 CAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITW 321
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
++MI ++ HGQ E ++ +F M+R I P+ +TF+SLL AC+H GL+E+G+ +F
Sbjct: 322 SAMIAAYGYHGQGEKALELFPMMLR---SGILPNRITFVSLLYACSHAGLIEEGQRFFSS 378
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
M Y + P ++HY C+VDLLGRAGR +EALE+++GM +E DEV+WG+LL C+I+ D
Sbjct: 379 MWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLD 438
Query: 440 FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVD 499
AE + L+++ G+ ++L+NIY GKW+++ K R ++ K PG +WIEV
Sbjct: 439 LAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVG 498
Query: 500 KQVHQFHSLDKTHPRTEEIYDALESM 525
++++QF DKTHPR+ EIY L+ +
Sbjct: 499 EKLYQFGVGDKTHPRSNEIYKMLKRL 524
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 165/471 (35%), Positives = 273/471 (57%), Gaps = 21/471 (4%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV-LKS 123
A +FD + + YTA++T YAS+ + SA +++ ++ + N I +V +
Sbjct: 117 AHKVFDRSSHRDVVSYTALVTGYASR-GYIESARNMFDEIPVKDVVSWNAMISGYVETGN 175
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR---- 179
+ LE + +++K+ ++++ +RSG+ I + R++ ++D
Sbjct: 176 YKEALE------LFKEMMKTNVRPDESTMVTVISASARSGS-IELGRQVHSWIADHGFGS 228
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
N+ A+I Y++ G+++ A LF + +DV +WN +I G T L+ +A+ F+ M
Sbjct: 229 NLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEM- 287
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR--NGLDLDSFISNALIDMYGK 297
+ PN VT++ L A H G + +G+ IH Y+ + G+ S + +LIDMY K
Sbjct: 288 --LRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSK 345
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG ++ A + F+ K L +WN+MI FA+HG++ + +F M + + I+PD +TF
Sbjct: 346 CGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRM---RKNEIKPDDITF 402
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+ LL+AC+H G+++ GR F+ MT Y+I P++EHYGC++DLLG +G F+EA E++ M
Sbjct: 403 VGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMT 462
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+EPD V+W SLL CK++G + E + L +I+PNN G ++L+NIY G+W+EV +
Sbjct: 463 MEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVAR 522
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
+R +L D+ K PGCS IE+D VH+F DK HPR EIY LE M L
Sbjct: 523 IRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL 573
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 220/409 (53%), Gaps = 15/409 (3%)
Query: 52 VRFCTLK--LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQ 109
+ FC L L YA +F+ + PN ++ M +A P SA LY M+ G
Sbjct: 1 LEFCILSPHFEGLPYAISVFETIQEPNLLIWNTMFRGHALSP-DPVSALKLYVCMISLGL 59
Query: 110 PQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIA 169
PN + +P +LKSC + S+ +H ++K G+E V T+L++ Y ++ + A
Sbjct: 60 -LPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQN-ERLEDA 117
Query: 170 RKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
K+FD S R+VVS+TA+++GY G I++A ++FD +P +DV +WN++I+G + G +
Sbjct: 118 HKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYK 177
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
+A+ F+ M + N+RP++ T+V +SA +G ++LG+ +H ++ +G + I N
Sbjct: 178 EALELFKEM---MKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVN 234
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
ALID Y KCG ++ A F S K + SWN +I + + ++ +F+EM+R +
Sbjct: 235 ALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGE-- 292
Query: 350 IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR-IEPQIEHYGCLVDLLGRAGRFEE 408
P+ VT +S+L+AC H G ++ GR + K + + L+D+ + G E
Sbjct: 293 -SPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEA 351
Query: 409 ALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD--FAEFAVKKLIEIDPNN 455
A +V M + W +++ G ++GR + F F+ + EI P++
Sbjct: 352 AHQVFNSM-LHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDD 399
>gi|242054761|ref|XP_002456526.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
gi|241928501|gb|EES01646.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
Length = 552
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 276/517 (53%), Gaps = 47/517 (9%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYA---- 65
+ L V+++L C + L+ + LT L + AF L + S
Sbjct: 15 EALEAHVVSLLRGCRGLLALRSAHAHLTRLRLPRLT-AAFALSKLLAACASAPAPPAAAA 73
Query: 66 ----RFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
R +FD + P + Y ++I A + A + A ++YR M+R G P+PN F L
Sbjct: 74 SSYARTLFDQIPDPTAFCYNSLIRALPAAGAAPAPALAVYRLMLRAGSPRPNTFTLAFAL 133
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
K+C V + +H Q ++ G E V+T L+N Y++ + +AR +FD M+
Sbjct: 134 KACAAVPAPGEGRQLHAQALRQGLEASAYVQTGLLNLYAKC-EQVALARTVFDGMA---- 188
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
PD+ + AW+++I G ++ G+ ++A+ FR M
Sbjct: 189 --------------------------PDKSLVAWSAMINGYSRVGMVTEALGLFREMQ-- 220
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+ + P++VT+V +SA G L LGK +H Y+ R G+ +D +S ALIDMY KCG +
Sbjct: 221 -AVGVEPDEVTMVGVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLI 279
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+ AR FD +K +W++MI FA+HG E+++ +F M+ + +RP+ VTFI +L
Sbjct: 280 ERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELK---VRPNNVTFIGVL 336
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
+AC H GLV+ GR Y+ +M + I+P +E+YGC++DLL R+G ++A V M I P+
Sbjct: 337 SACAHSGLVDDGRRYWSIM-QNLGIKPSMENYGCMIDLLCRSGLLDDAYSFVIDMPISPN 395
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
++W +LL CK R D AE A K+L+E++P+N ++L+N+ +WD V +RK
Sbjct: 396 SIIWRTLLVACKSSNRIDIAESASKRLLELEPHNPENYVLLSNLCASNSQWDRVSYLRKK 455
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
+KD N GCS IE++ +H+F D +HP +EI
Sbjct: 456 MKDSNVTAVAGCSSIEINGYLHEFVVSDDSHPEIKEI 492
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 263/467 (56%), Gaps = 11/467 (2%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + + MI Y Q A LY+ + G + + + +L +C
Sbjct: 261 AREVFDKMKKRDMVSWNVMIGCYV-QNGDFHEALELYQKLDMEGFKR-TKATFVSILGAC 318
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
V ++VH+ I++ G + V TALVN Y++ G+ + ARK+F+ M +R+ V+W
Sbjct: 319 SSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGS-LEEARKVFNAMKNRDAVAW 377
Query: 185 TAMISGYTRVG---DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
+ +I Y G D + A +FD + RD WN++I QNG A+ FR M
Sbjct: 378 STLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREM--T 435
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+ ++P+ VT + L A G L K +H + + L+ + ++N LI+MY +CGSL
Sbjct: 436 GAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSL 495
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+EA R F +K + SW +M+ +F+ +G+ ++ +F+EM ++PD VT+ S+L
Sbjct: 496 EEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEM---DLEGVKPDDVTYTSIL 552
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
CTHGG +EQG YF M + + + P +H+ +VDLLGR+GR +A E+++ M EPD
Sbjct: 553 FVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPD 612
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
V W + L C+I+G+ + E A +++ E+DP++ I ++NIY G W++V VRK
Sbjct: 613 PVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKK 672
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
+++R K PG S+IEVD ++H+F S K HPRT+EI + L + L
Sbjct: 673 MEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGL 719
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 204/447 (45%), Gaps = 94/447 (21%)
Query: 64 YARF--------IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQF 115
YARF +F L T + + A+I A+ SQ S A ++++M + +PN
Sbjct: 152 YARFGSVGDAKRMFQSLQTRDETSWNAVILAH-SQSGDWSGALRIFKEM--KCDMKPNST 208
Query: 116 IYPHVLK--SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLF 173
Y +V+ S P+VL + +H +IV +GF+ VV TAL+N Y + G+ AR++F
Sbjct: 209 TYINVISGFSTPEVLPE--GRKIHAEIVANGFDSDLVVATALINMYGKCGSS-HEAREVF 265
Query: 174 DEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
D+M R++VSW MI Y QNG F +A+
Sbjct: 266 DKMKKRDMVSWNVMIGCY-------------------------------VQNGDFHEALE 294
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
++++ ME + + T V L A L G+++H ++ GLD + ++ AL++
Sbjct: 295 LYQKLDME---GFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVN 351
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG---------------QSENSIC- 337
MY KCGSL+EAR+ F+ + +W+++I ++A +G S ++IC
Sbjct: 352 MYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICW 411
Query: 338 ------------------VFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
+F EM ++PD VTFI++L AC G + + +A
Sbjct: 412 NAMITTYVQNGCAVAAMKIFREMTGAA--GLKPDAVTFIAVLEACASLGRLSEVKALHAQ 469
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
++++ +E + L+++ R G EEA + K E V W +++ YGR
Sbjct: 470 ISES-ELESNVVVTNTLINMYARCGSLEEAERLFAAAK-EKTVVSWTAMVAAFSQYGR-- 525
Query: 440 FAE----FAVKKLIEIDPNNGGYGIML 462
+AE F L + P++ Y +L
Sbjct: 526 YAEALDLFQEMDLEGVKPDDVTYTSIL 552
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 176/376 (46%), Gaps = 48/376 (12%)
Query: 58 KLSNLTYARFIFDHLT--TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQF 115
K +L AR +F+ + N + AMI AYA Q H++ A LY M +G +
Sbjct: 54 KCDSLVDARSVFESMDWRQRNVVSWNAMIAAYA-QNGHSTEALVLYWRMNLQGLG-TDHV 111
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
+ VL +C + + R +H ++ SG + + + ALV Y+R G+
Sbjct: 112 TFVSVLGACSSLAQGR---EIHNRVFYSGLDSFQSLANALVTMYARFGS----------- 157
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
VGD K +F S+ RD +WN+VI +Q+G +S A+ F
Sbjct: 158 ------------------VGDAKR---MFQSLQTRDETSWNAVILAHSQSGDWSGALRIF 196
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
+ M +++PN T + +S +L G+ IH + NG D D ++ ALI+MY
Sbjct: 197 KEMKC----DMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMY 252
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
GKCGS EAR FD+ K+ + SWN MI + +G ++ +++++ +
Sbjct: 253 GKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKL---DMEGFKRTKA 309
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF+S+L AC+ + QGR + + ++ ++ LV++ + G EEA +V
Sbjct: 310 TFVSILGACSSVKALAQGRLVHSHILER-GLDSEVAVATALVNMYAKCGSLEEARKVFNA 368
Query: 416 MKIEPDEVVWGSLLNG 431
MK D V W +L+
Sbjct: 369 MK-NRDAVAWSTLIGA 383
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 190/420 (45%), Gaps = 92/420 (21%)
Query: 111 QPNQFIYPHVL---KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIG 167
QP+ + VL SC DV E R +H +I S FE+ +V GN
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRA---LHERIRCSRFERDTMV-----------GN--- 46
Query: 168 IARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP--DRDVPAWNSVIAGCTQN 225
A+IS Y + + +A S+F+SM R+V +WN++IA QN
Sbjct: 47 ------------------ALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQN 88
Query: 226 GLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
G ++A+ + RM ++ + + VT V S +G L G+ IH V+ +GLD
Sbjct: 89 GHSTEALVLYWRMNLQ---GLGTDHVTFV---SVLGACSSLAQGREIHNRVFYSGLDSFQ 142
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
++NAL+ MY + GS+ +A+R F + TSWN++I + + G ++ +F+E M+C
Sbjct: 143 SLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKE-MKC 201
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
+++P+ T+I++++ + ++ +GR + + + L+++ G+ G
Sbjct: 202 ---DMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVAN-GFDSDLVVATALINMYGKCGS 257
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGC-----------KIYGRTDFAEF----------- 443
EA EV MK + D V W ++ GC ++Y + D F
Sbjct: 258 SHEAREVFDKMK-KRDMVSWNVMI-GCYVQNGDFHEALELYQKLDMEGFKRTKATFVSIL 315
Query: 444 ----AVKKLIE------------IDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
+VK L + +D + L N+Y + G +E RKV +K+R+A
Sbjct: 316 GACSSVKALAQGRLVHSHILERGLD-SEVAVATALVNMYAKCGSLEEARKVFNAMKNRDA 374
>gi|297827241|ref|XP_002881503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327342|gb|EFH57762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 669
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/497 (33%), Positives = 274/497 (55%), Gaps = 9/497 (1%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
+Q+ F+ G F L+ + T K N+ AR +FD ++ + + +MI+ Y S
Sbjct: 152 RQVHGFVIRGGSDSDVFVGNGLITYYT-KCDNIESARKVFDEMSDRDVVSWNSMISGY-S 209
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
Q LY+ M+ +PN+ VL++C + VH +++++ +
Sbjct: 210 QSGSFEDCKKLYKAMLGCSDFKPNEVTVISVLQACGQSSDLVFGMEVHKKMIENHIQMDL 269
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
+ A++ Y++ G+ + AR LFDEMS+++ V++ A+ISGY G +K A +LF M
Sbjct: 270 SLCNAVIGFYAKCGS-LDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMES 328
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
+ WN+VI+G QN + I+ FR M + RPN VTL L ++ ++ L+ G
Sbjct: 329 IGLSTWNAVISGLMQNNHHEEVINSFREM---IRCGSRPNTVTLSSLLPSLTYSSNLKGG 385
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
K IH + RNG D + +++ ++ID Y K G L A+R FD + L W ++I ++A+H
Sbjct: 386 KEIHAFAIRNGSDNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIVWTAIITAYAVH 445
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
G S+++ +F++M Q +PD VT ++L+A H G ++ + F M Y IEP
Sbjct: 446 GDSDSACSLFDQM---QCLGTKPDNVTLTAVLSAFAHSGDSDKAQHIFDSMLTKYNIEPG 502
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
+EHY C+V +L RAG+ A+E + M IEP VWG+LLNG + G + A FA +L
Sbjct: 503 VEHYACMVSVLSRAGKLSNAMEFISKMPIEPIAKVWGALLNGASVLGDVEIARFACDRLF 562
Query: 450 EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLD 509
E++P N G ++AN+Y + G+W+E VR +K K PG SWIE +K + F + D
Sbjct: 563 EMEPENTGNYTIMANLYTQAGRWEEAEVVRDKMKRIGLKKIPGTSWIETNKGLRSFIAKD 622
Query: 510 KTHPRTEEIYDALESMV 526
+ R++E+YD +E +V
Sbjct: 623 SSCERSKEMYDIIEGLV 639
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 197/459 (42%), Gaps = 92/459 (20%)
Query: 28 HLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAY 87
H QL + + + NF A KL+ F T + + A +FD +T N + Y A++ AY
Sbjct: 40 HALQLHARIVVFSIAPDNFLASKLISFYT-RQNRFHQALHVFDEITVRNAFSYNALLIAY 98
Query: 88 ASQPAHASSAFSLYRDMV-----RRGQPQPNQFIYPHVLKS---CPDVLESRGTKMVHTQ 139
S+ + AFSL+ + G +P+ VLK+ C D + VH
Sbjct: 99 TSREMYF-DAFSLFLSWIGSSCYSSGAARPDSISISCVLKALSGCDDFWLGSLARQVHGF 157
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
+++ G + V L+ Y++ N I ARK+FDEMSDR+VVSW +MISGY++ G ++
Sbjct: 158 VIRGGSDSDVFVGNGLITYYTKCDN-IESARKVFDEMSDRDVVSWNSMISGYSQSGSFED 216
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
L+ +M GC+ + +PN+VT++ L A
Sbjct: 217 CKKLYKAM------------LGCS---------------------DFKPNEVTVISVLQA 243
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR---- 315
G + L G +H + N + +D + NA+I Y KCGSL AR FD S+K
Sbjct: 244 CGQSSDLVFGMEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTY 303
Query: 316 ---------------------------LTSWNSMINSFALHGQSENSICVFEEMMRCQDH 348
L++WN++I+ + E I F EM+RC
Sbjct: 304 GAIISGYMAHGLVKEAMALFSEMESIGLSTWNAVISGLMQNNHHEEVINSFREMIRCGS- 362
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT------YRIEPQIEHYGCLVDLLGR 402
RP+ VT SLL + T+ ++ G+ + Y I++Y L LLG
Sbjct: 363 --RPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGSDNNIYVTTSIIDNYAKLGFLLGA 420
Query: 403 AGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
F+ + +VW +++ ++G +D A
Sbjct: 421 QRVFDNCK--------DRSLIVWTAIITAYAVHGDSDSA 451
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/598 (31%), Positives = 296/598 (49%), Gaps = 118/598 (19%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFDHLTTPNTYLYTAMITA 86
L+ + + + G TN+ KL+ FC L L YA +F+ + PN ++ M
Sbjct: 3 LRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 62
Query: 87 YA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYP--------------------HVLKSC 124
+A S P SA LY M+ G PN + +P HVLK
Sbjct: 63 HALSSDPV---SALYLYVCMISLGL-LPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLG 118
Query: 125 PDVLESRGTKMV--------------------HTQIV------------------KSGFE 146
D+ T ++ H +V + F+
Sbjct: 119 YDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFD 178
Query: 147 QYPVVET----ALVNSYSRSGNDIGIARKLFDEMSD------------------------ 178
+ P+ + A+++ Y+ +GN+ A +LF EM
Sbjct: 179 EIPIKDVVSWNAMISGYAETGNN-KEALELFKEMMKTNVRPDESTMVSVVSACAQSASIE 237
Query: 179 --RNVVSW-------------TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCT 223
R V SW A+I Y + G+++ A LF+ + +DV +WN++I G T
Sbjct: 238 LGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYT 297
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR--NGL 281
L+ +A+ F+ M + PN VT++ L A H G +++G+ IH Y+ + G+
Sbjct: 298 HMNLYKEALLLFQEM---LRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGV 354
Query: 282 DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEE 341
S +LIDMY KCG ++ A++ FD + L+SWN+MI FA+HG++ + +F
Sbjct: 355 ANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSR 414
Query: 342 MMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG 401
M + + I PD +TF+ LL+AC+H G+++ GR F+ M + Y+I P++EHYGC++DLLG
Sbjct: 415 MRK---NEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLG 471
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIM 461
+G F+EA E++ M++EPD V+W SLL CK++G + E + LI+I+P N G ++
Sbjct: 472 HSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVL 531
Query: 462 LANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
L+NIY G+W+EV K+R +L D+ K PGCS IE+D VH+F DK HPR EIY
Sbjct: 532 LSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 589
>gi|225456505|ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
[Vitis vinifera]
Length = 523
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/409 (37%), Positives = 246/409 (60%), Gaps = 12/409 (2%)
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS-- 177
+L++C + R H +I+K G+ YP + T+LV++Y+ + + +A +L DEM
Sbjct: 26 ILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYAHC-DCLDLAHQLLDEMPYW 84
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
++++ +I+ +VG+ A +F M RDV WNS+I GC +N F +A+ FFR
Sbjct: 85 GFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFRE 144
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M ++ N+ P+ T ++ G +++HG + + L+ +S+ALID+Y K
Sbjct: 145 M---LNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSK 201
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG + A++ F+ ++ WNSMIN A+HG + ++I VF +M + ++ PD +TF
Sbjct: 202 CGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQM---EMESVSPDSITF 258
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
I +L AC+H GLVEQGR YF LM + Y I+PQ+EHYG +VDLLGRAG EEA ++K M
Sbjct: 259 IGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMP 318
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+EPD V+W +LL+ C+ + + E A+ K+ + N+G Y I+L+N+Y L KWD +
Sbjct: 319 MEPDIVIWRALLSACRNFKNPELGEVAIAKISHL--NSGDY-ILLSNMYCSLEKWDSAER 375
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
VR+M+K K G SW+E+ +HQF + D++HP T IY LE ++
Sbjct: 376 VREMMKRDGVRKNRGRSWVELGGVIHQFKAGDRSHPETGAIYKVLEGLI 424
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 112/251 (44%), Gaps = 42/251 (16%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K+ +A+ +F + + + +MI + A +R+M+ +P+ F
Sbjct: 99 MKVGEFDFAKRVFRKMLRRDVVTWNSMIGG-CVRNERFEEALRFFREMLN-SNVEPDGFT 156
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ V+ C + S ++VH +++ + ++ +AL++ YS+ G I A+K+F+ +
Sbjct: 157 FASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGR-INTAKKVFNSI 215
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+V W +MI+G +GL DAI F
Sbjct: 216 QHDDVSVWNSMINGL-------------------------------AIHGLALDAIGVFS 244
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN---GLDLDSFISNALID 293
+M ME ++ P+ +T + L+A H G+++ G+ + R+ L+ + A++D
Sbjct: 245 QMEME---SVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHY--GAMVD 299
Query: 294 MYGKCGSLKEA 304
+ G+ G ++EA
Sbjct: 300 LLGRAGLVEEA 310
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 267/512 (52%), Gaps = 39/512 (7%)
Query: 15 QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHLT 73
Q++++++ C+ HL Q+ + + Q +F + + + L S ++ Y+ +F +
Sbjct: 70 QLISLIKSCSKKTHLLQIHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYSSQVFSQIM 129
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
P+ Y MI AY S F LYR+M RRG P PN V+KSC + G
Sbjct: 130 KPSGSQYNVMIRAY-SMSHSPEQGFYLYREMRRRGVP-PNPLSSSFVMKSCIRISSLMGG 187
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+H +I++ G + ++ T L++ YS F+E
Sbjct: 188 LQIHARILRDGHQSDNLLLTTLMDLYSCCDK--------FEE------------------ 221
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
A +FD +P D +WN +I+ C N DA+ F M +D P+ VT
Sbjct: 222 ------ACKVFDEIPQWDTVSWNVLISCCIHNRRTRDALRMFDIM-QSTADGFEPDDVTC 274
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
+ L A + G L+ G+ +H Y+ +G D + N+LI MY +CG L++A F R +
Sbjct: 275 LLLLQACANLGALEFGERVHNYIEEHGYDGALNLCNSLITMYSRCGRLEKAYSIFKRMDE 334
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ + SW++MI+ FA+HG +I FE+M Q + PD T +L+AC+H GLV+ G
Sbjct: 335 RNVVSWSAMISGFAMHGYGREAIEAFEQM---QQLGVSPDDQTLTGVLSACSHCGLVDDG 391
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
+F M+K + IEP I HYGC+VDLLGRAG ++A +++ M I+PD +W +LL C+
Sbjct: 392 LMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTLLGACR 451
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
I+ E + LIE+ G ++L NIY +G WD+V +RK +K++ +PGC
Sbjct: 452 IHRHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLRKFMKEKGIQTSPGC 511
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
S IE+ +VH+F D HPRT+EIY+ L+ +
Sbjct: 512 STIELKGKVHEFVVDDILHPRTDEIYEMLDEI 543
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 182/566 (32%), Positives = 296/566 (52%), Gaps = 79/566 (13%)
Query: 15 QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
Q+ A + R + ++L L +F+TT L L+ + +AR F+ T
Sbjct: 35 QIHAFILRHSLHSNLNLLTAFVTTCAS---------LAASAKRPLAIINHARRFFNATHT 85
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP-QPNQFIYPHVLKSCPDVLESRGT 133
+T+L +MI A+ + S F+L+RD+ R+ P P+ + + ++K C + +
Sbjct: 86 RDTFLCNSMIAAHFA-ARQFSQPFTLFRDLRRQAPPFTPDGYTFTALVKGCATRVATGEG 144
Query: 134 KMVHTQIVKSG--FEQY-----------------------------PVVETALVNSYSRS 162
++H ++K+G F+ Y V TA++ Y+R
Sbjct: 145 TLLHGMVLKNGVCFDLYVATALVDMYVKFGVLGSARKVFDEMSVRSKVSWTAVIVGYARC 204
Query: 163 GN------------------------------DIGIARKLFDEMSDRNVVSWTAMISGYT 192
G+ +G+AR+LF+EM +RNVVSWT+M+SGY
Sbjct: 205 GDMSEARRLFDEMEDRDIVAFNAMIDGYVKMGCVGLARELFNEMRERNVVSWTSMVSGYC 264
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
GD++NA +FD MP+++V WN++I G QN DA+ FR M + ++ PN+VT
Sbjct: 265 GNGDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRRSHDALELFREMQ---TASVEPNEVT 321
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
+VC L A+ G L LG+ IH + R LD + I ALIDMY KCG + +A+ AF+ +
Sbjct: 322 VVCVLPAVADLGALDLGRWIHRFALRKKLDRSARIGTALIDMYAKCGEITKAKLAFEGMT 381
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
++ SWN++IN FA++G ++ ++ VF M+ + P+ VT I +L+AC H GLVE+
Sbjct: 382 ERETASWNALINGFAVNGCAKEALEVFARMI---EEGFGPNEVTMIGVLSACNHCGLVEE 438
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
GR +F M + + I PQ+EHYGC+VDLLGRAG +EA +++ M + + ++ S L C
Sbjct: 439 GRRWFNAMER-FGIAPQVEHYGCMVDLLGRAGCLDEAENLIQTMPYDANGIILSSFLFAC 497
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+ AE +K+++++D + G +ML N+Y +W +V V++M+K R K
Sbjct: 498 GYFNDVLRAERVLKEVVKMDEDVAGNYVMLRNLYATRQRWTDVEDVKQMMKKRGTSKEVA 557
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEI 518
CS IE+ +F + D H E I
Sbjct: 558 CSVIEIGGSFIEFAAGDYLHSHLEVI 583
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/494 (34%), Positives = 265/494 (53%), Gaps = 12/494 (2%)
Query: 6 NQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYA 65
N+ Q + ++L +L HL Q+ + G +N V CT L + YA
Sbjct: 2 NKSLQKIESKILHLLHNTKTQTHLPQIHAHFLRHGLHHSNQILSHFVSVCT-SLHQIPYA 60
Query: 66 RFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
IF+H PN L+ ++I A++S P S F + M P+ F +P +LK+
Sbjct: 61 TTIFNHTHHPNILLFNSIIKAHSSFPPFHQS-FHFFNLMKMTHNILPDNFTFPPLLKATS 119
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
+ + + +H + GF ++ VE L+ YS G + A K+FDEM R VV W
Sbjct: 120 YLRDYDLGQCLHAHVTALGFYRHSPVEIGLLEVYSNCGK-MEDANKVFDEMLHREVVVWN 178
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
MI+G+ ++GD++ LF M R V +WN +I+ Q +A FR M +
Sbjct: 179 IMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREM---LEQG 235
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS--NALIDMYGKCGSLKE 303
P+ TLV L G + G+ IH Y GL L IS N+L+D Y KCG+L+
Sbjct: 236 FEPDDATLVTVLPVCARLGDVDAGEWIHSYADGKGL-LRKVISVGNSLVDFYCKCGNLEA 294
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A + F+ +KK + SWN+MI+ L+G+ E + +FE+M R + P TF+ +L
Sbjct: 295 AWKVFNEMTKKNVVSWNAMISGLGLNGKGELGVELFEKMAR---KGVTPSDSTFVGVLAC 351
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C H G V++GR F MT +++ P++EHYGC+VDLLGR G +EA ++++ M + P+
Sbjct: 352 CAHAGFVDKGREIFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAA 411
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+WG+LL+ C+ +G + AE A K+L+ ++P N G ++L+N+Y E KW+EV KVR +++
Sbjct: 412 LWGALLSACRTHGDREVAEIAAKELVRLEPGNSGNYVLLSNVYAEERKWNEVEKVRVLMQ 471
Query: 484 DRNAYKTPGCSWIE 497
K PG S ++
Sbjct: 472 GVGIKKNPGQSALQ 485
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/474 (36%), Positives = 262/474 (55%), Gaps = 32/474 (6%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV- 120
+T AR +F+ + T N + AMI AY + A+ L+ +M + I +V
Sbjct: 249 MTEARNLFNEMPTKNLVSWNAMIGAYVREN-QIDDAYKLFMEMPEKDSVSWTAMINGYVR 307
Query: 121 ---LKSCPDVLESRGTKMVHTQI------VKSG--------FEQYPVVETALVNS----Y 159
L ++L K + Q ++SG F Q V ++ NS Y
Sbjct: 308 VGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGY 367
Query: 160 SRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVI 219
+ G A +LF EM +++VSW MI+ Y + G + A +F+ M +R+V +WNS+I
Sbjct: 368 AHCGR-TDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLI 426
Query: 220 AGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN 279
G QNGL+ +A++ F M + +P+Q T+VC L A + L +G +H +
Sbjct: 427 TGYVQNGLYFEALNCFILMKQQGE---KPDQTTIVCCLRASANLAALNVGVQLHHLTIKT 483
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
G D F+ NA++ MY K G + EA F K + SWNS+I +AL+G + ++ +F
Sbjct: 484 GFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVELF 543
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
E M I PD VTF LL+AC HGG V+QG FK MT+TY I+PQ EHY C+++L
Sbjct: 544 EVM---PLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINL 600
Query: 400 LGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYG 459
LGR GR EEA+E+V+GMK +WG+LL C+I+ + A+++ ++L+ ++P N
Sbjct: 601 LGRVGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNY 660
Query: 460 IMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHP 513
++L+N++ E G+WD V +VR ++K+ A K PGCSWIE+D Q+H F L K P
Sbjct: 661 VLLSNMHAEAGRWDMVERVRVLMKENKAEKQPGCSWIEIDNQLHCF--LSKAPP 712
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 176/424 (41%), Gaps = 109/424 (25%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + + Y +T MIT Y R G+ + + ++ + PD
Sbjct: 99 LFDRMFKRDIYSWTLMITCY-----------------TRIGELEKARELFNLL----PD- 136
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
+Q V AL+ Y++ A+KLFDEM +NVVSW ++
Sbjct: 137 ------------------KQDTVCRNALIAGYAKK-RLFREAKKLFDEMLVKNVVSWNSI 177
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
+SGYT+ G ++ F++M +R+V +WN ++ G G A FF+++
Sbjct: 178 LSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIP-------T 230
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
PN V+ V LS H YG+ + EAR
Sbjct: 231 PNVVSWVTMLSGFAH--------------------------------YGR---MTEARNL 255
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F+ K L SWN+MI ++ Q +++ +F EM D V++ +++N
Sbjct: 256 FNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEM-------PEKDSVSWTAMINGYVRV 308
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
G + Q R LM Y+ I +++ ++GR +EA E+ + + D V W S
Sbjct: 309 GKLLQAREILNLM--PYK---NIAAQTAMINGYLQSGRMDEANEIFSQISVR-DSVCWNS 362
Query: 428 LLNGCKIYGRTD-----FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
++ G GRTD F E K ++ + M+A Y + G+ D+ ++ +
Sbjct: 363 MITGYAHCGRTDEALRLFQEMVCKDMV-------SWNTMIA-AYAQAGQMDKALEMFNEM 414
Query: 483 KDRN 486
++RN
Sbjct: 415 QERN 418
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 161/365 (44%), Gaps = 46/365 (12%)
Query: 148 YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM 207
Y + ++ RSG I A +F +M++RN+V++ +MIS Y + G I NA LFD M
Sbjct: 14 YVFTQNLRISQLGRSGR-IEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLM 72
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
P R++ +WNS+IAG N L DA F RM + + + ++ G L+
Sbjct: 73 PQRNLVSWNSMIAGYLHNELVEDAARLFDRM-------FKRDIYSWTLMITCYTRIGELE 125
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFA 327
+ + + D+ NALI Y K +EA++ FD K + SWNS+++ +
Sbjct: 126 KARELFNLLPDKQ---DTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYT 182
Query: 328 LHGQSENSICVFEEM--MRCQDHNIRPDG----------------------VTFISLLNA 363
+G+ + + FE M N+ DG V+++++L+
Sbjct: 183 KNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSG 242
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
H G + + R F M + + ++ R + ++A ++ M E D V
Sbjct: 243 FAHYGRMTEARNLFNEMPT-----KNLVSWNAMIGAYVRENQIDDAYKLFMEMP-EKDSV 296
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDP-NNGGYGIMLANIYGELGKWDEVRKVRKML 482
W +++NG G+ ++++ + P N + N Y + G+ DE ++ +
Sbjct: 297 SWTAMINGYVRVGKL----LQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQI 352
Query: 483 KDRNA 487
R++
Sbjct: 353 SVRDS 357
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/504 (32%), Positives = 275/504 (54%), Gaps = 18/504 (3%)
Query: 25 HINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMI 84
H L+ S G + YA K L A+ +F L + + ++I
Sbjct: 301 HARILRMEHSLDLVFGNGLIDMYA---------KCGCLDLAKRVFKSLREHDHISWNSLI 351
Query: 85 TAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG 144
T A L+ M RR ++FI P +L C + +++H +KSG
Sbjct: 352 TGVV-HFGLGEDALILFNQM-RRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSG 409
Query: 145 FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLF 204
V A++ Y++ G D A +F M RN +SWTAMI+ ++R GDI A F
Sbjct: 410 MGSSAPVGNAIITMYAKCG-DTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYF 468
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
D MP+R++ WNS+++ QNG + + + M S+ ++P+ +T ++ A
Sbjct: 469 DMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMR---SNGVQPDWITFTTSIRACADLA 525
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
+++LG + + + GL L+ ++N+++ MY +CG +KEA+ FD K L SWN+M+
Sbjct: 526 IVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLA 585
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
+FA +G I FE+M++ + +P+ ++++S+L+ C+H GLV +G+ YF MT+ +
Sbjct: 586 AFAQNGLGIKVIDTFEDMLKTE---CKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVF 642
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
I P EH+ C+VDLLGRAG E+A ++++GM +P+ VW +LL C+++ AE A
Sbjct: 643 GISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETA 702
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
KKL+E+D ++L+N+Y E G+ D V +RK++K + + GCSWIEVD +VH
Sbjct: 703 AKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHV 762
Query: 505 FHSLDKTHPRTEEIYDALESMVAL 528
F + +HP+ +E+Y LE M+ +
Sbjct: 763 FTVDETSHPQIKEVYLKLEEMMKM 786
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 152/311 (48%), Gaps = 13/311 (4%)
Query: 60 SNLTYARFIFDHLTT--PNTYLYTAMITAYASQPAHASSAFSLYRDMVRR---GQPQPNQ 114
S ++ A +FD + ++ +T MI+ Y SQ S +F + M+R G +
Sbjct: 88 SRMSDAEKLFDEMPVRVKDSVSWTTMISGY-SQNGFHSRSFETFSLMIRDTNDGGKNYDP 146
Query: 115 FIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
F + V+K+C + +SR +H + K GF ++ ++V Y + G D+ +A +F
Sbjct: 147 FSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCG-DVDLAETVFF 205
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
++ ++ W +MI GY+++ A +F+ MP+RD +WN++I+ +Q+G ++
Sbjct: 206 DIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAM 265
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
F M + PN +T LSA T L+ G +H + R LD N LIDM
Sbjct: 266 FVEM---CNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDM 322
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KCG L A+R F + SWNS+I G E+++ +F +M R ++ D
Sbjct: 323 YAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRR---SSVVLDE 379
Query: 355 VTFISLLNACT 365
++L C+
Sbjct: 380 FILPTILGVCS 390
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 157/343 (45%), Gaps = 52/343 (15%)
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSG--NDIGIARKLFDEMSDRNVVSWTAMISGY 191
+ +H Q++ SG + + L++ YS G +D A ++F E RN+ +W MI
Sbjct: 28 RKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHD---AFQVFQETHHRNIFTWNTMIRAL 84
Query: 192 TRVGDIKNAASLFDSMPDR--DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD---NI 246
+ +A LFD MP R D +W ++I+G +QNG S + F M + +D N
Sbjct: 85 VSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNY 144
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK---- 302
P T V + A G G +L +H V + G +++ I N+++ MY KCG +
Sbjct: 145 DPFSFTSV--MKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAET 202
Query: 303 ---------------------------EARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
+A + F+R ++ SWN++I+ F+ HG
Sbjct: 203 VFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQC 262
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEH-YG 394
+ +F EM + P+ +T+ S+L+AC ++ G L + R+E ++ +G
Sbjct: 263 LAMFVEMC---NQGFSPNFMTYGSVLSACASTSDLKWGA---HLHARILRMEHSLDLVFG 316
Query: 395 -CLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
L+D+ + G + A V K ++ E D + W SL+ G +G
Sbjct: 317 NGLIDMYAKCGCLDLAKRVFKSLR-EHDHISWNSLITGVVHFG 358
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 267 QLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSF 326
+ + +H + +GLD F+ N L+ MY CG +A + F + + +WN+MI +
Sbjct: 25 HIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRAL 84
Query: 327 ALHGQSENSICVFEEM-MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK 382
+ ++ +F+EM +R + D V++ ++++ + G + F LM +
Sbjct: 85 VSSSRMSDAEKLFDEMPVRVK------DSVSWTTMISGYSQNGFHSRSFETFSLMIR 135
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/489 (32%), Positives = 282/489 (57%), Gaps = 14/489 (2%)
Query: 45 NFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM 104
N Y++ + +K L AR +FD + + + M+ YA Q + A ++++
Sbjct: 112 NLYSWNNMVSGFVKSGMLVRARVVFDSMPERDVVSWNTMVIGYA-QDGNLHEALWFFKEL 170
Query: 105 VRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN 164
RR + N+F + +L +C + + + H Q++ +GF V+ +++++Y++ G
Sbjct: 171 -RRSGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQ 229
Query: 165 DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQ 224
+ A++ FDEM+ +++ WT +ISGY ++GD++ A LF MP+++ +W ++IAG +
Sbjct: 230 -MESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVR 288
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
G A+ FR+M ++ ++P Q T L A L+ GK IHGY+ R + +
Sbjct: 289 QGSGDLALDLFRKM---IAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPN 345
Query: 285 SFISNALIDMYGKCGSLKEARRAFDR-NSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
+ ++++LIDMY K GSL+ + R F K+ WN+MI++ A HG ++ + ++M+
Sbjct: 346 AIVTSSLIDMYSKSGSLEASERVFRICYDKQDCVLWNTMISALAQHGLGHKALQMLDDMI 405
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
+ + H P+ T + +LNAC+H GLVE+G +F+ MT + I P EHY CL+DLLGRA
Sbjct: 406 KFRVH---PNRTTLVVILNACSHSGLVEEGVRWFESMTVQHGIVPDQEHYACLIDLLGRA 462
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLA 463
G F+E + ++ M EPD+ +W ++L C+I+G + + A ++LI++DP + I+L+
Sbjct: 463 GCFKELMSKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAEELIKLDPESSAPYILLS 522
Query: 464 NIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKT----HPRTEEIY 519
+IY + GKW+ V K+R ++K R K SWIE++ +V F D + H R EEIY
Sbjct: 523 SIYADHGKWELVEKLRGIMKKRRVNKEKAVSWIEIENKVKAFTVSDGSHAHAHARKEEIY 582
Query: 520 DALESMVAL 528
L ++ AL
Sbjct: 583 FILHNLAAL 591
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 181/384 (47%), Gaps = 36/384 (9%)
Query: 82 AMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIV 141
++++ +A++ A S A S + ++G P + +L+ C D + K +H +
Sbjct: 16 SLLSRHATK-AELSQAVSRLESLTQQGIRLPFDLL-ASLLQQCGDTKSLKQGKWIHRHLK 73
Query: 142 KSGFEQ-YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
+GF++ ++ L+ Y + G I A K+FD+M RN+ SW M+SG+ + G + A
Sbjct: 74 ITGFKRPNTLLSNHLIGMYMKCGKPID-ACKVFDQMHLRNLYSWNNMVSGFVKSGMLVRA 132
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
+FDSMP+RDV +WN+++ G Q+G +A+ FF+ + I+ N+ + L+A
Sbjct: 133 RVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELR---RSGIKFNEFSFAGLLTAC 189
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
+ LQL + HG V G + +S ++ID Y KCG ++ A+R FD + K + W
Sbjct: 190 VKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWT 249
Query: 321 SMINSFALHGQSENSICVFEEM----------------------------MRCQDHNIRP 352
++I+ +A G E + +F EM + ++P
Sbjct: 250 TLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMRVKP 309
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
+ TF S L A + G+ M +T + P L+D+ ++G E + V
Sbjct: 310 EQFTFSSCLCASASIASLRHGKQIHGYMIRT-NVRPNAIVTSSLIDMYSKSGSLEASERV 368
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYG 436
+ + D V+W ++++ +G
Sbjct: 369 FRICYDKQDCVLWNTMISALAQHG 392
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/474 (36%), Positives = 262/474 (55%), Gaps = 32/474 (6%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV- 120
+T AR +F+ + T N + AMI AY + A+ L+ +M + I +V
Sbjct: 249 MTEARNLFNEMPTKNLVSWNAMIGAYVREN-QIDDAYKLFMEMPEKDSVSWTAMINGYVR 307
Query: 121 ---LKSCPDVLESRGTKMVHTQI------VKSG--------FEQYPVVETALVNS----Y 159
L ++L K + Q ++SG F Q V ++ NS Y
Sbjct: 308 VGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGY 367
Query: 160 SRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVI 219
+ G A +LF EM +++VSW MI+ Y + G + A +F+ M +R+V +WNS+I
Sbjct: 368 AHCGR-TDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLI 426
Query: 220 AGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN 279
G QNGL+ +A++ F M + +P+Q T+VC L A + L +G +H +
Sbjct: 427 TGYVQNGLYFEALNCFILMKQQGE---KPDQTTIVCCLRASANLAALNVGVQLHHLTIKT 483
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
G D F+ NA++ MY K G + EA F K + SWNS+I +AL+G + ++ +F
Sbjct: 484 GFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVELF 543
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
E M I PD VTF LL+AC HGG V+QG FK MT+TY I+PQ EHY C+++L
Sbjct: 544 EVM---PLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINL 600
Query: 400 LGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYG 459
LGR GR EEA+E+V+GMK +WG+LL C+I+ + A+++ ++L+ ++P N
Sbjct: 601 LGRVGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNY 660
Query: 460 IMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHP 513
++L+N++ E G+WD V +VR ++K+ A K PGCSWIE+D Q+H F L K P
Sbjct: 661 VLLSNMHAEAGRWDMVERVRVLMKENKAEKQPGCSWIEIDNQLHCF--LSKAPP 712
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 176/424 (41%), Gaps = 109/424 (25%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + + Y +T MIT Y R G+ + + ++ + PD
Sbjct: 99 LFDRMFKRDIYSWTLMITCY-----------------TRIGELEKARELFNLL----PD- 136
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
+Q V AL+ Y++ A+KLFDEM +NVVSW ++
Sbjct: 137 ------------------KQDTVCRNALIAGYAKK-RLFREAKKLFDEMLVKNVVSWNSI 177
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
+SGYT+ G ++ F++M +R+V +WN ++ G G A FF+++
Sbjct: 178 LSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIP-------T 230
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
PN V+ V LS H YG+ + EAR
Sbjct: 231 PNVVSWVTMLSGFAH--------------------------------YGR---MTEARNL 255
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F+ K L SWN+MI ++ Q +++ +F EM D V++ +++N
Sbjct: 256 FNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEM-------PEKDSVSWTAMINGYVRV 308
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
G + Q R LM Y+ I +++ ++GR +EA E+ + + D V W S
Sbjct: 309 GKLLQAREILNLM--PYK---NIAAQTAMINGYLQSGRMDEANEIFSQISVR-DSVCWNS 362
Query: 428 LLNGCKIYGRTD-----FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
++ G GRTD F E K ++ + M+A Y + G+ D+ ++ +
Sbjct: 363 MITGYAHCGRTDEALRLFQEMVCKDMV-------SWNTMIA-AYAQAGQMDKALEMFNEM 414
Query: 483 KDRN 486
++RN
Sbjct: 415 QERN 418
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 161/365 (44%), Gaps = 46/365 (12%)
Query: 148 YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM 207
Y + ++ RSG I A +F +M++RN+V++ +MIS Y + G I NA LFD M
Sbjct: 14 YVFTQNLRISQLGRSGR-IEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLM 72
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
P R++ +WNS+IAG N L DA F RM + + + ++ G L+
Sbjct: 73 PQRNLVSWNSMIAGYLHNELVEDAARLFDRM-------FKRDIYSWTLMITCYTRIGELE 125
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFA 327
+ + + D+ NALI Y K +EA++ FD K + SWNS+++ +
Sbjct: 126 KARELFNLLPDKQ---DTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYT 182
Query: 328 LHGQSENSICVFEEM--MRCQDHNIRPDG----------------------VTFISLLNA 363
+G+ + + FE M N+ DG V+++++L+
Sbjct: 183 KNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSG 242
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
H G + + R F M + + ++ R + ++A ++ M E D V
Sbjct: 243 FAHYGRMTEARNLFNEMPT-----KNLVSWNAMIGAYVRENQIDDAYKLFMEMP-EKDSV 296
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDP-NNGGYGIMLANIYGELGKWDEVRKVRKML 482
W +++NG G+ ++++ + P N + N Y + G+ DE ++ +
Sbjct: 297 SWTAMINGYVRVGKL----LQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQI 352
Query: 483 KDRNA 487
R++
Sbjct: 353 SVRDS 357
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 189/577 (32%), Positives = 284/577 (49%), Gaps = 79/577 (13%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
++L+ H HL Q+ + L G ++ F K V + + + YAR +FD P+
Sbjct: 76 SLLDHSVHKRHLNQIHAQLVVSGLVESGFLVTKFVN-ASWNIGEIGYARKVFDEFPEPSV 134
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+L+ A+I Y+S A +Y M G P+ F P VLK+C V K VH
Sbjct: 135 FLWNAIIRGYSSHNFFGD-AIEMYSRMQASGV-NPDGFTLPCVLKACSGVPVLEVGKRVH 192
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSG------------NDIGI----------------- 168
QI + GFE V+ LV Y++ G +D I
Sbjct: 193 GQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPM 252
Query: 169 -ARKLFDEMSDRNV-VSWTAMIS------------------------------------- 189
A ++F +M RNV W A++S
Sbjct: 253 EALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLT 312
Query: 190 -GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
Y + G + A S FD M +V WN++I+G +NG ++A+ F+ M +S NIR
Sbjct: 313 AMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEM---ISKNIRT 369
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
+ +T+ A+ A G L L K + Y+ + D F++ ALIDM+ KCGS+ AR F
Sbjct: 370 DSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVF 429
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
DR K + W++MI + LHG+ +++I +F M + + P+ VTF+ LL AC H G
Sbjct: 430 DRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAM---KQAGVCPNDVTFVGLLTACNHSG 486
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
LVE+G F M K Y IE + +HY C+VDLLGR+G EA + + M IEP VWG+L
Sbjct: 487 LVEEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGAL 545
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L CKIY E+A ++L +DP N G+ + L+N+Y WD V KVR +++++
Sbjct: 546 LGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLS 605
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K G S IE++ ++ F DK+HPR +EI++ LES+
Sbjct: 606 KDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESL 642
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 251/461 (54%), Gaps = 41/461 (8%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
R +FD + P+ Y AMI+ Y SA +L+R+++ GQ + + +
Sbjct: 268 GRILFDQIDQPDLISYNAMISGYTFN-HETESAVTLFRELLASGQRVNSSTLVGLIPVYL 326
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
P + ++++ +K G P V TAL
Sbjct: 327 P-FNHLQLSRLIQNLSLKIGIILQPSVSTALT---------------------------- 357
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+ Y R+ +++ A LFD P++ + +WN++I+G TQNGL AIS F+ M ++S
Sbjct: 358 ----TVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLS- 412
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
PN VT+ LSA G L +GK +HG + L+ + ++S AL+DMY KCGS+ EA
Sbjct: 413 ---PNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEA 469
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R+ FD K + +WN+MI + LHG + ++ +F EM++ I P GVTF+S+L AC
Sbjct: 470 RQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQS---GIPPTGVTFLSILYAC 526
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLV +G F M Y +P EHY C+VD+LGRAG+ ALE ++ M +EP V
Sbjct: 527 SHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAV 586
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL C I+ T+ A A K+L ++DP N GY ++L+NIY + + VR+++K
Sbjct: 587 WGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKK 646
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
R KTPGC+ IE+D Q + F S D++HP+ I++ LE +
Sbjct: 647 RKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKL 687
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 192/445 (43%), Gaps = 75/445 (16%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L + + R +F+ ++ P+ +L+ +I ++ SS F LY + + +P+ F Y
Sbjct: 59 LGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIF-LYTHLRKXTNLRPDNFTYA 117
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
+ + + + R ++H + G V +A+V+ Y + +ARK+FD M +
Sbjct: 118 FAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKF-TRAELARKVFDVMPE 176
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAG----------------- 221
R+ V W MISG++R +++ +F M D + ++ +A
Sbjct: 177 RDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGI 236
Query: 222 ---CTQNGLFSDA------ISFFRRMGMEVSDNI-------------------------- 246
++ GL SD IS + + G I
Sbjct: 237 QCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHET 296
Query: 247 ---------------RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
R N TLV + LQL ++I + G+ L +S AL
Sbjct: 297 ESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTAL 356
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIR 351
+Y + ++ AR+ FD + +K L SWN+MI+ + +G ++ +I +F+EMM +
Sbjct: 357 TTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP----QLS 412
Query: 352 PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALE 411
P+ VT S+L+AC G + G+ L+ K+ R+E + LVD+ + G EA +
Sbjct: 413 PNPVTVTSILSACAQLGALSIGKWVHGLI-KSERLESNVYVSTALVDMYAKCGSIVEARQ 471
Query: 412 VVKGMKIEPDEVVWGSLLNGCKIYG 436
+ M ++ + V W +++ G ++G
Sbjct: 472 LFDLM-VDKNVVTWNAMITGYGLHG 495
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 10/213 (4%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+L+ + +AR +FD + + AMI+ Y +Q A SL+++M+ Q PN
Sbjct: 362 RLNEVQFARQLFDESPEKSLASWNAMISGY-TQNGLTDRAISLFQEMM--PQLSPNPVTV 418
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+L +C + K VH I E V TALV+ Y++ G+ + AR+LFD M
Sbjct: 419 TSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVE-ARQLFDLMV 477
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVP----AWNSVIAGCTQNGLFSDAIS 233
D+NVV+W AMI+GY G K A LF M +P + S++ C+ +GL S+
Sbjct: 478 DKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNE 537
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGML 266
F M +P C + +G G L
Sbjct: 538 IFHSMANNY--GFQPMSEHYACMVDILGRAGQL 568
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 94/184 (51%), Gaps = 5/184 (2%)
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
++ S T + + +G + + LF+ + D+ +N +I G + NGL +I F
Sbjct: 45 DLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSI--FLYTH 102
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
+ N+RP+ T A+SA ++G ++H + +G+ + F+ +A++D+Y K
Sbjct: 103 LRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFT 162
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
+ AR+ FD ++ WN+MI+ F+ + E+SI VF +M+ D + D T +
Sbjct: 163 RAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDML---DVGLSFDSTTLAT 219
Query: 360 LLNA 363
+L A
Sbjct: 220 VLTA 223
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 34/166 (20%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K ++ AR +FD + N + AMIT Y H A L+ +M++ G P P +
Sbjct: 462 KCGSIVEARQLFDLMVDKNVVTWNAMITGYGLH-GHGKEALKLFYEMLQSGIP-PTGVTF 519
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+L +C H+ +V G E + ++ N+Y F MS
Sbjct: 520 LSILYACS-----------HSGLVSEGNEIFH----SMANNYG------------FQPMS 552
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA-WNSVIAGC 222
+ + M+ R G + NA + MP PA W +++ C
Sbjct: 553 EH----YACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGAC 594
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/463 (35%), Positives = 257/463 (55%), Gaps = 38/463 (8%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD +T + + AMIT Y + A L+++M+R +P++ V+ +C
Sbjct: 149 ARKVFDEITERDVVSWNAMITGYV-ENGRYEEALELFKEMMRT-NVRPDEGTLVSVVSAC 206
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ VH+ + + +VN
Sbjct: 207 AQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVN--------------------------- 239
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
A+I Y++ GD++ A LF+ + +DV +WN++I G T L+ +A+ F+ M +
Sbjct: 240 -ALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEM---LRS 295
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN--GLDLDSFISNALIDMYGKCGSLK 302
PN VTL+ L A H G + +G+ IH Y+ + G+ ++ + +LIDMY KCG ++
Sbjct: 296 GECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIE 355
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
A + F+ + L+SWN+MI FA+HG++ + +F M + + + PD +TF+ LL+
Sbjct: 356 AAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRM---RGNRVEPDDITFVGLLS 412
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H GL++ GR FK MT+ Y + P++EHYGC++DLLG +G F+EA E++ M +EPD
Sbjct: 413 ACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDG 472
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
V+W SLL CK +G + AE +KLI+I+P N G ++L+NIY G+W++V +VR +L
Sbjct: 473 VIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVL 532
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ K PGCS IEVD VH+F DK HPR EIY LE M
Sbjct: 533 NGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEM 575
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 137/472 (29%), Positives = 235/472 (49%), Gaps = 54/472 (11%)
Query: 51 LVRFCTLK--LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRG 108
L+ C + L YA +F+ + PN ++ M+ +AS + SA +Y MV G
Sbjct: 1 LLELCVVSPHFDGLPYAISVFETIQEPNLLIWNTMLRGHASS-SDPVSALEMYVRMVSLG 59
Query: 109 QPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGI 168
PN + +P +LKSC + +H Q++K G V T+L++ Y+R+G +
Sbjct: 60 H-LPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGG-LED 117
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
ARK+FD S R+VVS TA+I+GY GD ++A +FD + +RDV +WN++I G +NG +
Sbjct: 118 ARKVFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRY 177
Query: 229 SDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV----YRNGLDLD 284
+A+ F+ M + N+RP++ TLV +SA +G ++LG+ +H +V +G
Sbjct: 178 EEALELFKEM---MRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSS 234
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
I NALID+Y KCG ++ A F+ S K + SWN++I + + ++ +F+EM+R
Sbjct: 235 LKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLR 294
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR-IEPQIEHYGCLVDLLGRA 403
+ P+ VT +S+L AC H G ++ GR + K + + + L+D+ +
Sbjct: 295 SGEC---PNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKC 351
Query: 404 GRFEEALEV----------------------------------VKGMKIEPDEVVWGSLL 429
G E A +V ++G ++EPD++ + LL
Sbjct: 352 GDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLL 411
Query: 430 NGCKIYGRTDFAEFAVKKLIE---IDPNNGGYGIMLANIYGELGKWDEVRKV 478
+ C G D K + + + P YG M+ ++ G G + E ++
Sbjct: 412 SACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMI-DLLGHSGLFKEAEEM 462
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/455 (37%), Positives = 258/455 (56%), Gaps = 13/455 (2%)
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
T+ T +T+ IT ++ + A + DM R +PN + +L C D
Sbjct: 23 TSETTVSWTSRITLL-TRNGRLAEAAKXFSDM-RLSGVEPNHITFIALLSGCGDFPSGSE 80
Query: 133 T--KMVHTQIVKSGFEQYPV-VETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
T ++H K G ++ V V TA++ YS+ G+ + AR +FD M D N V+W MI
Sbjct: 81 TLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGH-VKKARLVFDYMEDINSVTWNTMID 139
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GY R G + NA +FD MP+RD+ +W ++I G + G +A+ +FR M + +RP+
Sbjct: 140 GYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQIS---GVRPD 196
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
V ++ AL+A + G L G +H YV + +SN+LID+Y +CG ++ AR FD
Sbjct: 197 YVAIIAALNACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFD 256
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
+ K+ + SWNS+I FA +G + S+ F +M Q+ +PD VTF L AC+H GL
Sbjct: 257 KMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM---QEEGFKPDAVTFTGALTACSHVGL 313
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
VE+G YF+ M + Y I P+IEHYGCLVDL RAGR E+AL+V++ M ++P+EVV GSLL
Sbjct: 314 VEEGLRYFQTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALKVIESMPMKPNEVVIGSLL 373
Query: 430 NGCKIYG-RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
C+ +G T AE +K L +++ + ++L+N+Y GKW+ ++R+ +K
Sbjct: 374 AACRTHGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADGKWEGASQMRRKMKGLGLK 433
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K PG S IE+D H F + D H T I + LE
Sbjct: 434 KQPGFSSIEIDDCTHVFMAGDSAHVETAIIREVLE 468
>gi|15225365|ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546766|sp|Q1PEU4.2|PP201_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g44880
gi|2344896|gb|AAC31836.1| hypothetical protein [Arabidopsis thaliana]
gi|330255385|gb|AEC10479.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 285/547 (52%), Gaps = 71/547 (12%)
Query: 43 QTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT-PNTYLYTAMITAYASQPAHASSAFSLY 101
+TN F + + YAR +FD +++L +MI AY + S F+LY
Sbjct: 7 ETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDS-FALY 65
Query: 102 RDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQI--------------------- 140
RD+ + P+ F + + KSC + +H+QI
Sbjct: 66 RDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAK 125
Query: 141 ------VKSGFEQYP----VVETALVNSYSRSGN-------------------------- 164
++ F++ P V TAL++ Y R G
Sbjct: 126 FGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDG 185
Query: 165 -----DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVI 219
D+ AR+LFDEM+ + V++WT MI GY + DI A LFD+MP+R++ +WN++I
Sbjct: 186 FVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMI 245
Query: 220 AGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN 279
G QN + I F+ M + + ++ P+ VT++ L AI TG L LG+ H +V R
Sbjct: 246 GGYCQNKQPQEGIRLFQEM--QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRK 303
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
LD + A++DMY KCG +++A+R FD +K++ SWN+MI+ +AL+G + ++ +F
Sbjct: 304 KLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLF 363
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
MM + +PD +T ++++ AC HGGLVE+GR +F +M + + +IEHYGC+VDL
Sbjct: 364 VTMMIEE----KPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDL 418
Query: 400 LGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYG 459
LGRAG +EA +++ M EP+ ++ S L+ C Y + AE +KK +E++P N G
Sbjct: 419 LGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNY 478
Query: 460 IMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
++L N+Y +WD+ V+ +++ A K GCS IE++ V +F S D THP I+
Sbjct: 479 VLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIH 538
Query: 520 DALESMV 526
L ++
Sbjct: 539 LVLGDLL 545
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 251/461 (54%), Gaps = 41/461 (8%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
R +FD + P+ Y AMI+ Y SA +L+R+++ GQ + + +
Sbjct: 268 GRILFDQIDQPDLISYNAMISGYTFN-HETESAVTLFRELLASGQRVNSSTLVGLIPVYL 326
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
P + ++++ +K G P V TAL
Sbjct: 327 P-FNHLQLSRLIQNLSLKIGIILQPSVSTALT---------------------------- 357
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+ Y R+ +++ A LFD P++ + +WN++I+G TQNGL AIS F+ M ++S
Sbjct: 358 ----TVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLS- 412
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
PN VT+ LSA G L +GK +HG + L+ + ++S AL+DMY KCGS+ EA
Sbjct: 413 ---PNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEA 469
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R+ FD K + +WN+MI + LHG + ++ +F EM++ I P GVTF+S+L AC
Sbjct: 470 RQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQS---GIPPTGVTFLSILYAC 526
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLV +G F M Y +P EHY C+VD+LGRAG+ ALE ++ M +EP V
Sbjct: 527 SHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAV 586
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL C I+ T+ A A K+L ++DP N GY ++L+NIY + + VR+++K
Sbjct: 587 WGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKK 646
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
R KTPGC+ IE+D Q + F S D++HP+ I++ LE +
Sbjct: 647 RKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKL 687
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 193/445 (43%), Gaps = 75/445 (16%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L + + R +F+ ++ P+ +L+ +I ++ SS F LY + ++ +P+ F Y
Sbjct: 59 LGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIF-LYTHLRKKTNLRPDNFTYA 117
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
+ + + + R ++H + G V +A+V+ Y + +ARK+FD M +
Sbjct: 118 FAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKF-TRAELARKVFDVMPE 176
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAG----------------- 221
R+ V W MISG++R +++ +F M D + ++ +A
Sbjct: 177 RDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGI 236
Query: 222 ---CTQNGLFSDA------ISFFRRMGMEVSDNI-------------------------- 246
++ GL SD IS + + G I
Sbjct: 237 QCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHET 296
Query: 247 ---------------RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
R N TLV + LQL ++I + G+ L +S AL
Sbjct: 297 ESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTAL 356
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIR 351
+Y + ++ AR+ FD + +K L SWN+MI+ + +G ++ +I +F+EMM +
Sbjct: 357 TTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP----QLS 412
Query: 352 PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALE 411
P+ VT S+L+AC G + G+ L+ K+ R+E + LVD+ + G EA +
Sbjct: 413 PNPVTVTSILSACAQLGALSIGKWVHGLI-KSERLESNVYVSTALVDMYAKCGSIVEARQ 471
Query: 412 VVKGMKIEPDEVVWGSLLNGCKIYG 436
+ M ++ + V W +++ G ++G
Sbjct: 472 LFDLM-VDKNVVTWNAMITGYGLHG 495
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 10/213 (4%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+L+ + +AR +FD + + AMI+ Y +Q A SL+++M+ Q PN
Sbjct: 362 RLNEVQFARQLFDESPEKSLASWNAMISGY-TQNGLTDRAISLFQEMM--PQLSPNPVTV 418
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+L +C + K VH I E V TALV+ Y++ G+ + AR+LFD M
Sbjct: 419 TSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVE-ARQLFDLMV 477
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVP----AWNSVIAGCTQNGLFSDAIS 233
D+NVV+W AMI+GY G K A LF M +P + S++ C+ +GL S+
Sbjct: 478 DKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNE 537
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGML 266
F M +P C + +G G L
Sbjct: 538 IFHSMANNY--GFQPMSEHYACMVDILGRAGQL 568
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 95/184 (51%), Gaps = 5/184 (2%)
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
++ S T + + +G + + LF+ + D+ +N +I G + NGL +I + +
Sbjct: 45 DLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLR 104
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
+ N+RP+ T A+SA ++G ++H + +G+ + F+ +A++D+Y K
Sbjct: 105 KKT--NLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFT 162
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
+ AR+ FD ++ WN+MI+ F+ + E+SI VF +M+ D + D T +
Sbjct: 163 RAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDML---DVGLSFDSTTLAT 219
Query: 360 LLNA 363
+L A
Sbjct: 220 VLTA 223
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 34/166 (20%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K ++ AR +FD + N + AMIT Y H A L+ +M++ G P P +
Sbjct: 462 KCGSIVEARQLFDLMVDKNVVTWNAMITGYGLH-GHGKEALKLFYEMLQSGIP-PTGVTF 519
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+L +C H+ +V G E + ++ N+Y F MS
Sbjct: 520 LSILYACS-----------HSGLVSEGNEIFH----SMANNYG------------FQPMS 552
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA-WNSVIAGC 222
+ + M+ R G + NA + MP PA W +++ C
Sbjct: 553 EH----YACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGAC 594
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/474 (35%), Positives = 256/474 (54%), Gaps = 17/474 (3%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
+L AR + D LT P + AMI+ Y + + AF +R M G Q +++ Y +
Sbjct: 232 DLVAARELLDGLTYPIDVAWNAMISGYVRRGLY-EEAFDTFRRMHSMG-IQEDEYTYTSL 289
Query: 121 LKSCPDVLESRGT----KMVHTQIVKSGFEQ----YPVVETALVNSYSRSGNDIGIARKL 172
+ +C E G + VH I+++ E V AL+ Y++ I AR++
Sbjct: 290 ISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIE-ARRV 348
Query: 173 FDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAI 232
FD+M R+++SW A++SGY I+ A S+F MP+R+V W +I+G QNG + +
Sbjct: 349 FDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGL 408
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALI 292
F +M S+ + P A++A G L G+ IH V R G D NALI
Sbjct: 409 KLFNQMK---SEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALI 465
Query: 293 DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
MY +CG ++ A F SWN+MI + A HG +I +FE+MM+ +I P
Sbjct: 466 TMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMK---EDILP 522
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
D +TF+++L AC H GL+++GR YF M Y I P +HY L+DLL RAG F +A V
Sbjct: 523 DRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSV 582
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKW 472
+K M E +W +LL GC+I+G + A +L+E+ P G I+L+N+Y LG+W
Sbjct: 583 IKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQW 642
Query: 473 DEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
DEV +VR ++++R K PGCSW+EV+ VH F D HP + +Y L+ +V
Sbjct: 643 DEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQQLV 696
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 195/435 (44%), Gaps = 79/435 (18%)
Query: 7 QLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYA 65
QLN Q++A + + + + T G F +L+ +C K SN+TYA
Sbjct: 13 QLNHVSTTQIIA-----------RAVHAHILTSGFKPNTFILNRLINIYC--KSSNITYA 59
Query: 66 RFIFDHLTTPN---------------------------------TYLYTAMITAYASQPA 92
R +FD + P+ T Y AMITAY S
Sbjct: 60 RKLFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAY-SHGN 118
Query: 93 HASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL-ESRGTKMVHTQIVKSGFEQYPVV 151
+A +L+ M R G P+ F + VL + + E R +M+H +++K G P V
Sbjct: 119 DGHAALNLFVQMKRYGF-LPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSV 177
Query: 152 ETALVNSYS--------RSGNDIGIARKLFDEMSDRNVV--SWTAMISGYTRVGDIKNAA 201
AL++ Y +S + ARK+FDE + SWT MI+GY R D+ A
Sbjct: 178 TNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAAR 237
Query: 202 SLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIG 261
L D + AWN++I+G + GL+ +A FRRM S I+ ++ T +SA G
Sbjct: 238 ELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMH---SMGIQEDEYTYTSLISACG 294
Query: 262 ----HTGMLQLGKVIHGYVYRNGLDLDSF----ISNALIDMYGKCGSLKEARRAFDRNSK 313
GM G+ +HGY+ R ++ ++NALI Y K + EARR FD+
Sbjct: 295 SCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPV 354
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ + SWN++++ + + E + +F EM + N+ +T+ +++ G E+G
Sbjct: 355 RDIISWNAVLSGYVNAQRIEEANSIFSEM---PERNV----LTWTVMISGLAQNGFGEEG 407
Query: 374 RAYFKLMTKTYRIEP 388
F M K+ +EP
Sbjct: 408 LKLFNQM-KSEGLEP 421
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 72/143 (50%), Gaps = 16/143 (11%)
Query: 257 LSAIGHTGMLQL-GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
L+ + H Q+ + +H ++ +G ++FI N LI++Y K ++ AR+ FD+ K
Sbjct: 11 LTQLNHVSTTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPD 70
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
+ + +++++++ S ++ + +++ IR D V++ +++ A +HG G A
Sbjct: 71 IVARTTLLSAYS----SSGNVKLAQQLFNATPLTIR-DTVSYNAMITAYSHGN---DGHA 122
Query: 376 YFKLMTKTYRIEPQIEHYGCLVD 398
L Q++ YG L D
Sbjct: 123 ALNLFV-------QMKRYGFLPD 138
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/473 (35%), Positives = 262/473 (55%), Gaps = 42/473 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
KL LT A ++F + + + ++I+A Q ++A L+ M+ G
Sbjct: 215 KLGMLTEAHWVFGGMALRDLVTWNSIISA-NEQGGKVAAAVELFHGMMESG--------- 264
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSY-SRSGNDIGIARKLFDEM 176
CPDVL + + + + G E + V+ Y R G D+G
Sbjct: 265 -----VCPDVLT---LVSLASAVAQCGDE----LGAKSVHCYVRRRGWDVG--------- 303
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
++++ AM+ Y ++ I A +FD++PDRDV +WN++I G QNGL ++AI +
Sbjct: 304 ---DIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYN 360
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M + ++P Q T V L A + G LQ G +H + GL+LD +++ LID+Y
Sbjct: 361 DM--HNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYA 418
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG L EA F+ ++ WN++I +HG ++ +F +M Q I+PD VT
Sbjct: 419 KCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQM---QQEEIKPDHVT 475
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
F+SLL AC+H GLV+QGR++F LM Y I P +HY C+VD+LGRAG+ +EA E ++ M
Sbjct: 476 FVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSM 535
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
I+PD VWG+LL C+I+G + + A + L E+DP N GY ++++N+Y ++GKWD V
Sbjct: 536 PIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVD 595
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKT--HPRTEEIYDALESMVA 527
VR +++ +N KTPG S +EV V F+S +T HP+ EEI L ++A
Sbjct: 596 AVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLA 648
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 134/267 (50%), Gaps = 10/267 (3%)
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
NV + +++ Y R G + A +FD MP+RDVPAWN++++G +N +DA++ RM
Sbjct: 101 NVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRM- 159
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
V + + + VTL L G L V+H Y ++GL + F+ NALID+YGK G
Sbjct: 160 --VGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLG 217
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
L EA F + + L +WNS+I++ G+ ++ +F MM + + PD +T +S
Sbjct: 218 MLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMM---ESGVCPDVLTLVS 274
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
L +A G ++ + + I +VD+ + + + A +V + +
Sbjct: 275 LASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLP-D 333
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVK 446
D V W +L+ G Y + A A++
Sbjct: 334 RDVVSWNTLITG---YMQNGLANEAIR 357
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/470 (34%), Positives = 261/470 (55%), Gaps = 42/470 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K +L AR +FD + N + +MI AY Q + A +++ M+ G +P
Sbjct: 283 KCGSLKTARLLFDGMLERNVVSWNSMIDAYV-QNENPKEAMVIFQKMLDEG-VKPTDVSV 340
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
L +C D+ + + +H KL E+
Sbjct: 341 MGALHACADLGDLERGRFIH---------------------------------KLSVELE 367
Query: 178 -DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
DRNV ++IS Y + ++ AAS+F + R + +WN++I G QNG +A+++F
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFS 427
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+M + ++P+ T V ++AI + K IHG V RN LD + F++ AL+DMY
Sbjct: 428 QMQ---ARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYA 484
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG++ AR FD S++ +T+WN+MI+ + HG + ++ +FEEM Q IRP+GVT
Sbjct: 485 KCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEM---QKGTIRPNGVT 541
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
F+S+++AC+H GLVE G F +M + Y IEP ++HYG +VDLLGRAGR EA + + M
Sbjct: 542 FLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQM 601
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
++P V+G++L C+I+ +FAE ++L E++P +GGY ++LANIY W++V
Sbjct: 602 PVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVG 661
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+VR + + KTPGCS +E+ +VH F S HP +++IY LE ++
Sbjct: 662 QVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLI 711
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 180/362 (49%), Gaps = 43/362 (11%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDHLTTPNT 77
+LERC+ + L+ + + G Q + + KLV FC + ++ A +F+ +
Sbjct: 43 LLERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFC--RYGSVDEAARVFEPIDKKLN 100
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
LY M+ +A + + A + M R + +P + + ++LK C D E R K +H
Sbjct: 101 VLYYTMLKGFA-KVSDLDKALKFFVRM-RDDEVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
+VKSGF T L N Y++ +
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQ--------------------------------V 186
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
A +FD MP+RD+ +WN+++AG +QNG+ A+ M +N++P+ +T+V L
Sbjct: 187 HEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLM---CEENLKPSFITIVSVL 243
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
A+ ++++GK IHGY R G D I+ AL+DMY KCGSLK AR FD ++ +
Sbjct: 244 PAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVV 303
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
SWNSMI+++ + + ++ +F++M+ D ++P V+ + L+AC G +E+GR
Sbjct: 304 SWNSMIDAYVQNENPKEAMVIFQKML---DEGVKPTDVSVMGALHACADLGDLERGRFIH 360
Query: 378 KL 379
KL
Sbjct: 361 KL 362
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 202/486 (41%), Gaps = 88/486 (18%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
K++ L G S + +A + K + AR +FD + + + ++ Y S
Sbjct: 155 KEIHGLLVKSGFS-LDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGY-S 212
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
Q A A + M +P+ VL + + R K +H +++GF+
Sbjct: 213 QNGMARMALEMVNLMCEENL-KPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLV 271
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
+ TALV+ Y++ G +K A LFD M +
Sbjct: 272 NIATALVDMYAKC--------------------------------GSLKTARLLFDGMLE 299
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
R+V +WNS+I QN +A+ F++M + + ++P V+++ AL A G L+ G
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMVIFQKM---LDEGVKPTDVSVMGALHACADLGDLERG 356
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
+ IH LD + + N+LI MY KC + A F + + + SWN+MI FA +
Sbjct: 357 RFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQN 416
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT-----------HG----------- 367
G+ ++ F +M Q ++PD T++S++ A HG
Sbjct: 417 GRPIEALNYFSQM---QARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNV 473
Query: 368 -------------GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
G + R F +M+ E + + ++D G G + ALE+ +
Sbjct: 474 FVTTALVDMYAKCGAIMIARLIFDMMS-----ERHVTTWNAMIDGYGTHGIGKAALELFE 528
Query: 415 GMK---IEPDEVVWGSLLNGCKIYGRTDFAE---FAVKKLIEIDPNNGGYGIMLANIYGE 468
M+ I P+ V + S+++ C G + +K+ I+P+ YG M+ ++ G
Sbjct: 529 EMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMV-DLLGR 587
Query: 469 LGKWDE 474
G+ +E
Sbjct: 588 AGRLNE 593
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 121/247 (48%), Gaps = 8/247 (3%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T ++S + R G + AA +F+ + + + +++ G + A+ FF RM D
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMR---DD 129
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ P L G L++GK IHG + ++G LD F L +MY KC + EA
Sbjct: 130 EVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEA 189
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R+ FDR ++ L SWN+++ ++ +G + ++ + M C++ N++P +T +S+L A
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLM--CEE-NLKPSFITIVSVLPAV 246
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+ L+ G+ + + + LVD+ + G + A + GM +E + V
Sbjct: 247 SALRLIRIGKEIHGYAMRA-GFDSLVNIATALVDMYAKCGSLKTARLLFDGM-LERNVVS 304
Query: 425 WGSLLNG 431
W S+++
Sbjct: 305 WNSMIDA 311
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 8/171 (4%)
Query: 276 VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
+++NGL + L+ ++ + GS+ EA R F+ KK + +M+ FA + +
Sbjct: 60 IFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKA 119
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ F +R +D + P F LL C + G+ L+ K+ G
Sbjct: 120 LKFF---VRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTG- 175
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
L ++ + + EA +V M E D V W +++ G Y + A A++
Sbjct: 176 LENMYAKCRQVHEARKVFDRMP-ERDLVSWNTIVAG---YSQNGMARMALE 222
>gi|125582503|gb|EAZ23434.1| hypothetical protein OsJ_07125 [Oryza sativa Japonica Group]
Length = 596
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/461 (35%), Positives = 259/461 (56%), Gaps = 20/461 (4%)
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVR-RGQPQP----NQFIYPHVLKSCPDVLES 130
N Y +I++ A S A ++ + R RG Q ++F +C + ++
Sbjct: 128 NVVSYNTVISSLARH-GRESEALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDA 186
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
R + +H +V SG E ++ A+V++YS++G + AR +FD+M+ R+ VSWT+MI+G
Sbjct: 187 RHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGR-VEDARGVFDQMTIRDSVSWTSMIAG 245
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y R + +A +FD MP +D AW ++I+G QNG A+ F RM + + P
Sbjct: 246 YCRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERM---TGEGVVPTP 302
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSF---ISNALIDMYGKCGSLKEARRA 307
LV L A G++ GK +HG++ R + D F I NALIDMY KCG + A
Sbjct: 303 FALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAV 362
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FDR ++ + SWNSM+ F+ +GQ + S+ VFE M++ + ++P VTF+++L AC+H
Sbjct: 363 FDRMLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDE---VQPTYVTFLAVLTACSHA 419
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM--KIEPDEV-V 424
GLV GR + M + + +EP+ EHY +D LGR + EEA E +KG+ KI
Sbjct: 420 GLVSDGRRILESM-QDHGVEPRAEHYAAFIDALGRNRQLEEASEFIKGLSSKIGLGTTGS 478
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL C ++G + AE + L +++P N G +ML+NIY G+WD+ R+VR ++K
Sbjct: 479 WGALLGACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKG 538
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ K SWIEV + H F + D +H EIY+ L+ +
Sbjct: 539 KGLRKDQAYSWIEVQRAKHMFVADDTSHHEANEIYEMLDKL 579
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 131/311 (42%), Gaps = 63/311 (20%)
Query: 154 ALVNSYSRSGNDIGIARKLFDEM--SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRD 211
+L+ + +R + A +L D M + RNVVS+ +IS R G A +F + RD
Sbjct: 100 SLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLA-RD 158
Query: 212 VPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKV 271
R +G + + ++ T+V A SA + +
Sbjct: 159 ------------------------RGLGQQ---QVAIDRFTVVSAASACAGLRDARHLRE 191
Query: 272 IHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
+HG V +G+++ ++NA++D Y K G +++AR FD+ + + SW SMI +
Sbjct: 192 LHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASM 251
Query: 332 SENSICVFEEMMRCQD-----------------------------HNIRPDGVTFISLLN 362
++++ VF +MM QD + P +S L
Sbjct: 252 LDDAVQVF-DMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLG 310
Query: 363 ACTHGGLVEQGRAYFK-LMTKTYRIEP-QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
AC GLV +G+ ++ ++ +P + + L+D+ + G A+ V M +E
Sbjct: 311 ACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRM-LER 369
Query: 421 DEVVWGSLLNG 431
D + W S++ G
Sbjct: 370 DIISWNSMVTG 380
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 90/236 (38%), Gaps = 64/236 (27%)
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC-------------------- 298
AI + +LG +H + + L + +SN L+ +Y
Sbjct: 38 AISAGDVRRLGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLPHKNAHS 97
Query: 299 ------------GSLKEARRAFD--RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
G+L +A R D + + + S+N++I+S A HG+ ++ VF ++ R
Sbjct: 98 YNSLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLAR 157
Query: 345 CQ---DHNIRPDGVTFISLLNACT-----------HGGLVEQGRAYFKLMTKTYRIEPQI 390
+ + D T +S +AC HG +V G +M
Sbjct: 158 DRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMAN-------- 209
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
+VD +AGR E+A V M I D V W S++ G Y R + AV+
Sbjct: 210 ----AMVDAYSKAGRVEDARGVFDQMTIR-DSVSWTSMIAG---YCRASMLDDAVQ 257
>gi|347954496|gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
Length = 489
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/459 (37%), Positives = 262/459 (57%), Gaps = 21/459 (4%)
Query: 73 TTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
T+ +T+ IT + A A+ FS DM R +PN + +L C D S
Sbjct: 21 TSETIVSWTSRITLLTRNGRLAEAAKEFS---DM-RLAGVEPNHITFIALLSGCGDF--S 74
Query: 131 RGTK----MVHTQIVKSGFEQYPV-VETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
G++ ++H K G ++ V V TA++ YS+ + AR +FD M D+N V+W
Sbjct: 75 SGSEALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSR-VKKARLVFDYMEDKNSVTWN 133
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
MI GY R G + NA +FD MP+RD+ +W ++I G + G +A+++FR M +
Sbjct: 134 TMIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQIS---G 190
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
++P+ V ++ AL+A + G L G +H YV + +SN+LID+Y +CG ++ AR
Sbjct: 191 VKPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAR 250
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
FD+ K+ + SWNS+I FA +G + S+ F +M Q+ +PD VTF L AC+
Sbjct: 251 EVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM---QEEGFKPDAVTFTGALTACS 307
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
H GLVE+G YF+ M + +RI P+IEHYGCLVDL RAGR EEAL+VV+ M ++P+EVV
Sbjct: 308 HVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEEALKVVQSMPMKPNEVVI 367
Query: 426 GSLLNGCKIYG-RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
GSLL C+ +G T AE +K L +++ ++L+N+Y GKW+ ++R+ +K
Sbjct: 368 GSLLAACRTHGNNTVLAERLMKHLSDVNVKGHSNYVILSNMYAADGKWEGASQMRRKMKG 427
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K PG S IE+D H F + D H T +I + LE
Sbjct: 428 LGLKKQPGFSSIEIDDCTHVFMAGDSAHVETADIREVLE 466
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 125/292 (42%), Gaps = 71/292 (24%)
Query: 173 FDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAI 232
++ + +VSWT+ I+ TR G + AA F M
Sbjct: 17 LNQSTSETIVSWTSRITLLTRNGRLAEAAKEFSDM------------------------- 51
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIG--HTGMLQLGKVIHGYVYRNGLD-LDSFISN 289
R G+E PN +T + LS G +G LG ++HGY + G D +
Sbjct: 52 ---RLAGVE------PNHITFIALLSGCGDFSSGSEALGDLLHGYACKLGHDRTHVMVGT 102
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM------- 342
A++ MY K +K+AR FD K +WN+MI+ + +GQ +N++ +F++M
Sbjct: 103 AILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMIDGYMRNGQVDNAVKMFDKMPERDLIS 162
Query: 343 ---------------------MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK-LM 380
Q ++PD V I+ LNACT+ G + G + +M
Sbjct: 163 WTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVM 222
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV-WGSLLNG 431
++ ++ ++ + L+DL R G E A EV K+E VV W S++ G
Sbjct: 223 SQDFKNNVKVSN--SLIDLYCRCGCVEFAREVFD--KMEKRTVVSWNSVIVG 270
>gi|115446683|ref|NP_001047121.1| Os02g0555100 [Oryza sativa Japonica Group]
gi|113536652|dbj|BAF09035.1| Os02g0555100 [Oryza sativa Japonica Group]
Length = 596
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/461 (35%), Positives = 259/461 (56%), Gaps = 20/461 (4%)
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVR-RGQPQP----NQFIYPHVLKSCPDVLES 130
N Y +I++ A S A ++ + R RG Q ++F +C + ++
Sbjct: 128 NVVSYNTVISSLARH-GRESEALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDA 186
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
R + +H +V SG E ++ A+V++YS++G + AR +FD+M+ R+ VSWT+MI+G
Sbjct: 187 RHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGR-VEDARGVFDQMTIRDSVSWTSMIAG 245
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y R + +A +FD MP +D AW ++I+G QNG A+ F RM + + P
Sbjct: 246 YCRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERM---TGEGVVPTP 302
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSF---ISNALIDMYGKCGSLKEARRA 307
LV L A G++ GK +HG++ R + D F I NALIDMY KCG + A
Sbjct: 303 FALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAV 362
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FDR ++ + SWNSM+ F+ +GQ + S+ VFE M++ + ++P VTF+++L AC+H
Sbjct: 363 FDRMLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDE---VQPTYVTFLAVLTACSHA 419
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM--KIEPDEV-V 424
GLV GR + M + + +EP+ EHY +D LGR + EEA E +KG+ KI
Sbjct: 420 GLVSDGRRILESM-QDHGVEPRAEHYAAFIDALGRNRQLEEASEFIKGLSSKIGLGTTGS 478
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL C ++G + AE + L +++P N G +ML+NIY G+WD+ R+VR ++K
Sbjct: 479 WGALLGACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKG 538
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ K SWIEV + H F + D +H EIY+ L+ +
Sbjct: 539 KGLRKDQAYSWIEVQRAKHMFVADDTSHHEANEIYEMLDKL 579
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 131/311 (42%), Gaps = 63/311 (20%)
Query: 154 ALVNSYSRSGNDIGIARKLFDEM--SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRD 211
+L+ + +R + A +L D M + RNVVS+ +IS R G A +F + RD
Sbjct: 100 SLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLA-RD 158
Query: 212 VPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKV 271
R +G + + ++ T+V A SA + +
Sbjct: 159 ------------------------RGLGQQ---QVAIDRFTVVSAASACAGLRDARHLRE 191
Query: 272 IHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
+HG V +G+++ ++NA++D Y K G +++AR FD+ + + SW SMI +
Sbjct: 192 LHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASM 251
Query: 332 SENSICVFEEMMRCQD-----------------------------HNIRPDGVTFISLLN 362
++++ VF +MM QD + P +S L
Sbjct: 252 LDDAVQVF-DMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLG 310
Query: 363 ACTHGGLVEQGRAYFK-LMTKTYRIEP-QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
AC GLV +G+ ++ ++ +P + + L+D+ + G A+ V M +E
Sbjct: 311 ACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRM-LER 369
Query: 421 DEVVWGSLLNG 431
D + W S++ G
Sbjct: 370 DIISWNSMVTG 380
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 90/236 (38%), Gaps = 64/236 (27%)
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC-------------------- 298
AI + +LG +H + + L + +SN L+ +Y
Sbjct: 38 AISAGDVRRLGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLPHKNAHS 97
Query: 299 ------------GSLKEARRAFD--RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
G+L +A R D + + + S+N++I+S A HG+ ++ VF ++ R
Sbjct: 98 YNSLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLAR 157
Query: 345 CQ---DHNIRPDGVTFISLLNACT-----------HGGLVEQGRAYFKLMTKTYRIEPQI 390
+ + D T +S +AC HG +V G +M
Sbjct: 158 DRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMAN-------- 209
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
+VD +AGR E+A V M I D V W S++ G Y R + AV+
Sbjct: 210 ----AMVDAYSKAGRVEDARGVFDQMTIR-DSVSWTSMIAG---YCRASMLDDAVQ 257
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/520 (33%), Positives = 274/520 (52%), Gaps = 62/520 (11%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYR--------------DMVRR 107
++ AR +FD + N +T+M+ Y + + +R ++
Sbjct: 94 ISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIED 153
Query: 108 GQPQPNQFIYPHVLKSCPDVLESRGTKMV-------HTQIVKSGFEQYP----VVETALV 156
G+ + ++ + DV+ S T M+ + F++ P V T+++
Sbjct: 154 GRVDEARRLFDMI--PVKDVVAS--TNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMI 209
Query: 157 NSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWN 216
+ Y+ + N + +ARKLF+ M D+N V+WTAM+ GYTR G I AA LF +MP + V A N
Sbjct: 210 SGYAMN-NKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACN 268
Query: 217 SVIAGCTQNG------------------LFSDAISFFRRMGMEVS----------DNIRP 248
+I G NG +S I + R G E+ + +RP
Sbjct: 269 GMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRP 328
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
N +++ LS G L G+ +H + R+ DLD ++S+ LI MY KCG L +R F
Sbjct: 329 NFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVF 388
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
DR S K + WNS+I +A HG E ++ VF EM PD +TFI +L+AC + G
Sbjct: 389 DRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMF---SSGAAPDEITFIGVLSACGYTG 445
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
V++G F+ M Y+++ + EHY C+VDLLGRAG+ EA+ +++ M +E D +VWG+L
Sbjct: 446 KVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGAL 505
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L+ C+ + D AE A KKL++++P++ G I+L+N+Y +W +V ++RK ++ RN
Sbjct: 506 LSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVS 565
Query: 489 KTPGCSWIEVDKQVHQFH-SLDKTHPRTEEIYDALESMVA 527
K+PGCSWIEVD +VH F +HP E I LE + A
Sbjct: 566 KSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGA 605
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 150/325 (46%), Gaps = 45/325 (13%)
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
A+KLFD+M +RN +SW ++SGY + G I A +FD MP+R+V +W S++ G Q GL
Sbjct: 66 AQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLI 125
Query: 229 SDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL----D 284
+A F RM N V+ L G+++ G+V R D+ D
Sbjct: 126 DEAELLFWRMP-------EKNVVSWTVMLG-----GLIEDGRVDEA---RRLFDMIPVKD 170
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
S +I G L EAR FD ++ + +W SMI+ +A++ + + + +FE M
Sbjct: 171 VVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVM-- 228
Query: 345 CQDHNIRPDG--VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGR 402
PD VT+ ++L T G + + FK M ++P G ++ G
Sbjct: 229 -------PDKNEVTWTAMLKGYTRSGRINEAAELFKAMP----VKPVAACNGMIMG-FGL 276
Query: 403 AGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF-----AEFAVKKLIEIDPNNGG 457
G +A V MK E D+ W +L+ KIY R F A F++ + + PN
Sbjct: 277 NGEVGKARWVFDQMK-EKDDGTWSALI---KIYERKGFELEALALFSLMQREGVRPNFPS 332
Query: 458 YGIMLANIYGELGKWDEVRKVRKML 482
I + ++ G L D R+V L
Sbjct: 333 I-ISILSVCGSLASLDHGRQVHSQL 356
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 84/211 (39%), Gaps = 38/211 (18%)
Query: 16 VLAILERCNHI---NHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
+++IL C + +H +Q+ S L + Y ++ +K +L + +FD
Sbjct: 333 IISILSVCGSLASLDHGRQVHSQLVR-SHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRF 391
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
++ + ++ ++I YA Q A ++ +M G P++ + VL +C
Sbjct: 392 SSKDIVMWNSIIAGYA-QHGFGEKALEVFHEMFSSG-AAPDEITFIGVLSACG------- 442
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+T VK G E + +++ D+ + M+
Sbjct: 443 ----YTGKVKEGLEIFESMKSKY--------------------QVDQKTEHYACMVDLLG 478
Query: 193 RVGDIKNAASLFDSMP-DRDVPAWNSVIAGC 222
R G + A +L ++MP + D W ++++ C
Sbjct: 479 RAGKLNEAMNLIENMPVEADAIVWGALLSAC 509
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 92/213 (43%), Gaps = 22/213 (10%)
Query: 277 YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSI 336
YR+ + I+ I + + G + AR FD K +TSWN+++ + + + +
Sbjct: 8 YRSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQ 67
Query: 337 CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCL 396
+F++M + N +++ L++ G++ + R F M E + + +
Sbjct: 68 KLFDKM---PERNT----ISWNGLVSGYVKNGMISEARKVFDKMP-----ERNVVSWTSM 115
Query: 397 VDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNG 456
V + G +EA E++ E + V W +L G GR D A ++L ++ P
Sbjct: 116 VRGYVQEGLIDEA-ELLFWRMPEKNVVSWTVMLGGLIEDGRVDEA----RRLFDMIPVKD 170
Query: 457 GYGIMLANIYGEL---GKWDEVRKVRKMLKDRN 486
+ N+ G L G+ E R++ + RN
Sbjct: 171 --VVASTNMIGGLCSEGRLSEAREIFDEMPQRN 201
>gi|357462223|ref|XP_003601393.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344321|ref|XP_003636238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490441|gb|AES71644.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502173|gb|AES83376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 486
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 280/488 (57%), Gaps = 28/488 (5%)
Query: 21 ERCNHINHLKQLQS--FLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTPNT 77
E+C + + K + + F T L Q KL RF + +L+YA +FD + P T
Sbjct: 15 EKCISMRNFKLIHAHAFRTCLHQHAVVLG--KLFRFAAVSPFGDLSYAHNMFDQMPQPTT 72
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS----CPDVLESRGT 133
+ Y +I A++ + S SL+ + +RR P++F + +LKS P V +
Sbjct: 73 FFYNTLIRAHSHSTTPSFS--SLFFNRMRRNSIAPDEFSFTFLLKSRSFTMPLVHD---- 126
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS----DRNVVSWTAMIS 189
+H + K GF ++ V+ AL++ Y+ G I ARK+F++ D ++VSW+ ++
Sbjct: 127 --IHGAVFKFGFCRHLHVQNALIHLYAVGGVTIS-ARKVFEDAVRVGLDVDIVSWSGLLV 183
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
+ + G++ A +FD MP+RDV +W +++ ++ + + F+ M + + P+
Sbjct: 184 AHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLA---GVWPD 240
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+VT++ +SA G ++G+++H +V NG + N+LIDMYGKCG L+EA + FD
Sbjct: 241 EVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFD 300
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
R +K L +WN+M+ A HG +E++ +FE M+ + PDGVT ++LL A H G
Sbjct: 301 RTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMI---GSGVVPDGVTILALLVAYAHKGF 357
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
V++G F+ M + Y +EP+IEHYG +VD+LGR+GR +EA ++ M I ++V+WG+LL
Sbjct: 358 VDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALL 417
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
C+I+G E +KKL+E+ P+ GGY I+L +IY G+ E ++R+ + A K
Sbjct: 418 GACRIHGDVGMGERVIKKLLELKPDEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARK 477
Query: 490 TPGCSWIE 497
PGCSW+E
Sbjct: 478 NPGCSWVE 485
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 268/496 (54%), Gaps = 44/496 (8%)
Query: 66 RFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
R IFD++ + ++ Y +I+ +A A ++ M + G +P ++ + VL +C
Sbjct: 109 RVIFDNMPSRDSVSYNTVISGFAGN-GRGGPALGVFLRMQKEGL-KPTEYTHVSVLNACT 166
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
+L+ R K +H +I+ V AL + Y+R G +I AR+LFD M RNVV+W
Sbjct: 167 QLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCG-EIDQARRLFDRMVIRNVVTWN 225
Query: 186 AMISGYTR-----------------------------------VGDIKNAASLFDSMPDR 210
MISGY + G I A +F + ++
Sbjct: 226 LMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREK 285
Query: 211 DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK 270
D W +I GC QNG DA+ F M +E N RP+ T+ +S+ L G+
Sbjct: 286 DEVCWTIMIVGCAQNGKEEDALLLFSEMLLE---NARPDGYTISSVVSSCAKLASLYHGQ 342
Query: 271 VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG 330
V+HG + G++ D +S+AL+DMY KCG ++A F + + SWNSMI +AL+G
Sbjct: 343 VVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNG 402
Query: 331 QSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQI 390
Q ++ ++E M+ + N++PD VTF+ +L+AC H GLVE+G+ YF M+ + +EP
Sbjct: 403 QDLEALSLYENML---EENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTP 459
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE 450
+HY C+V+L GR+G ++A++++ M EP+ ++W ++L+ C + G E A + LIE
Sbjct: 460 DHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIE 519
Query: 451 IDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDK 510
++P N IML+N+Y G+W +V +R ++K ++ K SWIE+D +VH+F + D+
Sbjct: 520 LNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDR 579
Query: 511 THPRTEEIYDALESMV 526
THP + I+ L ++
Sbjct: 580 THPDAKIIHVQLNRLI 595
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 155/285 (54%), Gaps = 15/285 (5%)
Query: 151 VETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR 210
+ L+N Y++SG +I ARKLFDEM+ R+ SW AM+S Y + G +++ +FD+MP R
Sbjct: 60 IHNRLLNLYAKSG-EISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSR 118
Query: 211 DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK 270
D ++N+VI+G NG A+ F RM E ++P + T V L+A L+ GK
Sbjct: 119 DSVSYNTVISGFAGNGRGGPALGVFLRMQKE---GLKPTEYTHVSVLNACTQLLDLRRGK 175
Query: 271 VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG 330
IHG + L + F+ NAL D+Y +CG + +ARR FDR + + +WN MI+ + +
Sbjct: 176 QIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNR 235
Query: 331 QSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQI 390
Q E I +F EM Q N++PD VT S+L A G +++ R F + + + I
Sbjct: 236 QPEKCIDLFHEM---QVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTI 292
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGMKIE---PDEVVWGSLLNGC 432
GC + G+ E+AL + M +E PD S+++ C
Sbjct: 293 MIVGC-----AQNGKEEDALLLFSEMLLENARPDGYTISSVVSSC 332
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 284 DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM- 342
D+FI N L+++Y K G + AR+ FD +++ SWN+M++ +A G E+ +F+ M
Sbjct: 57 DTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMP 116
Query: 343 ---------------------------MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
+R Q ++P T +S+LNACT + +G+
Sbjct: 117 SRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQ 176
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
+ + + L DL R G ++A + M I + V W +++G Y
Sbjct: 177 IHGRII-ICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIR-NVVTWNLMISG---Y 231
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLAN----IYGELGKWDEVRKVRKMLKDRN 486
+ E + E+ +N + A+ Y + G DE RKV +++++
Sbjct: 232 LKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKD 286
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 175/500 (35%), Positives = 263/500 (52%), Gaps = 45/500 (9%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
++ + ++ A +F+ + N + MI YA Q SA L+ M R N +
Sbjct: 126 IRSNKISDAEKLFNEMPNKNVVSWNTMIDGYA-QNGRIDSAMYLFEKMPERNVVSWNTVM 184
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+L C + E+R ++ E+ + TA++ S++G I AR LFD M
Sbjct: 185 --SMLAQCGRIEEAR-------RLFDRMPERDVISWTAMIAGLSKNGR-IDEARLLFDRM 234
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+RNVVSW AMI+GY + + A LF+ MP+RD+P+WN++I G QNG A F
Sbjct: 235 PERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFN 294
Query: 237 RMG-----------------------------MEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
M M ++ +PNQ T V L A + L
Sbjct: 295 EMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLG 354
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD--RNSKKRLTSWNSMINS 325
G+ +H + + +F+ +ALI+MY KCG L AR+ FD S++ L SWN +I +
Sbjct: 355 EGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAA 414
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
+A HG + +I F+EM + +PD VT++ LL+AC+H GLVE+G YF + K
Sbjct: 415 YAHHGYGKEAINFFKEMRK---SGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRS 471
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
I + +HY CLVDL GRAGR +EA ++ ++ +P VWG+LL GC ++ + A
Sbjct: 472 ILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAA 531
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
KKL+E++P N G ++L+NIY GKW E +VR +KD+ K PGCSWIEV +VH F
Sbjct: 532 KKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVF 591
Query: 506 HSLDKTHPRTEEIYDALESM 525
DK+H +++ IY L +
Sbjct: 592 VVGDKSHSQSKLIYSLLRDL 611
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 138/288 (47%), Gaps = 29/288 (10%)
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEM-SDRNVVSWTAMISGYTRVGDIKNAASLFDSMP 208
+ T +++ Y + G I AR+LFD + + +NVV+WTAM+ GY R I +A LF+ MP
Sbjct: 84 ITWTTVISGYIKCGM-IEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMP 142
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
+++V +WN++I G QNG A+ F +M N V+ +S + G ++
Sbjct: 143 NKNVVSWNTMIDGYAQNGRIDSAMYLFEKMP-------ERNVVSWNTVMSMLAQCGRIEE 195
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
+ ++ + D A+I K G + EAR FDR ++ + SWN+MI +A
Sbjct: 196 AR----RLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQ 251
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
+ + + ++ +FE M D ++ +++ G + + R F M K I
Sbjct: 252 NLRLDEALDLFERMP-------ERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISW 304
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGM----KIEPDEVVWGSLLNGC 432
GC+ + G EEAL++ M +P++ + S+L C
Sbjct: 305 TTMITGCV-----QEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGAC 347
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 171/512 (33%), Positives = 278/512 (54%), Gaps = 43/512 (8%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL--SNLTYARFIFDHLTT 74
+ ++ +CN L Q+Q++ Q +F KL+ FCT S+++YAR +FD ++
Sbjct: 35 ILLISKCNSERELMQIQAYAIKSHQEDVSFNT-KLINFCTESPTESSMSYARHLFDAMSE 93
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
P+ ++ ++ Y S+ + F+L+ +++ P+ + +P +LK+C +
Sbjct: 94 PDIVIFNSIARGY-SRSTNPLEVFNLFVEILE-DDLLPDNYTFPSLLKACAVAKALEEGR 151
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H +K G D NV +I+ YT
Sbjct: 152 QLHCLSMKLGV--------------------------------DDNVYVCPTLINMYTEC 179
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
D+ A +FD + + V +N++I G + ++A+S FR M N++PN++TL+
Sbjct: 180 EDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ---GKNLKPNEITLL 236
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
LS+ G L LGK IH Y ++G ++ ALIDM+ KCGSL +A F+ K
Sbjct: 237 SVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYK 296
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+W++MI ++A HGQ+ENS+ +FE M + N++PD +TF+ LLNAC+H GLVE+GR
Sbjct: 297 DTQAWSAMIVAYANHGQAENSMLMFERM---RSENVQPDEITFLGLLNACSHTGLVEEGR 353
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
YF M + I P I+HYG +VDLLGRAG E+A E + + I P ++W LL C
Sbjct: 354 EYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAACSS 413
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+ + AE ++++E+D ++GG ++L+N+Y KW+ V +RK++KDR A K PGCS
Sbjct: 414 HNNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKVMKDRKAVKVPGCS 473
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
IEV+ VH+F S D T +++ AL+ MV
Sbjct: 474 SIEVNNVVHEFFSGDGVKSATTKLHRALDEMV 505
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 169/482 (35%), Positives = 264/482 (54%), Gaps = 10/482 (2%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L R N +N +Q+ + +T LG F + L+ NL YAR +FD +
Sbjct: 93 ILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYA-ACGNLCYARSVFDEMVVK 151
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ + ++I Y SQ +L++ M G + ++ V+ +C + +
Sbjct: 152 DVVSWNSLICGY-SQCNRFKDILALFKLMQNEG-VKADKVTMIKVVSACTRLGDYSMADY 209
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+ I E + LV+ + R G + A K+F M RN+V+ AMI+ Y +
Sbjct: 210 MVRYIEDYCIEVDVYLGNTLVDYFGRRGQ-LQSAEKVFFNMKVRNIVTMNAMIAAYAKGQ 268
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
DI +A +FD +P +D+ +W+S+I+G +Q FSDA+ FR+M ++P+ + +
Sbjct: 269 DIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRA---KVKPDAIVIAS 325
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
+S+ H G L LGK +H YV RN + D+ + N+LIDMY KCGS KEA + F +K
Sbjct: 326 VVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKD 385
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
SWNS+I A +G + S+ +F+ M+ RP+GVTF+ +L AC + LVE+G
Sbjct: 386 TLSWNSIIIGLANNGFEKESLNLFQAMLT---EGFRPNGVTFLGVLIACANAKLVEEGLD 442
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
+F+ M + Y +EPQ++HYGC+VDLLGRAG+ E+AL + M I+PD VVW LL C +
Sbjct: 443 HFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTH 502
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
G AE KKL E++P+N G +L+N Y +W E VR+ + D + K+PGCS
Sbjct: 503 GDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSA 562
Query: 496 IE 497
+E
Sbjct: 563 VE 564
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 202/411 (49%), Gaps = 27/411 (6%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYA 88
+K+L ++ G ++ K++R + +L +A +FD + P T+L+ +I A
Sbjct: 4 IKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLA 63
Query: 89 SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQY 148
A A A + Y+ + G P+ +P +LK+C + + +H I K G
Sbjct: 64 QSDAPA-DAIAFYKK-AQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLSD 121
Query: 149 PVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP 208
V +L++ Y+ GN + AR +FDEM ++VVSW ++I GY++ K+ +LF M
Sbjct: 122 IFVSNSLIHLYAACGN-LCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQ 180
Query: 209 DRDVPAWN----SVIAGCTQNGLFSDA---ISFFRRMGMEVSDNIRPNQVTLVCALSAIG 261
+ V A V++ CT+ G +S A + + +EV D N TLV G
Sbjct: 181 NEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEV-DVYLGN--TLV---DYFG 234
Query: 262 HTGMLQLG-KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
G LQ KV RN + + NA+I Y K + AR+ FD+ KK L SW+
Sbjct: 235 RRGQLQSAEKVFFNMKVRNIVTM-----NAMIAAYAKGQDIVSARKIFDQIPKKDLISWS 289
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
SMI+ ++ +++ +F +M R + ++PD + S++++C H G ++ G+ + +
Sbjct: 290 SMISGYSQANHFSDALEIFRQMQRAK---VKPDAIVIASVVSSCAHLGALDLGKWVHEYV 346
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ I+ L+D+ + G +EAL+V K MK E D + W S++ G
Sbjct: 347 RRN-NIKADTIMENSLIDMYMKCGSAKEALQVFKEMK-EKDTLSWNSIIIG 395
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 167/517 (32%), Positives = 274/517 (52%), Gaps = 15/517 (2%)
Query: 11 TLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFD 70
+++ ++A+ +C + + + L + + +V + ++ ++ AR +F+
Sbjct: 195 SVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGY--VRRGDVGAARSVFE 252
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ ++ AMI+ Y AF L+R MV P ++F + VL +C +
Sbjct: 253 EVDVKFDVVWNAMISGYV-HSGMVVEAFELFRRMVLERVPL-DEFTFTSVLSACANAGFF 310
Query: 131 RGTKMVHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
K VH QI + P V ALV YS+ GN I +AR++FD M ++VVSW
Sbjct: 311 AHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGN-IAVARRIFDNMKSKDVVSWNT 369
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
++SGY + A +F+ MP ++ +W +++G G DA+ F RM E ++
Sbjct: 370 ILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAE---DV 426
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
+P T A+SA G G L+ GK +HG++ + G + + NALI MY +CG++KEA
Sbjct: 427 KPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANL 486
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F SWN+MI++ HG ++ +F+ M+ I PD ++F+++L AC H
Sbjct: 487 MFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVA---EGIYPDRISFLTVLTACNH 543
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GLV++G YF+ M + + I P +HY L+DLLGRAGR EA +++K M EP +W
Sbjct: 544 SGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWE 603
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
++L+GC+ G + A +L ++ P + G I+L+N Y G+W + +VRK+++DR
Sbjct: 604 AILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRG 663
Query: 487 AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K PGCSWIE +VH F D HP ++Y LE
Sbjct: 664 VKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLE 700
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 148/342 (43%), Gaps = 47/342 (13%)
Query: 131 RGTKMVHTQIVKSGF---EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
R + +H +++ S +P + L++ Y+ SG D+ A LF +D V+ T++
Sbjct: 38 RALRCLHARLLTSALLHAPPHPHLTLRLIHLYTLSG-DLPAAATLFR--ADPCPVAATSL 94
Query: 188 ISGYTRVGDIKNAASLFDSMPD--RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
++ Y G + A S FD++P RD N+VI+ + + A++ FR + S +
Sbjct: 95 VAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFR--SLLASGS 152
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKV--IHGYVYRNGLDLDSFISNALIDMYGKCGSL-- 301
+RP+ + LSA GH + + + V ++G +SNAL+ +Y KC +L
Sbjct: 153 LRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEA 212
Query: 302 -KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM------------------ 342
++AR+ D K +W +M+ + G + VFEE+
Sbjct: 213 TRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHS 272
Query: 343 ----------MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK---TYRIEPQ 389
R + D TF S+L+AC + G G++ +T+ + E
Sbjct: 273 GMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAA 332
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ LV L + G A + MK + D V W ++L+G
Sbjct: 333 LPVNNALVTLYSKCGNIAVARRIFDNMKSK-DVVSWNTILSG 373
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 274/517 (52%), Gaps = 83/517 (16%)
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
TP++ + T + P A +AFS P+ + F Y ++K+ L + G
Sbjct: 97 TPSSPTPCSAPTRWGGAPRDALAAFS--------AMPRRDSFTYSFLIKA----LSAAGV 144
Query: 134 ---KMVHTQIVKSGFEQYPVVETALVNSYSRSGN-------------------------- 164
+ VH+ +VK G + V AL+++YS++G
Sbjct: 145 APVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAM 204
Query: 165 ----DIGIARKLFDEMSD-------------------------------RNVVSWTAMIS 189
++ RKLFDEM + RNVVSW+ M+S
Sbjct: 205 VREGELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVS 264
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GY + GD++ A +FD MP +++ W +++ C Q GL +A F +M E S + +
Sbjct: 265 GYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQM-KEAS--VELD 321
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+V L+A +G L LGK IH YV + L + + NALIDM+ KCG + A FD
Sbjct: 322 VAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFD 381
Query: 310 RNS-KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
+ +K SWNS+I FA+HG + ++ +F +M + PD VT I++L+ACTH G
Sbjct: 382 TETVQKDSVSWNSIIGGFAMHGHGDKALELFAQM---KQQGFNPDAVTMINVLSACTHMG 438
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
V++GR +F M + Y I PQIEHYGC++DLLGR G +EA++++K M EP+EV+WGSL
Sbjct: 439 FVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSL 498
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L+ C+++ ++AE AV +L ++ P+N G +L+NIY E G+W ++ K R +K +
Sbjct: 499 LSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQ 558
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
KT G SW+E+++ H+F D+ H +++I + ++ +
Sbjct: 559 KTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRL 595
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 290/513 (56%), Gaps = 12/513 (2%)
Query: 16 VLAILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
++ ++ C + L+ ++ +F+ G + LV +K + + A+ +FD
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM-YMKCNAIDVAKRLFDEY 297
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
N L AM + Y Q A ++ M+ G +P++ + SC +
Sbjct: 298 GASNLDLCNAMASNYVRQ-GLTREALGVFNLMMDSG-VRPDRISMLSAISSCSQLRNILW 355
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
K H ++++GFE + + AL++ Y + A ++FD MS++ VV+W ++++GY
Sbjct: 356 GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ-DTAFRIFDRMSNKTVVTWNSIVAGYV 414
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
G++ A F++MP++++ +WN++I+G Q LF +AI F M+ + + + VT
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF--CSMQSQEGVNADGVT 472
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
++ SA GH G L L K I+ Y+ +NG+ LD + L+DM+ +CG + A F+ +
Sbjct: 473 MMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT 532
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+ +++W + I + A+ G +E +I +F++M+ + ++PDGV F+ L AC+HGGLV+Q
Sbjct: 533 NRDVSAWTAAIGAMAMAGNAERAIELFDDMI---EQGLKPDGVAFVGALTACSHGGLVQQ 589
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G+ F M K + + P+ HYGC+VDLLGRAG EEA+++++ M +EP++V+W SLL C
Sbjct: 590 GKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAAC 649
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
++ G + A +A +K+ + P G ++L+N+Y G+W+++ KVR +K++ K PG
Sbjct: 650 RVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPG 709
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
S I++ + H+F S D++HP I L+ +
Sbjct: 710 TSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEV 742
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 201/442 (45%), Gaps = 53/442 (11%)
Query: 8 LNQT-LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLV-RFCTLKL-SNLTY 64
LNQ+ + + L+ C I+ LK LT G KLV R C L +L++
Sbjct: 26 LNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSF 85
Query: 65 ARFIFDHLTTPNT-YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
A+ +F++ + T ++Y ++I YAS + A L+ M+ G P+++ +P L +
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASS-GLCNEAILLFLRMMNSG-ISPDKYTFPFGLSA 143
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
C +H IVK G+ + V+ +LV+ Y+
Sbjct: 144 CAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAE---------------------- 181
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
G++ +A +FD M +R+V +W S+I G + DA+ F RM +
Sbjct: 182 ----------CGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD-- 229
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
+ + PN VT+VC +SA L+ G+ ++ ++ +G++++ + +AL+DMY KC ++
Sbjct: 230 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A+R FD L N+M +++ G + ++ VF MM D +RPD ++ +S +++
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM---DSGVRPDRISMLSAISS 346
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHY----GCLVDLLGRAGRFEEALEVVKGMKIE 419
C+ + G++ Y + E + L+D+ + R + A + M
Sbjct: 347 CSQLRNILWGKS-----CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS-N 400
Query: 420 PDEVVWGSLLNGCKIYGRTDFA 441
V W S++ G G D A
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAA 422
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 156/469 (33%), Positives = 271/469 (57%), Gaps = 8/469 (1%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K + A+ +F+ L N+ +T +I + Q S + L+ M R +QF
Sbjct: 317 KCGSFKEAKRVFNSLQDRNSVSWTVLIGG-SLQYECFSKSVELFNQM-RAELMAIDQFAL 374
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
++ C + ++ + +H+ +KSG + VV +L++ Y++ G D+ A +F MS
Sbjct: 375 ATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCG-DLQNAEFVFSSMS 433
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+R++VSWT+MI+ Y+++G+I A FD M R+ WN+++ Q+G D + +
Sbjct: 434 ERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYS- 492
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M ++ P+ VT V G +LG I G+ + GL L+ ++NA I MY K
Sbjct: 493 -AMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSK 551
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG + EA++ FD + K + SWN+MI ++ HG + + F++M+ +PD +++
Sbjct: 552 CGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDML---SKGAKPDYISY 608
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+++L+ C+H GLV++G+ YF +MT+ + I P +EH+ C+VDLLGRAG EA +++ M
Sbjct: 609 VAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMP 668
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
++P VWG+LL+ CKI+G + AE A K + E+D + G ++LA IY + GK D+ +
Sbjct: 669 MKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQ 728
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
VRK+++D+ K PG SW+EV+ +VH F + D +HP+ I + L+ ++
Sbjct: 729 VRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELM 777
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 174/378 (46%), Gaps = 18/378 (4%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K +L+ A +FD + + + +++ Y Q + M R G PN F +
Sbjct: 83 KQGSLSDAEELFDRMPRRDVASWNTLMSGYF-QARRFLDGLETFVSMHRSGDSLPNAFTF 141
Query: 118 PHVLKSCPDVLESRGTKMVHTQIV----KSGFEQYPVVETALVNSYSRSGNDIGIARKLF 173
V+KSC + G + + Q++ K F P VETALV+ + R G + A +LF
Sbjct: 142 CCVMKSCGAL----GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGY-VDFASRLF 196
Query: 174 DEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
++ + +M++GY ++ I +A F+ M +RDV +WN +IA +Q+G +A+
Sbjct: 197 SQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALG 256
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
M + +R + T +L+A L GK +H V R+ +D ++++ALI+
Sbjct: 257 LVVEMHRK---GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIE 313
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
+Y KCGS KEA+R F+ + SW +I + S+ +F + MR + I D
Sbjct: 314 LYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQ-MRAELMAI--D 370
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
+L++ C + + GR L K+ I L+ L + G + A V
Sbjct: 371 QFALATLISGCFNRMDLCLGRQLHSLCLKSGH-NRAIVVSNSLISLYAKCGDLQNAEFVF 429
Query: 414 KGMKIEPDEVVWGSLLNG 431
M E D V W S++
Sbjct: 430 SSMS-ERDIVSWTSMITA 446
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 156/349 (44%), Gaps = 42/349 (12%)
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
L+SC G + +H ++V G ++ L+++Y G R L ++ +
Sbjct: 10 ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEP 69
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
NV++ M++GY + G + +A LFD MP RDV +WN++++G Q F D + F +
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF--VS 127
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
M S + PN T C + + G G +L + G ++ D + AL+DM+ +CG
Sbjct: 128 MHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCG 187
Query: 300 SLKEARRAFD---------RNS----------------------KKRLTSWNSMINSFAL 328
+ A R F RNS ++ + SWN MI + +
Sbjct: 188 YVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQ 247
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
G+ ++ + EM R +R D T+ S L AC + G+ +L K R P
Sbjct: 248 SGRVREALGLVVEMHR---KGVRLDSTTYTSSLTACARLFSLGWGK---QLHAKVIRSLP 301
Query: 389 QIEHY--GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
QI+ Y L++L + G F+EA V ++ + + V W L+ G Y
Sbjct: 302 QIDPYVASALIELYAKCGSFKEAKRVFNSLQ-DRNSVSWTVLIGGSLQY 349
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 39/219 (17%)
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR----- 306
L AL + G G L + +HG + GL F+ N L+ Y CG+L +ARR
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65
Query: 307 ---------------------------AFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
FDR ++ + SWN++++ + + + + F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK-TYRIEPQIEHYGCLVD 398
M R D P+ TF ++ +C G E L K + +P +E LVD
Sbjct: 126 VSMHRSGDS--LPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TALVD 181
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG-CKIYG 436
+ R G + A + ++ P S+L G K+YG
Sbjct: 182 MFVRCGYVDFASRLFSQIE-RPTIFCRNSMLAGYAKLYG 219
>gi|218194384|gb|EEC76811.1| hypothetical protein OsI_14939 [Oryza sativa Indica Group]
Length = 540
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 158/441 (35%), Positives = 258/441 (58%), Gaps = 37/441 (8%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + + M+ Y Q + A L+ M +R + P+Q I VL +C
Sbjct: 123 ARKVFDGMPDRDLVAWGVMLDCYC-QARNYEEALLLFHSM-KRSRVVPDQVIIATVLSTC 180
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
R K +H+ ++ S V AL+N Y+ S D+ +A KL++ +S++++V
Sbjct: 181 AHTRNLRFGKAIHSYMLVSDALIDAQVSCALMNMYA-SCADMEMAEKLYNRVSEKDIVLS 239
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T M+ GY + G ++ A S+F+ MP++DV +W+++IAG ++ +A++ F M
Sbjct: 240 TTMVYGYAKNGKVEIAHSIFNGMPEKDVVSWSAMIAGYAESSKPMEALNLFHDMQ---RS 296
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
++P+++T++ L I NALIDM+ KCGSL A
Sbjct: 297 GVQPDEITMLSILP----------------------------IGNALIDMFSKCGSLTLA 328
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F+ +K + +W S+I + A+HG +++ +FE M + I+P+GVTF+ LL AC
Sbjct: 329 LDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENM---KSEGIQPNGVTFLGLLYAC 385
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
H GLVE+GR FK+M + YRIEP EHYGC+VDLLGRA +A ++++ M + P+ V+
Sbjct: 386 CHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPNVVI 445
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WGSLL C+++G + FA KK++E+DPN+GG ++L+NIY E G W++V++VR ++K
Sbjct: 446 WGSLLAACRMHGDLELGAFAAKKILELDPNHGGAQVLLSNIYAEYGNWNDVKEVRGVMKV 505
Query: 485 RNAYKTPGCSWIEVDKQVHQF 505
+ +K GCSW+E++ VHQF
Sbjct: 506 QGTWKKKGCSWMELNGSVHQF 526
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 165/397 (41%), Gaps = 56/397 (14%)
Query: 69 FDHLTTPNTYLYTAMITAY--ASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPD 126
F P+ L A I+A A+ P A +AF+ R R G P P + P +L++
Sbjct: 25 FPPAAHPDPDLDRAYISAIRAATAPRLALAAFACLR---RVGLPAPGRRALPSLLRA--- 78
Query: 127 VLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
AL +G G+A ++ E+ TA
Sbjct: 79 --------------------------IALARFPGTAGAAHGLAFRVGAEVDG---FVGTA 109
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
++ Y G +++A +FD MPDRD+ AW ++ Q + +A+ F M +
Sbjct: 110 LVRAYAACGRVEDARKVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHSMK---RSRV 166
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
P+QV + LS HT L+ GK IH Y+ + +D+ +S AL++MY C ++ A +
Sbjct: 167 VPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDALIDAQVSCALMNMYASCADMEMAEK 226
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
++R S+K + +M+ +A +G+ E + +F M D V++ +++
Sbjct: 227 LYNRVSEKDIVLSTTMVYGYAKNGKVEIAHSIFNGM-------PEKDVVSWSAMIAGYAE 279
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYG------CLVDLLGRAGRFEEALEVVKGMKIEP 420
+ F M ++ +I L+D+ + G AL+V M +
Sbjct: 280 SSKPMEALNLFHDMQRSGVQPDEITMLSILPIGNALIDMFSKCGSLTLALDVFNAMP-QK 338
Query: 421 DEVVWGSLLNGCKIY--GRTDFAEFAVKKLIEIDPNN 455
+ V W S++ ++ GR+ F K I PN
Sbjct: 339 NVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNG 375
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 266/507 (52%), Gaps = 61/507 (12%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
++ ++ A +F+ + +T + +++ A+A +P H A L+ + PQPN
Sbjct: 52 VRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI-----PQPNTVS 106
Query: 117 YPHVLKSCP----DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGI---A 169
Y +++ +C V ++RG F+ P+ + A N+ + +G+ A
Sbjct: 107 Y-NIMLACHWHHLGVHDARGF-----------FDSMPLKDVASWNTMISALAQVGLMGEA 154
Query: 170 RKLFDEMSDRNVVSWTAMISGYTRVGDIKNAAS--------------------------- 202
R+LF M ++N VSW+AM+SGY GD+ A
Sbjct: 155 RRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVE 214
Query: 203 ----LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
LF M R + WN++IAG +NG D + FR M + ++PN ++L L
Sbjct: 215 LAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTM---LETGVKPNALSLTSVLL 271
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
+ LQLGK +H V + L D+ +L+ MY KCG LK+A F + +K +
Sbjct: 272 GCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVC 331
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
WN+MI+ +A HG + ++ +F+EM + ++PD +TF+++L AC H GLV+ G YF
Sbjct: 332 WNAMISGYAQHGAGKKALRLFDEM---KKEGLKPDWITFVAVLLACNHAGLVDLGVQYFN 388
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
M + + IE + EHY C+VDLLGRAG+ EA++++K M +P ++G+LL C+I+
Sbjct: 389 TMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNL 448
Query: 439 DFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV 498
+ AEFA K L+E+DP + LAN+Y +WD V +R+ +KD N K PG SWIE+
Sbjct: 449 NLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEI 508
Query: 499 DKQVHQFHSLDKTHPRTEEIYDALESM 525
+ VH F S D+ HP I++ L+ +
Sbjct: 509 NSVVHGFRSSDRLHPELASIHEKLKDL 535
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 136/314 (43%), Gaps = 57/314 (18%)
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQN-GLFSDAIS 233
E ++ NV++ +I+ Y R GDI +A +F+ M + WNS++A + G F A
Sbjct: 35 EFNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQ 94
Query: 234 FFRRMGME--VSDNIR-------------------------PNQVTLVCALSAIGHTG-- 264
F ++ VS NI + T++ AL+ +G G
Sbjct: 95 LFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEA 154
Query: 265 -----------MLQLGKVIHGYVYRNGLD----------LDSFIS-NALIDMYGKCGSLK 302
+ ++ GYV LD + S I+ A+I Y K G ++
Sbjct: 155 RRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVE 214
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
A R F S + L +WN+MI + +G++E+ + +F M+ + ++P+ ++ S+L
Sbjct: 215 LAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTML---ETGVKPNALSLTSVLL 271
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
C++ ++ G+ +L+ K + LV + + G ++A E+ + D
Sbjct: 272 GCSNLSALQLGKQVHQLVCKC-PLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIP-RKDV 329
Query: 423 VVWGSLLNGCKIYG 436
V W ++++G +G
Sbjct: 330 VCWNAMISGYAQHG 343
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 174/505 (34%), Positives = 262/505 (51%), Gaps = 53/505 (10%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD L + + +MI+ Y S +Y+ M+ G I VL C +
Sbjct: 207 LFDKLCDRDVISWNSMISGYVSN-GLTERGLGIYKQMMYLGIDVDLATIIS-VLVGCANS 264
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
K VH+ +KS FE+ L++ YS+ G D+ A ++F++M +RNVVSWT+M
Sbjct: 265 GTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG-DLDGALRVFEKMGERNVVSWTSM 323
Query: 188 ISGYTRVGDIKNAASLFDSMPDR----DVPAWNSVIAGCTQNGLFSDA------------ 231
I+GYTR G A L M DV A S++ C ++G +
Sbjct: 324 IAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 383
Query: 232 ----------ISFFRRMG-MEVSDNI-------------------RPNQVTLVCALSAIG 261
+ + + G ME ++++ +P+ T+ C L A
Sbjct: 384 ESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACA 443
Query: 262 HTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNS 321
L+ GK IHGY+ RNG D ++NAL+D+Y KCG L AR FD K L SW
Sbjct: 444 SLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTV 503
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
MI + +HG +I F EM +D I PD V+FIS+L AC+H GL+EQG +F +M
Sbjct: 504 MIAGYGMHGYGNEAIATFNEM---RDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMK 560
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+ IEP++EHY C+VDLL R G +A E ++ + I PD +WG+LL GC+ Y + A
Sbjct: 561 NDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELA 620
Query: 442 EFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQ 501
E +++ E++P N GY ++LANIY E KW+EV+++R+ + + K PGCSWIE+ +
Sbjct: 621 EKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGK 680
Query: 502 VHQFHSL-DKTHPRTEEIYDALESM 525
V+ F S + +HP ++ I L+ M
Sbjct: 681 VNLFVSGNNSSHPHSKNIESLLKKM 705
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 164/345 (47%), Gaps = 35/345 (10%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
Y VL+ C + K VH+ I + + LV+ Y+ G D+ R++FD M
Sbjct: 102 YSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCG-DLKEGRRVFDTM 160
Query: 177 SDRNVVSWTAMISGYTRVGDIK--------------------NAASLFDSMPDRDVPAWN 216
+NV W M+S Y ++GD K +A LFD + DRDV +WN
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWN 220
Query: 217 SVIAGCTQNGLFSDAISFFRRM---GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH 273
S+I+G NGL + +++M G++V + T++ L ++G L LGK +H
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDV------DLATIISVLVGCANSGTLSLGKAVH 274
Query: 274 GYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSE 333
++ + SN L+DMY KCG L A R F++ ++ + SW SMI + G+S+
Sbjct: 275 SLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSD 334
Query: 334 NSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
+I + ++M + ++ D V S+L+AC G ++ G+ + K +E +
Sbjct: 335 GAIKLLQQM---EKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI-KANNMESNLFVC 390
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
L+D+ + G E A V M ++ D + W +++ K RT
Sbjct: 391 NALMDMYAKCGSMEAANSVFSTMVVK-DIISWNTMIGELKPDSRT 434
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 114/314 (36%), Gaps = 90/314 (28%)
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLF--DSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
D V + A I + ++GD++NA L + + ++SV+ C F+D
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELICMCKKSELETKTYSSVLQLCAGLKSFTD----- 117
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
GK +H + N + +D + L+ Y
Sbjct: 118 ---------------------------------GKKVHSIIKSNSVGVDEALGLKLVSFY 144
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP--- 352
CG LKE RR FD KK + WN M++ +A G + SIC+F+ M+ RP
Sbjct: 145 ATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESA 204
Query: 353 ---------------------------------------------DGVTFISLLNACTHG 367
D T IS+L C +
Sbjct: 205 FELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANS 264
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
G + G+A L K+ E +I L+D+ + G + AL V + M E + V W S
Sbjct: 265 GTLSLGKAVHSLAIKS-SFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTS 322
Query: 428 LLNGCKIYGRTDFA 441
++ G GR+D A
Sbjct: 323 MIAGYTRDGRSDGA 336
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 165/461 (35%), Positives = 252/461 (54%), Gaps = 41/461 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K NL A +F+ + + +T+MI YA + + + L+ +M + G P+ F
Sbjct: 298 KSGNLNSAIQVFETMGERSVVSWTSMIAGYARE-GLSDMSVRLFHEMEKEG-ISPDIFTI 355
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+L +C K VH I ++ + V AL++ Y++ G+
Sbjct: 356 TTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGS------------- 402
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+GD A S+F M +D+ +WN++I G ++N L ++A++ F
Sbjct: 403 ----------------MGD---AHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLF-- 441
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
+E+ N +PN +T+ C L A L+ G+ IHG++ RNG LD ++NAL+DMY K
Sbjct: 442 --VEMQYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLK 499
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG+L AR FD +K L SW MI + +HG +I F EM ++ I PD V+F
Sbjct: 500 CGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEM---RNSGIEPDEVSF 556
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
IS+L AC+H GL+++G +F +M IEP+ EHY C+VDLL RAG +A + +K M
Sbjct: 557 ISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMP 616
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
IEPD +WG+LL GC+IY AE + + E++P N GY ++LANIY E KW+EV+K
Sbjct: 617 IEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKK 676
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
+R+ + R K PGCSWIE+ +VH F + D +HP +I
Sbjct: 677 LRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKI 717
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 189/377 (50%), Gaps = 32/377 (8%)
Query: 109 QPQPNQFI--YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDI 166
P+P+ + Y VL+ C D+ + + +H+ I + E V+ + LV Y G D+
Sbjct: 94 SPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCG-DL 152
Query: 167 GIARKLFDEMSDRNVVSWTAMISGYTRVGD------------------IKNAASLFDSMP 208
R++FD++++ V W +++GY ++G+ +++A LFD +
Sbjct: 153 REGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELG 212
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
DRDV +WNS+I+G NGL + F +M + I + T+V ++ +TGML L
Sbjct: 213 DRDVISWNSMISGYVSNGLSEKGLDLFEQMLLL---GINTDLATMVSVVAGCSNTGMLLL 269
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
G+ +HGY + + ++N L+DMY K G+L A + F+ ++ + SW SMI +A
Sbjct: 270 GRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAR 329
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
G S+ S+ +F EM + I PD T ++L+AC GL+E G+ + K +++
Sbjct: 330 EGLSDMSVRLFHEM---EKEGISPDIFTITTILHACACTGLLENGKDVHNYI-KENKMQS 385
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL 448
+ L+D+ + G +A V M+++ D V W +++ G Y + A+
Sbjct: 386 DLFVSNALMDMYAKCGSMGDAHSVFSEMQVK-DIVSWNTMIGG---YSKNSLPNEALNLF 441
Query: 449 IEIDPNNGGYGIMLANI 465
+E+ N+ I +A I
Sbjct: 442 VEMQYNSKPNSITMACI 458
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 263/467 (56%), Gaps = 11/467 (2%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + + MI Y A LY+ + G + + + +L +C
Sbjct: 261 AREVFDKMKKRDMVSWNVMIGCYVLN-GDFHEALELYQKLDMEGFKR-TKATFVSILGAC 318
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
V ++VH+ I++ G + V TALVN Y++ G+ + ARK+F+ M +R+ V+W
Sbjct: 319 SSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGS-LEEARKVFNAMKNRDAVAW 377
Query: 185 TAMISGYTRVG---DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
+ +I Y G D + A +FD + RD +WN++I QNG A+ FR M
Sbjct: 378 STLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREM--T 435
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+ ++P+ VT + L A G L K +H + + L+ + ++N LI+MY +CGSL
Sbjct: 436 GAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSL 495
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+EA R F +K + SW +M+ +F+ +G+ ++ +F+EM ++PD VT+ S+L
Sbjct: 496 EEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEM---DLEGVKPDDVTYTSIL 552
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
CTHGG +EQG YF M + + + P +H+ +VDLLGR+GR +A E+++ M EPD
Sbjct: 553 FVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPD 612
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
V W + L C+I+G+ + E A +++ E+DP++ I ++NIY G W++V VRK
Sbjct: 613 PVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKK 672
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
+++R K PG S+IEVD ++H+F S K HPRT+EI + L + L
Sbjct: 673 MEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGL 719
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 177/376 (47%), Gaps = 48/376 (12%)
Query: 58 KLSNLTYARFIFDHLT--TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQF 115
K +L AR +F+ + N + AMI AYA Q H++ A LY M +G +
Sbjct: 54 KCDSLVDARSVFESMDWRQRNVVSWNAMIAAYA-QNGHSTEALVLYWRMNLQGLG-TDHV 111
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
+ VL +C + + R +H ++ SG + + + ALV Y+R G+
Sbjct: 112 TFVSVLGACSSLAQGR---EIHNRVFYSGLDSFQSLANALVTMYARFGS----------- 157
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
VGD K +F S+ RD +WN+VI +Q+G +S A+ F
Sbjct: 158 ------------------VGDAKR---MFQSLQTRDETSWNAVILAHSQSGDWSGALRIF 196
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
+ M +V +PN T + +S +L G+ IH + NG D D ++ ALI+MY
Sbjct: 197 KEMKCDV----KPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMY 252
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
GKCGS EAR FD+ K+ + SWN MI + L+G ++ +++++ +
Sbjct: 253 GKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKL---DMEGFKRTKA 309
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF+S+L AC+ + QGR + + ++ ++ LV++ + G EEA +V
Sbjct: 310 TFVSILGACSSVKALAQGRLVHSHILER-GLDSEVAVATALVNMYAKCGSLEEARKVFNA 368
Query: 416 MKIEPDEVVWGSLLNG 431
MK D V W +L+
Sbjct: 369 MK-NRDAVAWSTLIGA 383
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 201/447 (44%), Gaps = 94/447 (21%)
Query: 64 YARF--------IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQF 115
YARF +F L T + + A+I A+ SQ S A ++++M + +PN
Sbjct: 152 YARFGSVGDAKRMFQSLQTRDETSWNAVILAH-SQSGDWSGALRIFKEM--KCDVKPNST 208
Query: 116 IYPHVLK--SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLF 173
Y +V+ S P+VL + +H +IV +GF+ VV TAL+N Y + G+ AR++F
Sbjct: 209 TYINVISGFSTPEVLPE--GRKIHAEIVANGFDTDLVVATALINMYGKCGSS-HEAREVF 265
Query: 174 DEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
D+M R++VSW MI Y GD F +A+
Sbjct: 266 DKMKKRDMVSWNVMIGCYVLNGD-------------------------------FHEALE 294
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
++++ ME + + T V L A L G+++H ++ GLD + ++ AL++
Sbjct: 295 LYQKLDME---GFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVN 351
Query: 294 MYGKCGSLKE----------------------------------ARRAFDRNSKKRLTSW 319
MY KCGSL+E AR+ FDR + SW
Sbjct: 352 MYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISW 411
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
N+MI ++ +G + ++ +F EM ++PD VTFI++L AC G + + +A
Sbjct: 412 NAMITTYVQNGCAVAAMKIFREMTGAA--GLKPDAVTFIAVLEACASLGRLSEVKALHAQ 469
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
++++ +E + L+++ R G EEA + K E V W +++ YGR
Sbjct: 470 ISES-ELESNVVVTNTLINMYARCGSLEEAERLFAAAK-EKTVVSWTAMVAAFSQYGR-- 525
Query: 440 FAE----FAVKKLIEIDPNNGGYGIML 462
+AE F L + P++ Y +L
Sbjct: 526 YAEALDLFQEMDLEGVKPDDVTYTSIL 552
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 195/421 (46%), Gaps = 94/421 (22%)
Query: 111 QPNQFIYPHVL---KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIG 167
QP+ + VL SC DV+E R +H +I S FE+ +V GN
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRA---LHERIRCSRFERDTMV-----------GN--- 46
Query: 168 IARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP--DRDVPAWNSVIAGCTQN 225
A+IS Y + + +A S+F+SM R+V +WN++IA QN
Sbjct: 47 ------------------ALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQN 88
Query: 226 GLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
G ++A+ + RM ++ + + VT V S +G L G+ IH V+ +GLD
Sbjct: 89 GHSTEALVLYWRMNLQ---GLGTDHVTFV---SVLGACSSLAQGREIHNRVFYSGLDSFQ 142
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
++NAL+ MY + GS+ +A+R F + TSWN++I + + G ++ +F+E M+C
Sbjct: 143 SLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKE-MKC 201
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRA-YFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
+++P+ T+I++++ + ++ +GR + +++ + + + L+++ G+ G
Sbjct: 202 ---DVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVAT--ALINMYGKCG 256
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGC-----------KIYGRTDFAEF---------- 443
EA EV MK + D V W ++ GC ++Y + D F
Sbjct: 257 SSHEAREVFDKMK-KRDMVSWNVMI-GCYVLNGDFHEALELYQKLDMEGFKRTKATFVSI 314
Query: 444 -----AVKKLIE------------IDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+VK L + +D + L N+Y + G +E RKV +K+R+
Sbjct: 315 LGACSSVKALAQGRLVHSHILERGLD-SEVAVATALVNMYAKCGSLEEARKVFNAMKNRD 373
Query: 487 A 487
A
Sbjct: 374 A 374
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 290/513 (56%), Gaps = 12/513 (2%)
Query: 16 VLAILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
++ ++ C + L+ ++ +F+ G + LV +K + + A+ +FD
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM-YMKCNAIDVAKRLFDEY 297
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
N L AM + Y Q A ++ M+ G +P++ + SC +
Sbjct: 298 GASNLDLCNAMASNYVRQ-GLTREALGVFNLMMDSG-VRPDRISMLSAISSCSQLRNILW 355
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
K H ++++GFE + + AL++ Y + A ++FD MS++ VV+W ++++GY
Sbjct: 356 GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ-DTAFRIFDRMSNKTVVTWNSIVAGYV 414
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
G++ A F++MP++++ +WN++I+G Q LF +AI F M+ + + + VT
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF--CSMQSQEGVNADGVT 472
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
++ SA GH G L L K I+ Y+ +NG+ LD + L+DM+ +CG + A F+ +
Sbjct: 473 MMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT 532
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+ +++W + I + A+ G +E +I +F++M+ + ++PDGV F+ L AC+HGGLV+Q
Sbjct: 533 NRDVSAWTAAIGAMAMAGNAERAIELFDDMI---EQGLKPDGVAFVGALTACSHGGLVQQ 589
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G+ F M K + + P+ HYGC+VDLLGRAG EEA+++++ M +EP++V+W SLL C
Sbjct: 590 GKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAAC 649
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
++ G + A +A +K+ + P G ++L+N+Y G+W+++ KVR +K++ K PG
Sbjct: 650 RVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPG 709
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
S I++ + H+F S D++HP I L+ +
Sbjct: 710 TSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEV 742
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 201/442 (45%), Gaps = 53/442 (11%)
Query: 8 LNQT-LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLV-RFCTLKL-SNLTY 64
LNQ+ + + L+ C I+ LK LT G KLV R C L +L++
Sbjct: 26 LNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSF 85
Query: 65 ARFIFDHLTTPNT-YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
A+ +F++ + T ++Y ++I YAS + A L+ M+ G P+++ +P L +
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASS-GLCNEAILLFLRMMNSG-ISPDKYTFPFGLSA 143
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
C +H IVK G+ + V+ +LV+ Y+
Sbjct: 144 CAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAE---------------------- 181
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
G++ +A +FD M +R+V +W S+I G + DA+ F RM +
Sbjct: 182 ----------CGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD-- 229
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
+ + PN VT+VC +SA L+ G+ ++ ++ +G++++ + +AL+DMY KC ++
Sbjct: 230 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A+R FD L N+M +++ G + ++ VF MM D +RPD ++ +S +++
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM---DSGVRPDRISMLSAISS 346
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHY----GCLVDLLGRAGRFEEALEVVKGMKIE 419
C+ + G++ Y + E + L+D+ + R + A + M
Sbjct: 347 CSQLRNILWGKS-----CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS-N 400
Query: 420 PDEVVWGSLLNGCKIYGRTDFA 441
V W S++ G G D A
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAA 422
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 155/469 (33%), Positives = 271/469 (57%), Gaps = 8/469 (1%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K + A+ +F+ L N+ +T +I + Q S + L+ M R +QF
Sbjct: 317 KCGSFKEAKRVFNSLQDRNSVSWTVLIGG-SLQYECFSKSVELFNQM-RAELMAIDQFAL 374
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
++ C + ++ + +H+ +KSG + VV +L++ Y++ G D+ A +F MS
Sbjct: 375 ATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCG-DLQNAEFVFSSMS 433
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+R++VSWT+MI+ Y+++G+I A FD M R+ WN+++ Q+G D + +
Sbjct: 434 ERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYS- 492
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M ++ P+ VT V G +LG I G+ + GL L+ ++NA I MY K
Sbjct: 493 -AMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSK 551
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG + EA++ FD + K + SWN+MI ++ HG + + F++M+ +PD +++
Sbjct: 552 CGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDML---SKGAKPDYISY 608
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+++L+ C+H GLV++G+ YF +MT+ + I P +EH+ C+VDLLGRAG EA +++ M
Sbjct: 609 VAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMP 668
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
++P VWG+LL+ CKI+G + AE A K + E+D + G ++LA IY + GK D+ +
Sbjct: 669 MKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQ 728
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
VRK+++D+ K PG SW+EV+ +VH F + D +HP+ I + ++ ++
Sbjct: 729 VRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELM 777
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 184/410 (44%), Gaps = 23/410 (5%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K +L+ A +FD + + + +++ Y Q + M R G PN F +
Sbjct: 83 KQGSLSDAEELFDRMPRRDVASWNTLMSGYF-QARRFLDGLETFVSMHRSGDSLPNAFTF 141
Query: 118 PHVLKSCPDVLESRGTKMVHTQIV----KSGFEQYPVVETALVNSYSRSGNDIGIARKLF 173
V+KSC + G + + Q++ K F P VETALV+ + R G + A +LF
Sbjct: 142 CCVMKSCGAL----GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGY-VDFASRLF 196
Query: 174 DEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
++ + +M++GY ++ I +A F+ M +RDV +WN +IA +Q+G +A+
Sbjct: 197 SQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALG 256
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
M + +R + T +L+A L GK +H V R+ +D ++++ALI+
Sbjct: 257 LVVEMHRK---GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIE 313
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
+Y KCGS KEA+R F+ + SW +I + S+ +F + MR + I D
Sbjct: 314 LYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQ-MRAELMAI--D 370
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
+L++ C + + GR L K+ I L+ L + G + A V
Sbjct: 371 QFALATLISGCFNRMDLCLGRQLHSLCLKSGH-NRAIVVSNSLISLYAKCGDLQNAEFVF 429
Query: 414 KGMKIEPDEVVWGSLLN-----GCKIYGRTDFAEFAVKKLIEIDPNNGGY 458
M E D V W S++ G I R F A + I + G Y
Sbjct: 430 SSMS-ERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAY 478
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 156/349 (44%), Gaps = 42/349 (12%)
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
L+SC G + +H ++V G ++ L+++Y G R L ++ +
Sbjct: 10 ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEP 69
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
NV++ M++GY + G + +A LFD MP RDV +WN++++G Q F D + F +
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF--VS 127
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
M S + PN T C + + G G +L + G ++ D + AL+DM+ +CG
Sbjct: 128 MHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCG 187
Query: 300 SLKEARRAFD---------RNS----------------------KKRLTSWNSMINSFAL 328
+ A R F RNS ++ + SWN MI + +
Sbjct: 188 YVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQ 247
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
G+ ++ + EM R +R D T+ S L AC + G+ +L K R P
Sbjct: 248 SGRVREALGLVVEMHR---KGVRLDSTTYTSSLTACARLFSLGWGK---QLHAKVIRSLP 301
Query: 389 QIEHY--GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
QI+ Y L++L + G F+EA V ++ + + V W L+ G Y
Sbjct: 302 QIDPYVASALIELYAKCGSFKEAKRVFNSLQ-DRNSVSWTVLIGGSLQY 349
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 39/219 (17%)
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR----- 306
L AL + G G L + +HG + GL F+ N L+ Y CG+L +ARR
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65
Query: 307 ---------------------------AFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
FDR ++ + SWN++++ + + + + F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK-TYRIEPQIEHYGCLVD 398
M R D P+ TF ++ +C G E L K + +P +E LVD
Sbjct: 126 VSMHRSGDS--LPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TALVD 181
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG-CKIYG 436
+ R G + A + ++ P S+L G K+YG
Sbjct: 182 MFVRCGYVDFASRLFSQIE-RPTIFCRNSMLAGYAKLYG 219
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 255/470 (54%), Gaps = 17/470 (3%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L AR D +T + AMI+ Y A ++R M G Q ++F Y VL
Sbjct: 241 LDAARQFLDGMTEKLVVAWNAMISGYVHH-GFFLEALEMFRKMYLLG-IQWDEFTYTSVL 298
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPV------VETALVNSYSRSGNDIGIARKLFDE 175
+C + K VH I+++ E P V AL Y + G + AR++F++
Sbjct: 299 SACANAGFFLHGKQVHAYILRT--EPRPSLDFSLSVNNALATLYWKCGK-VDEARQVFNQ 355
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
M +++VSW A++SGY G I A S F+ MP+R++ W +I+G QNG +++ F
Sbjct: 356 MPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLF 415
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
RM S+ P A+ A L G+ +H + R G D NALI MY
Sbjct: 416 NRMK---SEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMY 472
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCG ++ A F SWN+MI + HG ++ +FE M++ +I PD +
Sbjct: 473 AKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLK---EDILPDRI 529
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF+++L+ C+H GLVE+G YFK M+ Y I P +HY ++DLL RAG+F EA ++++
Sbjct: 530 TFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIET 589
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M +EP +W +LL GC+I+G D A ++L E+ P + G ++L+N+Y +G+WD+V
Sbjct: 590 MPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDV 649
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
KVRK+++D+ K PGCSWIEV+ +VH F D HP + +Y+ LE +
Sbjct: 650 AKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEEL 699
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 175/342 (51%), Gaps = 26/342 (7%)
Query: 60 SNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPH 119
SNL F L +T Y AMIT Y S A L+RD++R G +P+ F +
Sbjct: 97 SNLAREIFFATPLGIRDTVCYNAMITGY-SHNNDGFGAIELFRDLLRNGF-RPDNFTFTS 154
Query: 120 VLKSCPDVLE-SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGND--------IGIAR 170
VL + ++E + + +H +VKSG V AL++ + + + + AR
Sbjct: 155 VLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAAR 214
Query: 171 KLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSD 230
KLFDEM++R+ +SWT MI+GY R G++ A D M ++ V AWN++I+G +G F +
Sbjct: 215 KLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLE 274
Query: 231 AISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN----GLDLDSF 286
A+ FR+M + I+ ++ T LSA + G GK +H Y+ R LD
Sbjct: 275 ALEMFRKMYLL---GIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLS 331
Query: 287 ISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQ 346
++NAL +Y KCG + EAR+ F++ K L SWN++++ + G+ + + FEEM
Sbjct: 332 VNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEM---P 388
Query: 347 DHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
+ N+ +T+ +++ G E+ F M K+ EP
Sbjct: 389 ERNL----LTWTVMISGLAQNGFGEESLKLFNRM-KSEGFEP 425
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 190/444 (42%), Gaps = 72/444 (16%)
Query: 122 KSCP-DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
+ CP + + + VH ++ SGF+ + L++ Y +S +D+ A LFDE+ +
Sbjct: 22 QCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKS-SDLVSAHHLFDEIRQPD 80
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMP--DRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
+V+ T +I+ ++ G+ A +F + P RD +N++I G + N AI FR +
Sbjct: 81 IVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDL 140
Query: 239 GMEVSDNIRPNQVTLVCALSAIGH-TGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
+ + RP+ T L A+ + + IH V ++G + + NAL+ ++ K
Sbjct: 141 ---LRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVK 197
Query: 298 C----------------------------------------GSLKEARRAFDRNSKKRLT 317
C G L AR+ D ++K +
Sbjct: 198 CASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVV 257
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
+WN+MI+ + HG ++ +F +M I+ D T+ S+L+AC + G G+
Sbjct: 258 AWNAMISGYVHHGFFLEALEMFRKMYLL---GIQWDEFTYTSVLSACANAGFFLHGK--- 311
Query: 378 KLMTKTYRIEPQ------IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
++ R EP+ + L L + G+ +EA +V M ++ D V W ++L+G
Sbjct: 312 QVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVK-DLVSWNAILSG 370
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN----- 486
GR D A+ +++ E N + +M++ + + G +E K+ +K
Sbjct: 371 YVNAGRIDEAKSFFEEMPE--RNLLTWTVMISGL-AQNGFGEESLKLFNRMKSEGFEPCD 427
Query: 487 ---AYKTPGCSWIEVDKQVHQFHS 507
A C+W+ Q H+
Sbjct: 428 YAFAGAIIACAWLAALMHGRQLHA 451
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 155/469 (33%), Positives = 271/469 (57%), Gaps = 8/469 (1%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K + A+ +F+ L N+ +T +I + Q S + L+ M R +QF
Sbjct: 307 KCGSFKEAKRVFNSLQDRNSVSWTVLIGG-SLQYECFSKSVELFNQM-RAELMAIDQFAL 364
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
++ C + ++ + +H+ +KSG + VV +L++ Y++ G D+ A +F MS
Sbjct: 365 ATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCG-DLQNAEFVFSSMS 423
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+R++VSWT+MI+ Y+++G+I A FD M R+ WN+++ Q+G D + +
Sbjct: 424 ERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYS- 482
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M ++ P+ VT V G +LG I G+ + GL L+ ++NA I MY K
Sbjct: 483 -AMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSK 541
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG + EA++ FD + K + SWN+MI ++ HG + + F++M+ +PD +++
Sbjct: 542 CGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDML---SKGAKPDYISY 598
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+++L+ C+H GLV++G+ YF +MT+ + I P +EH+ C+VDLLGRAG EA +++ M
Sbjct: 599 VAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMP 658
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
++P VWG+LL+ CKI+G + AE A K + E+D + G ++LA IY + GK D+ +
Sbjct: 659 MKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQ 718
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
VRK+++D+ K PG SW+EV+ +VH F + D +HP+ I + ++ ++
Sbjct: 719 VRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELM 767
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 199/469 (42%), Gaps = 33/469 (7%)
Query: 8 LNQTLNQQVLAILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTY 64
L + Q + L C L + L L T+G + F L+ L L+
Sbjct: 15 LPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLH-AYLSCGALSD 73
Query: 65 ARFIF-DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY-----P 118
AR + + PN + M+ YA Q + S A L+ M RR N +
Sbjct: 74 ARRLLRADIKEPNVITHNIMMNGYAKQGS-LSDAEELFDRMPRRDVASWNTLMSDTSRPA 132
Query: 119 HVLKSCPDVLESRGTKMVHTQIV----KSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
SC + G + + Q++ K F P VETALV+ + R G + A +LF
Sbjct: 133 GSWMSCGAL----GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGY-VDFASRLFS 187
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
++ + +M++GY ++ I +A F+ M +RDV +WN +IA +Q+G +A+
Sbjct: 188 QIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGL 247
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
M + +R + T +L+A L GK +H V R+ +D ++++ALI++
Sbjct: 248 VVEMHRK---GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIEL 304
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KCGS KEA+R F+ + SW +I + S+ +F + MR + I D
Sbjct: 305 YAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQ-MRAELMAI--DQ 361
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
+L++ C + + GR L K+ I L+ L + G + A V
Sbjct: 362 FALATLISGCFNRMDLCLGRQLHSLCLKSGH-NRAIVVSNSLISLYAKCGDLQNAEFVFS 420
Query: 415 GMKIEPDEVVWGSLLN-----GCKIYGRTDFAEFAVKKLIEIDPNNGGY 458
M E D V W S++ G I R F A + I + G Y
Sbjct: 421 SMS-ERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAY 468
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 260/470 (55%), Gaps = 38/470 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L A+ +FD + + + ++I AY Q S+A ++ M G
Sbjct: 269 KFGRLQDAQMVFDQMEVRDLVSWNSIIAAY-EQNNDPSTALRFFKGMQLGGIR------- 320
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
PD+L + +Q+ SRS I R E
Sbjct: 321 -------PDLLTVVSLTSIFSQLSD--------------QRISRSILGFVIRR----EWL 355
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
D++VV A+++ Y ++G + A ++FD +P +D +WN+++ G TQNGL S+AI +
Sbjct: 356 DKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNM 415
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M E D I PNQ T V + A H G LQ G IH + +N L LD F++ LID+YGK
Sbjct: 416 ME-ECRDTI-PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGK 473
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG L++A F + WN++I S +HG+ E ++ +F++M+ ++ D +TF
Sbjct: 474 CGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLA---ERVKADHITF 530
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+SLL+AC+H GLV++G+ F +M K Y I+P ++HYGC+VDLLGRAG E+A E+V+ M
Sbjct: 531 VSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMP 590
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
I+PD +WG+LL+ CKIYG + A +L+E+D N GY ++L+NIY KW+ V K
Sbjct: 591 IQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIK 650
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
VR + +DR KTPG S + V + F++ ++THP+ EIY L+ + A
Sbjct: 651 VRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSA 700
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 124/499 (24%), Positives = 231/499 (46%), Gaps = 89/499 (17%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
A+ C ++N K+L + L G+SQ + KL+ +++ +R FD++ N
Sbjct: 27 ALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTH-GDISLSRSTFDYIHKKNI 85
Query: 78 YLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ + ++I+AY + A + + M G +P+ + +P +LK+C +++ K
Sbjct: 86 FSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDG---KK 142
Query: 136 VHTQIVKSG--------------FEQYPVVETA-----------------LVNSYSRSGN 164
VH + K G + +Y V++ A +++ + ++GN
Sbjct: 143 VHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGN 202
Query: 165 DIGIARKLFDEMS---------------------------------------DRNVVSWT 185
G A + + M D +V
Sbjct: 203 AAG-ALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSN 261
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
A+I+ Y++ G +++A +FD M RD+ +WNS+IA QN S A+ FF+ GM++
Sbjct: 262 ALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFK--GMQLG-G 318
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVY-RNGLDLDSFISNALIDMYGKCGSLKEA 304
IRP+ +T+V S ++ + I G+V R LD D I NAL++MY K G + A
Sbjct: 319 IRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCA 378
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
FD+ +K SWN+++ + +G + +I + M C+D P+ T++S++ A
Sbjct: 379 HTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRD--TIPNQGTWVSIIPAY 436
Query: 365 THGGLVEQG-RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD-E 422
+H G ++QG + + KL+ + ++ + CL+DL G+ GR E+A+ + +I D
Sbjct: 437 SHVGALQQGMKIHAKLIKNSLYLDVFVA--TCLIDLYGKCGRLEDAMSLF--YEIPRDTS 492
Query: 423 VVWGSLLNGCKIYGRTDFA 441
V W +++ I+GR + A
Sbjct: 493 VPWNAIIASLGIHGRGEEA 511
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 260/470 (55%), Gaps = 38/470 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L A+ +FD + + + ++I AY Q S+A ++ M G
Sbjct: 269 KFGRLQDAQMVFDQMEVRDLVSWNSIIAAY-EQNNDPSTALRFFKGMQLGGIR------- 320
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
PD+L + +Q+ SRS I R E
Sbjct: 321 -------PDLLTVVSLTSIFSQLSD--------------QRISRSILGFVIRR----EWL 355
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
D++VV A+++ Y ++G + A ++FD +P +D +WN+++ G TQNGL S+AI +
Sbjct: 356 DKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNM 415
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M E D I PNQ T V + A H G LQ G IH + +N L LD F++ LID+YGK
Sbjct: 416 ME-ECRDTI-PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGK 473
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG L++A F + WN++I S +HG+ E ++ +F++M+ ++ D +TF
Sbjct: 474 CGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLA---ERVKADHITF 530
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+SLL+AC+H GLV++G+ F +M K Y I+P ++HYGC+VDLLGRAG E+A E+V+ M
Sbjct: 531 VSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMP 590
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
I+PD +WG+LL+ CKIYG + A +L+E+D N GY ++L+NIY KW+ V K
Sbjct: 591 IQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIK 650
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
VR + +DR KTPG S + V + F++ ++THP+ EIY L+ + A
Sbjct: 651 VRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSA 700
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 124/499 (24%), Positives = 231/499 (46%), Gaps = 89/499 (17%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
A+ C ++N K+L + L G+SQ + KL+ +++ +R FD++ N
Sbjct: 27 ALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTH-GDISLSRSTFDYIHKKNI 85
Query: 78 YLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ + ++I+AY + A + + M G +P+ + +P +LK+C +++ K
Sbjct: 86 FSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDG---KK 142
Query: 136 VHTQIVKSG--------------FEQYPVVETA-----------------LVNSYSRSGN 164
VH + K G + +Y V++ A +++ + ++GN
Sbjct: 143 VHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGN 202
Query: 165 DIGIARKLFDEMS---------------------------------------DRNVVSWT 185
G A + + M D +V
Sbjct: 203 AAG-ALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSN 261
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
A+I+ Y++ G +++A +FD M RD+ +WNS+IA QN S A+ FF+ GM++
Sbjct: 262 ALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFK--GMQLG-G 318
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVY-RNGLDLDSFISNALIDMYGKCGSLKEA 304
IRP+ +T+V S ++ + I G+V R LD D I NAL++MY K G + A
Sbjct: 319 IRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCA 378
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
FD+ +K SWN+++ + +G + +I + M C+D P+ T++S++ A
Sbjct: 379 HTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRD--TIPNQGTWVSIIPAY 436
Query: 365 THGGLVEQG-RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD-E 422
+H G ++QG + + KL+ + ++ + CL+DL G+ GR E+A+ + +I D
Sbjct: 437 SHVGALQQGMKIHAKLIKNSLYLDVFVA--TCLIDLYGKCGRLEDAMSLF--YEIPRDTS 492
Query: 423 VVWGSLLNGCKIYGRTDFA 441
V W +++ I+GR + A
Sbjct: 493 VPWNAIIASLGIHGRGEEA 511
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 169/513 (32%), Positives = 287/513 (55%), Gaps = 46/513 (8%)
Query: 18 AILERCNHIN--HLKQLQSFLTTLGQSQTNFYAF--KLVRFCTLKLSNLTYARFIFDHLT 73
+ L +C ++ H KQL + L T GQ + KL+ L L NL++A F +
Sbjct: 7 SFLSKCTTLSLPHTKQLHAHLFTTGQFRLPISPARSKLLELYALSLGNLSFAILTFSQIR 66
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
TP+T + A+I + P + ++AF+ Y+ M+ + + + + VLK+C VL +
Sbjct: 67 TPSTNDWNAIIRGFIQSP-NPTNAFAWYKSMISKSR-KVDALTCSFVLKACARVLARLES 124
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+HT IV+ GF + AL+ T ++ Y +
Sbjct: 125 IQIHTHIVRKGF-----IADALLG---------------------------TTLLDVYAK 152
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
VG+I +A +FD M RD+ +WN++I+G Q ++A+S F+RM + D +PN++++
Sbjct: 153 VGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRMEI---DGFKPNEISV 209
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS- 312
+ ALSA G + G+ IHGY+ D+++ + N +IDMY KCG + +A F+ S
Sbjct: 210 LGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNVVIDMYAKCGFVDKAYLVFESMSC 269
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+K + +WN+MI +FA+HG+ ++ +FE+M + PD V+++++L AC HGGLVE+
Sbjct: 270 RKDIVTWNTMIMAFAMHGEGCKALELFEKM---DQSGVSPDDVSYLAVLCACNHGGLVEE 326
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G F M + ++P ++HYG +VDLLGRAGR EA ++V M PD V+W +LL
Sbjct: 327 GFRLFNSM-ENCGVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVLWQTLLGAS 385
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+ + + AE +KL+E+ N+ G ++L+N+Y +W +V +VR+ +K+R+ K PG
Sbjct: 386 RTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARERWADVGRVREAMKNRDVKKVPG 445
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
S+IE + +H+F++ DK+H EIY L+ +
Sbjct: 446 LSYIEGNGVIHKFYNADKSHESWREIYAKLDEI 478
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 23/260 (8%)
Query: 15 QVLAILERCNHINHLKQLQSFLTT--LGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
+VLA LE H+ + + F+ LG + + YA K+ + A +FD +
Sbjct: 117 RVLARLESIQIHTHIVR-KGFIADALLGTTLLDVYA---------KVGEIDSAEKVFDEM 166
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
+ + A+I+ +A Q + + A SL++ M G +PN+ L +C + + +
Sbjct: 167 VKRDIASWNALISGFA-QGSKPTEALSLFKRMEIDGF-KPNEISVLGALSACAQLGDFKE 224
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR-NVVSWTAMISGY 191
+ +H I F+ V +++ Y++ G + A +F+ MS R ++V+W MI +
Sbjct: 225 GEKIHGYIKVERFDMNAQVCNVVIDMYAKCGF-VDKAYLVFESMSCRKDIVTWNTMIMAF 283
Query: 192 TRVGDIKNAASLFDSMPDRDVP----AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
G+ A LF+ M V ++ +V+ C GL + F M + ++
Sbjct: 284 AMHGEGCKALELFEKMDQSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSME---NCGVK 340
Query: 248 PNQVTLVCALSAIGHTGMLQ 267
PN + +G G L
Sbjct: 341 PNVKHYGSVVDLLGRAGRLH 360
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 174/500 (34%), Positives = 276/500 (55%), Gaps = 16/500 (3%)
Query: 4 VTNQLNQTL--NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN 61
++N++ L +Q + ++ E C + LK + + K+ RF + +
Sbjct: 230 ISNKVMHMLPTSQSLASMAEACLAMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNG 289
Query: 62 -LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
L YA +F + PNT+ Y +I Y+ + + S L+ M RR P+ F + +
Sbjct: 290 CLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSV-QLFNQM-RRNCVDPDGFTFTFL 347
Query: 121 LKSCP----DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
LK D+ + +H ++K GF + V AL++ Y+ G A ++F+EM
Sbjct: 348 LKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAA-AHQVFNEM 406
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+VVSW+ ++ + R G+++ A +FD MP+RDV +W +++G Q +A+ FR
Sbjct: 407 VGADVVSWSGLVVAHVRAGELELARQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFR 466
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M +RP++V +V +SA G L+ G +H Y+ NG + NALIDMY
Sbjct: 467 EMR---DVGVRPDEVAMVIVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYA 523
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG + A + F+ +K L +WNSMI++ A HG +E++ VF M+ IRPDGVT
Sbjct: 524 KCGCMDLAWQVFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLXS---GIRPDGVT 580
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
F++LL A TH G V+ G F+ M + Y +E +EHYGC+VD+LGRAGR EEA +++ M
Sbjct: 581 FLALLTAYTHKGWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSM 640
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
+ ++VVWG+LL C+IYG + E +KKLIE+ P+ GGY I+L +IY G+ E
Sbjct: 641 SMPCNDVVWGALLAACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAI 700
Query: 477 KVRKMLKDRNAYKTPGCSWI 496
++R+ + A KT GCSW+
Sbjct: 701 ELRRAMDVNGAKKTLGCSWV 720
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 171/500 (34%), Positives = 257/500 (51%), Gaps = 45/500 (9%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
++ + + AR +FD + N + MI YA + A L+ M R N I
Sbjct: 140 VRWNRIEEARRLFDAMPVKNVISWNTMIEGYA-RKGWIDQALDLFEKMPERNVVSWNTVI 198
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ + D + +M ++ T +V S++G I AR LFD+M
Sbjct: 199 TAFMQRRRVDEAQELFNRMPERDVISW---------TTMVAGLSKNGR-IDDARLLFDKM 248
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
RNVVSW MI GY + + A LF+ MP+R++ +WN++I G QNG A+ FF
Sbjct: 249 PVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFY 308
Query: 237 RMG-----------------------------MEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
+M M+ ++N++PN+ T V L A L
Sbjct: 309 KMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALC 368
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS--KKRLTSWNSMINS 325
G+ IH + + + + +ALI+MY KCG L+ AR+ FD S + + SWN MI +
Sbjct: 369 EGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAA 428
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
+A HG +I +F+EM Q RPD VT+I+LL+AC+H GLV++G F+ + +
Sbjct: 429 YAHHGHGHKAISLFDEM---QALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRS 485
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
I+ + +H+ CLVDL GRAGR +EA + +KG++++P VW +LL GC ++G D +
Sbjct: 486 IKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTA 545
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
+KL+E +P N G ++L+NIY GKW E VR +KD+ K PGCSWIEV VH F
Sbjct: 546 EKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVF 605
Query: 506 HSLDKTHPRTEEIYDALESM 525
D +H E IY L +
Sbjct: 606 VVGDNSHREFENIYLLLHDL 625
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 54/274 (19%)
Query: 168 IARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGL 227
I+ + D ++ NV +I+ + G I A +F+ MPDRDV +W +VI G + G+
Sbjct: 53 ISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGM 112
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
+A + F R +D I+ N VT
Sbjct: 113 IEEAKTLFDR-----NDAIK-NVVTW---------------------------------- 132
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
AL+ Y + ++EARR FD K + SWN+MI +A G + ++ +FE+M +
Sbjct: 133 -TALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKM---PE 188
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE 407
N+ V++ +++ A V++ + F M E + + +V L + GR +
Sbjct: 189 RNV----VSWNTVITAFMQRRRVDEAQELFNRMP-----ERDVISWTTMVAGLSKNGRID 239
Query: 408 EALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+A + M + + V W +++ G R D A
Sbjct: 240 DARLLFDKMPVR-NVVSWNTMIIGYAQNMRLDEA 272
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 163/489 (33%), Positives = 257/489 (52%), Gaps = 49/489 (10%)
Query: 37 TTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASS 96
LG + + YA K + AR IFD + N ++AMI AY
Sbjct: 166 VILGTAMIDMYA---------KCGCVESAREIFDRMEEKNVISWSAMIAAYGYH-GQGRK 215
Query: 97 AFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALV 156
A L+R M+ G P++ +L +C D+ + +++H + K G + V ALV
Sbjct: 216 ALDLFRMMLSSGM-LPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALV 274
Query: 157 NSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWN 216
+ Y + +I++A LFD MP+RD+ W
Sbjct: 275 DMYGKCR--------------------------------EIEDARFLFDKMPERDLVTWT 302
Query: 217 SVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV 276
+I G + G ++++ F +M E + P++V +V + A G + + I Y+
Sbjct: 303 VMIGGYAECGNANESLVLFDKMREE---GVVPDKVAMVTVVFACAKLGAMHKARTIDDYI 359
Query: 277 YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSI 336
R LD + A+IDM+ KCG ++ AR FDR +K + SW++MI ++ HGQ ++
Sbjct: 360 QRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKAL 419
Query: 337 CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCL 396
+F M+R I P+ +T +SLL AC+H GLVE+G +F LM + Y + ++HY C+
Sbjct: 420 DLFPMMLR---SGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCV 476
Query: 397 VDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNG 456
VDLLGRAGR +EAL++++ M +E DE +WG+ L C+ + AE A L+E+ P N
Sbjct: 477 VDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNP 536
Query: 457 GYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTE 516
G+ I+L+NIY G+W++V K R ++ R K PG +WIEVD + HQF D THPR++
Sbjct: 537 GHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSK 596
Query: 517 EIYDALESM 525
EIY+ L+S+
Sbjct: 597 EIYEMLKSL 605
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 96 SAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETAL 155
+ F +R+++R G +P+ + P V+++C D+ + +++H + K G + V AL
Sbjct: 13 NCFGTFRELIRCG-ARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAAL 71
Query: 156 VNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAW 215
V+ Y + +I AR LFD+M +R++V+WT MI GY G + LF+ M +
Sbjct: 72 VDMYVKC-REIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMRE------ 124
Query: 216 NSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGY 275
+ + P++V +V + A G + ++I Y
Sbjct: 125 ----------------------------EGVVPDKVAMVTVVFACAKLGAMHKARIIDDY 156
Query: 276 VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
+ R LD + A+IDMY KCG ++ AR FDR +K + SW++MI ++ HGQ +
Sbjct: 157 IQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 216
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ +F M+ + PD +T SLL AC+ ++ GR ++ Y+ ++H+ C
Sbjct: 217 LDLFRMML---SSGMLPDKITLASLLYACSDLKNLQMGRLIHHIV---YKFGLDLDHFVC 270
Query: 396 --LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
LVD+ G+ E+A + M E D V W ++ G
Sbjct: 271 AALVDMYGKCREIEDARFLFDKMP-ERDLVTWTVMIGG 307
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 199/422 (47%), Gaps = 46/422 (10%)
Query: 19 ILERCNHINHLKQ---LQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
++ C + +L+ + + G +F LV +K + ARF+FD +
Sbjct: 36 VIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDM-YVKCREIEDARFLFDKMQER 94
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ +T MI YA + A+ + L+ M G P++ V+ +C + ++
Sbjct: 95 DLVTWTVMIGGYA-ECGKANESLVLFEKMREEG-VVPDKVAMVTVVFACAKLGAMHKARI 152
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+ I + F+ ++ TA+++ Y++ G + AR++FD M ++NV+SW+AMI+ Y G
Sbjct: 153 IDDYIQRKKFQLDVILGTAMIDMYAKCGC-VESAREIFDRMEEKNVISWSAMIAAYGYHG 211
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
+ A LF M +S + P+++TL
Sbjct: 212 QGRKALDLFRMM----------------------------------LSSGMLPDKITLAS 237
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
L A LQ+G++IH VY+ GLDLD F+ AL+DMYGKC +++AR FD+ ++
Sbjct: 238 LLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERD 297
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
L +W MI +A G + S+ +F++M ++ + PD V ++++ AC G + + R
Sbjct: 298 LVTWTVMIGGYAECGNANESLVLFDKM---REEGVVPDKVAMVTVVFACAKLGAMHKART 354
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
+ + + + + ++D+ + G E A E+ M+ E + + W +++ +
Sbjct: 355 IDDYIQRK-KFQLDVILGTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYH 412
Query: 436 GR 437
G+
Sbjct: 413 GQ 414
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 114/220 (51%), Gaps = 8/220 (3%)
Query: 218 VIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVY 277
++ G + G + + FR + + RP+ TL + A LQ+G++IH VY
Sbjct: 1 MVGGFAKVGDYINCFGTFREL---IRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVY 57
Query: 278 RNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSIC 337
+ GLDLD F+ AL+DMY KC +++AR FD+ ++ L +W MI +A G++ S+
Sbjct: 58 KFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLV 117
Query: 338 VFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLV 397
+FE+M ++ + PD V ++++ AC G + + R + + + + + ++
Sbjct: 118 LFEKM---REEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRK-KFQLDVILGTAMI 173
Query: 398 DLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
D+ + G E A E+ M+ E + + W +++ +G+
Sbjct: 174 DMYAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQ 212
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 257/461 (55%), Gaps = 42/461 (9%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
N+ A+ +FD + + + AMI+ YA ++ A L+++M++ +P++ V
Sbjct: 147 NIRSAQEMFDEIPVKDVVSWNAMISGYAETGSY-KEALELFKEMMKT-NVRPDEGTMVTV 204
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
L +C + VH+ I GF G+++ I
Sbjct: 205 LSACAQSRSVELGRQVHSWIDDHGF-----------------GSNLKIV----------- 236
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
A+I Y++ G ++ A LF+ + +DV +WN++I G T L+ +A+ F+ M
Sbjct: 237 ----NALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEM-- 290
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS--NALIDMYGKC 298
+ PN VT+V L A H G + +G+ IH Y+ + D+ + S +LIDMY KC
Sbjct: 291 -LRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKC 349
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G ++ A + F+ K L+SWN+MI FA+HG++ +F M + + I PD +TF+
Sbjct: 350 GDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRK---NGIEPDDITFV 406
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
LL+AC+H G ++ GR FK MT+ Y I P++EHYGC++DLLG +G F+EA E++K M +
Sbjct: 407 GLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPM 466
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
EPD V+W SLL C+ +G + AE + L++++P N G ++L+NIY G+WDEV KV
Sbjct: 467 EPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKV 526
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
R +L + K PGCS IE+D +VH+F DK HPR EIY
Sbjct: 527 RALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIY 567
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 141/477 (29%), Positives = 237/477 (49%), Gaps = 58/477 (12%)
Query: 50 KLVRFCTLK--LSNLTYARFIFDHLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMV 105
KL+ FC L YA +F + PN ++ M+ YA S P SA LY M+
Sbjct: 2 KLLEFCVLSPHFDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPV---SALKLYVVMI 58
Query: 106 RRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGND 165
G PN + +P +LKSC + +H ++K G+E V T+L++ Y+++G
Sbjct: 59 SLGL-LPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGR- 116
Query: 166 IGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQN 225
+ A K+FD S R+VVS+TA+I+GY G+I++A +FD +P +DV +WN++I+G +
Sbjct: 117 LEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAET 176
Query: 226 GLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
G + +A+ F+ M + N+RP++ T+V LSA + ++LG+ +H ++ +G +
Sbjct: 177 GSYKEALELFKEM---MKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNL 233
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
I NALID+Y KCG ++ A F+ S K + SWN++I + + ++ +F+EM+R
Sbjct: 234 KIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRS 293
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGR---AYFKLMTKTYRIEPQIEHYGCLVDLLGR 402
+ P+ VT +S+L AC H G ++ GR Y K P + L+D+ +
Sbjct: 294 GE---SPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLR--TSLIDMYAK 348
Query: 403 AGRFEEALEVVKGM----------------------------------KIEPDEVVWGSL 428
G E A +V M IEPD++ + L
Sbjct: 349 CGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGL 408
Query: 429 LNGCKIYGRTDFAEFAVKKLIE---IDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
L+ C G+ D K + + I P YG M+ ++ G G + E +++ K +
Sbjct: 409 LSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMI-DLLGHSGLFKEAKEMIKTM 464
>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 163/479 (34%), Positives = 262/479 (54%), Gaps = 40/479 (8%)
Query: 50 KLVRFCTLKLS-NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHAS-SAFSLYRDMVRR 107
KL+ FC + +S +L YA+ +F + P T + +MI ++ P+ A Y M+
Sbjct: 435 KLLNFCAVSVSGSLAYAQLVFHRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSA 494
Query: 108 GQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIG 167
+P+ + + +LK+C + E + VH I++ G++Q V+ T L+ SY+ GN
Sbjct: 495 SHARPDTYTFSFLLKACEEAKEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYA--GN--- 549
Query: 168 IARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGL 227
G I+ A +F+ MP RD+ +WNS+I+ Q GL
Sbjct: 550 ---------------------------GLIETAHKVFEEMPARDLVSWNSMISCYCQTGL 582
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
+A+ + +M + N+ + TLV LS+ H G L +G +H + L + F+
Sbjct: 583 HEEALKMYDQMRI---SNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFV 639
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
NALIDMY KCGSL A F+ K+ + +WNSMI + +HG+ + +I F M+
Sbjct: 640 GNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMA-- 697
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE 407
+RP+ +TF+ LL C+H GLV++G YF +M+ + ++P I+HYGC+VDL GRAG+ +
Sbjct: 698 -GVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLK 756
Query: 408 EALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYG 467
EALEV++ + D V+W +LL CKI+ + E A++ L+++ G ++L+ IY
Sbjct: 757 EALEVIRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYA 816
Query: 468 ELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
E V ++RK+++ R TPG SWIEV QVH+F DK+HP + EIY LE ++
Sbjct: 817 EAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVI 875
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 165/479 (34%), Positives = 275/479 (57%), Gaps = 30/479 (6%)
Query: 56 TLKLSNLTYARFIFDHL----TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQ 111
L + + R + H+ + +T++ A+I AY S+ S A ++ +M R
Sbjct: 445 ALSAAGVAPVRAVHSHVVKLGSVEDTFVGNALIDAY-SKNGGFSDARKVFDEMPERDVVS 503
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVET----ALVNSYSRSGNDIG 167
N + V + E G + + F++ P +T +++ Y+++G ++
Sbjct: 504 WNTAMAAMVREG-----ELAGVRKL--------FDEMPEKDTVSWNTILDGYTKAG-EVE 549
Query: 168 IARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGL 227
A +LF M +RNVVSW+ M+SGY + GD++ A +FD MP +++ W +++ C Q GL
Sbjct: 550 AAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGL 609
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
+A F +M E S + + +V L+A +G L LGK IH YV + L + +
Sbjct: 610 VDEAGKLFAQM-KEAS--VELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHV 666
Query: 288 SNALIDMYGKCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQ 346
NALIDM+ KCG + A FD + +K SWNS+I FA+HG + ++ +F +M +
Sbjct: 667 CNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQM---K 723
Query: 347 DHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRF 406
PD VT I++L+ACTH G V++GR +F M + Y I PQIEHYGC++DLLGR G
Sbjct: 724 QQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLI 783
Query: 407 EEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIY 466
+EA++++K M EP+EV+WGSLL+ C+++ ++AE AV +L ++ P+N G +L+NIY
Sbjct: 784 KEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIY 843
Query: 467 GELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
E G+W ++ K R +K + KT G SW+E+++ H+F D+ H +++I + ++ +
Sbjct: 844 AEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRL 902
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 20/236 (8%)
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
L+ ALSA G + + +H +V + G D+F+ NALID Y K G +AR+ FD
Sbjct: 442 LIKALSAAGVAPV----RAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMP 497
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
++ + SWN+ + + G+ +F+EM D V++ ++L+ T G VE
Sbjct: 498 ERDVVSWNTAMAAMVREGELAGVRKLFDEM-------PEKDTVSWNTILDGYTKAGEVEA 550
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
F+ M E + + +V + G E A + M + + V W +++ C
Sbjct: 551 AFELFQRMP-----ERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSK-NLVTWTIMVSAC 604
Query: 433 KIYGRTDFAE--FAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
G D A FA K ++ + +LA E G +++ + ++ RN
Sbjct: 605 AQKGLVDEAGKLFAQMKEASVELDVAAVVSILAAC-AESGSLSLGKRIHRYVRKRN 659
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 164/473 (34%), Positives = 271/473 (57%), Gaps = 13/473 (2%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K + L A ++FD + + + +++TAY +Q + S++ M + QP+ F+Y
Sbjct: 49 KCNLLQDAHYLFDEMPQRDHVSWASILTAY-NQAKLPNKTLSIFHYMFTTDRLQPDHFVY 107
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+LK+C + R K VH + V S F VV+++LV+ Y++ G IAR +FD +
Sbjct: 108 ATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLP-SIARSVFDSIL 166
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF-- 235
+ VSWTAM+SGY R G A LF P R++ +W ++I+G Q+G D F
Sbjct: 167 VKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIE 226
Query: 236 -RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
RR G+++ D + + V CA A+ L LGK IHG V +G + FISNAL+DM
Sbjct: 227 MRREGVDIVDPLVLSSVVGACANLAV-----LGLGKQIHGLVIGSGYESCLFISNALVDM 281
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KC + AR F+R + + SW S+I A HG+++ ++ ++++M+ + I+P+
Sbjct: 282 YAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAE---IKPNE 338
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
VTF+ L+ AC+H GLV +GR FK M + YRI P ++ + C +DLL R+G EA +++K
Sbjct: 339 VTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIK 398
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M +PDE W +LL+ CK +G T+ +L+ ++ + ++L+N+Y GKW++
Sbjct: 399 TMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQ 458
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+ +VRK++ D + PG S I++ K+ FH+ + HP +EI+ L+ + A
Sbjct: 459 MSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGETCHPMKDEIFGLLKELDA 511
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 156/399 (39%), Gaps = 73/399 (18%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
Y H LK C K +H QIVKSG Q + L+++Y +
Sbjct: 5 YLHRLKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNL------------ 52
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+++A LFD MP RD +W S++ Q L + +S F
Sbjct: 53 --------------------LQDAHYLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFH 92
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M +D ++P+ L A L+LGK +H + D + ++L+DMY
Sbjct: 93 YMF--TTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYA 150
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF----------------- 339
KCG AR FD K SW +M++ +A G + ++ +F
Sbjct: 151 KCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISG 210
Query: 340 -EEMMRCQDH-----NIRPDGVTFI------SLLNACTHGGLVEQGRAYFKLMTKTYRIE 387
+ C D +R +GV + S++ AC + ++ G+ L+ + E
Sbjct: 211 LVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGS-GYE 269
Query: 388 PQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKK 447
+ LVD+ + A V M + D V W S++ G +GR A +
Sbjct: 270 SCLFISNALVDMYAKCSDILAARNVFNRM-LHRDVVSWTSIIVGAAQHGRAKEALDLYDQ 328
Query: 448 LI--EIDPNNGGY-GIMLANIYGELGKWDEVRKVRKMLK 483
++ EI PN + G++ A + L V K RK+ K
Sbjct: 329 MVLAEIKPNEVTFVGLIYACSHAGL-----VSKGRKLFK 362
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 165/476 (34%), Positives = 267/476 (56%), Gaps = 46/476 (9%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMV---RRGQPQP-- 112
K L+ AR +FD + N +T++IT Y Q A A ++++ + G +
Sbjct: 129 KCGKLSNARVLFDEIPRRNIVTWTSLITGYV-QNDDAHEALMVFKEFLFEKSEGNGEEVG 187
Query: 113 ---NQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIA 169
+ VL +C V ++ VH +K G ++ VE L+++Y++ G ++ ++
Sbjct: 188 TSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCG-EVSLS 246
Query: 170 RKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
RK+FD+M++++VVSW +MI+ Y QNGL +
Sbjct: 247 RKVFDDMAEKDVVSWNSMIAVY-------------------------------AQNGLST 275
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
DA F GM + + N+VTL L A H G L++G +H V + G + ++
Sbjct: 276 DAFEVFH--GMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMAT 333
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
++IDMY KCG + AR AFD +K + SW +MI + +HG + ++ VF +M+
Sbjct: 334 SIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWA---G 390
Query: 350 IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEA 409
++P+ +TFIS+L AC+H G +E+G +F M+ Y +EP +EHYGC+VDLLGRAG +EA
Sbjct: 391 VKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEA 450
Query: 410 LEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGEL 469
++K MK+ D V+WGSLL C+I+ + AE + ++L ++DP+N GY ++LANIY +
Sbjct: 451 YNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADA 510
Query: 470 GKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
G+W +V ++R ++KDR K PG S +E+ +VH F DK HP+ E+IY LE +
Sbjct: 511 GRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEEL 566
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 173/392 (44%), Gaps = 39/392 (9%)
Query: 56 TLKLSNLTYARFIFDHLTTPNTYLYTAMIT--AYASQPAHASSAFSLYRDMVRRGQPQPN 113
T +N + + Y + ++I A + AFS R + +PN
Sbjct: 26 TAAATNTNLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKL----DIKPN 81
Query: 114 QFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLF 173
+ +P +KSC + + K H Q + GFE V +AL++ YS+ G + AR LF
Sbjct: 82 RSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGK-LSNARVLF 140
Query: 174 DEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
DE+ RN+V+WT++I+GY + D A +F LF +
Sbjct: 141 DEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEF-------------------LFEKSEG 181
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
+G V + V ++ LSA + + +HG + GLD + N L+D
Sbjct: 182 NGEEVGTSV------DSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLD 235
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
Y KCG + +R+ FD ++K + SWNSMI +A +G S ++ VF M++ + +
Sbjct: 236 AYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGG--KYN 293
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
VT +LL AC H G + G + K + I ++D+ + G+ E A
Sbjct: 294 EVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATS-IIDMYCKCGQAEMARNAF 352
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
GMK E + W +++ G YG FA A+
Sbjct: 353 DGMK-EKNVRSWTAMIAG---YGMHGFAREAL 380
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 171/500 (34%), Positives = 257/500 (51%), Gaps = 45/500 (9%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
++ + + AR +FD + N + MI YA + A L+ M R N I
Sbjct: 140 VRWNRIEEARRLFDAMPVKNVISWNTMIEGYA-RKGWIDQALDLFEXMPERNVVSWNTVI 198
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ + D + +M ++ T +V S++G I AR LFD+M
Sbjct: 199 TAFMQRRRVDEAQELFNRMPERDVISW---------TTMVAGLSKNGR-IDDARLLFDKM 248
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
RNVVSW MI GY + + A LF+ MP+R++ +WN++I G QNG A+ FF
Sbjct: 249 PVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFY 308
Query: 237 RMG-----------------------------MEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
+M M+ ++N++PN+ T V L A L
Sbjct: 309 KMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALC 368
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS--KKRLTSWNSMINS 325
G+ IH + + + + +ALI+MY KCG L+ AR+ FD S + + SWN MI +
Sbjct: 369 EGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAA 428
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
+A HG +I +F+EM Q RPD VT+I+LL+AC+H GLV++G F+ + +
Sbjct: 429 YAHHGHGHKAISLFDEM---QALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRS 485
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
I+ + +H+ CLVDL GRAGR +EA + +KG++++P VW +LL GC ++G D +
Sbjct: 486 IKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTA 545
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
+KL+E +P N G ++L+NIY GKW E VR +KD+ K PGCSWIEV VH F
Sbjct: 546 EKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVF 605
Query: 506 HSLDKTHPRTEEIYDALESM 525
D +H E IY L +
Sbjct: 606 VVGDNSHREFENIYLLLHDL 625
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 117/274 (42%), Gaps = 54/274 (19%)
Query: 168 IARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGL 227
I+ + D ++ NV +I+ + G I A +F+ MPDRDV +W +VI G + G+
Sbjct: 53 ISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGM 112
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
+A + F R +D I+ N VT
Sbjct: 113 IEEAKTLFDR-----NDAIK-NVVTW---------------------------------- 132
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
AL+ Y + ++EARR FD K + SWN+MI +A G + ++ +FE M +
Sbjct: 133 -TALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXM---PE 188
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE 407
N+ V++ +++ A V++ + F M E + + +V L + GR +
Sbjct: 189 RNV----VSWNTVITAFMQRRRVDEAQELFNRMP-----ERDVISWTTMVAGLSKNGRID 239
Query: 408 EALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+A + M + + V W +++ G R D A
Sbjct: 240 DARLLFDKMPVR-NVVSWNTMIIGYAQNMRLDEA 272
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 165/448 (36%), Positives = 257/448 (57%), Gaps = 23/448 (5%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K NL AR FD + + + AM++ YA Q L+ DM+ G QP++ +
Sbjct: 197 KKGNLKTARMYFDKMPERSVVSWNAMLSGYA-QGGAPEETIRLFNDMLSPGNVQPDETTW 255
Query: 118 PHVLKSCPDVLESRGTKMVHTQIV-----KSGFEQYPVVETALVNSYSRSGNDIGIARKL 172
V+ SC S G + IV K GF V+TAL++ +++ GN + A K+
Sbjct: 256 ATVISSC----SSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGN-LEAAHKI 310
Query: 173 FDEMSD---RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
F+++ R+ V W AMIS Y RVGD+ +A LFD MP RD +WNS+IAG TQNG
Sbjct: 311 FEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESF 370
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
AI F M + D+ +P++VT+V SA GH G L LG + N + + + N
Sbjct: 371 KAIKLFEEM-ISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYN 429
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
+LI+MY +CGS+++A F + + L S+N++I+ FA HG SI + +M ++
Sbjct: 430 SLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKM---KEDG 486
Query: 350 IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEA 409
I PD +T+I++L AC+H GL+++G+ F+ + P ++HY C++D+LGRAGR EEA
Sbjct: 487 IEPDRITYIAILTACSHAGLLDEGQRLFESIKF-----PDVDHYACMIDMLGRAGRLEEA 541
Query: 410 LEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGEL 469
+++++ M +EP ++GSLLN I+ + + E A KL +++P+N G +L+NIY
Sbjct: 542 MKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASA 601
Query: 470 GKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
G+W E KVR ++ + KT G SW+E
Sbjct: 602 GRWKEGDKVRDTMRKQGVKKTTGLSWLE 629
>gi|357455473|ref|XP_003598017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487065|gb|AES68268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 166/491 (33%), Positives = 272/491 (55%), Gaps = 44/491 (8%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
Q ++ + C+ +NHLKQ+ + + G + + K++ FC + N+ YA +FD +
Sbjct: 13 QTLMNLFNHCSTLNHLKQIHARIFLTGFNHNLILSGKIIMFCAVS-QNMNYALNVFDKIP 71
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
P+++L+ MI + + H+ +A ++ M + +P+ F + +LK +
Sbjct: 72 KPDSFLWNTMIRGFGNSTTHSHNAIHFFKRM--QLAHRPDNFTFSFILKIIARLRFVNLG 129
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
K +H + K GFE + V +L++ Y DI IA +LF+EM N+VSW ++I +
Sbjct: 130 KQLHCSLFKFGFENHTYVRNSLIHMYGML-KDIEIAHQLFEEMYQPNLVSWNSIIDCHVY 188
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
G A LF M + + GME ++P+ TL
Sbjct: 189 CGKYNEAIDLFTKMVQQ-------------------------QHNGME----LQPDHATL 219
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSF-----ISNALIDMYGKCGSLKEARRAF 308
V LSA G G L G+ +H +V R+G ++SF + NAL+DMY KCG+++EA F
Sbjct: 220 VVTLSACGAIGSLDFGRKVHSFV-RDG--VNSFGESISVFNALVDMYAKCGAVEEAYETF 276
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
+K + SWN MI FA HG E ++ +F M+ ++ RPD +TF+ +L AC+HGG
Sbjct: 277 SNMKRKNVVSWNVMILGFASHGNGEEALALFTRML--HENVERPDEITFLCVLCACSHGG 334
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
LV++GR YF++M + Y I+P I+HYGC+VDLLGRAG F EA E++K M +E + ++W +L
Sbjct: 335 LVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIKSMPVECNAIIWRTL 394
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L C+ YG + E K L+E++P++ ++LAN+Y G+W+E+ K R+ +++R
Sbjct: 395 LAACRNYGNVELGEKVRKHLMELEPDHSSDYVLLANMYASTGQWNEMSKERRSMQERRVR 454
Query: 489 K-TPGCSWIEV 498
K PG S+I +
Sbjct: 455 KPEPGNSFIGI 465
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 165/448 (36%), Positives = 257/448 (57%), Gaps = 23/448 (5%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K NL AR FD + + + AM++ YA Q L+ DM+ G QP++ +
Sbjct: 140 KKGNLKTARMYFDKMPERSVVSWNAMLSGYA-QGGAPEETIRLFNDMLSPGNVQPDETTW 198
Query: 118 PHVLKSCPDVLESRGTKMVHTQIV-----KSGFEQYPVVETALVNSYSRSGNDIGIARKL 172
V+ SC S G + IV K GF V+TAL++ +++ GN + A K+
Sbjct: 199 ATVISSC----SSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGN-LEAAHKI 253
Query: 173 FDEMSD---RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
F+++ R+ V W AMIS Y RVGD+ +A LFD MP RD +WNS+IAG TQNG
Sbjct: 254 FEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESF 313
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
AI F M + D+ +P++VT+V SA GH G L LG + N + + + N
Sbjct: 314 KAIKLFEEM-ISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYN 372
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
+LI+MY +CGS+++A F + + L S+N++I+ FA HG SI + +M ++
Sbjct: 373 SLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKM---KEDG 429
Query: 350 IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEA 409
I PD +T+I++L AC+H GL+++G+ F+ + P ++HY C++D+LGRAGR EEA
Sbjct: 430 IEPDRITYIAILTACSHAGLLDEGQRLFESIKF-----PDVDHYACMIDMLGRAGRLEEA 484
Query: 410 LEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGEL 469
+++++ M +EP ++GSLLN I+ + + E A KL +++P+N G +L+NIY
Sbjct: 485 MKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASA 544
Query: 470 GKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
G+W E KVR ++ + KT G SW+E
Sbjct: 545 GRWKEGDKVRDTMRKQGVKKTTGLSWLE 572
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 160/483 (33%), Positives = 276/483 (57%), Gaps = 13/483 (2%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
+ +++L +L HL Q+ + G Q+N + C + + YA +F
Sbjct: 8 IERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCA-SFNRIAYADRLFSQ 66
Query: 72 LTTPNTYLYTAMITAYA-SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
PN +L+ ++I A++ S P H S L+ M + + P+Q+ + +LKSC ++ E
Sbjct: 67 SHNPNIFLFNSIIKAHSLSVPFHQS--LLLFSSM-KNHRIVPDQYTFAPLLKSCANLCEY 123
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
+ V +++ + GF + + +V Y + A K+FDEMS R+VV W MI G
Sbjct: 124 SLGQCVISEVFRRGFYCFGSIRIGVVELYV-CCEKMEDAWKMFDEMSHRDVVVWNLMIRG 182
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
+ + G++ LF M +R + +WN++I+ QN +A+ F++M +P++
Sbjct: 183 FCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQME---EHGFKPDE 239
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNG-LDLDSFISNALIDMYGKCGSLKEARRAFD 309
VT+V L G L++G+ IH Y G L + + N+LID Y KCG++++A F
Sbjct: 240 VTVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQ 299
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
+ + K + SWN++I FAL+G+ E +I +F EM + ++P+ TF+++L AC H GL
Sbjct: 300 KMTCKSVVSWNTIILGFALNGKGEFAIDLFMEM---RKEYLKPNDATFVAVLTACVHSGL 356
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
+E+GR F M + Y I+P++EH+GC+VDLLGR G EEA +++K M ++P+ +WG++L
Sbjct: 357 LEKGRELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVL 416
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
C+ +G AE AVK+LI ++P N G ++L+N+ E G+W+EV VR+ +++++ K
Sbjct: 417 GACRTHGNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKK 476
Query: 490 TPG 492
PG
Sbjct: 477 APG 479
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 165/502 (32%), Positives = 283/502 (56%), Gaps = 16/502 (3%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
KQ+ S + G + F L+ F K+++L A IFD + +T Y +I+AY S
Sbjct: 116 KQVHSLVIRYGFHSSVFCQNALINFYA-KINDLGSAELIFDGILVKDTIAYNCLISAY-S 173
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
+ +A L+ M R N I + + ++ ++ E
Sbjct: 174 RSGEVLAARELFDKMRDRSIVSWNAMISCYAQNG-----DYHKGWIIFQRMQDEMCEPNE 228
Query: 150 VVETALVNSYSRSGN-DIGIARKLFDEMSD--RNVVSWTAMISGYTRVGDIKNAASLFDS 206
+ +++ ++ G+ ++G+ K ++ + N++ TAM+ Y + G + + +FD
Sbjct: 229 ITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDH 288
Query: 207 MPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGML 266
M RDV W+++IAG QNG ++A+ F M S I+PN VTLV LSA G +
Sbjct: 289 MARRDVVTWSAMIAGYAQNGRSNEALELFENMK---SAQIKPNDVTLVSVLSACAQLGSV 345
Query: 267 QLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSF 326
+ G+ I YV GL + ++++AL+ MY KCG++ +AR+ FD+ ++ +WNSMI
Sbjct: 346 ETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGL 405
Query: 327 ALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRI 386
A++G +E++I ++ M ++ ++P+ +TF+ L+ ACTH G VE G +F+ M + I
Sbjct: 406 AINGFAEDAIALYNRM---KEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNI 462
Query: 387 EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
P IEH+ C+VDL R+GR +A E + M++EP+ V+WG+LL+ +I+ + AE A K
Sbjct: 463 SPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGK 522
Query: 447 KLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFH 506
KL+E++P+N G ++L+NIY G+W E KVRK++KD+ K SW+EV+ +VH+F
Sbjct: 523 KLLELEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFL 582
Query: 507 SLDKTHPRTEEIYDALESMVAL 528
D +HPR++E+Y ++ + L
Sbjct: 583 VGDTSHPRSDEVYSTIDGLALL 604
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 149/515 (28%), Positives = 251/515 (48%), Gaps = 59/515 (11%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMIT 85
IN LKQ+Q+ + S T + +L L S + YAR +FD + P+ ++ + IT
Sbjct: 15 INQLKQIQALIIIKYLSLTPLFIRRL-----LNASFIQYARQVFDQIPHPDQGVHCSFIT 69
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
AY S+ + + A + M + + F P + KSC +L K VH+ +++ GF
Sbjct: 70 AY-SRLSLNNEALRTFVSM-HQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGF 127
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
+ AL+N Y++ ND+G A +FD + ++ +++ +IS Y+R G++ A LFD
Sbjct: 128 HSSVFCQNALINFYAKI-NDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFD 186
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
M DR + +WN++I+ QNG + F+RM E+ + PN++TL LS G
Sbjct: 187 KMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCE---PNEITLATVLSICAKLGD 243
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L++G I L + +S A+++MY KCG++ + R FD +++ + +W++MI
Sbjct: 244 LEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAG 303
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
+A +G+S ++ +FE M Q I+P+ VT +S+L+AC G VE G R
Sbjct: 304 YAQNGRSNEALELFENMKSAQ---IKPNDVTLVSVLSACAQLGSVETGE----------R 350
Query: 386 IEPQIEHYGCLVDLL---GRAGRFEEALEVVKGMKI-----EPDEVVWGSLLNGCKIYGR 437
I +E G + ++ G + + ++K +I + D V W S++ G I G
Sbjct: 351 IGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAING- 409
Query: 438 TDFAEFAVK-----KLIEIDPNNGGY-GIMLANIYG---ELGKWDEVRKVRKMLKDRNAY 488
FAE A+ K IE+ PNN + G+M A + ELG + R M D N
Sbjct: 410 --FAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELG----LEFFRSMRSDHN-- 461
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
+ + F + R+ + DA E
Sbjct: 462 ---------ISPNIEHFACIVDLFCRSGRLIDAYE 487
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 167/466 (35%), Positives = 261/466 (56%), Gaps = 45/466 (9%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
LS L AR +FD N +++ AM+ A A H A + DM R G P + + Y
Sbjct: 297 LSALPAARQVFDEAPVKNIFVWNAMLKALALAD-HGEEALTCLADMGRLGVPV-DSYSYA 354
Query: 119 HVLKSC-----PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLF 173
H LK+C + S + +H ++ G+ + V T L++ Y++ G
Sbjct: 355 HGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLG---------- 404
Query: 174 DEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
+VS+ A +F SMPDR++ +W+++I +N DAI
Sbjct: 405 -------IVSY---------------AERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQ 442
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
F+ M M ++ PN +T+V L A L GKV+H Y+ R G DL + NAL+
Sbjct: 443 IFQEM-MASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMA 501
Query: 294 MYGKCGSLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
MY KCG L+ R F+ ++R + SWNS+I+ + +HG S+ VFEEM+ + I P
Sbjct: 502 MYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMI---EEGISP 558
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
+ +TF+S+L AC+H GLVEQG+ F+ M + Y + P+ EHY C+VDLLGRAGR +EA+E+
Sbjct: 559 NIITFVSVLGACSHVGLVEQGKKLFESMVE-YNVTPRAEHYACMVDLLGRAGRLDEAVEL 617
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKW 472
++ M+I+P VWGSLL C+I+G ++AE A L +++P N G ++LA+IY
Sbjct: 618 IQSMRIQPSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQ 677
Query: 473 DEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
++V ++++L++ K PGCSWIEV K+++ F S+D +P+ EE+
Sbjct: 678 NQVDVLKELLEEHALEKVPGCSWIEVKKKLYSFVSVDNKNPQVEEL 723
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 139/330 (42%), Gaps = 42/330 (12%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR---RMGME 241
T +I Y + + A +FD P +++ WN+++ +A++ R+G+
Sbjct: 288 TRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRLGVP 347
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
V D+ C ++ H + +H + R G L + ++ LID Y K G +
Sbjct: 348 V-DSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIV 406
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
A R F + L SW++MI +A + + ++I +F+EMM D ++ P+ +T +S+L
Sbjct: 407 SYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMM-ASDADLVPNSITIVSVL 465
Query: 362 NACTHGGLVEQG---------RAYFKLMTKTYRIEPQIEHYGC----------------- 395
+AC + QG R + L++ + GC
Sbjct: 466 HACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNV 525
Query: 396 -----LVDLLGRAGRFEEALEVVKGM---KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKK 447
L+ G G E+L+V + M I P+ + + S+L C G + + +
Sbjct: 526 VSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFES 585
Query: 448 LIE--IDPNNGGYGIMLANIYGELGKWDEV 475
++E + P Y M+ ++ G G+ DE
Sbjct: 586 MVEYNVTPRAEHYACMV-DLLGRAGRLDEA 614
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 115/282 (40%), Gaps = 39/282 (13%)
Query: 55 CTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRR-GQPQPN 113
C KL ++YA +F + N ++AMI YA A ++++M+ PN
Sbjct: 399 CYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKN-ERPGDAIQIFQEMMASDADLVPN 457
Query: 114 QFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLF 173
VL +C V K++H I++ GF+ V AL+ Y + G + R +F
Sbjct: 458 SITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGC-LETGRYIF 516
Query: 174 DEMS-DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAI 232
+ + RNVVSW ++ISGY G + + +F+ M
Sbjct: 517 NWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEM------------------------- 551
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALI 292
+ + I PN +T V L A H G+++ GK + + + + ++
Sbjct: 552 ---------IEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMVEYNVTPRAEHYACMV 602
Query: 293 DMYGKCGSLKEARRAFDR-NSKKRLTSWNSMINSFALHGQSE 333
D+ G+ G L EA + W S++ + +HG E
Sbjct: 603 DLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHVE 644
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 284 DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
D F+S LI+ Y +L AR+ FD K + WN+M+ + AL E ++ +M
Sbjct: 283 DPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMG 342
Query: 344 RCQDHNIRPDGVTFISLLNAC 364
R + D ++ L AC
Sbjct: 343 RL---GVPVDSYSYAHGLKAC 360
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 217/339 (64%), Gaps = 6/339 (1%)
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
+V A++ Y + D+ +A +FD MP ++V WN++I+G G + +A+ FR M
Sbjct: 247 DVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQ 306
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
++P++VTLV L++ + G+L++GK +H Y+ RN + D F+ NAL+DMY KCG
Sbjct: 307 ---DKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCG 363
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
S+ EA R F+ ++ + S+ +MI ALHG++ + VF EM R I P+ VTF+
Sbjct: 364 SIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRV---GIEPNEVTFLG 420
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
LL AC+HGGLV +G+ YF M+ Y++ PQ EHYGC++DLLGRAG +EA E++ M+I
Sbjct: 421 LLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIR 480
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVR 479
PD G+LL C+I+G D E ++KL E+DP+ G I++ N+Y + +W + K+R
Sbjct: 481 PDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIR 540
Query: 480 KMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
K +K++ KTPGCS IEVD VH+F DK+HPR++ I
Sbjct: 541 KTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVI 579
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 210/461 (45%), Gaps = 54/461 (11%)
Query: 20 LERCNHINHLKQLQSF-LTTLGQSQTNFYA-FKLVRFCTLKLSNLTYARFIF---DHLTT 74
L C I+HLKQ+ + T S N + + +L Y R I H
Sbjct: 13 LNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSPDLFYIRSILLTHSHDAQ 72
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
L A+I + + + S +M+ G +P+ F P VLK+ + R +
Sbjct: 73 FCLSLCNAIIRSISRNSINLSP-MEFLNEMLVVGL-EPDGFTIPLVLKALALIQGIREGQ 130
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H + +K+G M NV ++ Y+
Sbjct: 131 QIHARSIKTG-------------------------------MVGFNVYVSNTLMRLYSVC 159
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD-NIRPNQVTL 253
G I + +FD P RD+ +W ++I T+ GL+S A+ F ME+ D +R + TL
Sbjct: 160 GSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVEAF----MEMCDLRLRADGRTL 215
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDL--DSFISNALIDMYGKCGSLKEARRAFDRN 311
V LSA + G L LG+ +H Y+ R+ +D+ D F+ NAL+DMY KC L A + FD
Sbjct: 216 VVVLSACSNLGDLNLGQKVHSYI-RHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEM 274
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K + +WN+MI+ A G+ ++ F M QD ++PD VT + +LN+C + G++E
Sbjct: 275 PVKNVVTWNAMISGLAYQGRYREALDTFRMM---QDKGVKPDEVTLVGVLNSCANLGVLE 331
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
G+ M + + + + L+D+ + G +EA V + MK D + +++ G
Sbjct: 332 IGKWVHAYMRRNHILADKFVG-NALLDMYAKCGSIDEAFRVFESMK-RRDVYSYTAMIFG 389
Query: 432 CKIYGRTD--FAEFAVKKLIEIDPNNGGY-GIMLANIYGEL 469
++G + F F+ + I+PN + G+++A +G L
Sbjct: 390 LALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGL 430
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 168/412 (40%), Gaps = 88/412 (21%)
Query: 14 QQVLAILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFD 70
+ ++ +L C+++ L +++ S++ + + + + LK +L A +FD
Sbjct: 213 RTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFD 272
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ N + AMI+ A Q + A +R M +G +P++ VL SC ++
Sbjct: 273 EMPVKNVVTWNAMISGLAYQGRY-REALDTFRMMQDKG-VKPDEVTLVGVLNSCANLGVL 330
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
K VH + ++ V AL++ Y++ G+ I A ++F+ M R+V S+TAMI G
Sbjct: 331 EIGKWVHAYMRRNHILADKFVGNALLDMYAKCGS-IDEAFRVFESMKRRDVYSYTAMIFG 389
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
G+ A +F M R+G+E PN+
Sbjct: 390 LALHGEANWAFQVFSEM----------------------------FRVGIE------PNE 415
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVY----RNGLDLDSFISNALIDMYGKCGSLKEARR 306
VT + L A H G++ GK Y + + L + +ID+ G+ G +KEA
Sbjct: 416 VTFLGLLMACSHGGLVAEGK---KYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEA-- 470
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
EE++ IRPD +LL AC
Sbjct: 471 ---------------------------------EEII--HKMEIRPDVFACGALLGACRI 495
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIE-HYGCLVDLLGRAGRFEEALEVVKGMK 417
G V+ G + +M K ++P E Y + +L R+++AL++ K MK
Sbjct: 496 HGNVDIGES---VMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMK 544
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 174/512 (33%), Positives = 283/512 (55%), Gaps = 47/512 (9%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTPNT 77
+L++C+ + +KQLQ+ L G + KL+ C + +L+YA IF ++ P+T
Sbjct: 7 LLQKCSSFSQIKQLQANLIINGDFHFSSSRTKLLELCAISSFGDLSYALHIFRYIPYPST 66
Query: 78 YLYTAMI--TAYASQPAHASSAFSLYRDMV-RRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
+ A+I TA +S PA+A YR M G + + LK+C L
Sbjct: 67 NDWNAVIRGTALSSDPANA---VFWYRAMAASNGLHRIDALTCSFALKACARALARSEAI 123
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H+Q+++ GF +++T L+++Y++ +
Sbjct: 124 QLHSQLLRFGFNADVLLQTTLLDAYAK--------------------------------I 151
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
GD+ A LFD MP D+ +WN++IAG Q +DAI F+RM +V N+RPN VT+
Sbjct: 152 GDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRM--KVDGNLRPNAVTVQ 209
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR-NSK 313
AL A G L+ G+ +H Y+ LD + + N +IDMY KCGS+ +A F+
Sbjct: 210 GALLACSQLGALKEGESVHKYIVEEKLDSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCD 269
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K L +WN+MI +FA+HG ++ +FE++ R + PD V+++++L AC H GLVE G
Sbjct: 270 KSLITWNTMIMAFAMHGDGHKALDLFEKLGR---SGMSPDAVSYLAVLCACNHAGLVEDG 326
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
F MT+ +EP I+HYG +VDLLGRAGR +EA ++V + P+ V+W +LL C+
Sbjct: 327 LKLFNSMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLWQTLLGACR 384
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
YG + AE A +KL+E+ + G ++L+N+Y +WD+V +VR ++ R+ KTPG
Sbjct: 385 TYGDVEMAELASRKLVEMGFISCGXFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGF 444
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
S+IE+ ++++F + D++H EIY L+ +
Sbjct: 445 SYIEIKGKMYKFVNGDQSHSSCREIYAKLDEI 476
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 168/475 (35%), Positives = 269/475 (56%), Gaps = 25/475 (5%)
Query: 64 YARFIFDHLTTPNTYLYTAMIT-AYASQPAHASSAFSLYRDMVR-RGQPQPN-QFIYPHV 120
YA +F ++ P+ +L A++ A+ +QP F ++ + R G P F + +
Sbjct: 90 YALNVFSAVSPPDPFLAAALLRFAFLTQPPLLP--FRVFSHLRRAHGAELPFLPFAFSTL 147
Query: 121 LKSCPDVLESRG----TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
KS SR ++ GF+++ VE +L+ +Y G D+G ARK+FDEM
Sbjct: 148 AKSAT---ASRSLPAAAAAHAVSVLVGGFDRHRFVENSLIGAYVACG-DVGAARKVFDEM 203
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+++V+SWT+++ YTR GD+++A +F P +D+ AW +++ G QN + A+ F
Sbjct: 204 VEKDVISWTSIVVAYTRSGDMRSAEEVFGRCPVKDMVAWTAMVTGYAQNAMPVKALEVFD 263
Query: 237 RM---GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
RM GM + ++V+L A+SA G L+ + R G + + + L+D
Sbjct: 264 RMAELGMVI------DEVSLTGAISACAQLGALRRAAWVQEIAERTGFGNNVVVGSGLVD 317
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
MY KCG + EA + F +K + +++SMI A HG++ +I +F+EM+ N+ P+
Sbjct: 318 MYAKCGLIDEASKVFYGMQEKNVYTYSSMIAGLASHGRASEAIALFKEMV--NRANVEPN 375
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
VTFI +L AC+H G+V +GR YF M Y I P +HY C+VDLLGRAG +EAL++V
Sbjct: 376 HVTFIGVLTACSHAGMVGEGRYYFAQMKDKYGIMPSADHYACMVDLLGRAGLVDEALDLV 435
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
+ M + P VWG+LL C+I+G+++ A+ + L +++P + G ++L+NI GKW+
Sbjct: 436 RSMSVTPHGGVWGALLGACRIHGKSEIAKVVAEHLFKLEPESIGNYVLLSNILASAGKWE 495
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIE-VDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
EV KVR +++ + K P S E D VHQF + D HPRT EI AL +VA
Sbjct: 496 EVSKVRILMRKQRLKKDPAVSLFEGRDGLVHQFFAGDNAHPRTHEIKKALLELVA 550
>gi|413924746|gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays]
Length = 655
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 161/454 (35%), Positives = 268/454 (59%), Gaps = 9/454 (1%)
Query: 66 RFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
R +FD + + + M+ +Y Q + A L+ M G P+Q I VL +C
Sbjct: 205 RKVFDGMAVRDVVSWGVMLDSYC-QTRNYKEALLLFAKMKNSGV-VPDQLILATVLPACG 262
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
+ R K +H+ ++ S + +AL++ Y+ N + +A KL++EM +++VS T
Sbjct: 263 HIRHLRIGKAIHSYMLVSDMIIGAHISSALISLYASCAN-MEMAEKLYNEMPRKDLVSST 321
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
AM+SGY R ++ A S+FD MP++DV +W+++I+G + ++A+S F GM+
Sbjct: 322 AMVSGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEALSLFN--GMQEC-G 378
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
IR +++T++ +SA + G L K IH ++ +GL+ I NALIDM+ KCG + A
Sbjct: 379 IRSDEITMLSVISACANLGSLDKAKWIHAFIKNSGLNKVLHICNALIDMFAKCGGINLAL 438
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
F+ K + +W SMI++FA+HG ++S+ +FE+M +D P+ VTF+SLL AC
Sbjct: 439 NVFNEMPLKNVITWTSMISAFAMHGDGKSSLRLFEQM---KDEGAEPNEVTFLSLLYACC 495
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
H GLV +GR F M + Y IEP+ EHYGC+VDLLGRA +EA+ +++ M +EP+ +W
Sbjct: 496 HAGLVHEGRLLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVSLIESMHLEPNVPIW 555
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
GSLL C ++G FA KK++++DPN+ G ++L IY + + ++VR ++K
Sbjct: 556 GSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASVLLLKIYMKSDNLNNAQEVRGVMKLH 615
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
K G SW+E+++ H+F + + HP + +I+
Sbjct: 616 RVSKETGLSWMELNEPFHEFAAGGEKHPESGKIF 649
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 129/283 (45%), Gaps = 39/283 (13%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
TA+ Y G +++ +FD M RDV +W ++ Q + +A+ F +M +
Sbjct: 189 TALAGAYAACGCVRDTRKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLLFAKMK---NS 245
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE- 303
+ P+Q+ L L A GH L++GK IH Y+ + + + + IS+ALI +Y C +++
Sbjct: 246 GVVPDQLILATVLPACGHIRHLRIGKAIHSYMLVSDMIIGAHISSALISLYASCANMEMA 305
Query: 304 ------------------------------ARRAFDRNSKKRLTSWNSMINSFALHGQSE 333
AR FD +K + SW++MI+ + Q
Sbjct: 306 EKLYNEMPRKDLVSSTAMVSGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPN 365
Query: 334 NSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
++ +F M C IR D +T +S+++AC + G +++ + + K + +
Sbjct: 366 EALSLFNGMQEC---GIRSDEITMLSVISACANLGSLDKAK-WIHAFIKNSGLNKVLHIC 421
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
L+D+ + G AL V M ++ + + W S+++ ++G
Sbjct: 422 NALIDMFAKCGGINLALNVFNEMPLK-NVITWTSMISAFAMHG 463
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 124/270 (45%), Gaps = 43/270 (15%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAY--ASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
AR IFD + + ++AMI+ Y ++QP + A SL+ M G + ++ V+
Sbjct: 336 ARSIFDGMPEKDVVSWSAMISGYVDSNQP---NEALSLFNGMQECG-IRSDEITMLSVIS 391
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
+C ++ K +H I SG + + AL++ +++ G I +A +F+EM +NV+
Sbjct: 392 ACANLGSLDKAKWIHAFIKNSGLNKVLHICNALIDMFAKCGG-INLALNVFNEMPLKNVI 450
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
+WT+MIS + GD K++ LF+ M D
Sbjct: 451 TWTSMISAFAMHGDGKSSLRLFEQMKD--------------------------------- 477
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVI-HGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+ PN+VT + L A H G++ G+++ V + G++ ++D+ G+ +
Sbjct: 478 -EGAEPNEVTFLSLLYACCHAGLVHEGRLLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLM 536
Query: 302 KEARRAFDR-NSKKRLTSWNSMINSFALHG 330
+EA + + + + W S++ + +HG
Sbjct: 537 QEAVSLIESMHLEPNVPIWGSLLAACWMHG 566
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 273 HGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQS 332
H R G D F+ AL Y CG +++ R+ FD + + + SW M++S+
Sbjct: 173 HALAVRTGALDDGFVGTALAGAYAACGCVRDTRKVFDGMAVRDVVSWGVMLDSYCQTRNY 232
Query: 333 ENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
+ ++ +F +M ++ + PD + ++L AC H + G+A M
Sbjct: 233 KEALLLFAKM---KNSGVVPDQLILATVLPACGHIRHLRIGKAIHSYM 277
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 174/505 (34%), Positives = 262/505 (51%), Gaps = 53/505 (10%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD L + + +MI+ Y S +Y+ M+ G I VL C +
Sbjct: 207 LFDKLCDRDVISWNSMISGYVSN-GLTERGLGIYKQMMYLGIDVDLATIIS-VLVGCANS 264
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
K VH+ +KS FE+ L++ YS+ G D+ A ++F++M +RNVVSWT+M
Sbjct: 265 GTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG-DLDGALRVFEKMGERNVVSWTSM 323
Query: 188 ISGYTRVGDIKNAASLFDSMPDR----DVPAWNSVIAGCTQNGLFSDA------------ 231
I+GYTR G A L M DV A S++ C ++G +
Sbjct: 324 IAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 383
Query: 232 ----------ISFFRRMG-MEVSDNI-------------------RPNQVTLVCALSAIG 261
+ + + G ME ++++ +P+ T+ C L A
Sbjct: 384 ESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACA 443
Query: 262 HTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNS 321
L+ GK IHGY+ RNG D ++NAL+D+Y KCG L AR FD K L SW
Sbjct: 444 SLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTV 503
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
MI + +HG +I F EM +D I PD V+FIS+L AC+H GL+EQG +F +M
Sbjct: 504 MIAGYGMHGYGNEAIATFNEM---RDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMK 560
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+ IEP++EHY C+VDLL R G +A E ++ + I PD +WG+LL GC+ Y + A
Sbjct: 561 NDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELA 620
Query: 442 EFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQ 501
E +++ E++P N GY ++LANIY E KW+EV+++R+ + + K PGCSWIE+ +
Sbjct: 621 EKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGK 680
Query: 502 VHQFHSL-DKTHPRTEEIYDALESM 525
V+ F S + +HP ++ I L+ M
Sbjct: 681 VNLFVSGNNSSHPHSKNIESLLKKM 705
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 164/345 (47%), Gaps = 35/345 (10%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
Y VL+ C + K VH+ I + + LV+ Y+ G D+ R++FD M
Sbjct: 102 YGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCG-DLKEGRRVFDTM 160
Query: 177 SDRNVVSWTAMISGYTRVGDIK--------------------NAASLFDSMPDRDVPAWN 216
+NV W M+S Y ++GD K +A LFD + DRDV +WN
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWN 220
Query: 217 SVIAGCTQNGLFSDAISFFRRM---GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH 273
S+I+G NGL + +++M G++V + T++ L ++G L LGK +H
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDV------DLATIISVLVGCANSGTLSLGKAVH 274
Query: 274 GYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSE 333
++ + SN L+DMY KCG L A R F++ ++ + SW SMI + G+S+
Sbjct: 275 SLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSD 334
Query: 334 NSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
+I + ++M + ++ D V S+L+AC G ++ G+ + K +E +
Sbjct: 335 GAIKLLQQM---EKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI-KANNMESNLFVC 390
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
L+D+ + G E A V M ++ D + W +++ K RT
Sbjct: 391 NALMDMYAKCGSMEAANSVFSTMVVK-DIISWNTMIGELKPDSRT 434
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 113/314 (35%), Gaps = 90/314 (28%)
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLF--DSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
D V + A I + ++GD++NA L + + + SV+ C F+D
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELICMCQKSELETKTYGSVLQLCAGLKSFTD----- 117
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
GK +H + N + +D + L+ Y
Sbjct: 118 ---------------------------------GKKVHSIIKSNSVGVDGALGLKLVSFY 144
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP--- 352
CG LKE RR FD KK + WN M++ +A G + SIC+F+ M+ RP
Sbjct: 145 ATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESA 204
Query: 353 ---------------------------------------------DGVTFISLLNACTHG 367
D T IS+L C +
Sbjct: 205 FELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANS 264
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
G + G+A L K+ E +I L+D+ + G + AL V + M E + V W S
Sbjct: 265 GTLSLGKAVHSLAIKS-SFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTS 322
Query: 428 LLNGCKIYGRTDFA 441
++ G GR+D A
Sbjct: 323 MIAGYTRDGRSDGA 336
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 246/418 (58%), Gaps = 11/418 (2%)
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
P+Q VL S D +++H ++K G + V +A+++ Y +SG+ GI
Sbjct: 250 PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGII-S 308
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR----DVPAWNSVIAGCTQNGL 227
LF++ A I+G +R G + A +F+ ++ +V +W S+IAGC QNG
Sbjct: 309 LFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGK 368
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
+A+ FR M + ++PN VT+ L A G+ L G+ HG+ R L + +
Sbjct: 369 DIEALELFREMQVA---GVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHV 425
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
+ALIDMY KCG + ++ F+ K L WNS++N F++HG+++ + +FE +MR +
Sbjct: 426 GSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR- 484
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE 407
++PD ++F SLL+AC GL ++G YFK+M++ Y I+P++EHY C+V+LLGRAG+ +
Sbjct: 485 --LKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQ 542
Query: 408 EALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYG 467
EA +++K M EPD VWG+LLN C++ D AE A +KL ++P N G ++L+NIY
Sbjct: 543 EAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYA 602
Query: 468 ELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
G W EV +R ++ K PGCSWI+V +V+ + DK+HP+ ++I + ++ +
Sbjct: 603 AKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEI 660
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 214/466 (45%), Gaps = 53/466 (11%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A + + P Y ++++I A S ++ M G P+ + P++ K C
Sbjct: 69 ADLVLQSIPDPTIYSFSSLIYALTKAKLFTQS-IGVFSRMFSHGLI-PDSHVLPNLFKVC 126
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
++ + K +H SG + V+ ++ + Y R G +G ARK+FD MSD++VV+
Sbjct: 127 AELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGR-MGDARKVFDRMSDKDVVTC 185
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPA----WNSVIAGCTQNGLFSDAISFFRRMGM 240
+A++ Y R G ++ + M + A WN +++G ++G +A+ F+++
Sbjct: 186 SALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH- 244
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
P+QVT+ L ++G + ML +G++IHGYV + GL D + +A+IDMYGK G
Sbjct: 245 --HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGH 302
Query: 301 -------------------------------LKEARRAF----DRNSKKRLTSWNSMINS 325
+ +A F ++ + + SW S+I
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
A +G+ ++ +F EM Q ++P+ VT S+L AC + + GR+ + +
Sbjct: 363 CAQNGKDIEALELFREM---QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
++ + L+D+ + GR + ++V M + V W SL+NG ++G+
Sbjct: 420 LD-NVHVGSALIDMYAKCGRINLS-QIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 446 KKLI--EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
+ L+ + P+ + +L+ G++G DE K KM+ + K
Sbjct: 478 ESLMRTRLKPDFISFTSLLSAC-GQVGLTDEGWKYFKMMSEEYGIK 522
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 100/195 (51%), Gaps = 12/195 (6%)
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM---GMEVS 243
+I+ Y+ +A + S+PD + +++S+I T+ LF+ +I F RM G+
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
++ PN + LSA ++GK IH +GLD+D+F+ ++ MY +CG + +
Sbjct: 116 SHVLPNLFKVCAELSA------FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGD 169
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
AR+ FDR S K + + ++++ ++A G E + + EM + I + V++ +L+
Sbjct: 170 ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM---ESSGIEANIVSWNGILSG 226
Query: 364 CTHGGLVEQGRAYFK 378
G ++ F+
Sbjct: 227 FNRSGYHKEAVVMFQ 241
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/461 (33%), Positives = 258/461 (55%), Gaps = 40/461 (8%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +F+ + + +TAMI A + + A ++++DM + G +PN+ Y +L +C
Sbjct: 500 ARLLFNKMVRKDIISWTAMIGGLA-KSGLGAEALAVFQDMQQAG-LKPNRVTYTSILNAC 557
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ +H Q++++G V LVN YS G+
Sbjct: 558 SSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGS-------------------- 597
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+K+A +FD M RD+ A+N++I G + L +A+ F R+ E
Sbjct: 598 ------------VKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEE--- 642
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
++P++VT + L+A ++G L+ K IH V ++G D+ + NAL+ Y KCGS +A
Sbjct: 643 GLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDA 702
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
FD+ K+ + SWN++I A HG+ ++ + +FE M + I+PD VTF+SLL+AC
Sbjct: 703 LLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERM---KMEGIKPDIVTFVSLLSAC 759
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GL+E+GR YF M++ + I P IEHYGC+VDLLGRAG+ +E ++K M + + +
Sbjct: 760 SHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRI 819
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL C+I+G AE A + +++DP+N + L+++Y G WD K+RK+++
Sbjct: 820 WGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQ 879
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
R K PG SWIEV ++H F + D++HP +E+IY L+ +
Sbjct: 880 RGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKL 920
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 216/507 (42%), Gaps = 105/507 (20%)
Query: 25 HINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMI 84
H+ +K F + N YA K ++ AR +FD + T + +T +I
Sbjct: 267 HVEAMKARLLFDVNVANCILNMYA---------KCGSIHEAREVFDKMETKSVVSWTIII 317
Query: 85 TAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG 144
YA H+ AF +++ M + G PN+ Y +VL + + K VH+ I+ +G
Sbjct: 318 GGYAD-CGHSEIAFEIFQKMQQEGVV-PNRITYINVLNAFSGPAALKWGKTVHSHILNAG 375
Query: 145 FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLF 204
E V TALV Y++ G K+ +F
Sbjct: 376 HESDLAVGTALVKMYAK--------------------------------CGSYKDCRQVF 403
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
+ + +RD+ AWN++I G + G + +A + +M E + PN++T V L+A +
Sbjct: 404 EKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQRE---GMMPNKITYVILLNACVNPT 460
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
L G+ IH V ++G D + NALI MY +CGS+K+AR F++ +K + SW +MI
Sbjct: 461 ALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIG 520
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
A G ++ VF++M Q ++P+ VT+ S+LNAC+ ++ GR
Sbjct: 521 GLAKSGLGAEALAVFQDM---QQAGLKPNRVTYTSILNACSSPAALDWGR---------- 567
Query: 385 RIEPQIEHYG---------CLVDLLGRAGRFEEALEVVKGMK------------------ 417
RI Q+ G LV++ G ++A +V M
Sbjct: 568 RIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHN 627
Query: 418 ----------------IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDP--NNGGYG 459
++PD+V + ++LN C G ++A+ + L+ D ++ G
Sbjct: 628 LGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAK-EIHSLVLKDGYLSDTSLG 686
Query: 460 IMLANIYGELGKWDEVRKVRKMLKDRN 486
L + Y + G + + V + RN
Sbjct: 687 NALVSTYAKCGSFSDALLVFDKMMKRN 713
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 194/468 (41%), Gaps = 80/468 (17%)
Query: 57 LKLSNLTYARFIFDHL--TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQ 114
++ ++ AR +++ L T + + AM+ Y Q + A L R+M + G +
Sbjct: 187 IQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYV-QYGYIEEALKLLREMQQHGLA-LGR 244
Query: 115 FIYPHVLKSC--PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKL 172
+L SC P LE + +H + +K AR L
Sbjct: 245 ATTMRLLSSCKSPSALEC--GREIHVEAMK--------------------------ARLL 276
Query: 173 FDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAI 232
FD NV + +++ Y + G I A +FD M + V +W +I G G A
Sbjct: 277 FDV----NVAN--CILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAF 330
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALI 292
F++M E + PN++T + L+A L+ GK +H ++ G + D + AL+
Sbjct: 331 EIFQKMQQE---GVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALV 387
Query: 293 DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
MY KCGS K+ R+ F++ + L +WN+MI A G E + ++ +M R + P
Sbjct: 388 KMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQR---EGMMP 444
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTK------------------------------ 382
+ +T++ LLNAC + + GR + K
Sbjct: 445 NKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLF 504
Query: 383 TYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK---IEPDEVVWGSLLNGCKIYGRTD 439
+ I + ++ L ++G EAL V + M+ ++P+ V + S+LN C D
Sbjct: 505 NKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALD 564
Query: 440 FAEFAVKKLIEID-PNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+ +++IE + L N+Y G + R+V + R+
Sbjct: 565 WGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRD 612
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 130/288 (45%), Gaps = 53/288 (18%)
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR--NSKKRLTSWNSMI 323
L G+ +H ++ ++ LD + NALI+MY +CGS++EAR+ +++ ++++ + SWN+M+
Sbjct: 157 LVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMV 216
Query: 324 NSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT 383
+ +G E ++ + EM Q H + T + LL++C +E GR K
Sbjct: 217 VGYVQYGYIEEALKLLREM---QQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKA 273
Query: 384 YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV-WGSLLNGCKIYGRTDFAE 442
R+ + C++++ + G EA EV K+E VV W ++ G G ++ A
Sbjct: 274 -RLLFDVNVANCILNMYAKCGSIHEAREVFD--KMETKSVVSWTIIIGGYADCGHSEIAF 330
Query: 443 FAVKKLIE--IDPN----------------------------NGGY------GIMLANIY 466
+K+ + + PN N G+ G L +Y
Sbjct: 331 EIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMY 390
Query: 467 GELGKWDEVRKVRKMLKDRN--AYKT------PGCSWIEVDKQVHQFH 506
+ G + + R+V + L +R+ A+ T G +W E + HQ
Sbjct: 391 AKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQ 438
>gi|7671499|emb|CAB89340.1| putative protein [Arabidopsis thaliana]
Length = 514
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 181/491 (36%), Positives = 263/491 (53%), Gaps = 48/491 (9%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L YA +FD + P+ + ++ A Q SLY +M +RG P+++ + VL
Sbjct: 28 LKYAHKLFDEIPKPDVSICNHVLRGSA-QSMKPEKTVSLYTEMEKRGV-SPDRYTFTFVL 85
Query: 122 KSCPDVLESRGTKMV-HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
K+C LE R H ++V+ GF V+ AL+ ++ G D+GIA +LFD+ + +
Sbjct: 86 KACSK-LEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCG-DLGIASELFDDSAKAH 143
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC------------------ 222
V+W++M SGY + G I A LFD MP +D AWN +I GC
Sbjct: 144 KVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTE 203
Query: 223 ----TQNGLFS---------DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
T N + S +A+ F+ M P+ VT++ LSA G L+ G
Sbjct: 204 KDVVTWNAMISGYVNCGYPKEALGIFKEMR---DAGEHPDVVTILSLLSACAVLGDLETG 260
Query: 270 KVIHGYVYRNG-----LDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
K +H Y+ + + + I NALIDMY KCGS+ A F + L++WN++I
Sbjct: 261 KRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIV 320
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
ALH +E SI +FEEM R + + P+ VTFI ++ AC+H G V++GR YF LM Y
Sbjct: 321 GLALH-HAEGSIEMFEEMQRLK---VWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMY 376
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
IEP I+HYGC+VD+LGRAG+ EEA V+ MKIEP+ +VW +LL CKIYG + ++A
Sbjct: 377 NIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYA 436
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
+KL+ + + G ++L+NIY G+WD V+KVRKM D K G S IE D
Sbjct: 437 NEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLM 496
Query: 505 FHSLDKTHPRT 515
L + P +
Sbjct: 497 MRYLLSSEPES 507
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 155/374 (41%), Gaps = 71/374 (18%)
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
MS+ +VV + + G +K A LFD +P DV N V+ G Q+ +S +
Sbjct: 7 MSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLY 66
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
M + P++ T L A G HG V R+G L+ ++ NALI +
Sbjct: 67 TEMEKR---GVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFH 123
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM------------- 342
CG L A FD ++K +W+SM + +A G+ + ++ +F+EM
Sbjct: 124 ANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMIT 183
Query: 343 --MRCQ---------DHNIRPDGVTF---------------------------------- 357
++C+ D D VT+
Sbjct: 184 GCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVT 243
Query: 358 -ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQI----EHYGCLVDLLGRAGRFEEALEV 412
+SLL+AC G +E G+ + +T + I + L+D+ + G + A+EV
Sbjct: 244 ILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEV 303
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAE-FAVKKLIEIDPNNGGY-GIMLANIYGELG 470
+G+K + D W +L+ G ++ E F + +++ PN + G++LA + G
Sbjct: 304 FRGVK-DRDLSTWNTLIVGLALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHS--G 360
Query: 471 KWDEVRKVRKMLKD 484
+ DE RK +++D
Sbjct: 361 RVDEGRKYFSLMRD 374
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 128/320 (40%), Gaps = 73/320 (22%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
LK + AR +FD T + + AMI+ Y + + A ++++M G+ P+
Sbjct: 186 LKCKEMDSARELFDRFTEKDVVTWNAMISGYVN-CGYPKEALGIFKEMRDAGE-HPDVVT 243
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+L +C + + K +H I +ETA V+S G I
Sbjct: 244 ILSLLSACAVLGDLETGKRLHIYI----------LETASVSSSIYVGTPI---------- 283
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
W A+I Y + G I A +F + DRD+ WN++I G + +I F
Sbjct: 284 -------WNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHA-EGSIEMFE 335
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN--ALIDM 294
M + PN+VT + + A H+G + G+ + R+ +++ I + ++DM
Sbjct: 336 EMQ---RLKVWPNEVTFIGVILACSHSGRVDEGRKYFS-LMRDMYNIEPNIKHYGCMVDM 391
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
G+ G L+EA +F E M+ I P+
Sbjct: 392 LGRAGQLEEA--------------------------------FMFVESMK-----IEPNA 414
Query: 355 VTFISLLNACTHGGLVEQGR 374
+ + +LL AC G VE G+
Sbjct: 415 IVWRTLLGACKIYGNVELGK 434
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/466 (35%), Positives = 252/466 (54%), Gaps = 45/466 (9%)
Query: 67 FIFDHLTTP---NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
F D T P + +L+ +I A+A A Y M RR PN+F +P VLK+
Sbjct: 178 FPNDQTTPPPSHDAFLFNTLIRAFAQTTHSKPHALRFYNTM-RRHAVSPNKFTFPFVLKA 236
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSY---SRSGNDIGI-ARKLFDEMSDR 179
C ++ VH +VK GFE+ P V LV+ Y + G+ + A+K+FDE +
Sbjct: 237 CAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVK 296
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
+ V+W+AMI GY R G+ A +LF M V C
Sbjct: 297 DSVTWSAMIGGYARAGNSARAVTLFREM---------QVTGVC----------------- 330
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
P+++T+V LSA G L+LGK + Y+ R + + NALIDM+ KCG
Sbjct: 331 --------PDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCG 382
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
+ A + F + + SW SMI A+HG+ ++ VF+EMM + + PD V FI
Sbjct: 383 DVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMM---EQGVDPDDVAFIG 439
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
+L+AC+H GLV++G YF M + I P+IEHYGC+VD+L RAGR EALE V+ M +E
Sbjct: 440 VLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVE 499
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVR 479
P++V+W S++ C G E K+LI +P++ ++L+NIY +L +W++ KVR
Sbjct: 500 PNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKVR 559
Query: 480 KMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+M+ + K PG + IE++ ++++F + DK+H + +EIY+ +E M
Sbjct: 560 EMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEM 605
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 7/178 (3%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ +FD ++ ++AMI YA + +++ A +L+R+M G P++ VL +C
Sbjct: 286 AKKVFDESPVKDSVTWSAMIGGYA-RAGNSARAVTLFREMQVTGV-CPDEITMVSVLSAC 343
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
D+ K + + I + + + AL++ +++ G D+ A K+F EM R +VSW
Sbjct: 344 ADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCG-DVDRAVKVFREMKVRTIVSW 402
Query: 185 TAMISGYTRVGDIKNAASLFDSM----PDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
T+MI G G A +FD M D D A+ V++ C+ +GL +F M
Sbjct: 403 TSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTM 460
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/498 (33%), Positives = 273/498 (54%), Gaps = 44/498 (8%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQ------------------PAHASSAFSLYRDMVR 106
AR +FD ++ + +A++ AYA + A+ S + R
Sbjct: 170 ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR 229
Query: 107 RGQPQPNQFIYP--HVLKSCPD------VLESRGT-------KMVHTQIVKSGFEQYPVV 151
G + ++ H L CPD VL S G +++H ++K G + V
Sbjct: 230 SGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCV 289
Query: 152 ETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR- 210
+A+++ Y +SG+ GI LF++ A I+G +R G + A +F+ ++
Sbjct: 290 ISAMIDMYGKSGHVYGII-SLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQT 348
Query: 211 ---DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
+V +W S+IAGC QNG +A+ FR M + ++PN VT+ L A G+ L
Sbjct: 349 MELNVVSWTSIIAGCAQNGKDIEALELFREMQVA---GVKPNHVTIPSMLPACGNIAALG 405
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFA 327
G+ HG+ R L + + +ALIDMY KCG + ++ F+ K L WNS++N F+
Sbjct: 406 HGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFS 465
Query: 328 LHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIE 387
+HG+++ + +FE +MR + ++PD ++F SLL+AC GL ++G YFK+M++ Y I+
Sbjct: 466 MHGKAKEVMSIFESLMRTR---LKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIK 522
Query: 388 PQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKK 447
P++EHY C+V+LLGRAG+ +EA +++K M EPD VWG+LLN C++ D AE A +K
Sbjct: 523 PRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEK 582
Query: 448 LIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHS 507
L ++P N G ++L+NIY G W EV +R ++ K PGCSWI+V +V+ +
Sbjct: 583 LFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLA 642
Query: 508 LDKTHPRTEEIYDALESM 525
DK+HP+ ++I + ++ +
Sbjct: 643 GDKSHPQIDQITEKMDEI 660
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 214/466 (45%), Gaps = 53/466 (11%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A + + P Y ++++I A S ++ M G P+ + P++ K C
Sbjct: 69 ADLVLQSIPDPTIYSFSSLIYALTKAKLFTQS-IGVFSRMFSHGLI-PDSHVLPNLFKVC 126
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
++ + K +H SG + V+ ++ + Y R G +G ARK+FD MSD++VV+
Sbjct: 127 AELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGR-MGDARKVFDRMSDKDVVTC 185
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPA----WNSVIAGCTQNGLFSDAISFFRRMGM 240
+A++ Y R G ++ + M + A WN +++G ++G +A+ F+++
Sbjct: 186 SALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH- 244
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
P+QVT+ L ++G + ML +G++IHGYV + GL D + +A+IDMYGK G
Sbjct: 245 --HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGH 302
Query: 301 -------------------------------LKEARRAF----DRNSKKRLTSWNSMINS 325
+ +A F ++ + + SW S+I
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
A +G+ ++ +F EM Q ++P+ VT S+L AC + + GR+ + +
Sbjct: 363 CAQNGKDIEALELFREM---QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
++ + L+D+ + GR + ++V M + V W SL+NG ++G+
Sbjct: 420 LD-NVHVGSALIDMYAKCGRINLS-QIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 446 KKLI--EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
+ L+ + P+ + +L+ G++G DE K KM+ + K
Sbjct: 478 ESLMRTRLKPDFISFTSLLSAC-GQVGLTDEGWKYFKMMSEEYGIK 522
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 100/195 (51%), Gaps = 12/195 (6%)
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM---GMEVS 243
+I+ Y+ +A + S+PD + +++S+I T+ LF+ +I F RM G+
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
++ PN + LSA ++GK IH +GLD+D+F+ ++ MY +CG + +
Sbjct: 116 SHVLPNLFKVCAELSA------FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGD 169
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
AR+ FDR S K + + ++++ ++A G E + + EM + I + V++ +L+
Sbjct: 170 ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM---ESSGIEANIVSWNGILSG 226
Query: 364 CTHGGLVEQGRAYFK 378
G ++ F+
Sbjct: 227 FNRSGYHKEAVVMFQ 241
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 272/509 (53%), Gaps = 41/509 (8%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
++ + C + KQL T LG + + L+ + L AR +FD + +
Sbjct: 145 SLFKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYS-NCGCLVSARKVFDKMVNKSV 203
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+ MI AYA Q A L+R M +PN+ +VL +C + K VH
Sbjct: 204 VSWATMIGAYA-QWDLPHEAIKLFRRM-EIASVKPNEITLVNVLTACARSRDLETAKQVH 261
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
I ++G + V+ +AL++ Y + G Y D
Sbjct: 262 KYIDETGIGFHTVLTSALMDVYCKCG--------------------------CYPLARD- 294
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
LF+ MP++++ WN +I G ++ + +A+S F M + ++ ++VT+ L
Sbjct: 295 -----LFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQL---SGVKGDKVTMASLL 346
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
A H G L+LGK +H Y+ + +++D + AL+DMY KCGS++ A R F +K +
Sbjct: 347 IACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVM 406
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
+W ++I A+ GQ ++ +F EM Q ++PD +TF+ +L AC+H GLV +G AYF
Sbjct: 407 TWTALIVGLAMCGQGLKALELFHEM---QMSEVKPDAITFVGVLAACSHAGLVNEGIAYF 463
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
M Y I+P IEHYGC+VD+LGRAGR EA ++++ M + PD V LL+ C+I+G
Sbjct: 464 NSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGN 523
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
AE A ++LIE+DP NGG ++L+NIY + W+ +K+R+++ +RN K PGCS IE
Sbjct: 524 LVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIE 583
Query: 498 VDKQVHQFHSLDKTHPRTEEIYDALESMV 526
V VH+F D +HP++ EIY+ L+ M+
Sbjct: 584 VGGVVHEFVKGDVSHPQSSEIYETLDDMM 612
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/419 (30%), Positives = 209/419 (49%), Gaps = 46/419 (10%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHLTTPNTY 78
LE+C ++ LKQ+ + + F A K+V FC L S +L YAR +F+ + P T+
Sbjct: 47 LEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTF 106
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHT 138
++I Y ++ A Y+ M+ +G P++F +P + KSC + E K +H
Sbjct: 107 TCNSIIRGYTNKNL-PRQAILFYQLMMLQGL-DPDRFTFPSLFKSCGVLCEG---KQLHC 161
Query: 139 QIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIK 198
K GF ++ L+N YS G + ARK+FD+M +++VVSW MI Y +
Sbjct: 162 HSTKLGFASDAYIQNTLMNMYSNCGCLVS-ARKVFDKMVNKSVVSWATMIGAYAQ----- 215
Query: 199 NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
W+ L +AI FRR ME++ +++PN++TLV L+
Sbjct: 216 ----------------WD----------LPHEAIKLFRR--MEIA-SVKPNEITLVNVLT 246
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
A + L+ K +H Y+ G+ + +++AL+D+Y KCG AR F++ +K L
Sbjct: 247 ACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFC 306
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
WN MIN E ++ +F EM Q ++ D VT SLL ACTH G +E G+ +
Sbjct: 307 WNIMINGHVEDSDYEEALSLFNEM---QLSGVKGDKVTMASLLIACTHLGALELGK-WLH 362
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
+ + +IE + LVD+ + G E A+ V + M E D + W +L+ G + G+
Sbjct: 363 VYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMP-EKDVMTWTALIVGLAMCGQ 420
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/482 (35%), Positives = 264/482 (54%), Gaps = 10/482 (2%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L R N +N +Q+ + +T LG F + L+ NL YAR +FD +
Sbjct: 558 ILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYA-ACGNLCYARSVFDEMVVK 616
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ + ++I Y SQ +L++ M G + ++ V+ +C + +
Sbjct: 617 DVVSWNSLICGY-SQCNRFKDILALFKLMQNEG-VKADKVTMIKVVSACTRLGDYSMADY 674
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+ I E + LV+ + R G + A K+F M RN+V+ AMI+ Y +
Sbjct: 675 MVRYIEDYCIEVDVYLGNTLVDYFGRRGQ-LQSAEKVFFNMKVRNIVTMNAMIAAYAKGQ 733
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
DI +A +FD +P +D+ +W+S+I+G +Q FSDA+ FR+M ++P+ + +
Sbjct: 734 DIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQ---RAKVKPDAIVIAS 790
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
+S+ H G L LGK +H YV RN + D+ + N+LIDMY KCGS KEA + F +K
Sbjct: 791 VVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKD 850
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
SWNS+I A +G + S+ +F+ M+ RP+GVTF+ +L AC + LVE+G
Sbjct: 851 TLSWNSIIIGLANNGFEKESLNLFQAML---TEGFRPNGVTFLGVLIACANAKLVEEGLD 907
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
+F+ M + Y +EPQ++HYGC+VDLLGRAG+ E+AL + M I+PD VVW LL C +
Sbjct: 908 HFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTH 967
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
G AE KKL E++P+N G +L+N Y +W E VR+ + D + K+PGCS
Sbjct: 968 GDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSA 1027
Query: 496 IE 497
+E
Sbjct: 1028 VE 1029
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 155/435 (35%), Positives = 258/435 (59%), Gaps = 15/435 (3%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
L++ + A +FD TP + A++ AY+ P H A L+R R + +
Sbjct: 39 LQIHSQLIAHQVFDRRPTP----WHALLKAYSHGP-HPQDALQLFRHA--RWHAADDTYA 91
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ LK+C + R +H +V+ GFE V TALVN Y G + +R F+EM
Sbjct: 92 FTFALKACAGLGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGC-LADSRMAFEEM 150
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+N VSW +I+G+ G+++ A LF+ MP R+V +W+ +I G T+ +A++ FR
Sbjct: 151 PVKNAVSWNVVITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFR 210
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
RM +++ I P+++T++ + A+ + G + +G+ +HGY + GL D + N+LID+Y
Sbjct: 211 RM---MAEGISPSEITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYA 267
Query: 297 KCGSLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
K GS++ + R FD +R L SW S+I+ FA+HG S ++ +F +M R IRP+ +
Sbjct: 268 KIGSIQNSLRVFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRA---GIRPNRI 324
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF+S+L+AC+HGGLVEQG A+FK M Y I P ++H+GC++D+LGRAGR EA ++++
Sbjct: 325 TFLSVLHACSHGGLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRD 384
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
+E + VW +LL C YG + E +KK++ ++ GG ++L+N+ EL ++ +
Sbjct: 385 FPVEVNATVWRTLLGCCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDA 444
Query: 476 RKVRKMLKDRNAYKT 490
VRK++ RN+ K+
Sbjct: 445 EIVRKLVDQRNSVKS 459
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 202/411 (49%), Gaps = 27/411 (6%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYA 88
+K+L ++ G ++ K++R + +L +A +FD + P T+L+ +I A
Sbjct: 469 IKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLA 528
Query: 89 SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQY 148
A A A + Y+ + G P+ +P +LK+C + + +H I K G
Sbjct: 529 QSDAPA-DAIAFYKK-AQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLSD 586
Query: 149 PVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP 208
V +L++ Y+ GN + AR +FDEM ++VVSW ++I GY++ K+ +LF M
Sbjct: 587 IFVSNSLIHLYAACGN-LCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQ 645
Query: 209 DRDVPA----WNSVIAGCTQNGLFSDA---ISFFRRMGMEVSDNIRPNQVTLVCALSAIG 261
+ V A V++ CT+ G +S A + + +EV D N TLV G
Sbjct: 646 NEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEV-DVYLGN--TLV---DYFG 699
Query: 262 HTGMLQLG-KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
G LQ KV RN + + NA+I Y K + AR+ FD+ KK L SW+
Sbjct: 700 RRGQLQSAEKVFFNMKVRNIVTM-----NAMIAAYAKGQDIVSARKIFDQIPKKDLISWS 754
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
SMI+ ++ +++ +F +M R + ++PD + S++++C H G ++ G+ + +
Sbjct: 755 SMISGYSQANHFSDALEIFRQMQRAK---VKPDAIVIASVVSSCAHLGALDLGKWVHEYV 811
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ I+ L+D+ + G +EAL+V K MK E D + W S++ G
Sbjct: 812 RRN-NIKADTIMENSLIDMYMKCGSAKEALQVFKEMK-EKDTLSWNSIIIG 860
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/507 (33%), Positives = 282/507 (55%), Gaps = 49/507 (9%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
+ L + L +G ++ ++A KL+ F T + L+ AR +FD + N + + A A
Sbjct: 47 RALHAHLVIIGLARLTYFAAKLMSFYT-ECGQLSNARKLFDKIPNTNIRRWIVLTGACAR 105
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
+ + A S + +M + G +PNQF+ P +LK+C + + R + +HT I+K+ FE
Sbjct: 106 RGFY-EEALSAFSEMQKEGL-RPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDA 163
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDR------------------------------ 179
+ +AL+ YS+ G+ + A ++FD + D+
Sbjct: 164 YIISALIYMYSKCGH-VEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQ 222
Query: 180 -----NVVSWTAMISGYTRVGDIKNAASLFDSMP----DRDVPAWNSVIAGCTQNGLFSD 230
NVVSW +I+G+++VGD + +F M + DV +W SVI+G QN +
Sbjct: 223 AGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHE 282
Query: 231 AISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNA 290
F+ M + P+ VT+ L A + L+ GK IHGY G++ D ++ +A
Sbjct: 283 GFDAFKEM---LDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSA 339
Query: 291 LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
L+DMY KCG + EA+ F ++ +WNS+I +A HG +I +F +M ++ +
Sbjct: 340 LVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQM---EESDT 396
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
+ D +TF ++LNAC+H G+VE G + F+ M + YRIEP++EHY C+VDLLGRAG+ EA
Sbjct: 397 KLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAY 456
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELG 470
+++K M +EPD+ VWG+LL C+ +G + AE A + L E++P + G ++L+N+Y + G
Sbjct: 457 DLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAG 516
Query: 471 KWDEVRKVRKMLKDRNAYKTPGCSWIE 497
+W K++KM+K R K PGCSWIE
Sbjct: 517 RWGNAAKMKKMMKQRKFGKFPGCSWIE 543
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 114/264 (43%), Gaps = 18/264 (6%)
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L G+ +H ++ GL ++ + L+ Y +CG L AR+ FD+ + W + +
Sbjct: 43 LYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGA 102
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
A G E ++ F EM Q +RP+ S+L AC H G ++ K
Sbjct: 103 CARRGFYEEALSAFSEM---QKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKN-S 158
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
E L+ + + G E+A V + ++ D VV ++++G +G A V
Sbjct: 159 FESDAYIISALIYMYSKCGHVEKACRVFDWI-VDKDLVVMNAMVSGYAQHGFVHEALNLV 217
Query: 446 KKLIE--IDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV-DKQV 502
+K+ + + PN + ++A + ++G V +V +++ N + SW V V
Sbjct: 218 QKMQQAGVKPNVVSWNTLIAG-FSQVGDKSMVSEVFRLMT-ANGVEPDVVSWTSVISGFV 275
Query: 503 HQFHSLDKTHPRTEEIYDALESMV 526
FH+ E +DA + M+
Sbjct: 276 QNFHN--------HEGFDAFKEML 291
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/517 (31%), Positives = 278/517 (53%), Gaps = 42/517 (8%)
Query: 10 QTLNQQV-LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFI 68
Q LN + ++ L C ++ ++Q+ + + G + A KL+ F + + L A +
Sbjct: 58 QRLNPKFYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRA-LDDAYGL 116
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
FD + ++ ++ M+ +A + + F +R+++R G +P+ + P V+++C D+
Sbjct: 117 FDGMCVRDSVSWSVMVGGFAKVGDYIN-CFGTFRELIRCG-ARPDNYTLPFVIRACRDLK 174
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ +++H + K G + V ALV+ Y
Sbjct: 175 NLQMGRLIHHIVYKFGLDLDHFVCAALVDMY----------------------------- 205
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
+ +I++A LFD M +RD+ W +I G + G ++++ F +M E + P
Sbjct: 206 ---VKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREE---GVVP 259
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
++V +V + A G + ++I Y+ R LD + A+IDMY KCG ++ AR F
Sbjct: 260 DKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIF 319
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
DR +K + SW++MI ++ HGQ ++ +F M+ + PD +T SLL AC+H G
Sbjct: 320 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMML---SSGMLPDKITLASLLYACSHAG 376
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
LVE+G +F M + Y + ++HY C+VDLLGRAGR +EAL+++K M IE DE +WG+
Sbjct: 377 LVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAF 436
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L C+ + AE A L+E+ N G+ ++L+NIY G+W++V K+R ++ R
Sbjct: 437 LGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLK 496
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
KTPG +WIEVD + HQF D THPR++EIY+ L+S+
Sbjct: 497 KTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSL 533
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 159/502 (31%), Positives = 268/502 (53%), Gaps = 41/502 (8%)
Query: 24 NHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAM 83
++ ++Q+ + G Q A KLV F + + L A +FD + ++ ++ M
Sbjct: 749 TNLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRA-LDDAYGLFDGMCVRDSVSWSVM 807
Query: 84 ITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKS 143
+ +A + + F +R+++R G +P+ + P V+++C D+ + +++H + K
Sbjct: 808 VGGFA-KVGDYMNCFGTFRELIRCG-ARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKF 865
Query: 144 GFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASL 203
G + V ALV+ Y + +I++A L
Sbjct: 866 GLDLDHFVCAALVDMYGKCR--------------------------------EIEDARFL 893
Query: 204 FDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHT 263
FD M +RD+ W +I G + G ++++ F +M E + P++V +V + A
Sbjct: 894 FDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREE---GVVPDKVAMVTVVFACAKL 950
Query: 264 GMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMI 323
G + + I Y+ R LD + A+IDM+ KCG ++ AR FDR +K + SW++MI
Sbjct: 951 GAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMI 1010
Query: 324 NSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT 383
++ HGQ ++ +F M+R I P+ +T +SLL AC+H GLVE+G +F M +
Sbjct: 1011 AAYGYHGQGRKALDLFPMMLR---SGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWED 1067
Query: 384 YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEF 443
Y + ++HY C+VDLLGRAGR +EAL+++ M E DE +WG+ L C+ + AE
Sbjct: 1068 YSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEK 1127
Query: 444 AVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVH 503
A L+E+ P N G+ I+L+NIY G+W++V K+R ++ R K PG +WIEVD + H
Sbjct: 1128 AATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSH 1187
Query: 504 QFHSLDKTHPRTEEIYDALESM 525
QF D THPR++EIY+ L+S+
Sbjct: 1188 QFSVGDTTHPRSKEIYEMLKSL 1209
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 265/473 (56%), Gaps = 13/473 (2%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
+ + +AR +FD + + +TA+IT Y SQ A L+ ++ + N I
Sbjct: 179 VGEMDFARLVFDKSSLRDAVSFTALITGYVSQGC-LDDARRLFDEIPVKDVVSWNAMISG 237
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIG--IARKLFDEM 176
+V + +M ++ + V+ ++RSG ++G I + D
Sbjct: 238 YVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSAC---GHTRSG-ELGKWIGSWVRDNG 293
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
N+ A+I Y + G+ A LFD + ++DV +WN++I G + L+ +A++ F
Sbjct: 294 FGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFE 353
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL-DSFISNALIDMY 295
M + N++PN VT + L A G L LGK +H Y+ +N + ++ + +LIDMY
Sbjct: 354 VM---LRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMY 410
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCG ++ A R F + L SWN+M++ FA+HG +E ++ +F EM+ RPD +
Sbjct: 411 AKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMV--NKGLFRPDDI 468
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF+ +L+ACT GLV+ G YF+ M + Y I P+++HYGC++DLL RA +FEEA ++K
Sbjct: 469 TFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKN 528
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M++EPD +WGSLL+ CK +GR +F E+ ++L +++P N G ++L+NIY G+WD+V
Sbjct: 529 MEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDV 588
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
++R L D+ K PGC+ IE+D VH+F DK HP IY L + L
Sbjct: 589 ARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKL 641
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 235/445 (52%), Gaps = 19/445 (4%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFD---HL 72
L +LE+C +IN KQ+ S + G + T F KL+ FC + S +L+YA +F+
Sbjct: 32 LNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQH 91
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
N +++ ++I Y+ + SS R M+ G QPN +P + KSC +
Sbjct: 92 HKHNVFIWNSLIRGYSLSSSPLSSLHLFSR-MLYYG-VQPNSHTFPFLFKSCTKAKATHE 149
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
K +H +K P V T++++ Y+ G ++ AR +FD+ S R+ VS+TA+I+GY
Sbjct: 150 GKQLHAHALKLALHFNPHVHTSVIHMYASVG-EMDFARLVFDKSSLRDAVSFTALITGYV 208
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
G + +A LFD +P +DV +WN++I+G Q+G F +AI F M N+ PN+ T
Sbjct: 209 SQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQ---EANVLPNKST 265
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
+V LSA GHT +LGK I +V NG + ++NALIDMY KCG AR FD
Sbjct: 266 MVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIE 325
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+K + SWN+MI ++ E ++ +FE M+R N++P+ VTF+ +L+AC G ++
Sbjct: 326 EKDVISWNTMIGGYSYLSLYEEALALFEVMLRS---NVKPNDVTFLGILHACACLGALDL 382
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G+ + K R + L+D+ + G E A V + M + W ++L+G
Sbjct: 383 GKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMH-SRNLASWNAMLSGF 441
Query: 433 KIYGRTD-----FAEFAVKKLIEID 452
++G + F+E K L D
Sbjct: 442 AMHGHAERALALFSEMVNKGLFRPD 466
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/452 (34%), Positives = 251/452 (55%), Gaps = 40/452 (8%)
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
T Y A+++ Y S + S A L+R M G P N ++ +C + +
Sbjct: 117 TVCYNALVSGYVSN-SKCSEAVLLFRQMNEEGVPV-NSVTLLGLIPACVSPINLELGSSL 174
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGD 196
H +K GF+ V + Y + G+ + A+KLFDEM + ++SW AM+SGY
Sbjct: 175 HCSTLKYGFDSDVSVVNCFITMYMKCGS-VNYAQKLFDEMPVKGLISWNAMVSGY----- 228
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
QNGL ++ + +R M M + + P+ VTLV
Sbjct: 229 --------------------------AQNGLATNVLELYRNMDM---NGVHPDPVTLVGV 259
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
LS+ + G +G + + +G + F++NALI+MY +CG+L +A+ FD ++ L
Sbjct: 260 LSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTL 319
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
SW ++I + +HG E ++ +F+EM+R I PDG F+ +L+AC+H GL +QG Y
Sbjct: 320 VSWTAIIGGYGMHGHGEIAVQLFKEMIR---SGIEPDGTAFVCVLSACSHAGLTDQGLEY 376
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
FK+M + Y++EP EHY C+VDLLGRAGR +EA +++ M I+PD VWG+LL CKI+
Sbjct: 377 FKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHK 436
Query: 437 RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWI 496
+ AE A +++IE++P N GY ++L+NIY V ++R M+K++ K PGCS++
Sbjct: 437 NVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYV 496
Query: 497 EVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
E+ +VH F D+ H +++EIY LE + A+
Sbjct: 497 ELKGRVHPFIVGDRNHLQSDEIYRVLEELEAI 528
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 181/402 (45%), Gaps = 51/402 (12%)
Query: 97 AFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALV 156
A SLY M+R G +PN F +P LKSC + H QI K G P V+T L+
Sbjct: 33 ALSLYPQMLRHGD-RPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLI 91
Query: 157 NSYSRSGNDIGIARKLFDE--MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA 214
+ Y + G+ + ARK+F+E S + V + A++SGY A LF M + VP
Sbjct: 92 SMYCK-GSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPV 150
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
N VTL+ + A L+LG +H
Sbjct: 151 ----------------------------------NSVTLLGLIPACVSPINLELGSSLHC 176
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
+ G D D + N I MY KCGS+ A++ FD K L SWN+M++ +A +G + N
Sbjct: 177 STLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATN 236
Query: 335 SICVFEEMMRCQDHN-IRPDGVTFISLLNACTHGGLVEQG-RAYFKLMTKTYRIEPQIEH 392
+ E+ R D N + PD VT + +L++C + G G FK+ + P + +
Sbjct: 237 VL----ELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNN 292
Query: 393 YGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE-- 450
L+++ R G +A V GM E V W +++ G ++G + A K++I
Sbjct: 293 --ALINMYARCGNLTKAQAVFDGMP-ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSG 349
Query: 451 IDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
I+P+ + +L+ G D+ + KM+K RN PG
Sbjct: 350 IEPDGTAFVCVLSAC-SHAGLTDQGLEYFKMMK-RNYQLEPG 389
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 150/357 (42%), Gaps = 56/357 (15%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRG-QPQPNQF 115
+K ++ YA+ +FD + + AM++ YA Q A++ LYR+M G P P
Sbjct: 198 MKCGSVNYAQKLFDEMPVKGLISWNAMVSGYA-QNGLATNVLELYRNMDMNGVHPDPVTL 256
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
+ VL SC ++ V +I SGF P + AL+N Y+R GN + A+ +FD
Sbjct: 257 V--GVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGN-LTKAQAVFDG 313
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSM----PDRDVPAWNSVIAGCTQNGLFSDA 231
M +R +VSWTA+I GY G + A LF M + D A+ V++ C+ GL
Sbjct: 314 MPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQG 373
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
+ +F+ M P + +
Sbjct: 374 LEYFKMMKRNYQLEPGPEHYS-------------------------------------CM 396
Query: 292 IDMYGKCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
+D+ G+ G LKEA+ + K W +++ + +H E + FE ++ +
Sbjct: 397 VDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE-----L 451
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC-LVDLLGRAGRF 406
P+ + + LL+ +G ++M K +++ + GC V+L GR F
Sbjct: 452 EPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLK---KDPGCSYVELKGRVHPF 505
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 97/219 (44%), Gaps = 10/219 (4%)
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
WN+ + + F A+S + +M + RPN T AL + + LG HG
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQM---LRHGDRPNAFTFPFALKSCAALSLPILGSQFHG 73
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN--SKKRLTSWNSMINSFALHGQS 332
+ + G + F+ LI MY K + AR+ F+ N S+K +N++++ + + +
Sbjct: 74 QITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKC 133
Query: 333 ENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEH 392
++ +F +M + + + VT + L+ AC +E G + T Y + +
Sbjct: 134 SEAVLLFRQM---NEEGVPVNSVTLLGLIPACVSPINLELGSS-LHCSTLKYGFDSDVSV 189
Query: 393 YGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
C + + + G A ++ M ++ + W ++++G
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVK-GLISWNAMVSG 227
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/464 (35%), Positives = 262/464 (56%), Gaps = 9/464 (1%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
R +FD + P L+T +I AY A L+R M G P+ V+ +C
Sbjct: 145 GRQVFDEMRQPGLVLWTLIIRAYVCV-TFPEKALELFRTMREVGL-TPDMVAVSTVVSAC 202
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ + K +H I KSG E V + L+++Y G+ + A + F E +N+V W
Sbjct: 203 GLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGS-LDYAYRFFQETPMKNIVVW 261
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
MI +++ LF SMPDRDV +WNS+I G + G + +A+++F M E S
Sbjct: 262 NTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEM--EFS- 318
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ PN +TL+ LSA G L G IH YV +N ++ D + ++LIDMY KCG + +A
Sbjct: 319 GVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKA 378
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ F+ ++++ L +W S++ A+HG+ E ++ F +M Q ++PD VT + +L+AC
Sbjct: 379 VQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQ---VQPDDVTMVGVLSAC 435
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
H GL++QG YF+ M K + + P++EHYG +VDLLGR G +EA +++ GM +E +E++
Sbjct: 436 AHAGLLDQGWWYFQSMEKVFGLVPKVEHYGXMVDLLGRMGCLKEAYDLIMGMPMEANEII 495
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+ L+ C+++ + E A ++L+ + P + +ML+N+Y E KWD +RK +K
Sbjct: 496 WGAFLSACRVHNNVELGEVAARRLLGLXPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKK 555
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
+ K+PGCS IEV+ VH F D +HP EI +E + L
Sbjct: 556 KGLKKSPGCSSIEVNGSVHGFLVGDNSHPCYTEINSMVEKIEKL 599
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 173/417 (41%), Gaps = 73/417 (17%)
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
L N +++ MI LY R +PN + ++LK+ E +
Sbjct: 49 LDCANVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVK 108
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
+ VH +V++GF V AL+ Y G +G R++FDEM +V WT +I Y
Sbjct: 109 EGEEVHASVVRTGFACSEFVSGALLGFYVACGL-VGKGRQVFDEMRQPGLVLWTLIIRAY 167
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
V + A LF +M R +G+ P+ V
Sbjct: 168 VCVTFPEKALELFRTM----------------------------REVGLT------PDMV 193
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
+ +SA G G L + K +H ++ ++G+++D+F+S+ LI YG+CGSL A R F
Sbjct: 194 AVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQET 253
Query: 312 SKKRL-------------------------------TSWNSMINSFALHGQSENSICVFE 340
K + SWNSMI FA GQ + ++ F
Sbjct: 254 PMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFH 313
Query: 341 EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL 400
EM + + P+ +T +S L+AC G ++ G A+ + L+D+
Sbjct: 314 EM---EFSGVSPNALTLLSTLSACASHGALDTG-AWIHAYVDKNDMNRDGSLDSSLIDMY 369
Query: 401 GRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA--EFAVKKLIEIDPNN 455
+ G ++A+++ + D W S++ G ++GR + A F+ K ++ P++
Sbjct: 370 SKCGDIDKAVQIFEE-STRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDD 425
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 11/233 (4%)
Query: 199 NAASLFDSMPDRDVPAWNSVIAGCTQNGLFS-DAISFFRRMGMEVSDNIRPNQVTLVCAL 257
+AAS D +V WN++I +NGL + D + G+ +RPN T + L
Sbjct: 44 SAASRLDC---ANVFVWNTMIRKQVENGLITRDPPLLYYMQGLRA--GLRPNGHTFMYLL 98
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
A+ ++ G+ +H V R G F+S AL+ Y CG + + R+ FD + L
Sbjct: 99 KALVSGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLV 158
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
W +I ++ E ++ +F M ++ + PD V ++++AC G + +A
Sbjct: 159 LWTLIIRAYVCVTFPEKALELFRTM---REVGLTPDMVAVSTVVSACGLLGDLGVAKAMH 215
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
+ K+ IE L+ G G + A + ++ + VVW ++++
Sbjct: 216 CFIEKS-GIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIH 266
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 290/517 (56%), Gaps = 44/517 (8%)
Query: 15 QVLAILERCNHINH-LKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARFIFDHL 72
+ +++L+ C H LKQ+ +F G S N K + F + LS ++YA +F +
Sbjct: 19 KCISLLQFCASSKHKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVI 78
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
PN + + +I YA + + S AF YR MV +P+ YP +LK+ L R
Sbjct: 79 HNPNVFTWNTIIRGYA-ESDNPSPAFLFYRQMVVSCV-EPDTHTYPFLLKAISKSLNVRE 136
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+ +H+ +++GFE V+ +L++ Y+
Sbjct: 137 GEAIHSVTIRNGFESLVFVQNSLLHIYAA------------------------------- 165
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
GD ++A +F+ M +RD+ AWNS+I G NG ++A++ FR M +E + P+ T
Sbjct: 166 -CGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVE---GVEPDGFT 221
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
+V LSA G L+LG+ +H Y+ + GL +S ++N+L+D+Y KCG+++EA+R F S
Sbjct: 222 VVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMS 281
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
++ SW S+I A++G E ++ +F+EM + + P +TF+ +L AC+H G++++
Sbjct: 282 ERNAVSWTSLIVGLAVNGFGEEALELFKEM---EGQGLVPSEITFVGVLYACSHCGMLDE 338
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G YF+ M + I P+IEHYGC+VDLL RAG ++A E ++ M ++P+ V+W +LL C
Sbjct: 339 GFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGAC 398
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK-MLKDRNAYKTP 491
I+G E A L+ ++P + G ++L+N+Y +W +V+ +R+ MLKD KTP
Sbjct: 399 TIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKD-GVKKTP 457
Query: 492 GCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
G S +E+ +V++F D++HP+++++Y LE + L
Sbjct: 458 GYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITEL 494
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/469 (35%), Positives = 255/469 (54%), Gaps = 17/469 (3%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + L AR IFD + + + MI+ YA Q A L+ + R +
Sbjct: 215 VKRNRLVDARGIFDRMPERDEVSWNTMISGYA-QNGELLEAQRLFEESPVRDVFTWTAMV 273
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+V D E+R ++ E+ V A++ Y + + AR+LF+ M
Sbjct: 274 SGYVQNGMLD--EAR-------RVFDGMPEKNSVSWNAIIAGYVQC-KRMDQARELFEAM 323
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+NV SW MI+GY + GDI A + FD MP RD +W ++IAG Q+G +A+ F
Sbjct: 324 PCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFV 383
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M D R N+ T LS L+LGK +HG V + GL+ ++ NAL+ MY
Sbjct: 384 EMK---RDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYC 440
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG++ +A F+ +K + SWN+MI +A HG + ++ +FE M + I PD VT
Sbjct: 441 KCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKT---GILPDDVT 497
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+ +L+AC+H GLV++G YF MT+ Y I +HY C++DLLGRAGR ++A ++K M
Sbjct: 498 MVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNM 557
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
EPD WG+LL +I+G T+ E A K + E++P+N G ++L+N+Y G+W +V
Sbjct: 558 PFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVG 617
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
++R ++DR K PG SW+EV ++H F D HP + IY LE +
Sbjct: 618 RMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEEL 666
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 135/270 (50%), Gaps = 24/270 (8%)
Query: 162 SGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAG 221
S + +AR+LF++M R++VSW MISG R +++ A LFD MP+RDV +WN++++G
Sbjct: 92 SNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSG 151
Query: 222 CTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL 281
QNG +A F M + N ++ L+A G ++ + + + +
Sbjct: 152 YAQNGYVKEAKEIFDEMPCK-------NSISWNGMLAAYVQNGRIEDARRL----FESKA 200
Query: 282 DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEE 341
D + N ++ Y K L +AR FDR ++ SWN+MI+ +A +G+ + +FEE
Sbjct: 201 DWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE 260
Query: 342 MMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG 401
+R D T+ ++++ G++++ R F M + + + ++
Sbjct: 261 ------SPVR-DVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVS-----WNAIIAGYV 308
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ R ++A E+ + M + + W +++ G
Sbjct: 309 QCKRMDQARELFEAMPCQ-NVSSWNTMITG 337
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/459 (33%), Positives = 257/459 (55%), Gaps = 14/459 (3%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQ-PQPNQFIYPHVLKS 123
A + L + L+ A+I A+AS +A LY ++R G P P+ P +LKS
Sbjct: 41 AALVTSGLLRRSAELHDALIRAHASS-GRPQAALPLYAHLIRAGLFPTPHTL--PSLLKS 97
Query: 124 ---CPDVLESRGTKM-VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
P V +R + VH V+ G + +V AL+ ++ + A L +
Sbjct: 98 LALSPAVPGARRLALAVHAHAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAV 157
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
+ ++ +I+ + R G + +A SLFD MP+R+ +W++++ G Q G +A+ F +M
Sbjct: 158 DASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQ 217
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
+ +RP+ LV L+A G L+ GK +HGY+ N + + F+ AL+DMY KCG
Sbjct: 218 ---AQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCG 274
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
++ F+ K + +W +MI A+HG+ +S+ +F +M + ++PD + FI
Sbjct: 275 EVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQM---ESSGVKPDDIAFIG 331
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
L ACTH GLV++GR F M Y I+P+IEHYGC+VDLL R G EA ++V+ M ++
Sbjct: 332 ALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMK 391
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVR 479
PD ++WG+L+ GC+ + + AE+ +K IE++P+ G ++L NIY G+ R++R
Sbjct: 392 PDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIR 451
Query: 480 KMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
+++++ KTPGCS +E+ +HQF D +HPR ++I
Sbjct: 452 NLMREKGVEKTPGCSNVEIKGVIHQFIVGDLSHPRIKDI 490
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/508 (34%), Positives = 262/508 (51%), Gaps = 53/508 (10%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A +FD L + + +MI+ Y S +Y+ M+ G I VL C
Sbjct: 66 ASELFDKLCDRDVISWNSMISGYVSN-GLTERGLGIYKQMMYLGIDVDLATIIS-VLVGC 123
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
K VH+ +KS FE+ L++ YS+ G D+ A ++F++M +RNVVSW
Sbjct: 124 AKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG-DLDGALRVFEKMGERNVVSW 182
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDR----DVPAWNSVIAGCTQNGLFSDA--------- 231
T+MI+GYTR G A L M DV A S++ C ++G +
Sbjct: 183 TSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 242
Query: 232 -------------ISFFRRMG-----------MEVSD---------NIRPNQVTLVCALS 258
+ + + G M V D ++P+ T+ C L
Sbjct: 243 NNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILP 302
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
A L+ GK IHGY+ RNG D ++NAL+D+Y KCG L AR FD K L S
Sbjct: 303 ACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVS 362
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
W MI + +HG +I F EM +D I PD V+FIS+L AC+H GL+EQG +F
Sbjct: 363 WTVMIAGYGMHGYGNEAIATFNEM---RDAGIEPDEVSFISILYACSHSGLLEQGWRFFY 419
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
+M + IEP++EHY C+VDLL R G +A + ++ + I PD +WG+LL GC+IY
Sbjct: 420 IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDI 479
Query: 439 DFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV 498
+ AE +++ E++P N GY ++LANIY E KW+EV+++R+ + + K PGCSWIE+
Sbjct: 480 ELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEI 539
Query: 499 DKQVHQFHSL-DKTHPRTEEIYDALESM 525
+V+ F S + +HP +++I L+ M
Sbjct: 540 KGRVNLFVSGNNSSHPHSKKIESLLKKM 567
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 147/304 (48%), Gaps = 29/304 (9%)
Query: 155 LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIK---------------- 198
LV+ Y+ G D+ R++FD M +NV W M+S Y ++GD K
Sbjct: 2 LVSFYATCG-DLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 60
Query: 199 ----NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
+A+ LFD + DRDV +WNS+I+G NGL + +++M + I + T++
Sbjct: 61 KRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQM---MYLGIDVDLATII 117
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
L +G L LGK +H ++ + SN L+DMY KCG L A R F++ ++
Sbjct: 118 SVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER 177
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ SW SMI + G S+ +I + ++M + ++ D V S+L+AC G ++ G+
Sbjct: 178 NVVSWTSMIAGYTRDGWSDGAIILLQQM---EKEGVKLDVVAITSILHACARSGSLDNGK 234
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
+ K + + L+D+ + G E A V M ++ D + W +++ K
Sbjct: 235 DVHDYI-KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK-DIISWNTMVGELKP 292
Query: 435 YGRT 438
RT
Sbjct: 293 DSRT 296
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/524 (32%), Positives = 282/524 (53%), Gaps = 61/524 (11%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL--KLSNLTYARFIFDHLTTP 75
AIL C + ++ Q + +++ F R L K +L A +FD +
Sbjct: 248 AILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPER 307
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYR-------------DMVRRGQP-------QPNQF 115
N +TAMI+AY SQ +AS A +L+ D ++ P +PN+F
Sbjct: 308 NVVSWTAMISAY-SQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEF 366
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
+ VL SC L + +H+ I+K +E + V ++L++ Y++ G
Sbjct: 367 TFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGK----------- 415
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
I A ++F+ +P+RDV + ++I+G Q GL +A+ F
Sbjct: 416 ---------------------IHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELF 454
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
RR+ E ++ N VT L+A+ L LGK +H +V R+ + + N+LIDMY
Sbjct: 455 RRLQGE---GMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMY 511
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCG+L +RR FD ++ + SWN+M+ ++ HG+ + +F +MR ++ ++PD V
Sbjct: 512 SKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFT-LMR-EETKVKPDSV 569
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTK-TYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
T +++L+ C+HGGL ++G F M+ +EP++EHYGC+VDLLGR+GR EEA E +K
Sbjct: 570 TILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIK 629
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M EP +WGSLL C+++ D EFA ++L+EI+P N G ++L+N+Y G+W++
Sbjct: 630 KMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWED 689
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
V +R ++ + K PG S IE+D+ +H FH+ D++HPR EEI
Sbjct: 690 VSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEI 733
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 181/407 (44%), Gaps = 63/407 (15%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
Y +L C + R + VH ++K+ + + T L+ Y++ + +G A +FDEM
Sbjct: 246 YNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKC-DSLGDAHNVFDEM 304
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS-DAISFF 235
+RNVVSWTAMIS Y++ G A +LF + DV + G+++ D +
Sbjct: 305 PERNVVSWTAMISAYSQRGYASQALNLFFA----DVKI--------SLTGVYAIDKLKLS 352
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
V PN+ T L++ + LG+ IH + + + F+ ++L+DMY
Sbjct: 353 NPNRPWVC--TEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMY 410
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
K G + EAR F+ ++ + S ++I+ +A G E ++ +F R Q ++ + V
Sbjct: 411 AKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFR---RLQGEGMKSNYV 467
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE-------- 407
T+ +L A + ++ G+ + ++ I + L+D+ + G
Sbjct: 468 TYTGVLTALSGLAALDLGKQVHNHVLRS-EIPSFVVLQNSLIDMYSKCGNLTYSRRIFDT 526
Query: 408 --------------------EALEVVK-------GMKIEPDEVVWGSLLNGCKIYGRTD- 439
E EV+K K++PD V ++L+GC G D
Sbjct: 527 MYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDK 586
Query: 440 ----FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK-VRKM 481
F + + K IE++P YG ++ ++ G G+ +E + ++KM
Sbjct: 587 GLNIFNDMSSGK-IEVEPKMEHYGCVV-DLLGRSGRVEEAFEFIKKM 631
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 127/272 (46%), Gaps = 26/272 (9%)
Query: 1 MVSVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS 60
+ S T+ L L +Q+ +++ + N+ +H+ +G S + YA K
Sbjct: 372 LTSCTSSLGFILGRQIHSLIIKLNYEDHV--------FVGSSLLDMYA---------KDG 414
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
+ AR +F+ L + TA+I+ YA Q A L+R + G + N Y V
Sbjct: 415 KIHEARTVFECLPERDVVSCTAIISGYA-QLGLDEEALELFRRLQGEGM-KSNYVTYTGV 472
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
L + + K VH +++S + V++ +L++ YS+ GN + +R++FD M +R
Sbjct: 473 LTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGN-LTYSRRIFDTMYERT 531
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDR-----DVPAWNSVIAGCTQNGLFSDAISFF 235
V+SW AM+ GY++ G+ + LF M + D +V++GC+ GL ++ F
Sbjct: 532 VISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIF 591
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
M + + P C + +G +G ++
Sbjct: 592 NDMSSGKIE-VEPKMEHYGCVVDLLGRSGRVE 622
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/512 (33%), Positives = 273/512 (53%), Gaps = 48/512 (9%)
Query: 25 HINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL-------SNLTYARFIFDHLTTPNT 77
++ LKQ+ + + G + + KLV + + + + YA +F + P+T
Sbjct: 13 NVGTLKQIHALMIVNGLTSNVGFLRKLVLTTAMSMVGPNATSAVIRYALQMFAQIPQPDT 72
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+++ I +SQ A +LY M +R +P+ F +P VLK+C + VH
Sbjct: 73 FMWNTYIRG-SSQSHDPVHAVALYAQMDQR-SVKPDNFTFPFVLKACTKLFWVNTGSAVH 130
Query: 138 TQIVKSGFEQYPVVE-------------------------------TALVNSYSRSGNDI 166
++++ GF VV +AL+ Y++ G D+
Sbjct: 131 GRVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSALIAGYAQRG-DL 189
Query: 167 GIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNG 226
+ARKLFDEM R++VSW MI+ YT+ G++++A LFD P +D+ +WN++I G
Sbjct: 190 SVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNALIGGYVLRN 249
Query: 227 LFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR-NGLDLDS 285
L +A+ F M P++VT++ LSA G L+ G+ +H + N L +
Sbjct: 250 LNREALELFDEM---CGVGECPDEVTMLSLLSACADLGDLESGEKVHAKIIEMNKGKLST 306
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
+ NAL+DMY KCG++ +A R F K + SWNS+I+ A HG +E S+ +F EM
Sbjct: 307 LLGNALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAEESLGLFREMKMT 366
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
+ + PD VTF+ +L AC+H G V++G YF LM Y+IEP I H GC+VD+LGRAG
Sbjct: 367 K---VCPDEVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRAGL 423
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANI 465
+EA + MKIEP+ +VW SLL CK++G + A+ A ++L+ + + G ++L+N+
Sbjct: 424 LKEAFNFIASMKIEPNAIVWRSLLGACKVHGDVELAKRANEQLLRMRGDQSGDYVLLSNV 483
Query: 466 YGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
Y G+WD VRK++ D K G S++E
Sbjct: 484 YASQGEWDGAENVRKLMDDNGVTKNRGSSFVE 515
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 179/520 (34%), Positives = 281/520 (54%), Gaps = 66/520 (12%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL--- 121
AR +FD + N +TAM+ Y + S A +L+ M P+ N + +L
Sbjct: 179 AREVFDRMPERNVVSWTAMVRGYVKE-GMISEAETLFWQM-----PEKNVVSWTVMLGGL 232
Query: 122 -------KSC------PDVLESRGTKMV--HTQI-----VKSGFEQYP----VVETALVN 157
++C P+ T M+ + Q+ + F++ P V T ++
Sbjct: 233 LQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMIT 292
Query: 158 SYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNS 217
Y ++ + IARKLF+ M ++N VSWTAM+ GYT G + A+ LF++MP + V A N+
Sbjct: 293 GYVQN-QQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNA 351
Query: 218 VIAGCTQNG------------------LFSDAISFFRRMGMEVS----------DNIRPN 249
+I QNG +S I + R G+E+ + IRPN
Sbjct: 352 MILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPN 411
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+L+ LS L G+ IH + R+ DLD ++++ L+ MY KCG+L +A++ FD
Sbjct: 412 FPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFD 471
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
R + K + WNS+I +A HG ++ VF +M I PD VTF+ +L+AC++ G
Sbjct: 472 RFAVKDVVMWNSIITGYAQHGLGVEALRVFHDM---HFSGIMPDDVTFVGVLSACSYTGN 528
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
V++G F M Y++E +IEHY C+VDLLGRAG+ EA+++++ M +E D ++WG+LL
Sbjct: 529 VKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
C+ + + D AE A KKL+ ++P N G I+L+NIY G+WD+V ++R+ ++DR K
Sbjct: 589 GACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSK 648
Query: 490 TPGCSWIEVDKQVHQFHSLDKT-HPRTEEIYDALESMVAL 528
PGCSWI V+K+VH+F D + HP EI LE + L
Sbjct: 649 YPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGL 688
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 171/431 (39%), Gaps = 100/431 (23%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+L + AR +FD + N + +++ Y +R Q N F
Sbjct: 110 RLGQIEKARVVFDEMRDKNIISWNSIVAGYFQN---------------KRPQEAQNMF-- 152
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
D + R T + LV+ Y +G I AR++FD M
Sbjct: 153 --------DKMSERNT----------------ISWNGLVSGYINNGM-INEAREVFDRMP 187
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+RNVVSWTAM+ GY + G I A +LF MP+++V +W ++ G Q G +A F
Sbjct: 188 ERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDM 247
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGML----------QLGKVIHGYVYR--------- 278
M E R N + C + + ML +I GYV
Sbjct: 248 MP-EKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKL 306
Query: 279 --------------------------------NGLDLDSFIS-NALIDMYGKCGSLKEAR 305
N + + S ++ NA+I +G+ G + +AR
Sbjct: 307 FEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKAR 366
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
+ FD+ +K +W++MI + G +++ +F M R IRP+ + IS+L+ C
Sbjct: 367 QVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQR---EGIRPNFPSLISVLSVCA 423
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
++ GR + ++ + + + L+ + + G +A +V ++ D V+W
Sbjct: 424 GLANLDHGREIHAQLVRS-QFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVK-DVVMW 481
Query: 426 GSLLNGCKIYG 436
S++ G +G
Sbjct: 482 NSIITGYAQHG 492
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 33/272 (12%)
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
A+ +FD+MS+RN +SW ++SGY G I A +FD MP+R+V +W +++ G + G+
Sbjct: 148 AQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMI 207
Query: 229 SDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG-YVYRNGLDLDSFI 287
S+A + F +M N V+ L G+LQ G++ ++ + D
Sbjct: 208 SEAETLFWQMP-------EKNVVSWTVMLG-----GLLQEGRIDEACRLFDMMPEKDVVT 255
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
+I Y + G L EAR FD ++ + SW +MI + + Q + + +FE M
Sbjct: 256 RTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVM----- 310
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC--LVDLLGRAGR 405
+ V++ ++L T+ G +++ F M P C ++ G+ G
Sbjct: 311 --PEKNEVSWTAMLKGYTNCGRLDEASELFNAM-------PIKSVVACNAMILCFGQNGE 361
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
+A +V M+ E DE W +++ K+Y R
Sbjct: 362 VPKARQVFDQMR-EKDEGTWSAMI---KVYER 389
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 81/210 (38%), Gaps = 36/210 (17%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNF--YAFKLVRFCTLKLSNLTYARFIFDHLT 73
++++L C + +L + L +SQ + Y ++ +K NL A+ +FD
Sbjct: 415 LISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFA 474
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
+ ++ ++IT YA Q A ++ DM G P+ + VL +C
Sbjct: 475 VKDVVMWNSIITGYA-QHGLGVEALRVFHDMHFSG-IMPDDVTFVGVLSACS-------- 524
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+T VK G E + +ET ++ + + M+ R
Sbjct: 525 ---YTGNVKKGLEIFNSMETKY--------------------QVEQKIEHYACMVDLLGR 561
Query: 194 VGDIKNAASLFDSMP-DRDVPAWNSVIAGC 222
G + A L + MP + D W +++ C
Sbjct: 562 AGKLNEAMDLIEKMPMEADAIIWGALLGAC 591
>gi|357151860|ref|XP_003575929.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14820-like, partial [Brachypodium
distachyon]
Length = 498
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 159/443 (35%), Positives = 263/443 (59%), Gaps = 11/443 (2%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + + M+ +Y + + + L + ++R + P+Q I VL +C
Sbjct: 47 ARRVFDGMPERDLVAWGVMLDSYFNTQNYRETLLLLNK--MKRSRVVPDQVILATVLSTC 104
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
R K +H+ I S + +AL+N Y+ S D+ +A K++ M +++VS
Sbjct: 105 GHTRHLRSGKTIHSYIQVSDIFVDARLSSALINMYA-SCMDMEMADKIYSGMQRKDLVSS 163
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM-GMEVS 243
TAM+ GY + G I+ A S+F+ M ++DV +W+++I+ +N S+ ++ F +M G VS
Sbjct: 164 TAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAENNQPSEVLNLFNKMQGCGVS 223
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
P+++T++ +SA + G L + IH V +G I NALIDM+ KCGSL
Sbjct: 224 ----PDEITMLSVISACANIGSLDKARWIHSIVGNHGFYKILSICNALIDMFSKCGSLTL 279
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A F+ +K + +W SMI +FA+HG +++ +F +M + + P+GVTF+ LL A
Sbjct: 280 ALNMFNAMPRKNVITWTSMIAAFAMHGDGPSALTLFGQM---KGEGVEPNGVTFLVLLYA 336
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C H GLV +GR+ F+ M + YRIEP+ EHYGC+VDL+GRA +EA+++++ M I P+
Sbjct: 337 CCHAGLVYEGRSLFECMLQEYRIEPKHEHYGCMVDLMGRAKLMQEAVDLIESMHIRPNVA 396
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+WGSLL C ++G + EFA KK++E+DPN+ G ++L+NI+ + G W+ +K+R M+K
Sbjct: 397 IWGSLLAACWMHGDIELGEFAAKKILELDPNHDGAYVLLSNIHAKSGNWNNAQKLRVMMK 456
Query: 484 DRNAYKTPGCSWIEVDKQVHQFH 506
K G SW+E++ VH F
Sbjct: 457 VHGVSKETGYSWLELNCTVHGFQ 479
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 140/311 (45%), Gaps = 41/311 (13%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
TA++ Y + A +FD MP+RD+ AW ++ + + + +M
Sbjct: 32 TALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNTQNYRETLLLLNKMK---RS 88
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC------ 298
+ P+QV L LS GHT L+ GK IH Y+ + + +D+ +S+ALI+MY C
Sbjct: 89 RVVPDQVILATVLSTCGHTRHLRSGKTIHSYIQVSDIFVDARLSSALINMYASCMDMEMA 148
Query: 299 -------------------------GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSE 333
G ++ AR F+ ++K + SW++MI+++A + Q
Sbjct: 149 DKIYSGMQRKDLVSSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAENNQPS 208
Query: 334 NSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
+ +F +M C + PD +T +S+++AC + G +++ R + + + +
Sbjct: 209 EVLNLFNKMQGC---GVSPDEITMLSVISACANIGSLDKAR-WIHSIVGNHGFYKILSIC 264
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR--TDFAEFAVKKLIEI 451
L+D+ + G AL + M + + W S++ ++G + F K +
Sbjct: 265 NALIDMFSKCGSLTLALNMFNAMP-RKNVITWTSMIAAFAMHGDGPSALTLFGQMKGEGV 323
Query: 452 DPNNGGYGIML 462
+PN + ++L
Sbjct: 324 EPNGVTFLVLL 334
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 13/216 (6%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQF 115
K + AR IF+H+ + ++AMI+AYA +QP S +L+ M G P++
Sbjct: 172 KNGKIEIARSIFNHMAEKDVVSWSAMISAYAENNQP---SEVLNLFNKMQGCG-VSPDEI 227
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
V+ +C ++ + +H+ + GF + + AL++ +S+ G+ + +A +F+
Sbjct: 228 TMLSVISACANIGSLDKARWIHSIVGNHGFYKILSICNALIDMFSKCGS-LTLALNMFNA 286
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVP----AWNSVIAGCTQNGLFSDA 231
M +NV++WT+MI+ + GD +A +LF M V + ++ C GL +
Sbjct: 287 MPRKNVITWTSMIAAFAMHGDGPSALTLFGQMKGEGVEPNGVTFLVLLYACCHAGLVYEG 346
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
S F M E I P C + +G ++Q
Sbjct: 347 RSLFECMLQEY--RIEPKHEHYGCMVDLMGRAKLMQ 380
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 8/181 (4%)
Query: 273 HGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQS 332
HG R G D D F+ AL+ Y C + EARR FD ++ L +W M++S+
Sbjct: 16 HGIAVRVGADEDGFVGTALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNTQNY 75
Query: 333 ENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEH 392
++ + +M R + + PD V ++L+ C H + G+ + + I
Sbjct: 76 RETLLLLNKMKRSR---VVPDQVILATVLSTCGHTRHLRSGKTIHSYI-QVSDIFVDARL 131
Query: 393 YGCLVDLLGRAGRFEEALEVVKGMK----IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL 448
L+++ E A ++ GM+ + +V G NG R+ F A K +
Sbjct: 132 SSALINMYASCMDMEMADKIYSGMQRKDLVSSTAMVCGYAKNGKIEIARSIFNHMAEKDV 191
Query: 449 I 449
+
Sbjct: 192 V 192
>gi|147767785|emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]
Length = 967
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/409 (38%), Positives = 241/409 (58%), Gaps = 35/409 (8%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ ++ +C + + +M+HT VKSGF TALV+ Y++ G + +ARK FDEM
Sbjct: 570 WKALISACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGL-LSLARKQFDEM 628
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+ R+V +W +MI+GY R GD++ A LF MP R+V +W ++I+G QNG ++ A+S F
Sbjct: 629 TVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMF- 687
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+ ME +RPN+VTL L A + G L++G+ I Y NG + ++SNAL++MY
Sbjct: 688 -LMMEEETEMRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYA 746
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
+CG + +A W VFEE + + PD VT
Sbjct: 747 RCGRIDKA--------------WG-----------------VFEE-IDGRREGAAPDDVT 774
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
F+ +L ACTHGG+V +G+ +F+ M + + I P++EHYGC+VDLLGRAG EA +++ M
Sbjct: 775 FVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRM 834
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
+EPD VVWG+LL C +G + AE A L E++P+N G ++L+NIY G+WD V
Sbjct: 835 PMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIYATAGRWDGVA 894
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
++RK++K K G S+IE +H+F D++H R++EIY L+ +
Sbjct: 895 RLRKLMKGGKITKAAGYSFIEEGGHIHKFIVEDRSHSRSDEIYALLDEV 943
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 101/250 (40%), Gaps = 32/250 (12%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+ +L A +F + N +TAMI+ YA Q + A S++ M + +PN+
Sbjct: 645 RCGDLEGALELFRLMPARNVTSWTAMISGYA-QNGQYAKALSMFLMMEEETEMRPNEVTL 703
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
VL +C ++ + + +G+ + V AL+ Y+R G I A +F+E+
Sbjct: 704 ASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGR-IDKAWGVFEEID 762
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
R R G + PD DV + V+ CT G+ + FF
Sbjct: 763 GR-------------REG----------AAPD-DV-TFVGVLLACTHGGMVVEGQHFFES 797
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M + S I P C + +G G L + H + R ++ DS + L+
Sbjct: 798 MERDFS--IAPKLEHYGCMVDLLGRAGEL---REAHDLILRMPMEPDSVVWGTLLGACSF 852
Query: 298 CGSLKEARRA 307
G ++ A +A
Sbjct: 853 HGHVELAEKA 862
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 179/520 (34%), Positives = 281/520 (54%), Gaps = 66/520 (12%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL--- 121
AR +FD + N +TAM+ Y + S A +L+ M P+ N + +L
Sbjct: 179 AREVFDRMPERNVVSWTAMVRGYVKE-GMISEAETLFWQM-----PEKNVVSWTVMLGGL 232
Query: 122 -------KSC------PDVLESRGTKMV--HTQI-----VKSGFEQYP----VVETALVN 157
++C P+ T M+ + Q+ + F++ P V T ++
Sbjct: 233 LQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMIT 292
Query: 158 SYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNS 217
Y ++ + IARKLF+ M ++N VSWTAM+ GYT G + A+ LF++MP + V A N+
Sbjct: 293 GYVQN-QQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNA 351
Query: 218 VIAGCTQNG------------------LFSDAISFFRRMGMEVS----------DNIRPN 249
+I QNG +S I + R G+E+ + IRPN
Sbjct: 352 MILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPN 411
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+L+ LS L G+ IH + R+ DLD ++++ L+ MY KCG+L +A++ FD
Sbjct: 412 FPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFD 471
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
R + K + WNS+I +A HG ++ VF +M I PD VTF+ +L+AC++ G
Sbjct: 472 RFAVKDVVMWNSIITGYAQHGLGVEALRVFHDM---HFSGIMPDDVTFVGVLSACSYTGN 528
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
V++G F M Y++E +IEHY C+VDLLGRAG+ EA+++++ M +E D ++WG+LL
Sbjct: 529 VKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
C+ + + D AE A KKL+ ++P N G I+L+NIY G+WD+V ++R+ ++DR K
Sbjct: 589 GACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSK 648
Query: 490 TPGCSWIEVDKQVHQFHSLDKT-HPRTEEIYDALESMVAL 528
PGCSWI V+K+VH+F D + HP EI LE + L
Sbjct: 649 YPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGL 688
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 171/431 (39%), Gaps = 100/431 (23%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+L + AR +FD + N + +++ Y +R Q N F
Sbjct: 110 RLGQIEKARVVFDEMRDKNIISWNSIVAGYFQN---------------KRPQEAQNMF-- 152
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
D + R T + LV+ Y +G I AR++FD M
Sbjct: 153 --------DKMSERNT----------------ISWNGLVSGYINNGM-INEAREVFDRMP 187
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+RNVVSWTAM+ GY + G I A +LF MP+++V +W ++ G Q G +A F
Sbjct: 188 ERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDM 247
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGML----------QLGKVIHGYVYR--------- 278
M E R N + C + + ML +I GYV
Sbjct: 248 MP-EKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKL 306
Query: 279 --------------------------------NGLDLDSFIS-NALIDMYGKCGSLKEAR 305
N + + S ++ NA+I +G+ G + +AR
Sbjct: 307 FEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKAR 366
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
+ FD+ +K +W++MI + G +++ +F M R IRP+ + IS+L+ C
Sbjct: 367 QVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQR---EGIRPNFPSLISVLSVCA 423
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
++ GR + ++ + + + L+ + + G +A +V ++ D V+W
Sbjct: 424 GLANLDHGREIHAQLVRS-QFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVK-DVVMW 481
Query: 426 GSLLNGCKIYG 436
S++ G +G
Sbjct: 482 NSIITGYAQHG 492
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 33/272 (12%)
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
A+ +FD+MS+RN +SW ++SGY G I A +FD MP+R+V +W +++ G + G+
Sbjct: 148 AQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMI 207
Query: 229 SDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG-YVYRNGLDLDSFI 287
S+A + F +M N V+ L G+LQ G++ ++ + D
Sbjct: 208 SEAETLFWQMP-------EKNVVSWTVMLG-----GLLQEGRIDEACRLFDMMPEKDVVT 255
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
+I Y + G L EAR FD ++ + SW +MI + + Q + + +FE M
Sbjct: 256 RTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVM----- 310
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC--LVDLLGRAGR 405
+ V++ ++L T+ G +++ F M P C ++ G+ G
Sbjct: 311 --PEKNEVSWTAMLKGYTNCGRLDEASELFNAM-------PIKSVVACNAMILCFGQNGE 361
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
+A +V M+ E DE W +++ K+Y R
Sbjct: 362 VPKARQVFDQMR-EKDEGTWSAMI---KVYER 389
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 81/210 (38%), Gaps = 36/210 (17%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNF--YAFKLVRFCTLKLSNLTYARFIFDHLT 73
++++L C + +L + L +SQ + Y ++ +K NL A+ +FD
Sbjct: 415 LISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFA 474
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
+ ++ ++IT YA Q A ++ DM G P+ + VL +C
Sbjct: 475 VKDVVMWNSIITGYA-QHGLGVEALRVFHDMHFSG-IMPDDVTFVGVLSACS-------- 524
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+T VK G E + +ET ++ + + M+ R
Sbjct: 525 ---YTGNVKKGLEIFNSMETKY--------------------QVEQKIEHYACMVDLLGR 561
Query: 194 VGDIKNAASLFDSMP-DRDVPAWNSVIAGC 222
G + A L + MP + D W +++ C
Sbjct: 562 AGKLNEAMDLIEKMPMEADAIIWGALLGAC 591
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 159/430 (36%), Positives = 249/430 (57%), Gaps = 41/430 (9%)
Query: 98 FSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVN 157
Y M+R P++ + +L+SC E++ + H QI+K GFE +++T L++
Sbjct: 15 LGFYSGMLRN-DVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLD 73
Query: 158 SYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA--W 215
Y++ G ++ A +LFD+M +R+ + W
Sbjct: 74 FYAKHGY--------------------------------VEEARNLFDNMTERNSNSVTW 101
Query: 216 NSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGY 275
N++I+ Q G F AIS F++M S+N++P +VT+V LSA H G L +G+ IHGY
Sbjct: 102 NTMISAYVQCGEFGTAISMFQQMQ---SENVKPTEVTMVSLLSACAHLGALDMGEWIHGY 158
Query: 276 VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
+ L +D + NALIDMY KCG+L+ A F S+K + WNS+I ++G+ E +
Sbjct: 159 IRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEA 218
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
I F M + I+PDGVTF+ +L+ C+H GL+ G+ YF M Y +EP +EHYGC
Sbjct: 219 IAAFIVM---EKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGC 275
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNN 455
+VDLLGRAG +EALE+++ M ++P+ +V GSLL C+I+ T E ++L+E+DP +
Sbjct: 276 MVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCD 335
Query: 456 GGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRT 515
GG + L+N+Y L +WD+V RK++ R +KTPGCS IEV+ VH+F + D +HP+
Sbjct: 336 GGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQF 395
Query: 516 EEIYDALESM 525
+I L+ +
Sbjct: 396 TQINAFLDEI 405
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 122/235 (51%), Gaps = 12/235 (5%)
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL 283
++G+ D + F+ M + +++ P++ + L + +G QLG+ H + + G +
Sbjct: 7 ESGVCPDFLGFYSGM---LRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEY 63
Query: 284 DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS--WNSMINSFALHGQSENSICVFEE 341
D + L+D Y K G ++EAR FD +++ S WN+MI+++ G+ +I +F++
Sbjct: 64 DMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQ 123
Query: 342 MMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG 401
M Q N++P VT +SLL+AC H G ++ G + +T R++ + L+D+
Sbjct: 124 M---QSENVKPTEVTMVSLLSACAHLGALDMGE-WIHGYIRTKRLKIDVVLGNALIDMYC 179
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD--FAEFAVKKLIEIDPN 454
+ G E A++V G+ + W S++ G + GR + A F V + I P+
Sbjct: 180 KCGALEAAIDVFHGLS-RKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPD 233
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 65 ARFIFDHLT--TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
AR +FD++T N+ + MI+AY Q +A S+++ M + +P + +L
Sbjct: 84 ARNLFDNMTERNSNSVTWNTMISAYV-QCGEFGTAISMFQQM-QSENVKPTEVTMVSLLS 141
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
+C + + +H I + V+ AL++ Y + G + A +F +S +N+
Sbjct: 142 ACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGA-LEAAIDVFHGLSRKNIF 200
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDR----DVPAWNSVIAGCTQNGLFSDAISFFRRM 238
W ++I G G + A + F M D + +++GC+ +GL S +F M
Sbjct: 201 CWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEM 260
Query: 239 ----GMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
G+E P C + +G G L+
Sbjct: 261 LGVYGLE------PGVEHYGCMVDLLGRAGYLK 287
>gi|110741594|dbj|BAE98745.1| hypothetical protein [Arabidopsis thaliana]
Length = 527
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/515 (32%), Positives = 289/515 (56%), Gaps = 42/515 (8%)
Query: 14 QQVLAILERCNHINHLKQLQS-FLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFD 70
Q+ L +L+RC++I+ KQ+ + F+ ++F A ++ C +++ YA IF
Sbjct: 31 QECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFR 90
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ P T+ + MI Y + + A Y +M++RG +P+ F YP +LK+C +
Sbjct: 91 GIDDPCTFDFNTMIRGYVNVMSF-EEALCFYNEMMQRGN-EPDNFTYPCLLKACTRLKSI 148
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
R K +H Q+ K G E V+ +L+N Y R G ++ ++ +F+++ + SW++M+S
Sbjct: 149 REGKQIHGQVFKLGLEADVFVQNSLINMYGRCG-EMELSSAVFEKLESKTAASWSSMVSA 207
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
R G G++S+ + FR GM N++ +
Sbjct: 208 --RAG-----------------------------MGMWSECLLLFR--GMCSETNLKAEE 234
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
+V AL A +TG L LG IHG++ RN +L+ + +L+DMY KCG L +A F +
Sbjct: 235 SGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQK 294
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
K+ ++++MI+ ALHG+ E+++ +F +M++ + PD V ++S+LNAC+H GLV
Sbjct: 295 MEKRNNLTYSAMISGLALHGEGESALRMFSKMIK---EGLEPDHVVYVSVLNACSHSGLV 351
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
++GR F M K ++EP EHYGCLVDLLGRAG EEALE ++ + IE ++V+W + L+
Sbjct: 352 KEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
C++ + + A ++L+++ +N G ++++N+Y + WD+V + R + + +T
Sbjct: 412 QCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQT 471
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PG S +E+ + H+F S D++HP+ +EIY L M
Sbjct: 472 PGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQM 506
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/515 (34%), Positives = 263/515 (51%), Gaps = 51/515 (9%)
Query: 16 VLAILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTL--KLSNLTYARFIFD 70
+L IL + L+ Q+ S T G ++ L F +L K + +F
Sbjct: 224 LLDILPAVAELQELRLGMQIHSLATKTGCYSHDYV---LTGFISLYSKCGKIKMGSALFR 280
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
P+ Y AMI Y S + SL+++++ G + + V S +L
Sbjct: 281 EFRKPDIVAYNAMIHGYTSN-GETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML-- 337
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
+H +KS F + V TAL YS+
Sbjct: 338 --IYAIHGYCLKSNFLSHASVSTALTTVYSK----------------------------- 366
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
+ +I++A LFD P++ +P+WN++I+G TQNGL DAIS FR M PN
Sbjct: 367 ---LNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ---KSEFSPNP 420
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
VT+ C LSA G L LGK +H V + ++S ALI MY KCGS+ EARR FD
Sbjct: 421 VTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDL 480
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
+KK +WN+MI+ + LHGQ + ++ +F EM+ + I P VTF+ +L AC+H GLV
Sbjct: 481 MTKKNEVTWNTMISGYGLHGQGQEALNIFYEML---NSGITPTPVTFLCVLYACSHAGLV 537
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
++G F M Y EP ++HY C+VD+LGRAG + AL+ ++ M IEP VW +LL
Sbjct: 538 KEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLG 597
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
C+I+ T+ A +KL E+DP+N GY ++L+NI+ + + VR+ K R K
Sbjct: 598 ACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKA 657
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PG + IE+ + H F S D++HP+ +EIY+ LE +
Sbjct: 658 PGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKL 692
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 169/373 (45%), Gaps = 44/373 (11%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + +T L+ MI+ Y + S ++RD++ + + +L +
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVES-IQVFRDLINESCTRLDTTTLLDILPAV 231
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
++ E R +H+ K+G + V T ++ YS+ G I + LF E ++V++
Sbjct: 232 AELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK-IKMGSALFREFRKPDIVAY 290
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
AMI GYT G+ + + SLF + +++G
Sbjct: 291 NAMIHGYTSNGETELSLSLFKEL----------MLSGA---------------------- 318
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
R TLV + GH L L IHGY ++ + +S AL +Y K ++ A
Sbjct: 319 --RLRSSTLVSLVPVSGH---LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R+ FD + +K L SWN+MI+ + +G +E++I +F EM Q P+ VT +L+AC
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM---QKSEFSPNPVTITCILSAC 430
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
G + G+ L+ T E I L+ + + G EA + M + +EV
Sbjct: 431 AQLGALSLGKWVHDLVRST-DFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEVT 488
Query: 425 WGSLLNGCKIYGR 437
W ++++G ++G+
Sbjct: 489 WNTMISGYGLHGQ 501
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 106/508 (20%), Positives = 202/508 (39%), Gaps = 84/508 (16%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFK----LVRFCTLKLSNLT---YARFIF 69
L +R I+HL Q +Q + F+ L+ T +LS+L YAR IF
Sbjct: 24 LDFFKRSTSISHLAQ--------THAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIF 75
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
+ P+ +L+ ++ ++ + SS S++ + + +PN Y + + +
Sbjct: 76 LSVQRPDVFLFNVLMRGFSVNESPHSS-LSVFAHLRKSTDLKPNSSTYAFAISAASGFRD 134
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
R +++H Q V G + ++ + +V Y + + ARK+FD M +++ + W MIS
Sbjct: 135 DRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWR-VEDARKVFDRMPEKDTILWNTMIS 193
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GY + N ++ ++I FR + E R +
Sbjct: 194 GYRK-------------------------------NEMYVESIQVFRDLINE--SCTRLD 220
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
TL+ L A+ L+LG IH + G ++ I +Y KCG +K F
Sbjct: 221 TTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFR 280
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
K + ++N+MI+ + +G++E S+ +F+E+M R T +SL+ H L
Sbjct: 281 EFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS---GARLRSSTLVSLVPVSGHLML 337
Query: 370 VEQGRAYF------------KLMTKTYRIEPQIE---------------HYGCLVDLLGR 402
+ Y +T Y +IE + ++ +
Sbjct: 338 IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 403 AGRFEEALEVVKGMK---IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGY- 458
G E+A+ + + M+ P+ V +L+ C G ++ + D + Y
Sbjct: 398 NGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYV 457
Query: 459 GIMLANIYGELGKWDEVRKVRKMLKDRN 486
L +Y + G E R++ ++ +N
Sbjct: 458 STALIGMYAKCGSIAEARRLFDLMTKKN 485
>gi|296084034|emb|CBI24422.3| unnamed protein product [Vitis vinifera]
Length = 502
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/418 (39%), Positives = 242/418 (57%), Gaps = 26/418 (6%)
Query: 111 QPNQFIYPHVLKSCPDV-LES-RGTKMVHTQIVKSGFEQYPV-VETALVNSYSRSGNDIG 167
+PN + +L +C D LE R +H + K G + V V TALV+ YS+ G +
Sbjct: 86 RPNHITFLTLLSACTDFPLEGLRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQ-LD 144
Query: 168 IARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGL 227
+A +FDEM RN VSW MI G R G++ A LFD M +RD +W S+I G + G
Sbjct: 145 LAWLMFDEMHVRNSVSWNTMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGC 204
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
F A+ +FR M + + P+ VT++ L+A + G L LG I+ +V + + I
Sbjct: 205 FEQALEWFREMQLA---GVEPDYVTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKI 261
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
SN+LIDMY +CG ++ AR+ F++ K+ L SWNSMI FAL+G +E
Sbjct: 262 SNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVGFALNGHAE-------------- 307
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE 407
+ + F +L+ H GLV++G +F +M +T +I P+IEHYGCLVDL RAGR E
Sbjct: 308 -----EALEFFNLMRKEGHSGLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLE 362
Query: 408 EALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYG 467
+AL V+ M ++P+EVV GSLL C+ +G AE +K L E+DP + ++L+NIY
Sbjct: 363 DALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYA 422
Query: 468 ELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+G+WD KVRK +K +K PG S IE+D +H+F + DKTH T+ IY L+ +
Sbjct: 423 AVGRWDGASKVRKKMKALGIHKKPGFSSIEMDGSIHEFVAGDKTHVETQNIYAMLDHL 480
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 117/265 (44%), Gaps = 36/265 (13%)
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM-- 265
P + +W S IA +NG +A + F RM + +RPN +T + LSA +
Sbjct: 50 PIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIA---GVRPNHITFLTLLSACTDFPLEG 106
Query: 266 LQLGKVIHGYVYRNGLDLDS-FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
L+ G IH YV + GLD ++ + AL+DMY KCG L A FD + SWN+MI+
Sbjct: 107 LRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMID 166
Query: 325 SFALHGQSENSICVFEEM----------------------------MRCQDHNIRPDGVT 356
+G+ +I +F++M Q + PD VT
Sbjct: 167 GCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVT 226
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
IS+L AC + G + G + + K + I+ L+D+ R G A +V + M
Sbjct: 227 IISVLAACANLGALGLGLWINRFVMKQ-DFKDNIKISNSLIDMYSRCGCIRLARQVFEQM 285
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFA 441
+ V W S++ G + G + A
Sbjct: 286 P-KRSLVSWNSMIVGFALNGHAEEA 309
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 6/139 (4%)
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL--VEQG 373
+ SW S S ALH ++ E R Q +RP+ +TF++LL+ACT L + G
Sbjct: 54 IVSWTS---SIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFG 110
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
+ + K + LVD+ + G+ + A + M + + V W ++++GC
Sbjct: 111 GSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVR-NSVSWNTMIDGCM 169
Query: 434 IYGRTDFAEFAVKKLIEID 452
G A ++ E D
Sbjct: 170 RNGEVGEAIVLFDQMSERD 188
>gi|147811906|emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]
Length = 633
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/514 (33%), Positives = 282/514 (54%), Gaps = 52/514 (10%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTT 74
+L+ L++ + + ++Q Q +T G F K++ F +L L +L YA+ IF+ T
Sbjct: 9 LLSKLQQLSSVKEVEQTQCLITKSGLFNHPFVISKIISFLSLSPLGSLVYAQAIFEDTTM 68
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL-----E 129
N ++ MI AYA + A LY + + R + + F+YP LK+C VL +
Sbjct: 69 DNPFVCNTMIRAYA-KSVFPIKAIYLY-NFMHRKDIKSDHFMYPFGLKACARVLWCNEGD 126
Query: 130 SRGTKM--------VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR-- 179
+ T++ +H ++ + G +Q ++ +LV YS+ G + +AR++FDEM+++
Sbjct: 127 IKCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLYSQCGF-LDLARRVFDEMTEKTI 185
Query: 180 -----------------------------NVVSWTAMISGYTRVGDIKNAASLFDSMPDR 210
NVVSW +I+ Y R+G I++A ++F MP+R
Sbjct: 186 TSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNMLIARYIRLGKIEDAKAVFQEMPER 245
Query: 211 DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK 270
D +WNS+IAG Q ++ A++ FR M + N+ +TL+ L A TG L++G+
Sbjct: 246 DAVSWNSMIAGYVQIKDYARALALFREMEIA---NVEATDITLISVLGACAETGALEIGR 302
Query: 271 VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG 330
IH + + ++ ++SNAL+DMY KCG L A F K ++ WN+MI S A+HG
Sbjct: 303 KIHLSLKQREYKIEGYLSNALVDMYAKCGHLNLAWEVFSELKMKHISCWNAMIVSLAVHG 362
Query: 331 QSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQI 390
E ++ +F M D RP+ VTFI +L AC+H GLV++GR +F M Y+I P I
Sbjct: 363 YCEEALRLFSTMEMSVD-GARPNRVTFIGVLIACSHKGLVDEGRKFFNRMVNEYKIMPDI 421
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE 450
+HYGC+VDLL R G +EA ++K M E + V+W +LL C+++ D AE + ++L +
Sbjct: 422 KHYGCMVDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLGACRVHHHVDLAEESFQQLGK 481
Query: 451 IDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
++P G ++L+NIY E +W++V + K+L +
Sbjct: 482 MEPLRDGDYVLLSNIYAEAQRWNDVERASKILAN 515
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 155/385 (40%), Gaps = 85/385 (22%)
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSG-NDIGIARKLFDEM 176
P +L + + + I KSG +P V + +++ S S + A+ +F++
Sbjct: 7 PDLLSKLQQLSSVKEVEQTQCLITKSGLFNHPFVISKIISFLSLSPLGSLVYAQAIFEDT 66
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+ N MI Y + A L++ M +D+ + + ++ +
Sbjct: 67 TMDNPFVCNTMIRAYAKSVFPIKAIYLYNFMHRKDIK---------SDHFMYPFGLKACA 117
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
R+ +I+ Q+ + C G IH ++R GLD D FI N+L+ +Y
Sbjct: 118 RVLWCNEGDIKCTQLDIACK------------GAEIHCRLFRLGLDQDCFIQNSLVYLYS 165
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINS------------------------------- 325
+CG L ARR FD ++K +TSWN MI++
Sbjct: 166 QCGFLDLARRVFDEMTEKTITSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNMLIAR 225
Query: 326 FALHGQSENSICVFEEM---------------MRCQDH-------------NIRPDGVTF 357
+ G+ E++ VF+EM ++ +D+ N+ +T
Sbjct: 226 YIRLGKIEDAKAVFQEMPERDAVSWNSMIAGYVQIKDYARALALFREMEIANVEATDITL 285
Query: 358 ISLLNACTHGGLVEQGRA-YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
IS+L AC G +E GR + L + Y+IE + + LVD+ + G A EV +
Sbjct: 286 ISVLGACAETGALEIGRKIHLSLKQREYKIEGYLSN--ALVDMYAKCGHLNLAWEVFSEL 343
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFA 441
K++ W +++ ++G + A
Sbjct: 344 KMKHIS-CWNAMIVSLAVHGYCEEA 367
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/470 (34%), Positives = 267/470 (56%), Gaps = 43/470 (9%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM-VRRGQPQPNQFI---- 116
L AR +FD + N +T+MI Y +A A SL++D+ + F+
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGY-DLNGNALDAVSLFKDLLIEENDDDATMFLDSMG 185
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGND-IGIARKLFDE 175
V+ +C V T+ +H+ ++K GF++ V L+++Y++ G + +ARK+
Sbjct: 186 MVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKI--- 242
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
FD + D+D ++NS+++ Q+G+ ++A F
Sbjct: 243 ----------------------------FDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVF 274
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
RR+ E + N +TL L A+ H+G L++GK IH V R GL+ D + ++IDMY
Sbjct: 275 RRLIKE--KVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMY 332
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCG ++ AR AFDR K + SW +MI + +HG + ++ +F M+ D +RP+ +
Sbjct: 333 CKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI---DSGVRPNYI 389
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF+S+L AC+H GL + G +F M + +EP +EHYGC+VDLLGRAG ++A ++++
Sbjct: 390 TFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQK 449
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
MK+EPD ++W SLL C+I+ + AE +V +L E+DP+N GY ++L++IY + G+W +V
Sbjct: 450 MKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDV 509
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+VR +K+R K PG S +E++ +VH F D+ HP+ E+IY+ L +
Sbjct: 510 ERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAEL 559
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 160/353 (45%), Gaps = 39/353 (11%)
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
A + A A AFS R + P + +P +K+C +L+ K H Q G+
Sbjct: 52 ARSGDSAEALRAFSSMRKL----SLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGY 107
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
+ V +AL+ YS G + ARK+FDE+ RN+VSWT+MI GY G+ +A SLF
Sbjct: 108 QSDIFVSSALIVMYSTCGK-LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFK 166
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
+ + DA F MGM V+++ A S + G
Sbjct: 167 DLLIEEND---------------DDATMFLDSMGM----------VSVISACSRVAAKG- 200
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS--LKEARRAFDRNSKKRLTSWNSMI 323
L + IH +V + G D + N L+D Y K G + AR+ FD+ K S+NS++
Sbjct: 201 --LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIM 258
Query: 324 NSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT 383
+ +A G S + VF +++ + + + +T ++L A +H G + G+ + +
Sbjct: 259 SVYAQSGMSNEAFDVFRRLIK--EKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 384 YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
+E + ++D+ + GR E A MK + W +++ G ++G
Sbjct: 317 -GLEDDVIVGTSIIDMYCKCGRVETARLAFDRMK-NKNVRSWTAMIAGYGMHG 367
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 95/172 (55%), Gaps = 7/172 (4%)
Query: 198 KNAASLFDSMPDR-DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
+N +LF+ D+ DV +WNSVIA ++G ++A+ F M ++ P + + CA
Sbjct: 26 QNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMR---KLSLYPTRSSFPCA 82
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
+ A + GK H + G D F+S+ALI MY CG L++AR+ FD K+ +
Sbjct: 83 IKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 317 TSWNSMINSFALHGQSENSICVFEEMM---RCQDHNIRPDGVTFISLLNACT 365
SW SMI + L+G + +++ +F++++ D + D + +S+++AC+
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACS 194
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/469 (35%), Positives = 255/469 (54%), Gaps = 17/469 (3%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + L AR IFD + + + MI+ YA Q A L+ + R +
Sbjct: 134 VKRNRLVDARGIFDRMPERDEVSWNTMISGYA-QNGELLEAQRLFEESPVRDVFTWTAMV 192
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+V D E+R ++ E+ V A++ Y + + AR+LF+ M
Sbjct: 193 SGYVQNGMLD--EAR-------RVFDGMPEKNSVSWNAIIAGYVQC-KRMDQARELFEAM 242
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+NV SW MI+GY + GDI A + FD MP RD +W ++IAG Q+G +A+ F
Sbjct: 243 PCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFV 302
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M D R N+ T LS L+LGK +HG V + GL+ ++ NAL+ MY
Sbjct: 303 EMK---RDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYC 359
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG++ +A F+ +K + SWN+MI +A HG + ++ +FE M + I PD VT
Sbjct: 360 KCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKT---GILPDDVT 416
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+ +L+AC+H GLV++G YF MT+ Y I +HY C++DLLGRAGR ++A ++K M
Sbjct: 417 MVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNM 476
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
EPD WG+LL +I+G T+ E A K + E++P+N G ++L+N+Y G+W +V
Sbjct: 477 PFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVG 536
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
++R ++DR K PG SW+EV ++H F D HP + IY LE +
Sbjct: 537 RMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEEL 585
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 154/346 (44%), Gaps = 46/346 (13%)
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
AR LFD+M +R+VVSW AM+SGY + G +K A +FD MP ++ +WN ++A QNG
Sbjct: 49 ARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRI 108
Query: 229 SDAISFFRR------------MGMEVSDN------------IRPNQVTLVCALSAIGHTG 264
DA F MG V N ++V+ +S G
Sbjct: 109 EDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNG 168
Query: 265 -MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMI 323
+L+ ++ R D F A++ Y + G L EARR FD +K SWN++I
Sbjct: 169 ELLEAQRLFEESPVR-----DVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAII 223
Query: 324 NSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT 383
+ + + + +F E M CQ+ + ++ +++ G + Q R +F M +
Sbjct: 224 AGYVQCKRMDQARELF-EAMPCQNVS------SWNTMITGYAQNGDIAQARNFFDRMPQR 276
Query: 384 YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV---VWGSLLNGCKIYGRTDF 440
I + ++ ++G EEAL + MK + + + + S L+ C +
Sbjct: 277 DSIS-----WAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALEL 331
Query: 441 AEFAVKKLIEIDPNNGGY-GIMLANIYGELGKWDEVRKVRKMLKDR 485
+ ++++ +G Y G L +Y + G D+ V + ++++
Sbjct: 332 GKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEK 377
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 116/244 (47%), Gaps = 24/244 (9%)
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
+ G R +++ A LFD MP+RDV +WN++++G QNG +A F M +
Sbjct: 37 LRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK------ 90
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
N ++ L+A G ++ + + + + D + N ++ Y K L +AR
Sbjct: 91 -NSISWNGMLAAYVQNGRIEDARRL----FESKADWELISWNCMMGGYVKRNRLVDARGI 145
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FDR ++ SWN+MI+ +A +G+ + +FEE +R D T+ ++++
Sbjct: 146 FDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE------SPVR-DVFTWTAMVSGYVQN 198
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
G++++ R F M + + + ++ + R ++A E+ + M + + W +
Sbjct: 199 GMLDEARRVFDGMPEKNSVS-----WNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNT 252
Query: 428 LLNG 431
++ G
Sbjct: 253 MITG 256
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/515 (33%), Positives = 272/515 (52%), Gaps = 41/515 (7%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
Q LA+L+ CN + L Q+ + + LG K +L + A F+F
Sbjct: 30 QNCLALLQACNALPKLTQIHTHILKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAEA 89
Query: 74 TPNTY---LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
Y L+ +I AYA A +LY M+ PN+F YP VLK+C +
Sbjct: 90 DTRLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAI-LPNKFTYPFVLKACAGLEVL 148
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
+ VH +VK GF+ V+ +V+ YS I ARK+F
Sbjct: 149 NLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVF----------------- 191
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
D MP D W+++I G + G ++A++ FR M M + P++
Sbjct: 192 --------------DEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMA---EVCPDE 234
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
+T+V LSA G L+LGK I Y+ R+ + +SNALIDM+ KCG + +A + F
Sbjct: 235 ITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRA 294
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
++K + SW S+I A+HG+ + + C+FEEM + PD V FI LL+AC+H GLV
Sbjct: 295 MNEKTIVSWTSVIVGMAMHGRGQEATCLFEEM---TSSGVAPDDVAFIGLLSACSHSGLV 351
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
E+GR YF M K Y++ P+IEHYGC+VD+ R G +EALE V+ M IEP+ V+ +L++
Sbjct: 352 ERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVS 411
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
C+ +G E K L++ +P + ++L+NIY + W++ K+R++++ + K
Sbjct: 412 ACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKV 471
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PG + IE+D ++++F + DK+H + +EIY+ ++ M
Sbjct: 472 PGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEM 506
>gi|359489007|ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 663
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/500 (34%), Positives = 275/500 (55%), Gaps = 16/500 (3%)
Query: 4 VTNQLNQTL--NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN 61
++N++ L +Q + ++ E C + LK + + K+ RF + +
Sbjct: 171 ISNKVMHMLPTSQSLASMAEACLTMQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNG 230
Query: 62 -LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
L YA +F + PNT+ Y +I Y+ + S + L+ M RR P+ F + +
Sbjct: 231 CLHYADRLFSQIHQPNTFFYNTLIRGYSKS-SSPSQSVQLFNQM-RRNCVDPDGFTFTFL 288
Query: 121 LKSCP----DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
LK D+ + +H ++K GF + V AL++ Y+ G A ++F+EM
Sbjct: 289 LKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAA-AHQVFNEM 347
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+VVSW+ ++ + R G+++ A +F MP+RDV +W +++G Q +A+ FR
Sbjct: 348 VGADVVSWSGLVVAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFR 407
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M +RP++V +V +SA G L+ G +H Y+ NG + NALIDMY
Sbjct: 408 EMR---DVGVRPDEVAMVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYA 464
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG + A + F+ +K L +WNSMI++ A HG +E++ VF M+ IRPDGVT
Sbjct: 465 KCGCMDLAWQVFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLY---SGIRPDGVT 521
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
F++LL A TH G V+ G F+ M + Y +E +EHYGC+VD+LGRAGR EEA +++ M
Sbjct: 522 FLALLTAYTHKGWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSM 581
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
+ ++VVWG+LL C+IYG + E +KKLIE+ P+ GGY I+L +IY G+ E
Sbjct: 582 SMPCNDVVWGALLAACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAI 641
Query: 477 KVRKMLKDRNAYKTPGCSWI 496
++R+ + A KT GCSW+
Sbjct: 642 ELRRAMDVNGAKKTLGCSWV 661
>gi|297804490|ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
gi|297315965|gb|EFH46388.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
Length = 853
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 166/494 (33%), Positives = 258/494 (52%), Gaps = 73/494 (14%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F + NT + +++ + P+ A L+ ++ P+P+ F Y +++ SC
Sbjct: 83 VFHGMRAKNTVSWNSLLVGISKDPSRMMEAHQLFDEI-----PEPDTFSY-NIMLSC--- 133
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETA----LVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
+ + + +S F + P + A ++ Y+R G ++ AR LF M ++N VS
Sbjct: 134 ----YVRNGNFEKAQSFFNRMPFKDAASWNTMITGYARRG-EMEKARVLFYSMMEKNEVS 188
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAW---------------------------- 215
W AMISGY GD++ AA F + P R V AW
Sbjct: 189 WNAMISGYIECGDLEKAAHFFKAAPFRGVVAWTAMITGYMKAKKVELAEAMFKDMTVKKN 248
Query: 216 ----NSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKV 271
N++I+G +N D + FR M + + IRPN L AL L LG+
Sbjct: 249 LVTWNAMISGYVENSRPEDGLKLFRAM---LEEGIRPNSSGLSSALLGCSELSALCLGRQ 305
Query: 272 IHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
IH V MY KCG L +A + F+ KK + +WN+MI+ +A HG
Sbjct: 306 IHQIV-----------------MYCKCGELGDAWKLFEAMKKKDVVAWNAMISGYAQHGN 348
Query: 332 SENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE 391
+E ++C+F EM +D +PD +TF+++L AC H GLV+ G YF M + YR+EP+ +
Sbjct: 349 AEKALCLFHEM---RDSKTKPDWITFVAVLLACNHAGLVDIGMTYFDSMVRDYRVEPRPD 405
Query: 392 HYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
HY C+VDLLGRAG+ EEAL++++ M P V+G+LL C+++ + AEFA +KL+E+
Sbjct: 406 HYTCMVDLLGRAGKVEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLEL 465
Query: 452 DPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKT 511
DP N + LANIY W++V +VRK +K+ N K PG SWIE+ ++H F S D+
Sbjct: 466 DPRNAAGYVQLANIYASKNLWEDVARVRKRMKESNVVKVPGYSWIEIRNKIHHFRSSDRI 525
Query: 512 HPRTEEIYDALESM 525
HP + I+ L+ +
Sbjct: 526 HPELDSIHKKLKEL 539
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 150/476 (31%), Positives = 273/476 (57%), Gaps = 13/476 (2%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRR-----GQPQP 112
+ ++L AR +F+ + + + ++I+ Y + + + A +Y ++ Q +P
Sbjct: 162 RFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN-GYWNEALEIYYQSIKLFMEMVNQFKP 220
Query: 113 NQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKL 172
+ +L++C + + K VH ++ SG+E L+N Y++ GN + ++++
Sbjct: 221 DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLA-SQEV 279
Query: 173 FDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAI 232
F M ++ VSW +MI+ Y + G + ++ +F++M RD+ WN++IA C + + +
Sbjct: 280 FSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGL 339
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALI 292
RM E + P+ T++ L + GK IHG +++ GL+ D + N LI
Sbjct: 340 RMISRMRTE---GVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLI 396
Query: 293 DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
+MY KCGSL+ + + F K + +W ++I++ ++G+ + ++ F EM + I P
Sbjct: 397 EMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEM---EAAGIVP 453
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
D V F++++ AC+H GLVE+G YF M K Y+IEP+IEHY C+VDLL R+ ++A +
Sbjct: 454 DHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDF 513
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKW 472
+ M ++PD +WG+LL+ C++ G T+ AE +++IE++P++ GY ++++NIY LGKW
Sbjct: 514 ILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKW 573
Query: 473 DEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
D+VR +RK +K R K PGCSW+E+ +V+ F + K + EE+ L + L
Sbjct: 574 DQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGL 629
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 213/459 (46%), Gaps = 67/459 (14%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLV-RFCTLKLSNLTYARFI 68
QTL + L L +L S + TLG + ++ KL+ ++ + +++ F
Sbjct: 13 QTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF- 71
Query: 69 FDHLTTP--NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPD 126
L +P N YL+ ++I A + S A SLY + +R + QP+ + +P V+ +C
Sbjct: 72 --RLASPSNNVYLWNSIIRAL-THNGLFSEALSLYSE-TQRIRLQPDTYTFPSVINACAG 127
Query: 127 VLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
+L+ K +H +++ GF + AL++ Y R ND+ ARK+F+EM R+VVSW +
Sbjct: 128 LLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRF-NDLDKARKVFEEMPLRDVVSWNS 186
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
+ISGY G WN + ++ +I F ME+ +
Sbjct: 187 LISGYNANG------------------YWNEALE------IYYQSIKLF----MEMVNQF 218
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
+P+ +T+ L A GH G L+ GK +H Y+ +G + D+ SN LI+MY KCG+L ++
Sbjct: 219 KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQE 278
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM----------------------- 343
F K SWNSMIN + +G+ +S+ VFE M
Sbjct: 279 VFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLG 338
Query: 344 -----RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVD 398
R + + PD T +S+L C+ QG+ + K +E + L++
Sbjct: 339 LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFK-LGLESDVPVGNVLIE 397
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
+ + G + +V K MK + D V W +L++ C +YG
Sbjct: 398 MYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMYGE 435
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 138/349 (39%), Positives = 216/349 (61%), Gaps = 6/349 (1%)
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
D +V +++I Y + + ++ +F +P D +WNS+IAGC QNG+F + + FF++
Sbjct: 268 DADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQ 327
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M + I+PN V+ + A H L LGK +HGY+ R+ D + FI++AL+DMY K
Sbjct: 328 MLIA---KIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAK 384
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG+++ AR FD+ + SW +MI +ALHG + ++I +F+ M + ++P+ V F
Sbjct: 385 CGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM---EVEGVKPNYVAF 441
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+++L AC+H GLV++ YF MT+ YRI P +EHY + DLLGR GR EEA E + M
Sbjct: 442 MAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMH 501
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
IEP VW +LL C+++ + AE KKL +DP N G ++L+NIY G+W + RK
Sbjct: 502 IEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARK 561
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+R ++D+ K P CSWIE+ +VH F + DK+HP + I +AL+ ++
Sbjct: 562 LRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLL 610
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 203/402 (50%), Gaps = 23/402 (5%)
Query: 67 FIFDHLTTPNTYL-YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
IF+ L +P T L + ++I Y S S S + M+ G+ P+ ++P VLKSC
Sbjct: 60 LIFNSLPSPPTTLAWKSIIRCYTSHGLFLHS-LSFFIQMLASGK-YPDHNVFPSVLKSCT 117
Query: 126 DVLESRGTKMVHTQIVK--SGFEQYPVVETALVNSYSR--SGNDIGIARKLFDEMSDRNV 181
+ + R + VH I++ GF+ Y AL+N YS+ S ++ +K+FDE +V
Sbjct: 118 LMKDLRFGESVHGCIIRLGMGFDLYTC--NALMNMYSKFWSLEEVNTYKKVFDEGKTSDV 175
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
S S Y +G ++ +F+ MP RD+ +WN+VI+G QNG+ DA+ R MG
Sbjct: 176 YSKKEKESYY--LGSLRK---VFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMG-- 228
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+ ++RP+ TL L L GK IHGY RNG D D FI ++LIDMY KC +
Sbjct: 229 -NADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRV 287
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
++ R F + SWNS+I +G + + F++M+ + I+P+ V+F S++
Sbjct: 288 DDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAK---IKPNHVSFSSIM 344
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
AC H + G+ + ++ R + + LVD+ + G A + M++ D
Sbjct: 345 PACAHLTTLHLGKQLHGYIIRS-RFDGNVFIASALVDMYAKCGNIRTARWIFDKMELY-D 402
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLA 463
V W +++ G ++G + ++ K +E++ Y +A
Sbjct: 403 MVSWTAMIMGYALHGHA-YDAISLFKRMEVEGVKPNYVAFMA 443
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 165/474 (34%), Positives = 250/474 (52%), Gaps = 27/474 (5%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + L AR +FD + + + MI+ YA Q S A L+ + R +
Sbjct: 199 VKRNMLGDARQLFDQIPVRDLISWNTMISGYA-QDGDLSQARRLFEESPVRDVFTWTAMV 257
Query: 117 YPHVLKSCPDVLESRGTKMVHTQ-----IVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
Y +V D +M + ++ +G+ QY ++ + R+
Sbjct: 258 YAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMD---------------MGRE 302
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
LF+EM N+ SW MISGY + GD+ A +LFD MP RD +W ++IAG QNGL+ +A
Sbjct: 303 LFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEA 362
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
++ M D N+ T CALSA L+LGK +HG V R G + + NAL
Sbjct: 363 MNMLVEMK---RDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNAL 419
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIR 351
+ MY KCG + EA F K + SWN+M+ +A HG ++ VFE M+ ++
Sbjct: 420 VGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITA---GVK 476
Query: 352 PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALE 411
PD +T + +L+AC+H GL ++G YF M K Y I P +HY C++DLLGRAG EEA
Sbjct: 477 PDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQN 536
Query: 412 VVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGK 471
+++ M EPD WG+LL +I+G + E A + + +++P+N G ++L+N+Y G+
Sbjct: 537 LIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGR 596
Query: 472 WDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
W +V K+R ++ KTPG SW+EV ++H F D HP IY LE +
Sbjct: 597 WVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEEL 650
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 157/326 (48%), Gaps = 32/326 (9%)
Query: 110 PQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP----VVETALVNSYSRSGND 165
P+P+ F PH +K + S + H + F+ P V A+++ Y R+
Sbjct: 24 PKPH-FEDPHTVKCTKAI--STHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAK- 79
Query: 166 IGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQN 225
+AR LFD+M +++ SW M++GY R +++A LFDSMP++DV +WN++++G ++
Sbjct: 80 FSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRS 139
Query: 226 GLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
G +A F RM + N ++ L+A +G L+ + + + + D +
Sbjct: 140 GHVDEARDVFDRMPHK-------NSISWNGLLAAYVRSGRLEEARRL----FESKSDWEL 188
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
N L+ Y K L +AR+ FD+ + L SWN+MI+ +A G + +FEE
Sbjct: 189 ISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEE---- 244
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
+R D T+ +++ A G++++ R F M + + Y ++ + R
Sbjct: 245 --SPVR-DVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMS-----YNVMIAGYAQYKR 296
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNG 431
+ E+ + M P+ W +++G
Sbjct: 297 MDMGRELFEEMPF-PNIGSWNIMISG 321
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 181/417 (43%), Gaps = 42/417 (10%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + N+ Y AMI+ Y ++ FSL RD+ + P + F + +L
Sbjct: 55 VFDAMPLRNSVSYNAMISGYLR-----NAKFSLARDLFDK-MPHKDLFSWNLMLTGYARN 108
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
R +M + S E+ V A+++ Y RSG+ + AR +FD M +N +SW +
Sbjct: 109 RRLRDARM----LFDSMPEKDVVSWNAMLSGYVRSGH-VDEARDVFDRMPHKNSISWNGL 163
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
++ Y R G ++ A LF+S D ++ + N ++ G + + DA F + + V D I
Sbjct: 164 LAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQ--IPVRDLIS 221
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
N + +S G L + + + D F A++ Y + G L EARR
Sbjct: 222 WNTM-----ISGYAQDGDLSQARRL----FEESPVRDVFTWTAMVYAYVQDGMLDEARRV 272
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FD +KR S+N MI +A + + + +FEEM P+ ++ +++
Sbjct: 273 FDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEM-------PFPNIGSWNIMISGYCQN 325
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
G + Q R F +M + + + ++ + G +EEA+ ++ MK + + + +
Sbjct: 326 GDLAQARNLFDMMPQRDSVS-----WAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRST 380
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGY------GIMLANIYGELGKWDEVRKV 478
C + D A + K + GY G L +Y + G DE V
Sbjct: 381 FC--CALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDV 435
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 178/419 (42%), Gaps = 59/419 (14%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
L+ + + AR +FD + + + + M+T YA + A L+ M + N +
Sbjct: 75 LRNAKFSLARDLFDKMPHKDLFSWNLMLTGYA-RNRRLRDARMLFDSMPEKDVVSWNAML 133
Query: 117 YPHVLKSCPDVLESRGTKMVH----------TQIVKSG--------FEQYPVVE----TA 154
+V D +M H V+SG FE E
Sbjct: 134 SGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNC 193
Query: 155 LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA 214
L+ Y + N +G AR+LFD++ R+++SW MISGY + GD+ A LF+ P RDV
Sbjct: 194 LMGGYVKR-NMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFT 252
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGM--EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVI 272
W +++ Q+G+ +A F M E+S N+ G Q ++
Sbjct: 253 WTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMI--------------AGYAQYKRMD 298
Query: 273 HGYVYRNGLDLDSFIS-NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
G + + S N +I Y + G L +AR FD ++ SW ++I +A +G
Sbjct: 299 MGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGL 358
Query: 332 SENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE 391
E ++ + EM R + R TF L+AC +E G+ + +T +
Sbjct: 359 YEEAMNMLVEMKRDGESLNRS---TFCCALSACADIAALELGKQVHGQVVRTGYEK---- 411
Query: 392 HYGCLVD--LLG---RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
GCLV L+G + G +EA +V +G++ D V W ++L G Y R F A+
Sbjct: 412 --GCLVGNALVGMYCKCGCIDEAYDVFQGVQ-HKDIVSWNTMLAG---YARHGFGRQAL 464
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/489 (34%), Positives = 267/489 (54%), Gaps = 12/489 (2%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
+ + + +L +L L+++ + G +Q N V C L+ + YA IF
Sbjct: 6 REIERNILRLLHGRETRTQLREIHAHFLRHGLNQLNQILSHFVSICG-SLNKMAYANRIF 64
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
P L+ AMI Y+ S F L+ M RG P+++ +LK+C +
Sbjct: 65 KQTQNPTIILFNAMIKGYSLNGPFEES-FRLFSSMKNRG-IWPDEYTLAPLLKACSSLGV 122
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
+ K +H +++ GFE + + ++ YS G + A K+FDEM R+V+ W MI
Sbjct: 123 LQLGKCMHKEVLVVGFEGFSAIRIGVIELYSSCGV-MEDAEKVFDEMYQRDVIVWNLMIH 181
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
G+ + GD+ LF M R V +WN +I+ Q+ S+A+ F M + +P+
Sbjct: 182 GFCKRGDVDMGLCLFRQMRKRSVVSWNIMISCLAQSRRDSEALGLFHDM---LDWGFKPD 238
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSF-ISNALIDMYGKCGSLKEARRAF 308
+ T+V L G + +GK IH Y +GL D + NAL+D Y K G + ARR F
Sbjct: 239 EATVVTVLPICARLGSVDVGKWIHSYAKSSGLYRDFVAVGNALVDFYNKSGMFETARRVF 298
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
D +K + SWN++I+ AL+G E + + EEMM + +RP+ TF+ +L+ C H G
Sbjct: 299 DEMPRKNVISWNTLISGLALNGNGELGVELLEEMM---NEGVRPNDATFVGVLSCCAHAG 355
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI-EPDEVVWGS 427
L E+GR M + ++IEP++EHYGC+VDLLGR+G EA ++++ M P+ +WGS
Sbjct: 356 LFERGRELLASMVEHHQIEPKLEHYGCMVDLLGRSGCVREAYDLIRIMPGGAPNAALWGS 415
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LL+ C+ +G + A AVK+LI+++P N G ++L+N+Y E +WD+V VR M++++N
Sbjct: 416 LLSACRTHGDVELAHLAVKELIDLEPWNSGNYVLLSNMYAEEERWDKVANVRGMMREKNV 475
Query: 488 YKTPGCSWI 496
KTPG S I
Sbjct: 476 KKTPGQSVI 484
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 163/448 (36%), Positives = 257/448 (57%), Gaps = 24/448 (5%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K NL AR FD + + + AM++ YA Q L+ DM+ G QP++ +
Sbjct: 212 KKGNLKTARMYFDKMPERSVVSWNAMLSGYA-QGGAPEETIRLFNDMLSPGNVQPDETTW 270
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKS-----GFEQYPVVETALVNSYSRSGNDIGIARKL 172
V+ SC S G + IV+ GF V+TAL++ +++ GN + A K+
Sbjct: 271 VTVISSC----SSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGN-LEAAHKI 325
Query: 173 FDEMSD---RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
F+++ R+ V W AMIS Y RVGD+ +A LFD MP RD +WNS+IAG TQNG
Sbjct: 326 FEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESV 385
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
AI F M S++ +P++VT+V SA GH G L LG + N + + + N
Sbjct: 386 KAIKLFEEM--ISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYN 443
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
+LI MY +CGS+++A F + + L S+N++I+ FA HG SI E +++ ++
Sbjct: 444 SLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESI---ELLLKMKEDG 500
Query: 350 IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEA 409
I PD +T+I++L AC+H GL+ +G+ F+ + P ++HY C++D+LGRAGR EEA
Sbjct: 501 IEPDRITYIAILTACSHAGLLGEGQRLFESIKF-----PDVDHYACMIDMLGRAGRLEEA 555
Query: 410 LEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGEL 469
+++++ M +EP ++GSLLN I+ + + E A KL +++P+N G ++L+NIY
Sbjct: 556 MKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYASA 615
Query: 470 GKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
G+W + KVR ++ + KT G SW+E
Sbjct: 616 GRWKDGDKVRDTMRKQGVKKTTGLSWLE 643
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 165/515 (32%), Positives = 289/515 (56%), Gaps = 42/515 (8%)
Query: 14 QQVLAILERCNHINHLKQLQS-FLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFD 70
Q+ L +L+RC++I+ KQ+ + F+ ++F A ++ C +++ YA IF
Sbjct: 31 QECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFR 90
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ P T+ + MI Y + + A Y +M++RG +P+ F YP +LK+C +
Sbjct: 91 GIDDPCTFDFNTMIRGYVNVMSF-EEALCFYNEMMQRGN-EPDNFTYPCLLKACTRLKSI 148
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
R K +H Q+ K G E V+ +L+N Y R G ++ ++ +F+++ + SW++M+S
Sbjct: 149 REGKQIHGQVFKLGLEADVFVQNSLINMYGRCG-EMELSSAVFEKLESKTAASWSSMVSA 207
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
R G G++S+ + FR GM N++ +
Sbjct: 208 --RAG-----------------------------MGMWSECLLLFR--GMCSETNLKAEE 234
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
+V AL A +TG L LG IHG++ RN +L+ + +L+DMY KCG L +A F +
Sbjct: 235 SGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQK 294
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
K+ ++++MI+ ALHG+ E+++ +F +M++ + PD V ++S+LNAC+H GLV
Sbjct: 295 MEKRNNLTYSAMISGLALHGEGESALRMFSKMIK---EGLEPDHVVYVSVLNACSHSGLV 351
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
++GR F M K ++EP EHYGCLVDLLGRAG EEALE ++ + IE ++V+W + L+
Sbjct: 352 KEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
C++ + + A ++L+++ +N G ++++N+Y + WD+V + R + + +T
Sbjct: 412 QCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQT 471
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PG S +E+ + H+F S D++HP+ +EIY L M
Sbjct: 472 PGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQM 506
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 155/477 (32%), Positives = 271/477 (56%), Gaps = 9/477 (1%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYA 88
+ + L+ +S+ + + + +K + + AR +FD + + +T M++ Y
Sbjct: 285 MDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYV 344
Query: 89 SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQY 148
Q + + L++ M R P++ VL +C + + + VH IV G
Sbjct: 345 -QGGYYCESLELFQQM-RFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVD 402
Query: 149 PVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP 208
+ AL++ Y++ G + A + F+++ ++ SW +M+ G+ R G + A F+ +P
Sbjct: 403 GFLGNALLDLYAKCGK-LDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIP 461
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
++D+ +WN+++ ++ LF+++ F +M S N++P++ TL+ LS+ G L
Sbjct: 462 EKDIVSWNTMVNAYVKHDLFNESFEIFCKMQ---SSNVKPDKTTLISLLSSCAKVGALNH 518
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
G ++ Y+ +N + +D+ + ALIDMYGKCG ++ A F + +K + W +M+ ++A+
Sbjct: 519 GIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAM 578
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
GQ+ +I ++ EM ++ ++PD VTFI+LL AC+HGGLV++G YF + Y I P
Sbjct: 579 EGQALEAIDLYLEM---EERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIP 635
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL 448
I HYGC+VDLLGR G EE ++ ++ M IEPD +W SL+ C+ + + AE A K+L
Sbjct: 636 TIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQL 695
Query: 449 IEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
IEIDP N G ++L+NIY + G+WD+V KVR L + K PG + IE + VH+F
Sbjct: 696 IEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEF 752
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 193/404 (47%), Gaps = 44/404 (10%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F+ +T + + MI+ Y + + A L+ +M+ G P++ ++ +C +
Sbjct: 190 LFEKMTHRDVISWNTMISCYVLKGMY-REALDLFDEMLVSG-VLPDEITMVSLVSTCAKL 247
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD--EMSDRNVVSWT 185
+ K +H IV + + LV+ YS+ G + A L + S+ +VV WT
Sbjct: 248 KDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGK-MDEAHGLLSRCDESEVDVVLWT 306
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
++SGY + I A LFD M +R + +W ++++G Q G + +++ F++M E N
Sbjct: 307 TLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFE---N 363
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
+ P++V LV LSA H LG+ +H ++ G+ +D F+ NAL+D+Y KCG L EA
Sbjct: 364 VIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEAL 423
Query: 306 RAFDR---------NS----------------------KKRLTSWNSMINSFALHGQSEN 334
R F++ NS +K + SWN+M+N++ H
Sbjct: 424 RTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNE 483
Query: 335 SICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG 394
S +F +M Q N++PD T ISLL++C G + G + + + I
Sbjct: 484 SFEIFCKM---QSSNVKPDKTTLISLLSSCAKVGALNHG-IWVNVYIEKNEIGIDAMLGT 539
Query: 395 CLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
L+D+ G+ G E A E+ + IE + VW +++ + G+
Sbjct: 540 ALIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAMMAAYAMEGQA 582
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 198/470 (42%), Gaps = 76/470 (16%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
++ +L+ C++I + + L T +++ F L ++NL A I + P
Sbjct: 38 IIDLLKSCSNIREFSPIHAHLITANLIHDPEITSQVLAF-LLSVNNLDCAHQILSYSHEP 96
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ ++ ++ + Y MV +G + + ++ +C + +
Sbjct: 97 ESIIWNTLLENKLKEGC-PQEVLECYYHMVTQG-VLLDISTFHFLIHACCKNFDVKLGSE 154
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
VH +I+K GF + + L+ YS+ G + +LF++M+ R+V+SW MIS Y G
Sbjct: 155 VHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVC-QLFEKMTHRDVISWNTMISCYVLKG 213
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
+ A LFD M +++G + P+++T+V
Sbjct: 214 MYREALDLFDEM----------LVSG------------------------VLPDEITMVS 239
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE------------ 303
+S L++GK +H Y+ N L + + N L+DMY KCG + E
Sbjct: 240 LVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESE 299
Query: 304 ---------------------ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM 342
AR+ FD+ +++ L SW +M++ + G S+ +F++M
Sbjct: 300 VDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQM 359
Query: 343 MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGR 402
+ N+ PD V +++L+AC H + GR+ + TY + L+DL +
Sbjct: 360 ---RFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIV-TYGMLVDGFLGNALLDLYAK 415
Query: 403 AGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
G+ +EAL + + + W S+L+G G D A K+ E D
Sbjct: 416 CGKLDEALRTFEQLPCK-SAASWNSMLDGFCRSGGVDKARDFFNKIPEKD 464
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/503 (33%), Positives = 269/503 (53%), Gaps = 40/503 (7%)
Query: 24 NHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL-KLSNLTYARFIFDHLTTPNTYLYTA 82
NH+ KQ+ + + G F LV C L K ++ YA IF + P+++ Y
Sbjct: 9 NHMEEFKQVHAHVLKCGIFFDTFCMSNLVATCALTKWGSMDYACSIFTQIDEPSSFDYNT 68
Query: 83 MITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVK 142
MI + A LY DM+ RG +P++F YP VLK+C + VH + K
Sbjct: 69 MIRGNVND-MKLEEALLLYVDMIERG-VEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFK 126
Query: 143 SGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAAS 202
G E +V+ +L+N Y + G+IKNA
Sbjct: 127 MGLEGDVIVQNSLINMYGKC--------------------------------GEIKNACD 154
Query: 203 LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGH 262
+F+ M ++ V +W+++I ++++ + +M E R + TLV LSA H
Sbjct: 155 VFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMSSE--GRCRVEESTLVNVLSACTH 212
Query: 263 TGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSM 322
G LGK IHG + RN +L+ + +LIDMY K G L++ R F S+K S+ M
Sbjct: 213 LGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCLEKGLRVFKNMSEKNRYSYTVM 272
Query: 323 INSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK 382
I+ A+HG+ + ++ VF EM+ + + PD V ++ + +AC+H GLVE+G FK M
Sbjct: 273 ISGLAIHGRGKEALKVFSEMI---EEGLAPDDVVYVGVFSACSHAGLVEEGLQCFKSMQF 329
Query: 383 TYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAE 442
++IEP ++HYGC+VDLLGR G +EA E++K M I+P++V+W SLL+ CK++ + +
Sbjct: 330 EHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIWRSLLSACKVHHNLEIGK 389
Query: 443 FAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQV 502
A + L ++ NN G ++LAN+Y + KWD+V K+R L +RN +TPG S IE ++V
Sbjct: 390 IAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAERNLVQTPGFSLIEAKRKV 449
Query: 503 HQFHSLDKTHPRTEEIYDALESM 525
++F S DK+ P+ IY+ + M
Sbjct: 450 YKFVSQDKSIPQWNIIYEMIHQM 472
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 79/172 (45%), Gaps = 7/172 (4%)
Query: 262 HTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG--KCGSLKEARRAFDRNSKKRLTSW 319
H ++ K +H +V + G+ D+F + L+ K GS+ A F + + +
Sbjct: 7 HNNHMEEFKQVHAHVLKCGIFFDTFCMSNLVATCALTKWGSMDYACSIFTQIDEPSSFDY 66
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
N+MI + E ++ ++ +M+ + + PD T+ +L AC+ G+V++G
Sbjct: 67 NTMIRGNVNDMKLEEALLLYVDMI---ERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGH 123
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ K +E + L+++ G+ G + A +V GM E W +++
Sbjct: 124 VFKM-GLEGDVIVQNSLINMYGKCGEIKNACDVFNGMD-EKSVASWSAIIGA 173
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 182/565 (32%), Positives = 282/565 (49%), Gaps = 81/565 (14%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT- 74
+L++L++C L+Q+ + T + N + ++ L + TY+ IF H+T
Sbjct: 24 LLSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQ-----SISLKDFTYSTLIFSHITPH 78
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
PN Y + M+ A + LY M + PN F +P V +C ++ E R +
Sbjct: 79 PNDYAFNIMLRATTTTWHDYPLTLHLYHQM-KTLNISPNNFTFPFVFLACANLEEIRMAR 137
Query: 135 MVHTQI-----------VKSGFEQY--------------PVVETALV--NSYSRSGNDIG 167
+ H ++ V S Y + E LV NS +G
Sbjct: 138 LAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLG 197
Query: 168 IARKLF--------------DEMS------------DRNVVSW----------------- 184
AR+ DEMS D + W
Sbjct: 198 FAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIG 257
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+A+IS Y++ G++ ++ +FD MP RD WN+ I+ QNG+ +AIS F M +
Sbjct: 258 SALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMK---EN 314
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ PN+VTL LSA G L LGK + Y GL D F++ ALIDMY KCGSL+ A
Sbjct: 315 GVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESA 374
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+R F+ +K SWN+MI++ A HG+++ ++ +FE M + + RP+ +TF+SLL+AC
Sbjct: 375 QRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSD-EGGSARPNDITFVSLLSAC 433
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
H GLV++G F +M+ + + P+IEHY C+VDLL RAG EA +V++ M +PD V
Sbjct: 434 VHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVT 493
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
G+L + C+ D E ++ L+E+DP+N G I+ + IY L WD+ ++R ++++
Sbjct: 494 LGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRE 553
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLD 509
KTPGCSWIEV Q+ +F S D
Sbjct: 554 NGVTKTPGCSWIEVGNQLREFLSGD 578
>gi|224139652|ref|XP_002323212.1| predicted protein [Populus trichocarpa]
gi|222867842|gb|EEF04973.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 168/511 (32%), Positives = 271/511 (53%), Gaps = 41/511 (8%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHLTT 74
+L +L+ CN++ LK++Q+ + G + ++ FC + +S +L YA+ +F H+
Sbjct: 12 ILTVLQGCNNLTRLKKIQAHVIVNGLQNHPAISNSILNFCAVSISGSLPYAQHLFRHILN 71
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
P T + ++I +A P+ + F Y M+ P+ F + LK+C + + +
Sbjct: 72 PQTQAWNSIIRGFAQSPSPVQAIF-YYNRMLFDSVSGPDTFTFSFTLKACERIKALKKCE 130
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
VH I+++G+E R+VV T ++ Y R
Sbjct: 131 EVHGSIIRTGYE--------------------------------RDVVVCTGLVRCYGRN 158
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G ++ A +FD+MP+RD+ AWN++I+ +Q G +A+ + M E N+ + TLV
Sbjct: 159 GCVEIARMVFDNMPERDLVAWNAMISCYSQAGYHQEALRVYDYMRNE---NVGVDGFTLV 215
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
LS+ H G L +G +H GL + F+ NALIDMY KCGSL A F+ +
Sbjct: 216 GLLSSCSHVGALNMGVKLHRIASEKGLLRNVFVGNALIDMYAKCGSLDGALEVFNGMPRD 275
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
T WNSMI F +HG + +I F +M+ + +RP+ + F+ LL C+H GLVE+G
Sbjct: 276 AFT-WNSMIVGFGVHGFGDEAIYFFNQML---EAGVRPNSIAFLGLLCGCSHQGLVEEGV 331
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
+F M+ + ++P I+HYGC+VD+ GRAG+ E+ALE++ + D V+W LL+ KI
Sbjct: 332 EFFHQMSSKFNVKPGIKHYGCIVDMYGRAGKLEKALEIIGDSPWQDDPVLWRILLSSSKI 391
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+ E A++ L ++ N G ++LA IY V ++RK++K + TPG S
Sbjct: 392 HKNVVIGEIAMRNLSQLGAVNAGDCVLLATIYAGANDEQGVARMRKLIKKQGIKTTPGWS 451
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
WIEV QVH+F DK+HP +E IY LE +
Sbjct: 452 WIEVSDQVHRFVVDDKSHPDSEMIYQKLEEV 482
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 163/463 (35%), Positives = 262/463 (56%), Gaps = 50/463 (10%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ +FD + + + AMI+ Y + + A L+++M+ +P++ V+ +C
Sbjct: 174 AQKLFDEIPGKDVVSWNAMISGYV-ETGNYKEALELFKEMMMMTNVRPDESTMVTVVSAC 232
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ VH+ I ND G A S+ +V+
Sbjct: 233 AQSDSIELGRHVHSWI-----------------------NDHGFA-------SNLKIVN- 261
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
A+I Y++ G+++ A LFD + ++DV +WN++I G T L+ +A+ F+ M +
Sbjct: 262 -ALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEM---LRS 317
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN------ALIDMYGKC 298
PN VT++ L A H G + +G+ IH Y+ + L ++N +LIDMY KC
Sbjct: 318 GETPNDVTMLSILPACAHLGAIDIGRWIHVYINKK---LKGVVTNVSSLQTSLIDMYAKC 374
Query: 299 GSLKEARRAFDRN-SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
G + A++ FD + S + L++WN+MI+ FA+HG++ + +F M + + I PD +TF
Sbjct: 375 GDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRM---RMNGIEPDDITF 431
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+ LL+AC+H G+++ GR F+ MT+ Y I P++EHYGC++DLLG +G F+EA E++ M
Sbjct: 432 VGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMP 491
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+EPD V+W SLL CKI+G + E KKLI+I+P N G ++L+NIY G+W+EV K
Sbjct: 492 MEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAK 551
Query: 478 VRKMLKDRN-AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
+R +L D+ K PGCS IE+D VH+F DK HP+ EIY
Sbjct: 552 IRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIY 594
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 231/435 (53%), Gaps = 18/435 (4%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFDHLTTPNTYLYTAMITA 86
++ + + + G TN+ KL+ FC + YA +FD + PN ++ M
Sbjct: 4 VRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRG 63
Query: 87 YA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG 144
+A S P SA LY M+ G P+ + +P +LKSC + + +H ++K G
Sbjct: 64 HALSSDPV---SALKLYLVMISLGL-LPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLG 119
Query: 145 FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLF 204
F+ V T+L++ Y+++G + ARK+FD S R+VVS+TA+I+GY G I++A LF
Sbjct: 120 FDLDIYVHTSLISMYAQNGR-LEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLF 178
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
D +P +DV +WN++I+G + G + +A+ F+ M M N+RP++ T+V +SA +
Sbjct: 179 DEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMT--NVRPDESTMVTVVSACAQSD 236
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
++LG+ +H ++ +G + I NALID+Y K G ++ A FD K + SWN++I
Sbjct: 237 SIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIG 296
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
+ + ++ +F+EM+R + P+ VT +S+L AC H G ++ GR + K
Sbjct: 297 GYTHMNLYKEALLLFQEMLRSGE---TPNDVTMLSILPACAHLGAIDIGRWIHVYINKKL 353
Query: 385 R--IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD--F 440
+ + L+D+ + G + A +V W ++++G ++GR + F
Sbjct: 354 KGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAF 413
Query: 441 AEFAVKKLIEIDPNN 455
F+ ++ I+P++
Sbjct: 414 DIFSRMRMNGIEPDD 428
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 157/452 (34%), Positives = 251/452 (55%), Gaps = 40/452 (8%)
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
T Y A+++ Y S + S A L+R M G P N ++ +C + +
Sbjct: 108 TVCYNALVSGYVSN-SKCSDAVLLFRQMNEEGVPV-NSVTLLGLIPACVSPINLELGSSL 165
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGD 196
H +K GF+ V + Y + G+ + A+KLFDEM + ++SW AM+SGY
Sbjct: 166 HCSTLKYGFDSDVSVVNCFITMYMKCGS-VNYAQKLFDEMPVKGLISWNAMVSGY----- 219
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
QNGL ++ + +R M M + + P+ VTLV
Sbjct: 220 --------------------------AQNGLATNVLELYRNMDM---NGVHPDPVTLVGV 250
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
LS+ + G +G + + +G + F++NALI+MY +CG+L +A+ FD ++ L
Sbjct: 251 LSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTL 310
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
SW ++I + +HG E ++ +F+EM+R I PDG F+ +L+AC+H GL +QG Y
Sbjct: 311 VSWTAIIGGYGMHGHGEIAVQLFKEMIR---SGIEPDGTAFVCVLSACSHAGLTDQGLEY 367
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
FK+M + Y++EP EHY C+VDLLGRAGR +EA +++ M I+PD VWG+LL CKI+
Sbjct: 368 FKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHK 427
Query: 437 RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWI 496
+ AE A +++IE++P N GY ++L+NIY V ++R M+K++ K PGCS++
Sbjct: 428 NVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYV 487
Query: 497 EVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
E+ +VH F D+ H +++EIY LE + A+
Sbjct: 488 ELKGRVHPFIVGDRNHLQSDEIYRVLEELEAI 519
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 182/402 (45%), Gaps = 51/402 (12%)
Query: 97 AFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALV 156
A SLY M+R G +PN F +P LKSC + H QI K G P V+T L+
Sbjct: 24 ALSLYPQMLRHGD-RPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLI 82
Query: 157 NSYSRSGNDIGIARKLFDE--MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA 214
+ Y + G+ + ARK+F+E S + V + A++SGY +A LF M + VP
Sbjct: 83 SMYCK-GSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPV 141
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
N VTL+ + A L+LG +H
Sbjct: 142 ----------------------------------NSVTLLGLIPACVSPINLELGSSLHC 167
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
+ G D D + N I MY KCGS+ A++ FD K L SWN+M++ +A +G + N
Sbjct: 168 STLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATN 227
Query: 335 SICVFEEMMRCQDHN-IRPDGVTFISLLNACTHGGLVEQG-RAYFKLMTKTYRIEPQIEH 392
+ E+ R D N + PD VT + +L++C + G G FK+ + P + +
Sbjct: 228 VL----ELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNN 283
Query: 393 YGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE-- 450
L+++ R G +A V GM E V W +++ G ++G + A K++I
Sbjct: 284 --ALINMYARCGNLTKAQAVFDGMP-ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSG 340
Query: 451 IDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
I+P+ + +L+ G D+ + KM+K RN PG
Sbjct: 341 IEPDGTAFVCVLSAC-SHAGLTDQGLEYFKMMK-RNYQLEPG 380
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 150/357 (42%), Gaps = 56/357 (15%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRG-QPQPNQF 115
+K ++ YA+ +FD + + AM++ YA Q A++ LYR+M G P P
Sbjct: 189 MKCGSVNYAQKLFDEMPVKGLISWNAMVSGYA-QNGLATNVLELYRNMDMNGVHPDPVTL 247
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
+ VL SC ++ V ++ SGF P + AL+N Y+R GN + A+ +FD
Sbjct: 248 V--GVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGN-LTKAQAVFDG 304
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSM----PDRDVPAWNSVIAGCTQNGLFSDA 231
M +R +VSWTA+I GY G + A LF M + D A+ V++ C+ GL
Sbjct: 305 MPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQG 364
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
+ +F+ M P + +
Sbjct: 365 LEYFKMMKRNYQLEPGPEHYS-------------------------------------CM 387
Query: 292 IDMYGKCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
+D+ G+ G LKEA+ + K W +++ + +H E + FE ++ +
Sbjct: 388 VDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE-----L 442
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC-LVDLLGRAGRF 406
P+ + + LL+ +G ++M K +++ + GC V+L GR F
Sbjct: 443 EPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLK---KDPGCSYVELKGRVHPF 496
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 98/219 (44%), Gaps = 10/219 (4%)
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
WN+ + + F A+S + +M + RPN T AL + + LG HG
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQM---LRHGDRPNAFTFPFALKSCAALSLPILGSQFHG 64
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN--SKKRLTSWNSMINSFALHGQS 332
+ + G + F+ LI MY K + AR+ F+ N S+K +N++++ + + +
Sbjct: 65 QITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKC 124
Query: 333 ENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEH 392
+++ +F +M + + + VT + L+ AC +E G + T Y + +
Sbjct: 125 SDAVLLFRQM---NEEGVPVNSVTLLGLIPACVSPINLELGSS-LHCSTLKYGFDSDVSV 180
Query: 393 YGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
C + + + G A ++ M ++ + W ++++G
Sbjct: 181 VNCFITMYMKCGSVNYAQKLFDEMPVK-GLISWNAMVSG 218
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 180/593 (30%), Positives = 299/593 (50%), Gaps = 76/593 (12%)
Query: 1 MVSVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTT-LGQSQTNFYAFKLVRFCTLKL 59
+ S + ++ Q VL + R N IN K+LQS + L Q +F +L+ K
Sbjct: 14 LCSRSTATSEAYTQLVLECV-RTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYA-KF 71
Query: 60 SNLTYARFIFDHLTTPNTYLYTAMITAYASQ-------------PAHASSAFS------- 99
L A+ +FD + + + + A+++AYA P S +++
Sbjct: 72 GKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFS 131
Query: 100 ----------LYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
L++ M R G +P ++ +L + +L+ R K +H I+ F
Sbjct: 132 GNSCPQESLELFKRMQREG-FEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNV 190
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR---------------- 193
+ AL + Y++ G +I AR LFD ++ +N+VSW MISGY +
Sbjct: 191 FIWNALTDMYAKCG-EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRL 249
Query: 194 -------------------VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
G + A +F ++D+ W +++ G +NG DA+
Sbjct: 250 SGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLL 309
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
F M +E +I P+ TL +S+ L G+ +HG GL+ + +S+ALIDM
Sbjct: 310 FNEMLLE---HIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDM 366
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KCG + +AR F+ + + SWN+MI A +G ++++ +FE M++ +PD
Sbjct: 367 YSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQ---QKFKPDN 423
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
VTFI +L+AC H +EQG+ YF ++ + + P ++HY C+V+LLGR GR E+A+ ++K
Sbjct: 424 VTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIK 483
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M +PD ++W +LL+ C G AE A + L E+DP IML+N+Y +G+W +
Sbjct: 484 NMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKD 543
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
V VR ++K +N K G SWIE+D +VH+F S D+THP +E+IY+ L ++
Sbjct: 544 VASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIG 596
>gi|345505220|gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]
Length = 612
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 169/494 (34%), Positives = 268/494 (54%), Gaps = 25/494 (5%)
Query: 19 ILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L+ C+ + +K Q+ FL G ++ Y + +K L YAR +FD +
Sbjct: 127 VLKACSRLGFVKEGMQIHGFLRKTG-IWSDLYLQNCLIGLYIKCGCLGYARQVFDRMPRR 185
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
++ Y +MI Y + SA L+ M + + L S ++ +
Sbjct: 186 DSVSYNSMIDGYV-KCGMIESARGLFDLMPKEKKN----------LISWNFMISGYAQRA 234
Query: 136 VHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
+ K F++ P + +L++ Y + G + A+ LF++M R+VV+W M+ GY
Sbjct: 235 DGVNVAKKLFDEMPEKDLISWNSLIDGYVKHGR-MEDAKSLFNKMPKRDVVTWATMVDGY 293
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
++G + A SLFD MP RDV A+NS+I G QN +AI F ME ++ P++
Sbjct: 294 AKLGFVHQAKSLFDRMPLRDVVAYNSMITGYVQNRYHKEAIGIFN--DMEKESHLSPDET 351
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
TLV LSAI G L IH Y+ N L + ALID Y KCGS++++ R F+
Sbjct: 352 TLVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEI 411
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K + WN+MI A+HG E++ F+ +++ + +I+PD +TFI +LNAC+H GLV+
Sbjct: 412 ENKSIDHWNAMIGGLAIHGLGESA---FDMLLQIEKRSIKPDDITFIGVLNACSHSGLVK 468
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G F+LM + ++IEP+++HYGC+VD+L R+G E A +++ M IEP++V+W + L
Sbjct: 469 EGLLCFELMRRKHKIEPKLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTA 528
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C + + E K L N ++L+N+Y G W EVR+VR +K+R K P
Sbjct: 529 CSNHKEFETGELVAKHLFLQGGYNPSSFVLLSNMYASFGMWKEVRRVRTTMKERKLRKIP 588
Query: 492 GCSWIEVDKQVHQF 505
GCSWIE+D VH+F
Sbjct: 589 GCSWIELDGNVHEF 602
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 144/338 (42%), Gaps = 48/338 (14%)
Query: 111 QPNQFIYPHV--LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSY--SRSGNDI 166
QP I P + L SC + S +H +++ +GF + P + T +V + SR
Sbjct: 9 QPWSSISPTIKLLGSCKN---SEDVNKIHARLITNGFIKNPNLTTRIVLDFADSRRSYLA 65
Query: 167 GIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNG 226
AR +F E +V S GD + D WN+VI +
Sbjct: 66 EFARFVFHEY---HVCS----------NGDFE------------DPFLWNAVIKSHSHGL 100
Query: 227 LFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSF 286
A+ F M + + ++ +L L A G ++ G IHG++ + G+ D +
Sbjct: 101 DPRKALLLFCLM---LETGVSVDKFSLSLVLKACSRLGFVKEGMQIHGFLRKTGIWSDLY 157
Query: 287 ISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQ 346
+ N LI +Y KCG L AR+ FDR ++ S+NSMI+ + G E++ +F+ M + +
Sbjct: 158 LQNCLIGLYIKCGCLGYARQVFDRMPRRDSVSYNSMIDGYVKCGMIESARGLFDLMPKEK 217
Query: 347 DHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRF 406
+ I + IS G V + F M E + + L+D + GR
Sbjct: 218 KNLISWN--FMISGYAQRADG--VNVAKKLFDEMP-----EKDLISWNSLIDGYVKHGRM 268
Query: 407 EEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
E+A + M + D V W ++++G Y + F A
Sbjct: 269 EDAKSLFNKMP-KRDVVTWATMVDG---YAKLGFVHQA 302
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 172/507 (33%), Positives = 281/507 (55%), Gaps = 49/507 (9%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
+ L + L +G ++ ++A KL+ F T + L+ AR +FD + N + + A A
Sbjct: 823 RALHAHLVIIGLARLTYFAAKLMSFYT-ECGQLSNARKLFDKIPNTNIRRWIVLTGACAR 881
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
+ + A S + +M + G +PNQF+ P +LK+C + + R + +HT I+K+ FE
Sbjct: 882 RGFY-EEALSAFSEMQKEGL-RPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDA 939
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDR------------------------------ 179
+ +AL+ YS+ G+ + A ++FD + D+
Sbjct: 940 YIISALIYMYSKCGH-VEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQ 998
Query: 180 -----NVVSWTAMISGYTRVGDIKNAASLFDSMP----DRDVPAWNSVIAGCTQNGLFSD 230
NVVSW +I+G+++VGD + +F M + DV +W SVI+G QN +
Sbjct: 999 AGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHE 1058
Query: 231 AISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNA 290
F+ M + P+ VT+ L A + L+ GK IHGY G++ D ++ +A
Sbjct: 1059 GFDAFKEM---LDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSA 1115
Query: 291 LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
L+DMY KCG + EA+ F ++ +WNS+I +A HG +I +F +M ++ +
Sbjct: 1116 LVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQM---EESDT 1172
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
+ D +TF ++LNAC+H G+VE G + F M + YRIEP++EHY C+VDLLGRAG+ EA
Sbjct: 1173 KLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAY 1232
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELG 470
+++K M +EPD+ VWG+LL C+ +G + AE A + L E++P + G ++L+N+Y + G
Sbjct: 1233 DLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAG 1292
Query: 471 KWDEVRKVRKMLKDRNAYKTPGCSWIE 497
+W K++KM+K R K PGCSWIE
Sbjct: 1293 RWGNAAKMKKMMKQRKFGKFPGCSWIE 1319
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 148/519 (28%), Positives = 262/519 (50%), Gaps = 56/519 (10%)
Query: 16 VLAILERCNHINHLKQLQSFL--------TTLGQSQTNFYAFKLVRFCTLKLSNLTYARF 67
+LA+ + I KQL + + T +G + Y+ K + A
Sbjct: 220 MLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYS---------KCGMMEEAEI 270
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F+ L N +TA I + Q A + M+R +PN+F + VL SC V
Sbjct: 271 VFESLRQRNIISWTASINGF-YQHGDFKKALKQF-SMMRESGIEPNEFTFSIVLASCGCV 328
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
+ +M HTQ++K G V TA+++ YS G ++ A K F +M
Sbjct: 329 KDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLG-EMDEAEKQFKQMG---------- 377
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
AAS +WN++IAG N A+ F RM V +++
Sbjct: 378 -----------RAASNV---------SWNALIAGYVLNEKIEKAMEAFCRM---VKEDVA 414
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
N+ T A L IH + ++ ++ + ++++LI+ Y +CGSL+ A +
Sbjct: 415 CNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQV 474
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F + S + SWNS+I +++ +G +I + +M+ + +P TF+++L+AC+H
Sbjct: 475 FTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMI---EEGNKPTSXTFLTVLSACSHS 531
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GLV++G+ +FK M + Y I+P+ H C+VD+LGRAG+ E AL+ +K + ++P +W
Sbjct: 532 GLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRP 591
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LL C+ AE+ +K+++++PN+ + L+N+Y E+G+W + R++++ +
Sbjct: 592 LLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEI 651
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K PGCSWIEV+ ++++F S DK HP ++Y+ L+ +V
Sbjct: 652 SKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLV 690
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 126/268 (47%), Gaps = 7/268 (2%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T++I Y + G++ +A ++D M D N +I+ +NG F A F ++G +
Sbjct: 152 TSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIG---NM 208
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
RPN T L+ G +Q GK +H +V + ++ + NAL+ +Y KCG ++EA
Sbjct: 209 GTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEA 268
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F+ ++ + SW + IN F HG + ++ F MMR + I P+ TF +L +C
Sbjct: 269 EIVFESLRQRNIISWTASINGFYQHGDFKKALKQF-SMMR--ESGIEPNEFTFSIVLASC 325
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
GR + + K + + ++D+ G +EA + K M V
Sbjct: 326 GCVKDFIDGRMFHTQVIKK-GMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVS 384
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEID 452
W +L+ G + + + A A ++++ D
Sbjct: 385 WNALIAGYVLNEKIEKAMEAFCRMVKED 412
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 23/281 (8%)
Query: 196 DIKNAASLFDSMPDR-DVPAWNSVIAGCT---QNGLFSDAISFFRR---MGMEVSDNIRP 248
D+ NA LF+ P R V S +GCT + G+ FF R +E P
Sbjct: 55 DLNNACILFEKTPKRIGVSITESHRSGCTDDPEEGV--KEAGFFTRNETPHVEFGGGF-P 111
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
++ + ALS G G ++LG+ H +V + GL D F+ +LIDMY KCG + A R +
Sbjct: 112 HRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVY 171
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
D+ + + N +I+++A +G + VF M+ + RP+ T+ ++L C
Sbjct: 172 DKMTSLDAATCNCLISAYARNGFFVQAFQVF---MQIGNMGTRPNHYTYSTMLAVCGTIS 228
Query: 369 LVEQGRAYFKLMTKT-YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
+++G+ + K Y E + + L+ L + G EEA V + ++ + + + W +
Sbjct: 229 AIQEGKQLHAHVVKMQYLSETAVGN--ALLTLYSKCGMMEEAEIVFESLR-QRNIISWTA 285
Query: 428 LLNGCKIYGRTDF----AEFAVKKLIEIDPNNGGYGIMLAN 464
+NG Y DF +F++ + I+PN + I+LA+
Sbjct: 286 SING--FYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLAS 324
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 114/264 (43%), Gaps = 18/264 (6%)
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L G+ +H ++ GL ++ + L+ Y +CG L AR+ FD+ + W + +
Sbjct: 819 LYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGA 878
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
A G E ++ F EM Q +RP+ S+L AC H G ++ K
Sbjct: 879 CARRGFYEEALSAFSEM---QKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKN-S 934
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
E L+ + + G E+A V + ++ D VV ++++G +G A V
Sbjct: 935 FESDAYIISALIYMYSKCGHVEKACRVFDWI-VDKDLVVMNAMVSGYAQHGFVHEALBLV 993
Query: 446 KKLIE--IDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV-DKQV 502
+K+ + + PN + ++A + ++G V +V +++ N + SW V V
Sbjct: 994 QKMQQAGVKPNVVSWNTLIAG-FSQVGDKSMVSEVFRLMT-ANGVEPDVVSWTSVISGFV 1051
Query: 503 HQFHSLDKTHPRTEEIYDALESMV 526
FH+ E +DA + M+
Sbjct: 1052 QNFHN--------HEGFDAFKEML 1067
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/519 (32%), Positives = 276/519 (53%), Gaps = 49/519 (9%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAF-KLVRFCTLK--LSNLTYARFIF 69
+ +L+++ +C + LKQ+Q++ T+ Q N KL+ FCT ++++ +A +F
Sbjct: 35 SSSILSLIPKCTSLRELKQIQAY--TIKTHQNNPTVLTKLINFCTSNPTIASMDHAHRMF 92
Query: 70 DHLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
D + P+ L+ M YA P A L V P+ + + +LK+C +
Sbjct: 93 DKIPQPDIVLFNTMARGYARFDDPLRAI----LLCSQVLCSGLLPDDYTFSSLLKACARL 148
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
K +H VK G N+ +
Sbjct: 149 KALEEGKQLHCLAVKLGVGD--------------------------------NMYVCPTL 176
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I+ YT D+ A +FD + + V A+N++I C +N ++A++ FR + ++
Sbjct: 177 INMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQ---ESGLK 233
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P VT++ ALS+ G L LG+ IH YV +NG D ++ ALIDMY KCGSL +A
Sbjct: 234 PTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSV 293
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F ++ +W++MI ++A HG +I + EM + + ++PD +TF+ +L AC+H
Sbjct: 294 FKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAK---VQPDEITFLGILYACSHT 350
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GLVE+G YF MT Y I P I+HYGC++DLLGRAGR EEA + + + I+P ++W +
Sbjct: 351 GLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRT 410
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LL+ C +G + A+ ++++ E+D ++GG ++L+N+ G+WD+V +RKM+ D+ A
Sbjct: 411 LLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGA 470
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K PGCS IEV+ VH+F S D H + ++ AL+ +V
Sbjct: 471 LKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHALDELV 509
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 173/509 (33%), Positives = 264/509 (51%), Gaps = 61/509 (11%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARF--------IFDHLTTPNT 77
++HLKQ + + G Q ++ A LV+ +N++ R+ +FD + PN
Sbjct: 68 LHHLKQAHALILRTGHLQDSYIAGSLVK----SYANVSTNRYLSFESSLRVFDFVRKPNV 123
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+L+ MI + Y MV +PN++ YP VLK+C D VH
Sbjct: 124 FLWNCMIKVCIENNEPFKAILLYYEMMV--AHFRPNKYTYPAVLKACSDAGVVAEGVQVH 181
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
+VK G + ++ + Y+ G + R L D+ + + V
Sbjct: 182 AHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVC-------------- 227
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
MPDR G F +A+ F +M E IRP + L L
Sbjct: 228 ---------MPDR--------------KGCFMEALEIFHQMQKE---KIRPRKFVLPSVL 261
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
SA + G L G+ IH Y RN + LD + +L+DMY KCG + A F++ S K ++
Sbjct: 262 SACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVS 321
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
SWN+MI A+HG++E++I +F +M +I P+ +TF+ +LNAC HGGLV++G F
Sbjct: 322 SWNAMIGGLAMHGRAEDAIDLFSKM------DINPNEITFVGVLNACAHGGLVQKGLTIF 375
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
M K Y +EPQIEHYGC+VDLLGRAG EA +VV + EP VWG+LL C+ +G
Sbjct: 376 NSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGN 435
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
+ E K L+E++P N G +L+NIY + G+W+EV +VRK++K+R TPG S I+
Sbjct: 436 VELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIID 495
Query: 498 VDK-QVHQFHSLDKTHPRTEEIYDALESM 525
+ + +VH+F D +HP+ ++IY L+ +
Sbjct: 496 LGRGEVHKFIIGDGSHPQVKDIYQMLDKV 524
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/502 (33%), Positives = 261/502 (51%), Gaps = 78/502 (15%)
Query: 95 SSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG---------- 144
+ + SLYR M+R G P+ F +P +LKSC + + +H +++ G
Sbjct: 32 TESISLYRSMLRSGS-SPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTA 90
Query: 145 -----------------FEQYP------VVETALVNSYS------------RSGNDIGIA 169
FE+ P V AL++ Y+ R + G++
Sbjct: 91 LISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETGVS 150
Query: 170 ----------------------RKLFDEMSDRNVVSWTAM----ISGYTRVGDIKNAASL 203
R L E S A+ I+ Y + G +++ L
Sbjct: 151 VDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRL 210
Query: 204 FDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHT 263
FD MP + + WN+VI+G +QNGL D + F +M S + P+ TLV LS+ H
Sbjct: 211 FDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMK---SSGVCPDPFTLVSVLSSCAHL 267
Query: 264 GMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMI 323
G ++G+ + V NG + F+SNALI MY +CG+L +AR FD K L SW +MI
Sbjct: 268 GAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMI 327
Query: 324 NSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT 383
+ +HG E + +F++M++ IRPDG F+ +L+AC+H GL ++G F+ M +
Sbjct: 328 GCYGMHGMGETGLTLFDDMIK---RGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKRE 384
Query: 384 YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEF 443
Y++EP EHY CLVDLLGRAGR +EA+E + M +EPD VWG+LL CKI+ D AE
Sbjct: 385 YKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAEL 444
Query: 444 AVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVH 503
A K+IE +P N GY ++++NIY + + + ++R M+++R K PG S++E +VH
Sbjct: 445 AFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGKVH 504
Query: 504 QFHSLDKTHPRTEEIYDALESM 525
F + D++H +TEE++ L+ +
Sbjct: 505 LFLAGDRSHEQTEEVHRMLDEL 526
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 102/222 (45%), Gaps = 14/222 (6%)
Query: 214 AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH 273
+WN + LF+++IS +R M + P+ + L + + G+ +H
Sbjct: 17 SWNVRLRELAYQSLFTESISLYRSM---LRSGSSPDAFSFPFILKSCASLSLPVSGQQLH 73
Query: 274 GYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN--SKKRLTSWNSMINSFALHGQ 331
+V R G + + F+ ALI MY KCG +++AR+ F+ N S + +N++I+ + + +
Sbjct: 74 CHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSK 133
Query: 332 SENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK--TYRIEPQ 389
++ +F M ++ + D VT + L+ CT + GR+ K TY +
Sbjct: 134 VSDAAFMFRRM---KETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYS---E 187
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ + + + G E + M ++ + W ++++G
Sbjct: 188 VAVLNSFITMYMKCGSVESGRRLFDEMPVK-GLITWNAVISG 228
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 84/211 (39%), Gaps = 38/211 (18%)
Query: 16 VLAILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
++++L C H+ K ++ + G + F + L+ + NL AR +FD +
Sbjct: 257 LVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYA-RCGNLAKARAVFDIM 315
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
+ +TAMI Y + +L+ DM++RG +P+ ++ VL +C
Sbjct: 316 PVKSLVSWTAMIGCYGMH-GMGETGLTLFDDMIKRGI-RPDGAVFVMVLSACS------- 366
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
H+ + G E + A+ Y KL + ++ ++
Sbjct: 367 ----HSGLTDKGLELF----RAMKREY-----------KL-----EPGPEHYSCLVDLLG 402
Query: 193 RVGDIKNAASLFDSMP-DRDVPAWNSVIAGC 222
R G + A DSMP + D W +++ C
Sbjct: 403 RAGRLDEAMEFIDSMPVEPDGAVWGALLGAC 433
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 246/458 (53%), Gaps = 40/458 (8%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F+ +T P+ + A+++ + Y+ M+ G +PN F + VL+SC +
Sbjct: 209 VFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQ-MLLEG-FKPNMFTFISVLRSCSSL 266
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
L+ K VH I+K+ + V TALV+ Y++ AR L D
Sbjct: 267 LDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAK-------ARCLED------------- 306
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
A FD + +RD+ +W +I+G Q A+ +FR+M E I+
Sbjct: 307 ------------AGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQRE---GIK 351
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
PN+ TL LS H L+ G+ +H + G D F+ +AL+D+YGKCG ++ A
Sbjct: 352 PNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAI 411
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F + + SWN++I+ ++ HGQ E ++ F M+ I PD TFI +L+AC+
Sbjct: 412 FKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMML---SEGIMPDEATFIGVLSACSFM 468
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GLVE+G+ F M+K Y I P IEHY C+VD+LGRAG+F E ++ M + P ++W +
Sbjct: 469 GLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWET 528
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
+L CK++G DF E A KKL E++P I+L+NI+ G+WD+VR +R ++ R
Sbjct: 529 VLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGI 588
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PGCSW+EVD QVH F S D +HP+ EIY L+ +
Sbjct: 589 KKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKL 626
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 178/388 (45%), Gaps = 54/388 (13%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F + P+ ++AMIT Q H A L+ M R+G +PNQF ++ + ++
Sbjct: 108 VFTKIRNPDVVAWSAMITGL-DQQGHGQEAAELFHLMRRKG-ARPNQFTLSSLVSTATNM 165
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
+ R + +H I K GFE +V L+ Y +S
Sbjct: 166 GDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRC----------------------- 202
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
+++ +F++M + D+ +WN++++G + F +M +E +
Sbjct: 203 ---------VEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLE---GFK 250
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
PN T + L + + GK +H ++ +N D D F+ AL+DMY K L++A A
Sbjct: 251 PNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVA 310
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FDR + + SW +I+ +A Q+E ++ F +M R I+P+ T S L+ C+H
Sbjct: 311 FDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQR---EGIKPNEYTLASCLSGCSHM 367
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYG------CLVDLLGRAGRFEEALEVVKGMKIEPD 421
+E GR + + + + H+G LVDL G+ G E A + KG+ I D
Sbjct: 368 ATLENGR-------QLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL-ISRD 419
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
V W ++++G +G+ + A A + ++
Sbjct: 420 IVSWNTIISGYSQHGQGEKALEAFRMML 447
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 165/385 (42%), Gaps = 45/385 (11%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
+ A +F + N + A++ YA Q L+ M + + + ++F VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYA-QLGDGKKVLKLFCKM-KECETKFSKFTLSTVL 58
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
K C + R K++H ++SG E + +LV+ YS+ G
Sbjct: 59 KGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGT----------------- 101
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
+ +A +F + + DV AW+++I G Q G +A F M +
Sbjct: 102 ---------------VYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRK 146
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
RPNQ TL +S + G L+ G+ IHG + + G + D+ +SN LI MY K +
Sbjct: 147 ---GARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCV 203
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
++ + F+ + L SWN++++ F +F +M+ +P+ TFIS+L
Sbjct: 204 EDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLL---EGFKPNMFTFISVL 260
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
+C+ E G+ + K + LVD+ +A E+A V + D
Sbjct: 261 RSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTA-LVDMYAKARCLEDA-GVAFDRLVNRD 318
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVK 446
W +++G Y +TD AE AVK
Sbjct: 319 IFSWTVIISG---YAQTDQAEKAVK 340
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 163/414 (39%), Gaps = 88/414 (21%)
Query: 17 LAILERCNHI---NHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
+++L C+ + KQ+ + + +F LV K L A FD L
Sbjct: 257 ISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYA-KARCLEDAGVAFDRLV 315
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
+ + +T +I+ YA Q A A +R M R G +PN++ L C +
Sbjct: 316 NRDIFSWTVIISGYA-QTDQAEKAVKYFRQMQREG-IKPNEYTLASCLSGCSHMATLENG 373
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+ +H VK+G V +ALV+ Y + G + A +F + R++VSW +ISGY
Sbjct: 374 RQLHAVAVKAGHFGDIFVGSALVDLYGKCGC-MEHAEAIFKGLISRDIVSWNTIISGY-- 430
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
+Q+G A+ FR M +S+ I P++ T
Sbjct: 431 -----------------------------SQHGQGEKALEAFRMM---LSEGIMPDEATF 458
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYR-NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
+ LSA G+++ GK + + G++ ++D+ G+ G E +
Sbjct: 459 IGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVK------- 511
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+F E M N+ P + + ++L AC G V+
Sbjct: 512 -------------------------IFIEEM-----NLTPYSLIWETVLGACKLHGNVDF 541
Query: 373 GRAYFKLMTKTYRIEPQIE-HYGCLVDLLGRAGRFEE-----ALEVVKGMKIEP 420
G K K + +EP ++ Y L ++ GR+++ AL +G+K EP
Sbjct: 542 GE---KAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEP 592
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 164/500 (32%), Positives = 279/500 (55%), Gaps = 24/500 (4%)
Query: 30 KQLQSFLTTLGQSQT---NFYAFKLVRFCTL----KLSNLTYARFIFDHLTTPNTYLYTA 82
+ LQS+ L +S+ F L++ C L K+ + + + + ++ + Y+ T
Sbjct: 61 RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVV-KYMLHSDLYIETT 119
Query: 83 MITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVK 142
++ YA+ S+ F L+ M R + I ++ CP+ +++ ++ +
Sbjct: 120 LLNMYAACGDLKSARF-LFERMGHRNKVVWTSMISGYMKNHCPN-----EALLLYKKMEE 173
Query: 143 SGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV----VSWTAMISGYTRVGDIK 198
GF V LV++ + D+G+ KL + + ++ V +A+++ Y + GD+K
Sbjct: 174 DGFSPDEVTMATLVSACAEL-KDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLK 232
Query: 199 NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
A +FD + D+DV AW+++I G +N ++A+ FR + N+RPN+VT++ +S
Sbjct: 233 TARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAG--GSNMRPNEVTILAVIS 290
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
A G L+ G+ +H Y+ R ++N+LIDM+ KCG + A+R FD S K L S
Sbjct: 291 ACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLIS 350
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
WNSM+N FALHG ++ F M Q +++PD +TFI +L AC+H GLV++G+ F
Sbjct: 351 WNSMVNGFALHGLGREALAQFRLM---QTTDLQPDEITFIGVLTACSHAGLVQEGKKLFY 407
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
+ Y + + EHYGC+VDLL RAG EA E ++ M ++PD +WGS+L C++Y
Sbjct: 408 EIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNL 467
Query: 439 DFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV 498
+ E A + L++++P N G I+L+NIY + W+EV+KVR+++ ++ KTPGCS + +
Sbjct: 468 ELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVI 527
Query: 499 DKQVHQFHSLDKTHPRTEEI 518
D H F + D +HP EI
Sbjct: 528 DNIAHSFLAGDCSHPEIAEI 547
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 111/234 (47%), Gaps = 11/234 (4%)
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
A S+F + DV WNS++ + + A+ + M +E S N+ P++ T L
Sbjct: 31 AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEM-LERSRNV-PDRFTFPSLLKG 88
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSW 319
++GKV+HG V + L D +I L++MY CG LK AR F+R + W
Sbjct: 89 CALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVW 148
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
SMI+ + + ++ ++++M ++ PD VT +L++AC L + G KL
Sbjct: 149 TSMISGYMKNHCPNEALLLYKKM---EEDGFSPDEVTMATLVSACAE--LKDLGVG-MKL 202
Query: 380 MTKTYRIEPQIEHY--GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ ++ +I LV++ + G + A +V + + D W +L+ G
Sbjct: 203 HSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLS-DKDVYAWSALIFG 255
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 183/570 (32%), Positives = 283/570 (49%), Gaps = 84/570 (14%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYA 88
L+ L + G + NF A L + LS AR +FD + +P+T L+ ++ +
Sbjct: 142 LRPLHALAVASGFAADNFVASALAKL-YFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLS 200
Query: 89 SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQY 148
S A + M G +P+ VL + +V + + VH K G Q+
Sbjct: 201 -----GSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQH 255
Query: 149 PVVET-------------------------------ALVNSYSRSGNDIGIARKLFDEMS 177
V T AL++ YS +G +G + +LF E+
Sbjct: 256 EHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGM-VGSSVELFKELV 314
Query: 178 ---------------------------------------DRNVVSWTAMISGYTRVGDIK 198
D N TA+ + Y R D+
Sbjct: 315 GMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMD 374
Query: 199 NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
+A FD+MP++ + +WN++I+G QNGL A++ F++M + N+RPN +T+ ALS
Sbjct: 375 SARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQ---ALNVRPNPLTISSALS 431
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
A G L LGK +H + L+L+ ++ ALIDMY KCGS+ EAR FD K + S
Sbjct: 432 ACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVS 491
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
WN MI+ + LHGQ ++ ++++MM D ++ P TF+S+L AC+HGGLV++G F+
Sbjct: 492 WNVMISGYGLHGQGAEALKLYKDMM---DAHLHPTSSTFLSVLYACSHGGLVKEGTTVFR 548
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM-KIEPDEVVWGSLLNGCKIYGR 437
MT Y I P IEH C+VDLLGRAG+ +EA E++ K +WG+LL C ++
Sbjct: 549 SMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKD 608
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
D A+ A +KL E++P N GY ++L+N+Y ++ E VR+ K R KTPGC+ IE
Sbjct: 609 GDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIE 668
Query: 498 VDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+ + H F + D+ HP+++ IY LE + A
Sbjct: 669 IGDRPHVFMAGDRAHPQSDAIYLYLEKLTA 698
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 162/469 (34%), Positives = 261/469 (55%), Gaps = 40/469 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K +L AR +FD + N + +MI AY Q + A +++ M+ G +P
Sbjct: 283 KCGSLETARQLFDGMLERNVVSWNSMIDAYV-QNENPKEAMLIFQKMLDEG-VKPTDVSV 340
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
L +C D+ + + +H V+ G
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGL-------------------------------- 368
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
DRNV ++IS Y + ++ AAS+F + R + +WN++I G QNG DA+++F +
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M S ++P+ T V ++AI + K IHG V R+ LD + F++ AL+DMY K
Sbjct: 429 MR---SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG++ AR FD S++ +T+WN+MI+ + HG + ++ +FEEM Q I+P+GVTF
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM---QKGTIKPNGVTF 542
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+S+++AC+H GLVE G F +M + Y IE ++HYG +VDLLGRAGR EA + + M
Sbjct: 543 LSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP 602
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
++P V+G++L C+I+ +FAE A ++L E++P++GGY ++LANIY W++V +
Sbjct: 603 VKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQ 662
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
VR + + KTPGCS +E+ +VH F S HP +++IY LE ++
Sbjct: 663 VRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLI 711
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 184/362 (50%), Gaps = 43/362 (11%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDHLTTPNT 77
+LERC+ + L+Q+ + G Q +F+ KLV FC + ++ A +F+ + +
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFC--RYGSVDEAARVFEPIDSKLN 100
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
LY M+ +A + + A + M R +P + + ++LK C D E R K +H
Sbjct: 101 VLYHTMLKGFA-KVSDLDKALQFFVRM-RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
+VKSGF T L N Y++ +
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQ--------------------------------V 186
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
A +FD MP+RD+ +WN+++AG +QNG+ A+ + M +N++P+ +T+V L
Sbjct: 187 NEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM---CEENLKPSFITIVSVL 243
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
A+ ++ +GK IHGY R+G D IS AL+DMY KCGSL+ AR+ FD ++ +
Sbjct: 244 PAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVV 303
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
SWNSMI+++ + + ++ +F++M+ D ++P V+ + L+AC G +E+GR
Sbjct: 304 SWNSMIDAYVQNENPKEAMLIFQKML---DEGVKPTDVSVMGALHACADLGDLERGRFIH 360
Query: 378 KL 379
KL
Sbjct: 361 KL 362
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 126/247 (51%), Gaps = 8/247 (3%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T ++S + R G + AA +F+ + + +++++ G + A+ FF RM D
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRY---D 129
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
++ P L G L++GK IHG + ++G LD F L +MY KC + EA
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R+ FDR ++ L SWN+++ ++ +G + ++ + + M C++ N++P +T +S+L A
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM--CEE-NLKPSFITIVSVLPAV 246
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+ L+ G+ ++ + + LVD+ + G E A ++ GM +E + V
Sbjct: 247 SALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVS 304
Query: 425 WGSLLNG 431
W S+++
Sbjct: 305 WNSMIDA 311
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 5/175 (2%)
Query: 276 VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
V++NGL + F L+ ++ + GS+ EA R F+ K +++M+ FA + +
Sbjct: 60 VFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKA 119
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ F +R + ++ P F LL C + G+ L+ K+ G
Sbjct: 120 LQFF---VRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTG- 175
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE 450
L ++ + + EA +V M E D V W +++ G G A VK + E
Sbjct: 176 LENMYAKCRQVNEARKVFDRMP-ERDLVSWNTIVAGYSQNGMARMALEMVKSMCE 229
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/349 (42%), Positives = 226/349 (64%), Gaps = 6/349 (1%)
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
+VV A++ Y ++G + +A +F+ + +DV +WN++I G QNGL S+AI ++ M
Sbjct: 451 EDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMM 510
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
E I PNQ T V L A H G LQ G IHG V + L LD F++ LID+YGKC
Sbjct: 511 --EECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKC 568
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G L +A F + ++ +WN++I+ +HG +E ++ +F EM+ D ++PD VTF+
Sbjct: 569 GRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEML---DEGVKPDHVTFV 625
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
SLL+AC+H G VE+G+ F+LM + Y I+P ++HYGC+VDLLGRAG E A +K M +
Sbjct: 626 SLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPL 684
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
+PD +WG+LL C+I+G + +FA +L E+D N GY ++L+NIY +GKW+ V KV
Sbjct: 685 QPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKV 744
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
R + ++R KTPG S IEV+++V F++ +++HP+ +EIY+ L + A
Sbjct: 745 RSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTA 793
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 215/447 (48%), Gaps = 54/447 (12%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
K L + L G+ Q+ F + +LV L +++ +R FD + + Y + +MI+AY
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYA-NLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
H A + ++ + +P+ + +P VLK+C +++ R +H K GF+
Sbjct: 195 N-GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGR---RIHCWAFKLGFQWNV 250
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
V +L++ YSR G GIAR SLFD MP
Sbjct: 251 FVAASLIHMYSRFGF-TGIAR-------------------------------SLFDDMPF 278
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
RD+ +WN++I+G QNG + A+ M +E I+ N VT+V L G +
Sbjct: 279 RDMGSWNAMISGLIQNGNAAQALDVLDEMRLE---GIKMNFVTVVSILPVCPQLGDISTA 335
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
+IH YV ++GL+ D F+SNALI+MY K G+L++AR+AF + + SWNS+I A +
Sbjct: 336 MLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSII---AAY 392
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
Q+++ + ++ Q + +PD +T +SL + + R+ + + +
Sbjct: 393 EQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMED 452
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK--K 447
+ +VD+ + G + A +V + + ++ D + W +L+ G Y + A A++ K
Sbjct: 453 VVIGNAVVDMYAKLGLLDSAHKVFEIILVK-DVISWNTLITG---YAQNGLASEAIEVYK 508
Query: 448 LI----EIDPNNGGYGIMLANIYGELG 470
++ EI PN G + + + Y +G
Sbjct: 509 MMEECKEIIPNQGTW-VSILPAYAHVG 534
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 172/517 (33%), Positives = 277/517 (53%), Gaps = 57/517 (11%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL-----KLSNLTYARFIFDHLT 73
+L+RC H+N L + + L S+ + LV TL K +L YAR +FD ++
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSR---FRDDLVMQNTLLNLYAKCGDLVYARKLFDEMS 77
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP-----DVL 128
+ + +TA+IT Y SQ A L +M+R G +PNQF +LK+ DVL
Sbjct: 78 SRDVVTWTALITGY-SQHDRPQDALLLLPEMLRIGL-KPNQFTLASLLKAASGVGSTDVL 135
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ R +H ++ G+ D NV A++
Sbjct: 136 QGR---QLHGLCLRYGY--------------------------------DSNVYVSCAIL 160
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
Y R ++ A +FD M ++ +WN++IAG + G A F M + +N++P
Sbjct: 161 DMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNM---LRENVKP 217
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
T L A G L+ GK +H + + G L +F+ N L+DMY K GS+++A++ F
Sbjct: 218 THFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVF 277
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
DR +K+ + SWNSM+ ++ HG + ++ FEEM+R + I P+ +TF+ +L AC+H G
Sbjct: 278 DRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTR---IAPNDITFLCVLTACSHAG 334
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
L+++GR YF +M K Y +EPQI HY +VDLLGRAG + A++ + M I+P VWG+L
Sbjct: 335 LLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGAL 393
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
L C+++ + +A + + E+D + G ++L NIY G+W++ KVRKM+K+
Sbjct: 394 LGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVK 453
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K P CSW+E++ +VH F + D HP+ EI++ E +
Sbjct: 454 KEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQI 490
>gi|347954500|gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
Length = 494
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 169/456 (37%), Positives = 261/456 (57%), Gaps = 15/456 (3%)
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC---PDVLE 129
T+ +T+ IT + A +A + DM R +PN + +L +C P E
Sbjct: 29 TSETIVSWTSRITLLSRDDRLAEAARE-FSDM-RLAGIEPNHITFISLLSACGNFPSGSE 86
Query: 130 SRGTKMVHTQIVKSGFEQ-YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ + ++H K G ++ + +V TA++ YS+ G+ + AR +FD M D+N V+W MI
Sbjct: 87 AL-SDLLHGYACKLGLDRSHVMVGTAILGMYSKRGH-VRKARLVFDYMEDKNSVTWNTMI 144
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
GY R G + NA +FD MP+RD+ +W ++I G + G +A+++FR M + + P
Sbjct: 145 DGYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQIS---GVNP 201
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
+ V ++ AL+A + G L G H YV + +SN+LID+Y +CG ++ AR+ F
Sbjct: 202 DYVAIIAALAACTNLGALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYCRCGCVEFARQVF 261
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
D K+ + SWNS+I FA +G + S+ F +M Q+ +PD VTF L AC+H G
Sbjct: 262 DTMEKRTVVSWNSVIVGFAANGNANESLVYFRKM---QEEGFKPDAVTFTGALTACSHVG 318
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
LVE+G YF++M YRI P+IEH+GCLVDL RAGR E+A++VV+ M ++P+EVV GSL
Sbjct: 319 LVEEGFQYFQMMKTDYRISPRIEHFGCLVDLYSRAGRLEDAIKVVESMPMKPNEVVIGSL 378
Query: 429 LNGCKIYG-RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
L C+ +G T AE +K + ++D ++L+N+Y GKW+ K+R+ +K
Sbjct: 379 LAACRNHGNHTILAERLMKHISDLDVKGHSNYVILSNMYAADGKWEGASKMRRKMKGLGL 438
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K PG S IE+D H F + D H T I + LE
Sbjct: 439 KKQPGYSSIEIDDYTHVFMAGDNAHVETAYIREVLE 474
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 136/319 (42%), Gaps = 69/319 (21%)
Query: 164 NDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCT 223
N++ + ++ + +VSWT+ I+ +R + AA F M
Sbjct: 16 NNVNPKIQKLNQSTSETIVSWTSRITLLSRDDRLAEAAREFSDM---------------- 59
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGH--TGMLQLGKVIHGYVYRNGL 281
R G+E PN +T + LSA G+ +G L ++HGY + GL
Sbjct: 60 ------------RLAGIE------PNHITFISLLSACGNFPSGSEALSDLLHGYACKLGL 101
Query: 282 DLDS-FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFE 340
D + A++ MY K G +++AR FD K +WN+MI+ + +GQ +N++ VF+
Sbjct: 102 DRSHVMVGTAILGMYSKRGHVRKARLVFDYMEDKNSVTWNTMIDGYMRNGQVDNAVKVFD 161
Query: 341 EM----------------------------MRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
EM Q + PD V I+ L ACT+ G +
Sbjct: 162 EMPERDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIAALAACTNLGALSF 221
Query: 373 GR-AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
G A+ ++++ +R ++ + L+DL R G E A +V M+ + V W S++ G
Sbjct: 222 GLWAHRYVVSQDFRNNVRVSN--SLIDLYCRCGCVEFARQVFDTME-KRTVVSWNSVIVG 278
Query: 432 CKIYGRTDFAEFAVKKLIE 450
G + + +K+ E
Sbjct: 279 FAANGNANESLVYFRKMQE 297
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 48/243 (19%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + + +TAMIT + + H A + +R+M G P+ L +C ++
Sbjct: 159 VFDEMPERDLISWTAMITGFVKKGFH-EEALAWFREMQISG-VNPDYVAIIAALAACTNL 216
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
H +V F V +L++ Y R G + AR++FD M R VVSW
Sbjct: 217 GALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYCRCGC-VEFARQVFDTMEKRTVVSW--- 272
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
NSVI G NG ++++ +FR+M E +
Sbjct: 273 ----------------------------NSVIVGFAANGNANESLVYFRKMQEE---GFK 301
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS------NALIDMYGKCGSL 301
P+ VT AL+A H G+++ G+ Y + D IS L+D+Y + G L
Sbjct: 302 PDAVTFTGALTACSHVGLVE-----EGFQYFQMMKTDYRISPRIEHFGCLVDLYSRAGRL 356
Query: 302 KEA 304
++A
Sbjct: 357 EDA 359
>gi|10086462|gb|AAG12522.1|AC015446_3 Hypothetical Protein [Arabidopsis thaliana]
Length = 539
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 171/515 (33%), Positives = 285/515 (55%), Gaps = 53/515 (10%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTPNT 77
++++C + +KQLQS T G Q++F +L+ C + +L++A IF ++ P T
Sbjct: 9 MIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLT 68
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQP-----QPNQFIYPHVLKSCPDVLESRG 132
+ A+I +A +H S AFS YR M+++ + + LK+C L S
Sbjct: 69 NDWNAIIRGFAG-SSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+H QI + G ++ T L+++YS++
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKN------------------------------ 157
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
GD+ +A LFD MP RDV +WN++IAG S+A+ ++RM E IR ++VT
Sbjct: 158 --GDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETE---GIRRSEVT 212
Query: 253 LVCALSAIGHTGMLQLGK-VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR- 310
+V AL A H G ++ G+ + HGY N + +SNA IDMY KCG + +A + F++
Sbjct: 213 VVAALGACSHLGDVKEGENIFHGYSNDNVI-----VSNAAIDMYSKCGFVDKAYQVFEQF 267
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
KK + +WN+MI FA+HG++ ++ +F+++ +D+ I+PD V++++ L AC H GLV
Sbjct: 268 TGKKSVVTWNTMITGFAVHGEAHRALEIFDKL---EDNGIKPDDVSYLAALTACRHAGLV 324
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
E G + F M +E ++HYGC+VDLL RAGR EA +++ M + PD V+W SLL
Sbjct: 325 EYGLSVFNNMA-CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLG 383
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
+IY + AE A +++ E+ NN G ++L+N+Y G+W +V +VR ++ + K
Sbjct: 384 ASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKI 443
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PG S+IE +H+F++ DK+H + EIY+ ++ +
Sbjct: 444 PGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEI 478
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 175/545 (32%), Positives = 274/545 (50%), Gaps = 49/545 (8%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYL 79
L+ C+ + + L + G S+ F A L+ L+ AR + D +
Sbjct: 30 LKSCSALRLARALHAAAAVAGVSRDAFVASSLLH-AYLRFGATADARSVLDGMPHRTVVG 88
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK----------------- 122
++A+I A+AS A A+ L M R +PN + ++
Sbjct: 89 WSALIAAHASH-GDAEGAWGLLERM-RSDGVEPNVITWNGLVSGLNRSGRARDAVLALVR 146
Query: 123 -------------SCP-----DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN 164
SC DV + + +H +VK+G V TAL++ Y + G
Sbjct: 147 MHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGR 206
Query: 165 DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR----DVPAWNSVIA 220
I R +FDE S +V S A+++G +R + A LF R +V +W S++A
Sbjct: 207 ADEIVR-VFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVA 265
Query: 221 GCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG 280
C QNG +A+ FR M S+ I PN VT+ C L A + L G+ H + R G
Sbjct: 266 CCVQNGRDLEAVDLFREMQ---SEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKG 322
Query: 281 LDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFE 340
D ++ +AL+DMY KCG +++AR F+ + + SWN+MI +A+HG++EN++ +F
Sbjct: 323 FHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFR 382
Query: 341 EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL 400
M Q +PD VTF +L AC+ G E+GR+YF M + I P++EHY C+V LL
Sbjct: 383 SM---QSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLL 439
Query: 401 GRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI 460
GRAG+ ++A +++ M EPD +WGSLL C+++G AE A + L +++P N G +
Sbjct: 440 GRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYV 499
Query: 461 MLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYD 520
+L+NIY WD V ++R M+K K GCSWIE+ +VH + D +HP I +
Sbjct: 500 LLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITE 559
Query: 521 ALESM 525
L+ +
Sbjct: 560 KLKHL 564
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 167/369 (45%), Gaps = 51/369 (13%)
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
P+ + P LKSC + + +H +G + V ++L+++Y R G AR
Sbjct: 21 PDPRLLPSALKSCSALRL---ARALHAAAAVAGVSRDAFVASSLLHAYLRFGA-TADARS 76
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP----DRDVPAWNSVIAGCTQNGL 227
+ D M R VV W+A+I+ + GD + A L + M + +V WN +++G ++G
Sbjct: 77 VLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGR 136
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
DA+ RM E P+ + CALSA+G G + +G+ +HGYV + G LD+ +
Sbjct: 137 ARDAVLALVRMHGE---GFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACV 193
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
+ ALIDMYGKCG E R FD +S + S N+++ + + Q ++ +F E +
Sbjct: 194 ATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFV---G 250
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC------------ 395
I + V++ S++ C G + F+ M ++ IEP C
Sbjct: 251 RGIELNVVSWTSIVACCVQNGRDLEAVDLFREM-QSEGIEPNSVTIPCVLPAFANIAALM 309
Query: 396 -----------------------LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
LVD+ + GR +A + + M + V W +++ G
Sbjct: 310 HGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYR-NVVSWNAMIGGY 368
Query: 433 KIYGRTDFA 441
++G + A
Sbjct: 369 AMHGEAENA 377
>gi|413953445|gb|AFW86094.1| hypothetical protein ZEAMMB73_140838 [Zea mays]
Length = 508
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 153/382 (40%), Positives = 246/382 (64%), Gaps = 11/382 (2%)
Query: 149 PVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW----TAMISGYTRVGDIKNAASLF 204
P + +ALV+SY+R+G + +R+ FDE+ AM+S Y R G + +A LF
Sbjct: 117 PFLASALVSSYARAGL-LAESRRAFDELPAGAGAGAAAARNAMLSAYARGGRVGDAERLF 175
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
MPDR V +W ++++G QNG +A+ F + M +RPN++T+ L A G
Sbjct: 176 AGMPDRSVVSWTAMVSGYAQNGRHEEAVRTF--LDMWDGAGVRPNELTVSSVLPACAALG 233
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF-DRNSKKRLTSWNSMI 323
L LG+ + Y G+ + +++NAL++MY KCGS++ A + F +++ L SWNSMI
Sbjct: 234 ALALGRKVERYARGRGMLRNVYVANALVEMYAKCGSIRRAWKVFRGMGTRRDLCSWNSMI 293
Query: 324 NSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT 383
+FA+HG ++ +F ++ + +PDG+TF+ ++ ACTHGGLV++G+ F M
Sbjct: 294 MAFAVHGLWTEALALFHKL---RMTGAKPDGITFVGVILACTHGGLVDEGKLLFNSMRGE 350
Query: 384 YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEF 443
+ ++P+IEHYGC+VDLLGRAG +EA ++ M +EPD V+WG+LL C +G + AE
Sbjct: 351 FGLKPRIEHYGCMVDLLGRAGLLKEADSLIASMPMEPDAVIWGALLGACSFHGNFELAEI 410
Query: 444 AVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVH 503
AV+KL+ ++P+N ++L+NIY GKWD V +V K+LK+++ K+ G S+IE+D ++H
Sbjct: 411 AVEKLMHLEPHNTANLVILSNIYASCGKWDGVARVWKLLKEKDHKKSAGYSFIELDGRMH 470
Query: 504 QFHSLDKTHPRTEEIYDALESM 525
+F DK+HPR+E++YDAL+S+
Sbjct: 471 KFLVEDKSHPRSEKVYDALDSI 492
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/510 (32%), Positives = 275/510 (53%), Gaps = 40/510 (7%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
++ + C + + KQ+ T LG + + L+ + L AR +FD +
Sbjct: 93 SLFKSCRNSSEGKQIHCHSTKLGFASDTYAQNTLMNMYS-NCGCLVSARKVFDKMEDKTV 151
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+ MI +A Q + A L+ M++ +PN+ +VL +C + K +H
Sbjct: 152 VSWATMIGVHA-QWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIH 210
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
I + GF ++ V+ T L++ Y + G +
Sbjct: 211 EYIDEHGFGRHVVLNTVLMDVY--------------------------------CKCGCV 238
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
+ A LFD ++++ +WN +I G ++ + +A+ FR M + I+ ++VT+ L
Sbjct: 239 QLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQ---TKGIKGDKVTMASLL 295
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
A H G L+LGK +H Y+ + +D+D + AL+DMY KCGS++ A + F +K +
Sbjct: 296 LACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVM 355
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
+W ++I A+ GQ+EN++ F+EM ++PD +TF+ +L AC+H G V++G ++F
Sbjct: 356 TWTALILGLAMCGQAENALQYFDEM---HIKGVKPDAITFVGVLAACSHAGFVDEGISHF 412
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
M+ TY I+P IEHYG LVD+LGRAGR EA E++K M + PD+ V G LL C+I+G
Sbjct: 413 NSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGN 472
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
+ AE A K+L+EIDP + G ++L+NIY KW+E ++ R+++ +R K PGCS IE
Sbjct: 473 LEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIE 532
Query: 498 VDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
V VH+F D +H ++ EI + LE M++
Sbjct: 533 VHGVVHEFVKGDSSHRQSSEINEMLEDMIS 562
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 199/417 (47%), Gaps = 45/417 (10%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHLTTPNTYLYTAMI 84
++ LKQ+ + + G F A K+V FC+L+ S +L YAR +F + P +Y ++I
Sbjct: 1 MSQLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSII 60
Query: 85 TAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG 144
+ H A Y++M+ +G P+++ +P + KSC + E K +H K G
Sbjct: 61 RGCTDKNLH-QEALLFYQEMMVQGLI-PDRYTFPSLFKSCRNSSEG---KQIHCHSTKLG 115
Query: 145 FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLF 204
F + L+N YS G + ARK+F
Sbjct: 116 FASDTYAQNTLMNMYSNCGCLVS-ARKVF------------------------------- 143
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
D M D+ V +W ++I Q ++A+ F RM S+N++PN+VTLV L+A
Sbjct: 144 DKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMK--SENVKPNEVTLVNVLTACARAR 201
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
L + K IH Y+ +G ++ L+D+Y KCG ++ AR FD+ +K L SWN MIN
Sbjct: 202 DLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMIN 261
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
E ++ +F EM Q I+ D VT SLL ACTH G +E G+ + K
Sbjct: 262 GHVEDSNYEEALLLFREM---QTKGIKGDKVTMASLLLACTHLGALELGK-WLHAYIKKQ 317
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
RI+ + LVD+ + G E A++V M E D + W +L+ G + G+ + A
Sbjct: 318 RIDVDVALGTALVDMYAKCGSIETAIQVFHEMP-EKDVMTWTALILGLAMCGQAENA 373
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 155/461 (33%), Positives = 252/461 (54%), Gaps = 40/461 (8%)
Query: 66 RFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
R +F+ + + + +I+ A H A + R+M +P+ F VL
Sbjct: 150 RKVFEMMPKRDIVSWNTVISGNAQNGMH-EDALMMVREM-GNADLRPDSFTLSSVLPIFA 207
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
+ + K +H +++G++ + ++L++ Y++
Sbjct: 208 EYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKC----------------------- 244
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
TRV D + +F +P D +WNS+IAGC QNG+F + + FF++M +
Sbjct: 245 ------TRVDD---SCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQM---LIAK 292
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
I+PN V+ + A H L LGK +HGY+ R+ D + FI++AL+DMY KCG+++ AR
Sbjct: 293 IKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTAR 352
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
FD+ + SW +MI +ALHG + ++I +F+ M + ++P+ V F+++L AC+
Sbjct: 353 WIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM---EVEGVKPNYVAFMAVLTACS 409
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
H GLV++ YF MT+ YRI P +EHY + DLLGR GR EEA E + M IEP VW
Sbjct: 410 HAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVW 469
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
+LL C+++ + AE KKL +DP N G ++L+NIY G+W + RK+R ++D+
Sbjct: 470 STLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDK 529
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K P CSWIE+ +VH F + DK+HP + I +AL+ ++
Sbjct: 530 GMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLL 570
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 149/294 (50%), Gaps = 14/294 (4%)
Query: 170 RKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
+K+FDE +V S S Y +G ++ +F+ MP RD+ +WN+VI+G QNG+
Sbjct: 124 KKVFDEGKTSDVYSKKEKESYY--LGSLRK---VFEMMPKRDIVSWNTVISGNAQNGMHE 178
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
DA+ R MG + ++RP+ TL L L GK IHGY RNG D D FI +
Sbjct: 179 DALMMVREMG---NADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGS 235
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
+LIDMY KC + ++ R F + SWNS+I +G + + F++M+ +
Sbjct: 236 SLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAK--- 292
Query: 350 IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEA 409
I+P+ V+F S++ AC H + G+ + ++ R + + LVD+ + G A
Sbjct: 293 IKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRS-RFDGNVFIASALVDMYAKCGNIRTA 351
Query: 410 LEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLA 463
+ M++ D V W +++ G ++G + ++ K +E++ Y +A
Sbjct: 352 RWIFDKMELY-DMVSWTAMIMGYALHGHA-YDAISLFKRMEVEGVKPNYVAFMA 403
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
Query: 18 AILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
+I+ C H+ L KQL ++ F A LV K N+ AR+IFD +
Sbjct: 302 SIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYA-KCGNIRTARWIFDKMEL 360
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP-----DVLE 129
+ +TAMI YA HA A SL++ M G +PN + VL +C D
Sbjct: 361 YDMVSWTAMIMGYALH-GHAYDAISLFKRMEVEG-VKPNYVAFMAVLTACSHAGLVDEAW 418
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETAL 155
M + G E Y V L
Sbjct: 419 KYFNSMTQDYRIIPGLEHYAAVADLL 444
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 103/257 (40%), Gaps = 44/257 (17%)
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L+ G+ +HG + R G+ D + NAL++MY K SL+E R ++
Sbjct: 26 LRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEG--GVQRFCDSKMLGGIPEPRE 83
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA---------- 375
S + C +E + D N + ++ I L T+ + ++G+
Sbjct: 84 IGKCSNSHDLPCELDERVAGIDQNGDLNQMSNI-LYQVNTYKKVFDEGKTSDVYSKKEKE 142
Query: 376 --YFKLMTKTYRIEPQ--IEHYGCLVDLLGRAGRFEEALEVVKGM---KIEPDEVVWGS- 427
Y + K + + P+ I + ++ + G E+AL +V+ M + PD S
Sbjct: 143 SYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSV 202
Query: 428 ---------LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
LL G +I+G +A++ + D G L ++Y + + D+ +V
Sbjct: 203 LPIFAEYVNLLKGKEIHG------YAIRNGYDADVFIGS---SLIDMYAKCTRVDDSCRV 253
Query: 479 RKMLKDRNAYKTPGCSW 495
ML + G SW
Sbjct: 254 FYMLPQHD-----GISW 265
>gi|449451283|ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
gi|449519310|ref|XP_004166678.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 565
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 169/554 (30%), Positives = 285/554 (51%), Gaps = 71/554 (12%)
Query: 5 TNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTY 64
TN + + A+L+ C L Q+ + L G Q +F + + + +++++Y
Sbjct: 21 TNPKSNVSLYSISALLKLCKTHIDLHQVHAHLIQKGLEQDSFLVTQFIS-ASNSVAHISY 79
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
+ +FD + +P+T+L+ ++++ Y ++ SLY M +R P+++ +P +LK C
Sbjct: 80 STSVFDRVLSPSTFLWNSLVSGYCAKLQFVD-IISLYVRM-KREDGAPDRYTFPSLLKVC 137
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVN--------------------------- 157
+ +H I++ G ++ V T+LVN
Sbjct: 138 ASEGKMMEGMALHGSILRCGVDEDIYVTTSLVNLYGKGGLIDCARKVFDGMSERNVVSWT 197
Query: 158 ----SYSRSGN------------------------------DIGIARKLFDEMSDRNVVS 183
YS GN D+ A K FDEM ++NVVS
Sbjct: 198 AMIVGYSSIGNLVEAKRLFDLMPERNVASWNAIIGGYMKMGDVKSAEKAFDEMPEKNVVS 257
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
+T MI GY + GD+ +A +LF P+RD+ AW+++I+G TQNG ++A+ F M S
Sbjct: 258 FTTMIDGYAKAGDMLSARNLFQKAPERDIIAWSALISGYTQNGQPNEAVKTFLEMS---S 314
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL-DSFISNALIDMYGKCGSLK 302
N++P++ L + A G L L K + Y R +DL + ++ ALIDM KCG+++
Sbjct: 315 RNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNME 374
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
A F++ K+ L S+ S++ ++HG + ++ +FE M+ ++ PD V F +L
Sbjct: 375 RAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLFERML---GEDLTPDDVAFTVILT 431
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+ GLV++G YF++M Y + P ++HY C+VDLL R+GR +EA E++K + ++
Sbjct: 432 ACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHA 491
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
WG+LL CK+Y ++ AE +LIEI+P N G ++L+NIY +W +V VR +
Sbjct: 492 GAWGALLGACKLYCDSELAEVVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQM 551
Query: 483 KDRNAYKTPGCSWI 496
+R K PGCSWI
Sbjct: 552 NERGLRKIPGCSWI 565
>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 165/499 (33%), Positives = 267/499 (53%), Gaps = 10/499 (2%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
K++ SF+ G F L+ F + + L AR +FD + +T + AM+ Y S
Sbjct: 128 KEVHSFILRRGLEYDIFVVNALITFYS-RCDELVLARIMFDRMPERDTVSWNAMLAGY-S 185
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
Q L+R M+ + +PN VL++C + VH + +S +
Sbjct: 186 QGGSYEECKELFRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMDV 245
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
+ A++ Y++ G + AR+LF+EM +++ +++ +MISGY G + A LF
Sbjct: 246 SLWNAVIGLYAKCG-ILDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFREQER 304
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
+P WN+VI+G QN A+ FR M S RPN VTL L H L+ G
Sbjct: 305 PRLPTWNAVISGLVQNNRQEGAVDIFRAMQ---SHGCRPNTVTLASILPVFSHFSTLKGG 361
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
K IHGY RN D + +++ A+ID Y KCG L A+ FD+ + L +W S+I+++A+H
Sbjct: 362 KEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVH 421
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
G + ++ +F EM+ + I+PD VTF S+L AC H G +++ F ++ Y I+P
Sbjct: 422 GDANVALSLFYEML---TNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPL 478
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
+EHY C+V +L RAG+ +A+E + M +EP VWG+LLNG + G + ++ +L
Sbjct: 479 VEHYACMVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLF 538
Query: 450 EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLD 509
EI+P N G +++AN+Y + G+W + +R ++K+ K PG SWIE + +F
Sbjct: 539 EIEPENTGNYVIMANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWIETSGGMQRF-CXR 597
Query: 510 KTHPRTEEIYDALESMVAL 528
+ RT E+Y LE ++ L
Sbjct: 598 HSSVRTPEVYGMLEGLLGL 616
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 139/256 (54%), Gaps = 11/256 (4%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+ +IS Y++ G I++A ++F +P +++ +WN++ T + + +D + F + S
Sbjct: 42 SKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALFISYTLHNMHTDLLKLFSSLVNSNST 101
Query: 245 NIRPNQVTLVCALSAIG----HTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+++P++ T+ C+L A+ ++G L K +H ++ R GL+ D F+ NALI Y +C
Sbjct: 102 DVKPDRFTVTCSLKALASLFSNSG---LAKEVHSFILRRGLEYDIFVVNALITFYSRCDE 158
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
L AR FDR ++ SWN+M+ ++ G E +F M+ + ++P+ +T +S+
Sbjct: 159 LVLARIMFDRMPERDTVSWNAMLAGYSQGGSYEECKELFRVMLSSVE--VKPNALTAVSV 216
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L AC + G + + ++ +I+ + + ++ L + G + A E+ + M E
Sbjct: 217 LQACAQSNDLTFGIEVHRFVNES-QIKMDVSLWNAVIGLYAKCGILDYARELFEEMP-EK 274
Query: 421 DEVVWGSLLNGCKIYG 436
D + + S+++G ++G
Sbjct: 275 DGITYCSMISGYMVHG 290
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
++GK +H + + + D+F+ + LI Y K GS+++A F + +K + SWN++
Sbjct: 18 FFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALFI 77
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC----THGGLVEQGRAYFKLM 380
S+ LH + + +F ++ +++PD T L A ++ GL ++ ++ ++
Sbjct: 78 SYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSGLAKEVHSF--IL 135
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+ +E I L+ R A + M E D V W ++L G G +
Sbjct: 136 RRG--LEYDIFVVNALITFYSRCDELVLARIMFDRMP-ERDTVSWNAMLAGYSQGGSYEE 192
Query: 441 AEFAVKKL---IEIDPN 454
+ + + +E+ PN
Sbjct: 193 CKELFRVMLSSVEVKPN 209
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 164/466 (35%), Positives = 258/466 (55%), Gaps = 41/466 (8%)
Query: 64 YARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
YA +F + P+T++Y MI +SQ + A SLY +M R + + + +P VLK+
Sbjct: 60 YAHQLFAQIPQPDTFMYNVMIRG-SSQSPNPLRAISLYTEM-HRHFVKGDSYTFPFVLKA 117
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
C + VH +++ GF VV L+ +++ G D+ +A LFD+ +VV+
Sbjct: 118 CTRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCG-DLNVATSLFDDSCKGDVVA 176
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDR-------------------------------DV 212
W+++I+GY R GD+K A LF+ MP+R DV
Sbjct: 177 WSSLIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDV 236
Query: 213 PAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVI 272
+WN++IAG GL A+ F M + P++VTL+ LSA G L+ GK +
Sbjct: 237 VSWNAMIAGYVVCGLSKQALELFNEM---CRAGVFPDEVTLLSLLSACADLGDLENGKKV 293
Query: 273 HGYVYRNGL-DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
H V + L + + NALIDMY KCG++KE+ F + K + SWNS+I ALHG
Sbjct: 294 HAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGH 353
Query: 332 SENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE 391
+ S+ +F+ M R + I P+ +TF+ +L AC+H G +++G YF LM+ Y+IEP I
Sbjct: 354 GKESLSLFKMMQRTK---ICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIR 410
Query: 392 HYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
H GC+VD+LGRAG +EA + + MKIEP+ ++W +LL CK++G + A+ A +KL +
Sbjct: 411 HCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSM 470
Query: 452 DPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
++ G ++++N+Y G+WD KVRK++ D K G S++E
Sbjct: 471 RKDHSGDYVLMSNLYASRGEWDGAEKVRKLMDDSGVTKIRGSSFVE 516
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 128/303 (42%), Gaps = 53/303 (17%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + AR +FD + + AMI Y + A L+ +M R G P++
Sbjct: 216 VKQGEMESARMLFDEAPVKDVVSWNAMIAGYVV-CGLSKQALELFNEMCRAGV-FPDEVT 273
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP-VVETALVNSYSRSGNDIGIARKLFDE 175
+L +C D+ + K VH ++++ + ++ AL++ Y++ GN I + +F
Sbjct: 274 LLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGN-IKESLDVFWS 332
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
++D++V+SW ++I G G K + SLF M
Sbjct: 333 ITDKDVISWNSVIVGMALHGHGKESLSLFKMMQ--------------------------- 365
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS------N 289
I PN++T V L A H G++ GY Y + + + I
Sbjct: 366 -------RTKICPNEITFVGVLVACSHA-----GEIDEGYKYFDLMSSEYKIEPNIRHCG 413
Query: 290 ALIDMYGKCGSLKEARRAFDR-NSKKRLTSWNSMINSFALHGQSENSICVFEEM--MRCQ 346
++DM G+ G LKEA + D + W +++ + +HG E + E++ MR +
Sbjct: 414 CMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMR-K 472
Query: 347 DHN 349
DH+
Sbjct: 473 DHS 475
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 164/500 (32%), Positives = 277/500 (55%), Gaps = 24/500 (4%)
Query: 30 KQLQSFLTTLGQSQT---NFYAFKLVRFCTL----KLSNLTYARFIFDHLTTPNTYLYTA 82
+ LQS+ L +S+ F L++ C L K+ + + + + ++ + Y+ T
Sbjct: 61 RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVV-KYMLHSDLYIETT 119
Query: 83 MITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVK 142
++ YA+ S+ F L+ M R + I ++ CP+ +++ ++ +
Sbjct: 120 LLNMYAACGDLKSARF-LFERMGHRNKVVWTSMISGYMKNHCPN-----EALLLYKKMEE 173
Query: 143 SGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV----VSWTAMISGYTRVGDIK 198
GF V LV++ + D+G+ KL + + ++ V +A+++ Y + GD+K
Sbjct: 174 DGFSPDEVTMATLVSACAEL-KDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLK 232
Query: 199 NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
A +FD + D+DV AW+++I G +N ++A+ FR + N+RPN+VT++ +S
Sbjct: 233 TARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAG--GSNMRPNEVTILAVIS 290
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
A G L+ G+ +H Y+ R ++N+LIDM+ KCG + A+R FD S K L S
Sbjct: 291 ACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLIS 350
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
WNSM+N ALHG ++ F M Q +++PD +TFI +L AC+H GLV++G+ F
Sbjct: 351 WNSMVNGLALHGLGREALAQFHLM---QTTDLQPDEITFIGVLTACSHAGLVQEGKKLFY 407
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
+ Y + + EHYGC+VDLL RAG EA E ++ M ++PD +WGS+L C++Y
Sbjct: 408 EIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNL 467
Query: 439 DFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV 498
+ E A + L+E++P N G I+L+NIY W+EV+KVR+++ ++ KTPGCS + +
Sbjct: 468 ELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVI 527
Query: 499 DKQVHQFHSLDKTHPRTEEI 518
D H F + D +HP EI
Sbjct: 528 DNIAHSFLAGDCSHPEIAEI 547
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 283/512 (55%), Gaps = 47/512 (9%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTPNT 77
+L++C+ + +KQLQ+ L G + KL+ C + +L+YA IF ++ P+T
Sbjct: 7 LLQKCSSFSQIKQLQANLIINGDFHFSSSRTKLLELCAISSFGDLSYALHIFRYIPYPST 66
Query: 78 YLYTAMI--TAYASQPAHASSAFSLYRDMV-RRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
+ A+I TA +S PA+A YR M G + + LK+C L
Sbjct: 67 NDWNAVIRGTALSSDPANA---VFWYRAMAASNGLHRIDALTCSFALKACARALARSEAI 123
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H+Q+++ GF +++T L+++Y++ +
Sbjct: 124 QLHSQLLRFGFNADVLLQTTLLDAYAK--------------------------------I 151
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
GD+ A LFD MP D+ +WN++IAG Q +DAI F+RM +V N+RPN VT+
Sbjct: 152 GDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRM--KVDGNLRPNAVTVQ 209
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR-NSK 313
AL A G L+ G+ +H Y+ L+ + + N +IDMY KCGS+ +A F+
Sbjct: 210 GALLACSQLGALKEGESVHKYIVEEKLNSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCD 269
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K L +WN+MI +FA+HG ++ +FE++ R + PD V+++++L AC H GLVE G
Sbjct: 270 KSLITWNTMIMAFAMHGDGHKALDLFEKLGR---SGMSPDAVSYLAVLCACNHAGLVEDG 326
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
F MT+ +EP I+HYG +VDLLGRAGR +EA ++V + P+ V+W +LL C+
Sbjct: 327 LKLFNSMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLWQTLLGACR 384
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
YG + AE A +KL+E+ + G ++L+N+Y +WD+V +VR ++ R+ KTPG
Sbjct: 385 TYGDVEMAELASRKLVEMGFISCGDFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGF 444
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
S+IE+ ++++F + D++H EIY L+ +
Sbjct: 445 SYIEIKGKMYKFVNGDQSHSSCREIYAKLDEI 476
>gi|449492842|ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 253/448 (56%), Gaps = 12/448 (2%)
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG--TKMV 136
L+T+ + Y + +A R +R +PN + +L +C D +
Sbjct: 59 LWTSSLARYCRNGQLSEAAAEFTR--MRLAGVEPNHITFITLLSACADFPSESFFFASSL 116
Query: 137 HTQIVKSGFEQ-YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
H K G + + +V TAL++ YS+ +G ARK+F + +N VSW M++G+ R G
Sbjct: 117 HGYACKYGLDTGHVMVGTALIDMYSKCAQ-LGHARKVFYNLGVKNSVSWNTMLNGFMRNG 175
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
+I+ A LFD MP RD +W ++I G ++G A+ F +M + + V+++
Sbjct: 176 EIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ---RSGVAADYVSIIA 232
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
L+A G L LG +H +V + ISN+LIDMY +CG ++ AR+ F + +K+
Sbjct: 233 VLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRT 292
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
L SWNS+I FA++G ++ S+ F M Q +PDGV++ L AC+H GLV +G
Sbjct: 293 LVSWNSIIVGFAVNGFADESLEFFXAM---QKEGFKPDGVSYTGALTACSHAGLVNKGLE 349
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
F M ++I P+IEHYGC+VDL GRAGR E+AL +++ M ++P+EVV GSLL C+ +
Sbjct: 350 LFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTH 409
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
G + AE +K L ++DP Y ++L+NIY +GKWD VR+ +K R K PG S
Sbjct: 410 GDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSS 469
Query: 496 IEVDKQVHQFHSLDKTHPRTEEIYDALE 523
+E+D +VH+F + D H + IY L+
Sbjct: 470 VEIDGKVHEFVAGDNYHADADNIYSMLD 497
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 38/274 (13%)
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
+N +S F+ + W S +A +NG S+A + F RM + + PN +T + L
Sbjct: 43 RNISSKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLA---GVEPNHITFITLL 99
Query: 258 SAIGH--TGMLQLGKVIHGYVYRNGLDLDS-FISNALIDMYGKCGSLKEARRAFDRNSKK 314
SA + +HGY + GLD + ALIDMY KC L AR+ F K
Sbjct: 100 SACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVK 159
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEM------------------------MRC----Q 346
SWN+M+N F +G+ E +I +F+EM + C Q
Sbjct: 160 NSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ 219
Query: 347 DHNIRPDGVTFISLLNACTHGGLVEQGRAYFK-LMTKTYRIEPQIEHYGCLVDLLGRAGR 405
+ D V+ I++L AC G + G + +M + ++ +I + L+D+ R G
Sbjct: 220 RSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISN--SLIDMYSRCGC 277
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
E A +V M + V W S++ G + G D
Sbjct: 278 IEFARQVFVKMA-KRTLVSWNSIIVGFAVNGFAD 310
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 159/475 (33%), Positives = 262/475 (55%), Gaps = 46/475 (9%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
KL L R +FD +++ + + ++I+ + Q +SA ++ M R P+
Sbjct: 217 KLGMLEEVRKVFDGMSSRDLVTWNSIISGH-EQGGQVASAVEMFCGM-RDSGVSPDVLTL 274
Query: 118 ---PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
+ C D+ G + VH +V+ G+ D+G
Sbjct: 275 LSLASAIAQCGDIC---GGRSVHCYMVRRGW-------------------DVG------- 305
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
++++ A++ Y ++ I+ A +FDSMP RD +WN++I G QNGL S+AI
Sbjct: 306 -----DIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHV 360
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
+ M + + ++P Q T V L A H G LQ G +H + GL+LD ++ +ID+
Sbjct: 361 YDHM--QKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDL 418
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KCG L EA F++ ++ WN++I+ +HG ++ +F +M Q I PD
Sbjct: 419 YAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQM---QQEGISPDH 475
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
VTF+SLL AC+H GLV+QGR +F +M Y I+P +HY C+VD+ GRAG+ ++A + ++
Sbjct: 476 VTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIR 535
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M I+PD +WG+LL C+I+G + + A + L E+DP N GY ++++N+Y ++GKWD
Sbjct: 536 NMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDG 595
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDK--THPRTEEIYDALESMVA 527
V +VR +++ +N KTPG S IEV + V+ F+S ++ HP+ EEI L ++A
Sbjct: 596 VDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLA 650
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 129/248 (52%), Gaps = 11/248 (4%)
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME--VS 243
A++ Y R G +++A FD M RDVPAWN++++G +N ++A+ F RM ME
Sbjct: 109 ALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAG 168
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
D + + V +C L G L +H Y ++GLD + F+ NA+ID+YGK G L+E
Sbjct: 169 DAVTVSSVLPMCVL-----LGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEE 223
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
R+ FD S + L +WNS+I+ GQ +++ +F M +D + PD +T +SL +A
Sbjct: 224 VRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGM---RDSGVSPDVLTLLSLASA 280
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
G + GR+ M + I +VD+ + + E A + M + D V
Sbjct: 281 IAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVR-DAV 339
Query: 424 VWGSLLNG 431
W +L+ G
Sbjct: 340 SWNTLITG 347
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 132/338 (39%), Gaps = 48/338 (14%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYL 79
+ +C I + + ++ G + A + KLS + A+ +FD + +
Sbjct: 281 IAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVS 340
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE-SRGTKMVHT 138
+ +IT Y Q AS A +Y M + +P Q + VL + + +GT+M H
Sbjct: 341 WNTLITGYM-QNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRM-HA 398
Query: 139 QIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIK 198
+K+G V T +++ Y++ G + A LF++ R+ W A+ISG G
Sbjct: 399 LSIKTGLNLDVYVGTCVIDLYAKCGK-LDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGA 457
Query: 199 NAASLFDSMPDRDVP----AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
A SLF M + + S++A C+ GL +FF M+ + I+P
Sbjct: 458 KALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNM--MQTAYGIKPIAKHYA 515
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
C ++DM+G+ G L +A F RN
Sbjct: 516 C-----------------------------------MVDMFGRAGQLDDAFD-FIRNMPI 539
Query: 315 RLTS--WNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
+ S W +++ + +HG E + + N+
Sbjct: 540 KPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNV 577
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 272 IHGYVYRNGL-DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG 330
+H R GL D+F S AL+ Y + G +++A RAFD + + +WN+M++ +
Sbjct: 90 LHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNA 149
Query: 331 QSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQI 390
++ ++ +F M+ + D VT S+L C V G L Y ++ +
Sbjct: 150 RAAEAVGLFGRMVM---EGVAGDAVTVSSVLPMC-----VLLGDRALALAMHLYAVKHGL 201
Query: 391 --EHYGC--LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
E + C ++D+ G+ G EE +V GM D V W S+++G
Sbjct: 202 DDELFVCNAMIDVYGKLGMLEEVRKVFDGMS-SRDLVTWNSIISG 245
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 180/593 (30%), Positives = 298/593 (50%), Gaps = 76/593 (12%)
Query: 1 MVSVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTT-LGQSQTNFYAFKLVRFCTLKL 59
+ S + ++ Q VL + R N IN K+LQS + L Q +F +L+ K
Sbjct: 14 LCSRSTATSEAYTQLVLECV-RTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYA-KF 71
Query: 60 SNLTYARFIFDHLTTPNTYLYTAMITAYASQ-------------PAHASSAFS------- 99
L A+ +FD + + + + A+++AYA P S +++
Sbjct: 72 GKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFS 131
Query: 100 ----------LYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
L++ M R G +P ++ +L + + + R K +H I+ F
Sbjct: 132 GNSCPQESLELFKRMQREG-FEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNV 190
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR---------------- 193
+ AL + Y++ G +I AR LFD ++ +N+VSW MISGY +
Sbjct: 191 FIWNALTDMYAKCG-EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRL 249
Query: 194 -------------------VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
G + A +F ++D+ W +++ G +NG DA+
Sbjct: 250 SGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLL 309
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
F M +E +I P+ TL +S+ L G+ +HG GL+ + +S+ALIDM
Sbjct: 310 FNEMLLE---HIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDM 366
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KCG + +AR F+ + + SWN+MI A +G ++++ +FE M++ +PD
Sbjct: 367 YSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQ---QKFKPDN 423
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
VTFI +L+AC H +EQG+ YF +T + + P ++HY C+V+LLGR GR E+A+ ++K
Sbjct: 424 VTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIK 483
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M +PD ++W +LL+ C G AE A + L E+DP IML+N+Y +G+W +
Sbjct: 484 NMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKD 543
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
V VR ++K +N K G SWIE+D +VH+F S D+THP +E+IY+ L ++
Sbjct: 544 VASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIG 596
>gi|334183024|ref|NP_174678.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806500|sp|Q9FX24.2|PPR71_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g34160
gi|332193557|gb|AEE31678.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 171/515 (33%), Positives = 285/515 (55%), Gaps = 53/515 (10%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTPNT 77
++++C + +KQLQS T G Q++F +L+ C + +L++A IF ++ P T
Sbjct: 9 MIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLT 68
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQP-----QPNQFIYPHVLKSCPDVLESRG 132
+ A+I +A +H S AFS YR M+++ + + LK+C L S
Sbjct: 69 NDWNAIIRGFAG-SSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+H QI + G ++ T L+++YS++
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKN------------------------------ 157
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
GD+ +A LFD MP RDV +WN++IAG S+A+ ++RM E IR ++VT
Sbjct: 158 --GDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETE---GIRRSEVT 212
Query: 253 LVCALSAIGHTGMLQLGK-VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR- 310
+V AL A H G ++ G+ + HGY N + +SNA IDMY KCG + +A + F++
Sbjct: 213 VVAALGACSHLGDVKEGENIFHGYSNDNVI-----VSNAAIDMYSKCGFVDKAYQVFEQF 267
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
KK + +WN+MI FA+HG++ ++ +F+++ +D+ I+PD V++++ L AC H GLV
Sbjct: 268 TGKKSVVTWNTMITGFAVHGEAHRALEIFDKL---EDNGIKPDDVSYLAALTACRHAGLV 324
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
E G + F M +E ++HYGC+VDLL RAGR EA +++ M + PD V+W SLL
Sbjct: 325 EYGLSVFNNMA-CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLG 383
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
+IY + AE A +++ E+ NN G ++L+N+Y G+W +V +VR ++ + K
Sbjct: 384 ASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKI 443
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PG S+IE +H+F++ DK+H + EIY+ ++ +
Sbjct: 444 PGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEI 478
>gi|449443656|ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 253/448 (56%), Gaps = 12/448 (2%)
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG--TKMV 136
L+T+ + Y + +A R +R +PN + +L +C D +
Sbjct: 59 LWTSSLARYCRNGQLSEAAAEFTR--MRLAGVEPNHITFITLLSACADFPSESFFFASSL 116
Query: 137 HTQIVKSGFEQ-YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
H K G + + +V TAL++ YS+ +G ARK+F + +N VSW M++G+ R G
Sbjct: 117 HGYACKYGLDTGHVMVGTALIDMYSKCAQ-LGHARKVFYNLGVKNSVSWNTMLNGFMRNG 175
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
+I+ A LFD MP RD +W ++I G ++G A+ F +M + + V+++
Sbjct: 176 EIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ---RSGVAADYVSIIA 232
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
L+A G L LG +H +V + ISN+LIDMY +CG ++ AR+ F + +K+
Sbjct: 233 VLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRT 292
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
L SWNS+I FA++G ++ S+ F M Q +PDGV++ L AC+H GLV +G
Sbjct: 293 LVSWNSIIVGFAVNGFADESLEFFYAM---QKEGFKPDGVSYTGALTACSHAGLVNKGLE 349
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
F M ++I P+IEHYGC+VDL GRAGR E+AL +++ M ++P+EVV GSLL C+ +
Sbjct: 350 LFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTH 409
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
G + AE +K L ++DP Y ++L+NIY +GKWD VR+ +K R K PG S
Sbjct: 410 GDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSS 469
Query: 496 IEVDKQVHQFHSLDKTHPRTEEIYDALE 523
+E+D +VH+F + D H + IY L+
Sbjct: 470 VEIDGKVHEFVAGDNYHADADNIYSMLD 497
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 38/274 (13%)
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
+N +S F+ + W S +A +NG S+A + F RM + + PN +T + L
Sbjct: 43 RNISSKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLA---GVEPNHITFITLL 99
Query: 258 SAIGH--TGMLQLGKVIHGYVYRNGLDLDS-FISNALIDMYGKCGSLKEARRAFDRNSKK 314
SA + +HGY + GLD + ALIDMY KC L AR+ F K
Sbjct: 100 SACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVK 159
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEM------------------------MRC----Q 346
SWN+M+N F +G+ E +I +F+EM + C Q
Sbjct: 160 NSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ 219
Query: 347 DHNIRPDGVTFISLLNACTHGGLVEQGRAYFK-LMTKTYRIEPQIEHYGCLVDLLGRAGR 405
+ D V+ I++L AC G + G + +M + ++ +I + L+D+ R G
Sbjct: 220 RSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISN--SLIDMYSRCGC 277
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
E A +V M + V W S++ G + G D
Sbjct: 278 IEFARQVFVKMA-KRTLVSWNSIIVGFAVNGFAD 310
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 160/455 (35%), Positives = 253/455 (55%), Gaps = 20/455 (4%)
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
PN +T++++++A + H L+ M +G P + VL C D+ +
Sbjct: 238 PNPVTWTSLLSSHA-RCGHLEETMVLFCKMRMKG-VGPTAEMLAVVLSVCADLATLNSGQ 295
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
M+H +VK GF Y + AL+ Y + G +G A KLF EM +N+VSW A+IS +
Sbjct: 296 MIHGYMVKGGFNDYLFAKNALITLYGKGGG-VGDAEKLFHEMKVKNLVSWNALISSFAES 354
Query: 195 GDIKNAASLF------DSMPDR--DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
G A L ++ P+ +V W+++I G GL +++ FR+M + N+
Sbjct: 355 GVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLGEESLEVFRKMQLA---NV 411
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
+ N VT+ LS L LG+ +HG+V R +D + + N LI+MY KCGS K
Sbjct: 412 KANSVTIASVLSICAMLAALNLGREMHGHVIRARMDDNVLVGNGLINMYTKCGSFKPGFM 471
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F++ + SWNSMI + HG ++++ F M++ RPDGVTFI+ L+AC+H
Sbjct: 472 VFEKLENRDSISWNSMIAGYGTHGLGKDALATFNHMIKS---GYRPDGVTFIAALSACSH 528
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GLV +G F M + ++IEP+IEHY C+VDLLGRAG EEA ++KGM +EP+ +W
Sbjct: 529 AGLVAEGHWLFSQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKGMPMEPNAYIWS 588
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
SLLN C+++ TD AE A K+ ++ G ++L+NI+ +W++ +VR + +
Sbjct: 589 SLLNSCRMHKDTDLAEEAAAKISNLNSKITGSHMLLSNIFAASCRWEDSARVRISARAKG 648
Query: 487 AYKTPGCSWIEVDKQVHQF---HSLDKTHPRTEEI 518
K PG SWIEV K+V+ F +++ + + +EI
Sbjct: 649 LKKVPGWSWIEVKKKVYMFKAGYTISEGLEKVDEI 683
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 180/372 (48%), Gaps = 19/372 (5%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP--- 75
+L +CN I H KQ+ S G + F + +LV + + ++ AR +F + P
Sbjct: 44 LLRQCNGIQHSKQVHSATVVTGAYCSAFVSARLVSIYS-RYGLVSDARKVFG--SAPFEC 100
Query: 76 --NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
N L+ ++I A + A LY M G + F +P +L++ ++
Sbjct: 101 YSNFLLWNSIIRANVYH-GYCIEALQLYGKMRNYG-VLGDGFTFPLLLRASSNLGAFNMC 158
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
K +H +V+ GF+ + V L+ Y++ + ARK+FD+M ++VVSW M+SGY
Sbjct: 159 KNLHCHVVQFGFQNHLHVGNELIGMYAKL-ERMDDARKVFDKMRIKSVVSWNTMVSGYAY 217
Query: 194 VGDIKNAASLFDSMPDRDVP----AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
D+ A+ +F M V W S+++ + G + + F +M M+ + P
Sbjct: 218 NYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMK---GVGPT 274
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
L LS L G++IHGY+ + G + F NALI +YGK G + +A + F
Sbjct: 275 AEMLAVVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFH 334
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDH-NIRPDGVTFISLLNACTHGG 368
K L SWN++I+SFA G + ++ + ++ + + + ++P+ +T+ +++ G
Sbjct: 335 EMKVKNLVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKG 394
Query: 369 LVEQGRAYFKLM 380
L E+ F+ M
Sbjct: 395 LGEESLEVFRKM 406
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 27/276 (9%)
Query: 187 MISGYTRVGDIKNAASLFDSMPDR---DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
++S Y+R G + +A +F S P + WNS+I +G +A+ + +M +
Sbjct: 76 LVSIYSRYGLVSDARKVFGSAPFECYSNFLLWNSIIRANVYHGYCIEALQLYGKMR---N 132
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
+ + T L A + G + K +H +V + G + N LI MY K + +
Sbjct: 133 YGVLGDGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDD 192
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
AR+ FD+ K + SWN+M++ +A + + +F +M + + P+ VT+ SLL++
Sbjct: 193 ARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQM---ELEGVEPNPVTWTSLLSS 249
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
G +E+ F C + + G G E L VV + + +
Sbjct: 250 HARCGHLEETMVLF-----------------CKMRMKG-VGPTAEMLAVVLSVCADLATL 291
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYG 459
G +++G + G + FA LI + GG G
Sbjct: 292 NSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGGVG 327
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 167/519 (32%), Positives = 271/519 (52%), Gaps = 41/519 (7%)
Query: 1 MVSVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS 60
M+S + + L +L + K++ ++ G S F L+ K
Sbjct: 340 MISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDI-YFKCR 398
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
++ AR IFD T + + TAMI+ Y + ++A ++R +++ + + N V
Sbjct: 399 DVEMARKIFDQRTPVDIVVCTAMISGYVLNGMN-NNALEIFRWLLQE-RMRANSVTLASV 456
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
L +C + K +H I+K+G V +A+++ Y++ G
Sbjct: 457 LPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGR---------------- 500
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
+ A F + D+D WNS+I C+QNG +AI FR+MGM
Sbjct: 501 ----------------LDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGM 544
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ + V++ ALSA + L GK IH ++ R D F +ALIDMY KCG+
Sbjct: 545 A---GTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGN 601
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
L A R FD +K SWNS+I ++ HG+ ++S+ +F M+ I+PD VTF+++
Sbjct: 602 LDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGML---GDGIQPDHVTFLAI 658
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
++AC H G V++G YF+ MT+ I ++EHY C+VDL GRAGR EA ++ M P
Sbjct: 659 ISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSP 718
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
D VWG+LL C+++G + AE A + L ++DP N GY ++L+N++ G+W+ V K+R
Sbjct: 719 DAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRS 778
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
++K+R K PGCSWI+V+ H F + D++HP++ +IY
Sbjct: 779 LMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIY 817
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 172/383 (44%), Gaps = 54/383 (14%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR++FD + + + L+ M+ Y +A ++ +M RR + PN + VL C
Sbjct: 201 ARYLFDRMPSKDGVLWNVMLNGYVKN-GDWDNATGVFMEM-RRTETNPNSVTFACVLSVC 258
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ +H +V SG E V L+ Y++ G+ LFD
Sbjct: 259 ASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGH-------LFD---------- 301
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
A LFD MP D+ WN +I+G QNG +A F M +S
Sbjct: 302 ---------------ARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEM---ISA 343
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
++P+ +T L + L+ GK IH Y+ RNG+ LD F+ +ALID+Y KC ++ A
Sbjct: 344 RMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMA 403
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R+ FD+ + + +MI+ + L+G + N++ +F +++ +R + VT S+L AC
Sbjct: 404 RKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQ---ERMRANSVTLASVLPAC 460
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYG------CLVDLLGRAGRFEEALEVVKGMKI 418
+ G+ + K H G ++D+ + GR + A + G+
Sbjct: 461 AGLAALTLGKELHGHILKN-------GHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGIS- 512
Query: 419 EPDEVVWGSLLNGCKIYGRTDFA 441
+ D V W S++ C G+ + A
Sbjct: 513 DKDAVCWNSMITSCSQNGKPEEA 535
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 169/369 (45%), Gaps = 44/369 (11%)
Query: 9 NQTLNQQVLAILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYA 65
+ +L Q+++IL+ C + L +Q + + G KL+ L + L A
Sbjct: 42 DDSLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLD-A 100
Query: 66 RFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
+ IF L + + MI + + A Y M+ G P+++ +P+V+K+C
Sbjct: 101 KNIFYQLRLWCSEPWNWMIRGF-TMMGQFDFALLFYFKMLGCGT-LPDKYTFPYVIKACG 158
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
+ ++VH +I GFE V ++L+ YS +G
Sbjct: 159 GLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGC--------------------- 197
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
I +A LFD MP +D WN ++ G +NG + +A F M ++
Sbjct: 198 -----------IHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETN- 245
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
PN VT C LS M+ G +HG V +GL++DS ++N L+ MY KCG L +AR
Sbjct: 246 --PNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDAR 303
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
R FD K L +WN MI+ + +G + + C+F EM+ + ++PD +TF S L +
Sbjct: 304 RLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAR---MKPDSITFSSFLPLLS 360
Query: 366 HGGLVEQGR 374
G + QG+
Sbjct: 361 EGATLRQGK 369
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 122/271 (45%), Gaps = 8/271 (2%)
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
N + T ++ Y G +A ++F + WN +I G T G F A+ F+ +M
Sbjct: 80 NGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKM- 138
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
+ P++ T + A G + LG+V+H + G +LD F+ ++LI Y + G
Sbjct: 139 --LGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENG 196
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
+ +AR FDR K WN M+N + +G +N+ VF EM R + + P+ VTF
Sbjct: 197 CIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETN---PNSVTFAC 253
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
+L+ C ++ G L+ + +E L+ + + G +A + M +
Sbjct: 254 VLSVCASEIMINFGSQLHGLVVSS-GLEMDSPVANTLLAMYAKCGHLFDARRLFDMMP-K 311
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE 450
D V W +++G G D A ++I
Sbjct: 312 TDLVTWNGMISGYVQNGFMDEASCLFHEMIS 342
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 16/231 (6%)
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
D++ P V++ L L G+ H + NG+ + + L+ MY CG+ +
Sbjct: 43 DSLAPQLVSI---LQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLD 99
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A+ F + WN MI F + GQ + ++ + +M+ C PD TF ++ A
Sbjct: 100 AKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGC---GTLPDKYTFPYVIKA 156
Query: 364 CTHGGL--VEQGR-AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
C GGL V GR + K+ + ++ + L+ G +A + M
Sbjct: 157 C--GGLNSVALGRVVHDKIQFMGFELDVFVG--SSLIKFYSENGCIHDARYLFDRMP-SK 211
Query: 421 DEVVWGSLLNGCKIYGRTDFAE--FAVKKLIEIDPNNGGYGIMLANIYGEL 469
D V+W +LNG G D A F + E +PN+ + +L+ E+
Sbjct: 212 DGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEI 262
>gi|225433758|ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 636
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 285/528 (53%), Gaps = 52/528 (9%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTT 74
+L+ L++ + + ++Q Q +T G F K++ F +L L +L YA+ IF+
Sbjct: 115 LLSKLQQLSSVKEVEQTQCLITKSGLFNHPFVISKIISFLSLSPLGSLVYAQAIFEDTAM 174
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL-----E 129
N ++ MI AYA + A LY M R+ + + F YP LK+C VL +
Sbjct: 175 DNPFVCNTMIRAYA-KSVFPIKAIYLYNFMHRK-DIKSDHFTYPFGLKACARVLWCNEGD 232
Query: 130 SRGTKM--------VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR-- 179
+ T++ +H ++ + G +Q ++ +LV YS+ G + +AR +FDEM+++
Sbjct: 233 IKCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLYSQCGF-LDLARCVFDEMTEKTI 291
Query: 180 -----------------------------NVVSWTAMISGYTRVGDIKNAASLFDSMPDR 210
NVVSW +I+ Y R+G I++A +F MP+R
Sbjct: 292 TSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNMLIARYIRLGKIEDAKVVFQEMPER 351
Query: 211 DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK 270
D +WNS+IAG Q ++ A++ FR M E++ N+ +TL+ L A TG L++G+
Sbjct: 352 DAVSWNSMIAGYVQIKDYARALALFREM--EIA-NVEATDITLISVLGACAETGALEIGR 408
Query: 271 VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG 330
IH + + ++ ++SNAL+DMY KCG L A F K ++ WN+MI S A+HG
Sbjct: 409 KIHLSLKQREYKIEGYLSNALVDMYAKCGHLNLAWEVFSELKMKHISCWNAMIVSLAVHG 468
Query: 331 QSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQI 390
E ++ +F M D RP+ VTFI +L AC+H GLV++GR +F M Y+I P I
Sbjct: 469 YCEEALRLFSTMEMSVD-GARPNRVTFIGVLIACSHKGLVDEGRTFFNRMVNEYKIMPDI 527
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE 450
+HYGC+VDLL R G +EA ++K M E + V+W +LL C+++ D AE + ++L +
Sbjct: 528 KHYGCMVDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLGACRVHHHVDLAEESFQQLGK 587
Query: 451 IDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV 498
++P G ++L+NIY E +W++V +VR + K PG S I +
Sbjct: 588 MEPLRDGDYVLLSNIYAEAQRWNDVERVRSEMIGSGVPKKPGSSHIGI 635
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 153/385 (39%), Gaps = 85/385 (22%)
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSG-NDIGIARKLFDEM 176
P +L + + + I KSG +P V + +++ S S + A+ +F++
Sbjct: 113 PDLLSKLQQLSSVKEVEQTQCLITKSGLFNHPFVISKIISFLSLSPLGSLVYAQAIFEDT 172
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+ N MI Y + A L++ M +D+ + + + +
Sbjct: 173 AMDNPFVCNTMIRAYAKSVFPIKAIYLYNFMHRKDIK---------SDHFTYPFGLKACA 223
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
R+ +I+ Q+ + C G IH ++R GLD D FI N+L+ +Y
Sbjct: 224 RVLWCNEGDIKCTQLDIACK------------GAEIHCRLFRLGLDQDCFIQNSLVYLYS 271
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINS------------------------------- 325
+CG L AR FD ++K +TSWN MI++
Sbjct: 272 QCGFLDLARCVFDEMTEKTITSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNMLIAR 331
Query: 326 FALHGQSENSICVFEEM---------------MRCQDH-------------NIRPDGVTF 357
+ G+ E++ VF+EM ++ +D+ N+ +T
Sbjct: 332 YIRLGKIEDAKVVFQEMPERDAVSWNSMIAGYVQIKDYARALALFREMEIANVEATDITL 391
Query: 358 ISLLNACTHGGLVEQGRA-YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
IS+L AC G +E GR + L + Y+IE + + LVD+ + G A EV +
Sbjct: 392 ISVLGACAETGALEIGRKIHLSLKQREYKIEGYLSN--ALVDMYAKCGHLNLAWEVFSEL 449
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFA 441
K++ W +++ ++G + A
Sbjct: 450 KMKHIS-CWNAMIVSLAVHGYCEEA 473
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 164/452 (36%), Positives = 251/452 (55%), Gaps = 41/452 (9%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD ++ ++++I+A+A A A +R M+ G +P+ IYP K+C +
Sbjct: 82 VFDETPKKSSTTWSSVISAFAQNEA-PLLALQFFRRMLNDG-VRPDDHIYPSATKACGFL 139
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
S K VH VK+G+ V ++LV+ Y++ G +IG AR LFDEM +RNVVSW+ M
Sbjct: 140 RRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCG-EIGDARHLFDEMPERNVVSWSGM 198
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I GY ++ D A +LF DV
Sbjct: 199 IYGYAQLDDGVEALTLFKQALIEDVDV--------------------------------- 225
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
N T + + L+LGK+IHG + D SF+ +ALI +Y KCG ++ A +
Sbjct: 226 -NDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQV 284
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FD + L WNSM+ + A H ++ +FEEM + ++P+ ++F+S+L AC+H
Sbjct: 285 FDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEM---GNVGMKPNFISFLSVLYACSHA 341
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GLVE+GR YF LM + Y IEP+ EHY LVDLLGRAG+ +EA+ V+K M + P E VWG+
Sbjct: 342 GLVEKGREYFSLM-RDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGA 400
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LL GC+I+ T+ A F +++E+D ++ G ++L+N Y G+++E ++RKML+DR
Sbjct: 401 LLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGV 460
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
K G SW+E +VH F + D++H + EIY
Sbjct: 461 KKETGLSWVEEGNKVHTFTAGDRSHAKWVEIY 492
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 126/306 (41%), Gaps = 47/306 (15%)
Query: 39 LGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAF 98
+G S + YA K + AR +FD + N ++ MI YA Q A
Sbjct: 163 VGSSLVDMYA---------KCGEIGDARHLFDEMPERNVVSWSGMIYGYA-QLDDGVEAL 212
Query: 99 SLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNS 158
+L++ + N F + V++ C K++H +K F+ V +AL++
Sbjct: 213 TLFKQALIE-DVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISL 271
Query: 159 YSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSV 218
YS+ G G A ++FDE+ RN+ W NS+
Sbjct: 272 YSKCGVIEG-AYQVFDEIPTRNLGLW-------------------------------NSM 299
Query: 219 IAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR 278
+ C Q+ F MG + ++PN ++ + L A H G+++ G+ +
Sbjct: 300 LIACAQHAHTQRVFGLFEEMG---NVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRD 356
Query: 279 NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS-WNSMINSFALHGQSENSIC 337
G++ ++ +L+D+ G+ G L+EA + + S W +++ +H +E +
Sbjct: 357 YGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAF 416
Query: 338 VFEEMM 343
V + ++
Sbjct: 417 VADRIL 422
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 115/256 (44%), Gaps = 31/256 (12%)
Query: 238 MGMEVSDNIRPNQVTL-----------VC-ALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
M + S I+P+Q L +C L + + L+ G +H ++ + GL
Sbjct: 1 MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
+S+ LI++Y K + + FD KK T+W+S+I++FA Q+E + + R
Sbjct: 61 LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFA---QNEAPLLALQFFRRM 117
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT-YRIEPQIEHYGCLVDLLGRAG 404
+ +RPD + S AC + G++ L KT Y + + LVD+ + G
Sbjct: 118 LNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVG--SSLVDMYAKCG 175
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV----KKLIE-IDPNNGGYG 459
+A + M E + V W ++ G Y + D A+ + LIE +D N+ +
Sbjct: 176 EIGDARHLFDEMP-ERNVVSWSGMIYG---YAQLDDGVEALTLFKQALIEDVDVNDFTFS 231
Query: 460 IML----ANIYGELGK 471
++ ++ + ELGK
Sbjct: 232 SVIRVCSSSTFLELGK 247
>gi|108706388|gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 823
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 166/469 (35%), Positives = 265/469 (56%), Gaps = 54/469 (11%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP---QPNQFIYP 118
+ +A +FD + P+ ++Y +I A+ A A SLY M+RRG +P++ +P
Sbjct: 28 IAHAYLVFDQIPRPDRFMYNTLIRG-AAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFP 86
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
VL++C + VH +VK+G E V+ AL+ ++ GN +GIA LFD +
Sbjct: 87 FVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGN-LGIAAALFDGRAR 145
Query: 179 RNVVSWTAMISG-------------------------------YTRVGDIKNAASLFDSM 207
+ V+W+AMI+G Y + GD+ A LFD +
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQV 205
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFF---RRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
P+RDV +WN +I+G + G A+ F +RMG +P+ VT++ LSA +G
Sbjct: 206 PERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGE------KPDIVTMLSLLSACADSG 259
Query: 265 MLQLGKVIHGYV----YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
L +G+ +H + RNG + + NALIDMY KCGS+K A F K +++WN
Sbjct: 260 DLDVGQRLHSSLSDMFSRNGFPV--VLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWN 317
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
S++ ALHG SI +FE+M++ + +RPD +TF+++L AC+HGG+V++GR +F LM
Sbjct: 318 SIVGGLALHGHVLESIDMFEKMLKGK---VRPDEITFVAVLIACSHGGMVDKGREFFNLM 374
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
YR+EP I+HYGC+VD+LGRAG +EA E + MK EP+ V+W +LL+ C+++G +
Sbjct: 375 QHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIEL 434
Query: 441 AEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
A+ A ++L++ + G ++L+NIY +G+W K+RK++ D K
Sbjct: 435 AKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNK 483
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 124/303 (40%), Gaps = 62/303 (20%)
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM-GMEVSDNIRPNQVTL 253
G I +A +FD +P D +N++I G DA+S + RM +RP+++T
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL------------ 301
L A G G +H +V + G + D+F+ NALI M+ CG+L
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 145
Query: 302 -------------------KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM 342
AR FD K L SWN MI ++A G + +F+++
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQV 205
Query: 343 ---------------MRCQDH-------------NIRPDGVTFISLLNACTHGGLVEQGR 374
+RC H +PD VT +SLL+AC G ++ G+
Sbjct: 206 PERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQ 265
Query: 375 AYFKLMTKTY-RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
++ + R + L+D+ + G + A EV M+ + D W S++ G
Sbjct: 266 RLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMR-DKDVSTWNSIVGGLA 324
Query: 434 IYG 436
++G
Sbjct: 325 LHG 327
>gi|297844244|ref|XP_002890003.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335845|gb|EFH66262.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 471
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/374 (41%), Positives = 223/374 (59%), Gaps = 7/374 (1%)
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
E+ V+ +V Y GN + AR LFD+M R+V+SW ++ GY +GD++ +FD
Sbjct: 84 ERDIVLWNTMVAGYIEMGNMME-ARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFD 142
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
M +R+V +WN +I G QNG S+ + F+RM E S + PN TL LSA G
Sbjct: 143 EMLERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGS--VFPNDATLTLVLSACAKLGA 200
Query: 266 LQLGKVIHGYVYRNGLD-LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
GK +H Y G + +D + NALIDMYGKCG+++ A F ++ L SWN+MIN
Sbjct: 201 FDFGKRVHKYGENLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMIN 260
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
A HG ++ +F EM C I PD VTF+ +L AC H GLVE G AYF M +
Sbjct: 261 GLAAHGHGTEALDLFHEMKNC---GISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDF 317
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
I PQIEH GC+VDLL RAG +A+E + M ++ D V+W +LL K+Y + D E A
Sbjct: 318 SITPQIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDTGELA 377
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
+K+LI+++P N +ML+NIYG+ G++D+ +++ ++D K G SWIE D + +
Sbjct: 378 LKELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGISWIETDDGLVK 437
Query: 505 FHSLDKTHPRTEEI 518
F+S + HPRTEE+
Sbjct: 438 FYSSGEKHPRTEEL 451
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 9/204 (4%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + N + + +I YA Q S ++ MV G PN VL +C +
Sbjct: 140 VFDEMLERNVFSWNGLIKGYA-QNGRVSEVLGSFKRMVDEGSVFPNDATLTLVLSACAKL 198
Query: 128 LESRGTKMVHTQIVKSGFEQYPV-VETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
K VH G+ + V V+ AL++ Y + G I IA ++F + R+++SW
Sbjct: 199 GAFDFGKRVHKYGENLGYNKVDVNVKNALIDMYGKCGA-IEIAMEVFKGIKRRDLISWNT 257
Query: 187 MISGYTRVGDIKNAASLFDSMPD----RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
MI+G G A LF M + D + V+ C GL D +++F M +
Sbjct: 258 MINGLAAHGHGTEALDLFHEMKNCGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDF 317
Query: 243 SDNIRPNQVTLVCALSAIGHTGML 266
S I P C + + G L
Sbjct: 318 S--ITPQIEHCGCVVDLLSRAGFL 339
>gi|347954490|gb|AEP33745.1| chloroplast biogenesis 19, partial [Arabis hirsuta]
Length = 435
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/424 (38%), Positives = 248/424 (58%), Gaps = 13/424 (3%)
Query: 105 VRRGQPQPNQFIYPHVLKSCPDVL---ESRGTKMVHTQIVKSGFEQYPV-VETALVNSYS 160
+R +PN + +L D+L E+ G ++H K G ++ V V TA++ YS
Sbjct: 5 MRLAGVEPNHITFIALLSGWGDLLSGSEALG-DLLHGYACKLGLDRAHVMVGTAILGMYS 63
Query: 161 RSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIA 220
+ G AR +FD M ++N V+W MI GY R G + +A LFD MP+RD+ +W ++I
Sbjct: 64 KRGR-FRKARLVFDYMEEKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISWTAMIN 122
Query: 221 GCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG 280
G + G +A+++FR M + ++P+ V ++ AL+A + G L G IH YV
Sbjct: 123 GFVKKGFHEEALAWFREMQIS---GVKPDYVAIIAALAACTNLGALSFGLWIHRYVVSQD 179
Query: 281 LDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFE 340
+ +SN+LID+Y +CG ++ AR+ FD+ K+ + SWNS+I FA +G + S+ F
Sbjct: 180 FKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGHAHESLVYFR 239
Query: 341 EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL 400
+M Q+ +P+ VTF L AC H GLVE+G YF+ M + YRI P+IEHYGCLVDL
Sbjct: 240 KM---QEEGFKPNAVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRIEHYGCLVDLY 296
Query: 401 GRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG-RTDFAEFAVKKLIEIDPNNGGYG 459
RAGR E+AL+VV+ M ++P+EVV GSLL C+ G T AE +K L +++ +
Sbjct: 297 SRAGRLEDALKVVQSMPMKPNEVVIGSLLAACRTQGNNTVLAERVMKHLSDLNVKSHSNY 356
Query: 460 IMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
++L+N+Y GKW+ K+R+ +K K PG S IE+D H F + D TH T I
Sbjct: 357 VILSNMYAADGKWEGASKMRRKMKGLGLKKEPGFSSIEIDDCTHVFMAGDNTHVETTNIR 416
Query: 520 DALE 523
+ LE
Sbjct: 417 EVLE 420
>gi|357118743|ref|XP_003561109.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Brachypodium distachyon]
Length = 535
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/407 (38%), Positives = 244/407 (59%), Gaps = 21/407 (5%)
Query: 137 HTQIVKSGF--EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
H +VKSG P + +ALV+ Y++S + AR++FDEM R+ + A++S Y R
Sbjct: 110 HALLVKSGHFASGDPFLGSALVSFYAKS-RLLDEARRVFDEMPRRDTAVYNALLSAYARC 168
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G + A LF M +R+V +W ++++G QNG A+ F + M ++PN++T+
Sbjct: 169 GLVDAAEKLFGEMTERNVVSWTAMVSGYAQNGRHEAAVETF--LEMWEGAGVQPNELTVS 226
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
L A G ++LG + Y G + F++NAL++MY KCGS++ A + F +
Sbjct: 227 SVLPACAAVGAMELGTKVEEYARGKGHLGNVFVTNALLEMYAKCGSIQRAWQVFQGIGHR 286
Query: 315 R-LTSWNSMINSFALHGQSENSICVFEEM---MRCQDH------------NIRPDGVTFI 358
R L SWN+MI +FA+HG ++ +F ++ + C + ++PDG+TF+
Sbjct: 287 RDLCSWNTMIMAFAVHGLWMEALALFHKLRVRISCSNSLVYFFSIPTHMTGVKPDGITFV 346
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
++ ACTHGGLV++G+ F M + I P+IEHYGC+VDLLGRAG +EA ++ M
Sbjct: 347 GVILACTHGGLVDEGKLIFNSMEADFSINPRIEHYGCMVDLLGRAGLLKEAYSMIISMPA 406
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
EPD V+WG+LL C +G + AE AV KL+ ++P N ++L+NIY GKWD V +V
Sbjct: 407 EPDAVIWGALLGACSFHGNIELAETAVDKLMYLEPQNTANLVILSNIYASSGKWDGVAQV 466
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K+LK+++ K+ G S+IE+D ++H+F D +HP EEIY L+S+
Sbjct: 467 WKLLKEKDHKKSAGYSFIELDGRMHKFLVEDMSHPIFEEIYKTLDSV 513
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 127/309 (41%), Gaps = 63/309 (20%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A +F +T N +TAM++ YA H +A + +M QPN+ VL +C
Sbjct: 174 AEKLFGEMTERNVVSWTAMVSGYAQNGRH-EAAVETFLEMWEGAGVQPNELTVSSVLPAC 232
Query: 125 PDV-LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
V GTK V Y+R +G NV
Sbjct: 233 AAVGAMELGTK---------------------VEEYARGKGHLG------------NVFV 259
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPD-RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
A++ Y + G I+ A +F + RD+ +WN++I +GL+ +A++ F ++ + +
Sbjct: 260 TNALLEMYAKCGSIQRAWQVFQGIGHRRDLCSWNTMIMAFAVHGLWMEALALFHKLRVRI 319
Query: 243 S---------------DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
S ++P+ +T V + A H G++ GK+I N ++ D I
Sbjct: 320 SCSNSLVYFFSIPTHMTGVKPDGITFVGVILACTHGGLVDEGKLIF-----NSMEADFSI 374
Query: 288 S------NALIDMYGKCGSLKEA-RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFE 340
+ ++D+ G+ G LKEA ++ W +++ + + HG E + +
Sbjct: 375 NPRIEHYGCMVDLLGRAGLLKEAYSMIISMPAEPDAVIWGALLGACSFHGNIELAETAVD 434
Query: 341 EMMRCQDHN 349
++M + N
Sbjct: 435 KLMYLEPQN 443
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 182/531 (34%), Positives = 279/531 (52%), Gaps = 72/531 (13%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K L+ AR +FD + N +T+M+ Y + A L+ M P N
Sbjct: 97 IKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRN-GDVAEAERLFWHM-----PHKNVVS 150
Query: 117 YPHVL------------KSCPDVLESRGTKMVHTQI-----------VKSGFEQYP---- 149
+ +L + D++ + V I ++ F++ P
Sbjct: 151 WTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNV 210
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP- 208
V TA+V+ Y+R+G + +ARKLF+ M +RN VSWTAM+ GYT G ++ A+SLFD+MP
Sbjct: 211 VTWTAMVSGYARNGK-VDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPV 269
Query: 209 ------------------------------DRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
+RD W+++I + G +A+ FRRM
Sbjct: 270 KPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRM 329
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
E + N +L+ LS L GK +H + R+ D D ++++ LI MY KC
Sbjct: 330 QRE---GLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKC 386
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G+L A++ F+R K + WNSMI ++ HG E ++ VF +M C + PD VTFI
Sbjct: 387 GNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDM--CSS-GVPPDDVTFI 443
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
+L+AC++ G V++G F+ M Y++EP IEHY CLVDLLGRA + EA+++V+ M +
Sbjct: 444 GVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPM 503
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
EPD +VWG+LL C+ + + D AE AV+KL +++P N G ++L+N+Y G+W +V +
Sbjct: 504 EPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVL 563
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLD-KTHPRTEEIYDALESMVAL 528
R+ +K R+ K PGCSWIEV+K+VH F D K HP I LE + L
Sbjct: 564 REKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGL 614
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 170/429 (39%), Gaps = 123/429 (28%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
AIL RC + Q++ TT ++ YA C + L +AR +FD P+
Sbjct: 7 AILRRCMML----QVRLQCTT-----SSSYAIA----CYARNGQLDHARKVFDETPLPHR 53
Query: 78 YL--YTAMITAY--ASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
+ + AM+ AY A QP A L+ M +R N I H+
Sbjct: 54 TVSSWNAMVAAYFEARQP---REALLLFEKMPQRNTVSWNGLISGHI------------- 97
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
K+G + AR++FD M DRNVVSWT+M+ GY R
Sbjct: 98 --------KNGM--------------------LSEARRVFDTMPDRNVVSWTSMVRGYVR 129
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
GD+ A LF MP ++V +W ++ G Q G DA F M P +
Sbjct: 130 NGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMM---------PEK--- 177
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
D +I Y + G L EAR FD K
Sbjct: 178 ------------------------------DVVAVTNMIGGYCEEGRLDEARALFDEMPK 207
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ + +W +M++ +A +G+ + + +FE M + V++ ++L TH G + +
Sbjct: 208 RNVVTWTAMVSGYARNGKVDVARKLFEVMPERNE-------VSWTAMLLGYTHSGRMREA 260
Query: 374 RAYFKLMTKTYRIEPQIEHYGC--LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ F M ++P + C ++ G G ++A V KGMK E D W +++
Sbjct: 261 SSLFDAMP----VKPVVV---CNEMIMGFGLNGEVDKARRVFKGMK-ERDNGTWSAMI-- 310
Query: 432 CKIYGRTDF 440
K+Y R +
Sbjct: 311 -KVYERKGY 318
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 130/306 (42%), Gaps = 39/306 (12%)
Query: 188 ISGYTRVGDIKNAASLFDS--MPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
I+ Y R G + +A +FD +P R V +WN+++A + +A+ F +M
Sbjct: 29 IACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQR---- 84
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
N V+ +S GML + V+ D + +++ Y + G + EA
Sbjct: 85 ---NTVSWNGLISGHIKNGMLSEAR----RVFDTMPDRNVVSWTSMVRGYVRNGDVAEAE 137
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
R F K + SW M+ G+ +++ +F+ M D V +++
Sbjct: 138 RLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMM-------PEKDVVAVTNMIGGYC 190
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
G +++ RA F M K + + +V R G+ + A ++ + M E +EV W
Sbjct: 191 EEGRLDEARALFDEMPKR-----NVVTWTAMVSGYARNGKVDVARKLFEVMP-ERNEVSW 244
Query: 426 GSLLNGCKIYGR-----TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
++L G GR + F VK ++ + G+G+ G+ D+ R+V K
Sbjct: 245 TAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLN--------GEVDKARRVFK 296
Query: 481 MLKDRN 486
+K+R+
Sbjct: 297 GMKERD 302
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 20/202 (9%)
Query: 288 SNALIDMYGKCGSLKEARRAFDRNS--KKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
S+ I Y + G L AR+ FD + ++SWN+M+ ++ Q ++ +FE+M
Sbjct: 25 SSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKM--- 81
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
+ + V++ L++ G++ + R F M + + + +V R G
Sbjct: 82 ----PQRNTVSWNGLISGHIKNGMLSEARRVFDTMP-----DRNVVSWTSMVRGYVRNGD 132
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIM-LAN 464
EA + M + V W +L G GR D A +KL ++ P + +
Sbjct: 133 VAEAERLFWHMP-HKNVVSWTVMLGGLLQEGRVDDA----RKLFDMMPEKDVVAVTNMIG 187
Query: 465 IYGELGKWDEVRKVRKMLKDRN 486
Y E G+ DE R + + RN
Sbjct: 188 GYCEEGRLDEARALFDEMPKRN 209
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/342 (42%), Positives = 213/342 (62%), Gaps = 6/342 (1%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+A++ Y + G + A +F+ + ++D WNS+I C+QNG +AI+ FR+MGME
Sbjct: 400 SAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGME--- 456
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
R + V++ ALSA + L GK IHG + + L D + ++LIDMY KCG+L +
Sbjct: 457 GTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFS 516
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
RR FDR +K SWNS+I+++ HG + + +F EM+R + I+PD VTF+ +++AC
Sbjct: 517 RRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLR---NGIQPDHVTFLGIISAC 573
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
H G V++G Y+ LMT+ Y I ++EHY C+ D+ GRAGR EA E + M PD V
Sbjct: 574 GHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGV 633
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL C I+G + AE A K L ++DP N GY ++LAN+ GKW +V KVR ++K+
Sbjct: 634 WGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKE 693
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
R K PG SWIEV+ H F + D +HP T +IY L+S++
Sbjct: 694 RGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLL 735
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 179/379 (47%), Gaps = 46/379 (12%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
+L+ A+++FD++ ++ L+ M+ Y + +A ++ +M R + +PN + V
Sbjct: 108 HLSDAQYLFDNIPQKDSVLWNVMLNGYVKN-GDSGNAIKIFLEM-RHSEIKPNSVTFACV 165
Query: 121 LKSCP-DVLESRGTKMVHTQIVKSGFE-QYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
L C + + GT++ H V G E PV T
Sbjct: 166 LSVCASEAMLDLGTQL-HGIAVGCGLELDSPVANT------------------------- 199
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
+++ Y++ ++ A LFD++P D+ +WN +I+G QNGL +A FR M
Sbjct: 200 --------LLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGM 251
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
+S I+P+ +T L + L+ K IHGY+ R+ + LD F+ +ALID+Y KC
Sbjct: 252 ---ISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKC 308
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
++ A++ ++S +MI+ + L+G+++ ++ F +++ ++P VTF
Sbjct: 309 RDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ---ERMKPTSVTFS 365
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
S+ A + G+ + KT +++ + ++D+ + GR + A V +
Sbjct: 366 SIFPAFAGLAALNLGKELHGSIIKT-KLDEKCHVGSAILDMYAKCGRLDLACRVFNRIT- 423
Query: 419 EPDEVVWGSLLNGCKIYGR 437
E D + W S++ C GR
Sbjct: 424 EKDAICWNSMITSCSQNGR 442
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 40/305 (13%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
++ +L A+ +F L T + MI + + + A Y M+ G P+++
Sbjct: 3 VRTGSLKDAKNLFYTLQLGCTSAWNWMIRGF-TMMGQFNYALLFYLKMLGAGV-SPDKYT 60
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+P+V+K+C + + K+VH + G ++ V ++L+ Y+ +G+
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGH------------ 108
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+ +A LFD++P +D WN ++ G +NG +AI F
Sbjct: 109 --------------------LSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFL 148
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M I+PN VT C LS ML LG +HG GL+LDS ++N L+ MY
Sbjct: 149 EMR---HSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYS 205
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KC L+ AR+ FD + L SWN +I+ + +G + +F M+ I+PD +T
Sbjct: 206 KCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISA---GIKPDSIT 262
Query: 357 FISLL 361
F S L
Sbjct: 263 FASFL 267
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 161/374 (43%), Gaps = 42/374 (11%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L AR +FD L + + +I+ Y Q A L+R M+ G +P+ +
Sbjct: 206 KCQCLQAARKLFDTLPQSDLVSWNGIISGYV-QNGLMGEAEHLFRGMISAG-IKPDSITF 263
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
L ++L + K +H I++ +++AL++ Y + D+ +A+K + S
Sbjct: 264 ASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKC-RDVEMAQKNLCQSS 322
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+ V T MISGY NG +A+ FR
Sbjct: 323 SFDTVVCTTMISGYVL-------------------------------NGKNKEALEAFRW 351
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
+ V + ++P VT A L LGK +HG + + LD + +A++DMY K
Sbjct: 352 L---VQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAK 408
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG L A R F+R ++K WNSMI S + +G+ +I +F +M R D V+
Sbjct: 409 CGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGM---EGTRYDCVSI 465
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
L+AC + + G+ LM K + + L+D+ + G + V M+
Sbjct: 466 SGALSACANLPALHYGKEIHGLMIKG-PLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQ 524
Query: 418 IEPDEVVWGSLLNG 431
E +EV W S+++
Sbjct: 525 -EKNEVSWNSIISA 537
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 98/183 (53%), Gaps = 6/183 (3%)
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y R G +K+A +LF ++ AWN +I G T G F+ A+ F+ +M + + P++
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKM---LGAGVSPDK 58
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
T + A +++GK++H V GL D F+ ++LI +Y + G L +A+ FD
Sbjct: 59 YTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDN 118
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
+K WN M+N + +G S N+I +F EM + I+P+ VTF +L+ C ++
Sbjct: 119 IPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEM---RHSEIKPNSVTFACVLSVCASEAML 175
Query: 371 EQG 373
+ G
Sbjct: 176 DLG 178
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 115/278 (41%), Gaps = 39/278 (14%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L A +F+ +T + + +MIT+ SQ A +L+R M G I
Sbjct: 408 KCGRLDLACRVFNRITEKDAICWNSMITS-CSQNGRPGEAINLFRQMGMEGTRYDCVSI- 465
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
L +C ++ K +H ++K E++L++ Y++ GN + +R++FD M
Sbjct: 466 SGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGN-LNFSRRVFDRMQ 524
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
++N VSW ++IS Y GD+K +LF M
Sbjct: 525 EKNEVSWNSIISAYGNHGDLKECLALFHEM------------------------------ 554
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG-KVIHGYVYRNGLDLDSFISNALIDMYG 296
+ + I+P+ VT + +SA GH G + G + H G+ + DM+G
Sbjct: 555 ----LRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFG 610
Query: 297 KCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSE 333
+ G L EA + W +++ + +HG E
Sbjct: 611 RAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVE 648
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 13/175 (7%)
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
MY + GSLK+A+ F ++WN MI F + GQ ++ + +M+ + PD
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKML---GAGVSPD 57
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
TF ++ AC V+ G+ + ++ + L+ L G +A +
Sbjct: 58 KYTFPYVVKACCGLKSVKMGKIVHE-TVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLF 116
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI-----EIDPNNGGYGIMLA 463
+ + D V+W +LNG Y + + A+K + EI PN+ + +L+
Sbjct: 117 DNIP-QKDSVLWNVMLNG---YVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLS 167
>gi|145335647|ref|NP_172798.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|110741720|dbj|BAE98806.1| hypothetical protein [Arabidopsis thaliana]
gi|332190892|gb|AEE29013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 474
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/381 (39%), Positives = 228/381 (59%), Gaps = 7/381 (1%)
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
E+ V+ +++ Y GN + AR LFD+M R+V+SW ++ GY +GD++ +FD
Sbjct: 87 ERDIVLWNTMISGYIEMGNMLE-ARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFD 145
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
MP+R+V +WN +I G QNG S+ + F+RM E S + PN T+ LSA G
Sbjct: 146 DMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGS--VVPNDATMTLVLSACAKLGA 203
Query: 266 LQLGKVIHGYVYRNGLD-LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
GK +H Y G + +D + NALIDMYGKCG+++ A F ++ L SWN+MIN
Sbjct: 204 FDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMIN 263
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
A HG ++ +F EM ++ I PD VTF+ +L AC H GLVE G AYF M +
Sbjct: 264 GLAAHGHGTEALNLFHEM---KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDF 320
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
I P+IEH GC+VDLL RAG +A+E + M ++ D V+W +LL K+Y + D E A
Sbjct: 321 SIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVA 380
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
+++LI+++P N +ML+NIYG+ G++D+ +++ ++D K G SWIE D + +
Sbjct: 381 LEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVK 440
Query: 505 FHSLDKTHPRTEEIYDALESM 525
F+S + HPRTEE+ L +
Sbjct: 441 FYSSGEKHPRTEELQRILREL 461
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 9/204 (4%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + N + + +I YA Q S ++ MV G PN VL +C +
Sbjct: 143 VFDDMPERNVFSWNGLIKGYA-QNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKL 201
Query: 128 LESRGTKMVHTQIVKSGFEQYPV-VETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
K VH G+ + V V+ AL++ Y + G I IA ++F + R+++SW
Sbjct: 202 GAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGA-IEIAMEVFKGIKRRDLISWNT 260
Query: 187 MISGYTRVGDIKNAASLFDSMPDR----DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
MI+G G A +LF M + D + V+ C GL D +++F M +
Sbjct: 261 MINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDF 320
Query: 243 SDNIRPNQVTLVCALSAIGHTGML 266
S I P C + + G L
Sbjct: 321 S--IMPEIEHCGCVVDLLSRAGFL 342
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 89/236 (37%), Gaps = 65/236 (27%)
Query: 264 GMLQLGKVIHGY--VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNS 321
GML L VI V+ ++ + + ++I+ Y L ARR FD + ++ + WN+
Sbjct: 36 GMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNT 95
Query: 322 MINSFALHGQSENSICVFEEMMRCQD---HNIRPDGVTFISLLNACTH------------ 366
MI+ + G + +F++ M C+D N +G I + AC
Sbjct: 96 MISGYIEMGNMLEARSLFDQ-MPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFS 154
Query: 367 -----GGLVEQGR-----AYFKLMTKTYRIEPQ----------------------IEHYG 394
G + GR FK M + P + YG
Sbjct: 155 WNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYG 214
Query: 395 --------------CLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
L+D+ G+ G E A+EV KG+K D + W +++NG +G
Sbjct: 215 ETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK-RRDLISWNTMINGLAAHG 269
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/461 (35%), Positives = 260/461 (56%), Gaps = 22/461 (4%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + + + M+T Y + +A +L+ M R N + +
Sbjct: 14 ARDLFDKMPERDLFSWNVMLTGYV-RNRDLKTARALFERMPERDIVSWNAMLSGYAQNGF 72
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
D E+R ++ + +K+G + L+ +Y ++G I A++LF+ D +VSW
Sbjct: 73 VD--EAR--EIFYKMPLKNG-----ISWNGLLAAYVQNGR-IEDAKRLFESKMDWTLVSW 122
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
++ G+ R +LFD+MP RD +W+++IAG +QNG +A+ FF M D
Sbjct: 123 NCLMGGFVR-----KRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQ---RD 174
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
R N+ + CALS + L+LG+ +H + + G ++ NAL+ MY KCGS+ EA
Sbjct: 175 CERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEA 234
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R AF +K + SWN+MI+ +A HG E ++ VFE M + IRPD T +S+L AC
Sbjct: 235 RDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELM---KTTGIRPDDATMVSVLAAC 291
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLV+QG YF M + Y I ++ HY C+VDLLGRAG+ EEA ++K M EPD
Sbjct: 292 SHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAAT 351
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL +I+G T+ E A + + E++P+N G I+L+ +Y G+W + K+R +++
Sbjct: 352 WGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRN 411
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ K PG SW+EV ++H F D +HP T++IY LE M
Sbjct: 412 KGVKKVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEM 452
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 159/309 (51%), Gaps = 34/309 (11%)
Query: 155 LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA 214
+++ Y R+ + +AR LFD+M +R++ SW M++GY R D+K A +LF+ MP+RD+ +
Sbjct: 1 MISGYLRN-HKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVS 59
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
WN++++G QNG +A F +M ++ N ++ L+A G ++ K +
Sbjct: 60 WNAMLSGYAQNGFVDEAREIFYKMPLK-------NGISWNGLLAAYVQNGRIEDAKRL-- 110
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
+ + +D N L+ G +++ R FD ++ SW++MI ++ +G SE
Sbjct: 111 --FESKMDWTLVSWNCLMG-----GFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEE 163
Query: 335 SICVFEEMMR-CQDHNIRPDGVTFISLLNACTHGGLVEQGRA-YFKLMTKTYRIEPQIEH 392
++ F EM R C+ R + +F L+ C++ +E GR + +L+ Y+ + +
Sbjct: 164 ALHFFVEMQRDCE----RLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGN 219
Query: 393 YGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAE-----FAVKK 447
L+ + + G +EA + + + +E D V W ++++G Y R F E F + K
Sbjct: 220 --ALLAMYCKCGSIDEARDAFQEI-LEKDVVSWNTMIHG---YARHGFGEEALTVFELMK 273
Query: 448 LIEIDPNNG 456
I P++
Sbjct: 274 TTGIRPDDA 282
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/520 (34%), Positives = 277/520 (53%), Gaps = 66/520 (12%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
++ AR FD + N +TAM+ Y Q S A +L+ M P+ N + +L
Sbjct: 94 VSEARKAFDTMPERNVVSWTAMVRGYV-QEGLVSEAETLFWQM-----PEKNVVSWTVML 147
Query: 122 KSCPDVL---ESRG-------------TKMV-------HTQIVKSGFEQYP----VVETA 154
V E+RG T M+ + F++ P + T
Sbjct: 148 GGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTT 207
Query: 155 LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA 214
+++ Y ++G + +ARKLF+ M ++N VSWTAM+ GYT+ G I+ A+ LFD+MP + V A
Sbjct: 208 MISGYVQNGQ-VDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVA 266
Query: 215 WNSVIAGCTQNG------------------LFSDAISFFRRMGMEVS----------DNI 246
N++I G QNG +S I + R G EV + +
Sbjct: 267 CNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGV 326
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
+ N +L+ LS L G+ +H + ++ D D F+++ LI MY KCG L +AR+
Sbjct: 327 QSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQ 386
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
FDR S K + WNS+I +A HG E ++ VF EM C + DGVTF+ +L+AC++
Sbjct: 387 IFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEM--CSS-GMATDGVTFVGVLSACSY 443
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
G V++G F+ M Y +EP+ EHY C+VDLLGRAG +A+++++ M +E D ++WG
Sbjct: 444 TGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWG 503
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+LL C+ + + AE A KKL++++P N G I+L+NIY G+W +V ++R+ ++ +
Sbjct: 504 ALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKK 563
Query: 487 AYKTPGCSWIEVDKQVHQFH-SLDKTHPRTEEIYDALESM 525
K+PGCSWIEV+K+VH F + HP I LE +
Sbjct: 564 VSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKL 603
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 131/278 (47%), Gaps = 39/278 (14%)
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
AR LFD+M +RN VSW +ISGY + + A FD+MP+R+V +W +++ G Q GL
Sbjct: 66 ARYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLV 125
Query: 229 SDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL----D 284
S+A + F +M N V+ L G++Q+ ++ R D+ D
Sbjct: 126 SEAETLFWQMP-------EKNVVSWTVMLG-----GLIQVRRIDEA---RGLFDIMPVKD 170
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
+I Y + G L EAR FD ++ + SW +MI+ + +GQ + + +FE M
Sbjct: 171 VVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPE 230
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL--GR 402
+ V++ ++L T GG +E+ F M P C +L G+
Sbjct: 231 KNE-------VSWTAMLMGYTQGGRIEEASELFDAM-------PVKAVVACNAMILGFGQ 276
Query: 403 AGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
G +A +V ++ E D+ W +++ K+Y R F
Sbjct: 277 NGEVAKARQVFDQIR-EKDDGTWSAMI---KVYERKGF 310
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/342 (41%), Positives = 214/342 (62%), Gaps = 6/342 (1%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+A++ Y + G + A +F+ + ++D WNS+I C+QNG +AI+ FR+MGME
Sbjct: 400 SAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGME--- 456
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
R + V++ ALSA + L GK IHG + + L D + ++LIDMY KCG+L +
Sbjct: 457 GTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFS 516
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
RR FDR ++ SWNS+I+++ HG + + +F EM+R + I+PD VTF+ +++AC
Sbjct: 517 RRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLR---NGIQPDHVTFLGIISAC 573
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
H G V++G Y+ LMT+ Y I ++EHY C+ D+ GRAGR +EA E + M PD V
Sbjct: 574 GHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGV 633
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL C I+G + AE A K L ++DP N GY ++LAN+ GKW +V KVR ++K+
Sbjct: 634 WGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKE 693
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
R K PG SWIEV+ H F + D +HP T +IY L+S++
Sbjct: 694 RGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLL 735
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 178/379 (46%), Gaps = 46/379 (12%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
+L+ A+++FD++ ++ L+ M+ Y + +A ++ +M R + +PN + V
Sbjct: 108 HLSDAQYLFDNIPQKDSVLWNVMLNGYVKN-GDSGNAIKIFLEM-RHSEIKPNSVTFACV 165
Query: 121 LKSCP-DVLESRGTKMVHTQIVKSGFE-QYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
L C + + GT++ H V G E PV T
Sbjct: 166 LSVCASEAMLDLGTQL-HGIAVSCGLELDSPVANT------------------------- 199
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
+++ Y++ ++ A LFD+ P D+ +WN +I+G QNGL +A FR M
Sbjct: 200 --------LLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGM 251
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
+S I+P+ +T L + L+ K IHGY+ R+ + LD F+ +ALID+Y KC
Sbjct: 252 ---ISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKC 308
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
++ A++ ++S +MI+ + L+G+++ ++ F +++ ++P VTF
Sbjct: 309 RDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ---ERMKPTSVTFS 365
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
S+ A + G+ + KT +++ + ++D+ + GR + A V +
Sbjct: 366 SIFPAFAGLAALNLGKELHGSIIKT-KLDEKCHVGSAILDMYAKCGRLDLACRVFNRIT- 423
Query: 419 EPDEVVWGSLLNGCKIYGR 437
E D + W S++ C GR
Sbjct: 424 EKDAICWNSMITSCSQNGR 442
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 141/305 (46%), Gaps = 40/305 (13%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
++ +L A+ +F L T + MI + + + A Y M+ G P+++
Sbjct: 3 VRTGSLKDAKNLFYTLQLGCTSAWNWMIRGF-TMMGQFNYALLFYLKMLGAGV-SPDKYT 60
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+P+V+K+C + + K+VH + G ++ V ++L+ Y+ +G+
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGH------------ 108
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+ +A LFD++P +D WN ++ G +NG +AI F
Sbjct: 109 --------------------LSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFL 148
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M I+PN VT C LS ML LG +HG GL+LDS ++N L+ MY
Sbjct: 149 EMR---HSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYS 205
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KC L+ AR+ FD + + L SWN +I+ + +G + +F M+ I+PD +T
Sbjct: 206 KCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISA---GIKPDSIT 262
Query: 357 FISLL 361
F S L
Sbjct: 263 FASFL 267
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 165/376 (43%), Gaps = 46/376 (12%)
Query: 58 KLSNLTYARFIFDHLTTPNTYL--YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQF 115
K L AR +FD T+P + L + +I+ Y Q A L+R M+ G +P+
Sbjct: 206 KCQCLQAARKLFD--TSPQSDLVSWNGIISGYV-QNGLMGEAEHLFRGMISAG-IKPDSI 261
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
+ L ++L + K +H I++ +++AL++ Y + D+ +A+K+ +
Sbjct: 262 TFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKC-RDVEMAQKILCQ 320
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
S + V T MISGY NG +A+ F
Sbjct: 321 SSSFDTVVCTTMISGYVL-------------------------------NGKNKEALEAF 349
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
R + V + ++P VT A L LGK +HG + + LD + +A++DMY
Sbjct: 350 RWL---VQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMY 406
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCG L A R F+R ++K WNSMI S + +G+ +I +F +M R D V
Sbjct: 407 AKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGM---EGTRYDCV 463
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
+ L+AC + + G+ LM K + + L+D+ + G + V
Sbjct: 464 SISGALSACANLPALHYGKEIHGLMIKG-PLRSDLYAESSLIDMYAKCGNLNFSRRVFDR 522
Query: 416 MKIEPDEVVWGSLLNG 431
M+ E +EV W S+++
Sbjct: 523 MQ-ERNEVSWNSIISA 537
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 98/183 (53%), Gaps = 6/183 (3%)
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y R G +K+A +LF ++ AWN +I G T G F+ A+ F+ +M + + P++
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKM---LGAGVSPDK 58
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
T + A +++GK++H V GL D F+ ++LI +Y + G L +A+ FD
Sbjct: 59 YTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDN 118
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
+K WN M+N + +G S N+I +F EM + I+P+ VTF +L+ C ++
Sbjct: 119 IPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEM---RHSEIKPNSVTFACVLSVCASEAML 175
Query: 371 EQG 373
+ G
Sbjct: 176 DLG 178
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 115/278 (41%), Gaps = 39/278 (14%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L A +F+ +T + + +MIT+ SQ A +L+R M G I
Sbjct: 408 KCGRLDLACRVFNRITEKDAICWNSMITS-CSQNGRPGEAINLFRQMGMEGTRYDCVSI- 465
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
L +C ++ K +H ++K E++L++ Y++ GN + +R++FD M
Sbjct: 466 SGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGN-LNFSRRVFDRMQ 524
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+RN VSW ++IS Y GD+K +LF M
Sbjct: 525 ERNEVSWNSIISAYGNHGDLKECLALFHEM------------------------------ 554
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG-KVIHGYVYRNGLDLDSFISNALIDMYG 296
+ + I+P+ VT + +SA GH G + G + H G+ + DM+G
Sbjct: 555 ----LRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFG 610
Query: 297 KCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSE 333
+ G L EA + W +++ + +HG E
Sbjct: 611 RAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVE 648
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
MY + GSLK+A+ F ++WN MI F + GQ ++ + +M+ + PD
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKML---GAGVSPD 57
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
TF ++ AC V+ G+ + + ++ + L+ L G +A +
Sbjct: 58 KYTFPYVVKACCGLKSVKMGKIVHETVN-LMGLKEDVFVGSSLIKLYAENGHLSDAQYLF 116
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI-----EIDPNNGGYGIMLA 463
+ + D V+W +LNG Y + + A+K + EI PN+ + +L+
Sbjct: 117 DNIP-QKDSVLWNVMLNG---YVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLS 167
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 170/499 (34%), Positives = 262/499 (52%), Gaps = 50/499 (10%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYL 79
L R H + +K + TT + + YA K L A +FD ++
Sbjct: 16 LGRAVHGSGVKACVHWKTTFCNTLLDMYA---------KCGVLDGAILVFDLMSVRTVVT 66
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
+T++I AYA + + A L+ +M R G P+ F VL +C K VH
Sbjct: 67 WTSLIAAYARE-GLSDEAIRLFHEMDREGV-SPDIFTITTVLHACACNGSLENGKDVHNY 124
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
I + ND+ N+ A++ Y + G +++
Sbjct: 125 IRE---------------------NDM-----------QSNIFVCNALMDMYAKCGSMED 152
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
A S+F MP +D+ +WN++I G ++N L ++A+S F M +E ++P+ TL C L A
Sbjct: 153 ANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE----MKPDGTTLACILPA 208
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSW 319
L GK +HG++ RNG D ++NAL+DMY KCG AR FD K L +W
Sbjct: 209 CASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITW 268
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
MI + +HG N+I F EM + I PD V+FIS+L AC+H GL+++G +F +
Sbjct: 269 TVMIAGYGMHGFGNNAITTFNEM---RQAGIEPDEVSFISILYACSHSGLLDEGWRFFNV 325
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
M ++P++EHY C+VDLL R+G+ A + +K M IEPD +WG+LL+GC+I+
Sbjct: 326 MQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVK 385
Query: 440 FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVD 499
AE + + E++P N GY ++LAN Y E KW+EV+K+R+ + R K PGCSWIEV
Sbjct: 386 LAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVK 445
Query: 500 KQVHQFHSLDKTHPRTEEI 518
+VH F + + +HP+ ++I
Sbjct: 446 SKVHIFLAGNSSHPQAKKI 464
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 5/179 (2%)
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
+V L A + G + LG+ +HG + + + N L+DMY KCG L A FD S
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+ + +W S+I ++A G S+ +I +F EM R + PD T ++L+AC G +E
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDR---EGVSPDIFTITTVLHACACNGSLEN 117
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
G+ + + ++ I L+D+ + G E+A V M ++ D + W +++ G
Sbjct: 118 GKDVHNYIREN-DMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIGG 174
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 158/470 (33%), Positives = 262/470 (55%), Gaps = 42/470 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K +++ AR IFD + + +MI Y Q A A +++ M+ G QP
Sbjct: 178 KCGSVSIARVIFDGMDHRTVVSWNSMIDGYV-QSGDAEGAMLIFQKMLDEG-VQPTNVTV 235
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
L +C D+ + K VH KL D++
Sbjct: 236 MGALHACADLGDLERGKFVH---------------------------------KLVDQLK 262
Query: 178 -DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
D +V ++IS Y++ + AA +F ++ ++ + +WN++I G QNG ++A++ F
Sbjct: 263 LDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFC 322
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M S NI+P+ T+V + A+ + + K IHG V R LD + F+ AL+DMY
Sbjct: 323 EMQ---SRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYA 379
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG++ AR+ FD + + + +WN+MI+ + HG + S+ +F+EM + I+P+ +T
Sbjct: 380 KCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEM---KKGTIKPNDIT 436
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
F+ L+AC+H GLVE+G +F+ M K Y IEP ++HYG +VDLLGRAGR +A + ++ M
Sbjct: 437 FLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKM 496
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
I+P V+G++L CKI+ D E A ++ +++P++GGY ++LANIY W +V
Sbjct: 497 PIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVA 556
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
KVR +++ KTPGCS +E+ +VH F+S +HP++++IY LE++V
Sbjct: 557 KVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLV 606
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 180/370 (48%), Gaps = 45/370 (12%)
Query: 83 MITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVK 142
M+ YA + + SA S + M + +P + + ++LK C D + + K +H ++
Sbjct: 1 MLKGYA-KSSSLDSALSFFSRM-KHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVIT 58
Query: 143 SGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAAS 202
SGF N+ + T +++ Y + I +A +
Sbjct: 59 SGFSW--------------------------------NLFAMTGVVNMYAKCRQINDAYN 86
Query: 203 LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGH 262
+FD MP+RD+ WN++I+G QNG A+ RM E RP+ +T+V L A+
Sbjct: 87 MFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEE---GHRPDSITIVSILPAVAD 143
Query: 263 TGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSM 322
T +L++G +HGYV R G + +S AL+DMY KCGS+ AR FD + + SWNSM
Sbjct: 144 TRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSM 203
Query: 323 INSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK 382
I+ + G +E ++ +F++M+ D ++P VT + L+AC G +E+G+ KL+ +
Sbjct: 204 IDGYVQSGDAEGAMLIFQKML---DEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQ 260
Query: 383 TYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK----IEPDEVVWGSLLNGCKIYGRT 438
+++ + L+ + + R + A ++ K ++ + + ++ G NGC
Sbjct: 261 -LKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALN 319
Query: 439 DFAEFAVKKL 448
F E + +
Sbjct: 320 AFCEMQSRNI 329
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 112/240 (46%), Gaps = 10/240 (4%)
Query: 218 VIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVY 277
++ G ++ A+SFF RM D++RP L G L+ GK IHG V
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMK---HDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVI 57
Query: 278 RNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSIC 337
+G + F +++MY KC + +A FDR ++ L WN+MI+ +A +G ++ ++
Sbjct: 58 TSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALM 117
Query: 338 VFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLV 397
+ ++R + RPD +T +S+L A L+ G A + + E + LV
Sbjct: 118 L---VLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRA-GFESLVNVSTALV 173
Query: 398 DLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNN 455
D+ + G A + GM V W S+++G G + A +K+++ + P N
Sbjct: 174 DMYSKCGSVSIARVIFDGMD-HRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTN 232
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 173/521 (33%), Positives = 282/521 (54%), Gaps = 47/521 (9%)
Query: 14 QQVLAIL-ERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYA-RFIF-- 69
Q +L +L CN ++ L Q+ +F+ G Q N + L+++ YA F+F
Sbjct: 18 QTILTLLNSHCNTLSKLTQIHAFILKTGL-QNNPLILTKFTSTSSNLNSIHYATSFLFPP 76
Query: 70 DHLT---TP--NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
H T TP + +L+ +I AY+ S++F YR M+R G PN+F +P VLK C
Sbjct: 77 SHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGV-TPNKFTFPFVLKGC 135
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ R K VH +VK GFE+ V L++ Y G D
Sbjct: 136 AGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGED------------------- 176
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+ A +FD P D W+++IAG + G S A+ FR M +
Sbjct: 177 -----------GFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVM--- 222
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ P+++T+V LSA G L+LGK + YV + + + NALIDM+ KCG++ +A
Sbjct: 223 GVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKA 282
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ F + + + SW S+I A+HG+ +++ +F+EM+ ++ I PD V FI +L+AC
Sbjct: 283 IKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMV---ENGITPDDVAFIGVLSAC 339
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLV++GR YF M + + I P++EHYGC+VDLL R G +EA E V+ M EP++++
Sbjct: 340 SHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQII 399
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
W +++ C G E K+LI+ +P + ++L+NIY +L +W++ KVR+M+
Sbjct: 400 WRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDM 459
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
R K PG + IEV+ ++++F + DK+H + +EIY+ ++ M
Sbjct: 460 RGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEM 500
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 284/530 (53%), Gaps = 50/530 (9%)
Query: 3 SVTNQLNQTLNQQVLAILERCNHINHLKQL--QSFLTTLGQSQTNFYAF-KLVRFCTLKL 59
+++N + T ++++L L C I+ LKQL Q+ TT F+ + +++ F +L
Sbjct: 16 AISNSDSFTHHRRLLLFLNSCTCISQLKQLHAQTIRTTSSHHPNTFFLYSRILHFSSLH- 74
Query: 60 SNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPH 119
+L YA +F + PN++++ A+I A A A +LY M+ +G ++ +P
Sbjct: 75 -DLRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPF 133
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
VLK+C + + +H QI+K GF+ + +LV+ Y+ DR
Sbjct: 134 VLKACAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFYA---------------TCDR 178
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
+ A +FD M +R + +WN VI + G F A++ F
Sbjct: 179 -----------------LDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFG--- 218
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS----FISNALIDMY 295
E+ P+ T+ +A G L LG H ++ + D D ++ +L+DMY
Sbjct: 219 -EMQKFFEPDGYTIQSIANACAGMGSLSLGMWAHVFLLKK-FDADRVNDVLLNTSLVDMY 276
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCGSL+ A + F R K+ +TSWNSMI F+ HG+ ++ F M+R + + P+ +
Sbjct: 277 CKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTE--KLMPNAI 334
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF+ +L+AC HGGLV +GR YF +M Y+I+P++EHYGCLVDLL RAG +EAL+VV
Sbjct: 335 TFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSN 394
Query: 416 MKIEPDEVVWGSLLNG-CKIYGRTDFAEFAVKKLIEIDPN-NGGYGIMLANIYGELGKWD 473
M + PD V+W SLL+ CK + +E ++++E + G ++L+ +Y +W+
Sbjct: 395 MPMRPDLVIWRSLLDACCKQNAGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASASRWN 454
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
+V VRK++ D+ K PGCS IE+D H+F + D +HP+TEEIY AL+
Sbjct: 455 DVGMVRKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHPQTEEIYSALD 504
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/523 (32%), Positives = 281/523 (53%), Gaps = 43/523 (8%)
Query: 6 NQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL--SNLT 63
++++ Q + ++ +CN + L Q+Q++ +F A KL+ FCT S+++
Sbjct: 22 SKIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVA-KLINFCTESPTESSMS 80
Query: 64 YARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
YAR +F+ ++ P+ ++ +M Y S+ + FSL+ +++ G P+ + +P +LK+
Sbjct: 81 YARHLFEAMSEPDIVIFNSMARGY-SRFTNPLEVFSLFVEILEDGI-LPDNYTFPSLLKA 138
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
C + +H +K G D NV
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGL--------------------------------DDNVYV 166
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
+I+ YT D+ +A +FD + + V +N++I G + ++A+S FR M
Sbjct: 167 CPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ---G 223
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
++PN++TL+ LS+ G L LGK IH Y ++ ++ ALIDM+ KCGSL +
Sbjct: 224 KYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDD 283
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A F++ K +W++MI ++A HG++E S+ +FE M + N++PD +TF+ LLNA
Sbjct: 284 AVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERM---RSENVQPDEITFLGLLNA 340
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C+H G VE+GR YF M + I P I+HYG +VDLL RAG E+A E + + I P +
Sbjct: 341 CSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPM 400
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+W LL C + D AE +++ E+D ++GG ++L+N+Y KW+ V +RK++K
Sbjct: 401 LWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMK 460
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
DR A K PGCS IEV+ VH+F S D T +++ AL+ MV
Sbjct: 461 DRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMV 503
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/514 (32%), Positives = 273/514 (53%), Gaps = 40/514 (7%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
+L + + ++ + KQ+ ++ S F L+ K ++ A+ IF
Sbjct: 344 SSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALID-AYFKCRGVSMAQNIFSQCN 402
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
+ + ++TAMI+ Y + S ++R +V+ + PN+ +L +L +
Sbjct: 403 SVDVVVFTAMISGYLHNGLYIDS-LEMFRWLVKV-KISPNEITLVSILPVIGILLALKLG 460
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+ +H I+K GF+ +IG A+I Y +
Sbjct: 461 RELHGFIIKKGFDNR---------------CNIG-----------------CAVIDMYAK 488
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
G + A +F+ + RD+ +WNS+I C Q+ S AI FR+MG+ I + V++
Sbjct: 489 CGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS---GICYDCVSI 545
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
ALSA + GK IHG++ ++ L D + + LIDMY KCG+LK A F +
Sbjct: 546 SAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKE 605
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K + SWNS+I + HG+ ++S+C+F EM+ + IRPD +TF+ ++++C H G V++G
Sbjct: 606 KNIVSWNSIIAACGNHGKLKDSLCLFHEMV--EKSGIRPDQITFLEIISSCCHVGDVDEG 663
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
+F+ MT+ Y I+PQ EHY C+VDL GRAGR EA E VK M PD VWG+LL C+
Sbjct: 664 VRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACR 723
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
++ + AE A KL+++DP+N GY ++++N + +W+ V KVR ++K+R K PG
Sbjct: 724 LHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGY 783
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
SWIE++K+ H F S D HP + IY L S++
Sbjct: 784 SWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLG 817
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 179/404 (44%), Gaps = 49/404 (12%)
Query: 32 LQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQP 91
L +++LG F A L++ L+ + +FD + + ++ M+ YA
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIK-AYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 92 AHAS--SAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
A S FS+ +R Q PN + VL C L +H +V SG +
Sbjct: 219 ALDSVIKGFSV----MRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
++ +L++ YS+ G A KLF MS + V+W MISGY
Sbjct: 275 SIKNSLLSMYSKCGR-FDDASKLFRMMSRADTVTWNCMISGY------------------ 315
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
Q+GL ++++FF M +S + P+ +T L ++ L+
Sbjct: 316 -------------VQSGLMEESLTFFYEM---ISSGVLPDAITFSSLLPSVSKFENLEYC 359
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
K IH Y+ R+ + LD F+++ALID Y KC + A+ F + + + + +MI+ + +
Sbjct: 360 KQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHN 419
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
G +S+ +F +++ + I P+ +T +S+L ++ GR + K +
Sbjct: 420 GLYIDSLEMFRWLVKVK---ISPNEITLVSILPVIGILLALKLGRELHGFIIK--KGFDN 474
Query: 390 IEHYGC-LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
+ GC ++D+ + GR A E+ + + + D V W S++ C
Sbjct: 475 RCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRC 517
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 153/360 (42%), Gaps = 48/360 (13%)
Query: 8 LNQTLNQQVLAILERCNHINHL---KQLQSFL---TTLGQSQTNFYAFKLVRFCTLKLSN 61
L +T+ +++ +L+ C++ N L KQ+ +FL + G S T+ + C S+
Sbjct: 30 LEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCG-SFSD 88
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
+ D L + + ++I+++ + + A + Y M+ G P+ +P ++
Sbjct: 89 CGKMFYRLD-LRRSSIRPWNSIISSFV-RNGLLNQALAFYFKMLCFGV-SPDVSTFPCLV 145
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
K+C + +G + + G D N
Sbjct: 146 KACVALKNFKGIDFLSDTVSSLGM--------------------------------DCNE 173
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
+++I Y G I + LFD + +D WN ++ G + G I F M M
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRM- 232
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
D I PN VT C LS ++ LG +HG V +G+D + I N+L+ MY KCG
Sbjct: 233 --DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRF 290
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+A + F S+ +WN MI+ + G E S+ F EM+ + PD +TF SLL
Sbjct: 291 DDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMI---SSGVLPDAITFSSLL 347
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 120/259 (46%), Gaps = 14/259 (5%)
Query: 174 DEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
D +D ++ AM ++ G + L S + WNS+I+ +NGL + A++
Sbjct: 69 DSYTDERILGMYAMCGSFSDCGKMFYRLDLRRS----SIRPWNSIISSFVRNGLLNQALA 124
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
F+ +M + + P+ T C + A + + V G+D + F++++LI
Sbjct: 125 FYFKM---LCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIK 181
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
Y + G + + FDR +K WN M+N +A G ++ I F M Q I P+
Sbjct: 182 AYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ---ISPN 238
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKT-YRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
VTF +L+ C L++ G L+ + E I++ L+ + + GRF++A ++
Sbjct: 239 AVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN--SLLSMYSKCGRFDDASKL 296
Query: 413 VKGMKIEPDEVVWGSLLNG 431
+ M D V W +++G
Sbjct: 297 FRMMS-RADTVTWNCMISG 314
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 11/220 (5%)
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P +++L+ L A + +L+ GK +H ++ N + DS+ ++ MY CGS + +
Sbjct: 35 PRRLSLL--LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKM 92
Query: 308 FDRNSKKR--LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
F R +R + WNS+I+SF +G ++ + +M+ C + PD TF L+ AC
Sbjct: 93 FYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKML-C--FGVSPDVSTFPCLVKACV 149
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
+G + + ++ L+ G+ + ++ + ++ D V+W
Sbjct: 150 ALKNF-KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV-LQKDCVIW 207
Query: 426 GSLLNGCKIYGRTD--FAEFAVKKLIEIDPNNGGYGIMLA 463
+LNG G D F+V ++ +I PN + +L+
Sbjct: 208 NVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLS 247
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/458 (34%), Positives = 268/458 (58%), Gaps = 9/458 (1%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + + M+ +Y Q + A + M G +Q I VL +C
Sbjct: 124 ARKVFDGMAVRDVVSWGVMLDSYC-QTRNYKEALLQFAKMKNSGVLS-DQLILATVLSAC 181
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ R K +H+ ++ S + +AL+N Y+ S + +A KL++ M +++VS
Sbjct: 182 GHIRHLRTGKSIHSYMLVSDILINAHLSSALINLYA-SCASMEMAEKLYNGMPRKDLVSS 240
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
TAM+ GY R + A +FD MP++DV +W+++I+G + ++A+S F M
Sbjct: 241 TAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFNDMQ---EC 297
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
IRP++VT++ +SA + G L K IH ++ NGL+ I NALIDM+ KCG + A
Sbjct: 298 GIRPDEVTMLSVISACANLGSLDKAKWIHAFIKNNGLNKILHICNALIDMFAKCGGINLA 357
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F+ +K + +W SMI +FA+HG ++++C+FE+M ++ + P+ VTF++LL AC
Sbjct: 358 LNIFNEMPQKNVITWTSMITAFAMHGDGKSALCLFEQM---RNEGVEPNEVTFLNLLYAC 414
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
H GLV +GR+ F M + Y IEP+ EHYGC+VDLLGRA +EA+ +++ M + P+ V
Sbjct: 415 CHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVNLIESMHLRPNVPV 474
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WGSLL C ++G FA KK++++DPN+ G ++L+ IY + ++ ++VR ++K
Sbjct: 475 WGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASVLLSKIYMKSDNLNDAQEVRDVMKL 534
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+ K G SW+++++ H+F + + +P ++I+ L
Sbjct: 535 QGVSKETGLSWMDLNEPFHEFTAGGEKYPENDKIFQKL 572
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 180/421 (42%), Gaps = 82/421 (19%)
Query: 73 TTPNTYL-----YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+ P T+L Y A I A A+ P +A + R R G P P P +L+S
Sbjct: 26 SPPTTHLDPDRAYLATIRAAATTPRLVLAACACLR---RTGLPPPGPRALPALLRSAARC 82
Query: 128 LESRG-TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
+ + + H + G V TALV +Y+ G +G ARK+FD M+ R+VVSW
Sbjct: 83 VGAGAYVRGAHALAFRVGSLDDGFVRTALVGAYAACGC-VGDARKVFDGMAVRDVVSWGV 141
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
M+ Y + + K A F M + +G+ SD
Sbjct: 142 MLDSYCQTRNYKEALLQFAKMKN---------------SGVLSD---------------- 170
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE--- 303
Q+ L LSA GH L+ GK IH Y+ + + +++ +S+ALI++Y C S++
Sbjct: 171 ---QLILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAEK 227
Query: 304 ----------------------------ARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
AR FD +K + SW++MI+ +A Q +
Sbjct: 228 LYNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEA 287
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ +F +M C IRPD VT +S+++AC + G +++ + + K + +
Sbjct: 288 LSLFNDMQEC---GIRPDEVTMLSVISACANLGSLDKAK-WIHAFIKNNGLNKILHICNA 343
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY--GRTDFAEFAVKKLIEIDP 453
L+D+ + G AL + M + + + W S++ ++ G++ F + ++P
Sbjct: 344 LIDMFAKCGGINLALNIFNEMP-QKNVITWTSMITAFAMHGDGKSALCLFEQMRNEGVEP 402
Query: 454 N 454
N
Sbjct: 403 N 403
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 153/356 (42%), Gaps = 77/356 (21%)
Query: 13 NQQVLA-ILERCNHINHL---KQLQSFLTT--------LGQSQTNFYAFKLVRFCTLKLS 60
+Q +LA +L C HI HL K + S++ L + N YA KL
Sbjct: 170 DQLILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAEKLY 229
Query: 61 N----------------------LTYARFIFDHLTTPNTYLYTAMITAYA--SQPAHASS 96
N AR+IFD + + ++AMI+ YA +QP +
Sbjct: 230 NGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQP---NE 286
Query: 97 AFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALV 156
A SL+ DM G +P++ V+ +C ++ K +H I +G + + AL+
Sbjct: 287 ALSLFNDMQECGI-RPDEVTMLSVISACANLGSLDKAKWIHAFIKNNGLNKILHICNALI 345
Query: 157 NSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWN 216
+ +++ G I +A +F+EM +NV++WT+MI+ + GD K+A LF+ M
Sbjct: 346 DMFAKCGG-INLALNIFNEMPQKNVITWTSMITAFAMHGDGKSALCLFEQM--------- 395
Query: 217 SVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK-VIHGY 275
R G+E PN+VT + L A H G++ G+ +
Sbjct: 396 -------------------RNEGVE------PNEVTFLNLLYACCHAGLVHEGRSLFSSM 430
Query: 276 VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR-NSKKRLTSWNSMINSFALHG 330
V + G++ ++D+ G+ ++EA + + + + W S++ + +HG
Sbjct: 431 VQQYGIEPKHEHYGCMVDLLGRAKLMQEAVNLIESMHLRPNVPVWGSLLAACWMHG 486
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/461 (33%), Positives = 260/461 (56%), Gaps = 40/461 (8%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + +TAMI A + + A ++Y++M + G +PN+ Y +L +C
Sbjct: 382 ARLVFDKMVRKDVISWTAMIGGLA-KSGFGAEALTVYQEMQQAG-VEPNRVTYTSILNAC 439
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ +H Q+V++G V LVN YS G+
Sbjct: 440 SSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGS-------------------- 479
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+K+A +FD M RD+ A+N++I G + L +A+ F R+ E
Sbjct: 480 ------------VKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEE--- 524
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
++P++VT + L+A ++G L+ + IH V + G D+ + NAL+ Y KCGS +A
Sbjct: 525 GLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDA 584
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F++ +K+ + SWN++I A HG+ ++++ +FE M + ++PD VTF+SLL+AC
Sbjct: 585 SIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERM---KMEGVKPDIVTFVSLLSAC 641
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GL+E+GR YF M++ + I P IEHYGC+VDLLGRAG+ +EA ++K M + + +
Sbjct: 642 SHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRI 701
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL C+I+G AE A + +++D +N + L+++Y G WD K+RK+++
Sbjct: 702 WGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQ 761
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
R K PG SWI+V ++H F + D++HP++E+IY L+ +
Sbjct: 762 RGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRL 802
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 178/383 (46%), Gaps = 60/383 (15%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K ++ AR +FD + + +T I YA + +AF +++ M + G PN+ Y
Sbjct: 173 KCGSIEEAREVFDKMEKKSVVSWTITIGGYAD-CGRSETAFEIFQKMEQEGVV-PNRITY 230
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
VL + + K VH++I+ +G E V TALV Y++
Sbjct: 231 ISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAK---------------- 274
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
G K+ +F+ + +RD+ AWN++I G + G + +A + +
Sbjct: 275 ----------------CGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQ 318
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M E + PN++T V L+A ++ L GK IH V + G D + NALI MY +
Sbjct: 319 MQRE---GVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSR 375
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CGS+K+AR FD+ +K + SW +MI A G ++ V++EM Q + P+ VT+
Sbjct: 376 CGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEM---QQAGVEPNRVTY 432
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG---------CLVDLLGRAGRFEE 408
S+LNAC+ +E GR RI Q+ G LV++ G ++
Sbjct: 433 TSILNACSSPAALEWGR----------RIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKD 482
Query: 409 ALEVVKGMKIEPDEVVWGSLLNG 431
A +V M I+ D V + +++ G
Sbjct: 483 ARQVFDRM-IQRDIVAYNAMIGG 504
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 175/359 (48%), Gaps = 50/359 (13%)
Query: 111 QPNQFIYPHVLKSCPDVLESRGTKMVHTQIV--KSGFEQYPVVETALVNSYSRSGNDIGI 168
Q N Y +LK C +V + + VH I+ ++ +QY V AL+N Y + G+ I
Sbjct: 20 QVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTV--NALINMYIQCGS-IEE 76
Query: 169 ARKLFDEMS--DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNG 226
AR+++ ++S +R V SW AM+ GY + G I+ A L M Q+G
Sbjct: 77 ARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQM---------------QQHG 121
Query: 227 LFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSF 286
L P++ T++ LS+ G L+ G+ IH + GL D
Sbjct: 122 L-------------------APDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVK 162
Query: 287 ISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQ 346
++N +++MY KCGS++EAR FD+ KK + SW I +A G+SE + +F++M +
Sbjct: 163 VANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKM---E 219
Query: 347 DHNIRPDGVTFISLLNACTHGGLVEQGRA-YFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
+ P+ +T+IS+LNA + ++ G+A + +++ + + + LV + + G
Sbjct: 220 QEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVG--TALVKMYAKCGS 277
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGYGIML 462
+++ +V + + + D + W +++ G G + A ++ + PN Y I+L
Sbjct: 278 YKDCRQVFEKL-VNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILL 335
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 164/452 (36%), Positives = 250/452 (55%), Gaps = 41/452 (9%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD ++ ++++I+A+A A A +R M+ G +P+ IYP K+C +
Sbjct: 82 VFDETPKKSSTTWSSVISAFAQNEA-PLLALQFFRRMLNDG-VRPDDHIYPSATKACGFL 139
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
S K VH VK+G+ V ++LV+ Y++ G +IG AR LFDEM +RNVVSW+ M
Sbjct: 140 RRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCG-EIGDARHLFDEMPERNVVSWSGM 198
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I GY ++ D A +LF DV
Sbjct: 199 IYGYAQLDDGVEALTLFKQALIEDVDV--------------------------------- 225
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
N T + + L+LGK+IHG + D SF+ +ALI +Y KCG ++ A +
Sbjct: 226 -NDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQV 284
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FD + L WNSM+ + A H ++ +FEEM + ++P+ + F+S+L AC+H
Sbjct: 285 FDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEM---GNVGMKPNFIXFLSVLYACSHA 341
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GLVE+GR YF LM + Y IEP+ EHY LVDLLGRAG+ +EA+ V+K M + P E VWG+
Sbjct: 342 GLVEKGREYFSLM-RDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGA 400
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LL GC+I+ T+ A F +++E+D ++ G ++L+N Y G+++E ++RKML+DR
Sbjct: 401 LLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGV 460
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
K G SW+E +VH F + D++H + EIY
Sbjct: 461 KKETGLSWVEEGNKVHTFTAGDRSHAKWVEIY 492
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 125/306 (40%), Gaps = 47/306 (15%)
Query: 39 LGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAF 98
+G S + YA K + AR +FD + N ++ MI YA Q A
Sbjct: 163 VGSSLVDMYA---------KCGEIGDARHLFDEMPERNVVSWSGMIYGYA-QLDDGVEAL 212
Query: 99 SLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNS 158
+L++ + N F + V++ C K++H +K F+ V +AL++
Sbjct: 213 TLFKQALIE-DVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISL 271
Query: 159 YSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSV 218
YS+ G G A ++FDE+ RN+ W NS+
Sbjct: 272 YSKCGVIEG-AYQVFDEIPTRNLGLW-------------------------------NSM 299
Query: 219 IAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR 278
+ C Q+ F MG + ++PN + + L A H G+++ G+ +
Sbjct: 300 LIACAQHAHTQRVFGLFEEMG---NVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRD 356
Query: 279 NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS-WNSMINSFALHGQSENSIC 337
G++ ++ +L+D+ G+ G L+EA + + S W +++ +H +E +
Sbjct: 357 YGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAF 416
Query: 338 VFEEMM 343
V + ++
Sbjct: 417 VADRIL 422
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 115/256 (44%), Gaps = 31/256 (12%)
Query: 238 MGMEVSDNIRPNQVTL-----------VC-ALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
M + S I+P+Q L +C L + + L+ G +H ++ + GL
Sbjct: 1 MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
+S+ LI++Y K + + FD KK T+W+S+I++FA Q+E + + R
Sbjct: 61 LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFA---QNEAPLLALQFFRRM 117
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT-YRIEPQIEHYGCLVDLLGRAG 404
+ +RPD + S AC + G++ L KT Y + + LVD+ + G
Sbjct: 118 LNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVG--SSLVDMYAKCG 175
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV----KKLIE-IDPNNGGYG 459
+A + M E + V W ++ G Y + D A+ + LIE +D N+ +
Sbjct: 176 EIGDARHLFDEMP-ERNVVSWSGMIYG---YAQLDDGVEALTLFKQALIEDVDVNDFTFS 231
Query: 460 IML----ANIYGELGK 471
++ ++ + ELGK
Sbjct: 232 SVIRVCSSSTFLELGK 247
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/521 (32%), Positives = 285/521 (54%), Gaps = 44/521 (8%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSF-LTTLGQSQTNFYAFKLVRFCTLK--LSNLTYA 65
N T +L+ L +C + LKQ+Q+F + T Q+ KL+ CT +++ YA
Sbjct: 22 NTTYPSSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILT-KLINSCTQNPTTASMDYA 80
Query: 66 RFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
+F+ + P+ L+ +M Y+ A A SL+ + P+ + +P +LK+C
Sbjct: 81 HQLFEAIPQPDIVLFNSMFRGYSRSNA-PLKAISLFIKALNYNL-LPDDYTFPSLLKACV 138
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
+ K +H +K G + P V L+N Y+
Sbjct: 139 VAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAG------------------------ 174
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
D+ A +FD + + V ++N++I G ++ ++A+S FR++ +
Sbjct: 175 --------CNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQ---ARK 223
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
++PN VT++ LS+ G L LGK IH YV +NGLD ++ ALIDMY KCGSL A
Sbjct: 224 LKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAI 283
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
F+ S + +W++MI ++A+HGQ ++ + +FEEM R + ++PD +TF+ LL AC+
Sbjct: 284 SVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAK---VQPDEITFLGLLYACS 340
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
H GLV++G YF M++ Y I P I+HYGC+VDLLGRAG EA + + + I+P ++W
Sbjct: 341 HTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILW 400
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
+LL+ C +G + A+ + +++E+D ++GG ++L+N+ GKW++V +RK++ +
Sbjct: 401 RTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHK 460
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
A K PGCS IEVD VH+F S D H + ++ AL+ +V
Sbjct: 461 GAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELV 501
>gi|345505232|gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabidopsis pumila]
Length = 579
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/495 (34%), Positives = 267/495 (53%), Gaps = 27/495 (5%)
Query: 19 ILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+++ C+ + +K Q+ FL G F L+ LK L +AR IFD +
Sbjct: 93 VMKACSRLGFVKGGLQIHGFLKKTGLWSDLFLQNCLIGL-YLKCGCLGFARQIFDRMPQR 151
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
++ Y +MI Y + SA L+ M R + L S ++
Sbjct: 152 DSVSYNSMIDGYV-KCGSIESASELFDLMPREMKN----------LISWNSLISGYAQTS 200
Query: 136 VHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
I F + P + ++++ Y + G I A+ LFD + R+VV+W MI GY
Sbjct: 201 EGVDIASKLFAEMPEKDLISWNSMIDGYVKHGR-IEDAKDLFDMVPRRDVVTWATMIDGY 259
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
++G + A +LFD MP RDV A+NS++AG QN +A+ F ME ++ P++
Sbjct: 260 AKLGFVHQAKTLFDQMPHRDVVAYNSMMAGYVQNRFHMEALEIFS--DMEKESHLSPDET 317
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
TLV LSAI G L +H Y+ L + ALIDMY KCGS++ A F+
Sbjct: 318 TLVIVLSAIAQLGRLSKAMDMHLYIVEKQFLLGGKLGVALIDMYSKCGSIQHAMLVFEGI 377
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K + WN+MI A+HG E++ F+ +++ + +I+PD +TF+ +LNAC+H GLV+
Sbjct: 378 ENKSIDHWNAMIGGLAIHGLGESA---FDMLLQIERRSIKPDDITFVGVLNACSHSGLVK 434
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G F+LM + ++IEP+++HYGC+VD+L R+G E A +++ M IEP++V+W + L
Sbjct: 435 EGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTA 494
Query: 432 CKIYGRTDFAEFAVKKLI-EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
C + + E K LI + D N Y ++L+N+Y G W +VR+VR M+K+R K
Sbjct: 495 CSHHKEFETGELVAKHLILQADYNPSSY-VLLSNMYASFGMWKDVRRVRTMMKERKIEKI 553
Query: 491 PGCSWIEVDKQVHQF 505
PGCSWIE+D VH+F
Sbjct: 554 PGCSWIELDGXVHEF 568
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 192/399 (48%), Gaps = 34/399 (8%)
Query: 64 YARFIFDHL----TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPH 119
+ARF+F + YL+ AMI ++ S A L+ M+ G P ++F
Sbjct: 35 FARFVFHEYHYGGEVEDPYLWNAMIKSH-SHGTDPRRALLLFCLMLEIGVP-VDKFSLSL 92
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
V+K+C + +G +H + K+G ++ L+ Y + G +G AR++FD M R
Sbjct: 93 VMKACSRLGFVKGGLQIHGFLKKTGLWSDLFLQNCLIGLYLKCGC-LGFARQIFDRMPQR 151
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPD--RDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+ VS+ +MI GY + G I++A+ LFD MP +++ +WNS+I+G Q S+ + +
Sbjct: 152 DSVSYNSMIDGYVKCGSIESASELFDLMPREMKNLISWNSLISGYAQT---SEGVDIASK 208
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
+ E+ + + ++ + G ++ K + V R D +ID Y K
Sbjct: 209 LFAEMPEK---DLISWNSMIDGYVKHGRIEDAKDLFDMVPRR----DVVTWATMIDGYAK 261
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
G + +A+ FD+ + + ++NSM+ + + ++ +F +M + + ++ PD T
Sbjct: 262 LGFVHQAKTLFDQMPHRDVVAYNSMMAGYVQNRFHMEALEIFSDMEK--ESHLSPDETTL 319
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG----CLVDLLGRAGRFEEALEVV 413
+ +L+A + + GR + Y +E Q G L+D+ + G + A+ V
Sbjct: 320 VIVLSA-----IAQLGRLSKAMDMHLYIVEKQFLLGGKLGVALIDMYSKCGSIQHAMLVF 374
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
+G++ + + W +++ G I+G E A L++I+
Sbjct: 375 EGIENKSID-HWNAMIGGLAIHG---LGESAFDMLLQIE 409
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 138/333 (41%), Gaps = 55/333 (16%)
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGND--IGIARKLFDEMSDRNVVS----WTAMISG 190
H +++K+G + + T +V +++ S AR +F E V W AMI
Sbjct: 2 HARLIKTGIIKNSNLTTRIVLAFAASPRPYLAEFARFVFHEYHYGGEVEDPYLWNAMIKS 61
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
++ D + A LF M + VP ++
Sbjct: 62 HSHGTDPRRALLLFCLMLEIGVPV----------------------------------DK 87
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
+L + A G ++ G IHG++ + GL D F+ N LI +Y KCG L AR+ FDR
Sbjct: 88 FSLSLVMKACSRLGFVKGGLQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGFARQIFDR 147
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
++ S+NSMI+ + G E++ +F+ M R + I + + IS + G V
Sbjct: 148 MPQRDSVSYNSMIDGYVKCGSIESASELFDLMPREMKNLISWN--SLISGYAQTSEG--V 203
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
+ F M E + + ++D + GR E+A ++ M D V W ++++
Sbjct: 204 DIASKLFAEMP-----EKDLISWNSMIDGYVKHGRIEDAKDLFD-MVPRRDVVTWATMID 257
Query: 431 GCKIYG-----RTDFAEFAVKKLIEIDPNNGGY 458
G G +T F + + ++ + GY
Sbjct: 258 GYAKLGFVHQAKTLFDQMPHRDVVAYNSMMAGY 290
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/580 (31%), Positives = 293/580 (50%), Gaps = 83/580 (14%)
Query: 16 VLAILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
+ ++L C + L+ QL S+L G S L+ +K ++ A IF+
Sbjct: 247 ISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDL-YVKCGDVETALVIFNSS 305
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
N L+ M+ A+ Q + +F L+ M G +PNQF YP +L++C E
Sbjct: 306 DRTNVVLWNLMLVAFG-QINDLAKSFELFCQMQAAG-IRPNQFTYPCILRTCTCTREIDL 363
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+ +H+ VK+GFE V L++ YS+ G + AR++ + + +++VVSWT+MI+GY
Sbjct: 364 GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGW-LEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 193 RVGDIKNAASLFDSM------PDR---------------------------------DVP 213
+ K+A + F M PD DV
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS 482
Query: 214 AWNS-------------------------------VIAGCTQNGLFSDAISFFRRMGMEV 242
WN+ +++G Q+GL +A+ F RM
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMD--- 539
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
++ N T V ALSA + ++ GK IH V + G ++ + NALI +YGKCGS +
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFE 599
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
+A+ F S++ SWN++I S + HG+ ++ +F++M + I+P+ VTFI +L
Sbjct: 600 DAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQM---KKEGIKPNDVTFIGVLA 656
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H GLVE+G +YFK M+ Y I P+ +HY C++D+ GRAG+ + A + ++ M I D
Sbjct: 657 ACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADA 716
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
+VW +LL+ CK++ + EFA K L+E++P++ ++L+N Y KW +VRKM+
Sbjct: 717 MVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMM 776
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+DR K PG SWIEV VH F D+ HP E+IY+ L
Sbjct: 777 RDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 176/409 (43%), Gaps = 52/409 (12%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +F+ L+ + + AM++ YA Q A LYR M R G P ++ VL SC
Sbjct: 96 ARRVFEELSARDNVSWVAMLSGYA-QNGLGEEALGLYRQMHRAGVV-PTPYVLSSVLSSC 153
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+++H Q K GF V GN
Sbjct: 154 TKAELFAQGRLIHAQGYKHGFCSEIFV-----------GN-------------------- 182
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
A+I+ Y R G + A +F MP RD +N++I+G Q G A+ F M
Sbjct: 183 -AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF---S 238
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ P+ VT+ L+A G LQ G +H Y+++ G+ D + +L+D+Y KCG ++ A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETA 298
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F+ + + + WN M+ +F GQ + FE + Q IRP+ T+ +L C
Sbjct: 299 LVIFNSSDRTNVVLWNLMLVAF---GQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTC 355
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
T ++ G L KT E + G L+D+ + G E+A V++ +K E D V
Sbjct: 356 TCTREIDLGEQIHSLSVKT-GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EKDVVS 413
Query: 425 WGSLLNG------CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYG 467
W S++ G CK A F + I P+N G ++ G
Sbjct: 414 WTSMIAGYVQHECCK----DALAAFKEMQKCGIWPDNIGLASAISGCAG 458
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 175/397 (44%), Gaps = 47/397 (11%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
L+ + A +F + +T + +I+ +A Q H A ++ +M G P+
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHA-QCGHGEHALEIFEEMQFSGL-SPDCVT 246
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+L +C + + + +H+ + K+G ++E +L++ Y
Sbjct: 247 ISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLY----------------- 289
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+ GD++ A +F+S +V WN ++ Q + + F
Sbjct: 290 ---------------VKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFC 334
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+M + IRPNQ T C L T + LG+ IH + G + D ++S LIDMY
Sbjct: 335 QMQ---AAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYS 391
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
K G L++ARR + +K + SW SMI + H ++++ F+EM +C I PD +
Sbjct: 392 KYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKC---GIWPDNIG 448
Query: 357 FISLLNACTHGGLVEQG-RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
S ++ C + QG + + ++ Y + I + LV+L R GR EA +
Sbjct: 449 LASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI--WNALVNLYARCGRIREAFSSFEE 506
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
++ DE+ W L++G + ++ E A+K + +D
Sbjct: 507 IE-HKDEITWNGLVSG---FAQSGLHEEALKVFMRMD 539
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 168/389 (43%), Gaps = 80/389 (20%)
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+H + V G +Y +V L++ YS++G + AR++F+E+S R+ VSW AM+SGY
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLP-ARRVFEELSARDNVSWVAMLSGY---- 118
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
QNGL +A+ +R+M + P L
Sbjct: 119 ---------------------------AQNGLGEEALGLYRQMH---RAGVVPTPYVLSS 148
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
LS+ + G++IH Y++G + F+ NA+I +Y +CGS + A R F +
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
++N++I+ A G E+++ +FEEM Q + PD VT SLL AC G +++G
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEM---QFSGLSPDCVTISSLLAACASLGDLQKGTQ 265
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV----------------------- 412
+ K I G L+DL + G E AL +
Sbjct: 266 LHSYLFKA-GISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIN 324
Query: 413 -----------VKGMKIEPDEVVWGSLLNGCKIYGRTDFAE----FAVKKLIEIDPNNGG 457
++ I P++ + +L C D E +VK E D G
Sbjct: 325 DLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSG 384
Query: 458 YGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+L ++Y + G ++ R+V +MLK+++
Sbjct: 385 ---VLIDMYSKYGWLEKARRVLEMLKEKD 410
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 90/220 (40%), Gaps = 37/220 (16%)
Query: 251 VTLVCALSAI-GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+ CAL A G+ Q+ IH GL + N LID+Y K G + ARR F+
Sbjct: 42 LDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFE 101
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
S + SW +M++ +A +G E ++ ++ +M R + P S+L++CT L
Sbjct: 102 ELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRA---GVVPTPYVLSSVLSSCTKAEL 158
Query: 370 VEQGR----------------------------AYFKLMTKTYRIEPQIE--HYGCLVDL 399
QGR F+L + + P + + L+
Sbjct: 159 FAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISG 218
Query: 400 LGRAGRFEEALEVVKGMK---IEPDEVVWGSLLNGCKIYG 436
+ G E ALE+ + M+ + PD V SLL C G
Sbjct: 219 HAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLG 258
>gi|347954508|gb|AEP33754.1| chloroplast biogenesis 19, partial [Nasturtium officinale]
Length = 447
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/430 (38%), Positives = 250/430 (58%), Gaps = 14/430 (3%)
Query: 101 YRDMVRRGQPQPNQFIYPHVLKSC---PDVLESRGTKMVHTQIVKSGFEQ-YPVVETALV 156
+ DM R +PN + +L C P E+ G ++H K G ++ + +V TA++
Sbjct: 6 FSDM-RFAGVEPNHITFIALLSGCGDFPSGSEALG-DLLHGYACKLGLDRTHVMVGTAIL 63
Query: 157 NSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWN 216
YS+ G AR +FD M D+N V+W MI GY R G + A LFD M +RD+ +W
Sbjct: 64 GMYSKRGR-FRKARLIFDYMEDKNSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDLISWT 122
Query: 217 SVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV 276
+++ G + G +A+S+FR M + ++P+ V ++ AL+A + G L G IH YV
Sbjct: 123 AMVNGFVKKGFHEEALSWFREMQIS---GVKPDYVAIIAALAACTNLGALSFGLWIHRYV 179
Query: 277 YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSI 336
+ +SN+LID+Y +CG ++ AR+ FD+ K+ + SWNS+I FA +G + S+
Sbjct: 180 MSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESL 239
Query: 337 CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCL 396
F +M Q+ +PD VTF L AC+H GLVE+G YF+ M + YRI P+IEHYGC+
Sbjct: 240 FYFRKM---QEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCI 296
Query: 397 VDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG-RTDFAEFAVKKLIEIDPNN 455
VDL RAGR E+AL+VV+ M ++P+EVV GSLL CK +G T AE +K L +++ +
Sbjct: 297 VDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACKNHGNNTLLAERLMKHLSDLNVKS 356
Query: 456 GGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRT 515
++L+N+Y GKW+ K+R+ +K K PG S IE+D+ H F + D H T
Sbjct: 357 HSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDECTHVFMAGDSAHVET 416
Query: 516 EEIYDALESM 525
I + L M
Sbjct: 417 ANIREILGLM 426
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 258/470 (54%), Gaps = 45/470 (9%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K L A+ +FD + N +T MI+AY++ + A M+R G +PN F
Sbjct: 11 VKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLN-DKALEFLVLMLREG-VRPNMFT 68
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
Y VL++C + R +H I+K G
Sbjct: 69 YSSVLRACDGLFNLR---QLHCCIIKIGL------------------------------- 94
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
D +V +A+I Y+R G+++NA +FD M D+ W+S+IAG QN +A+ F+
Sbjct: 95 -DSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFK 153
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
RM Q TL L A +L+LG+ +H +V + D D ++NAL+DMY
Sbjct: 154 RMK---RAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYC 208
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCGSL++A F R +K + SW++MI A +G S+ ++ +FE M + I+P+ VT
Sbjct: 209 KCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESM---KVLGIKPNYVT 265
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+ +L AC+H GLVE+G YF M + + I+P EHYGC++DLLGRAGR EA++++ M
Sbjct: 266 IVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEM 325
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
+ EPD V W +LLN C+++ D A A K+++ +DP + G ++L+NIY +W++V
Sbjct: 326 ECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVA 385
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+VR+ + +R K PGCSWIEV KQ+H F D++HP+ EI L ++
Sbjct: 386 EVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQIREINIQLNQLI 435
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 131/270 (48%), Gaps = 15/270 (5%)
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
+I+ Y + G + +A +FD MPDR+V +W ++I+ + L A+ F M + + +
Sbjct: 6 LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLM---LREGV 62
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
RPN T L A G+ L + +H + + GLD D F+ +ALID+Y + G L+ A R
Sbjct: 63 RPNMFTYSSVLRAC--DGLFNL-RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALR 119
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
FD L W+S+I FA + + ++ +F+ M R T S+L ACT
Sbjct: 120 VFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRA---GFLAQQTTLTSVLRACTG 176
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
L+E GR ++ + + + L+D+ + G E+A V M +E D + W
Sbjct: 177 LALLELGR---QVHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRM-VEKDVISWS 232
Query: 427 SLLNGCKI--YGRTDFAEFAVKKLIEIDPN 454
+++ G Y + F K++ I PN
Sbjct: 233 TMIAGLAQNGYSKEALKLFESMKVLGIKPN 262
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 154/347 (44%), Gaps = 46/347 (13%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
++L C+ + +L+QL + +G F L+ + + L A +FD + T +
Sbjct: 71 SVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYS-RWGELENALRVFDEMVTGDL 129
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+++++I +A Q + A L++ M R G Q VL++C + + VH
Sbjct: 130 VVWSSIIAGFA-QNSDGDEALRLFKRMKRAG-FLAQQTTLTSVLRACTGLALLELGRQVH 187
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
++K ++Q ++ AL++ Y + G+ + A +F M +++V+SW+ MI+G + G
Sbjct: 188 VHVLK--YDQDLILNNALLDMYCKCGS-LEDANAVFVRMVEKDVISWSTMIAGLAQNGYS 244
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
K A LF+SM + +G+ +PN VT+V L
Sbjct: 245 KEALKLFESM----------------------------KVLGI------KPNYVTIVGVL 270
Query: 258 SAIGHTGMLQLG-KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR-NSKKR 315
A H G+++ G H G+D +ID+ G+ G L EA + +
Sbjct: 271 FACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPD 330
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
+W +++N+ +H + +I ++++R D T++ L N
Sbjct: 331 AVTWRALLNACRVHRNVDVAIHAAKQILRLDPQ----DAGTYVLLSN 373
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
F+ N LI+MY K G L +A+ FD+ + + SW +MI++++ ++ ++ M+R
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLR- 59
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
+RP+ T+ S+L AC GL + + ++ ++ + L+D+ R G
Sbjct: 60 --EGVRPNMFTYSSVLRACD--GLFNLRQLHCCII--KIGLDSDVFVRSALIDVYSRWGE 113
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNG 431
E AL V M + D VVW S++ G
Sbjct: 114 LENALRVFDEM-VTGDLVVWSSIIAG 138
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/502 (33%), Positives = 263/502 (52%), Gaps = 48/502 (9%)
Query: 31 QLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFD--HLTTPNTYLYTAMITAY 87
QL + G F L+ +C K S + AR +FD H + Y A+I Y
Sbjct: 77 QLHGHVIKTGCEPEPFVQTSLISMYC--KCSTIASARKVFDENHHSRNLAVCYNALIAGY 134
Query: 88 ASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQ 147
S + S A L+R M + G N ++ C + +H V+ G
Sbjct: 135 -SLNSRFSDAVLLFRQMRKEGV-SVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGL-- 190
Query: 148 YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM 207
D ++ +++ Y R G + A LFD M
Sbjct: 191 ------------------------------DGDLSVGNCLLTMYVRCGSVDFARKLFDGM 220
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
P++ + WN++I+G QNGL + +R+M I P+ VTLV LS+ H G
Sbjct: 221 PEKGLITWNAMISGYAQNGLAGHVLDLYRKMEF---TGIVPDPVTLVGVLSSCAHLGAHA 277
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFA 327
G+ + + +G + F+ NALI+MY +CG+L +AR FD ++K + SW ++I +
Sbjct: 278 AGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYG 337
Query: 328 LHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIE 387
+HGQ E ++ +F+EM+ + PDG F+S+L+AC+H GL E+G YF M + Y ++
Sbjct: 338 MHGQGELAVQLFDEMISSDE---LPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQ 394
Query: 388 PQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKK 447
P EHY C+VDLLGRAGR EEA +++ M +EPD VWG+LL CKI+ + AE A +K
Sbjct: 395 PGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEK 454
Query: 448 LIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHS 507
+IE +P N GY ++L+NI+ E G + + +VR M+++R K PGCS++E ++H F +
Sbjct: 455 VIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSYVEYQGRIHLFLA 514
Query: 508 LDKTHPRTEEIY---DALESMV 526
D+THP+ +EIY D LE ++
Sbjct: 515 GDRTHPQAQEIYHMLDGLEDII 536
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 172/363 (47%), Gaps = 45/363 (12%)
Query: 93 HASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVE 152
H A +LY M+ G PN F +P KSC + +H ++K+G E P V+
Sbjct: 36 HFQEALNLYCQMLASGD-SPNAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQ 94
Query: 153 TALVNSYSRSGNDIGIARKLFDE-MSDRNV-VSWTAMISGYTRVGDIKNAASLFDSMPDR 210
T+L++ Y + + I ARK+FDE RN+ V + A+I+GY
Sbjct: 95 TSLISMYCKC-STIASARKVFDENHHSRNLAVCYNALIAGY------------------- 134
Query: 211 DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK 270
+ N FSDA+ FR+M E + N VT++ + L G
Sbjct: 135 ------------SLNSRFSDAVLLFRQMRKE---GVSVNAVTMLGLIPVCAGPIHLGFGT 179
Query: 271 VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG 330
+H R GLD D + N L+ MY +CGS+ AR+ FD +K L +WN+MI+ +A +G
Sbjct: 180 SLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNG 239
Query: 331 QSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF-KLMTKTYRIEPQ 389
+ + + ++ +M + I PD VT + +L++C H G GR ++ + P
Sbjct: 240 LAGHVLDLYRKM---EFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPF 296
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
+++ L+++ R G +A + GM E + + W +++ G ++G+ + A ++I
Sbjct: 297 LKN--ALINMYARCGNLVKARAIFDGMT-EKNVISWTAIIAGYGMHGQGELAVQLFDEMI 353
Query: 450 EID 452
D
Sbjct: 354 SSD 356
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 105/221 (47%), Gaps = 12/221 (5%)
Query: 214 AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH 273
+WN+ + + F +A++ + +M ++ PN T A + + G +H
Sbjct: 23 SWNARLRELARQRHFQEALNLYCQM---LASGDSPNAFTFPFAFKSCASLSLPLAGSQLH 79
Query: 274 GYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN--SKKRLTSWNSMINSFALHGQ 331
G+V + G + + F+ +LI MY KC ++ AR+ FD N S+ +N++I ++L+ +
Sbjct: 80 GHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSR 139
Query: 332 SENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG-RAYFKLMTKTYRIEPQI 390
+++ +F +M + + + VT + L+ C G + G + + ++ +
Sbjct: 140 FSDAVLLFRQM---RKEGVSVNAVTMLGLIPVCA--GPIHLGFGTSLHACSVRFGLDGDL 194
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
CL+ + R G + A ++ GM E + W ++++G
Sbjct: 195 SVGNCLLTMYVRCGSVDFARKLFDGMP-EKGLITWNAMISG 234
>gi|224126363|ref|XP_002329535.1| predicted protein [Populus trichocarpa]
gi|222870244|gb|EEF07375.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 279/540 (51%), Gaps = 63/540 (11%)
Query: 5 TNQLNQTLNQQVLAILER-CNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLT 63
+N LN +L LE+ C +I Q+ + LT LG Q F A + ++ L++++
Sbjct: 49 SNAPTLDLNHPILQKLEQSCTNIKQFNQIHTQLTVLGLFQHPFAASRYIKKLCACLNSVS 108
Query: 64 YARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
+ +++H+ P+ ++ ++ ++ + + Y M+ + PN + +P V K
Sbjct: 109 HCVSLYNHIEEPDAFMCNTIMRSFVNVNDPFGALRFYYEKMIAKWV-LPNHYTFPLVAKV 167
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSG-------------------- 163
C D+ R + VH +VK GFE V + + YS G
Sbjct: 168 CADIGSLREGQKVHALVVKFGFELDLFVRNSFIRFYSVCGRTSDARMVFDNGFVLDLVSW 227
Query: 164 ----------NDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVP 213
++G+AR++FDEM +R++ +W +MISGY VGD++ A LFD MP RDV
Sbjct: 228 NSMIDGYVKNGELGLAREIFDEMYERDIFTWNSMISGYVGVGDMEAARGLFDKMPSRDVV 287
Query: 214 AWNSVIAGCTQNGLFSDAISFFRRMGM-----------------EVSDNIR--------- 247
+WN +I G + S A FF M + + SD +R
Sbjct: 288 SWNCMIDGFARIKDVSMAAKFFDEMPLRNVVSWNVMLALYLRCKKYSDCLRFFDMMVGGD 347
Query: 248 --PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
P++ +LV L+A ML GK +H Y+ NG+ D +S AL+ MY KCG++ AR
Sbjct: 348 FVPDEASLVSVLTACAELKMLDQGKWVHSYMKDNGIKPDMLLSTALLTMYAKCGAMDLAR 407
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
FD+ +K + SWNSMI + +HG + ++ +F EM + P+ TF+S+L+AC+
Sbjct: 408 EVFDKMPEKSVVSWNSMIIGYGIHGHGDKALEMFREM---EKGGPMPNDATFMSVLSACS 464
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
H G+V G YF LM + YRI+P+ EHYGCLVDLLG+AG E + ++ + E + +W
Sbjct: 465 HSGMVWNGWWYFDLMHRKYRIQPKPEHYGCLVDLLGQAGLKEPSEDLTRKTHTEVEPTLW 524
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
G LL+ C+ + ++ E K+LI++ PN+ ++L+N Y G+WD+V +R LK++
Sbjct: 525 GDLLSACRAHCISEPGEILAKQLIKLFPNHVVPYLLLSNTYVAEGRWDDVENLRMTLKNK 584
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 176/514 (34%), Positives = 265/514 (51%), Gaps = 60/514 (11%)
Query: 65 ARFIFDHLTTP-NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPH---- 119
AR +FD N +TA+++ YA + A +L++ M R N + +
Sbjct: 85 ARALFDRPDARRNVVTWTALLSGYA-RAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAG 143
Query: 120 -------VLKSCPDVLESRGTKMVHTQIVKSG--------FEQYP----VVETALVNSYS 160
+ P V ++ ++ +V+SG F++ P + T +V +
Sbjct: 144 RVRDAWTLFDGMP-VRDAGSWNILLAALVRSGNMDKARKLFDRMPERNVMAWTTMVAGIA 202
Query: 161 RSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIA 220
RSG+ + AR LFD M +RNVVSW AMISGY R I A LF MP RD+ +WN +I
Sbjct: 203 RSGS-VDEARALFDGMPERNVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMIT 261
Query: 221 GCTQNGLFSDAISFFRRM-----------------------------GMEVSDNIRPNQV 251
G Q+ A F +M GM V + IRPNQV
Sbjct: 262 GFIQDRDLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLV-EGIRPNQV 320
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
T + A+ A + L G+ +H + + D+FI + L+++Y KCG ++ AR+ FD +
Sbjct: 321 TFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLS 380
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
+K + SWN MI ++A HG +I ++E+M Q+ +P+ VT++ LL+AC+H GLV+
Sbjct: 381 KEKDVISWNGMIAAYAHHGVGVEAIHLYEKM---QEKGYKPNDVTYVGLLSACSHSGLVD 437
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G F+ M K I + EHY CL+DL RAGR +A ++ +K+EP VW +LL G
Sbjct: 438 EGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGG 497
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C +G + A + L+E +PNN G +L NIY GKW E K+R + DR K P
Sbjct: 498 CNSHGNESIGDLAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQP 557
Query: 492 GCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
GCSWIEV+ +VH F S DK+H ++ I L+ +
Sbjct: 558 GCSWIEVENKVHVFVSRDKSHSESDLINSLLQDI 591
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 196/448 (43%), Gaps = 76/448 (16%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + +TA++ AYA Q + R RR + +
Sbjct: 54 ARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDRPDARRNVVTWTALLSGYARAGR 113
Query: 125 PDVLESRGTKMVHTQIVK------------------SGFEQYPVVETA----LVNSYSRS 162
D E+ +M +V + F+ PV + L+ + RS
Sbjct: 114 VDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGMPVRDAGSWNILLAALVRS 173
Query: 163 GNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC 222
GN + ARKLFD M +RNV++WT M++G R G + A +LFD MP+R+V +WN++I+G
Sbjct: 174 GN-MDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGMPERNVVSWNAMISGY 232
Query: 223 TQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLD 282
+N +A F +M P + D
Sbjct: 233 ARNHRIDEAHDLFMKM---------PTR-------------------------------D 252
Query: 283 LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM 342
+ S+ N +I + + L+ A+ FD+ ++ + +W +M+N + QSE ++ +F M
Sbjct: 253 IASW--NIMITGFIQDRDLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGM 310
Query: 343 MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT-YRIEPQIEHYGCLVDLLG 401
+ IRP+ VTF+ ++AC++ + +G+ +++ KT ++ + IE L++L
Sbjct: 311 LV---EGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIE--STLMNLYA 365
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGYG 459
+ G A +V K E D + W ++ +G A +K+ E PN+ Y
Sbjct: 366 KCGEIRLARKVFDLSK-EKDVISWNGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTY- 423
Query: 460 IMLANIYGELGKWDE-VRKVRKMLKDRN 486
+ L + G DE +R M+KDR+
Sbjct: 424 VGLLSACSHSGLVDEGLRIFEYMVKDRS 451
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 101/248 (40%), Gaps = 54/248 (21%)
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
G + +A LFD PDRDV +W +++A + G+ DA + F R + R N VT
Sbjct: 48 AGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDR------PDARRNVVTW 101
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
LS Y + G + EA F R +
Sbjct: 102 TALLSG-----------------------------------YARAGRVDEAEALFQRMPE 126
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ + SWN+M+ ++ G+ ++ +F+ M +R G I LL A G +++
Sbjct: 127 RNVVSWNTMLEAYTSAGRVRDAWTLFDGM------PVRDAGSWNI-LLAALVRSGNMDKA 179
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
R F M E + + +V + R+G +EA + GM E + V W ++++G
Sbjct: 180 RKLFDRMP-----ERNVMAWTTMVAGIARSGSVDEARALFDGMP-ERNVVSWNAMISGYA 233
Query: 434 IYGRTDFA 441
R D A
Sbjct: 234 RNHRIDEA 241
>gi|224136482|ref|XP_002326871.1| predicted protein [Populus trichocarpa]
gi|222835186|gb|EEE73621.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 182/578 (31%), Positives = 293/578 (50%), Gaps = 74/578 (12%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
+ ++ L +L+RC L Q+ + + K + C +LS+ +AR +FD+
Sbjct: 1 MERECLFLLQRCRTRKTLLQIHALILRNAIDANVNILTKFITTCG-QLSSTRHARHLFDN 59
Query: 72 LT-TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ +T+L +MI ++ A AF+LY+D+ R P+ F + + K C +
Sbjct: 60 RSHRGDTFLCNSMIKSHVVMRQLAD-AFTLYKDLRRETCFVPDNFTFTVLAKCCALRMAV 118
Query: 131 RGTKMVHTQIVKSGF-------------------------------EQYPVVETALVNSY 159
H +VK GF ++ V TAL+ Y
Sbjct: 119 WEGLETHGHVVKIGFCFDMYVSTALVDMYAKFGNLGLARKVFNDMPDRSLVSWTALIGGY 178
Query: 160 SRSGN------------------------------DIGIARKLFDEMSDRNVVSWTAMIS 189
R G+ D+ AR LFDEM +RNV+SWT+MI
Sbjct: 179 VRRGDMGNAWFLFKLMPGRDSAAFNLLIDGYVKVGDMESARSLFDEMPERNVISWTSMIY 238
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GY GD+ +A LFD+MP++++ +WN++I G QN +A+ FR + + S PN
Sbjct: 239 GYCNNGDVLSARFLFDAMPEKNLVSWNAMIGGYCQNKQPHEALKLFREL--QSSTVFEPN 296
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+VT+V L AI G L+LG+ +H +V R LD + +L+DMY KCG + +AR+ F
Sbjct: 297 EVTVVSILPAIATLGALELGEWVHRFVQRKKLDAAVNVCTSLVDMYLKCGEISKARKVFS 356
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
KK +WN++IN FA++G + ++ F EM Q I+P+ +T +L+AC+HGGL
Sbjct: 357 EIPKKETATWNALINGFAMNGLASEALEAFSEM---QQEGIKPNDITMTGVLSACSHGGL 413
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
VE+G+ FK M ++ + P+IEHYGCLVDLLGRAG +EA ++K M E + ++ S
Sbjct: 414 VEEGKGQFKAMIES-GLSPKIEHYGCLVDLLGRAGCLDEAENLIKSMPFEANGIILSSFS 472
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
C A+ + + + ++P N G +M+ N+Y +W +V+++ +++ R A K
Sbjct: 473 FACGFSNDVTRAQRVLNQAVNMEPGNNGIYVMMRNLYAMEERWKDVKEINGLMRRRGAKK 532
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
G S IEVD +V +F S HP+ D +ES++
Sbjct: 533 EVGSSAIEVDSRVSEFISGGIAHPQ----LDVIESVIG 566
>gi|296082950|emb|CBI22251.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/481 (35%), Positives = 264/481 (54%), Gaps = 14/481 (2%)
Query: 21 ERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARFIFDHLTTPNTYL 79
E C + LK + + K+ RF + + L YA +F + PNT+
Sbjct: 3 EACLTMQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFF 62
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP----DVLESRGTKM 135
Y +I Y+ + + S L+ M RR P+ F + +LK D+ +
Sbjct: 63 YNTLIRGYSKSSSPSQSV-QLFNQM-RRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDE 120
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+H ++K GF + V AL++ Y+ G A ++F+EM +VVSW+ ++ + R G
Sbjct: 121 IHGAVLKLGFCFHLFVMNALIHLYAARGVPAA-AHQVFNEMVGADVVSWSGLVVAHVRAG 179
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
+++ A +F MP+RDV +W +++G Q +A+ FR M +RP++V +V
Sbjct: 180 ELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMR---DVGVRPDEVAMVS 236
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
+SA G L+ G +H Y+ NG + NALIDMY KCG + A + F+ +K
Sbjct: 237 VISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKS 296
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
L +WNSMI++ A HG +E++ VF M+ IRPDGVTF++LL A TH G V+ G
Sbjct: 297 LITWNSMISACANHGNAEDAFRVFTLMLY---SGIRPDGVTFLALLTAYTHKGWVDDGYG 353
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
F+ M + Y +E +EHYGC+VD+LGRAGR EEA +++ M + ++VVWG+LL C+IY
Sbjct: 354 LFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIY 413
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
G + E +KKLIE+ P+ GGY I+L +IY G+ E ++R+ + A KT GCSW
Sbjct: 414 GDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSW 473
Query: 496 I 496
+
Sbjct: 474 V 474
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 182/570 (31%), Positives = 283/570 (49%), Gaps = 86/570 (15%)
Query: 30 KQLQSFLTTLGQSQTNFYA-FKLVRF---CTLKLSNLTYARFIFDHLTTPNTYLYTAMIT 85
+QL + + + + N Y KL F C L ++ A IFD + N++L+ MI
Sbjct: 79 QQLHAHMISFSILENNTYLNTKLAAFYAGCGL----MSQAEVIFDGIVLKNSFLWNFMIR 134
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
YAS S LYR+M+ GQ N F YP VLK+C D+L + VH+++V G
Sbjct: 135 GYASNGLPMKS-LVLYREMLCFGQRADN-FTYPFVLKACGDLLLVEIGRRVHSEVVVCGL 192
Query: 146 EQYPVVETALVNSYSRSGN------------------------------DIGIARKLFDE 175
E V +L+ Y++ G+ D G A +FD
Sbjct: 193 ESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDL 252
Query: 176 M-------------------SDRNVVSWTAMISGYTRVGDIKN----------------- 199
M +D V +I GY I N
Sbjct: 253 MGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCN 312
Query: 200 ----AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
A LF+ + +D +WNS+I G +NG +++ FRRM ++ S P+QVT +
Sbjct: 313 CMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSG---PDQVTFIA 369
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
L A L+ G IH Y+ + G D ++ + AL+DMY KCGSL +RR FD K
Sbjct: 370 VLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKS 429
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
L SW++M+ + LHG+ +I + + M + +++ PD F S+L+AC+H GLV +G+
Sbjct: 430 LVSWSAMVAGYGLHGRGREAISILDGM---KANSVIPDNGVFTSILSACSHAGLVVEGKE 486
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
F M K Y ++P + HY C+VDLLGRAG +EA +++ M+I+P +W +LL +++
Sbjct: 487 IFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLH 546
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
AE + +K+ +++P I L+NIY +WD+V +VR M++ + K+PGCS+
Sbjct: 547 KNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSF 606
Query: 496 IEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
IE+D VH+F DK+H +TE+IY L +
Sbjct: 607 IELDNMVHRFLVGDKSHQQTEDIYAKLNEL 636
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 169/388 (43%), Gaps = 56/388 (14%)
Query: 145 FEQYPVVET---ALVNSYS-----RSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGD 196
+QYP+ AL+ S++ + G + F + + ++ T + + Y G
Sbjct: 52 LQQYPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLN-TKLAAFYAGCGL 110
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
+ A +FD + ++ WN +I G NGL ++ +R M + R + T
Sbjct: 111 MSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREM---LCFGQRADNFTYPFV 167
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
L A G ++++G+ +H V GL+ D ++ N+L+ MY K G + AR FDR +++ L
Sbjct: 168 LKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDL 227
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
TSWN+MI+ +A + S + VF+ M + + D T + LL+AC V++G+
Sbjct: 228 TSWNTMISGYAKNADSGTAFLVFDLMGKA---GLFADCTTLLGLLSACADLKAVKEGKVI 284
Query: 377 FKLMTKT-------YRIEPQIEHY---GCLVD-------------------LLG--RAGR 405
+ + IE Y C+VD +LG R G
Sbjct: 285 HGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGD 344
Query: 406 FEEALEVVKGMKIE---PDEVVWGSLLNGCKIYGRTDFA----EFAVKKLIEIDPNNGGY 458
E+L + + M ++ PD+V + ++L C + + VKK + N
Sbjct: 345 AFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDA---NTIV 401
Query: 459 GIMLANIYGELGKWDEVRKVRKMLKDRN 486
G L ++Y + G R+V + D++
Sbjct: 402 GTALVDMYSKCGSLACSRRVFDEMPDKS 429
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/488 (34%), Positives = 256/488 (52%), Gaps = 51/488 (10%)
Query: 39 LGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAF 98
LG + N Y ++ +L A +F L N +TAMI +A Q AF
Sbjct: 624 LGNALINMY---------IRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQ-GEDRKAF 673
Query: 99 SLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNS 158
L+ M G +P + + +LK+C K V I+ SG+E
Sbjct: 674 ELFWQMQNDGF-KPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYEL----------- 721
Query: 159 YSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSV 218
D G+ A+IS Y++ G + +A +FD MP+RD+ +WN +
Sbjct: 722 ------DTGVG---------------NALISAYSKSGSMTDARKVFDKMPNRDIMSWNKM 760
Query: 219 IAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR 278
IAG QNGL A+ F +M + + N+ + V L+A L+ GK +H + +
Sbjct: 761 IAGYAQNGLGGTALQFAYQMQEQ---GVVLNKFSFVSILNACSSFSALEEGKRVHAEIVK 817
Query: 279 NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICV 338
+ D + ALI MY KCGSL+EA+ FD ++K + +WN+MIN++A HG + ++
Sbjct: 818 RKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDF 877
Query: 339 FEEMMRCQD-HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLV 397
F C D I+PDG TF S+L+AC H GLV +G F + + + P IEHYGCLV
Sbjct: 878 FN----CMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLV 933
Query: 398 DLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGG 457
LLGRAGRF+EA ++ M PD VW +LL C+I+G AE A ++++ N
Sbjct: 934 GLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPA 993
Query: 458 YGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEE 517
++L+N+Y G+WD+V K+R++++ R K PG SWIEVD +H+F + D++HP T E
Sbjct: 994 VYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAE 1053
Query: 518 IYDALESM 525
IY+ L+ +
Sbjct: 1054 IYEELKRL 1061
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 179/375 (47%), Gaps = 42/375 (11%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
++ ++ A+ + + +Y A+I A A Q H AF Y M G N+
Sbjct: 330 VRCGDVAGAKQALEAFADRDVVVYNALIAALA-QHGHYEEAFEQYYQMRSDGVVM-NRTT 387
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
Y VL +C +++H+ I + G +D+ I L
Sbjct: 388 YLSVLNACSTSKALGAGELIHSHISEVGHS-----------------SDVQIGNSL---- 426
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
IS Y R GD+ A LF++MP RD+ +WN++IAG + +A+ ++
Sbjct: 427 -----------ISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYK 475
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+M S+ ++P +VT + LSA ++ GK+IH + R+G+ + ++NAL++MY
Sbjct: 476 QMQ---SEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYR 532
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
+CGS+ EA+ F+ + + SWNSMI A HG E + +F EM + + PD +T
Sbjct: 533 RCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEM---KKEGLEPDKIT 589
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
F S+L C + +E GR L+ ++ ++ + L+++ R G ++A EV +
Sbjct: 590 FASVLVGCKNPEALELGRQIHMLIIES-GLQLDVNLGNALINMYIRCGSLQDAYEVFHSL 648
Query: 417 KIEPDEVVWGSLLNG 431
+ + + W +++ G
Sbjct: 649 R-HRNVMSWTAMIGG 662
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 187/419 (44%), Gaps = 48/419 (11%)
Query: 17 LAILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
L++L C+ L + + S ++ +G S L+ + +L AR +F+ +
Sbjct: 389 LSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYA-RCGDLPRARELFNTMP 447
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
+ + A+I YA + A LY+ M G +P + + H+L +C +
Sbjct: 448 KRDLISWNAIIAGYARREDRGE-AMKLYKQMQSEG-VKPGRVTFLHLLSACTNSSAYSDG 505
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
KM+H I++SG + + AL+N Y R G+
Sbjct: 506 KMIHEDILRSGIKSNGHLANALMNMYRRCGS----------------------------- 536
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
I A ++F+ RD+ +WNS+IAG Q+G + A F M E + P+++T
Sbjct: 537 ---IMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKE---GLEPDKITF 590
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
L + L+LG+ IH + +GL LD + NALI+MY +CGSL++A F
Sbjct: 591 ASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRH 650
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ + SW +MI FA G+ + +F +M Q+ +P TF S+L AC +++G
Sbjct: 651 RNVMSWTAMIGGFADQGEDRKAFELFWQM---QNDGFKPVKSTFSSILKACMSSACLDEG 707
Query: 374 RAYFK-LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ ++ Y ++ + + L+ ++G +A +V M D + W ++ G
Sbjct: 708 KKVIAHILNSGYELDTGVGN--ALISAYSKSGSMTDARKVFDKMP-NRDIMSWNKMIAG 763
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 175/386 (45%), Gaps = 46/386 (11%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K +L AR +F + + Y M+ YA Q A+ L+ M G P P++ Y
Sbjct: 230 KCEDLPSARQVFSGIYRRDVVSYNTMLGLYA-QKAYVEECIGLFGQMSSEGIP-PDKVTY 287
Query: 118 PHVLK--SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
++L + P +L+ K +H V G +NS R G
Sbjct: 288 INLLDAFTTPSMLDE--GKRIHKLAVNEG-----------LNSDIRVG------------ 322
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
TA+ + + R GD+ A ++ DRDV +N++IA Q+G + +A +
Sbjct: 323 ---------TALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQY 373
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
+M SD + N+ T + L+A + L G++IH ++ G D I N+LI MY
Sbjct: 374 YQM---RSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMY 430
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
+CG L AR F+ K+ L SWN++I +A ++ ++++M Q ++P V
Sbjct: 431 ARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQM---QSEGVKPGRV 487
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF+ LL+ACT+ G+ + + ++ I+ L+++ R G EA V +G
Sbjct: 488 TFLHLLSACTNSSAYSDGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSIMEAQNVFEG 546
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFA 441
+ D + W S++ G +G + A
Sbjct: 547 TRAR-DIISWNSMIAGHAQHGSYEAA 571
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 176/381 (46%), Gaps = 54/381 (14%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K +++ A +F + + + ++I+ YA Q AF L+ +M G P++
Sbjct: 128 VKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQ-GFKKKAFQLFEEMQTAGFI-PSKIT 185
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
Y +L +C E K +H++I+++G+++ P V+ +L+N Y + D+ AR++F
Sbjct: 186 YISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKC-EDLPSARQVF--- 241
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
SG R RDV ++N+++ Q + I F
Sbjct: 242 ------------SGIYR----------------RDVVSYNTMLGLYAQKAYVEECIGLFG 273
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+M S+ I P++VT + L A ML GK IH GL+ D + AL M+
Sbjct: 274 QMS---SEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFV 330
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV- 355
+CG + A++A + + + + +N++I + A HG E + FE Q + +R DGV
Sbjct: 331 RCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEA---FE-----QYYQMRSDGVV 382
Query: 356 ----TFISLLNACTHGGLVEQGRAYFKLMTKT-YRIEPQIEHYGCLVDLLGRAGRFEEAL 410
T++S+LNAC+ + G +++ + + QI + L+ + R G A
Sbjct: 383 MNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGN--SLISMYARCGDLPRAR 440
Query: 411 EVVKGMKIEPDEVVWGSLLNG 431
E+ M + D + W +++ G
Sbjct: 441 ELFNTMP-KRDLISWNAIIAG 460
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 172/421 (40%), Gaps = 75/421 (17%)
Query: 103 DMVRRGQPQP---NQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSY 159
D+ QP+P N+ Y ++++C K +H Q+V++G
Sbjct: 68 DLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGV-------------- 113
Query: 160 SRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVI 219
G DI ++ L I+ Y + + +A +F MP RDV +WNS+I
Sbjct: 114 ---GPDIFLSNLL---------------INMYVKCRSVSDAHQVFLKMPRRDVISWNSLI 155
Query: 220 AGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN 279
+ Q G A F M + P+++T + L+A L+ GK IH +
Sbjct: 156 SCYAQQGFKKKAFQLFEEMQ---TAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEA 212
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
G D + N+L++MYGKC L AR+ F ++ + S+N+M+ +A E I +F
Sbjct: 213 GYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLF 272
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL-----MTKTYRI-------- 386
+M I PD VT+I+LL+A T ++++G+ KL + R+
Sbjct: 273 GQM---SSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMF 329
Query: 387 -----------------EPQIEHYGCLVDLLGRAGRFEEALEVVKGMK---IEPDEVVWG 426
+ + Y L+ L + G +EEA E M+ + + +
Sbjct: 330 VRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYL 389
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEID-PNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
S+LN C E + E+ ++ G L ++Y G R++ + R
Sbjct: 390 SVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKR 449
Query: 486 N 486
+
Sbjct: 450 D 450
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 164/471 (34%), Positives = 257/471 (54%), Gaps = 23/471 (4%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
++ + ++ A +F+ + N + MI YA Q SA L+ M R N +
Sbjct: 141 IRSNKISDAEKLFNEMPNKNVVSWNTMIDGYA-QNGRIDSAMYLFEKMPERNVVSWNTVM 199
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+L C + E+R F++ P E +++ + + A LF+ M
Sbjct: 200 --SMLAQCGRIEEARRL-----------FDRMP--ERDVISWTAMIAGLLDEALDLFERM 244
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+R++ SW MI+G + GD++ A LF+ MP ++V +W ++I GC Q G +A+ F
Sbjct: 245 PERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFS 304
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
RM ++ +PNQ T V L A + L G+ +H + + +F+ +ALI+MY
Sbjct: 305 RM--LSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYS 362
Query: 297 KCGSLKEARRAFD--RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
KCG L AR+ FD S++ L SWN +I ++A HG + +I F+EM + +PD
Sbjct: 363 KCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRK---SGFKPDD 419
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
VT++ LL+AC+H GLVE+G YF + K I + +HY CLVDL GRAGR +EA ++
Sbjct: 420 VTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIE 479
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
++ +P VWG+LL GC ++ + A KKL+E++P N G ++L+NIY GKW E
Sbjct: 480 RLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWRE 539
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+VR +KD+ K PGCSWIEV +VH F DK+H +++ IY L +
Sbjct: 540 AARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDL 590
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 147/306 (48%), Gaps = 39/306 (12%)
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEM-SDRNVVSWTAMISGYTRVGDIKNAASLFDSMP 208
+ T +++ Y + G I AR+LFD + + +NVV+WTAM+ GY R I +A LF+ MP
Sbjct: 99 ITWTTVISGYIKCGM-IEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMP 157
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
+++V +WN++I G QNG A+ F +M N V+ +S + G ++
Sbjct: 158 NKNVVSWNTMIDGYAQNGRIDSAMYLFEKMP-------ERNVVSWNTVMSMLAQCGRIEE 210
Query: 269 GK----------VIHGYVYRNGL--------------DLDSFISNALIDMYGKCGSLKEA 304
+ VI GL DL S+ N +I + G L+ A
Sbjct: 211 ARRLFDRMPERDVISWTAMIAGLLDEALDLFERMPERDLPSW--NTMITGLIQNGDLRRA 268
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R+ F+ KK + SW +MI G+SE ++ +F M+ + +P+ TF+S+L AC
Sbjct: 269 RKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRML--STNGAKPNQGTFVSVLGAC 326
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV-KGMKIEPDEV 423
++ + +G+ ++++KT + L+++ + G A ++ GM + D V
Sbjct: 327 SNLAGLGEGQQVHQIISKTVYQDSTFV-VSALINMYSKCGELGTARKMFDDGMTSQRDLV 385
Query: 424 VWGSLL 429
W ++
Sbjct: 386 SWNGII 391
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/351 (40%), Positives = 215/351 (61%), Gaps = 6/351 (1%)
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
D V +++I Y + + ++ +F + +RD +WNS+IAGC QNGLF + + FFR+
Sbjct: 332 DAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQ 391
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M M I+P + + A H L LGK +HGY+ RNG D + FI+++L+DMY K
Sbjct: 392 MLMA---KIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAK 448
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG+++ AR+ FDR + + SW +MI ALHG + ++I +FE+M + I P+ V F
Sbjct: 449 CGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQM---KTEGIEPNYVAF 505
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+++L AC+H GLV++ YF MT + I P +EHY + DLLGRAGR EEA + + GM
Sbjct: 506 MAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMP 565
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
I P VW +LL+ C+++ D AE +++E+DP N G I+LANIY +W E K
Sbjct: 566 IGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAK 625
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
R L+ KTP CSWIEV +V+ F + D++HP E+I +A+E ++ L
Sbjct: 626 WRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMEL 676
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 201/448 (44%), Gaps = 71/448 (15%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F+ L P + ++I Y S S S + M+ G P+ ++P VLK+C +
Sbjct: 64 LFNTLHFPPALAWKSVIRCYTSHGLPHKSLGS-FIGMLASGL-YPDHNVFPSVLKACAML 121
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSR------SGNDIGIARKLFDEMSDRNV 181
++ + +H I++ G + AL+N YS+ SG A ++ DEM++R
Sbjct: 122 MDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTR 181
Query: 182 VSWTAMI--------------------------------------SGY---------TRV 194
TA + S Y ++
Sbjct: 182 SVRTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQI 241
Query: 195 GDIKNAAS------LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
DI ++ S +F+ MP++D+ +WN++IAG +NGL+ + ++ R MG N++P
Sbjct: 242 KDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMG---GANLKP 298
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
+ TL L I + GK IHG R GLD + +++++LIDMY KC + ++ R F
Sbjct: 299 DSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVF 358
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
+++ SWNS+I +G + + F +M+ + I+P +F S++ AC H
Sbjct: 359 TLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAK---IKPKSYSFSSIMPACAHLT 415
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
+ G+ +T+ + I LVD+ + G A ++ M++ D V W ++
Sbjct: 416 TLHLGKQLHGYITRN-GFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLR-DMVSWTAM 473
Query: 429 LNGCKIYGRT-DFAE-FAVKKLIEIDPN 454
+ GC ++G D E F K I+PN
Sbjct: 474 IMGCALHGHALDAIELFEQMKTEGIEPN 501
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 9/204 (4%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F LT + + ++I A Q +R M+ + +P + + ++ +C +
Sbjct: 357 VFTLLTERDGISWNSII-AGCVQNGLFDEGLKFFRQMLM-AKIKPKSYSFSSIMPACAHL 414
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
K +H I ++GF++ + ++LV+ Y++ GN I AR++FD M R++VSWTAM
Sbjct: 415 TTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGN-IRTARQIFDRMRLRDMVSWTAM 473
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVP----AWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
I G G +A LF+ M + A+ +V+ C+ GL +A +F M ++
Sbjct: 474 IMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDF- 532
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQ 267
I P +G G L+
Sbjct: 533 -GIAPGVEHYAAVSDLLGRAGRLE 555
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 149 PVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG--------YTRVGDIKNA 200
P ALVNS R N + I + + V+ + A Y+ + + ++
Sbjct: 4 PTSTEALVNSLLR--NPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDS 61
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
LF+++ AW SVI T +GL ++ F +GM ++ + P+ L A
Sbjct: 62 LRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSF--IGM-LASGLYPDHNVFPSVLKAC 118
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
L LG+ +HGY+ R GLD D + NAL++MY K LK++ R
Sbjct: 119 AMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGR 164
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 18 AILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
+I+ C H+ L KQL ++T G + F A LV K N+ AR IFD +
Sbjct: 406 SIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYA-KCGNIRTARQIFDRMRL 464
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
+ +TAMI A HA A L+ M G +PN + VL +C
Sbjct: 465 RDMVSWTAMIMGCALH-GHALDAIELFEQMKTEG-IEPNYVAFMAVLTAC 512
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/506 (33%), Positives = 268/506 (52%), Gaps = 43/506 (8%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYA--FKLVRFCTLKLSNLTYARFIFDHLT 73
VL++ IN QL + + G + A F L+ K ++ AR IFD T
Sbjct: 254 VLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDI-YFKCRDVEMARKIFDQRT 312
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
+ + TAMI+ Y + ++A ++R +++ + + N VL +C +
Sbjct: 313 PVDIVVCTAMISGYVLNGMN-NNALEIFRWLLQE-RMRANSVTLASVLPACAGLAALTLG 370
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
K +H I+K+G V +A+++ Y++ G
Sbjct: 371 KELHGHILKNGHGGSCYVGSAIMDMYAKCGR----------------------------- 401
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
+ A F + D+D WNS+I C+QNG +AI FR+MGM + + V++
Sbjct: 402 ---LDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMA---GTKYDCVSI 455
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
ALSA + L GK IH ++ R D F +ALIDMY KCG+L A R FD +
Sbjct: 456 SAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEE 515
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K SWNS+I ++ HG+ ++S+ +F M+ I+PD VTF+++++AC H G V++G
Sbjct: 516 KNEVSWNSIIAAYGNHGRLKDSLNLFHGML---GDGIQPDHVTFLAIISACGHAGQVDEG 572
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
YF+ MT+ I ++EHY C+VDL GRAGR EA ++ M PD VWG+LL C+
Sbjct: 573 IHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACR 632
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
++G + AE A + L ++DP N GY ++L+N++ G+W+ V K+R ++K+R K PGC
Sbjct: 633 LHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGC 692
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIY 519
SWI+V+ H F + D++HP++ +IY
Sbjct: 693 SWIDVNNTTHMFVAADRSHPQSSQIY 718
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 197/444 (44%), Gaps = 60/444 (13%)
Query: 9 NQTLNQQVLAILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYA 65
+ +L Q+++IL+ C + L +Q + + G KL+ L + L A
Sbjct: 42 DDSLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLD-A 100
Query: 66 RFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
+ IF L + + MI + + A Y M+ G P+++ +P+V+K+C
Sbjct: 101 KNIFYQLRLWCSEPWNWMIRGF-TMMGQFDFALLFYFKMLGCGT-LPDKYTFPYVIKACG 158
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
+ ++VH +I GFE V ++L+ YS +G I AR LFD M ++ V W
Sbjct: 159 GLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGC-IHDARYLFDRMPSKDGVLWN 217
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
M++GY + GD NA +F M RR
Sbjct: 218 VMLNGYVKNGDWDNATGVFMEM----------------------------RR------TE 243
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN--ALIDMYGKCGSLKE 303
PN VT C LS M+ G +HG V +GL++DS ++N ALID+Y KC ++
Sbjct: 244 TNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEM 303
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
AR+ FD+ + + +MI+ + L+G + N++ +F +++ +R + VT S+L A
Sbjct: 304 ARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQ---ERMRANSVTLASVLPA 360
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG------CLVDLLGRAGRFEEALEVVKGMK 417
C + G+ + K H G ++D+ + GR + A + G+
Sbjct: 361 CAGLAALTLGKELHGHILKN-------GHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGIS 413
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFA 441
+ D V W S++ C G+ + A
Sbjct: 414 -DKDAVCWNSMITSCSQNGKPEEA 436
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 16/231 (6%)
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
D++ P V++ L L G+ H + NG+ + + L+ MY CG+ +
Sbjct: 43 DSLAPQLVSI---LQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLD 99
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A+ F + WN MI F + GQ + ++ + +M+ C PD TF ++ A
Sbjct: 100 AKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGC---GTLPDKYTFPYVIKA 156
Query: 364 CTHGGL--VEQGR-AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
C GGL V GR + K+ + ++ + L+ G +A + M
Sbjct: 157 C--GGLNSVALGRVVHDKIQFMGFELDVFVG--SSLIKFYSENGCIHDARYLFDRMP-SK 211
Query: 421 DEVVWGSLLNGCKIYGRTDFAE--FAVKKLIEIDPNNGGYGIMLANIYGEL 469
D V+W +LNG G D A F + E +PN+ + +L+ E+
Sbjct: 212 DGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEI 262
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/580 (31%), Positives = 293/580 (50%), Gaps = 83/580 (14%)
Query: 16 VLAILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
+ ++L C + L+ QL S+L G S L+ +K ++ A IF+
Sbjct: 247 ISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDL-YVKCGDVETALVIFNSS 305
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
N L+ M+ A+ Q + +F L+ M G +PNQF YP +L++C E
Sbjct: 306 DRTNVVLWNLMLVAFG-QINDLAKSFELFCQMQAAG-IRPNQFTYPCILRTCTCTREIDL 363
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+ +H+ VK+GFE V L++ YS+ G + AR++ + + +++VVSWT+MI+GY
Sbjct: 364 GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGW-LEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 193 RVGDIKNAASLFDSM------PDR---------------------------------DVP 213
+ K+A + F M PD DV
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS 482
Query: 214 AWNS-------------------------------VIAGCTQNGLFSDAISFFRRMGMEV 242
WN+ +++G Q+GL +A+ F RM
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMD--- 539
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
++ N T V ALSA + ++ GK IH V + G ++ + NALI +YGKCGS +
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFE 599
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
+A+ F S++ SWN++I S + HG+ ++ +F++M + I+P+ VTFI +L
Sbjct: 600 DAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQM---KKEGIKPNDVTFIGVLA 656
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H GLVE+G +YFK M+ Y I P+ +HY C++D+ GRAG+ + A + ++ M I D
Sbjct: 657 ACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADA 716
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
+VW +LL+ CK++ + EFA K L+E++P++ ++L+N Y KW +VRKM+
Sbjct: 717 MVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMM 776
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+DR K PG SWIEV VH F D+ HP E+IY+ L
Sbjct: 777 RDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 176/409 (43%), Gaps = 52/409 (12%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +F+ L+ + + AM++ YA Q A LYR M R G P ++ VL SC
Sbjct: 96 ARRVFEELSARDNVSWVAMLSGYA-QNGLGEEALGLYRQMHRAGVV-PTPYVLSSVLSSC 153
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+++H Q K GF V GN
Sbjct: 154 TKAELFAQGRLIHAQGYKHGFCSEIFV-----------GN-------------------- 182
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
A+I+ Y R G + A +F MP RD +N++I+G Q G A+ F M
Sbjct: 183 -AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF---S 238
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ P+ VT+ L+A G LQ G +H Y+++ G+ D + +L+D+Y KCG ++ A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETA 298
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F+ + + + WN M+ +F GQ + FE + Q IRP+ T+ +L C
Sbjct: 299 LVIFNSSDRTNVVLWNLMLVAF---GQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTC 355
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
T ++ G L KT E + G L+D+ + G E+A V++ +K E D V
Sbjct: 356 TCTREIDLGEQIHSLSVKT-GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EKDVVS 413
Query: 425 WGSLLNG------CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYG 467
W S++ G CK A F + I P+N G ++ G
Sbjct: 414 WTSMIAGYVQHECCK----DALAAFKEMQKCGIWPDNIGLASAISGCAG 458
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 175/397 (44%), Gaps = 47/397 (11%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
L+ + A +F + +T + +I+ +A Q H A ++ +M G P+
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHA-QCGHGEHALEIFEEMQFSGL-SPDCVT 246
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+L +C + + + +H+ + K+G ++E +L++ Y
Sbjct: 247 ISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLY----------------- 289
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+ GD++ A +F+S +V WN ++ Q + + F
Sbjct: 290 ---------------VKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFC 334
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+M + IRPNQ T C L T + LG+ IH + G + D ++S LIDMY
Sbjct: 335 QMQ---AAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYS 391
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
K G L++ARR + +K + SW SMI + H ++++ F+EM +C I PD +
Sbjct: 392 KYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKC---GIWPDNIG 448
Query: 357 FISLLNACTHGGLVEQG-RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
S ++ C + QG + + ++ Y + I + LV+L R GR EA +
Sbjct: 449 LASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI--WNALVNLYARCGRIREAFSSFEE 506
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
++ DE+ W L++G + ++ E A+K + +D
Sbjct: 507 IE-HKDEITWNGLVSG---FAQSGLHEEALKVFMRMD 539
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 168/389 (43%), Gaps = 80/389 (20%)
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+H + V G +Y +V L++ YS++G + AR++F+E+S R+ VSW AM+SGY
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLP-ARRVFEELSARDNVSWVAMLSGY---- 118
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
QNGL +A+ +R+M + P L
Sbjct: 119 ---------------------------AQNGLGEEALGLYRQMH---RAGVVPTPYVLSS 148
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
LS+ + G++IH Y++G + F+ NA+I +Y +CGS + A R F +
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
++N++I+ A G E+++ +FEEM Q + PD VT SLL AC G +++G
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEM---QFSGLSPDCVTISSLLAACASLGDLQKGTQ 265
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV----------------------- 412
+ K I G L+DL + G E AL +
Sbjct: 266 LHSYLFKA-GISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIN 324
Query: 413 -----------VKGMKIEPDEVVWGSLLNGCKIYGRTDFAE----FAVKKLIEIDPNNGG 457
++ I P++ + +L C D E +VK E D G
Sbjct: 325 DLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSG 384
Query: 458 YGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+L ++Y + G ++ R+V +MLK+++
Sbjct: 385 ---VLIDMYSKYGWLEKARRVLEMLKEKD 410
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 90/220 (40%), Gaps = 37/220 (16%)
Query: 251 VTLVCALSAI-GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+ CAL A G+ Q+ IH GL + N LID+Y K G + ARR F+
Sbjct: 42 LDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFE 101
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
S + SW +M++ +A +G E ++ ++ +M R + P S+L++CT L
Sbjct: 102 ELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRA---GVVPTPYVLSSVLSSCTKAEL 158
Query: 370 VEQGR----------------------------AYFKLMTKTYRIEPQIE--HYGCLVDL 399
QGR F+L + + P + + L+
Sbjct: 159 FAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISG 218
Query: 400 LGRAGRFEEALEVVKGMK---IEPDEVVWGSLLNGCKIYG 436
+ G E ALE+ + M+ + PD V SLL C G
Sbjct: 219 HAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLG 258
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/580 (31%), Positives = 293/580 (50%), Gaps = 83/580 (14%)
Query: 16 VLAILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
+ ++L C + L+ QL S+L G S L+ +K ++ A IF+
Sbjct: 247 ISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDL-YVKCGDVETALVIFNSS 305
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
N L+ M+ A+ Q + +F L+ M G +PNQF YP +L++C E
Sbjct: 306 DRTNVVLWNLMLVAFG-QINDLAKSFELFCQMQAAG-IRPNQFTYPCILRTCTCTREIDL 363
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+ +H+ VK+GFE V L++ YS+ G + AR++ + + +++VVSWT+MI+GY
Sbjct: 364 GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGW-LEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 193 RVGDIKNAASLFDSM------PDR---------------------------------DVP 213
+ K+A + F M PD DV
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS 482
Query: 214 AWNS-------------------------------VIAGCTQNGLFSDAISFFRRMGMEV 242
WN+ +++G Q+GL +A+ F RM
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMD--- 539
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
++ N T V ALSA + ++ GK IH V + G ++ + NALI +YGKCGS +
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFE 599
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
+A+ F S++ SWN++I S + HG+ ++ +F++M + I+P+ VTFI +L
Sbjct: 600 DAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQM---KKEGIKPNDVTFIGVLA 656
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H GLVE+G +YFK M+ Y I P+ +HY C++D+ GRAG+ + A + ++ M I D
Sbjct: 657 ACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADA 716
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
+VW +LL+ CK++ + EFA K L+E++P++ ++L+N Y KW +VRKM+
Sbjct: 717 MVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMM 776
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+DR K PG SWIEV VH F D+ HP E+IY+ L
Sbjct: 777 RDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 176/409 (43%), Gaps = 52/409 (12%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +F+ L+ + + AM++ YA Q A LYR M R G P ++ VL SC
Sbjct: 96 ARRVFEELSARDNVSWVAMLSGYA-QNGLGEEALGLYRQMHRAGVV-PTPYVLSSVLSSC 153
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+++H Q K GF V GN
Sbjct: 154 TKAELFAQGRLIHAQGYKHGFCSEIFV-----------GN-------------------- 182
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
A+I+ Y R G + A +F MP RD +N++I+G Q G A+ F M
Sbjct: 183 -AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF---S 238
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ P+ VT+ L+A G LQ G +H Y+++ G+ D + +L+D+Y KCG ++ A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETA 298
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F+ + + + WN M+ +F GQ + FE + Q IRP+ T+ +L C
Sbjct: 299 LVIFNSSDRTNVVLWNLMLVAF---GQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTC 355
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
T ++ G L KT E + G L+D+ + G E+A V++ +K E D V
Sbjct: 356 TCTREIDLGEQIHSLSVKT-GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EKDVVS 413
Query: 425 WGSLLNG------CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYG 467
W S++ G CK A F + I P+N G ++ G
Sbjct: 414 WTSMIAGYVQHECCK----DALAAFKEMQKCGIWPDNIGLASAISGCAG 458
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 175/397 (44%), Gaps = 47/397 (11%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
L+ + A +F + +T + +I+ +A Q H A ++ +M G P+
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHA-QCGHGEHALEIFEEMQFSGL-SPDCVT 246
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+L +C + + + +H+ + K+G ++E +L++ Y
Sbjct: 247 ISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLY----------------- 289
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+ GD++ A +F+S +V WN ++ Q + + F
Sbjct: 290 ---------------VKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFC 334
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+M + IRPNQ T C L T + LG+ IH + G + D ++S LIDMY
Sbjct: 335 QMQ---AAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYS 391
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
K G L++ARR + +K + SW SMI + H ++++ F+EM +C I PD +
Sbjct: 392 KYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKC---GIWPDNIG 448
Query: 357 FISLLNACTHGGLVEQG-RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
S ++ C + QG + + ++ Y + I + LV+L R GR EA +
Sbjct: 449 LASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI--WNALVNLYARCGRIREAFSSFEE 506
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
M+++ D + L++G + ++ E A+K + +D
Sbjct: 507 MELK-DGITGNGLVSG---FAQSGLHEEALKVFMRMD 539
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 166/389 (42%), Gaps = 80/389 (20%)
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+H + V G +Y +V L++ YS++G + AR++F+E+S
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLP-ARRVFEELSA----------------- 105
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
RD +W ++++G QNGL +A+ +R+M + P L
Sbjct: 106 --------------RDNVSWVAMLSGYAQNGLGEEALGLYRQMHRA---GVVPTPYVLSS 148
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
LS+ + G++IH Y++G + F+ NA+I +Y +CGS + A R F +
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
++N++I+ A G E+++ +FEEM Q + PD VT SLL AC G +++G
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEM---QFSGLSPDCVTISSLLAACASLGDLQKGTQ 265
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV----------------------- 412
+ K I G L+DL + G E AL +
Sbjct: 266 LHSYLFKA-GISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIN 324
Query: 413 -----------VKGMKIEPDEVVWGSLLNGCKIYGRTDFAE----FAVKKLIEIDPNNGG 457
++ I P++ + +L C D E +VK E D G
Sbjct: 325 DLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSG 384
Query: 458 YGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+L ++Y + G ++ R+V +MLK+++
Sbjct: 385 ---VLIDMYSKYGWLEKARRVLEMLKEKD 410
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 89/218 (40%), Gaps = 37/218 (16%)
Query: 253 LVCALSAI-GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
CAL A G+ Q+ IH GL + N LID+Y K G + ARR F+
Sbjct: 44 FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
S + SW +M++ +A +G E ++ ++ +M R + P S+L++CT L
Sbjct: 104 SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRA---GVVPTPYVLSSVLSSCTKAELFA 160
Query: 372 QGR----------------------------AYFKLMTKTYRIEPQIE--HYGCLVDLLG 401
QGR F+L + + P + + L+
Sbjct: 161 QGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHA 220
Query: 402 RAGRFEEALEVVKGMK---IEPDEVVWGSLLNGCKIYG 436
+ G E ALE+ + M+ + PD V SLL C G
Sbjct: 221 QCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLG 258
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/466 (35%), Positives = 263/466 (56%), Gaps = 42/466 (9%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ +FD + + + AMI+ YA + + A L++DM++ +P++ V+ +C
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYA-ETGNYKEALELFKDMMKTNV-RPDESTMVTVVSAC 276
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ VH I GF G+++ I
Sbjct: 277 AQSGSIELGRQVHLWIDDHGF-----------------GSNLKIV--------------- 304
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
A+I Y++ G+++ A LF+ +P +DV +WN++I G T L+ +A+ F+ M +
Sbjct: 305 NALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM---LRS 361
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR--NGLDLDSFISNALIDMYGKCGSLK 302
PN VT++ L A H G + +G+ IH Y+ + G+ S + +LIDMY KCG ++
Sbjct: 362 GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIE 421
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
A + F+ K L+SWN+MI FA+HG+++ S +F M + I+PD +TF+ LL+
Sbjct: 422 AAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI---GIQPDDITFVGLLS 478
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H G+++ GR F+ MT+ Y++ P++EHYGC++DLLG +G F+EA E++ M++EPD
Sbjct: 479 ACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDG 538
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
V+W SLL CK++G + E + LI+I+P N G ++L+NIY G+W+EV K R +L
Sbjct: 539 VIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALL 598
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
D+ K PGCS IE+D VH+F DK HPR EIY LE M L
Sbjct: 599 NDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL 644
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/450 (30%), Positives = 238/450 (52%), Gaps = 19/450 (4%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFD 70
N L++L C + L+ + + + +G TN+ KL+ FC L L YA +F
Sbjct: 33 NHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFK 92
Query: 71 HLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
+ PN ++ M +A S P SA LY M+ G PN + +P VLKSC
Sbjct: 93 TIQEPNLLIWNTMFRGHALSSDPV---SALKLYVCMISLGL-LPNSYTFPFVLKSCAKSK 148
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ + +H ++K G + V T+L++ Y ++G + A K+FD+ R+VVS+TA+I
Sbjct: 149 AFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGR-LEDAHKVFDKSPHRDVVSYTALI 207
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
GY G I+NA LFD +P +DV +WN++I+G + G + +A+ F+ M + N+RP
Sbjct: 208 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM---MKTNVRP 264
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
++ T+V +SA +G ++LG+ +H ++ +G + I NALID+Y KCG L+ A F
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
+R K + SWN++I + + ++ +F+EM+R + P+ VT +S+L AC H G
Sbjct: 325 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE---TPNDVTMLSILPACAHLG 381
Query: 369 LVEQGRAYFKLMTKTYR-IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
++ GR + K + + L+D+ + G E A +V + + W +
Sbjct: 382 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNA 440
Query: 428 LLNGCKIYGRTD--FAEFAVKKLIEIDPNN 455
++ G ++GR D F F+ + I I P++
Sbjct: 441 MIFGFAMHGRADASFDLFSRMRKIGIQPDD 470
>gi|222624265|gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
Length = 523
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 166/469 (35%), Positives = 265/469 (56%), Gaps = 54/469 (11%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP---QPNQFIYP 118
+ +A +FD + P+ ++Y +I A+ A A SLY M+RRG +P++ +P
Sbjct: 28 IAHAYLVFDQIPRPDRFMYNTLIRG-AAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFP 86
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
VL++C + VH +VK+G E V+ AL+ ++ GN +GIA LFD +
Sbjct: 87 FVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGN-LGIAAALFDGRAR 145
Query: 179 RNVVSWTAMISG-------------------------------YTRVGDIKNAASLFDSM 207
+ V+W+AMI+G Y + GD+ A LFD +
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQV 205
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFF---RRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
P+RDV +WN +I+G + G A+ F +RMG +P+ VT++ LSA +G
Sbjct: 206 PERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGE------KPDIVTMLSLLSACADSG 259
Query: 265 MLQLGKVIHGYV----YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
L +G+ +H + RNG + + NALIDMY KCGS+K A F K +++WN
Sbjct: 260 DLDVGQRLHSSLSDMFSRNGFPV--VLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWN 317
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
S++ ALHG SI +FE+M++ + +RPD +TF+++L AC+HGG+V++GR +F LM
Sbjct: 318 SIVGGLALHGHVLESIDMFEKMLKGK---VRPDEITFVAVLIACSHGGMVDKGREFFNLM 374
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
YR+EP I+HYGC+VD+LGRAG +EA E + MK EP+ V+W +LL+ C+++G +
Sbjct: 375 QHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIEL 434
Query: 441 AEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
A+ A ++L++ + G ++L+NIY +G+W K+RK++ D K
Sbjct: 435 AKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNK 483
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 124/303 (40%), Gaps = 62/303 (20%)
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM-GMEVSDNIRPNQVTL 253
G I +A +FD +P D +N++I G DA+S + RM +RP+++T
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL------------ 301
L A G G +H +V + G + D+F+ NALI M+ CG+L
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 145
Query: 302 -------------------KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM 342
AR FD K L SWN MI ++A G + +F+++
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQV 205
Query: 343 ---------------MRCQDH-------------NIRPDGVTFISLLNACTHGGLVEQGR 374
+RC H +PD VT +SLL+AC G ++ G+
Sbjct: 206 PERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQ 265
Query: 375 AYFKLMTKTY-RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
++ + R + L+D+ + G + A EV M+ + D W S++ G
Sbjct: 266 RLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMR-DKDVSTWNSIVGGLA 324
Query: 434 IYG 436
++G
Sbjct: 325 LHG 327
>gi|224056897|ref|XP_002299078.1| predicted protein [Populus trichocarpa]
gi|222846336|gb|EEE83883.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 160/499 (32%), Positives = 271/499 (54%), Gaps = 30/499 (6%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYL 79
L C+ +KQL + G + + + + +S + YA IF+ + +P+ ++
Sbjct: 20 LRTCHDFQEVKQLHAQFVVSGLLGYHPLCARRLLEAYVTMSQIYYAFSIFERIPSPDVFV 79
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
Y MI RG N F Y VLK+C + K VH Q
Sbjct: 80 YNTMI----------------------RGLTMDN-FTYTFVLKACSHLKAPFEGKQVHCQ 116
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
I+K+G + ++L++ Y+ SG+ I A ++ E S+ N ++ AMISGY G +
Sbjct: 117 IIKAGIVPDTHIHSSLIHMYTNSGS-IDDAERVLGEFSEENTLAKNAMISGYLTEGRVDK 175
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
A +FD M +D +W+++I G T+NG+ ++A++ F+ M + +I PN+ LV LSA
Sbjct: 176 ARKMFDDMAAKDAASWSALITGYTKNGMHTEALALFQDM---MVSHILPNEAALVSLLSA 232
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSW 319
G G L G+ IH Y+ + + + + ++ ALIDMY K GS++ F + +++ + +W
Sbjct: 233 CGQLGTLHQGRWIHAYIDKTRVLMSTKLTTALIDMYAKSGSIECGYGLFQKMARRDVVTW 292
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
MI++FA+HG + +F+EM+ IRP+ V F+++L+AC+H G VE+GR YF
Sbjct: 293 GVMISAFAIHGHASKCFQLFDEMLA---DGIRPNKVIFVAILSACSHAGCVEEGRQYFSQ 349
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
M + I+P IEHYGC+VDLLGRAG +A +++ M +P+ ++WGSLL C+ +
Sbjct: 350 MEHGFGIKPSIEHYGCMVDLLGRAGLLADAEQLILSMPKQPNSIIWGSLLGACRTHNDLK 409
Query: 440 FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVD 499
+A + L+E++P +G + ++ G+ +E K+RKM+ ++ T G S+IEV+
Sbjct: 410 RGTWAFENLMELEPTSGDRHKLAGLMFANAGEKEEAAKIRKMIHEKEMVTTCGSSFIEVE 469
Query: 500 KQVHQFHSLDKTHPRTEEI 518
VH+F H + +I
Sbjct: 470 GAVHEFTVGYTVHNKARDI 488
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/516 (31%), Positives = 276/516 (53%), Gaps = 45/516 (8%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFK-LVRFCTLKLSNLTYARFIFDHL 72
+ ++++++ C H + L Q+ + + T Q + + L R + +L Y+R +FD L
Sbjct: 28 EPLISLIKSCTHKSQLLQIHAHIITTSSIQDPIVSLRFLTRTASAPFRDLGYSRRLFDLL 87
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRG---QPQPNQFIYPHVLKSCPDVLE 129
T P Y AM+ AY+ + + +YRDM R+G P + F +KSC +L
Sbjct: 88 TNPFVSHYNAMLRAYSLSRSPLEGLY-MYRDMERQGVRADPLSSSF----AVKSCIKLLS 142
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
+H +I +G + + + T+M+
Sbjct: 143 LLFGIQIHARIFINGHQA--------------------------------DSLLLTSMMD 170
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
Y+ G + A LFD +P +DV AWN +I+ T+N DA+ F M + +P+
Sbjct: 171 LYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIM-QSPTYLCQPD 229
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+VT + L A L+ G+ IHGY+ ++G + +S + N+LI MY +CG + +A FD
Sbjct: 230 KVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFD 289
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
+ ++K + SW++MI+ +++G +I F EM Q + + P TF ++L+AC+H GL
Sbjct: 290 KMTEKNVVSWSAMISGLSMNGHGREAIEAFWEM---QKNGVEPGDHTFTAVLSACSHCGL 346
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
V++G A+F M + + I P + HYGC+VDLLGRAG ++A E++ M++ PD +W +LL
Sbjct: 347 VDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLL 406
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
C+I+G + E V+ LIE+ G ++L NIY G WD+V ++RK++K++ Y
Sbjct: 407 GACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYT 466
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
TP C+ IE++ VHQF D +HP ++IY L+ +
Sbjct: 467 TPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEI 502
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/499 (32%), Positives = 274/499 (54%), Gaps = 45/499 (9%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
++ +L A +F+ +T T + +M+ Y+++ A L+ + P+P+ F
Sbjct: 16 IRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI-----PEPDIFS 70
Query: 117 YPHVLKSCP-------------DVLESRGTKMVHTQIVKSGFEQ-------------YPV 150
Y +++ +C D + + T +T I SGF Q PV
Sbjct: 71 Y-NIMLACYLHNADVESARLFFDQMPVKDTASWNTMI--SGFSQNGMMDQARELFLVMPV 127
Query: 151 VET----ALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDS 206
+ A+++ Y SG D+ +A++LF+ R+VV+WTAMI+G+ + G I+ A F+
Sbjct: 128 RNSVSWNAMISGYVESG-DLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEE 186
Query: 207 MPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGML 266
MP +++ WN++IAG +N + + F+RM V RPN +L L + L
Sbjct: 187 MPMKNLVTWNAMIAGYIENCQAENGLKLFKRM---VESGFRPNPSSLSSVLLGCSNLSAL 243
Query: 267 QLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSF 326
+LGK +H + ++ + + +L+ MY KCG L++A + F +K + +WN+MI+ +
Sbjct: 244 KLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGY 303
Query: 327 ALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRI 386
A HG E ++ +F++M +D ++PD +TF+++L+AC H G V+ G YF M + Y +
Sbjct: 304 AQHGAGEKALYLFDKM---RDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGV 360
Query: 387 EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
E + +HY C+VDLLGR G+ EA++++K M +P ++G+LL C+I+ + AEFA K
Sbjct: 361 EAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAK 420
Query: 447 KLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFH 506
L+ +DP + + LAN+Y + +WD V VR+ +KD KTPG SWIEV VH+F
Sbjct: 421 NLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFR 480
Query: 507 SLDKTHPRTEEIYDALESM 525
S D+ HP I++ L +
Sbjct: 481 SGDRIHPELAFIHEKLNEL 499
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 137/324 (42%), Gaps = 63/324 (19%)
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCT-QNGLFSDAISFFRRM 238
NV+S +I+ + R GD+ +A +F+SM + WNS++AG + + G A F R+
Sbjct: 4 NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI 63
Query: 239 GMEVSDNIRPNQVTLVCAL---------------------------SAIGHTGMLQLGK- 270
+I + L C L S GM+ +
Sbjct: 64 P---EPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARE 120
Query: 271 ---------------VIHGYVYRNGLDLD----------SFIS-NALIDMYGKCGSLKEA 304
+I GYV LDL S ++ A+I + K G ++ A
Sbjct: 121 LFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELA 180
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ F+ K L +WN+MI + + Q+EN + +F+ M+ + RP+ + S+L C
Sbjct: 181 EKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMV---ESGFRPNPSSLSSVLLGC 237
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
++ ++ G+ +L+ K+ + I L+ + + G E+A ++ M + D V
Sbjct: 238 SNLSALKLGKQVHQLICKS-PVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMP-QKDVVT 295
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKL 448
W ++++G +G + A + K+
Sbjct: 296 WNAMISGYAQHGAGEKALYLFDKM 319
>gi|9958072|gb|AAG09561.1|AC011810_20 Hypothetical protein [Arabidopsis thaliana]
Length = 421
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 152/381 (39%), Positives = 228/381 (59%), Gaps = 7/381 (1%)
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
E+ V+ +++ Y GN + AR LFD+M R+V+SW ++ GY +GD++ +FD
Sbjct: 34 ERDIVLWNTMISGYIEMGNMLE-ARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFD 92
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
MP+R+V +WN +I G QNG S+ + F+RM E S + PN T+ LSA G
Sbjct: 93 DMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGS--VVPNDATMTLVLSACAKLGA 150
Query: 266 LQLGKVIHGYVYRNGLD-LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
GK +H Y G + +D + NALIDMYGKCG+++ A F ++ L SWN+MIN
Sbjct: 151 FDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMIN 210
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
A HG ++ +F EM ++ I PD VTF+ +L AC H GLVE G AYF M +
Sbjct: 211 GLAAHGHGTEALNLFHEM---KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDF 267
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
I P+IEH GC+VDLL RAG +A+E + M ++ D V+W +LL K+Y + D E A
Sbjct: 268 SIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVA 327
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
+++LI+++P N +ML+NIYG+ G++D+ +++ ++D K G SWIE D + +
Sbjct: 328 LEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVK 387
Query: 505 FHSLDKTHPRTEEIYDALESM 525
F+S + HPRTEE+ L +
Sbjct: 388 FYSSGEKHPRTEELQRILREL 408
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 9/204 (4%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + N + + +I YA Q S ++ MV G PN VL +C +
Sbjct: 90 VFDDMPERNVFSWNGLIKGYA-QNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKL 148
Query: 128 LESRGTKMVHTQIVKSGFEQYPV-VETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
K VH G+ + V V+ AL++ Y + G I IA ++F + R+++SW
Sbjct: 149 GAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGA-IEIAMEVFKGIKRRDLISWNT 207
Query: 187 MISGYTRVGDIKNAASLFDSMPDR----DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
MI+G G A +LF M + D + V+ C GL D +++F M +
Sbjct: 208 MINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDF 267
Query: 243 SDNIRPNQVTLVCALSAIGHTGML 266
S I P C + + G L
Sbjct: 268 S--IMPEIEHCGCVVDLLSRAGFL 289
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 77/208 (37%), Gaps = 63/208 (30%)
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD-- 347
++I+ Y L ARR FD + ++ + WN+MI+ + G + +F++ M C+D
Sbjct: 11 SMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQ-MPCRDVM 69
Query: 348 -HNIRPDGVTFISLLNACTH-----------------GGLVEQGR-----AYFKLMTKTY 384
N +G I + AC G + GR FK M
Sbjct: 70 SWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEG 129
Query: 385 RIEPQ----------------------IEHYG--------------CLVDLLGRAGRFEE 408
+ P + YG L+D+ G+ G E
Sbjct: 130 SVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEI 189
Query: 409 ALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
A+EV KG+K D + W +++NG +G
Sbjct: 190 AMEVFKGIK-RRDLISWNTMINGLAAHG 216
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/457 (34%), Positives = 255/457 (55%), Gaps = 42/457 (9%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A +FD + + + A I+ YA + + A L++ M++ +P++ VL +C
Sbjct: 188 AHKMFDEIPVKDVVSWNAXISGYA-ETGNYKEALELFKKMMKT-NVRPDESTMVTVLSAC 245
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ VH+ I GF G ++ I
Sbjct: 246 AQSGSIELGRQVHSWINDHGF-----------------GXNLKIV--------------- 273
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
A+I Y++ G+++ A LF + ++DV +WN++I G T L+ +A+ F+ M +
Sbjct: 274 NALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDM---LRS 330
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR--NGLDLDSFISNALIDMYGKCGSLK 302
+PN VT++ LSA H G + +G+ IH Y+ + G+ S + +LIDMY KCG ++
Sbjct: 331 GEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIE 390
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
A++ FD + L+SWN+MI FA+HG++ + +F M + + I PD +TF+ LL+
Sbjct: 391 AAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRK---NGIEPDDITFVGLLS 447
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H G+++ GR F+ MT+ Y++ P++EHYGC++DL G +G F+EA +++ M++EPD
Sbjct: 448 ACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDG 507
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
V+W SLL CK++G + E + LI+I+P N G ++L+NIY +W+EV K R +L
Sbjct: 508 VIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALL 567
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
D+ K PGCS IE+D VH+F DK HPR EIY
Sbjct: 568 NDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/508 (28%), Positives = 251/508 (49%), Gaps = 54/508 (10%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFD 70
N L++L C + L+ + + + G TN+ KL+ C L L YA +FD
Sbjct: 2 NHPSLSLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFD 61
Query: 71 HLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
+ P ++ M +A S P SA LY MV G PN + +P +LKSC
Sbjct: 62 TIQEPXLLIWNTMFRGHALSSDPV---SALKLYVCMVSLGL-LPNSYTFPFLLKSCAKSX 117
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ + +H Q++K GF+ + T+L++ Y ++G + A+K+ D+ S R+VVS+TA+I
Sbjct: 118 AFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGR-LEDAQKVXDKSSHRDVVSYTALI 176
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
+GY G I++A +FD +P +DV +WN+ I+G + G + +A+ F++M + N+RP
Sbjct: 177 TGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKM---MKTNVRP 233
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
++ T+V LSA +G ++LG+ +H ++ +G + I NALID+Y KCG L+ A F
Sbjct: 234 DESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLF 293
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
S K + SWN++I + + ++ +F++M+R + +P+ VT +S+L+AC H G
Sbjct: 294 QGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGE---KPNDVTMLSILSACAHLG 350
Query: 369 LVEQGRAYFKLMTKTYR-IEPQIEHYGCLVDLLGRAGRFEEALEVVKGM----------- 416
++ GR + K + + L+D+ + G E A +V M
Sbjct: 351 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAM 410
Query: 417 -----------------------KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI---E 450
IEPD++ + LL+ C G D + + +
Sbjct: 411 IFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYK 470
Query: 451 IDPNNGGYGIMLANIYGELGKWDEVRKV 478
+ P YG M+ ++ G G + E K+
Sbjct: 471 LMPKLEHYGCMI-DLXGHSGLFKEAEKM 497
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 175/508 (34%), Positives = 262/508 (51%), Gaps = 53/508 (10%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A +FD L + + +MI+ Y S +Y+ M+ G I VL C
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSN-GLTERGLGIYKQMMYLGIDVDLATIIS-VLVGC 261
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ K VH+ +KS FE+ L++ YS+ G D+ A ++F++M +RNVVSW
Sbjct: 262 ANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG-DLDGALRVFEKMGERNVVSW 320
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDR----DVPAWNSVIAGCTQNGLFSDA--------- 231
T+MI+GYTR G A L M DV A S++ C ++G +
Sbjct: 321 TSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 380
Query: 232 -------------ISFFRRMG-----------MEVSD---------NIRPNQVTLVCALS 258
+ + + G M V D ++P+ T+ C L
Sbjct: 381 NNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILP 440
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
A L+ GK IHGY+ RNG D ++NAL+D+Y KCG L AR FD K L S
Sbjct: 441 ACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVS 500
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
W MI + +HG +I F EM +D I PD V+FIS+L AC+H GL+EQG +F
Sbjct: 501 WTVMIAGYGMHGYGNEAIATFNEM---RDAGIEPDEVSFISILYACSHSGLLEQGWRFFY 557
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
+M + IEP++EHY C+VDLL R G +A + ++ + I PD +WG+LL GC+IY
Sbjct: 558 IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDI 617
Query: 439 DFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV 498
+ AE +++ E++P N GY ++LANIY E K +EV+++R+ + + K PGCSWIE+
Sbjct: 618 ELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEI 677
Query: 499 DKQVHQFHSL-DKTHPRTEEIYDALESM 525
+V+ F S + +HP +++I L+ M
Sbjct: 678 KGRVNLFVSGNNSSHPHSKKIESLLKKM 705
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 163/345 (47%), Gaps = 35/345 (10%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
Y VL+ C + K VH+ I + + LV+ Y+ G D+ R++FD M
Sbjct: 102 YGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCG-DLKEGRRVFDTM 160
Query: 177 SDRNVVSWTAMISGYTRVGDIK--------------------NAASLFDSMPDRDVPAWN 216
+NV W M+S Y ++GD K +A+ LFD + DRDV +WN
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWN 220
Query: 217 SVIAGCTQNGLFSDAISFFRRM---GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH 273
S+I+G NGL + +++M G++V + T++ L ++G L LGK +H
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDV------DLATIISVLVGCANSGTLSLGKAVH 274
Query: 274 GYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSE 333
++ + SN L+DMY KCG L A R F++ ++ + SW SMI + G S+
Sbjct: 275 SLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSD 334
Query: 334 NSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
+I + ++M + ++ D V S+L+AC G ++ G+ + K + +
Sbjct: 335 GAIILLQQM---EKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI-KANNMASNLFVC 390
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
L+D+ + G E A V M ++ D + W +++ K RT
Sbjct: 391 NALMDMYAKCGSMEGANSVFSTMVVK-DIISWNTMVGELKPDSRT 434
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 120/325 (36%), Gaps = 93/325 (28%)
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASL--FDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
D V + A I + ++GD++NA L + + + SV+ C GL S
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELVCMCQKSELETKTYGSVLQLCA--GLKS------ 114
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
L GK +H + N + +D + L+ Y
Sbjct: 115 ------------------------------LTDGKKVHSIIKSNSVGVDEALGLKLVSFY 144
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP--- 352
CG LKE RR FD KK + WN M++ +A G + SIC+F+ M+ RP
Sbjct: 145 ATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESA 204
Query: 353 ---------------------------------------------DGVTFISLLNACTHG 367
D T IS+L C +
Sbjct: 205 SELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANS 264
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
G + G+A L K+ E +I L+D+ + G + AL V + M E + V W S
Sbjct: 265 GTLSLGKAVHSLAIKS-SFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTS 322
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEID 452
++ G Y R +++ A+ L +++
Sbjct: 323 MIAG---YTRDGWSDGAIILLQQME 344
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 184/569 (32%), Positives = 293/569 (51%), Gaps = 64/569 (11%)
Query: 8 LNQTL------NQQVLAILERCNHINHLKQ---LQSFLTTLGQSQTNFYAFKLVRFCTLK 58
LN+TL +Q +++ +C HLK L S T F A +L+ F + K
Sbjct: 3 LNETLSSLDPAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYS-K 61
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQF--- 115
++ A +F L NT+ + +I+AY S+ + A +L M P+PN
Sbjct: 62 CDSIQSAHKVFHVLPVKNTHSWNIIISAY-SRSGLFNEAHNLLDQM-----PKPNLVSYN 115
Query: 116 -----------------IYPHVLKSCPDVLESRGT-----------------KMVHTQIV 141
++ +LK C +VL T + VH +
Sbjct: 116 SLISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAI 175
Query: 142 KSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAA 201
G ++ AL+++Y + G + I+ +F M +R+VVSWT+M++ Y + +++A
Sbjct: 176 IIGLNSNIIIGNALIDAYGKCG-EPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAH 234
Query: 202 SLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIG 261
LF M +++ +W ++IAG QNG +A+ F +M E I P+ T LSA
Sbjct: 235 WLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREE---GIPPSAFTFASVLSACA 291
Query: 262 HTGMLQLGKVIHGYVYRNG-LD--LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
++ GK IHG++ R+ +D + FI NALIDMY KCG ++ A F +K + S
Sbjct: 292 DLALIARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVS 351
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
WNS+I FA +G E S+ VFE M+ + +IRP+ VTF+ LL+AC H GLV +G
Sbjct: 352 WNSLITGFAQNGHGEESLAVFERMI---EADIRPNHVTFLGLLSACCHTGLVSEGLRILD 408
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV-VWGSLLNGCKIYGR 437
M K Y + P+ +HY ++DLLGR R EEA+ ++K D V +WG+LL C+I+G
Sbjct: 409 SMEKDYGVCPRSDHYAIMIDLLGRNNRLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGN 468
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
D A A + L +++P N +M+ NIY +WDE R+VR+++ +R K CSWIE
Sbjct: 469 MDLARRAAEVLFQLEPGNAARYVMVYNIYAAASRWDEARQVRRLMMERGLRKEAACSWIE 528
Query: 498 VDKQVHQFHSLDKTHPRTEEIYDALESMV 526
V HQF + +++H + E+Y+ + ++V
Sbjct: 529 VRNTRHQFVAKERSHCQINEVYEVIHNLV 557
>gi|218192167|gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indica Group]
Length = 523
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 166/469 (35%), Positives = 265/469 (56%), Gaps = 54/469 (11%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP---QPNQFIYP 118
+ +A +FD + P+ ++Y +I A+ A A SLY M+RRG +P++ +P
Sbjct: 28 IAHAYLVFDQIPRPDRFMYNTLIRG-AAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFP 86
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
VL++C + VH +VK+G E V+ AL+ ++ GN +GIA LFD +
Sbjct: 87 FVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGN-LGIAAALFDGRAR 145
Query: 179 RNVVSWTAMISG-------------------------------YTRVGDIKNAASLFDSM 207
+ V+W+AMI+G Y + GD+ A LFD +
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQV 205
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFF---RRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
P+RDV +WN +I+G + G A+ F +RMG +P+ VT++ LSA +G
Sbjct: 206 PERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGE------KPDIVTMLSLLSACADSG 259
Query: 265 MLQLGKVIHGYV----YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
L +G+ +H + RNG + + NALIDMY KCGS+K A F K +++WN
Sbjct: 260 DLDVGQRLHSSLSDMFSRNGFPV--VLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWN 317
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
S++ ALHG SI +FE+M++ + +RPD +TF+++L AC+HGG+V++GR +F LM
Sbjct: 318 SIVGGLALHGHVLESIDMFEKMLKGK---VRPDEITFVAVLIACSHGGMVDKGREFFNLM 374
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
YR+EP I+HYGC+VD+LGRAG +EA E + MK EP+ V+W +LL+ C+++G +
Sbjct: 375 QHKYRVEPNIKHYGCIVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIEL 434
Query: 441 AEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
A+ A ++L++ + G ++L+NIY +G+W K+RK++ D K
Sbjct: 435 AKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNK 483
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 124/303 (40%), Gaps = 62/303 (20%)
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM-GMEVSDNIRPNQVTL 253
G I +A +FD +P D +N++I G DA+S + RM +RP+++T
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL------------ 301
L A G G +H +V + G + D+F+ NALI M+ CG+L
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 145
Query: 302 -------------------KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM 342
AR FD K L SWN MI ++A G + +F+++
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQV 205
Query: 343 ---------------MRCQDH-------------NIRPDGVTFISLLNACTHGGLVEQGR 374
+RC H +PD VT +SLL+AC G ++ G+
Sbjct: 206 PERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQ 265
Query: 375 AYFKLMTKTY-RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
++ + R + L+D+ + G + A EV M+ + D W S++ G
Sbjct: 266 RLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMR-DKDVSTWNSIVGGLA 324
Query: 434 IYG 436
++G
Sbjct: 325 LHG 327
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 239/395 (60%), Gaps = 37/395 (9%)
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGN-DIGIARKLFDEMSDRNVVSWTAMISGY 191
T +H I K GFE+ V +++SY++ G+ D+ +ARK+
Sbjct: 217 TASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKV------------------- 257
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
FD+M +RDV +WNS+IA QNG+ ++AI + +M + V I+ N V
Sbjct: 258 ------------FDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKM-LNVGGGIKCNAV 303
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
L L A H G +Q GK IH V R GL+ + ++ +++DMY KCG ++ A RAF +
Sbjct: 304 ALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKI 363
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
+K + SW++MI + +HG+ + ++ +F EM R +RP+ +TFIS+L AC+H GL++
Sbjct: 364 KEKNILSWSAMITGYGMHGRGQEALEIFTEMKRS---GLRPNYITFISVLAACSHAGLLD 420
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+GR ++ M + + IE +EHYGC+VDLLGRAG +EA ++K MK++PD +WG+LL+
Sbjct: 421 EGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA 480
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C+I+ + AE +VK+L E+D +N GY ++L+NIY E W +V ++R ++K R K P
Sbjct: 481 CRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPP 540
Query: 492 GCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
G S E+ +++ F+ DK+HP+ EIY LE ++
Sbjct: 541 GYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLL 575
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 142/330 (43%), Gaps = 45/330 (13%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP-QPNQFIYPH 119
+L AR +FD + + + +MI YA Q ++ A LY M+ G + N
Sbjct: 250 DLEVARKVFDTMER-DVVSWNSMIALYA-QNGMSAEAIGLYSKMLNVGGGIKCNAVALSA 307
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
VL +C + K +H Q+V+ G E+ V T++V+ YS+ G + +A + F ++ ++
Sbjct: 308 VLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGR-VEMASRAFRKIKEK 366
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
N++SW+AMI+GY G + A +F M +R G
Sbjct: 367 NILSWSAMITGYGMHGRGQEALEIFTEM----------------------------KRSG 398
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN-GLDLDSFISNALIDMYGKC 298
+ RPN +T + L+A H G+L G+ + + + G++ ++D+ G+
Sbjct: 399 L------RPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRA 452
Query: 299 GSLKEARRAF-DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
G L EA + K W +++++ +H E EM + + +
Sbjct: 453 GCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVE-----LAEMSVKRLFELDASNSGY 507
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIE 387
LL+ + + +L+ KT RIE
Sbjct: 508 YVLLSNIYAEARMWKDVERIRLLVKTRRIE 537
>gi|345505228|gb|AEN99838.1| chlororespiratory reduction 4, partial [Matthiola incana]
Length = 584
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 171/490 (34%), Positives = 264/490 (53%), Gaps = 14/490 (2%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
VL R ++ Q+ FL G F L+ LK L +AR +FD +
Sbjct: 99 VLKACSRLGFVDFGMQVHGFLRKTGIYSDLFLQNCLIGL-YLKCGCLGFARQVFDRMPQR 157
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
++ Y +MI Y + SA L+ M R + I + + S +S
Sbjct: 158 DSVSYNSMIDGYV-KCGLIESARELFDLMPR----EKKNLISWNCMIS--GYTQSEDGVN 210
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
V +++ E+ + +L++ Y + I A+ LFD M ++VV+W MI GY ++G
Sbjct: 211 VASKLFDEMPEKDLISWNSLIDGYVKH-RRIEDAKSLFDLMPRKDVVTWATMIDGYAKLG 269
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
+ A LFD MP RDV A+NS++AG QN ++AI F ME ++ P++ TLV
Sbjct: 270 FVHQAKKLFDEMPQRDVVAYNSMMAGYVQNKYHAEAIGIFN--DMEKESHLSPDETTLVI 327
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
LSAI G L IH Y+ N L + ALID Y KCGS++++ R F+ K
Sbjct: 328 VLSAIAQLGRLSKAVDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKS 387
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
+ WN+MI A+HG E++ F+ +++ + +I+PD +TFI +LNAC+H GLV++G
Sbjct: 388 IDHWNAMIGGLAIHGLGESA---FDMLLQIEKRSIKPDDITFIGVLNACSHSGLVKEGLL 444
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
F+LM + ++IEP+++HYGC+VD+L R+G E A +++ M IEP++V+W + L C +
Sbjct: 445 CFELMRRKHKIEPKLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSNH 504
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
+ E K L N ++L+N+Y G W EVR+VR +K+R K PGCSW
Sbjct: 505 KEFETGELVAKHLFLQGGYNPSSFVLLSNMYASFGMWKEVRRVRTTMKERKLRKIPGCSW 564
Query: 496 IEVDKQVHQF 505
IE+D VH+F
Sbjct: 565 IELDGNVHEF 574
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 23/259 (8%)
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
+ D WN+VI + +A+ F M + +++ ++ ++ L A G +
Sbjct: 55 EEDPFLWNAVIKSFSHGVDPRNALLLFCLM---IENSVSVDKFSISLVLKACSRLGFVDF 111
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
G +HG++ + G+ D F+ N LI +Y KCG L AR+ FDR ++ S+NSMI+ +
Sbjct: 112 GMQVHGFLRKTGIYSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVK 171
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
G E++ +F+ M R + + I + C G Q + +K + P
Sbjct: 172 CGLIESARELFDLMPREKKNLISWN----------CMISGYT-QSEDGVNVASKLFDEMP 220
Query: 389 QIE--HYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
+ + + L+D + R E+A + M D V W ++++G Y + F A K
Sbjct: 221 EKDLISWNSLIDGYVKHRRIEDAKSLFDLMP-RKDVVTWATMIDG---YAKLGFVHQA-K 275
Query: 447 KLIEIDPNNG--GYGIMLA 463
KL + P Y M+A
Sbjct: 276 KLFDEMPQRDVVAYNSMMA 294
>gi|345505216|gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
Length = 617
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 168/494 (34%), Positives = 266/494 (53%), Gaps = 25/494 (5%)
Query: 19 ILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L+ C+ + +K Q+ L G F L+ LK L +AR IFD +
Sbjct: 131 VLKACSRLGFVKGGLQIHGILRKTGLCSDLFLQNCLIGL-YLKCGCLGFARQIFDRMPQR 189
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
++ + +MI Y + SA L+ M R + L S ++
Sbjct: 190 DSVSFNSMIDGYVKR-GLIESARELFDLMPREVKN----------LISWNSIISGYAQTS 238
Query: 136 VHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
I + F + P + ++++ Y + G I A+ LFD M R+VV+W MI GY
Sbjct: 239 DGVDIASNLFAEMPEKDLISWNSMIDGYVKHGR-IEDAKDLFDAMPRRDVVTWATMIDGY 297
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
++G + A +LFD MP RDV ++NS++AG QN +A+ F ME ++ P++
Sbjct: 298 AKLGFVHQAKTLFDQMPHRDVVSYNSMMAGYVQNKYHMEALEIFS--DMEKESHLSPDET 355
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
TLV LSAI G L +H Y+ L + ALIDMY KCGS++ A F+
Sbjct: 356 TLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFEGI 415
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K + WN+MI A+HG E++ F+ +++ + +I+PD +TF+ +LNAC+H GLV+
Sbjct: 416 ENKSIDHWNAMIGGLAIHGLGESA---FDMLLQIERRSIKPDDITFVGVLNACSHSGLVK 472
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G F+LM + ++IEP+++HYGC+VD+L R+G E A +++ M IEP++V+W + L
Sbjct: 473 EGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIQEMPIEPNDVIWRTFLTA 532
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C + + E K LI N ++L+N+Y GKW +VR++R M+K+R K P
Sbjct: 533 CNHHKEFETGELVGKHLILQAGYNPSSYVLLSNMYASFGKWKDVRRIRTMMKERKIEKIP 592
Query: 492 GCSWIEVDKQVHQF 505
GCSWIE+D +VH+F
Sbjct: 593 GCSWIELDGRVHEF 606
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 214/464 (46%), Gaps = 63/464 (13%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLV-RFCTLKLSNLT-YARFIFDHL-- 72
+ +L RC + ++ + L T G + + + ++V F L +AR +F
Sbjct: 19 IQLLGRCKTSEDVSKIHARLITTGLIKNSNLSTRIVLAFAASPRPYLAEFARLVFREYHV 78
Query: 73 --TTP-----NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
++P + +L+ A+I ++ S A L+ M+ G ++F VLK+C
Sbjct: 79 CSSSPGGEVEDPFLWNAVIKSH-SHGKDPKQALLLFCLMLENG-VSVDKFSMSLVLKACS 136
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
+ +G +H + K+G ++ L+ Y + G +G AR++FD M R+ VS+
Sbjct: 137 RLGFVKGGLQIHGILRKTGLCSDLFLQNCLIGLYLKCGC-LGFARQIFDRMPQRDSVSFN 195
Query: 186 AMISGYTRVGDIKNAASLFDSMPD--RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
+MI GY + G I++A LFD MP +++ +WNS+I+G Q SD G++++
Sbjct: 196 SMIDGYVKRGLIESARELFDLMPREVKNLISWNSIISGYAQT---SD--------GVDIA 244
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV----YRNGLDL-------DSFISNALI 292
N+ + + ++ +I GYV + DL D +I
Sbjct: 245 SNL----------FAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDAMPRRDVVTWATMI 294
Query: 293 DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
D Y K G + +A+ FD+ + + S+NSM+ + + ++ +F +M + + ++ P
Sbjct: 295 DGYAKLGFVHQAKTLFDQMPHRDVVSYNSMMAGYVQNKYHMEALEIFSDMEK--ESHLSP 352
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG----CLVDLLGRAGRFEE 408
D T + +L+A + + GR + Y +E Q G L+D+ + G +
Sbjct: 353 DETTLVIVLSA-----IAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQH 407
Query: 409 ALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
A+ V +G++ + + W +++ G I+G E A L++I+
Sbjct: 408 AMLVFEGIENKSID-HWNAMIGGLAIHG---LGESAFDMLLQIE 447
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 18/249 (7%)
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
WN+VI + A+ F M + + + ++ ++ L A G ++ G IHG
Sbjct: 93 WNAVIKSHSHGKDPKQALLLFCLM---LENGVSVDKFSMSLVLKACSRLGFVKGGLQIHG 149
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
+ + GL D F+ N LI +Y KCG L AR+ FDR ++ S+NSMI+ + G E+
Sbjct: 150 ILRKTGLCSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKRGLIES 209
Query: 335 SICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG 394
+ +F+ M R + I + + IS + G V+ F M E + +
Sbjct: 210 ARELFDLMPREVKNLISWNSI--ISGYAQTSDG--VDIASNLFAEMP-----EKDLISWN 260
Query: 395 CLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG-----RTDFAEFAVKKLI 449
++D + GR E+A ++ M D V W ++++G G +T F + + ++
Sbjct: 261 SMIDGYVKHGRIEDAKDLFDAMP-RRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVV 319
Query: 450 EIDPNNGGY 458
+ GY
Sbjct: 320 SYNSMMAGY 328
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 159/471 (33%), Positives = 269/471 (57%), Gaps = 45/471 (9%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM-VRRGQPQPNQFI---- 116
L AR +FD + N +T+MI Y +A A SL++D+ V F+
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGY-DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMG 185
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGND-IGIARKLFDE 175
V+ +C V T+ +H+ ++K GF++ V L+++Y++ G + +ARK+
Sbjct: 186 LVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKI--- 242
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
FD + D+D ++NS+++ Q+G+ ++A F
Sbjct: 243 ----------------------------FDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 236 RRMGMEVSDNIRP-NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
RR+ V + + N +TL L A+ H+G L++GK IH V R GL+ D + ++IDM
Sbjct: 275 RRL---VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KCG ++ AR+AFDR K + SW +MI + +HG + ++ +F M+ D +RP+
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI---DSGVRPNY 388
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
+TF+S+L AC+H GL +G +F M + +EP +EHYGC+VDLLGRAG ++A ++++
Sbjct: 389 ITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
MK++PD ++W SLL C+I+ + AE +V +L E+D +N GY ++L++IY + G+W +
Sbjct: 449 RMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKD 508
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
V +VR ++K+R K PG S +E++ +VH F D+ HP+ E+IY+ L +
Sbjct: 509 VERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAEL 559
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 161/354 (45%), Gaps = 41/354 (11%)
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
A + A A AFS R + P + +P +K+C + + K H Q G+
Sbjct: 52 ARSGDSAEALLAFSSMRKL----SLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGY 107
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLF- 204
+ V +AL+ YS G + ARK+FDE+ RN+VSWT+MI GY G+ +A SLF
Sbjct: 108 QSDIFVSSALIVMYSTCGK-LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFK 166
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
D + D + D F MG+ V+++ A S + G
Sbjct: 167 DLLVDEND----------------DDDAMFLDSMGL----------VSVISACSRVPAKG 200
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS--LKEARRAFDRNSKKRLTSWNSM 322
L + IH +V + G D + N L+D Y K G + AR+ FD+ K S+NS+
Sbjct: 201 ---LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257
Query: 323 INSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK 382
++ +A G S + VF +++ + + + +T ++L A +H G + G+ + +
Sbjct: 258 MSVYAQSGMSNEAFEVFRRLVK--NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR 315
Query: 383 TYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
+E + ++D+ + GR E A + MK + W +++ G ++G
Sbjct: 316 M-GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHG 367
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 96/172 (55%), Gaps = 7/172 (4%)
Query: 198 KNAASLFDSMPDR-DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
+N +LF+ D+ DV +WNSVIA ++G ++A+ F M ++ P + + CA
Sbjct: 26 QNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMR---KLSLYPTRSSFPCA 82
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
+ A + GK H + G D F+S+ALI MY CG L++AR+ FD K+ +
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQ---DHNIRPDGVTFISLLNACT 365
SW SMI + L+G + +++ +F++++ + D + D + +S+++AC+
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 159/469 (33%), Positives = 253/469 (53%), Gaps = 40/469 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L+ A +FD + + + A+I A+ Q + +L+ M+R + +P+QF Y
Sbjct: 425 KCEALSEACCMFDEMERRDAVSWNAVIAAH-EQNGNEEETLNLFASMLRL-RMEPDQFTY 482
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
VLK+C +H +I+KSG V AL++ Y + G
Sbjct: 483 GSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGM------------- 529
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
I+ A + D + + + +WN++IAG T DA SFF
Sbjct: 530 -------------------IEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYE 570
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M + +++P+ T L A + + LGK IHG + + L D +I++ L+DMY K
Sbjct: 571 M---LKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSK 627
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG+++++ F++ K +WN+MI +A HG E ++ FE M Q N+RP+ TF
Sbjct: 628 CGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERM---QLENVRPNHATF 684
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+S+L AC H G +++G YF M Y +EPQIEHY C++D++GR+GR EAL++++ M
Sbjct: 685 VSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMP 744
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
E D V+W +LL+ CKI+G + AE A +++++P + I+L+NIY + G W +V +
Sbjct: 745 FEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSE 804
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+RKM++ K PGCSWIEV +VH F +KTHPR EEIY L ++
Sbjct: 805 MRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLL 853
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 143/283 (50%), Gaps = 14/283 (4%)
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
N+ +++ Y + + A +FD M RD +WN+VIA QNG + ++ F M
Sbjct: 412 NICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASM- 470
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
+ + P+Q T L A L G IH + ++GL LDSF+ ALIDMY KCG
Sbjct: 471 --LRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCG 528
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
++EA++ DR ++ + SWN++I F L SE++ F EM++ +++PD T+
Sbjct: 529 MIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLK---MSVKPDNFTYAI 585
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY--GCLVDLLGRAGRFEEALEVVKGMK 417
+L+AC + V G+ ++ + ++E + Y LVD+ + G +++ V +
Sbjct: 586 VLDACANLASVGLGK---QIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAP 642
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFA--EFAVKKLIEIDPNNGGY 458
D V W +++ G +G + A F +L + PN+ +
Sbjct: 643 -NKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATF 684
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 183/400 (45%), Gaps = 50/400 (12%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
IF + N ++A+I H L+++M + G +Q IY V +SC +
Sbjct: 233 IFSEIPVKNWVCWSAIIAGCVQNDEHIL-GLELFKEMQKVG-IGVSQSIYASVFRSCAGL 290
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
+ +H +K F G+DI + TA
Sbjct: 291 SALKVGTQLHAHALKCDF-----------------GSDITVG---------------TAT 318
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
+ Y + G + +A +F+S+P + +N++I GC +N +A+ FF+ + + +
Sbjct: 319 LDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLL---LKSGLG 375
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
N+++L A SA G+ +H ++ L + ++N+++DMYGKC +L EA
Sbjct: 376 FNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCM 435
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FD ++ SWN++I + +G E ++ +F M+R + + PD T+ S+L AC+
Sbjct: 436 FDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLR---MEPDQFTYGSVLKACSSQ 492
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHY--GCLVDLLGRAGRFEEALEVVKGMKIEPDEVV- 424
+ G ++ + + ++ + G L+D+ + G EEA ++ +IE +V
Sbjct: 493 QALNSG---MEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHD--RIEQQTMVS 547
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGYGIML 462
W +++ G + ++ A ++++ + P+N Y I+L
Sbjct: 548 WNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVL 587
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 3/228 (1%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ H+++ C D + K H +++ SGF + L+ Y R + + A K+F++M
Sbjct: 46 FSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSH-LNYAYKVFEKM 104
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
S R+V+S+ MISGY G++ A F P RDV +WNS+++G QNG +I F
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
MG S+ + +Q T L A LG +HG + R G D +AL+DMY
Sbjct: 165 DMGR--SEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYA 222
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
KC L ++ + F K W+++I + + + +F+EM +
Sbjct: 223 KCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQK 270
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 119/541 (21%), Positives = 213/541 (39%), Gaps = 120/541 (22%)
Query: 19 ILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
I++ C+ N LK Q + + G + + L++ L+ S+L YA +F+ ++
Sbjct: 49 IIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKM-YLRCSHLNYAYKVFEKMSQR 107
Query: 76 NTYLYTAMITAYAS------------------------------QPAHASSAFSLYRDMV 105
+ Y MI+ YA Q + ++ DM
Sbjct: 108 DVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMG 167
Query: 106 RRGQPQPNQFIYPHVLKSCPDVLESRGTKM-VHTQIVKSGFEQYPVVETALVNSYSRSGN 164
R + +Q + VLK+C VLE G + VH IV+ GF + V +AL++ Y++
Sbjct: 168 RSEEVGFDQTTFAVVLKACS-VLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKC-K 225
Query: 165 DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQ 224
+ + K+F E+ +N V W+A +IAGC Q
Sbjct: 226 RLDDSLKIFSEIPVKNWVCWSA-------------------------------IIAGCVQ 254
Query: 225 NGLFSDAISFFRRM---GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL 281
N + F+ M G+ VS +I + LSA L++G +H + +
Sbjct: 255 NDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSA------LKVGTQLHAHALKCDF 308
Query: 282 DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEE 341
D + A +DMY KCGSL +A+R F+ K L +N++I + + ++ F+
Sbjct: 309 GSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQL 368
Query: 342 MMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK-TYR-----IEPQIEHYG- 394
+++ + + ++ +AC GR L K T R ++ YG
Sbjct: 369 LLK---SGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGK 425
Query: 395 --------CLVDLLGRA---------------GRFEEALEVVKGM---KIEPDEVVWGSL 428
C+ D + R G EE L + M ++EPD+ +GS+
Sbjct: 426 CEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSV 485
Query: 429 LNGCK----IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
L C + + +K + +D GG L ++Y + G +E +K+ ++
Sbjct: 486 LKACSSQQALNSGMEIHNRIIKSGLGLDSFVGG---ALIDMYCKCGMIEEAKKIHDRIEQ 542
Query: 485 R 485
+
Sbjct: 543 Q 543
>gi|145335149|ref|NP_172066.3| protein pigment defective 247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC007109.6, and contains two DUF17 PF|01535
domains [Arabidopsis thaliana]
gi|62320576|dbj|BAD95203.1| hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| protein pigment defective 247 [Arabidopsis thaliana]
Length = 500
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 172/458 (37%), Positives = 260/458 (56%), Gaps = 19/458 (4%)
Query: 73 TTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL-- 128
T+ T +T+ I + A A+ FS DM G +PN + +L C D
Sbjct: 32 TSETTVSWTSRINLLTRNGRLAEAAKEFS---DMTLAG-VEPNHITFIALLSGCGDFTSG 87
Query: 129 -ESRGTKMVHTQIVKSGFEQ-YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
E+ G ++H K G ++ + +V TA++ YS+ G AR +FD M D+N V+W
Sbjct: 88 SEALG-DLLHGYACKLGLDRNHVMVGTAIIGMYSKRGR-FKKARLVFDYMEDKNSVTWNT 145
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
MI GY R G + NAA +FD MP+RD+ +W ++I G + G +A+ +FR M + +
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQIS---GV 202
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
+P+ V ++ AL+A + G L G +H YV + +SN+LID+Y +CG ++ AR+
Sbjct: 203 KPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQ 262
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F K+ + SWNS+I FA +G + S+ F +M Q+ +PD VTF L AC+H
Sbjct: 263 VFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM---QEKGFKPDAVTFTGALTACSH 319
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GLVE+G YF++M YRI P+IEHYGCLVDL RAGR E+AL++V+ M ++P+EVV G
Sbjct: 320 VGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIG 379
Query: 427 SLLNGCKIYGRTD-FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
SLL C +G AE +K L +++ + ++L+N+Y GKW+ K+R+ +K
Sbjct: 380 SLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGL 439
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K PG S IE+D +H F + D H T I + LE
Sbjct: 440 GLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLE 477
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 156/423 (36%), Positives = 257/423 (60%), Gaps = 15/423 (3%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD P + A + AY+ P A L++ R + F++ VLK+C +
Sbjct: 440 VFDQSPAP----WRAFLKAYSHGP-FPLEALHLFKHA--RQHLADDTFVFTFVLKACAGL 492
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
R +H +V+ GFE + V TAL+N Y S + ARK+FDEM +NVVSW M
Sbjct: 493 GWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVE-ARKVFDEMPVKNVVSWNVM 551
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I+G+ G+++ A LFD MP R+V +W +I G T+ L+++A++ R M ++ I
Sbjct: 552 ITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHM---MAGGIS 608
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P+++T++ + AI + G + +G++++GY + G+ D+ + N+LID+Y K GS++ + +
Sbjct: 609 PSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKV 668
Query: 308 FDRNSKKR-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
FD +R L SW S+I+ FA+HG S ++ +F EM R I+P+ +TF+S++NAC+H
Sbjct: 669 FDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRA---GIKPNRITFLSVINACSH 725
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GGLVEQG A+FK M Y I+P+I+H+GC++D+LGRAGR EA ++++G+ +E + VW
Sbjct: 726 GGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWR 785
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
LL C YG E A+K + +++ +GG +L+N+ ELG++ + + RK+L R
Sbjct: 786 ILLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRK 845
Query: 487 AYK 489
K
Sbjct: 846 IVK 848
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/423 (33%), Positives = 235/423 (55%), Gaps = 9/423 (2%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L AR +F+ + + + ++I Y SQ +L++ +++ + Q ++ V+
Sbjct: 991 LACARSVFNEMLVKDVVSWNSLIGGY-SQHNRLKEVLTLFK-LMQAEEVQADKVTMVKVI 1048
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+C + + + I + E + L++ Y R G + A K+F +M D+N
Sbjct: 1049 SACTHLGDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQ-LQSAEKVFSQMKDKNT 1107
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
V+ AMI+ Y + G++ +A +FD +P++D+ +W+S+I +Q FSD++ FR+M
Sbjct: 1108 VTLNAMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRA 1167
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
++P+ V + LSA H G L LGK IH YV RN + D+ + N+LIDM+ KCG +
Sbjct: 1168 ---KVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKADTIMENSLIDMFAKCGCV 1224
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+EA + F +K SWNS+I A +G + ++ +F M+ RP+ VTF+ +L
Sbjct: 1225 QEALQVFTDMEEKDTLSWNSIILGLANNGFEDEALDIFHSML---TEGPRPNEVTFLGVL 1281
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
AC + LVE+G +F+ M + +EPQ++HYGC+VD+L RAG+ E+A+ + M + PD
Sbjct: 1282 IACANRQLVEEGLDHFERMKSVHNLEPQMKHYGCVVDILSRAGQLEKAVSFISEMPLAPD 1341
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
VVW LL C+ +G AE A KKL E+DP N ++L+NIY +W + VR+
Sbjct: 1342 PVVWRILLGACRTHGNVAVAEMATKKLSELDPGNSADSMLLSNIYASADRWSDAMNVRRW 1401
Query: 482 LKD 484
D
Sbjct: 1402 TAD 1404
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 210/446 (47%), Gaps = 26/446 (5%)
Query: 3 SVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNL 62
S Q + L+Q+ + L+ + +K+L + L G + K++R L S+L
Sbjct: 832 SDAEQARKLLDQRKIVKLQEAV-MEAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDL 890
Query: 63 TYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
A +F + +P T+L+ ++ A A A Y+ +G +P+ +P VLK
Sbjct: 891 VSAHKVFKQIESPTTFLWNTLLRGLAQSDA-PKDAIVFYKKAQEKGM-KPDNLTFPFVLK 948
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
+C + + +H ++K GF V +L+ Y+ G + AR +F+EM ++VV
Sbjct: 949 ACAKTCAPKEGEQMHNHVIKLGFLLDIFVSNSLIYLYAACGA-LACARSVFNEMLVKDVV 1007
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPA----WNSVIAGCTQNGLFSDA---ISFF 235
SW ++I GY++ +K +LF M +V A VI+ CT G +S A + +
Sbjct: 1008 SWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYI 1067
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
+EV + + C + G LQ + V+ D ++ NA+I Y
Sbjct: 1068 EHNHIEVDVYLGNTLIDYYCRI------GQLQSAE----KVFSQMKDKNTVTLNAMITAY 1117
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
K G+L A++ FD+ K L SW+SMI +++ +S+ +F +M R + ++PD V
Sbjct: 1118 AKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAK---VKPDAV 1174
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
S+L+AC H G ++ G+ + + I+ L+D+ + G +EAL+V
Sbjct: 1175 VIASVLSACAHLGALDLGK-WIHDYVRRNNIKADTIMENSLIDMFAKCGCVQEALQVFTD 1233
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFA 441
M+ E D + W S++ G G D A
Sbjct: 1234 ME-EKDTLSWNSIILGLANNGFEDEA 1258
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
+ YAR +FD + N +T +I Y +A A +L R M+ G P++ V+
Sbjct: 561 VEYARLLFDQMPCRNVVSWTGLIDGYTRACLYA-EALTLLRHMM-AGGISPSEITVLAVI 618
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD-RN 180
+ ++ +M++ K G V +L++ Y++ G+ + + K+FDEM D RN
Sbjct: 619 PAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGS-VQNSLKVFDEMLDRRN 677
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSM------PDRDVPAWNSVIAGCTQNGLFSDAISF 234
+VSWT++ISG+ G A LF M P+R + SVI C+ GL ++F
Sbjct: 678 LVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRIT--FLSVINACSHGGLVEQGLAF 735
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGML-QLGKVIHG 274
F+ M E NI P C + +G G L + ++I G
Sbjct: 736 FKSMVYEY--NIDPEIKHFGCIIDMLGRAGRLCEAEQIIEG 774
>gi|317106614|dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
Length = 514
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 149/422 (35%), Positives = 249/422 (59%), Gaps = 22/422 (5%)
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
P+ ++ +L++C + R HT+I++ G+ + +L+++Y N + +A +
Sbjct: 9 PDHQLFCDLLEACKLSQDIRTATETHTRIIRFGYGTNSSIAASLISTYVNC-NQLNLAYQ 67
Query: 172 LFDEMSDRNVVSWTAMISG-------YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQ 224
+ R V SWT ++G + R+G+ + A +F MPDRDV WNS+I G +
Sbjct: 68 VI-----RQVFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVR 122
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
NG F +A+ F+ M +S N+ P++ T ++A G L + +H + + ++++
Sbjct: 123 NGKFEEALRSFQAM---LSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQKRIEVN 179
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
+S+ALIDMY KCG ++ A+ F+ + ++ WNS+IN A+HG + +++ VF +M
Sbjct: 180 FILSSALIDMYSKCGRIETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFSKM-- 237
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
+ N+ PD +TF+ +L AC+H GLV++GR YF LM Y I+PQ+EHYG +VDLLGRAG
Sbjct: 238 -EAENVLPDSLTFLGILKACSHCGLVKEGRKYFDLMENYYSIKPQLEHYGAMVDLLGRAG 296
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLAN 464
+EA ++ M +EPD +VW LL+ C+ + T+ E AV + P +G Y ++L+N
Sbjct: 297 LLDEAYAMITAMPMEPDVIVWRILLSACRTHRNTELGEVAVANI--SGPKSGDY-VLLSN 353
Query: 465 IYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALES 524
IY +WD ++VR+M+K+ K G SW E + VH+F + DK+HP TE +Y LE
Sbjct: 354 IYCSQNRWDNAQEVREMMKEEGVRKRRGKSWFEWEDVVHRFRAGDKSHPETEALYKILEG 413
Query: 525 MV 526
++
Sbjct: 414 LI 415
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 129/302 (42%), Gaps = 51/302 (16%)
Query: 9 NQTLNQQVLAILERCNHINHLKQL--QSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYAR 66
N ++ +++ CN +N Q+ Q F T+ + N LV +++ A+
Sbjct: 45 NSSIAASLISTYVNCNQLNLAYQVIRQVFSWTVSLAGLN-----LVIDSFMRIGEYEIAK 99
Query: 67 FIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPD 126
+F + + + +MI Y + A ++ M+ +P++F + V+ +C
Sbjct: 100 KVFCKMPDRDVVTWNSMIGGYV-RNGKFEEALRSFQAMLS-SNVEPDKFTFASVITACAR 157
Query: 127 VLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
+ + +H +V+ E ++ +AL++ YS+ G I A+++F+ + +V W +
Sbjct: 158 LGALNHAQWLHDLMVQKRIEVNFILSSALIDMYSKCGR-IETAKEVFESVERNDVSVWNS 216
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
+I+G +GL DA+ F +M E N+
Sbjct: 217 LINGL-------------------------------AVHGLALDAMMVFSKMEAE---NV 242
Query: 247 RPNQVTLVCALSAIGHTGMLQLGK----VIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
P+ +T + L A H G+++ G+ ++ Y Y L+ + A++D+ G+ G L
Sbjct: 243 LPDSLTFLGILKACSHCGLVKEGRKYFDLMENY-YSIKPQLEHY--GAMVDLLGRAGLLD 299
Query: 303 EA 304
EA
Sbjct: 300 EA 301
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 154/469 (32%), Positives = 267/469 (56%), Gaps = 8/469 (1%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + + A+ +FD N L AM + Y Q A + M+ G +P++
Sbjct: 281 MKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQ-GLTKEALGVLNLMMDSG-IRPDRIS 338
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ SC + K H ++++GFE + + AL++ Y + A ++FD M
Sbjct: 339 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ-DTAFRIFDRM 397
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
S++ VV+W ++++GY G++ A F++MP++++ +WN++I+ Q ++ +AI F
Sbjct: 398 SNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFH 457
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M + N+ + VT++ SA GH G L L K I+ Y+ +N + LD + L+DM+
Sbjct: 458 YMQSQECVNV--DGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFS 515
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
+CG + A F+ + + +++W + I + A+ G E +I +F EM+ + ++PDGV
Sbjct: 516 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMI---EQGLKPDGVV 572
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
FI L AC HGGLV+QG+ F M K + + P+ HYGC+VDLLGRAG EEAL+++K M
Sbjct: 573 FIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDM 632
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
EP++V+W SLL C++ G + A FA +K+ + P G ++L+N+Y G+W+++
Sbjct: 633 PTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMA 692
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
KVR +K++ K PG S I++ + H+F S D++HP +I L+ +
Sbjct: 693 KVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDEL 741
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 177/417 (42%), Gaps = 71/417 (17%)
Query: 31 QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQ 90
Q+ + + ++ F LV F + L AR +FD ++ N +T+MI YA +
Sbjct: 154 QIHGLIIKMDYAKDLFVQNSLVHF-YAECGELDCARKVFDEMSERNVVSWTSMICGYARR 212
Query: 91 PAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPV 150
A A L+ MVR PN V+ +C + + + V+ I SG E +
Sbjct: 213 E-FAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDL 271
Query: 151 VETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR 210
+ +ALV+ Y + N I IA++LFDE N+ AM S Y R G K A + + M D
Sbjct: 272 MISALVDMYMKC-NAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMD- 329
Query: 211 DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK 270
IRP++++++ A+S+ + GK
Sbjct: 330 ---------------------------------SGIRPDRISMLSAISSCSQLRNILWGK 356
Query: 271 VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG 330
HGYV RNG + I NALIDMY KC A R FDR S K + +WNS++ + +G
Sbjct: 357 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENG 416
Query: 331 QS-------------------------------ENSICVFEEMMRCQDHNIRPDGVTFIS 359
+ E +I VF M + N+ DGVT +S
Sbjct: 417 EVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNV--DGVTMMS 474
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+ +AC H G ++ + + + K RI+ + LVD+ R G E A+ + +
Sbjct: 475 IASACGHLGALDLAKWIYYYIEKN-RIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 530
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 203/446 (45%), Gaps = 54/446 (12%)
Query: 3 SVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLV-RFCTLKL-S 60
S+ NQ +T + + L+ C I+ LK LT G KLV R C L
Sbjct: 23 SLPNQSKRT--KATPSSLKNCKTIDELKMFHLSLTKQGLDDDVSAITKLVARSCELGTRE 80
Query: 61 NLTYARFIFDHLTTPNT-YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPH 119
+L++A+ +F++ + T ++Y ++I YAS A L+ M+ G P+++ +P
Sbjct: 81 SLSFAKEVFENGESYGTCFMYNSLIRGYASS-GLCKEAILLFIRMMNSG-ISPDKYTFPF 138
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
L C + +H I+K + + V+ +LV+ Y+ G ++ ARK+
Sbjct: 139 GLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECG-ELDCARKV------- 190
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
FD M +R+V +W S+I G + DA+ F RM
Sbjct: 191 ------------------------FDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMV 226
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
+ +++ PN VT+VC +SA L+ G+ ++ ++ +G++++ + +AL+DMY KC
Sbjct: 227 RD--EDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCN 284
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
++ A+R FD L N+M +++ G ++ ++ V MM D IRPD ++ +S
Sbjct: 285 AIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMM---DSGIRPDRISMLS 341
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY----GCLVDLLGRAGRFEEALEVVKG 415
+++C+ + G++ Y + E + L+D+ + R + A +
Sbjct: 342 AISSCSQLRNILWGKS-----CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 396
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFA 441
M V W S++ G G D A
Sbjct: 397 MS-NKTVVTWNSIVAGYIENGEVDAA 421
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 169/487 (34%), Positives = 252/487 (51%), Gaps = 48/487 (9%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
N+ +R +FD + + N + AMI+AY Q A L+ +M R I +V
Sbjct: 210 NILESRRLFDQMPSRNIVSWNAMISAYV-QRCEIDEASRLFEEMPERDSVSWTTMINGYV 268
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
D +M + I +TA+++ Y + N + AR+ FDE+ +
Sbjct: 269 RIGKLDEARELLNEMPYRNIG---------AQTAMISGYIQC-NKVDEARRFFDEIGTWD 318
Query: 181 VVSWTAMISGYT-------------------------------RVGDIKNAASLFDSMPD 209
VV W AMI+GY +VG + A +F+ M +
Sbjct: 319 VVCWNAMIAGYAHHGRINEALCLSKRMVNKDMVTWNTMISCYAQVGQMDRAVKIFEEMGE 378
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
RD+ +WNS+IAG NG DA+ F MG E +P+Q++ C LS+ LQ+G
Sbjct: 379 RDLVSWNSLIAGFMLNGQNLDALKSFALMGHE---GKKPDQLSFACGLSSCATIAALQVG 435
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
+H V + G ++NALI MY KCG + EA F+ + SWNS+I +A++
Sbjct: 436 NQLHQVVVKGGYLNYLVVNNALITMYAKCGRILEAGLVFNGICHADVISWNSLIGGYAIN 495
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
G + ++ +FEEM + PD VTFI +L+AC H G+V+ G FK M+K Y IEP
Sbjct: 496 GYGKEALKLFEEM---ASEGMAPDEVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPL 552
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
EHY C+VDLLGR GR +EA E+V+GMK++ VWG+LL C+ +G + A KL
Sbjct: 553 AEHYACMVDLLGRVGRLDEAFEIVRGMKVKATAGVWGALLGACRAHGNLELGRLAAHKLS 612
Query: 450 EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLD 509
E +P+ ++L+NI+ E +W+EV++VR ++ + K PGCSW+EV QVH F S D
Sbjct: 613 EFEPHKTSNYVLLSNIHAEANRWNEVQEVRMLMNASSTVKEPGCSWVEVRNQVHGFLSDD 672
Query: 510 KTHPRTE 516
T R +
Sbjct: 673 STRSRPD 679
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 190/448 (42%), Gaps = 74/448 (16%)
Query: 45 NFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTY-----LYTAMITAYASQPAHASSAFS 99
+ +++ L+ C + + AR +FD L P +Y + AMI+ Y + + A
Sbjct: 67 DLFSWTLMITCYTRNGEVEKARELFDSL--PCSYRKGVACWNAMISGYV-KKGRVNEAKR 123
Query: 100 LYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSY 159
L+ +M P N + +L + R + + E+ V +V+ +
Sbjct: 124 LFDEM-----PVKNLISWNSMLAGYTQNRKMR----LGLEFFNEMDERDVVSWNLMVDGF 174
Query: 160 SRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVI 219
+ G D+ A K F E NVVSW M+SG+ R G+I + LFD MP R++ +WN++I
Sbjct: 175 IQVG-DLDSAWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMI 233
Query: 220 AGCTQ-------NGLFS-----DAISF------------------------FRRMGME-- 241
+ Q + LF D++S+ +R +G +
Sbjct: 234 SAYVQRCEIDEASRLFEEMPERDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIGAQTA 293
Query: 242 -VSDNIRPNQVTLVCA-LSAIGHTGMLQLGKVIHGYVY-----------RNGLDLDSFIS 288
+S I+ N+V IG ++ +I GY + + ++ D
Sbjct: 294 MISGYIQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRMVNKDMVTW 353
Query: 289 NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDH 348
N +I Y + G + A + F+ ++ L SWNS+I F L+GQ+ +++ F M
Sbjct: 354 NTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALM---GHE 410
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
+PD ++F L++C ++ G +++ K + + + L+ + + GR E
Sbjct: 411 GKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVN-NALITMYAKCGRILE 469
Query: 409 ALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
A V G+ D + W SL+ G I G
Sbjct: 470 AGLVFNGI-CHADVISWNSLIGGYAING 496
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 151/333 (45%), Gaps = 27/333 (8%)
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
E+ V ++++ Y+++G I AR LFD+M RN+VSW M+SGY G A LF
Sbjct: 3 EKNTVTYNSMISVYAKNGR-INAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFV 61
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
MP RD+ +W +I T+NG A F + + C + I +G
Sbjct: 62 IMPRRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGV-------ACWNAMI--SGY 112
Query: 266 LQLGKVIHGYVYRNGLDLDSFIS-NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
++ G+V + + + + IS N+++ Y + ++ F+ ++ + SWN M++
Sbjct: 113 VKKGRVNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVD 172
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
F G +++ F+E +P+ V+++++L+ G + + R F M
Sbjct: 173 GFIQVGDLDSAWKFFQETQ-------KPNVVSWVTMLSGFARNGNILESRRLFDQMPSR- 224
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
I + ++ + +EA + + M E D V W +++NG G+ D A
Sbjct: 225 ----NIVSWNAMISAYVQRCEIDEASRLFEEMP-ERDSVSWTTMINGYVRIGKLDEAR-- 277
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+ L E+ N G + + Y + K DE R+
Sbjct: 278 -ELLNEMPYRNIGAQTAMISGYIQCNKVDEARR 309
>gi|298205062|emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 179/529 (33%), Positives = 282/529 (53%), Gaps = 38/529 (7%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTPNTYLYTAMITAY 87
LK L + + G + KL+ FC + +L YA+ +FD + PN ++Y ++I Y
Sbjct: 4 LKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGY 63
Query: 88 ASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQ 147
S A L+R M+ G PN+F P VLK+C +VH +K G
Sbjct: 64 -SNSDDPIDAVLLFRRMICSGL-SPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGS 121
Query: 148 YPVVETALVNSYSRSGNDIGIARKLFDEMSDR---NVVSWTAMISGYTRVGDIKNAASLF 204
V+ AL+ Y G I ARKLFD+++D+ +++ A++ Y + G++ +A ++F
Sbjct: 122 LVFVQNALIAVYVVCGL-IHCARKLFDDITDKTLIDIIVRNALVDMYAKCGNLHSAQAIF 180
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM-----------------------GME 241
D +++V +W S+I+ Q+G A F +M ++
Sbjct: 181 DRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALD 240
Query: 242 VSDNIR-----PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+ + +R P++ TLV L+A G L +GK IH Y+ N + N+LIDMY
Sbjct: 241 LFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYA 300
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG + A F K L SWN +I + ALHG +I +FEEM Q PD +T
Sbjct: 301 KCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEM---QADGTLPDEIT 357
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
LL+AC+H GLV+ G YF M YR+ +IEHY C+VDLLGR G EA+E++ M
Sbjct: 358 LTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRM 417
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
++PD VVWG+LL C+I+G + + +K+L+E++P++GG ++++NIY E +W++V+
Sbjct: 418 PMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVK 477
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K+RK++ DR K S IE+D +++F DK H + IY L+ +
Sbjct: 478 KIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQL 526
>gi|125528144|gb|EAY76258.1| hypothetical protein OsI_04193 [Oryza sativa Indica Group]
Length = 565
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 255/457 (55%), Gaps = 40/457 (8%)
Query: 64 YARFIFDHLTTPNTYLYTAMITAYASQP--AHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
YAR +FD + P + Y ++I A +S A A+ +YR M+R G P PN F L
Sbjct: 76 YARNLFDQIPEPTAFCYNSLIRALSSAAGVAPAADTVLVYRRMLRAGSPLPNSFTLAFAL 135
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
K+C V + +H+Q + G E P V+T L+N Y++ ++ +AR +FD M
Sbjct: 136 KACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKC-EEVALARTVFDGM----- 189
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
VGD +++ AW+++I G ++ G+ ++A+ FR M
Sbjct: 190 ------------VGD-------------KNLAAWSAMIGGYSRVGMVNEALGLFREMQ-- 222
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+ ++ P++VT+V +SA G L LG+ +H ++ R G+ +D +S ALIDMY KCG +
Sbjct: 223 -AADVNPDEVTMVSVISACAKAGALDLGRWVHAFIDRKGITVDLELSTALIDMYAKCGLI 281
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+ A+ FD +++ +W++MI A+HG E ++ +F M+ + +RP+ VTFI +L
Sbjct: 282 ERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELK---VRPNNVTFIGVL 338
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
+AC H GLV +GR Y+ M + I+P +E+YGC+VDL R+ +EA V GM I P+
Sbjct: 339 SACAHSGLVNEGRRYWSTM-QELGIKPSMENYGCMVDLFCRSSLLDEAYSFVTGMAIPPN 397
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
V+W +LL K R D + A KKL+E++P N ++L+N+Y +WD V +RK
Sbjct: 398 SVIWRTLLVASKNSNRFDIVQSASKKLLELEPCNPENYVLLSNLYASNSQWDRVSYMRKK 457
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
+K+ N GCS IE++ +H+F D +HP +EI
Sbjct: 458 MKENNVNVVAGCSSIEINGYLHKFVVSDDSHPEIKEI 494
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 164/498 (32%), Positives = 274/498 (55%), Gaps = 15/498 (3%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
KQ+ G F LV F K ++ A +FD + + +IT Y S
Sbjct: 105 KQVHCHAIVRGLLGDIFVQTALVDFYA-KNGDMDCAVKVFDEMPVKDPIPMNCLITGY-S 162
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
+ A L+ MVRR N I + E + + +++ G
Sbjct: 163 KSGDVVKARRLFDGMVRRTSASWNSMIACYAHGG-----EYQEALRLFRRMLSEGARPNA 217
Query: 150 VVETALVNSYSRSGN-DIG-IARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM 207
+ + + +++G+ + G AR L E +N++ TA++ Y + I A FD M
Sbjct: 218 ITIATMFSICAKTGDLETGKWARSLIAEQDLQNMIVHTALMEMYVKCQAIDEARREFDRM 277
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
RDV AW+++IAG QNG +++ F RM + + +PN+VTLV LSA G +
Sbjct: 278 QQRDVVAWSTMIAGYAQNGRPHESLELFERMK---ATSCKPNEVTLVGVLSACAQLGSDE 334
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFA 327
LG I +V L L S++ +ALIDMY KCG + AR F+R K + +WNSM+ A
Sbjct: 335 LGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLA 394
Query: 328 LHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIE 387
L+G ++++I +++EM + +++P+ +TF++LL ACTH GLV+QG ++FK M + +
Sbjct: 395 LNGFAQDAITLYKEM---TEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVS 451
Query: 388 PQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKK 447
PQ+EH C+VDLL ++GR EA + + M++EP+ V+W +LL+ C+ + + A+ A K
Sbjct: 452 PQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAASK 511
Query: 448 LIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHS 507
L+ ++P+N ++L+NIY + G W +VR++R +++ +N K SWIE+D +VH+F
Sbjct: 512 LLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELDGEVHKFLV 571
Query: 508 LDKTHPRTEEIYDALESM 525
D HP++ EI++ ++ M
Sbjct: 572 QDTYHPKSAEIFNVVDGM 589
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 200/401 (49%), Gaps = 16/401 (3%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + P L +I+A + +H + + RRG P + P V+KSC
Sbjct: 38 ARHLFDAVPRPTPALCGTLISALSRLCSH-QELLDAFSSLHRRGSDVPPGCV-PLVVKSC 95
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ SR K VH + G V+TALV+ Y+++G D+ A K+FDEM ++ +
Sbjct: 96 AILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNG-DMDCAVKVFDEMPVKDPIPM 154
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+I+GY++ GD+ A LFD M R +WNS+IA G + +A+ FRRM +S+
Sbjct: 155 NCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRM---LSE 211
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
RPN +T+ S TG L+ GK + L + + AL++MY KC ++ EA
Sbjct: 212 GARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHTALMEMYVKCQAIDEA 270
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
RR FDR ++ + +W++MI +A +G+ S+ +FE M + + +P+ VT + +L+AC
Sbjct: 271 RREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERM---KATSCKPNEVTLVGVLSAC 327
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYG-CLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
G E G ++ + P + G L+D+ + G A V M+ +
Sbjct: 328 AQLGSDELG-GQIGSHVESQNL-PLTSYLGSALIDMYTKCGHVGRARSVFNRME-HKVVI 384
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEID--PNNGGYGIML 462
W S++ G + G A K++ E D PN + +L
Sbjct: 385 TWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALL 425
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 158/461 (34%), Positives = 268/461 (58%), Gaps = 19/461 (4%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A +FD + + YTA+IT YAS+ + SA ++ ++ P + + ++
Sbjct: 157 AHKVFDGSSHRDVVSYTALITGYASR-GYIESAQKMFDEI-----PVKDVVSWNAIISGY 210
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR----N 180
D ++ + +++K+ + +V++ ++SG+ I + R++ + D N
Sbjct: 211 ADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGS-IQLGRQVHSWIDDHGLGSN 269
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
+ A+I Y++ G+++ A LF + ++DV +WN++I G T L+ +A+ F+ M +
Sbjct: 270 LKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEM-L 328
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR--NGLDLDSFISNALIDMYGKC 298
+N PN VT++ L A G + G+ IH Y+ + G+ S + +LIDMY KC
Sbjct: 329 RSGEN--PNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKC 386
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G ++ A + F+ + L++ N+MI FA+HG++ + +F M + + I PD +TF+
Sbjct: 387 GDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRK---NGIEPDDITFV 443
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
LL+AC+H G+++ GR F+ MT+ Y+I P++EHYGC++DLLG G F+EA E++ M +
Sbjct: 444 GLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTM 503
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
EPD V+W SLL CK++G + E +KLI+I+P N G ++L+NIY G+W+EV +
Sbjct: 504 EPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANI 563
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
R +L D+ K PGCS IE+D VH+F DK HPR EIY
Sbjct: 564 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 147/508 (28%), Positives = 250/508 (49%), Gaps = 54/508 (10%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFD 70
N L++L C + L+ + + + G TN+ +L+ FC L L YA +F+
Sbjct: 2 NHPSLSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFE 61
Query: 71 HLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
+ PN ++ M +A S P SA LY M+ G PN + +P +LKSC +
Sbjct: 62 TIQEPNLLIWNTMFRGHALSSDPV---SAIKLYVCMISLGL-LPNSYTFPFLLKSCAKLK 117
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
S+ + +H ++K G+E V T+L++ Y ++G A K+FD S R+VVS+TA+I
Sbjct: 118 VSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGR-WKDAHKVFDGSSHRDVVSYTALI 176
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
+GY G I++A +FD +P +DV +WN++I+G G +A+ F+ M + N++P
Sbjct: 177 TGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEM---MKTNVKP 233
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
++ T+V +SA +G +QLG+ +H ++ +GL + I NALID+Y KCG ++ A F
Sbjct: 234 DESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLF 293
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
S K + SWN+MI + + ++ +F+EM+R ++ P+ VT +S+L AC G
Sbjct: 294 QGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGEN---PNDVTMLSILPACAQLG 350
Query: 369 LVEQGRAYFKLMTKTYR-IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK---------- 417
++ GR + K + + L+D+ + G E A +V M
Sbjct: 351 AIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAM 410
Query: 418 ------------------------IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--- 450
IEPD++ + LL+ C G D + + +
Sbjct: 411 IFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYK 470
Query: 451 IDPNNGGYGIMLANIYGELGKWDEVRKV 478
I P YG M+ ++ G LG + E ++
Sbjct: 471 ITPKLEHYGCMI-DLLGHLGLFKEAEEM 497
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 174/530 (32%), Positives = 274/530 (51%), Gaps = 85/530 (16%)
Query: 76 NTYLYTAMITAYASQPAHA-----------SSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
+++ + + A AS P + S + SLYR M+R G P+ F +P +LKSC
Sbjct: 5 TSFVRNSAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGS-SPDAFSFPFILKSC 63
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE--MSDRNVV 182
+ + +H + K G E P V TAL++ Y + G + ARK+F+E S + V
Sbjct: 64 ASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGL-VADARKVFEENPQSSQLSV 122
Query: 183 SWTAMISGYTRVGDIKNAASLFDSM----------------PDRDVPAW----NSVIAGC 222
+ A+ISGYT + +AA +F M P VP + S+ C
Sbjct: 123 CYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQC 182
Query: 223 TQNGLFSDA------ISFFRRMG------------------------------------M 240
+ GL S+ I+ + + G +
Sbjct: 183 VKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVL 242
Query: 241 EVSDNIR-----PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
E+ + ++ P+ TLV LS+ H G ++G + V NG + F+SNA I MY
Sbjct: 243 ELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMY 302
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
+CG+L +AR FD K L SW +MI + +HG E + +F++M++ IRPDG
Sbjct: 303 ARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIK---RGIRPDGA 359
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
F+ +L+AC+H GL ++G F+ M + Y++EP EHY CLVDLLGRAGR +EA+E ++
Sbjct: 360 VFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIES 419
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M +EPD VWG+LL CKI+ D AE A K+IE +PNN GY ++++NIY + + +
Sbjct: 420 MPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGI 479
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
++R M+++R K PG S++E +VH F + D++H +TEE++ L+ +
Sbjct: 480 WRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 168/468 (35%), Positives = 258/468 (55%), Gaps = 20/468 (4%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+ L AR +FD L + LY MI AY + A L+ M P+ N
Sbjct: 151 RCGRLDDARRVFDRLLVKDAQLYNTMIAAYM-EAGEVELAEELFEVM-----PERN---- 200
Query: 118 PHVLKSCPDVLESRGT--KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
H L +RG H + +G V+ TA+++ ++++G+ + AR +FD
Sbjct: 201 THTLMEMVGGYSARGDMDSAKHVFEMANGVVNM-VLCTAMISGFAKTGS-VDDARSVFDG 258
Query: 176 MSDRNVVSWTAMIS-GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
M R+V +W MI Y + G +++A +FD+MP+R+V W S+I+G TQ G F A+
Sbjct: 259 MRQRDVATWNVMIGVMYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQVGKFKQAVKL 318
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
FR M + ++ + T+ +S+ G G L LG+ +H Y +GL + N+LIDM
Sbjct: 319 FRDMQI---SGVKADDATIATVVSSCGQMGALDLGRYVHAYCDVHGLGKGISVKNSLIDM 375
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KCG +K+A F K+ SW MI FA++G S ++ +F +M ++ + P+
Sbjct: 376 YSKCGDIKKAHEIFRGLVKRDDFSWTVMIMGFAVNGLSGEALDLFAQME--EEGEVMPNE 433
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
+TF+ +L +C+HGGLVEQG +F M+K Y I P+IEHYGC+VDLLGRA EA + ++
Sbjct: 434 ITFLGVLTSCSHGGLVEQGYHHFHRMSKVYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIE 493
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M I PD +W SLL C+ G AE+ +++ E++P+ G ++L+N+Y +W +
Sbjct: 494 EMPIAPDVAIWRSLLFACRARGEVGLAEYVAERVEELEPSRCGGNVLLSNVYATTSRWVD 553
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
V KVR + K PGCS IEV+ H+F S D+TH TE IY+ L
Sbjct: 554 VNKVRTGMGRSRVSKRPGCSVIEVNGCAHEFLSGDETHLETEAIYNIL 601
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 15/249 (6%)
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
DA++ + +M +RP T+ L A ML+ G+ +H +V++NG D I+
Sbjct: 85 DAVALYAQM-HRGCPGVRPLTFTVSSVLKAAARREMLREGEQVHVHVFKNGFQTDERIAT 143
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
L+D+Y +CG L +ARR FDR K +N+MI ++ G+ E + +FE M H
Sbjct: 144 TLVDLYARCGRLDDARRVFDRLLVKDAQLYNTMIAAYMEAGEVELAEELFEVMPERNTH- 202
Query: 350 IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEA 409
T + ++ + G ++ + F++ + ++ + G ++A
Sbjct: 203 ------TLMEMVGGYSARGDMDSAKHVFEMANGVVNMVLCT----AMISGFAKTGSVDDA 252
Query: 410 LEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGEL 469
V GM+ + D W ++ +Y + E A K + N + + Y ++
Sbjct: 253 RSVFDGMR-QRDVATWNVMIG--VMYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQV 309
Query: 470 GKWDEVRKV 478
GK+ + K+
Sbjct: 310 GKFKQAVKL 318
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 163/528 (30%), Positives = 275/528 (52%), Gaps = 45/528 (8%)
Query: 2 VSVTNQLNQTLNQQVLAILERCNHINHLKQLQS-FLTTLGQSQTNFYAFKLVRFCTLKLS 60
+ + + ++T + L +L C ++ LKQ+ + + ++ + + + + L
Sbjct: 14 IEIKGENSKTHQSRFLHLLTDCTDLSKLKQIHAQAIRNFSTHNSSLFLYSRILHVS-SLI 72
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
+ YA +F+ + PN++++ +I A A A ++ M+ G +P++ +P +
Sbjct: 73 DFDYACRVFNQIDNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEGSVEPDKHTFPFL 132
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
LK+C V + H QI K G D +
Sbjct: 133 LKACAYVFALSEGRQAHAQIFKLGL--------------------------------DLD 160
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
V ++I Y G + A +F+ MP R + +WN +I Q+GLF +A+ F +
Sbjct: 161 VYVGNSLIHLYASCGCLSMALKVFEKMPLRSLVSWNVMIDAYVQSGLFENALKLF----V 216
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG---LDLDSFISNALIDMYGK 297
E+ ++ P+ T+ +SA G L LG H YV R + D I+++L+DMY K
Sbjct: 217 EMQNSFEPDGYTMQSIVSACAGIGALSLGMWAHAYVLRKASGAMAGDVLINSSLVDMYSK 276
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CGSL+ A++ F+ K L SWNSMI + A+HG+ + ++ F ++ + P+ VTF
Sbjct: 277 CGSLRMAQQVFETMPKHDLNSWNSMILALAMHGRGQAALQCFSRLVEME--KFLPNSVTF 334
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+ +L+AC HGG+V GR YF +M Y+IEP++EHYGCLVDLL R+G +EALE+V M
Sbjct: 335 VGVLSACNHGGMVADGRKYFDMMVNDYKIEPRLEHYGCLVDLLSRSGFIDEALELVANMH 394
Query: 418 IEPDEVVWGSLLNGC-KIYGRTDFAEFAVKKLIEIDPN-NGGYGIMLANIYGELGKWDEV 475
I+PD V+W SLL+ C K + +E K+++ + + G +ML+ +Y +W++V
Sbjct: 395 IKPDAVIWRSLLDACYKQNAGVELSEEVAFKILQSEKTISSGVYVMLSRVYASARQWNDV 454
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
+RK++ D K PGCS IE+D H+F + D +HPR +EIY ++
Sbjct: 455 GIIRKVMTDMGVTKEPGCSSIEIDGISHEFFAGDTSHPRIKEIYGVID 502
>gi|357453191|ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 241/421 (57%), Gaps = 11/421 (2%)
Query: 107 RGQPQPNQFIYPHVLKSC---PDVLESRGTKMVHTQIVKSGFEQYPV-VETALVNSYSRS 162
+ +PN +L +C P +HT K GF V V TAL++ Y++
Sbjct: 80 EAEVEPNHITLITLLSACAHSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKC 139
Query: 163 GNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC 222
G + AR +FD+M RN+VSW MI GY + GD+ +A LFD +P ++V +W VI G
Sbjct: 140 GK-LDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGF 198
Query: 223 TQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLD 282
+ + +A+ FR M + + P+ VT++ +SA + G L LG +H V +
Sbjct: 199 VKKECYEEALECFREMQLA---GVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFR 255
Query: 283 LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM 342
+ + N+LIDMY +CG ++ AR+ FD S++ L SWNS+I FA++G ++ ++ F M
Sbjct: 256 DNVKVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSM 315
Query: 343 MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGR 402
+ + P+GV++ S L AC+H GL+++G F + + +R P+IEHYGCLVDL R
Sbjct: 316 KK---EGLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSR 372
Query: 403 AGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIML 462
AGR +EA +V+K M + P+EVV GSLL C+ G + AE +K +E+ P ++
Sbjct: 373 AGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYPGGDSNYVLF 432
Query: 463 ANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+NIY +GKWD KVR+ +K+R K S IE+D +H+F S DK H + IY AL
Sbjct: 433 SNIYAAVGKWDGASKVRREMKERGLQKNLAFSSIEIDSGIHKFVSGDKYHEENDYIYSAL 492
Query: 523 E 523
E
Sbjct: 493 E 493
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 132/312 (42%), Gaps = 72/312 (23%)
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
VSWT+ IS + C N A F + + E
Sbjct: 53 VSWTSSISHH------------------------------CKNNNFLKAASEFIQMLEAE 82
Query: 242 VSDNIRPNQVTLVCALSAIGHT---GMLQLGKVIHGYVYRNGLDL-DSFISNALIDMYGK 297
V PN +TL+ LSA H+ + G +H + +++G + D + ALIDMY K
Sbjct: 83 V----EPNHITLITLLSACAHSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAK 138
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF------------------ 339
CG L AR FD+ + L SWN+MI+ + +G ++++ +F
Sbjct: 139 CGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGF 198
Query: 340 ------EEMMRC----QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL-MTKTYRIEP 388
EE + C Q + PD VT I++++AC + G + G +L M K +R
Sbjct: 199 VKKECYEEALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFR--D 256
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD--FAEFAVK 446
++ L+D+ R G E A +V GM + + V W S++ G + G D + F
Sbjct: 257 NVKVLNSLIDMYARCGCIELARQVFDGMS-QRNLVSWNSIIVGFAVNGLADKALSFFRSM 315
Query: 447 KLIEIDPNNGGY 458
K ++PN Y
Sbjct: 316 KKEGLEPNGVSY 327
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 127/322 (39%), Gaps = 74/322 (22%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L YAR +FD + N + MI Y A L+ + + I
Sbjct: 138 KCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKN-GDVDDALKLFDKLPVKNVVSWTVVIG 196
Query: 118 PHVLKSC-----------------PDV------------LESRGTKM-VHTQIVKSGFEQ 147
V K C PD L + G + VH ++K F
Sbjct: 197 GFVKKECYEEALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRD 256
Query: 148 YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM 207
V +L++ Y+R G I +AR++FD MS RN+VSW ++I G+
Sbjct: 257 NVKVLNSLIDMYARCGC-IELARQVFDGMSQRNLVSWNSIIVGF---------------- 299
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
NGL A+SFFR M E + PN V+ AL+A H G++
Sbjct: 300 ---------------AVNGLADKALSFFRSMKKE---GLEPNGVSYTSALTACSHAGLID 341
Query: 268 LGKVIHGYV---YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
G I + +RN ++ + L+D+Y + G LKE A+D K + ++
Sbjct: 342 EGLKIFADIKRDHRNSPRIEHY--GCLVDLYSRAGRLKE---AWDVIKKMPMMPNEVVLG 396
Query: 325 SFALHGQSENSICVFEEMMRCQ 346
S +++ + + E++M+ Q
Sbjct: 397 SLLAACRTQGDVELAEKVMKYQ 418
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 161/487 (33%), Positives = 262/487 (53%), Gaps = 13/487 (2%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
+ + +++L +L +HL ++ G Q+N V C L + YA +F
Sbjct: 5 REIERKILRLLHGGKTRSHLTEIHGHFLRHGLQQSNQILAHFVSVCA-SLRRVPYATRLF 63
Query: 70 DHLTTPNTYLYTAMITAYASQPA-HASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
H PN L+ A+I A++ P HAS FS + M R P+++ + KS ++
Sbjct: 64 AHTHNPNILLFNAIIKAHSLHPPFHAS--FSFFSLMKTRAI-SPDEYTLAPLFKSASNLR 120
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
VH +V+ GF ++ V A + Y+ S +G A K+FDEM D +VV W MI
Sbjct: 121 YYVLGGCVHAHVVRLGFTRHASVRVAALEVYA-SCERMGDASKVFDEMRDPDVVVWNLMI 179
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
G+ ++GD++ +F M +R V +WN +++ +N A+ F M + P
Sbjct: 180 RGFCKMGDLETGMKVFGQMKERTVVSWNLMMSCLAKNNKEEKALELFNEM---LEQGFEP 236
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSF-ISNALIDMYGKCGSLKEARRA 307
+ +LV L G + +G+ IH Y G D+ + N+L+D Y KCG+L+ A
Sbjct: 237 DDASLVTVLPVCARLGAVDIGEWIHSYANSKGFLQDTINVGNSLVDFYCKCGNLQAAWSI 296
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F+ + K + SWN+MI+ A +G+ E + +FEEM+ P+ TF+ +L C H
Sbjct: 297 FNDMASKNVVSWNAMISGLAYNGEGEVGVNLFEEMVH---GGFEPNDSTFVGVLACCAHV 353
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GLV++GR F M+ +++ P++EHYGC+VDLLGR G EA +++ M ++P +WG+
Sbjct: 354 GLVDRGRDLFASMSVKFKVSPKLEHYGCVVDLLGRCGHVREARDLITSMPLKPTAALWGA 413
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LL+ C+ YG + AE A K+L+ ++P N G ++L+N+Y E G+WDEV KVR +++
Sbjct: 414 LLSACRTYGDREIAENAAKELVRLEPWNSGNYVLLSNVYAEEGRWDEVEKVRVLMRGGGV 473
Query: 488 YKTPGCS 494
K PG S
Sbjct: 474 KKVPGQS 480
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 164/498 (32%), Positives = 274/498 (55%), Gaps = 15/498 (3%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
KQ+ G F LV F K ++ A +FD + + +IT Y S
Sbjct: 105 KQVHCHAIVRGLLGDIFVQTALVDFYA-KNGDMDCAVKVFDEMPVKDPIPMNCLITGY-S 162
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
+ A L+ MVRR N I + E + + +++ G
Sbjct: 163 KSGDVVKARRLFDGMVRRTSASWNSMIACYAHGG-----EYQEALRLFRRMLSEGARPNA 217
Query: 150 VVETALVNSYSRSGN-DIG-IARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM 207
+ + + +++G+ + G AR L E +N++ TA++ Y + I A FD M
Sbjct: 218 ITIATMFSICAKTGDLETGKWARSLIAEQDLQNMIVHTALMEMYVKCRAIDEARREFDRM 277
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
RDV AW+++IAG QNG +++ F RM + + +PN+VTLV LSA G +
Sbjct: 278 QQRDVVAWSTMIAGYAQNGRPHESLELFERMK---ATSCKPNEVTLVGVLSACAQLGSDE 334
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFA 327
LG I +V L L S++ +ALIDMY KCG + AR F+R K + +WNSM+ A
Sbjct: 335 LGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLA 394
Query: 328 LHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIE 387
L+G ++++I +++EM + +++P+ +TF++LL ACTH GLV+QG ++FK M + +
Sbjct: 395 LNGFAQDAITLYKEM---TEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVS 451
Query: 388 PQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKK 447
PQ+EH C+VDLL ++GR EA + + M++EP+ V+W +LL+ C+ + + A+ A K
Sbjct: 452 PQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAASK 511
Query: 448 LIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHS 507
L+ ++P+N ++L+NIY + G W +VR++R +++ +N K SWIE+D +VH+F
Sbjct: 512 LLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELDGEVHKFLV 571
Query: 508 LDKTHPRTEEIYDALESM 525
D HP++ EI++ ++ M
Sbjct: 572 QDTYHPKSAEIFNVVDGM 589
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 200/401 (49%), Gaps = 16/401 (3%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + P L +I+A + +H + + RRG P + P V+KSC
Sbjct: 38 ARHLFDAVPRPTPALCGTLISALSRLCSH-QELLDAFSSLHRRGSDVPPGCV-PLVVKSC 95
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ SR K VH + G V+TALV+ Y+++G D+ A K+FDEM ++ +
Sbjct: 96 AILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNG-DMDCAVKVFDEMPVKDPIPM 154
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+I+GY++ GD+ A LFD M R +WNS+IA G + +A+ FRRM +S+
Sbjct: 155 NCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRM---LSE 211
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
RPN +T+ S TG L+ GK + L + + AL++MY KC ++ EA
Sbjct: 212 GARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHTALMEMYVKCRAIDEA 270
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
RR FDR ++ + +W++MI +A +G+ S+ +FE M + + +P+ VT + +L+AC
Sbjct: 271 RREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERM---KATSCKPNEVTLVGVLSAC 327
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYG-CLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
G E G ++ + P + G L+D+ + G A V M+ +
Sbjct: 328 AQLGSDELG-GQIGSHVESQNL-PLTSYLGSALIDMYTKCGHVGRARSVFNRME-HKVVI 384
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEID--PNNGGYGIML 462
W S++ G + G A K++ E D PN + +L
Sbjct: 385 TWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALL 425
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 157/457 (34%), Positives = 253/457 (55%), Gaps = 42/457 (9%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ +FD + + + AMI+ YA + A L+ +M++ +P++ Y VL +C
Sbjct: 149 AQKLFDEIPVKDVVSWNAMISGYAETGCY-KEALELFEEMMKM-NVRPDESTYVTVLSAC 206
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ VH+ + GF D N+
Sbjct: 207 AHSGSIELGRQVHSWVDDHGF--------------------------------DSNLKIV 234
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
A+I Y++ G+++ A LF + +DV +WN++I G T L+ +A+ F+ M +
Sbjct: 235 NALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEM---LRS 291
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR--NGLDLDSFISNALIDMYGKCGSLK 302
PN VT++ L A H G + +G+ IH Y+ + G+ S + +LIDMY KCG ++
Sbjct: 292 GETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIE 351
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
A + F+ K L+SWN+MI FA+HG+++ S +F M + I PD +TF+ LL+
Sbjct: 352 AAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI---GIEPDDITFVGLLS 408
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H G+++ GR F+ MT+ Y++ P++EHYGC++DLLG +G F+EA E++ M++EPD
Sbjct: 409 ACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDG 468
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
V+W SLL CK++G + AE + LI+I+P N I+L+NIY G+W++V ++R +L
Sbjct: 469 VIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALL 528
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
+ K PGCS IEVD V +F DK HP+ EIY
Sbjct: 529 NGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIY 565
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 134/412 (32%), Positives = 224/412 (54%), Gaps = 19/412 (4%)
Query: 51 LVRFC--TLKLSNLTYARFIFDHLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVR 106
L+ C + L YA +F+ + PN ++ MI +A S P S+ +LY MV
Sbjct: 1 LIELCVPSPHFDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPV---SSLTLYVCMVS 57
Query: 107 RGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDI 166
G PN + +P +LKSC + +H Q++K GF+ V T+L++ Y ++ +
Sbjct: 58 LGL-LPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWR-L 115
Query: 167 GIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNG 226
A K+FD S R+VVS+TA+I+GY GDI++A LFD +P +DV +WN++I+G + G
Sbjct: 116 EDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETG 175
Query: 227 LFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSF 286
+ +A+ F M + N+RP++ T V LSA H+G ++LG+ +H +V +G D +
Sbjct: 176 CYKEALELFEEM---MKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLK 232
Query: 287 ISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQ 346
I NALID+Y KCG ++ A F S K + SWN++I + + ++ +F+EM+R
Sbjct: 233 IVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 292
Query: 347 DHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR-IEPQIEHYGCLVDLLGRAGR 405
+ P+ VT +S+L AC H G ++ GR + K + + L+D+ + G
Sbjct: 293 E---TPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGD 349
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD--FAEFAVKKLIEIDPNN 455
E A +V M + W +++ G ++GR D F F+ + I I+P++
Sbjct: 350 IEAAHQVFNSM-LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDD 400
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 169/518 (32%), Positives = 275/518 (53%), Gaps = 54/518 (10%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLT------YA 65
L +V++++ RC + L+ + L + YAF L + + YA
Sbjct: 19 LEARVVSLVRRCPGLRALRGAHAHFLRLRLPRLT-YAFALSKLLASCAAASATTVASSYA 77
Query: 66 RFIFDHLTTPNTYLYTAMITAYASQPAH----ASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
R +FD + P + Y ++I A + + + F LYR M+ G P PN F VL
Sbjct: 78 RALFDQIPEPTAFCYNSLIRAVSGSGSSSNSGTTDTFLLYRRMLHAGSPAPNSFTLAFVL 137
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
K+C + E + +H Q G E P V+T L+N Y+R ++ +AR
Sbjct: 138 KACTALGEG---QQLHAQAFGHGLEPSPYVQTGLLNLYARC-EEVALAR----------- 182
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSM-PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
++FD M D+++ AW+S+I G ++ G+ ++A+ FR M
Sbjct: 183 --------------------NVFDGMVEDKNLVAWSSMIGGYSRMGMVNEALGLFRDMQ- 221
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ + P++VT+V +SA G L LGK +H ++ R G+ +D +S ALIDMY KCG
Sbjct: 222 --AVGVNPDEVTMVSVISACAKAGALDLGKWVHAFIDRKGITVDLELSTALIDMYAKCGL 279
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
++ A+ FD ++ +W++MI A+HG +E+++ +F M++ + +RP+ VTF+ +
Sbjct: 280 IERAKSVFDSMVERDTKAWSAMIVGLAMHGLAEDALGLFSRMLQLK---VRPNNVTFVGV 336
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC H GLV+ GR Y+ M + IE +E+YGC+VDLL R+G +EA V GM I P
Sbjct: 337 LSACAHSGLVDDGRRYWCTM-QELGIEASMENYGCMVDLLCRSGLLDEAFSFVTGMPISP 395
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
+ V+W +LL K R D E A ++L E++P N ++L+N+Y +WD VR +RK
Sbjct: 396 NSVIWRNLLVASKSSNRIDIVELASRRLFELEPQNPENYVLLSNLYALNSQWDRVRYMRK 455
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
+KD N GCS IE++ +H+F D +HP ++I
Sbjct: 456 KMKDNNVTVVAGCSSIEINGYLHKFVVSDGSHPEIKKI 493
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 174/529 (32%), Positives = 277/529 (52%), Gaps = 55/529 (10%)
Query: 5 TNQLNQTLNQQVLAILERCNHINHLKQLQ--SFLTTLGQSQTNFYAF-KLVRFCTLKLSN 61
TN N L L C ++ LKQ+ S +TL T + + +++ F +L +
Sbjct: 19 TNHYNLLLQH-----LNECKDMSQLKQIHALSLRSTLPNHSTTLFLYSRILHFSSLH--D 71
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYA-SQPAHAS-SAFSLYRDMVRRGQPQPNQFIYPH 119
L YA +FD + PN++++ +I A A SQ H A LY M++R P P+ +P
Sbjct: 72 LNYAYRVFDQVDNPNSFMWNILIRACAQSQSVHLKREAILLYNTMLQRSSPFPDNHTFPF 131
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
VLK+C + K H ++K GF+ + +L++ Y+ G+ + A+ +FD+M R
Sbjct: 132 VLKACAYLFALFEGKQAHAHLLKLGFQSDVYINNSLIHFYASCGS-LESAKNVFDKMPQR 190
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
++VSW AMI + G+ + A
Sbjct: 191 SLVSWNAMIDAFVLFGEFETALQ----------------------------------LFV 216
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN-GLDLDS---FISNALIDMY 295
P+ T+ ++A L LG H ++ RN G+ + ++N+L+DMY
Sbjct: 217 QFQQQFFEPDGYTIQSVINACAGLCALSLGMWAHAFLLRNCGVSVARDHVLVNNSLLDMY 276
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCGSL A + F+ K +TSWNSMI FA+HG+ E ++ FE M+R P+ +
Sbjct: 277 CKCGSLDIATQIFEGMQKHDVTSWNSMILGFAMHGKGELALECFERMIRIS--RFVPNSI 334
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF+ +L+AC H +V +GR YF +M Y+IEPQ+EHYGCLVD+L RAG +EALE+V
Sbjct: 335 TFVGVLSACNHRYMVNEGRKYFDMMVNEYKIEPQLEHYGCLVDILARAGLIDEALELVAS 394
Query: 416 MKIEPDEVVWGSLLNG-CKIYGRTDFAEFAVKKLIEI-DPNNGGYGIMLANIYGELGKWD 473
M ++PD V+W SLL+ CK + +E ++++E + ++ G ++L+ +Y +W+
Sbjct: 395 MPMKPDVVIWRSLLDSCCKKNASVELSENIARQILESEEADSSGVYVLLSRVYASASRWN 454
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+V VRK++ + K PGCS IEVD H+F + D +HP+T+EIY L
Sbjct: 455 DVGLVRKLMTNNGILKEPGCSLIEVDGVTHEFFAGDTSHPQTKEIYQVL 503
>gi|222628408|gb|EEE60540.1| hypothetical protein OsJ_13880 [Oryza sativa Japonica Group]
Length = 594
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 258/441 (58%), Gaps = 10/441 (2%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + + M+ Y Q + A L+ M +R + P+Q I VL +C
Sbjct: 123 ARRVFDGMPDRDLVAWGVMLDCYC-QARNYEEALLLFHSM-KRSRVVPDQVIIATVLSTC 180
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
R K +H+ ++ S V AL+N Y+ S D+ +A KL++ +S++ +V
Sbjct: 181 AHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYA-SCADMEMAEKLYNRVSEKEIVLS 239
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T M+ GY + G ++ A S+F+ MP +DV +W+++IAG ++ +A++ F M
Sbjct: 240 TTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLFHDMQ---RS 296
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
++P+++T++ +SA + G L+ + IH +V + + I NALIDM+ KCGSL A
Sbjct: 297 GVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKILPIGNALIDMFSKCGSLTLA 356
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F+ +K + +W S+I + A+HG +++ +FE M + I+P+GVTF+ LL AC
Sbjct: 357 LDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENM---KSEGIQPNGVTFLGLLYAC 413
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
H GLVE+GR FK+M + YRIEP EHYGC+VDLLGRA +A ++++ M + P+ V+
Sbjct: 414 CHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPNVVI 473
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WGSLL C+++G + FA KK++E+DPN+GG ++L+NIY E G W++V++ KD
Sbjct: 474 WGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQVLLSNIYAEYGNWNDVKEGLSK-KD 532
Query: 485 RNAYKTPGCSWIEVDKQVHQF 505
K ++E+ + F
Sbjct: 533 YEKKKELAARFLEISADLSNF 553
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 152/331 (45%), Gaps = 42/331 (12%)
Query: 158 SYSRSGNDIGIARKL-FDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWN 216
+++RS G A L F ++ + TA++ Y G +++A +FD MPDRD+ AW
Sbjct: 80 AFARSLGTAGAAHGLAFRVGAEVDGFVGTALVRAYAACGRVEDARRVFDGMPDRDLVAWG 139
Query: 217 SVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV 276
++ Q + +A+ F M + P+QV + LS HT L+ GK IH Y+
Sbjct: 140 VMLDCYCQARNYEEALLLFHSMK---RSRVVPDQVIIATVLSTCAHTRNLRFGKAIHSYM 196
Query: 277 YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL-------------------- 316
+ +D+ +S AL++MY C ++ A + ++R S+K +
Sbjct: 197 LVSDTLIDAQVSCALMNMYASCADMEMAEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAH 256
Query: 317 -----------TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
SW++MI +A + ++ +F +M R ++PD +T +S+++AC
Sbjct: 257 SIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLFHDMQR---SGVKPDEITMLSVISACA 313
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
+ G +E+ R + + + + + L+D+ + G AL+V M + + V W
Sbjct: 314 NVGALEKARCIHSFV-ENHSMCKILPIGNALIDMFSKCGSLTLALDVFNAMP-QKNVVTW 371
Query: 426 GSLLNGCKIY--GRTDFAEFAVKKLIEIDPN 454
S++ ++ GR+ F K I PN
Sbjct: 372 TSIITASAMHGDGRSALTLFENMKSEGIQPN 402
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 9/174 (5%)
Query: 208 PDRDVP-AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGML 266
PD D+ A+ SVI L A + RR+G+ P + L L AI L
Sbjct: 31 PDPDLDRAYISVIRAAAAPRLALAAFACLRRVGLPA-----PGRRALPSLLRAIAFARSL 85
Query: 267 QLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSF 326
HG +R G ++D F+ AL+ Y CG +++ARR FD + L +W M++ +
Sbjct: 86 GTAGAAHGLAFRVGAEVDGFVGTALVRAYAACGRVEDARRVFDGMPDRDLVAWGVMLDCY 145
Query: 327 ALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
E ++ +F M R + + PD V ++L+ C H + G+A M
Sbjct: 146 CQARNYEEALLLFHSMKRSR---VVPDQVIIATVLSTCAHTRNLRFGKAIHSYM 196
>gi|15229345|ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04750, mitochondrial; Flags: Precursor
gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical protein [Arabidopsis thaliana]
gi|332640610|gb|AEE74131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 661
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 290/519 (55%), Gaps = 17/519 (3%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLG-QSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
Q L +++ + ++ +KQ+ + G S N+ LV+F ++L N A +F +
Sbjct: 134 QTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKF-YMELGNFGVAEKVFARM 192
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
P+ + MI YA Q + A LY MV G +P+++ +L C + + R
Sbjct: 193 PHPDVSSFNVMIVGYAKQ-GFSLEALKLYFKMVSDG-IEPDEYTVLSLLVCCGHLSDIRL 250
Query: 133 TKMVHTQIVKSG--FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
K VH I + G + ++ AL++ Y + + G+A++ FD M +++ SW M+ G
Sbjct: 251 GKGVHGWIERRGPVYSSNLILSNALLDMYFKC-KESGLAKRAFDAMKKKDMRSWNTMVVG 309
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS--FFRRMGMEVSDNIRP 248
+ R+GD++ A ++FD MP RD+ +WNS++ G ++ G + F+ M + + ++P
Sbjct: 310 FVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYE---MTIVEKVKP 366
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
++VT+V +S + G L G+ +HG V R L D+F+S+ALIDMY KCG ++ A F
Sbjct: 367 DRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVF 426
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
++K + W SMI A HG + ++ +F M Q+ + P+ VT +++L AC+H G
Sbjct: 427 KTATEKDVALWTSMITGLAFHGNGQQALQLFGRM---QEEGVTPNNVTLLAVLTACSHSG 483
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV-KGMKIEPDEVVWGS 427
LVE+G F M + +P+ EHYG LVDLL RAGR EEA ++V K M + P + +WGS
Sbjct: 484 LVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGS 543
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
+L+ C+ + AE A+ +L++++P G ++L+NIY +G+W K R+ +++R
Sbjct: 544 ILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGV 603
Query: 488 YKTPGCSWIEVDKQVHQFHSLDK-THPRTEEIYDALESM 525
KT G S + + +H+F + +K HPR EI L+ +
Sbjct: 604 KKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHL 642
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 206/482 (42%), Gaps = 83/482 (17%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL-SNLTYARFIFD 70
LN Q L +LE CN N KQ+ + + F +L+ F + NL A+ +F
Sbjct: 33 LNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFL 92
Query: 71 HLT-TPNTYLYTAMITAYASQPAHASSAFSLYRDMVR-RGQPQPNQFIYPHVLKSCPDVL 128
+ T PN ++Y MI+A +S + F LY M+R R P F+Y ++K+ +
Sbjct: 93 NFTPNPNVFVYNTMISAVSSS---KNECFGLYSSMIRHRVSPDRQTFLY--LMKASSFLS 147
Query: 129 ESRGTKMVHTQIVKSG-FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
E K +H I+ SG + +LV Y GN G+A K+F M +V S+ M
Sbjct: 148 E---VKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGN-FGVAEKVFARMPHPDVSSFNVM 203
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I GY + G A L+ M VSD I
Sbjct: 204 IVGYAKQGFSLEALKLYFKM----------------------------------VSDGIE 229
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS--FISNALIDMYGKCGSLKEAR 305
P++ T++ L GH ++LGK +HG++ R G S +SNAL+DMY KC A+
Sbjct: 230 PDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAK 289
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR-----------------CQDH 348
RAFD KK + SWN+M+ F G E + VF++M + C
Sbjct: 290 RAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQR 349
Query: 349 NIR-------------PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+R PD VT +SL++ + G + GR L+ + +++
Sbjct: 350 TVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIR-LQLKGDAFLSSA 408
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDP 453
L+D+ + G E A V K E D +W S++ G +G A ++ E + P
Sbjct: 409 LIDMYCKCGIIERAFMVFK-TATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTP 467
Query: 454 NN 455
NN
Sbjct: 468 NN 469
>gi|345505218|gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
Length = 617
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 171/494 (34%), Positives = 266/494 (53%), Gaps = 25/494 (5%)
Query: 19 ILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L+ C+ + +K Q+ FL G F L+ LK L +AR IFD +
Sbjct: 131 VLKACSRLGLVKEGMQIHGFLKKTGLWSDLFLQNCLIGL-YLKCGWLGFARQIFDRMPQR 189
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
++ Y +MI Y + SA L+ M P + L S ++
Sbjct: 190 DSVSYNSMIDGYV-KCGSTESARELFDLM-------PEEM---KNLISWNSMISGYAQTS 238
Query: 136 VHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
I F + P + ++++ Y + G I A+ LFD M R+VV+W+ MI GY
Sbjct: 239 DGVDIASKLFSEMPDKDLISWNSMIDGYVKHGR-IEDAKYLFDVMPRRDVVTWSTMIDGY 297
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
++G + A +LFD MP RDV ++NS+IAG QN +A+ F ME ++ P++
Sbjct: 298 AKLGFVHQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEALEIFS--DMEKESHLSPDET 355
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
TLV LSAI G L +H Y+ L + ALIDMY KCGS++ A F
Sbjct: 356 TLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFKGI 415
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K + WN+MI A+HG E++ F+ +++ + +I+PD +TF+ LLNAC+H GLV+
Sbjct: 416 ENKSIDHWNAMIGGLAIHGLGESA---FDMLLQIERRSIKPDDITFVGLLNACSHSGLVK 472
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G F+LM + ++IEP+++HYGC+VD+L R+G E A +++ M IEP++V+W + L
Sbjct: 473 EGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLAA 532
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C + + E K LI N ++L+N+Y GKW +VR++R ++K+R K P
Sbjct: 533 CNHHKEFETGELVAKHLIWEAGYNPSSYVLLSNLYASFGKWKDVRRIRTIMKERKIEKVP 592
Query: 492 GCSWIEVDKQVHQF 505
GCSWIE+D +VH+F
Sbjct: 593 GCSWIELDGRVHEF 606
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 154/359 (42%), Gaps = 50/359 (13%)
Query: 111 QPNQFIYPHV--LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSY--SRSGNDI 166
QP I P + L SC + S +H ++V +GF + P + T +V ++ SR +
Sbjct: 9 QPWSSISPTIKLLGSCKN---SEDVNKIHARLVTNGFIKNPNLTTRIVLAFAASRRPYXV 65
Query: 167 GIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNG 226
AR +F E R S GD + D WN+VI +
Sbjct: 66 EFARFVFHEYXIR---------SFSPGGGDXE------------DXYLWNAVIKSHSHGT 104
Query: 227 LFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSF 286
A+ F M + + + ++ +L L A G+++ G IHG++ + GL D F
Sbjct: 105 DPRRALLLFCLM---LENGVSVDKFSLSLVLKACSRLGLVKEGMQIHGFLKKTGLWSDLF 161
Query: 287 ISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQ 346
+ N LI +Y KCG L AR+ FDR ++ S+NSMI+ + G +E++ +F+ M
Sbjct: 162 LQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSTESARELFDLM---- 217
Query: 347 DHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE--HYGCLVDLLGRAG 404
P+ + + N+ G Q + +K + P + + ++D + G
Sbjct: 218 -----PEEMKNLISWNSMISG--YAQTSDGVDIASKLFSEMPDKDLISWNSMIDGYVKHG 270
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG-----RTDFAEFAVKKLIEIDPNNGGY 458
R E+A + M D V W ++++G G +T F + + ++ + GY
Sbjct: 271 RIEDAKYLFDVMP-RRDVVTWSTMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMIAGY 328
>gi|354805230|gb|AER41645.1| CRR4 [Oryza punctata]
Length = 632
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 261/467 (55%), Gaps = 24/467 (5%)
Query: 66 RFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
R +FD + + + +++ Y S A+ A L+ M P+ N + V+
Sbjct: 170 RQVFDEMVDKDVVSWNSIVGVYMSS-GDATGAMGLFEAM-----PERNVVSWNTVVAGF- 222
Query: 126 DVLESRGTKMVHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+R MV + V F++ P V +++ Y+ SG D+ AR +FD M ++V
Sbjct: 223 ----ARTGDMVTARTV---FDRMPSRNAVSWNLMISGYATSG-DVEAARSVFDRMDQKDV 274
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
VSWTAM+S Y ++GD+ A LFD MP +++ +WN++I G N + +A+ F+ M +E
Sbjct: 275 VSWTAMVSAYAKIGDLDTAKELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLE 334
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
RP++ TLV +SA G ++ I ++ ++ L + NALIDM+ KCG +
Sbjct: 335 --GRFRPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNTHLTVALGNALIDMFAKCGDV 392
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
A+ F + + + +W +MI+ FA +G ++ V+ M R + DG FI+ L
Sbjct: 393 GRAQSIFYKMETRCIITWTTMISGFAFNGLCREALLVYNNMCR---EGVELDGTVFIAAL 449
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
ACTHGGL+++G + F M + Y I+P++EHYGC+VDLLGRAG +EA+ ++ M +EP
Sbjct: 450 AACTHGGLLQEGWSIFNEMVEQYNIQPRMEHYGCVVDLLGRAGNLQEAILFIESMPLEPS 509
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
V+W +LL+ C +G + E+ KK+ E++P N Y ++++N G+WD V R
Sbjct: 510 VVIWVTLLSSCVAHGNAELIEYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIGARTS 569
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
+++ K PG S I+V +VH+F + D H R +EIY+ ++ ++AL
Sbjct: 570 MRNWGIEKVPGSSLIQVGSEVHEFLAKDTRHERRKEIYETVDGLMAL 616
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 163/341 (47%), Gaps = 22/341 (6%)
Query: 101 YRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYS 160
Y M +G P PN F + +L++C + R VH QIV+ GF V+ AL++ Y
Sbjct: 98 YVAMRAQGVP-PNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYY 156
Query: 161 R----SGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWN 216
R +G AR++FDEM D++VVSW +++ Y GD A LF++MP+R+V +WN
Sbjct: 157 RCGGGGAGGVGAARQVFDEMVDKDVVSWNSIVGVYMSSGDATGAMGLFEAMPERNVVSWN 216
Query: 217 SVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV 276
+V+AG + G A + F RM N V+ +S +G ++ + +
Sbjct: 217 TVVAGFARTGDMVTARTVFDRMPSR-------NAVSWNLMISGYATSGDVEAARSVF--- 266
Query: 277 YRNGLDLDSFIS-NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
+ +D +S A++ Y K G L A+ FD K L SWN+MI + + + + +
Sbjct: 267 --DRMDQKDVVSWTAMVSAYAKIGDLDTAKELFDHMPVKNLVSWNAMITGYNHNSRYDEA 324
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ F+ MM + RPD T +S+++AC G VE + K+ +
Sbjct: 325 LRTFQLMM--LEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIGKS-NTHLTVALGNA 381
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
L+D+ + G A + M+ + W ++++G G
Sbjct: 382 LIDMFAKCGDVGRAQSIFYKMETRCI-ITWTTMISGFAFNG 421
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 169/493 (34%), Positives = 256/493 (51%), Gaps = 74/493 (15%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + +TAM++ Y Q A +L+ +M +R
Sbjct: 162 ARKLFDEMPAKDVVAWTAMLSGYC-QVGRVDEARTLFDEMPKRNV--------------- 205
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
V TA+V+ Y+++G + +ARKLF+ M +RN VSW
Sbjct: 206 -------------------------VSWTAMVSGYAQNGQ-VNLARKLFEVMPERNEVSW 239
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG----- 239
TAM+ GY + G I++A LF++MPD + A N +I G Q G+ A S F RM
Sbjct: 240 TAMLFGYIQAGRIEDAEELFNAMPDHPLAACNGMIVGFGQQGMVDAAKSVFDRMCERDDG 299
Query: 240 ---------------MEVSDN--------IRPNQVTLVCALSAIGHTGMLQLGKVIHGYV 276
ME IRPN +++ L+ +L G+ +HG +
Sbjct: 300 TWSAIIKAYEQNEFLMEALSTFREMLHIGIRPNYPSVISILTVCAALAVLDYGREVHGAM 359
Query: 277 YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSI 336
R D+D + +ALI MY KCG+L +A+R F K + WNSMI +A HG E ++
Sbjct: 360 LRRSFDMDIYAVSALITMYIKCGNLDKAKRVFHMFEPKDVVMWNSMITGYAQHGLGEEAL 419
Query: 337 CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCL 396
+F++M + PDG+T+I L AC++ G V++GR F M I+P +EHY C+
Sbjct: 420 HIFDDMRLA---GMVPDGITYIGALTACSYTGKVKEGRDIFNSMRTKSGIKPGLEHYACM 476
Query: 397 VDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNG 456
VDLLGRAG +EAL ++K M +EPD V+WG+L+ C+++ + AE + KKL+E++P N
Sbjct: 477 VDLLGRAGLVDEALYLIKTMPVEPDAVIWGALMGACRMHKNAEIAEISAKKLLELEPGNA 536
Query: 457 GYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDK-THPRT 515
G ++L++IY G+W++ +RK + R+ K+ GCSWIE DK+VH F S D H
Sbjct: 537 GPYVLLSHIYTSSGRWEDASNMRKFISSRHLNKSLGCSWIEYDKRVHLFKSGDVLAHQEH 596
Query: 516 EEIYDALESMVAL 528
I LE + L
Sbjct: 597 ASILKMLEKLDGL 609
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 195/461 (42%), Gaps = 46/461 (9%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+ N+ AR F+ + T Y A++ Y +A ++ M R N I
Sbjct: 29 RTGNMEGARATFEAMPLRTTASYNALLAGYFRNHL-PDAALRVFHRMPTRDLASYNALIS 87
Query: 118 PHVLK--SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
L+ + PD + T +V T+L+ Y R G + A +LF +
Sbjct: 88 GLSLRRHTLPDAAAALATIPYPPSVVSF---------TSLLRGYVRHGL-LADAIQLFRQ 137
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
M +RN +S+T ++ G+ G + A LFD MP +DV AW ++++G Q G +A + F
Sbjct: 138 MPERNHISYTVLLGGFLDAGRVDEARKLFDEMPAKDVVAWTAMLSGYCQVGRVDEARTLF 197
Query: 236 RRMGME--------VSDNIRPNQVTLVCAL-------SAIGHTGML----QLGKVIHGYV 276
M VS + QV L L + + T ML Q G++
Sbjct: 198 DEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVMPERNEVSWTAMLFGYIQAGRIEDAEE 257
Query: 277 YRNGL-DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
N + D N +I +G+ G + A+ FDR ++ +W+++I ++ + +
Sbjct: 258 LFNAMPDHPLAACNGMIVGFGQQGMVDAAKSVFDRMCERDDGTWSAIIKAYEQNEFLMEA 317
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ F EM+ IRP+ + IS+L C +++ GR M + + I
Sbjct: 318 LSTFREMLHI---GIRPNYPSVISILTVCAALAVLDYGREVHGAMLRR-SFDMDIYAVSA 373
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVV-WGSLLNGCKIYGRTDFAE--FAVKKLIEID 452
L+ + + G ++A V EP +VV W S++ G +G + A F +L +
Sbjct: 374 LITMYIKCGNLDKAKRVFH--MFEPKDVVMWNSMITGYAQHGLGEEALHIFDDMRLAGMV 431
Query: 453 PNNGGY-GIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
P+ Y G + A Y GK E R + ++ ++ K PG
Sbjct: 432 PDGITYIGALTACSY--TGKVKEGRDIFNSMRTKSGIK-PG 469
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 131/295 (44%), Gaps = 37/295 (12%)
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM-- 238
VV A I+ R G+++ A + F++MP R ++N+++AG +N L A+ F RM
Sbjct: 17 VVDANARIARLARTGNMEGARATFEAMPLRTTASYNALLAGYFRNHLPDAALRVFHRMPT 76
Query: 239 -----------GMEVSDNIRPNQVTLVCAL----SAIGHTGMLQLGKVIHGY------VY 277
G+ + + P+ + + S + T +L+ G V HG ++
Sbjct: 77 RDLASYNALISGLSLRRHTLPDAAAALATIPYPPSVVSFTSLLR-GYVRHGLLADAIQLF 135
Query: 278 RNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSIC 337
R + + L+ + G + EAR+ FD K + +W +M++ + G+ + +
Sbjct: 136 RQMPERNHISYTVLLGGFLDAGRVDEARKLFDEMPAKDVVAWTAMLSGYCQVGRVDEART 195
Query: 338 VFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLV 397
+F+EM + N+ V++ ++++ G V R F++M + + +G +
Sbjct: 196 LFDEMPK---RNV----VSWTAMVSGYAQNGQVNLARKLFEVMPERNEVSWTAMLFGYI- 247
Query: 398 DLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
+AGR E+A E+ M P G ++ G G D A+ ++ E D
Sbjct: 248 ----QAGRIEDAEELFNAMPDHPLAACNG-MIVGFGQQGMVDAAKSVFDRMCERD 297
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/453 (36%), Positives = 261/453 (57%), Gaps = 17/453 (3%)
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ ++ A+I YA + A ++ S Y GQ Q + P + + K+
Sbjct: 59 DAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKV 118
Query: 136 VHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEM--SDRNVVSWTAMIS 189
+ + F+ P V A+++ Y+++G A +LFDEM + RN V+W AMIS
Sbjct: 119 KDLEAARRYFDCMPERSVVSWNAMLSGYAQNGL-AEEALRLFDEMLGAYRNSVTWNAMIS 177
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
Y RVGD+ +A LF++MP R+V WNS+IAG QNG + AI F+ M + + P+
Sbjct: 178 AYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEM--ITAKKLTPD 235
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+VT+V +SA GH G L+LG + ++ N + L NA+I MY +CGS+++A+R F
Sbjct: 236 EVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQ 295
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
+ + + S+N++I+ FA HG +I + M ++ I PD VTFI +L AC+H GL
Sbjct: 296 EMATRDVVSYNTLISGFAAHGHGVEAINLMSTM---KEGGIEPDRVTFIGVLTACSHAGL 352
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
+E+GR F+ + +P I+HY C+VDLLGR G E+A ++ M +EP V+GSLL
Sbjct: 353 LEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLL 407
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
N +I+ + + E A KL E++P+N G I+L+NIY G+W +V ++R+ +K K
Sbjct: 408 NASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKK 467
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
T G SW+E ++H+F D++H R+++IY L
Sbjct: 468 TTGWSWVEYGGKLHKFIVADRSHERSDDIYQLL 500
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 121/292 (41%), Gaps = 67/292 (22%)
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM----------- 294
+RP+ + + G G+ H +V + G D+F+ NA+IDM
Sbjct: 26 VRPDAFVYPILIKSAGTGGI-----GFHAHVLKLGHGSDAFVRNAVIDMYARKVADWNAM 80
Query: 295 ----------------------------------YGKCGSLKEARRAFDRNSKKRLTSWN 320
Y K L+ ARR FD ++ + SWN
Sbjct: 81 VSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWN 140
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
+M++ +A +G +E ++ +F+EM+ + VT+ ++++A G ++ R F M
Sbjct: 141 AMLSGYAQNGLAEEALRLFDEML-----GAYRNSVTWNAMISAYMRVGDLDSARKLFNTM 195
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM----KIEPDEVVWGSLLNGCKIYG 436
+ + ++ + G+ A+E+ K M K+ PDEV S+++ C G
Sbjct: 196 PGR-----NVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLG 250
Query: 437 RTDFAEFAVKKLIE--IDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+ + V+ L E I + G+ M+ +Y G ++ ++V + + R+
Sbjct: 251 ALELGNWVVRFLTENQIKLSISGHNAMIF-MYSRCGSMEDAKRVFQEMATRD 301
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 168/523 (32%), Positives = 280/523 (53%), Gaps = 43/523 (8%)
Query: 6 NQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL--SNLT 63
++++ Q + ++ +CN + L Q+Q++ +F A KL+ FCT S+++
Sbjct: 22 SKIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVA-KLINFCTESPTESSMS 80
Query: 64 YARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
YAR +F+ ++ P+ ++ +M Y S+ + FSL+ +++ G P+ + +P +LK+
Sbjct: 81 YARHLFEAMSEPDIVIFNSMARGY-SRFTNPLEVFSLFVEILEDGI-LPDNYTFPSLLKA 138
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
C + +H +K G D NV
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGL--------------------------------DDNVYV 166
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
+I+ YT D+ +A +FD + + V +N++I G + ++A+S FR M
Sbjct: 167 CPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ---G 223
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
++PN++TL+ LS+ G L LGK IH Y ++ ++ ALIDM+ KCGSL +
Sbjct: 224 KYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDD 283
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A F++ K +W++MI ++A HG++E S+ +FE M + N++PD +TF+ LLNA
Sbjct: 284 AVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERM---RSENVQPDEITFLGLLNA 340
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C+H G VE+GR YF M + I P I+HYG +VDLL AG E+A E + + I P +
Sbjct: 341 CSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTPM 400
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+W LL C + D AE +++ E+D ++GG ++L+N+Y KW+ V +RK++K
Sbjct: 401 LWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMK 460
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
DR A K PGCS IEV+ VH+F S D T +++ AL+ MV
Sbjct: 461 DRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMV 503
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 177/513 (34%), Positives = 264/513 (51%), Gaps = 58/513 (11%)
Query: 65 ARFIFDHLTTP-NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPH---- 119
AR +FD N +TA+++ YA + A +L+ M R N + +
Sbjct: 85 ARALFDRPDARRNVVTWTALLSGYA-RAGRVDEAEALFGRMPERNVVSWNTMLEAYTSSG 143
Query: 120 -VLKSCP-----DVLESRGTKMVHTQIVKSG--------FEQYP----VVETALVNSYSR 161
V +C V ++ ++ +V+SG F++ P + T +V +R
Sbjct: 144 RVGDACTLFNGMPVRDAGSWNILLAALVRSGNIDKARKLFDRMPERNVMAWTTMVAGIAR 203
Query: 162 SGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAG 221
SG+ + AR LFD M +RNVVSW AMISGY R I A LF MP RD+ +WN +I G
Sbjct: 204 SGS-VNEARALFDGMPERNVVSWNAMISGYARNHMIDEAHDLFMKMPTRDIASWNIMITG 262
Query: 222 CTQNGLFSDAISFFRRM-----------------------------GMEVSDNIRPNQVT 252
QN A F +M GM + D IRPNQVT
Sbjct: 263 FIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNGMLI-DGIRPNQVT 321
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
+ A+ A + L G+ +H + + D+FI + L+++Y KCG + AR+ F+ +
Sbjct: 322 FLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSK 381
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+K + SWN MI ++A HG +I ++E+M Q++ +P+ VT++ LL+AC+H GLV++
Sbjct: 382 EKDVISWNGMIAAYAHHGVGLEAIHLYEKM---QENGYKPNDVTYVGLLSACSHSGLVDE 438
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G F+ M K I + EHY CL+DL RAGR +A ++ +K+EP VW +LL GC
Sbjct: 439 GLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGC 498
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+G + A + L+E +PNN G +L NIY GKW E K+R + DR K PG
Sbjct: 499 NSHGNESIGDLAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPG 558
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
CSWIEV +VH F S DK+H ++ I L+ +
Sbjct: 559 CSWIEVANKVHVFVSRDKSHSESDLINSLLQDI 591
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 184/404 (45%), Gaps = 72/404 (17%)
Query: 145 FEQYP----VVETALVNSYSRSGNDIGIARKLFDEM-SDRNVVSWTAMISGYTRVGDIKN 199
F++ P V TALV +Y+ G + AR LFD + RNVV+WTA++SGY R G +
Sbjct: 58 FDRTPDRDVVSWTALVAAYACQGM-LHDARALFDRPDARRNVVTWTALLSGYARAGRVDE 116
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD----NI--------- 246
A +LF MP+R+V +WN+++ T +G DA + F GM V D NI
Sbjct: 117 AEALFGRMPERNVVSWNTMLEAYTSSGRVGDACTLFN--GMPVRDAGSWNILLAALVRSG 174
Query: 247 -------------RPNQVTLVCALSAIGHTGMLQLGKVI-HGYVYRNGLDLDSFIS---- 288
N + ++ I +G + + + G RN + ++ IS
Sbjct: 175 NIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALFDGMPERNVVSWNAMISGYAR 234
Query: 289 ----------------------NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSF 326
N +I + + +L+ A+ FD+ ++ + +W +M+N +
Sbjct: 235 NHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKNLERAQELFDKMPRRNVVTWTTMMNGY 294
Query: 327 ALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT-YR 385
QSE ++ +F M+ IRP+ VTF+ ++AC++ + +G+ +++ KT ++
Sbjct: 295 LQSIQSETALQLFNGMLI---DGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQ 351
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
+ IE L++L + G A +V K E D + W ++ +G A
Sbjct: 352 FDTFIE--STLMNLYAKCGEIILARKVFNLSK-EKDVISWNGMIAAYAHHGVGLEAIHLY 408
Query: 446 KKLIE--IDPNNGGYGIMLANIYGELGKWDE-VRKVRKMLKDRN 486
+K+ E PN+ Y + L + G DE +R M+KDR+
Sbjct: 409 EKMQENGYKPNDVTY-VGLLSACSHSGLVDEGLRIFEYMVKDRS 451
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 96/238 (40%), Gaps = 54/238 (22%)
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
G + +A LFD PDRDV +W +++A G+ DA + F R + R N VT
Sbjct: 48 AGRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDR------PDARRNVVTW 101
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
AL+ Y + G + EA F R +
Sbjct: 102 T-----------------------------------ALLSGYARAGRVDEAEALFGRMPE 126
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ + SWN+M+ ++ G+ ++ +F M +R G I LL A G +++
Sbjct: 127 RNVVSWNTMLEAYTSSGRVGDACTLFNGM------PVRDAGSWNI-LLAALVRSGNIDKA 179
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
R F M E + + +V + R+G EA + GM E + V W ++++G
Sbjct: 180 RKLFDRMP-----ERNVMAWTTMVAGIARSGSVNEARALFDGMP-ERNVVSWNAMISG 231
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/502 (32%), Positives = 272/502 (54%), Gaps = 44/502 (8%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL-SNLTYARFIFDHLTTPNTYLYTAMI 84
+NH+ +L + L G +L+ C ++L+YAR IFD + P+T+ + +I
Sbjct: 1 MNHIYKLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTII 60
Query: 85 TAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG 144
A+A S + M P+ F +P VLK+C + G + H+ + K G
Sbjct: 61 RAHADSSPSFSLSLFSKMAM---AGVSPDHFTFPFVLKACARL--QTGLDL-HSLLFKLG 114
Query: 145 FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLF 204
F D +V +I Y G + A +F
Sbjct: 115 F--------------------------------DSDVYVQNGLIHFYGCCGFLDFALKVF 142
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
+ MP+RD+ +W+S+IA +NG +A++ F+RM ++ ++P++V ++ +SAI G
Sbjct: 143 EEMPERDLVSWSSMIACFAKNGFGYEALALFQRM--QLVGTVKPDEVIVLSVVSAISILG 200
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
L+LGK I G++ RNGL+ + AL+DM+ +CG ++E+ R FD ++ + +W ++IN
Sbjct: 201 DLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALIN 260
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
A+HG+S ++ +F EM ++H +PD VTF +L AC+HGGLV +G F+ + Y
Sbjct: 261 GLAVHGRSAEALRMFYEM---RNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEY 317
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
+EP EHYGC+VDLLGRAG EA + V GM I P+ ++W +LL C + + AE
Sbjct: 318 GMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKV 377
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
+K+ E+D + G ++L+N+YG +G+W E VR ++++ K PGCS I V+ +H+
Sbjct: 378 KEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHE 437
Query: 505 FHSLDKTHPRTEEIYDALESMV 526
F + D HP+ E I + L SM+
Sbjct: 438 FVAGDNNHPQFESIREFLVSMI 459
>gi|15228117|ref|NP_181268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216848|sp|Q9ZUT5.1|PP191_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37310
gi|4056485|gb|AAC98051.1| hypothetical protein [Arabidopsis thaliana]
gi|110741249|dbj|BAF02175.1| hypothetical protein [Arabidopsis thaliana]
gi|330254288|gb|AEC09382.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 279/514 (54%), Gaps = 12/514 (2%)
Query: 16 VLAILERCNHI---NHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
VL L C+ + +Q+ F+ G F ++ + T K N+ AR +FD +
Sbjct: 135 VLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYT-KCDNIESARKVFDEM 193
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
+ + + +MI+ Y SQ +Y+ M+ +PN V ++C +
Sbjct: 194 SERDVVSWNSMISGY-SQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIF 252
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
VH +++++ + + A++ Y++ G+ + AR LFDEMS+++ V++ A+ISGY
Sbjct: 253 GLEVHKKMIENHIQMDLSLCNAVIGFYAKCGS-LDYARALFDEMSEKDSVTYGAIISGYM 311
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
G +K A +LF M + WN++I+G QN + I+ FR M + RPN VT
Sbjct: 312 AHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREM---IRCGSRPNTVT 368
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
L L ++ ++ L+ GK IH + RNG D + +++ ++ID Y K G L A+R FD
Sbjct: 369 LSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK 428
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+ L +W ++I ++A+HG S+++ +F++M Q +PD VT ++L+A H G +
Sbjct: 429 DRSLIAWTAIITAYAVHGDSDSACSLFDQM---QCLGTKPDDVTLTAVLSAFAHSGDSDM 485
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
+ F M Y IEP +EHY C+V +L RAG+ +A+E + M I+P VWG+LLNG
Sbjct: 486 AQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGA 545
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+ G + A FA +L E++P N G ++AN+Y + G+W+E VR +K K PG
Sbjct: 546 SVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPG 605
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
SWIE +K + F + D + R++E+Y+ +E +V
Sbjct: 606 TSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLV 639
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 192/459 (41%), Gaps = 92/459 (20%)
Query: 28 HLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAY 87
H+ QL + + NF A KL+ F T + A +FD +T N + Y A++ AY
Sbjct: 40 HVLQLHARIVVFSIKPDNFLASKLISFYT-RQDRFRQALHVFDEITVRNAFSYNALLIAY 98
Query: 88 ASQPAHASSAFSLYRDMV-----RRGQPQPNQFIYPHVLKS---CPDVLESRGTKMVHTQ 139
S+ + AFSL+ + +P+ VLK+ C D + VH
Sbjct: 99 TSREMYF-DAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGF 157
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
+++ GF+ V ++ Y++ N I ARK+FDEMS+R+VVSW +MISGY++ G ++
Sbjct: 158 VIRGGFDSDVFVGNGMITYYTKCDN-IESARKVFDEMSERDVVSWNSMISGYSQSGSFED 216
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
++ +M C+ + +PN VT++ A
Sbjct: 217 CKKMYKAM------------LACS---------------------DFKPNGVTVISVFQA 243
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR---- 315
G + L G +H + N + +D + NA+I Y KCGSL AR FD S+K
Sbjct: 244 CGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTY 303
Query: 316 ---------------------------LTSWNSMINSFALHGQSENSICVFEEMMRCQDH 348
L++WN+MI+ + E I F EM+RC
Sbjct: 304 GAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGS- 362
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT------YRIEPQIEHYGCLVDLLGR 402
RP+ VT SLL + T+ ++ G+ + Y I++Y L LLG
Sbjct: 363 --RPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGA 420
Query: 403 AGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
F+ + + W +++ ++G +D A
Sbjct: 421 QRVFDNCK--------DRSLIAWTAIITAYAVHGDSDSA 451
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/469 (34%), Positives = 260/469 (55%), Gaps = 40/469 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L AR + D + N +TAMI+ Y SQ H+S A S++ +M+R +PN+F +
Sbjct: 98 KCDCLEDARKVLDEMPEKNVVSWTAMISRY-SQTGHSSEALSVFAEMMR-SDGKPNEFTF 155
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
VL SC K +H IVK ++ + V ++L++ Y+++
Sbjct: 156 ATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKA--------------- 200
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
G I+ A +F+ +P+RDV + ++IAG Q GL +A+ F+R
Sbjct: 201 -----------------GQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQR 243
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
+ S+ +RPN VT L+A+ +L GK H +V R L + + N+LIDMY K
Sbjct: 244 LQ---SEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSK 300
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG+L A+R FD ++ SWN+M+ ++ HG + +F +MR + ++PD VT
Sbjct: 301 CGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR-LMR-DEKRVKPDAVTL 358
Query: 358 ISLLNACTHGGLVEQGRA-YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+++L+ C+HG + + G + Y ++ Y I+P EHYGC+VD+LGRAGR +EA E +K M
Sbjct: 359 LAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRM 418
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
+P V GSLL C+++ D E+ +LIEI+P N G ++L+N+Y G+W++V
Sbjct: 419 PSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVN 478
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
VR M+ + K PG SWI+ ++ +H FH+ D+THPR EE+ ++ +
Sbjct: 479 NVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEI 527
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 157/335 (46%), Gaps = 43/335 (12%)
Query: 103 DMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRS 162
+MV G P+ Y +L +C D R + VH ++K+ + L +Y R
Sbjct: 41 EMVMLG-PEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRY---------LPATYLR- 89
Query: 163 GNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC 222
T ++ Y + +++A + D MP+++V +W ++I+
Sbjct: 90 ----------------------TRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRY 127
Query: 223 TQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLD 282
+Q G S+A+S F M + + +PN+ T L++ L LGK IHG + + D
Sbjct: 128 SQTGHSSEALSVFAEM---MRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYD 184
Query: 283 LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM 342
F+ ++L+DMY K G ++EAR F+ ++ + S ++I +A G E ++ +F+
Sbjct: 185 SHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQ-- 242
Query: 343 MRCQDHNIRPDGVTFISLLNACTHGGLVEQGR-AYFKLMTKTYRIEPQIEHYGCLVDLLG 401
R Q +RP+ VT+ SLL A + L++ G+ A+ ++ + +++ L+D+
Sbjct: 243 -RLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYS 299
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
+ G A + M E + W ++L G +G
Sbjct: 300 KCGNLSYAQRLFDNMP-ERTAISWNAMLVGYSKHG 333
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 128/306 (41%), Gaps = 55/306 (17%)
Query: 11 TLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFD 70
L +Q+ ++ + N+ +H+ +G S + YA K + AR IF+
Sbjct: 169 ALGKQIHGLIVKWNYDSHI--------FVGSSLLDMYA---------KAGQIEEAREIFE 211
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
L + TA+I YA Q A +++ + G +PN Y +L + +
Sbjct: 212 CLPERDVVSCTAIIAGYA-QLGLDEEALEMFQRLQSEGM-RPNYVTYASLLTALSGLALL 269
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
K H +++ Y V++ +L++ YS+ GN + A++LFD M +R +SW AM+ G
Sbjct: 270 DHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN-LSYAQRLFDNMPERTAISWNAMLVG 328
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y++ +GL + + FR M E ++P+
Sbjct: 329 YSK-------------------------------HGLGREVLELFRLMRDE--KRVKPDA 355
Query: 251 VTLVCALSAIGHTGMLQLGKVIH-GYVY-RNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
VTL+ LS H M G I+ G V G+ D+ ++DM G+ G + EA
Sbjct: 356 VTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFI 415
Query: 309 DRNSKK 314
R K
Sbjct: 416 KRMPSK 421
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 14/266 (5%)
Query: 204 FDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHT 263
F S P+ + + + C+ NG +A+ +G E+ + L+A
Sbjct: 12 FSSSPNSVLQTFRPISQLCS-NGRLQEALLEMVMLGPEIGFHCYD------ALLNACLDK 64
Query: 264 GMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMI 323
L+ G+ +H ++ + +++ L+ YGKC L++AR+ D +K + SW +MI
Sbjct: 65 RALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMI 124
Query: 324 NSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT 383
+ ++ G S ++ VF EMMR +P+ TF ++L +C + G+ L+ K
Sbjct: 125 SRYSQTGHSSEALSVFAEMMRSDG---KPNEFTFATVLTSCIRASGLALGKQIHGLIVK- 180
Query: 384 YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEF 443
+ + I L+D+ +AG+ EEA E+ + + E D V +++ G G + A
Sbjct: 181 WNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLP-ERDVVSCTAIIAGYAQLGLDEEALE 239
Query: 444 AVKKLIE--IDPNNGGYGIMLANIYG 467
++L + PN Y +L + G
Sbjct: 240 MFQRLQSEGMRPNYVTYASLLTALSG 265
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/535 (32%), Positives = 281/535 (52%), Gaps = 49/535 (9%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
+QL +F G + A L LK + AR +FD + + +++AMI Y S
Sbjct: 124 QQLHAFAAASGFLTDSIVASSLTHM-YLKCDRILDARKLFDRMPDRDVVVWSAMIAGY-S 181
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS----------------------CPD- 126
+ A L+ +M R G +PN + +L PD
Sbjct: 182 RLGLVEEAKELFGEM-RSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDG 240
Query: 127 -----VLESRGT-------KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
VL + G VH ++K G V +A+++ Y + G ++R +FD
Sbjct: 241 STVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSR-VFD 299
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR----DVPAWNSVIAGCTQNGLFSD 230
E+ + + S A ++G +R G + A +F+ D+ +V W S+IA C+QNG +
Sbjct: 300 EVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLE 359
Query: 231 AISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNA 290
A+ FR M + + PN VT+ + A G+ L GK IH + R G+ D ++ +A
Sbjct: 360 ALELFRDMQ---AYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSA 416
Query: 291 LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
LIDMY KCG ++ ARR FD+ S L SWN+++ +A+HG+++ ++ +F M++
Sbjct: 417 LIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQ--- 473
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
+PD VTF +L+AC GL E+G + M++ + IEP++EHY CLV LL R G+ EEA
Sbjct: 474 KPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAY 533
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELG 470
++K M EPD VWG+LL+ C+++ E A +KL ++P N G I+L+NIY G
Sbjct: 534 SIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKG 593
Query: 471 KWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
WDE ++R+++K + K PG SWIEV +VH + D++HP+ ++I + L+ +
Sbjct: 594 LWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKL 648
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 184/358 (51%), Gaps = 24/358 (6%)
Query: 37 TTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQP--AHA 94
T L S +FYA L LS + + HL P + ++++I A+A H
Sbjct: 35 TQLTTSLLSFYAN------ALSLSTPQLSLTLSSHLPHPTLFSFSSLIHAFARSHHFPHV 88
Query: 95 SSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETA 154
+ FS + + P+ F+ P +KSC + + +H SGF +V ++
Sbjct: 89 LTTFSHLHPL----RLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASS 144
Query: 155 LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM----PDR 210
L + Y + + I ARKLFD M DR+VV W+AMI+GY+R+G ++ A LF M +
Sbjct: 145 LTHMYLKC-DRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEP 203
Query: 211 DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK 270
++ +WN ++AG NG + +A+ FR M + P+ T+ C L A+G + +G
Sbjct: 204 NLVSWNGMLAGFGNNGFYDEAVGMFRMM---LVQGFWPDGSTVSCVLPAVGCLEDVVVGA 260
Query: 271 VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG 330
+HGYV + GL D F+ +A++DMYGKCG +KE R FD + + S N+ + + +G
Sbjct: 261 QVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNG 320
Query: 331 QSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
+ ++ VF + +D + + VT+ S++ +C+ G + F+ M + Y +EP
Sbjct: 321 MVDTALEVFNKF---KDQKMELNVVTWTSIIASCSQNGKDLEALELFRDM-QAYGVEP 374
>gi|345505206|gb|AEN99827.1| chlororespiratory reduction 4, partial [Aethionema grandiflorum]
Length = 594
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/495 (35%), Positives = 266/495 (53%), Gaps = 17/495 (3%)
Query: 19 ILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L+ C+ + LK Q+ FL G F L+ LK L +AR +FD +
Sbjct: 107 VLKACSRLEFLKEGMQIHGFLRKTGIWSDLFLQNCLIGL-YLKCGCLGFARQVFDRMPQR 165
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
++ Y +MI Y + SA L+ M R + N + ++ + T
Sbjct: 166 DSVSYNSMIDGYV-KCGLMKSAHKLFDLMPREIK---NLISWNSMISGYAQTADGLNTA- 220
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+++ E+ + +++N + G I A+ LFD M R+VV+W MI GY ++G
Sbjct: 221 --SKLFSEMPEKDLISWNSMINGCVKHGR-IEDAKGLFDVMPRRDVVTWATMIDGYAKLG 277
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
+ +A SLFD M RDV A NS++AG QN +A+ F ME ++ P++ TLV
Sbjct: 278 FVHHAKSLFDQMHQRDVVACNSMMAGYVQNKYHMEALEIFN--DMEKDSHLSPDETTLVI 335
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
LSAI G L +H Y+ L + ALIDM+ KCGS++ A F+ K
Sbjct: 336 VLSAIAQLGRLSKAMSMHVYIVEKRFPLGGKLGVALIDMHSKCGSIQHAISVFEGIENKS 395
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
+ WN+MI A+HG E F+ +M+ + +I+PD +TFI +LNAC+H GLV++G
Sbjct: 396 IDHWNAMIGGLAIHGLGE---LAFDMLMQIERCSIQPDXITFIGVLNACSHSGLVKEGLL 452
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
F+LM + + IEP+++HYGCLVD+L R+G E A +++ M +EP++V+W S L+ C +
Sbjct: 453 CFELMRRKHXIEPRLQHYGCLVDVLSRSGSIELAKHLIEDMPMEPNDVIWRSFLSACSTH 512
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
+ E K LI N ++L+N+Y LG W +VR+VR M+K R +K PGCSW
Sbjct: 513 EEFETGELVAKHLILQAGYNPSSYVLLSNMYASLGMWKDVRRVRMMMKQRKLHKIPGCSW 572
Query: 496 IEVDKQVHQFHSLDK 510
IE+D VH+F DK
Sbjct: 573 IELDGNVHEFFVQDK 587
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 129/325 (39%), Gaps = 61/325 (18%)
Query: 204 FDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHT 263
F + D WN+VI + A+ F M + + + ++ +L L A
Sbjct: 58 FSAGEGEDPYLWNAVIKSYSHGIDPRRALLLFCLM---IENGVCVDKFSLSLVLKACSRL 114
Query: 264 GMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMI 323
L+ G IHG++ + G+ D F+ N LI +Y KCG L AR+ FDR ++ S+NSMI
Sbjct: 115 EFLKEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMI 174
Query: 324 NSFALHGQSENSICVFEEMMRCQDHNI---------------------------RPDGVT 356
+ + G +++ +F+ M R + I D ++
Sbjct: 175 DGYVKCGLMKSAHKLFDLMPREIKNLISWNSMISGYAQTADGLNTASKLFSEMPEKDLIS 234
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKT-----------YRIEPQIEHYGCLVDLLGR--- 402
+ S++N C G +E + F +M + Y + H L D + +
Sbjct: 235 WNSMINGCVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKSLFDQMHQRDV 294
Query: 403 -------AGRFE-----EALEVVKGMK----IEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
AG + EALE+ M+ + PDE +L+ GR A
Sbjct: 295 VACNSMMAGYVQNKYHMEALEIFNDMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMHV 354
Query: 447 KLIEID-PNNGGYGIMLANIYGELG 470
++E P G G+ L +++ + G
Sbjct: 355 YIVEKRFPLGGKLGVALIDMHSKCG 379
>gi|413934702|gb|AFW69253.1| hypothetical protein ZEAMMB73_589560 [Zea mays]
Length = 664
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 262/467 (56%), Gaps = 19/467 (4%)
Query: 60 SNLTYARFIFDHLTTPNTYLYTAMIT-AYASQPAHASSAFSLY-RDMVRRGQPQPN-QFI 116
+ L YA +F L+ P+ +L A++ A+ +QP F L+ R G P F
Sbjct: 102 APLRYAVAVFSSLSPPDPFLAAALLRFAHLTQPP--LETFRLFSRLRCAHGSDLPFLPFA 159
Query: 117 Y-PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
+ P + ++ GF+++ VE +L+++Y G D+G ARK+FDE
Sbjct: 160 FSPLAKSAAAARSLHAAASAHAVSLLLGGFDKHRFVENSLISAYVACG-DVGAARKVFDE 218
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
M ++V+SWT+++ Y+R+ D+ +A +F P +D+ AW +++ G QN + A+ F
Sbjct: 219 MLVKDVISWTSIVVAYSRIRDMGSAEEVFALCPVKDMVAWTAMVTGYAQNAMPVKALEAF 278
Query: 236 RRM---GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALI 292
+M GM + ++V+L A+SA G ++ + RNGL + + + L+
Sbjct: 279 EQMAVAGMPI------DEVSLTGAISACAQLGAVKRAAWVQEIAERNGLGRNVVVGSGLV 332
Query: 293 DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
DMY KCG + EAR+ F+ K + +++SMI A HG++ + I +F +M+R D + P
Sbjct: 333 DMYAKCGLIDEARKVFEGMHDKNVYTYSSMIVGLASHGRANDVIALFNDMVRRAD--VEP 390
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
+ VTFI +L AC+H G+V++GR YF M Y I P +HY C+VDLL R+G EAL++
Sbjct: 391 NHVTFIGVLTACSHAGMVKEGRYYFAQMKDRYGILPSADHYACMVDLLARSGLVTEALDL 450
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKW 472
VK M +EP VWG+LL C+I+G T+ A+ A + L ++P G ++L+N G+W
Sbjct: 451 VKSMTVEPHGGVWGALLGACRIHGNTEVAKIAAEHLFRLEPEGIGNYVLLSNTLASAGEW 510
Query: 473 DEVRKVRKMLKDRNAYKTPGCSWIE-VDKQVHQFHSLDKTHPRTEEI 518
DEV K+RK+++ R K P SW E D VHQF + D THP EI
Sbjct: 511 DEVSKLRKLMRIRGLKKDPAVSWFEGRDGFVHQFFAGDNTHPSMHEI 557
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/504 (31%), Positives = 272/504 (53%), Gaps = 10/504 (1%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARFIFDHLTTP 75
+A+L+ ++Q+ + L G + + V+ L L YA I D P
Sbjct: 10 IALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKP 69
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP-QPNQFIYPHVLKSCPDVLESRGTK 134
+ +MI A+ P S F YR ++ G +P+ + ++++C +
Sbjct: 70 TLFALNSMIRAHCKSPVPEKS-FDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGL 128
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
VH ++ GF+ P V+T L++ Y+ G + K+F+ + + V TAM++ R
Sbjct: 129 QVHGMTIRRGFDNDPHVQTGLISLYAELGC-LDSCHKVFNSIPCPDFVCRTAMVTACARC 187
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
GD+ A LF+ MP+RD AWN++I+G Q G +A++ F M +E ++ N V ++
Sbjct: 188 GDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE---GVKVNGVAMI 244
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
LSA G L G+ H Y+ RN + + ++ L+D+Y KCG +++A F +K
Sbjct: 245 SVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEK 304
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ +W+S +N A++G E + +F M + + P+ VTF+S+L C+ G V++G+
Sbjct: 305 NVYTWSSALNGLAMNGFGEKCLELFSLM---KQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 361
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
+F M + IEPQ+EHYGCLVDL RAGR E+A+ +++ M ++P VW SLL+ ++
Sbjct: 362 RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRM 421
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
Y + A KK++E++ N G ++L+NIY + WD V VR+ +K + K PGCS
Sbjct: 422 YKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCS 481
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEI 518
+EV+ +VH+F DK+HP+ +I
Sbjct: 482 VMEVNGEVHEFFVGDKSHPKYTQI 505
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/520 (32%), Positives = 290/520 (55%), Gaps = 38/520 (7%)
Query: 9 NQTLNQQVLAILE-RCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARF 67
N N L L+ +CN+ N LKQ+ + + T G S + L++ + NL YA
Sbjct: 144 NHIFNHPTLQTLQQKCNNFNTLKQIHTQIITTGLSFQTYCLSHLIKISSK--FNLPYAFK 201
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASS--AFSLYRDMVRRGQPQPNQFIYPHVLKSC- 124
IF++++ P +LY +I++ +Q AFSLY ++ QPN F +P + K+C
Sbjct: 202 IFNYISNPTIFLYNTLISSLINQTNQNQIHLAFSLYNKILTNKNLQPNSFTFPSLFKACC 261
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPV---VETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+ ++HT ++K F Q P V+ +L+N Y++ G + ++R +FD +++ ++
Sbjct: 262 SNQSWFHYGPLLHTHVLK--FLQPPFDNFVQASLLNFYAKYG-KMCVSRYIFDRINEPDL 318
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
+W +++ Y R + ++ FD D D +++ FR M +
Sbjct: 319 ATWNVILNAYARSSSYHSYSNSFD---DADFSL---------------ESLYLFRDMQV- 359
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
IRPN+VT+V +SA + G + G +H +V RN + ++ F+ A +DMY KCG L
Sbjct: 360 --IGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCL 417
Query: 302 KEARRAFDRNSKKRLTS--WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
A + FD+ + S + +MI FA+HG ++ ++ +M + + PD TF+
Sbjct: 418 NLACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKM---KFKGLVPDSATFVV 474
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
+ AC+H GLVE+G FK M + + +EP++EHYGCL+DLLGRAGR +EA E + M ++
Sbjct: 475 TMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADMPMK 534
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVR 479
P+ V+W SLL +I+G E A+ KLIE++P G ++L+N+Y +G+ ++V++VR
Sbjct: 535 PNAVLWRSLLGAARIHGNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRVNDVKRVR 594
Query: 480 KMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
K++K K PG S +E+ +H+F + D++HP ++EIY
Sbjct: 595 KLMKHHGVNKLPGFSLVEIKGAMHEFLTGDRSHPFSKEIY 634
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/452 (34%), Positives = 249/452 (55%), Gaps = 37/452 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+ + +AR +FD + + + +MI YA + A A ++ +M RR +P++
Sbjct: 163 RCGRVAFARKVFDEIPRRDLVSWNSMIAGYA-KAGCAREAVEVFGEMGRRDGFEPDEMSL 221
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
VL +C ++ + + V +V+ G +NSY IG
Sbjct: 222 VSVLGACGELGDLELGRWVEGFVVERGMT---------LNSY------IG---------- 256
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+A+IS Y + GD+ +A +FD M RDV WN+VI+G QNG+ +AIS F
Sbjct: 257 -------SALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHA 309
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M D + N++TL LSA G L LGK I Y + G D F++ ALIDMY K
Sbjct: 310 MK---EDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAK 366
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CGSL A+R F +K SWN+MI++ A HG+++ ++ +F+ M + RP+ +TF
Sbjct: 367 CGSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQ-CMSDEGGGARPNDITF 425
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+ LL+AC H GLV +G F +M+ + + P+IEHY C+VDLL RAG EA ++++ M
Sbjct: 426 VGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMP 485
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+PD+V G+LL C+ D E ++ ++E+DP+N G I+ + IY L W++ +
Sbjct: 486 EKPDKVTLGALLGACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSAR 545
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLD 509
+R +++ + KTPGCSWIEV+ +H+FH+ D
Sbjct: 546 MRLLMRQKGITKTPGCSWIEVENHLHEFHAGD 577
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 177/391 (45%), Gaps = 49/391 (12%)
Query: 56 TLKLSNLTYARFIFDHLTT-PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQ 114
+ L N TYA +F H+ PN Y + MI A + H A +L+ M+ N
Sbjct: 58 AIHLKNFTYASLLFSHIAPHPNDYAFNIMIRALTTTWHHYPLALTLFHRMMSLSLSPNNF 117
Query: 115 FIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
L SC ++ + H+ + K P +L+ YSR
Sbjct: 118 TFPFFFL-SCANLAVLSPARAAHSLVFKLALHSDPHTTHSLITMYSR------------- 163
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
G + A +FD +P RD+ +WNS+IAG + G +A+
Sbjct: 164 -------------------CGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEV 204
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
F MG D P++++LV L A G G L+LG+ + G+V G+ L+S+I +ALI M
Sbjct: 205 FGEMGRR--DGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISM 262
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KCG L ARR FD + + + +WN++I+ +A +G ++ +I +F M ++ + +
Sbjct: 263 YAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAM---KEDCVTENK 319
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEH----YGCLVDLLGRAGRFEEAL 410
+T ++L+AC G ++ G+ Y + +H L+D+ + G A
Sbjct: 320 ITLTAVLSACATIGALDLGK-----QIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQ 374
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
V K M + +E W ++++ +G+ A
Sbjct: 375 RVFKEMP-QKNEASWNAMISALASHGKAKEA 404
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 152/458 (33%), Positives = 266/458 (58%), Gaps = 39/458 (8%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD T + + MI A+ ++ + AF L +M + +P++ ++ +C +
Sbjct: 168 VFDESTVRDVVTWNIMINAHLNK-GLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQL 226
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
K +H SYS+ ++G+ D N+ A+
Sbjct: 227 GNLERGKFLH--------------------SYSK---ELGL---------DENLRVNNAI 254
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
+ Y + DI++A +F+ + ++DV +W S+++G ++G F +A++ F++M + + I
Sbjct: 255 LDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQL---NKIE 311
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
+++TLV LSA TG L GK IH + + ++ D + AL+DMY KCGS+ A +
Sbjct: 312 LDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQV 371
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F R + + +WN++I A+HG E++I +F++M + + PD VTFI+LL AC+H
Sbjct: 372 FRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQM---EHDKLMPDDVTFIALLCACSHA 428
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GLV++G A F+ M ++IEP++EHYGC+VDLL RA + ++AL ++ M I+ + V+W +
Sbjct: 429 GLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWAT 488
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
LL C+ G D AE +++IE++P++ G +ML+N+Y + +WD K+RK +K++
Sbjct: 489 LLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGI 548
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
KTPGCSWIE++ +HQF + D++H +TE+IY +E M
Sbjct: 549 EKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEM 586
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 203/420 (48%), Gaps = 42/420 (10%)
Query: 23 CNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHLTTPNTYLYT 81
C I+ KQ + L ++ KL+ F L S +L YAR +F + P+ ++
Sbjct: 21 CTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICN 80
Query: 82 AMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIV 141
MI YA + + A SLY MV RG P N + YP VL +C + + + H +++
Sbjct: 81 TMIRGYA-RSQNPYEAVSLYYFMVERGVPVDN-YTYPFVLAACARLGAVKLGRRFHCEVL 138
Query: 142 KSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAA 201
K+GF V AL+ Y G+ G A +FDE + R+VV+W MI+ + G + A
Sbjct: 139 KNGFGSDLFVINALIQFYHNCGS-FGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAF 197
Query: 202 SLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIG 261
L D M DN+RP++VT+V + A
Sbjct: 198 DLLDEMTKL---------------------------------DNLRPDEVTMVSLVPACA 224
Query: 262 HTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNS 321
G L+ GK +H Y GLD + ++NA++DMY KC ++ A+ F+R +K + SW S
Sbjct: 225 QLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTS 284
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
M++ A G + ++ +F++M Q + I D +T + +L+AC G ++QG+ Y L+
Sbjct: 285 MLSGLAKSGYFQEALALFQKM---QLNKIELDEITLVGVLSACAQTGALDQGK-YIHLLI 340
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+ I + LVD+ + G + AL+V + M++ + W +L+ G ++G + A
Sbjct: 341 DKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFTWNALIGGLAMHGHGEDA 399
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 168/393 (42%), Gaps = 75/393 (19%)
Query: 133 TKMVHTQIVKSGFEQYPVVETALVN--SYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
TK H ++++ P+ + L++ + S SG D+ ARKLF +M + + MI G
Sbjct: 27 TKQAHALLLRTHLLHNPLFSSKLISFLALSHSG-DLNYARKLFTQMQNPDPFICNTMIRG 85
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y R + A SL+ M +R VP N
Sbjct: 86 YARSQNPYEAVSLYYFMVERGVPVDN---------------------------------- 111
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
T L+A G ++LG+ H V +NG D F+ NALI Y CGS A FD
Sbjct: 112 YTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDE 171
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
++ + + +WN MIN+ G SE + + +EM + N+RPD VT +SL+ AC G +
Sbjct: 172 STVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLD--NLRPDEVTMVSLVPACAQLGNL 229
Query: 371 EQGR-------------------AYFKLMTKTYRIEPQIE-----------HYGCLVDLL 400
E+G+ A + K IE E + ++ L
Sbjct: 230 ERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGL 289
Query: 401 GRAGRFEEALEVVKGM---KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGG 457
++G F+EAL + + M KIE DE+ +L+ C G D ++ + LI+ N
Sbjct: 290 AKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKY-IHLLIDKFEINCD 348
Query: 458 YGI--MLANIYGELGKWDEVRKVRKMLKDRNAY 488
+ L ++Y + G D +V + ++ RN +
Sbjct: 349 LVLETALVDMYAKCGSIDLALQVFRRMRVRNVF 381
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/502 (33%), Positives = 274/502 (54%), Gaps = 44/502 (8%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL-SNLTYARFIFDHLTTPNTYLYTAMI 84
+NH+ +L + L G +L+ C ++L+YAR IFD + P+T+ + +I
Sbjct: 1 MNHIYKLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTII 60
Query: 85 TAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG 144
A+A S + M P+ F +P VLK+C + G + H+ + K G
Sbjct: 61 RAHADSSPSFSLSLFSKMTM---AGVSPDHFTFPFVLKACARL--QTGLDL-HSLLFKLG 114
Query: 145 FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLF 204
F+ V+ L++ Y G + A K F+E
Sbjct: 115 FDSDVYVQNGLIHFYGCCGF-LDFALKAFEE----------------------------- 144
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
MP+RD+ +W+S+IA +NG +A++ F+RM ++ ++P++V ++ +SAI G
Sbjct: 145 --MPERDLVSWSSMIACFAKNGFGYEALALFQRM--QLVGTVKPDEVIVLSVVSAISILG 200
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
L+LGK I G++ RNGL+ + AL+DM+ +CG ++E+ R FD ++ + +W ++IN
Sbjct: 201 DLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALIN 260
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
A+HG+S ++ +F EM ++H +PD VTF +L AC+HGGLV +G F+ + Y
Sbjct: 261 GLAVHGRSAEALRMFYEM---RNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEY 317
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFA 444
+EP EHYGC+VDLLGRAG EA + V GM I P+ ++W +LL C + + AE
Sbjct: 318 GMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKV 377
Query: 445 VKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
+K+ E+D + G ++L+N+YG +G+W E VR ++++ K PGCS I V+ +H+
Sbjct: 378 KEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHE 437
Query: 505 FHSLDKTHPRTEEIYDALESMV 526
F + D HP+ E I + L SM+
Sbjct: 438 FVAGDNNHPQFESIREFLVSMI 459
>gi|242061948|ref|XP_002452263.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
gi|241932094|gb|EES05239.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
Length = 603
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/420 (36%), Positives = 242/420 (57%), Gaps = 14/420 (3%)
Query: 113 NQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKL 172
++F V +C + +R + +H +V SG E ++ A+VN+YS++ + AR L
Sbjct: 175 DRFTVVSVATACAGIRAARPLREMHGAVVVSGMELTVIMANAMVNAYSKAWR-VEEARHL 233
Query: 173 FDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAI 232
FD++S R+ V+WT+MISGY +V + A +FD MPD+D AW ++I+G QNG A+
Sbjct: 234 FDQISIRDNVTWTSMISGYCQVKKLDEALQVFDMMPDKDRVAWTALISGHEQNGEEDTAL 293
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSF---ISN 289
F RM +++ + P LV L A G++ GK +H + R + D F I N
Sbjct: 294 ELFERM---LAEGVSPTTFALVSVLGACAKLGLVTRGKELHCSILRRSIGSDPFNIFIHN 350
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
AL+DMY KCG + A F R ++ SWNSM+ F+ +G + S+ +FEEM+
Sbjct: 351 ALVDMYSKCGDMTAAMAVFHRMPERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVA---G 407
Query: 350 IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEA 409
+RP VTF+++L AC+H GLV GR + M + + +EP+ EHY +D LGR + EEA
Sbjct: 408 VRPTHVTFLAVLTACSHSGLVSNGRLILESM-EDHGVEPRAEHYAAFIDALGRNRQLEEA 466
Query: 410 LEVVKGM--KIEPDEV-VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIY 466
+E +K + +I P WG+LL C+++G + AE + L +++P N G +ML+NIY
Sbjct: 467 IEFIKDLPSRIGPGTAGSWGALLGACRLHGNIELAEEVAEFLFKLEPGNSGRYVMLSNIY 526
Query: 467 GELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
G+WD+ R+VR ++K++ K SWIEV H F + D +H +EIY+ L ++
Sbjct: 527 AAAGQWDDARRVRGLMKEKGLKKDQAYSWIEVRSLKHVFVADDMSHCEADEIYEMLGKLL 586
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 163/347 (46%), Gaps = 45/347 (12%)
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
S DVL R + VH ++VK+ + ++ LV YSR + A FD++ +N
Sbjct: 47 STGDVL--RLGRAVHARLVKTALTSHTLLSNRLVALYSRLPSS-AAAVAAFDDLPHKNAH 103
Query: 183 SWTAMISGYTRVGD-IKNAASLFDSMP--DRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
S+ +++ R D +A LFD+MP R++ ++N++++ +G ++A+ R+
Sbjct: 104 SYNTLLAALLRRPDTFPDALHLFDTMPADARNLVSYNTLMSSLVHHGRQAEALRVVARLA 163
Query: 240 ME--VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
+ + + ++ T+V +A + + +HG V +G++L ++NA+++ Y K
Sbjct: 164 RDRFLGPGLAMDRFTVVSVATACAGIRAARPLREMHGAVVVSGMELTVIMANAMVNAYSK 223
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSF--------AL--------------------- 328
++EAR FD+ S + +W SMI+ + AL
Sbjct: 224 AWRVEEARHLFDQISIRDNVTWTSMISGYCQVKKLDEALQVFDMMPDKDRVAWTALISGH 283
Query: 329 --HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA-YFKLMTKTYR 385
+G+ + ++ +FE M+ + P +S+L AC GLV +G+ + ++ ++
Sbjct: 284 EQNGEEDTALELFERMLA---EGVSPTTFALVSVLGACAKLGLVTRGKELHCSILRRSIG 340
Query: 386 IEP-QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+P I + LVD+ + G A+ V M E D + W S++ G
Sbjct: 341 SDPFNIFIHNALVDMYSKCGDMTAAMAVFHRMP-ERDFISWNSMVTG 386
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 149/360 (41%), Gaps = 78/360 (21%)
Query: 29 LKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYA 88
L+++ + G T A +V + K + AR +FD ++ + +T+MI+ Y
Sbjct: 195 LREMHGAVVVSGMELTVIMANAMVNAYS-KAWRVEEARHLFDQISIRDNVTWTSMISGYC 253
Query: 89 ------------------------------SQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
Q +A L+ M+ G P F
Sbjct: 254 QVKKLDEALQVFDMMPDKDRVAWTALISGHEQNGEEDTALELFERMLAEGV-SPTTFALV 312
Query: 119 HVLKSCPDV-LESRGTKMVHTQIVKSGFEQYP---VVETALVNSYSRSGNDIGIARKLFD 174
VL +C + L +RG K +H I++ P + ALV+ YS+ G D+ A +F
Sbjct: 313 SVLGACAKLGLVTRG-KELHCSILRRSIGSDPFNIFIHNALVDMYSKCG-DMTAAMAVFH 370
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
M +R+ +SW +M++G++ G K + ++F+ M ++AG
Sbjct: 371 RMPERDFISWNSMVTGFSHNGLGKQSLAIFEEM----------LVAG------------- 407
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
+RP VT + L+A H+G++ G++I + +G++ + A ID
Sbjct: 408 -----------VRPTHVTFLAVLTACSHSGLVSNGRLILESMEDHGVEPRAEHYAAFIDA 456
Query: 295 YGKCGSLKEARRAFDRNSKKRL-----TSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
G+ L+EA F ++ R+ SW +++ + LHG E + V E + + + N
Sbjct: 457 LGRNRQLEEAIE-FIKDLPSRIGPGTAGSWGALLGACRLHGNIELAEEVAEFLFKLEPGN 515
>gi|242045040|ref|XP_002460391.1| hypothetical protein SORBIDRAFT_02g027420 [Sorghum bicolor]
gi|241923768|gb|EER96912.1| hypothetical protein SORBIDRAFT_02g027420 [Sorghum bicolor]
Length = 573
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/432 (37%), Positives = 248/432 (57%), Gaps = 10/432 (2%)
Query: 97 AFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF-EQYPVVETAL 155
A L+ ++R G P+ Y L SC + +H K GF + V L
Sbjct: 62 ALRLFDHLLRSGA-DPDPAAYELALASCARGKDRATAAQLHAHAAKRGFLASHRRVRCRL 120
Query: 156 VNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG-DIKNAASLFDSMPDRDVPA 214
V++Y+ G + AR++FD +D ++V+W ++ GY + G D F MP RD +
Sbjct: 121 VHAYAVCGM-LPHARRVFDGGTDNDMVAWNCLLRGYAQEGGDADLLRDFFARMPSRDSVS 179
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
WN+V++ C NG + +AI+ FR M S +P++VTLV +SAI + G L G H
Sbjct: 180 WNTVLSLCVVNGEYDEAIAVFREM--LASQECQPDRVTLVSVVSAIAYLGALAQGLWAHA 237
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR-NSKKRLTSWNSMINSFALHGQSE 333
YV R G++++ +S+ALI+MY KCG L+ A FD K+ L +WN+M+ F +G S
Sbjct: 238 YVIRKGVEVEEKLSSALINMYSKCGFLEGAVYVFDNVRGKRSLDTWNAMLAGFTANGCSG 297
Query: 334 NSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
++ +F M + + P+ +TF +LNAC+HGGLVE+G F+ M++ Y IEP I HY
Sbjct: 298 RALALFTRM---ETTGLMPNKITFNCILNACSHGGLVEEGMRCFQRMSRVYGIEPDIAHY 354
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDP 453
GC+VDL RAG FE+A E+++ M +EPD + +LL C+ + + + A +LIE P
Sbjct: 355 GCMVDLFCRAGMFEKAEEIIQIMPMEPDASMLKALLGACRTHKNLELGKKAGHRLIEAAP 414
Query: 454 NNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHP 513
N+ ++L+NIY G W V KVRK++ DR KTPG S +E++ +H+F S DK+H
Sbjct: 415 NDHAGYVLLSNIYALDGNWGRVHKVRKLMLDRGVLKTPGSSSVELNGVIHEFISGDKSHS 474
Query: 514 RTEEIYDALESM 525
R +IY L+ +
Sbjct: 475 RKRDIYKMLDEI 486
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/471 (33%), Positives = 269/471 (57%), Gaps = 45/471 (9%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM-VRRGQPQPNQFI---- 116
L AR +FD + + +T+MI Y +A A SL++D+ V F+
Sbjct: 127 LEDARKVFDEIPKRDIVSWTSMIRGY-DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMG 185
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGND-IGIARKLFDE 175
V+ +C V T+ +H+ ++K GF++ V L+++Y++ G + +ARK+
Sbjct: 186 LVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKI--- 242
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
FD + D+D ++NS+++ Q+G+ ++A F
Sbjct: 243 ----------------------------FDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 236 RRMGMEVSDNIRP-NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
RR+ V + + N +TL L A+ H+G L++GK IH V R GL+ D + ++IDM
Sbjct: 275 RRL---VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KCG ++ AR+AFDR K + SW +MI + +HG + ++ +F M+ D +RP+
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI---DSGVRPNY 388
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
+TF+S+L AC+H GL +G +F M + +EP +EHYGC+VDLLGRAG ++A ++++
Sbjct: 389 ITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
MK++PD ++W SLL C+I+ + AE +V +L E+D +N GY ++L++IY + G+W +
Sbjct: 449 RMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKD 508
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
V +VR ++K+R K PG S +E++ +VH F D+ HP+ E+IY+ L +
Sbjct: 509 VERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAEL 559
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 161/354 (45%), Gaps = 41/354 (11%)
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
A + A A AFS R + P + +P +K+C + + K H Q G+
Sbjct: 52 ARSGDSAEALLAFSSMRKL----SLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGY 107
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLF- 204
+ V +AL+ YS G + ARK+FDE+ R++VSWT+MI GY G+ +A SLF
Sbjct: 108 QSDIFVSSALIVMYSTCGK-LEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFK 166
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
D + D + D F MG+ V+++ A S + G
Sbjct: 167 DLLVDEND----------------DDDAMFLDSMGL----------VSVISACSRVPAKG 200
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS--LKEARRAFDRNSKKRLTSWNSM 322
L + IH +V + G D + N L+D Y K G + AR+ FD+ K S+NS+
Sbjct: 201 ---LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257
Query: 323 INSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK 382
++ +A G S + VF +++ + + + +T ++L A +H G + G+ + +
Sbjct: 258 MSVYAQSGMSNEAFEVFRRLVK--NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR 315
Query: 383 TYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
+E + ++D+ + GR E A + MK + W +++ G ++G
Sbjct: 316 M-GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHG 367
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 96/172 (55%), Gaps = 7/172 (4%)
Query: 198 KNAASLFDSMPDR-DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
+N +LF+ D+ DV +WNSVIA ++G ++A+ F M ++ P + + CA
Sbjct: 26 QNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMR---KLSLYPTRSSFPCA 82
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
+ A + GK H + G D F+S+ALI MY CG L++AR+ FD K+ +
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDI 142
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQ---DHNIRPDGVTFISLLNACT 365
SW SMI + L+G + +++ +F++++ + D + D + +S+++AC+
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
>gi|225452668|ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Vitis vinifera]
Length = 511
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/518 (32%), Positives = 271/518 (52%), Gaps = 47/518 (9%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHL 72
++ +++ + C+++ K + + G N+ KL+ FC L S +L+YA IF +
Sbjct: 5 KRCISLAQSCSNMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQI 64
Query: 73 TTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
PN + Y +I AY+ S P A F L D G P+Q +P ++ +C + L
Sbjct: 65 QNPNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVG---PDQHTFPFIISACTNSLWM 121
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
K +H ++K+G SDR+V TA++
Sbjct: 122 LLGKQIHNWVLKNGVAS-----------------------------SDRHVQ--TALVRF 150
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y + +A LFD +P+ DV WN ++ G + GL +A++ FR M + + P++
Sbjct: 151 YAECCAMGDARKLFDEIPNLDVVQWNVLLNGYVRRGLAPEALNAFRNM---LVSGVEPDE 207
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVY-RNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
L AL G LQ GK IH YV R L+ D FI AL+DMY KCG + + F+
Sbjct: 208 FCLTTALKGCAQLGALQQGKWIHEYVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFE 267
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
+K+ + SW++MI FALHG ++ E M + +RPDGV + ++ AC H GL
Sbjct: 268 GMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQ--VEDGLRPDGVVLLGVIMACAHAGL 325
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
E+G+ + M Y I P+ EHY C+VDLL RAG+ +EAL++++ M ++P VWG+LL
Sbjct: 326 QEEGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEALKLIRRMPMKPRAAVWGALL 385
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNG----GYGIMLANIYGELGKWDEVRKVRKMLKDR 485
+GC+ + D AE A ++L+ + +G G + L+NIY K ++ ++R+M+ D+
Sbjct: 386 SGCRTHNNVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACRIRRMIGDK 445
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
PGCS IEV+ +V+QF S D +HP +I++ L+
Sbjct: 446 RIKTKPGCSLIEVEGEVNQFVSGDISHPCLAQIHEMLD 483
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 184/575 (32%), Positives = 281/575 (48%), Gaps = 89/575 (15%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMIT 85
++ KQ L LG Q + L+R +L + YA +F PN +LY +I
Sbjct: 16 LHQAKQCHCLLLRLGLHQDTYLINLLLR-SSLHFAATQYATVVFAQTPHPNIFLYNTLIR 74
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM-VHTQIVKSG 144
S A A S+Y M + G P+ F +P VLK+C + + +H+ ++K+G
Sbjct: 75 GMVSNDAF-RDAVSVYASMRQHGFA-PDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTG 132
Query: 145 F-------------------------------EQYPVVETALVNSYSRSG---NDIGIAR 170
F E+ V TA++ Y SG +G+ R
Sbjct: 133 FDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFR 192
Query: 171 KLF----------------------DEMSDR-------------NVVSWTAMISGYTRVG 195
L D S R NV T+++ Y + G
Sbjct: 193 GLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCG 252
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
++ A +FD M ++DV W+++I G NG+ +A+ F M E N+RP+ +V
Sbjct: 253 SMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRE---NVRPDCYAMVG 309
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN-----ALIDMYGKCGSLKEARRAFDR 310
SA G L+LG G +D D F+SN ALID Y KCGS+ +A+ F
Sbjct: 310 VFSACSRLGALELGNWARGL-----MDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKG 364
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
+K +N++I+ A+ G + VF +M++ ++PDG TF+ LL CTH GLV
Sbjct: 365 MRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKV---GMQPDGNTFVGLLCGCTHAGLV 421
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
+ G YF M+ + + P IEHYGC+VDL RAG EA ++++ M +E + +VWG+LL
Sbjct: 422 DDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLG 481
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
GC+++ T AE +K+LIE++P N G+ ++L+NIY +WDE K+R L + K
Sbjct: 482 GCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKL 541
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PGCSW+EVD VH+F D +HP + +IY+ LES+
Sbjct: 542 PGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESL 576
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 271/528 (51%), Gaps = 65/528 (12%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + AR +FD + N +TA++ Y A SL+ M P+ N+
Sbjct: 90 MKNGEIDEARKVFDLMPERNVVSWTALVKGYVHN-GKVDVAESLFWKM-----PEKNKVS 143
Query: 117 YPHVL----------KSC------PDVLESRGTKMVH-----------TQIVKSGFEQYP 149
+ +L +C PD T M+H +I E+
Sbjct: 144 WTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV 203
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
+ T +V Y ++ N + ARK+FD M ++ VSWT+M+ GY + G I++A LF+ MP
Sbjct: 204 ITWTTMVTGYGQN-NRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPV 262
Query: 210 RDVPAWNSVIAGCTQNGLFSDA------------------ISFFRRMGMEVS-------- 243
+ V A N++I+G Q G + A I R G E+
Sbjct: 263 KPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILM 322
Query: 244 --DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+RP TL+ LS L GK +H + R D+D ++++ L+ MY KCG L
Sbjct: 323 QKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGEL 382
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+++ FDR K + WNS+I+ +A HG E ++ VF EM + +P+ VTF++ L
Sbjct: 383 VKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMP--LSGSTKPNEVTFVATL 440
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
+AC++ G+VE+G ++ M + ++P HY C+VD+LGRAGRF EA+E++ M +EPD
Sbjct: 441 SACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPD 500
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
VWGSLL C+ + + D AEF KKLIEI+P N G I+L+N+Y G+W +V ++RK+
Sbjct: 501 AAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKL 560
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQF-HSLDKTHPRTEEIYDALESMVAL 528
+K R K+PGCSW EV+ +VH F +HP E I L+ + L
Sbjct: 561 MKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGL 608
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 134/273 (49%), Gaps = 29/273 (10%)
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
ARKLFDEM DRN++SW ++SGY + G+I A +FD MP+R+V +W +++ G NG
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 229 SDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG-YVYRNGLDLDSFI 287
A S F +M N+V+ L G LQ G++ +Y D D+
Sbjct: 127 DVAESLFWKMP-------EKNKVSWTVML-----IGFLQDGRIDDACKLYEMIPDKDNIA 174
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
++I K G + EAR FD S++ + +W +M+ + + + +++ +F+ M +
Sbjct: 175 RTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE 234
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE 407
V++ S+L G +E F++M ++P I ++ LG+ G
Sbjct: 235 -------VSWTSMLMGYVQNGRIEDAEELFEVMP----VKPVIA-CNAMISGLGQKGEIA 282
Query: 408 EALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+A V MK E ++ W +++ KI+ R F
Sbjct: 283 KARRVFDSMK-ERNDASWQTVI---KIHERNGF 311
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 79/208 (37%), Gaps = 34/208 (16%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L++ ++H KQ+ + L Q + Y ++ +K L ++ IFD +
Sbjct: 337 ILSVCASLASLHHGKQVHAQLVRC-QFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK 395
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ ++ ++I+ YAS A ++ +M G +PN+ + L +C
Sbjct: 396 DIIMWNSIISGYASH-GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS---------- 444
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+ +V+ G + Y +E+ G+ + M+ R G
Sbjct: 445 -YAGMVEEGLKIYESMESVF-----------GVKPI---------TAHYACMVDMLGRAG 483
Query: 196 DIKNAASLFDSMP-DRDVPAWNSVIAGC 222
A + DSM + D W S++ C
Sbjct: 484 RFNEAMEMIDSMTVEPDAAVWGSLLGAC 511
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/523 (31%), Positives = 279/523 (53%), Gaps = 41/523 (7%)
Query: 5 TNQLNQTLNQQ-VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL-KLSNL 62
+++LN N+Q L++L+RC + KQ+ + + LG +F LV C L + ++
Sbjct: 22 SSELNAKFNEQGWLSLLKRCKSMEEFKQVHAHILKLGLFYDSFCGSNLVASCALSRWGSM 81
Query: 63 TYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
YA IF + P ++ Y MI + A LY +M+ RG +P+ F YP VLK
Sbjct: 82 EYACSIFSQIEEPGSFEYNTMIRGNVNS-MDLEEALLLYVEMLERG-IEPDNFTYPFVLK 139
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
+C ++ + +H + K+G E V+ + ++G
Sbjct: 140 ACSLLVALKEGVQIHAHVFKAGLE---------VDVFVQNG------------------- 171
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
+IS Y + G I++A +F+ M ++ V +W+S+I ++ + + M E
Sbjct: 172 ----LISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGE- 226
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
R + LV ALSA H G LG+ IHG + RN +L+ + +LIDMY KCGSL+
Sbjct: 227 -GRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLE 285
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
+ F + K S+ MI A+HG+ ++ VF +M+ + + PD V ++ +L+
Sbjct: 286 KGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREAVRVFSDML---EEGLTPDDVVYVGVLS 342
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H GLV +G F M + I+P I+HYGC+VDL+GRAG +EA +++K M I+P++
Sbjct: 343 ACSHAGLVNEGLQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPND 402
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
VVW SLL+ CK++ + E A + + ++ +N G ++LAN+Y KW V ++R +
Sbjct: 403 VVWRSLLSACKVHHNLEIGEIAAENIFRLNKHNPGDYLVLANMYARAKKWANVARIRTEM 462
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+++ +TPG S +E ++ V++F S DK+ P E IYD ++ M
Sbjct: 463 AEKHLVQTPGFSLVEANRNVYKFVSQDKSQPICETIYDMIQQM 505
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 181/578 (31%), Positives = 285/578 (49%), Gaps = 108/578 (18%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDH 71
N L +L C +LKQ+ S + G T F KL+ FC + NL+YA +F+
Sbjct: 32 NHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFES 91
Query: 72 LTTPNTYLYTAMI--TAYASQPAHA---------------SSAFS-LYRDMVRRGQPQPN 113
+ PN +++ MI + +S P A S F L + + G Q
Sbjct: 92 IEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEG 151
Query: 114 QFIYPHVLK----SCPDV------LESRGTKMVHTQIVKSG------------------- 144
+ I+ HVLK S P V + ++ ++ + ++V S
Sbjct: 152 KQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLR 211
Query: 145 ---------FEQYPVVET----ALVNSYSRSGNDIGIARKLFDEMSDRNVV--------- 182
FE+ PV + A++ Y++SG A F EM NV
Sbjct: 212 GCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGR-FEEALAFFQEMKRANVAPNESTMVTV 270
Query: 183 -----------------SW-------------TAMISGYTRVGDIKNAASLFDSMPDRDV 212
SW A+I Y++ GD+ A LF+ + ++D+
Sbjct: 271 LSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDI 330
Query: 213 PAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVI 272
+WN +I G + + +A++ FR+M N+ PN VT V L A + G L LGK I
Sbjct: 331 ISWNVMIGGYSHMNSYKEALALFRKMQ---QSNVEPNDVTFVSILPACAYLGALDLGKWI 387
Query: 273 HGYVYRNGLDL-DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
H Y+ + L L ++ + +LIDMY KCG+++ A++ F K L SWN+MI+ A+HG
Sbjct: 388 HAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGH 447
Query: 332 SENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE 391
+ ++ +F +M +D PD +TF+ +L+AC+H GLVE GR F M + Y I P+++
Sbjct: 448 ANMALELFRQM---RDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQ 504
Query: 392 HYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
HYGC++DLLGRAG F+EA ++K M+++PD +WGSLL C+++G + EFA K L E+
Sbjct: 505 HYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFEL 564
Query: 452 DPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
+P N G ++L+NIY G+WD+V ++R L D+ K
Sbjct: 565 EPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
>gi|326520249|dbj|BAK07383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 176/519 (33%), Positives = 283/519 (54%), Gaps = 28/519 (5%)
Query: 27 NHLKQLQSFLTTLGQSQTNFYAF---------KLVRFCTLKLSNLTYARFIFDHL--TTP 75
N L +L + L + S+T F L+ + + L A + D + ++
Sbjct: 71 NRLIELYAMLNSPAASRTAFEDLPYRNAHSYNNLLAALSRGSATLPDALHLLDAMPASSR 130
Query: 76 NTYLYTAMITAYA--SQPAHASSAFS-LYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
N Y +I+A A + A F+ L RD + ++F V +C + R
Sbjct: 131 NVVSYNTIISALARNGRQGEALRVFARLARDRCLGPEVALDRFAVVSVASACAGMGALRP 190
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+ +H +V SG E ++ A+V++YS++G + AR LF++MS ++ VSWT+MI+GY
Sbjct: 191 LREMHGAVVVSGVEVTVIMANAMVDAYSKAGR-MEDARTLFNQMSIQDTVSWTSMIAGYC 249
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
R + A +F MP++D AW ++I+G QNG A+ F++M +E + P
Sbjct: 250 RAKRLDEAIRVFHMMPEQDTIAWTALISGHEQNGEEDAALDLFQQMLVE---GMAPTPFA 306
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSF---ISNALIDMYGKCGSLKEARRAFD 309
LV +L A G++ G+ +HG++ R + LD F I NALIDMY KCG + A F
Sbjct: 307 LVSSLGACAKLGLVTRGREVHGFILRRRIGLDPFNIFIHNALIDMYSKCGDMATAMLVFA 366
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
R S++ SWNSM+ F+ +GQ + S+ +F+ M+ D ++P VTF+++L AC+H GL
Sbjct: 367 RMSERDFISWNSMVTGFSHNGQGKQSLAMFKRML---DAEVQPTYVTFLAVLTACSHAGL 423
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM--KIEPDEV-VWG 426
V GR + M + + +EP+ EHY +D LGR + EEA E +KG+ +I P WG
Sbjct: 424 VTDGRRILESM-QYHGVEPRAEHYASFIDALGRNHQLEEASEFIKGLSSRIGPGTTGSWG 482
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+LL C+++G T+ AE + L +++P N G +ML+NIY G+WD+ R++R ++K++
Sbjct: 483 ALLGACRVHGNTEIAEKVAESLFQLEPGNSGRYVMLSNIYAAAGQWDDARRIRAIMKEKG 542
Query: 487 AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K CSWIEV H F + D +H EIY L+ +
Sbjct: 543 LRKDQACSWIEVRSAKHMFVADDTSHCEANEIYGMLDRL 581
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 153/414 (36%), Positives = 231/414 (55%), Gaps = 39/414 (9%)
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
P+ I+P K+C + K VH ++K+G+
Sbjct: 153 PDDHIFPSATKACAILGRCDVGKSVHCLVIKTGY-------------------------- 186
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
D +V ++++ Y + GDIK A ++FD MP R+V +W+ +I G TQ G +A
Sbjct: 187 ------DVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEA 240
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
+ F+ +E D N TL + G +L+LGK IHG ++ DL F+ ++L
Sbjct: 241 MRLFKEALLEGLD---VNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSL 297
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIR 351
I +Y KCG ++ A R FD K L WN+M+ + A H ++ + +F +M ++ +R
Sbjct: 298 ISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKM---ENAGMR 354
Query: 352 PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALE 411
P+ +TF+ +L AC+H GLVE+G+ YF LM K Y IEP +HY +VDLLGRAG+ +EAL
Sbjct: 355 PNFITFLCVLYACSHAGLVEEGKKYFALMKK-YEIEPGTQHYASMVDLLGRAGKLQEALS 413
Query: 412 VVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGK 471
V+KGM EP E VWG+ + GC+I+G TD A FA K+ E+ + G +ML+N Y G+
Sbjct: 414 VIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGR 473
Query: 472 WDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+++ K RKML+DR K G SWIE +VH+F + D+ H R +EIY LE +
Sbjct: 474 YEDAAKARKMLRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDL 527
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 175/414 (42%), Gaps = 81/414 (19%)
Query: 109 QPQPNQFI----YPHVLKSCPDVLESRGT---KMVHTQIVKSGFEQYPVVETALVNSYSR 161
Q PN+F Y H+ SR + +H I+KSG + P+V L+N YS+
Sbjct: 42 QNSPNRFCSEKKYGHICDLLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSK 101
Query: 162 SGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAG 221
+ + ++ ++F+E ++ +W+++IS +
Sbjct: 102 TQLPL-LSSQVFEESERKSSTTWSSVISSF------------------------------ 130
Query: 222 CTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL 281
QN AI +F RM + +N+ P+ A A G +GK +H V + G
Sbjct: 131 -AQNEEPVLAIQYFCRM---IGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGY 186
Query: 282 DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEE 341
D+D F+ ++L+DMY KCG +KEAR FD + + SW+ MI + G+ E ++ +F+E
Sbjct: 187 DVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKE 246
Query: 342 MMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT------------------ 383
+ + + T S++ C L+E G+ L KT
Sbjct: 247 ALL---EGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSK 303
Query: 384 -------YRI--EPQIEHYGCLVDLL---GRAGRFEEALEVVKGMK---IEPDEVVWGSL 428
YR+ E I++ G +L + +EA ++ M+ + P+ + + +
Sbjct: 304 CGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCV 363
Query: 429 LNGCKIYGRTDFAE--FAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
L C G + + FA+ K EI+P Y M+ ++ G GK E V K
Sbjct: 364 LYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMV-DLLGRAGKLQEALSVIK 416
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 130/325 (40%), Gaps = 52/325 (16%)
Query: 15 QVLAILERCN-----HINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
+ AIL RC+ H +K +G S + YA K ++ AR +F
Sbjct: 163 KACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYA---------KCGDIKEARNVF 213
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
D + N ++ MI Y H A L+++ + G N F V++ C
Sbjct: 214 DEMPHRNVVSWSGMIYGYTQLGEH-EEAMRLFKEALLEGL-DVNDFTLSSVIRVCGSATL 271
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
K +H K+ ++ V ++L++ YS+ G G A ++FDE+ +N+ W AM
Sbjct: 272 LELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEG-AYRVFDEVPIKNLGMWNAM-- 328
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
+ C Q+ +A F +M + +RPN
Sbjct: 329 -----------------------------LIACAQHAHTKEAFDLFTKME---NAGMRPN 356
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+T +C L A H G+++ GK + + ++ + +++D+ G+ G L+EA
Sbjct: 357 FITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIK 416
Query: 310 RNSKKRLTS-WNSMINSFALHGQSE 333
+ S W + I +HG ++
Sbjct: 417 GMPTEPTESVWGAFITGCRIHGNTD 441
>gi|297833170|ref|XP_002884467.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330307|gb|EFH60726.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 293/519 (56%), Gaps = 17/519 (3%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLG-QSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
Q L +++ + ++ +KQ+ + G S N+ LV+F ++L +L +A +F +
Sbjct: 133 QTFLHLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKF-YMELGSLGFAEKVFAIM 191
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
P+ + MI YA Q A LY MV G +P+++ +L C + + R
Sbjct: 192 PQPDVSSFNVMIVGYAKQ-GFGLEALELYYKMVSDG-IEPDEYTLLGLLVCCGHLSDIRL 249
Query: 133 TKMVHTQIVKSG--FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
K VH I + G + ++ AL++ Y + + G+A++ FD + +++ SW M+ G
Sbjct: 250 GKGVHGWIERRGPVYSSNLILRNALLDMYFKC-KESGLAKRAFDALKKKDMRSWNTMVVG 308
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS--FFRRMGMEVSDNIRP 248
+ R+GD++ A ++FD MP RD+ +WNS++ ++ G A+ F+ M + + ++P
Sbjct: 309 FVRLGDMEAAQAVFDQMPQRDLVSWNSLLFCYSKKGCDQRAVRELFYE---MLIVEKVKP 365
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
++VT+V +S + G L G+ +HG + R L+ D+F+S+ALIDMY KCG ++ A F
Sbjct: 366 DRVTMVSLISGAANNGELSHGRWVHGLMIRLQLEGDAFLSSALIDMYCKCGLIERAFMVF 425
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
++K + W SMI FA HG + ++ +F+ M Q+ ++ P+ VT +++L AC+H G
Sbjct: 426 KTATEKDVPLWTSMITGFAFHGYGQQALQLFKRM---QEEDVTPNKVTLLAVLTACSHSG 482
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG-MKIEPDEVVWGS 427
LVE+G F M + + P+ EHYG LVDLL RAGR EEA ++V+ M + P + +WGS
Sbjct: 483 LVEEGLHVFYHMKEKFGFHPETEHYGSLVDLLCRAGRLEEAKDIVQNKMPMRPSQSMWGS 542
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
+L+ C+ + AE A+ +L++++P G ++L+NIY +G+W K R+ ++ R
Sbjct: 543 ILSACREGEDIETAELALSELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMESRGV 602
Query: 488 YKTPGCSWIEVDKQVHQFHSLDK-THPRTEEIYDALESM 525
KT G S + + VH F + +K HPR EI L+ +
Sbjct: 603 KKTAGYSSVVGVEGVHSFVAAEKQNHPRWTEIKRILQHL 641
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 209/480 (43%), Gaps = 79/480 (16%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL-SNLTYARFIF- 69
LN Q L +LE C+ N KQ+ + + F +L+ F + NL A+ +F
Sbjct: 32 LNHQSLVLLENCSSRNQFKQVLAQIMRFNLIGVTFPMSRLIFFSAITYPENLDLAKLLFL 91
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
D PN ++Y MI+A +S + F LY M+R + P++ + H++K+ + E
Sbjct: 92 DFTPNPNVFVYNTMISAVSSS---KNECFGLYSSMIRY-RVSPDRQTFLHLMKASSFLSE 147
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
K +H I+ SG GN + W +++
Sbjct: 148 ---VKQIHCHIIVSGCLSL--------------GNYL-----------------WNSLVK 173
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
Y +G + A +F MP DV ++N +I G + G +A+ + +M VSD I P+
Sbjct: 174 FYMELGSLGFAEKVFAIMPQPDVSSFNVMIVGYAKQGFGLEALELYYKM---VSDGIEPD 230
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS--FISNALIDMYGKCGSLKEARRA 307
+ TL+ L GH ++LGK +HG++ R G S + NAL+DMY KC A+RA
Sbjct: 231 EYTLLGLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILRNALLDMYFKCKESGLAKRA 290
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR-----------------CQDHNI 350
FD KK + SWN+M+ F G E + VF++M + C +
Sbjct: 291 FDALKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPQRDLVSWNSLLFCYSKKGCDQRAV 350
Query: 351 R-------------PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLV 397
R PD VT +SL++ + G + GR LM + ++E L+
Sbjct: 351 RELFYEMLIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLMIRL-QLEGDAFLSSALI 409
Query: 398 DLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID--PNN 455
D+ + G E A V K E D +W S++ G +G A K++ E D PN
Sbjct: 410 DMYCKCGLIERAFMVFK-TATEKDVPLWTSMITGFAFHGYGQQALQLFKRMQEEDVTPNK 468
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 173/515 (33%), Positives = 262/515 (50%), Gaps = 51/515 (9%)
Query: 16 VLAILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTL--KLSNLTYARFIFD 70
+L IL + L+ Q+ S T G ++ L F +L K + A +F
Sbjct: 224 LLDILPAVAELQELRLGMQIHSLATKTGCYSHDYV---LTGFISLYSKCGKIKMASTLFR 280
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
P+ Y AMI Y S + SL+++++ G + + V S +L
Sbjct: 281 EFRRPDIVAYNAMIHGYTSN-GETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLML-- 337
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
+H +KS F + V TAL YS+
Sbjct: 338 --IYAIHGYSLKSNFLSHTSVSTALTTVYSK----------------------------- 366
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
+ +I++A LFD P++ +P+WN++I+G TQNGL DAIS FR M + PN
Sbjct: 367 ---LNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ---NSEFSPNP 420
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
VT+ C LSA G L LGK +H V + ++S ALI MY KCGS+ EARR FD
Sbjct: 421 VTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDF 480
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
KK +WN+MI+ + LHG + ++ +F EM+ + I P VTF+ +L AC+H GLV
Sbjct: 481 MPKKNEVTWNTMISGYGLHGHGQEALTIFSEML---NSGIAPTPVTFLCVLYACSHAGLV 537
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
++G F M Y EP ++HY C+VD+LGRAG + AL+ ++ M I+P VW +LL
Sbjct: 538 KEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLG 597
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
C+I+ T+ A +KL E+DP+N GY ++L+NI+ + + VR+ K R K
Sbjct: 598 ACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKA 657
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PG + IE+ + H F S D++HP+ + I++ LE +
Sbjct: 658 PGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKL 692
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 170/372 (45%), Gaps = 44/372 (11%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + +T L+ MI+ Y + S ++RD++ + + +L +
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVES-IQVFRDLINESCTRLDTTTLLDILPAV 231
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
++ E R +H+ K+G + V T ++ YS+ G I +A LF E ++V++
Sbjct: 232 AELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK-IKMASTLFREFRRPDIVAY 290
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
AMI GYT G+ + + SLF + +++G
Sbjct: 291 NAMIHGYTSNGETELSLSLFKEL----------MLSGA---------------------- 318
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ TLV + GH L L IHGY ++ + +S AL +Y K ++ A
Sbjct: 319 --KLKSSTLVSLVPVSGH---LMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESA 373
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R+ FD + +K L SWN+MI+ + +G +E++I +F EM Q+ P+ VT +L+AC
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM---QNSEFSPNPVTITCILSAC 430
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
G + G+ L+ T E I L+ + + G EA + M + +EV
Sbjct: 431 AQLGALSLGKWVHDLVRST-DFESSIYVSTALIGMYAKCGSIAEARRLFDFMP-KKNEVT 488
Query: 425 WGSLLNGCKIYG 436
W ++++G ++G
Sbjct: 489 WNTMISGYGLHG 500
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/508 (20%), Positives = 202/508 (39%), Gaps = 84/508 (16%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFK----LVRFCTLKLSNLT---YARFIF 69
L + +R I+HL Q +Q + F+ L+ T +LS+L YAR IF
Sbjct: 24 LDLFKRSTSISHLAQ--------THAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIF 75
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
+ P+ +L+ ++ ++ + SS +++ + + +PN Y + + +
Sbjct: 76 LSVQRPDVFLFNVLMRGFSVNESPHSS-LAVFAHLRKSTDLKPNSSTYAFAISAASGFRD 134
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
R ++H Q + G + ++ + +V Y + + ARK+FD M +++ + W MIS
Sbjct: 135 DRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWR-VEDARKVFDRMPEKDTILWNTMIS 193
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GY + N ++ ++I FR + E R +
Sbjct: 194 GYRK-------------------------------NEMYVESIQVFRDLINE--SCTRLD 220
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
TL+ L A+ L+LG IH + G ++ I +Y KCG +K A F
Sbjct: 221 TTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFR 280
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
+ + ++N+MI+ + +G++E S+ +F+E+M + T +SL+ H L
Sbjct: 281 EFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLS---GAKLKSSTLVSLVPVSGHLML 337
Query: 370 VEQGRAY------------FKLMTKTYRIEPQIE---------------HYGCLVDLLGR 402
+ Y +T Y +IE + ++ +
Sbjct: 338 IYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 403 AGRFEEALEVVKGMK---IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGY- 458
G E+A+ + + M+ P+ V +L+ C G ++ + D + Y
Sbjct: 398 NGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYV 457
Query: 459 GIMLANIYGELGKWDEVRKVRKMLKDRN 486
L +Y + G E R++ + +N
Sbjct: 458 STALIGMYAKCGSIAEARRLFDFMPKKN 485
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/505 (33%), Positives = 264/505 (52%), Gaps = 27/505 (5%)
Query: 25 HINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMI 84
H LK+ + + QS ++ + +K + L AR +FD + + + MI
Sbjct: 182 HNGRLKEARRLFES--QSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMI 239
Query: 85 TAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG 144
+ YA Q S A L+ + R + +V D E+R
Sbjct: 240 SGYA-QVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVD--EARKY----------- 285
Query: 145 FEQYPVVE----TALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
F++ PV A++ Y + + IA +LF+ M RN+ SW MI+GY + G I A
Sbjct: 286 FDEMPVKNEISYNAMLAGYVQYKKMV-IAGELFEAMPCRNISSWNTMITGYGQNGGIAQA 344
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
LFD MP RD +W ++I+G QNG + +A++ F M D N+ T CALS
Sbjct: 345 RKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMK---RDGESSNRSTFSCALSTC 401
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
L+LGK +HG V + G + F+ NAL+ MY KCGS EA F+ +K + SWN
Sbjct: 402 ADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWN 461
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
+MI +A HG ++ +FE M + ++PD +T + +L+AC+H GL+++G YF M
Sbjct: 462 TMIAGYARHGFGRQALVLFESMKKA---GVKPDEITMVGVLSACSHSGLIDRGTEYFYSM 518
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+ Y ++P +HY C++DLLGRAGR EEA +++ M +P WG+LL +I+G T+
Sbjct: 519 DRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTEL 578
Query: 441 AEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDK 500
E A + + +++P N G ++L+N+Y G+W +V K+R +++ K G SW+EV
Sbjct: 579 GEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQN 638
Query: 501 QVHQFHSLDKTHPRTEEIYDALESM 525
++H F D HP + IY LE +
Sbjct: 639 KIHTFSVGDCFHPEKDRIYAFLEEL 663
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 191/428 (44%), Gaps = 54/428 (12%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
L+ + + AR +FD + + + + M+T Y + A L+ M ++ N +
Sbjct: 88 LRNAKFSLARDLFDKMPERDLFSWNVMLTGYV-RNRRLGEAHKLFDLMPKKDVVSWNAML 146
Query: 117 YPHVLKSCPDVLESRGTKMVH----------TQIVKSG--------FEQYPVVE----TA 154
+ D KM H V +G FE E
Sbjct: 147 SGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNC 206
Query: 155 LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA 214
L+ Y + N +G AR+LFD M R+V+SW MISGY +VGD+ A LF+ P RDV
Sbjct: 207 LMGGYVKR-NMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFT 265
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA-IGHTGMLQLGKVIH 273
W ++++G QNG+ +A +F M ++ N+++ L+ + + M+ G++
Sbjct: 266 WTAMVSGYVQNGMVDEARKYFDEMPVK-------NEISYNAMLAGYVQYKKMVIAGELFE 318
Query: 274 GYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSE 333
RN + S+ N +I YG+ G + +AR+ FD ++ SW ++I+ +A +G E
Sbjct: 319 AMPCRN---ISSW--NTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYE 373
Query: 334 NSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
++ +F EM R + + R TF L+ C +E G+ + K
Sbjct: 374 EALNMFVEMKRDGESSNRS---TFSCALSTCADIAALELGKQVHGQVVKAGF------ET 424
Query: 394 GCLVD--LLG---RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI--YGRTDFAEFAVK 446
GC V LLG + G +EA +V +G++ E D V W +++ G +GR F
Sbjct: 425 GCFVGNALLGMYFKCGSTDEANDVFEGIE-EKDVVSWNTMIAGYARHGFGRQALVLFESM 483
Query: 447 KLIEIDPN 454
K + P+
Sbjct: 484 KKAGVKPD 491
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 120/231 (51%), Gaps = 19/231 (8%)
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
V A+++ Y R+ +AR LFD+M +R++ SW M++GY R + A LFD MP
Sbjct: 78 VSYNAMISGYLRNAK-FSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPK 136
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
+DV +WN++++G QNG +A F +M N ++ L+A H G L+
Sbjct: 137 KDVVSWNAMLSGYAQNGFVDEAREVFNKMPHR-------NSISWNGLLAAYVHNGRLKEA 189
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
+ + + ++ +L S+ N L+ Y K L +AR+ FDR + + SWN+MI+ +A
Sbjct: 190 RRL--FESQSNWELISW--NCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQV 245
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
G + +F E IR D T+ ++++ G+V++ R YF M
Sbjct: 246 GDLSQAKRLFNE------SPIR-DVFTWTAMVSGYVQNGMVDEARKYFDEM 289
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 109/257 (42%), Gaps = 55/257 (21%)
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
+ D ++V+W IS + R G +A +F+SMP R ++N++I+G +N FS A
Sbjct: 40 KFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDL 99
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
F +M P + D F N ++
Sbjct: 100 FDKM---------PER---------------------------------DLFSWNVMLTG 117
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y + L EA + FD KK + SWN+M++ +A +G + + VF +M +
Sbjct: 118 YVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKM-------PHRNS 170
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
+++ LL A H G +++ R F+ + ++ + CL+ + +A ++
Sbjct: 171 ISWNGLLAAYVHNGRLKEARRLFESQSNW-----ELISWNCLMGGYVKRNMLGDARQLFD 225
Query: 415 GMKIEPDEVVWGSLLNG 431
M + D + W ++++G
Sbjct: 226 RMPVR-DVISWNTMISG 241
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 245/461 (53%), Gaps = 41/461 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K +L A +F+ + +T+MIT Y + + A L+ +M RG P+ +
Sbjct: 400 KCGDLNSAIRVFERMDEKTVVSWTSMITGYVRE-GLSDGAIKLFDEMKSRGVV-PDVYAV 457
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+L +C + K+VH I ++ E V AL + Y++ G+
Sbjct: 458 TSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGS------------- 504
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+K+A +F M +DV +WN++I G T+N L ++A++ F
Sbjct: 505 -------------------MKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAE 545
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M E +P+ T+ C L A L G+ IHGY RNG D +++NA++DMY K
Sbjct: 546 MQRES----KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVK 601
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG L AR FD K L SW MI + +HG +I F +M + I PD V+F
Sbjct: 602 CGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQM---RMTGIEPDEVSF 658
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
IS+L AC+H GL+++G F +M K +IEP +EHY C+VDLL R G +A + +K M
Sbjct: 659 ISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMP 718
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
I+PD +WG+LL GC+I+ AE +++ E++P N GY ++LANIY E KW+EV+K
Sbjct: 719 IKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQK 778
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
+RK + R K PGCSWIE+ +++ F + D + P+ ++I
Sbjct: 779 LRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKI 819
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 193/418 (46%), Gaps = 47/418 (11%)
Query: 18 AILERC---NHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
+IL+ C I ++++S + + G KLV F +K +L R +FD L+
Sbjct: 155 SILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLV-FMYVKCGDLKEGRMVFDKLSE 213
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
+L+ MI+ Y+ + S +L++ M+ G +PN + + +LK V +
Sbjct: 214 SKIFLWNLMISEYSGSGNYGES-INLFKQMLELG-IKPNSYTFSSILKCFAAVARVEEGR 271
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
VH I K GF Y V +L++ Y + RK
Sbjct: 272 QVHGLICKLGFNSYNTVVNSLISFYF-------VGRK----------------------- 301
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
++ A LFD + DRDV +WNS+I+G +NGL I F +M + + + T+V
Sbjct: 302 --VRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKM---LVFGVDIDLATMV 356
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNG-LDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
A + G L LGKV+H Y + LD + +N L+DMY KCG L A R F+R +
Sbjct: 357 NVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDE 416
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K + SW SMI + G S+ +I +F+EM + + PD S+LNAC G ++ G
Sbjct: 417 KTVVSWTSMITGYVREGLSDGAIKLFDEM---KSRGVVPDVYAVTSILNACAINGNLKSG 473
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ + + +E L D+ + G ++A +V MK + D + W +++ G
Sbjct: 474 KIVHDYIREN-NLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK-KKDVISWNTMIGG 529
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 150/321 (46%), Gaps = 43/321 (13%)
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
DR V ++ Y++ GD+ +A +F+ M ++ V +W S+I G + GL AI F
Sbjct: 385 DREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDE 444
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M S + P+ + L+A G L+ GK++H Y+ N L+ +SF+SNAL DMY K
Sbjct: 445 MK---SRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAK 501
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CGS+K+A F KK + SWN+MI + + ++ +F EM R +PDG T
Sbjct: 502 CGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQR----ESKPDGTTV 557
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKT------YRIEPQIEHY---GCLV----------- 397
+L AC +++GR + Y ++ Y G LV
Sbjct: 558 ACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPN 617
Query: 398 -DLL---------GRAGRFEEALEVVKGMK---IEPDEVVWGSLLNGCKIYGRTD--FAE 442
DL+ G G EA+ M+ IEPDEV + S+L C G D +
Sbjct: 618 KDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKI 677
Query: 443 FAV-KKLIEIDPNNGGYGIML 462
F + KK +I+PN Y M+
Sbjct: 678 FNIMKKECQIEPNLEHYACMV 698
>gi|414879991|tpg|DAA57122.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 868
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/423 (36%), Positives = 257/423 (60%), Gaps = 15/423 (3%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD P + A + AY+ P A L++ R + F++ VLK+C +
Sbjct: 440 VFDQSPAP----WRAFLKAYSHGP-FPLEALHLFKHA--RQHLADDTFVFTFVLKACAGL 492
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
R +H +V+ GFE + V TAL+N Y S + ARK+FDEM +NVVSW M
Sbjct: 493 GWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVE-ARKVFDEMPVKNVVSWNVM 551
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I+G+ G+++ A LFD MP R+V +W +I G T+ L+++A++ R M ++ I
Sbjct: 552 ITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHM---MAGGIS 608
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P+++T++ + AI + G + +G++++GY + G+ D+ + N+LID+Y K GS++ + +
Sbjct: 609 PSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKV 668
Query: 308 FDRNSKKR-LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
FD +R L SW S+I+ FA+HG S ++ +F EM R I+P+ +TF+S++NAC+H
Sbjct: 669 FDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRA---GIKPNRITFLSVINACSH 725
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GGLVEQG A+FK M Y I+P+I+H+GC++D+LGRAGR EA ++++G+ +E + VW
Sbjct: 726 GGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWR 785
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
LL C YG E A+K + +++ +GG +L+N+ ELG++ + + RK+L R
Sbjct: 786 ILLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRK 845
Query: 487 AYK 489
K
Sbjct: 846 IVK 848
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 19/255 (7%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
+ YAR +FD + N +T +I Y +A A +L R M+ G P++ V+
Sbjct: 561 VEYARLLFDQMPCRNVVSWTGLIDGYTRACLYA-EALTLLRHMMAGGI-SPSEITVLAVI 618
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD-RN 180
+ ++ +M++ K G V +L++ Y++ G+ + + K+FDEM D RN
Sbjct: 619 PAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGS-VQNSLKVFDEMLDRRN 677
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSM------PDRDVPAWNSVIAGCTQNGLFSDAISF 234
+VSWT++ISG+ G A LF M P+R + SVI C+ GL ++F
Sbjct: 678 LVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRIT--FLSVINACSHGGLVEQGLAF 735
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGML-QLGKVIHGYVYRNGLDLDSFISNALID 293
F+ M E NI P C + +G G L + ++I G ++++ + L+
Sbjct: 736 FKSMVYEY--NIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGL----PMEVNVTVWRILLG 789
Query: 294 MYGKCGSLKEARRAF 308
K G + RA
Sbjct: 790 CCSKYGEVAMGERAI 804
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/565 (31%), Positives = 274/565 (48%), Gaps = 57/565 (10%)
Query: 11 TLNQQVLAILERCNHINHLKQLQS----FLTTLGQSQ-----TNFYAFKLVRFCT-LKLS 60
T + +L +L C HL L++ L L S N + C+ L L+
Sbjct: 10 TSGESLLRLLAACRAPAHLPSLRAAHARLLVLLHPSHPSAAHANVKLIQAYAACSALPLA 69
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQ-PNQFIYPH 119
+ D + T + +I A + H A L+ M RG P+ + YP
Sbjct: 70 HTVLESSSPDGRSRTTTVCFNVLIRALTASSLH-RDALVLFASMRPRGPACFPDHYTYPL 128
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
LKSC + +H+ + K ++ V + ++ YSR G A ++FD M R
Sbjct: 129 ALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPED-AYRVFDGMPHR 187
Query: 180 NVVSWTAMISGYTRVG--------------------------------------DIKNAA 201
+VVSW AMI+G+ RVG DI+
Sbjct: 188 DVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVR 247
Query: 202 SLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIG 261
+FD+M +++ +WN+++A N A+ F M ME D + P+ +TL L G
Sbjct: 248 RVFDNMQFKELISWNAMLAVYANNEFHVKAVELF--MLME-KDEVEPDSITLATVLPPCG 304
Query: 262 HTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNS 321
+GK IH + R + + + NAL+DMY CG LK+AR FD S + + SW S
Sbjct: 305 ELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTS 364
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
+I+++ HG ++ +FE+M+ + PD + F+++L AC+H GL+ G+ YF MT
Sbjct: 365 IISAYGKHGHGREAVDLFEKML---GQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMT 421
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
Y I P+ EHY C+VDLLGRAG EA + + M IEP+E VWG+LL C+I+ D
Sbjct: 422 SRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVWGALLQACRIHSNMDIG 481
Query: 442 EFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQ 501
A L + P GY ++L+N+Y G+W +V VR ++ ++ K PG S +E+ Q
Sbjct: 482 LVAADNLFSLVPEQTGYYVLLSNMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQ 541
Query: 502 VHQFHSLDKTHPRTEEIYDALESMV 526
VH FH D+ HP++E IY L+ ++
Sbjct: 542 VHTFHIGDRCHPQSEMIYHKLDELL 566
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 238/371 (64%), Gaps = 18/371 (4%)
Query: 155 LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA 214
L++SYS+ ++G+ D N+ A++ Y + DI++A +F+ + ++DV +
Sbjct: 32 LLHSYSK---ELGL---------DENLSVNNAILDMYCKCDDIESAQEVFNRIREKDVLS 79
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
W S+++G ++G F ++++ FR+M + I P+++TLV LSA TG L GK IH
Sbjct: 80 WTSMLSGLAKSGYFQESLALFRKMQLH---KIEPDEITLVGVLSACAQTGALDQGKYIHL 136
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
+ + ++ D + AL+DMY KCGS+ A + F R + + +WN+MI A+HG E+
Sbjct: 137 LIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGED 196
Query: 335 SICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG 394
+I +F++M + + PD VTFI+LL AC+H GLV++G A F+ M ++IEP++EHYG
Sbjct: 197 AISLFDQM---EXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYG 253
Query: 395 CLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPN 454
C+VDLL RA + ++AL ++ M I+ + V+W +LL C+ G D AE +++IE++P+
Sbjct: 254 CVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIXRRVIELEPD 313
Query: 455 NGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPR 514
+ G +ML+N+Y + +WD K+RK +K++ KTPGCSWIE++ +HQF + D++H +
Sbjct: 314 SCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQ 373
Query: 515 TEEIYDALESM 525
TE+IY +E M
Sbjct: 374 TEQIYAMIEEM 384
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 113/198 (57%), Gaps = 5/198 (2%)
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
DN+RP++VT+V + A G L+ GK++H Y GLD + ++NA++DMY KC ++
Sbjct: 5 DNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIES 64
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A+ F+R +K + SW SM++ A G + S+ +F +M Q H I PD +T + +L+A
Sbjct: 65 AQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKM---QLHKIEPDEITLVGVLSA 121
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C G ++QG+ Y L+ + I + LVD+ + G + AL+V + M++ +
Sbjct: 122 CAQTGALDQGK-YIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVF 179
Query: 424 VWGSLLNGCKIYGRTDFA 441
W +++ G ++G + A
Sbjct: 180 TWNAMIGGLAMHGHGEDA 197
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 114/230 (49%), Gaps = 11/230 (4%)
Query: 16 VLAILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
+++++ C + +L K L S+ LG + N + K ++ A+ +F+ +
Sbjct: 14 MVSLVPACAQLGNLERGKLLHSYSKELGLDE-NLSVNNAILDMYCKCDDIESAQEVFNRI 72
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
+ +T+M++ A + + + +L+R M + + +P++ VL +C
Sbjct: 73 REKDVLSWTSMLSGLA-KSGYFQESLALFRKM-QLHKIEPDEITLVGVLSACAQTGALDQ 130
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
K +H I K V+ETALV+ Y++ G+ I +A ++F M RNV +W AMI G
Sbjct: 131 GKYIHLLIDKFEINCDLVLETALVDMYAKCGS-IDLALQVFRRMRVRNVFTWNAMIGGLA 189
Query: 193 RVGDIKNAASLFDSMP-DRDVP---AWNSVIAGCTQNGLFSDAISFFRRM 238
G ++A SLFD M D+ +P + +++ C+ GL + ++ F+ M
Sbjct: 190 MHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAM 239
>gi|345505226|gb|AEN99837.1| chlororespiratory reduction 4, partial [Lobularia maritima]
Length = 570
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 171/481 (35%), Positives = 260/481 (54%), Gaps = 25/481 (5%)
Query: 31 QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQ 90
Q+ FLT F L+ +K S L YAR +FD + ++ Y +MI Y +
Sbjct: 106 QIHGFLTKTVICSDLFLQNCLIGL-YIKCSCLGYARQVFDRMPQRDSVSYNSMIDGYV-K 163
Query: 91 PAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP- 149
SA L+ M + + L S ++ + I F + P
Sbjct: 164 CGLIESARELFDLMPKEKKN----------LISWNSMIGGYAQREDGVDIASKLFAEMPE 213
Query: 150 ---VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDS 206
+ +L++ Y + G I A+ LFD M R+VV+W MI GY ++G + A SLFD
Sbjct: 214 KDLISWNSLIDGYVKHGR-IEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHKAKSLFDV 272
Query: 207 MPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGML 266
MP RDV A+NS++ G QN +A+ F ME ++ P++ TLV LSAI G L
Sbjct: 273 MPHRDVVAYNSMMGGYVQNKYHMEALEVF--YDMEKESHLSPDETTLVIVLSAIAQLGRL 330
Query: 267 QLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSF 326
IH Y+ LD + ALIDMY KCGS+++A F+ K + WN+MI
Sbjct: 331 SKAVDIHLYIVEKRFLLDGKLGVALIDMYSKCGSIQQAMAVFEGIENKSIDHWNAMIGGL 390
Query: 327 ALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRI 386
A+HG E + F+ +M + I+PD +TF+ +LNAC+H GLV++G F+LM + ++I
Sbjct: 391 AVHGLGEAA---FDMLMEIEKRFIKPDYITFVGVLNACSHSGLVKEGLLCFELMRRKHKI 447
Query: 387 EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
EP+++HYGC+VDLL R+G E A ++ M IEP++V+W + LN C + + E V
Sbjct: 448 EPRLQHYGCMVDLLARSGSIELAKHLISEMPIEPNDVIWRTFLNACSHHKEFETRELVVA 507
Query: 447 K--LIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQ 504
+ +++ N Y ++L+N+Y W++VR+VR M+K+R K PGCSWIE+D +VH+
Sbjct: 508 ENLILQAGYNPSSY-VLLSNMYASFEMWEDVRRVRTMMKERKIEKVPGCSWIELDGKVHE 566
Query: 505 F 505
F
Sbjct: 567 F 567
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 185/396 (46%), Gaps = 28/396 (7%)
Query: 64 YARFIFDHLTTP----NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPH 119
+AR IF + +L+ A+I ++ S A L M+ P ++F
Sbjct: 33 FARCIFHEYHHHEEVEDPFLWNAVIKSH-SHGVDPRQALFLLCSMIENNVP-VDKFSLSL 90
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
V K+C + ++ +H + K+ ++ L+ Y + +G AR++FD M R
Sbjct: 91 VTKACSRLGFAKEGMQIHGFLTKTVICSDLFLQNCLIGLYIKCSC-LGYARQVFDRMPQR 149
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMP--DRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+ VS+ +MI GY + G I++A LFD MP +++ +WNS+I G Q D + +
Sbjct: 150 DSVSYNSMIDGYVKCGLIESARELFDLMPKEKKNLISWNSMIGGYAQR---EDGVDIASK 206
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
+ E+ + + ++ + G ++ K + + R D +ID Y K
Sbjct: 207 LFAEMPEK---DLISWNSLIDGYVKHGRIEDAKGLFDVMPRR----DVVTWATMIDGYAK 259
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
G + +A+ FD + + ++NSM+ + + ++ VF +M + + ++ PD T
Sbjct: 260 LGFVHKAKSLFDVMPHRDVVAYNSMMGGYVQNKYHMEALEVFYDMEK--ESHLSPDETTL 317
Query: 358 ISLLNACTH-GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+ +L+A G L + + ++ K + ++ ++ L+D+ + G ++A+ V +G+
Sbjct: 318 VIVLSAIAQLGRLSKAVDIHLYIVEKRFLLDGKLG--VALIDMYSKCGSIQQAMAVFEGI 375
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
+ + + W +++ G ++G E A L+EI+
Sbjct: 376 ENKSID-HWNAMIGGLAVHG---LGEAAFDMLMEIE 407
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 21/242 (8%)
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
WN+VI + A+ M + +N+ ++ +L A G + G IHG
Sbjct: 53 WNAVIKSHSHGVDPRQALFLLCSM---IENNVPVDKFSLSLVTKACSRLGFAKEGMQIHG 109
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
++ + + D F+ N LI +Y KC L AR+ FDR ++ S+NSMI+ + G E+
Sbjct: 110 FLTKTVICSDLFLQNCLIGLYIKCSCLGYARQVFDRMPQRDSVSYNSMIDGYVKCGLIES 169
Query: 335 SICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE--H 392
+ +F+ M + + + I + + GG ++ + +K + P+ +
Sbjct: 170 ARELFDLMPKEKKNLISWNSMI----------GGYAQREDG-VDIASKLFAEMPEKDLIS 218
Query: 393 YGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
+ L+D + GR E+A + M D V W ++++G Y + F A K L ++
Sbjct: 219 WNSLIDGYVKHGRIEDAKGLFDVMP-RRDVVTWATMIDG---YAKLGFVHKA-KSLFDVM 273
Query: 453 PN 454
P+
Sbjct: 274 PH 275
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 248/448 (55%), Gaps = 41/448 (9%)
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
+ +MI AY Q S A L+++MVRRG + F VL + + + G H Q
Sbjct: 208 WNSMIVAYG-QHQEGSKALGLFQEMVRRGL-NVDMFTLASVLTAFTCLEDLSGGLQFHGQ 265
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
++K+GF Q V + L++ YS+ G + RK+F+E+++ ++V
Sbjct: 266 LIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV----------------- 308
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLF-SDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
WN++++G +QN F DA+ FR+M RPN + VC +S
Sbjct: 309 --------------LWNTMVSGYSQNEEFLEDALECFRQMQ---GIGYRPNDCSFVCVIS 351
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSF-ISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
A + GK IH ++ + + + NALI MY KCG+L++ARR FDR ++
Sbjct: 352 ACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTV 411
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
S NSMI +A HG S+ +F+ M+ Q I P +TFIS+L+AC H G VE+G YF
Sbjct: 412 SLNSMIAGYAQHGIEMESLHLFQWMLERQ---IAPTSITFISVLSACAHTGRVEEGWNYF 468
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
+M + + IEP+ EHY C++DLLGRAG+ EA ++ M P + W SLL C+ +G
Sbjct: 469 NMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGN 528
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
+ A A ++++++P+N ++L+N+Y G+W+EV VRK ++DR K PGCSWIE
Sbjct: 529 IELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIE 588
Query: 498 VDKQVHQFHSLDKTHPRTEEIYDALESM 525
V K++H F + D +HP +EIY+ LE M
Sbjct: 589 VKKRIHVFVAEDSSHPMIKEIYEFLEEM 616
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 150/325 (46%), Gaps = 29/325 (8%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ H+LK+C + K +H+ +KS + YS+ G + ARK F ++
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGR-LAWARKAFQDI 69
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF- 235
SD NV S+ A+I+ Y + A LFD +P+ D+ ++N++I+ G + A+ F
Sbjct: 70 SDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFS 129
Query: 236 --RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
R MG+++ +T C +G G L H +G D ++NAL+
Sbjct: 130 GMREMGLDMDXFTLSAVITACC--DDVGLIGQL------HSVAVSSGFDSYVSVNNALLT 181
Query: 294 MYGKCGSLKEARRAF-DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
YGK G L +A+R F + SWNSMI ++ H + ++ +F+EM+R +
Sbjct: 182 YYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVR---RGLNV 238
Query: 353 DGVTFISLLNACT-----HGGLVEQGRAYFKLMTKTYRIEPQIEHYGC-LVDLLGRAGRF 406
D T S+L A T GGL G +L+ + Q H G L+DL + G
Sbjct: 239 DMFTLASVLTAFTCLEDLSGGLQFHG----QLIKTGFH---QNSHVGSGLIDLYSKCGGG 291
Query: 407 EEALEVVKGMKIEPDEVVWGSLLNG 431
V EPD V+W ++++G
Sbjct: 292 MSDCRKVFEEITEPDLVLWNTMVSG 316
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 202/467 (43%), Gaps = 64/467 (13%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQF 115
K L +AR F ++ PN + + A+I AYA S+P A F D + P+P+
Sbjct: 55 KCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLF----DQI----PEPDLV 106
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
Y ++ + D E+ + + + + G + +A++ + +D+G+ +L
Sbjct: 107 SYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACC---DDVGLIGQLHSV 163
Query: 176 MSDRNVVSWT----AMISGYTRVGDIKNAASLFDSMPD-RDVPAWNSVIAGCTQNGLFSD 230
S+ A+++ Y + GD+ +A +F M RD +WNS+I Q+ S
Sbjct: 164 AVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSK 223
Query: 231 AISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNA 290
A+ F+ M V + + TL L+A L G HG + + G +S + +
Sbjct: 224 ALGLFQEM---VRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSG 280
Query: 291 LIDMYGKC-GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQS-ENSICVFEEMMRCQDH 348
LID+Y KC G + + R+ F+ ++ L WN+M++ ++ + + E+++ F +M Q
Sbjct: 281 LIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQM---QGI 337
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
RP+ +F+ +++AC++ QG+ L K+ +I L+ + + G ++
Sbjct: 338 GYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQD 397
Query: 409 ALEVVKGM----------------------------------KIEPDEVVWGSLLNGCKI 434
A + M +I P + + S+L+ C
Sbjct: 398 ARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAH 457
Query: 435 YGRTD--FAEF-AVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
GR + + F +K+ I+P Y M+ ++ G GK E +
Sbjct: 458 TGRVEEGWNYFNMMKEKFNIEPEAEHYSCMI-DLLGRAGKLSEAENL 503
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 255/466 (54%), Gaps = 25/466 (5%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L A+ +F + P+ Y M++ Y ++ A + + DM + P N I
Sbjct: 19 KRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRN-SNMERAQAFFEDMPIKDTPSWNTMIT 77
Query: 118 PHV----LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLF 173
+ D+ TK V V A+++ Y G D+ A KLF
Sbjct: 78 GFAQNQQMDKARDLFLIMPTKNV-------------VTWNAMISGYVECG-DLDSALKLF 123
Query: 174 DEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
++ ++VV+WTAMI+GY ++G I A LF+ MP++++ WN++IAG +N D +
Sbjct: 124 EKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVK 183
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
FR M V I+PN TL AL LQLG+ +H V ++ L D+ +LI
Sbjct: 184 LFRTM---VGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLIS 240
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
MY KCG L++ + F + ++ + +WN+MI+ +A HG+ + ++ +F+EM+ + ++PD
Sbjct: 241 MYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMI---EKGMKPD 297
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
+TF+++L AC H G + G YF M K Y + + +HY C+VDLLGRAG+ EA++++
Sbjct: 298 WITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLI 357
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
+ M +P V+G+LL C+I+ T+ AEFA +KL+ +DP + + LAN+Y +WD
Sbjct: 358 EKMPFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWD 417
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
V +VRK +K KTPG SWIEV HQF S DK HP I+
Sbjct: 418 HVARVRKSMKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHPELASIH 463
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 138/302 (45%), Gaps = 18/302 (5%)
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
V +++ S+ + A++LF ++ + + VS+ M+S Y R +++ A + F+ MP
Sbjct: 7 VTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMPI 66
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
+D P+WN++I G QN A F M + N VT +S G ++ G
Sbjct: 67 KDTPSWNTMITGFAQNQQMDKARDLFLIMPTK-------NVVTWNAMIS-----GYVECG 114
Query: 270 KVIHGYVYRNGLDLDSFIS-NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
+ S ++ A+I Y K G + A R F++ +K L +WN+MI +
Sbjct: 115 DLDSALKLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIE 174
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
+ ++E+ + +F M+ I+P+ T S L C+ ++ GR +L+ K+ +
Sbjct: 175 NHRAEDGVKLFRTMV---GFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDD 231
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL 448
L+ + + G E+ ++ + D V W ++++G +G A ++
Sbjct: 232 TTAGTS-LISMYCKCGVLEDGWKLFVQVP-RRDVVTWNAMISGYAQHGEGKKALGLFDEM 289
Query: 449 IE 450
IE
Sbjct: 290 IE 291
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 248/448 (55%), Gaps = 41/448 (9%)
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
+ +MI AY Q S A L+++MVRRG + F VL + + + G H Q
Sbjct: 208 WNSMIVAYG-QHQEGSKALGLFQEMVRRGL-NVDMFTLASVLTAFTCLEDLSGGLQFHGQ 265
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
++K+GF Q V + L++ YS+ G + RK+F+E+++ ++V
Sbjct: 266 LIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV----------------- 308
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLF-SDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
WN++++G +QN F DA+ FR+M RPN + VC +S
Sbjct: 309 --------------LWNTMVSGYSQNEEFLEDALECFRQMQ---GIGYRPNDCSFVCVIS 351
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSF-ISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
A + GK IH ++ + + + NALI MY KCG+L++ARR FDR ++
Sbjct: 352 ACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTV 411
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
S NSMI +A HG S+ +F+ M+ Q I P +TFIS+L+AC H G VE+G YF
Sbjct: 412 SLNSMIAGYAQHGIEMESLHLFQWMLERQ---IAPTSITFISVLSACAHTGRVEEGWNYF 468
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
+M + + IEP+ EHY C++DLLGRAG+ EA ++ M P + W SLL C+ +G
Sbjct: 469 NMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGN 528
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
+ A A ++++++P+N ++L+N+Y G+W+EV VRK ++DR K PGCSWIE
Sbjct: 529 IELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIE 588
Query: 498 VDKQVHQFHSLDKTHPRTEEIYDALESM 525
V K++H F + D +HP +EIY+ LE M
Sbjct: 589 VKKRIHVFVAEDSSHPMIKEIYEFLEEM 616
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 150/325 (46%), Gaps = 29/325 (8%)
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ H+LK+C + K +H+ +KS + YS+ G + ARK F ++
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGR-LAWARKAFQDI 69
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF- 235
SD NV S+ A+I+ Y + A LFD +P+ D+ ++N++I+ G + A+ F
Sbjct: 70 SDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFS 129
Query: 236 --RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
R MG+++ +T C +G G L H +G D ++NAL+
Sbjct: 130 GMREMGLDMDGFTLSAVITACC--DDVGLIGQL------HSVAVSSGFDSYVSVNNALLT 181
Query: 294 MYGKCGSLKEARRAF-DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
YGK G L +A+R F + SWNSMI ++ H + ++ +F+EM+R +
Sbjct: 182 YYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVR---RGLNV 238
Query: 353 DGVTFISLLNACT-----HGGLVEQGRAYFKLMTKTYRIEPQIEHYGC-LVDLLGRAGRF 406
D T S+L A T GGL G +L+ + Q H G L+DL + G
Sbjct: 239 DMFTLASVLTAFTCLEDLSGGLQFHG----QLIKTGFH---QNSHVGSGLIDLYSKCGGG 291
Query: 407 EEALEVVKGMKIEPDEVVWGSLLNG 431
V EPD V+W ++++G
Sbjct: 292 MSDCRKVFEEITEPDLVLWNTMVSG 316
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 202/467 (43%), Gaps = 64/467 (13%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQF 115
K L +AR F ++ PN + + A+I AYA S+P A F D + P+P+
Sbjct: 55 KCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLF----DQI----PEPDLV 106
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
Y ++ + D E+ + + + + G + +A++ + +D+G+ +L
Sbjct: 107 SYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACC---DDVGLIGQLHSV 163
Query: 176 MSDRNVVSWT----AMISGYTRVGDIKNAASLFDSMPD-RDVPAWNSVIAGCTQNGLFSD 230
S+ A+++ Y + GD+ +A +F M RD +WNS+I Q+ S
Sbjct: 164 AVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSK 223
Query: 231 AISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNA 290
A+ F+ M V + + TL L+A L G HG + + G +S + +
Sbjct: 224 ALGLFQEM---VRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSG 280
Query: 291 LIDMYGKC-GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQS-ENSICVFEEMMRCQDH 348
LID+Y KC G + + R+ F+ ++ L WN+M++ ++ + + E+++ F +M Q
Sbjct: 281 LIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQM---QGI 337
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
RP+ +F+ +++AC++ QG+ L K+ +I L+ + + G ++
Sbjct: 338 GYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQD 397
Query: 409 ALEVVKGM----------------------------------KIEPDEVVWGSLLNGCKI 434
A + M +I P + + S+L+ C
Sbjct: 398 ARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAH 457
Query: 435 YGRTD--FAEF-AVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
GR + + F +K+ I+P Y M+ ++ G GK E +
Sbjct: 458 TGRVEEGWNYFNMMKEKFNIEPEAEHYSCMI-DLLGRAGKLSEAENL 503
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/470 (34%), Positives = 257/470 (54%), Gaps = 45/470 (9%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + L A +FD + N +T MI+AY+ H A L M+R G +PN +
Sbjct: 59 VKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIH-QKALELLVLMLRDG-VRPNVYT 116
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
Y VL++C + + R M+H I+K G E + Y RS
Sbjct: 117 YSSVLRACNGMSDVR---MLHCGIIKEGLES---------DVYVRS-------------- 150
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
A+I + ++G+ ++A S+FD M D WNS+I G QN A+ F+
Sbjct: 151 ---------ALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFK 201
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
RM Q TL L A +L+LG H ++ + D D ++NAL+DMY
Sbjct: 202 RMK---RAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYC 256
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCGSL++ARR F++ ++ + +W++MI+ A +G S+ ++ +FE M + +P+ +T
Sbjct: 257 KCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELM---KSSGTKPNYIT 313
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+ +L AC+H GL+E G YF+ M K Y I P EHYGC++DLLG+AG+ ++A++++ M
Sbjct: 314 IVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEM 373
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
+ EPD V W +LL C++ AE+A KK+I +DP + G +L+NIY KWD V
Sbjct: 374 ECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVE 433
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
++RK ++D K PGCSWIEV+KQ+H F D++HP+ E+ L ++
Sbjct: 434 EIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVEVNKKLNQLI 483
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 147/331 (44%), Gaps = 52/331 (15%)
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
+I+ Y + + +A LFD MP R+V +W ++I+ ++ + A+ M + D
Sbjct: 53 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLM---LRDG 109
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
+RPN T L A GM + +++H + + GL+ D ++ +ALID++ K G ++A
Sbjct: 110 VRPNVYTYSSVLRAC--NGMSDV-RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDAL 166
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
FD WNS+I FA + +S+ ++ +F+ M R + T S+L ACT
Sbjct: 167 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRA---GFIAEQATLTSVLRACT 223
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
L+E G + + + + LVD+ + G E+A V MK E D + W
Sbjct: 224 GLALLELG---MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMK-ERDVITW 279
Query: 426 GSLLNGCKIYGRTDFA----------------------EFA----------------VKK 447
++++G G + A FA +KK
Sbjct: 280 STMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK 339
Query: 448 LIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
L I+P YG M+ ++ G+ GK D+ K+
Sbjct: 340 LYGINPGREHYGCMI-DLLGKAGKLDDAVKL 369
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 120/253 (47%), Gaps = 12/253 (4%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
++L CN ++ ++ L + G +++ Y + KL A +FD + T +
Sbjct: 119 SVLRACNGMSDVRMLHCGIIKEGL-ESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDA 177
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
++ ++I +A Q + + A L++ M R G Q VL++C + H
Sbjct: 178 IVWNSIIGGFA-QNSRSDVALELFKRMKRAGFI-AEQATLTSVLRACTGLALLELGMQAH 235
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
IVK ++Q ++ ALV+ Y + G+ + AR++F++M +R+V++W+ MISG + G
Sbjct: 236 VHIVK--YDQDLILNNALVDMYCKCGS-LEDARRVFNQMKERDVITWSTMISGLAQNGYS 292
Query: 198 KNAASLFDSMPDRDV-PAWNSVIA---GCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
+ A LF+ M P + +++ C+ GL D +FR M+ I P +
Sbjct: 293 QEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFR--SMKKLYGINPGREHY 350
Query: 254 VCALSAIGHTGML 266
C + +G G L
Sbjct: 351 GCMIDLLGKAGKL 363
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 24/188 (12%)
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
G +I ++Y NG F+ N LI+MY K L +A + FD+ ++ + SW +MI++++
Sbjct: 32 GNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSK 91
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT--------HGGLVEQGRAYFKLM 380
+ ++ + M+R +RP+ T+ S+L AC H G++++G
Sbjct: 92 CKIHQKALELLVLMLR---DGVRPNVYTYSSVLRACNGMSDVRMLHCGIIKEG------- 141
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+E + L+D+ + G E+AL V M + D +VW S++ G R+D
Sbjct: 142 -----LESDVYVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDV 195
Query: 441 AEFAVKKL 448
A K++
Sbjct: 196 ALELFKRM 203
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/433 (35%), Positives = 249/433 (57%), Gaps = 8/433 (1%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + +TAM++ + A +++ DM G P ++ + V+ +C
Sbjct: 222 ARGVFDGAEHRDAFTWTAMVSCFERNDLFME-ALAVFSDMREEGWPV-DEAVMVSVVAAC 279
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ ++ H +V++G V+ L++ YS S D+ AR+LFD + SW
Sbjct: 280 AKSGVIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYS-SCQDVVAARRLFDNGESLDHFSW 338
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+MISGY + G +++A +LFD MPD+D +W+++IAGC N S+A++ F M +
Sbjct: 339 NSMISGYLKNGRVEDAKALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMR---AH 395
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
I+P+ VTLV +SA + L+ GK++H Y+ + ++ + +LIDMY KCG ++ A
Sbjct: 396 EIKPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAA 455
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
FD +K WN++I A++G S+ +F EM P+ +TF +L+AC
Sbjct: 456 LEVFDMLEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEME--ATGTAVPNEITFTGVLSAC 513
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
HGGLVE+GR +FKLM Y+I P I HYGC+VDLLGRAG EA ++++ M + PD
Sbjct: 514 RHGGLVEEGRQFFKLMQNKYQIVPNIRHYGCMVDLLGRAGYVREAEDMIQSMPMSPDVPA 573
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL C +G ++ E KKL+++DP++ G+ ML+NIY G W V+ +R +K
Sbjct: 574 WGALLGACWKHGDSEVGERVGKKLVKLDPDHDGFQTMLSNIYASEGMWQCVKDLRGSMKQ 633
Query: 485 RNAYKTPGCSWIE 497
++ K GCS +E
Sbjct: 634 QHVAKVAGCSMVE 646
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 207/486 (42%), Gaps = 80/486 (16%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT------LKLSNLTYARFIFDH 71
A L RC HL Q+ + G + A +L+ F T L L ++ +F
Sbjct: 9 AQLSRCCSARHLLQIHAQFLASGLLADAYAASRLLLFTTSATAARLLPHPLHHSLQLFGL 68
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ +PN + ++ A Q F LY M P+ + +P + +C + R
Sbjct: 69 VRSPNAFTCNTLLKAALRQ-GFPHLCFPLYASM----PAAPDTYTHPLLAAACAARGDVR 123
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
VH+ VK GF + AL++ YS G + AR++FD + VSW +++ Y
Sbjct: 124 EGLQVHSHSVKHGFSDNLYLRNALMHMYSACGC-VASARRVFDAGPVWDAVSWNTILATY 182
Query: 192 TRVGDIKNAASLFDSMPDR-------------------------------DVPAWNSVIA 220
R GD++ A +F MP+R D W ++++
Sbjct: 183 VRDGDVEQAVKVFTRMPERSAAAVSAMVALFARRGMVEEARGVFDGAEHRDAFTWTAMVS 242
Query: 221 GCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG 280
+N LF +A++ F M E ++ +V ++A +G++Q G+V HG V R G
Sbjct: 243 CFERNDLFMEALAVFSDMREE---GWPVDEAVMVSVVAACAKSGVIQNGEVCHGLVVRAG 299
Query: 281 LDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFE 340
L + N LI MY C + ARR FD SWNSMI+ + +G+ E++ +F+
Sbjct: 300 LGSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVEDAKALFD 359
Query: 341 EM------------------------------MRCQDHNIRPDGVTFISLLNACTHGGLV 370
M MR H I+PD VT +S+++AC++ +
Sbjct: 360 VMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRA--HEIKPDDVTLVSVISACSNLSAL 417
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
EQG+ + + K Y+ I L+D+ + G E ALEV ++ E W +++
Sbjct: 418 EQGKLVHEYIRK-YQYNITIVLGTSLIDMYMKCGCMEAALEVFDMLE-EKGTPCWNAVIV 475
Query: 431 GCKIYG 436
G + G
Sbjct: 476 GLAMNG 481
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 262/466 (56%), Gaps = 13/466 (2%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD L + +T++ + Y + ++R+M G +PN +L +C
Sbjct: 218 ARRVFDDLVVRDVVSWTSLSSCYV-KCGFPRKGMDVFREMGWSGV-KPNPMTVSSILPAC 275
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
++ + + K +H V+ G V +ALV+ Y++ + + AR +FD M R+VVSW
Sbjct: 276 AELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLS-VREARMVFDLMPHRDVVSW 334
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPA----WNSVIAGCTQNGLFSDAISFFRRMGM 240
+++ Y + + + SLF M V A WN+VI GC +NG +A+ FR+M
Sbjct: 335 NGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQ- 393
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+PN++T+ L A + L++GK IH YV+R+ D + AL+ MY KCG
Sbjct: 394 --KMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGD 451
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
L +R FD +K + +WN+MI + A+HG + ++ +F++M+ + ++P+ VTF +
Sbjct: 452 LNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSR---VQPNSVTFTGV 508
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+ C+H LVE+G F M + + +EP HY C+VD+ RAGR EA + ++GM +EP
Sbjct: 509 LSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEP 568
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
WG+LL C++Y + A+ + KKL EI+PNN G + L NI W E +VR
Sbjct: 569 TASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRI 628
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
++K+R KTPGCSW++V +VH F DK++ +++IY+ L+ +V
Sbjct: 629 LMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELV 674
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 150/335 (44%), Gaps = 41/335 (12%)
Query: 48 AFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRR 107
+L+R L + + AR +FD++ P+ + +I+A + ++ A +Y + R
Sbjct: 101 GLRLIRV-ALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTH-GLSNEAIKIYSSLQER 158
Query: 108 GQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIG 167
G +P+ ++ K+C ++ K VH + G
Sbjct: 159 GI-KPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGV---------------------- 195
Query: 168 IARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGL 227
MSD V A+I Y + ++ A +FD + RDV +W S+ + + G
Sbjct: 196 --------MSD--VFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGF 245
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
+ FR MG ++PN +T+ L A L+ GK IHG+ R+G+ ++ F+
Sbjct: 246 PRKGMDVFREMGWS---GVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFV 302
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
+AL+ +Y KC S++EAR FD + + SWN ++ ++ + + E +F +M R
Sbjct: 303 CSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSR--- 359
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK 382
+R D T+ +++ C G E+ F+ M K
Sbjct: 360 DGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK 394
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 235/391 (60%), Gaps = 11/391 (2%)
Query: 140 IVKSGFEQYPVVETALVN----SYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+ ++ F++ P + L N +Y G ++ ARK+FD MS R++VSW MI GY G
Sbjct: 103 LARAAFDEAPRRDVFLCNVMLAAYVARG-EVAEARKVFDGMSGRDLVSWNTMIHGYAVRG 161
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
D+ A +FD DRD +W+S+I+ + +A+ +R M + + P+ +++V
Sbjct: 162 DVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVA---GVAPDCISMVS 218
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
LSA G L +G +H +V N +++D + AL+DMY KCG ++ + + F K
Sbjct: 219 VLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKD 278
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
+ +W+SMI A HG +++ +F EM+ ++P+ +TFI +L ACTH GLV G+
Sbjct: 279 VLTWSSMIIGLANHGLGHDALSLFSEMI---SQGLQPNEITFIGVLIACTHVGLVNDGKK 335
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
YF M+ + + P++EHYGC+VDLLGRAG EEA+E+++ M +PD ++W +LL C+I+
Sbjct: 336 YFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIH 395
Query: 436 GRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW 495
+ AE A+ KL +DP G+ ++L+NIY + W+ V ++RK ++ N + PG S
Sbjct: 396 KNVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEMRKTIRRENIQRVPGRSS 455
Query: 496 IEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
IE + VH+F S D++HPR EEIY LE M+
Sbjct: 456 IEWENTVHEFVSGDRSHPRIEEIYKMLEEMM 486
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 150/367 (40%), Gaps = 91/367 (24%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
++ AR IFD + + +++MI+AYA + A L+R+M R P+ V
Sbjct: 162 DVGMAREIFDGTRDRDAFSWSSMISAYAKGRC-SKEALELWREM-RVAGVAPDCISMVSV 219
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
L +C + VH + + E + TALV+ Y++ G DI + K+F M ++
Sbjct: 220 LSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCG-DIENSLKVFHAMPVKD 278
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
V++W++MI G +GL DA+S F M
Sbjct: 279 VLTWSSMI-------------------------------IGLANHGLGHDALSLFSEM-- 305
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKV-------IHGYVYRNGLDLDSFISNALID 293
+S ++PN++T + L A H G++ GK +HG V R ++ + ++D
Sbjct: 306 -ISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPR----MEHY--GCMVD 358
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
+ G+ G ++EA E++R +PD
Sbjct: 359 LLGRAGHVEEAM-----------------------------------ELIRSM--TFKPD 381
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE-HYGCLVDLLGRAGRFEEALEV 412
+ + +LL AC VE + M K ++P + HY L ++ +A +E E+
Sbjct: 382 PIIWRTLLGACRIHKNVEIAE---EAMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEM 438
Query: 413 VKGMKIE 419
K ++ E
Sbjct: 439 RKTIRRE 445
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 158/420 (37%), Positives = 234/420 (55%), Gaps = 42/420 (10%)
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
P Y +L+SC + K +H Q+ +GF V+ T LVN Y + + AR
Sbjct: 73 PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVC-DSLSSARL 131
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
LFD + N+ W +I GY G + A L+ M D GL D
Sbjct: 132 LFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDY---------------GLVPDN 176
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
+F P + ALSAI H G+ IH +V + G + D F+ AL
Sbjct: 177 FTF-------------PFVLKACAALSAIEH------GREIHEHVVQTGWEKDVFVGAAL 217
Query: 292 IDMYGKCGSLKEARRAFDR---NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDH 348
IDMY KCG + AR FD+ + SWN+MI +A+HG + ++ +FEEM R
Sbjct: 218 IDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVA-- 275
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
+PD +TF+ +L+AC+HGGL+E+G +F+ M + Y+I+P ++HY C+VDLLG +GR +E
Sbjct: 276 --KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDE 333
Query: 409 ALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGE 468
A ++ MK+ PD VWG+LLN CKI+ + E A+++LIE++P++ G ++L+NIY +
Sbjct: 334 AYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQ 393
Query: 469 LGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
GKW+ V K+RK++ DR K+ CSWIEV +VH F S D +HP ++EIY LE + L
Sbjct: 394 AGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGL 453
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYA 88
KQL + + G A KLV +C +L+ AR +FD + N +L+ +I YA
Sbjct: 95 KQLHAQVCLAGFGFDTVIATKLVNLYCVC--DSLSSARLLFDRIPKHNIFLWNVLIRGYA 152
Query: 89 SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQY 148
+ +A LY M G P+ F +P VLK+C + + +H +V++G+E+
Sbjct: 153 WNGPY-EAAVQLYYQMFDYGL-VPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKD 210
Query: 149 PVVETALVNSYSRSGNDIGIARKLFDEMSDRN---VVSWTAMISGYTRVGDIKNAASLFD 205
V AL++ Y++ G +G AR++FD++ R+ VVSW AMI+GY G A LF+
Sbjct: 211 VFVGAALIDMYAKCGC-VGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFE 269
Query: 206 SMPDRDVP---AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGH 262
M P + V++ C+ GL + FF M + I P C + +GH
Sbjct: 270 EMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDY--KIDPTVQHYTCMVDLLGH 327
Query: 263 TGML 266
+G L
Sbjct: 328 SGRL 331
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 170/487 (34%), Positives = 250/487 (51%), Gaps = 49/487 (10%)
Query: 39 LGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAF 98
LG + N Y ++ +L AR +F L + +TAMI A Q A
Sbjct: 569 LGNALINMY---------IRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQ-GEDMKAI 618
Query: 99 SLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNS 158
L+ M G +P + + +LK C K V I+ SG+E
Sbjct: 619 ELFWQMQNEGF-RPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYEL----------- 666
Query: 159 YSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSV 218
D G+ A+IS Y++ G + +A +FD MP RD+ +WN +
Sbjct: 667 ------DTGVG---------------NALISAYSKSGSMTDAREVFDKMPSRDIVSWNKI 705
Query: 219 IAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR 278
IAG QNGL A+ F +M + ++ PN+ + V L+A L+ GK +H + +
Sbjct: 706 IAGYAQNGLGQTAVEFAYQMQEQ---DVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVK 762
Query: 279 NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICV 338
L D + ALI MY KCGS EA+ FD +K + +WN+MIN++A HG + ++
Sbjct: 763 RKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGF 822
Query: 339 FEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVD 398
F M + I+PDG TF S+L+AC H GLV +G F M Y + P IEHYGCLV
Sbjct: 823 FNCM---EKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVG 879
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGY 458
LLGRA RF+EA ++ M PD VW +LL C+I+G AE A ++++ N
Sbjct: 880 LLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAV 939
Query: 459 GIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
I+L+N+Y G+WD+V K+R++++ R K PG SWIEVD +H+F + D++HP T EI
Sbjct: 940 YILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEI 999
Query: 519 YDALESM 525
Y L+ +
Sbjct: 1000 YAELKRL 1006
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 186/386 (48%), Gaps = 43/386 (11%)
Query: 51 LVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP 110
LV C ++ ++ A+ F + +Y A+I A A Q H AF Y M R
Sbjct: 270 LVTMC-VRCGDVDSAKQAFKGTADRDVVVYNALIAALA-QHGHNVEAFEQYYRM-RSDGV 326
Query: 111 QPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIAR 170
N+ Y +L +C K++H+ I + G +D+ I
Sbjct: 327 ALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHS-----------------SDVQIG- 368
Query: 171 KLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSD 230
A+IS Y R GD+ A LF +MP RD+ +WN++IAG + +
Sbjct: 369 --------------NALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGE 414
Query: 231 AISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNA 290
A+ +++M S+ ++P +VT + LSA ++ GK+IH + R+G+ + ++NA
Sbjct: 415 AMRLYKQMQ---SEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANA 471
Query: 291 LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
L++MY +CGSL EA+ F+ + + SWNSMI A HG E + +F+EM Q+ +
Sbjct: 472 LMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEM---QNEEL 528
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
PD +TF S+L+ C + +E G+ +T++ ++ + L+++ R G ++A
Sbjct: 529 EPDNITFASVLSGCKNPEALELGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDAR 587
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYG 436
V ++ D + W +++ GC G
Sbjct: 588 NVFHSLQ-HRDVMSWTAMIGGCADQG 612
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 211/478 (44%), Gaps = 57/478 (11%)
Query: 17 LAILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
L+IL C+ L K + S ++ G S L+ + +L AR +F +
Sbjct: 334 LSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA-RCGDLPKARELFYTMP 392
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
+ + A+I YA + A LY+ M G +P + + H+L +C +
Sbjct: 393 KRDLISWNAIIAGYARREDRGE-AMRLYKQMQSEG-VKPGRVTFLHLLSACANSSAYADG 450
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
KM+H I++SG + + AL+N Y R G+
Sbjct: 451 KMIHEDILRSGIKSNGHLANALMNMYRRCGS----------------------------- 481
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
+ A ++F+ RDV +WNS+IAG Q+G + A F+ M E + P+ +T
Sbjct: 482 ---LMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNE---ELEPDNITF 535
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
LS + L+LGK IHG + +GL LD + NALI+MY +CGSL++AR F
Sbjct: 536 ASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQH 595
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ + SW +MI A G+ +I +F +M Q+ RP TF S+L CT +++G
Sbjct: 596 RDVMSWTAMIGGCADQGEDMKAIELFWQM---QNEGFRPVKSTFSSILKVCTSSACLDEG 652
Query: 374 RAYFK-LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
+ ++ Y ++ + + L+ ++G +A EV M D V W ++ G
Sbjct: 653 KKVIAYILNSGYELDTGVGN--ALISAYSKSGSMTDAREVFDKMP-SRDIVSWNKIIAG- 708
Query: 433 KIYGRTDFAEFAVK---KLIEID--PNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
Y + + AV+ ++ E D PN + + L N +E ++V + R
Sbjct: 709 --YAQNGLGQTAVEFAYQMQEQDVVPNKFSF-VSLLNACSSFSALEEGKRVHAEIVKR 763
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 192/422 (45%), Gaps = 52/422 (12%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K +L AR +F ++ + Y M+ YA Q A+ L+ M G P++ Y
Sbjct: 175 KCGDLPRARQVFAGISPRDVVSYNTMLGLYA-QKAYVKECLGLFGQMSSEG-ISPDKVTY 232
Query: 118 PHVLK--SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
++L + P +L+ K +H V+ G +NS R G
Sbjct: 233 INLLDAFTTPSMLDE--GKRIHKLTVEEG-----------LNSDIRVG------------ 267
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
TA+++ R GD+ +A F DRDV +N++IA Q+G +A +
Sbjct: 268 ---------TALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQY 318
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
RM SD + N+ T + L+A + L+ GK+IH ++ +G D I NALI MY
Sbjct: 319 YRM---RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMY 375
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
+CG L +AR F K+ L SWN++I +A ++ ++++M Q ++P V
Sbjct: 376 ARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQM---QSEGVKPGRV 432
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF+ LL+AC + G+ + + ++ I+ L+++ R G EA V +G
Sbjct: 433 TFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEG 491
Query: 416 MKIEPDEVVWGSLLNGCKIYG--RTDFAEFAVKKLIEIDPNNGGYGIMLANIYG----EL 469
+ D + W S++ G +G T + F + E++P+N + +L+ EL
Sbjct: 492 TQAR-DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALEL 550
Query: 470 GK 471
GK
Sbjct: 551 GK 552
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 198/435 (45%), Gaps = 48/435 (11%)
Query: 2 VSVTNQLNQTLNQQV--LAILERCNHINHLKQLQSFLTTLGQSQT--NFYAFKLVRFCTL 57
VS T+Q T ++ +A+L+ C L + + + ++ + + L+ +
Sbjct: 14 VSNTHQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYV 73
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K ++ A +F + + + ++I+ YA Q AF L+ +M G PN+ Y
Sbjct: 74 KCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQ-GFKKKAFQLFEEMQNAGFI-PNKITY 131
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+L +C E K +H+QI+K+G+++ P V+ +L
Sbjct: 132 ISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSL---------------------- 169
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+S Y + GD+ A +F + RDV ++N+++ Q + + F +
Sbjct: 170 ----------LSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQ 219
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M S+ I P++VT + L A ML GK IH GL+ D + AL+ M +
Sbjct: 220 MS---SEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVR 276
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG + A++AF + + + +N++I + A HG +++ FE+ R + + + T+
Sbjct: 277 CGDVDSAKQAFKGTADRDVVVYNALIAALAQHG---HNVEAFEQYYRMRSDGVALNRTTY 333
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKT-YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+S+LNAC+ +E G+ +++ + + QI + L+ + R G +A E+ M
Sbjct: 334 LSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGN--ALISMYARCGDLPKARELFYTM 391
Query: 417 KIEPDEVVWGSLLNG 431
+ D + W +++ G
Sbjct: 392 P-KRDLISWNAIIAG 405
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 124/250 (49%), Gaps = 8/250 (3%)
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
+I+ Y + + +A +F MP RDV +WNS+I+ Q G A F M +
Sbjct: 68 LINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ---NAGF 124
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
PN++T + L+A L+ GK IH + + G D + N+L+ MYGKCG L AR+
Sbjct: 125 IPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQ 184
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F S + + S+N+M+ +A + + +F +M I PD VT+I+LL+A T
Sbjct: 185 VFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQM---SSEGISPDKVTYINLLDAFTT 241
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
++++G+ KL T + I LV + R G + A + KG + D VV+
Sbjct: 242 PSMLDEGKRIHKL-TVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTA-DRDVVVYN 299
Query: 427 SLLNGCKIYG 436
+L+ +G
Sbjct: 300 ALIAALAQHG 309
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 15/242 (6%)
Query: 247 RPNQ---VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
RP + T V L +L K IH + + D F+SN LI+MY KC S+ +
Sbjct: 21 RPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLD 80
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A + F ++ + SWNS+I+ +A G + + +FEEM Q+ P+ +T+IS+L A
Sbjct: 81 AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEM---QNAGFIPNKITYISILTA 137
Query: 364 CTHGGLVEQGRA-YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
C +E G+ + +++ Y+ +P++++ L+ + G+ G A +V G I P +
Sbjct: 138 CYSPAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAG--ISPRD 193
Query: 423 VVWGSLLNGC---KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVR 479
VV + + G K Y + F I P+ Y I L + + DE +++
Sbjct: 194 VVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTY-INLLDAFTTPSMLDEGKRIH 252
Query: 480 KM 481
K+
Sbjct: 253 KL 254
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 178/515 (34%), Positives = 273/515 (53%), Gaps = 63/515 (12%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV---- 120
AR +FD + N +T+M+ Y Q A L+ +M RR I +
Sbjct: 102 ARKVFDVMPERNVVSWTSMVRGYV-QEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESR 160
Query: 121 ---LKSCPDVLESRGTKMVHTQI-----------VKSGFEQYPV----VETALVNSYSRS 162
K D++ + +V I + F++ V T +V+ Y+++
Sbjct: 161 IDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKN 220
Query: 163 GNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMP-------------- 208
G + +ARKLF+ M +RN VSWTAM+ GYT+ G +K A LF++MP
Sbjct: 221 GR-VDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQF 279
Query: 209 -----------------DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
+RD WN++I + GL +A+ F RM E + N
Sbjct: 280 GLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQRE---GVALNFP 336
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
+++ LS L G+ +H + R+ D D ++++ LI MY KCG L A+ F+R
Sbjct: 337 SMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRF 396
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K + WNSMI ++ HG E ++ VF +M C ++PD VTFI +L+AC++ G V+
Sbjct: 397 LFKDVVMWNSMITGYSQHGLGEEALNVFHDM--CSS-GVQPDEVTFIGVLSACSYSGKVK 453
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G F+ M TY++EP IEHY C+VDLLGRAGR +EA+E+V+ M +EPD +VWG+LL
Sbjct: 454 EGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGA 513
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C+ + + D AE AV+KL +++P N G ++L+++Y G+W +V +RK + +R K P
Sbjct: 514 CRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKI-NRRVIKFP 572
Query: 492 GCSWIEVDKQVHQFHSLD-KTHPRTEEIYDALESM 525
GCSWIEV+K+VH F D K+HP I LE +
Sbjct: 573 GCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKL 607
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 32/286 (11%)
Query: 154 ALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVP 213
A+V++Y S A LFD+M RN VS+ MISGY + G + +A +FD MP+R+V
Sbjct: 57 AMVSAYFESHKPRD-ALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVV 115
Query: 214 AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH 273
+W S++ G Q G+ +A F M R N V+ + + + K +
Sbjct: 116 SWTSMVRGYVQEGMVEEAEKLFWEMP-------RRNVVSWTVMIGGLLKESRIDDAKKLF 168
Query: 274 GYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSE 333
+ D + +I Y + G L EAR FD + + +W +M++ +A +G+ +
Sbjct: 169 DMIPEK----DVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVD 224
Query: 334 NSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
+ +FE M + V++ ++L T G +++ F+ M + +
Sbjct: 225 VARKLFEVMPERNE-------VSWTAMLMGYTQSGRMKEAFELFEAMPVKWIV------- 270
Query: 394 GC--LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
C ++ G AG A + +GMK E DE W +++ K++ R
Sbjct: 271 ACNEMILQFGLAGEMHRARMMFEGMK-ERDEGTWNAMI---KVFER 312
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 128/281 (45%), Gaps = 67/281 (23%)
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDS--MPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
R++ S T+ IS Y R+GDI NA +FD+ +P R + +WN++++ ++ DA+ F
Sbjct: 17 RSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFD 76
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+M P + T+ SF N +I Y
Sbjct: 77 QM---------PQRNTV-------------------------------SF--NGMISGYV 94
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
K G + +AR+ FD ++ + SW SM+ + G E + +F EM R N+ V+
Sbjct: 95 KNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPR---RNV----VS 147
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG---RAGRFEEALEVV 413
+ ++ GGL+++ R K + + P+ + + +++G + GR +EA E+
Sbjct: 148 WTVMI-----GGLLKESR--IDDAKKLFDMIPE-KDVVVVTNMIGGYCQVGRLDEARELF 199
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPN 454
MK+ + W ++++G GR D A +KL E+ P
Sbjct: 200 DEMKVR-NVFTWTTMVSGYAKNGRVDVA----RKLFEVMPE 235
>gi|334187520|ref|NP_001190262.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
gi|223635618|sp|P0C8Q7.1|PP369_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08305
gi|332003897|gb|AED91280.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
Length = 534
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 173/505 (34%), Positives = 280/505 (55%), Gaps = 12/505 (2%)
Query: 22 RCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHLTTPNTYLY 80
+C ++ L ++ + L TLG S+ + + + F L S ++ YA L+ P Y +
Sbjct: 17 QCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGW 76
Query: 81 TAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQI 140
+I + S + + S+Y M+R G P+ YP ++KS + + +H +
Sbjct: 77 NFVIRGF-SNSRNPEKSISVYIQMLRFGL-LPDHMTYPFLMKSSSRLSNRKLGGSLHCSV 134
Query: 141 VKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
VKSG E + L++ Y S D ARKLFDEM +N+V+W +++ Y + GD+ +A
Sbjct: 135 VKSGLEWDLFICNTLIHMYG-SFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSA 193
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
+FD M +RDV W+S+I G + G ++ A+ F +M M + + + N+VT+V + A
Sbjct: 194 RLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQM-MRMGSS-KANEVTMVSVICAC 251
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS-- 318
H G L GK +H Y+ L L + +LIDMY KCGS+ +A F R S K +
Sbjct: 252 AHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALM 311
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
WN++I A HG S+ +F +M ++ I PD +TF+ LL AC+HGGLV++ +FK
Sbjct: 312 WNAIIGGLASHGFIRESLQLFHKM---RESKIDPDEITFLCLLAACSHGGLVKEAWHFFK 368
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
+ K EP+ EHY C+VD+L RAG ++A + + M I+P + G+LLNGC +G
Sbjct: 369 SL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNL 427
Query: 439 DFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV 498
+ AE KKLIE+ P+N G + LAN+Y ++ R +R+ ++ + K G S +++
Sbjct: 428 ELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDL 487
Query: 499 DKQVHQFHSLDKTHPRTEEIYDALE 523
D H+F + DKTH +++IY L+
Sbjct: 488 DGTRHRFIAHDKTHFHSDKIYAVLQ 512
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 277/540 (51%), Gaps = 83/540 (15%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
LS + +AR +FD + +P+T L+ ++ + S A + MV G +P+
Sbjct: 162 LSRVDHARKVFDTVPSPDTVLWNTLLAGLS-----GSEAVESFARMVCDGSVRPDATTLA 216
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVET------------------------- 153
VL + +V + + VH+ K G ++ V T
Sbjct: 217 SVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKP 276
Query: 154 ------ALVNSYSRSGNDIGIARKLFDEMSD----RNVVSWTAMI--------------- 188
AL++ YS +G +G + LF E+ N + A+I
Sbjct: 277 DLVAYNALISGYSVNGM-VGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCL 335
Query: 189 ------SGYT--------------RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
SG+T R+ D+++A FD+MP++ + +WN++I+G QNGL
Sbjct: 336 HGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLT 395
Query: 229 SDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS 288
A++ F +M V N+RPN +T+ LSA G L LGK +H + L+ + ++
Sbjct: 396 EMAVALFEQM---VKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVM 452
Query: 289 NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDH 348
ALIDMY KCGS+ EARR F+ K + SWN+MI + LHGQ ++ ++++M+ D
Sbjct: 453 TALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDML---DA 509
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
++ P TF+S+L AC+HGGLVE+G F+ MT Y I P IEH C+VDLLGRAG+ +E
Sbjct: 510 HLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKE 569
Query: 409 ALEVVKGM-KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYG 467
A E++ K VWG+LL C ++ +D A+ A +KL E+DP N GY ++L+N++
Sbjct: 570 AFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHT 629
Query: 468 ELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
++ E VR+ K R KTPG + IE+ + H F + D+ HP++E IY LE + A
Sbjct: 630 SKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTA 689
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 149/341 (43%), Gaps = 53/341 (15%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+A+ Y + + +A +FD++P D WN+++AG + S+A+ F RM + S
Sbjct: 153 SALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSG----SEAVESFARMVCDGS- 207
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+RP+ TL L A + +G+ +H + + GL + LI +Y KCG ++ A
Sbjct: 208 -VRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESA 266
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS----- 359
R FD K L ++N++I+ ++++G +S+ +F E+M + P+ T ++
Sbjct: 267 RCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTL---GLWPNSSTLVALIPVH 323
Query: 360 ------LLNACTHGGLVEQG------------------------RAYFKLMTKTYRIEPQ 389
LL C HG +++ G R F M E
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMP-----EKT 378
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGM---KIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
+E + ++ + G E A+ + + M + P+ + S L+ C G ++ +
Sbjct: 379 MESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHR 438
Query: 447 KLIEIDPNNGGYGIM-LANIYGELGKWDEVRKVRKMLKDRN 486
+ E D Y + L ++Y + G E R++ + ++N
Sbjct: 439 IITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKN 479
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Query: 284 DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
D+F+++AL +Y + AR+ FD WN+++ + ++ F M+
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLS----GSEAVESFARMV 203
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
C D ++RPD T S+L A V GR K E + G L+ L +
Sbjct: 204 -C-DGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTG-LISLYSKC 260
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
G E A + M+ +PD V + +L++G + G
Sbjct: 261 GDVESARCLFDMME-KPDLVAYNALISGYSVNG 292
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 166/517 (32%), Positives = 272/517 (52%), Gaps = 44/517 (8%)
Query: 13 NQQVLAILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
V L+ C+ + L + +Q++ G F L+ ++ A+ +F
Sbjct: 119 QHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYA-SCRDVAAAQLLF 177
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
D + ++ A+ITAY + +++ M+ G ++ V+ +C + +
Sbjct: 178 DAVEENGVVMWNAIITAYMKN-GNWMEVVEMFKGMLEVGVAF-DEITLVSVVTACGRIGD 235
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
++ K V + + G + + TAL++ Y++ G ++G AR+LFD M R+VV+W+AMIS
Sbjct: 236 AKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCG-ELGKARRLFDGMQSRDVVAWSAMIS 294
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GYT+ + A +LF M +V PN
Sbjct: 295 GYTQADQCREALALFSEMQLAEV----------------------------------EPN 320
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
VT+V LSA G L+ GK +H Y+ R L L + AL+D Y KCG + +A AF+
Sbjct: 321 DVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFE 380
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
K +W ++I A +G+ ++ +F M + +I P VTFI +L AC+H L
Sbjct: 381 SMPVKNSWTWTALIKGMATNGRGREALELFSSMRKA---SIEPTDVTFIGVLMACSHSCL 437
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
VE+GR +F MT+ Y I+P+ EHYGC+VDLLGRAG +EA + ++ M IEP+ V+W +LL
Sbjct: 438 VEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALL 497
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
+ C ++ + E A+K+++ ++P++ G I+L+NIY +G+W +RK +KDR K
Sbjct: 498 SSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEK 557
Query: 490 TPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
TPGCS IE+D V +F + D HP+ +EIY +E M+
Sbjct: 558 TPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMI 594
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 194/442 (43%), Gaps = 47/442 (10%)
Query: 28 HLKQLQSFLTTLGQSQTNFYAF-KLVRFCTLKLSNLTYARFIFDHLTTP--NTYLYTAMI 84
+L QL + L G+ + F L+ + L YA +F P +T Y ++
Sbjct: 31 YLPQLHAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLM 90
Query: 85 TAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG 144
A H A L+ +M+ P+Q LKSC + + + VK G
Sbjct: 91 RALL-HAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRG 149
Query: 145 FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLF 204
V ++L++ Y+ S D+ A+ LFD + + VV W A+I+ Y + G+ +F
Sbjct: 150 LMADRFVLSSLIHMYA-SCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMF 208
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
G+ ++F +++TLV ++A G G
Sbjct: 209 --------------------KGMLEVGVAF--------------DEITLVSVVTACGRIG 234
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
+LGK + YV GL + + ALIDMY KCG L +ARR FD + + +W++MI+
Sbjct: 235 DAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMIS 294
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTY 384
+ Q ++ +F EM Q + P+ VT +S+L+AC G +E G+ + +
Sbjct: 295 GYTQADQCREALALFSEM---QLAEVEPNDVTMVSVLSACAVLGALETGK-WVHSYIRRK 350
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI--YGRTDFAE 442
R+ I LVD + G ++A+E + M ++ + W +L+ G GR
Sbjct: 351 RLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK-NSWTWTALIKGMATNGRGREALEL 409
Query: 443 FAVKKLIEIDPNNGGY-GIMLA 463
F+ + I+P + + G+++A
Sbjct: 410 FSSMRKASIEPTDVTFIGVLMA 431
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/512 (31%), Positives = 274/512 (53%), Gaps = 42/512 (8%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFDHLTT 74
L++L +C + LKQLQ+F K + FC+L +++ +A +FD +
Sbjct: 24 LSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQ 83
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
P+ L+ M YA AF+L+ ++ G P+ + +P +LK+C +
Sbjct: 84 PDIVLFNTMARGYARTDT-PLRAFTLFTQILFSGL-FPDDYTFPSLLKACASCKALEEGR 141
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
+H +K G + V L+N Y+ + N++ AR++
Sbjct: 142 QLHCLAIKLGLSENVYVCPTLINMYT-ACNEMDCARRV---------------------- 178
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
FD + + V +N++I G + ++A+S FR + + N++P VT++
Sbjct: 179 ---------FDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQ---ARNLKPTDVTML 226
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
LS+ G L LGK +H YV +NG + + ALIDMY KCGSL +A F+ + +
Sbjct: 227 SVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVR 286
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+W++MI ++A+HG ++ +F+EM + PD +TF+ LL AC+H GLVE+G
Sbjct: 287 DTQAWSAMIMAYAIHGHGLKAVSLFKEMRKA---GTEPDEITFLGLLYACSHTGLVEEGF 343
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
YF M Y + P I+HYGC+VDLLGRAGR EEA E + G+ I P ++W +LL+ C
Sbjct: 344 EYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGS 403
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
+G + + ++++ E+D ++GG I+L+N+ G+W++V VRK++ +R K PGCS
Sbjct: 404 HGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCS 463
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+EV+ VH+F S D H + +++ AL+ +V
Sbjct: 464 SVEVNNVVHEFFSGDGVHSVSTKLHQALDELV 495
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 157/461 (34%), Positives = 246/461 (53%), Gaps = 40/461 (8%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD L PN + +MI Y H A L+R M ++G QP++ + +L +C
Sbjct: 416 ARTVFDQLELPNLISWNSMIGIYVQCERH-DDALQLFRTMQQQG-IQPDRVNFMTILGAC 473
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
R K+VH + +SG P+V+T+LVN Y+++
Sbjct: 474 TIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKA---------------------- 511
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
G++ A + M ++ + AWN +I G +G +A+ ++++ +E
Sbjct: 512 ----------GELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEA-- 559
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
I ++VT + L+A + L GK+IH GLD D + NAL +MY KCGS++ A
Sbjct: 560 -IPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENA 618
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
RR FD + SWN M+ ++A HG+SE + + +M + ++ +G+TF+S+L++C
Sbjct: 619 RRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKM---EQEGVKLNGITFVSVLSSC 675
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GL+ +G YF + IE + EHYGCLVDLLGRAG+ +EA + + M +EP V
Sbjct: 676 SHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVT 735
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
W SLL C++ D + A KL+E+DP N ++L+NIY E G W K+R+ +
Sbjct: 736 WASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMAS 795
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
R K PG S I+V +VH+F D +HPR EIYD +E +
Sbjct: 796 RRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEEL 836
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 181/368 (49%), Gaps = 41/368 (11%)
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
F + N + MI+AY+S + A +L+ M+ G PN VL SC
Sbjct: 15 FGKIRARNVVSWNVMISAYSSYKSF-QEALALFHAMLLEGVA-PNAITLVAVLNSCGSFR 72
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
E R +VH ++ GF Q +V TAL+N Y + G + A+ +F+EM+++NVV+W AM+
Sbjct: 73 ELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLD-AQSVFEEMAEKNVVTWNAML 131
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
Y+ + GC + A+ F RM +E ++
Sbjct: 132 GVYS--------------------------LQGCC----WKLAVELFTRMLLE---GVKA 158
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
N +T + L+++ L+ GK IH V + LD F++ AL++ Y KCGSL +AR+ F
Sbjct: 159 NVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVF 218
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
D + + +WNSMI+++++ +S + +F+ M Q R D VTF+S+L+AC +
Sbjct: 219 DGMPCRSVGTWNSMISAYSISERSGEAFFIFQRM---QQEGERCDRVTFLSILDACVNPE 275
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
++ G+ + +++T E + L+ + R E+A +V MK + + + W ++
Sbjct: 276 TLQHGKHVRESISET-SFELDLFVGTALITMYARCRSPEDAAQVFGRMK-QTNLITWSAI 333
Query: 429 LNGCKIYG 436
+ +G
Sbjct: 334 ITAFADHG 341
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 131/503 (26%), Positives = 210/503 (41%), Gaps = 93/503 (18%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL----KLSNLTYARFIFDH 71
++A+L C L+ L + F+ LV L K L A+ +F+
Sbjct: 61 LVAVLNSCGSFRELRD--GILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEE 118
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ N + AM+ Y+ Q A L+ M+ G + N + +VL S D R
Sbjct: 119 MAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEG-VKANVITFLNVLNSVVDPDALR 177
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
K +H+ + +S V TALVN+Y
Sbjct: 178 KGKFIHSCVRESEHSLDVFVNTALVNTY-------------------------------- 205
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
T+ G + +A +FD MP R V WNS+I+ + + +A F+RM E R ++V
Sbjct: 206 TKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQE---GERCDRV 262
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
T + L A + LQ GK + + +LD F+ ALI MY +C S ++A + F R
Sbjct: 263 TFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRM 322
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA-CTHGGLV 370
+ L +W+++I +FA HG ++ F M Q I P+ VTFISLLN T GL
Sbjct: 323 KQTNLITWSAIITAFADHGHCGEALRYFRMM---QQEGILPNRVTFISLLNGFTTPSGLE 379
Query: 371 EQGRAYFKLM------TKTYR----------------------IE-PQIEHYGCLVDLLG 401
E R + + T T R +E P + + ++ +
Sbjct: 380 ELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYV 439
Query: 402 RAGRFEEALEVVKGMK---IEPDEVVWGSLLNGCKI--YGRTDFAEFAVKKLIEIDPNNG 456
+ R ++AL++ + M+ I+PD V + ++L C I +GRT +KL+
Sbjct: 440 QCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRT-------RKLVHQCVEES 492
Query: 457 GYG------IMLANIYGELGKWD 473
G G L N+Y + G+ D
Sbjct: 493 GLGGSPLVQTSLVNMYAKAGELD 515
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 204/476 (42%), Gaps = 88/476 (18%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K +LT AR +FD + + + +MI+AY S + AF +++ M + G+ + ++ +
Sbjct: 207 KCGSLTDARKVFDGMPCRSVGTWNSMISAY-SISERSGEAFFIFQRMQQEGE-RCDRVTF 264
Query: 118 PHVLKSC--PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
+L +C P+ L+ K V I ++ FE V TAL
Sbjct: 265 LSILDACVNPETLQH--GKHVRESISETSFELDLFVGTAL-------------------- 302
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
I+ Y R ++AA +F M ++ W+++I +G +A+ +F
Sbjct: 303 ------------ITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYF 350
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
R M E I PN+VT + L+ L+ IH + +GLD + + NAL+++Y
Sbjct: 351 RMMQQE---GILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVY 407
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
G+C S +AR FD+ L SWNSMI + + ++++ +F M Q I+PD V
Sbjct: 408 GRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTM---QQQGIQPDRV 464
Query: 356 TFISLLNACTHGG----------LVEQGRAYFKLMTKTYRI------------------- 386
F+++L ACT G VE+ + +T +
Sbjct: 465 NFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEM 524
Query: 387 -EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP---DEVVWGSLLNGCKIYGRTDFAE 442
E QI + L++ GR EALE + +++E D+V + S+LN C T
Sbjct: 525 DEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNAC-----TSSTS 579
Query: 443 FAVKKLIEIDPNNGGYGI------MLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
A K+I + G L N+Y + G + R++ + R+A G
Sbjct: 580 LAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNG 635
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 138/263 (52%), Gaps = 17/263 (6%)
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y+R G + +A + F + R+V +WN +I+ + F +A++ F M +E + PN
Sbjct: 2 YSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLE---GVAPNA 58
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
+TLV L++ G L+ G ++H G ++ ++ AL++MYGKCG+L +A+ F+
Sbjct: 59 ITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEE 118
Query: 311 NSKKRLTSWNSMINSFALHGQS-ENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
++K + +WN+M+ ++L G + ++ +F M+ ++ + +TF+++LN+
Sbjct: 119 MAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLL---EGVKANVITFLNVLNSVVDPDA 175
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHY--GCLVDLLGRAGRFEEALEVVKGMKIEPDEVV--W 425
+ +G+ + ++ E ++ + LV+ + G +A +V GM P V W
Sbjct: 176 LRKGKFIHSCVRES---EHSLDVFVNTALVNTYTKCGSLTDARKVFDGM---PCRSVGTW 229
Query: 426 GSLLNGCKIYGRTDFAEFAVKKL 448
S+++ I R+ A F +++
Sbjct: 230 NSMISAYSISERSGEAFFIFQRM 252
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 5/136 (3%)
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
MY +CGSL +A AF + + + SWN MI++++ + + ++ +F M+ + P+
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLL---EGVAPN 57
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
+T +++LN+C + G L + + + L+++ G+ G +A V
Sbjct: 58 AITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATA-LLNMYGKCGTLLDAQSVF 116
Query: 414 KGMKIEPDEVVWGSLL 429
+ M E + V W ++L
Sbjct: 117 EEMA-EKNVVTWNAML 131
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/512 (32%), Positives = 270/512 (52%), Gaps = 44/512 (8%)
Query: 11 TLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFD 70
++ ++L + +CN + + K+L + ++ + ++ ++ K L AR +FD
Sbjct: 125 VISNRILDMYIKCNSLVNAKRLFDEM-----AERDLCSWNIMISGYAKAGRLQEARKLFD 179
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+T + + +TAM + Y H A L+R M R + N+F L + +
Sbjct: 180 QMTERDNFSWTAMTSGYVRHDQH-EEALELFRAMQRHENFKCNKFTMSSALAASAAIQSL 238
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
K +H I++ G + VV +AL + Y + G+ IG AR +FD+ DR+VVSWTAMI
Sbjct: 239 HLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGS-IGEARHIFDKTVDRDVVSWTAMIDR 297
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y + G + +LF + + I PN+
Sbjct: 298 YFKEGRREEGFALFSDL----------------------------------LKSGIWPNE 323
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
T L+A +LGK +HGY+ R G D SF ++ L+ MY KCG++K ARR F+
Sbjct: 324 FTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNG 383
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
+ L SW S+I+ +A +GQ + ++ FE +++ +PD +TF+ +L+ACTH GLV
Sbjct: 384 MPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKS---GTQPDHITFVGVLSACTHAGLV 440
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
++G YF + + + + +HY CL+DLL R+GR +EA +++ M IEPD+ +W SLL
Sbjct: 441 DKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLG 500
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
GC+I+G A+ A + L EI+P N LANIY G W V +VRK++ R K
Sbjct: 501 GCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVMDARGVVKK 560
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
PG SWIE+ ++VH F D +H +++EI++ L
Sbjct: 561 PGLSWIEIKREVHVFLVGDTSHAKSKEIHEFL 592
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 174/331 (52%), Gaps = 8/331 (2%)
Query: 111 QPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIAR 170
+P+ Y +L+ C + VH SGF V+ +++ Y + N + A+
Sbjct: 86 RPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKC-NSLVNAK 144
Query: 171 KLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSD 230
+LFDEM++R++ SW MISGY + G ++ A LFD M +RD +W ++ +G ++ +
Sbjct: 145 RLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEE 204
Query: 231 AISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNA 290
A+ FR M+ +N + N+ T+ AL+A L LGK IHG++ R GLDLD + +A
Sbjct: 205 ALELFR--AMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSA 262
Query: 291 LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
L DMYGKCGS+ EAR FD+ + + SW +MI+ + G+ E +F ++++ I
Sbjct: 263 LSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKS---GI 319
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
P+ TF +LNAC E G+ MT+ +P LV + + G + A
Sbjct: 320 WPNEFTFSGVLNACADHAAEELGKQVHGYMTRI-GFDPSSFAASTLVHMYTKCGNIKNAR 378
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
V GM PD V W SL++G G+ D A
Sbjct: 379 RVFNGMP-RPDLVSWTSLISGYAQNGQPDEA 408
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 158/464 (34%), Positives = 257/464 (55%), Gaps = 10/464 (2%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ +FD + NT + MI YA Q + A L + + R G + +C
Sbjct: 371 AKELFDRMPFRNTISWAGMIAGYA-QNGRSEEALDLLQALHRNGMLPSLSSLTS-SFLAC 428
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ + VH+ VK+G + V AL++ Y + N + R++F+ M ++ VSW
Sbjct: 429 SHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRN-MEYVRQVFNRMRVKDTVSW 487
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+ I+ + +++A +FD+M RDV +W ++I+ Q +A+ FF+ M + +
Sbjct: 488 NSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTM---LHE 544
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ +PN L LS G G +LG+ IH ++G+D + ++NAL+ MY KCG ++
Sbjct: 545 HEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGC-ADS 603
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ FD ++ + +WN+ I A HG +I ++E M + + P+ VTF+ LLNAC
Sbjct: 604 HKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHM---ESVGVLPNEVTFVGLLNAC 660
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLV++G +FK M++ Y + P +EHY C+VDLLGR G + A + + M IEPD V+
Sbjct: 661 SHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVI 720
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
W +LL CKI+ + A +KL +P+N G +ML+NIY LG W EV ++RK++K
Sbjct: 721 WSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQ 780
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
R K PGCSW+++ +VH F + DK H + EEI L+ + L
Sbjct: 781 RGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTL 824
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 166/372 (44%), Gaps = 68/372 (18%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F + N +T MI+ Y H + ++R M G P+Q + VL + +
Sbjct: 179 LFKQMPQRNLVTWTVMISGYVRIEQHGK-GWDIFRMMHHEG-ASPDQSNFASVLSAVTGL 236
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW--- 184
+ +++ ++K+GFE V+ T+++N Y+R + + IA K FD M +RN +W
Sbjct: 237 QDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTM 296
Query: 185 ----------------------------TAMISGYTRVGDIKNAASLFDSMPDRDVPAWN 216
TA+++G R G I A LF+ +PD V +WN
Sbjct: 297 IAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWN 356
Query: 217 SVIAGCTQNGLFSDAISFFRRM---------GMEV--SDNIRPNQ-VTLVCAL------- 257
++I G QNG+ +A F RM GM + N R + + L+ AL
Sbjct: 357 AMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLP 416
Query: 258 ---------SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
A H G L+ G+ +H + G +S++ NALI MYGKC +++ R+ F
Sbjct: 417 SLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVF 476
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
+R K SWNS I + + E++ +F+ M+ D V++ ++++A
Sbjct: 477 NRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNML-------SRDVVSWTTIISAYAQAE 529
Query: 369 LVEQGRAYFKLM 380
++ +FK M
Sbjct: 530 RGDEAVEFFKTM 541
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 179/387 (46%), Gaps = 32/387 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+L L AR +FD + + + +MI+AY + A L+ D + G + +
Sbjct: 45 RLGRLREAREVFDAMPHRDIIAWNSMISAYCNS-GMLEDARILF-DAISGGNVRTATILL 102
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+ VL++R ++ E+ V A+V+ Y ++G DI +AR+LFD M
Sbjct: 103 SGYAR-LGRVLDAR-------RVFDGMPERNTVAWNAMVSCYVQNG-DITMARRLFDAMP 153
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
R+V SW +M++GY + +A +LF MP R++ W +I+G + FR
Sbjct: 154 SRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRM 213
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG--KVIHGYVYRNGLDLDSFISNALIDMY 295
M E + P+Q LSA+ TG+ LG +V+ V + G + D I +++++Y
Sbjct: 214 MHHEGAS---PDQSNFASVLSAV--TGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVY 268
Query: 296 GKCGS-LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
+ S L A + FD ++ +W++MI + + G+ + +I V+ R +I P
Sbjct: 269 TRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYG---RDPVKSI-PSQ 324
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
++ L C G + + R F+ + +P + + ++ + G +EA E+
Sbjct: 325 TALLTGLARC---GRITEARILFEQIP-----DPIVVSWNAMITGYMQNGMVDEAKELFD 376
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFA 441
M + + W ++ G GR++ A
Sbjct: 377 RMPFR-NTISWAGMIAGYAQNGRSEEA 402
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 159/458 (34%), Positives = 251/458 (54%), Gaps = 46/458 (10%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + N + M++ Y + +H A+ L+ +M P N + ++ +
Sbjct: 248 ARELFDRIPDRNVAAWNVMLSGYL-RLSHMEEAYKLFTEM-----PDKNSISWTTMISAL 301
Query: 125 PDVLESRGTKMVHTQ--IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
RG K+ + + K F+ + +TAL++ Y +S I AR +FD + R+ V
Sbjct: 302 -----VRGGKLQEAKDLLDKMPFDSF-AAKTALMHGYLQS-KMIDDARLIFDGLEVRDAV 354
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM---- 238
W MISGY G + A LF MP++D+ +WN++IAG +G A+ FR+M
Sbjct: 355 CWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQRN 414
Query: 239 --------------GMEVS----------DNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
G+ V D R + T C LSA L +G+ H
Sbjct: 415 TVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACADLAALHVGRQFHS 474
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
+ R+G DSF NALI Y KCG + EAR+ FD + SWN++I+ +A +G
Sbjct: 475 LLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYASNGHGTE 534
Query: 335 SICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG 394
+I VF EM +D+++RPD VTF+ +L+AC+H GL+++G +F MTK Y + P EHY
Sbjct: 535 AISVFREM---EDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKDYALRPVAEHYA 591
Query: 395 CLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPN 454
C+VDLLGR+GR EA E+++GM+++P+ VWG++L C+++ + A+ A +KL E++P+
Sbjct: 592 CMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAMLGACRVHKNHELAQLAAEKLYELEPH 651
Query: 455 NGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
++L+NI E GKWDE + +R +K+R +KTPG
Sbjct: 652 KTSNYVLLSNITAEAGKWDEAQNMRVFIKERGVHKTPG 689
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 187/411 (45%), Gaps = 55/411 (13%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L AR +FD + + NT Y AM++A A + A L+ ++ RR N + ++
Sbjct: 27 LAAARRLFDSMPSRNTVSYNAMLSALARH-GRIADARRLFDEIPRR-----NTVSWNAMI 80
Query: 122 KSCPD---VLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM-S 177
+C D V ++R + + GF T +V+ Y+R+G ++G+AR D M
Sbjct: 81 AACSDHGRVADAR--DLFDAMPARDGFSW-----TLMVSCYARAG-ELGLARDALDRMPG 132
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
D+ + AMISGY + G +A +L MP D+ +WNSV+ G T+NG A+ FF
Sbjct: 133 DKCTACYNAMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLTRNGEMVRAVKFFDE 192
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS-NALIDMYG 296
M D + N + G ++ G V G+ + +S L++ Y
Sbjct: 193 --MPARDMVSWNLML----------EGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNGYC 240
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD--G 354
+ G + EAR FDR + + +WN M++ + E + +F EM PD
Sbjct: 241 RAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEM---------PDKNS 291
Query: 355 VTFISLLNACTHGGLVEQGRAYF-KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
+++ ++++A GG +++ + K+ ++ + + H G L ++ ++A +
Sbjct: 292 ISWTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMH-GYL-----QSKMIDDARLIF 345
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTD-----FAEFAVKKLIEIDPNNGGYG 459
G+++ D V W ++++G G D F + K ++ + GY
Sbjct: 346 DGLEVR-DAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYA 395
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 145/329 (44%), Gaps = 60/329 (18%)
Query: 160 SRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVI 219
+RSG + AR+LFD M RN VS+ AM+S R G I +A LFD +P R+ +WN++I
Sbjct: 22 ARSGQ-LAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPRRNTVSWNAMI 80
Query: 220 AGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN 279
A C+ +G +DA F M P +
Sbjct: 81 AACSDHGRVADARDLFDAM---------PAR----------------------------- 102
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS-WNSMINSFALHGQSENSICV 338
D F ++ Y + G L AR A DR + T+ +N+MI+ +A HG+ ++++ +
Sbjct: 103 ----DGFSWTLMVSCYARAGELGLARDALDRMPGDKCTACYNAMISGYAKHGRFDDAVAL 158
Query: 339 FEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVD 398
EM PD +++ S+L T G + + +F M + + +++
Sbjct: 159 LREM-------PAPDIISWNSVLVGLTRNGEMVRAVKFFDEMPARDMVS-----WNLMLE 206
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGY 458
RAG + A + G+ P+ V W +LLNG GR A ++ D N +
Sbjct: 207 GYVRAGDVDSAAGLFAGVP-SPNVVSWVTLLNGYCRAGRIGEARELFDRI--PDRNVAAW 263
Query: 459 GIMLANIYGELGKWDEVRKVRKMLKDRNA 487
+ML+ Y L +E K+ + D+N+
Sbjct: 264 NVMLSG-YLRLSHMEEAYKLFTEMPDKNS 291
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 63/256 (24%)
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
+ SN + + G L ARR FD + S+N+M+++ A HG+ ++ +F+E+
Sbjct: 12 YRSNQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEI--- 68
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK-----------LMTKTYRIEPQI---- 390
R + V++ +++ AC+ G V R F LM Y ++
Sbjct: 69 ----PRRNTVSWNAMIAACSDHGRVADARDLFDAMPARDGFSWTLMVSCYARAGELGLAR 124
Query: 391 ------------EHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL-----NGCK 433
Y ++ + GRF++A+ +++ M PD + W S+L NG
Sbjct: 125 DALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLREMP-APDIISWNSVLVGLTRNGEM 183
Query: 434 IYGRTDFAEFAVKKLI-------------EIDPNNGGYG----------IMLANIYGELG 470
+ F E + ++ ++D G + + L N Y G
Sbjct: 184 VRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNGYCRAG 243
Query: 471 KWDEVRKVRKMLKDRN 486
+ E R++ + DRN
Sbjct: 244 RIGEARELFDRIPDRN 259
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 29/178 (16%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
+Q S L G +F L+ K + AR +FD + P+ + A+I YAS
Sbjct: 470 RQFHSLLARSGYIGDSFAGNALIS-AYAKCGRILEARQVFDEMPAPDIVSWNALIDGYAS 528
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQY- 148
H + A S++R+M +P++ + VL +C H ++ GF+ +
Sbjct: 529 N-GHGTEAISVFREM-EDNDVRPDEVTFVGVLSACS-----------HAGLIDEGFDFFN 575
Query: 149 ---------PVVE--TALVNSYSRSGNDIGIARKLFDEMSDR-NVVSWTAMISGYTRV 194
PV E +V+ RSG + A ++ M + N W AM+ G RV
Sbjct: 576 SMTKDYALRPVAEHYACMVDLLGRSGR-LSEAFEIIQGMQVQPNAGVWGAML-GACRV 631
>gi|242042383|ref|XP_002468586.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
gi|241922440|gb|EER95584.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
Length = 581
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 274/503 (54%), Gaps = 17/503 (3%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL-SNLTYARFIFDHLTTPNTYLYTAMI 84
I L+Q S L LG + +A +L+ F S+ YA + H P+ L+ +
Sbjct: 23 IAELRQHHSQLIRLGVASHPAHARRLLSFLARDPDSHFPYASRLLAHHPAPHPALFNPLF 82
Query: 85 TAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG 144
+A ++ HA+ +L + P+ F +P +L P +H ++K G
Sbjct: 83 SALPTR--HAARLLALMLSLPL----HPDHFTFPRIL---PGAQPLHLVAQLHALLLKLG 133
Query: 145 FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR-NVVSWTAMISGYTRVGDIKNAASL 203
F + AL+ +Y + +R D +VVSWT M+ G ++G + +A L
Sbjct: 134 FHAHTQSLNALLAAYLANARPDLASRVFRGGGGDALDVVSWTTMVGGLVKLGRVDDAREL 193
Query: 204 FDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHT 263
FD MP+R++ +WN++++G + G F DA+ F M D N A+ A
Sbjct: 194 FDGMPERNLVSWNAMMSGYVKTGRFLDALEVFDEMRARGVDG---NAFVAATAVVACTGA 250
Query: 264 GMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMI 323
G L G+ +H +V R+G+++D ++ A++DMY KCG ++EA R F+ + LTSWN MI
Sbjct: 251 GALARGREVHRWVERSGIEMDDKLATAVVDMYCKCGCVEEAWRVFEALPARGLTSWNCMI 310
Query: 324 NSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT 383
FA+HG+ E+++ +F M R + PD VT +++L AC H G+V +GR YF +++
Sbjct: 311 GGFAVHGRGEDALNLFGLMER---EGVAPDDVTLVNVLTACAHAGMVSEGRHYFNYISQR 367
Query: 384 YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEF 443
Y I P++EHYGC+VDL GRAG+ EEA +V++ M +EPD V G+L KI+G D E
Sbjct: 368 YGIVPKMEHYGCMVDLYGRAGQLEEAKKVIQDMPMEPDVGVLGALFGASKIHGDVDLGEA 427
Query: 444 AVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVH 503
++IE+DP N G ++LAN+ G+W++V +VR+++ +RN K G S IEV +V
Sbjct: 428 IGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNVSKEAGRSVIEVQGEVC 487
Query: 504 QFHSLDKTHPRTEEIYDALESMV 526
+F HP+ EE+Y M+
Sbjct: 488 EFQCGGLCHPQAEEVYAMARDMM 510
>gi|326506208|dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 582
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 158/430 (36%), Positives = 240/430 (55%), Gaps = 8/430 (1%)
Query: 97 AFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALV 156
A L+ ++R G P+ Y L C +H K G + V L+
Sbjct: 59 ALRLFDHLLRSGA-DPDPIAYALALARCARERAYPAAAQLHGHAAKRGAASHRRVRNGLI 117
Query: 157 NSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWN 216
++YS G + ARK+FD + ++++W ++ GY + D F MP RD +WN
Sbjct: 118 HAYSVCGM-LFDARKVFDHGPEVDMIAWNCLLRGYAQGRDTGALREFFAQMPARDSVSWN 176
Query: 217 SVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV 276
+VIA C NG +A++ FR M S+ +P++VTLV +SAI + G L G H YV
Sbjct: 177 TVIAWCVANGEHEEAVAVFREM--LASNECQPDRVTLVSVISAIAYLGALAQGLWAHAYV 234
Query: 277 YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENS 335
R +++D +S+ALI+MY KCG ++ A F+ + R + +WN+M+ F G SE +
Sbjct: 235 CRKEIEVDEKLSSALINMYSKCGFIEGAVYVFENSCALRSVDTWNAMLAGFTASGCSERA 294
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ +F M + P+ +TF +LLNAC+HGG VE+G YF+ MT + IEP I HYGC
Sbjct: 295 LELFTRM---ESSGFVPNKITFNTLLNACSHGGFVEEGIGYFERMTNSSSIEPDIAHYGC 351
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNN 455
+VDL RAG FE+A E+++ M +EPD VW +L+ C+ Y + + A +LIE PN+
Sbjct: 352 MVDLFCRAGLFEKAEEMIQMMPMEPDAAVWKALVGACRTYSNFELGKKAGHRLIEAAPND 411
Query: 456 GGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRT 515
++L+NIY G W V KVRK++ + K PG S IE+D +H+F S DK+H R
Sbjct: 412 HAGYVLLSNIYALDGNWKGVYKVRKLMLNCGVQKVPGSSSIELDGVIHEFISGDKSHSRK 471
Query: 516 EEIYDALESM 525
++Y+ L +
Sbjct: 472 RDVYEMLSEI 481
>gi|224077718|ref|XP_002305377.1| predicted protein [Populus trichocarpa]
gi|222848341|gb|EEE85888.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 229/385 (59%), Gaps = 11/385 (2%)
Query: 145 FEQYPVVETA----LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
F++ P+ + +++ Y ++G ++ A LF+ M +RNVVSW+ M+SGY + GD++ A
Sbjct: 35 FDEMPMKDAVSWNTILDGYVKAG-EMNKAFGLFESMPERNVVSWSTMVSGYCKAGDMEMA 93
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
LFD MP +++ +W +++G GL DAI F +M ++P+ T++ L++
Sbjct: 94 RMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQME---EAGLKPDDGTVISILASC 150
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
+G+L LGK +H + R +SNAL+DMY KCG + A F+ SKK L SWN
Sbjct: 151 AESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMSKKDLVSWN 210
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
M+ A+HG E ++ +F M + RPD VT +++L AC H G V++G YF M
Sbjct: 211 CMLQGLAMHGHGEKALQLFSIM---RQEGFRPDKVTLVAVLCACVHAGFVDEGIRYFNNM 267
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+ Y I P IEHYGC+VDLLGR GR +EA +V+ M +EP+ V+WG+LL C+++
Sbjct: 268 ERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLLGACRMHNAVGL 327
Query: 441 AEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDK 500
AE + L +++P++ G +L+NI+ G W V VR +K+ K G S IEVD
Sbjct: 328 AEEVLDCLFKLEPSDPGNYSLLSNIFASAGDWSSVANVRLQMKNFGIQKPSGASSIEVDD 387
Query: 501 QVHQFHSLDKTHPRTEEIYDALESM 525
+VH+F DK+HP++++IY + +
Sbjct: 388 EVHEFTVFDKSHPKSDKIYQMINRL 412
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 126/271 (46%), Gaps = 47/271 (17%)
Query: 171 KLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSD 230
+LF M +R+VVSW +MI G +VG++ A LFD MP +D +WN+++ G + G +
Sbjct: 2 RLFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNK 61
Query: 231 AISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNA 290
A F M P RN + + +S
Sbjct: 62 AFGLFESM---------PE----------------------------RNVVSWSTMVSG- 83
Query: 291 LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
Y K G ++ AR FDR K L SW +++ +A+ G ++++I FE+M ++ +
Sbjct: 84 ----YCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQM---EEAGL 136
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
+PD T IS+L +C GL+ G+ + + R + + LVD+ + G+ + AL
Sbjct: 137 KPDDGTVISILASCAESGLLGLGKRVHTSIERI-RYKCSVNVSNALVDMYAKCGQVDRAL 195
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
V GM + D V W +L G ++G + A
Sbjct: 196 SVFNGMS-KKDLVSWNCMLQGLAMHGHGEKA 225
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 123/295 (41%), Gaps = 53/295 (17%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K ++ AR +FD + N +T +++ YA + A A + M G +P+
Sbjct: 86 KAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVK-GLAKDAIRSFEQMEEAGL-KPDDGTV 143
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+L SC + K VHT I + ++ V ALV+ Y++ G + A +F+ MS
Sbjct: 144 ISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQ-VDRALSVFNGMS 202
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+++VSW M+ G G + A LF S R+
Sbjct: 203 KKDLVSWNCMLQGLAMHGHGEKALQLF----------------------------SIMRQ 234
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS------NAL 291
G RP++VTLV L A H G + G Y N ++ D I +
Sbjct: 235 EG------FRPDKVTLVAVLCACVHAGFVD-----EGIRYFNNMERDYGIVPHIEHYGCM 283
Query: 292 IDMYGKCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
+D+ G+ G LKEA R + + W +++ + +H N++ + EE++ C
Sbjct: 284 VDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLLGACRMH----NAVGLAEEVLDC 334
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 165/523 (31%), Positives = 280/523 (53%), Gaps = 41/523 (7%)
Query: 5 TNQLNQTLNQQ-VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL-KLSNL 62
+++LN N+Q L++L+RC + K++ + + LG +F LV C L + ++
Sbjct: 22 SSELNAKFNEQGWLSLLKRCKSMEEFKKVHAHILKLGLFYDSFCGSNLVASCALSRWGSM 81
Query: 63 TYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
YA IF + P ++ Y MI + A LY +M+ RG +P+ F YP VLK
Sbjct: 82 EYACSIFRQIEEPGSFEYNTMIRGNVNS-MDLEEALLLYVEMLERG-IEPDNFTYPFVLK 139
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
+C ++ + +H + +G E V+ + ++G
Sbjct: 140 ACSLLVALKEGVQIHAHVFNAGLE---------VDVFVQNG------------------- 171
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
+IS Y + G I++A +F+ M ++ V +W+S+I ++ + + M E
Sbjct: 172 ----LISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSRE- 226
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
R + LV ALSA H G LG+ IHG + RN +L+ + +LIDMY KCGSL+
Sbjct: 227 -GRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLE 285
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
+ F + K S+ MI A+HG+ ++ VF +M+ + + PD V ++ +L+
Sbjct: 286 KGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDML---EEGLTPDDVVYVGVLS 342
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H GLV++G F M + I+P I+HYGC+VDL+GRAG +EA +++K M I+P++
Sbjct: 343 ACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPND 402
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
VVW SLL+ CK++ + E A + +++ +N G ++LAN+Y KW V ++R +
Sbjct: 403 VVWRSLLSACKVHHNLEIGEIAADNIFKLNKHNPGDYLVLANMYARAQKWANVARIRTEM 462
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
++N +TPG S +E ++ V++F S DK+ P+ E IYD ++ M
Sbjct: 463 VEKNLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQM 505
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 255/470 (54%), Gaps = 45/470 (9%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + L A +FD + N +T MI+AY+ H A L M+R +PN +
Sbjct: 107 VKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIH-QKALELLVLMLR-DNVRPNVYT 164
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
Y VL+SC + + R M+H I+K G E V +AL++ +++
Sbjct: 165 YSSVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAK--------------- 206
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+G+ ++A S+FD M D WNS+I G QN A+ F+
Sbjct: 207 -----------------LGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFK 249
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
RM Q TL L A +L+LG H ++ + D D ++NAL+DMY
Sbjct: 250 RMK---RAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYC 304
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCGSL++A R F++ ++ + +W++MI+ A +G S+ ++ +FE M + +P+ +T
Sbjct: 305 KCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM---KSSGTKPNYIT 361
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+ +L AC+H GL+E G YF+ M K Y I+P EHYGC++DLLG+AG+ ++A++++ M
Sbjct: 362 IVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM 421
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
+ EPD V W +LL C++ AE+A KK+I +DP + G +L+NIY KWD V
Sbjct: 422 ECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVE 481
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
++R ++DR K PGCSWIEV+KQ+H F D +HP+ E+ L ++
Sbjct: 482 EIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLI 531
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 151/331 (45%), Gaps = 52/331 (15%)
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
+I+ Y + + +A LFD MP R+V +W ++I+ ++ + A+ M + DN
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLM---LRDN 157
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
+RPN T L + GM + +++H + + GL+ D F+ +ALID++ K G ++A
Sbjct: 158 VRPNVYTYSSVLRSC--NGMSDV-RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
FD WNS+I FA + +S+ ++ +F+ M R + T S+L ACT
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRA---GFIAEQATLTSVLRACT 271
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
L+E G + + + + LVD+ + G E+AL V MK E D + W
Sbjct: 272 GLALLELG---MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITW 327
Query: 426 GSLLNG----------CKIYGRTDFAE------------FA----------------VKK 447
++++G K++ R + FA +KK
Sbjct: 328 STMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK 387
Query: 448 LIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
L IDP YG M+ ++ G+ GK D+ K+
Sbjct: 388 LYGIDPVREHYGCMI-DLLGKAGKLDDAVKL 417
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 43/247 (17%)
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
RD+P + +GL++D+ ++ +++ C + H G L
Sbjct: 40 RDLPRAMKAMDSLQSHGLWADSATY--------------SELIKCCISNRAVHEGNL--- 82
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
I ++Y NG F+ N LI+MY K L +A + FD+ ++ + SW +MI++++
Sbjct: 83 --ICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKC 140
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT--------HGGLVEQGRAYFKLMT 381
+ ++ + M+R N+RP+ T+ S+L +C H G++++G
Sbjct: 141 KIHQKALELLVLMLR---DNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEG-------- 189
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+E + L+D+ + G E+AL V M + D +VW S++ G R+D A
Sbjct: 190 ----LESDVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVA 244
Query: 442 EFAVKKL 448
K++
Sbjct: 245 LELFKRM 251
>gi|357124715|ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 599
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 175/504 (34%), Positives = 278/504 (55%), Gaps = 20/504 (3%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMIT 85
I+ LKQ S L LG + + +L+ F + + YA + H P+ L+ +
Sbjct: 14 ISELKQHHSQLVRLGLASRPEHVRRLLAFLARDPAGVPYAARLLAHHPDPHPALFNPL-- 71
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
+AS P H ++AF ++ P+ F P +L + +H ++K F
Sbjct: 72 -FASLPPHHAAAFLA---LMLSLPLHPDHFTLPRLLPA----APLPLAAQLHALLLKLNF 123
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMS---DRNVVSWTAMISGYTRVGDIKNAAS 202
+ AL+ +Y +G +A +LF S D +VVSWT M+ G R+G + +A
Sbjct: 124 HSHAHSFNALLAAYLANGR-ADLASRLFGSCSSPGDLDVVSWTTMVGGLCRLGLVDDARK 182
Query: 203 LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGH 262
LFD MP+R++ +WN++I+G + G F DA+ F +M + I N A+ A
Sbjct: 183 LFDGMPERNLISWNAMISGYVKAGRFLDALEVFDQMR---ALGIEGNGFVAASAVVACTG 239
Query: 263 TGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSM 322
G+L G+ +H +V ++G+ +D ++ A++DMY KCGS++EA F K LTSWN M
Sbjct: 240 AGVLARGREVHRWVEQSGITMDEKLATAVVDMYCKCGSVEEAWHVFKVLPTKGLTSWNCM 299
Query: 323 INSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK 382
I A+HG+ +++I +F EM R ++ PD VT +++L AC H G+V G YF + +
Sbjct: 300 IGGLAVHGRCKDAIELFHEMER---EDVAPDDVTLVNVLTACAHTGMVSDGHNYFNYIVQ 356
Query: 383 TYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAE 442
Y IEP++EHYGC+VDL GRAG +EA +V+ M +EPD V G+L CKI+ D E
Sbjct: 357 RYGIEPKMEHYGCMVDLFGRAGLLDEAKKVIDDMPMEPDIGVLGALFGACKIHRDLDLGE 416
Query: 443 FAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQV 502
++IE+DP N G ++LAN+ G+W +V KVR+++ +RN K G S IE+D +V
Sbjct: 417 AIGWRVIELDPQNSGRYVLLANLLASAGQWVDVAKVRRLMDERNVSKEAGRSVIEIDGEV 476
Query: 503 HQFHSLDKTHPRTEEIYDALESMV 526
+F H + +EI+ A++ M+
Sbjct: 477 CEFQCGSLCHAQEKEIFAAVKDMM 500
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 159/469 (33%), Positives = 264/469 (56%), Gaps = 40/469 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L AR +FD + N +TAMI+AY SQ A A +L+ +M+R +PN F +
Sbjct: 137 KCDCLGDAREMFDEMPQKNVVSWTAMISAY-SQRGFAFEALNLFVEMLR-SDTEPNHFTF 194
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+L SC L + +H+ +K +E + V ++L++ Y++SG I A +F +
Sbjct: 195 ATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGR-ICDAHGVFHCLP 253
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+R+VV+ TA+ISGY Q GL +A+ FR+
Sbjct: 254 ERDVVACTAIISGY-------------------------------AQMGLDEEALKLFRQ 282
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
+ +E + N VT L+A+ L GK +H +V R+G + N+LIDMY K
Sbjct: 283 LQIE---GMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSK 339
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG++ ARR FD ++ SWN+M+ ++ HG + + +F ++MR +++ ++PD +T+
Sbjct: 340 CGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELF-KLMR-EENKVKPDSITY 397
Query: 358 ISLLNACTHGGLVEQG-RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+++L+ C+HG L + G ++ ++ IEP I HYGC+VDLLGRAGR EEA + +K M
Sbjct: 398 LAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKM 457
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
P +WGSLL C+++ + +KL+E++P N G ++L+N+Y GKW+++R
Sbjct: 458 PFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMR 517
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+R +++++ K PG SW+E+D+ VH FH+ D THPR EE+ ++ +
Sbjct: 518 NIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKEL 566
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 8/178 (4%)
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
G+ +H ++ + ++ LI +Y KC L +AR FD +K + SW +MI++++
Sbjct: 109 GQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQ 168
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
G + ++ +F EM+R + P+ TF ++L +C E GR + K E
Sbjct: 169 RGFAFEALNLFVEMLR---SDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKR-NYES 224
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
+ L+D+ ++GR +A V + E D V ++++G Y + E A+K
Sbjct: 225 HMFVGSSLLDMYAKSGRICDAHGVFHCLP-ERDVVACTAIISG---YAQMGLDEEALK 278
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 75/215 (34%), Gaps = 33/215 (15%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFI 68
N VL L +NH KQ+ S + GQ L+ + K N+ YAR I
Sbjct: 291 NSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYS-KCGNVCYARRI 349
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
FD + + AM+ Y S+ A L++ M + +P+ Y VL C
Sbjct: 350 FDSMPERTCISWNAMLVGY-SKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCS--- 405
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
H Q+ G E + +VN DIG + ++
Sbjct: 406 --------HGQLEDMGLEIF----YNMVNGKDGIEPDIG---------------HYGCVV 438
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPA-WNSVIAGC 222
R G ++ A MP A W S++ C
Sbjct: 439 DLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSC 473
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 157/513 (30%), Positives = 277/513 (53%), Gaps = 10/513 (1%)
Query: 8 LNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYAR 66
+++ + +++L+ ++Q+ + L G + + + V+ L + L YA
Sbjct: 9 MSRIVKHPAISLLDSGTTFKEIRQIHAKLYVDGTLKDDHLVGQFVKAVALSDHTYLDYAN 68
Query: 67 FIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP-QPNQFIYPHVLKSCP 125
I D P + +MI A+ P S F Y ++ G +P+ + ++++C
Sbjct: 69 QILDRSDKPTLFALNSMIRAHCKSPVPEKS-FDFYSRILSSGNGLKPDNYTVNFLVQACT 127
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
+ VH ++ GF+ P V+T L++ Y+ G + K+F+ +S + V T
Sbjct: 128 GLGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGC-LDSCHKVFNSVSYPDFVCRT 186
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
AM++ R GD+ A LF+ MP++D AWN++I+G Q G +A++ F M +E
Sbjct: 187 AMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLE---G 243
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
++ N V+++ LSA G L G+ H Y+ RN + + + L+D+Y KCG + +A
Sbjct: 244 VKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAM 303
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
F +K + +W+S +N A++G E + +F M + + P+ VTF+S+L C+
Sbjct: 304 EVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLM---KQDGVTPNAVTFVSVLRGCS 360
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
G V++G+ +F M + IEPQ++HYGCLVDL RAGR E+A+ +++ M ++ VW
Sbjct: 361 VVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVW 420
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
SLL+ ++Y + A KK++E++ +N G ++L+NIY + WD V VR+ +K +
Sbjct: 421 SSLLHASRMYKNLELGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSK 480
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
K PGCS +EV+ +VH+F DK+HP+ EI
Sbjct: 481 GVRKQPGCSVMEVNGEVHEFFVGDKSHPKYNEI 513
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/415 (32%), Positives = 227/415 (54%), Gaps = 38/415 (9%)
Query: 111 QPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIAR 170
+PN+ + ++ +C +H ++KSG + V AL+N Y ++G+ I +
Sbjct: 634 RPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLIS-SC 692
Query: 171 KLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSD 230
KLF+++S +N+VSW MI + QNGL +
Sbjct: 693 KLFEDLSVKNLVSWNTMIVIH-------------------------------LQNGLAEE 721
Query: 231 AISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNA 290
+++F M ++P+Q T + L G+++L + IHG + G + ++ I+ A
Sbjct: 722 GLAYF---NMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTA 778
Query: 291 LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNI 350
L+D+Y K G L+++ F + +W +M+ ++A HG ++I FE M+ + +
Sbjct: 779 LLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVH---YGL 835
Query: 351 RPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEAL 410
PD VTF LLNAC+H GLVE+GR YF+ M+K YRIEP+++HY C+VDL+GR+G ++A
Sbjct: 836 SPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAY 895
Query: 411 EVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELG 470
++K M +EP VWG+LL C++Y T A K+L E++P +G IML+NIY G
Sbjct: 896 GLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASG 955
Query: 471 KWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
W + ++R ++K + + G S+IE ++H+F D +HP +E+I L+ +
Sbjct: 956 LWKDASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEI 1010
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 10/233 (4%)
Query: 226 GLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
G RM M RPN+VT + +SA H G + G IHG V ++G+ +
Sbjct: 614 GYLGKCFEVLSRM-MRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEV 672
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
+ NAL+++YGK G L + + F+ S K L SWN+MI +G +E + F M R
Sbjct: 673 KVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYF-NMSRW 731
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL-MTKTYRIEPQIEHYGCLVDLLGRAG 404
++PD TF+++L C G+V + L M + I L+DL + G
Sbjct: 732 V--GLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCIT--TALLDLYAKLG 787
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKI--YGRTDFAEFAVKKLIEIDPNN 455
R E++ V + PD + W ++L YGR F + + P++
Sbjct: 788 RLEDSSTVFLEI-TSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDH 839
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 13/216 (6%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K +L + +F+ L+ N + MI + Q A + Y +M R +P+Q +
Sbjct: 684 KTGDLISSCKLFEDLSVKNLVSWNTMIVIHL-QNGLAEEGLA-YFNMSRWVGLKPDQATF 741
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
VL+ C D+ R ++ +H I+ GF + TAL++ Y++ G + + +F E++
Sbjct: 742 LAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGR-LEDSSTVFLEIT 800
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSM------PDRDVPAWNSVIAGCTQNGLFSDA 231
+ ++WTAM++ Y G ++A F+ M PD + ++ C+ +GL +
Sbjct: 801 SPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDH--VTFTHLLNACSHSGLVEEG 858
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
+F M I P C + +G +G+LQ
Sbjct: 859 RYYFETMSKRY--RIEPRLDHYSCMVDLMGRSGLLQ 892
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 262/466 (56%), Gaps = 13/466 (2%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD L + +T++ + Y + ++R+M G +PN +L +C
Sbjct: 132 ARRVFDDLVVRDVVSWTSLSSCYV-KCGFPRKGMDVFREMGWSGV-KPNPMTVSSILPAC 189
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
++ + + K +H V+ G V +ALV+ Y++ + + AR +FD M R+VVSW
Sbjct: 190 AELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLS-VREARMVFDLMPHRDVVSW 248
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPA----WNSVIAGCTQNGLFSDAISFFRRMGM 240
+++ Y + + + SLF M V A WN+VI GC +NG +A+ FR+M
Sbjct: 249 NGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQ- 307
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+PN++T+ L A + L++GK IH YV+R+ D + AL+ MY KCG
Sbjct: 308 --KMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGD 365
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
L +R FD +K + +WN+MI + A+HG + ++ +F++M+ + ++P+ VTF +
Sbjct: 366 LNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSR---VQPNSVTFTGV 422
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+ C+H LVE+G F M + + +EP HY C+VD+ RAGR EA + ++GM +EP
Sbjct: 423 LSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEP 482
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
WG+LL C++Y + A+ + KKL EI+PNN G + L NI W E +VR
Sbjct: 483 TASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRI 542
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
++K+R KTPGCSW++V +VH F DK++ +++IY+ L+ +V
Sbjct: 543 LMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELV 588
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 150/335 (44%), Gaps = 41/335 (12%)
Query: 48 AFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRR 107
+L+R L + + AR +FD++ P+ + +I+A + ++ A +Y + R
Sbjct: 15 GLRLIRV-ALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTH-GLSNEAIKIYSSLQER 72
Query: 108 GQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIG 167
G +P+ ++ K+C ++ K VH + G
Sbjct: 73 GI-KPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGV---------------------- 109
Query: 168 IARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGL 227
MSD V A+I Y + ++ A +FD + RDV +W S+ + + G
Sbjct: 110 --------MSD--VFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGF 159
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
+ FR MG ++PN +T+ L A L+ GK IHG+ R+G+ ++ F+
Sbjct: 160 PRKGMDVFREMGWS---GVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFV 216
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
+AL+ +Y KC S++EAR FD + + SWN ++ ++ + + E +F +M R
Sbjct: 217 CSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSR--- 273
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK 382
+R D T+ +++ C G E+ F+ M K
Sbjct: 274 DGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK 308
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 282 DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEE 341
++ S + LI + G AR+ FD + T+ +++I++ HG S +I ++
Sbjct: 9 NIPSHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSS 68
Query: 342 MMRCQDHNIRPDGVTFISLLNACTHGG 368
+ Q+ I+PD F++ AC G
Sbjct: 69 L---QERGIKPDMPVFLAAAKACAVSG 92
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 255/470 (54%), Gaps = 45/470 (9%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + L A +FD + N +T MI+AY+ H A L M+R +PN +
Sbjct: 107 VKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIH-QKALELLVLMLR-DNVRPNVYT 164
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
Y VL+SC + + R M+H I+K G E V +AL++ +++
Sbjct: 165 YSSVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAK--------------- 206
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+G+ ++A S+FD M D WNS+I G QN A+ F+
Sbjct: 207 -----------------LGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFK 249
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
RM Q TL L A +L+LG H ++ + D D ++NAL+DMY
Sbjct: 250 RMK---RAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYC 304
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCGSL++A R F++ ++ + +W++MI+ A +G S+ ++ +FE M + +P+ +T
Sbjct: 305 KCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM---KSSGTKPNYIT 361
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+ +L AC+H GL+E G YF+ M K Y I+P EHYGC++DLLG+AG+ ++A++++ M
Sbjct: 362 IVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM 421
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
+ EPD V W +LL C++ AE+A KK+I +DP + G +L+NIY KWD V
Sbjct: 422 ECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVE 481
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
++R ++DR K PGCSWIEV+KQ+H F D +HP+ E+ L ++
Sbjct: 482 EIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLI 531
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 151/331 (45%), Gaps = 52/331 (15%)
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
+I+ Y + + +A LFD MP R+V +W ++I+ ++ + A+ M + DN
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLM---LRDN 157
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
+RPN T L + GM + +++H + + GL+ D F+ +ALID++ K G ++A
Sbjct: 158 VRPNVYTYSSVLRSC--NGMSDV-RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
FD WNS+I FA + +S+ ++ +F+ M R + T S+L ACT
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRA---GFIAEQATLTSVLRACT 271
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
L+E G + + + + LVD+ + G E+AL V MK E D + W
Sbjct: 272 GLALLELG---MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITW 327
Query: 426 GSLLNG----------CKIYGRTDFAE------------FA----------------VKK 447
++++G K++ R + FA +KK
Sbjct: 328 STMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK 387
Query: 448 LIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
L IDP YG M+ ++ G+ GK D+ K+
Sbjct: 388 LYGIDPVREHYGCMI-DLLGKAGKLDDAVKL 417
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 43/247 (17%)
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
RD+P + +GL++D+ ++ +++ C + H G L
Sbjct: 40 RDLPRAMKAMDSLQSHGLWADSATY--------------SELIKCCISNRAVHEGNL--- 82
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
I ++Y NG F+ N LI+MY K L +A + FD+ ++ + SW +MI++++
Sbjct: 83 --ICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKC 140
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT--------HGGLVEQGRAYFKLMT 381
+ ++ + M+R N+RP+ T+ S+L +C H G++++G
Sbjct: 141 KIHQKALELLVLMLR---DNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEG-------- 189
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+E + L+D+ + G E+AL V M + D +VW S++ G R+D A
Sbjct: 190 ----LESDVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVA 244
Query: 442 EFAVKKL 448
K++
Sbjct: 245 LELFKRM 251
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 159/469 (33%), Positives = 265/469 (56%), Gaps = 40/469 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L AR +FD + N +TAMI+AY SQ A A +L+ +M+R +PN F +
Sbjct: 109 KCDCLGDARGMFDEMPQRNVVSWTAMISAY-SQRGFAFEALNLFVEMLR-SDTEPNHFTF 166
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+L SC L + +H+ +K +E + V ++L++ Y++SG I A +F +
Sbjct: 167 ATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGR-ICDAHGVFHCLP 225
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+R+VV+ TA+ISGY Q GL +A+ FR+
Sbjct: 226 ERDVVACTAIISGY-------------------------------AQMGLDEEALKLFRQ 254
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
+ +E + N VT L+A+ L GK +H +V R+G + N+LIDMY K
Sbjct: 255 LQIE---GMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSK 311
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG++ ARR FD ++ SWN+M+ ++ HG + + +F ++MR +++ ++PD +T+
Sbjct: 312 CGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELF-KLMR-EENKVKPDSITY 369
Query: 358 ISLLNACTHGGLVEQG-RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+++L+ C+HG L + G ++ ++ IEP I HYGC+VDLLGRAGR EEA + +K M
Sbjct: 370 LAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKM 429
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
P +WGSLL C+++ + +KL+E++P N G ++L+N+Y GKW+++R
Sbjct: 430 PFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMR 489
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+R +++++ K PG SW+E+D+ VH FH+ D THPR EE+ + ++ +
Sbjct: 490 NIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKEL 538
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 75/215 (34%), Gaps = 33/215 (15%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFI 68
N VL L +NH KQ+ S + GQ L+ + K N+ YAR I
Sbjct: 263 NSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYS-KCGNVCYARRI 321
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
FD + + AM+ Y S+ A L++ M + +P+ Y VL C
Sbjct: 322 FDSMPERTCISWNAMLVGY-SKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCS--- 377
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
H Q+ G E + +VN DIG + ++
Sbjct: 378 --------HGQLEDMGLEIF----YNMVNGKDGIEPDIG---------------HYGCVV 410
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPA-WNSVIAGC 222
R G ++ A MP A W S++ C
Sbjct: 411 DLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSC 445
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 140/351 (39%), Positives = 216/351 (61%), Gaps = 13/351 (3%)
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
D ++ +++I Y + + ++ +F + +RD +WNS+IAGC QNGLF + + FFR+
Sbjct: 271 DADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQ 330
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M M I+P + + A H L LGK +HGY+ RNG D + FI+++L+DMY K
Sbjct: 331 MLMA---KIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAK 387
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG+++ A++ FDR + + SW +MI ALHGQ+ ++I +FE+M +G+
Sbjct: 388 CGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQM--------ETEGIK- 438
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
++L AC+HGGLV++ YF MT+ + I P +EHY + DLLGRAGR EEA + + GM
Sbjct: 439 -AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMH 497
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
I P +W +LL+ C+++ D AE +++E+DPNN G I+LANIY +W E K
Sbjct: 498 IGPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAK 557
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
R ++ KTP CSWIEV +V+ F + D++HP E+I +A+E +V L
Sbjct: 558 WRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVEL 608
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 185/377 (49%), Gaps = 22/377 (5%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F+ + P + ++I Y S S S + M+ G P+ ++P VLKSC +
Sbjct: 62 LFNTIHFPPALAWKSVIRCYTSHGLPHQSLGS-FIGMLASGL-YPDHNVFPSVLKSCALL 119
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSR------SGNDIGIARKLFDEMSDRNV 181
++ + +H I++ G + AL+N YS+ SG A ++FDEM++R
Sbjct: 120 MDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTR 179
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
T + V I F+ MP++D+ +WN++IAG +NGL+ + + R MG
Sbjct: 180 SVRTVSVLSEDSVRKI------FEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMG-- 231
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
N++P+ TL L I + GK IHG R GLD D +++++LIDMY KC +
Sbjct: 232 -GANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRV 290
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
++ R F +++ SWNS+I +G + + F +M+ + I+P +F S++
Sbjct: 291 ADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAK---IKPKSYSFSSIM 347
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
AC H + G+ +T+ + I LVD+ + G A ++ M++ D
Sbjct: 348 PACAHLTTLHLGKQLHGYITRN-GFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR-D 405
Query: 422 EVVWGSLLNGCKIYGRT 438
V W +++ GC ++G+
Sbjct: 406 MVSWTAMIMGCALHGQA 422
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 6/171 (3%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F LT + + ++I A Q +R M+ + +P + + ++ +C +
Sbjct: 296 VFTLLTERDGISWNSII-AGCVQNGLFDEGLRFFRQMLM-AKIKPKSYSFSSIMPACAHL 353
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
K +H I ++GF++ + ++LV+ Y++ GN I A+++FD M R++VSWTAM
Sbjct: 354 TTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGN-IRTAKQIFDRMRLRDMVSWTAM 412
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
I G G +A LF+ M + A V+ C+ GL +A +F M
Sbjct: 413 IMGCALHGQAPDAIELFEQMETEGIKA---VLTACSHGGLVDEAWKYFNSM 460
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 162/461 (35%), Positives = 243/461 (52%), Gaps = 40/461 (8%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L R +FD + + + ++ A H A L R+M R G +P+ F VL
Sbjct: 123 LESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGE-ALGLVREMWRDGC-KPDSFTLSSVL 180
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+ + R +H ++GF V ++L++ Y+ +D +V
Sbjct: 181 PIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTR------------TDYSV 228
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
+FD++P RD WNS++AGC QNG +A+ FRRM
Sbjct: 229 --------------------KVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRM--- 265
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+ I+P VT + A G+ L LGK +H YV R G D + FIS++LIDMY KCG++
Sbjct: 266 LHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNV 325
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
ARR FDR + SW +MI ALHG + ++ +F+ M + N++P+ +TF+++L
Sbjct: 326 SIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRM---ELGNLKPNHITFLAVL 382
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
AC+H GLV++G YF M+ Y I P +EH+ L D LGR G+ EEA + GMKI+P
Sbjct: 383 TACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPT 442
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
VW +LL CK++ T AE KK+ +++P + G I+L+N Y G+W+E +RK
Sbjct: 443 ASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLRKS 502
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
++ + K P CSWIEV + H F + DK+HP E I DAL
Sbjct: 503 MRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDAL 543
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 150/341 (43%), Gaps = 30/341 (8%)
Query: 118 PHVLKSCPDV-LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
P LKSC + L + G + H ++SG AL+N Y + + EM
Sbjct: 62 PGALKSCAALGLRALGASL-HALALRSGAFADRFAANALLNLYCK----LPAPPSHSPEM 116
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
VV +++ +FD MP++DV +WN+++ GC ++G +A+ R
Sbjct: 117 DGSAVV--------------LESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVR 162
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M D +P+ TL L ++ G +HG+ RNG D F+ ++LIDMY
Sbjct: 163 EMW---RDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYA 219
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
C + + FD + WNSM+ A +G + ++ +F M+ I+P VT
Sbjct: 220 NCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHS---GIKPMPVT 276
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
F SL+ AC + + G+ + + + + L+D+ + G A + +
Sbjct: 277 FSSLIPACGNLASLLLGKQLHAYVIRG-GFDGNVFISSSLIDMYCKCGNVSIARRIFDRI 335
Query: 417 KIEPDEVVWGSLLNGCKIYG--RTDFAEFAVKKLIEIDPNN 455
+ PD V W +++ G ++G R F +L + PN+
Sbjct: 336 Q-SPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNH 375
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 137/323 (42%), Gaps = 50/323 (15%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRF---CTLKLSNLTYARFIFD 70
VL I + +L F T G F L+ CT Y+ +FD
Sbjct: 177 SSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCT----RTDYSVKVFD 232
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRG-QPQPNQFIYPHVLKSCPDVLE 129
+L + L+ +M+ A Q A L+R M+ G +P P F ++ +C ++
Sbjct: 233 NLPVRDAILWNSMLAGCA-QNGSVDEALGLFRRMLHSGIKPMPVTF--SSLIPACGNLAS 289
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
K +H +++ GF+ + ++L++ Y + GN + IAR++FD + ++VSWTAMI
Sbjct: 290 LLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGN-VSIARRIFDRIQSPDIVSWTAMIM 348
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
G+ G + A LFD M +G N++PN
Sbjct: 349 GHALHGPAREALVLFDRM-----------------------------ELG-----NLKPN 374
Query: 250 QVTLVCALSAIGHTGMLQLG-KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
+T + L+A H G++ G K + G+ AL D G+ G L+EA F
Sbjct: 375 HITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYN-F 433
Query: 309 DRNSKKRLTS--WNSMINSFALH 329
K + T+ W++++ + +H
Sbjct: 434 ISGMKIKPTASVWSTLLRACKVH 456
>gi|345505212|gb|AEN99830.1| chlororespiratory reduction 4, partial [Brassica oleracea]
Length = 590
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 165/493 (33%), Positives = 268/493 (54%), Gaps = 25/493 (5%)
Query: 20 LERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPN 76
L+ C+ + +K Q+ FL G F L+ +K L +AR +FD + +
Sbjct: 113 LKACSRLGFVKEGTQVHGFLIKTGTWSDLFLQNCLIGL-YIKCGFLGFARQVFDRMPERD 171
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
+ Y +MI Y + SA L+ M R + L + ++ +
Sbjct: 172 SVSYNSMIDGYV-KCGLVESAGELFDLMPREKRN----------LITWNSMIGGYAQRAD 220
Query: 137 HTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+ + F++ P + +++ Y + G I A+ LF+ M R+VV+W MI GY
Sbjct: 221 GVDVAEKLFDEMPEKDLISWNSMIGGYVKHGR-IEDAKGLFNVMPRRDVVTWAIMIDGYG 279
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
++G + A +LFD MP RDV A+NS+++G QN +A+ F M E ++ P++ +
Sbjct: 280 KLGLVHVAKTLFDQMPHRDVVAYNSMMSGYVQNRYHMEALEVFNHM--EKESHLTPDETS 337
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
LV LSAI G L +H Y+ L + ALIDMY KCGS++ A R F+
Sbjct: 338 LVIVLSAIAQLGRLSKAIDMHLYIVEKQFPLSGKLGVALIDMYSKCGSIQHAMRVFEGIE 397
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
K + WN+MI A+HG E++ F+ + + + +I+PD +TF+ +LNAC+H GLV++
Sbjct: 398 SKSIDHWNAMIGGLAVHGLGESA---FDMLFQIERRSIKPDHITFVGVLNACSHSGLVKE 454
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G F+LM + ++IEP+++HYGC+VD+L R+G + A +++GM IEP++V+W + L C
Sbjct: 455 GLLCFELMRRKHKIEPRLQHYGCMVDILARSGSIKLARNLIEGMPIEPNDVIWRTFLTAC 514
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+ + E K LI N ++L+N+Y G W +VR+VR M+K++N K PG
Sbjct: 515 SHHKEFETGELVAKHLILXGGYNPSSYVLLSNMYASNGMWKDVRRVRTMMKEKNIEKIPG 574
Query: 493 CSWIEVDKQVHQF 505
CSWIE+D +VH+F
Sbjct: 575 CSWIELDGRVHEF 587
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 138/338 (40%), Gaps = 77/338 (22%)
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
WN VI + +G+ F + +E S + ++ +L AL A G ++ G +HG
Sbjct: 74 WNVVIKSHS-HGVDPRKALFLLCLMLESS--VPVDKFSLSLALKACSRLGFVKEGTQVHG 130
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
++ + G D F+ N LI +Y KCG L AR+ FDR ++ S+NSMI+ + G E+
Sbjct: 131 FLIKTGTWSDLFLQNCLIGLYIKCGFLGFARQVFDRMPERDSVSYNSMIDGYVKCGLVES 190
Query: 335 SICVFEEMMRCQDHNI-----------RPDGV----------------TFISLLNACTHG 367
+ +F+ M R + + I R DGV ++ S++
Sbjct: 191 AGELFDLMPREKRNLITWNSMIGGYAQRADGVDVAEKLFDEMPEKDLISWNSMIGGYVKH 250
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG----------------------- 404
G +E + F +M + + + ++D G+ G
Sbjct: 251 GRIEDAKGLFNVMPRR-----DVVTWAIMIDGYGKLGLVHVAKTLFDQMPHRDVVAYNSM 305
Query: 405 -------RFE-EALEVVKGMKIE----PDEVVWGSLLNGCKIYGR----TDFAEFAVKKL 448
R+ EALEV M+ E PDE +L+ GR D + V+K
Sbjct: 306 MSGYVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLSAIAQLGRLSKAIDMHLYIVEKQ 365
Query: 449 IEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
P +G G+ L ++Y + G +V + ++ ++
Sbjct: 366 F---PLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKS 400
>gi|296087773|emb|CBI35029.3| unnamed protein product [Vitis vinifera]
Length = 1596
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 170/524 (32%), Positives = 273/524 (52%), Gaps = 47/524 (8%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHL 72
++ +++ + C+++ K + + G N+ KL+ FC L S +L+YA IF +
Sbjct: 5 KRCISLAQSCSNMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQI 64
Query: 73 TTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
PN + Y +I AY+ S P A F L D G P+Q +P ++ +C + L
Sbjct: 65 QNPNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVG---PDQHTFPFIISACTNSLWM 121
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
K +H ++K+G SDR+V TA++
Sbjct: 122 LLGKQIHNWVLKNGVAS-----------------------------SDRHVQ--TALVRF 150
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y + +A LFD +P+ DV WN ++ G + GL +A++ FR M + + P++
Sbjct: 151 YAECCAMGDARKLFDEIPNLDVVQWNVLLNGYVRRGLAPEALNAFRNM---LVSGVEPDE 207
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVY-RNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
L AL G LQ GK IH YV R L+ D FI AL+DMY KCG + + F+
Sbjct: 208 FCLTTALKGCAQLGALQQGKWIHEYVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFE 267
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
+K+ + SW++MI FALHG ++ E M + +RPDGV + ++ AC H GL
Sbjct: 268 GMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQV--EDGLRPDGVVLLGVIMACAHAGL 325
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
E+G+ + M Y I P+ EHY C+VDLL RAG+ +EAL++++ M ++P VWG+LL
Sbjct: 326 QEEGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEALKLIRRMPMKPRAAVWGALL 385
Query: 430 NGCKIYGRTDFAEFAVKKLIEIDPNNG----GYGIMLANIYGELGKWDEVRKVRKMLKDR 485
+GC+ + D AE A ++L+ + +G G + L+NIY K ++ ++R+M+ D+
Sbjct: 386 SGCRTHNNVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACRIRRMIGDK 445
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVALH 529
PGCS IEV+ +V+QF S D +HP +I++ L+ + H
Sbjct: 446 RIKTKPGCSLIEVEGEVNQFVSGDISHPCLAQIHEMLDLVSLQH 489
>gi|224126329|ref|XP_002329527.1| predicted protein [Populus trichocarpa]
gi|222870236|gb|EEF07367.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 228/370 (61%), Gaps = 10/370 (2%)
Query: 159 YSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSV 218
Y + G + +ARK+FDEM +NV+ WT+M+SGY G++ A LF+ P +DV W ++
Sbjct: 2 YCKCGC-LSVARKIFDEMPHKNVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTAM 60
Query: 219 IAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR 278
I G Q F +A++ F+ M ++ ++P++ LV L+ G L+ G IHGY+
Sbjct: 61 INGYVQFNHFDEAVALFQEMQIQ---RVKPDKFVLVALLTGCAQMGALEQGTWIHGYIDE 117
Query: 279 NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICV 338
G+ +D+ + +LI+MY KCG +++A R F +K +W S+I A++G++ ++ +
Sbjct: 118 KGIPVDAVVGTSLIEMYSKCGCIEKALRIFCGLREKDTATWTSIICGLAMNGKTSKALEL 177
Query: 339 FEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVD 398
F +M + + PD VTFI +L+AC+HGGLVE+GR +F MT Y IEP++EHYGCL+D
Sbjct: 178 FSKMKQVE---AIPDEVTFIGVLSACSHGGLVEEGREFFNSMTSIYNIEPKLEHYGCLID 234
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVV---WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNN 455
LLGRAG+ +EA E++K + +E++ +GSLL+ C+IY E ++L++I+ +
Sbjct: 235 LLGRAGQLDEAEELIKKIVNANNEIIVPLYGSLLSACRIYKNVQMGERVAEQLVKIESRD 294
Query: 456 GGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRT 515
+LANIY G+W +V +VR+ +KD K PGCS IEVD VH+F + +
Sbjct: 295 SSVHTLLANIYASAGRWVDVNRVRREMKDLGVKKVPGCSSIEVDGIVHEFLVGNPSCSEM 354
Query: 516 EEIYDALESM 525
EIY L+ M
Sbjct: 355 REIYSMLDRM 364
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L AR +F+ + L+TAMI Y Q H A +L+++M + + +P++F+ +L
Sbjct: 39 LDKARELFERSPVKDVVLWTAMINGYV-QFNHFDEAVALFQEM-QIQRVKPDKFVLVALL 96
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
C + +H I + G VV T+L+ YS+ G I A ++F + +++
Sbjct: 97 TGCAQMGALEQGTWIHGYIDEKGIPVDAVVGTSLIEMYSKCGC-IEKALRIFCGLREKDT 155
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRD-VP---AWNSVIAGCTQNGLFSDAISFFRR 237
+WT++I G G A LF M + +P + V++ C+ GL + FF
Sbjct: 156 ATWTSIICGLAMNGKTSKALELFSKMKQVEAIPDEVTFIGVLSACSHGGLVEEGREFFN- 214
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGML 266
M NI P C + +G G L
Sbjct: 215 -SMTSIYNIEPKLEHYGCLIDLLGRAGQL 242
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 41/211 (19%)
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN------------------- 334
MY KCG L AR+ FD K + W SM++ + +G+ +
Sbjct: 1 MYCKCGCLSVARKIFDEMPHKNVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTAM 60
Query: 335 ------------SICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR-AYFKLMT 381
++ +F+EM Q ++PD ++LL C G +EQG + +
Sbjct: 61 INGYVQFNHFDEAVALFQEM---QIQRVKPDKFVLVALLTGCAQMGALEQGTWIHGYIDE 117
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
K ++ + L+++ + G E+AL + G++ E D W S++ G + G+T A
Sbjct: 118 KGIPVDAVVGTS--LIEMYSKCGCIEKALRIFCGLR-EKDTATWTSIICGLAMNGKTSKA 174
Query: 442 --EFAVKKLIEIDPNNGGY-GIMLANIYGEL 469
F+ K +E P+ + G++ A +G L
Sbjct: 175 LELFSKMKQVEAIPDEVTFIGVLSACSHGGL 205
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 265/471 (56%), Gaps = 46/471 (9%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K ++ AR IFD +T + +MI Y Q +A +++ M+ Q +
Sbjct: 323 KCGSVGTARLIFDRMTGKTVVSWNSMIDGYV-QNGDPGAAMEIFQKMMDE-QVEMTNVTV 380
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM- 176
L +C D+ + + VH KL D++
Sbjct: 381 MGALHACADLGDVEQGRFVH---------------------------------KLLDQLE 407
Query: 177 --SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
SD +V++ ++IS Y++ + AA +F+++ + + +WN++I G QNG ++AI +
Sbjct: 408 LGSDVSVMN--SLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDY 465
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
F +M ++ NI+P+ T+V + A+ +L K IHG V R LD + F++ AL+DM
Sbjct: 466 FCKMQLQ---NIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDM 522
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KCG++ AR+ FD ++ +T+WN+MI+ + HG + ++ +FE+M + I+P+
Sbjct: 523 YAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKM---KKEVIKPNE 579
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
VTF+ +L+AC+H GLVE+G YF M K Y +EP ++HYG +VDLLGRA R EA + ++
Sbjct: 580 VTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQ 639
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M IEP V+G++L C+I+ + E A ++ ++DP++GGY ++LANIY WD+
Sbjct: 640 KMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDK 699
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
V +VR ++ + KTPG S +E+ +VH F+S +HP+ ++IY LE++
Sbjct: 700 VARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETL 750
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 204/440 (46%), Gaps = 47/440 (10%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDHLTTPNT 77
+LE C + L Q + G + + KLV FC K +L A +F +
Sbjct: 83 LLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFC--KFGSLHEAARVFQPIEDKID 140
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
LY M+ YA + A S + M R +P + + ++LK C D + R K +H
Sbjct: 141 ELYHTMLKGYARNSS-LDDAVSFFCRM-RYDGVRPVVYNFTYLLKVCGDNADLRKGKEIH 198
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
Q++ +GF NV + T +++ Y + +
Sbjct: 199 CQLIVNGFAS--------------------------------NVFAMTGVVNMYAKCRLV 226
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
+ A +FD MP+RD+ WN++I+G QNG A+ RM E RP+ +T+V L
Sbjct: 227 EEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEE---GKRPDSITIVSIL 283
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
A+ G L++G+ IHGY R G + +S AL+DMY KCGS+ AR FDR + K +
Sbjct: 284 PAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVV 343
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
SWNSMI+ + +G ++ +F++MM D + VT + L+AC G VEQGR
Sbjct: 344 SWNSMIDGYVQNGDPGAAMEIFQKMM---DEQVEMTNVTVMGALHACADLGDVEQGRFVH 400
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
KL+ + + + L+ + + R + A E+ + ++ V W +++ G GR
Sbjct: 401 KLLDQ-LELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQ-HKTLVSWNAMILGYAQNGR 458
Query: 438 TDFA--EFAVKKLIEIDPNN 455
+ A F +L I P++
Sbjct: 459 INEAIDYFCKMQLQNIKPDS 478
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 141/299 (47%), Gaps = 9/299 (3%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T ++S + + G + AA +F + D+ +++++ G +N DA+SFF RM D
Sbjct: 113 TKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRY---D 169
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+RP L G L+ GK IH + NG + F +++MY KC ++EA
Sbjct: 170 GVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEA 229
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ FDR ++ L WN++I+ +A +G + ++ E ++R Q+ RPD +T +S+L A
Sbjct: 230 YKMFDRMPERDLVCWNTIISGYAQNGFGKTAL---ELVLRMQEEGKRPDSITIVSILPAV 286
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
G + GR+ + E + LVD+ + G A + M + V
Sbjct: 287 ADVGSLRIGRSIHGYSMRA-GFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKT-VVS 344
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLA-NIYGELGKWDEVRKVRKML 482
W S+++G G A +K+++ +M A + +LG ++ R V K+L
Sbjct: 345 WNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLL 403
>gi|242094040|ref|XP_002437510.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
gi|241915733|gb|EER88877.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
Length = 653
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 168/472 (35%), Positives = 267/472 (56%), Gaps = 19/472 (4%)
Query: 64 YARFIFDHLTTPNTYLYTAMIT-AYASQPAHASSAFSLYRDMVR-RGQPQPN-QFIYPHV 120
YA +F L+ P+ +L A++ A+ +QP + F ++ + R G+ P F + +
Sbjct: 95 YAVAVFSSLSPPDPFLAAALLRFAHLTQPPLET--FRVFSGLRRAHGRDLPFLPFAFSPL 152
Query: 121 LKSCPDVLESRGTKMVHT-QIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
KS H ++ GF+++ VE +L+ +Y G D+G ARK+ DEM +
Sbjct: 153 AKSAAAARSLPAAAGAHAVSLLLGGFDKHRFVENSLIGAYVACG-DVGAARKVLDEMVVK 211
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM- 238
+V+SWT++++ Y+R D+ +A +F P +D+ AW +++ G QN + A+ F +M
Sbjct: 212 DVISWTSIVAAYSRSRDMGSAEEVFALCPVKDMVAWTAMVTGYAQNAMPVKALEAFEQMA 271
Query: 239 --GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
GM + ++V+L A+SA G ++ I R+GL + + + L+DMY
Sbjct: 272 GAGMPI------DEVSLTGAISACAQLGAVRRAVWIQEIADRSGLGRNVVVGSGLVDMYA 325
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG + EA R F+ +K + +++SMI A HG++ ++I +F +M+R D + P+ VT
Sbjct: 326 KCGLIDEACRVFEGMQEKNVYTYSSMIVGLASHGRANDAIALFNDMVRRAD--VEPNHVT 383
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
FI +L AC+H G+V++GR YF M Y I P +HY C+VDLLGRAG EAL++VK M
Sbjct: 384 FIGVLTACSHAGMVKEGRYYFAQMKDRYGILPSADHYTCMVDLLGRAGLVIEALDLVKSM 443
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
+EP VWG+LL C+I+G T A+ A + L +++P G ++L+N G+WDEV
Sbjct: 444 TVEPHGGVWGALLGACRIHGNTKVAKVAAQHLFKLEPEGIGNYVLLSNTLASAGEWDEVS 503
Query: 477 KVRKMLKDRNAYKTPGCSWIE-VDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
KVRK+++ R K P S E D VHQF + D THP EI L + A
Sbjct: 504 KVRKLMRIRGLKKDPAVSSFEGRDGLVHQFFAGDNTHPWMHEIKKTLLELRA 555
>gi|326527617|dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 158/470 (33%), Positives = 265/470 (56%), Gaps = 14/470 (2%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K ++ A +FD + + +IT Y S+ A L+ M RR N I
Sbjct: 166 KNGDMESAVSVFDEMPVKDPIPINCLITGY-SKAGDVDKARRLFDGMERRTSASWNSMIA 224
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN-DIGI-ARKLFDE 175
+ E R + +++ G + T++ + ++SG+ D G R L E
Sbjct: 225 CYAHGG-----EFREALTLFDRMLSEGARPNAITITSVFSICAKSGDLDTGKRVRDLIGE 279
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
+NV+ TA++ Y + I +A FD M RDV AW+++IAG QNG +++ F
Sbjct: 280 DDLQNVIVHTALMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELF 339
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
RM + + RPN+VTLV +SA G +L + I Y L L S++ +ALIDMY
Sbjct: 340 ERMK---ATDCRPNEVTLVGVISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALIDMY 396
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
+CG + AR F R +K + +WNSMI A++G +E++I ++E+M ++ ++P+ +
Sbjct: 397 TRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEKM---AENGVQPNEI 453
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF++LL ACTH GLV+QG A+F+ M + + + PQ+EH C+VDLL ++G EA + +
Sbjct: 454 TFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYKFICD 513
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M++EP+ V+W +LL+ C+ + + A+ A +KL+ ++P+N ++L+NIY + G W +
Sbjct: 514 MEVEPNAVIWTTLLSSCRAHADVELAKLASRKLLAMEPDNSSIYVLLSNIYADAGLWGDA 573
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
R++R +++ +N K SWI++D +VH+F D HPR+ EIYD + +
Sbjct: 574 REIRDLMRSKNVQKLSAYSWIKLDGEVHKFLVQDTYHPRSAEIYDVIHGL 623
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 207/408 (50%), Gaps = 28/408 (6%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + P L + +++ + +H + M R+G P+ + P V KSC
Sbjct: 72 ARNLFDAVPRPAPALCSTFLSSLSRASSH-HDLLQTFSSMHRKGAYVPSGCV-PLVFKSC 129
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
S + VH + G V TALV+ Y+++G D+ A +FDEM ++ +
Sbjct: 130 ALTASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNG-DMESAVSVFDEMPVKDPIPI 188
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+I+GY++ GD+ A LFD M R +WNS+IA G F +A++ F RM +S+
Sbjct: 189 NCLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRM---LSE 245
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
RPN +T+ S +G L GK + + + L + + AL++MY KC ++ +A
Sbjct: 246 GARPNAITITSVFSICAKSGDLDTGKRVRDLIGEDDLQ-NVIVHTALMEMYVKCRAIDDA 304
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
RR FDR S++ + +W++MI +A +G+ S+ +FE M + + RP+ VT + +++AC
Sbjct: 305 RREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERM---KATDCRPNEVTLVGVISAC 361
Query: 365 THGG---LVEQGRAYFKLMTKTYRIEPQIEHYG-CLVDLLGRAGRFEEALEVVKGMKIEP 420
G LVEQ Y + R+ P + G L+D+ R G A V M+ +
Sbjct: 362 AQLGSDELVEQIGNY----AENQRL-PLTSYLGSALIDMYTRCGHVGRARSVFSRME-QK 415
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAV---KKLIE--IDPNNGGYGIMLA 463
+ W S++ G + G FAE A+ +K+ E + PN + +LA
Sbjct: 416 GVITWNSMIRGLAMNG---FAEDAISLYEKMAENGVQPNEITFVALLA 460
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 155/463 (33%), Positives = 254/463 (54%), Gaps = 11/463 (2%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQ--PAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
AR +FD + + +I Y + PA A F +R + +P++ +
Sbjct: 179 ARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELF--WRMVAEDAVVRPDEVTMIAAVS 236
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
C + + + +H + G + AL++ Y + G+ + +A+ +F+ + R VV
Sbjct: 237 GCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGS-LEMAKSVFERIEHRTVV 295
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
SWT MI G+ + G + +A +FD MP+RDV WN+++ G Q +A+S F M
Sbjct: 296 SWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQ--- 352
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
++ P+++T+V L+A G L++G +H Y+ ++ L + +LIDMY KCG+++
Sbjct: 353 EASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIE 412
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
+A F +K +W +MI A HG + +I F M+ +PD +TFI +L+
Sbjct: 413 KAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQ---KPDEITFIGVLS 469
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC H GLV++GR +F LM Y +E +++HY C++DLLGRAG +EA ++V M +EPD
Sbjct: 470 ACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDA 529
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
VVWG++ C++ G E A KL+EIDP++ G ++LAN+Y E + KVR M+
Sbjct: 530 VVWGAIFFACRMQGNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEANMRKKADKVRAMM 589
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ K PGCS IE++ VH+F DK+H + IYD L +
Sbjct: 590 RHLGVEKVPGCSCIELNGVVHEFIVKDKSHMDSHAIYDCLHEI 632
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 182/382 (47%), Gaps = 63/382 (16%)
Query: 98 FSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVN 157
LYR ++R G +P+ +P +LK+C + E +++ G +
Sbjct: 109 LPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLD----------- 157
Query: 158 SYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNS 217
+D+ + +S R G +++A LFD P RD+ +WN+
Sbjct: 158 ------SDVFVVNAATHFLSIR---------------GPMEDARRLFDRSPVRDLVSWNT 196
Query: 218 VIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVY 277
+I G + G ++A+ F RM E +RP++VT++ A+S G L+LG+ +HG+V
Sbjct: 197 LIGGYVRRGNPAEALELFWRMVAE-DAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVD 255
Query: 278 RNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSIC 337
+G+ + NAL+DMY KCGSL+ A+ F+R + + SW +MI FA G +++
Sbjct: 256 SDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARK 315
Query: 338 VFEEM---------------MRC-------------QDHNIRPDGVTFISLLNACTHGGL 369
VF+EM ++C Q+ ++ PD +T ++LL AC+ G
Sbjct: 316 VFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGA 375
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
+E G + + K +R+ + L+D+ + G E+A+ + K + E + + W +++
Sbjct: 376 LEMGMWVHRYIEK-HRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIP-EKNALTWTAMI 433
Query: 430 NGCKIYGRTDFAEFAVKKLIEI 451
G +G + A + +IE+
Sbjct: 434 CGLANHGHANEAIEHFRTMIEL 455
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 18/265 (6%)
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCT--------QNGLFSDAISFFRRMGMEVSDNIRP 248
+++A +L S+P A+N+ I + +G+ + +R + S RP
Sbjct: 69 LRHALALLSSLP---ASAYNAAIRALSLSDDGDRHGHGVVRRCLPLYR--ALLRSGTARP 123
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
+ +T L A G +V R GLD D F+ NA G +++ARR F
Sbjct: 124 DHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLF 183
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
DR+ + L SWN++I + G ++ +F M+ +D +RPD VT I+ ++ C
Sbjct: 184 DRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMV-AEDAVVRPDEVTMIAAVSGCGQMR 242
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV-WGS 427
+E GR + + + + L+D+ + G E A V + +IE VV W +
Sbjct: 243 DLELGRRLHGFV-DSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFE--RIEHRTVVSWTT 299
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEID 452
++ G +G D A ++ E D
Sbjct: 300 MIVGFAKFGLMDDARKVFDEMPERD 324
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 265/519 (51%), Gaps = 41/519 (7%)
Query: 1 MVSVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS 60
MV+ +L+ L + + + + K++ S++ G + LV K
Sbjct: 370 MVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDI-YFKGG 428
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
++ A F T + + TAMI+ Y + A +L+R +++ G PN V
Sbjct: 429 DVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVE-ALNLFRWLIQEGM-VPNCLTMASV 486
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
L +C + + K +H I+K G E V +++ Y++SG
Sbjct: 487 LPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGR---------------- 530
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
+ A F MP +D WN +I +QNG AI FR+MG
Sbjct: 531 ----------------LDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMG- 573
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ + + V+L LSA + L GK +H +V RN D+F+++ LIDMY KCG
Sbjct: 574 --TSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGK 631
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
L AR FD K SWNS+I ++ HG+ + +F EM+ + I+PD VTF+ +
Sbjct: 632 LALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMV---EAGIQPDHVTFLVI 688
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
++AC H GLV++G YF+ MT+ Y I ++EH+ C+VDL GRAGR EA + +K M P
Sbjct: 689 MSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTP 748
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
D WGSLL C+++G + A+ A K L+E+DPNN GY ++L+N++ G+W+ V KVR
Sbjct: 749 DAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRS 808
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
++K++ K PG SWI+V+ H F + D HP++ EIY
Sbjct: 809 LMKEKGVQKIPGYSWIDVNGGTHMFSAADGCHPQSVEIY 847
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 174/377 (46%), Gaps = 42/377 (11%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+++FD L + L+ M+ Y +SA +++M R +PN + +L C
Sbjct: 231 AKYLFDELPVRDCILWNVMLNGYVKN-GDFNSALGTFQEM-RNSCVKPNSVSFVCLLSVC 288
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
R +H +++SGFE P V ++ YS+ GN LFD
Sbjct: 289 ATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGN-------LFD---------- 331
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
A +FD MP D WN +IAG QNG +A++ F+ M V+
Sbjct: 332 ---------------ARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAM---VTS 373
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
++ + +T L ++ +G L+ K +H Y+ R+G+ D ++ +AL+D+Y K G ++ A
Sbjct: 374 GVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMA 433
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ F +N+ + +MI+ + L+G + ++ +F +++ + P+ +T S+L AC
Sbjct: 434 CKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQ---EGMVPNCLTMASVLPAC 490
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
++ G+ + K +E + + + ++GR + A + + M ++ D V
Sbjct: 491 AALASLKLGKELHCDILKK-GLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVK-DSVC 548
Query: 425 WGSLLNGCKIYGRTDFA 441
W ++ G+ + A
Sbjct: 549 WNLMIVSFSQNGKPELA 565
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 143/303 (47%), Gaps = 39/303 (12%)
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
P+++ +P+V+K+C + KMVH GF D+ I
Sbjct: 175 PDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHM-----------------DLFIG-- 215
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
+++I YT G I +A LFD +P RD WN ++ G +NG F+ A
Sbjct: 216 -------------SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSA 262
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
+ F+ M + ++PN V+ VC LS G+++ G +HG V R+G + D ++N +
Sbjct: 263 LGTFQEMR---NSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTI 319
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIR 351
I MY KCG+L +AR+ FD + +WN +I + +G ++ ++ +F+ M+ ++
Sbjct: 320 ITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMV---TSGVK 376
Query: 352 PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALE 411
D +TF S L + G ++ + + + + + + LVD+ + G E A +
Sbjct: 377 LDSITFASFLPSVLKSGSLKYCKEVHSYIVR-HGVPFDVYLKSALVDIYFKGGDVEMACK 435
Query: 412 VVK 414
+
Sbjct: 436 TFQ 438
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 142/310 (45%), Gaps = 15/310 (4%)
Query: 141 VKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
++S F +P + +LV R I K+ + ++ + M+ Y K+
Sbjct: 76 LESMFRAFPNSDASLVKQQVRQ-----IHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDV 130
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
+LF + WN +I G + G F A+ FF RM + N+ P++ T + A
Sbjct: 131 GNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRM---LGSNVAPDKYTFPYVIKAC 187
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
G + L K++H G +D FI ++LI +Y G + +A+ FD + WN
Sbjct: 188 GGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWN 247
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
M+N + +G +++ F+EM ++ ++P+ V+F+ LL+ C G+V G L+
Sbjct: 248 VMLNGYVKNGDFNSALGTFQEM---RNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLV 304
Query: 381 TKT-YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
++ + +P + + ++ + + G +A ++ M + D V W L+ G G TD
Sbjct: 305 IRSGFESDPTVAN--TIITMYSKCGNLFDARKIFDIMP-QTDTVTWNGLIAGYVQNGFTD 361
Query: 440 FAEFAVKKLI 449
A K ++
Sbjct: 362 EAVALFKAMV 371
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 178/536 (33%), Positives = 265/536 (49%), Gaps = 63/536 (11%)
Query: 1 MVSVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS 60
MV+ +L+ T VL + + +Q LG ++ L+ + K
Sbjct: 195 MVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFS-KCE 253
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQ----------- 109
++ AR +F + P+ Y A+I+ ++ A +R+++ GQ
Sbjct: 254 DVDTARLLFGMIRKPDLVSYNALISGFSCN-GETECAVKYFRELLVSGQRVSSSTMVGLI 312
Query: 110 PQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIA 169
P + F + H L C + VKSG P V TAL YS
Sbjct: 313 PVSSPFGHLH-LACC-----------IQGFCVKSGTILQPSVSTALTTIYS--------- 351
Query: 170 RKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
R+ +I A LFD ++ V AWN++I+G Q+GL
Sbjct: 352 -----------------------RLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTE 388
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
AIS F+ M ++ PN VT+ LSA G L GK +H + L+ + ++S
Sbjct: 389 MAISLFQEM---MTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVST 445
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
ALIDMY KCG++ EA + FD S+K +WN+MI + LHG + ++ +F EM+
Sbjct: 446 ALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHL---G 502
Query: 350 IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEA 409
+P VTF+S+L AC+H GLV +G F M YRIEP EHY C+VD+LGRAG+ E+A
Sbjct: 503 FQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKA 562
Query: 410 LEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGEL 469
LE ++ M +EP VWG+LL C I+ T+ A A ++L E+DP N GY ++L+NIY
Sbjct: 563 LEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVE 622
Query: 470 GKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ + VR+ +K RN KTPGC+ IEV+ H F D++H +T IY LE +
Sbjct: 623 RNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEEL 678
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 188/458 (41%), Gaps = 79/458 (17%)
Query: 64 YARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
+AR +F + P+ +L+ +I ++ P +S+ S Y +++ P+ F Y + +
Sbjct: 58 HARALFFSVPKPDIFLFNVLIKGFSFSPD--ASSISFYTHLLKNTTLSPDNFTYAFAISA 115
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
PD ++ G +H V GF+ V +ALV+ Y +
Sbjct: 116 SPD--DNLGM-CLHAHAVVDGFDSNLFVASALVDLYCK---------------------- 150
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
++RV A +FD MPDRD WN++I G +N + D++ F+ M V+
Sbjct: 151 -------FSRVA---YARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDM---VA 197
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
+R + T+ L A+ +++G I + G D ++ LI ++ KC +
Sbjct: 198 QGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDT 257
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
AR F K L S+N++I+ F+ +G++E ++ F E++ R T + L+
Sbjct: 258 ARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQ---RVSSSTMVGLIPV 314
Query: 364 ----------------CTHGGLVEQGRAYFKLMTKTYRI--------------EPQIEHY 393
C G + Q L T R+ E + +
Sbjct: 315 SSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAW 374
Query: 394 GCLVDLLGRAGRFEEALEVVKGM---KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE 450
++ ++G E A+ + + M + P+ V S+L+ C G F + +V +LI+
Sbjct: 375 NAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGK-SVHQLIK 433
Query: 451 ID--PNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
N L ++Y + G E ++ + ++N
Sbjct: 434 SKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKN 471
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 18/260 (6%)
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
VG ++A +LF S+P D+ +N +I G + + S +ISF+ + + + P+ T
Sbjct: 53 VGATRHARALFFSVPKPDIFLFNVLIKGFSFSPDAS-SISFYTHLLKNTT--LSPDNFTY 109
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
A+SA LG +H + +G D + F+++AL+D+Y K + AR+ FD+
Sbjct: 110 AFAISASPDD---NLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPD 166
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ WN+MI + ++S+ VF++M+ +R D T ++L A V+ G
Sbjct: 167 RDTVLWNTMITGLVRNCCYDDSVQVFKDMVA---QGVRLDSTTVATVLPAVAEMQEVKVG 223
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEA--LEVVKGMKIEPDEVVWGSLLNG 431
+ ++ + Y L L+ + E+ ++ GM +PD V + +L++G
Sbjct: 224 MG---IQCLALKLGFHFDDY-VLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISG 279
Query: 432 CKIYGRTDFAEFAVKKLIEI 451
G T E AVK E+
Sbjct: 280 FSCNGET---ECAVKYFREL 296
>gi|255568474|ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 169/499 (33%), Positives = 266/499 (53%), Gaps = 9/499 (1%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
K++ F+ G F L+ + + K +L +R +FD +T + + +MI+ Y S
Sbjct: 146 KEVHGFVLRTGFDADVFVENALITYYS-KCYDLDLSRKVFDRMTKRDVVSWNSMISGY-S 203
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
Q +LYR+MV +PN VL++C + VH IV + E
Sbjct: 204 QGGLYEDCKTLYREMVDFSGFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDNQVEIDI 263
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
V AL+ Y++ G+ + AR+LFDEMS+++ V++ A+ISG G + + LF M
Sbjct: 264 SVCNALIGLYAKCGS-LDYARELFDEMSEKDEVTYGAIISGLMLHGYVDQSLELFRGMKT 322
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
+ + WN+VI G QN + R M + RPN VTL LS I + L+ G
Sbjct: 323 QILSTWNAVITGLVQNNRHEGVLDLVREMQ---ALGFRPNAVTLSSVLSTIAYFSSLKGG 379
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
K IH Y + G + +++ A+IDMY K G L+ A+R FD++ + L W ++I+++A+H
Sbjct: 380 KEIHSYAIKIGYHRNIYVATAIIDMYAKSGYLRGAQRVFDQSKDRSLVIWTAIISAYAVH 439
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
G + ++ +F EM++ I+PD VTF ++L AC H G+V++ F+ M K Y I+P
Sbjct: 440 GDANLALGLFHEMLK---QGIQPDPVTFTAVLAACAHCGMVDKAWEIFESMFKKYGIQPL 496
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
+EHY C+V LG+A R EA E V M IEP VWG+LL+G I + + L
Sbjct: 497 VEHYACVVGALGKARRLSEAKEFVSKMPIEPSAKVWGALLHGASISSDVELGKSVCDYLF 556
Query: 450 EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLD 509
EI+P N G +++AN+Y + G+W E +VR+ + K PG SWIE + + F + D
Sbjct: 557 EIEPENTGNYVIMANLYSQAGRWKEADEVRERMNKVGLQKIPGSSWIETSEGLRSFIATD 616
Query: 510 KTHPRTEEIYDALESMVAL 528
EEI+ L+ ++ L
Sbjct: 617 TCTENVEEIHVILKGLLGL 635
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 204/458 (44%), Gaps = 74/458 (16%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
KQL + L + N+ A KLV + K ++L +AR++FD + NT+ Y AM+ +Y+
Sbjct: 44 KQLHARLILFSVTPENYLASKLVALYS-KTNHLAFARYVFDQIPHKNTFSYNAMLISYSL 102
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES--RGTKMVHTQIVKSGFEQ 147
H A L+ + N +LKS S + K VH ++++GF+
Sbjct: 103 HNRHG-DALDLFSSLASSN--LVNNISITCLLKSLSSFTLSDVKLGKEVHGFVLRTGFDA 159
Query: 148 YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM 207
VE AL+ YS+ D+ ++RK+FD M+ R+VVSW +MISGY
Sbjct: 160 DVFVENALITYYSKC-YDLDLSRKVFDRMTKRDVVSWNSMISGY---------------- 202
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
+Q GL+ D + +R M ++ S RPN VT+V L A G T L
Sbjct: 203 ---------------SQGGLYEDCKTLYREM-VDFS-GFRPNGVTVVSVLQACGQTQDLA 245
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFA 327
G +H ++ N +++D + NALI +Y KCGSL AR FD S+K ++ ++I+
Sbjct: 246 FGMEVHKFIVDNQVEIDISVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGLM 305
Query: 328 LHGQSENSICVFEEMM----------------------------RCQDHNIRPDGVTFIS 359
LHG + S+ +F M Q RP+ VT S
Sbjct: 306 LHGYVDQSLELFRGMKTQILSTWNAVITGLVQNNRHEGVLDLVREMQALGFRPNAVTLSS 365
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
+L+ + ++ G+ K I ++D+ ++G A V K +
Sbjct: 366 VLSTIAYFSSLKGGKEIHSYAIKI-GYHRNIYVATAIIDMYAKSGYLRGAQRVFDQSK-D 423
Query: 420 PDEVVWGSLLNGCKIYGRTDFA----EFAVKKLIEIDP 453
V+W ++++ ++G + A +K+ I+ DP
Sbjct: 424 RSLVIWTAIISAYAVHGDANLALGLFHEMLKQGIQPDP 461
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 158/500 (31%), Positives = 275/500 (55%), Gaps = 18/500 (3%)
Query: 28 HLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAY 87
H ++ ++ T+ + + L T SN+ A++ FD + + +TAM+ A
Sbjct: 69 HHEEAKTLFDTMQERDLIAWTIMLTVLATF--SNIEDAKYHFDQMPERDLVAWTAMLAAN 126
Query: 88 ASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQ 147
A + +A + M P+ N F + +L + G ++ S E
Sbjct: 127 AER-GQMENARETFDQM-----PERNLFSWTSLLSA----YGRSGDVKAAGRVFDSMPEW 176
Query: 148 YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM 207
V TA++ YS SG D+ A++ FD M +R++++WTAM+S Y G ++ +F M
Sbjct: 177 NLVAWTAMLTGYSLSG-DVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRM 235
Query: 208 PDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME--VSDNIRPNQVTLVCALSAIGHTGM 265
P+RD+ +W +++A +N L ++ F RM +S + PN+VT + L A G
Sbjct: 236 PERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGA 295
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L G+ IH V G D D +SNAL++ YG+CG+L +A+ FD ++ + SW+SMI++
Sbjct: 296 LAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISA 355
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
FA G+ + ++ ++ M+ PD + FIS+L AC++ G+VE +F+ + +
Sbjct: 356 FAQRGRVDEAMELYHRML---SEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQ 412
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
+EP +EHY C+VD+LGRAG+ +A ++++ M P +++ ++L+ CK+Y + E A
Sbjct: 413 VEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAA 472
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
+ + E+DP N I LANIY + + ++RK++++R K PGCSWIEV +VH+F
Sbjct: 473 EVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEF 532
Query: 506 HSLDKTHPRTEEIYDALESM 525
+ DK HP+ +EIY ++ +
Sbjct: 533 IAGDKMHPQRDEIYAEIQRL 552
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 146/344 (42%), Gaps = 64/344 (18%)
Query: 155 LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA 214
+++ Y+RSG D+ A+ +FD M ++ SWTA++S + G + A +LFD+M +RD+ A
Sbjct: 29 MLSIYARSG-DLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQERDLIA 87
Query: 215 WNSVIAGCTQNGLFSDAISFFRRM-----------------------GMEVSDNI-RPNQ 250
W ++ DA F +M E D + N
Sbjct: 88 WTIMLTVLATFSNIEDAKYHFDQMPERDLVAWTAMLAANAERGQMENARETFDQMPERNL 147
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
+ LSA G +G ++ G V+ + + + A++ Y G + A+RAFD
Sbjct: 148 FSWTSLLSAYGRSGDVKAA----GRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDS 203
Query: 311 NSKKRLTSWNSMINSFALHGQ-------------------------------SENSICVF 339
++ L +W +M++++A +G E S +F
Sbjct: 204 MPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELF 263
Query: 340 EEMMR--CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLV 397
+ M R + P+ VTFI+LL+AC+ G + +GR + + + + LV
Sbjct: 264 DRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAER-GFDTDLVVSNALV 322
Query: 398 DLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+ GR G +A V GM+ D + W S+++ GR D A
Sbjct: 323 NFYGRCGALGDAKIVFDGMR-RRDVISWSSMISAFAQRGRVDEA 365
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
+ R+G ++ A +FD++ DRD +W +++ ++G S+A F RM R +
Sbjct: 2 FGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMP-------RWSL 54
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
+ LSA +G + K + + + D ++ + ++++A+ FD+
Sbjct: 55 GSWTALLSAFALSGHHEEAKTL----FDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQ 110
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
++ L +W +M+ + A GQ EN+ F++M + N+ ++ SLL+A G V
Sbjct: 111 MPERDLVAWTAMLAANAERGQMENARETFDQM---PERNL----FSWTSLLSAYGRSGDV 163
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL- 429
+ F M E + + ++ +G A M E D + W ++L
Sbjct: 164 KAAGRVFDSMP-----EWNLVAWTAMLTGYSLSGDVVRAKRAFDSMP-ERDLIAWTAMLS 217
Query: 430 ----NGCKIYGRTDFAEFAVKKLI 449
NG Y R F + LI
Sbjct: 218 AYAFNGHLRYTREIFQRMPERDLI 241
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 75/214 (35%), Gaps = 61/214 (28%)
Query: 294 MYGKCGSLKEARR-------------------------------AFDRNSKKRLTSWNSM 322
M+G+ G ++ AR+ FDR + L SW ++
Sbjct: 1 MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTAL 60
Query: 323 INSFALHGQSENSICVFEEMMRCQ------------------------DHNIRPDGVTFI 358
+++FAL G E + +F+ M D D V +
Sbjct: 61 LSAFALSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDLVAWT 120
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
++L A G +E R F M E + + L+ GR+G + A V M
Sbjct: 121 AMLAANAERGQMENARETFDQMP-----ERNLFSWTSLLSAYGRSGDVKAAGRVFDSMP- 174
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
E + V W ++L G + G A+ A + E D
Sbjct: 175 EWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERD 208
>gi|347954510|gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 164/455 (36%), Positives = 257/455 (56%), Gaps = 13/455 (2%)
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
T+ +T+ IT ++ A + A + DM R +P + +L C D
Sbjct: 7 TSETIVSWTSRITLL-TRSAXLAEAAKEFADM-RLAGVEPTHITFIALLSGCGDFPSGSE 64
Query: 133 T--KMVHTQIVKSGFEQ-YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
T ++H K G ++ + +V TA++ YS+ G + AR +FD M D+N V+W MI
Sbjct: 65 TLGDLLHGYACKLGLDRNHVMVGTAILGMYSKRGR-VKKARLVFDYMDDKNSVTWNTMID 123
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GY R G + NA LFD MP+ D+ +W +++ G + G +A+ +FR M + ++P+
Sbjct: 124 GYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQIS---GVKPD 180
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
V ++ AL+A + G L LG +H YV + +SN+LID+Y +CG ++ AR FD
Sbjct: 181 YVAIIAALNACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFD 240
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
+ K+ + SWNS+I FA +G + S+ F +M Q+ +P+ VTF L AC+H GL
Sbjct: 241 KMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM---QEEGFKPNAVTFTGALTACSHVGL 297
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
V++G +F+ M + Y I P+IEHYGCLVDL RAGR E+AL+VV+ M ++P+EVV GSLL
Sbjct: 298 VDEGLRFFQSMKRDYNISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLL 357
Query: 430 NGCKIYG-RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
C+ +G T AE +K L +++ + ++L+N+Y KW+ ++R+ +K
Sbjct: 358 AACRNHGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADAKWEGASRMRRKMKGLGLK 417
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K PG S IE+D H F + D H T I + LE
Sbjct: 418 KQPGFSSIEIDDCTHVFMAGDSAHVETAYIREVLE 452
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 157/386 (40%), Gaps = 86/386 (22%)
Query: 174 DEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
++ + +VSWT+ I+ TR + AA F M
Sbjct: 4 NQSTSETIVSWTSRITLLTRSAXLAEAAKEFADM-------------------------- 37
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGH--TGMLQLGKVIHGYVYRNGLDLDS-FISNA 290
R G+E P +T + LS G +G LG ++HGY + GLD + + A
Sbjct: 38 --RLAGVE------PTHITFIALLSGCGDFPSGSETLGDLLHGYACKLGLDRNHVMVGTA 89
Query: 291 LIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM-------- 342
++ MY K G +K+AR FD K +WN+MI+ + GQ N++ +F++M
Sbjct: 90 ILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMIDGYMRSGQVHNAVKLFDKMPEPDLISW 149
Query: 343 --------------------MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK-LMT 381
Q ++PD V I+ LNACT+ G + G + +M+
Sbjct: 150 TAMVNGFVKKGFHEEALVWFREMQISGVKPDYVAIIAALNACTNLGALSLGLWVHRYVMS 209
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV-WGSLLNGCKIYGRTDF 440
+ ++ ++ + L+DL R G E A EV K+E VV W S++ G G
Sbjct: 210 QDFKNNVRVSN--SLIDLYCRCGCVEFAREVFD--KMEKRTVVSWNSVIVGFAANGNAHE 265
Query: 441 AEFAVKKLIE--IDPNNGGYGIMLANIYGELGKWDE-VRKVRKMLKDRNAYKTPGCSWIE 497
+ +K+ E PN + L +G DE +R + M +D N
Sbjct: 266 SLVYFRKMQEEGFKPNAVTFTGALTAC-SHVGLVDEGLRFFQSMKRDYN----------- 313
Query: 498 VDKQVHQFHSLDKTHPRTEEIYDALE 523
+ ++ + L + R + DAL+
Sbjct: 314 ISPRIEHYGCLVDLYSRAGRLEDALK 339
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 103/245 (42%), Gaps = 48/245 (19%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + P+ +TAM+ + + H A +R+M G +P+ L +C ++
Sbjct: 137 LFDKMPEPDLISWTAMVNGFVKKGFH-EEALVWFREMQISG-VKPDYVAIIAALNACTNL 194
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
VH ++ F+ V +L++ Y R G + AR++FD+M R VVSW
Sbjct: 195 GALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGC-VEFAREVFDKMEKRTVVSW--- 250
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
NSVI G NG +++ +FR+M E +
Sbjct: 251 ----------------------------NSVIVGFAANGNAHESLVYFRKMQEE---GFK 279
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS------NALIDMYGKCGSL 301
PN VT AL+A H G+ V G + + D IS L+D+Y + G L
Sbjct: 280 PNAVTFTGALTACSHVGL-----VDEGLRFFQSMKRDYNISPRIEHYGCLVDLYSRAGRL 334
Query: 302 KEARR 306
++A +
Sbjct: 335 EDALK 339
>gi|345505234|gb|AEN99841.1| chlororespiratory reduction 4, partial [Raphanus sativus]
Length = 577
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 165/494 (33%), Positives = 269/494 (54%), Gaps = 25/494 (5%)
Query: 19 ILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L+ C+ + K Q+ FL ++ ++ + + LK L +AR +FD +
Sbjct: 99 VLKACSRLGFAKEGMQVHGFLIK-SRTWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQR 157
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
++ Y +MI Y + SA L+ M R + L + ++ +
Sbjct: 158 DSVSYNSMIDGYV-KCGLVESAGELFDLMPREKRN----------LITWNSMIGGYAQRA 206
Query: 136 VHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
+ F++ P + +++ Y + G I A+ LFD M R+VV+W MI GY
Sbjct: 207 DGVNVASKLFDEMPEKDLISWNSMIGGYVKHGR-IEDAKGLFDVMPRRDVVTWAIMIDGY 265
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
++G + A +LFD MP RDV A+NS+++G QN +A+ F M E ++ P++
Sbjct: 266 GKLGLVHQAKTLFDQMPHRDVVAYNSMMSGFVQNRYHIEALEVFNHM--EKESHLSPDET 323
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
TLV LSAI G L +H Y+ L + ALIDMY KCGS++ A R F+
Sbjct: 324 TLVIVLSAIAQLGRLTKAIDMHLYIVEKRFLLSGKLGVALIDMYSKCGSIQHAMRVFEGI 383
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K + WN+MI A+HG E++ F+ +++ + +I+PD +TF+ +LNAC+H GLV+
Sbjct: 384 ESKSIDHWNAMIGGLAVHGLGESA---FDMLLQIERRSIKPDHITFVGVLNACSHSGLVK 440
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G F+LM + ++IEP+++HYGC+VD+L R+G E A +++ M IEP++V+W + LN
Sbjct: 441 EGLLCFELMRRKHKIEPRLQHYGCMVDILARSGSIELAKNLIEEMPIEPNDVIWRTFLNA 500
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C + + E K LI N ++L+N+Y G W +VR+VR M+K++ K P
Sbjct: 501 CSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASNGMWKDVRRVRTMMKEKKIEKLP 560
Query: 492 GCSWIEVDKQVHQF 505
GCSWIE+D +VH+F
Sbjct: 561 GCSWIELDGRVHEF 574
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 36/249 (14%)
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
+D WN+VI + A+ F M + + + ++ ++ L A G + G
Sbjct: 56 KDPFLWNAVIKSHSHGADPRKALLLFCLM---LENGVLVDKFSMSLVLKACSRLGFAKEG 112
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
+HG++ ++ D F+ N LI +Y KCG L AR+ FDR ++ S+NSMI+ +
Sbjct: 113 MQVHGFLIKSRTWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKC 172
Query: 330 GQSENSICVFEEMMRCQDHNI-----------RPDGV----------------TFISLLN 362
G E++ +F+ M R + + I R DGV ++ S++
Sbjct: 173 GLVESAGELFDLMPREKRNLITWNSMIGGYAQRADGVNVASKLFDEMPEKDLISWNSMIG 232
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
G +E + F +M + + + ++D G+ G +A + M D
Sbjct: 233 GYVKHGRIEDAKGLFDVMPRR-----DVVTWAIMIDGYGKLGLVHQAKTLFDQMP-HRDV 286
Query: 423 VVWGSLLNG 431
V + S+++G
Sbjct: 287 VAYNSMMSG 295
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 156/452 (34%), Positives = 253/452 (55%), Gaps = 39/452 (8%)
Query: 80 YTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+ +IT+Y +QP +A + ++ R M + + F+ P VLK+C V ++ K +H
Sbjct: 127 WNFVITSYTKRNQPRNALNVYAQLRKM----DFEVDNFMAPSVLKACGQVSWTQLGKEIH 182
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW----TAMISGYTR 193
++K G ++ V AL+ Y + AR +FD+M +R+VVSW TA++ Y +
Sbjct: 183 GFVLKKGLDRDVFVGNALMLMYGECAC-VEYARLVFDKMMERDVVSWIPTTTALLDMYAK 241
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
G + A LF+ + + V +W ++IAGC ++ + F RM E NI PN++T+
Sbjct: 242 CGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEE---NIFPNEITM 298
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
+ + +++D ++ AL+DMY KCG + A R F
Sbjct: 299 L----------------------NKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAIS 336
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ + WN++I FA+HG E ++ +F EM R ++P+ +TFI LL+AC+H GLV +G
Sbjct: 337 RDICMWNAIITGFAMHGYGEEALDIFAEMER---QGVKPNDITFIGLLHACSHAGLVTEG 393
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
+ F+ M T+ + PQIEHYGC+VDLLGRAG +EA E++K M I+P+ +VWG+L+ C+
Sbjct: 394 KKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACR 453
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
++ E A +L+EI+P N GY ++++NIY +W + VRK +K K PG
Sbjct: 454 LHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGH 513
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
S IEV+ VH+F D++HP+ I + L M
Sbjct: 514 SVIEVNGTVHEFLMGDQSHPQIRRINEMLAEM 545
>gi|326492712|dbj|BAJ90212.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506700|dbj|BAJ91391.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 155/490 (31%), Positives = 262/490 (53%), Gaps = 14/490 (2%)
Query: 22 RCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYT 81
+C + HL+QL + L G S+ A + V FC + + YA I + PN++++
Sbjct: 41 QCATMAHLRQLHAALVKSGLSKDPIAASRAVAFCAGEGRDAAYAARIVRYHPRPNSFMWN 100
Query: 82 AMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIV 141
I A + P +A +L+ DM+R P P + +P + + + + +H ++
Sbjct: 101 TAIRALSDGPG-PDAAVALFVDMLRSPTP-PERRTFPSLFAAYARLGRADDGAALHGMVL 158
Query: 142 KSGFEQYPVVETALVNSYSRSGN-DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
K G + Y+ SG D +A LF + +VV+ + I +R G + A
Sbjct: 159 KLGLAGDAYTRNTTIAMYASSGRADEALA--LFGQCQVFDVVACNSAIVALSRAGRVDEA 216
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
++FD MP R V W+++++ ++ F DA+ F M + D + PN LV L
Sbjct: 217 RAVFDGMPSRTVATWSAMVSAYSRAARFHDAVDLFSAMQV---DGVEPNANVLVSVLGCC 273
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK---RLT 317
G L+ G +H Y+ + + +++ + AL+DMY KCGS+ +AR+ FD + + +L+
Sbjct: 274 ASLGALEQGAWVHAYIDKQDVGMNALVVIALVDMYCKCGSIHKARQVFDTSRSQGLAKLS 333
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
SWN+M+ A HGQ + ++ +F E+ + + +RPD VTFI++L A H G+ ++ +A F
Sbjct: 334 SWNAMMLGLAAHGQCQEALALFSEL---ESYGLRPDNVTFIAMLMAYGHSGMADEAKALF 390
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
M + Y + P IEHYGCLVD L RAGR EA + ++ M ++PD +WG+LL+GC+++G
Sbjct: 391 ASMAREYGVTPGIEHYGCLVDALARAGRLREAEDTIRAMPMKPDAAIWGALLSGCRLHGD 450
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
+ A + +E DP + G ++ A++ G+ VR +++ K PGCS IE
Sbjct: 451 AEAGARAARGAVECDPRDSGAYVLAASVLARDGEVGRGLGVRGKMREEGVAKVPGCSMIE 510
Query: 498 VDKQVHQFHS 507
VD VH+F S
Sbjct: 511 VDGVVHEFVS 520
>gi|345505230|gb|AEN99839.1| chlororespiratory reduction 4 [Nasturtium officinale]
Length = 614
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 173/494 (35%), Positives = 260/494 (52%), Gaps = 25/494 (5%)
Query: 19 ILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L+ C+ + LK Q+ FL G F L+ LK L +AR IFD +
Sbjct: 128 VLKACSRLGFLKGGMQIHGFLRKTGIWSDLFLQNCLIGL-YLKCGCLGFARQIFDRMPQR 186
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
++ Y +MI Y + SA L+ M R + L S ++
Sbjct: 187 DSVSYNSMIDGYI-KCGLIESARELFDLMPREMKN----------LISWNSMISGYAQTS 235
Query: 136 VHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
I F + P + +L+ Y + G + A+ LF M R+VV+W MI GY
Sbjct: 236 DGVNIASKLFAEMPEKDLISWNSLIYGYVKHGR-MEDAKDLFHVMPRRDVVTWATMIDGY 294
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
++G + A +LFD MP RDV A+NS++AG QN +A+ F ME ++ P++
Sbjct: 295 AKLGFVHKAKTLFDQMPHRDVVAYNSMMAGYVQNRHHMEALEIFS--DMEKESHLTPDET 352
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
TLV LSAI G L +H Y+ L + ALIDMY KCGS+++A F+
Sbjct: 353 TLVIVLSAIAQLGQLSKAMDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQQAMCVFEGI 412
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K + WN+MI A+HG E++ + E+ R +I PD +TF+ +LNAC+H GLV+
Sbjct: 413 ENKSIDHWNAMIGGLAIHGLGESAFNILLEIER---RSIEPDYITFVGVLNACSHSGLVK 469
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G F+LM + ++IEP+++HYGC+VDLL R G E A +++ M IEP++V+W + L
Sbjct: 470 EGLLCFELMRRKHKIEPRLQHYGCMVDLLSRCGSIELAKNLIEEMPIEPNDVIWRTFLTA 529
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C + + E K LI N ++L+N+Y G+W +VR VR M+K+R K P
Sbjct: 530 CNHHKEFEIGELVAKHLILQAGYNPSSYVLLSNMYASFGRWKDVRNVRTMMKERKLQKVP 589
Query: 492 GCSWIEVDKQVHQF 505
GCSWIE+D +VH+F
Sbjct: 590 GCSWIELDGRVHEF 603
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 215/455 (47%), Gaps = 44/455 (9%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLG-QSQTNFYAFKLVRFCTLKLSNLT-YARFIFD--H 71
++ ++ C + N + ++ + L T G +N +V F + L +AR++F H
Sbjct: 16 IIQLVGSCKNSNDVGKIHARLITTGFIKNSNLTTKIVVAFADSRRPYLAEFARYVFREYH 75
Query: 72 LTT------PNTYLYTAMITAYAS--QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
+ + + +L+ +I +++ P A F L M+ G ++F + VLK+
Sbjct: 76 VCSFAPGDVKDPFLWNLVIKSHSHGVDPRRALLWFCL---MLENG-ISVDKFSFSLVLKA 131
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
C + +G +H + K+G ++ L+ Y + G +G AR++FD M R+ VS
Sbjct: 132 CSRLGFLKGGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGC-LGFARQIFDRMPQRDSVS 190
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPD--RDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
+ +MI GY + G I++A LFD MP +++ +WNS+I+G Q SD ++ ++ E
Sbjct: 191 YNSMIDGYIKCGLIESARELFDLMPREMKNLISWNSMISGYAQT---SDGVNIASKLFAE 247
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+ + + +L+ + H M + H R D +ID Y K G +
Sbjct: 248 MPEKDLISWNSLI--YGYVKHGRMEDAKDLFHVMPRR-----DVVTWATMIDGYAKLGFV 300
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+A+ FD+ + + ++NSM+ + + ++ +F +M + + ++ PD T + +L
Sbjct: 301 HKAKTLFDQMPHRDVVAYNSMMAGYVQNRHHMEALEIFSDMEK--ESHLTPDETTLVIVL 358
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG----CLVDLLGRAGRFEEALEVVKGMK 417
+A G + + + Y +E Q G L+D+ + G ++A+ V +G++
Sbjct: 359 SAIAQLGQLSKA-----MDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQQAMCVFEGIE 413
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
+ + W +++ G I+G E A L+EI+
Sbjct: 414 NKSID-HWNAMIGGLAIHG---LGESAFNILLEIE 444
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 144/332 (43%), Gaps = 44/332 (13%)
Query: 136 VHTQIVKSGFEQYPVVETALVNSY--SRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+H +++ +GF + + T +V ++ SR AR +F E +V S+
Sbjct: 32 IHARLITTGFIKNSNLTTKIVVAFADSRRPYLAEFARYVFREY---HVCSFAP------- 81
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
GD+K D WN VI + A+ +F M + + I ++ +
Sbjct: 82 -GDVK------------DPFLWNLVIKSHSHGVDPRRALLWFCLM---LENGISVDKFSF 125
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
L A G L+ G IHG++ + G+ D F+ N LI +Y KCG L AR+ FDR +
Sbjct: 126 SLVLKACSRLGFLKGGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQ 185
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ S+NSMI+ + G E++ +F+ M R + I + + IS + G V
Sbjct: 186 RDSVSYNSMIDGYIKCGLIESARELFDLMPREMKNLISWN--SMISGYAQTSDG--VNIA 241
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
F M + I YG + + GR E+A ++ M D V W ++++G
Sbjct: 242 SKLFAEMPEKDLISWNSLIYGYV-----KHGRMEDAKDLFHVMP-RRDVVTWATMIDG-- 293
Query: 434 IYGRTDFAEFAVKKLIEIDPNNG--GYGIMLA 463
Y + F A K L + P+ Y M+A
Sbjct: 294 -YAKLGFVHKA-KTLFDQMPHRDVVAYNSMMA 323
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 161/472 (34%), Positives = 249/472 (52%), Gaps = 45/472 (9%)
Query: 53 RFCTL------KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVR 106
RFC K +L A+ +F ++ + YT+MI YA + A A L+ +M
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYARE-GLAGEAVKLFEEMEE 390
Query: 107 RGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDI 166
G P+ + VL C K VH I + ND+
Sbjct: 391 EG-ISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKE---------------------NDM 428
Query: 167 GIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNG 226
G FD + A++ Y + G ++ A +F M +D+ +WN+VI G ++N
Sbjct: 429 G-----FD------IFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNC 477
Query: 227 LFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSF 286
++A+S F + +E P++ T+ C L A G+ IHGY+ RNG D
Sbjct: 478 YANEALSLFNLLLVE--KRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH 535
Query: 287 ISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQ 346
++N+L+DMY KCG+L AR FD + K L SW MI + +HG + +I +F +M +
Sbjct: 536 VANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQM---R 592
Query: 347 DHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRF 406
I PD ++F+SLL AC+H GLV++G +F +M +IEP +EHY C+VD+L R G
Sbjct: 593 QAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNL 652
Query: 407 EEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIY 466
+A ++ M I PD +WG+LL GC+I+ AE +K+ E++P N GY +++ANIY
Sbjct: 653 SKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIY 712
Query: 467 GELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
E KW+EV+++RK + R K PGCSWIE+ +V+ F + D ++P TE+I
Sbjct: 713 AEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKI 764
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 188/449 (41%), Gaps = 77/449 (17%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMIT 85
+N +QL ++ G + N LV F LK + AR +FD +T + + ++I
Sbjct: 211 VNGGEQLHGYILKSGFGERNSVGNSLVAF-YLKNHRVDSARKVFDEMTERDVISWNSIIN 269
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
Y S A S++ M+ G + + V C D + VH VK+ F
Sbjct: 270 GYVSN-GLAEKGLSVFVQMLFSG-IEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACF 327
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
+ L++ YS+ G D+ A+ +F EMS R+VVS+T+MI+GY R G A LF+
Sbjct: 328 SREDRFCNTLLDMYSKCG-DLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
M + + I P+ T+ L+ +
Sbjct: 387 EMEE----------------------------------EGISPDVYTVTAVLNCCARNRL 412
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L GK +H ++ N + D F+SNAL+DMY KCGS++EA F K + SWN++I
Sbjct: 413 LDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGG 472
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA-YFKLMTKTY 384
++ + + ++ +F ++ + PD T +L AC ++GR + +M Y
Sbjct: 473 YSKNCYANEALSLFNLLL--VEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY 530
Query: 385 RIEPQIEHYGCLVDLLGRAGRF-------------------------------EEALEVV 413
+ + + LVD+ + G +EA+ +
Sbjct: 531 FSDRHVAN--SLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 414 KGMK---IEPDEVVWGSLLNGCKIYGRTD 439
M+ IEPDE+ + SLL C G D
Sbjct: 589 NQMRQAGIEPDEISFVSLLYACSHSGLVD 617
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 128/275 (46%), Gaps = 13/275 (4%)
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
D N+ S A++ YT GD+K A+ +FD + WN ++ ++G FS +I F++
Sbjct: 128 DSNLGSKLALM--YTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKK 185
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M +S + + T C + + G+ +HGY+ ++G + + N+L+ Y K
Sbjct: 186 M---MSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLK 242
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
+ AR+ FD +++ + SWNS+IN + +G +E + VF +M+ I D T
Sbjct: 243 NHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLF---SGIEIDLATI 299
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+S+ C L+ GRA K + L+D+ + G + A V + M
Sbjct: 300 VSVFAGCADSRLISLGRAVHCFGVKAC-FSREDRFCNTLLDMYSKCGDLDSAKVVFREMS 358
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
V + S++ G Y R A AVK E++
Sbjct: 359 -GRSVVSYTSMIAG---YAREGLAGEAVKLFEEME 389
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 95/223 (42%), Gaps = 10/223 (4%)
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
DR V N+ + ++G +A+ + VS + TL L + L+
Sbjct: 58 DRSVTDANTQLRRFCESGNLKNAVKL-----LHVSGKWDIDPRTLCSVLQLCADSKSLKD 112
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
GK + ++ NG LDS + + L MY CG LKEA R FD+ ++ WN ++N A
Sbjct: 113 GKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAK 172
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
G SI +F++MM + D TF + + + V G + K+ E
Sbjct: 173 SGDFSGSIGLFKKMM---SSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGER 229
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
LV + R + A +V M E D + W S++NG
Sbjct: 230 N-SVGNSLVAFYLKNHRVDSARKVFDEM-TERDVISWNSIING 270
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 156/461 (33%), Positives = 251/461 (54%), Gaps = 27/461 (5%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + +I Y + A +Y+ M G +P+ ++ SC
Sbjct: 135 ARKVFDESPVRDLVSWNCLINGY-KKIGEGEKAIEVYKVMESEG-VKPDDVTMIGLVSSC 192
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ + K + + +G + AL++ +S+ G DI AR++FD + R +VS
Sbjct: 193 AMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCG-DIHEARRIFDNLEKRTIVS- 250
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
LFD M ++DV WN++I G Q DA++ F+ M +
Sbjct: 251 -----------------KLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQ---TS 290
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
N P+++T++ LSA G L +G IH Y+ ++ L L+ + +L+DMY KCG++ EA
Sbjct: 291 NTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAKCGNISEA 350
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F + ++ ++I ALHG + +I F EM+ D I PD +TFI LL+AC
Sbjct: 351 LCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMI---DAGIAPDEITFIGLLSAC 407
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
HGG+++ GR YF M + + PQ++HY +VDLLGRAG EEA ++++ M +E D V
Sbjct: 408 CHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEADAAV 467
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL GC+++G E A KKL+E+DP++ G ++L +YGE W++ ++ R+M+ +
Sbjct: 468 WGALLFGCRMHGNVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNE 527
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
R K PGCS IEV+ V +F DK+ P +E+IYD L +
Sbjct: 528 RGVEKIPGCSSIEVNGIVSEFIVRDKSRPESEKIYDCLHCL 568
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 210/488 (43%), Gaps = 98/488 (20%)
Query: 46 FYAFKLVRFCTLKLSN-LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM 104
F + +L+ FC L S L Y I + PN + + I + S+ + A Y+ M
Sbjct: 11 FASSRLIAFCALSESRYLNYCVKILKGIENPNAFSWNVTIRGF-SESENPKDAVLAYKQM 69
Query: 105 VRRG--QPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRS 162
+RRG + +P+ F YP + K C D+ + M+ + K E V A ++ ++
Sbjct: 70 LRRGCCESRPDHFTYPVLFKVCADLRLNSLGHMILGHVFKLRLELVSHVHNASIHMFAS- 128
Query: 163 GNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC 222
G+++NA +FD P RD+ +WN +I G
Sbjct: 129 -------------------------------CGEMENARKVFDESPVRDLVSWNCLINGY 157
Query: 223 TQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLD 282
+ G AI ++ M S+ ++P+ VT++ +S+ G L GK + YV NGL
Sbjct: 158 KKIGEGEKAIEVYKVME---SEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLR 214
Query: 283 LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS-------------WNSMINSFALH 329
+ ++NAL+DM+ KCG + EARR FD K+ + S WN+MI
Sbjct: 215 MTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQA 274
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
+S++++ +F+EM Q N PD +T I L+AC+ G ++ G + + K + +
Sbjct: 275 KRSQDALALFQEM---QTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEK-HSLSLN 330
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMK-------------------------------- 417
+ LVD+ + G EAL V G++
Sbjct: 331 VALGTSLVDMYAKCGNISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMID 390
Query: 418 --IEPDEVVWGSLLNGC-----KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELG 470
I PDE+ + LL+ C GR F++ +K ++P Y IM+ ++ G G
Sbjct: 391 AGIAPDEITFIGLLSACCHGGMIQTGRDYFSQ--MKSRFNLNPQLKHYSIMV-DLLGRAG 447
Query: 471 KWDEVRKV 478
+E K+
Sbjct: 448 LLEEADKL 455
>gi|347954494|gb|AEP33747.1| chloroplast biogenesis 19, partial [Brassica oleracea]
Length = 485
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 173/455 (38%), Positives = 261/455 (57%), Gaps = 17/455 (3%)
Query: 73 TTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
T+ T +T+ IT + + A A+ F+ +R +PN +L C D E
Sbjct: 25 TSETTVSWTSRITLLSRNGRLAEAAKEFT----AMRLAGVEPNHITLIALLSGCADC-EP 79
Query: 131 RGTKMVHTQIVKSGFEQYPV-VETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
G + H K G ++ V V TA++ YS+ AR +FD + D+N V+W MI
Sbjct: 80 FGDSL-HGYACKLGLDRNQVMVGTAILGMYSKR-RRFRKARLVFDRVEDKNSVTWNTMID 137
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GY R G + +AA +FD MP+RD+ +W ++I G + GL +A+++FR M +VS ++P+
Sbjct: 138 GYMRSGRVDDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREM--QVS-GVKPD 194
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
V ++ AL+A + G L G +H +V + +SN+LID+Y +CG ++ AR+ FD
Sbjct: 195 YVAVIAALAACANLGALSFGLWVHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFD 254
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
K+ + SWNS+I FA +G + S+ F M Q+ +PD VTF L AC+H GL
Sbjct: 255 EMEKRTVVSWNSVIVGFAANGHAHESLVYFRRM---QEERFKPDAVTFTGALTACSHVGL 311
Query: 370 VEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
VE+G YF+ M + YRI P+IEHYGCLVDL RAGR EEAL+VV+ M ++P+EVV GSLL
Sbjct: 312 VEEGVRYFEAMKRDYRISPRIEHYGCLVDLYSRAGRLEEALKVVESMPMKPNEVVIGSLL 371
Query: 430 NGCKIYGR-TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
C+ +G T+ AE +K+L E+ ++L+N+Y G+W+ K+R+ +K
Sbjct: 372 AACRTHGNDTELAERMMKRLSELKVKGHSNYVILSNMYAADGQWEGASKMRRKMKGLGLK 431
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K PG S IE+D + H F + D H I + LE
Sbjct: 432 KQPGFSSIEIDDRTHVFMAGDSAHVENGYIREVLE 466
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/566 (30%), Positives = 286/566 (50%), Gaps = 80/566 (14%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
KQL S++ +G S L+ +K ++ A F T N L+ M+ AY
Sbjct: 334 KQLHSYVIKMGMSSDLIIEGSLLDL-YVKCFDIETAHEYFLTTETENVVLWNVMLVAYG- 391
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
Q + S ++ ++ M G PNQ+ YP +L++C + + +HTQ++KSGF+
Sbjct: 392 QLGNLSESYWIFLQMQIEG-LMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNV 450
Query: 150 VVETALVNSYSRSGNDIGIAR-------------------------------KLFDEMSD 178
V + L++ Y++ G ++ AR KLF EM +
Sbjct: 451 YVCSVLIDMYAKHG-ELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMEN 509
Query: 179 RNVVS---------------------------------------WTAMISGYTRVGDIKN 199
+ + S A++S Y R G ++
Sbjct: 510 QGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQD 569
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
A F+ + +D +WN++I+G Q+G +A+ F +M + N T A+SA
Sbjct: 570 AYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQA---GVEANLFTFGSAVSA 626
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSW 319
+T ++ GK IH + + G D ++ SN LI +Y KCGS+++A+R F +K + SW
Sbjct: 627 TANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSW 686
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
N+MI ++ HG ++ +FEEM + + P+ VTF+ +L+AC+H GLV +G +YF+
Sbjct: 687 NAMITGYSQHGYGSEAVSLFEEMKQL---GLMPNHVTFVGVLSACSHVGLVNEGLSYFRS 743
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD 439
M+K + + P+ EHY C+VDLLGRA A E ++ M IEPD ++W +LL+ C ++ +
Sbjct: 744 MSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIE 803
Query: 440 FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVD 499
EFA + L+E++P + ++L+N+Y GKWD + R+M+KDR K PG SWIEV
Sbjct: 804 IGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVK 863
Query: 500 KQVHQFHSLDKTHPRTEEIYDALESM 525
+H F D+ HP E+IY+ ++ +
Sbjct: 864 NSIHAFFVGDRLHPLAEQIYEYIDDL 889
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 172/390 (44%), Gaps = 49/390 (12%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ +F+ L ++ + AMI+ SQ A L+ M + P +++ VL +C
Sbjct: 166 AKLVFERLFLKDSVSWVAMISGL-SQNGREDEAILLFCQM-HKSAVIPTPYVFSSVLSAC 223
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ + + +H IVK G V ALV YSR W
Sbjct: 224 TKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSR----------------------W 261
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
G++ A +F M RD ++NS+I+G Q G A+ F +M + D
Sbjct: 262 ----------GNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQL---D 308
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
++P+ VT+ LSA G GK +H YV + G+ D I +L+D+Y KC ++ A
Sbjct: 309 CMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETA 368
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F + + WN M+ ++ G S +F +M Q + P+ T+ S+L C
Sbjct: 369 HEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQM---QIEGLMPNQYTYPSILRTC 425
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGC--LVDLLGRAGRFEEALEVVKGMKIEPDE 422
T G ++ G ++ T+ + Q Y C L+D+ + G + A +++ ++ E D
Sbjct: 426 TSLGALDLGE---QIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR-EEDV 481
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
V W +++ G Y + D A+K E++
Sbjct: 482 VSWTAMIAG---YTQHDLFAEALKLFQEME 508
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 200/454 (44%), Gaps = 75/454 (16%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPD- 126
+FD + + N + +I+ ++ AS L+ M+ P++ + VL++C
Sbjct: 67 LFDDIPSSNVSFWNKVISGLLAKKL-ASQVLGLFSLMITE-NVTPDESTFASVLRACSGG 124
Query: 127 VLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
+ T+ +H +I+ GF P+V L++ YS++G+
Sbjct: 125 KAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGH---------------------- 162
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
+ A +F+ + +D +W ++I+G +QNG +AI F +M +
Sbjct: 163 ----------VDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSA---V 209
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
P LSA + +LG+ +HG++ + GL ++F+ NAL+ +Y + G+L A +
Sbjct: 210 IPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQ 269
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F + ++ S+NS+I+ A G S+ ++ +FE+M Q ++PD VT SLL+AC
Sbjct: 270 IFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKM---QLDCMKPDCVTVASLLSACAS 326
Query: 367 GGLVEQGR-------------------AYFKLMTKTYRIEPQIEHY-----------GCL 396
G +G+ + L K + IE E++ +
Sbjct: 327 VGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVM 386
Query: 397 VDLLGRAGRFEEALEVVKGMKIE---PDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDP 453
+ G+ G E+ + M+IE P++ + S+L C G D E ++I+
Sbjct: 387 LVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGF 446
Query: 454 NNGGYGI-MLANIYGELGKWDEVRKVRKMLKDRN 486
Y +L ++Y + G+ D R + + L++ +
Sbjct: 447 QFNVYVCSVLIDMYAKHGELDTARGILQRLREED 480
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 125/274 (45%), Gaps = 13/274 (4%)
Query: 171 KLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSD 230
++F D V + +I Y G++ NA LFD +P +V WN VI+G L S
Sbjct: 35 RIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQ 94
Query: 231 AISFFRRMGMEVSDNIRPNQVTLVCALSAI-GHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
+ F M +++N+ P++ T L A G Q+ + IH + +G + N
Sbjct: 95 VLGLFSLM---ITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCN 151
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
LID+Y K G + A+ F+R K SW +MI+ + +G+ + +I +F CQ H
Sbjct: 152 PLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLF-----CQMHK 206
Query: 350 --IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE 407
+ P F S+L+ACT L + G + K + + + LV L R G
Sbjct: 207 SAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVK-WGLSSETFVCNALVTLYSRWGNLI 265
Query: 408 EALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
A ++ M D + + SL++G G +D A
Sbjct: 266 AAEQIFSKMH-RRDRISYNSLISGLAQRGFSDRA 298
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
IR N T + ++G L K +H ++++G D + + + LID+Y G + A
Sbjct: 6 IRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAI 65
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
+ FD ++ WN +I+ + + +F M+ N+ PD TF S+L AC+
Sbjct: 66 KLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMIT---ENVTPDESTFASVLRACS 122
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYG-------C--LVDLLGRAGRFEEALEVVKGM 416
G+A F++ T +I +I H+G C L+DL + G + A V + +
Sbjct: 123 ------GGKAPFQV---TEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERL 173
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFA 441
++ D V W ++++G GR D A
Sbjct: 174 FLK-DSVSWVAMISGLSQNGREDEA 197
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/477 (33%), Positives = 245/477 (51%), Gaps = 53/477 (11%)
Query: 96 SAFSLYRD---MVRRGQPQ-----PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQ 147
+A SL+RD + +PQ P+ + YP LKSC + +H+ + G +
Sbjct: 96 TAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDGLVLGRQIHSSTARLGLDG 155
Query: 148 YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT--------------- 192
V + ++ Y+R G A ++F+EM R+VVSW AMISG+
Sbjct: 156 NVFVAHSAISMYARCGRPDD-AYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFREL 214
Query: 193 -----------------------RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
RV DI +FD M + + +WN+++A T N +
Sbjct: 215 VALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHV 274
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
+A+ F RM D I P+ VTL L + G L LGK IH + R + + N
Sbjct: 275 EAVELFMRMQ---KDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLEN 331
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
AL+DMY CG LKEAR FD + + SW S+I+++ HG +I +FE+M
Sbjct: 332 ALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMC---GQG 388
Query: 350 IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEA 409
+ PD + F+++L AC+H GL++ G+ YF MT + I P++EHY C+VDLLGRAG EA
Sbjct: 389 LEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREA 448
Query: 410 LEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGEL 469
+ + M I+P+E VWG+LL C+I+ D A L+ + P GY ++L+NIY
Sbjct: 449 YDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARA 508
Query: 470 GKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
G+W +V VR +++ + K PG S E+ +VH FH D +HP+++ IY L ++
Sbjct: 509 GRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELL 565
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 9/233 (3%)
Query: 203 LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGH 262
+ D+ PDR +N ++ G T L DA+ F M + P+ T AL +
Sbjct: 76 VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQ-GHACFPDHYTYPLALKSCAA 134
Query: 263 TGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSM 322
T L LG+ IH R GLD + F++++ I MY +CG +A + F+ + + SWN+M
Sbjct: 135 TDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAM 194
Query: 323 INSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK 382
I+ FA G ++ VF E++ Q +PD T S+L + G + A K +
Sbjct: 195 ISGFAHAGLFGRAMDVFRELVALQ--CPKPDAGTMASILP--SMGKARVEDIALLKGVFD 250
Query: 383 TYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK---IEPDEVVWGSLLNGC 432
R + I + ++ + EA+E+ M+ IEPD V ++L C
Sbjct: 251 EMRFKGLIS-WNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSC 302
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 207/341 (60%), Gaps = 6/341 (1%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
TA+ + Y+R+ +I++A LFD ++ + +WN++I+G QNGL AIS F+ M
Sbjct: 347 TALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQ---KC 403
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+RPN VT+ LSA G L LGK +H + R + + F+S ALIDMY KCGS+ EA
Sbjct: 404 EVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEA 463
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+R F +K +WN+MI+ + LHG ++ +F EM+ + + P GVTF+S+L AC
Sbjct: 464 QRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSR---VSPTGVTFLSVLYAC 520
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLV +G F+ M + EP EHY C+VDLLGRAG ++AL+ ++ M +EP V
Sbjct: 521 SHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPV 580
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL C I+ + A A KL E+DP N GY ++L+NIY + E VR ++K
Sbjct: 581 WGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKR 640
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
R KTPGC+ IEV +H F S D++HP+ IY LE +
Sbjct: 641 RKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKL 681
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 173/385 (44%), Gaps = 48/385 (12%)
Query: 55 CTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQ 114
C K S + AR +FD + +T L+ M++ A ++ DMV+ G
Sbjct: 150 CYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCF-DEAILIFGDMVKGGI----G 204
Query: 115 FIYPHVLKSCPDVLESRGTKM---VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
F V P V E + + + +K GF + V T L YS+
Sbjct: 205 FDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSK---------- 254
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
G+I+ A LF + D+ ++N++I+G T N +
Sbjct: 255 ----------------------CGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESS 292
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
+ F+ + + + V L+ GH L L + IHG+ ++G+ +S +S AL
Sbjct: 293 VRLFKELLVSGEKVNSSSIVGLIPVFFPFGH---LHLTRCIHGFCTKSGVVSNSSVSTAL 349
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIR 351
+Y + ++ AR FD +S+K L SWN+MI+ +A +G +E +I +F+EM +C+ +R
Sbjct: 350 TTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCE---VR 406
Query: 352 PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALE 411
P+ VT S+L+AC G + G+ L+ + E I L+D+ + G EA
Sbjct: 407 PNPVTVTSILSACAQLGALSLGKWVHDLINRE-SFESNIFVSTALIDMYAKCGSITEAQR 465
Query: 412 VVKGMKIEPDEVVWGSLLNGCKIYG 436
+ M E + V W ++++G ++G
Sbjct: 466 LFSMMP-EKNAVTWNAMISGYGLHG 489
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 109/511 (21%), Positives = 206/511 (40%), Gaps = 89/511 (17%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTY---ARFIFDHLT 73
L ++ R + ++ L Q + + G KL T KLS+L A +F +
Sbjct: 14 LTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKL----THKLSHLKAIDQASLLFSTIP 69
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
P+ +LY +I A++ + SSA SLY + + +P+ F Y V+
Sbjct: 70 NPDLFLYNVLIRAFSLNNS-PSSAVSLYTHLRKSTPLEPDNFTYAFVISG---ASSLGLG 125
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
++H + +GF G+D+ + +A+++ Y +
Sbjct: 126 LLLHAHSIVAGF-----------------GSDLFVG---------------SAIVACYFK 153
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
+ A +FD M +RD WN++++G +N F +AI F M V I + T+
Sbjct: 154 FSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDM---VKGGIGFDSTTV 210
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
L + L LG I + G +++ L +Y KCG ++ AR F + +
Sbjct: 211 AAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQ 270
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL--------LNACT 365
L S+N+MI+ + + ++E+S+ +F+E++ + V I + L C
Sbjct: 271 PDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCI 330
Query: 366 HG------------------------GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLG 401
HG +E R F + E + + ++
Sbjct: 331 HGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESS-----EKSLASWNAMISGYA 385
Query: 402 RAGRFEEALEVVKGMK---IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI--EIDPNNG 456
+ G E+A+ + + M+ + P+ V S+L+ C G ++ V LI E +N
Sbjct: 386 QNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKW-VHDLINRESFESNI 444
Query: 457 GYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
L ++Y + G E +++ M+ ++NA
Sbjct: 445 FVSTALIDMYAKCGSITEAQRLFSMMPEKNA 475
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 38/248 (15%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+L+ + AR +FD + + + AMI+ YA Q A SL+++M ++ + +PN
Sbjct: 355 RLNEIESARLLFDESSEKSLASWNAMISGYA-QNGLTEKAISLFQEM-QKCEVRPNPVTV 412
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+L +C + K VH I + FE
Sbjct: 413 TSILSACAQLGALSLGKWVHDLINRESFES------------------------------ 442
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
N+ TA+I Y + G I A LF MP+++ WN++I+G +G +A++ F
Sbjct: 443 --NIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNE 500
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG-KVIHGYVYRNGLDLDSFISNALIDMYG 296
M + + P VT + L A H G+++ G ++ V+ +G + ++D+ G
Sbjct: 501 M---LHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLG 557
Query: 297 KCGSLKEA 304
+ G+L +A
Sbjct: 558 RAGNLDKA 565
>gi|226530385|ref|NP_001145846.1| CRR4 [Zea mays]
gi|219884683|gb|ACL52716.1| unknown [Zea mays]
gi|414878658|tpg|DAA55789.1| TPA: CRR4 [Zea mays]
Length = 601
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/484 (33%), Positives = 270/484 (55%), Gaps = 18/484 (3%)
Query: 46 FYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMV 105
F LV F K N+ A F+ + + +IT Y S+ A L+ M
Sbjct: 114 FVQTALVDFYA-KNGNMDSAVMAFEEMPIKDPIPMNCLITGY-SRSGDVEEARRLFDSMP 171
Query: 106 RRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGND 165
R+ N I + E + + Q+++ G + T + + +++G D
Sbjct: 172 RKTSASWNSMIACYAHGG-----EFQEALTLFDQMLREGASPNAITITTVFSICAKTG-D 225
Query: 166 IGIARKLFDEMSD---RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC 222
+ R+ +S+ +NV+ TA++ Y + I A FD MP RDV AW+++IAG
Sbjct: 226 LETGRRAKAWVSEEDLQNVIVHTALMEMYVKCRAIDEARREFDRMPRRDVVAWSTMIAGY 285
Query: 223 TQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLD 282
+ NG +++ F RM + N +PN+VTLV LSA G +LG+ I Y+ L
Sbjct: 286 SHNGRPHESLELFERMK---ATNCKPNEVTLVGVLSACAQLGSDELGEQIGSYIESQTLP 342
Query: 283 LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM 342
L S++ +ALIDMY KCG + AR F R +K + +WNSMI AL+G +E++I ++ EM
Sbjct: 343 LTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNGFAEDAIALYGEM 402
Query: 343 MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR-IEPQIEHYGCLVDLLG 401
+ ++P+ +TF++LL ACTH GLV++G A+F+ M K + PQ+EH C+VDLL
Sbjct: 403 V---GDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNKQHASPQVEHCACIVDLLC 459
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIM 461
++GR EA + + M++EP+ V+W +LL+ C+ + + A+ A KL+ ++PN+ ++
Sbjct: 460 KSGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVELAKLAAGKLVVLEPNSSSIYVL 519
Query: 462 LANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDA 521
L+NIY + G W +VR++R +++ +N K SWIE+D +VH+F D HPR+ EIY+
Sbjct: 520 LSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELDGEVHRFLVQDTYHPRSAEIYNV 579
Query: 522 LESM 525
++ +
Sbjct: 580 VDGL 583
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 197/392 (50%), Gaps = 37/392 (9%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMV-------RRGQPQPNQFIY 117
AR +FD + P L A ++ S SL+++++ RRG P+ I
Sbjct: 31 ARHLFDAVPRPTAALCCAFVSVL--------SKLSLHQELIEAVSSLHRRGGAIPSGCI- 81
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
P VLKSC S H + G V+TALV+ Y+++GN + A F+EM
Sbjct: 82 PLVLKSCALSAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGN-MDSAVMAFEEMP 140
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
++ + +I+GY+R GD++ A LFDSMP + +WNS+IA G F +A++ F +
Sbjct: 141 IKDPIPMNCLITGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQ 200
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M + + PN +T+ S TG L+ G+ +V L + + AL++MY K
Sbjct: 201 M---LREGASPNAITITTVFSICAKTGDLETGRRAKAWVSEEDLQ-NVIVHTALMEMYVK 256
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
C ++ EARR FDR ++ + +W++MI ++ +G+ S+ +FE M + N +P+ VT
Sbjct: 257 CRAIDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFERM---KATNCKPNEVTL 313
Query: 358 ISLLNACTHGG---LVEQGRAYFKLMTKTYRIEPQIEHYG-CLVDLLGRAGRFEEALEVV 413
+ +L+AC G L EQ +Y + T P + G L+D+ + G A +V
Sbjct: 314 VGVLSACAQLGSDELGEQIGSYIESQTL-----PLTSYLGSALIDMYTKCGHVARARDVF 368
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
M+ + + W S++ G + G FAE A+
Sbjct: 369 HRME-QKVVIAWNSMIRGLALNG---FAEDAI 396
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/350 (39%), Positives = 221/350 (63%), Gaps = 7/350 (2%)
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
++++ A++ Y ++ +I+ A +FDSMP +D +WN++I G QNGL ++A+ R
Sbjct: 305 DIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVE--RYGH 362
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
M+ + ++ Q T V L A H G LQ G +H + GL++D ++ LID+Y KCG
Sbjct: 363 MQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCG 422
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
L EA F++ ++ WN++I+ +HG ++ +F M Q I+PD VTF+S
Sbjct: 423 KLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRM---QQEGIKPDHVTFVS 479
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
LL AC+H GLV+QGR++F +M TY I P +HY C+ D+LGRAG+ +EA ++ M I+
Sbjct: 480 LLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIK 539
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVR 479
PD VWG+LL C+I+G + + A + L E+DP N GY ++++N+Y ++GKWD V +VR
Sbjct: 540 PDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVR 599
Query: 480 KMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKT--HPRTEEIYDALESMVA 527
+++ +N KTPG S IEV + V+ F+S ++T HP+ EEI L S++A
Sbjct: 600 SLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLA 649
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 207/484 (42%), Gaps = 83/484 (17%)
Query: 31 QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQ 90
QL + LG + + + + L+ ++ A +FD ++ + + AM++
Sbjct: 88 QLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRN 147
Query: 91 PAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPV 150
A A+ A L+ MV G + VL C + + ++H VK G
Sbjct: 148 -ARAAEAVGLFGRMVGEGVAG-DTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGL----- 200
Query: 151 VETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR 210
D+ + A+I Y ++G ++ A +F M R
Sbjct: 201 ---------------------------DKELFVCNALIDVYGKLGMLEEAQCVFHGMECR 233
Query: 211 DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK 270
D+ WNS+I+GC Q G + A+ F+ GM S + P+ +TLV SAI G + K
Sbjct: 234 DLVTWNSIISGCEQRGQTAAALKMFQ--GMRGS-GVSPDVLTLVSLASAIAQGGDGRSAK 290
Query: 271 VIHGYVYRNGLDLDSFIS-NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
+H YV R G D+D I+ NA++DMY K +++ A+R FD + SWN++I + +
Sbjct: 291 SLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQN 350
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
G + ++ + M + + ++ TF+S+L A +H G ++QG ++ + +I
Sbjct: 351 GLANEAVERYGHMQKHE--GLKAIQGTFVSVLPAYSHLGALQQG---MRMHALSIKIGLN 405
Query: 390 IEHY--GCLVDLLGRAGRFEEALEVVKGMK------------------------------ 417
++ Y CL+DL + G+ EA+ + + M
Sbjct: 406 VDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRM 465
Query: 418 ----IEPDEVVWGSLLNGCKIYGRTDFAE--FAVKKLI-EIDPNNGGYGIMLANIYGELG 470
I+PD V + SLL C G D F V ++ +I P Y M A++ G G
Sbjct: 466 QQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACM-ADMLGRAG 524
Query: 471 KWDE 474
+ DE
Sbjct: 525 QLDE 528
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 178/376 (47%), Gaps = 48/376 (12%)
Query: 83 MITAYASQPAHASSAFSLYRDMVRRGQP-QPNQFIYPHVLKSCPDVLESRGTKMVHTQIV 141
+I A+ S+ A AF L R ++ P +P+ F +P ++++ P + +H +
Sbjct: 39 LIAAF-SRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAP---SNASAAQLHACAL 94
Query: 142 KSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAA 201
+ +G+ R +V + +++ Y R G I A
Sbjct: 95 R-----------------------LGLVRP--------SVFTSGSLVHAYLRFGRISEAY 123
Query: 202 SLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIG 261
+FD M +RDVPAWN++++G +N ++A+ F RM V + + + VT+ L
Sbjct: 124 KVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRM---VGEGVAGDTVTVSSVLPMCV 180
Query: 262 HTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNS 321
G L V+H Y ++GLD + F+ NALID+YGK G L+EA+ F + L +WNS
Sbjct: 181 LLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNS 240
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA-YFKLM 380
+I+ GQ+ ++ +F+ M + + PD +T +SL +A GG ++ + +M
Sbjct: 241 IISGCEQRGQTAAALKMFQGM---RGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVM 297
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+ + ++ I +VD+ + E A + M ++ D V W +L+ G Y +
Sbjct: 298 RRGWDVDDIIAG-NAIVDMYAKLSNIEAAQRMFDSMPVQ-DSVSWNTLITG---YMQNGL 352
Query: 441 AEFAVKKLIEIDPNNG 456
A AV++ + + G
Sbjct: 353 ANEAVERYGHMQKHEG 368
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 101/241 (41%), Gaps = 8/241 (3%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
K L ++ G + A + KLSN+ A+ +FD + ++ + +IT Y
Sbjct: 290 KSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYM- 348
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
Q A+ A Y M + + Q + VL + + + +H +K G
Sbjct: 349 QNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDV 408
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
V T L++ Y++ G + A LF++M R+ W A+ISG G A +LF M
Sbjct: 409 YVGTCLIDLYAKCGK-LAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQ 467
Query: 210 RDVP----AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
+ + S++A C+ GL SFF M+V+ +I P C +G G
Sbjct: 468 EGIKPDHVTFVSLLAACSHAGLVDQGRSFFDV--MQVTYDIVPIAKHYACMADMLGRAGQ 525
Query: 266 L 266
L
Sbjct: 526 L 526
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKL 379
N++I +F+ + + ++ C + RPDG TF SL+ A Q A
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCA-YPFRPDGFTFPSLIRAAPSNASAAQLHA---C 92
Query: 380 MTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ + P + G LV R GR EA +V M E D W ++L+G
Sbjct: 93 ALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMS-ERDVPAWNAMLSG 143
>gi|414871822|tpg|DAA50379.1| TPA: hypothetical protein ZEAMMB73_401482 [Zea mays]
Length = 522
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/490 (31%), Positives = 265/490 (54%), Gaps = 14/490 (2%)
Query: 22 RCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYT 81
RC + HL+QL + L G ++ A + V FC ++ YA + H PN++++
Sbjct: 43 RCVSMAHLRQLHAALVKSGLAKDPIAASRAVAFCAGPGRDVLYAERLVRHHPRPNSFMWN 102
Query: 82 AMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIV 141
+I A S A +A +L+ DM+ P P++ +P +L + + + + +H +
Sbjct: 103 TVIRAL-SDGARPDAAVALFVDMLSSPTP-PDRRSFPSLLAAYARLGRAGDGEALHGMAL 160
Query: 142 KSGFEQYPVVETALVNSYSRSGN-DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
K G V A + Y+ G D +A LF + + +VV+ ++I R G + A
Sbjct: 161 KLGLAGDAYVRNATIAMYASCGRADEALA--LFGQCPELDVVACNSVIVALARAGRVDEA 218
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
S+FD+MP+R V W+++++ + S+A++ F M +D + PN LV L
Sbjct: 219 RSVFDAMPERTVATWSAMVSAYARAARCSEALALFSAM---QADGMEPNANVLVSVLGCC 275
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK---RLT 317
G L G +H Y+ R+G+ +++ + AL+DMY KCGS+ +AR+ FD + +L+
Sbjct: 276 ASLGALVQGAWVHEYIDRHGVAMNALVVTALVDMYCKCGSVDDARQVFDAARSQGLAKLS 335
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
SWNSM+ A+HGQ ++ +F E+ + + + PD VTFI++L A H G+ ++ +A F
Sbjct: 336 SWNSMMQGLAVHGQWREAVALFSEL---KSYGLSPDNVTFIAVLTAYGHSGMPDEAQAAF 392
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
M+ + +EP IEHYGCLVD L RAGR EA + ++ M + PD +WG+LL+GC+++G
Sbjct: 393 ASMSSEHGVEPGIEHYGCLVDALARAGRLREAEDAIRAMPMAPDAAIWGALLSGCRLHGD 452
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
+ A ++ + DP + G ++ A++ G +R +++ K PG S IE
Sbjct: 453 AELGARAAREAVRCDPRDSGAYVLAASVLARGGDPGRGAGIRGRMREAGVGKVPGSSMIE 512
Query: 498 VDKQVHQFHS 507
V+ VH+F S
Sbjct: 513 VNGVVHEFVS 522
>gi|186478293|ref|NP_172391.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099767|sp|O80488.1|PPR23_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09190
gi|3249103|gb|AAC24086.1| Contains similarity to membrane-associated salt-inducible protein
homolog TM021B04.10 gb|2191192 from A. thaliana BAC
gb|AF007271 [Arabidopsis thaliana]
gi|28393182|gb|AAO42022.1| unknown protein [Arabidopsis thaliana]
gi|332190289|gb|AEE28410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 484
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/486 (32%), Positives = 267/486 (54%), Gaps = 10/486 (2%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDH 71
+ +++L +L N L ++ + L +N + C LSN YA +F H
Sbjct: 3 IERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICG-SLSNSDYANRVFSH 61
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ PN ++ AMI Y S + S + M RG +++ Y +LKSC + + R
Sbjct: 62 IQNPNVLVFNAMIKCY-SLVGPPLESLSFFSSMKSRG-IWADEYTYAPLLKSCSSLSDLR 119
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
K VH +++++GF + + +V Y+ SG +G A+K+FDEMS+RNVV W MI G+
Sbjct: 120 FGKCVHGELIRTGFHRLGKIRIGVVELYT-SGGRMGDAQKVFDEMSERNVVVWNLMIRGF 178
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
GD++ LF M +R + +WNS+I+ ++ G +A+ F M + P++
Sbjct: 179 CDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEM---IDQGFDPDEA 235
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSF-ISNALIDMYGKCGSLKEARRAFDR 310
T+V L G+L GK IH +GL D + NAL+D Y K G L+ A F +
Sbjct: 236 TVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRK 295
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
++ + SWN++I+ A++G+ E I +F+ M+ ++ + P+ TF+ +L C++ G V
Sbjct: 296 MQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMI--EEGKVAPNEATFLGVLACCSYTGQV 353
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
E+G F LM + +++E + EHYG +VDL+ R+GR EA + +K M + + +WGSLL+
Sbjct: 354 ERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLS 413
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
C+ +G AE A +L++I+P N G ++L+N+Y E G+W +V KVR ++K K+
Sbjct: 414 ACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKS 473
Query: 491 PGCSWI 496
G S I
Sbjct: 474 TGQSTI 479
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/477 (34%), Positives = 247/477 (51%), Gaps = 58/477 (12%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI- 116
K ++ AR +F + P+ Y AMI+ + + S L+R+++ G+ + I
Sbjct: 256 KCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSV-KLFRELLFSGERVSSSTIV 314
Query: 117 --------YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGI 168
+ H+ +C +H VKSG P V TA Y++ N+I +
Sbjct: 315 GLIPLHSPFGHLHLACS----------IHGFCVKSGIILNPTVSTAFTAIYNKL-NEIDL 363
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
AR L FD P++ V AWN++I+G TQNG
Sbjct: 364 ARHL-------------------------------FDESPEKTVVAWNAMISGYTQNGST 392
Query: 229 SDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS 288
AIS F+ M + PN VT+ LSA G L GK +H + L+ + ++S
Sbjct: 393 ETAISLFKEM---MKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVS 449
Query: 289 NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDH 348
AL+DMY KCG++ EA + FD S+K +WN+MI + LHG ++ ++ EM+
Sbjct: 450 TALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHL--- 506
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
P VTF+S+L AC+H GLV +G F M YRIEP IEHY C+VD+LGR+G+ E+
Sbjct: 507 GYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEK 566
Query: 409 ALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGE 468
ALE +K M +EP VWG+LL C I+ TD A A ++L E+DP + GY ++L+NIY
Sbjct: 567 ALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSV 626
Query: 469 LGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ + +R+++K R K+PGC+ IEV+ H F S D++H +IY LE +
Sbjct: 627 ERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKL 683
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 183/415 (44%), Gaps = 45/415 (10%)
Query: 23 CNHINHLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDHLTTPNTYLYT 81
C++ HL L + G F LV +C K S + YAR +FD + +T L+
Sbjct: 121 CSNDKHLMLLHAHSIIDGYGSNVFVGSALVDLYC--KFSRVVYARKVFDGMPERDTVLWN 178
Query: 82 AMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIV 141
MI S L+R+MV G + + VL + ++ E + + +
Sbjct: 179 TMINGLVKNCCFDDS-IQLFREMVADGVRVDSSTVTA-VLPAAAELQELKVGMGIQCLAL 236
Query: 142 KSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAA 201
K GF V T L IS Y++ GD+ A
Sbjct: 237 KIGFGFCDYVLTGL--------------------------------ISLYSKCGDVNTAR 264
Query: 202 SLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIG 261
LF + D+ A+N++I+G T NG ++ FR + V L+ S G
Sbjct: 265 LLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFG 324
Query: 262 HTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNS 321
H L L IHG+ ++G+ L+ +S A +Y K + AR FD + +K + +WN+
Sbjct: 325 H---LHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNA 381
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
MI+ + +G +E +I +F+EMM+ + P+ VT ++L+AC G + G+ L+
Sbjct: 382 MISGYTQNGSTETAISLFKEMMKTE---FTPNAVTITTILSACAQLGSLSFGKWVHHLI- 437
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
K+ +EP I LVD+ + G EA ++ M E + V W +++ G ++G
Sbjct: 438 KSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMS-EKNTVTWNTMIFGYGLHG 491
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/509 (23%), Positives = 210/509 (41%), Gaps = 85/509 (16%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-----LSNLTYARFIFD 70
+ +++ + + HL Q T Q N Y F L L S +AR +F
Sbjct: 15 LFSLINKASTFPHLAQ------THAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFF 68
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ P+ +L+ ++ ++ + SS+ SLY + R P+ F Y + +C +
Sbjct: 69 SVPKPDIFLFNVLVRGFSLNDS-PSSSISLYTHLRRNTNLSPDNFTYAFAVAACSN---D 124
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
+ ++H + G+ V +ALV+ Y +
Sbjct: 125 KHLMLLHAHSIIDGYGSNVFVGSALVDLYCK----------------------------- 155
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
++RV A +FD MP+RD WN++I G +N F D+I FR M V+D +R +
Sbjct: 156 FSRV---VYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREM---VADGVRVDS 209
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
T+ L A L++G I + G ++ LI +Y KCG + AR F R
Sbjct: 210 STVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRR 269
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMM----RCQDHNIR---PDGVTFISLLNA 363
++ L ++N+MI+ F +G +E S+ +F E++ R I P F L A
Sbjct: 270 INRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLA 329
Query: 364 CT-HGGLVEQG--------RAYFKLMTKTYRI-----------EPQIEHYGCLVDLLGRA 403
C+ HG V+ G A+ + K I E + + ++ +
Sbjct: 330 CSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQN 389
Query: 404 GRFEEALEVVKGM---KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE---IDPNNGG 457
G E A+ + K M + P+ V ++L+ C G F ++ V LI+ ++PN
Sbjct: 390 GSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKW-VHHLIKSENLEPNI-Y 447
Query: 458 YGIMLANIYGELGKWDEVRKVRKMLKDRN 486
L ++Y + G E ++ + ++N
Sbjct: 448 VSTALVDMYAKCGNISEAWQLFDSMSEKN 476
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/426 (35%), Positives = 241/426 (56%), Gaps = 37/426 (8%)
Query: 132 GTKMVHTQIVKSGFEQYPV-VETALVNSYSRSG--------------------------- 163
G +H + +KSGF + V TALV +Y+++G
Sbjct: 57 GAASLHARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAY 116
Query: 164 ---NDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIA 220
++ AR++FD M +R++VSW MI GY G++ A +F+ M DRD +W+S+++
Sbjct: 117 VTRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMS 176
Query: 221 GCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG 280
T+ DA+ +R M + P+ T+V LSA G L +G +H +V NG
Sbjct: 177 AYTKGRRSKDALELWREMRAAC---VNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNG 233
Query: 281 LDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFE 340
++LD + ALIDMY KCG ++ + R F K + +W+SMI A HG +++ +F
Sbjct: 234 VELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFS 293
Query: 341 EMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLL 400
M+ ++P+ VTFI +L +CTH GLV G+ YF M+ + + P+++HYGC+VDLL
Sbjct: 294 RML---SEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLL 350
Query: 401 GRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGI 460
GR+G EEA ++++ M EPD V+W +LL C+IY + AE A+ KL +DP+ G+ +
Sbjct: 351 GRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDPHADGHYV 410
Query: 461 MLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYD 520
+L+NIY + W+ V ++R+ L+ + PG S IE +H+F S D++HPR++EIY
Sbjct: 411 LLSNIYAQANSWEGVAEMRRTLRRERIQRIPGRSSIEWQNTIHEFISGDRSHPRSKEIYK 470
Query: 521 ALESMV 526
L M+
Sbjct: 471 MLGEMM 476
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 260/459 (56%), Gaps = 22/459 (4%)
Query: 68 IFDHLTTPNTYLYTAMITA--YASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
+FD L + + +++TA +++P A S+ R ++ G P+ F++ ++K+C
Sbjct: 60 LFDALPRRDPVAWASLLTACNLSNRP---HRALSISRSLLSTGF-HPDHFVFASLVKACA 115
Query: 126 D--VLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSG-NDIGIARKLFDEMSDRNVV 182
+ VL + K VH + S F VV+++L++ Y++ G D G R +FD +S N +
Sbjct: 116 NLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYG--RAVFDSISSLNSI 173
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF---RRMG 239
SWT MISGY R G A LF P R++ AW ++I+G Q+G DA F R G
Sbjct: 174 SWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEG 233
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
+ V+D + + V CA + + +LGK +HG V G + FISNALIDMY KC
Sbjct: 234 ISVTDPLVLSSVVGACA-----NLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCS 288
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
L A+ F +K + SW S+I A HGQ+E ++ +++EM+ ++P+ VTF+
Sbjct: 289 DLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLA---GVKPNEVTFVG 345
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
L++AC+H GLV +GR F+ M + + I P ++HY CL+DL R+G +EA +++ M +
Sbjct: 346 LIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVN 405
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVR 479
PDE W +LL+ CK +G T A L+ + P + I+L+NIY G W++V KVR
Sbjct: 406 PDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPEDPSSYILLSNIYAGAGMWEDVSKVR 465
Query: 480 KMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
K++ A K PG S I++ K H F++ + +HP +EI
Sbjct: 466 KLMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHPMRDEI 504
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 153/417 (36%), Gaps = 104/417 (24%)
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
K +H QI+K+G Q+ + L+N+Y + G
Sbjct: 22 AKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGL---------------------------- 53
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
I++A LFD++P RD AW S++ C + A+S R + +S P+
Sbjct: 54 ----IQDALQLFDALPRRDPVAWASLLTACNLSNRPHRALSISRSL---LSTGFHPDHFV 106
Query: 253 LVCALSAIGHTGMLQL--GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
+ A + G+L + GK +H + + D + ++LIDMY K G R FD
Sbjct: 107 FASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDS 166
Query: 311 NSKKRLTSWNSMINSFALHG----------------------------QSENSICVFEEM 342
S SW +MI+ +A G QS N + F
Sbjct: 167 ISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLF 226
Query: 343 MRCQDHNIR-PDGVTFISLLNACTHGGLVEQGRAYFKLMTK------TYRIEPQIEHYGC 395
+ + I D + S++ AC + L E G+ ++ + I+ Y
Sbjct: 227 VEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAK 286
Query: 396 LVDLL------------------------GRAGRFEEALEVVKGM---KIEPDEVVWGSL 428
DL+ + G+ EEAL + M ++P+EV + L
Sbjct: 287 CSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGL 346
Query: 429 LNGCKIYGRTDFAEFAVKKLIE---IDPNNGGYGIMLANIYGELGKWDEVRK-VRKM 481
++ C G + ++E I P+ Y +L +++ G DE +R M
Sbjct: 347 IHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLL-DLFSRSGHLDEAENLIRTM 402
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 83/173 (47%), Gaps = 9/173 (5%)
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFA 327
L K +H + + GL+ I N L++ YGKCG +++A + FD ++ +W S++ +
Sbjct: 21 LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACN 80
Query: 328 LHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL--VEQGR-AYFKLMTKTY 384
L + ++ + ++ H PD F SL+ AC + G+ V+QG+ + + +
Sbjct: 81 LSNRPHRALSISRSLLSTGFH---PDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPF 137
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
+ ++ L+D+ + G + V + + + W ++++G GR
Sbjct: 138 SDDDVVK--SSLIDMYAKFGLPDYGRAVFDSIS-SLNSISWTTMISGYARSGR 187
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 170/520 (32%), Positives = 269/520 (51%), Gaps = 42/520 (8%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYAR-- 66
++ + Q L IL+ CN + L QL + + LG Q N + L + YA
Sbjct: 3 HRAVEQPCLDILQACNTLPKLAQLHTHIIKLG-FQNNPLVLTKFTSASSNLDAIPYAMSL 61
Query: 67 -FIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
F + + +L++ +I AYA +A Y M+ G PN++ +P VLK+C
Sbjct: 62 VFSVEDARVYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGI-SPNKYAFPFVLKACA 120
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
+ + K VH +VK GF+ V+ +V+ Y + ARKLF
Sbjct: 121 GLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLF------------ 168
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
D MP D W ++I G + G + A+ FR+M +
Sbjct: 169 -------------------DEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIA---G 206
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
+ P+ VT+V LSA G L+LGK I Y+ + + +SNAL+DM+ KCG + +A
Sbjct: 207 VCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKAL 266
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
F SK+ + SW S+I A+HG+ ++ +FEEM + + P+ + FI LL+AC+
Sbjct: 267 GLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEM---KASGMVPEDIAFIGLLSACS 323
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
H GLVE+GR YF MT+ + I P+IEHYGC+VDLL RAG EALE V+ M IEP+ ++W
Sbjct: 324 HSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIW 383
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
+L++ C+++G E K+LI +P + ++L+NIYG++ W++ K+R + +
Sbjct: 384 RTLISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKK 443
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PG + IE+D ++H+F D++H + EI + M
Sbjct: 444 GIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEM 483
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 214/341 (62%), Gaps = 6/341 (1%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
TA+ + Y R+ ++ A LFD ++ + +WN++I+GCTQNGL AIS F+ M +
Sbjct: 171 TALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQ---KN 227
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
N+ PN VT+ LSA G L LG+ +H + N + + ++S ALIDMY KCGS+ A
Sbjct: 228 NVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVA 287
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R FD +K +WN+MI+ + LHG + ++ +F +M+ +++P G+TF+S+L AC
Sbjct: 288 RELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDML---SSSVKPTGLTFLSVLYAC 344
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLV++G F M + EP EHY C+VD+LGRAG+ ++ALE +K M +EP V
Sbjct: 345 SHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPV 404
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
WG+LL C I+ T+ A A +KL E+DP N GY ++++NIY K+ + VR++ K
Sbjct: 405 WGALLGACMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKK 464
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ KTPGC+ IE+ + H F S D++HP+++ IY L+ +
Sbjct: 465 KRLAKTPGCTLIEIGQVPHVFTSGDQSHPQSKAIYAELDKL 505
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 128/301 (42%), Gaps = 35/301 (11%)
Query: 218 VIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVY 277
+I+G +N F D+I F M + + R + T++ L A+ L+LG I
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVL--GNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAI 58
Query: 278 RNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSIC 337
+ G + LI ++ KCG ++ AR F KK L S N+MI+ F +G++E+S+
Sbjct: 59 KCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVR 118
Query: 338 VFEEMMRCQDHNIRPDGVTFI--------SLLNACTHG-----GLVEQGRAYFKLMTKTY 384
+F+E++ + V I S L C HG G+V L T
Sbjct: 119 LFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYC 178
Query: 385 RI--------------EPQIEHYGCLVDLLGRAGRFEEALEVVKGMK---IEPDEVVWGS 427
R+ E + + ++ + G + A+ + + M+ + P+ V S
Sbjct: 179 RLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTS 238
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEID--PNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
+L+ C G E+ V LI+ + +N L ++Y + G R++ ++ ++
Sbjct: 239 ILSACAQIGALSLGEW-VHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEK 297
Query: 486 N 486
N
Sbjct: 298 N 298
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/506 (32%), Positives = 271/506 (53%), Gaps = 40/506 (7%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
+L + + ++ + +Q+ ++ S F L+ K ++ A+ IF
Sbjct: 340 SSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALID-AYFKCRGVSMAQKIFSQCN 398
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
+ + ++TAMI+ Y + A ++R +V+ + PN+ +L +L +
Sbjct: 399 SVDVVVFTAMISGYLHNGLNID-ALEMFRWLVKV-KISPNEITLVSILPVIGGLLALKLG 456
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+ +H I+K GF+ + A+++ Y++ G + +A ++F +S R++VSW
Sbjct: 457 RELHGFIIKKGFDNRCNIGCAVIDMYAKCGR-MNLAYEIFGRLSKRDIVSW--------- 506
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
NS+I C Q+ S AI FR+MG+ I + V++
Sbjct: 507 ----------------------NSMITRCAQSDNPSAAIDIFRQMGVS---GICFDCVSI 541
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
ALSA + GK IHG++ ++ L LD + + LIDMY KCG+LK A FD +
Sbjct: 542 SAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKE 601
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K + SWNS+I ++ HG+ ++S+C+F EM+ + RPD +TF+ +++ C H G V++G
Sbjct: 602 KNIVSWNSIIAAYGNHGKLKDSLCLFHEMV--EKSGNRPDQITFLEIISLCCHVGDVDEG 659
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
+F+ MT+ Y I+PQ EHY C+VDL GRAGR EA E VK M PD VWG+LL +
Sbjct: 660 VRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASR 719
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
++ + A+ A +L+++DP N GY ++++N + G+W+ V KVR ++K+R K PG
Sbjct: 720 LHKNVELAKVASSRLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGY 779
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIY 519
SWIE++K H F S D HP + IY
Sbjct: 780 SWIEINKITHLFVSGDVNHPESSHIY 805
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 163/360 (45%), Gaps = 48/360 (13%)
Query: 8 LNQTLNQQVLAILERCNHINHL---KQLQSFLTT---LGQSQTNFYAFKLVRFCTLKLSN 61
L +TL +++ +L+ C+++ L KQ+ +F+ G S T+ + C SN
Sbjct: 26 LEETLPRRLSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCG-SFSN 84
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
+ D + + + ++I+++ + + A + Y M+ G P+ +P ++
Sbjct: 85 CGKMFYRLDSRLS-SIRPWNSIISSFV-RMGLLNQALAFYFKMLCFGV-SPDVSTFPCLV 141
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
K+C + +G + + + G + V ++L+ +Y G I +A KLFD + ++
Sbjct: 142 KACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGK-IDVAGKLFDRVLQKDC 200
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
V W M++GY + G A +SVI G F M M
Sbjct: 201 VIWNVMLNGYAKCG------------------ASDSVIKG-------------FSLMRM- 228
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
D I PN VT C LS ++ LG +HG V +GLD + I N+L+ MY KCG
Sbjct: 229 --DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRF 286
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+A + F S+ +WN MI+ + G E S+ F EM+ + PD +TF SLL
Sbjct: 287 DDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMI---SSGVLPDAITFSSLL 343
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 190/423 (44%), Gaps = 56/423 (13%)
Query: 18 AILERCNHINHLKQLQSF---LTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
+++ C + + K ++ +++LG F A L++ L+ + A +FD +
Sbjct: 139 CLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIK-AYLEYGKIDVAGKLFDRVLQ 197
Query: 75 PNTYLYTAMITAYASQPAHAS--SAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
+ ++ M+ YA A S FSL +R Q PN + VL C L
Sbjct: 198 KDCVIWNVMLNGYAKCGASDSVIKGFSL----MRMDQISPNAVTFDCVLSVCASKLLIDL 253
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+H +V SG + E ++ NS ++S Y+
Sbjct: 254 GVQLHGLVVVSGLD----FEGSIKNS----------------------------LLSMYS 281
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
+ G +A LF M D WN +I+G Q+GL +++ FF M +S + P+ +T
Sbjct: 282 KCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEM---ISSGVLPDAIT 338
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
L ++ L+ + IH Y+ R+ + LD F+++ALID Y KC + A++ F + +
Sbjct: 339 FSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCN 398
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL--V 370
+ + +MI+ + +G + +++ +F +++ + I P+ +T +S+L GGL +
Sbjct: 399 SVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVK---ISPNEITLVSILPVI--GGLLAL 453
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGC-LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
+ GR + K + + GC ++D+ + GR A E+ G + D V W S++
Sbjct: 454 KLGRELHGFIIK--KGFDNRCNIGCAVIDMYAKCGRMNLAYEIF-GRLSKRDIVSWNSMI 510
Query: 430 NGC 432
C
Sbjct: 511 TRC 513
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 12/244 (4%)
Query: 191 YTRVGDIKNAASLFDSMPDR--DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
Y G N +F + R + WNS+I+ + GL + A++F+ +M + + P
Sbjct: 76 YAMCGSFSNCGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKM---LCFGVSP 132
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
+ T C + A + + + V G+D + F++++LI Y + G + A + F
Sbjct: 133 DVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLF 192
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
DR +K WN M+N +A G S++ I F M Q I P+ VTF +L+ C
Sbjct: 193 DRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQ---ISPNAVTFDCVLSVCASKL 249
Query: 369 LVEQGRAYFKLMTKT-YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
L++ G L+ + E I++ L+ + + GRF++A+++ + M D V W
Sbjct: 250 LIDLGVQLHGLVVVSGLDFEGSIKN--SLLSMYSKCGRFDDAIKLFRMMS-RADTVTWNC 306
Query: 428 LLNG 431
+++G
Sbjct: 307 MISG 310
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 13/221 (5%)
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P +++L+ L + +L+ GK +H +V N + DS+ ++ MY CGS +
Sbjct: 31 PRRLSLL--LQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKM 88
Query: 308 FDRNSKKRLTS---WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F R RL+S WNS+I+SF G ++ + +M+ C + PD TF L+ AC
Sbjct: 89 FYR-LDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKML-C--FGVSPDVSTFPCLVKAC 144
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+G + + ++ L+ G+ + A ++ + ++ D V+
Sbjct: 145 VALKNF-KGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRV-LQKDCVI 202
Query: 425 WGSLLNGCKIYGRTD--FAEFAVKKLIEIDPNNGGYGIMLA 463
W +LNG G +D F++ ++ +I PN + +L+
Sbjct: 203 WNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLS 243
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/470 (32%), Positives = 247/470 (52%), Gaps = 40/470 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L Y +F+ ++ + +T +IT + + R +R PN++ +
Sbjct: 264 KCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIR--MRESDVSPNEYTF 321
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
V+ C ++ + +H I+ G VE +++ Y++ G
Sbjct: 322 AAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQ------------- 368
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+ +++ +F M RD+ +W+++IAG +Q G S+A
Sbjct: 369 -------------------LTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSW 409
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M ME +P + L LSA G+ +L+ GK +H YV GL+ + + +ALI+MY K
Sbjct: 410 MRME---GPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCK 466
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CGS++EA R FD + SW +MIN +A HG S I +FE++ R +RPD VTF
Sbjct: 467 CGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRV---GLRPDSVTF 523
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
I +L+AC+H GLV+ G YF M+K Y+I P EHYGC++DLL RAGR +A +++ M
Sbjct: 524 IGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMP 583
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
D+VVW +LL C+++G + +++++++PN G I LANIY GKW E
Sbjct: 584 FHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAAD 643
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
+RK++K + K PG SWI+V V F + D++HP+ E+IY+ L+ + +
Sbjct: 644 IRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLAS 693
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 189/449 (42%), Gaps = 79/449 (17%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPN 76
L +LER N ++L Q F++ ++N +LV K +L AR +FD ++ +
Sbjct: 27 LQVLERSN--DNLSQNIHFISQTDLPESNKQLKELV-----KTGHLGNARRMFDKMSQKD 79
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
+T +I+ Y + +S A L+++M + + FI K+C + +++
Sbjct: 80 EISWTTLISGYVN-ANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELL 138
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGD 196
H VK+G LVNS V +A++ YT+ G
Sbjct: 139 HGYAVKTG----------LVNS----------------------VFVGSALLDMYTKNGK 166
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
I +F MP R+V +W ++I G + G +A+ +F M + + T A
Sbjct: 167 IFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMW---RSRVEYDSYTFAIA 223
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
L A +G L G+ IH + G D+ SF++N L MY KCG L+ F++ S + +
Sbjct: 224 LKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDV 283
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
SW ++I + GQ E C + +R ++ ++ P+ TF ++++ C + +E G
Sbjct: 284 VSWTTIITTLVQMGQEE---CAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQL 340
Query: 377 FKL-----MTKTYRIEPQIE-------------------------HYGCLVDLLGRAGRF 406
L + + +E I + ++ + G
Sbjct: 341 HALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHV 400
Query: 407 EEALEVVKGMKIE---PDEVVWGSLLNGC 432
EA E++ M++E P E S+L+ C
Sbjct: 401 SEAFELLSWMRMEGPKPTEFALASVLSAC 429
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/342 (41%), Positives = 213/342 (62%), Gaps = 5/342 (1%)
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
A+I Y ++G I +A +F+ +P +DV +WNS+I G +QNGL ++AI + M
Sbjct: 382 AIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYS--SMRYYSG 439
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
PNQ T V L+A G L+ G HG + +N L D F+S L+DMYGKCG L +A
Sbjct: 440 AVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADAL 499
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
F + SWN++I+ LHG ++ +F+EM Q ++PD +TF+SLL+AC+
Sbjct: 500 SLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEM---QSEGVKPDHITFVSLLSACS 556
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
H GLV++G+ F+LM +TY I P ++HYGC+VDL GRAG E+A VK M + PD VW
Sbjct: 557 HSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVW 616
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
G+LL C+I+ + L++++ N GY ++L+NIY +LG W+ V +VR + +DR
Sbjct: 617 GALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDR 676
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
KTPG S IEVDK++ F++ ++THP+ EEIY L ++ A
Sbjct: 677 GLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTA 718
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 139/560 (24%), Positives = 247/560 (44%), Gaps = 121/560 (21%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTY 78
I C ++ KQL + L G++Q+ F + KL+ L ++ +AR FD + T + Y
Sbjct: 49 IFLYCTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAF-LGDIPHARLTFDQIQTKDVY 107
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHT 138
+ +MI+AYA + H +A + + + Q + + +P V+++C ++ + R VH
Sbjct: 108 TWNSMISAYA-RIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDDGRK---VHC 163
Query: 139 QIVKSGFEQYPVVETALVNSYSRSG--------------NDIGI---------------- 168
++K GFE + + ++ YSR G DIG
Sbjct: 164 LVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAE 223
Query: 169 ARKLFDEMSDRNV--------------VSWTAMISG------------------------ 190
A ++FDEM ++V V +ISG
Sbjct: 224 ALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALIN 283
Query: 191 -YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
Y + G++++A ++F+ M RD+ +WNS++A QN A+ + +M S + P+
Sbjct: 284 MYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMH---SIGVVPD 340
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL-DSFISNALIDMYGKCGSLKEARRAF 308
+TLV S G + IHG+V R L D + NA+IDMY K G + AR+ F
Sbjct: 341 LLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVF 400
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
+ K + SWNS+I ++ +G + +I V+ M P+ T++S+L A + G
Sbjct: 401 EGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYS--GAVPNQGTWVSILTAHSQLG 458
Query: 369 LVEQG-RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV--------------- 412
++QG +A+ +L+ + + CLVD+ G+ G+ +AL +
Sbjct: 459 ALKQGMKAHGQLIKNFLYFDIFVS--TCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAI 516
Query: 413 ----------VKGMK---------IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--- 450
+K +K ++PD + + SLL+ C G D ++ + + E
Sbjct: 517 ISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYG 576
Query: 451 IDPNNGGYGIMLANIYGELG 470
I P+ YG M+ +++G G
Sbjct: 577 IRPSLKHYGCMV-DLFGRAG 595
>gi|345505210|gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea verna]
Length = 588
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/494 (34%), Positives = 260/494 (52%), Gaps = 22/494 (4%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
VL R + Q+ FL G F L+ LK L +AR IFD +
Sbjct: 102 VLKACSRLGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGL-YLKCGCLGFARQIFDRMPQR 160
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
++ Y +MI Y + SA L+ M + + L S ++
Sbjct: 161 DSVSYNSMIDGYV-KCGLIGSARELFDLMPKEMKN----------LISWNSMISGYAQTS 209
Query: 136 VHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
I F + P + +L++ Y + G + A+ LF M R+VV+W MI GY
Sbjct: 210 DGVNIASKLFAEMPEKDLISWNSLIDGYVKHGR-MEDAKDLFYVMPRRDVVTWATMIDGY 268
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
++G + A +LFD MP RDV A+NS++AG QN +A+ F ME ++ P++
Sbjct: 269 AKLGFVHKAKTLFDQMPHRDVVAYNSMMAGYVQNKYNMEALEIFS--DMEKESHLSPDET 326
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
TLV LSAI G L +H Y+ L + ALIDMY KCGS+++A F+R
Sbjct: 327 TLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQQAMLVFERI 386
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K + WN+MI A+HG E++ F+ ++ + +I+PD +TF+ +LNAC+H GLV+
Sbjct: 387 ENKSIDHWNAMIGGLAIHGLGESA---FDMLLEIERRSIKPDDITFVGILNACSHSGLVK 443
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G F+LM + ++IEP+++HYGC+VD+L R+G E A +++ M +EP++V+W + L
Sbjct: 444 EGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPMEPNDVIWRTFLTA 503
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C + + E K LI N ++L+N+Y G W + R+VR M+K+R K P
Sbjct: 504 CSHHKEFETGEVVAKHLILQAGYNPSSYVLLSNMYASFGMWKDARRVRTMMKERELQKVP 563
Query: 492 GCSWIEVDKQVHQF 505
GCSWIE+D +VH+F
Sbjct: 564 GCSWIELDGRVHEF 577
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 187/393 (47%), Gaps = 36/393 (9%)
Query: 69 FDHLTTPNTYLYTAMITAYAS--QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPD 126
F H + +L+ A+I +++ P A F L M+ G ++F VLK+C
Sbjct: 53 FAHGEVEDPFLWNAVIKSHSHGVDPKRALIWFCL---MLENG-VSVDKFSLSLVLKACSR 108
Query: 127 VLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
+ + +H + K+G ++ L+ Y + G +G AR++FD M R+ VS+ +
Sbjct: 109 LGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGC-LGFARQIFDRMPQRDSVSYNS 167
Query: 187 MISGYTRVGDIKNAASLFDSMPD--RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
MI GY + G I +A LFD MP +++ +WNS+I+G Q SD ++ ++ E+ +
Sbjct: 168 MIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGYAQT---SDGVNIASKLFAEMPE 224
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ ++ + G ++ K + + R D +ID Y K G + +A
Sbjct: 225 K---DLISWNSLIDGYVKHGRMEDAKDLFYVMPRR----DVVTWATMIDGYAKLGFVHKA 277
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ FD+ + + ++NSM+ + + + ++ +F +M + + ++ PD T + +L+A
Sbjct: 278 KTLFDQMPHRDVVAYNSMMAGYVQNKYNMEALEIFSDMEK--ESHLSPDETTLVIVLSA- 334
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYG----CLVDLLGRAGRFEEALEVVKGMKIEP 420
+ + GR + Y +E Q G L+D+ + G ++A+ V + +IE
Sbjct: 335 ----IAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQQAMLVFE--RIEN 388
Query: 421 DEVV-WGSLLNGCKIYGRTDFAEFAVKKLIEID 452
+ W +++ G I+G E A L+EI+
Sbjct: 389 KSIDHWNAMIGGLAIHG---LGESAFDMLLEIE 418
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 115/251 (45%), Gaps = 19/251 (7%)
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
WN+VI + A+ +F M + + + ++ +L L A G +Q G IHG
Sbjct: 64 WNAVIKSHSHGVDPKRALIWFCLM---LENGVSVDKFSLSLVLKACSRLGFVQEGMQIHG 120
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
++ + G+ D F+ N LI +Y KCG L AR+ FDR ++ S+NSMI+ + G +
Sbjct: 121 FLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGLIGS 180
Query: 335 SICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG 394
+ +F+ M + + I + + IS + G V F M E + +
Sbjct: 181 ARELFDLMPKEMKNLISWN--SMISGYAQTSDG--VNIASKLFAEMP-----EKDLISWN 231
Query: 395 CLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPN 454
L+D + GR E+A ++ M D V W ++++G Y + F A K L + P+
Sbjct: 232 SLIDGYVKHGRMEDAKDLFYVMP-RRDVVTWATMIDG---YAKLGFVHKA-KTLFDQMPH 286
Query: 455 NG--GYGIMLA 463
Y M+A
Sbjct: 287 RDVVAYNSMMA 297
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 250/432 (57%), Gaps = 11/432 (2%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +F+ + + + +I Y + + A +YR M+ G +PN + ++ C
Sbjct: 283 ARVVFERIPNKDLVTWGTIIDGYV-RVERINEALMMYRSMISAGW-EPNDVMMVDLISGC 340
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ + + + +VK GF+ Y +++ +++ Y+ G I A F S NV SW
Sbjct: 341 GRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGR-INEACLQFRIGSKENVASW 399
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
A+I+GY R I A LF+ MP+RDV +W+++I+G TQN + A+ F +M V+
Sbjct: 400 NALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKM---VAS 456
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
I+PN+VT+V LSAI +G L+ G+ H YV+ N + + +S A+IDMY KCGS+ A
Sbjct: 457 GIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSINNA 516
Query: 305 RRAF--DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
F R ++ WN++I A+HG + S+ +F ++ R +I+ + +TFI +L
Sbjct: 517 LEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLER---RHIKLNAITFIGVLT 573
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC H GLVE G+ +F M + I+P I+HYGC+VDLLGRAGR EEA E+++ M ++ D
Sbjct: 574 ACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADV 633
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
V+WG+LL C+ +G D E A + L ++P++G ++L+N+Y + GKW++ VR+ +
Sbjct: 634 VIWGTLLAACRTHGNVDVGERAAENLARLEPSHGASRVLLSNMYADAGKWEDAFLVRRAM 693
Query: 483 KDRNAYKTPGCS 494
+ + PG S
Sbjct: 694 QSHRMQRLPGYS 705
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 195/415 (46%), Gaps = 38/415 (9%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K L YA +FD + YT MI + SQ + A L++ M R PN+
Sbjct: 143 VKSGQLDYACELFDEMPVKGCVSYTTMIMGF-SQNECWNQAVELFKQM-RNVGVVPNEVT 200
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
++ + +M+H ++K FE++ +V T L+ Y + + AR LFDEM
Sbjct: 201 IATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVE-ARALFDEM 259
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
++N+VSW M++GY++ G + +A +F+ +P++D+ W ++I G + ++A+ +R
Sbjct: 260 PEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYR 319
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M +S PN V +V +S G T + G+ + V + G D FI + +I +Y
Sbjct: 320 SM---ISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYA 376
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM-------------- 342
CG + EA F SK+ + SWN++I + + + ++ +F EM
Sbjct: 377 ACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISG 436
Query: 343 --------------MRCQDHNIRPDGVTFISLLNACTHGGLVEQGR-AYFKLMTKTYRIE 387
+ I+P+ VT +S+L+A G +++GR A+ + + +
Sbjct: 437 YTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVS 496
Query: 388 PQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV-WGSLLNGCKIYGRTDFA 441
+ ++D+ + G ALEV ++ + V W +++ G ++G + +
Sbjct: 497 DNLS--AAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLS 549
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 154/337 (45%), Gaps = 54/337 (16%)
Query: 106 RRGQPQPN-QFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN 164
+ GQ N + + LK C D L K +H + KSG ++ +L+N Y + G
Sbjct: 57 KTGQRHFNYELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGL 116
Query: 165 DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQ 224
+ A+ +FD + VS+ MISGY + G + A LFD MP + ++ ++I G +Q
Sbjct: 117 LVD-AKSIFDVCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQ 175
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
N ++ A+ F++M + + PN+VT+ +SA H G + +++HG V + +
Sbjct: 176 NECWNQAVELFKQMR---NVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEF 232
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
+S L+ MY C SL EAR FD +K + SWN M+N ++ G +++ VFE +
Sbjct: 233 VLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERI-- 290
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
D VT +G ++D R
Sbjct: 291 -----PNKDLVT------------------------------------WGTIIDGYVRVE 309
Query: 405 RFEEALEVVKGM---KIEPDEVVWGSLLNGCKIYGRT 438
R EAL + + M EP++V+ L++GC GRT
Sbjct: 310 RINEALMMYRSMISAGWEPNDVMMVDLISGC---GRT 343
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/417 (36%), Positives = 237/417 (56%), Gaps = 37/417 (8%)
Query: 145 FEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
F++ P V TA+++ Y+++G I +ARKLF+ M DRN VSWTAM+ GY + G +++A
Sbjct: 197 FDEMPKRNVVSWTAMISGYAQNGKVI-LARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDA 255
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG--------------------M 240
LF++MPD V A N+++ G Q+G+ A + F RM M
Sbjct: 256 EDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLM 315
Query: 241 E--------VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALI 292
E + IRPN + + L+ G+ +H + R D D F +ALI
Sbjct: 316 EALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALI 375
Query: 293 DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
MY KCG+L +A+R F+ K + WNSMI +A HG E ++ +F+++ + + P
Sbjct: 376 TMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLAR---MAP 432
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
DG+T+I +L AC++ G V++GR F M I HY C+VDLLGRAG +EAL++
Sbjct: 433 DGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDL 492
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKW 472
+ M +EPD ++WG+L+ C+++ + AE A KKL+E++P + G ++L++IY G+W
Sbjct: 493 INNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIYTSTGRW 552
Query: 473 DEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDK-THPRTEEIYDALESMVAL 528
++ +RK + RN K+PGCSWIE +K VH F S D +HP I + LE + L
Sbjct: 553 EDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAIILNMLEELDGL 609
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 194/449 (43%), Gaps = 47/449 (10%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
++ N+ AR FD + T Y A+I Y +A L+ M R N I
Sbjct: 28 VRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHL-PDAALGLFHRMPSRDLGSYNALI 86
Query: 117 YPHVLK--SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
L+ + PD + + + +V T+L+ Y R G + A +LF
Sbjct: 87 AGLSLRRHTLPDAAAALASIPLPPSVVSF---------TSLLRGYVRHGL-LADAIRLFH 136
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
+M +RN V++T ++ G+ G + A LFD MPD+DV A ++++G Q G ++A +
Sbjct: 137 QMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARAL 196
Query: 235 FRRMGME--------VSDNIRPNQVTLVCAL-------SAIGHTGMLQLGKVIHGYV--- 276
F M +S + +V L L + + T ML +G + G+V
Sbjct: 197 FDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAML-VGYIQAGHVEDA 255
Query: 277 ---YRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSE 333
+ D NA++ +G+ G + A+ F+R + +W++MI + +
Sbjct: 256 EDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLM 315
Query: 334 NSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHY 393
++ F EM+ C+ IRP+ +FIS+L C + GR M + + +
Sbjct: 316 EALSTFREML-CR--GIRPNYTSFISILTVCAALATADYGRELHAAMLRC-SFDTDVFAV 371
Query: 394 GCLVDLLGRAGRFEEALEVVKGMKIEPDEVV-WGSLLNGCKIYGRTDFAE--FAVKKLIE 450
L+ + + G ++A V EP +VV W S++ G +G + A F +L
Sbjct: 372 SALITMYIKCGNLDKAKRVFN--MFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLAR 429
Query: 451 IDPNNGGY-GIMLANIYGELGKWDEVRKV 478
+ P+ Y G++ A Y GK E R++
Sbjct: 430 MAPDGITYIGVLTACSY--TGKVKEGREI 456
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 137/307 (44%), Gaps = 43/307 (14%)
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM-- 238
VV+ A I+ R G+I+ A + FD+MP R ++N++IAG +N L A+ F RM
Sbjct: 17 VVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPS 76
Query: 239 -----------GMEVSDNIRPNQVTLVCAL----SAIGHTGMLQLGKVIHGY------VY 277
G+ + + P+ + ++ S + T +L+ G V HG ++
Sbjct: 77 RDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLR-GYVRHGLLADAIRLF 135
Query: 278 RNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSIC 337
+ + L+ + G + EAR+ FD K + + +M++ + G+ +
Sbjct: 136 HQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARA 195
Query: 338 VFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLV 397
+F+EM + N+ V++ ++++ G V R F++M ++ LV
Sbjct: 196 LFDEMPK---RNV----VSWTAMISGYAQNGKVILARKLFEVMPD----RNEVSWTAMLV 244
Query: 398 DLLGRAGRFEEALEVVKGMKIEPDEVVWG--SLLNGCKIYGRTDFAEFAVKKLIEIDPNN 455
+ +AG E+A ++ M PD V +++ G +G D A+ +++ D +
Sbjct: 245 GYI-QAGHVEDAEDLFNAM---PDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARD--D 298
Query: 456 GGYGIML 462
G + M+
Sbjct: 299 GTWSAMI 305
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/444 (34%), Positives = 255/444 (57%), Gaps = 9/444 (2%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L +A+ +FD + + + +I Y SQ L+ D + + + ++
Sbjct: 167 LGFAQKMFDGMLDRDLVSWNTLICGY-SQYNKYKEVLRLF-DAMTAANIKADAVTMVKII 224
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+C + + + I ++ E + L++ Y R + +A+ +FD M +RN+
Sbjct: 225 LACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRR-SLAELAQGVFDRMRERNI 283
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
VSW A++ G+ +VG++ A LFD+MP RDV +W S+I G +Q FSDA+ F+ M
Sbjct: 284 VSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEM--- 340
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
++ ++P++VT+ LSA H G L +G +H Y+ R+G+ D ++ N+LIDMY KCG +
Sbjct: 341 MAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMV 400
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
++A F R K SW S+I+ A++G + +++ +F +M+R ++P TF+ +L
Sbjct: 401 EKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLR---EGVQPTHGTFVGIL 457
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
AC H GLV +G YF+ M + + P ++HYGC+VDLL R+G ++A E +K M I PD
Sbjct: 458 LACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPD 517
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
VVW LL+ CK++G AE A K+L+E+DP + G ++L+N Y + +WD+ K+R++
Sbjct: 518 VVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMREL 577
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQF 505
++D + K G S IEVD V +
Sbjct: 578 MEDSDVQKPSGSSSIEVDGMVSNY 601
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/474 (27%), Positives = 212/474 (44%), Gaps = 76/474 (16%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
K+L + L F ++R +L +NL A +F+ + P ++ MI S
Sbjct: 34 KELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMIRGL-S 92
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
Q H A +Y M +G N + K+C V + + +H +K GFE Y
Sbjct: 93 QSDHPVEAIHMYTRMHHQG-ITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYL 151
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
V AL++ Y+ G +G A+K+FD M DR++VSW +I GY++ K LFD+M
Sbjct: 152 FVSNALIHMYAMCGQ-LGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAM-- 208
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
+ NI+ + VT+V + A H G +
Sbjct: 209 --------------------------------TAANIKADAVTMVKIILACSHLGDWEFA 236
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYG-------------------------------KC 298
+ Y+ N L++D ++ N LIDMYG K
Sbjct: 237 DSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKV 296
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G+L AR+ FD K+ + SW SMI ++ Q +++ +F+EMM + ++PD VT
Sbjct: 297 GNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAK---VKPDKVTVA 353
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
S+L+AC H G ++ G A + + + ++ I L+D+ + G E+ALEV MK
Sbjct: 354 SVLSACAHLGKLDVGWAVHHYI-RRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMK- 411
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGY-GIMLANIYGEL 469
+ D V W S+++G + G + A +++ + P +G + GI+LA + L
Sbjct: 412 DKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGL 465
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 180/583 (30%), Positives = 293/583 (50%), Gaps = 83/583 (14%)
Query: 16 VLAILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
+ ++L C+ + L KQL S+L G S L+ +K ++ A IFD
Sbjct: 247 IASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDL-YVKSGDIEEALQIFDSG 305
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
N L+ M+ AY Q + +F ++ M+ G +PN+F YP +L++C E
Sbjct: 306 DRTNVVLWNLMLVAYG-QIDDLAKSFDIFYRMLAAG-VRPNKFTYPCMLRTCTHTGEIGL 363
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+ +H+ +K+GF+ V L++ YS+ G + A+++ D + +++VVSWT+MI+GY
Sbjct: 364 GEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGW-LDKAQRILDMIEEKDVVSWTSMIAGYV 422
Query: 193 RVGDIKNAASLFDSM------PDR---------------------------------DVP 213
+ K A F M PD DV
Sbjct: 423 QHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVS 482
Query: 214 AWN-------------------------------SVIAGCTQNGLFSDAISFFRRMGMEV 242
WN +I+G Q+GL+ +A+ F +M
Sbjct: 483 IWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQA- 541
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
+ N T V ++SA + ++ GK IH V + G ++ ISNALI +YGKCGS++
Sbjct: 542 --GAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIE 599
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
+A+ F +K+ SWN++I + HG+ ++ +F++M + ++P VTF+ +L
Sbjct: 600 DAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQM---KQQGLKPSDVTFVGVLT 656
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H GLVE+G YFK M+ + I P+ +HY C+VD+LGRAG+ + A V+ M I D
Sbjct: 657 ACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADS 716
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
+VW +LL+ CK++ + EFA K L+E++P++ ++L+N Y GKW ++RK++
Sbjct: 717 MVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIM 776
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
KDR K PG SWIEV VH F D+ HP ++IY+ L +
Sbjct: 777 KDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHL 819
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 198/443 (44%), Gaps = 56/443 (12%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYL 79
L R H+ KQ T +G + + Y +R + +L++ + ++ T NT
Sbjct: 161 LGRLIHVQVYKQGFFSETFVGNALISLY----LRCRSFRLADRVFCDMLYCDSVTFNT-- 214
Query: 80 YTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQ 139
+I+ +A Q H A ++ +M G P+ +L +C V + R K +H+
Sbjct: 215 ---LISGHA-QCGHGDRALGIFDEMQLSGL-SPDSVTIASLLAACSAVGDLRKGKQLHSY 269
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
++K+G ++E +L++ Y +SG DI A ++FD NVV W M+ Y G I +
Sbjct: 270 LLKAGMSLDYIMEGSLLDLYVKSG-DIEEALQIFDSGDRTNVVLWNLMLVAY---GQIDD 325
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
A FD F RM ++ +RPN+ T C L
Sbjct: 326 LAKSFD----------------------------IFYRM---LAAGVRPNKFTYPCMLRT 354
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSW 319
HTG + LG+ IH +NG D ++S LIDMY K G L +A+R D +K + SW
Sbjct: 355 CTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSW 414
Query: 320 NSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG-RAYFK 378
SMI + H + ++ F+EM C I PD + S ++AC V QG + + +
Sbjct: 415 TSMIAGYVQHEFCKEALETFKEMQAC---GIWPDNIGLASAISACAGIKAVHQGSQIHAR 471
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
+ Y + I + LV L R G +EA + ++ + + W L++G + ++
Sbjct: 472 VYVSGYSADVSI--WNGLVYLYARCGISKEAFSSFEAIE-HKEGITWNGLISG---FAQS 525
Query: 439 DFAEFAVKKLIEIDPNNGGYGIM 461
E A+K +++D Y +
Sbjct: 526 GLYEEALKVFMKMDQAGAKYNVF 548
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 181/408 (44%), Gaps = 50/408 (12%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +F+ L+ + + A+++ YA Q A LYR+M R G P ++ +L +C
Sbjct: 96 ARRVFEELSVRDNVSWVAVLSGYA-QNGLGEEAVRLYREMHRSGVV-PTPYVLSSILSAC 153
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ +++H Q+ K GF ET + N
Sbjct: 154 TKTELFQLGRLIHVQVYKQGF----FSETFVGN--------------------------- 182
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
A+IS Y R + A +F M D +N++I+G Q G A+ F M +
Sbjct: 183 -ALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLS--- 238
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ P+ VT+ L+A G L+ GK +H Y+ + G+ LD + +L+D+Y K G ++EA
Sbjct: 239 GLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEA 298
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ FD + + WN M+ ++ GQ ++ F+ R +RP+ T+ +L C
Sbjct: 299 LQIFDSGDRTNVVLWNLMLVAY---GQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTC 355
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
TH G + G L K + + G L+D+ + G ++A ++ M E D V
Sbjct: 356 THTGEIGLGEQIHSLTIKN-GFQSDMYVSGVLIDMYSKYGWLDKAQRILD-MIEEKDVVS 413
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEID-----PNNGGYGIMLANIYG 467
W S++ G Y + +F + A++ E+ P+N G ++ G
Sbjct: 414 WTSMIAG---YVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAG 458
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 159/350 (45%), Gaps = 50/350 (14%)
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+H + + G Y ++ L++ Y++ G + AR++F+E+S R+ VSW A++SGY
Sbjct: 64 IHAKAIICGLSGYRIIGNLLIDLYAKKGF-VRRARRVFEELSVRDNVSWVAVLSGY---- 118
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
QNGL +A+ +R M + P L
Sbjct: 119 ---------------------------AQNGLGEEAVRLYREMH---RSGVVPTPYVLSS 148
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR 315
LSA T + QLG++IH VY+ G ++F+ NALI +Y +C S + A R F
Sbjct: 149 ILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCD 208
Query: 316 LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRA 375
++N++I+ A G + ++ +F+EM Q + PD VT SLL AC+ G + +G+
Sbjct: 209 SVTFNTLISGHAQCGHGDRALGIFDEM---QLSGLSPDSVTIASLLAACSAVGDLRKGKQ 265
Query: 376 YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIY 435
+ K I G L+DL ++G EEAL++ + V+W +L Y
Sbjct: 266 LHSYLLKAGMSLDYIME-GSLLDLYVKSGDIEEALQIFDSGD-RTNVVLWNLMLVA---Y 320
Query: 436 GRTD-----FAEFAVKKLIEIDPNNGGYGIMLANI--YGELGKWDEVRKV 478
G+ D F F + PN Y ML GE+G +++ +
Sbjct: 321 GQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSL 370
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 37/220 (16%)
Query: 251 VTLVCALSAIGHTGM-LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
V CAL A +G L IH GL I N LID+Y K G ++ ARR F+
Sbjct: 42 VDFACALRACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFE 101
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
S + SW ++++ +A +G E ++ ++ EM R + P S+L+ACT L
Sbjct: 102 ELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHR---SGVVPTPYVLSSILSACTKTEL 158
Query: 370 VEQGR---------AYFK------------LMTKTYRIEPQI---------EHYGCLVDL 399
+ GR +F L +++R+ ++ + L+
Sbjct: 159 FQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISG 218
Query: 400 LGRAGRFEEALEVVKGMK---IEPDEVVWGSLLNGCKIYG 436
+ G + AL + M+ + PD V SLL C G
Sbjct: 219 HAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVG 258
>gi|297607983|ref|NP_001061009.2| Os08g0153600 [Oryza sativa Japonica Group]
gi|255678154|dbj|BAF22923.2| Os08g0153600 [Oryza sativa Japonica Group]
Length = 551
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/469 (34%), Positives = 255/469 (54%), Gaps = 25/469 (5%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L L AR +FD + TP+ Y +++ + + A A L+ M R N +
Sbjct: 62 LGRLADARHLFDRIPTPDAVSYNTLLSCHFAS-GDADGARRLFASMPVRDVVSWNTMV-- 118
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVET----ALVNSYSRSGNDIGIARKLFD 174
S +K + K+ F PV + A+V+ ++ S D+ A + F
Sbjct: 119 -----------SGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACS-RDMSAAEEWFR 166
Query: 175 EMSDR-NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
++ + V WTAM+SGY +G++ A F++MP R++ +WN+V+AG +N DA+
Sbjct: 167 NAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALR 226
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
FR M E N++PN TL L + L GK IH + + L + + +L+
Sbjct: 227 LFRTMVREA--NVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVS 284
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
MY KCG L A + F + + +WN+MI+ +A HG + +I +FE M +D + P+
Sbjct: 285 MYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERM---KDEGVEPN 341
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
+TF+++L AC H GL + G F+ M + Y IEP+++HY C+VDLL RAG+ E A++++
Sbjct: 342 WITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLI 401
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
+ M EP +G+LL C++Y +FAE A KLIE DP + G + LANIY +WD
Sbjct: 402 RSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWD 461
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+V +VR+ +KD KTPG SWIE+ +H+F S D+ HP+ I++ L
Sbjct: 462 DVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKL 510
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 143/304 (47%), Gaps = 28/304 (9%)
Query: 142 KSGFEQYPVVETA----LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
+ F P TA L+ Y+R+ + AR LFD + + VS+ ++S + GD
Sbjct: 37 EEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDA 96
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT--LVC 255
A LF SMP RDV +WN++++G +++G +A + F + M V +++ N + C
Sbjct: 97 DGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVF--LAMPVRNSVSWNAMVSGFAC 154
Query: 256 A--LSAIGHTGMLQLGKVIHGYVYRNGLDL-DSFISNALIDMYGKCGSLKEARRAFDRNS 312
+ +SA +RN + D+ + A++ Y G++ +A F+
Sbjct: 155 SRDMSAAEEW-------------FRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMP 201
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+ L SWN+++ + + +++++ +F M+R + N++P+ T S+L C++ +
Sbjct: 202 VRNLVSWNAVVAGYVKNSHADDALRLFRTMVR--EANVQPNASTLSSVLLGCSNLSALGF 259
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G+ + K + + LV + + G A ++ M D V W ++++G
Sbjct: 260 GKQIHQWCMK-LPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTR-DVVAWNAMISGY 317
Query: 433 KIYG 436
+G
Sbjct: 318 AQHG 321
>gi|147816693|emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
Length = 531
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/507 (30%), Positives = 270/507 (53%), Gaps = 7/507 (1%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTY 78
+L+ C++ ++Q+ + G A +L+ + +S + YA +F+ + +P+ +
Sbjct: 31 LLQMCHNFQEVRQIHAQFIVSGLLARPPNAGRLLD-SYVSMSQIYYALLVFNRIPSPDVF 89
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHT 138
Y AMI S + ++ P+ + Y VLK C + K VH
Sbjct: 90 AYNAMIRGLTLGNCPYDSLLLYNKLLLG--GLTPDNYTYTFVLKVCSHLKAIFEGKQVHC 147
Query: 139 QIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIK 198
Q++K+G + T+L++ Y++S + + A + E S NV++ +MISGY G ++
Sbjct: 148 QVIKAGVAPDTHIHTSLIHMYAKS-DCLACAEGVLAECSQENVLAINSMISGYMSQGHVE 206
Query: 199 NAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
A ++FD M +D W+ +I G T+NG+ +A+ FR M M + ++PN+ LV +LS
Sbjct: 207 KARAMFDKMGAKDAATWSGMITGYTKNGMHEEALVMFREMMMVSNSGVQPNESALVSSLS 266
Query: 259 AIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS 318
A G L G+ IH Y+ R G + + L+DMY KCGS+ + + F ++ + +
Sbjct: 267 ATACLGALDQGRWIHAYIRRIGAKISITLGTGLVDMYAKCGSIHCSYKLFREMQQRDVVT 326
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
W M++ FA+HGQ+ +F+EM+ RP+ V F+++L+AC+H G +E G YF
Sbjct: 327 WGVMMSGFAMHGQARKCFQLFDEMV---AGGTRPNEVIFVAILSACSHAGYLELGHHYFN 383
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
M + I P +EHYGC+VDLLGRAG+ EA E++ M EP V+WG+LL+ C+I+
Sbjct: 384 QMVTDFGIRPSVEHYGCMVDLLGRAGQLAEAEELIISMPEEPTAVIWGALLSACRIHKDL 443
Query: 439 DFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV 498
A ++L++++P G + ++ G+ +E V + +K+ T G S+IE+
Sbjct: 444 RRGRRAFRQLMQLEPLRGDRYKLAGQMFSSAGEKEEADNVTRFIKENELETTRGSSFIEI 503
Query: 499 DKQVHQFHSLDKTHPRTEEIYDALESM 525
+ VH+F D H + E+Y E +
Sbjct: 504 NGVVHEFVVGDADHHKAREMYRMWEGI 530
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/468 (33%), Positives = 251/468 (53%), Gaps = 41/468 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K + YA +F + + +TA+IT + ++ S ++ M+ G PN + +
Sbjct: 238 KCGSANYACKVFGEIPERDVVSWTALITGFVAEGY--GSGLRIFNQMLAEG-FNPNMYTF 294
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+L+SC + + K VH QIVK+ + V TALV+ Y A+ F
Sbjct: 295 ISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMY---------AKNRF---- 341
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+++A ++F+ + RD+ AW ++AG Q+G A+ F +
Sbjct: 342 -------------------LEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQ 382
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M E ++PN+ TL +LS L G+ +H + G D F+++AL+DMY K
Sbjct: 383 MQRE---GVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAK 439
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG +++A FD + SWN++I ++ HGQ ++ FE M+ D PD VTF
Sbjct: 440 CGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAML---DEGTVPDEVTF 496
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
I +L+AC+H GL+E+G+ +F ++K Y I P IEHY C+VD+LGRAG+F E ++ MK
Sbjct: 497 IGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMK 556
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
+ + ++W ++L CK++G +F E A KL E++P I+L+N++ G WD+V
Sbjct: 557 LTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTN 616
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
VR ++ R K PGCSW+EV+ QVH F S D +HP+ EI+ L+ +
Sbjct: 617 VRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDL 664
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 170/395 (43%), Gaps = 46/395 (11%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K +L AR + + + + + +++ A+ P A L+ ++R + + NQFI
Sbjct: 35 VKCESLQCARQVLEEMPIQDVQQWNQKLSS-ANSPYPLQEAVQLFY-LMRHTRIRLNQFI 92
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ ++ + + ++ + +H + K GFE +DI I+
Sbjct: 93 FASLISAAASLGDNHYGESIHACVCKYGFE-----------------SDILIS------- 128
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
A ++ Y + ++N F +M ++ + N++++G
Sbjct: 129 --------NAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILI 180
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
++ +E PN T + L G L GK IHG V ++G++ DS + N+L+++Y
Sbjct: 181 QLLVE---GFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYA 237
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCGS A + F ++ + SW ++I F G + + +F +M+ P+ T
Sbjct: 238 KCGSANYACKVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLA---EGFNPNMYT 293
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
FIS+L +C+ V+ G+ + K ++ LVD+ + RF E E +
Sbjct: 294 FISILRSCSSLSDVDLGKQVHAQIVKN-SLDGNDFVGTALVDMYAK-NRFLEDAETIFNR 351
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
I+ D W ++ G Y + E AVK I++
Sbjct: 352 LIKRDLFAWTVIVAG---YAQDGQGEKAVKCFIQM 383
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 8/248 (3%)
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
W+++++ Y + ++ A + + MP +DV WN ++ +A+ F M
Sbjct: 27 WSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMR---H 83
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
IR NQ +SA G G+ IH V + G + D ISNA + MY K S++
Sbjct: 84 TRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVEN 143
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
+ F + L S N++++ F + + +++ P+ TFIS+L
Sbjct: 144 GWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLV---EGFEPNMYTFISILKT 200
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C G + +G+A + K+ I P + LV++ + G A +V G E D V
Sbjct: 201 CASKGDLNEGKAIHGQVIKS-GINPDSHLWNSLVNVYAKCGSANYACKVF-GEIPERDVV 258
Query: 424 VWGSLLNG 431
W +L+ G
Sbjct: 259 SWTALITG 266
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 4/144 (2%)
Query: 276 VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
V +NG+ DS + ++L+++Y KC SL+ AR+ + + + WN ++S + +
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ +F M + IR + F SL++A G G + + K Y E I
Sbjct: 75 VQLFYLMRHTR---IRLNQFIFASLISAAASLGDNHYGESIHACVCK-YGFESDILISNA 130
Query: 396 LVDLLGRAGRFEEALEVVKGMKIE 419
V + + E + K M IE
Sbjct: 131 FVTMYMKTQSVENGWQFFKAMMIE 154
>gi|326507322|dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 593
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 260/459 (56%), Gaps = 14/459 (3%)
Query: 69 FDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
FD + + +IT Y S+ A L+ M RR N I +
Sbjct: 128 FDEMPVKDPIPINCLITGY-SKAGDVDKARRLFDGMERRTSASWNSMIACYAHGG----- 181
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN-DIGI-ARKLFDEMSDRNVVSWTA 186
E R + +++ G + T++ + ++SG+ D G R L E +NV+ TA
Sbjct: 182 EFREALALFDRMLSEGARPNAITITSVFSICAKSGDLDTGKRVRDLIGEDDLQNVIVHTA 241
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
++ Y + I +A FD M RDV AW+++IAG QNG +++ F RM + +
Sbjct: 242 LMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMK---ATDC 298
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
RPN+VTLV +SA G +L + I Y L L S++ +ALIDMY +CG + AR
Sbjct: 299 RPNEVTLVGVISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARS 358
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F R +K + +WNSMI A++G +E++I ++E+M ++ ++P+ +TF++LL ACTH
Sbjct: 359 VFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEKM---AENGVQPNEITFVALLAACTH 415
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GLV+QG A+F+ M + + + PQ+EH C+VDLL ++G EA + + M++EP+ V+W
Sbjct: 416 AGLVDQGMAFFEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYKFICDMEVEPNAVIWT 475
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+LL+ C+ + + A+ A +KL+ ++P+N ++L+NIY + G W + R++R +++ +N
Sbjct: 476 TLLSSCRAHADVELAKLASRKLLAMEPDNSSIYVLLSNIYADAGLWGDAREIRDLMRSKN 535
Query: 487 AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K SWI++D +VH+F D HPR+ EIYD + +
Sbjct: 536 VQKLSAYSWIKLDGEVHKFLVQDTYHPRSAEIYDVIHGL 574
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 206/408 (50%), Gaps = 28/408 (6%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + P L + +++ + +H + M R+G P+ + P V KSC
Sbjct: 23 ARNLFDAVPRPAPALCSTFLSSLSRASSH-HDLLQTFSSMHRKGAYVPSGCV-PLVFKSC 80
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
S + VH + G V TALV+ Y+++G D+ A FDEM ++ +
Sbjct: 81 ALTASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNG-DMESAVSAFDEMPVKDPIPI 139
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+I+GY++ GD+ A LFD M R +WNS+IA G F +A++ F RM +S+
Sbjct: 140 NCLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRM---LSE 196
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
RPN +T+ S +G L GK + + + L + + AL++MY KC ++ +A
Sbjct: 197 GARPNAITITSVFSICAKSGDLDTGKRVRDLIGEDDLQ-NVIVHTALMEMYVKCRAIDDA 255
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
RR FDR S++ + +W++MI +A +G+ S+ +FE M + + RP+ VT + +++AC
Sbjct: 256 RREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERM---KATDCRPNEVTLVGVISAC 312
Query: 365 THGG---LVEQGRAYFKLMTKTYRIEPQIEHYG-CLVDLLGRAGRFEEALEVVKGMKIEP 420
G LVEQ Y + R+ P + G L+D+ R G A V M+ +
Sbjct: 313 AQLGSDELVEQIGNY----AENQRL-PLTSYLGSALIDMYTRCGHVGRARSVFSRME-QK 366
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAV---KKLIE--IDPNNGGYGIMLA 463
+ W S++ G + G FAE A+ +K+ E + PN + +LA
Sbjct: 367 GVITWNSMIRGLAMNG---FAEDAISLYEKMAENGVQPNEITFVALLA 411
>gi|242033621|ref|XP_002464205.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
gi|241918059|gb|EER91203.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
Length = 521
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/490 (31%), Positives = 257/490 (52%), Gaps = 14/490 (2%)
Query: 22 RCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYT 81
RC + HL+QL + L G ++ A + V FC +++YA + H PN++++
Sbjct: 42 RCASMAHLRQLHAALVKSGLAKDPIAASRAVAFCAGPGRDVSYAERLVRHHPRPNSFMWN 101
Query: 82 AMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIV 141
+I A S A +A +L+ DM+ P P + P +L + + + +H +
Sbjct: 102 TVIRAL-SDGARPEAAVALFVDMLGSPTP-PERRTLPSLLAAYARLGRAGDGAALHGMAL 159
Query: 142 KSGFEQYPVVETALVNSYSRSGN-DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
K G V A + Y+ D +A LF + + + V+ + I R G + A
Sbjct: 160 KLGLAGDAYVRNATIAMYASCARADEALA--LFGQCPEFDAVACNSAIVALARAGRVDEA 217
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
++FD MP+R V W+++++ + +A++ F M +D + PN LV L
Sbjct: 218 RAVFDGMPERTVATWSAMVSAYARAARCGEALALFSAM---QADGVEPNANVLVSVLGCC 274
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD---RNSKKRLT 317
G L G +H Y+ R+G+ +++ + AL+DMY KCGS+ +AR+ FD +L+
Sbjct: 275 ASLGALDQGAWVHAYIDRHGVAMNALVVTALVDMYCKCGSVDDARQVFDAARSQGSAKLS 334
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
SWNSM+ A+HGQ ++ +F E+ + + + PD VTFI++L A H G+ ++ +A F
Sbjct: 335 SWNSMMQGLAVHGQWREAVALFSEL---RSYGLSPDNVTFIAVLTAYGHAGMPDEAQAAF 391
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
M + +EP IEHYGCLVD L RAGR EA + ++ M + PD VWG+LL+GC+++G
Sbjct: 392 ASMATEHSVEPGIEHYGCLVDALARAGRLREAEDAIRSMPMAPDAAVWGALLSGCRLHGD 451
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
+ A ++ + DP + G ++ A++ G VR +++ K PGCS IE
Sbjct: 452 AELGARAAREAVRCDPRDSGAYVLAASVLARGGNPGRGAGVRGRMREAGVGKVPGCSMIE 511
Query: 498 VDKQVHQFHS 507
V+ VH+F S
Sbjct: 512 VNGVVHEFVS 521
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/466 (33%), Positives = 254/466 (54%), Gaps = 8/466 (1%)
Query: 60 SNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPH 119
S++ AR +FD + + +I Y + A ++ MV G P++
Sbjct: 169 SSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGV-PREALEMFWRMVGDGAVTPDEVTMIG 227
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
V+ + + + +H + G + +++ Y + G D+ A+ +F+ + +
Sbjct: 228 VVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCG-DLERAKSVFEGIDKK 286
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
+VSWT MI GY + G + +A +FD MP+RDV WN+++ G Q +A+ F M
Sbjct: 287 TIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQ 346
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
+ + P+ +T+V LSA G L++G +H Y+ R + L + L+DMY KCG
Sbjct: 347 EAM---VEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCG 403
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
++++A R F +K +W +MI+ A HG ++ +I F+ M+ + ++PD +TFI
Sbjct: 404 NIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMI---ELGLQPDEITFIG 460
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
+L+AC H GLV++G+ +F LM Y +E +++HY C+VDLLGRAG +EA +V M +E
Sbjct: 461 VLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPME 520
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVR 479
PD VVWG+L C+++G E A KL+E+DP + G ++LAN+Y E + KVR
Sbjct: 521 PDAVVWGALFFACRMHGNITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRKKADKVR 580
Query: 480 KMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
M++ K PGCS IE++ VH+F DK+H IYD L +
Sbjct: 581 VMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHTDIAAIYDCLHEI 626
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 172/385 (44%), Gaps = 66/385 (17%)
Query: 95 SSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETA 154
+ LY ++R +P + +P +LK+C + E V ++ GF V A
Sbjct: 103 TRCLPLYCSLLRSARP--DHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNA 160
Query: 155 LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPA 214
++ + + + ARKLFD R++VSW +I GY R G + A +F
Sbjct: 161 AMH-FLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMF---------- 209
Query: 215 WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG 274
W V G + P++VT++ +S L+LG+ +HG
Sbjct: 210 WRMVGDGA-----------------------VTPDEVTMIGVVSGSAQLRDLELGRRLHG 246
Query: 275 YVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSEN 334
YV +G+ + N ++DMY KCG L+ A+ F+ KK + SW +MI +A G ++
Sbjct: 247 YVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDD 306
Query: 335 SICVFEEM---------------MRC-------------QDHNIRPDGVTFISLLNACTH 366
+ VF+EM ++C Q+ + PD +T ++LL+AC+
Sbjct: 307 ARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQ 366
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
G +E G + + R+ + LVD+ + G E+A+ V K + E + + W
Sbjct: 367 LGALEMGMWVHHYIDRR-RVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIP-EKNALTWT 424
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEI 451
++++G +G D A +++IE+
Sbjct: 425 AMISGLANHGHADVAIKYFQRMIEL 449
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 10/247 (4%)
Query: 208 PDRDVP--AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
PD P A ++ CT GL + + + + + RP+ +T L A
Sbjct: 80 PDSASPYNAALRALSLCTDRGLVTRCLPLY----CSLLRSARPDHLTFPFLLKACARLQE 135
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
G + G V G D F+ NA + C S+ EAR+ FD + + L SWN++I
Sbjct: 136 RNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGG 195
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
+ G ++ +F M+ D + PD VT I +++ +E GR + +++
Sbjct: 196 YVRRGVPREALEMFWRMV--GDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYV-ESHG 252
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
+ + ++D+ + G E A V +G+ + V W +++ G +G D A
Sbjct: 253 VRCTVRLMNVVMDMYIKCGDLERAKSVFEGID-KKTIVSWTTMIVGYAQFGLMDDARKVF 311
Query: 446 KKLIEID 452
++ E D
Sbjct: 312 DEMPERD 318
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 119/306 (38%), Gaps = 68/306 (22%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS--------------------------- 89
+K +L A+ +F+ + +T MI YA
Sbjct: 268 IKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMT 327
Query: 90 ---QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFE 146
Q A L+ DM + +P+ ++L +C + VH I +
Sbjct: 328 GYVQCKRGKEALRLFHDM-QEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVS 386
Query: 147 QYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDS 206
++ T LV+ YS+ GN I A ++F E+ ++N ++WTAMISG G
Sbjct: 387 LSVMLGTNLVDMYSKCGN-IEKAIRVFKEIPEKNALTWTAMISGLANHGHA--------- 436
Query: 207 MPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGML 266
DV AI +F+RM + ++P+++T + LSA H G++
Sbjct: 437 ----DV------------------AIKYFQRM---IELGLQPDEITFIGVLSACCHAGLV 471
Query: 267 QLGKVIHGY-VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS-KKRLTSWNSMIN 324
+ G+ V + L+ + ++D+ G+ G L EA + + W ++
Sbjct: 472 KEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFF 531
Query: 325 SFALHG 330
+ +HG
Sbjct: 532 ACRMHG 537
>gi|297742136|emb|CBI33923.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 244/449 (54%), Gaps = 62/449 (13%)
Query: 104 MVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSG 163
MVR+ PN + +P ++K C ++ + +H +I+K GFE V +L++ YS G
Sbjct: 1 MVRKCV-APNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCG 59
Query: 164 ------------------------------NDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+IG AR+LF+EM +R++ SW +MI+GY
Sbjct: 60 RIGDARAMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVG 119
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME--VSDNIR---- 247
GD+ A LF+ MP RD+ +WN +I G Q A F M VS NI
Sbjct: 120 NGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALY 179
Query: 248 ---------------------PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG-LDLDS 285
PN+ TLV L+A H G L GK IH Y+ N ++ D
Sbjct: 180 VRIKDYDECLRMFDKMMGETMPNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDV 239
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
+S AL+ MY KCG++ AR FD+ S + + SWNSMI + +HGQ++ ++ +F +M
Sbjct: 240 LLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDM--- 296
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
+ P+ TFI +L+AC H G++ +G YF LM + Y+IEP++EHYGC+VDLLGRAG
Sbjct: 297 EKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGL 356
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANI 465
++ E+++ M +E +WG+LL+ C+ + ++ AE K+LIE++P + G ++L+NI
Sbjct: 357 MKDLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNI 416
Query: 466 YGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
Y GKWD+V VRKM+K+R KT G S
Sbjct: 417 YAAEGKWDDVEIVRKMMKERGLTKTTGLS 445
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/469 (34%), Positives = 255/469 (54%), Gaps = 25/469 (5%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L L AR +FD + TP+ Y +++ + + A A L+ M R N +
Sbjct: 111 LGRLADARHLFDRIPTPDAVSYNTLLSCHFAS-GDADGARRLFASMPVRDVVSWNTMV-- 167
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVET----ALVNSYSRSGNDIGIARKLFD 174
S +K + K+ F PV + A+V+ ++ S D+ A + F
Sbjct: 168 -----------SGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACS-RDMSAAEEWFR 215
Query: 175 EMSDR-NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
++ + V WTAM+SGY +G++ A F++MP R++ +WN+V+AG +N DA+
Sbjct: 216 NAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALR 275
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
FR M E N++PN TL L + L GK IH + + L + + +L+
Sbjct: 276 LFRTMVREA--NVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVS 333
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
MY KCG L A + F + + +WN+MI+ +A HG + +I +FE M +D + P+
Sbjct: 334 MYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERM---KDEGVEPN 390
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
+TF+++L AC H GL + G F+ M + Y IEP+++HY C+VDLL RAG+ E A++++
Sbjct: 391 WITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLI 450
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
+ M EP +G+LL C++Y +FAE A KLIE DP + G + LANIY +WD
Sbjct: 451 RSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWD 510
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+V +VR+ +KD KTPG SWIE+ +H+F S D+ HP+ I++ L
Sbjct: 511 DVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKL 559
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 154/337 (45%), Gaps = 27/337 (8%)
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQI-------VKSGFEQYPVVETA----LVNSYS 160
P++ + P L S S T V + + F P TA L+ Y+
Sbjct: 49 PSRLLAPTPLASARSHTCSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYA 108
Query: 161 RSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIA 220
R+ + AR LFD + + VS+ ++S + GD A LF SMP RDV +WN++++
Sbjct: 109 RALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVS 168
Query: 221 GCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNG 280
G +++G +A + F + M V +++ N + +S + + + +RN
Sbjct: 169 GLSKSGAVEEAKAVF--LAMPVRNSVSWNAM-----VSGFACSRDMSAAE----EWFRNA 217
Query: 281 LDL-DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
+ D+ + A++ Y G++ +A F+ + L SWN+++ + + +++++ +F
Sbjct: 218 PEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLF 277
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
M+R + N++P+ T S+L C++ + G+ + K + + LV +
Sbjct: 278 RTMVR--EANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMK-LPLSRNLTVGTSLVSM 334
Query: 400 LGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
+ G A ++ M D V W ++++G +G
Sbjct: 335 YCKCGDLSSACKLFGEMHTR-DVVAWNAMISGYAQHG 370
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/513 (32%), Positives = 272/513 (53%), Gaps = 50/513 (9%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYA--FKLVRFCTLKLSN--LTYARFIFDHLT 73
+I+++C ++H+KQ+Q+ L T GQ +L+ C L S L YA I H+
Sbjct: 6 SIIQKCTTLSHIKQVQAHLLTTGQFNLRISPSRTRLLEHCALSPSPAYLPYAAHIHRHIP 65
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
P+T + A++ A P H + A + ++ P+ + L + L T
Sbjct: 66 HPSTNDFNALLRGLARGP-HPTHALTFLSTIL-----HPDALTFSFSLIASARALALSET 119
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+H+ +++ G +++ T +I Y +
Sbjct: 120 SQIHSHLLRRGCHA--------------------------------DILLGTTLIDAYAK 147
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
GD+ +A +FD +P RDV AWN++IAG Q S+A++ F RM E + N++++
Sbjct: 148 CGDLDSAQRVFDEIPLRDVAAWNALIAGLAQGSKSSEALALFNRMRAE---GEKINEISV 204
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR-NS 312
+ AL+A G L+ G+ +H V + LD++ + NA+IDMY KCG + R F
Sbjct: 205 LGALAACSQLGALRAGEGVHACVRKMDLDINVQVCNAVIDMYAKCGFADKGFRVFSTMTC 264
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
K + +WN+MI +FA+HG ++ +FEEM + Q + D VT++++L AC H GLVE+
Sbjct: 265 GKSVVTWNTMIMAFAMHGDGCRALELFEEMGKTQ---VEMDSVTYLAVLCACNHAGLVEE 321
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G F M + ++HYG +VDLLGRAGR EA ++ M I PD V+W SLL C
Sbjct: 322 GVRLFDEMVGR-GVNRNVKHYGSVVDLLGRAGRLGEAYRIINSMPIVPDVVLWQSLLGAC 380
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
K YG + AE A +KL+E+ N+ G ++L+N+Y +W++V +VR+ +K R+ K PG
Sbjct: 381 KTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARERWEDVGRVREAMKSRDVRKVPG 440
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
S+IEV+ +H+F + D++HP EIY L+ +
Sbjct: 441 FSYIEVEGVIHKFVNGDQSHPDWREIYAKLDEI 473
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/469 (34%), Positives = 255/469 (54%), Gaps = 25/469 (5%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L L AR +FD + TP+ Y +++ + + A A L+ M R N +
Sbjct: 62 LGRLADARHLFDRIPTPDAVSYNTLLSCHFAS-GDADGARRLFASMPVRDVVSWNTMV-- 118
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVET----ALVNSYSRSGNDIGIARKLFD 174
S +K + K+ F PV + A+V+ ++ S D+ A + F
Sbjct: 119 -----------SGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACS-RDMSAAEEWFR 166
Query: 175 EMSDR-NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
++ + V WTAM+SGY +G++ A F++MP R++ +WN+V+AG +N DA+
Sbjct: 167 NAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALR 226
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
FR M E N++PN TL L + L GK IH + + L + + +L+
Sbjct: 227 LFRTMVREA--NVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVS 284
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
MY KCG L A + F + + +WN+MI+ +A HG + +I +FE M +D + P+
Sbjct: 285 MYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERM---KDEGVEPN 341
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
+TF+++L AC H GL + G F+ M + Y IEP+++HY C+VDLL RAG+ E A++++
Sbjct: 342 WITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLI 401
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
+ M EP +G+LL C++Y +FAE A KLIE DP + G + LANIY +WD
Sbjct: 402 RSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWD 461
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+V +VR+ +KD KTPG SWIE+ +H+F S D+ HP+ I++ L
Sbjct: 462 DVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKL 510
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 143/300 (47%), Gaps = 20/300 (6%)
Query: 142 KSGFEQYPVVETA----LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
+ F P TA L+ Y+R+ + AR LFD + + VS+ ++S + GD
Sbjct: 37 EEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDA 96
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
A LF SMP RDV +WN++++G +++G +A + F + M V +++ N + +
Sbjct: 97 DGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVF--LAMPVRNSVSWNAM-----V 149
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDL-DSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
S + + + +RN + D+ + A++ Y G++ +A F+ + L
Sbjct: 150 SGFACSRDMSAAE----EWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNL 205
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
SWN+++ + + +++++ +F M+R + N++P+ T S+L C++ + G+
Sbjct: 206 VSWNAVVAGYVKNSHADDALRLFRTMVR--EANVQPNASTLSSVLLGCSNLSALGFGKQI 263
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
+ K + + LV + + G A ++ M D V W ++++G +G
Sbjct: 264 HQWCMK-LPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTR-DVVAWNAMISGYAQHG 321
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 174/513 (33%), Positives = 262/513 (51%), Gaps = 45/513 (8%)
Query: 17 LAILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
L+IL C+ L K + S ++ G S L+ + +L AR +F +
Sbjct: 334 LSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA-RCGDLPKARELFYTMP 392
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
+ + A+I YA + A LY+ M G +P + + H+L +C +
Sbjct: 393 KRDLISWNAIIAGYARREDRGE-AMRLYKQMQSEG-VKPGRVTFLHLLSACANSSAYADG 450
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
KM+H I++SG + + AL+N Y R G+
Sbjct: 451 KMIHEDILRSGIKSNGHLANALMNMYRRCGS----------------------------- 481
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
+ A ++F+ RDV +WNS+IAG Q+G + A F+ M E + P+ +T
Sbjct: 482 ---LMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNE---ELEPDNITF 535
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
LS + L+LGK IHG + +GL LD + NALI+MY +CGSL++AR F
Sbjct: 536 ASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQH 595
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP-DGVTFISLLNACTHGGLVEQ 372
+ + SW +MI A G+ +I +F +M Q+ RP DG TF S+L+AC H GLV +
Sbjct: 596 RDVMSWTAMIGGCADQGEDMKAIELFWQM---QNEGFRPPDGSTFTSILSACNHAGLVLE 652
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G F M Y + P IEHYGCLV LLGRA RF+EA ++ M PD VW +LL C
Sbjct: 653 GYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGAC 712
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+I+G AE A ++++ N I+L+N+Y G+WD+V K+R++++ R K PG
Sbjct: 713 RIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPG 772
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
SWIEVD +H+F + D++HP T EIY L+ +
Sbjct: 773 RSWIEVDNIIHEFIAADRSHPETAEIYAELKRL 805
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 193/422 (45%), Gaps = 52/422 (12%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K +L AR +F ++ + Y M+ YA Q A+ L+ M G P++ Y
Sbjct: 175 KCGDLPRARQVFAGISPRDVVSYNTMLGLYA-QKAYVKECLGLFGQMSSEG-ISPDKVTY 232
Query: 118 PHVLK--SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
++L + P +L+ K +H V+ G +NS R G
Sbjct: 233 INLLDAFTTPSMLDE--GKRIHKLTVEEG-----------LNSDIRVG------------ 267
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
TA+++ R GD+ +A F + DRDV +N++IA Q+G +A +
Sbjct: 268 ---------TALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQY 318
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
RM SD + N+ T + L+A + L+ GK+IH ++ +G D I NALI MY
Sbjct: 319 YRM---RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMY 375
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
+CG L +AR F K+ L SWN++I +A ++ ++++M Q ++P V
Sbjct: 376 ARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQM---QSEGVKPGRV 432
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF+ LL+AC + G+ + + ++ I+ L+++ R G EA V +G
Sbjct: 433 TFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEG 491
Query: 416 MKIEPDEVVWGSLLNGCKIYG--RTDFAEFAVKKLIEIDPNNGGYGIMLANIYG----EL 469
+ D + W S++ G +G T + F + E++P+N + +L+ EL
Sbjct: 492 TQAR-DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALEL 550
Query: 470 GK 471
GK
Sbjct: 551 GK 552
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 198/436 (45%), Gaps = 50/436 (11%)
Query: 2 VSVTNQLNQTLNQQV--LAILERCNH---INHLKQLQSFLTTLGQSQTNFYAFKLVRFCT 56
VS T+Q T + +A+L+ C + K++ + + G F + L+
Sbjct: 14 VSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINM-Y 72
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K ++ A +F + + + ++I+ YA Q AF L+ +M G PN+
Sbjct: 73 VKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQ-GFKKKAFQLFEEMQNAGFI-PNKIT 130
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
Y +L +C E K +H+QI+K+G+++ P V+ +L
Sbjct: 131 YISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSL--------------------- 169
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+S Y + GD+ A +F + RDV ++N+++ Q + + F
Sbjct: 170 -----------LSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFG 218
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+M S+ I P++VT + L A ML GK IH GL+ D + AL+ M
Sbjct: 219 QMS---SEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCV 275
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
+CG + A++AF + + + +N++I + A HG +++ FE+ R + + + T
Sbjct: 276 RCGDVDSAKQAFKGIADRDVVVYNALIAALAQHG---HNVEAFEQYYRMRSDGVALNRTT 332
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKT-YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
++S+LNAC+ +E G+ +++ + + QI + L+ + R G +A E+
Sbjct: 333 YLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGN--ALISMYARCGDLPKARELFYT 390
Query: 416 MKIEPDEVVWGSLLNG 431
M + D + W +++ G
Sbjct: 391 MP-KRDLISWNAIIAG 405
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 153/337 (45%), Gaps = 43/337 (12%)
Query: 103 DMVRRGQPQP---NQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSY 159
D+ QP+P ++ Y +L++C K +H Q+V++G
Sbjct: 13 DVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGV-------------- 58
Query: 160 SRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVI 219
G DI ++ L I+ Y + + +A +F MP RDV +WNS+I
Sbjct: 59 ---GPDIFLSNLL---------------INMYVKCRSVLDAHQVFKEMPRRDVISWNSLI 100
Query: 220 AGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN 279
+ Q G A F M + PN++T + L+A L+ GK IH + +
Sbjct: 101 SCYAQQGFKKKAFQLFEEMQ---NAGFIPNKITYISILTACYSPAELENGKKIHSQIIKA 157
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
G D + N+L+ MYGKCG L AR+ F S + + S+N+M+ +A + + +F
Sbjct: 158 GYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLF 217
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
+M I PD VT+I+LL+A T ++++G+ KL T + I LV +
Sbjct: 218 GQM---SSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKL-TVEEGLNSDIRVGTALVTM 273
Query: 400 LGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
R G + A + KG+ + D VV+ +L+ +G
Sbjct: 274 CVRCGDVDSAKQAFKGIA-DRDVVVYNALIAALAQHG 309
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 123/250 (49%), Gaps = 17/250 (6%)
Query: 241 EVSDNIRP-----NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
+VS+ +P ++ T V L +L K IH + G+ D F+SN LI+MY
Sbjct: 13 DVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMY 72
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KC S+ +A + F ++ + SWNS+I+ +A G + + +FEEM Q+ P+ +
Sbjct: 73 VKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEM---QNAGFIPNKI 129
Query: 356 TFISLLNACTHGGLVEQGRA-YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
T+IS+L AC +E G+ + +++ Y+ +P++++ L+ + G+ G A +V
Sbjct: 130 TYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFA 187
Query: 415 GMKIEPDEVVWGSLLNGC---KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGK 471
G I P +VV + + G K Y + F I P+ Y I L + +
Sbjct: 188 G--ISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTY-INLLDAFTTPSM 244
Query: 472 WDEVRKVRKM 481
DE +++ K+
Sbjct: 245 LDEGKRIHKL 254
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 254/464 (54%), Gaps = 10/464 (2%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ +FD + NT + MI YA Q + A L +++ R G P+ + +C
Sbjct: 372 AKELFDKMPFRNTISWAGMIAGYA-QNGRSEEALGLLQELHRSGM-LPSLSSLTSIFFAC 429
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+++ VH+ VK G + AL+ Y + N + AR++F M +++VSW
Sbjct: 430 SNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRN-MEYARQVFSRMVTKDIVSW 488
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+ ++ + + A + FD+M RD +W ++I+ ++A+ F+ M E
Sbjct: 489 NSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCE--- 545
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ PN L L G G ++G+ IH + G+D + ++NALI MY KCG ++
Sbjct: 546 HELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC-ADS 604
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
RR FD ++ + +WN++I +A HG +I +++ M + + P+ VTF+ LLNAC
Sbjct: 605 RRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHM---ESAGVLPNEVTFVGLLNAC 661
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLV++G +FK M++ Y + P EHY C+VDLLGR G + A + + M IEPD V+
Sbjct: 662 SHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVI 721
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
W +LL CKI+ + + A +KL I+P+N G +ML+NIY LG W EV +VRK++K
Sbjct: 722 WSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQ 781
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
+ K PGCSW ++ ++H F + DK H + EEI LE + L
Sbjct: 782 QGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTL 825
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 172/404 (42%), Gaps = 82/404 (20%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +F+ + N +T MI+ Y H A+ ++ M R G P+Q + L +
Sbjct: 177 ARNLFEKMPERNLVSWTVMISGYGRIENHGK-AWDIFCKMHREGL-LPDQSNFASALSAV 234
Query: 125 P-----DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
DVLES + +K+GFE+ V+ TA++N YSR + + A K F+ M +R
Sbjct: 235 KGLGNLDVLES-----LRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIER 289
Query: 180 NVVSW-------------------------------TAMISGYTRVGDIKNAASLFDSMP 208
N +W TA+I+G + G I +A LF+ +P
Sbjct: 290 NEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIP 349
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRM---------GMEVS---------------- 243
+ V +WN++I G QNG+ ++A F +M GM
Sbjct: 350 EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQE 409
Query: 244 ---DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ P+ +L A + L+ G +H + G +SF NALI MYGKC +
Sbjct: 410 LHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRN 469
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
++ AR+ F R K + SWNS + + +N + +E D+ + D V++ ++
Sbjct: 470 MEYARQVFSRMVTKDIVSWNSFLAALV-----QNDL--LDEARNTFDNMLSRDDVSWTTI 522
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
++A H + FK M E ++ + L LLG G
Sbjct: 523 ISAYAHAEQSNEAMGAFKTMF----CEHELPNSPILTILLGVCG 562
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 182/396 (45%), Gaps = 36/396 (9%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+L + AR +FD + + + +MI+AY +A LY D + G + +
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHN-GMPDAARDLY-DAISGGNMRTGAILL 103
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+ VLE+R ++ E+ V A+++ Y ++G DI +AR+LFD M
Sbjct: 104 SGYGR-LGRVLEAR-------RVFDGMLERNTVAWNAMISCYVQNG-DITMARRLFDAMP 154
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
R+V SW +M++GY + +A +LF+ MP+R++ +W +I+G + A F +
Sbjct: 155 SRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCK 214
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M E + P+Q ALSA+ G L + + + + G + D I A++++Y +
Sbjct: 215 MHRE---GLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSR 271
Query: 298 CGS-LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
S L A + F+ ++ +W++MI + + G+ + +I V+E D V
Sbjct: 272 DTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER-----------DPVK 320
Query: 357 FISLLNACTHG----GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
I+ A G G ++ R F+ + EP + + L+ + G EA E+
Sbjct: 321 SIACRTALITGLAQCGRIDDARILFEQIP-----EPIVVSWNALITGYMQNGMVNEAKEL 375
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL 448
M + + W ++ G GR++ A +++L
Sbjct: 376 FDKMPFR-NTISWAGMIAGYAQNGRSEEALGLLQEL 410
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 137/307 (44%), Gaps = 21/307 (6%)
Query: 2 VSVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN 61
V V Q N ++ + +C ++ + +Q+ S + T N + LV+
Sbjct: 446 VKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQN-----DL 500
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L AR FD++ + + +T +I+AYA ++ A ++ M PN I +L
Sbjct: 501 LDEARNTFDNMLSRDDVSWTTIISAYA-HAEQSNEAMGAFKTMFCE-HELPNSPILTILL 558
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
C + S+ + +HT +K G + +V AL++ Y + G +R++FD M +R++
Sbjct: 559 GVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG--CADSRRIFDLMEERDI 616
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDV----PAWNSVIAGCTQNGLFSDAISFFRR 237
+W +I+GY + G + A ++ M V + ++ C+ GL + FF+
Sbjct: 617 FTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKS 676
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M + P C + +G TG +Q + ++Y ++ D+ I +AL+ G
Sbjct: 677 MSQDYGLTPLPEHYA--CMVDLLGRTGDVQGAE---QFIYDMPIEPDTVIWSALL---GA 728
Query: 298 CGSLKEA 304
C K A
Sbjct: 729 CKIHKNA 735
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 163/443 (36%), Gaps = 129/443 (29%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI- 116
+L + AR +FD + NT + AMI+ Y Q + A L+ M R N +
Sbjct: 108 RLGRVLEARRVFDGMLERNTVAWNAMISCYV-QNGDITMARRLFDAMPSRDVSSWNSMLT 166
Query: 117 -YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
Y H L Q+V AR LF++
Sbjct: 167 GYCHSL-----------------QMVD--------------------------ARNLFEK 183
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSM------PD-------------------- 209
M +RN+VSWT MISGY R+ + A +F M PD
Sbjct: 184 MPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVL 243
Query: 210 -------------RDVPAWNSVIAGCTQN-GLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
RDV +++ +++ + AI FF M I N+ T
Sbjct: 244 ESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESM-------IERNEYTWST 296
Query: 256 ALSAIGH--------------------------TGMLQLGKVIHGYVYRNGLDLDSFIS- 288
++A+ H TG+ Q G++ + + +S
Sbjct: 297 MIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSW 356
Query: 289 NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDH 348
NALI Y + G + EA+ FD+ + SW MI +A +G+SE ++ + +E+ R
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHR---S 413
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC--LVDLLGRAGRF 406
+ P + S+ AC++ +E G L K + Q + C L+ + G+
Sbjct: 414 GMLPSLSSLTSIFFACSNIVALETGTQVHSLAVK---VGCQFNSFACNALITMYGKCRNM 470
Query: 407 EEALEVVKGMKIEPDEVVWGSLL 429
E A +V M + D V W S L
Sbjct: 471 EYARQVFSRM-VTKDIVSWNSFL 492
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 109/233 (46%), Gaps = 34/233 (14%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+A I R+G + A +FD+MP RD+ AWNS+I+ NG+ A + +
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAIS---GG 94
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHG-YVYRNGLDLDSFISNALIDMYGKCGSLKE 303
N+R + L +G +LG+V+ V+ L+ ++ NA+I Y + G +
Sbjct: 95 NMRTGAILL---------SGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITM 145
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
ARR FD + ++SWNSM+ + Q ++ +FE+M + N+ V++ +++
Sbjct: 146 ARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKM---PERNL----VSWTVMISG 198
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+G + G+A+ + K +R LL F AL VKG+
Sbjct: 199 --YGRIENHGKAW-DIFCKMHR-----------EGLLPDQSNFASALSAVKGL 237
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 127/321 (39%), Gaps = 80/321 (24%)
Query: 153 TALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI------------------------ 188
+A + R G +G AR++FD M R++++W +MI
Sbjct: 38 SARIRDLGRLGR-VGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNM 96
Query: 189 -------SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
SGY R+G + A +FD M +R+ AWN++I+ QNG + A F M
Sbjct: 97 RTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM--- 153
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
P++ D+ S+ N+++ Y +
Sbjct: 154 ------PSR-------------------------------DVSSW--NSMLTGYCHSLQM 174
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+AR F++ ++ L SW MI+ + G+ EN ++ + + PD F S L
Sbjct: 175 VDARNLFEKMPERNLVSWTVMISGY---GRIENHGKAWDIFCKMHREGLLPDQSNFASAL 231
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGR-AGRFEEALEVVKGMKIEP 420
+A G ++ + L KT E + ++++ R + A++ + M IE
Sbjct: 232 SAVKGLGNLDVLESLRVLALKT-GFERDVVIGTAILNVYSRDTSVLDTAIKFFESM-IER 289
Query: 421 DEVVWGSLLNGCKIYGRTDFA 441
+E W +++ GR D A
Sbjct: 290 NEYTWSTMIAALSHGGRIDAA 310
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 254/464 (54%), Gaps = 10/464 (2%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ +FD + NT + MI YA Q + A L +++ R G P+ + +C
Sbjct: 372 AKELFDKMPFRNTISWAGMIAGYA-QNGRSEEALGLLQELHRSGM-LPSLSSLTSIFFAC 429
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+++ VH+ VK G + AL+ Y + N + AR++F M +++VSW
Sbjct: 430 SNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRN-MEYARQVFSRMVTKDIVSW 488
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+ ++ + + A + FD+M RD +W ++I+ ++A+ F+ M E
Sbjct: 489 NSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCE--- 545
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ PN L L G G ++G+ IH + G+D + ++NALI MY KCG ++
Sbjct: 546 HELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC-ADS 604
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
RR FD ++ + +WN++I +A HG +I +++ M + + P+ VTF+ LLNAC
Sbjct: 605 RRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHM---ESAGVLPNEVTFVGLLNAC 661
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+H GLV++G +FK M++ Y + P EHY C+VDLLGR G + A + + M IEPD V+
Sbjct: 662 SHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVI 721
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
W +LL CKI+ + + A +KL I+P+N G +ML+NIY LG W EV +VRK++K
Sbjct: 722 WSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQ 781
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
+ K PGCSW ++ ++H F + DK H + EEI LE + L
Sbjct: 782 QGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTL 825
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 172/404 (42%), Gaps = 82/404 (20%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +F+ + N +T MI+ Y H A+ ++ M R G P+Q + L +
Sbjct: 177 ARNLFEKMPERNLVSWTVMISGYGRIENHGK-AWDIFCKMHREGL-LPDQSNFASALSAV 234
Query: 125 P-----DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
DVLES + +K+GFE+ V+ TA++N YSR + + A K F+ M +R
Sbjct: 235 KGLGNLDVLES-----LRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIER 289
Query: 180 NVVSW-------------------------------TAMISGYTRVGDIKNAASLFDSMP 208
N +W TA+I+G + G I +A LF+ +P
Sbjct: 290 NEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIP 349
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRM---------GMEVS---------------- 243
+ V +WN++I G QNG+ ++A F +M GM
Sbjct: 350 EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQE 409
Query: 244 ---DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ P+ +L A + L+ G +H + G +SF NALI MYGKC +
Sbjct: 410 LHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRN 469
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
++ AR+ F R K + SWNS + + +N + +E D+ + D V++ ++
Sbjct: 470 MEYARQVFSRMVTKDIVSWNSFLAALV-----QNDL--LDEARNTFDNMLSRDDVSWTTI 522
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
++A H + FK M E ++ + L LLG G
Sbjct: 523 ISAYAHAEQSNEAMGAFKTMF----CEHELPNSPILTILLGVCG 562
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 182/396 (45%), Gaps = 36/396 (9%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+L + AR +FD + + + +MI+AY +A LY D + G + +
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHN-GMPDAARDLY-DAISGGNMRTGAILL 103
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
+ VLE+R ++ E+ V A+++ Y ++G DI +AR+LFD M
Sbjct: 104 SGYGR-LGRVLEAR-------RVFDGMLERNTVAWNAMISCYVQNG-DITMARRLFDAMP 154
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
R+V SW +M++GY + +A +LF+ MP+R++ +W +I+G + A F +
Sbjct: 155 SRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCK 214
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M E + P+Q ALSA+ G L + + + + G + D I A++++Y +
Sbjct: 215 MHRE---GLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSR 271
Query: 298 CGS-LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
S L A + F+ ++ +W++MI + + G+ + +I V+E D V
Sbjct: 272 DTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER-----------DPVK 320
Query: 357 FISLLNACTHG----GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
I+ A G G ++ R F+ + EP + + L+ + G EA E+
Sbjct: 321 SIACRTALITGLAQCGRIDDARILFEQIP-----EPIVVSWNALITGYMQNGMVNEAKEL 375
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL 448
M + + W ++ G GR++ A +++L
Sbjct: 376 FDKMPFR-NTISWAGMIAGYAQNGRSEEALGLLQEL 410
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 137/307 (44%), Gaps = 21/307 (6%)
Query: 2 VSVTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN 61
V V Q N ++ + +C ++ + +Q+ S + T N + LV+
Sbjct: 446 VKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQN-----DL 500
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L AR FD++ + + +T +I+AYA ++ A ++ M PN I +L
Sbjct: 501 LDEARNTFDNMLSRDDVSWTTIISAYA-HAEQSNEAMGAFKTMFCE-HELPNSPILTILL 558
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
C + S+ + +HT +K G + +V AL++ Y + G +R++FD M +R++
Sbjct: 559 GVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG--CADSRRIFDLMEERDI 616
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDV----PAWNSVIAGCTQNGLFSDAISFFRR 237
+W +I+GY + G + A ++ M V + ++ C+ GL + FF+
Sbjct: 617 FTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKS 676
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M + P C + +G TG +Q + ++Y ++ D+ I +AL+ G
Sbjct: 677 MSQDYGLTPLPEHYA--CMVDLLGRTGDVQGAE---QFIYDMPIEPDTVIWSALL---GA 728
Query: 298 CGSLKEA 304
C K A
Sbjct: 729 CKIHKNA 735
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 163/443 (36%), Gaps = 129/443 (29%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI- 116
+L + AR +FD + NT + AMI+ Y Q + A L+ M R N +
Sbjct: 108 RLGRVLEARRVFDGMLERNTVAWNAMISCYV-QNGDITMARRLFDAMPSRDVSSWNSMLT 166
Query: 117 -YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
Y H L Q+V AR LF++
Sbjct: 167 GYCHSL-----------------QMVD--------------------------ARNLFEK 183
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSM------PD-------------------- 209
M +RN+VSWT MISGY R+ + A +F M PD
Sbjct: 184 MPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVL 243
Query: 210 -------------RDVPAWNSVIAGCTQN-GLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
RDV +++ +++ + AI FF M I N+ T
Sbjct: 244 ESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESM-------IERNEYTWST 296
Query: 256 ALSAIGH--------------------------TGMLQLGKVIHGYVYRNGLDLDSFIS- 288
++A+ H TG+ Q G++ + + +S
Sbjct: 297 MIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSW 356
Query: 289 NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDH 348
NALI Y + G + EA+ FD+ + SW MI +A +G+SE ++ + +E+ R
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHR---S 413
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC--LVDLLGRAGRF 406
+ P + S+ AC++ +E G L K + Q + C L+ + G+
Sbjct: 414 GMLPSLSSLTSIFFACSNIVALETGTQVHSLAVK---VGCQFNSFACNALITMYGKCRNM 470
Query: 407 EEALEVVKGMKIEPDEVVWGSLL 429
E A +V M + D V W S L
Sbjct: 471 EYARQVFSRM-VTKDIVSWNSFL 492
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 109/233 (46%), Gaps = 34/233 (14%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+A I R+G + A +FD+MP RD+ AWNS+I+ NG+ A + +
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAIS---GG 94
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHG-YVYRNGLDLDSFISNALIDMYGKCGSLKE 303
N+R + L +G +LG+V+ V+ L+ ++ NA+I Y + G +
Sbjct: 95 NMRTGAILL---------SGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITM 145
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
ARR FD + ++SWNSM+ + Q ++ +FE+M + N+ V++ +++
Sbjct: 146 ARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKM---PERNL----VSWTVMISG 198
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+G + G+A+ + K +R LL F AL VKG+
Sbjct: 199 --YGRIENHGKAW-DIFCKMHR-----------EGLLPDQSNFASALSAVKGL 237
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 127/321 (39%), Gaps = 80/321 (24%)
Query: 153 TALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI------------------------ 188
+A + R G +G AR++FD M R++++W +MI
Sbjct: 38 SARIRDLGRLGR-VGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNM 96
Query: 189 -------SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
SGY R+G + A +FD M +R+ AWN++I+ QNG + A F M
Sbjct: 97 RTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM--- 153
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
P++ D+ S+ N+++ Y +
Sbjct: 154 ------PSR-------------------------------DVSSW--NSMLTGYCHSLQM 174
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+AR F++ ++ L SW MI+ + G+ EN ++ + + PD F S L
Sbjct: 175 VDARNLFEKMPERNLVSWTVMISGY---GRIENHGKAWDIFCKMHREGLLPDQSNFASAL 231
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGR-AGRFEEALEVVKGMKIEP 420
+A G ++ + L KT E + ++++ R + A++ + M IE
Sbjct: 232 SAVKGLGNLDVLESLRVLALKT-GFERDVVIGTAILNVYSRDTSVLDTAIKFFESM-IER 289
Query: 421 DEVVWGSLLNGCKIYGRTDFA 441
+E W +++ GR D A
Sbjct: 290 NEYTWSTMIAALSHGGRIDAA 310
>gi|224058579|ref|XP_002299552.1| predicted protein [Populus trichocarpa]
gi|222846810|gb|EEE84357.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/504 (31%), Positives = 273/504 (54%), Gaps = 20/504 (3%)
Query: 6 NQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL-KLSNLTY 64
NQ + L++LE C QL + LT LG + +L+ + ++ + +N+ Y
Sbjct: 18 NQFQSFSLKSCLSLLEICKFTTEFAQLHARLTKLGFIKNPLALTRLLCYSSISQYANINY 77
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ IF+ PNT+ Y MI YA Q +A SL+ M+ N+ +P VLK+C
Sbjct: 78 AQSIFNFDKNPNTFAYNVMIRGYA-QREKPENALSLFYSMLCNANSGQNKLTFPFVLKAC 136
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
V K VH + K G + V+ +L++ YS G IG A ++F+++ D +VVSW
Sbjct: 137 SQVRAIEEGKQVHGLVFKHGLSEDLFVQNSLISMYSSCGL-IGFACQVFNKIDDPDVVSW 195
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+MISG +G ++ +FD M R + WN +I G + GL +A F +M
Sbjct: 196 NSMISGLVDLGFVEEGKQMFDRMSKRSLVTWNCLIDGYVKAGLLMEARELFDQM------ 249
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ T+V L+A + G L+ G+ + ++ +NG+D++S + AL++M+ KCGS++ A
Sbjct: 250 -----RFTMVSVLTACSYLGALEQGEWMQAHIEKNGIDVNSVLGTALVEMFAKCGSIERA 304
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F ++ + +WNS+I+ A HG + + +F +M+R N DG+ F+ LL+ C
Sbjct: 305 LSVFKSIEERDVGAWNSIIHKLAAHGHGQEAFAIFSDMLR---SNTLLDGIIFLGLLSVC 361
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK---GMKIEPD 421
H GLV++G+ +F+LM++ Y + P++EHYGC+VDLL A EEA +++ +++
Sbjct: 362 RHLGLVDEGKRFFQLMSEEYGLVPKVEHYGCMVDLLCHADLLEEARDLIDSSHASQMKSS 421
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
+WG+LL E+A K L+++DP +G +L+N+Y G +++ +VR
Sbjct: 422 VPMWGALLGVSCQLKNIVMGEYAAKHLLQLDPFDGNCYTVLSNLYSAAGLYEKAIEVRNE 481
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQF 505
+K + K PG S +E+D V F
Sbjct: 482 MKKQGLEKIPGSSSMEIDGLVLDF 505
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 177/575 (30%), Positives = 287/575 (49%), Gaps = 90/575 (15%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP-NTYLYTAMITAYA 88
K++ S++ G + L+ + K + + +A IF T N + + A+I+ +
Sbjct: 57 KEIHSYMLINGFLNSPLSITSLINMYS-KCNQMNFALSIFSDPTHEINVFAFNAIISGFI 115
Query: 89 SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSG---- 144
+ F Y+ M G P++F +P +K+C DVLE K +H + K G
Sbjct: 116 TN-GFPEEGFEFYQKMRNEGVI-PDKFTFPCAIKACLDVLE---IKKIHGLLFKFGLELD 170
Query: 145 -----------------------FEQYP----VVETALVNSYSRSGNDIGIARKLFDEMS 177
FE+ P V+ A+VN Y++ G + + F M+
Sbjct: 171 VFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQ-FEMVLETFRRMN 229
Query: 178 DRNVV----SWTAMISGYTRVGDIKN---------------------------------- 199
D +VV + T ++S + +GD+ N
Sbjct: 230 DESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIE 289
Query: 200 -AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALS 258
A +F+ M ++D+ +WNS+++ Q G + RM + I+P+ VT+ L
Sbjct: 290 DALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRM---LGAGIQPDLVTVTTVLP 346
Query: 259 AIGHTGMLQLGKVIHGYVYRNGL-----DLDS-FISNALIDMYGKCGSLKEARRAFDRNS 312
A H L G+ IHGY+ +GL D+D + NA+IDMY KCGS+++A F+R S
Sbjct: 347 ACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMS 406
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
K + SWN MI + +HG ++ +F M Q ++PD VTF+ +L+AC+H G V Q
Sbjct: 407 NKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQ---LKPDEVTFVGVLSACSHAGFVSQ 463
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
GR + M Y + P IEHY C++D+LGRAG+ +EA E+ M IE + VVW +LL C
Sbjct: 464 GRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAAC 523
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+++ AE A +++ E++P + G ++++N+YG +G+++EV +VR ++ +N KTPG
Sbjct: 524 RLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPG 583
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
CSWIE+ VH F S D+ HP IY L S+ A
Sbjct: 584 CSWIELKNGVHVFVSADRAHPEAHSIYAGLNSLTA 618
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 11/185 (5%)
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS-NALIDMYGKCGSLKEARRA 307
N T + +L A H L GK IH Y+ NG L+S +S +LI+MY KC + A
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGF-LNSPLSITSLINMYSKCNQMNFALSI 94
Query: 308 F-DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F D + + ++N++I+ F +G E FE + ++ + PD TF + AC
Sbjct: 95 FSDPTHEINVFAFNAIISGFITNGFPEEG---FEFYQKMRNEGVIPDKFTFPCAIKACLD 151
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
V + + L+ K + +E + LV+ + G E A + + I D V+W
Sbjct: 152 ---VLEIKKIHGLLFK-FGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIR-DVVLWN 206
Query: 427 SLLNG 431
+++NG
Sbjct: 207 AMVNG 211
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/502 (31%), Positives = 259/502 (51%), Gaps = 41/502 (8%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMIT 85
+N+ +++ + G ++F A L K L Y +F+ ++ + +T +IT
Sbjct: 233 LNYGREIHAQAMKKGFDVSSFVANTLATMYN-KCGKLEYGLTLFEKMSMRDVVSWTTIIT 291
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
+ + R +R PN++ + V+ C ++ + +H I+ G
Sbjct: 292 TLVQMGQEECAVQAFIR--MRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGL 349
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFD 205
VE +++ Y++ G + +++ +F
Sbjct: 350 AASLSVENSIMTMYAKCGQ--------------------------------LTSSSVIFH 377
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
M RD+ +W+++IAG Q G S+A M ME +P + L LSA G+ +
Sbjct: 378 EMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRME---GPKPTEFALASVLSACGNMAI 434
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
L+ GK +H YV GL+ + + +ALI+MY KCGS++EA R FD + SW +MIN
Sbjct: 435 LEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMING 494
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
+A HG S I +FE++ R +RPD VTFI +L+AC+H GLV+ G YF M+K Y+
Sbjct: 495 YAEHGYSREVIDLFEKIPRV---GLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQ 551
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
I P EHYGC++DLL RAGR +A +++ M D+VVW +LL C+++G +
Sbjct: 552 ISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTA 611
Query: 446 KKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
+++++++PN G I LANIY GKW E +RK++K + K PG SWI+V V F
Sbjct: 612 ERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAF 671
Query: 506 HSLDKTHPRTEEIYDALESMVA 527
+ D++HP+ E+IY+ L+ + +
Sbjct: 672 VAGDRSHPQGEDIYNMLDLLAS 693
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 189/449 (42%), Gaps = 79/449 (17%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPN 76
L +LER N ++L Q F++ ++N +LV K +L AR +FD ++ +
Sbjct: 27 LQVLERSN--DNLSQNIHFISQTDLPESNKQLKELV-----KTGHLGNARRMFDKMSQKD 79
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
+T +I+ Y + +S A L+++M + + FI K+C + +++
Sbjct: 80 EISWTTLISGYVN-ANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELL 138
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGD 196
H VK+G LVNS V +A++ YT+ G
Sbjct: 139 HGYAVKTG----------LVNS----------------------VFVGSALLDMYTKNGK 166
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
I +F MP R+V +W ++I G + G +A+ +F M + + T A
Sbjct: 167 IFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMW---RSRVEYDSYTFAIA 223
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
L A +G L G+ IH + G D+ SF++N L MY KCG L+ F++ S + +
Sbjct: 224 LKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDV 283
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
SW ++I + GQ E C + +R ++ ++ P+ TF ++++ C + +E G
Sbjct: 284 VSWTTIITTLVQMGQEE---CAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQL 340
Query: 377 FKL-----MTKTYRIEPQIE-------------------------HYGCLVDLLGRAGRF 406
L + + +E I + ++ + G
Sbjct: 341 HALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHV 400
Query: 407 EEALEVVKGMKIE---PDEVVWGSLLNGC 432
EA E++ M++E P E S+L+ C
Sbjct: 401 SEAFELLSWMRMEGPKPTEFALASVLSAC 429
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/514 (31%), Positives = 272/514 (52%), Gaps = 40/514 (7%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDH 71
++ +++L++C+++ KQ + + LG +F A LV C L ++ YA IF
Sbjct: 31 EKECVSLLKKCSNMEEFKQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQ 90
Query: 72 LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESR 131
+ ++ + M+ + + + A Y++M RG +P+ F YP +LK+C +
Sbjct: 91 MDELGSFQFNTMMRGHV-KDMNTEEALITYKEMAERG-VKPDNFTYPTLLKACARLPAVE 148
Query: 132 GTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
VH I+K G E ND+ + L IS Y
Sbjct: 149 EGMQVHAHILKLGLE-----------------NDVFVQNSL---------------ISMY 176
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
+ G+I ++F+ M +R V +W+++I G++SD + M E R +
Sbjct: 177 GKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNE--GYWRAEES 234
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
LV LSA H G L LG+ +HG++ RN L+ + +LI+MY KCGSL + F +
Sbjct: 235 ILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKM 294
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
+KK S++ MI+ A+HG + +F EM+ + + PD + ++ +LNAC+H GLV+
Sbjct: 295 AKKNKLSYSVMISGLAMHGYGREGLRIFTEML---EQGLEPDDIVYVGVLNACSHAGLVQ 351
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G F M + IEP I+HYGC+VDL+GRAG+ +EALE++K M +EP++V+W SLL+
Sbjct: 352 EGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSA 411
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
K++ E A K+L ++D ++L+N+Y + +W++V K R + + + P
Sbjct: 412 SKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQRP 471
Query: 492 GCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
G S +EV +++H+F S D HP++E +Y+ L M
Sbjct: 472 GFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQM 505
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/472 (34%), Positives = 254/472 (53%), Gaps = 19/472 (4%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L L AR +FD + P+T Y +++ + + A ++ M + N +
Sbjct: 59 LIRLADARRLFDSIPHPDTVSYNTLLSCHFAC-GDIDGARRVFSTMPVKDVTSWNTMVSG 117
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
L G + + + V A+V + + SG D+G A LF +
Sbjct: 118 ---------LSKNGASEEAAAMFRIMPVRNAVSWNAMVAALACSG-DMGAAEDLFRNAPE 167
Query: 179 R-NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+ + + WTAM+SGY G+++ A F +MP R++ +WN+V+AG +N DA+ F+
Sbjct: 168 KTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKT 227
Query: 238 MGMEVSDNI-RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M V D+I +PN TL L + L G+ +H + + L + + +L+ MY
Sbjct: 228 M---VEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYC 284
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG L +A + FD S K + +WN+MI+ +A HG +I +FE+M +D + PD +T
Sbjct: 285 KCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKM---KDEGVVPDWIT 341
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+++L AC H GL + G F+ M + Y+IEPQI+HY C+VDLL RAG E A+ ++ M
Sbjct: 342 LLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSM 401
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
EP +G+LL C++Y +FAEFA +KLIE DP N G + LANIY KW +V
Sbjct: 402 PFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANKWADVS 461
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
+VR+ +KD KTPG SW+E+ H+F S D+ HP+ I+D L+ + L
Sbjct: 462 RVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLGLIHDKLDRLQML 513
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 146/285 (51%), Gaps = 18/285 (6%)
Query: 155 LVNSYSRSGNDIGIA--RKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDV 212
L+ Y+++ I +A R+LFD + + VS+ ++S + GDI A +F +MP +DV
Sbjct: 49 LLAGYAKASGLIRLADARRLFDSIPHPDTVSYNTLLSCHFACGDIDGARRVFSTMPVKDV 108
Query: 213 PAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVI 272
+WN++++G ++NG +A + FR M V + + N +V AL+ G G +
Sbjct: 109 TSWNTMVSGLSKNGASEEAAAMFRI--MPVRNAVSWN--AMVAALACSGDMGAAE----- 159
Query: 273 HGYVYRNGLD-LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQ 331
++RN + D+ + A++ Y G++++A F + L SWN+++ + + +
Sbjct: 160 --DLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSR 217
Query: 332 SENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIE 391
+++++ VF+ M+ +D ++P+ T S+L C++ + GR + K + +
Sbjct: 218 ADDALRVFKTMV--EDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMK-LPLSRNVT 274
Query: 392 HYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
L+ + + G +A +V M + D V W ++++G +G
Sbjct: 275 VGTSLLSMYCKCGDLNDACKVFDEMSTK-DIVAWNAMISGYAQHG 318
>gi|345505214|gb|AEN99831.1| chlororespiratory reduction 4 [Brassica rapa]
Length = 612
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/493 (33%), Positives = 265/493 (53%), Gaps = 25/493 (5%)
Query: 20 LERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPN 76
L+ C+ + +K Q+ FL G F L+ +K L +AR +FD + +
Sbjct: 135 LKACSRLGFVKEGTQVHGFLIKTGTWSDLFLQNCLIGL-YIKCGCLGFARQVFDRMPQRD 193
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
+ Y +MI Y + SA L+ M R + L + ++ +
Sbjct: 194 SVSYNSMIDGYL-KCGLVESAGELFGLMPREKRN----------LITWNSMIGGYAQRAD 242
Query: 137 HTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+ F++ P + +++ Y + G I A+ LFD M R+VV+W MI GY
Sbjct: 243 GVNVAAKLFDEMPEKDLISWNSMIGGYVKHGR-IEDAKGLFDVMPRRDVVTWAIMIDGYG 301
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
++G + A +LFD MP RDV +NS+++G QN +A+ F ME ++ P++ +
Sbjct: 302 KLGLVHEAKTLFDQMPHRDVVVYNSMMSGXVQNRYHMEALEVFNH--MEKESHLTPDETS 359
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
LV LSA G L +H Y+ + ALIDMY KCGS++ A R F+
Sbjct: 360 LVIVLSAXAQLGRLSKAIDMHLYIVEKQFPSSGKLGVALIDMYSKCGSIQHAMRVFEGIE 419
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
K + WN+MI A+HG E++ F+ +++ + +I+PD +TF+ +LNAC+H GLV++
Sbjct: 420 SKSIDHWNAMIGGLAVHGLGESA---FDMLLQIERRSIKPDHITFVGVLNACSHSGLVKE 476
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G F+LM + ++IEP+++HYGC+VD+L R+G E A +++GM IEP++V+W + L C
Sbjct: 477 GLLCFELMRRKHKIEPRLQHYGCMVDILARSGSIELAKNLIEGMPIEPNDVIWRTFLTAC 536
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+ + E K LI N ++L+N+Y G W +VR+VR M+K++N K PG
Sbjct: 537 SHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASNGMWKDVRRVRTMMKEKNIEKIPG 596
Query: 493 CSWIEVDKQVHQF 505
CSWIE+D +VH+F
Sbjct: 597 CSWIELDGRVHEF 609
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 190/407 (46%), Gaps = 48/407 (11%)
Query: 64 YARFIFD--HLTTP----NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+AR +F H+++ + +L+ +I ++ S A L M+ G P ++F +
Sbjct: 74 FARCVFHEHHVSSSGEVEDPFLWNVVIKSH-SHGVDPRKALFLLCLMLENGVPV-DKFSF 131
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
LK+C + + VH ++K+G ++ L+ Y + G +G AR++FD M
Sbjct: 132 SLALKACSRLGFVKEGTQVHGFLIKTGTWSDLFLQNCLIGLYIKCGC-LGFARQVFDRMP 190
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMP--DRDVPAWNSVIAGCTQNGLFSDAISFF 235
R+ VS+ +MI GY + G +++A LF MP R++ WNS+I G Q +D ++
Sbjct: 191 QRDSVSYNSMIDGYLKCGLVESAGELFGLMPREKRNLITWNSMIGGYAQR---ADGVNVA 247
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYV--YRNGLDL----DSFISN 289
++ E+ + L+ S IG G V HG + + D+ D
Sbjct: 248 AKLFDEMPEK------DLISWNSMIG-------GYVKHGRIEDAKGLFDVMPRRDVVTWA 294
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
+ID YGK G + EA+ FD+ + + +NSM++ + ++ VF M + + +
Sbjct: 295 IMIDGYGKLGLVHEAKTLFDQMPHRDVVVYNSMMSGXVQNRYHMEALEVFNHMEK--ESH 352
Query: 350 IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG----CLVDLLGRAGR 405
+ PD + + +L+A + GR + Y +E Q G L+D+ + G
Sbjct: 353 LTPDETSLVIVLSA-----XAQLGRLSKAIDMHLYIVEKQFPSSGKLGVALIDMYSKCGS 407
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
+ A+ V +G++ + + W +++ G ++G E A L++I+
Sbjct: 408 IQHAMRVFEGIESKSID-HWNAMIGGLAVHG---LGESAFDMLLQIE 450
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/468 (34%), Positives = 250/468 (53%), Gaps = 42/468 (8%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMV-RRGQPQPNQFIYPH 119
+LTYA I + L+T N++ + MI AY+ P + A L+ M+ + P+P++F YP
Sbjct: 43 DLTYAHLILNSLSTQNSFFHNTMIRAYSQTP-DPTQALHLFLSMLCQPTSPRPDKFTYPF 101
Query: 120 VLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
+LKSC + + R K +H I KSG E V L++ YS G
Sbjct: 102 LLKSCARLKQPRVGKQLHGLIYKSGLESDRYVSNGLIHMYSSCGK--------------- 146
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
SG A +F M DRDV +W S+I G + +AI F M
Sbjct: 147 ---------SG--------RAYKVFGKMRDRDVVSWTSMIDGFVDDDRALEAIRLFEEM- 188
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCG 299
V D + PN+ T+V L A G + +G+ + G + + L++ + ALIDMY KCG
Sbjct: 189 --VEDGVEPNEATVVSVLRACADAGAVGMGRRVQGVIEERKIGLEANVRTALIDMYAKCG 246
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
S+ AR+ FD K + +W +MI+ A HG E ++ +F++M + +RPD T +
Sbjct: 247 SIGSARKVFDGIVNKDVFAWTAMISGLANHGLCEEAVTLFDQM---ESFGLRPDERTMTA 303
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIE 419
+L+AC + G +G AYF M Y I+P I+HYGC+VDLL R G +EA E ++ M IE
Sbjct: 304 VLSACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIRKMPIE 363
Query: 420 PDEVVWGSLLNGCKIYGRTDFAEFAVKK--LIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
PD V+W +L+ K++G D +E +K L+++D ++ G ++L N+Y GKW + K
Sbjct: 364 PDVVLWRTLIWASKVHGDIDRSEQLMKDRGLLKMDSDDCGSYVLLGNVYASAGKWHDKAK 423
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+R+++ + K PGCS IEVD VH+F + D H E+IY L+ +
Sbjct: 424 MRELMNQKGLSKPPGCSRIEVDGLVHEFAAGDSGHIEAEKIYAKLDEV 471
>gi|449440359|ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/476 (32%), Positives = 256/476 (53%), Gaps = 9/476 (1%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
K++ SF+ G F L+ F + + L AR +FD + + + AM+ Y S
Sbjct: 128 KEVHSFILRRGLEYDIFVVNALITFYS-RCDELVLARIMFDRMPERDIVSWNAMLAGY-S 185
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
Q L+R M+ + +PN VL++C + VH + +S +
Sbjct: 186 QGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMDV 245
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
+ A++ Y++ G+ + AR+LF+EM +++ +++ +MISGY G + A LF
Sbjct: 246 SLWNAVIGLYAKCGS-LDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFREQER 304
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
+P WN+VI+G QN A+ FR M S RPN VTL L H L+ G
Sbjct: 305 PRLPTWNAVISGLVQNNRQEGAVDIFRAMQ---SHGCRPNTVTLASILPVFSHFSTLKGG 361
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
K IHGY RN D + +++ A+ID Y KCG L A+ FD+ + L +W S+I+++A+H
Sbjct: 362 KEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVH 421
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
G + ++ +F EM+ + I+PD VTF S+L AC H G +++ F ++ Y I+P
Sbjct: 422 GDANVALSLFYEML---TNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPL 478
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
+EHY C+V +L RAG+ +A+E + M +EP VWG+LLNG + G + ++ +L
Sbjct: 479 VEHYACMVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLF 538
Query: 450 EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQF 505
EI+P N G +++AN+Y + G+W + +R ++K+ K PG SWIE + +F
Sbjct: 539 EIEPENTGNYVIMANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWIETSGGMQRF 594
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 142/256 (55%), Gaps = 11/256 (4%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+ +IS Y++ G I++A ++F +P +++ +WN+++ T + + +D + F + S
Sbjct: 42 SKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALLISYTLHNMHTDLLKLFSSLVNSNST 101
Query: 245 NIRPNQVTLVCALSAIG----HTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+++P++ T+ CAL A+ ++G L K +H ++ R GL+ D F+ NALI Y +C
Sbjct: 102 DVKPDRFTVTCALKALASLFSNSG---LAKEVHSFILRRGLEYDIFVVNALITFYSRCDE 158
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
L AR FDR ++ + SWN+M+ ++ G E +F M+ + ++P+ +T +S+
Sbjct: 159 LVLARIMFDRMPERDIVSWNAMLAGYSQGGSYEKCKELFRVMLSSLE--VKPNALTAVSV 216
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L AC + G + + ++ +I+ + + ++ L + G + A E+ + M +E
Sbjct: 217 LQACAQSNDLIFGIEVHRFVNES-QIKMDVSLWNAVIGLYAKCGSLDYARELFEEM-LEK 274
Query: 421 DEVVWGSLLNGCKIYG 436
D + + S+++G ++G
Sbjct: 275 DAITYCSMISGYMVHG 290
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMIN 324
++GK +H + + + D+F+ + LI Y K GS+++A F + +K + SWN+++
Sbjct: 18 FFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALLI 77
Query: 325 SFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC----THGGLVEQGRAYFKLM 380
S+ LH + + +F ++ +++PD T L A ++ GL ++ ++ ++
Sbjct: 78 SYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSGLAKEVHSF--IL 135
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+ +E I L+ R A + M E D V W ++L G
Sbjct: 136 RRG--LEYDIFVVNALITFYSRCDELVLARIMFDRMP-ERDIVSWNAMLAG 183
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 240/439 (54%), Gaps = 39/439 (8%)
Query: 67 FIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPD 126
F D P ++ AM Y S+ + A LYRDM+ +P F + LK+C D
Sbjct: 130 FQIDDEKPPEEPVWVAMAIGY-SRNGFSHEALLLYRDMLS-CCVKPGNFAFSMALKACSD 187
Query: 127 VLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
+ + + +H QIVK +D+G A ++ + A
Sbjct: 188 LDNALVGRAIHAQIVK---------------------HDVGEADQVVN----------NA 216
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
++ Y +G +F+ MP R+V +WN++IAG G + +S FR M E +
Sbjct: 217 LLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQRE---GM 273
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
+ +TL L L GK IHG + ++ + D + N+L+DMY KCG + +
Sbjct: 274 GFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPLLNSLMDMYAKCGEIGYCEK 333
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
FDR K LTSWN+M+ F+++GQ ++C+F+EM+R + I P+G+TF++LL+ C+H
Sbjct: 334 VFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIR---YGIEPNGITFVALLSGCSH 390
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GL +G+ F + + + ++P +EHY CLVD+LGR+G+F+EAL V + + + P +WG
Sbjct: 391 SGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGKFDEALSVAENIPMRPSGSIWG 450
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
SLLN C++YG AE ++L EI+PNN G +ML+NIY G W++V++VR+M+
Sbjct: 451 SLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLSNIYANAGMWEDVKRVREMMALTG 510
Query: 487 AYKTPGCSWIEVDKQVHQF 505
K GCSWI++ ++H F
Sbjct: 511 MKKDAGCSWIQIKHKIHTF 529
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 266 LQLGKVIHGYVYR--NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK--RLTSWNS 321
L+ G+ +H ++ R N + + + LI +Y CG + EARR F + +K W +
Sbjct: 86 LEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEKPPEEPVWVA 145
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
M ++ +G S ++ ++ +M+ C ++P F L AC+ GRA +
Sbjct: 146 MAIGYSRNGFSHEALLLYRDMLSCC---VKPGNFAFSMALKACSDLDNALVGRAIHAQIV 202
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
K E L+ L G F+E L+V + M + + V W +L+ G GR
Sbjct: 203 KHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMP-QRNVVSWNTLIAGFAGQGRV 258
>gi|356532565|ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Glycine max]
Length = 569
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 147/415 (35%), Positives = 239/415 (57%), Gaps = 12/415 (2%)
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
P+ + VL+ C + + H ++V GF YP + +L+++Y++ IA
Sbjct: 68 PDPTVLHRVLERCRVSTDLKTATKTHARVVVLGFATYPSLVASLISTYAQCHRP-HIALH 126
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
+F + D + S +I + G A +F M RDV WNS+I G +N F DA
Sbjct: 127 VFSRILD--LFSMNLVIESLVKGGQCDIAKKVFGKMSVRDVVTWNSMIGGYVRNLRFFDA 184
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
+S FRRM +S + P+ T ++A G L K +HG + ++L+ +S AL
Sbjct: 185 LSIFRRM---LSAKVEPDGFTFASVVTACARLGALGNAKWVHGLMVEKRVELNYILSAAL 241
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIR 351
IDMY KCG + +R+ F+ ++ ++ WN+MI+ A+HG + ++ VF M + ++
Sbjct: 242 IDMYAKCGRIDVSRQVFEEVARDHVSVWNAMISGLAIHGLAMDATLVFSRM---EMEHVL 298
Query: 352 PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALE 411
PD +TFI +L AC+H GLVE+GR YF +M + I+PQ+EHYG +VDLLGRAG EEA
Sbjct: 299 PDSITFIGILTACSHCGLVEEGRKYFGMMQNRFMIQPQLEHYGTMVDLLGRAGLMEEAYA 358
Query: 412 VVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGK 471
V+K M++EPD V+W +LL+ C+I+ + + E A+ + ++ G ++L+N+Y L
Sbjct: 359 VIKEMRMEPDIVIWRALLSACRIHRKKELGEVAIANISRLE---SGDFVLLSNMYCSLNN 415
Query: 472 WDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
WD +VR+M+K R K+ G SW+E+ +HQF++ ++HP + IY LE ++
Sbjct: 416 WDGAERVRRMMKTRGVRKSRGKSWVELGDGIHQFNAAYQSHPEMKSIYRVLEGLI 470
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 45 NFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM 104
+ ++ LV +K A+ +F ++ + + +MI Y + A S++R M
Sbjct: 133 DLFSMNLVIESLVKGGQCDIAKKVFGKMSVRDVVTWNSMIGGYV-RNLRFFDALSIFRRM 191
Query: 105 VRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN 164
+ + +P+ F + V+ +C + K VH +V+ E ++ AL++ Y++ G
Sbjct: 192 LS-AKVEPDGFTFASVVTACARLGALGNAKWVHGLMVEKRVELNYILSAALIDMYAKCGR 250
Query: 165 DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQ 224
I ++R++F+E++ +V W AMISG
Sbjct: 251 -IDVSRQVFEEVARDHVSVWNAMISGL-------------------------------AI 278
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL--- 281
+GL DA F RM ME ++ P+ +T + L+A H G+++ G+ G + +
Sbjct: 279 HGLAMDATLVFSRMEME---HVLPDSITFIGILTACSHCGLVEEGRKYFGMMQNRFMIQP 335
Query: 282 DLDSFISNALIDMYGKCGSLKEARRAF-DRNSKKRLTSWNSMINSFALHGQSE 333
L+ + ++D+ G+ G ++EA + + + W +++++ +H + E
Sbjct: 336 QLEHY--GTMVDLLGRAGLMEEAYAVIKEMRMEPDIVIWRALLSACRIHRKKE 386
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 260/474 (54%), Gaps = 27/474 (5%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMV--RR---GQPQ 111
++ ++ AR +FD + + + M++ YA + DMV RR P
Sbjct: 204 VQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRG-----------DMVEARRLFDAAPV 252
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
+ F + V+ G ++ + E+ V A+V +Y + + A++
Sbjct: 253 RDVFTWTAVVSG----YAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQR-RMMDEAKE 307
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
LF+ M RNV SW M++GY + G ++ A ++FD+MP +D +W +++A +Q G +
Sbjct: 308 LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
+ F MG + + N+ C LS L+ G +HG + R G + F+ NAL
Sbjct: 368 LQLFIEMG-RCGEWV--NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNAL 424
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIR 351
+ MY KCG++++AR AF+ ++ + SWN+MI +A HG + ++ +F+ MMR + +
Sbjct: 425 LAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFD-MMRTT--STK 481
Query: 352 PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALE 411
PD +T + +L AC+H GLVE+G +YF M + + + EHY C++DLLGRAGR EA +
Sbjct: 482 PDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHD 541
Query: 412 VVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGK 471
++K M EPD +WG+LL +I+ + A +K+ E++P N G ++L+NIY GK
Sbjct: 542 LMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGK 601
Query: 472 WDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
W + RK+R M+++R K PG SWIEV +VH F + D HP E+IY LE +
Sbjct: 602 WRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDL 655
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 185/397 (46%), Gaps = 50/397 (12%)
Query: 60 SNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPH 119
S+L AR +FD + ++ Y MI+++A+ S Y D+ P+ + +
Sbjct: 114 SSLADARGLFDEMPVRDSVTYNVMISSHANH--GLVSLARHYFDLA----PEKDAVSWNG 167
Query: 120 VLKSC---PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+L + V E+RG + S E + AL++ Y + G + AR+LFD M
Sbjct: 168 MLAAYVRNGRVEEARG-------LFNSRTEWDVISWNALMSGYVQWGK-MSEARELFDRM 219
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
R+VVSW M+SGY R GD+ A LFD+ P RDV W +V++G QNG+ +A F
Sbjct: 220 PGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFD 279
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS-NALIDMY 295
M N V+ ++A M+ K + N + + S N ++ Y
Sbjct: 280 AMPER-------NAVSWNAMVAAYIQRRMMDEAKELF-----NMMPCRNVASWNTMLTGY 327
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
+ G L+EA+ FD +K SW +M+ +++ G SE ++ +F EM RC + R
Sbjct: 328 AQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRS--- 384
Query: 356 TFISLLNACTHGGLVEQG-RAYFKLMTKTYRIEPQIEHYGCLVD--LLG---RAGRFEEA 409
F +L+ C +E G + + +L+ Y + GC V LL + G E+A
Sbjct: 385 AFACVLSTCADIAALECGMQLHGRLIRAGYGV-------GCFVGNALLAMYFKCGNMEDA 437
Query: 410 LEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
+ M+ E D V W +++ G Y R F + A++
Sbjct: 438 RNAFEEME-ERDVVSWNTMIAG---YARHGFGKEALE 470
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 143/350 (40%), Gaps = 74/350 (21%)
Query: 156 VNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAW 215
+ ++ R+G + A +LF M R+ ++ AM++GY+ G + AASLF ++P D ++
Sbjct: 45 ITAHMRAGR-VADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSY 103
Query: 216 NSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK----- 270
N+++ + +DA F M + + VT +S+ + G++ L +
Sbjct: 104 NTLLHALAVSSSLADARGLFDEMPVR-------DSVTYNVMISSHANHGLVSLARHYFDL 156
Query: 271 -----------VIHGYVYRNG------------LDLDSFISNALIDMYGKCGSLKEARRA 307
++ YV RNG + D NAL+ Y + G + EAR
Sbjct: 157 APEKDAVSWNGMLAAYV-RNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEAREL 215
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FDR + + SWN M++ +A G E R D D T+ ++++
Sbjct: 216 FDRMPGRDVVSWNIMVSGYARRGD-------MVEARRLFDAAPVRDVFTWTAVVSGYAQN 268
Query: 368 GLVEQGRAYFKLMTKT------------------------YRIEP--QIEHYGCLVDLLG 401
G++E+ R F M + + + P + + ++
Sbjct: 269 GMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYA 328
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
+AG EEA V M + D V W ++L Y + +E ++ IE+
Sbjct: 329 QAGMLEEAKAVFDTMP-QKDAVSWAAMLAA---YSQGGCSEETLQLFIEM 374
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 120/299 (40%), Gaps = 27/299 (9%)
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I+ + R G + +A LF +MP R +N+++AG + NG A S FR + R
Sbjct: 45 ITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP-------R 97
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P+ + L A+ + L + + + DS N +I + G + AR
Sbjct: 98 PDNYSYNTLLHALAVSSSLADARGL----FDEMPVRDSVTYNVMISSHANHGLVSLARHY 153
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FD +K SWN M+ ++ +G+ E + +F + D +++ +L++
Sbjct: 154 FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF-------NSRTEWDVISWNALMSGYVQW 206
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
G + + R F M + + +V R G EA + + D W +
Sbjct: 207 GKMSEARELFDRMPGR-----DVVSWNIMVSGYARRGDMVEARRLFDAAPVR-DVFTWTA 260
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+++G Y + E A + + N + Y + DE +++ M+ RN
Sbjct: 261 VVSG---YAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRN 316
>gi|345505204|gb|AEN99826.1| chlororespiratory reduction 4, partial [Aethionema cordifolium]
Length = 587
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 169/494 (34%), Positives = 259/494 (52%), Gaps = 22/494 (4%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
VL R + Q+ FL G F L+ LK L +AR IFD +
Sbjct: 105 VLKACSRLGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGL-YLKCGCLGFARQIFDRMPQR 163
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
++ Y +MI Y + SA L+ M + + L S ++
Sbjct: 164 DSVSYNSMIDGYV-KCGLIGSARELFDLMPKEMKN----------LISWNSMISGYAQTS 212
Query: 136 VHTQIVKSGFEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
I F + P + +L++ Y + G + A+ LF M R+VV+W MI GY
Sbjct: 213 DGVNIASKLFAEMPEKDLISWNSLIDGYVKHGR-MEDAKDLFYVMPRRDVVTWATMIDGY 271
Query: 192 TRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQV 251
++G + A +LFD MP RDV A+NS++AG QN +A+ F ME ++ P++
Sbjct: 272 AKLGFVHKAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFN--NMEKDSHLSPDET 329
Query: 252 TLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRN 311
TLV LSAI G L ++ Y+ L + ALIDM+ KCGS+++A F+
Sbjct: 330 TLVIVLSAIAQLGRLSKAMSMNKYIVEKSFPLGGKLGVALIDMHSKCGSIQQAISVFEGI 389
Query: 312 SKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVE 371
K + WN+MI A+HG E F+ +M+ + +I+PD +TFI +LNAC+H GLV+
Sbjct: 390 KNKSIDHWNAMIGGLAIHGHGE---LAFDMLMQIERCSIKPDDITFIGVLNACSHSGLVK 446
Query: 372 QGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNG 431
+G F+LM + ++IEP+++HYGC+VD+L R+G E A +++ M +EP++V+W + L
Sbjct: 447 EGLLSFELMRRKHKIEPRLQHYGCIVDILSRSGSIELAKHLIEDMPMEPNDVIWRTFLIA 506
Query: 432 CKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTP 491
C+ + E K LI N ++L+N+Y LG W +VR+VR M+K R +K P
Sbjct: 507 CRNRKEFEIGELVAKHLILQAGYNPSSYVLLSNMYASLGMWKDVRRVRMMMKQRKLHKIP 566
Query: 492 GCSWIEVDKQVHQF 505
GCSWIE+D VH+F
Sbjct: 567 GCSWIELDGNVHEF 580
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 185/392 (47%), Gaps = 34/392 (8%)
Query: 69 FDHLTTPNTYLYTAMITAYAS--QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPD 126
F H + +L+ A+I +++ P A F L M+ G ++F VLK+C
Sbjct: 56 FAHGEVEDPFLWNAVIKSHSHGVDPKRALIWFCL---MLENG-VSVDKFSLSLVLKACSR 111
Query: 127 VLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
+ + +H + K+G ++ L+ Y + G +G AR++FD M R+ VS+ +
Sbjct: 112 LGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGC-LGFARQIFDRMPQRDSVSYNS 170
Query: 187 MISGYTRVGDIKNAASLFDSMPD--RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
MI GY + G I +A LFD MP +++ +WNS+I+G Q SD ++ ++ E+ +
Sbjct: 171 MIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGYAQT---SDGVNIASKLFAEMPE 227
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
+ ++ + G ++ K + + R D +ID Y K G + +A
Sbjct: 228 K---DLISWNSLIDGYVKHGRMEDAKDLFYVMPRR----DVVTWATMIDGYAKLGFVHKA 280
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ FD+ + + ++NSM+ + + ++ +F M + D ++ PD T + +L+A
Sbjct: 281 KTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFNNMEK--DSHLSPDETTLVIVLSA- 337
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYG----CLVDLLGRAGRFEEALEVVKGMKIEP 420
+ + GR + Y +E G L+D+ + G ++A+ V +G+K +
Sbjct: 338 ----IAQLGRLSKAMSMNKYIVEKSFPLGGKLGVALIDMHSKCGSIQQAISVFEGIKNKS 393
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID 452
+ W +++ G I+G E A L++I+
Sbjct: 394 ID-HWNAMIGGLAIHGH---GELAFDMLMQIE 421
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 145/337 (43%), Gaps = 44/337 (13%)
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
R + +H +++K+GF Q + T +V +++ S R+ + ++
Sbjct: 4 RRCEQIHARLIKTGFIQNSNLTTRIVLAFAAS-------RRPY--------------LAE 42
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
+ R + F D WN+VI + A+ +F M + + + ++
Sbjct: 43 FARCVFQNYHSCSFAHGEVEDPFLWNAVIKSHSHGVDPKRALIWFCLM---LENGVSVDK 99
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
+L L A G +Q G IHG++ + G+ D F+ N LI +Y KCG L AR+ FDR
Sbjct: 100 FSLSLVLKACSRLGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDR 159
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
++ S+NSMI+ + G ++ +F+ M P + + N+ G
Sbjct: 160 MPQRDSVSYNSMIDGYVKCGLIGSARELFDLM---------PKEMKNLISWNSMISG--Y 208
Query: 371 EQGRAYFKLMTKTYRIEPQIE--HYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
Q + +K + P+ + + L+D + GR E+A ++ M D V W ++
Sbjct: 209 AQTSDGVNIASKLFAEMPEKDLISWNSLIDGYVKHGRMEDAKDLFYVMP-RRDVVTWATM 267
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNG--GYGIMLA 463
++G Y + F A K L + P+ Y M+A
Sbjct: 268 IDG---YAKLGFVHKA-KTLFDQMPHRDVVAYNSMMA 300
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 171/544 (31%), Positives = 278/544 (51%), Gaps = 83/544 (15%)
Query: 58 KLSNLTYARFIF-DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
K + + +A IF D N + + A+I+ + + F Y+ M G P++F
Sbjct: 84 KCNQMNFALSIFSDPTHEINVFAFNAIISGFITN-GFPEEGFEFYQKMRNEGV-IPDKFT 141
Query: 117 YPHVLKSCPDVLESR-----------------GTKMVHTQI-------VKSGFEQYP--- 149
+P +K+C DVLE + G+ +V+ + + FE+ P
Sbjct: 142 FPCAIKACLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRD 201
Query: 150 -VVETALVNSYSRSGNDIGIARKLFDEMSDRNVV----SWTAMISGYTRVGDIKN----- 199
V+ A+VN Y++ G + + F M+D +VV + T ++S + +GD+ N
Sbjct: 202 VVLWNAMVNGYAQIGQ-FEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIH 260
Query: 200 ------------------------------AASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
A +F+ M ++D+ +WNS+++ Q G
Sbjct: 261 GFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHD 320
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL-----DLD 284
+ RM + I+P+ VT+ L A H L G+ IHGY+ +GL D+D
Sbjct: 321 GTLRLLDRM---LGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDID 377
Query: 285 S-FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
+ NA+IDMY KCGS+++A F+R S K + SWN MI + +HG ++ +F M
Sbjct: 378 DVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMC 437
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
Q ++PD VTF+ +L+AC+H G V QGR + M Y + P IEHY C++D+LGRA
Sbjct: 438 EVQ---LKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRA 494
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLA 463
G+ +EA E+ M IE + VVW +LL C+++ AE A +++ E++P + G ++++
Sbjct: 495 GQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMS 554
Query: 464 NIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
N+YG +G+++EV +VR ++ +N KTPGCSWIE+ VH F S D+ HP IY L
Sbjct: 555 NVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLN 614
Query: 524 SMVA 527
S+ A
Sbjct: 615 SLTA 618
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 182 VSWTAMISGYTRVGDIKNAASLF-DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
+S T++I+ Y++ + A S+F D + +V A+N++I+G NG + F+++M
Sbjct: 73 LSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMR- 131
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
++ + P++ T CA+ A +L++ K IHG +++ GL+LD FI +AL++ Y K G
Sbjct: 132 --NEGVIPDKFTFPCAIKAC--LDVLEIKK-IHGLLFKFGLELDVFIGSALVNCYLKFGL 186
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
++ A+ AF+ + + WN+M+N +A GQ E V E R D ++ P T +
Sbjct: 187 MEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM---VLETFRRMNDESVVPSRFTVTGV 243
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+ G + GR K + + L+D+ G+ E+ALE+ + M+ E
Sbjct: 244 LSVFAVMGDLNNGRIIHGFAMKM-GYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR-EK 301
Query: 421 DEVVWGSLLN 430
D W S+++
Sbjct: 302 DIFSWNSIVS 311
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 119/277 (42%), Gaps = 45/277 (16%)
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
N T + +L A H L GK IH Y+ NG +LI+MY KC + A F
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIF 95
Query: 309 -DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
D + + ++N++I+ F +G E FE + ++ + PD TF + AC
Sbjct: 96 SDPTHEINVFAFNAIISGFITNGFPEEG---FEFYQKMRNEGVIPDKFTFPCAIKACLD- 151
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
V + + L+ K + +E + LV+ + G E A + + I D V+W +
Sbjct: 152 --VLEIKKIHGLLFK-FGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIR-DVVLWNA 207
Query: 428 LLNGCKIYGRTDF---------------AEFAVKKLIEI-----DPNNG----------G 457
++NG G+ + + F V ++ + D NNG G
Sbjct: 208 MVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMG 267
Query: 458 Y--GIMLAN----IYGELGKWDEVRKVRKMLKDRNAY 488
Y G+ ++N +YG+ ++ ++ +M+++++ +
Sbjct: 268 YDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIF 304
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 154/469 (32%), Positives = 253/469 (53%), Gaps = 40/469 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K L A IFD + + + A+I A+ Q H +L+ M+R +P+ + +
Sbjct: 419 KCGALMEACLIFDDMEIKDAVSWNAIIAAH-EQNEHVEETLALFVSMLRSTM-EPDDYTF 476
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
V+K+C VH +++KSG G D +
Sbjct: 477 GSVVKACAGKKALNYGMEVHGRVIKSGM-----------------GLDWFVG-------- 511
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
+A+I Y + G + A + + + +R +WNS+I+G + +A+S+F R
Sbjct: 512 -------SAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSR 564
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M + + P+ T L + ++LGK IHG + + L D +I++ ++DMY K
Sbjct: 565 M---LQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSK 621
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG+++++R F++ K+ +W++MI ++A HG E++I +FEEM Q N++P+ F
Sbjct: 622 CGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEM---QLQNVKPNHTIF 678
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
IS+L AC H G V++G YF+ M Y ++PQ+EHY C+VDLLGR+G+ EALE+++ M
Sbjct: 679 ISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMP 738
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
E D+V+W +LL C++ G + AE A L+++DP + ++L+N+Y G W EV K
Sbjct: 739 FEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAK 798
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+R +K+ K PGCSWI+V +VH F DK HPR+EEIY +V
Sbjct: 799 IRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLV 847
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 175/417 (41%), Gaps = 49/417 (11%)
Query: 43 QTNFYAFKLVRFCTL----KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAF 98
+TNF +V TL K + AR +F+ P + A+I YA Q A
Sbjct: 299 KTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQD-QVLEAL 357
Query: 99 SLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNS 158
++R + ++ ++ L +C + +H VK G
Sbjct: 358 EIFRSL-QKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGL------------- 403
Query: 159 YSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSV 218
D N+ ++ Y + G + A +FD M +D +WN++
Sbjct: 404 -------------------DFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAI 444
Query: 219 IAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR 278
IA QN + ++ F M + + P+ T + A L G +HG V +
Sbjct: 445 IAAHEQNEHVEETLALFVSM---LRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIK 501
Query: 279 NGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICV 338
+G+ LD F+ +A+IDMY KCG L EA + +R ++ SWNS+I+ F+ Q EN++
Sbjct: 502 SGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSY 561
Query: 339 FEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVD 398
F M++ + PD T+ ++L+ C + VE G+ + K ++ + +VD
Sbjct: 562 FSRMLQV---GVIPDNFTYATVLDICANLATVELGKQIHGQILKL-QLHSDVYIASTIVD 617
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNN 455
+ + G +++ ++ + D V W +++ +G E A+K E+ N
Sbjct: 618 MYSKCGNMQDS-RIMFEKAPKRDYVTWSAMICAYAYHG---LGEDAIKLFEEMQLQN 670
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 124/280 (44%), Gaps = 8/280 (2%)
Query: 105 VRRGQPQPNQ-FIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSG 163
+ Q P + + H+ + C ++ K H QI +GF V L+ Y +
Sbjct: 28 ISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCL 87
Query: 164 NDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCT 223
N + A +FD+M R+V+SW MI GY VG+++ A LFDSMP+RDV +WNS+++
Sbjct: 88 N-LNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYL 146
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL 283
QNG +I F +M + I+ + T L A LG +H + G D
Sbjct: 147 QNGFHRKSIEIFTKMRLL---EIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDS 203
Query: 284 DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
D AL+DMY C L A F ++ W+++I + + + + +++ M+
Sbjct: 204 DVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVML 263
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT 383
D + TF S +C E G KT
Sbjct: 264 ---DEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKT 300
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 187/435 (42%), Gaps = 29/435 (6%)
Query: 5 TNQLNQTLNQQVLAILERCNH---INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN 61
+NQ+N T I ++C++ IN KQ + +T G T F + L++F K N
Sbjct: 30 SNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQF-YCKCLN 88
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L YA +FD + + + MI YA + F L+ M R N + ++
Sbjct: 89 LNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQF-LFDSMPERDVVSWNSMLSCYLQ 147
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK---LFDEMS- 177
TKM +I Q+ A+V D G+ + L +M
Sbjct: 148 NGFHRKSIEIFTKMRLLEI------QHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGF 201
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
D +VV+ TA++ Y+ + +A ++F MP+R+ W++VIAG +N F++ + ++
Sbjct: 202 DSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKV 261
Query: 238 M---GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
M GM VS Q T A + +LG +H Y + D+ + A +DM
Sbjct: 262 MLDEGMGVS------QATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDM 315
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KC + +AR+ F+ S N++I +A Q ++ +F + Q + D
Sbjct: 316 YAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSL---QKSYLDFDE 372
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
++ L AC+ +G L K ++ I ++D+ + G EA +
Sbjct: 373 ISLSGALTACSAIKGYLEGIQLHGLAVKC-GLDFNICVANTILDMYAKCGALMEACLIFD 431
Query: 415 GMKIEPDEVVWGSLL 429
M+I+ D V W +++
Sbjct: 432 DMEIK-DAVSWNAII 445
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 174/421 (41%), Gaps = 58/421 (13%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L +A IF + N+ ++A+I Y + LY+ M+ G +Q +
Sbjct: 221 LDHAFNIFCEMPERNSVCWSAVIAGYVRND-RFTEGLKLYKVMLDEGMG-VSQATFASAF 278
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+SC + +H +K+ F +V TA ++ Y++ D M D
Sbjct: 279 RSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKC-----------DRMVD--- 324
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
A +F++ P+ + N++I G + +A+ FR +
Sbjct: 325 ------------------ARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKS 366
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
D ++++L AL+A G +HG + GLD + ++N ++DMY KCG+L
Sbjct: 367 YLDF---DEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGAL 423
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
EA FD K SWN++I + + E ++ +F M+R + PD TF S++
Sbjct: 424 MEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLR---STMEPDDYTFGSVV 480
Query: 362 NACT-----HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
AC + G+ GR M + + I C +L A + E LE
Sbjct: 481 KACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLE----- 535
Query: 417 KIEPDEVVWGSLLNG--CKIYGRTDFAEFAVKKLIEIDPNNGGYGIML---ANIYG-ELG 470
E V W S+++G + G + F+ + + P+N Y +L AN+ ELG
Sbjct: 536 --ERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELG 593
Query: 471 K 471
K
Sbjct: 594 K 594
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 163/471 (34%), Positives = 253/471 (53%), Gaps = 17/471 (3%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
+L AR +F+ + + AMI+ Y A +L R M G Q + Y +
Sbjct: 238 DLNGAREVFEAMVENLGAAWNAMISGYVHCGCF-QEALTLCRKMRFLG-IQFDDITYTTI 295
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYP------VVETALVNSYSRSGNDIGIARKLFD 174
+ +C +V + K VH I+K+ E P V AL+ Y ++ N + ARK+F
Sbjct: 296 ISACANVGSFQMGKQVHAYILKN--ELNPNHSFCLSVSNALITLYCKN-NKVDEARKIFY 352
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
M RN+++W A++SGY G ++ A S F+ MP +++ +I+G QNG + +
Sbjct: 353 AMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKL 412
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
F++M + D P AL+A G L+ G+ +H + G + + NA+I M
Sbjct: 413 FKQMRL---DGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISM 469
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KCG ++ A F L SWNSMI + HG +I +F++M++ + PD
Sbjct: 470 YAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLK---EGVFPDR 526
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
+TF+++L AC+H GLVE+GR YF M ++Y I P +HY +VDL RAG F A V+
Sbjct: 527 ITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVID 586
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M +P VW +LL GC+I+G D A ++L ++ P N G ++L+NIY ++G+W+E
Sbjct: 587 SMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNE 646
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
V KVRK+++D+ K P CSWIEV+ +VH F D HP +Y LE +
Sbjct: 647 VAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQL 697
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 195/424 (45%), Gaps = 56/424 (13%)
Query: 59 LSNLTYARFIFDH--LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
L NL R IF+ L ++ Y AMIT YA SA L+R M RR +P+ F
Sbjct: 92 LGNLELGREIFNGTPLYMRDSVFYNAMITGYAHN-GDGHSALELFRAM-RRDDFRPDDFT 149
Query: 117 YPHVLKSCP-DVLESRGTKMVHTQIVKSGFEQYPV-VETALVNSYSRSGNDIGI------ 168
+ VL + V + +H +VK+G V AL++ Y + +++GI
Sbjct: 150 FTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMV 209
Query: 169 -ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGL 227
ARKLFDEM R+ ++WT MI+GY R D+ A +F++M + AWN++I+G G
Sbjct: 210 SARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGC 269
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD-SF 286
F +A++ R+M I+ + +T +SA + G Q+GK +H Y+ +N L+ + SF
Sbjct: 270 FQEALTLCRKMRFL---GIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSF 326
Query: 287 ---ISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM- 342
+SNALI +Y K + EAR+ F + + +WN++++ + G+ E + FEEM
Sbjct: 327 CLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMP 386
Query: 343 -----------------------------MRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
MR P F L AC+ G +E G
Sbjct: 387 VKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLD--GFEPCDFAFAGALTACSVLGALENG 444
Query: 374 RA-YFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
R + +L+ Y E + ++ + + G E A V M D V W S++
Sbjct: 445 RQLHAQLVHLGY--ESSLSVGNAMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAAL 501
Query: 433 KIYG 436
+G
Sbjct: 502 GQHG 505
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 165/370 (44%), Gaps = 59/370 (15%)
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+ VH ++ SGF+ L+ Y +S N + AR+LF+E+ + + ++ T +I+ Y
Sbjct: 32 ARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLV-YARQLFEEIPNPDAIARTTLITAYC 90
Query: 193 RVGDIKNAASLFDSMP--DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
+G+++ +F+ P RD +N++I G NG A+ FR M D+ RP+
Sbjct: 91 ALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMR---RDDFRPDD 147
Query: 251 VTLVCALSA-IGHTGMLQLGKVIHGYVYRNGLD-LDSFISNALIDMYGK--------CGS 300
T LSA + G Q +H V + G+ + S + NAL+ +Y K C +
Sbjct: 148 FTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSA 207
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFA----LHGQSE-------------NSI------- 336
+ AR+ FD K+ +W +MI + L+G E N++
Sbjct: 208 MVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHC 267
Query: 337 -CVFEEMMRCQDH---NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEH 392
C E + C+ I+ D +T+ ++++AC + G + G+ + K E H
Sbjct: 268 GCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKN---ELNPNH 324
Query: 393 YGC------LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTD-----FA 441
C L+ L + + +EA ++ M + + + W ++L+G GR + F
Sbjct: 325 SFCLSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNAILSGYVNAGRMEEAKSFFE 383
Query: 442 EFAVKKLIEI 451
E VK L+ +
Sbjct: 384 EMPVKNLLTL 393
>gi|195651407|gb|ACG45171.1| CRR4 [Zea mays]
Length = 601
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 159/462 (34%), Positives = 253/462 (54%), Gaps = 42/462 (9%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + + + +MI YA A +L+ M+R G PN V C
Sbjct: 163 ARRLFDSMPRKTSASWNSMIACYA-HGGEFQEALTLFDQMLREGA-SPNAITITTVFSIC 220
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+T + + R A+ E +NV+
Sbjct: 221 --------------------------AKTGDLETGRR-------AKAWVSEEDLQNVIVH 247
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
TA++ Y + I A FD MP RDV AW+++IAG + NG +++ F RM +
Sbjct: 248 TALMEMYVKCRAIDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFERMK---AT 304
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
N +PN+VTLV LSA G +LG+ I Y+ L L S++ +ALIDMY KCG + A
Sbjct: 305 NCKPNEVTLVGVLSACAQLGSDELGEQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARA 364
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R F R +K + +WNSMI AL+G +E++I ++ EM+ ++P+ +TF++LL AC
Sbjct: 365 RDVFHRMEQKVVIAWNSMIRGLALNGFAEDAIALYGEMV---GDGVQPNEITFLALLTAC 421
Query: 365 THGGLVEQGRAYFKLMTKTYR-IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
TH GLV++G A+F+ M K + PQ+EH C+VDLL ++GR EA + + M++EP+ V
Sbjct: 422 THAGLVDKGMAFFQEMKKNKQHASPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAV 481
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+W +LL+ C+ + + A+ A KL+ ++PN+ ++L+NIY + G W +VR++R +++
Sbjct: 482 IWTTLLSACRAHADVELAKLAAGKLVVLEPNSSSIYVLLSNIYADAGLWGDVREIRDLMR 541
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+N K SWIE+D +VH+F D HPR+ EIY+ ++ +
Sbjct: 542 SKNLQKLSAYSWIELDGEVHRFLVQDTYHPRSAEIYNVVDGL 583
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 196/392 (50%), Gaps = 37/392 (9%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMV-------RRGQPQPNQFIY 117
AR +FD + P L A ++ S SL+++++ RRG P+ I
Sbjct: 31 ARHLFDAVPRPTAALCCAFVSVL--------SKLSLHQELIEAVSSLHRRGGAIPSGCI- 81
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
P VLKSC S H + G V+TALV+ Y+++GN + A F+EM
Sbjct: 82 PLVLKSCALSAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGN-MDSAVMAFEEMP 140
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
++ + +I GY+R GD++ A LFDSMP + +WNS+IA G F +A++ F +
Sbjct: 141 IKDPIPMNCLIIGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQ 200
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M + + PN +T+ S TG L+ G+ +V L + + AL++MY K
Sbjct: 201 M---LREGASPNAITITTVFSICAKTGDLETGRRAKAWVSEEDLQ-NVIVHTALMEMYVK 256
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
C ++ EARR FDR ++ + +W++MI ++ +G+ S+ +FE M + N +P+ VT
Sbjct: 257 CRAIDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFERM---KATNCKPNEVTL 313
Query: 358 ISLLNACTHGG---LVEQGRAYFKLMTKTYRIEPQIEHYG-CLVDLLGRAGRFEEALEVV 413
+ +L+AC G L EQ +Y + T P + G L+D+ + G A +V
Sbjct: 314 VGVLSACAQLGSDELGEQIGSYIESQTL-----PLTSYLGSALIDMYTKCGHVARARDVF 368
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
M+ + + W S++ G + G FAE A+
Sbjct: 369 HRME-QKVVIAWNSMIRGLALNG---FAEDAI 396
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 251/470 (53%), Gaps = 46/470 (9%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQ--PAHASSAFSLYRDMVRRGQPQPNQFIYP 118
+++YAR +FD + P +L+ ++ Y P A S + R + R P+ F +P
Sbjct: 84 DMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVR----PDPFTFP 139
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
V+K+C ++ E +H +VK G E V T L
Sbjct: 140 FVIKACAELAELWAGLGMHGHVVKHGLEFVAAVRTEL----------------------- 176
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
MI Y + G++ A LF SM +RD+ AWN++IA C Q G S A+ FR M
Sbjct: 177 --------MIM-YVKFGELGCAEFLFGSMVERDLVAWNALIAVCVQTGFSSKALQSFREM 227
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
GM I+P+ VT+V ALSA GH G L+ G+ I+ + G+D + + NA +DM KC
Sbjct: 228 GMA---GIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGIDSNIIVHNARLDMCAKC 284
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G + +A FD ++ + SW+++I +A++G+SE ++ +F M ++ ++P+ VTF+
Sbjct: 285 GDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSRM---KNQGVQPNYVTFL 341
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKT--YRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
++L+AC+H G V +G YF M ++ I+P+ EHY C+VDLLGR+G EEA +K M
Sbjct: 342 AVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIM 401
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
IE D +WG+LL C I+ + L E+ P Y ++L+N+Y G+W V
Sbjct: 402 PIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIASYHVLLSNMYAAAGRWHCVE 461
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
KVR+ +K + A K S +E + ++H + DK+HP++ I LE ++
Sbjct: 462 KVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSASILAKLEDLL 511
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 124/262 (47%), Gaps = 10/262 (3%)
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
GD+ A LFD M WN+++ G +NG+ A+S + +M +RP+ T
Sbjct: 83 GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMR---HLGVRPDPFTFP 139
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
+ A L G +HG+V ++GL+ + + L+ MY K G L A F ++
Sbjct: 140 FVIKACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVER 199
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
L +WN++I G S ++ F EM I+PD VT +S L+AC H G +E G
Sbjct: 200 DLVAWNALIAVCVQTGFSSKALQSFREMGMA---GIKPDSVTIVSALSACGHLGCLETGE 256
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
++ + I+ I + +D+ + G ++A+ + M + + + W +++ G +
Sbjct: 257 EIYEF-AREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMP-QRNVISWSTVIGGYAV 314
Query: 435 YGRTD--FAEFAVKKLIEIDPN 454
G ++ A F+ K + PN
Sbjct: 315 NGESEKALALFSRMKNQGVQPN 336
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 7/215 (3%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K L A F+F + + + A+I A Q +S A +R+M G +P+
Sbjct: 181 VKFGELGCAEFLFGSMVERDLVAWNALI-AVCVQTGFSSKALQSFREMGMAG-IKPDSVT 238
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
L +C + + ++ + G + +V A ++ ++ G D+ A LFDEM
Sbjct: 239 IVSALSACGHLGCLETGEEIYEFAREEGIDSNIIVHNARLDMCAKCG-DMDKAMNLFDEM 297
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVP----AWNSVIAGCTQNGLFSDAI 232
RNV+SW+ +I GY G+ + A +LF M ++ V + +V++ C+ G ++
Sbjct: 298 PQRNVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGW 357
Query: 233 SFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
+F M NI+P + C + +G +G L+
Sbjct: 358 QYFNFMAQSDDKNIQPRKEHYACMVDLLGRSGHLE 392
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 162/471 (34%), Positives = 257/471 (54%), Gaps = 44/471 (9%)
Query: 58 KLSNLTYARFIFDH--LTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQF 115
K S + AR +FD + T Y ++++ YA + L+ +M G + N
Sbjct: 57 KCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALN-SRVKDVVVLFCEMRELGV-EINGV 114
Query: 116 IYPHVLKSCPDVLESRGTKM-VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
+++ C + + G M VH VK G + V L+ Y +SG +I RKLFD
Sbjct: 115 TMLGLVQPC-GIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSG-EIDCGRKLFD 172
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
EM + +++W AMI+GY QNGL ++ +
Sbjct: 173 EMPRKGLITWNAMINGY-------------------------------AQNGLANNVLEL 201
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
++ M S P+ +TLV LS+ H G L +GK + + G + F++NAL++M
Sbjct: 202 YKEM---ESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNM 258
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y +CG+LK+AR FD K + SW ++I + +HGQ E ++ +F+EM+R I+PDG
Sbjct: 259 YARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIR---GGIKPDG 315
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
F+S+L+AC+H GL +G YF +M + Y + P EHY C+VDLLGRAGR EA E+++
Sbjct: 316 TAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIE 375
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M++ D +WG+LL CKI+ + AE A +++IE++P N GY ++L+N+Y E G +
Sbjct: 376 SMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEG 435
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
+ +VR +++ R K PGCS++E +VH F + D+ HP+T EIY L +
Sbjct: 436 ILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIYKKLNEL 486
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 169/349 (48%), Gaps = 61/349 (17%)
Query: 104 MVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSG 163
M+R G PN F +P +KSC + K +H + K+G P V+T+L++ Y +
Sbjct: 1 MLRSG-ASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKC- 58
Query: 164 NDIGIARKLFDE--MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAG 221
+ I ARKLFDE S + V + +++SGY +K+ LF M
Sbjct: 59 SLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEM-------------- 104
Query: 222 CTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGL 281
R +G+E+ N VT++ + G G L LG +HG+ + GL
Sbjct: 105 --------------RELGVEI------NGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGL 144
Query: 282 DLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEE 341
D+DS + N L+ MY K G + R+ FD +K L +WN+MIN +A +G + N + +++E
Sbjct: 145 DMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKE 204
Query: 342 MMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYG------- 394
M + PD +T + +L++C H G + G+ +E ++E +G
Sbjct: 205 M---ESKGFCPDPLTLVGVLSSCAHLGALSVGK----------EVERKMEGFGFSSNPFL 251
Query: 395 --CLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
LV++ R G ++A ++ GM ++ V W +++ G ++G+ + A
Sbjct: 252 NNALVNMYARCGNLKKARDIFDGMPVK-SVVSWTAIIGGYGMHGQGEVA 299
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 102/216 (47%), Gaps = 11/216 (5%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRG-QPQPNQF 115
+K + R +FD + + AMI YA Q A++ LY++M +G P P
Sbjct: 159 VKSGEIDCGRKLFDEMPRKGLITWNAMINGYA-QNGLANNVLELYKEMESKGFCPDPLTL 217
Query: 116 IYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
+ VL SC + K V ++ GF P + ALVN Y+R GN + AR +FD
Sbjct: 218 V--GVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGN-LKKARDIFDG 274
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSM----PDRDVPAWNSVIAGCTQNGLFSDA 231
M ++VVSWTA+I GY G + A LFD M D A+ SV++ C+ GL +
Sbjct: 275 MPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKG 334
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
+ +F ME +RP C + +G G L
Sbjct: 335 LDYFGV--MERKYGLRPGAEHYSCMVDLLGRAGRLN 368
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 40/212 (18%)
Query: 16 VLAILERCNHINHL---KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
++ +L C H+ L K+++ + G S F LV + NL AR IFD +
Sbjct: 217 LVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNM-YARCGNLKKARDIFDGM 275
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
+ +TA+I Y A L+ +M+ RG +P+ + VL +C
Sbjct: 276 PVKSVVSWTAIIGGYGMH-GQGEVAVGLFDEMI-RGGIKPDGTAFVSVLSACS------- 326
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYS-RSGNDIGIARKLFDEMSDRNVVSWTAMISGY 191
H + G + + V+E Y R G + ++ M+
Sbjct: 327 ----HAGLTNKGLDYFGVME----RKYGLRPGAE-----------------HYSCMVDLL 361
Query: 192 TRVGDIKNAASLFDSMPDR-DVPAWNSVIAGC 222
R G + A L +SM R D W +++ C
Sbjct: 362 GRAGRLNEARELIESMQVRADGALWGALLGAC 393
>gi|356498922|ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 682
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 158/462 (34%), Positives = 263/462 (56%), Gaps = 14/462 (3%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
K+ +G+S+ N + + K+ NL AR FD + + AM++ YA
Sbjct: 182 KEATRLFCMMGESEKNVITWTTMVTGHAKMRNLETARMYFDEMPERRVASWNAMLSGYA- 240
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
Q A L+ DM+ G +P++ + VL SC + + + + ++ + F
Sbjct: 241 QSGAAQETVRLFDDMLSSGN-EPDETTWVTVLSSCSSLGDPCLAESIVRKLDRMNFRSNY 299
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSD-RNVVSWTAMISGYTRVGDIKNAASLFDSMP 208
V+TAL++ +++ GN + +A+K+F+++ +N V+W AMIS Y RVGD+ A LF+ MP
Sbjct: 300 FVKTALLDMHAKCGN-LEVAQKIFEQLGVYKNSVTWNAMISAYARVGDLSLARDLFNKMP 358
Query: 209 DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQL 268
+R+ +WNS+IAG QNG AI F+ M S + +P++VT+V SA GH G L L
Sbjct: 359 ERNTVSWNSMIAGYAQNGESLKAIQLFKEM--ISSKDSKPDEVTMVSVFSACGHLGRLGL 416
Query: 269 GKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFAL 328
G ++ N + L N+LI MY +CGS+++AR F + K L S+N++I+ A
Sbjct: 417 GNWAVSILHENHIKLSISGYNSLIFMYLRCGSMEDARITFQEMATKDLVSYNTLISGLAA 476
Query: 329 HGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEP 388
HG SI + +M ++ I PD +T+I +L AC+H GL+E+G F+ + P
Sbjct: 477 HGHGTESIKLMSKM---KEDGIGPDRITYIGVLTACSHAGLLEEGWKVFESIKV-----P 528
Query: 389 QIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL 448
++HY C++D+LGR G+ EEA+++++ M +EP ++GSLLN I+ + + E A KL
Sbjct: 529 DVDHYACMIDMLGRVGKLEEAVKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKL 588
Query: 449 IEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
+++P+N G ++L+NIY G+W +V KVR ++ + KT
Sbjct: 589 FKVEPHNSGNYVLLSNIYALAGRWKDVDKVRDKMRKQGVKKT 630
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 223/483 (46%), Gaps = 78/483 (16%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTY 78
I + +++HL+QL + L Q N + L+ CT L+ Y IF T PN +
Sbjct: 9 IASKITNLHHLRQLHAQLVLHSQHHHNHWVALLLTQCTHLLAPSNYTSHIFRAATYPNVH 68
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHT 138
++T M+ Y+ A SL++ M +P YP ++KS + ++H
Sbjct: 69 VFTCMLKYYSQIGATTQVVVSLFKHMQYYNDIKPYTSFYPVLIKSA-----GKAGMLLHA 123
Query: 139 QIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR------------------- 179
++K G V A++ Y++ G I +ARKLFDEM DR
Sbjct: 124 YLLKLGHSHDHHVRNAIMGIYAKYGC-IELARKLFDEMPDRTAADWNVIISGYWKCGNEK 182
Query: 180 --------------NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQN 225
NV++WT M++G+ ++ +++ A FD MP+R V +WN++++G Q+
Sbjct: 183 EATRLFCMMGESEKNVITWTTMVTGHAKMRNLETARMYFDEMPERRVASWNAMLSGYAQS 242
Query: 226 GLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
G + + F M +S P++ T V LS+ G L + I + R +
Sbjct: 243 GAAQETVRLFDDM---LSSGNEPDETTWVTVLSSCSSLGDPCLAESIVRKLDRMNFRSNY 299
Query: 286 FISNALIDMYGKCGSLKEARRAFD-----RNS---------------------------K 313
F+ AL+DM+ KCG+L+ A++ F+ +NS +
Sbjct: 300 FVKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAYARVGDLSLARDLFNKMPE 359
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
+ SWNSMI +A +G+S +I +F+EM+ +D +PD VT +S+ +AC H G + G
Sbjct: 360 RNTVSWNSMIAGYAQNGESLKAIQLFKEMISSKDS--KPDEVTMVSVFSACGHLGRLGLG 417
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
++ + + I+ I Y L+ + R G E+A + M + D V + +L++G
Sbjct: 418 NWAVSILHENH-IKLSISGYNSLIFMYLRCGSMEDARITFQEMATK-DLVSYNTLISGLA 475
Query: 434 IYG 436
+G
Sbjct: 476 AHG 478
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 260/474 (54%), Gaps = 27/474 (5%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMV--RR---GQPQ 111
++ ++ AR +FD + + + M++ YA + DMV RR P
Sbjct: 204 VQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRG-----------DMVEARRLFDAAPV 252
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
+ F + V+ G ++ + E+ V A+V +Y + + A++
Sbjct: 253 RDVFTWTAVVSG----YAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQR-RMMDEAKE 307
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
LF+ M RNV SW M++GY + G ++ A ++FD+MP +D +W +++A +Q G +
Sbjct: 308 LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
+ F MG + + N+ C LS L+ G +HG + R G + F+ NAL
Sbjct: 368 LQLFIEMG-RCGEWV--NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNAL 424
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIR 351
+ MY KCG++++AR AF+ ++ + SWN+MI +A HG + ++ +F+ MMR + +
Sbjct: 425 LAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFD-MMRTT--STK 481
Query: 352 PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALE 411
PD +T + +L AC+H GLVE+G +YF M + + + EHY C++DLLGRAGR EA +
Sbjct: 482 PDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHD 541
Query: 412 VVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGK 471
++K M EPD +WG+LL +I+ + A +K+ E++P N G ++L+NIY GK
Sbjct: 542 LMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGK 601
Query: 472 WDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
W + RK+R M+++R K PG SWIEV +VH F + D HP E+IY LE +
Sbjct: 602 WRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDL 655
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 185/397 (46%), Gaps = 50/397 (12%)
Query: 60 SNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPH 119
S+L AR +FD + ++ Y MI+++A+ S Y D+ P+ + +
Sbjct: 114 SSLADARGLFDEMPVRDSVTYNVMISSHANH--GLVSLARHYFDLA----PEKDAVSWNG 167
Query: 120 VLKSC---PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+L + V E+RG + S E + AL++ Y + G + AR+LFD M
Sbjct: 168 MLAAYVRNGRVEEARG-------LFNSRTEWDAISWNALMSGYVQWGK-MSEARELFDRM 219
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
R+VVSW M+SGY R GD+ A LFD+ P RDV W +V++G QNG+ +A F
Sbjct: 220 PGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFD 279
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS-NALIDMY 295
M N V+ ++A M+ K + N + + S N ++ Y
Sbjct: 280 AMPER-------NAVSWNAMVAAYIQRRMMDEAKELF-----NMMPCRNVASWNTMLTGY 327
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
+ G L+EA+ FD +K SW +M+ +++ G SE ++ +F EM RC + R
Sbjct: 328 AQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRS--- 384
Query: 356 TFISLLNACTHGGLVEQG-RAYFKLMTKTYRIEPQIEHYGCLVD--LLG---RAGRFEEA 409
F +L+ C +E G + + +L+ Y + GC V LL + G E+A
Sbjct: 385 AFACVLSTCADIAALECGMQLHGRLIRAGYGV-------GCFVGNALLAMYFKCGNMEDA 437
Query: 410 LEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
+ M+ E D V W +++ G Y R F + A++
Sbjct: 438 RNAFEEME-ERDVVSWNTMIAG---YARHGFGKEALE 470
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 144/350 (41%), Gaps = 74/350 (21%)
Query: 156 VNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAW 215
+ ++ R+G + A +LF M R+ ++ AM++GY+ G + AASLF ++P D ++
Sbjct: 45 ITAHMRAGR-VADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSY 103
Query: 216 NSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK----- 270
N+++ + +DA F M + + VT +S+ + G++ L +
Sbjct: 104 NTLLHALAVSSSLADARGLFDEMPVR-------DSVTYNVMISSHANHGLVSLARHYFDL 156
Query: 271 -----------VIHGYVYRNG------------LDLDSFISNALIDMYGKCGSLKEARRA 307
++ YV RNG + D+ NAL+ Y + G + EAR
Sbjct: 157 APEKDAVSWNGMLAAYV-RNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEAREL 215
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FDR + + SWN M++ +A G E R D D T+ ++++
Sbjct: 216 FDRMPGRDVVSWNIMVSGYARRGD-------MVEARRLFDAAPVRDVFTWTAVVSGYAQN 268
Query: 368 GLVEQGRAYFKLMTKT------------------------YRIEP--QIEHYGCLVDLLG 401
G++E+ R F M + + + P + + ++
Sbjct: 269 GMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYA 328
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
+AG EEA V M + D V W ++L Y + +E ++ IE+
Sbjct: 329 QAGMLEEAKAVFDTMP-QKDAVSWAAMLAA---YSQGGCSEETLQLFIEM 374
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 120/299 (40%), Gaps = 27/299 (9%)
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I+ + R G + +A LF +MP R +N+++AG + NG A S FR + R
Sbjct: 45 ITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP-------R 97
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P+ + L A+ + L + + + DS N +I + G + AR
Sbjct: 98 PDNYSYNTLLHALAVSSSLADARGL----FDEMPVRDSVTYNVMISSHANHGLVSLARHY 153
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FD +K SWN M+ ++ +G+ E + +F + D +++ +L++
Sbjct: 154 FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF-------NSRTEWDAISWNALMSGYVQW 206
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
G + + R F M + + +V R G EA + + D W +
Sbjct: 207 GKMSEARELFDRMPGR-----DVVSWNIMVSGYARRGDMVEARRLFDAAPVR-DVFTWTA 260
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+++G Y + E A + + N + Y + DE +++ M+ RN
Sbjct: 261 VVSG---YAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRN 316
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 162/469 (34%), Positives = 262/469 (55%), Gaps = 10/469 (2%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K+ L+ AR + + +T++I AY S+ A A +++M+ G P+
Sbjct: 186 KMGMLSDARLLLAQAPVRDVISWTSLIAAY-SRADRAKEAVDCFKNMLSEGI-APDDVTV 243
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
VL +C + + +H+ + + G + AL++ Y++ G D G AR++FD +
Sbjct: 244 IGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCG-DFGHAREVFDAVG 302
Query: 178 -DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
R SW A+I GY + G + A SLFD M RD+ +NS+I G +G +A+ F
Sbjct: 303 RGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLF- 361
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
M M D +R + T+V LSA G L G+ +H + ++ D +I AL+DMY
Sbjct: 362 -MNMRRHD-LRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYM 419
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCG + EA F R K+ + +W +MI A +G + + F +M RC +P+ V+
Sbjct: 420 KCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQM-RCD--GFQPNPVS 476
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+I++L AC+H L+ +GR YF M Y I PQIEHYGC++DLLGR+G +EA+++VK M
Sbjct: 477 YIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTM 536
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
++P+ V+W S+L+ C+++ R D A+ A + L++I+P+ + L NI + KW++
Sbjct: 537 PMQPNSVIWASILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDAS 596
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K+R ++++R KT G S + V QVH+F DK+HPR EI LE +
Sbjct: 597 KIRMLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSHPRILEIIAMLEEI 645
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 189/410 (46%), Gaps = 42/410 (10%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAY--ASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
+L YA +FD + TA+ + + F L+R M RR +P+ F +
Sbjct: 52 HLRYALHLFDRMPASTFLFDTALRACFRAGTSSGDPDIPFVLFRRM-RRAAVRPDGFTF- 109
Query: 119 HVLKSCPDVLESRG--TKMVHTQIVKSGFEQY-PVVETALVNSYSRSGNDIGIARKLFDE 175
H L C R M+H +++ P V +L++ Y+ G G R+ FDE
Sbjct: 110 HFLFKCSSSSRPRALLCTMLHAACLRTMLPSAAPFVANSLIHMYTELGL-AGDVRRAFDE 168
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
+ ++ VSWT +ISG ++G + +A L P RDV +W S+IA ++ +A+ F
Sbjct: 169 IPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCF 228
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
+ M +S+ I P+ VT++ LSA L+LG +H V G+ + + ALIDMY
Sbjct: 229 KNM---LSEGIAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMY 285
Query: 296 GKCGSLKEARRAFDRNSK-KRLTSWNSMINSFALHGQSENSICVFEEM------------ 342
KCG AR FD + +R SWN++I+ + HG + + +F++M
Sbjct: 286 AKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMI 345
Query: 343 ----------------MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRI 386
M + H++R D T +SLL+AC G + QGRA + + +
Sbjct: 346 TGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACI-ELRLV 404
Query: 387 EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
E I L+D+ + GR EA V + M + D W +++ G G
Sbjct: 405 ETDIYIGTALLDMYMKCGRVNEATIVFQRMG-KRDVHAWTAMIAGLAFNG 453
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 162/337 (48%), Gaps = 11/337 (3%)
Query: 167 GIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNG 226
GI KL S +V T +I Y + ++ ++F+ +P + NS+I +
Sbjct: 1021 GIVHKLGFSCSSVHV--QTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLRCN 1078
Query: 227 LFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG--KVIHGYVYRNGLDLD 284
+F A+ M + + + P+ VT + AI + L +++H + + G ++D
Sbjct: 1079 MFDAALEILHCM---IVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEMD 1135
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
+ ++LI Y G L + F+ + + ++I++ A +G ++ +F++M+
Sbjct: 1136 MAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMV- 1194
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
++PD VTF+ + C G+ E+GR +LM + ++P H+ C+V+LL R G
Sbjct: 1195 --SSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDG 1252
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLAN 464
+EA+E+++ + W SLL CK +G + A LI++ + + ++N
Sbjct: 1253 FVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKDPATTLQVSN 1312
Query: 465 IYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQ 501
+ ++G + ++++M + K+ G S IEV +
Sbjct: 1313 FFNDIGDRETALRIKEMTNVKEVKKS-GHSLIEVSHR 1348
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 154/363 (42%), Gaps = 48/363 (13%)
Query: 180 NVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMG 239
N+ +++ Y+ +GD + + + DV +WNS+++ G +A+ + ++M
Sbjct: 930 NIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQM- 988
Query: 240 MEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSF-ISNALIDMYGKC 298
+ P+ + V L+ G TG QLG IHG V++ G S + LIDMYGKC
Sbjct: 989 --LWHGKMPSIRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKC 1046
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD-HNIRPDGVTF 357
+ F+ L NS+I S + ++ E++ C + PD VTF
Sbjct: 1047 CCFDHSLAIFNEIPSIALECCNSLITSSLRCNMFDAAL----EILHCMIVEGVTPDDVTF 1102
Query: 358 ------ISL-----LNACT--HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
ISL L +C H LV+ G F++ I Y C AG
Sbjct: 1103 SATMKAISLSASPSLTSCQMLHSCLVKLG---FEMDMAV--CSSLITAYAC-------AG 1150
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGYGIML 462
+ + + +G+ ++P+ + + ++++ C YG A +++ + P+N + +
Sbjct: 1151 QLSSSHLIFEGL-LDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLCAI 1209
Query: 463 ANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
A + G ++E R V ++++ E+D F + R + +A+
Sbjct: 1210 AGC-DQAGMFEEGRLVIELMRASR----------ELDPDERHFACMVNLLSRDGFVKEAM 1258
Query: 523 ESM 525
E M
Sbjct: 1259 EMM 1261
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 37/201 (18%)
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+M+H+ +VK GFE V ++L+ +Y+ +G + + +F+ + D NV+ +TA+IS R
Sbjct: 1121 QMLHSCLVKLGFEMDMAVCSSLITAYACAGQ-LSSSHLIFEGLLDPNVICFTAIISACAR 1179
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
GD A LFD M +GL D ++F
Sbjct: 1180 YGDGARAMELFDQM---------------VSSGLKPDNVTF------------------- 1205
Query: 254 VCALSAIGHTGMLQLGK-VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
+CA++ GM + G+ VI LD D ++++ + G +KEA +++
Sbjct: 1206 LCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSP 1265
Query: 313 KKRLT-SWNSMINSFALHGQS 332
+ T +W+S++ S HG++
Sbjct: 1266 LRHYTKAWSSLLQSCKAHGEN 1286
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 106/233 (45%), Gaps = 14/233 (6%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF---RRMGME 241
+A+++ Y V + SLF +P ++ N V+ G L + I F RR +E
Sbjct: 832 SALVNHYMHVESPHASLSLFRELPLQNTAMCNVVLRGLGNLKLTEELICCFLDMRRQYLE 891
Query: 242 VSDNIRPNQVTLVCALSAIGHTG-MLQLGKVIHGYVYRNG-LDLDSFISNALIDMYGKCG 299
+ N ++ A+ G L+ G+ +HG V + G + + F+SN+L+D+Y G
Sbjct: 892 L------NGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIG 945
Query: 300 SLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFIS 359
+ +A + + + SWNS+++ +A G + ++ ++M+ H P +F+S
Sbjct: 946 DSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLW---HGKMPSIRSFVS 1002
Query: 360 LLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
LL G + G ++ K + L+D+ G+ F+ +L +
Sbjct: 1003 LLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAI 1055
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 19/272 (6%)
Query: 206 SMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGM 265
+M RDV + N +I G ++GL A + +R M V+ IR T L
Sbjct: 756 TMAVRDVASLNRMITGFIRDGLADRARAVYRWM---VASGIRETPHTFSTILGVCSTYEA 812
Query: 266 LQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINS 325
LQL HG V GL + F+ +AL++ Y S + F + N ++
Sbjct: 813 LQL----HGRVLALGLCCNPFVGSALVNHYMHVESPHASLSLFRELPLQNTAMCNVVLRG 868
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG-LVEQGRAYFKLMTKTY 384
+E IC F +M R + +G+++ + C G +EQGR ++ K
Sbjct: 869 LGNLKLTEELICCFLDMRR---QYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAG 925
Query: 385 RIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK--IEPDEVVWGSLLNGCKIYGRTDFAE 442
I I LVDL G ++++ VK + + D + W S+L+ G A
Sbjct: 926 WIPSNIFLSNSLVDLYSAIG---DSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAV 982
Query: 443 FAVKKLIEID--PNNGGYGIMLANIYGELGKW 472
+ +K+++ P+ + +LA + G+ G W
Sbjct: 983 YYLKQMLWHGKMPSIRSFVSLLA-LSGKTGDW 1013
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 260/474 (54%), Gaps = 27/474 (5%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMV--RR---GQPQ 111
++ ++ AR +FD + + + M++ YA + DMV RR P
Sbjct: 204 VQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRG-----------DMVEARRLFDAAPV 252
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
+ F + V+ G ++ + E+ V A+V +Y + + A++
Sbjct: 253 RDVFTWTAVVSG----YAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQR-RMMDEAKE 307
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
LF+ M RNV SW M++GY + G ++ A ++FD+MP +D +W +++A +Q G +
Sbjct: 308 LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
+ F MG + + N+ C LS L+ G +HG + R G + F+ NAL
Sbjct: 368 LQLFIEMG-RCGEWV--NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNAL 424
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIR 351
+ MY KCG++++AR AF+ ++ + SWN+MI +A HG + ++ +F+ MMR + +
Sbjct: 425 LAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFD-MMRTT--STK 481
Query: 352 PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALE 411
PD +T + +L AC+H GLVE+G +YF M + + + EHY C++DLLGRAGR EA +
Sbjct: 482 PDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHD 541
Query: 412 VVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGK 471
++K M EPD +WG+LL +I+ + A +K+ E++P N G ++L+NIY GK
Sbjct: 542 LMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGK 601
Query: 472 WDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
W + RK+R M+++R K PG SWIEV +VH F + D HP E+IY LE +
Sbjct: 602 WRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDL 655
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 185/397 (46%), Gaps = 50/397 (12%)
Query: 60 SNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPH 119
S+L AR +FD + ++ Y MI+++A+ S Y D+ P+ + +
Sbjct: 114 SSLADARGLFDEMPVRDSVTYNVMISSHANH--GLVSLARHYFDLA----PEKDAVSWNG 167
Query: 120 VLKSC---PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+L + V E+RG + S E + AL++ Y + G + AR+LFD M
Sbjct: 168 MLAAYVRNGRVEEARG-------LFNSRTEWDVISWNALMSGYVQWGK-MSEARELFDRM 219
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
R+VVSW M+SGY R GD+ A LFD+ P RDV W +V++G QNG+ +A F
Sbjct: 220 PGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFD 279
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS-NALIDMY 295
M N V+ ++A M+ K + N + + S N ++ Y
Sbjct: 280 AMPER-------NAVSWNAMVAAYIQRRMMDEAKELF-----NMMPCRNVASWNTMLTGY 327
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
+ G L+EA+ FD +K SW +M+ +++ G SE ++ +F EM RC + R
Sbjct: 328 AQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRS--- 384
Query: 356 TFISLLNACTHGGLVEQG-RAYFKLMTKTYRIEPQIEHYGCLVD--LLG---RAGRFEEA 409
F +L+ C +E G + + +L+ Y + GC V LL + G E+A
Sbjct: 385 AFACVLSTCADIAALECGMQLHGRLIRAGYGV-------GCFVGNALLAMYFKCGNMEDA 437
Query: 410 LEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
+ M+ E D V W +++ G Y R F + A++
Sbjct: 438 RNAFEEME-ERDVVSWNTMIAG---YARHGFGKEALE 470
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 143/350 (40%), Gaps = 74/350 (21%)
Query: 156 VNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAW 215
+ ++ R+G + A +LF M R+ ++ AM++GY+ G + AASLF ++P D ++
Sbjct: 45 ITAHMRAGR-VADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSY 103
Query: 216 NSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK----- 270
N+++ + +DA F M + + VT +S+ + G++ L +
Sbjct: 104 NTLLHALAVSSSLADARGLFDEMPVR-------DSVTYNVMISSHANHGLVSLARHYFDL 156
Query: 271 -----------VIHGYVYRNG------------LDLDSFISNALIDMYGKCGSLKEARRA 307
++ YV RNG + D NAL+ Y + G + EAR
Sbjct: 157 APEKDAVSWNGMLAAYV-RNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEAREL 215
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FDR + + SWN M++ +A G E R D D T+ ++++
Sbjct: 216 FDRMPGRDVVSWNIMVSGYARRGD-------MVEARRLFDAAPVRDVFTWTAVVSGYAQN 268
Query: 368 GLVEQGRAYFKLMTKT------------------------YRIEP--QIEHYGCLVDLLG 401
G++E+ R F M + + + P + + ++
Sbjct: 269 GMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYA 328
Query: 402 RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
+AG EEA V M + D V W ++L Y + +E ++ IE+
Sbjct: 329 QAGMLEEAKAVFDTMP-QKDAVSWAAMLAA---YSQGGCSEETLQLFIEM 374
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 120/299 (40%), Gaps = 27/299 (9%)
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I+ + R G + +A LF +MP R +N+++AG + NG A S FR + R
Sbjct: 45 ITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP-------R 97
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P+ + L A+ + L + + + DS N +I + G + AR
Sbjct: 98 PDNYSYNTLLHALAVSSSLADARGL----FDEMPVRDSVTYNVMISSHANHGLVSLARHY 153
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
FD +K SWN M+ ++ +G+ E + +F + D +++ +L++
Sbjct: 154 FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF-------NSRTEWDVISWNALMSGYVQW 206
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
G + + R F M + + +V R G EA + + D W +
Sbjct: 207 GKMSEARELFDRMPGR-----DVVSWNIMVSGYARRGDMVEARRLFDAAPVR-DVFTWTA 260
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+++G Y + E A + + N + Y + DE +++ M+ RN
Sbjct: 261 VVSG---YAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRN 316
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 274/517 (52%), Gaps = 17/517 (3%)
Query: 18 AILERCNHINHLKQ---LQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT 74
+IL C+ + LK + F G + F LV L + A+ +FD +
Sbjct: 348 SILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLC-VREAQTVFDLMPH 406
Query: 75 PNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTK 134
N + ++ + Y + +++R+MV G +P+ +L +C D+ + + K
Sbjct: 407 RNVVTWNSLSSCYVN-CGFPQKGLNVFREMVLNGV-KPDLVTMLSILHACSDLQDLKSGK 464
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
++H V+ G + V AL++ Y++ + A+ +FD + R V SW +++ Y
Sbjct: 465 VIHGFAVRHGMVEDVFVCNALLSLYAKCVC-VREAQVVFDLIPHREVASWNGILTAYFTN 523
Query: 195 GDIKNAASLFDSMPDRDVPA----WNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
+ + +F M +V A W+ VI GC +N +A+ FR+M + +P++
Sbjct: 524 KEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQ---TMGFKPDE 580
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
T+ L A + L++GK IH YV+R+ D D +NAL+DMY KCG L +R FD
Sbjct: 581 TTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDM 640
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
K + SWN+MI + +HG + ++ +FE+M+ ++PD TF +L+AC+H LV
Sbjct: 641 MPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSM---VKPDSATFTCVLSACSHSMLV 697
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
E+G F M++ + +EP+ EHY C+VD+ RAG EEA ++ M +EP + W + L
Sbjct: 698 EEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLA 757
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
GC++Y + A+ + KKL EIDPN + L NI W E K+RK++K+R KT
Sbjct: 758 GCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKT 817
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
PGCSW V +VH F + DK++ +++IY+ L+ + A
Sbjct: 818 PGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFA 854
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/469 (22%), Positives = 199/469 (42%), Gaps = 77/469 (16%)
Query: 16 VLAILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
V +IL C+ + LK ++ F+ G + F + V F K + A+ +FD +
Sbjct: 144 VSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNF-YAKCLCVREAQTVFDLM 202
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
+ + ++ + Y + +++R+MV G +P+ +L +C D+ + +
Sbjct: 203 PHRDVVTWNSLSSCYVN-CGFPQKGLNVFREMVLDGV-KPDPVTVSCILSACSDLQDLKS 260
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
K +H +K G + V ALVN Y
Sbjct: 261 GKAIHGFALKHGMVENVFVSNALVNLYESCLC---------------------------- 292
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
++ A ++FD MP R+V WNS+ + G ++ FR MG+ + ++P+ +
Sbjct: 293 ----VREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGL---NGVKPDPMA 345
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
+ L A L+ GK IHG+ ++G+ D F+ AL+++Y C ++EA+ FD
Sbjct: 346 MSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMP 405
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT------- 365
+ + +WNS+ + + G + + VF EM+ + ++PD VT +S+L+AC+
Sbjct: 406 HRNVVTWNSLSSCYVNCGFPQKGLNVFREMVL---NGVKPDLVTMLSILHACSDLQDLKS 462
Query: 366 ----HGGLVEQG--------RAYFKLMTK---------TYRIEP--QIEHYGCLVDLLGR 402
HG V G A L K + + P ++ + ++
Sbjct: 463 GKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFT 522
Query: 403 AGRFEEALEVVKGM---KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKL 448
+E+ L + M +++ DE+ W ++ GC R + A +K+
Sbjct: 523 NKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKM 571
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 161/366 (43%), Gaps = 46/366 (12%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD L + + ++ Y + +++R M + + N +L C
Sbjct: 94 ARRVFDDLVARDVVTWNSLSACYVN-CGFPQQGLNVFRKM-GLNKVKANPLTVSSILPGC 151
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
D+ + + K +H +V+ G + V +A VN Y++
Sbjct: 152 SDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLC-------------------- 191
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
++ A ++FD MP RDV WNS+ + G ++ FR M V D
Sbjct: 192 ------------VREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREM---VLD 236
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
++P+ VT+ C LSA L+ GK IHG+ ++G+ + F+SNAL+++Y C ++EA
Sbjct: 237 GVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREA 296
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
+ FD + + +WNS+ + + G + + VF EM + ++PD + S+L AC
Sbjct: 297 QAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGL---NGVKPDPMAMSSILPAC 353
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGC--LVDLLGRAGRFEEALEVVKGMKIEPDE 422
+ ++ G+ K +E + + C LV+L EA V M +
Sbjct: 354 SQLKDLKSGKTIHGFAVKHGMVE---DVFVCTALVNLYANCLCVREAQTVFDLMP-HRNV 409
Query: 423 VVWGSL 428
V W SL
Sbjct: 410 VTWNSL 415
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 109/212 (51%), Gaps = 8/212 (3%)
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
MSD ++ A I Y + ++ A +FD + RDV WNS+ A G ++ F
Sbjct: 72 MSDVSI--GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVF 129
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
R+MG+ + ++ N +T+ L L+ GK IHG+V R+G+ D F+S+A ++ Y
Sbjct: 130 RKMGL---NKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFY 186
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KC ++EA+ FD + + +WNS+ + + G + + VF EM+ ++PD V
Sbjct: 187 AKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVL---DGVKPDPV 243
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIE 387
T +L+AC+ ++ G+A K +E
Sbjct: 244 TVSCILSACSDLQDLKSGKAIHGFALKHGMVE 275
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 8/204 (3%)
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
+GL ++AI + + I+P++ + A + K H R G+ D
Sbjct: 18 HGLPNEAIKIYTS---SRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSD 74
Query: 285 SFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
I NA I YGKC ++ ARR FD + + +WNS+ + G + + VF +M
Sbjct: 75 VSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGL 134
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
+ ++ + +T S+L C+ ++ G+ + + +E + V+ +
Sbjct: 135 ---NKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVE-DVFVSSAFVNFYAKCL 190
Query: 405 RFEEALEVVKGMKIEPDEVVWGSL 428
EA V M D V W SL
Sbjct: 191 CVREAQTVFDLMP-HRDVVTWNSL 213
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 260/474 (54%), Gaps = 27/474 (5%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMV--RR---GQPQ 111
++ ++ AR +FD + + + M++ YA + DMV RR P
Sbjct: 79 VQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRG-----------DMVEARRLFDAAPV 127
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
+ F + V+ G ++ + E+ V A+V +Y + + A++
Sbjct: 128 RDVFTWTAVVSG----YAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQR-RMMDEAKE 182
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
LF+ M RNV SW M++GY + G ++ A ++FD+MP +D +W +++A +Q G +
Sbjct: 183 LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 242
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
+ F MG + + N+ C LS L+ G +HG + R G + F+ NAL
Sbjct: 243 LQLFIEMG-RCGEWV--NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNAL 299
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIR 351
+ MY KCG++++AR AF+ ++ + SWN+MI +A HG + ++ +F+ MMR + +
Sbjct: 300 LAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFD-MMRTT--STK 356
Query: 352 PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALE 411
PD +T + +L AC+H GLVE+G +YF M + + + EHY C++DLLGRAGR EA +
Sbjct: 357 PDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHD 416
Query: 412 VVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGK 471
++K M EPD +WG+LL +I+ + A +K+ E++P N G ++L+NIY GK
Sbjct: 417 LMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGK 476
Query: 472 WDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
W + RK+R M+++R K PG SWIEV +VH F + D HP E+IY LE +
Sbjct: 477 WRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDL 530
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 146/300 (48%), Gaps = 34/300 (11%)
Query: 154 ALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVP 213
AL++ Y + G + AR+LFD M R+VVSW M+SGY R GD+ A LFD+ P RDV
Sbjct: 73 ALMSGYVQWGK-MSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF 131
Query: 214 AWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIH 273
W +V++G QNG+ +A F M N V+ ++A M+ K +
Sbjct: 132 TWTAVVSGYAQNGMLEEARRVFDAMP-------ERNAVSWNAMVAAYIQRRMMDEAKELF 184
Query: 274 GYVYRNGLDLDSFIS-NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQS 332
N + + S N ++ Y + G L+EA+ FD +K SW +M+ +++ G S
Sbjct: 185 -----NMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCS 239
Query: 333 ENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG-RAYFKLMTKTYRIEPQIE 391
E ++ +F EM RC + R F +L+ C +E G + + +L+ Y +
Sbjct: 240 EETLQLFIEMGRCGEWVNRS---AFACVLSTCADIAALECGMQLHGRLIRAGYGV----- 291
Query: 392 HYGCLVD--LLG---RAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
GC V LL + G E+A + M+ E D V W +++ G Y R F + A++
Sbjct: 292 --GCFVGNALLAMYFKCGNMEDARNAFEEME-ERDVVSWNTMIAG---YARHGFGKEALE 345
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 123/279 (44%), Gaps = 33/279 (11%)
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
M R+ V++ MIS + G + A FD P++D +WN ++A +NG +A F
Sbjct: 1 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF 60
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG---YVYRNGLDLDSFISNALI 292
D I N + +G +Q GK+ + G D+ S+ N ++
Sbjct: 61 N--SRTEWDVISWNALM----------SGYVQWGKMSEARELFDRMPGRDVVSW--NIMV 106
Query: 293 DMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRP 352
Y + G + EARR FD + + +W ++++ +A +G E + VF+ M
Sbjct: 107 SGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM-------PER 159
Query: 353 DGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
+ V++ +++ A ++++ + F +M + + ++ +AG EEA V
Sbjct: 160 NAVSWNAMVAAYIQRRMMDEAKELFNMMPCR-----NVASWNTMLTGYAQAGMLEEAKAV 214
Query: 413 VKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEI 451
M + D V W ++L Y + +E ++ IE+
Sbjct: 215 FDTMP-QKDAVSWAAMLAA---YSQGGCSEETLQLFIEM 249
>gi|297734691|emb|CBI16742.3| unnamed protein product [Vitis vinifera]
Length = 674
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 160/460 (34%), Positives = 268/460 (58%), Gaps = 23/460 (5%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +F+ + NT +TAM+ +Y A L+ +M PQ N + + ++ C
Sbjct: 212 ARSVFNQMPEKNTISWTAMMKSYVDN-GRTDEALKLFHEM-----PQRNLYSWNTMISGC 265
Query: 125 PDVLE-SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
D + K+ H +++ V T +V+ +R+G +AR+ FD+M ++++ +
Sbjct: 266 LDGKRVNEAFKLFHLMPLRNA-----VSWTIMVSGLARNGF-TKLAREYFDQMPNKDIAA 319
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
W AMI+ Y I A+ LF+ M +R++ WN++I G ++ +A+ + + + +
Sbjct: 320 WNAMITAYVDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDGEAM---KHLILMLR 376
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
IRPN+ T+ L++ GML+L + H G + ++ +SNALI MY + G +
Sbjct: 377 SCIRPNETTMTIILTSC--WGMLELMQA-HALAIVVGCECETSLSNALITMYSRIGDISS 433
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
+R AF+ K + SW +M+ +F HG ++++ VF M++ +PD +TF+ +L+A
Sbjct: 434 SRIAFESLKAKDVVSWTAMLLAFTYHGHGDHALHVFGHMLKS---GTKPDEITFVGVLSA 490
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM-KIEPDE 422
C+H GLV++G+ F M++ Y +EP+ EHY CLVD+LGRAG+ EA++VV M + E D
Sbjct: 491 CSHAGLVKKGQKLFDSMSRAYGLEPRAEHYSCLVDILGRAGQVHEAMDVVWKMPECERDG 550
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
V G+LL C+++G + A++ +KLIE+ PN+ G ++LAN++ G WDE +VRK +
Sbjct: 551 AVLGALLGACRLHGNVEMADYIGQKLIELQPNSSGGYVLLANVFAARGNWDEFAEVRKKM 610
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
KDRN K PG S IEV + H F + DK+HP+ EEIY+ L
Sbjct: 611 KDRNVRKVPGFSQIEVKGKCHAFFAGDKSHPQVEEIYELL 650
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 179/416 (43%), Gaps = 51/416 (12%)
Query: 55 CTLKLS------NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRG 108
C +K+S N+ AR +FD + + YTAMITAY A L++ M R
Sbjct: 72 CNIKISQLGRCGNVRGARKLFDEMPHHDNVSYTAMITAYLKN-NELRKAEKLFQTMPDRT 130
Query: 109 QPQPNQFIYPHVLKSCPDVLESRGTKMVHT----------------QIVKSG--FEQYP- 149
+ I + D + M+ T Q+ K+ F+Q P
Sbjct: 131 IVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQMPA 190
Query: 150 ---VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDS 206
V T +V Y+R+G I AR +F++M ++N +SWTAM+ Y G A LF
Sbjct: 191 KNVVSWTTMVLGYARNG-LIDQARSVFNQMPEKNTISWTAMMKSYVDNGRTDEALKLFHE 249
Query: 207 MPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGML 266
MP R++ +WN++I+GC ++A F M + N V+ +S + G
Sbjct: 250 MPQRNLYSWNTMISGCLDGKRVNEAFKLFHLMPLR-------NAVSWTIMVSGLARNGFT 302
Query: 267 QLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSF 326
+L + + + D NA+I Y + EA F+ +++ + +WN+MI+ +
Sbjct: 303 KLAR----EYFDQMPNKDIAAWNAMITAYVDECLIVEASELFNLMTERNIVTWNAMIDGY 358
Query: 327 ALHGQSENSICVFEEMMR-CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
A H ++ M+R C IRP+ T +L +C G++E +A+ +
Sbjct: 359 ARHRPDGEAMKHLILMLRSC----IRPNETTMTIILTSCW--GMLELMQAHALAIVVGCE 412
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
E + + L+ + R G + + +K + D V W ++L +G D A
Sbjct: 413 CETSLSN--ALITMYSRIGDISSSRIAFESLKAK-DVVSWTAMLLAFTYHGHGDHA 465
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 148/334 (44%), Gaps = 37/334 (11%)
Query: 145 FEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
F++ P V TA++ +Y ++ N++ A KLF M DR +V+ +AMI GY + G + +A
Sbjct: 92 FDEMPHHDNVSYTAMITAYLKN-NELRKAEKLFQTMPDRTIVAESAMIDGYAKAGLMDSA 150
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
+FD+M D +V +W S+I+G ++G + A F +M + N V+ +
Sbjct: 151 QKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQMPAK-------NVVSWTTMVLGY 203
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
G++ + V+ + ++ A++ Y G EA + F ++ L SWN
Sbjct: 204 ARNGLIDQARS----VFNQMPEKNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWN 259
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
+MI S L G+ N +M + + V++ +++ G + R YF M
Sbjct: 260 TMI-SGCLDGKRVNEAFKLFHLMPLR------NAVSWTIMVSGLARNGFTKLAREYFDQM 312
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
I + ++ EA E+ M E + V W ++++G Y R
Sbjct: 313 PNK-----DIAAWNAMITAYVDECLIVEASELFNLM-TERNIVTWNAMIDG---YARHRP 363
Query: 441 AEFAVKKLIE-----IDPNNGGYGIMLANIYGEL 469
A+K LI I PN I+L + +G L
Sbjct: 364 DGEAMKHLILMLRSCIRPNETTMTIILTSCWGML 397
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 283 LDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEM 342
LD + N I G+CG+++ AR+ FD S+ +MI ++ + + + +F+ M
Sbjct: 67 LDIYNCNIKISQLGRCGNVRGARKLFDEMPHHDNVSYTAMITAYLKNNELRKAEKLFQTM 126
Query: 343 MRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGR 402
D I V ++++ GL++ + F M I+ + + L+ R
Sbjct: 127 ---PDRTI----VAESAMIDGYAKAGLMDSAQKVFDAM-----IDTNVFSWTSLISGYFR 174
Query: 403 AGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIML 462
G+ +A ++ M + + V W +++ G G D A ++ E N + M+
Sbjct: 175 DGQVAKACQLFDQMPAK-NVVSWTTMVLGYARNGLIDQARSVFNQMPE--KNTISWTAMM 231
Query: 463 ANIYGELGKWDEVRKVRKMLKDRNAY 488
+ Y + G+ DE K+ + RN Y
Sbjct: 232 KS-YVDNGRTDEALKLFHEMPQRNLY 256
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 149/393 (37%), Positives = 224/393 (56%), Gaps = 13/393 (3%)
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
VH + G P V++ V+ Y+ G D+G R F E+ +VV TAM+ + G
Sbjct: 146 VHAAAFQHGHATDPHVQSGAVSMYAAVG-DVGAVRAAFAEIVSPDVVCVTAMLGALSAGG 204
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM---GMEVSDNIRPNQVT 252
D+ A LFD MP RD AWN+++ G + G +A+ F M G+ VS +VT
Sbjct: 205 DVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVS------EVT 258
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
LV L+A G L+ G +H YV G+ + + AL+DMY KCG + + F+
Sbjct: 259 LVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETMR 318
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
++ + +W S ++ A++G E + +F+ M + + P+GVTF+++L C+ GLVE+
Sbjct: 319 ERNIYTWTSALSGLAMNGMGEECLELFKRM---ESAGMEPNGVTFVAVLRGCSVAGLVEE 375
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
GRA F M +++EP +EHYGC+VDL GRAGR ++A++ + M +EP E VWG+LLN
Sbjct: 376 GRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVWGALLNAS 435
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+I+ D + A+ KL EI+ N ++L+NIY E W V KVR M+K + K PG
Sbjct: 436 RIHNNVDLGKHAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNMMKSKGVKKMPG 495
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
CS IEVD +VH+F K+HPR ++I L M
Sbjct: 496 CSAIEVDGKVHEFFVGSKSHPRYKDIQTMLAEM 528
>gi|2245038|emb|CAB10457.1| hypothetical protein [Arabidopsis thaliana]
gi|7268435|emb|CAB80955.1| hypothetical protein [Arabidopsis thaliana]
Length = 851
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 166/503 (33%), Positives = 274/503 (54%), Gaps = 42/503 (8%)
Query: 35 FLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHA 94
+LT F K++ C ++ ++ A +F + NT + +++ + P+
Sbjct: 51 YLTKPSDQDQIFPLNKIIARC-VRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRM 109
Query: 95 SSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETA 154
A L+ ++ P+P+ F Y +++ SC + V+ + +S F++ P + A
Sbjct: 110 MEAHQLFDEI-----PEPDTFSY-NIMLSC-------YVRNVNFEKAQSFFDRMPFKDAA 156
Query: 155 ----LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR 210
++ Y+R G ++ AR+LF M ++N VSW AMISGY GD++ A+ F P R
Sbjct: 157 SWNTMITGYARRG-EMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVR 215
Query: 211 DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGK 270
V AW ++I G + A + F+ M + N VT +S + G
Sbjct: 216 GVVAWTAMITGYMKAKKVELAEAMFKDM------TVNKNLVTWNAMISGYVENSRPEDGL 269
Query: 271 VIHGYVYRNGLDLDSF-ISNAL--------IDMYGKCGSLKEARRAFDRNSKKRLTSWNS 321
+ + G+ +S +S+AL I MY KCG L +A + F+ KK + +WN+
Sbjct: 270 KLFRAMLEEGIRPNSSGLSSALLGCTLTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNA 329
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
MI+ +A HG ++ ++C+F EM+ D+ IRPD +TF+++L AC H GLV G AYF+ M
Sbjct: 330 MISGYAQHGNADKALCLFREMI---DNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV 386
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+ Y++EPQ +HY C+VDLLGRAG+ EEAL++++ M P V+G+LL C+++ + A
Sbjct: 387 RDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELA 446
Query: 442 EFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA-----YKTPGCSWI 496
EFA +KL++++ N + LANIY +W++V +VRK +K+ N K PG SWI
Sbjct: 447 EFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVERVKVPGYSWI 506
Query: 497 EVDKQVHQFHSLDKTHPRTEEIY 519
E+ +VH F S D+ HP + I+
Sbjct: 507 EIRNKVHHFRSSDRIHPELDSIH 529
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 264/471 (56%), Gaps = 42/471 (8%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
K ++ A+ +FD + + + + MI+ Y + +A ++R ++ G +PN +
Sbjct: 395 FKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLN-RMSEAAVKMFRYLLALGI-KPNAVM 452
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
L +C + R + +H ++K+ +E VE+AL++ YS+ G D
Sbjct: 453 VASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGR--------LD-- 502
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+S Y +F M +D WNS+I+ QNG +A+ FR
Sbjct: 503 -----------LSHY-----------MFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFR 540
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+M ME ++ N VT+ LSA + GK IHG + + + D F +ALIDMYG
Sbjct: 541 QMIME---GVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYG 597
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC-QDHNIRPDGV 355
KCG+L+ A R F+ +K SWNS+I+++ HG + S+ +++ C Q+ + D V
Sbjct: 598 KCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESV----DLLCCMQEEGFKADHV 653
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
TF++L++AC H G V++G F+ MT+ Y IEPQ+EH C+VDL RAG+ ++A++ +
Sbjct: 654 TFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIAD 713
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M +PD +WG+LL+ C+++ + AE A ++L ++DP+N GY ++++NI G+WD V
Sbjct: 714 MPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGV 773
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K+R+++KD+ K PG SW++V+ H F + DK HP +EEIY +L+S++
Sbjct: 774 SKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADKNHPDSEEIYMSLKSLI 824
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 162/370 (43%), Gaps = 44/370 (11%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
L AR +FD + + L+ M+ Y + +SA L+R M R PN L
Sbjct: 198 LDGAREVFDGMDERDCVLWNVMMDGYV-KAGDVASAVGLFRVM-RASGCDPNFATLACFL 255
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
C + +HT VK G E E A+ N+
Sbjct: 256 SVCAAEADLLSGVQLHTLAVKYGLEP----EVAVANT----------------------- 288
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
++S Y + ++ A LF MP D+ WN +I+GC QNGL DA+ F M
Sbjct: 289 -----LVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQ-- 341
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
++P+ VTL L A+ + GK IHGY+ RN +D F+ +AL+D+Y KC +
Sbjct: 342 -KSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDV 400
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+ A+ FD + ++MI+ + L+ SE ++ +F ++ I+P+ V S L
Sbjct: 401 RMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLAL---GIKPNAVMVASTL 457
Query: 362 NACTHGGLVEQGRAYFKLMTK-TYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
AC + G+ + K Y +E L+D+ + GR + + + M +
Sbjct: 458 PACASMAAMRIGQELHGYVLKNAYEGRCYVE--SALMDMYSKCGRLDLSHYMFSKMSAK- 514
Query: 421 DEVVWGSLLN 430
DEV W S+++
Sbjct: 515 DEVTWNSMIS 524
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 135/252 (53%), Gaps = 8/252 (3%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
+A++ Y + D++ A ++FD+ DV +++I+G N + A+ FR + ++
Sbjct: 388 SALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYL---LAL 444
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
I+PN V + L A +++G+ +HGYV +N + ++ +AL+DMY KCG L +
Sbjct: 445 GIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLS 504
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
F + S K +WNSMI+SFA +G+ E ++ +F +M+ ++ + VT S+L+AC
Sbjct: 505 HYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIM---EGVKYNNVTISSILSAC 561
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+ G+ ++ K I + L+D+ G+ G E AL V + M E +EV
Sbjct: 562 AGLPAIYYGKEIHGIIIKG-PIRADLFAESALIDMYGKCGNLELALRVFEHMP-EKNEVS 619
Query: 425 WGSLLNGCKIYG 436
W S+++ +G
Sbjct: 620 WNSIISAYGAHG 631
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 122/266 (45%), Gaps = 38/266 (14%)
Query: 109 QPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGI 168
P+P+ P+V+KSC + ++VH G ++ V +AL+ Y+ +G G
Sbjct: 142 SPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDG- 200
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
AR++FD M +R+ V W M+ GY + GD+ +A LF M +GC
Sbjct: 201 AREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMR----------ASGCD----- 245
Query: 229 SDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS 288
PN TL C LS L G +H + GL+ + ++
Sbjct: 246 -------------------PNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVA 286
Query: 289 NALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDH 348
N L+ MY KC L+EA R F + L +WN MI+ +G ++++ +F +M Q
Sbjct: 287 NTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDM---QKS 343
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGR 374
++PD VT SLL A T +QG+
Sbjct: 344 GLQPDSVTLASLLPALTELNGFKQGK 369
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 9/260 (3%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPA---WNSVIAGCTQNGLFSDAISFFRRMGME 241
T ++ Y ++A ++F S+P A WN +I G T G A+ F+ +M
Sbjct: 80 TRLVGMYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAH 139
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
S RP+ TL + + G L LG+++H GLD D ++ +ALI MY G L
Sbjct: 140 PSSP-RPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLL 198
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
AR FD ++ WN M++ + G +++ +F M + P+ T L
Sbjct: 199 DGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVM---RASGCDPNFATLACFL 255
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
+ C + G L K Y +EP++ LV + + EEA + G+ D
Sbjct: 256 SVCAAEADLLSGVQLHTLAVK-YGLEPEVAVANTLVSMYAKCQCLEEAWRLF-GLMPRDD 313
Query: 422 EVVWGSLLNGCKIYGRTDFA 441
V W +++GC G D A
Sbjct: 314 LVTWNGMISGCVQNGLVDDA 333
>gi|296084064|emb|CBI24452.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 268/509 (52%), Gaps = 40/509 (7%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLV-RFCTLKLSNLTYARFIFDHLTTPNT 77
+L+RC +K + + + G + F KLV ++ SN+ AR +FD L +
Sbjct: 13 LLQRCKGTKTIKSIHAQIIIGGFEENPFLGAKLVGKYAQCYESNIEDARKVFDCLPDRDV 72
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+++ +I YA+ A ++Y M R N++ +P VLK+C + + + + +H
Sbjct: 73 FVWNTIIQGYANLGPFME-ALNIYEYM-RCSGVAANRYTFPFVLKACGAMKDGKKGQAIH 130
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
+VK G + V ALV Y++ N+IG +R++
Sbjct: 131 GHVVKHGLDLDLFVGNALVAFYAKC-NEIGASRRV------------------------- 164
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI-RPNQVTLVCA 256
FD + ++D+ WNS+I+G NG DA+ F M D + P+ TLV
Sbjct: 165 ------FDMISEKDIVTWNSMISGYAINGCADDALVLFHNMLQVQGDTVYAPDSATLVAI 218
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
L A +Q G IH YV ++G++LD+ + + LI MY CG L AR FDR K +
Sbjct: 219 LPACAQAAAIQEGLWIHSYVIKSGIELDAALGSGLIAMYANCGLLNSARDVFDRIDDKNI 278
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
WN++I + +HG ++ ++ +F ++ D + PDGV F+ LL+A +H G+V +G
Sbjct: 279 VVWNAIIRCYGMHGHADEALKMFSGLI---DSGLHPDGVIFLCLLSAFSHAGMVAEGMEL 335
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
F+ M Y +E EHY +VD+LGRAG EA+E VK M ++P + V+G+LL C+I+
Sbjct: 336 FEKMGD-YGVEKSSEHYASVVDILGRAGFLHEAVEFVKNMPVQPGKDVYGALLGACRIHN 394
Query: 437 RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWI 496
+ AE +KL +DP+N G I+L +Y + GKW+ ++RK LK++N K GCS I
Sbjct: 395 NIELAEEIAEKLFVLDPDNAGRYIILVKMYEDAGKWENAARLRKALKEKNIRKPLGCSAI 454
Query: 497 EVDKQVHQFHSLDKTHPRTEEIYDALESM 525
E+ +H F DK+HP ++I+D LE +
Sbjct: 455 ELGCVLHTFGVEDKSHPFKDQIFDTLERL 483
>gi|115482212|ref|NP_001064699.1| Os10g0442700 [Oryza sativa Japonica Group]
gi|31432332|gb|AAP53975.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113639308|dbj|BAF26613.1| Os10g0442700 [Oryza sativa Japonica Group]
gi|215694632|dbj|BAG89823.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768315|dbj|BAH00544.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 493
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 153/422 (36%), Positives = 250/422 (59%), Gaps = 11/422 (2%)
Query: 112 PNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPV-VETALVNSYSRSGNDIGIAR 170
P+ +P + ++ + R + VH Q ++ G + + V +LV+ Y+ G+AR
Sbjct: 60 PSHLTFPFLARAAARLATPRLARAVHAQPLRRGLLPHDLHVSNSLVHMYAACALP-GLAR 118
Query: 171 KLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSD 230
+LFDE+ N VSW A++ GY + D+ A +F MP RDV +W+++I GC + G +
Sbjct: 119 RLFDEIPRPNHVSWNALLDGYAKCRDLPAARRVFARMPQRDVVSWSAMIDGCVKCGEHRE 178
Query: 231 AISFFRRMGMEVS--DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS 288
A++ F M + D +R N VT+V L A H G L G+ +H Y+ +G L+ ++
Sbjct: 179 ALAVFEMMEATAARHDGVRANDVTMVSVLGACAHLGDLVRGRKMHRYLEEHGFPLNIRLA 238
Query: 289 NALIDMYGKCGSLKEARRAFDRNSKKR--LTSWNSMINSFALHGQSENSICVFEEMMRCQ 346
+L+DMY KCG++ EA F + + WN++I A+HG S S+ +F++M +
Sbjct: 239 TSLVDMYAKCGAIVEALEVFQAVPVENTDVLIWNAVIGGLAVHGMSRESLQMFQKM---E 295
Query: 347 DHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRF 406
+ PD +T++SLL+AC HGGLV++ ++F+ + + + P +EHY CLVD+LGRAGR
Sbjct: 296 HAGVVPDEITYLSLLSACVHGGLVDEAWSFFRSL-EAQGLRPHVEHYACLVDVLGRAGRL 354
Query: 407 EEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIY 466
EEA VVK M ++P V G+LLN C ++G + E ++L+ + P++ G I L+NIY
Sbjct: 355 EEAYGVVKSMPMKPSVSVLGALLNACHLHGWVELGEAVGRQLVHLQPDHDGRYIGLSNIY 414
Query: 467 GELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
+W E +K RK++++R K PG S I+V + + +F + DKTHP + EIY AL ++
Sbjct: 415 AVARRWQEAKKARKVMEERGVKKVPGFSEIDVGRGICRFIAQDKTHPGSAEIY-ALLKLI 473
Query: 527 AL 528
A+
Sbjct: 474 AM 475
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 131/307 (42%), Gaps = 23/307 (7%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + PN + A++ YA R + R PQ + + ++ C
Sbjct: 117 ARRLFDEIPRPNHVSWNALLDGYAK-----CRDLPAARRVFAR-MPQRDVVSWSAMIDGC 170
Query: 125 PDVLESRGT-----KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDR 179
E R M T G V +++ + + G D+ RK+ + +
Sbjct: 171 VKCGEHREALAVFEMMEATAARHDGVRANDVTMVSVLGACAHLG-DLVRGRKMHRYLEEH 229
Query: 180 ----NVVSWTAMISGYTRVGDIKNAASLFDSMP--DRDVPAWNSVIAGCTQNGLFSDAIS 233
N+ T+++ Y + G I A +F ++P + DV WN+VI G +G+ +++
Sbjct: 230 GFPLNIRLATSLVDMYAKCGAIVEALEVFQAVPVENTDVLIWNAVIGGLAVHGMSRESLQ 289
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
F++M + P+++T + LSA H G++ + GL L+D
Sbjct: 290 MFQKME---HAGVVPDEITYLSLLSACVHGGLVDEAWSFFRSLEAQGLRPHVEHYACLVD 346
Query: 294 MYGKCGSLKEARRAFDRNS-KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQ-DHNIR 351
+ G+ G L+EA K ++ +++N+ LHG E V +++ Q DH+ R
Sbjct: 347 VLGRAGRLEEAYGVVKSMPMKPSVSVLGALLNACHLHGWVELGEAVGRQLVHLQPDHDGR 406
Query: 352 PDGVTFI 358
G++ I
Sbjct: 407 YIGLSNI 413
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 154/467 (32%), Positives = 259/467 (55%), Gaps = 12/467 (2%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L + A+ +FD + + + +I++Y A +++R M R + ++
Sbjct: 162 LGKMEVAKKVFDEIPERDVVSWNVLISSYVGHRKF-EDAIAVFRRMRRESNLKADEATVV 220
Query: 119 HVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSD 178
L +C + + +H + V + E + AL++ Y + G + AR +FDEM +
Sbjct: 221 STLSACSVLRNQEVGEEIH-RYVDAELEMTTKIGNALLDMYCKCGC-VDKARAIFDEMGN 278
Query: 179 RNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM 238
+NV+ WT+M+SGY G + A LF+ P RD+ W ++I G Q LF +A+ FR+M
Sbjct: 279 KNVICWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALKLFRKM 338
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
++ +RP+ LV L TG L+ GK +HGY++ N + LD + AL+D+Y KC
Sbjct: 339 QIQ---RLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVGTALVDVYAKC 395
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G +++A F ++ SW S+I A++G + ++ F +M ++ RPD +TFI
Sbjct: 396 GCVEKALEVFYEMKERDTASWTSVIYGLAVNGMTSKALDFFSQM---EEAGFRPDDITFI 452
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
+L AC HGGLVE+GR YF MTKTY+I+P+ EHY CL+DLL RAG +EA +++ + I
Sbjct: 453 GVLTACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYSCLIDLLCRAGLLDEAELLLEMIPI 512
Query: 419 EPDEVV---WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
E ++V + SLL+ C+ YG +E ++L ++ + +LA++Y +W++V
Sbjct: 513 ESSDIVVPLYCSLLSACRNYGNLKMSERVGRRLERVEVKDSSVHTLLASVYASANRWEDV 572
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
VR+ +K+ K PGCS IEV+ +H+F +H ++I+ L
Sbjct: 573 TTVRRKMKELGIRKFPGCSSIEVNGVLHEFMVGGPSHMEMDDIHSVL 619
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 200/452 (44%), Gaps = 70/452 (15%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT-LKLSNLTYARFIFDHLTTPNT 77
+L+ C + HL Q+ + + +G K+V FCT ++ YA + + +P
Sbjct: 22 LLQSCESMAHLTQIHAKIFRVGLQDNMDTLTKIVLFCTDPSRGSIRYAERVLGFVQSPCL 81
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+Y MI A A + + L+ ++ ++G P+ F P V K+ + + + VH
Sbjct: 82 VMYNLMIKAVA-KDENFRKVLVLFSELRKQGL-NPDNFTLPPVFKAMGCLGKVVEGEKVH 139
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
+VKSGF+ + NS ++ Y +G +
Sbjct: 140 GYVVKSGFD------ACVCNS----------------------------VMGMYGALGKM 165
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
+ A +FD +P+RDV +WN +I+ + F DAI+ FRRM E N++ ++ T+V L
Sbjct: 166 EVAKKVFDEIPERDVVSWNVLISSYVGHRKFEDAIAVFRRMRRE--SNLKADEATVVSTL 223
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
SA ++G+ IH YV L++ + I NAL+DMY KCG + +AR FD K +
Sbjct: 224 SACSVLRNQEVGEEIHRYVDAE-LEMTTKIGNALLDMYCKCGCVDKARAIFDEMGNKNVI 282
Query: 318 SWNSMINSFALHGQSENSICVFEE----------------------------MMRCQDHN 349
W SM++ +A +G + + +FE + Q
Sbjct: 283 CWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALKLFRKMQIQR 342
Query: 350 IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEA 409
+RPD ++LL C G +EQG+ + + ++ LVD+ + G E+A
Sbjct: 343 LRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVGTA-LVDVYAKCGCVEKA 401
Query: 410 LEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
LEV MK E D W S++ G + G T A
Sbjct: 402 LEVFYEMK-ERDTASWTSVIYGLAVNGMTSKA 432
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 138/289 (47%), Gaps = 16/289 (5%)
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
G I+ A + + + +N +I ++ F + F + + + P+ TL
Sbjct: 64 GSIRYAERVLGFVQSPCLVMYNLMIKAVAKDENFRKVLVLFSELRKQ---GLNPDNFTLP 120
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
A+G G + G+ +HGYV ++G D + + N+++ MYG G ++ A++ FD ++
Sbjct: 121 PVFKAMGCLGKVVEGEKVHGYVVKSGFD--ACVCNSVMGMYGALGKMEVAKKVFDEIPER 178
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ SWN +I+S+ H + E++I VF M R + N++ D T +S L+AC+ E G
Sbjct: 179 DVVSWNVLISSYVGHRKFEDAIAVFRRMRR--ESNLKADEATVVSTLSACSVLRNQEVGE 236
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
+ + + +I + L+D+ + G ++A + M + + W S+++G
Sbjct: 237 EIHRYVDAELEMTTKIGN--ALLDMYCKCGCVDKARAIFDEMG-NKNVICWTSMVSGYAS 293
Query: 435 YGRTDFAEFAVKKLIEIDP-NNGGYGIMLANIYGELGKWDEVRKV-RKM 481
G D A ++L E P + + N Y + +DE K+ RKM
Sbjct: 294 NGSLDEA----RELFERSPVRDIVLWTAMINGYVQFNLFDEALKLFRKM 338
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,056,210,996
Number of Sequences: 23463169
Number of extensions: 331342187
Number of successful extensions: 888253
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6740
Number of HSP's successfully gapped in prelim test: 4266
Number of HSP's that attempted gapping in prelim test: 745985
Number of HSP's gapped (non-prelim): 46512
length of query: 529
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 382
effective length of database: 8,910,109,524
effective search space: 3403661838168
effective search space used: 3403661838168
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)