BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009663
(529 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C501|PPR70_ARATH Pentatricopeptide repeat-containing protein At1g33350
OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1
Length = 538
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/520 (60%), Positives = 403/520 (77%), Gaps = 3/520 (0%)
Query: 10 QTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIF 69
Q LNQ + A++ + H+NHLKQ+QSF+ G S ++F FKL+RFCTL+L NL+YARFIF
Sbjct: 21 QLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIF 80
Query: 70 DHLTTPNTYLYTAMITAYASQ-PAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
D + PNT+LY A++TAY+S P HASSAFS +R MV R P+PN FIYP VLKS P +
Sbjct: 81 DRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLS 140
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ T +VHT + KSGF Y VV+TAL++SY+ S + I +AR+LFDEMS+RNVVSWTAM+
Sbjct: 141 SAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAML 200
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
SGY R GDI NA +LF+ MP+RDVP+WN+++A CTQNGLF +A+S FRRM E S IRP
Sbjct: 201 SGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPS--IRP 258
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
N+VT+VC LSA TG LQL K IH + YR L D F+SN+L+D+YGKCG+L+EA F
Sbjct: 259 NEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVF 318
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
SKK LT+WNSMIN FALHG+SE +I VFEEMM+ ++I+PD +TFI LLNACTHGG
Sbjct: 319 KMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGG 378
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSL 428
LV +GR YF LMT + IEP+IEHYGCL+DLLGRAGRF+EALEV+ MK++ DE +WGSL
Sbjct: 379 LVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSL 438
Query: 429 LNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAY 488
LN CKI+G D AE AVK L+ ++PNNGGY M+AN+YGE+G W+E R+ RKM+K +NAY
Sbjct: 439 LNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAY 498
Query: 489 KTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
K PG S IE+D +VHQF+SLDK+HP TEEIY L+S+++
Sbjct: 499 KPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLISF 538
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/507 (37%), Positives = 313/507 (61%), Gaps = 9/507 (1%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPN 76
+ L+R N K++ + + G SQ++F K+V FC K+ ++ YA +F+ ++ PN
Sbjct: 14 IPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCD-KIEDMDYATRLFNQVSNPN 72
Query: 77 TYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMV 136
+LY ++I AY + +Y+ ++R+ P++F +P + KSC + K V
Sbjct: 73 VFLYNSIIRAYTHNSLYCD-VIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQV 131
Query: 137 HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGD 196
H + K G + V E AL++ Y + +D+ A K+FDEM +R+V+SW +++SGY R+G
Sbjct: 132 HGHLCKFGPRFHVVTENALIDMYMKF-DDLVDAHKVFDEMYERDVISWNSLLSGYARLGQ 190
Query: 197 IKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
+K A LF M D+ + +W ++I+G T G + +A+ FFR M + I P++++L+
Sbjct: 191 MKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLA---GIEPDEISLISV 247
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
L + G L+LGK IH Y R G + + NALI+MY KCG + +A + F + K +
Sbjct: 248 LPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 307
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAY 376
SW++MI+ +A HG + +I F EM R + ++P+G+TF+ LL+AC+H G+ ++G Y
Sbjct: 308 ISWSTMISGYAYHGNAHGAIETFNEMQRAK---VKPNGITFLGLLSACSHVGMWQEGLRY 364
Query: 377 FKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
F +M + Y+IEP+IEHYGCL+D+L RAG+ E A+E+ K M ++PD +WGSLL+ C+ G
Sbjct: 365 FDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPG 424
Query: 437 RTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWI 496
D A A+ L+E++P + G ++LANIY +LGKW++V ++RKM+++ N KTPG S I
Sbjct: 425 NLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLI 484
Query: 497 EVDKQVHQFHSLDKTHPRTEEIYDALE 523
EV+ V +F S D + P EI L+
Sbjct: 485 EVNNIVQEFVSGDNSKPFWTEISIVLQ 511
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/521 (37%), Positives = 304/521 (58%), Gaps = 14/521 (2%)
Query: 5 TNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTY 64
+N L + + ++++L C +I H+ + + + Q F F+L+R C+ L ++ Y
Sbjct: 21 SNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCS-TLDSVDY 79
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A +F +++ PN YLYTAMI + S ++ SLY M+ P+ ++ VLK+C
Sbjct: 80 AYDVFSYVSNPNVYLYTAMIDGFVSS-GRSADGVSLYHRMIH-NSVLPDNYVITSVLKAC 137
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ + + +H Q++K GF V ++ Y +SG + A+K+FDEM DR+ V+
Sbjct: 138 ----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVN-AKKMFDEMPDRDHVAA 192
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T MI+ Y+ G IK A LF + +D W ++I G +N + A+ FR M ME
Sbjct: 193 TVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME--- 249
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
N+ N+ T VC LSA G L+LG+ +H +V ++L +F+ NALI+MY +CG + EA
Sbjct: 250 NVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEA 309
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
RR F K + S+N+MI+ A+HG S +I F +M+ + RP+ VT ++LLNAC
Sbjct: 310 RRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMV---NRGFRPNQVTLVALLNAC 366
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+HGGL++ G F M + + +EPQIEHYGC+VDLLGR GR EEA ++ + IEPD ++
Sbjct: 367 SHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIM 426
Query: 425 WGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKD 484
G+LL+ CKI+G + E K+L E + + G ++L+N+Y GKW E ++R+ ++D
Sbjct: 427 LGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRD 486
Query: 485 RNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PGCS IEVD Q+H+F D HP E IY L+ +
Sbjct: 487 SGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527
>sp|Q9FNN7|PP371_ARATH Pentatricopeptide repeat-containing protein At5g08510
OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1
Length = 511
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/505 (38%), Positives = 304/505 (60%), Gaps = 21/505 (4%)
Query: 26 INHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMIT 85
+N +KQL + G +T +L L + NL YAR +FDH T+LY +I
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRL-----LLIPNLVYARKLFDHHQNSCTFLYNKLIQ 55
Query: 86 AY--ASQPAHASSAFSLYR-DMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVK 142
AY QP + ++L D +R P+ + + + +R +++H+Q +
Sbjct: 56 AYYVHHQPHESIVLYNLLSFDGLR-----PSHHTFNFIFAASASFSSARPLRLLHSQFFR 110
Query: 143 SGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAAS 202
SGFE T L+ +Y++ G + AR++FDEMS R+V W AMI+GY R GD+K A
Sbjct: 111 SGFESDSFCCTTLITAYAKLGA-LCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAME 169
Query: 203 LFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGH 262
LFDSMP ++V +W +VI+G +QNG +S+A+ F + ME +++PN +T+V L A +
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMF--LCMEKDKSVKPNHITVVSVLPACAN 227
Query: 263 TGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR-LTSWNS 321
G L++G+ + GY NG + ++ NA I+MY KCG + A+R F+ +R L SWNS
Sbjct: 228 LGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNS 287
Query: 322 MINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMT 381
MI S A HG+ + ++ +F +M+R +PD VTF+ LL AC HGG+V +G+ FK M
Sbjct: 288 MIGSLATHGKHDEALTLFAQMLR---EGEKPDAVTFVGLLLACVHGGMVVKGQELFKSME 344
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+ ++I P++EHYGC++DLLGR G+ +EA +++K M ++PD VVWG+LL C +G + A
Sbjct: 345 EVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
Query: 442 EFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSW-IEVDK 500
E A + L +++P N G ++++NIY KWD V ++RK++K K G S+ +EV
Sbjct: 405 EIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGV 464
Query: 501 QVHQFHSLDKTHPRTEEIYDALESM 525
VH+F DK+HPR+ EIY LE +
Sbjct: 465 DVHKFTVEDKSHPRSYEIYQVLEEI 489
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/521 (37%), Positives = 298/521 (57%), Gaps = 25/521 (4%)
Query: 20 LERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT---LKLSNLTYARFIFDHLTTPN 76
+ C I L Q+ + GQ + A +++RFC L +L YA IF+ + N
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 77 TYLYTAMITAYA-SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ + +I ++ S A A +L+ +M+ +PN+F +P VLK+C + + K
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE---------MSDR-----NV 181
+H +K GF V + LV Y G + AR LF + M+DR +
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGF-MKDARVLFYKNIIEKDMVVMTDRRKRDGEI 208
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
V W MI GY R+GD K A LFD M R V +WN++I+G + NG F DA+ FR M
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK-- 266
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+IRPN VTLV L AI G L+LG+ +H Y +G+ +D + +ALIDMY KCG +
Sbjct: 267 -KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGII 325
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
++A F+R ++ + +W++MIN FA+HGQ+ ++I F +M + +RP V +I+LL
Sbjct: 326 EKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM---RQAGVRPSDVAYINLL 382
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
AC+HGGLVE+GR YF M +EP+IEHYGC+VDLLGR+G +EA E + M I+PD
Sbjct: 383 TACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPD 442
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
+V+W +LL C++ G + + L+++ P++ G + L+N+Y G W EV ++R
Sbjct: 443 DVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLR 502
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
+K+++ K PGCS I++D +H+F D +HP+ +EI L
Sbjct: 503 MKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSML 543
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 356 bits (913), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 194/522 (37%), Positives = 304/522 (58%), Gaps = 13/522 (2%)
Query: 8 LNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARF 67
L+ LN V ++ N++ LKQ ++ G ++ N K + C+ +L YA
Sbjct: 10 LSSGLNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACS-NAGHLRYAYS 68
Query: 68 IFDHLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCP 125
+F H PNTYL+ MI A + +P S A ++YR + +P+ F +P VLK
Sbjct: 69 VFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALC-AKPDTFTFPFVLKIAV 127
Query: 126 DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWT 185
V + + +H Q+V GF+ V T L+ Y G +G ARK+FDEM ++V W
Sbjct: 128 RVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGG-LGDARKMFDEMLVKDVNVWN 186
Query: 186 AMISGYTRVGDIKNAASLFDSMP--DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
A+++GY +VG++ A SL + MP R+ +W VI+G ++G S+AI F+RM ME
Sbjct: 187 ALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLME-- 244
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
N+ P++VTL+ LSA G L+LG+ I YV G++ ++NA+IDMY K G++ +
Sbjct: 245 -NVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITK 303
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A F+ +++ + +W ++I A HG ++ +F M++ +RP+ VTFI++L+A
Sbjct: 304 ALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKA---GVRPNDVTFIAILSA 360
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C+H G V+ G+ F M Y I P IEHYGC++DLLGRAG+ EA EV+K M + +
Sbjct: 361 CSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAA 420
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+WGSLL ++ + E A+ +LI+++PNN G ++LAN+Y LG+WDE R +R M+K
Sbjct: 421 IWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMK 480
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K G S IEV+ +V++F S D THP+ E I++ L+ M
Sbjct: 481 GIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEM 522
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 352 bits (904), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 290/506 (57%), Gaps = 11/506 (2%)
Query: 15 QVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN--LTYARFIFDHL 72
+ ++ L+RC+ LKQ+ + + G Q ++ K + FC S+ L YA+ +FD
Sbjct: 16 ETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGF 75
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
P+T+L+ MI ++ S LY+ M+ P N + +P +LK+C ++
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLL-LYQRMLCSSAPH-NAYTFPSLLKACSNLSAFEE 133
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
T +H QI K G+E +L+NSY+ +GN +A LFD + + + VSW ++I GY
Sbjct: 134 TTQIHAQITKLGYENDVYAVNSLINSYAVTGN-FKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
+ G + A +LF M +++ +W ++I+G Q + +A+ F M + ++ P+ V+
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ---NSDVEPDNVS 249
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
L ALSA G L+ GK IH Y+ + + +DS + LIDMY KCG ++EA F
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
KK + +W ++I+ +A HG +I F EM Q I+P+ +TF ++L AC++ GLVE+
Sbjct: 310 KKSVQAWTALISGYAYHGHGREAISKFMEM---QKMGIKPNVITFTAVLTACSYTGLVEE 366
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G+ F M + Y ++P IEHYGC+VDLLGRAG +EA ++ M ++P+ V+WG+LL C
Sbjct: 367 GKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 426
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+I+ + E + LI IDP +GG + ANI+ KWD+ + R+++K++ K PG
Sbjct: 427 RIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPG 486
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEI 518
CS I ++ H+F + D++HP E+I
Sbjct: 487 CSTISLEGTTHEFLAGDRSHPEIEKI 512
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 180/548 (32%), Positives = 299/548 (54%), Gaps = 45/548 (8%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARFIFDHL 72
L++L C ++ L Q+ G +++ KL+ C + +S+ L YAR +
Sbjct: 6 HHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCF 65
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
P+ +++ ++ Y S+ ++ +++ +M+R+G P+ F + V+K+ + R
Sbjct: 66 PEPDAFMFNTLVRGY-SESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRT 124
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSG----------------------------- 163
+H Q +K G E + V T L+ Y G
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 164 -NDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC 222
ND+ AR++FD+M RN SW M++GY + G++++A +F MP RD +W+++I G
Sbjct: 185 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 244
Query: 223 TQNGLFSDAISFFR---RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN 279
NG F+++ +FR R GM PN+V+L LSA +G + GK++HG+V +
Sbjct: 245 AHNGSFNESFLYFRELQRAGMS------PNEVSLTGVLSACSQSGSFEFGKILHGFVEKA 298
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR-LTSWNSMINSFALHGQSENSICV 338
G ++NALIDMY +CG++ AR F+ +KR + SW SMI A+HGQ E ++ +
Sbjct: 299 GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRL 358
Query: 339 FEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVD 398
F EM + + PDG++FISLL+AC+H GL+E+G YF M + Y IEP+IEHYGC+VD
Sbjct: 359 FNEM---TAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 415
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGY 458
L GR+G+ ++A + + M I P +VW +LL C +G + AE ++L E+DPNN G
Sbjct: 416 LYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGD 475
Query: 459 GIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
++L+N Y GKW +V +RK + + KT S +EV K +++F + +K E
Sbjct: 476 LVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEA 535
Query: 519 YDALESMV 526
++ L+ ++
Sbjct: 536 HEKLKEII 543
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 347 bits (889), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 175/458 (38%), Positives = 282/458 (61%), Gaps = 11/458 (2%)
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+F P+ +L+TA I AS AF LY ++ + PN+F + +LKSC
Sbjct: 86 LFHQTIDPDLFLFTAAINT-ASINGLKDQAFLLYVQLLS-SEINPNEFTFSSLLKSC--- 140
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
++ K++HT ++K G P V T LV+ Y++ G D+ A+K+FD M +R++VS TAM
Sbjct: 141 -STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAK-GGDVVSAQKVFDRMPERSLVSSTAM 198
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I+ Y + G+++ A +LFDSM +RD+ +WN +I G Q+G +DA+ F+++ E +
Sbjct: 199 ITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE--GKPK 256
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P+++T+V ALSA G L+ G+ IH +V + + L+ + LIDMY KCGSL+EA
Sbjct: 257 PDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLV 316
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F+ +K + +WN+MI +A+HG S++++ +F EM ++P +TFI L AC H
Sbjct: 317 FNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGIT--GLQPTDITFIGTLQACAHA 374
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
GLV +G F+ M + Y I+P+IEHYGCLV LLGRAG+ + A E +K M ++ D V+W S
Sbjct: 375 GLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSS 434
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
+L CK++G + + LI ++ N G ++L+NIY +G ++ V KVR ++K++
Sbjct: 435 VLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGI 494
Query: 488 YKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PG S IE++ +VH+F + D+ H +++EIY L +
Sbjct: 495 VKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKI 532
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 133/278 (47%), Gaps = 42/278 (15%)
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
Y G I+++ +LF D D+ + + I + NGL A + ++ +S I PN
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQL---LSSEINPN 129
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
+ T S++ + + GK+IH +V + GL +D +++ L+D+Y K G + A++ FD
Sbjct: 130 EFT----FSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFD 185
Query: 310 RNSKKRL-------------------------------TSWNSMINSFALHGQSENSICV 338
R ++ L SWN MI+ +A HG +++ +
Sbjct: 186 RMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALML 245
Query: 339 FEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVD 398
F++++ + +PD +T ++ L+AC+ G +E GR + + K+ RI ++ L+D
Sbjct: 246 FQKLL--AEGKPKPDEITVVAALSACSQIGALETGR-WIHVFVKSSRIRLNVKVCTGLID 302
Query: 399 LLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
+ + G EEA+ V D V W +++ G ++G
Sbjct: 303 MYSKCGSLEEAVLVFNDTP-RKDIVAWNAMIAGYAMHG 339
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 17/250 (6%)
Query: 55 CTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQ 114
C K N+ AR +FD + + + MI YA Q + A L++ ++ G+P+P++
Sbjct: 201 CYAKQGNVEAARALFDSMCERDIVSWNVMIDGYA-QHGFPNDALMLFQKLLAEGKPKPDE 259
Query: 115 FIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
L +C + + +H + S V T L++ YS+ G+ + A +F+
Sbjct: 260 ITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS-LEEAVLVFN 318
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSM------PDRDVPAWNSVIAGCTQNGLF 228
+ +++V+W AMI+GY G ++A LF+ M D+ + + C GL
Sbjct: 319 DTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDI-TFIGTLQACAHAGLV 377
Query: 229 SDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFIS 288
++ I F MG E I+P C +S +G G L K + + +D DS +
Sbjct: 378 NEGIRIFESMGQEY--GIKPKIEHYGCLVSLLGRAGQL---KRAYETIKNMNMDADSVLW 432
Query: 289 NALIDMYGKC 298
++++ G C
Sbjct: 433 SSVL---GSC 439
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 336 bits (862), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/503 (34%), Positives = 285/503 (56%), Gaps = 9/503 (1%)
Query: 22 RCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYT 81
+C+ + LKQ+ + L G A +++ FC S++ YA +F + N +++
Sbjct: 34 QCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWN 93
Query: 82 AMITAYASQPAHASSAFSLYRDMV-RRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQI 140
+I + S+ + A S++ DM+ +P + YP V K+ + ++R + +H +
Sbjct: 94 TIIRGF-SRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV 152
Query: 141 VKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
+K G E + +++ Y G I A ++F M +VV+W +MI G+ + G I A
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLIE-AWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQA 211
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
+LFD MP R+ +WNS+I+G +NG F DA+ FR M +++P+ T+V L+A
Sbjct: 212 QNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ---EKDVKPDGFTMVSLLNAC 268
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
+ G + G+ IH Y+ RN +L+S + ALIDMY KCG ++E F+ KK+L+ WN
Sbjct: 269 AYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWN 328
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
SMI A +G E ++ +F E+ R + PD V+FI +L AC H G V + +F+LM
Sbjct: 329 SMILGLANNGFEERAMDLFSELER---SGLEPDSVSFIGVLTACAHSGEVHRADEFFRLM 385
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+ Y IEP I+HY +V++LG AG EEA ++K M +E D V+W SLL+ C+ G +
Sbjct: 386 KEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEM 445
Query: 441 AEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDK 500
A+ A K L ++DP+ ++L+N Y G ++E + R ++K+R K GCS IEVD
Sbjct: 446 AKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDF 505
Query: 501 QVHQFHSLDKTHPRTEEIYDALE 523
+VH+F S THP++ EIY L+
Sbjct: 506 EVHEFISCGGTHPKSAEIYSLLD 528
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 332 bits (852), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 177/472 (37%), Positives = 269/472 (56%), Gaps = 11/472 (2%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+++ + A F+ + + + +MI+ + +Q + A ++ M+R P++F
Sbjct: 223 MQVGQMDLAMAQFEQMAERDIVTWNSMISGF-NQRGYDLRALDIFSKMLRDSLLSPDRFT 281
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE- 175
VL +C ++ + K +H+ IV +GF+ +V AL++ YSR G + AR+L ++
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG-VETARRLIEQR 340
Query: 176 -MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
D + +TA++ GY ++GD+ A ++F S+ DRDV AW ++I G Q+G + +AI+
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINL 400
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
FR M V RPN TL LS L GK IHG ++G +SNALI M
Sbjct: 401 FRSM---VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITM 457
Query: 295 YGKCGSLKEARRAFDRNSKKRLT-SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
Y K G++ A RAFD +R T SW SMI + A HG +E ++ +FE M+ +RPD
Sbjct: 458 YAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM---EGLRPD 514
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
+T++ + +ACTH GLV QGR YF +M +I P + HY C+VDL GRAG +EA E +
Sbjct: 515 HITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
+ M IEPD V WGSLL+ C+++ D + A ++L+ ++P N G LAN+Y GKW+
Sbjct: 575 EKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWE 634
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
E K+RK +KD K G SWIEV +VH F D THP EIY ++ +
Sbjct: 635 EAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKI 686
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 187/388 (48%), Gaps = 43/388 (11%)
Query: 120 VLKSCPDVLESRGTK--------MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARK 171
+L+ C ++L+ K +VH +++KSG + L+N YS++G + ARK
Sbjct: 12 LLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALH-ARK 70
Query: 172 LFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDA 231
LFDEM R SW ++S Y++ GD+ + FD +P RD +W ++I G G + A
Sbjct: 71 LFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKA 130
Query: 232 ISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNAL 291
I R MG V + I P Q TL L+++ T ++ GK +H ++ + GL + +SN+L
Sbjct: 131 I---RVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSL 187
Query: 292 IDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH---GQSENSICVFEEMMRCQDH 348
++MY KCG A+ FDR + ++SWN+MI ALH GQ + ++ FE+M
Sbjct: 188 LNMYAKCGDPMMAKFVFDRMVVRDISSWNAMI---ALHMQVGQMDLAMAQFEQMA----- 239
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEE 408
D VT+ S+++ G + F M + + P L +L E
Sbjct: 240 --ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPD---RFTLASVLSACANLE- 293
Query: 409 ALEVVKGMKIEPDEVVWGSLLNG------CKIYGRTDFAEFAVKKLIE----IDPNNGGY 458
++ G +I V G ++G +Y R E A ++LIE D G+
Sbjct: 294 --KLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETA-RRLIEQRGTKDLKIEGF 350
Query: 459 GIMLANIYGELGKWDEVRKVRKMLKDRN 486
+L Y +LG ++ + + LKDR+
Sbjct: 351 TALLDG-YIKLGDMNQAKNIFVSLKDRD 377
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 330 bits (846), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/473 (36%), Positives = 283/473 (59%), Gaps = 14/473 (2%)
Query: 62 LTYARFIFD--HLTTPNTYLYTAMITAYA---SQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+ YA IF HL ++L+ +I A S P S S+Y M R + P+
Sbjct: 8 IAYANPIFHIRHLKL-ESFLWNIIIRAIVHNVSSP-QRHSPISVYLRM-RNHRVSPDFHT 64
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+P +L S + L + H QI+ G ++ P V T+L+N YS G D+ A+++FD+
Sbjct: 65 FPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCG-DLRSAQRVFDDS 123
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+++ +W ++++ Y + G I +A LFD MP+R+V +W+ +I G G + +A+ FR
Sbjct: 124 GSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFR 183
Query: 237 RMGMEVSDN--IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
M + + +RPN+ T+ LSA G G L+ GK +H Y+ + +++D + ALIDM
Sbjct: 184 EMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDM 243
Query: 295 YGKCGSLKEARRAFDR-NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
Y KCGSL+ A+R F+ SKK + ++++MI A++G ++ +F EM NI P+
Sbjct: 244 YAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMT--TSDNINPN 301
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV 413
VTF+ +L AC H GL+ +G++YFK+M + + I P I+HYGC+VDL GR+G +EA +
Sbjct: 302 SVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFI 361
Query: 414 KGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWD 473
M +EPD ++WGSLL+G ++ G E A+K+LIE+DP N G ++L+N+Y + G+W
Sbjct: 362 ASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWM 421
Query: 474 EVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
EV+ +R ++ + K PGCS++EV+ VH+F D++ +E IY L+ ++
Sbjct: 422 EVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIM 474
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 328 bits (842), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 302/528 (57%), Gaps = 15/528 (2%)
Query: 4 VTNQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT-LKLSNL 62
++NQ + L +++ L+ C ++N +KQ+ + G Q+ + KL+R T L +
Sbjct: 41 ISNQ-KELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMD 99
Query: 63 TYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
YAR + + + N +L+TA+I YA + A ++Y M R+ + P F + +LK
Sbjct: 100 PYARRVIEPVQFRNPFLWTAVIRGYAIE-GKFDEAIAMYGCM-RKEEITPVSFTFSALLK 157
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
+C + + + H Q + + V +++ Y + I ARK+FDEM +R+V+
Sbjct: 158 ACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKC-ESIDCARKVFDEMPERDVI 216
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
SWT +I+ Y RVG+++ AA LF+S+P +D+ AW +++ G QN +A+ +F RM
Sbjct: 217 SWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRME--- 273
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS--FISNALIDMYGKCGS 300
IR ++VT+ +SA G + ++G I +ALIDMY KCG+
Sbjct: 274 KSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGN 333
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
++EA F + K + +++SMI A HG+++ ++ +F M+ I+P+ VTF+
Sbjct: 334 VEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMV--TQTEIKPNTVTFVGA 391
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L AC+H GLV+QGR F M +T+ ++P +HY C+VDLLGR GR +EALE++K M +EP
Sbjct: 392 LMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEP 451
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
VWG+LL C+I+ + AE A + L E++P+ G I+L+N+Y G W V +VRK
Sbjct: 452 HGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRK 511
Query: 481 MLKDRNAYKTPGCSWIEVDK--QVHQFHSLDKTHPRTEEIYDALESMV 526
++K++ KTP SW+ VDK Q+H+F + HP + +I D LE +V
Sbjct: 512 LIKEKGLKKTPAVSWV-VDKNGQMHKFFPGNLNHPMSNKIQDKLEELV 558
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/465 (35%), Positives = 266/465 (57%), Gaps = 9/465 (1%)
Query: 61 NLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHV 120
++ AR +FD + + +I Y + A A +Y+ M G +P+ +
Sbjct: 206 DMENARKVFDESPVRDLVSWNCLINGY-KKIGEAEKAIYVYKLMESEG-VKPDDVTMIGL 263
Query: 121 LKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRN 180
+ SC + + K + + ++G + AL++ +S+ G DI AR++FD + R
Sbjct: 264 VSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCG-DIHEARRIFDNLEKRT 322
Query: 181 VVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGM 240
+VSWT MISGY R G + + LFD M ++DV WN++I G Q DA++ F+ M
Sbjct: 323 IVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQ- 381
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ N +P+++T++ LSA G L +G IH Y+ + L L+ + +L+DMY KCG+
Sbjct: 382 --TSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGN 439
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+ EA F + ++ ++I ALHG + +I F EM+ D I PD +TFI L
Sbjct: 440 ISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMI---DAGIAPDEITFIGL 496
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC HGG+++ GR YF M + + PQ++HY +VDLLGRAG EEA +++ M +E
Sbjct: 497 LSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEA 556
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
D VWG+LL GC+++G + E A KKL+E+DP++ G ++L +YGE W++ ++ R+
Sbjct: 557 DAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARR 616
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
M+ +R K PGCS IEV+ V +F DK+ P +E+IYD L +
Sbjct: 617 MMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCL 661
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/494 (26%), Positives = 232/494 (46%), Gaps = 78/494 (15%)
Query: 11 TLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARFIF 69
L+ +L++LE+C + HLKQ+Q+ + G F + +L+ FC L S L Y+ I
Sbjct: 51 VLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKIL 110
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRG--QPQPNQFIYPHVLKSCPDV 127
+ PN + + I + S+ + +F LY+ M+R G + +P+ F YP + K C D+
Sbjct: 111 KGIENPNIFSWNVTIRGF-SESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADL 169
Query: 128 LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
S M+ ++K E V A ++ ++ G D+ ARK+FDE R++VSW +
Sbjct: 170 RLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCG-DMENARKVFDESPVRDLVSWNCL 228
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I+GY ++G+ + A ++ M S+ ++
Sbjct: 229 INGYKKIGEAEKAIYVYKLME----------------------------------SEGVK 254
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P+ VT++ +S+ G L GK + YV NGL + + NAL+DM+ KCG + EARR
Sbjct: 255 PDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRI 314
Query: 308 FDRNSKKRLTSWNSMINSFALHG-------------------------------QSENSI 336
FD K+ + SW +MI+ +A G + ++++
Sbjct: 315 FDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDAL 374
Query: 337 CVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCL 396
+F+EM Q N +PD +T I L+AC+ G ++ G + + K Y + + L
Sbjct: 375 ALFQEM---QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSLSLNVALGTSL 430
Query: 397 VDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPN 454
VD+ + G EAL V G++ + + + +++ G ++G A ++I+ I P+
Sbjct: 431 VDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPD 489
Query: 455 NGGY-GIMLANIYG 467
+ G++ A +G
Sbjct: 490 EITFIGLLSACCHG 503
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 327 bits (838), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/496 (35%), Positives = 282/496 (56%), Gaps = 10/496 (2%)
Query: 30 KQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYAS 89
K+L + G + LV+ +L + AR +FD + + + MI+ Y
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSL-CGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 90 QPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
+ S L +M R P VL +C V + K VH + + E
Sbjct: 214 MKEYEES-IELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSL 271
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
+E ALVN+Y+ G ++ IA ++F M R+V+SWT+++ GY G++K A + FD MP
Sbjct: 272 RLENALVNAYAACG-EMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPV 330
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
RD +W +I G + G F++++ FR M S + P++ T+V L+A H G L++G
Sbjct: 331 RDRISWTIMIDGYLRAGCFNESLEIFREMQ---SAGMIPDEFTMVSVLTACAHLGSLEIG 387
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
+ I Y+ +N + D + NALIDMY KCG ++A++ F ++ +W +M+ A +
Sbjct: 388 EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANN 447
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
GQ + +I VF +M QD +I+PD +T++ +L+AC H G+V+Q R +F M +RIEP
Sbjct: 448 GQGQEAIKVFFQM---QDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPS 504
Query: 390 IEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLI 449
+ HYGC+VD+LGRAG +EA E+++ M + P+ +VWG+LL +++ AE A KK++
Sbjct: 505 LVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKIL 564
Query: 450 EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLD 509
E++P+NG +L NIY +W ++R+VR+ + D KTPG S IEV+ H+F + D
Sbjct: 565 ELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGD 624
Query: 510 KTHPRTEEIYDALESM 525
K+H ++EEIY LE +
Sbjct: 625 KSHLQSEEIYMKLEEL 640
Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 122/251 (48%), Gaps = 14/251 (5%)
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
V W + + G+ + A LF +P+ DV WN++I G ++ + + + M
Sbjct: 74 VFWCSRLGGH-----VSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNM--- 125
Query: 242 VSDNIRPNQVTLVCALSAIGHTG-MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
+ + + P+ T L+ + G L GK +H +V + GL + ++ NAL+ MY CG
Sbjct: 126 LKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGL 185
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
+ AR FDR K+ + SWN MI+ + + E SI + EM R + + P VT + +
Sbjct: 186 MDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMER---NLVSPTSVTLLLV 242
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC+ + + + +++ + EP + LV+ G + A+ + + MK
Sbjct: 243 LSACSKVKDKDLCKRVHEYVSEC-KTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR- 300
Query: 421 DEVVWGSLLNG 431
D + W S++ G
Sbjct: 301 DVISWTSIVKG 311
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 325 bits (833), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 174/518 (33%), Positives = 293/518 (56%), Gaps = 16/518 (3%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCT-----LKLSNLT-YARFIFD 70
LA+L+ C+ + LK + FL F A +L+ C K +NL YA IF
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ PN +++ +I + S A S AF Y M++ + P+ +P ++K+ ++
Sbjct: 76 QIQNPNLFVFNLLIRCF-STGAEPSKAFGFYTQMLK-SRIWPDNITFPFLIKASSEMECV 133
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
+ H+QIV+ GF+ VE +LV+ Y+ G I A ++F +M R+VVSWT+M++G
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGF-IAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
Y + G ++NA +FD MP R++ W+ +I G +N F AI F M E + N+
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKRE---GVVANE 249
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
+V +S+ H G L+ G+ + YV ++ + ++ + AL+DM+ +CG +++A F+
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
+ SW+S+I A+HG + ++ F +M+ P VTF ++L+AC+HGGLV
Sbjct: 310 LPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISL---GFIPRDVTFTAVLSACSHGGLV 366
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
E+G ++ M K + IEP++EHYGC+VD+LGRAG+ EA + M ++P+ + G+LL
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLG 426
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
CKIY T+ AE LI++ P + GY ++L+NIY G+WD++ +R M+K++ K
Sbjct: 427 ACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKP 486
Query: 491 PGCSWIEVDKQVHQF-HSLDKTHPRTEEIYDALESMVA 527
PG S IE+D ++++F D+ HP +I E ++
Sbjct: 487 PGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILG 524
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/527 (33%), Positives = 291/527 (55%), Gaps = 17/527 (3%)
Query: 8 LNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARF 67
LN+ VL+ N +N Q+ S + + LV + K N+ A+
Sbjct: 150 LNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYS-KCGNVNDAQR 208
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + N + ++IT + Q A A +++ M+ + +P++ V+ +C +
Sbjct: 209 VFDEMGDRNVVSWNSLITCF-EQNGPAVEALDVFQ-MMLESRVEPDEVTLASVISACASL 266
Query: 128 LESRGTKMVHTQIVKSG-FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
+ + VH ++VK+ ++ A V+ Y++ I AR +FD M RNV++ T+
Sbjct: 267 SAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR-IKEARFIFDSMPIRNVIAETS 325
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
MISGY K A +F M +R+V +WN++IAG TQNG +A+S F + E ++
Sbjct: 326 MISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE---SV 382
Query: 247 RPNQVTLVCALSAIGHTGMLQLGK------VIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
P + L A L LG + HG+ +++G + D F+ N+LIDMY KCG
Sbjct: 383 CPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGC 442
Query: 301 LKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISL 360
++E F + ++ SWN+MI FA +G ++ +F EM+ + +PD +T I +
Sbjct: 443 VEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE---KPDHITMIGV 499
Query: 361 LNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEP 420
L+AC H G VE+GR YF MT+ + + P +HY C+VDLLGRAG EEA +++ M ++P
Sbjct: 500 LSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQP 559
Query: 421 DEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRK 480
D V+WGSLL CK++ ++ +KL+E++P+N G ++L+N+Y ELGKW++V VRK
Sbjct: 560 DSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRK 619
Query: 481 MLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
++ K PGCSWI++ H F DK+HPR ++I+ L+ ++A
Sbjct: 620 SMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIA 666
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 174/335 (51%), Gaps = 9/335 (2%)
Query: 117 YPHVLKSC-PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE 175
+ +L SC L + + VH ++KSGF ++ L+++YS+ G+ + R++FD+
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGS-LEDGRQVFDK 80
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
M RN+ +W ++++G T++G + A SLF SMP+RD WNS+++G Q+ +A+ +F
Sbjct: 81 MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 236 RRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
M E N+ + LSA + G +H + ++ D +I +AL+DMY
Sbjct: 141 AMMHKE---GFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
KCG++ +A+R FD + + SWNS+I F +G + ++ VF+ M+ + + PD V
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML---ESRVEPDEV 254
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
T S+++AC ++ G+ + K ++ I VD+ + R +EA +
Sbjct: 255 TLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS 314
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE 450
M I + + S+++G + T A K+ E
Sbjct: 315 MPIR-NVIAETSMISGYAMAASTKAARLMFTKMAE 348
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 287/528 (54%), Gaps = 46/528 (8%)
Query: 2 VSVTNQLNQTLNQQVLAILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLK 58
+ V +Q + Q ++ C H + L ++ + G Q F A KL+ +
Sbjct: 66 IRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYS-D 124
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L ++ YAR +FD Y++ A+ A + H LY M R G + ++F Y
Sbjct: 125 LGSVDYARKVFDKTRKRTIYVWNALFRAL-TLAGHGEEVLGLYWKMNRIGV-ESDRFTYT 182
Query: 119 HVLKSCP----DVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
+VLK+C V K +H + + G+ + + T LV+ Y+R
Sbjct: 183 YVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYAR------------- 229
Query: 175 EMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF 234
G + A+ +F MP R+V +W+++IA +NG +A+
Sbjct: 230 -------------------FGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRT 270
Query: 235 FRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
FR M E D+ PN VT+V L A L+ GK+IHGY+ R GLD + +AL+ M
Sbjct: 271 FREMMRETKDS-SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTM 329
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
YG+CG L+ +R FDR + + SWNS+I+S+ +HG + +I +FEEM+ + P
Sbjct: 330 YGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEML---ANGASPTP 386
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
VTF+S+L AC+H GLVE+G+ F+ M + + I+PQIEHY C+VDLLGRA R +EA ++V+
Sbjct: 387 VTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ 446
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
M+ EP VWGSLL C+I+G + AE A ++L ++P N G ++LA+IY E WDE
Sbjct: 447 DMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDE 506
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDAL 522
V++V+K+L+ R K PG W+EV ++++ F S+D+ +P E+I+ L
Sbjct: 507 VKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFL 554
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 18/219 (8%)
Query: 216 NSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGY 275
N +I + G AI R + E S P+Q T + GH L +H +
Sbjct: 50 NQLIQSLCKEGKLKQAI---RVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 276 VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
+ NG D D F++ LI MY GS+ AR+ FD+ K+ + WN++ + L G E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNA-----CTHGGLVEQGRAYFKLMTKTYRIEPQI 390
+ ++ +M R + D T+ +L A CT L++ + L + Y I
Sbjct: 163 LGLYWKMNRI---GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYI 219
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLL 429
LVD+ R G + A V GM + + V W +++
Sbjct: 220 --MTTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMI 255
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 323 bits (829), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 278/481 (57%), Gaps = 9/481 (1%)
Query: 46 FYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMV 105
F A L+ C +L A +F + + + +MI + Q A L++ M
Sbjct: 167 FVANSLIH-CYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFV-QKGSPDKALELFKKM- 223
Query: 106 RRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGND 165
+ + VL +C + + V + I ++ + A+++ Y++ G+
Sbjct: 224 ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS- 282
Query: 166 IGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQN 225
I A++LFD M +++ V+WT M+ GY D + A + +SMP +D+ AWN++I+ QN
Sbjct: 283 IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQN 342
Query: 226 GLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS 285
G ++A+ F + ++ N++ NQ+TLV LSA G L+LG+ IH Y+ ++G+ ++
Sbjct: 343 GKPNEALIVFHEL--QLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNF 400
Query: 286 FISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRC 345
+++ALI MY KCG L+++R F+ K+ + W++MI A+HG ++ +F +M
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM--- 457
Query: 346 QDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGR 405
Q+ N++P+GVTF ++ AC+H GLV++ + F M Y I P+ +HY C+VD+LGR+G
Sbjct: 458 QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGY 517
Query: 406 FEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANI 465
E+A++ ++ M I P VWG+LL CKI+ + AE A +L+E++P N G ++L+NI
Sbjct: 518 LEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNI 577
Query: 466 YGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
Y +LGKW+ V ++RK ++ K PGCS IE+D +H+F S D HP +E++Y L +
Sbjct: 578 YAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEV 637
Query: 526 V 526
+
Sbjct: 638 M 638
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 223/484 (46%), Gaps = 78/484 (16%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTP 75
++++ERC + LKQ + G + A KL L ++L YAR +FD + P
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
N++ + +I AYAS P S ++ + DMV Q PN++ +P ++K+ +V +
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWA-FLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+H VKS V +L++ Y G D+ A K+F + +++VVSW +MI+G+ + G
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCG-DLDSACKVFTTIKEKDVVSWNSMINGFVQKG 211
Query: 196 DIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVC 255
A LF M DV A + VT+V
Sbjct: 212 SPDKALELFKKMESEDVKA----------------------------------SHVTMVG 237
Query: 256 ALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR----- 310
LSA L+ G+ + Y+ N ++++ ++NA++DMY KCGS+++A+R FD
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 311 ------------------------NS--KKRLTSWNSMINSFALHGQSENSICVFEEMMR 344
NS +K + +WN++I+++ +G+ ++ VF E+
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 345 CQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAG 404
N++ + +T +S L+AC G +E GR + K + I L+ + + G
Sbjct: 358 --QKNMKLNQITLVSTLSACAQVGALELGR-WIHSYIKKHGIRMNFHVTSALIHMYSKCG 414
Query: 405 RFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGYGIML 462
E++ EV ++ + D VW +++ G ++G + A K+ E + PN G+
Sbjct: 415 DLEKSREVFNSVE-KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN----GVTF 469
Query: 463 ANIY 466
N++
Sbjct: 470 TNVF 473
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 281/521 (53%), Gaps = 57/521 (10%)
Query: 35 FLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHA 94
+LT F K++ C ++ ++ A +F + NT + +++ + P+
Sbjct: 51 YLTKPSDQDQIFPLNKIIARC-VRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRM 109
Query: 95 SSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETA 154
A L+ ++ P+P+ F Y +++ SC + V+ + +S F++ P + A
Sbjct: 110 MEAHQLFDEI-----PEPDTFSY-NIMLSC-------YVRNVNFEKAQSFFDRMPFKDAA 156
Query: 155 ----LVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR 210
++ Y+R G ++ AR+LF M ++N VSW AMISGY GD++ A+ F P R
Sbjct: 157 SWNTMITGYARRG-EMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVR 215
Query: 211 DVPAW--------------------------------NSVIAGCTQNGLFSDAISFFRRM 238
V AW N++I+G +N D + FR M
Sbjct: 216 GVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAM 275
Query: 239 GMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKC 298
+ + IRPN L AL LQLG+ IH V ++ L D +LI MY KC
Sbjct: 276 ---LEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKC 332
Query: 299 GSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFI 358
G L +A + F+ KK + +WN+MI+ +A HG ++ ++C+F EM+ D+ IRPD +TF+
Sbjct: 333 GELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMI---DNKIRPDWITFV 389
Query: 359 SLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKI 418
++L AC H GLV G AYF+ M + Y++EPQ +HY C+VDLLGRAG+ EEAL++++ M
Sbjct: 390 AVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPF 449
Query: 419 EPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
P V+G+LL C+++ + AEFA +KL++++ N + LANIY +W++V +V
Sbjct: 450 RPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARV 509
Query: 479 RKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
RK +K+ N K PG SWIE+ +VH F S D+ HP + I+
Sbjct: 510 RKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 322 bits (826), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 152/466 (32%), Positives = 280/466 (60%), Gaps = 9/466 (1%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
+ YAR +FD ++ + + MI Y + AF L+ +M + P++ I +++
Sbjct: 162 INYARNVFDEMSHRDVVTWNTMIERYC-RFGLVDEAFKLFEEM-KDSNVMPDEMILCNIV 219
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
+C R + ++ ++++ + TALV Y+ +G + +AR+ F +MS RN+
Sbjct: 220 SACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGC-MDMAREFFRKMSVRNL 278
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
TAM+SGY++ G + +A +FD +D+ W ++I+ ++ +A+ F M
Sbjct: 279 FVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM--- 335
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
I+P+ V++ +SA + G+L K +H ++ NGL+ + I+NALI+MY KCG L
Sbjct: 336 CCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGL 395
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
R F++ ++ + SW+SMIN+ ++HG++ +++ +F M + N+ P+ VTF+ +L
Sbjct: 396 DATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM---KQENVEPNEVTFVGVL 452
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
C+H GLVE+G+ F MT Y I P++EHYGC+VDL GRA EALEV++ M + +
Sbjct: 453 YGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASN 512
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
V+WGSL++ C+I+G + +FA K+++E++P++ G ++++NIY +W++VR +R++
Sbjct: 513 VVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRV 572
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
++++N +K G S I+ + + H+F DK H ++ EIY L+ +V+
Sbjct: 573 MEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVS 618
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 215/459 (46%), Gaps = 33/459 (7%)
Query: 8 LNQTLNQQVLAILERCNHINHLKQLQS-FLTTLGQSQTNFYAFKLVRFCTLKLSNLTYAR 66
+ T +L L C +NH+KQL + L T+ + N + F L + NL+YA
Sbjct: 7 IASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSV--SSSSINLSYAL 64
Query: 67 FIFDHL-TTPNTYLYTAMI--TAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
+F + + P + ++ + + +S+P A L+ +R + +QF + +LK+
Sbjct: 65 NVFSSIPSPPESIVFNPFLRDLSRSSEP----RATILFYQRIRHVGGRLDQFSFLPILKA 120
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
V +H K P VET ++ Y+ G I AR +FDEMS R+VV+
Sbjct: 121 VSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGR-INYARNVFDEMSHRDVVT 179
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPA----WNSVIAGC--TQNGLFSDAISFFRR 237
W MI Y R G + A LF+ M D +V ++++ C T N ++ AI F
Sbjct: 180 WNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL- 238
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
+ +++R + L ++ G + + + +R + F+S A++ Y K
Sbjct: 239 ----IENDVRMDTHLLTALVTMYAGAGCMDMAREF----FRKMSVRNLFVSTAMVSGYSK 290
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG L +A+ FD+ KK L W +MI+++ + ++ VFEEM C I+PD V+
Sbjct: 291 CGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC-CS--GIKPDVVSM 347
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
S+++AC + G++++ + + +E ++ L+++ + G + +V + M
Sbjct: 348 FSVISACANLGILDKAK-WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP 406
Query: 418 IEPDEVVWGSLLNGCKIYGRTD--FAEFAVKKLIEIDPN 454
+ V W S++N ++G + FA K ++PN
Sbjct: 407 -RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 322 bits (824), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 185/580 (31%), Positives = 308/580 (53%), Gaps = 78/580 (13%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL-KLSNLTYARFIFDHL 72
++ L L +C ++N +KQL + + + A KL+ +L + +NL A +F+ +
Sbjct: 20 EERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL--AVRVFNQV 77
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
PN +L ++I A+A Q + AF ++ +M R G N F YP +LK+C
Sbjct: 78 QEPNVHLCNSLIRAHA-QNSQPYQAFFVFSEMQRFGLFADN-FTYPFLLKACSGQSWLPV 135
Query: 133 TKMVHTQ----------------------------------------------------I 140
KM+H +
Sbjct: 136 VKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGL 195
Query: 141 VKSG--------FEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
VK+G F++ P + +++ Y+R ++ A +LF++M +RN VSW+ M+
Sbjct: 196 VKAGELRDARRLFDEMPQRDLISWNTMLDGYARC-REMSKAFELFEKMPERNTVSWSTMV 254
Query: 189 SGYTRVGDIKNAASLFDSMP--DRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
GY++ GD++ A +FD MP ++V W +IAG + GL +A +M V+ +
Sbjct: 255 MGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQM---VASGL 311
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
+ + ++ L+A +G+L LG IH + R+ L ++++ NAL+DMY KCG+LK+A
Sbjct: 312 KFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFD 371
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F+ KK L SWN+M++ +HG + +I +F M R IRPD VTFI++L +C H
Sbjct: 372 VFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRR---EGIRPDKVTFIAVLCSCNH 428
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GL+++G YF M K Y + PQ+EHYGCLVDLLGR GR +EA++VV+ M +EP+ V+WG
Sbjct: 429 AGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWG 488
Query: 427 SLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+LL C+++ D A+ + L+++DP + G +L+NIY W+ V +R +K
Sbjct: 489 ALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMG 548
Query: 487 AYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
K G S +E++ +H+F DK+HP++++IY L S++
Sbjct: 549 VEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLI 588
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 321 bits (823), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 296/523 (56%), Gaps = 51/523 (9%)
Query: 16 VLAILERC---------NHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN---LT 63
+L ++E+C + I L+Q+ +F G S ++ K + F + L + ++
Sbjct: 11 LLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMS 70
Query: 64 YARFIFDHLTTP-NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLK 122
YA +F + P N +++ +I YA + ++ SAFSLYR+M G +P+ YP ++K
Sbjct: 71 YAHKVFSKIEKPINVFIWNTLIRGYA-EIGNSISAFSLYREMRVSGLVEPDTHTYPFLIK 129
Query: 123 SCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVV 182
+ + + R + +H+ +++SGF V+ +L++ Y+ G
Sbjct: 130 AVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG------------------- 170
Query: 183 SWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEV 242
D+ +A +FD MP++D+ AWNSVI G +NG +A++ + M
Sbjct: 171 -------------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMN--- 214
Query: 243 SDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLK 302
S I+P+ T+V LSA G L LGK +H Y+ + GL + SN L+D+Y +CG ++
Sbjct: 215 SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVE 274
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
EA+ FD K SW S+I A++G + +I +F+ M + + P +TF+ +L
Sbjct: 275 EAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE--GLLPCEITFVGILY 332
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H G+V++G YF+ M + Y+IEP+IEH+GC+VDLL RAG+ ++A E +K M ++P+
Sbjct: 333 ACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 392
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
V+W +LL C ++G +D AEFA ++++++PN+ G ++L+N+Y +W +V+K+RK +
Sbjct: 393 VIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQM 452
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K PG S +EV +VH+F DK+HP+++ IY L+ M
Sbjct: 453 LRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 495
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 281/524 (53%), Gaps = 50/524 (9%)
Query: 13 NQQVLAILERCNHINHLKQLQSFL--TTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFD 70
+Q++ ++ E C+ ++ LKQL +F TT + + + + + S++ YA +FD
Sbjct: 48 HQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 107
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ +++++ +I A A + AF LYR M+ RG+ P++ +P VLK+C +
Sbjct: 108 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 167
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
K VH QIVK GF V L++ Y G + +ARK+FDE
Sbjct: 168 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC-LDLARKVFDE--------------- 211
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
MP+R + +WNS+I + G + A+ FR E+ + P+
Sbjct: 212 ----------------MPERSLVSWNSMIDALVRFGEYDSALQLFR----EMQRSFEPDG 251
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRN---GLDLDSFISNALIDMYGKCGSLKEARRA 307
T+ LSA G L LG H ++ R + +D + N+LI+MY KCGSL+ A +
Sbjct: 252 YTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQV 311
Query: 308 FDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHG 367
F K+ L SWN+MI FA HG++E ++ F+ M+ + N+RP+ VTF+ LL AC H
Sbjct: 312 FQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD-KRENVRPNSVTFVGLLIACNHR 370
Query: 368 GLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
G V +GR YF +M + Y IEP +EHYGC+VDL+ RAG EA+++V M ++PD V+W S
Sbjct: 371 GFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRS 430
Query: 428 LLNGCKIYGRT-DFAEFAVKKLIEIDPNN-------GGYGIMLANIYGELGKWDEVRKVR 479
LL+ C G + + +E + +I +N G ++L+ +Y +W++V VR
Sbjct: 431 LLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVR 490
Query: 480 KMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K++ + K PGCS IE++ H+F + D +HP+T++IY L+
Sbjct: 491 KLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLK 534
>sp|Q56X05|PPR15_ARATH Pentatricopeptide repeat-containing protein At1g06145
OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2
Length = 577
Score = 319 bits (818), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 174/532 (32%), Positives = 291/532 (54%), Gaps = 44/532 (8%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTY 78
I+++C+ L+ + + +Q + + CT L A + PN +
Sbjct: 34 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACT-SFKRLDLAVSTMTQMQEPNVF 92
Query: 79 LYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHT 138
+Y A+ + + +H + LY M+R P+ + Y ++K+ SR + +
Sbjct: 93 VYNALFKGFVT-CSHPIRSLELYVRMLR-DSVSPSSYTYSSLVKASS--FASRFGESLQA 148
Query: 139 QIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV---- 194
I K GF + ++T L++ YS +G I ARK+FDEM +R+ ++WT M+S Y RV
Sbjct: 149 HIWKFGFGFHVKIQTTLIDFYSATGR-IREARKVFDEMPERDDIAWTTMVSAYRRVLDMD 207
Query: 195 ---------------------------GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGL 227
G+++ A SLF+ MP +D+ +W ++I G +QN
Sbjct: 208 SANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKR 267
Query: 228 FSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFI 287
+ +AI+ F +M + + I P++VT+ +SA H G+L++GK +H Y +NG LD +I
Sbjct: 268 YREAIAVFYKM---MEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYI 324
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
+AL+DMY KCGSL+ A F KK L WNS+I A HG ++ ++ +F +M +
Sbjct: 325 GSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKM---EM 381
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE 407
+++P+ VTF+S+ ACTH GLV++GR ++ M Y I +EHYG +V L +AG
Sbjct: 382 ESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIY 441
Query: 408 EALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYG 467
EALE++ M+ EP+ V+WG+LL+GC+I+ AE A KL+ ++P N GY +L ++Y
Sbjct: 442 EALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYA 501
Query: 468 ELGKWDEVRKVRKMLKDRNAYKT-PGCSWIEVDKQVHQFHSLDKTHPRTEEI 518
E +W +V ++R +++ K PG S I +DK+ H F + DK+H ++E+
Sbjct: 502 EQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEV 553
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 319 bits (817), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 181/578 (31%), Positives = 298/578 (51%), Gaps = 83/578 (14%)
Query: 18 AILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNT 77
++++ H LKQ+ + L LG + F KL+ + ++T+AR +FD L P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH-ASSSFGDITFARQVFDDLPRPQI 84
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
+ + A+I Y S+ H A +Y +M + + P+ F +PH+LK+C + + + VH
Sbjct: 85 FPWNAIIRGY-SRNNHFQDALLMYSNM-QLARVSPDSFTFPHLLKACSGLSHLQMGRFVH 142
Query: 138 TQIVKSGF---------------------------EQYPVVE------TALVNSYSRSGN 164
Q+ + GF E P+ E TA+V++Y+++G
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202
Query: 165 DIGIARKLFDEMSDRNV-VSWTAMIS---------------------------------- 189
+ A ++F +M +V W A++S
Sbjct: 203 PME-ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 190 ----GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
Y + G + A LFD M ++ WN++I+G +NG +AI F M ++ +
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM---INKD 318
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
+RP+ +++ A+SA G L+ + ++ YV R+ D FIS+ALIDM+ KCGS++ AR
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
FDR + + W++MI + LHG++ +I ++ M R H P+ VTF+ LL AC
Sbjct: 379 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVH---PNDVTFLGLLMACN 435
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
H G+V +G +F M ++I PQ +HY C++DLLGRAG ++A EV+K M ++P VW
Sbjct: 436 HSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVW 494
Query: 426 GSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
G+LL+ CK + + E+A ++L IDP+N G+ + L+N+Y WD V +VR +K++
Sbjct: 495 GALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEK 554
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K GCSW+EV ++ F DK+HPR EEI +E
Sbjct: 555 GLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVE 592
>sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300
OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2
Length = 548
Score = 316 bits (809), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 191/545 (35%), Positives = 287/545 (52%), Gaps = 49/545 (8%)
Query: 9 NQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARF 67
++T N++ + + C +I LKQ+ + + G +L+ +L + L YA
Sbjct: 8 DRTTNRRRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHK 67
Query: 68 IFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDV 127
+FD + P+ + ++ A Q SLY +M +RG P+++ + VLK+C
Sbjct: 68 LFDEIPKPDVSICNHVLRGSA-QSMKPEKTVSLYTEMEKRG-VSPDRYTFTFVLKACSK- 124
Query: 128 LESRGTKMV-HTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
LE R H ++V+ GF V+ AL+ ++ G D+GIA +LFD+ + + V+W++
Sbjct: 125 LEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCG-DLGIASELFDDSAKAHKVAWSS 183
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGC----------------------TQ 224
M SGY + G I A LFD MP +D AWN +I GC T
Sbjct: 184 MTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTW 243
Query: 225 NGLFS---------DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGY 275
N + S +A+ F+ M P+ VT++ LSA G L+ GK +H Y
Sbjct: 244 NAMISGYVNCGYPKEALGIFKEMR---DAGEHPDVVTILSLLSACAVLGDLETGKRLHIY 300
Query: 276 VYRNG-----LDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHG 330
+ + + + I NALIDMY KCGS+ A F + L++WN++I ALH
Sbjct: 301 ILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH- 359
Query: 331 QSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQI 390
+E SI +FEEM R + + P+ VTFI ++ AC+H G V++GR YF LM Y IEP I
Sbjct: 360 HAEGSIEMFEEMQRLK---VWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNI 416
Query: 391 EHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE 450
+HYGC+VD+LGRAG+ EEA V+ MKIEP+ +VW +LL CKIYG + ++A +KL+
Sbjct: 417 KHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLS 476
Query: 451 IDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDK 510
+ + G ++L+NIY G+WD V+KVRKM D K G S IE D L
Sbjct: 477 MRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLS 536
Query: 511 THPRT 515
+ P +
Sbjct: 537 SEPES 541
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 315 bits (808), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 165/509 (32%), Positives = 270/509 (53%), Gaps = 54/509 (10%)
Query: 59 LSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYP 118
L ++ AR +FD + N + MI +Y + + ++ M +P+ + +P
Sbjct: 87 LKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGE-GVKVFGTMCG-CNVRPDHYTFP 144
Query: 119 HVLKSCPDVLESRGT----KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFD 174
VLK+C GT + +H K G V LV+ Y + G + AR + D
Sbjct: 145 CVLKAC----SCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGF-LSEARLVLD 199
Query: 175 EMSDRNVVSWTAMISGY-------------------------------------TRVGDI 197
EMS R+VVSW +++ GY T ++
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
+F M + + +WN +I +N + +A+ + RM +D P+ V++ L
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRME---ADGFEPDAVSITSVL 316
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
A G T L LGK IHGY+ R L + + NALIDMY KCG L++AR F+ + +
Sbjct: 317 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV 376
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
SW +MI+++ G+ +++ +F ++ QD + PD + F++ L AC+H GL+E+GR+ F
Sbjct: 377 SWTAMISAYGFSGRGCDAVALFSKL---QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCF 433
Query: 378 KLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGR 437
KLMT Y+I P++EH C+VDLLGRAG+ +EA ++ M +EP+E VWG+LL C+++
Sbjct: 434 KLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSD 493
Query: 438 TDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIE 497
TD A KL ++ P GY ++L+NIY + G+W+EV +R ++K + K PG S +E
Sbjct: 494 TDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVE 553
Query: 498 VDKQVHQFHSLDKTHPRTEEIYDALESMV 526
V++ +H F D++HP+++EIY L+ +V
Sbjct: 554 VNRIIHTFLVGDRSHPQSDEIYRELDVLV 582
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 171/393 (43%), Gaps = 72/393 (18%)
Query: 110 PQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIA 169
PQ F+ VL + PD+ R + VH++I+ R + +G+
Sbjct: 38 PQETVFLLGQVLDTYPDI---RTLRTVHSRIILEDL---------------RCNSSLGVK 79
Query: 170 RKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFS 229
++ Y + D+ +A +FD +P+R+V N +I NG +
Sbjct: 80 -----------------LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYG 122
Query: 230 DAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISN 289
+ + F G N+RP+ T C L A +G + +G+ IHG + GL F+ N
Sbjct: 123 EGVKVF---GTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGN 179
Query: 290 ALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHN 349
L+ MYGKCG L EAR D S++ + SWNS++ +A + + ++++ V EM +
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM---ESVK 236
Query: 350 IRPDGVTFISLLNAC---THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRF 406
I D T SLL A T ++ +FK+ K+ + + ++ + +
Sbjct: 237 ISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKS------LVSWNVMIGVYMKNAMP 290
Query: 407 EEALEVVKGMK---IEPDEVVWGSLLNGC----------KIYGRTDFAEFAVKKLIEIDP 453
EA+E+ M+ EPD V S+L C KI+G + + L+E
Sbjct: 291 VEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE--- 347
Query: 454 NNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
N L ++Y + G ++ R V + +K R+
Sbjct: 348 -NA-----LIDMYAKCGCLEKARDVFENMKSRD 374
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 312 bits (800), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 280/501 (55%), Gaps = 41/501 (8%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTL--KLSNLTYARFIFDHLT 73
+L+ ER + ++Q +F+ G F A KLV F + ++YA I + +
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
+PN + + ++I AYA+ + A +++R+M+ G P+++ + VLK+C
Sbjct: 102 SPNGFTHNSVIRAYANS-STPEVALTVFREMLL-GPVFPDKYSFTFVLKACAAFCGFEEG 159
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSG------------------------------ 163
+ +H +KSG VE LVN Y RSG
Sbjct: 160 RQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEK 219
Query: 164 NDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCT 223
+ AR LFDEM +RNV SW MISGY G +K A +FDSMP RDV +WN+++
Sbjct: 220 GLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYA 279
Query: 224 QNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDL 283
G +++ + F +M + ++ +P+ TLV LSA G L G+ +H Y+ ++G+++
Sbjct: 280 HVGCYNEVLEVFNKMLDDSTE--KPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEI 337
Query: 284 DSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
+ F++ AL+DMY KCG + +A F SK+ +++WNS+I+ ++HG ++++ +F EM+
Sbjct: 338 EGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMV 397
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
+P+G+TFI +L+AC H G+++Q R F++M+ YR+EP IEHYGC+VDLLGR
Sbjct: 398 Y---EGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRM 454
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEID-PNNGGYGIML 462
G+ EEA E+V + + ++ SLL CK +G+ + AE +L+E++ ++ GY M
Sbjct: 455 GKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQM- 513
Query: 463 ANIYGELGKWDEVRKVRKMLK 483
+N+Y G+W++V R+ ++
Sbjct: 514 SNLYASDGRWEKVIDGRRNMR 534
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 311 bits (798), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 165/469 (35%), Positives = 262/469 (55%), Gaps = 17/469 (3%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + AR FD + + + +IT YA Q A L+ + P + F
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYA-QSGKIDEARQLFDE-----SPVQDVFT 283
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
+ ++ +++R + ++ E+ V A++ Y + G + +A++LFD M
Sbjct: 284 WTAMVSG---YIQNRMVEEAR-ELFDKMPERNEVSWNAMLAGYVQ-GERMEMAKELFDVM 338
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
RNV +W MI+GY + G I A +LFD MP RD +W ++IAG +Q+G +A+ F
Sbjct: 339 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
+M E R N+ + ALS L+LGK +HG + + G + F+ NAL+ MY
Sbjct: 399 QMEREGG---RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 455
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCGS++EA F + K + SWN+MI ++ HG E ++ FE M R ++PD T
Sbjct: 456 KCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKR---EGLKPDDAT 512
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+++L+AC+H GLV++GR YF MT+ Y + P +HY C+VDLLGRAG E+A ++K M
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
EPD +WG+LL +++G T+ AE A K+ ++P N G ++L+N+Y G+W +V
Sbjct: 573 PFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVG 632
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
K+R ++D+ K PG SWIE+ + H F D+ HP +EI+ LE +
Sbjct: 633 KLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEEL 681
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 151/313 (48%), Gaps = 29/313 (9%)
Query: 145 FEQYP----VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
F++ P V +++ Y R+G + +ARKLFDEM +R++VSW MI GY R ++ A
Sbjct: 87 FKRMPRWSSVSYNGMISGYLRNG-EFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKA 145
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
LF+ MP+RDV +WN++++G QNG DA S F RM N V+ LSA
Sbjct: 146 RELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP-------EKNDVSWNALLSAY 198
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWN 320
++ ++ + R L S+ N L+ + K + EAR+ FD + + + SWN
Sbjct: 199 VQNSKMEEACML--FKSRENWALVSW--NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWN 254
Query: 321 SMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLM 380
++I +A G+ + + +F+E + D T+ ++++ +VE+ R F M
Sbjct: 255 TIITGYAQSGKIDEARQLFDE-------SPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Query: 381 TKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+ + + ++ + R E A E+ M + W +++ G G+
Sbjct: 308 PERNEVS-----WNAMLAGYVQGERMEMAKELFDVMPCR-NVSTWNTMITGYAQCGKISE 361
Query: 441 AEFAVKKLIEIDP 453
A+ K+ + DP
Sbjct: 362 AKNLFDKMPKRDP 374
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 136/342 (39%), Gaps = 62/342 (18%)
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
D ++ W IS Y R G A +F MP ++N +I+G +NG F A F
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M P + + + G+ LGK + D+ S+ N ++ Y +
Sbjct: 121 M---------PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSW--NTMLSGYAQ 169
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF------------------ 339
G + +AR FDR +K SWN++++++ + + E + +F
Sbjct: 170 NGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGF 229
Query: 340 -------EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF------KLMTKTYRI 386
E N+R D V++ +++ G +++ R F + T T +
Sbjct: 230 VKKKKIVEARQFFDSMNVR-DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMV 288
Query: 387 EPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVK 446
I++ EEA E+ M E +EV W ++L G Y + + E A K
Sbjct: 289 SGYIQNR-----------MVEEARELFDKMP-ERNEVSWNAMLAG---YVQGERMEMA-K 332
Query: 447 KLIEIDP--NNGGYGIMLANIYGELGKWDEVRKVRKMLKDRN 486
+L ++ P N + M+ Y + GK E + + + R+
Sbjct: 333 ELFDVMPCRNVSTWNTMITG-YAQCGKISEAKNLFDKMPKRD 373
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 310 bits (794), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/487 (33%), Positives = 281/487 (57%), Gaps = 12/487 (2%)
Query: 45 NFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM 104
N Y++ + +K L AR +FD + + + M+ YA Q + A Y++
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYA-QDGNLHEALWFYKEF 170
Query: 105 VRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGN 164
RR + N+F + +L +C + + + H Q++ +GF V+ +++++Y++ G
Sbjct: 171 -RRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQ 229
Query: 165 DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQ 224
+ A++ FDEM+ +++ WT +ISGY ++GD++ A LF MP+++ +W ++IAG +
Sbjct: 230 -MESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 225 NGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLD 284
G + A+ FR+M ++ ++P Q T L A L+ GK IHGY+ R + +
Sbjct: 289 QGSGNRALDLFRKM---IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPN 345
Query: 285 SFISNALIDMYGKCGSLKEARRAFDR-NSKKRLTSWNSMINSFALHGQSENSICVFEEMM 343
+ + ++LIDMY K GSL+ + R F + K WN+MI++ A HG ++ + ++M+
Sbjct: 346 AIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMI 405
Query: 344 RCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRA 403
+ ++P+ T + +LNAC+H GLVE+G +F+ MT + I P EHY CL+DLLGRA
Sbjct: 406 K---FRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRA 462
Query: 404 GRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLA 463
G F+E + ++ M EPD+ +W ++L C+I+G + + A +LI++DP + I+L+
Sbjct: 463 GCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLS 522
Query: 464 NIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKT--HPRTEEIYDA 521
+IY + GKW+ V K+R ++K R K SWIE++K+V F D + H R EEIY
Sbjct: 523 SIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFI 582
Query: 522 LESMVAL 528
L ++ A+
Sbjct: 583 LHNLAAV 589
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 193/415 (46%), Gaps = 44/415 (10%)
Query: 82 AMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIV 141
+ ++ +A++ A S A S + ++G P + +L+ C D + K +H +
Sbjct: 16 SFLSKHATK-AELSQAVSRLESLTQQGIRLPFDLL-ASLLQQCGDTKSLKQGKWIHRHLK 73
Query: 142 KSGFEQ-YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
+GF++ ++ L+ Y + G I A K+FD+M RN+ SW M+SGY + G + A
Sbjct: 74 ITGFKRPNTLLSNHLIGMYMKCGKPID-ACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRA 132
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISF---FRRMGMEVSDNIRPNQVTLVCAL 257
+FDSMP+RDV +WN+++ G Q+G +A+ F FRR G I+ N+ + L
Sbjct: 133 RVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSG------IKFNEFSFAGLL 186
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
+A + LQL + HG V G + +S ++ID Y KCG ++ A+R FD + K +
Sbjct: 187 TACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIH 246
Query: 318 SWNSMINSFALHGQSENSICVFEEM---------------MRCQDHN------------- 349
W ++I+ +A G E + +F EM +R N
Sbjct: 247 IWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALG 306
Query: 350 IRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEA 409
++P+ TF S L A + G+ M +T + P L+D+ ++G E +
Sbjct: 307 VKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEAS 365
Query: 410 LEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDPNNGGYGIML 462
V + + D V W ++++ +G A + +I+ + PN ++L
Sbjct: 366 ERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVIL 420
>sp|Q1PEU4|PP201_ARATH Pentatricopeptide repeat-containing protein At2g44880
OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2
Length = 555
Score = 309 bits (792), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 285/547 (52%), Gaps = 71/547 (12%)
Query: 43 QTNFYAFKLVRFCTLKLSNLTYARFIFDHLTT-PNTYLYTAMITAYASQPAHASSAFSLY 101
+TN F + + YAR +FD +++L +MI AY + S F+LY
Sbjct: 7 ETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDS-FALY 65
Query: 102 RDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQI--------------------- 140
RD+ + P+ F + + KSC + +H+QI
Sbjct: 66 RDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAK 125
Query: 141 ------VKSGFEQYP----VVETALVNSYSRSGN-------------------------- 164
++ F++ P V TAL++ Y R G
Sbjct: 126 FGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDG 185
Query: 165 -----DIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVI 219
D+ AR+LFDEM+ + V++WT MI GY + DI A LFD+MP+R++ +WN++I
Sbjct: 186 FVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMI 245
Query: 220 AGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRN 279
G QN + I F+ M + + ++ P+ VT++ L AI TG L LG+ H +V R
Sbjct: 246 GGYCQNKQPQEGIRLFQEM--QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRK 303
Query: 280 GLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVF 339
LD + A++DMY KCG +++A+R FD +K++ SWN+MI+ +AL+G + ++ +F
Sbjct: 304 KLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLF 363
Query: 340 EEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDL 399
MM + +PD +T ++++ AC HGGLVE+GR +F +M + + +IEHYGC+VDL
Sbjct: 364 VTMMIEE----KPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDL 418
Query: 400 LGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYG 459
LGRAG +EA +++ M EP+ ++ S L+ C Y + AE +KK +E++P N G
Sbjct: 419 LGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNY 478
Query: 460 IMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIY 519
++L N+Y +WD+ V+ +++ A K GCS IE++ V +F S D THP I+
Sbjct: 479 VLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIH 538
Query: 520 DALESMV 526
L ++
Sbjct: 539 LVLGDLL 545
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 308 bits (790), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 290/513 (56%), Gaps = 12/513 (2%)
Query: 16 VLAILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
++ ++ C + L+ ++ +F+ G + LV +K + + A+ +FD
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM-YMKCNAIDVAKRLFDEY 297
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
N L AM + Y Q A ++ M+ G +P++ + SC +
Sbjct: 298 GASNLDLCNAMASNYVRQ-GLTREALGVFNLMMDSG-VRPDRISMLSAISSCSQLRNILW 355
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
K H ++++GFE + + AL++ Y + A ++FD MS++ VV+W ++++GY
Sbjct: 356 GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ-DTAFRIFDRMSNKTVVTWNSIVAGYV 414
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
G++ A F++MP++++ +WN++I+G Q LF +AI F M+ + + + VT
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF--CSMQSQEGVNADGVT 472
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
++ SA GH G L L K I+ Y+ +NG+ LD + L+DM+ +CG + A F+ +
Sbjct: 473 MMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT 532
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+ +++W + I + A+ G +E +I +F++M+ + ++PDGV F+ L AC+HGGLV+Q
Sbjct: 533 NRDVSAWTAAIGAMAMAGNAERAIELFDDMI---EQGLKPDGVAFVGALTACSHGGLVQQ 589
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
G+ F M K + + P+ HYGC+VDLLGRAG EEA+++++ M +EP++V+W SLL C
Sbjct: 590 GKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAAC 649
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
++ G + A +A +K+ + P G ++L+N+Y G+W+++ KVR +K++ K PG
Sbjct: 650 RVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPG 709
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
S I++ + H+F S D++HP I L+ +
Sbjct: 710 TSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEV 742
Score = 142 bits (357), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 201/442 (45%), Gaps = 53/442 (11%)
Query: 8 LNQT-LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLV-RFCTLKL-SNLTY 64
LNQ+ + + L+ C I+ LK LT G KLV R C L +L++
Sbjct: 26 LNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSF 85
Query: 65 ARFIFDHLTTPNT-YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
A+ +F++ + T ++Y ++I YAS + A L+ M+ G P+++ +P L +
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASS-GLCNEAILLFLRMMNSG-ISPDKYTFPFGLSA 143
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
C +H IVK G+ + V+ +LV+ Y+
Sbjct: 144 CAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAE---------------------- 181
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
G++ +A +FD M +R+V +W S+I G + DA+ F RM +
Sbjct: 182 ----------CGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD-- 229
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
+ + PN VT+VC +SA L+ G+ ++ ++ +G++++ + +AL+DMY KC ++
Sbjct: 230 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A+R FD L N+M +++ G + ++ VF MM D +RPD ++ +S +++
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM---DSGVRPDRISMLSAISS 346
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHY----GCLVDLLGRAGRFEEALEVVKGMKIE 419
C+ + G++ Y + E + L+D+ + R + A + M
Sbjct: 347 CSQLRNILWGKS-----CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS-N 400
Query: 420 PDEVVWGSLLNGCKIYGRTDFA 441
V W S++ G G D A
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAA 422
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 307 bits (786), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/498 (33%), Positives = 273/498 (54%), Gaps = 44/498 (8%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQ------------------PAHASSAFSLYRDMVR 106
AR +FD ++ + +A++ AYA + A+ S + R
Sbjct: 170 ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR 229
Query: 107 RGQPQPNQFIYP--HVLKSCPD------VLESRGT-------KMVHTQIVKSGFEQYPVV 151
G + ++ H L CPD VL S G +++H ++K G + V
Sbjct: 230 SGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCV 289
Query: 152 ETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDR- 210
+A+++ Y +SG+ GI LF++ A I+G +R G + A +F+ ++
Sbjct: 290 ISAMIDMYGKSGHVYGII-SLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQT 348
Query: 211 ---DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQ 267
+V +W S+IAGC QNG +A+ FR M + ++PN VT+ L A G+ L
Sbjct: 349 MELNVVSWTSIIAGCAQNGKDIEALELFREMQVA---GVKPNHVTIPSMLPACGNIAALG 405
Query: 268 LGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFA 327
G+ HG+ R L + + +ALIDMY KCG + ++ F+ K L WNS++N F+
Sbjct: 406 HGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFS 465
Query: 328 LHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIE 387
+HG+++ + +FE +MR + ++PD ++F SLL+AC GL ++G YFK+M++ Y I+
Sbjct: 466 MHGKAKEVMSIFESLMRTR---LKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIK 522
Query: 388 PQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKK 447
P++EHY C+V+LLGRAG+ +EA +++K M EPD VWG+LLN C++ D AE A +K
Sbjct: 523 PRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEK 582
Query: 448 LIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHS 507
L ++P N G ++L+NIY G W EV +R ++ K PGCSWI+V +V+ +
Sbjct: 583 LFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLA 642
Query: 508 LDKTHPRTEEIYDALESM 525
DK+HP+ ++I + ++ +
Sbjct: 643 GDKSHPQIDQITEKMDEI 660
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 214/466 (45%), Gaps = 53/466 (11%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A + + P Y ++++I A S ++ M G P+ + P++ K C
Sbjct: 69 ADLVLQSIPDPTIYSFSSLIYALTKAKLFTQS-IGVFSRMFSHGLI-PDSHVLPNLFKVC 126
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
++ + K +H SG + V+ ++ + Y R G +G ARK+FD MSD++VV+
Sbjct: 127 AELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGR-MGDARKVFDRMSDKDVVTC 185
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPA----WNSVIAGCTQNGLFSDAISFFRRMGM 240
+A++ Y R G ++ + M + A WN +++G ++G +A+ F+++
Sbjct: 186 SALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH- 244
Query: 241 EVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS 300
P+QVT+ L ++G + ML +G++IHGYV + GL D + +A+IDMYGK G
Sbjct: 245 --HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGH 302
Query: 301 -------------------------------LKEARRAF----DRNSKKRLTSWNSMINS 325
+ +A F ++ + + SW S+I
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362
Query: 326 FALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYR 385
A +G+ ++ +F EM Q ++P+ VT S+L AC + + GR+ + +
Sbjct: 363 CAQNGKDIEALELFREM---QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419
Query: 386 IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAV 445
++ + L+D+ + GR + ++V M + V W SL+NG ++G+
Sbjct: 420 LD-NVHVGSALIDMYAKCGRINLS-QIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 446 KKLI--EIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYK 489
+ L+ + P+ + +L+ G++G DE K KM+ + K
Sbjct: 478 ESLMRTRLKPDFISFTSLLSAC-GQVGLTDEGWKYFKMMSEEYGIK 522
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 100/195 (51%), Gaps = 12/195 (6%)
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRM---GMEVS 243
+I+ Y+ +A + S+PD + +++S+I T+ LF+ +I F RM G+
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
++ PN + LSA ++GK IH +GLD+D+F+ ++ MY +CG + +
Sbjct: 116 SHVLPNLFKVCAELSA------FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGD 169
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
AR+ FDR S K + + ++++ ++A G E + + EM + I + V++ +L+
Sbjct: 170 ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM---ESSGIEANIVSWNGILSG 226
Query: 364 CTHGGLVEQGRAYFK 378
G ++ F+
Sbjct: 227 FNRSGYHKEAVVMFQ 241
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 306 bits (783), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 176/515 (34%), Positives = 263/515 (51%), Gaps = 51/515 (9%)
Query: 16 VLAILERCNHINHLK---QLQSFLTTLGQSQTNFYAFKLVRFCTL--KLSNLTYARFIFD 70
+L IL + L+ Q+ S T G ++ L F +L K + +F
Sbjct: 224 LLDILPAVAELQELRLGMQIHSLATKTGCYSHDYV---LTGFISLYSKCGKIKMGSALFR 280
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
P+ Y AMI Y S + SL+++++ G + + V S +L
Sbjct: 281 EFRKPDIVAYNAMIHGYTSN-GETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML-- 337
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
+H +KS F + V TAL YS+
Sbjct: 338 --IYAIHGYCLKSNFLSHASVSTALTTVYSK----------------------------- 366
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
+ +I++A LFD P++ +P+WN++I+G TQNGL DAIS FR M PN
Sbjct: 367 ---LNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ---KSEFSPNP 420
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
VT+ C LSA G L LGK +H V + ++S ALI MY KCGS+ EARR FD
Sbjct: 421 VTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDL 480
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
+KK +WN+MI+ + LHGQ + ++ +F EM+ + I P VTF+ +L AC+H GLV
Sbjct: 481 MTKKNEVTWNTMISGYGLHGQGQEALNIFYEML---NSGITPTPVTFLCVLYACSHAGLV 537
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
++G F M Y EP ++HY C+VD+LGRAG + AL+ ++ M IEP VW +LL
Sbjct: 538 KEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLG 597
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
C+I+ T+ A +KL E+DP+N GY ++L+NI+ + + VR+ K R K
Sbjct: 598 ACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKA 657
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PG + IE+ + H F S D++HP+ +EIY+ LE +
Sbjct: 658 PGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKL 692
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 169/373 (45%), Gaps = 44/373 (11%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
AR +FD + +T L+ MI+ Y + S ++RD++ + + +L +
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVES-IQVFRDLINESCTRLDTTTLLDILPAV 231
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
++ E R +H+ K+G + V T ++ YS+ G I + LF E ++V++
Sbjct: 232 AELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK-IKMGSALFREFRKPDIVAY 290
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
AMI GYT G+ + + SLF + +++G
Sbjct: 291 NAMIHGYTSNGETELSLSLFKEL----------MLSGA---------------------- 318
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
R TLV + GH L L IHGY ++ + +S AL +Y K ++ A
Sbjct: 319 --RLRSSTLVSLVPVSGH---LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R+ FD + +K L SWN+MI+ + +G +E++I +F EM Q P+ VT +L+AC
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM---QKSEFSPNPVTITCILSAC 430
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
G + G+ L+ T E I L+ + + G EA + M + +EV
Sbjct: 431 AQLGALSLGKWVHDLVRST-DFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEVT 488
Query: 425 WGSLLNGCKIYGR 437
W ++++G ++G+
Sbjct: 489 WNTMISGYGLHGQ 501
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/508 (20%), Positives = 202/508 (39%), Gaps = 84/508 (16%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFK----LVRFCTLKLSNLT---YARFIF 69
L +R I+HL Q +Q + F+ L+ T +LS+L YAR IF
Sbjct: 24 LDFFKRSTSISHLAQ--------THAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIF 75
Query: 70 DHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLE 129
+ P+ +L+ ++ ++ + SS S++ + + +PN Y + + +
Sbjct: 76 LSVQRPDVFLFNVLMRGFSVNESPHSS-LSVFAHLRKSTDLKPNSSTYAFAISAASGFRD 134
Query: 130 SRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMIS 189
R +++H Q V G + ++ + +V Y + + ARK+FD M +++ + W MIS
Sbjct: 135 DRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWR-VEDARKVFDRMPEKDTILWNTMIS 193
Query: 190 GYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPN 249
GY + N ++ ++I FR + E R +
Sbjct: 194 GYRK-------------------------------NEMYVESIQVFRDLINE--SCTRLD 220
Query: 250 QVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFD 309
TL+ L A+ L+LG IH + G ++ I +Y KCG +K F
Sbjct: 221 TTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFR 280
Query: 310 RNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGL 369
K + ++N+MI+ + +G++E S+ +F+E+M R T +SL+ H L
Sbjct: 281 EFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS---GARLRSSTLVSLVPVSGHLML 337
Query: 370 VEQGRAYF------------KLMTKTYRIEPQIE---------------HYGCLVDLLGR 402
+ Y +T Y +IE + ++ +
Sbjct: 338 IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 403 AGRFEEALEVVKGMK---IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGY- 458
G E+A+ + + M+ P+ V +L+ C G ++ + D + Y
Sbjct: 398 NGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYV 457
Query: 459 GIMLANIYGELGKWDEVRKVRKMLKDRN 486
L +Y + G E R++ ++ +N
Sbjct: 458 STALIGMYAKCGSIAEARRLFDLMTKKN 485
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 305 bits (782), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 165/515 (32%), Positives = 289/515 (56%), Gaps = 42/515 (8%)
Query: 14 QQVLAILERCNHINHLKQLQS-FLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFD 70
Q+ L +L+RC++I+ KQ+ + F+ ++F A ++ C +++ YA IF
Sbjct: 31 QECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFR 90
Query: 71 HLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLES 130
+ P T+ + MI Y + + A Y +M++RG +P+ F YP +LK+C +
Sbjct: 91 GIDDPCTFDFNTMIRGYVNVMSF-EEALCFYNEMMQRGN-EPDNFTYPCLLKACTRLKSI 148
Query: 131 RGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
R K +H Q+ K G E V+ +L+N Y R G ++ ++ +F+++ + SW++M+S
Sbjct: 149 REGKQIHGQVFKLGLEADVFVQNSLINMYGRCG-EMELSSAVFEKLESKTAASWSSMVSA 207
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQ 250
R G G++S+ + FR GM N++ +
Sbjct: 208 --RAG-----------------------------MGMWSECLLLFR--GMCSETNLKAEE 234
Query: 251 VTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR 310
+V AL A +TG L LG IHG++ RN +L+ + +L+DMY KCG L +A F +
Sbjct: 235 SGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQK 294
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
K+ ++++MI+ ALHG+ E+++ +F +M++ + PD V ++S+LNAC+H GLV
Sbjct: 295 MEKRNNLTYSAMISGLALHGEGESALRMFSKMIK---EGLEPDHVVYVSVLNACSHSGLV 351
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
++GR F M K ++EP EHYGCLVDLLGRAG EEALE ++ + IE ++V+W + L+
Sbjct: 352 KEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
C++ + + A ++L+++ +N G ++++N+Y + WD+V + R + + +T
Sbjct: 412 QCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQT 471
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PG S +E+ + H+F S D++HP+ +EIY L M
Sbjct: 472 PGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQM 506
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 305 bits (781), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 162/469 (34%), Positives = 261/469 (55%), Gaps = 40/469 (8%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K +L AR +FD + N + +MI AY Q + A +++ M+ G +P
Sbjct: 283 KCGSLETARQLFDGMLERNVVSWNSMIDAYV-QNENPKEAMLIFQKMLDEG-VKPTDVSV 340
Query: 118 PHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMS 177
L +C D+ + + +H V+ G
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGL-------------------------------- 368
Query: 178 DRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRR 237
DRNV ++IS Y + ++ AAS+F + R + +WN++I G QNG DA+++F +
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428
Query: 238 MGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGK 297
M S ++P+ T V ++AI + K IHG V R+ LD + F++ AL+DMY K
Sbjct: 429 MR---SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Query: 298 CGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTF 357
CG++ AR FD S++ +T+WN+MI+ + HG + ++ +FEEM Q I+P+GVTF
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM---QKGTIKPNGVTF 542
Query: 358 ISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMK 417
+S+++AC+H GLVE G F +M + Y IE ++HYG +VDLLGRAGR EA + + M
Sbjct: 543 LSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP 602
Query: 418 IEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRK 477
++P V+G++L C+I+ +FAE A ++L E++P++GGY ++LANIY W++V +
Sbjct: 603 VKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQ 662
Query: 478 VRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
VR + + KTPGCS +E+ +VH F S HP +++IY LE ++
Sbjct: 663 VRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLI 711
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 184/362 (50%), Gaps = 43/362 (11%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVR-FCTLKLSNLTYARFIFDHLTTPNT 77
+LERC+ + L+Q+ + G Q +F+ KLV FC + ++ A +F+ + +
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFC--RYGSVDEAARVFEPIDSKLN 100
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVH 137
LY M+ +A + + A + M R +P + + ++LK C D E R K +H
Sbjct: 101 VLYHTMLKGFA-KVSDLDKALQFFVRM-RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 138 TQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDI 197
+VKSGF T L N Y++ +
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQ--------------------------------V 186
Query: 198 KNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCAL 257
A +FD MP+RD+ +WN+++AG +QNG+ A+ + M +N++P+ +T+V L
Sbjct: 187 NEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM---CEENLKPSFITIVSVL 243
Query: 258 SAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLT 317
A+ ++ +GK IHGY R+G D IS AL+DMY KCGSL+ AR+ FD ++ +
Sbjct: 244 PAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVV 303
Query: 318 SWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYF 377
SWNSMI+++ + + ++ +F++M+ D ++P V+ + L+AC G +E+GR
Sbjct: 304 SWNSMIDAYVQNENPKEAMLIFQKML---DEGVKPTDVSVMGALHACADLGDLERGRFIH 360
Query: 378 KL 379
KL
Sbjct: 361 KL 362
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 126/247 (51%), Gaps = 8/247 (3%)
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
T ++S + R G + AA +F+ + + +++++ G + A+ FF RM D
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRY---D 129
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEA 304
++ P L G L++GK IHG + ++G LD F L +MY KC + EA
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 305 RRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNAC 364
R+ FDR ++ L SWN+++ ++ +G + ++ + + M C++ N++P +T +S+L A
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM--CEE-NLKPSFITIVSVLPAV 246
Query: 365 THGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVV 424
+ L+ G+ ++ + + LVD+ + G E A ++ GM +E + V
Sbjct: 247 SALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVS 304
Query: 425 WGSLLNG 431
W S+++
Sbjct: 305 WNSMIDA 311
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 5/175 (2%)
Query: 276 VYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENS 335
V++NGL + F L+ ++ + GS+ EA R F+ K +++M+ FA + +
Sbjct: 60 VFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKA 119
Query: 336 ICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+ F +R + ++ P F LL C + G+ L+ K+ G
Sbjct: 120 LQFF---VRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTG- 175
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE 450
L ++ + + EA +V M E D V W +++ G G A VK + E
Sbjct: 176 LENMYAKCRQVNEARKVFDRMP-ERDLVSWNTIVAGYSQNGMARMALEMVKSMCE 229
>sp|Q9FX24|PPR71_ARATH Pentatricopeptide repeat-containing protein At1g34160
OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2
Length = 581
Score = 304 bits (778), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/515 (33%), Positives = 285/515 (55%), Gaps = 53/515 (10%)
Query: 19 ILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK-LSNLTYARFIFDHLTTPNT 77
++++C + +KQLQS T G Q++F +L+ C + +L++A IF ++ P T
Sbjct: 9 MIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLT 68
Query: 78 YLYTAMITAYASQPAHASSAFSLYRDMVRRGQP-----QPNQFIYPHVLKSCPDVLESRG 132
+ A+I +A +H S AFS YR M+++ + + LK+C L S
Sbjct: 69 NDWNAIIRGFAG-SSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
+H QI + G ++ T L+++YS++
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKN------------------------------ 157
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
GD+ +A LFD MP RDV +WN++IAG S+A+ ++RM E IR ++VT
Sbjct: 158 --GDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETE---GIRRSEVT 212
Query: 253 LVCALSAIGHTGMLQLGK-VIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDR- 310
+V AL A H G ++ G+ + HGY N + +SNA IDMY KCG + +A + F++
Sbjct: 213 VVAALGACSHLGDVKEGENIFHGYSNDNVI-----VSNAAIDMYSKCGFVDKAYQVFEQF 267
Query: 311 NSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLV 370
KK + +WN+MI FA+HG++ ++ +F+++ +D+ I+PD V++++ L AC H GLV
Sbjct: 268 TGKKSVVTWNTMITGFAVHGEAHRALEIFDKL---EDNGIKPDDVSYLAALTACRHAGLV 324
Query: 371 EQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLN 430
E G + F M +E ++HYGC+VDLL RAGR EA +++ M + PD V+W SLL
Sbjct: 325 EYGLSVFNNMA-CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLG 383
Query: 431 GCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKT 490
+IY + AE A +++ E+ NN G ++L+N+Y G+W +V +VR ++ + K
Sbjct: 384 ASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKI 443
Query: 491 PGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
PG S+IE +H+F++ DK+H + EIY+ ++ +
Sbjct: 444 PGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEI 478
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 303 bits (776), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/523 (32%), Positives = 281/523 (53%), Gaps = 43/523 (8%)
Query: 6 NQLNQTLNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL--SNLT 63
++++ Q + ++ +CN + L Q+Q++ +F A KL+ FCT S+++
Sbjct: 22 SKIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVA-KLINFCTESPTESSMS 80
Query: 64 YARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKS 123
YAR +F+ ++ P+ ++ +M Y S+ + FSL+ +++ G P+ + +P +LK+
Sbjct: 81 YARHLFEAMSEPDIVIFNSMARGY-SRFTNPLEVFSLFVEILEDGI-LPDNYTFPSLLKA 138
Query: 124 CPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVS 183
C + +H +K G D NV
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGL--------------------------------DDNVYV 166
Query: 184 WTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVS 243
+I+ YT D+ +A +FD + + V +N++I G + ++A+S FR M
Sbjct: 167 CPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ---G 223
Query: 244 DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKE 303
++PN++TL+ LS+ G L LGK IH Y ++ ++ ALIDM+ KCGSL +
Sbjct: 224 KYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDD 283
Query: 304 ARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNA 363
A F++ K +W++MI ++A HG++E S+ +FE M + N++PD +TF+ LLNA
Sbjct: 284 AVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERM---RSENVQPDEITFLGLLNA 340
Query: 364 CTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEV 423
C+H G VE+GR YF M + I P I+HYG +VDLL RAG E+A E + + I P +
Sbjct: 341 CSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPM 400
Query: 424 VWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLK 483
+W LL C + D AE +++ E+D ++GG ++L+N+Y KW+ V +RK++K
Sbjct: 401 LWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMK 460
Query: 484 DRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
DR A K PGCS IEV+ VH+F S D T +++ AL+ MV
Sbjct: 461 DRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMV 503
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 303 bits (776), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/514 (32%), Positives = 273/514 (53%), Gaps = 40/514 (7%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLT 73
+L + + ++ + KQ+ ++ S F L+ K ++ A+ IF
Sbjct: 344 SSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALID-AYFKCRGVSMAQNIFSQCN 402
Query: 74 TPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGT 133
+ + ++TAMI+ Y + S ++R +V+ + PN+ +L +L +
Sbjct: 403 SVDVVVFTAMISGYLHNGLYIDS-LEMFRWLVKV-KISPNEITLVSILPVIGILLALKLG 460
Query: 134 KMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTR 193
+ +H I+K GF+ +IG A+I Y +
Sbjct: 461 RELHGFIIKKGFDNR---------------CNIG-----------------CAVIDMYAK 488
Query: 194 VGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTL 253
G + A +F+ + RD+ +WNS+I C Q+ S AI FR+MG+ I + V++
Sbjct: 489 CGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS---GICYDCVSI 545
Query: 254 VCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSK 313
ALSA + GK IHG++ ++ L D + + LIDMY KCG+LK A F +
Sbjct: 546 SAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKE 605
Query: 314 KRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQG 373
K + SWNS+I + HG+ ++S+C+F EM+ + IRPD +TF+ ++++C H G V++G
Sbjct: 606 KNIVSWNSIIAACGNHGKLKDSLCLFHEMV--EKSGIRPDQITFLEIISSCCHVGDVDEG 663
Query: 374 RAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCK 433
+F+ MT+ Y I+PQ EHY C+VDL GRAGR EA E VK M PD VWG+LL C+
Sbjct: 664 VRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACR 723
Query: 434 IYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGC 493
++ + AE A KL+++DP+N GY ++++N + +W+ V KVR ++K+R K PG
Sbjct: 724 LHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGY 783
Query: 494 SWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVA 527
SWIE++K+ H F S D HP + IY L S++
Sbjct: 784 SWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLG 817
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 179/404 (44%), Gaps = 49/404 (12%)
Query: 32 LQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQP 91
L +++LG F A L++ L+ + +FD + + ++ M+ YA
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIK-AYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 92 AHAS--SAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYP 149
A S FS+ +R Q PN + VL C L +H +V SG +
Sbjct: 219 ALDSVIKGFSV----MRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
++ +L++ YS+ G A KLF MS + V+W MISGY
Sbjct: 275 SIKNSLLSMYSKCGR-FDDASKLFRMMSRADTVTWNCMISGY------------------ 315
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
Q+GL ++++FF M +S + P+ +T L ++ L+
Sbjct: 316 -------------VQSGLMEESLTFFYEM---ISSGVLPDAITFSSLLPSVSKFENLEYC 359
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
K IH Y+ R+ + LD F+++ALID Y KC + A+ F + + + + +MI+ + +
Sbjct: 360 KQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHN 419
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQ 389
G +S+ +F +++ + I P+ +T +S+L ++ GR + K +
Sbjct: 420 GLYIDSLEMFRWLVKVK---ISPNEITLVSILPVIGILLALKLGRELHGFIIK--KGFDN 474
Query: 390 IEHYGC-LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
+ GC ++D+ + GR A E+ + + + D V W S++ C
Sbjct: 475 RCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRC 517
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 153/360 (42%), Gaps = 48/360 (13%)
Query: 8 LNQTLNQQVLAILERCNHINHL---KQLQSFL---TTLGQSQTNFYAFKLVRFCTLKLSN 61
L +T+ +++ +L+ C++ N L KQ+ +FL + G S T+ + C S+
Sbjct: 30 LEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCG-SFSD 88
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVL 121
+ D L + + ++I+++ + + A + Y M+ G P+ +P ++
Sbjct: 89 CGKMFYRLD-LRRSSIRPWNSIISSFV-RNGLLNQALAFYFKMLCFGV-SPDVSTFPCLV 145
Query: 122 KSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNV 181
K+C + +G + + G D N
Sbjct: 146 KACVALKNFKGIDFLSDTVSSLGM--------------------------------DCNE 173
Query: 182 VSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGME 241
+++I Y G I + LFD + +D WN ++ G + G I F M M
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRM- 232
Query: 242 VSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
D I PN VT C LS ++ LG +HG V +G+D + I N+L+ MY KCG
Sbjct: 233 --DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRF 290
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+A + F S+ +WN MI+ + G E S+ F EM+ + PD +TF SLL
Sbjct: 291 DDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMI---SSGVLPDAITFSSLL 347
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 120/259 (46%), Gaps = 14/259 (5%)
Query: 174 DEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS 233
D +D ++ AM ++ G + L S + WNS+I+ +NGL + A++
Sbjct: 69 DSYTDERILGMYAMCGSFSDCGKMFYRLDLRRS----SIRPWNSIISSFVRNGLLNQALA 124
Query: 234 FFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALID 293
F+ +M + + P+ T C + A + + V G+D + F++++LI
Sbjct: 125 FYFKM---LCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIK 181
Query: 294 MYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPD 353
Y + G + + FDR +K WN M+N +A G ++ I F M Q I P+
Sbjct: 182 AYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ---ISPN 238
Query: 354 GVTFISLLNACTHGGLVEQGRAYFKLMTKT-YRIEPQIEHYGCLVDLLGRAGRFEEALEV 412
VTF +L+ C L++ G L+ + E I++ L+ + + GRF++A ++
Sbjct: 239 AVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN--SLLSMYSKCGRFDDASKL 296
Query: 413 VKGMKIEPDEVVWGSLLNG 431
+ M D V W +++G
Sbjct: 297 FRMMS-RADTVTWNCMISG 314
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 11/220 (5%)
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRA 307
P +++L+ L A + +L+ GK +H ++ N + DS+ ++ MY CGS + +
Sbjct: 35 PRRLSLL--LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKM 92
Query: 308 FDRNSKKR--LTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
F R +R + WNS+I+SF +G ++ + +M+ C + PD TF L+ AC
Sbjct: 93 FYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKML-C--FGVSPDVSTFPCLVKACV 149
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
+G + + ++ L+ G+ + ++ + ++ D V+W
Sbjct: 150 ALKNF-KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV-LQKDCVIW 207
Query: 426 GSLLNGCKIYGRTD--FAEFAVKKLIEIDPNNGGYGIMLA 463
+LNG G D F+V ++ +I PN + +L+
Sbjct: 208 NVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLS 247
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 302 bits (774), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 165/466 (35%), Positives = 263/466 (56%), Gaps = 42/466 (9%)
Query: 65 ARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
A+ +FD + + + AMI+ YA + + A L++DM++ +P++ V+ +C
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYA-ETGNYKEALELFKDMMKTNV-RPDESTMVTVVSAC 276
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSW 184
+ VH I GF G+++ I
Sbjct: 277 AQSGSIELGRQVHLWIDDHGF-----------------GSNLKIV--------------- 304
Query: 185 TAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSD 244
A+I Y++ G+++ A LF+ +P +DV +WN++I G T L+ +A+ F+ M +
Sbjct: 305 NALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM---LRS 361
Query: 245 NIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYR--NGLDLDSFISNALIDMYGKCGSLK 302
PN VT++ L A H G + +G+ IH Y+ + G+ S + +LIDMY KCG ++
Sbjct: 362 GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIE 421
Query: 303 EARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLN 362
A + F+ K L+SWN+MI FA+HG+++ S +F M + I+PD +TF+ LL+
Sbjct: 422 AAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI---GIQPDDITFVGLLS 478
Query: 363 ACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDE 422
AC+H G+++ GR F+ MT+ Y++ P++EHYGC++DLLG +G F+EA E++ M++EPD
Sbjct: 479 ACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDG 538
Query: 423 VVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKML 482
V+W SLL CK++G + E + LI+I+P N G ++L+NIY G+W+EV K R +L
Sbjct: 539 VIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALL 598
Query: 483 KDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMVAL 528
D+ K PGCS IE+D VH+F DK HPR EIY LE M L
Sbjct: 599 NDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL 644
Score = 229 bits (585), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/450 (30%), Positives = 238/450 (52%), Gaps = 19/450 (4%)
Query: 13 NQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLK--LSNLTYARFIFD 70
N L++L C + L+ + + + +G TN+ KL+ FC L L YA +F
Sbjct: 33 NHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFK 92
Query: 71 HLTTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL 128
+ PN ++ M +A S P SA LY M+ G PN + +P VLKSC
Sbjct: 93 TIQEPNLLIWNTMFRGHALSSDPV---SALKLYVCMISLGL-LPNSYTFPFVLKSCAKSK 148
Query: 129 ESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMI 188
+ + +H ++K G + V T+L++ Y ++G + A K+FD+ R+VVS+TA+I
Sbjct: 149 AFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGR-LEDAHKVFDKSPHRDVVSYTALI 207
Query: 189 SGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRP 248
GY G I+NA LFD +P +DV +WN++I+G + G + +A+ F+ M + N+RP
Sbjct: 208 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM---MKTNVRP 264
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
++ T+V +SA +G ++LG+ +H ++ +G + I NALID+Y KCG L+ A F
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
+R K + SWN++I + + ++ +F+EM+R + P+ VT +S+L AC H G
Sbjct: 325 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE---TPNDVTMLSILPACAHLG 381
Query: 369 LVEQGRAYFKLMTKTYR-IEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGS 427
++ GR + K + + L+D+ + G E A +V + + W +
Sbjct: 382 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNA 440
Query: 428 LLNGCKIYGRTD--FAEFAVKKLIEIDPNN 455
++ G ++GR D F F+ + I I P++
Sbjct: 441 MIFGFAMHGRADASFDLFSRMRKIGIQPDD 470
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 301 bits (772), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 159/471 (33%), Positives = 269/471 (57%), Gaps = 45/471 (9%)
Query: 62 LTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDM-VRRGQPQPNQFI---- 116
L AR +FD + N +T+MI Y +A A SL++D+ V F+
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGY-DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMG 185
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGND-IGIARKLFDE 175
V+ +C V T+ +H+ ++K GF++ V L+++Y++ G + +ARK+
Sbjct: 186 LVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKI--- 242
Query: 176 MSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFF 235
FD + D+D ++NS+++ Q+G+ ++A F
Sbjct: 243 ----------------------------FDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 236 RRMGMEVSDNIRP-NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDM 294
RR+ V + + N +TL L A+ H+G L++GK IH V R GL+ D + ++IDM
Sbjct: 275 RRL---VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 295 YGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDG 354
Y KCG ++ AR+AFDR K + SW +MI + +HG + ++ +F M+ D +RP+
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI---DSGVRPNY 388
Query: 355 VTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVK 414
+TF+S+L AC+H GL +G +F M + +EP +EHYGC+VDLLGRAG ++A ++++
Sbjct: 389 ITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
Query: 415 GMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDE 474
MK++PD ++W SLL C+I+ + AE +V +L E+D +N GY ++L++IY + G+W +
Sbjct: 449 RMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKD 508
Query: 475 VRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
V +VR ++K+R K PG S +E++ +VH F D+ HP+ E+IY+ L +
Sbjct: 509 VERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAEL 559
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 161/354 (45%), Gaps = 41/354 (11%)
Query: 86 AYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQIVKSGF 145
A + A A AFS R + P + +P +K+C + + K H Q G+
Sbjct: 52 ARSGDSAEALLAFSSMRKL----SLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGY 107
Query: 146 EQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLF- 204
+ V +AL+ YS G + ARK+FDE+ RN+VSWT+MI GY G+ +A SLF
Sbjct: 108 QSDIFVSSALIVMYSTCGK-LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFK 166
Query: 205 DSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTG 264
D + D + D F MG+ V+++ A S + G
Sbjct: 167 DLLVDEND----------------DDDAMFLDSMGL----------VSVISACSRVPAKG 200
Query: 265 MLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGS--LKEARRAFDRNSKKRLTSWNSM 322
L + IH +V + G D + N L+D Y K G + AR+ FD+ K S+NS+
Sbjct: 201 ---LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257
Query: 323 INSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTK 382
++ +A G S + VF +++ + + + +T ++L A +H G + G+ + +
Sbjct: 258 MSVYAQSGMSNEAFEVFRRLVK--NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR 315
Query: 383 TYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYG 436
+E + ++D+ + GR E A + MK + W +++ G ++G
Sbjct: 316 M-GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHG 367
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 96/172 (55%), Gaps = 7/172 (4%)
Query: 198 KNAASLFDSMPDR-DVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCA 256
+N +LF+ D+ DV +WNSVIA ++G ++A+ F M ++ P + + CA
Sbjct: 26 QNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMR---KLSLYPTRSSFPCA 82
Query: 257 LSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRL 316
+ A + GK H + G D F+S+ALI MY CG L++AR+ FD K+ +
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 317 TSWNSMINSFALHGQSENSICVFEEMMRCQ---DHNIRPDGVTFISLLNACT 365
SW SMI + L+G + +++ +F++++ + D + D + +S+++AC+
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
K + AR FD + N +TAMI Y HA+ A L+ M+ G +PN +
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMH-GHAAKALELFPAMIDSG-VRPNYITF 391
Query: 118 PHVLKSC 124
VL +C
Sbjct: 392 VSVLAAC 398
>sp|Q9MA50|PPR13_ARATH Pentatricopeptide repeat-containing protein At1g05750,
chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2
SV=1
Length = 500
Score = 301 bits (772), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 172/458 (37%), Positives = 260/458 (56%), Gaps = 19/458 (4%)
Query: 73 TTPNTYLYTAMITAYA--SQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVL-- 128
T+ T +T+ I + A A+ FS DM G +PN + +L C D
Sbjct: 32 TSETTVSWTSRINLLTRNGRLAEAAKEFS---DMTLAG-VEPNHITFIALLSGCGDFTSG 87
Query: 129 -ESRGTKMVHTQIVKSGFEQ-YPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTA 186
E+ G ++H K G ++ + +V TA++ YS+ G AR +FD M D+N V+W
Sbjct: 88 SEALG-DLLHGYACKLGLDRNHVMVGTAIIGMYSKRGR-FKKARLVFDYMEDKNSVTWNT 145
Query: 187 MISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNI 246
MI GY R G + NAA +FD MP+RD+ +W ++I G + G +A+ +FR M + +
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQIS---GV 202
Query: 247 RPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARR 306
+P+ V ++ AL+A + G L G +H YV + +SN+LID+Y +CG ++ AR+
Sbjct: 203 KPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQ 262
Query: 307 AFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTH 366
F K+ + SWNS+I FA +G + S+ F +M Q+ +PD VTF L AC+H
Sbjct: 263 VFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM---QEKGFKPDAVTFTGALTACSH 319
Query: 367 GGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWG 426
GLVE+G YF++M YRI P+IEHYGCLVDL RAGR E+AL++V+ M ++P+EVV G
Sbjct: 320 VGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIG 379
Query: 427 SLLNGCKIYGRTD-FAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDR 485
SLL C +G AE +K L +++ + ++L+N+Y GKW+ K+R+ +K
Sbjct: 380 SLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGL 439
Query: 486 NAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALE 523
K PG S IE+D +H F + D H T I + LE
Sbjct: 440 GLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLE 477
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 301 bits (771), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 174/530 (32%), Positives = 274/530 (51%), Gaps = 85/530 (16%)
Query: 76 NTYLYTAMITAYASQPAHA-----------SSAFSLYRDMVRRGQPQPNQFIYPHVLKSC 124
+++ + + A AS P + S + SLYR M+R G P+ F +P +LKSC
Sbjct: 5 TSFVRNSAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGS-SPDAFSFPFILKSC 63
Query: 125 PDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDE--MSDRNVV 182
+ + +H + K G E P V TAL++ Y + G + ARK+F+E S + V
Sbjct: 64 ASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGL-VADARKVFEENPQSSQLSV 122
Query: 183 SWTAMISGYTRVGDIKNAASLFDSM----------------PDRDVPAW----NSVIAGC 222
+ A+ISGYT + +AA +F M P VP + S+ C
Sbjct: 123 CYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQC 182
Query: 223 TQNGLFSDA------ISFFRRMG------------------------------------M 240
+ GL S+ I+ + + G +
Sbjct: 183 VKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVL 242
Query: 241 EVSDNIR-----PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMY 295
E+ + ++ P+ TLV LS+ H G ++G + V NG + F+SNA I MY
Sbjct: 243 ELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMY 302
Query: 296 GKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGV 355
+CG+L +AR FD K L SW +MI + +HG E + +F++M++ IRPDG
Sbjct: 303 ARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIK---RGIRPDGA 359
Query: 356 TFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKG 415
F+ +L+AC+H GL ++G F+ M + Y++EP EHY CLVDLLGRAGR +EA+E ++
Sbjct: 360 VFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIES 419
Query: 416 MKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEV 475
M +EPD VWG+LL CKI+ D AE A K+IE +PNN GY ++++NIY + + +
Sbjct: 420 MPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGI 479
Query: 476 RKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESM 525
++R M+++R K PG S++E +VH F + D++H +TEE++ L+ +
Sbjct: 480 WRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Score = 39.7 bits (91), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 58 KLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIY 117
+ NL AR +FD + + +TAMI Y L+ DM++RG +P+ ++
Sbjct: 304 RCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMH-GMGEIGLMLFDDMIKRGI-RPDGAVF 361
Query: 118 PHVLKSCPDV-LESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSG 163
VL +C L +G ++ + E P + LV+ R+G
Sbjct: 362 VMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAG 408
>sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protein At3g04750,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2
SV=1
Length = 661
Score = 300 bits (769), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 290/519 (55%), Gaps = 17/519 (3%)
Query: 14 QQVLAILERCNHINHLKQLQSFLTTLG-QSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
Q L +++ + ++ +KQ+ + G S N+ LV+F ++L N A +F +
Sbjct: 134 QTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKF-YMELGNFGVAEKVFARM 192
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
P+ + MI YA Q + A LY MV G +P+++ +L C + + R
Sbjct: 193 PHPDVSSFNVMIVGYAKQ-GFSLEALKLYFKMVSDG-IEPDEYTVLSLLVCCGHLSDIRL 250
Query: 133 TKMVHTQIVKSG--FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISG 190
K VH I + G + ++ AL++ Y + + G+A++ FD M +++ SW M+ G
Sbjct: 251 GKGVHGWIERRGPVYSSNLILSNALLDMYFKC-KESGLAKRAFDAMKKKDMRSWNTMVVG 309
Query: 191 YTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAIS--FFRRMGMEVSDNIRP 248
+ R+GD++ A ++FD MP RD+ +WNS++ G ++ G + F+ M + + ++P
Sbjct: 310 FVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYE---MTIVEKVKP 366
Query: 249 NQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAF 308
++VT+V +S + G L G+ +HG V R L D+F+S+ALIDMY KCG ++ A F
Sbjct: 367 DRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVF 426
Query: 309 DRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGG 368
++K + W SMI A HG + ++ +F M Q+ + P+ VT +++L AC+H G
Sbjct: 427 KTATEKDVALWTSMITGLAFHGNGQQALQLFGRM---QEEGVTPNNVTLLAVLTACSHSG 483
Query: 369 LVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVV-KGMKIEPDEVVWGS 427
LVE+G F M + +P+ EHYG LVDLL RAGR EEA ++V K M + P + +WGS
Sbjct: 484 LVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGS 543
Query: 428 LLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNA 487
+L+ C+ + AE A+ +L++++P G ++L+NIY +G+W K R+ +++R
Sbjct: 544 ILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGV 603
Query: 488 YKTPGCSWIEVDKQVHQFHSLDK-THPRTEEIYDALESM 525
KT G S + + +H+F + +K HPR EI L+ +
Sbjct: 604 KKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHL 642
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 206/482 (42%), Gaps = 83/482 (17%)
Query: 12 LNQQVLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKL-SNLTYARFIFD 70
LN Q L +LE CN N KQ+ + + F +L+ F + NL A+ +F
Sbjct: 33 LNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFL 92
Query: 71 HLT-TPNTYLYTAMITAYASQPAHASSAFSLYRDMVR-RGQPQPNQFIYPHVLKSCPDVL 128
+ T PN ++Y MI+A +S + F LY M+R R P F+Y ++K+ +
Sbjct: 93 NFTPNPNVFVYNTMISAVSSS---KNECFGLYSSMIRHRVSPDRQTFLY--LMKASSFLS 147
Query: 129 ESRGTKMVHTQIVKSG-FEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAM 187
E K +H I+ SG + +LV Y GN G+A K+F M +V S+ M
Sbjct: 148 E---VKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGN-FGVAEKVFARMPHPDVSSFNVM 203
Query: 188 ISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIR 247
I GY + G A L+ M VSD I
Sbjct: 204 IVGYAKQGFSLEALKLYFKM----------------------------------VSDGIE 229
Query: 248 PNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDS--FISNALIDMYGKCGSLKEAR 305
P++ T++ L GH ++LGK +HG++ R G S +SNAL+DMY KC A+
Sbjct: 230 PDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAK 289
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMR-----------------CQDH 348
RAFD KK + SWN+M+ F G E + VF++M + C
Sbjct: 290 RAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQR 349
Query: 349 NIR-------------PDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGC 395
+R PD VT +SL++ + G + GR L+ + +++
Sbjct: 350 TVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIR-LQLKGDAFLSSA 408
Query: 396 LVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIE--IDP 453
L+D+ + G E A V K E D +W S++ G +G A ++ E + P
Sbjct: 409 LIDMYCKCGIIERAFMVFK-TATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTP 467
Query: 454 NN 455
NN
Sbjct: 468 NN 469
>sp|Q9ZUT5|PP191_ARATH Pentatricopeptide repeat-containing protein At2g37310
OS=Arabidopsis thaliana GN=PCMP-E49 PE=2 SV=1
Length = 657
Score = 300 bits (769), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 279/514 (54%), Gaps = 12/514 (2%)
Query: 16 VLAILERCNHI---NHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHL 72
VL L C+ + +Q+ F+ G F ++ + T K N+ AR +FD +
Sbjct: 135 VLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYT-KCDNIESARKVFDEM 193
Query: 73 TTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRG 132
+ + + +MI+ Y SQ +Y+ M+ +PN V ++C +
Sbjct: 194 SERDVVSWNSMISGY-SQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIF 252
Query: 133 TKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYT 192
VH +++++ + + A++ Y++ G+ + AR LFDEMS+++ V++ A+ISGY
Sbjct: 253 GLEVHKKMIENHIQMDLSLCNAVIGFYAKCGS-LDYARALFDEMSEKDSVTYGAIISGYM 311
Query: 193 RVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVT 252
G +K A +LF M + WN++I+G QN + I+ FR M + RPN VT
Sbjct: 312 AHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREM---IRCGSRPNTVT 368
Query: 253 LVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNS 312
L L ++ ++ L+ GK IH + RNG D + +++ ++ID Y K G L A+R FD
Sbjct: 369 LSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK 428
Query: 313 KKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQ 372
+ L +W ++I ++A+HG S+++ +F++M Q +PD VT ++L+A H G +
Sbjct: 429 DRSLIAWTAIITAYAVHGDSDSACSLFDQM---QCLGTKPDDVTLTAVLSAFAHSGDSDM 485
Query: 373 GRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGC 432
+ F M Y IEP +EHY C+V +L RAG+ +A+E + M I+P VWG+LLNG
Sbjct: 486 AQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGA 545
Query: 433 KIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPG 492
+ G + A FA +L E++P N G ++AN+Y + G+W+E VR +K K PG
Sbjct: 546 SVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPG 605
Query: 493 CSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
SWIE +K + F + D + R++E+Y+ +E +V
Sbjct: 606 TSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLV 639
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 192/459 (41%), Gaps = 92/459 (20%)
Query: 28 HLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTPNTYLYTAMITAY 87
H+ QL + + NF A KL+ F T + A +FD +T N + Y A++ AY
Sbjct: 40 HVLQLHARIVVFSIKPDNFLASKLISFYT-RQDRFRQALHVFDEITVRNAFSYNALLIAY 98
Query: 88 ASQPAHASSAFSLYRDMV-----RRGQPQPNQFIYPHVLKS---CPDVLESRGTKMVHTQ 139
S+ + AFSL+ + +P+ VLK+ C D + VH
Sbjct: 99 TSREMYF-DAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGF 157
Query: 140 IVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKN 199
+++ GF+ V ++ Y++ N I ARK+FDEMS+R+VVSW +MISGY++ G ++
Sbjct: 158 VIRGGFDSDVFVGNGMITYYTKCDN-IESARKVFDEMSERDVVSWNSMISGYSQSGSFED 216
Query: 200 AASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSA 259
++ +M C+ + +PN VT++ A
Sbjct: 217 CKKMYKAM------------LACS---------------------DFKPNGVTVISVFQA 243
Query: 260 IGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKR---- 315
G + L G +H + N + +D + NA+I Y KCGSL AR FD S+K
Sbjct: 244 CGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTY 303
Query: 316 ---------------------------LTSWNSMINSFALHGQSENSICVFEEMMRCQDH 348
L++WN+MI+ + E I F EM+RC
Sbjct: 304 GAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGS- 362
Query: 349 NIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKT------YRIEPQIEHYGCLVDLLGR 402
RP+ VT SLL + T+ ++ G+ + Y I++Y L LLG
Sbjct: 363 --RPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGA 420
Query: 403 AGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
F+ + + W +++ ++G +D A
Sbjct: 421 QRVFDNCK--------DRSLIAWTAIITAYAVHGDSDSA 451
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 300 bits (768), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/504 (31%), Positives = 272/504 (53%), Gaps = 10/504 (1%)
Query: 17 LAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSN-LTYARFIFDHLTTP 75
+A+L+ ++Q+ + L G + + V+ L L YA I D P
Sbjct: 10 IALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKP 69
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQP-QPNQFIYPHVLKSCPDVLESRGTK 134
+ +MI A+ P S F YR ++ G +P+ + ++++C +
Sbjct: 70 TLFALNSMIRAHCKSPVPEKS-FDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGL 128
Query: 135 MVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRV 194
VH ++ GF+ P V+T L++ Y+ G + K+F+ + + V TAM++ R
Sbjct: 129 QVHGMTIRRGFDNDPHVQTGLISLYAELGC-LDSCHKVFNSIPCPDFVCRTAMVTACARC 187
Query: 195 GDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLV 254
GD+ A LF+ MP+RD AWN++I+G Q G +A++ F M +E ++ N V ++
Sbjct: 188 GDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE---GVKVNGVAMI 244
Query: 255 CALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKK 314
LSA G L G+ H Y+ RN + + ++ L+D+Y KCG +++A F +K
Sbjct: 245 SVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEK 304
Query: 315 RLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGR 374
+ +W+S +N A++G E + +F M + + P+ VTF+S+L C+ G V++G+
Sbjct: 305 NVYTWSSALNGLAMNGFGEKCLELFSLM---KQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 361
Query: 375 AYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKI 434
+F M + IEPQ+EHYGCLVDL RAGR E+A+ +++ M ++P VW SLL+ ++
Sbjct: 362 RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRM 421
Query: 435 YGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCS 494
Y + A KK++E++ N G ++L+NIY + WD V VR+ +K + K PGCS
Sbjct: 422 YKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCS 481
Query: 495 WIEVDKQVHQFHSLDKTHPRTEEI 518
+EV+ +VH+F DK+HP+ +I
Sbjct: 482 VMEVNGEVHEFFVGDKSHPKYTQI 505
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 271/528 (51%), Gaps = 65/528 (12%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + AR +FD + N +TA++ Y A SL+ M P+ N+
Sbjct: 90 MKNGEIDEARKVFDLMPERNVVSWTALVKGYVHN-GKVDVAESLFWKM-----PEKNKVS 143
Query: 117 YPHVL----------KSC------PDVLESRGTKMVH-----------TQIVKSGFEQYP 149
+ +L +C PD T M+H +I E+
Sbjct: 144 WTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV 203
Query: 150 VVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPD 209
+ T +V Y ++ N + ARK+FD M ++ VSWT+M+ GY + G I++A LF+ MP
Sbjct: 204 ITWTTMVTGYGQN-NRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPV 262
Query: 210 RDVPAWNSVIAGCTQNGLFSDA------------------ISFFRRMGMEVS-------- 243
+ V A N++I+G Q G + A I R G E+
Sbjct: 263 KPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILM 322
Query: 244 --DNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSL 301
+RP TL+ LS L GK +H + R D+D ++++ L+ MY KCG L
Sbjct: 323 QKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGEL 382
Query: 302 KEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLL 361
+++ FDR K + WNS+I+ +A HG E ++ VF EM + +P+ VTF++ L
Sbjct: 383 VKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMP--LSGSTKPNEVTFVATL 440
Query: 362 NACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPD 421
+AC++ G+VE+G ++ M + ++P HY C+VD+LGRAGRF EA+E++ M +EPD
Sbjct: 441 SACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPD 500
Query: 422 EVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKM 481
VWGSLL C+ + + D AEF KKLIEI+P N G I+L+N+Y G+W +V ++RK+
Sbjct: 501 AAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKL 560
Query: 482 LKDRNAYKTPGCSWIEVDKQVHQF-HSLDKTHPRTEEIYDALESMVAL 528
+K R K+PGCSW EV+ +VH F +HP E I L+ + L
Sbjct: 561 MKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGL 608
Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 134/273 (49%), Gaps = 29/273 (10%)
Query: 169 ARKLFDEMSDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLF 228
ARKLFDEM DRN++SW ++SGY + G+I A +FD MP+R+V +W +++ G NG
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 229 SDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHG-YVYRNGLDLDSFI 287
A S F +M N+V+ L G LQ G++ +Y D D+
Sbjct: 127 DVAESLFWKMP-------EKNKVSWTVML-----IGFLQDGRIDDACKLYEMIPDKDNIA 174
Query: 288 SNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQD 347
++I K G + EAR FD S++ + +W +M+ + + + +++ +F+ M +
Sbjct: 175 RTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE 234
Query: 348 HNIRPDGVTFISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFE 407
V++ S+L G +E F++M ++P I ++ LG+ G
Sbjct: 235 -------VSWTSMLMGYVQNGRIEDAEELFEVMP----VKPVIA-CNAMISGLGQKGEIA 282
Query: 408 EALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDF 440
+A V MK E ++ W +++ KI+ R F
Sbjct: 283 KARRVFDSMK-ERNDASWQTVI---KIHERNGF 311
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 79/208 (37%), Gaps = 34/208 (16%)
Query: 16 VLAILERCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLSNLTYARFIFDHLTTP 75
+L++ ++H KQ+ + L Q + Y ++ +K L ++ IFD +
Sbjct: 337 ILSVCASLASLHHGKQVHAQLVRC-QFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK 395
Query: 76 NTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKM 135
+ ++ ++I+ YAS A ++ +M G +PN+ + L +C
Sbjct: 396 DIIMWNSIISGYASH-GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS---------- 444
Query: 136 VHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVG 195
+ +V+ G + Y +E+ G+ + M+ R G
Sbjct: 445 -YAGMVEEGLKIYESMESVF-----------GVKPI---------TAHYACMVDMLGRAG 483
Query: 196 DIKNAASLFDSMP-DRDVPAWNSVIAGC 222
A + DSM + D W S++ C
Sbjct: 484 RFNEAMEMIDSMTVEPDAAVWGSLLGAC 511
>sp|P0C8Q7|PP369_ARATH Pentatricopeptide repeat-containing protein At5g08305
OS=Arabidopsis thaliana GN=PCMP-E105 PE=2 SV=1
Length = 534
Score = 298 bits (764), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 173/505 (34%), Positives = 280/505 (55%), Gaps = 12/505 (2%)
Query: 22 RCNHINHLKQLQSFLTTLGQSQTNFYAFKLVRFCTLKLS-NLTYARFIFDHLTTPNTYLY 80
+C ++ L ++ + L TLG S+ + + + F L S ++ YA L+ P Y +
Sbjct: 17 QCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGW 76
Query: 81 TAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFIYPHVLKSCPDVLESRGTKMVHTQI 140
+I + S + + S+Y M+R G P+ YP ++KS + + +H +
Sbjct: 77 NFVIRGF-SNSRNPEKSISVYIQMLRFGL-LPDHMTYPFLMKSSSRLSNRKLGGSLHCSV 134
Query: 141 VKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEMSDRNVVSWTAMISGYTRVGDIKNA 200
VKSG E + L++ Y S D ARKLFDEM +N+V+W +++ Y + GD+ +A
Sbjct: 135 VKSGLEWDLFICNTLIHMYG-SFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSA 193
Query: 201 ASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAI 260
+FD M +RDV W+S+I G + G ++ A+ F +M M + + + N+VT+V + A
Sbjct: 194 RLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQM-MRMGSS-KANEVTMVSVICAC 251
Query: 261 GHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTS-- 318
H G L GK +H Y+ L L + +LIDMY KCGS+ +A F R S K +
Sbjct: 252 AHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALM 311
Query: 319 WNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACTHGGLVEQGRAYFK 378
WN++I A HG S+ +F +M ++ I PD +TF+ LL AC+HGGLV++ +FK
Sbjct: 312 WNAIIGGLASHGFIRESLQLFHKM---RESKIDPDEITFLCLLAACSHGGLVKEAWHFFK 368
Query: 379 LMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRT 438
+ K EP+ EHY C+VD+L RAG ++A + + M I+P + G+LLNGC +G
Sbjct: 369 SL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNL 427
Query: 439 DFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEV 498
+ AE KKLIE+ P+N G + LAN+Y ++ R +R+ ++ + K G S +++
Sbjct: 428 ELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDL 487
Query: 499 DKQVHQFHSLDKTHPRTEEIYDALE 523
D H+F + DKTH +++IY L+
Sbjct: 488 DGTRHRFIAHDKTHFHSDKIYAVLQ 512
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 298 bits (763), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 255/470 (54%), Gaps = 45/470 (9%)
Query: 57 LKLSNLTYARFIFDHLTTPNTYLYTAMITAYASQPAHASSAFSLYRDMVRRGQPQPNQFI 116
+K + L A +FD + N +T MI+AY+ H A L M+R +PN +
Sbjct: 107 VKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIH-QKALELLVLMLR-DNVRPNVYT 164
Query: 117 YPHVLKSCPDVLESRGTKMVHTQIVKSGFEQYPVVETALVNSYSRSGNDIGIARKLFDEM 176
Y VL+SC + + R M+H I+K G E V +AL++ +++
Sbjct: 165 YSSVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAK--------------- 206
Query: 177 SDRNVVSWTAMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFR 236
+G+ ++A S+FD M D WNS+I G QN A+ F+
Sbjct: 207 -----------------LGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFK 249
Query: 237 RMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYG 296
RM Q TL L A +L+LG H ++ + D D ++NAL+DMY
Sbjct: 250 RMK---RAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYC 304
Query: 297 KCGSLKEARRAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVT 356
KCGSL++A R F++ ++ + +W++MI+ A +G S+ ++ +FE M + +P+ +T
Sbjct: 305 KCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM---KSSGTKPNYIT 361
Query: 357 FISLLNACTHGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGM 416
+ +L AC+H GL+E G YF+ M K Y I+P EHYGC++DLLG+AG+ ++A++++ M
Sbjct: 362 IVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM 421
Query: 417 KIEPDEVVWGSLLNGCKIYGRTDFAEFAVKKLIEIDPNNGGYGIMLANIYGELGKWDEVR 476
+ EPD V W +LL C++ AE+A KK+I +DP + G +L+NIY KWD V
Sbjct: 422 ECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVE 481
Query: 477 KVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTHPRTEEIYDALESMV 526
++R ++DR K PGCSWIEV+KQ+H F D +HP+ E+ L ++
Sbjct: 482 EIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLI 531
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 151/331 (45%), Gaps = 52/331 (15%)
Query: 186 AMISGYTRVGDIKNAASLFDSMPDRDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDN 245
+I+ Y + + +A LFD MP R+V +W ++I+ ++ + A+ M + DN
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLM---LRDN 157
Query: 246 IRPNQVTLVCALSAIGHTGMLQLGKVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEAR 305
+RPN T L + GM + +++H + + GL+ D F+ +ALID++ K G ++A
Sbjct: 158 VRPNVYTYSSVLRSC--NGMSDV-RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214
Query: 306 RAFDRNSKKRLTSWNSMINSFALHGQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT 365
FD WNS+I FA + +S+ ++ +F+ M R + T S+L ACT
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRA---GFIAEQATLTSVLRACT 271
Query: 366 HGGLVEQGRAYFKLMTKTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVW 425
L+E G + + + + LVD+ + G E+AL V MK E D + W
Sbjct: 272 GLALLELG---MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITW 327
Query: 426 GSLLNG----------CKIYGRTDFAE------------FA----------------VKK 447
++++G K++ R + FA +KK
Sbjct: 328 STMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK 387
Query: 448 LIEIDPNNGGYGIMLANIYGELGKWDEVRKV 478
L IDP YG M+ ++ G+ GK D+ K+
Sbjct: 388 LYGIDPVREHYGCMI-DLLGKAGKLDDAVKL 417
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 43/247 (17%)
Query: 210 RDVPAWNSVIAGCTQNGLFSDAISFFRRMGMEVSDNIRPNQVTLVCALSAIGHTGMLQLG 269
RD+P + +GL++D+ ++ +++ C + H G L
Sbjct: 40 RDLPRAMKAMDSLQSHGLWADSATY--------------SELIKCCISNRAVHEGNL--- 82
Query: 270 KVIHGYVYRNGLDLDSFISNALIDMYGKCGSLKEARRAFDRNSKKRLTSWNSMINSFALH 329
I ++Y NG F+ N LI+MY K L +A + FD+ ++ + SW +MI++++
Sbjct: 83 --ICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKC 140
Query: 330 GQSENSICVFEEMMRCQDHNIRPDGVTFISLLNACT--------HGGLVEQGRAYFKLMT 381
+ ++ + M+R N+RP+ T+ S+L +C H G++++G
Sbjct: 141 KIHQKALELLVLMLR---DNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEG-------- 189
Query: 382 KTYRIEPQIEHYGCLVDLLGRAGRFEEALEVVKGMKIEPDEVVWGSLLNGCKIYGRTDFA 441
+E + L+D+ + G E+AL V M + D +VW S++ G R+D A
Sbjct: 190 ----LESDVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVA 244
Query: 442 EFAVKKL 448
K++
Sbjct: 245 LELFKRM 251
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191,487,079
Number of Sequences: 539616
Number of extensions: 7961759
Number of successful extensions: 23750
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 192
Number of HSP's that attempted gapping in prelim test: 17857
Number of HSP's gapped (non-prelim): 1752
length of query: 529
length of database: 191,569,459
effective HSP length: 122
effective length of query: 407
effective length of database: 125,736,307
effective search space: 51174676949
effective search space used: 51174676949
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)