Query 009664
Match_columns 529
No_of_seqs 412 out of 2816
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 10:16:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009664.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009664hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 2.6E-33 8.8E-38 275.0 23.6 241 257-509 14-273 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 3E-32 1E-36 268.6 8.7 240 257-509 15-276 (296)
3 1wfj_A Putative elicitor-respo 99.9 1.3E-21 4.4E-26 169.5 14.7 125 259-393 7-133 (136)
4 2dmh_A Myoferlin; beta-sandwic 99.9 3.6E-21 1.2E-25 167.5 15.9 129 259-392 4-135 (140)
5 3b7y_A E3 ubiquitin-protein li 99.9 4.6E-21 1.6E-25 169.5 16.1 129 258-390 16-153 (153)
6 1rlw_A Phospholipase A2, CALB 99.9 5.2E-21 1.8E-25 163.3 13.8 120 261-389 2-124 (126)
7 2ep6_A MCTP2 protein; beta san 99.9 5.4E-21 1.9E-25 164.8 13.1 124 257-389 8-131 (133)
8 2fk9_A Protein kinase C, ETA t 99.8 3.8E-21 1.3E-25 169.0 11.7 117 259-389 26-156 (157)
9 3kwu_A MUNC13-1; calcium bindi 99.8 3.5E-20 1.2E-24 162.9 17.5 122 259-389 14-146 (148)
10 3m7f_B E3 ubiquitin-protein li 99.8 3.7E-20 1.3E-24 167.6 16.7 129 259-391 5-142 (176)
11 1gmi_A Protein kinase C, epsil 99.8 2.6E-20 8.9E-25 161.2 13.2 118 260-391 4-134 (136)
12 3pyc_A E3 ubiquitin-protein li 99.8 1.8E-19 6.1E-24 155.1 14.2 125 260-388 3-131 (132)
13 3f04_A Synaptotagmin-1; C2A, c 99.8 1.3E-19 4.5E-24 158.2 12.4 112 257-368 29-142 (143)
14 2d8k_A Synaptotagmin VII; exoc 99.8 1.5E-19 5E-24 157.5 12.6 112 258-369 22-136 (141)
15 1rsy_A Synaptotagmin I; calciu 99.8 2.1E-19 7.3E-24 158.5 13.3 112 257-368 37-150 (152)
16 2z0u_A WW domain-containing pr 99.8 5.2E-20 1.8E-24 162.4 7.9 111 257-367 38-154 (155)
17 2b3r_A Phosphatidylinositol-4- 99.8 4.2E-19 1.4E-23 153.0 13.5 109 259-368 17-130 (134)
18 2nq3_A Itchy homolog E3 ubiqui 99.8 8.6E-19 2.9E-23 157.5 15.1 126 259-392 33-163 (173)
19 2bwq_A Regulating synaptic mem 99.8 1E-18 3.5E-23 149.6 11.3 110 257-367 13-129 (129)
20 1ugk_A Synaptotagmin IV, KIAA1 99.8 3E-18 1E-22 148.6 13.7 112 257-368 17-133 (138)
21 3fdw_A Synaptotagmin-like prot 99.8 6.9E-19 2.4E-23 154.5 9.3 113 257-369 18-135 (148)
22 1wfm_A Synaptotagmin XIII; C2 99.8 2.2E-18 7.6E-23 149.3 12.3 109 257-368 21-132 (138)
23 1v27_A Regulating synaptic mem 99.8 1.2E-18 4.1E-23 151.7 10.0 111 258-369 17-134 (141)
24 2dmg_A KIAA1228 protein; beta- 99.8 1.1E-18 3.8E-23 152.1 9.8 111 258-369 20-136 (142)
25 2enp_A B/K protein; C2 type 1, 99.8 1E-18 3.5E-23 153.3 9.5 112 257-368 21-141 (147)
26 2chd_A Rabphilin-3A, exophilin 99.8 2.6E-18 8.9E-23 149.7 11.5 111 258-368 25-140 (142)
27 1a25_A CALB, protein kinase C 99.8 4.9E-18 1.7E-22 149.2 12.8 108 260-368 29-139 (149)
28 3rdl_A Protein kinase C alpha 99.8 3.3E-18 1.1E-22 148.1 11.4 109 260-369 14-125 (137)
29 1rh8_A Piccolo protein; beta-s 99.8 7.2E-19 2.5E-23 153.3 6.5 108 261-368 17-138 (142)
30 2q3x_A Regulating synaptic mem 99.7 3.8E-18 1.3E-22 153.4 11.2 109 260-369 28-140 (171)
31 3fbk_A RGS3, RGP3, regulator o 99.7 7.8E-18 2.7E-22 148.6 12.1 111 257-369 22-138 (153)
32 1tjx_A Similar to synaptotagmi 99.7 1.6E-17 5.4E-22 147.7 13.2 113 257-369 20-148 (159)
33 3n5a_A Synaptotagmin-7; calciu 99.7 1.6E-17 5.4E-22 143.9 11.6 98 257-354 11-112 (138)
34 2cm5_A Rabphilin-3A; protein t 99.7 4.8E-17 1.6E-21 145.6 13.7 98 257-354 32-133 (166)
35 1w15_A Synaptotagmin IV; metal 99.7 3.7E-17 1.3E-21 144.3 11.9 109 257-367 25-137 (153)
36 2cjt_A UNC-13 homolog A, MUNC1 99.7 2.2E-16 7.6E-21 135.0 13.1 118 260-388 3-130 (131)
37 3l9b_A Otoferlin; C2-domain, b 99.7 3.1E-16 1.1E-20 131.9 12.3 119 262-392 21-142 (144)
38 3jzy_A Intersectin 2; C2 domai 99.7 2.1E-16 7.2E-21 167.5 13.4 120 259-389 384-507 (510)
39 3nsj_A Perforin-1; pore formin 99.7 4.6E-15 1.6E-19 155.3 21.9 173 197-389 309-503 (540)
40 1wfm_A Synaptotagmin XIII; C2 99.6 6.3E-16 2.1E-20 133.8 10.8 124 375-510 8-134 (138)
41 1rlw_A Phospholipase A2, CALB 99.6 1.3E-15 4.6E-20 129.5 10.6 102 419-522 24-125 (126)
42 2fk9_A Protein kinase C, ETA t 99.6 1.3E-15 4.6E-20 133.6 10.4 94 420-521 58-156 (157)
43 2cjs_A UNC-13 homolog A, MUNC1 99.6 4.6E-15 1.6E-19 132.1 13.0 88 259-356 11-99 (167)
44 2dmh_A Myoferlin; beta-sandwic 99.6 8.6E-15 2.9E-19 127.0 14.2 100 420-524 25-135 (140)
45 1cjy_A CPLA2, protein (cytosol 99.6 1.2E-15 4.3E-20 164.3 9.7 111 257-368 13-126 (749)
46 1v27_A Regulating synaptic mem 99.6 5.1E-16 1.7E-20 134.9 5.0 127 376-513 4-138 (141)
47 3fdw_A Synaptotagmin-like prot 99.6 8.1E-16 2.8E-20 134.8 6.0 125 375-509 5-135 (148)
48 3fbk_A RGS3, RGP3, regulator o 99.6 2.1E-15 7.3E-20 132.9 8.4 127 375-512 9-141 (153)
49 3rdl_A Protein kinase C alpha 99.6 1.2E-15 4.1E-20 131.8 6.2 123 378-513 3-129 (137)
50 2r83_A Synaptotagmin-1; C2A-C2 99.6 1.3E-14 4.3E-19 141.7 13.7 111 259-369 147-273 (284)
51 2bwq_A Regulating synaptic mem 99.6 2E-15 6.8E-20 129.0 7.0 119 378-507 3-129 (129)
52 1a25_A CALB, protein kinase C 99.6 9.3E-16 3.2E-20 134.6 4.4 126 376-514 16-145 (149)
53 2z0u_A WW domain-containing pr 99.6 1.7E-15 5.8E-20 133.4 5.7 122 376-507 26-154 (155)
54 2b3r_A Phosphatidylinositol-4- 99.6 5.7E-15 1.9E-19 127.0 8.7 95 418-512 36-134 (134)
55 2d8k_A Synaptotagmin VII; exoc 99.6 7.4E-15 2.5E-19 127.5 9.5 123 376-510 9-137 (141)
56 1rsy_A Synaptotagmin I; calciu 99.6 8.7E-15 3E-19 128.8 9.9 122 376-509 25-151 (152)
57 1wfj_A Putative elicitor-respo 99.6 1.2E-14 4.3E-19 125.2 10.1 101 419-525 28-133 (136)
58 3b7y_A E3 ubiquitin-protein li 99.6 1.7E-14 5.8E-19 127.1 10.9 103 419-522 38-153 (153)
59 1gmi_A Protein kinase C, epsil 99.5 2.4E-14 8.4E-19 123.4 11.6 95 420-522 36-133 (136)
60 3f04_A Synaptotagmin-1; C2A, c 99.5 1.5E-14 5.2E-19 125.9 9.5 121 376-508 17-142 (143)
61 1djx_A PLC-D1, phosphoinositid 99.5 5.5E-14 1.9E-18 150.5 15.6 124 260-389 495-623 (624)
62 2dmg_A KIAA1228 protein; beta- 99.5 5E-15 1.7E-19 128.8 6.0 125 375-510 6-137 (142)
63 3kwu_A MUNC13-1; calcium bindi 99.5 5.3E-14 1.8E-18 123.2 12.1 97 418-522 34-147 (148)
64 2enp_A B/K protein; C2 type 1, 99.5 1.8E-14 6.3E-19 126.0 8.6 123 375-509 8-142 (147)
65 1tjx_A Similar to synaptotagmi 99.5 2E-14 6.9E-19 127.5 7.6 126 376-511 8-150 (159)
66 3m7f_B E3 ubiquitin-protein li 99.5 1.7E-13 5.8E-18 123.6 13.3 104 419-523 26-142 (176)
67 3n5a_A Synaptotagmin-7; calciu 99.5 2.7E-14 9.3E-19 123.4 7.4 117 379-507 2-123 (138)
68 2q3x_A Regulating synaptic mem 99.5 1.8E-14 6.1E-19 129.4 6.4 121 376-509 15-140 (171)
69 2ep6_A MCTP2 protein; beta san 99.5 3.3E-14 1.1E-18 122.0 7.7 97 418-522 30-132 (133)
70 1rh8_A Piccolo protein; beta-s 99.5 3.5E-15 1.2E-19 129.8 1.1 123 376-510 3-140 (142)
71 1dqv_A Synaptotagmin III; beta 99.5 7.2E-15 2.4E-19 144.3 2.7 97 258-354 148-248 (296)
72 2chd_A Rabphilin-3A, exophilin 99.5 3.7E-14 1.3E-18 123.2 6.9 124 375-508 11-140 (142)
73 1w15_A Synaptotagmin IV; metal 99.5 5.3E-14 1.8E-18 123.9 7.5 121 376-508 13-138 (153)
74 1ugk_A Synaptotagmin IV, KIAA1 99.5 2.1E-13 7E-18 117.9 10.5 123 375-509 4-134 (138)
75 2cm5_A Rabphilin-3A; protein t 99.5 1.4E-13 4.9E-18 122.9 9.7 109 376-494 20-133 (166)
76 3bxj_A RAS GTPase-activating p 99.5 5.5E-15 1.9E-19 154.3 -0.3 127 258-392 7-159 (483)
77 3pyc_A E3 ubiquitin-protein li 99.5 1.5E-13 5.1E-18 117.8 8.7 99 418-521 22-132 (132)
78 2nq3_A Itchy homolog E3 ubiqui 99.4 5.7E-13 1.9E-17 119.4 8.5 97 421-524 56-163 (173)
79 3pfq_A PKC-B, PKC-beta, protei 99.3 4.3E-12 1.5E-16 138.5 9.3 109 260-369 170-281 (674)
80 3l9b_A Otoferlin; C2-domain, b 99.3 1.7E-11 5.8E-16 103.1 9.6 100 420-524 35-142 (144)
81 3jzy_A Intersectin 2; C2 domai 99.3 8.6E-12 2.9E-16 132.0 9.4 100 417-521 403-507 (510)
82 2cjt_A UNC-13 homolog A, MUNC1 99.2 5.8E-11 2E-15 101.2 9.1 79 419-506 20-102 (131)
83 3ohm_B 1-phosphatidylinositol- 99.2 1.8E-10 6.2E-15 126.3 13.8 116 262-391 725-846 (885)
84 2zkm_X 1-phosphatidylinositol- 99.2 2.5E-10 8.5E-15 125.2 14.7 116 260-389 676-798 (799)
85 3qr0_A Phospholipase C-beta (P 99.1 2.8E-10 9.5E-15 124.2 14.6 117 261-391 649-772 (816)
86 3nsj_A Perforin-1; pore formin 99.1 4.8E-10 1.6E-14 117.4 13.0 93 417-521 409-503 (540)
87 2cjs_A UNC-13 homolog A, MUNC1 99.1 3.8E-10 1.3E-14 100.2 9.5 71 419-498 29-101 (167)
88 1yrk_A NPKC-delta, protein kin 99.1 3E-09 1E-13 86.7 13.4 113 261-389 5-124 (126)
89 1djx_A PLC-D1, phosphoinositid 99.0 1.3E-09 4.6E-14 116.6 10.8 100 419-521 517-623 (624)
90 1cjy_A CPLA2, protein (cytosol 99.0 4.2E-10 1.4E-14 121.5 6.6 94 419-516 39-132 (749)
91 2enj_A NPKC-theta, protein kin 98.9 4.4E-09 1.5E-13 86.8 10.1 114 260-389 8-129 (138)
92 3bxj_A RAS GTPase-activating p 98.9 1.2E-10 4.1E-15 121.5 0.7 97 423-524 28-159 (483)
93 3pfq_A PKC-B, PKC-beta, protei 98.9 1.4E-09 4.7E-14 118.7 6.6 95 416-511 187-283 (674)
94 1yrk_A NPKC-delta, protein kin 98.7 1.8E-07 6.1E-12 76.3 11.3 93 421-521 26-124 (126)
95 2enj_A NPKC-theta, protein kin 98.5 4.3E-07 1.5E-11 75.0 9.7 94 421-522 31-130 (138)
96 3ohm_B 1-phosphatidylinositol- 98.5 2.8E-07 9.7E-12 101.2 9.9 96 421-522 741-845 (885)
97 2zkm_X 1-phosphatidylinositol- 98.5 4.2E-07 1.4E-11 99.7 11.0 95 421-521 694-798 (799)
98 3qr0_A Phospholipase C-beta (P 98.4 5.6E-07 1.9E-11 98.3 10.9 95 421-521 666-770 (816)
99 3l4c_A Dedicator of cytokinesi 92.6 2.4 8.1E-05 38.2 13.2 54 298-351 78-137 (220)
100 2yrb_A Protein fantom; beta sa 90.2 3.2 0.00011 35.2 10.9 125 259-390 15-150 (156)
101 2wxf_A Phosphatidylinositol-4, 81.7 6.3 0.00022 43.7 10.6 90 261-353 216-323 (940)
102 2yrb_A Protein fantom; beta sa 78.7 14 0.00047 31.3 9.4 88 433-522 49-150 (156)
103 3l4c_A Dedicator of cytokinesi 73.8 9.7 0.00033 34.2 7.6 56 438-493 77-139 (220)
104 3hhm_A Phosphatidylinositol-4, 71.8 27 0.00091 39.3 12.0 92 261-354 354-455 (1091)
105 1e7u_A Phosphatidylinositol 3- 59.9 10 0.00035 42.1 5.9 56 440-495 256-331 (961)
106 1e7u_A Phosphatidylinositol 3- 58.2 37 0.0013 37.7 9.9 92 262-354 218-330 (961)
107 2y3a_A Phosphatidylinositol-4, 55.5 11 0.00038 42.4 5.2 73 261-336 352-430 (1092)
108 3hhm_A Phosphatidylinositol-4, 51.4 25 0.00085 39.5 7.1 71 424-495 377-456 (1091)
109 2wxf_A Phosphatidylinositol-4, 51.4 23 0.0008 39.2 6.9 55 440-494 254-324 (940)
110 1ewf_A BPI, bactericidal/perme 29.3 4.3E+02 0.015 26.1 12.6 20 164-183 103-122 (456)
111 2y3a_A Phosphatidylinositol-4, 28.1 49 0.0017 37.2 4.8 55 440-494 390-470 (1092)
112 2k1k_A Ephrin type-A receptor 27.5 4.9 0.00017 25.1 -1.9 14 4-17 13-26 (38)
113 2zt9_E Cytochrome B6-F complex 21.7 26 0.00088 20.7 0.5 11 4-14 14-24 (31)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=2.6e-33 Score=274.99 Aligned_cols=241 Identities=24% Similarity=0.371 Sum_probs=193.1
Q ss_pred ccCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEEEecC--CCCEEEEEEEE
Q 009664 257 ELKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYD 334 (529)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~l~i~v~d 334 (529)
+....|.|+|+|++|++|+.+|..|.+||||++++.+...+.++|+++++++||.|||+|.|.+... ..+.|.|+|||
T Consensus 14 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d 93 (284)
T 2r83_A 14 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYD 93 (284)
T ss_dssp EETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEE
Confidence 3457899999999999999999999999999999987666789999999999999999999998643 45799999999
Q ss_pred CCCCCCCceeEEEEEECcccCCCceeeEEEEcccccccccCCccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhh--h
Q 009664 335 DEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLE--K 412 (529)
Q Consensus 335 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~--~ 412 (529)
++.+++|++||++.++|.++..+...+.|++|.+... ......|+|++++.|.|.. ..+.+..++ .
T Consensus 94 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~--~~~~~~G~i~l~l~~~p~~----------~~l~v~v~~a~~ 161 (284)
T 2r83_A 94 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEK--EEQEKLGDICFSLRYVPTA----------GKLTVVILEAKN 161 (284)
T ss_dssp CCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSS--CCCCCCCEEEEEEEEETTT----------TEEEEEEEEEES
T ss_pred CCCCCCCceeEEEEEcchhcccCCcceeEEEeecccc--ccccccccEEEEEEecCcC----------CceEEEEEEeEC
Confidence 9999999999999999999988888899999975321 1234679999999998643 122222222 2
Q ss_pred hhhcCCcccCCCceEEEEEEEccCCeeEeeecccCCCCCccCceEEEEeecC--CCCEEEEEEEECCCCCC-CeeEEEEE
Q 009664 413 VLTNGEKALKSGANGTEAIELEKDASQKRREVVNDCLNPIWNQTFDFVVEDG--LHDMLIAEVWDHDTFGK-DYMGRCIL 489 (529)
Q Consensus 413 ~~~~~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~~L~i~V~D~~~~~~-d~lG~~~i 489 (529)
+...+..+.++||+++++...+....++||+++++|.||+|||.|.|.+... ....|.|+|||++.+++ ++||++.+
T Consensus 162 L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i 241 (284)
T 2r83_A 162 LKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFV 241 (284)
T ss_dssp CCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEE
T ss_pred CCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEE
Confidence 2233445678899999976533333578999999999999999999999643 24579999999999876 89999999
Q ss_pred eccccc----------c--cceeeeEEEcCCC
Q 009664 490 TLTRVI----------L--EGEYTDCFELDGT 509 (529)
Q Consensus 490 ~L~~l~----------~--~~~~~~w~~L~~~ 509 (529)
+++.+. . +....+||+|.+.
T Consensus 242 ~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 242 GYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp ETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred CCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 998632 1 2345899999874
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.97 E-value=3e-32 Score=268.60 Aligned_cols=240 Identities=23% Similarity=0.337 Sum_probs=186.4
Q ss_pred ccCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEEEecC--CCCEEEEEEEE
Q 009664 257 ELKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYD 334 (529)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~l~i~v~d 334 (529)
+....|.|+|+|++|++|+.+|..|.+||||++++.+.+.+.++|+++++++||.|||+|.|.+... ....|.|+|||
T Consensus 15 y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d 94 (296)
T 1dqv_A 15 YLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYD 94 (296)
T ss_dssp CCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEE
Confidence 4467899999999999999999999999999999976667789999999999999999999998543 34589999999
Q ss_pred CCCCCCCceeEEEEEE-CcccCC-CceeeEEEEcccccccccCCccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhh-
Q 009664 335 DEGIQSSELIGCAQVR-LCELEP-GKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLE- 411 (529)
Q Consensus 335 ~~~~~~d~~lG~~~i~-l~~l~~-~~~~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~- 411 (529)
+|.+++|++||++.++ +.++.. ......|+.|.... ......|+|++++.|.|.. ..+.+..++
T Consensus 95 ~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~---~~~~~~G~i~vsl~y~~~~----------~~l~v~v~~a 161 (296)
T 1dqv_A 95 FDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGG---SEKADLGELNFSLCYLPTA----------GLLTVTIIKA 161 (296)
T ss_dssp CCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCS---SCCSCCCEEEEEEEEETTT----------TEEEEEEEEE
T ss_pred cCCCCCCceEEEEEeccccccccCCccceeeecccccc---ccccccceEEEEEEecccc----------ceeEEEEEEe
Confidence 9999999999999996 444432 34457899986532 2345679999999998643 222222222
Q ss_pred -hhhhcCCcccCCCceEEEEEEEccCCeeEeeecccCCCCCccCceEEEEeecC--CCCEEEEEEEECCCCCC-CeeEEE
Q 009664 412 -KVLTNGEKALKSGANGTEAIELEKDASQKRREVVNDCLNPIWNQTFDFVVEDG--LHDMLIAEVWDHDTFGK-DYMGRC 487 (529)
Q Consensus 412 -~~~~~~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~~L~i~V~D~~~~~~-d~lG~~ 487 (529)
.+...+..+.+++|+++++........++||+++++|.||+|||.|.|.+... ....|.|+|||++.+++ ++||++
T Consensus 162 ~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~ 241 (296)
T 1dqv_A 162 SNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVC 241 (296)
T ss_dssp ESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEEC
T ss_pred ecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEE
Confidence 22233445677899998864322234678999999999999999999998743 35679999999999876 899999
Q ss_pred EEecccccc-------------cceeeeEEEcCCC
Q 009664 488 ILTLTRVIL-------------EGEYTDCFELDGT 509 (529)
Q Consensus 488 ~i~L~~l~~-------------~~~~~~w~~L~~~ 509 (529)
.|+++++.. +....+|++|.+.
T Consensus 242 ~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 242 RVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp CCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred EECCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 999997643 2235788888754
No 3
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.87 E-value=1.3e-21 Score=169.50 Aligned_cols=125 Identities=34% Similarity=0.586 Sum_probs=111.9
Q ss_pred CcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCCeEeccccC-CCCCCeeccEEEEEEecCCCCEEEEEEEECCC
Q 009664 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTIN-NDLNPIWNEHFEFIVEDESTQHLVVRIYDDEG 337 (529)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~-~t~nP~Wne~f~~~v~~~~~~~l~i~v~d~~~ 337 (529)
.+.|.|+|+|++|++|+..+..|.+||||++++. ++.++|++++ ++.||.|||+|.|.+.+ ..+.|.|+|||++.
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~---~~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~ 82 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCR---TQDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDV 82 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESS---SCEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSS
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEEC---CccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCC
Confidence 5789999999999999999988999999999997 5678999998 89999999999999987 45699999999999
Q ss_pred CCCCceeEEEEEECccc-CCCceeeEEEEcccccccccCCccccEEEEEEEEEEccc
Q 009664 338 IQSSELIGCAQVRLCEL-EPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYCPFGM 393 (529)
Q Consensus 338 ~~~d~~lG~~~i~l~~l-~~~~~~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~p~~~ 393 (529)
+++|++||++.++|.++ ..+.....|++|.+ +.+..|+|++++.|.|...
T Consensus 83 ~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~------~~~~~G~i~l~l~~~p~~~ 133 (136)
T 1wfj_A 83 GTEDDAVGEATIPLEPVFVEGSIPPTAYNVVK------DEEYKGEIWVALSFKPSGP 133 (136)
T ss_dssp CTTTCCSEEEEEESHHHHHHSEEEEEEEEEEE------TTEEEEEEEEEEEEEECCS
T ss_pred CCCCceEEEEEEEHHHhccCCCCCcEEEEeec------CCccCEEEEEEEEEEeCCC
Confidence 99999999999999998 55666789999962 4578899999999998753
No 4
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=3.6e-21 Score=167.55 Aligned_cols=129 Identities=29% Similarity=0.472 Sum_probs=110.5
Q ss_pred CcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEEEecC---CCCEEEEEEEEC
Q 009664 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE---STQHLVVRIYDD 335 (529)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~---~~~~l~i~v~d~ 335 (529)
...|.|+|+|++|++|+.++. |.+||||++++. +++++|+++++++||+|||+|.|.+... ....|.|+|||+
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~ 79 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFK---DEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDF 79 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECS---SCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEET
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEEC---CEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEEC
Confidence 457999999999999999998 999999999997 5689999999999999999999998653 357899999999
Q ss_pred CCCCCCceeEEEEEECcccCCCceeeEEEEcccccccccCCccccEEEEEEEEEEcc
Q 009664 336 EGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYCPFG 392 (529)
Q Consensus 336 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~p~~ 392 (529)
+.+++|++||++.+++.++..+...+.|+.+.+-.. .......|+|++++.|.|..
T Consensus 80 d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~-~~~~~~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 80 ETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLN-EKGQDTGATIDLVIGYDPPS 135 (140)
T ss_dssp TCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEEC-TTCCEEEEEEEEEEEECCCB
T ss_pred CCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccC-CCCCCCCCEEEEEEEEECCC
Confidence 999999999999999999988888899998322111 12335679999999999754
No 5
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.86 E-value=4.6e-21 Score=169.54 Aligned_cols=129 Identities=25% Similarity=0.474 Sum_probs=104.3
Q ss_pred cCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCC---CeEeccccCCCCCCeeccEEEEEEecCCCCEEEEEEEE
Q 009664 258 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE---KTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYD 334 (529)
Q Consensus 258 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~l~i~v~d 334 (529)
....|.|+|+|++|++|+.+|..|.+||||++++.+... +.++|+++++++||.|||+|.|.+... ...|.|+|||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d 94 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFD 94 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEE
Confidence 367899999999999999999889999999999985332 578999999999999999999999764 4689999999
Q ss_pred CCCCCCCceeEEEEEECcccCCCcee------eEEEEcccccccccCCccccEEEEEEEEEE
Q 009664 335 DEGIQSSELIGCAQVRLCELEPGKVK------DVWLKLVKDLDVQRDTKYRGQVHLELLYCP 390 (529)
Q Consensus 335 ~~~~~~d~~lG~~~i~l~~l~~~~~~------~~~~~L~~~~~~~~~~~~~G~i~l~l~~~p 390 (529)
++.+++|++||++.++|.++..+... ..|++|.+.. ...+..|+|++++.|.|
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~---~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRS---HKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSS---TTCCCCSEEEEEEEECC
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCccccccccccccccccc---CCCCcceEEEEEEEEeC
Confidence 99999999999999999998655432 5899997542 23467899999999975
No 6
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.85 E-value=5.2e-21 Score=163.30 Aligned_cols=120 Identities=27% Similarity=0.525 Sum_probs=104.8
Q ss_pred ceEEEEEEEEecCCCc---cCCCCCCCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEEEecCCCCEEEEEEEECCC
Q 009664 261 VGTLEVKLVQAKGLTN---KDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEG 337 (529)
Q Consensus 261 ~g~L~V~v~~a~~L~~---~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~l~i~v~d~~~ 337 (529)
.|.|+|+|++|++|+. .+..|.+||||++++.+.+.+.++|+++++++||.|||+|.|.+.......|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 5899999999999998 4667899999999998554578999999999999999999999976667799999999998
Q ss_pred CCCCceeEEEEEECcccCCCceeeEEEEcccccccccCCccccEEEEEEEEE
Q 009664 338 IQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYC 389 (529)
Q Consensus 338 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~ 389 (529)
. +|++||++.++|.++..+...+.|++|.+ ...|+|+++++..
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~--------~~~g~i~~~le~~ 124 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGEKKEVPFIFNQ--------VTEMVLEMSLEVA 124 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTCEEEEEEEETT--------TEEEEEEEEEECC
T ss_pred C-CCceeEEEEEEHHHccCCCcEEEEEEcCC--------CceEEEEEEEEeC
Confidence 7 48999999999999999999999999952 4567777777644
No 7
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.85 E-value=5.4e-21 Score=164.84 Aligned_cols=124 Identities=28% Similarity=0.538 Sum_probs=109.1
Q ss_pred ccCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEEEecCCCCEEEEEEEECC
Q 009664 257 ELKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDE 336 (529)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~l~i~v~d~~ 336 (529)
+..+.|.|+|+|++|++|+.+|..|.+||||++++. ++.++|+++++++||.|||+|.|.+.+. .+.|.|+|||++
T Consensus 8 ~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~---~~~~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~d 83 (133)
T 2ep6_A 8 DVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELG---NDRLQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDED 83 (133)
T ss_dssp SCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEET---TEEEECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEEE
T ss_pred ccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEEC---CEEEEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEECC
Confidence 457899999999999999999999999999999997 5688999999999999999999999865 468999999999
Q ss_pred CCCCCceeEEEEEECcccCCCceeeEEEEcccccccccCCccccEEEEEEEEE
Q 009664 337 GIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYC 389 (529)
Q Consensus 337 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~ 389 (529)
..++|++||++.+++.++..+. ..|++|.... .+....|+|++++.|.
T Consensus 84 ~~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~---~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 84 GDKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKD---LEQAFKGVIYLEMDLI 131 (133)
T ss_dssp TTEEEEECCBCEEEGGGCCSSC--CEECCCBCSC---TTSCCSSEEEEEEEEE
T ss_pred CCCCCCeeEEEEEEHHHccCCC--ceEEEeecCC---CCCccceEEEEEEEEE
Confidence 9888999999999999997654 5899997532 1346789999999986
No 8
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.85 E-value=3.8e-21 Score=168.98 Aligned_cols=117 Identities=22% Similarity=0.336 Sum_probs=101.5
Q ss_pred CcceEEEEEEEEecCCCccCC----------CCCCCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEEEecCCCCEE
Q 009664 259 KPVGTLEVKLVQAKGLTNKDL----------IGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHL 328 (529)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~----------~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~l 328 (529)
...|.|+|+|++|++|+++|. .|.+||||+++++ +.+..+|+++++|+||+|||+|.|.+.+. +.|
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~--~~~~~kT~v~~ktlnP~WNE~F~f~v~~~--~~L 101 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVD--QVRVGQTSTKQKTNKPTYNEEFCANVTDG--GHL 101 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEET--TEEEEECCCCSSCSSCEEEEEEEEEEEEE--CEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEEC--CEeeEEeeecCCCCCCccCcEEEEEcCCC--CEE
Confidence 567999999999999998873 2679999999996 23457999999999999999999999763 589
Q ss_pred EEEEEECCCCCCCceeEEEEEECcccCCC----ceeeEEEEcccccccccCCccccEEEEEEEEE
Q 009664 329 VVRIYDDEGIQSSELIGCAQVRLCELEPG----KVKDVWLKLVKDLDVQRDTKYRGQVHLELLYC 389 (529)
Q Consensus 329 ~i~v~d~~~~~~d~~lG~~~i~l~~l~~~----~~~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~ 389 (529)
.|+|||+|.+++|++||++.+++.++..+ ...+.|++|. +.|+|+++++|.
T Consensus 102 ~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~----------~~G~i~l~l~~~ 156 (157)
T 2fk9_A 102 ELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE----------PEGKVFVVITLT 156 (157)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB----------SSCEEEEEEEEC
T ss_pred EEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC----------CCcEEEEEEEEE
Confidence 99999999999999999999999998644 6789999994 269999999873
No 9
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.85 E-value=3.5e-20 Score=162.90 Aligned_cols=122 Identities=31% Similarity=0.565 Sum_probs=106.6
Q ss_pred CcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEEEecCCCCEEEEEEEECCCC
Q 009664 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEGI 338 (529)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~l~i~v~d~~~~ 338 (529)
...|.|+|+|++|++|+.+|..|.+||||+++++ ++.++|+++++++||.|||+|.|.+.... +.|.|+|||++..
T Consensus 14 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~---~~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v~d~d~~ 89 (148)
T 3kwu_A 14 KWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVG---KTKKRTKTIYGNLNPVWEENFHFECHNSS-DRIKVRVLDEDDD 89 (148)
T ss_dssp -CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEET---TEEEECCCCCSCSSCEEEEEEEEEECSTT-CEEEEEEEECCCS
T ss_pred ccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEEC---CEEEECCccCCCCCCCcccEEEEEecCCC-CEEEEEEEECCCC
Confidence 3569999999999999999999999999999996 67899999999999999999999997764 6899999999985
Q ss_pred -----------CCCceeEEEEEECcccCCCceeeEEEEcccccccccCCccccEEEEEEEEE
Q 009664 339 -----------QSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYC 389 (529)
Q Consensus 339 -----------~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~ 389 (529)
++|++||++.++|.++ ....+.|++|.+.. .....+|+|++++.|.
T Consensus 90 ~~~~~~~~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~---~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 90 IKSRVKQRFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRT---DKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHHHTTTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSS---TTCCCCCEEEEEEEEE
T ss_pred ccccccccccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCC---CCCCCceEEEEEEEEE
Confidence 7899999999999998 34568999997532 2345779999999985
No 10
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.84 E-value=3.7e-20 Score=167.62 Aligned_cols=129 Identities=25% Similarity=0.482 Sum_probs=102.4
Q ss_pred CcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCC---CeEeccccCCCCCCeeccEEEEEEecCCCCEEEEEEEEC
Q 009664 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE---KTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDD 335 (529)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~l~i~v~d~ 335 (529)
...|.|+|+|++|++|+.++..|++||||++++.+... +.++|+++++++||.|||+|.|.+... .+.|.|+|||+
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~V~d~ 83 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFEVFDE 83 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEEEEEC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEEEEEC
Confidence 56899999999999999999999999999999985333 568999999999999999999999754 46899999999
Q ss_pred CCCCCCceeEEEEEECcccCCCcee-e-----EEEEcccccccccCCccccEEEEEEEEEEc
Q 009664 336 EGIQSSELIGCAQVRLCELEPGKVK-D-----VWLKLVKDLDVQRDTKYRGQVHLELLYCPF 391 (529)
Q Consensus 336 ~~~~~d~~lG~~~i~l~~l~~~~~~-~-----~~~~L~~~~~~~~~~~~~G~i~l~l~~~p~ 391 (529)
+.+++|++||++.++|.++..+... + .|++|.... ...+..|+|++++.|.|.
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~---~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRS---HKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC------CCCCEEEECBCSS---TTCCCCSEEEEEEEECC-
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccC---CCCccCEEEEEEEEEEeC
Confidence 9999999999999999999765433 2 799997542 235578999999999986
No 11
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.83 E-value=2.6e-20 Score=161.17 Aligned_cols=118 Identities=19% Similarity=0.328 Sum_probs=101.6
Q ss_pred cceEEEEEEEEecCCCccCCCCC-----------CCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEEEecCCCCEE
Q 009664 260 PVGTLEVKLVQAKGLTNKDLIGK-----------SDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHL 328 (529)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~-----------~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~l 328 (529)
..|.|+|+|++|++|+++|..++ +||||++++. +.+..+|+++.+|+||.|||+|.|.+.+. +.|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~--~~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L 79 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVD--DSRIGQTATKQKTNSPAWHDEFVTDVCNG--RKI 79 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEET--TEEEEECCCCSSCSSCEEEEEEEEEEEEE--CEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEEC--CeEeeeeeEECCCcCCccCCEEEEEecCC--CEE
Confidence 46999999999999998885544 9999999985 23457899999999999999999999775 689
Q ss_pred EEEEEECCCCCCCceeEEEEEECcccCCC--ceeeEEEEcccccccccCCccccEEEEEEEEEEc
Q 009664 329 VVRIYDDEGIQSSELIGCAQVRLCELEPG--KVKDVWLKLVKDLDVQRDTKYRGQVHLELLYCPF 391 (529)
Q Consensus 329 ~i~v~d~~~~~~d~~lG~~~i~l~~l~~~--~~~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~p~ 391 (529)
.|+|||+|.+++|++||++.+++.++..+ ...+.|++|. +.|+|+++++|.+.
T Consensus 80 ~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~----------~~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 80 ELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE----------PEGKVYVIIDLSGS 134 (136)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB----------SSCEEEEEEEEEEE
T ss_pred EEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcC----------CCeEEEEEEEEEec
Confidence 99999999999999999999999998764 3458999873 36999999999863
No 12
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.81 E-value=1.8e-19 Score=155.05 Aligned_cols=125 Identities=22% Similarity=0.422 Sum_probs=103.2
Q ss_pred cceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEEEecCCCCEEEEEEEECCCCC
Q 009664 260 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEGIQ 339 (529)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~l~i~v~d~~~~~ 339 (529)
....|+|+|++|++|+.+|..|.+||||++++.+. .+.++|+++++++||.|||+|.|.+.+.. .|.|+|||++.++
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~-~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~l~~~v~d~d~~~ 79 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS-GQCHSTDTVKNTLDPKWNQHYDLYVGKTD--SITISVWNHKKIH 79 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTT-CCEEECCCCSSCSSCEEEEEEEEEEETTC--CEEEEEEEGGGTT
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCC-CceEECCccCCCCCCCccCEEEEEeCCCC--EEEEEEEECCCCC
Confidence 35689999999999999999999999999999633 47899999999999999999999997753 5999999999886
Q ss_pred C---CceeEEEEEECccc-CCCceeeEEEEcccccccccCCccccEEEEEEEE
Q 009664 340 S---SELIGCAQVRLCEL-EPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLY 388 (529)
Q Consensus 340 ~---d~~lG~~~i~l~~l-~~~~~~~~~~~L~~~~~~~~~~~~~G~i~l~l~~ 388 (529)
+ |++||++.+++.++ ........|++|.... .....+.+|+|++++.+
T Consensus 80 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~-~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 80 KKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLN-PSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp SSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSS-TTCCCCCCSEEEEEEEE
T ss_pred CCCCCCceEEEEEeHHHhhcccccCcEEEeeeecC-CCCCCceeEEEEEEEEc
Confidence 6 89999999999988 3334445789987532 12234568999999875
No 13
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.81 E-value=1.3e-19 Score=158.17 Aligned_cols=112 Identities=30% Similarity=0.475 Sum_probs=101.1
Q ss_pred ccCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEEEecC--CCCEEEEEEEE
Q 009664 257 ELKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYD 334 (529)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~l~i~v~d 334 (529)
+....+.|+|+|++|++|+.++..+.+||||++++.+.+.+.++|++++++.||.|||+|.|.+... ....|.|+|||
T Consensus 29 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 108 (143)
T 3f04_A 29 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 108 (143)
T ss_dssp EETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEe
Confidence 3467899999999999999999889999999999986666789999999999999999999998643 45789999999
Q ss_pred CCCCCCCceeEEEEEECcccCCCceeeEEEEccc
Q 009664 335 DEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (529)
Q Consensus 335 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 368 (529)
++.+++|++||++.++|.++..+...+.|++|++
T Consensus 109 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 109 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCCCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 9999999999999999999999888999999964
No 14
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=1.5e-19 Score=157.47 Aligned_cols=112 Identities=26% Similarity=0.444 Sum_probs=99.8
Q ss_pred cCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEEEec---CCCCEEEEEEEE
Q 009664 258 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVED---ESTQHLVVRIYD 334 (529)
Q Consensus 258 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~---~~~~~l~i~v~d 334 (529)
....+.|+|+|++|++|+.++..|.+||||++++.+.+.+.++|+++++++||+|||+|.|.+.. .....|.|+|||
T Consensus 22 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 101 (141)
T 2d8k_A 22 NFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLD 101 (141)
T ss_dssp CSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEE
T ss_pred eCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEE
Confidence 35679999999999999999989999999999998666678999999999999999999998522 235689999999
Q ss_pred CCCCCCCceeEEEEEECcccCCCceeeEEEEcccc
Q 009664 335 DEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKD 369 (529)
Q Consensus 335 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 369 (529)
++.+++|++||++.+++.++..+...+.|++|.+.
T Consensus 102 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 102 YDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp CCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred CCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 99999999999999999999888888999999753
No 15
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.81 E-value=2.1e-19 Score=158.51 Aligned_cols=112 Identities=30% Similarity=0.475 Sum_probs=100.8
Q ss_pred ccCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEEEecC--CCCEEEEEEEE
Q 009664 257 ELKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYD 334 (529)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~l~i~v~d 334 (529)
+....+.|+|+|++|++|+.+|..|.+||||++++.+.+.+.++|+++++++||+|||+|.|.+... ....|.|+|||
T Consensus 37 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 116 (152)
T 1rsy_A 37 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 116 (152)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEE
Confidence 3467899999999999999999899999999999986666789999999999999999999988543 35789999999
Q ss_pred CCCCCCCceeEEEEEECcccCCCceeeEEEEccc
Q 009664 335 DEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (529)
Q Consensus 335 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 368 (529)
++.+++|++||++.++|.++..+...+.|++|.+
T Consensus 117 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 117 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 9999899999999999999988888899999963
No 16
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.80 E-value=5.2e-20 Score=162.44 Aligned_cols=111 Identities=17% Similarity=0.212 Sum_probs=97.0
Q ss_pred ccCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCC---CeEeccccCCCCCCeeccEEEEEEecC--CCCEEEEE
Q 009664 257 ELKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE---KTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVR 331 (529)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~l~i~ 331 (529)
+....+.|+|+|++|++|+++|..|.+||||++++.+... .++||+++++|+||+|||+|.|.+... ....|.|+
T Consensus 38 y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~ 117 (155)
T 2z0u_A 38 YDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVD 117 (155)
T ss_dssp EETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEE
T ss_pred EcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEE
Confidence 3457799999999999999999999999999999985322 378999999999999999999998642 24589999
Q ss_pred EEECCCCCCCceeEEEEEECcccC-CCceeeEEEEcc
Q 009664 332 IYDDEGIQSSELIGCAQVRLCELE-PGKVKDVWLKLV 367 (529)
Q Consensus 332 v~d~~~~~~d~~lG~~~i~l~~l~-~~~~~~~~~~L~ 367 (529)
|||+|.++++++||++.++|.++. .+.....|++|.
T Consensus 118 V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 118 VCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 999999999999999999999995 467788999985
No 17
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.80 E-value=4.2e-19 Score=152.99 Aligned_cols=109 Identities=20% Similarity=0.352 Sum_probs=96.2
Q ss_pred CcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecC--CCCeEeccccCCCCCCeeccEEEEE-EecC--CCCEEEEEEE
Q 009664 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPL--PEKTKKSKTINNDLNPIWNEHFEFI-VEDE--STQHLVVRIY 333 (529)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~kT~~~~~t~nP~Wne~f~~~-v~~~--~~~~l~i~v~ 333 (529)
...|.|+|+|++|++|+. +..|.+||||++++.+. ...+++|+++++++||+|||+|.|. +... ....|.|+||
T Consensus 17 ~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~ 95 (134)
T 2b3r_A 17 YRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVL 95 (134)
T ss_dssp EETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEE
T ss_pred ecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEE
Confidence 457899999999999997 77889999999999754 2457899999999999999999999 7532 4569999999
Q ss_pred ECCCCCCCceeEEEEEECcccCCCceeeEEEEccc
Q 009664 334 DDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (529)
Q Consensus 334 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 368 (529)
|++.++++++||++.++|.++..+...+.|++|.+
T Consensus 96 d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 96 SAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp ECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred ECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 99999999999999999999988888899999964
No 18
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.79 E-value=8.6e-19 Score=157.50 Aligned_cols=126 Identities=25% Similarity=0.318 Sum_probs=104.2
Q ss_pred CcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEEEecCCCCEEEEEEEECCCC
Q 009664 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEGI 338 (529)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~l~i~v~d~~~~ 338 (529)
...+.|+|+|++|++|+..+..+.+||||+++++ ++.++|+++++++||+|||+|.|.+.. .+.|.|+|||++.+
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~---~~~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~ 107 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVD---GQSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTL 107 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEET---TEEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSS
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEEC---CEEeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCC
Confidence 4678999999999999944444559999999997 478999999999999999999999853 67999999999999
Q ss_pred CCCceeEEEEEECcccCCC---ce--eeEEEEcccccccccCCccccEEEEEEEEEEcc
Q 009664 339 QSSELIGCAQVRLCELEPG---KV--KDVWLKLVKDLDVQRDTKYRGQVHLELLYCPFG 392 (529)
Q Consensus 339 ~~d~~lG~~~i~l~~l~~~---~~--~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~p~~ 392 (529)
++|++||++.++|.++..+ .. ...|++|.... ...+..|+|.+.+.|.+..
T Consensus 108 ~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~---~~~~~~G~L~v~l~~l~~~ 163 (173)
T 2nq3_A 108 KSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDK---EPTETIGDLSICLDGLQLE 163 (173)
T ss_dssp SCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESS---CTTSEEEEEEEEEESEECC
T ss_pred CCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCC---CCCcccEEEEEEEeeeecc
Confidence 9999999999999998532 22 26799997641 2346789999999999764
No 19
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77 E-value=1e-18 Score=149.64 Aligned_cols=110 Identities=23% Similarity=0.394 Sum_probs=90.5
Q ss_pred ccCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCC--CCeEeccccCCCCCCeeccEEEEEEe---cCCCCEEEEE
Q 009664 257 ELKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFIVE---DESTQHLVVR 331 (529)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~~~~~t~nP~Wne~f~~~v~---~~~~~~l~i~ 331 (529)
+....|.|+|+|++|++|+.++..|.+||||++++.+.+ ...++|+++++++||.|||+|.|.+. +.....|.|+
T Consensus 13 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~ 92 (129)
T 2bwq_A 13 FDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 92 (129)
T ss_dssp EETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEE
T ss_pred EccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEE
Confidence 345679999999999999999999999999999997543 46799999999999999999999852 2235689999
Q ss_pred EEECCCCCC--CceeEEEEEECcccCCCceeeEEEEcc
Q 009664 332 IYDDEGIQS--SELIGCAQVRLCELEPGKVKDVWLKLV 367 (529)
Q Consensus 332 v~d~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~L~ 367 (529)
|||++..++ +++||++.++|.++.... .+.|++|+
T Consensus 93 V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 93 LWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp EEEC-------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred EEECCcCcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 999999886 999999999999986654 78999983
No 20
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.77 E-value=3e-18 Score=148.55 Aligned_cols=112 Identities=21% Similarity=0.306 Sum_probs=96.2
Q ss_pred ccCcceEEEEEEEEecCCCccCCC-CCCCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEE-EecC--CCCEEEEEE
Q 009664 257 ELKPVGTLEVKLVQAKGLTNKDLI-GKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFI-VEDE--STQHLVVRI 332 (529)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~-g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~-v~~~--~~~~l~i~v 332 (529)
+....+.|+|+|++|++|+.+|.. |.+||||++++.+.+.+.++|+++++++||+|||+|.|. +... ....|.|+|
T Consensus 17 y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V 96 (138)
T 1ugk_A 17 YNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTI 96 (138)
T ss_dssp EEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEE
Confidence 345789999999999999999985 899999999998655678999999999999999999996 5432 346899999
Q ss_pred EECCCCCCCceeEEEEEECcccCCCcee-eEEEEccc
Q 009664 333 YDDEGIQSSELIGCAQVRLCELEPGKVK-DVWLKLVK 368 (529)
Q Consensus 333 ~d~~~~~~d~~lG~~~i~l~~l~~~~~~-~~~~~L~~ 368 (529)
||++.+++|++||++.++|.++..+... ..|++|.+
T Consensus 97 ~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 97 LSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp EEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred EECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 9999999999999999999999776544 56788864
No 21
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.77 E-value=6.9e-19 Score=154.53 Aligned_cols=113 Identities=17% Similarity=0.325 Sum_probs=98.8
Q ss_pred ccCcceEEEEEEEEecCCCccC-CCCCCCcEEEEEEecCCC--CeEeccccCCCCCCeeccEEEEEEecC--CCCEEEEE
Q 009664 257 ELKPVGTLEVKLVQAKGLTNKD-LIGKSDPYAVLFVRPLPE--KTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVR 331 (529)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d-~~g~~dpyv~v~~~~~~~--~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~l~i~ 331 (529)
+....|.|+|+|++|++|+.++ ..|.+||||++++.+... .+++|+++++++||.|||+|.|.+... ....|.|+
T Consensus 18 y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~ 97 (148)
T 3fdw_A 18 YEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFS 97 (148)
T ss_dssp EETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEE
Confidence 3467899999999999999888 578999999999986543 378999999999999999999998654 24579999
Q ss_pred EEECCCCCCCceeEEEEEECcccCCCceeeEEEEcccc
Q 009664 332 IYDDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKD 369 (529)
Q Consensus 332 v~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 369 (529)
|||++.+++|++||++.++|.++..+...+.|++|.+.
T Consensus 98 V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 98 VWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp EEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC
T ss_pred EEECCCCcCCcEEEEEEEEcccccccCCccceEECcCc
Confidence 99999999999999999999999777778899999764
No 22
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.77 E-value=2.2e-18 Score=149.28 Aligned_cols=109 Identities=16% Similarity=0.126 Sum_probs=94.2
Q ss_pred ccCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecC-CCCeEeccccCCCCCCeeccEEEEEEecC--CCCEEEEEEE
Q 009664 257 ELKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPL-PEKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIY 333 (529)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~-~~~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~l~i~v~ 333 (529)
+....+.|+|+|++|+ ++|..|.+||||++++.+. +...++|+++++++||+|||+|.|.+... ....|.|+||
T Consensus 21 y~~~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~ 97 (138)
T 1wfm_A 21 YDCQKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLR 97 (138)
T ss_dssp EETTTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEE
T ss_pred EeCCCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEE
Confidence 3456799999999999 3677899999999999753 23468999999999999999999998643 3468999999
Q ss_pred ECCCCCCCceeEEEEEECcccCCCceeeEEEEccc
Q 009664 334 DDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (529)
Q Consensus 334 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 368 (529)
|+|.+++|++||++.++|.++..+...+.|++|.+
T Consensus 98 d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 98 TCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp ECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred ECCCCCCCcEEEEEEEEcccccCcccccceeeCcC
Confidence 99999999999999999999977777889999975
No 23
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.76 E-value=1.2e-18 Score=151.68 Aligned_cols=111 Identities=23% Similarity=0.410 Sum_probs=95.4
Q ss_pred cCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCC--CCeEeccccCCCCCCeeccEEEEEE-e--cCCCCEEEEEE
Q 009664 258 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFIV-E--DESTQHLVVRI 332 (529)
Q Consensus 258 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~~~~~t~nP~Wne~f~~~v-~--~~~~~~l~i~v 332 (529)
....+.|+|+|++|++|+.++..|.+||||++++.+.. .+.++|+++++++||+|||+|.|.+ . +.....|.|+|
T Consensus 17 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V 96 (141)
T 1v27_A 17 DKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITL 96 (141)
T ss_dssp ETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEE
T ss_pred eCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEE
Confidence 35679999999999999999999999999999996432 4678999999999999999999984 3 22356999999
Q ss_pred EECCCCCC--CceeEEEEEECcccCCCceeeEEEEcccc
Q 009664 333 YDDEGIQS--SELIGCAQVRLCELEPGKVKDVWLKLVKD 369 (529)
Q Consensus 333 ~d~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 369 (529)
||++.+++ +++||++.++|.++.... .+.|++|.+.
T Consensus 97 ~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~ 134 (141)
T 1v27_A 97 WDQARVREEESEFLGEILIELETALLDD-EPHWYKLQTH 134 (141)
T ss_dssp EEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCC
T ss_pred EECCCCcCCCCceEEEEEEEccccCCCC-CCceEECccc
Confidence 99999886 999999999999986654 7899999753
No 24
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=1.1e-18 Score=152.08 Aligned_cols=111 Identities=26% Similarity=0.395 Sum_probs=95.9
Q ss_pred cCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCC--CeEeccccCCCCCCeeccEEEEEEecC--CCCEEEEEEE
Q 009664 258 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE--KTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIY 333 (529)
Q Consensus 258 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~l~i~v~ 333 (529)
....+.|+|+|++|++|+.++..| +||||++++.+.+. ..++|+++++++||+|||+|.|.+... ....|.|+||
T Consensus 20 ~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~ 98 (142)
T 2dmg_A 20 SSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVK 98 (142)
T ss_dssp ETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEE
T ss_pred eCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEE
Confidence 456799999999999999999889 99999999986444 678999999999999999999998532 2358999999
Q ss_pred ECCCCCC--CceeEEEEEECcccCCCceeeEEEEcccc
Q 009664 334 DDEGIQS--SELIGCAQVRLCELEPGKVKDVWLKLVKD 369 (529)
Q Consensus 334 d~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 369 (529)
|++.++. +++||++.++|.++..+...+.|++|.+.
T Consensus 99 d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~ 136 (142)
T 2dmg_A 99 NSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTED 136 (142)
T ss_dssp ECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCS
T ss_pred ECCCccccCCcEEEEEEEecccccccccccceeeccCC
Confidence 9998763 57999999999999877788899999753
No 25
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=1e-18 Score=153.28 Aligned_cols=112 Identities=21% Similarity=0.367 Sum_probs=96.6
Q ss_pred ccCcceEEEEEEEEecCCCcc-CC------CCCCCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEEEecC--CCCE
Q 009664 257 ELKPVGTLEVKLVQAKGLTNK-DL------IGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE--STQH 327 (529)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~-d~------~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~ 327 (529)
+....|.|+|+|++|++|+.+ +. .|.+||||++++.+...+.++|+++++++||+|||+|.|.+... ....
T Consensus 21 y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 100 (147)
T 2enp_A 21 YDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRT 100 (147)
T ss_dssp EETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSE
T ss_pred EcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCE
Confidence 346789999999999999984 43 35899999999987656789999999999999999999997542 2358
Q ss_pred EEEEEEECCCCCCCceeEEEEEECcccCCCceeeEEEEccc
Q 009664 328 LVVRIYDDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (529)
Q Consensus 328 l~i~v~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 368 (529)
|.|+|||++.++++++||++.++|.++..+.....|+.|.+
T Consensus 101 L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 101 LLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp EEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred EEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeec
Confidence 99999999999999999999999999987777788999965
No 26
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.76 E-value=2.6e-18 Score=149.71 Aligned_cols=111 Identities=27% Similarity=0.502 Sum_probs=97.5
Q ss_pred cCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCC--CCeEeccccCCCCCCeeccEEEEE-EecC--CCCEEEEEE
Q 009664 258 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFI-VEDE--STQHLVVRI 332 (529)
Q Consensus 258 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~~~~~t~nP~Wne~f~~~-v~~~--~~~~l~i~v 332 (529)
....|.|+|+|++|++|+.++..|.+||||++++.+.. ...++|+++++++||.|||+|.|. +... ....|.|+|
T Consensus 25 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V 104 (142)
T 2chd_A 25 DQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISV 104 (142)
T ss_dssp EGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEE
T ss_pred eCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEE
Confidence 35789999999999999999989999999999998533 267899999999999999999998 5432 235899999
Q ss_pred EECCCCCCCceeEEEEEECcccCCCceeeEEEEccc
Q 009664 333 YDDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (529)
Q Consensus 333 ~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 368 (529)
||++.+++|++||++.++|.++..+.....|++|.+
T Consensus 105 ~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 105 CDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred EECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 999999999999999999999998888899999864
No 27
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.76 E-value=4.9e-18 Score=149.23 Aligned_cols=108 Identities=35% Similarity=0.553 Sum_probs=95.1
Q ss_pred cceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCC--CCeEeccccCCCCCCeeccEEEEEEecC-CCCEEEEEEEECC
Q 009664 260 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFIVEDE-STQHLVVRIYDDE 336 (529)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~~~~~t~nP~Wne~f~~~v~~~-~~~~l~i~v~d~~ 336 (529)
..|.|+|+|++|++|+.++..+.+||||++++.+.. ...++|+++++++||.|||+|.|.+... ....|.|+|||++
T Consensus 29 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d 108 (149)
T 1a25_A 29 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 108 (149)
T ss_dssp SSSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECC
Confidence 358899999999999999989999999999998533 3578999999999999999999998653 2358999999999
Q ss_pred CCCCCceeEEEEEECcccCCCceeeEEEEccc
Q 009664 337 GIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (529)
Q Consensus 337 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 368 (529)
.+++|++||++.++|.++..+. .+.|++|.+
T Consensus 109 ~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~ 139 (149)
T 1a25_A 109 LTSRNDFMGSLSFGISELQKAG-VDGWFKLLS 139 (149)
T ss_dssp SSSCCEEEEEEEEEHHHHTTCC-EEEEEECBC
T ss_pred CCCCCCEEEEEEEEHHHhCcCc-cCCeEEccC
Confidence 9989999999999999997764 789999964
No 28
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.76 E-value=3.3e-18 Score=148.10 Aligned_cols=109 Identities=33% Similarity=0.505 Sum_probs=95.8
Q ss_pred cceEEEEEEEEecCCCccCCCCCCCcEEEEEEecC--CCCeEeccccCCCCCCeeccEEEEEEecC-CCCEEEEEEEECC
Q 009664 260 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPL--PEKTKKSKTINNDLNPIWNEHFEFIVEDE-STQHLVVRIYDDE 336 (529)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~~~kT~~~~~t~nP~Wne~f~~~v~~~-~~~~l~i~v~d~~ 336 (529)
..|.|+|+|++|++|+.++..|.+||||++++.+. ....++|++++++.||.|||+|.|.+... ..+.|.|+|||++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 46999999999999999999999999999999743 34679999999999999999999998653 2358999999999
Q ss_pred CCCCCceeEEEEEECcccCCCceeeEEEEcccc
Q 009664 337 GIQSSELIGCAQVRLCELEPGKVKDVWLKLVKD 369 (529)
Q Consensus 337 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 369 (529)
..++|++||++.++|.++..+. .+.|++|.+.
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred CCCCCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 9999999999999999997655 7899999753
No 29
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.75 E-value=7.2e-19 Score=153.29 Aligned_cols=108 Identities=23% Similarity=0.453 Sum_probs=94.6
Q ss_pred ceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCC-----------CeEeccccCCCCCCeeccEEEEE-Eec--CCCC
Q 009664 261 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE-----------KTKKSKTINNDLNPIWNEHFEFI-VED--ESTQ 326 (529)
Q Consensus 261 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~-----------~~~kT~~~~~t~nP~Wne~f~~~-v~~--~~~~ 326 (529)
.|.|+|+|++|++|+.+|..|.+||||++++.+..+ ..++|+++++|+||.|||+|.|. +.. ....
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 689999999999999999999999999999985432 25789999999999999999997 532 2456
Q ss_pred EEEEEEEECCCCCCCceeEEEEEECcccCCCceeeEEEEccc
Q 009664 327 HLVVRIYDDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (529)
Q Consensus 327 ~l~i~v~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 368 (529)
.|.|+|||++.+++|++||++.++|.++..+...+.|++|.+
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCc
Confidence 999999999999999999999999999877677789999964
No 30
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.75 E-value=3.8e-18 Score=153.44 Aligned_cols=109 Identities=25% Similarity=0.400 Sum_probs=95.8
Q ss_pred cceEEEEEEEEecCCCccCC-CCCCCcEEEEEEecCCC--CeEeccccCCCCCCeeccEEEEEEecCCCCEEEEEEE-EC
Q 009664 260 PVGTLEVKLVQAKGLTNKDL-IGKSDPYAVLFVRPLPE--KTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIY-DD 335 (529)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~-~g~~dpyv~v~~~~~~~--~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~l~i~v~-d~ 335 (529)
..|.|.|+|++|++|+.+|. .|.+||||++++.+... ..++|+++++++||+|||+|.|.+.. ....|.|+|| |+
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIVWGDY 106 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEEEEcC
Confidence 57899999999999999985 69999999999985432 37899999999999999999999854 4578999999 99
Q ss_pred CCCCCCceeEEEEEECcccCCCceeeEEEEcccc
Q 009664 336 EGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKD 369 (529)
Q Consensus 336 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 369 (529)
+.+++|++||++.++|.++..+...+.|++|.+.
T Consensus 107 d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 107 GRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp STTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 9999999999999999999888888999999754
No 31
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.74 E-value=7.8e-18 Score=148.62 Aligned_cols=111 Identities=27% Similarity=0.477 Sum_probs=95.5
Q ss_pred ccCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCC--CCeEeccccCCCCCCeeccEEEEEEe--cCCCCEEEEEE
Q 009664 257 ELKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFIVE--DESTQHLVVRI 332 (529)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~~~~~t~nP~Wne~f~~~v~--~~~~~~l~i~v 332 (529)
+....|.|+|+|++|++|+..+ .|.+||||++++.+.. ..+++|+++++++||.|||+|.|.+. +.. ..|.|+|
T Consensus 22 y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~-~~L~i~V 99 (153)
T 3fbk_A 22 IDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQ-KRLLVTV 99 (153)
T ss_dssp EEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTT-SEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhC-CEEEEEE
Confidence 4467899999999999999998 6999999999997532 35789999999999999999999984 333 4699999
Q ss_pred EECCCCCC-CceeEEEEEECcccCC-CceeeEEEEcccc
Q 009664 333 YDDEGIQS-SELIGCAQVRLCELEP-GKVKDVWLKLVKD 369 (529)
Q Consensus 333 ~d~~~~~~-d~~lG~~~i~l~~l~~-~~~~~~~~~L~~~ 369 (529)
||++.+++ |++||++.++|.++.. +.....|++|.+.
T Consensus 100 ~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~ 138 (153)
T 3fbk_A 100 WNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGE 138 (153)
T ss_dssp EECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCT
T ss_pred EeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCCh
Confidence 99998876 9999999999999974 7778899999753
No 32
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.74 E-value=1.6e-17 Score=147.66 Aligned_cols=113 Identities=31% Similarity=0.448 Sum_probs=95.8
Q ss_pred ccCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCC--CeEeccccCCCCCCeeccEEEEEEecC--CCCEEEEEE
Q 009664 257 ELKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE--KTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRI 332 (529)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~l~i~v 332 (529)
+....|.|+|+|++|++|+.+|..|.+||||++++.+.+. ..++|+++++++||.|||+|.|.+... ....|.|+|
T Consensus 20 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V 99 (159)
T 1tjx_A 20 YVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 99 (159)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEE
Confidence 3457899999999999999999999999999999985432 468999999999999999999998643 245899999
Q ss_pred EECCCCCCCceeEEEEEECccc------------CCCceeeEEEEcccc
Q 009664 333 YDDEGIQSSELIGCAQVRLCEL------------EPGKVKDVWLKLVKD 369 (529)
Q Consensus 333 ~d~~~~~~d~~lG~~~i~l~~l------------~~~~~~~~~~~L~~~ 369 (529)
||++.+++|++||++.+++..+ .++.....|++|.+.
T Consensus 100 ~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 100 LDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 148 (159)
T ss_dssp EECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCH
T ss_pred EECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCc
Confidence 9999999999999999999853 345567889998653
No 33
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.73 E-value=1.6e-17 Score=143.92 Aligned_cols=98 Identities=24% Similarity=0.444 Sum_probs=85.9
Q ss_pred ccCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCC--CeEeccccCCCCCCeeccEEEEEEecCC--CCEEEEEE
Q 009664 257 ELKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE--KTKKSKTINNDLNPIWNEHFEFIVEDES--TQHLVVRI 332 (529)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~~~~~t~nP~Wne~f~~~v~~~~--~~~l~i~v 332 (529)
+....|.|+|+|++|++|+..|..|.+||||++++.+.+. .+++|++++++.||.|||+|.|.+.... ...|.|+|
T Consensus 11 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V 90 (138)
T 3n5a_A 11 YNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITV 90 (138)
T ss_dssp EETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEE
T ss_pred EcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEE
Confidence 3457799999999999999999999999999999985432 4689999999999999999999986542 35899999
Q ss_pred EECCCCCCCceeEEEEEECccc
Q 009664 333 YDDEGIQSSELIGCAQVRLCEL 354 (529)
Q Consensus 333 ~d~~~~~~d~~lG~~~i~l~~l 354 (529)
||++.+++|++||++.+++.++
T Consensus 91 ~d~~~~~~~~~lG~~~i~l~~~ 112 (138)
T 3n5a_A 91 MDKDKLSRNDVIGKIYLSWKSG 112 (138)
T ss_dssp EECCSSSCCEEEEEEEESSSSC
T ss_pred EECCCCCCCcEEEEEEEccccC
Confidence 9999999999999999999864
No 34
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.72 E-value=4.8e-17 Score=145.63 Aligned_cols=98 Identities=24% Similarity=0.399 Sum_probs=86.5
Q ss_pred ccCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCC--CCeEeccccCCCCCCeeccEEEEEEecC--CCCEEEEEE
Q 009664 257 ELKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRI 332 (529)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~l~i~v 332 (529)
+....|.|+|+|++|++|+.+|..|.+||||++++.+.. ...++|+++++++||+|||+|.|.+... ....|.|+|
T Consensus 32 y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 111 (166)
T 2cm5_A 32 YSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISV 111 (166)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEE
Confidence 345789999999999999999999999999999998533 3678999999999999999999998643 356899999
Q ss_pred EECCCCCCCceeEEEEEECccc
Q 009664 333 YDDEGIQSSELIGCAQVRLCEL 354 (529)
Q Consensus 333 ~d~~~~~~d~~lG~~~i~l~~l 354 (529)
||++.+++|++||++.+++.++
T Consensus 112 ~d~d~~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 112 WDYDIGKSNDYIGGCQLGISAK 133 (166)
T ss_dssp EECCSSSCCEEEEEEEEETTCC
T ss_pred EECCCCCCCcEEEeEEEecccC
Confidence 9999999999999999999875
No 35
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.71 E-value=3.7e-17 Score=144.32 Aligned_cols=109 Identities=24% Similarity=0.331 Sum_probs=85.3
Q ss_pred ccCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCC--eEeccccCCCCCCeeccEEEEEEecC--CCCEEEEEE
Q 009664 257 ELKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEK--TKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRI 332 (529)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~--~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~l~i~v 332 (529)
+....|.|.|+|++|++|+.++..|.+||||++++.+.+.. +++|+++++++||+|||+|.|.+... ....|.|+|
T Consensus 25 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V 104 (153)
T 1w15_A 25 YQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLV 104 (153)
T ss_dssp EETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEE
T ss_pred EcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEE
Confidence 34577999999999999999998899999999999754332 67999999999999999999998654 236899999
Q ss_pred EECCCCCCCceeEEEEEECcccCCCceeeEEEEcc
Q 009664 333 YDDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLV 367 (529)
Q Consensus 333 ~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 367 (529)
||++.+++|++||++.+++.+ .+...+.|+.|.
T Consensus 105 ~d~d~~~~~~~lG~~~i~l~~--~~~~~~~W~~l~ 137 (153)
T 1w15_A 105 LDSERGSRNEVIGRLVLGATA--EGSGGGHWKEIC 137 (153)
T ss_dssp EECCTTSCCEEEEEEEESTTC--CSHHHHHHHHHH
T ss_pred EeCCCCCCCcEEEEEEECCCC--CchHHHHHHHHH
Confidence 999999999999999999987 233344555553
No 36
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.69 E-value=2.2e-16 Score=135.02 Aligned_cols=118 Identities=21% Similarity=0.306 Sum_probs=83.4
Q ss_pred cceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCCeEecccc-CCCCCCeeccEEEEEEecCCCCEEEEEEEECCCC
Q 009664 260 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTI-NNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEGI 338 (529)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~-~~t~nP~Wne~f~~~v~~~~~~~l~i~v~d~~~~ 338 (529)
+.|.|+|+|++|+++.. .|.+||||+++ . . ..+|+++ .++.||.|||+|.|.+.+. ...|.|+|||+| +
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~-~---~-~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~ 72 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK-V---Q-NVKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-L 72 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE-E---T-TEEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-S
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE-e---c-CEEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-C
Confidence 56899999999998853 57899999999 3 2 2345444 4799999999999999865 357999999999 8
Q ss_pred CCCceeEEEEEECcccCCCc--eeeEEEEcccccccccCCcccc-------EEEEEEEE
Q 009664 339 QSSELIGCAQVRLCELEPGK--VKDVWLKLVKDLDVQRDTKYRG-------QVHLELLY 388 (529)
Q Consensus 339 ~~d~~lG~~~i~l~~l~~~~--~~~~~~~L~~~~~~~~~~~~~G-------~i~l~l~~ 388 (529)
++|++||++.++|.++.... ....|.++.-... ..+++..| .+.+++.|
T Consensus 73 ~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~-~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 73 IWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAI-MADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp SCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC-----------CCSCCCCCEEEEEEEE
T ss_pred CCCCeEEEEEEEHHHhhhcCCCCccccEEcccccc-cCCCcCcceECCCccEEEEEEEe
Confidence 89999999999999985332 2224655543221 12333344 37777665
No 37
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.68 E-value=3.1e-16 Score=131.88 Aligned_cols=119 Identities=20% Similarity=0.281 Sum_probs=101.4
Q ss_pred eEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCCeEeccccC-CCCCCeeccEEEEEEecC--CCCEEEEEEEECCCC
Q 009664 262 GTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTIN-NDLNPIWNEHFEFIVEDE--STQHLVVRIYDDEGI 338 (529)
Q Consensus 262 g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~-~t~nP~Wne~f~~~v~~~--~~~~l~i~v~d~~~~ 338 (529)
=.|+|+|.+|.+|+ |++|||+++.+. +.+++|++++ ++.||+|||.|+|.+..+ .+..|.+.|||++++
T Consensus 21 msL~V~l~~a~~Lp-----g~~Dp~akv~FR---g~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v 92 (144)
T 3l9b_A 21 MALIVHLKTVSELR-----GRADRIAKVTFR---GQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKV 92 (144)
T ss_dssp EEEEEEEEEEESCC-----SCEEEEEEEEET---TEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTT
T ss_pred EEEEEEEEEecCCC-----CCCCCeEEEEEe---ccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccc
Confidence 37999999999998 689999999995 7899999998 699999999999998754 356899999999999
Q ss_pred CCCceeEEEEEECcccCCCceeeEEEEcccccccccCCccccEEEEEEEEEEcc
Q 009664 339 QSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYCPFG 392 (529)
Q Consensus 339 ~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~p~~ 392 (529)
+++++||++.++|.++..+.....+.+|... +.....++|.++++|.|..
T Consensus 93 ~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~----n~~~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 93 FSNKLIGTFRMVLQKVVEENRVEVSDTLIDD----NNAIIKTSLSMEVRYQAAD 142 (144)
T ss_dssp SCCEEEEEEEEESHHHHHHSEEEEEEEEECT----TSCEEEEEEEEEEEEEETT
T ss_pred cCCCEEEEEEEEhHHhccCCeEEEeecccCC----CCCccccEEEEEEEecCCC
Confidence 9999999999999999776666666677542 2334458999999999854
No 38
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.67 E-value=2.1e-16 Score=167.48 Aligned_cols=120 Identities=22% Similarity=0.416 Sum_probs=105.4
Q ss_pred CcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEEEecCCCCEEEEEEEECCCC
Q 009664 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEGI 338 (529)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~l~i~v~d~~~~ 338 (529)
...|.|+|+|++|++|+.+|..|.+||||+++++ ++.++|+++++|+||.|||+|.|.+.....+.|.|+|||+|.+
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~---~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMG---SQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEET---TEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEEC---CeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 4679999999999999999999999999999996 6789999999999999999999999877777899999999999
Q ss_pred CCCceeEEEEEECcccCCCce----eeEEEEcccccccccCCccccEEEEEEEEE
Q 009664 339 QSSELIGCAQVRLCELEPGKV----KDVWLKLVKDLDVQRDTKYRGQVHLELLYC 389 (529)
Q Consensus 339 ~~d~~lG~~~i~l~~l~~~~~----~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~ 389 (529)
++|++||++.+++.++..+.. ...|+++. +...|+|++++.+.
T Consensus 461 ~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~--------~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 461 SPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLH--------EVPTGEVWVRFDLQ 507 (510)
T ss_dssp SSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECB--------SSSSCEEEEEEEEE
T ss_pred CCCCceEEEEEEHHHhccccCCCCceeeeecCC--------CCCCceEEEEEEEE
Confidence 999999999999999865443 67899874 34679999888764
No 39
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.66 E-value=4.6e-15 Score=155.31 Aligned_cols=173 Identities=19% Similarity=0.264 Sum_probs=123.1
Q ss_pred EEeccce-eeeEEEEEccccccc-CCcchHHHHHHHHHHHhhhccc-----ccccccCCCCCC------------cc-cc
Q 009664 197 YSLREKK-KLDFKLKVVGGDIST-IPGLSDSIEATIHDAIEDSITW-----PVRKIVPILPGD------------YS-EL 256 (529)
Q Consensus 197 ~~f~~~p-~l~f~l~~~g~~~~~-~P~l~~~~~~~i~~~i~~~~~~-----P~~~~ipl~~~~------------~~-~~ 256 (529)
-++...| .|++++.++. ++.. -+--...++..+..-+.+.-.+ |-.--.+...+. .. .+
T Consensus 309 ~Sv~~~P~~I~~~l~PI~-~Lv~~~~~kr~nLk~Ai~~Yl~e~~~c~~C~~PC~nn~~~l~g~~C~C~C~~~~~t~~~~C 387 (540)
T 3nsj_A 309 ASLPSNPGLVDYSLEPLH-TLLEEQNPKREALRQAISHYIMSRARWQNCSRPCRSGQHKSSHDSCQCECQDSKVTNQDCC 387 (540)
T ss_dssp HHTTTSCEEEEEEEEEGG-GGSCTTCTHHHHHHHHHHHHHHHTCBCCCTTSCCBTTEEECSSCTTCEEESCTTTBCGGGC
T ss_pred HHHhhCCceEEEEEEEHH-HhcCCcHHHHHHHHHHHHHHHHhcCchhhhcccccCCCccCCCCceEeeCCCCCCcccccc
Confidence 3444444 5889998874 3322 2333456666666666655444 211101111111 01 12
Q ss_pred cc-CcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEEEec-CCCCEEEEEEEE
Q 009664 257 EL-KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVED-ESTQHLVVRIYD 334 (529)
Q Consensus 257 ~~-~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~-~~~~~l~i~v~d 334 (529)
+. .+.|.|+|+|++|++|+. |..|++||||+++++ ++.++|+++++++||+|||+|.|.+.+ ...+.|+|+|||
T Consensus 388 ~~~~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~---~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D 463 (540)
T 3nsj_A 388 PRQRGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFG---GQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWD 463 (540)
T ss_dssp BSSTTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEET---TEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEE
T ss_pred cccCcccEEEEEEEEccCCCc-ccCCCcCeEEEEEEC---CEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEE
Confidence 22 357999999999999998 989999999999997 567999999999999999999998654 356789999999
Q ss_pred CCCCCCCceeEEEEEECcccCCCceeeEEEEcccccccccCCccccEEEEEEEEE
Q 009664 335 DEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYC 389 (529)
Q Consensus 335 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~ 389 (529)
+|..++||+||++.++|. .+ ..+.|++|. .|.|+++++..
T Consensus 464 ~D~~~~dD~LG~~~~~L~---~g-~~~~~~~l~-----------~G~l~~~~~~~ 503 (540)
T 3nsj_A 464 ADYGWDDDLLGSCDRSPH---SG-FHEVTCELN-----------HGRVKFSYHAK 503 (540)
T ss_dssp CCSSSCCEEEEEEEECCC---SE-EEEEEEECS-----------SSEEEEEEEEE
T ss_pred CCCCCCCCEEEEEEEEee---CC-cEEEEEEcC-----------CeEEEEEEEEE
Confidence 999989999999999987 23 367888762 38888887654
No 40
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.64 E-value=6.3e-16 Score=133.78 Aligned_cols=124 Identities=15% Similarity=0.110 Sum_probs=95.7
Q ss_pred CCccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhhhhhhcCCcccCCCceEEEEEEEccCCeeEeeecccCCCCCccC
Q 009664 375 DTKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLEKVLTNGEKALKSGANGTEAIELEKDASQKRREVVNDCLNPIWN 454 (529)
Q Consensus 375 ~~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wn 454 (529)
.....|+|++++.|.+.. ..+.+..+++. ..+..+.++||+++++... .+..++||+++++|+||+||
T Consensus 8 s~~~~G~l~~sl~y~~~~----------~~L~V~v~~a~-~~d~~g~sDPyv~v~l~~~-~~~~~~kT~v~~~tlnP~wn 75 (138)
T 1wfm_A 8 SWNQAPKLHYCLDYDCQK----------AELFVTRLEAV-TSNHDGGCDCYVQGSVANR-TGSVEAQTALKKRQLHTTWE 75 (138)
T ss_dssp CCSSCCEEEEEEEEETTT----------TEEEEEEEEEE-CCCCSSCCCEEEEEEEEET-TEEEEEECCCCCCCSSEECS
T ss_pred CCCcceEEEEEEEEeCCC----------CEEEEEEEEEE-cCCCCCCcceEEEEEEEcC-CCcccEecccCcCCCCCcCC
Confidence 345679999999997532 22333333333 3456678899999997542 22456899999999999999
Q ss_pred ceEEEEeecC--CCCEEEEEEEECCCCCC-CeeEEEEEecccccccceeeeEEEcCCCC
Q 009664 455 QTFDFVVEDG--LHDMLIAEVWDHDTFGK-DYMGRCILTLTRVILEGEYTDCFELDGTK 510 (529)
Q Consensus 455 e~f~f~v~~~--~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~~~~~~~w~~L~~~~ 510 (529)
|.|.|.+... ....|.|+|||++.+++ ++||++.++|+++.......+||+|.+..
T Consensus 76 E~f~f~v~~~~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 76 EGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSG 134 (138)
T ss_dssp SCEEEECCTTSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCS
T ss_pred ceEEEEecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCCC
Confidence 9999998643 45789999999999876 89999999999997556678999999754
No 41
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.62 E-value=1.3e-15 Score=129.51 Aligned_cols=102 Identities=18% Similarity=0.279 Sum_probs=86.8
Q ss_pred cccCCCceEEEEEEEccCCeeEeeecccCCCCCccCceEEEEeecCCCCEEEEEEEECCCCCCCeeEEEEEecccccccc
Q 009664 419 KALKSGANGTEAIELEKDASQKRREVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFGKDYMGRCILTLTRVILEG 498 (529)
Q Consensus 419 ~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~i~V~D~~~~~~d~lG~~~i~L~~l~~~~ 498 (529)
.+.++||+++++.. ....++||++++++.||+|||.|+|.+..+....|.|+|||++..++++||++.++|+++....
T Consensus 24 ~g~~dpyv~v~~~~--~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~~~~~~iG~~~i~l~~l~~~~ 101 (126)
T 1rlw_A 24 LDTPDPYVELFIST--TPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYVMDETLGTATFTVSSMKVGE 101 (126)
T ss_dssp HCCCCEEEEEECTT--STTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCSSCCEEEEEEEEEGGGSCTTC
T ss_pred CCCCCCEEEEEEcc--CCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCCCCCceeEEEEEEHHHccCCC
Confidence 35678999887521 1247889999999999999999999997667789999999999887789999999999998777
Q ss_pred eeeeEEEcCCCCccEEEEEEEEEe
Q 009664 499 EYTDCFELDGTKSGKLKLHLKWMP 522 (529)
Q Consensus 499 ~~~~w~~L~~~~~G~i~l~~~~~~ 522 (529)
....||+|.+.++|+|+++++..|
T Consensus 102 ~~~~~~~L~~~~~g~i~~~le~~~ 125 (126)
T 1rlw_A 102 KKEVPFIFNQVTEMVLEMSLEVAS 125 (126)
T ss_dssp EEEEEEEETTTEEEEEEEEEECCC
T ss_pred cEEEEEEcCCCceEEEEEEEEeCC
Confidence 789999999988888888886544
No 42
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.62 E-value=1.3e-15 Score=133.59 Aligned_cols=94 Identities=15% Similarity=0.274 Sum_probs=80.9
Q ss_pred ccCCCceEEEEEEEccCCeeEeeecccCCCCCccCceEEEEeecCCCCEEEEEEEECCCCCC-CeeEEEEEeccccccc-
Q 009664 420 ALKSGANGTEAIELEKDASQKRREVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFGK-DYMGRCILTLTRVILE- 497 (529)
Q Consensus 420 ~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~~- 497 (529)
+.++||+++.+ .+.+..||+++++|+||+|||.|+|.+.+ ...|.|+|||++.+++ ++||++.|+|+++..+
T Consensus 58 g~sDPYv~v~l----~~~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~ 131 (157)
T 2fk9_A 58 QLLDPYLTVSV----DQVRVGQTSTKQKTNKPTYNEEFCANVTD--GGHLELAVFHETPLGYDHFVANCTLQFQELLRTT 131 (157)
T ss_dssp CCCCEEEEEEE----TTEEEEECCCCSSCSSCEEEEEEEEEEEE--ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHH
T ss_pred CCCCeEEEEEE----CCEeeEEeeecCCCCCCccCcEEEEEcCC--CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhccc
Confidence 56789998875 23345799999999999999999999975 3589999999999886 8999999999999865
Q ss_pred ---ceeeeEEEcCCCCccEEEEEEEEE
Q 009664 498 ---GEYTDCFELDGTKSGKLKLHLKWM 521 (529)
Q Consensus 498 ---~~~~~w~~L~~~~~G~i~l~~~~~ 521 (529)
...+.||+|++ .|+|+|+++|.
T Consensus 132 ~~~~~~~~W~~L~~--~G~i~l~l~~~ 156 (157)
T 2fk9_A 132 GASDTFEGWVDLEP--EGKVFVVITLT 156 (157)
T ss_dssp TTCSEEEEEEECBS--SCEEEEEEEEC
T ss_pred CCCCcccEEEECCC--CcEEEEEEEEE
Confidence 56799999986 79999999984
No 43
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.61 E-value=4.6e-15 Score=132.07 Aligned_cols=88 Identities=20% Similarity=0.282 Sum_probs=73.9
Q ss_pred CcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCCeEeccccC-CCCCCeeccEEEEEEecCCCCEEEEEEEECCC
Q 009664 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTIN-NDLNPIWNEHFEFIVEDESTQHLVVRIYDDEG 337 (529)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~-~t~nP~Wne~f~~~v~~~~~~~l~i~v~d~~~ 337 (529)
.+.|.|+|+|++|+++. ..|.+||||++. . . ..+|++++ ++.||+|||+|.|.+.+.. ..|.|+|||+|
T Consensus 11 g~~~~L~V~V~~A~~l~---~~g~~DPYV~v~-~---~-~~kt~~~~~~t~nP~WnE~f~f~v~~~~-~~L~~~V~D~d- 80 (167)
T 2cjs_A 11 GILSLLCVGVKKAKFDG---AQEKFNTYVTLK-V---Q-NVESTTIAVRGSQPSWEQDFMFEINRLD-LGLTVEVWNKG- 80 (167)
T ss_dssp SCCCEEEEEEEEEECSS---CGGGCEEEEEEE-E---T-TEEEECCCEESSSCEEEEEEEEECCCTT-SEEEEEEEECC-
T ss_pred CceEEEEEEEEEEECCC---CCCCCCeEEEEE-e---c-ceEEEEecCCCCCCCCCCEEEEEeeCCC-CEEEEEEEECC-
Confidence 35789999999999885 257899999999 3 2 34566654 6999999999999998654 58999999999
Q ss_pred CCCCceeEEEEEECcccCC
Q 009664 338 IQSSELIGCAQVRLCELEP 356 (529)
Q Consensus 338 ~~~d~~lG~~~i~l~~l~~ 356 (529)
+++|++||++.++|.++..
T Consensus 81 ~~~dd~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 81 LIWDTMVGTVWIPLRTIRQ 99 (167)
T ss_dssp SSCCEEEEEEEEEGGGSCB
T ss_pred CCCCceEEEEEEEHHHhcc
Confidence 8899999999999999853
No 44
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=8.6e-15 Score=126.96 Aligned_cols=100 Identities=18% Similarity=0.306 Sum_probs=85.3
Q ss_pred ccCCCceEEEEEEEccCCeeEeeecccCCCCCccCceEEEEeecC---CCCEEEEEEEECCCCCC-CeeEEEEEeccccc
Q 009664 420 ALKSGANGTEAIELEKDASQKRREVVNDCLNPIWNQTFDFVVEDG---LHDMLIAEVWDHDTFGK-DYMGRCILTLTRVI 495 (529)
Q Consensus 420 ~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~---~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~ 495 (529)
+.+++|+++++ ..+++||++++++.||+|||.|+|.+.++ ....|.|+|||++.+++ ++||++.++|+++.
T Consensus 25 g~~dpyv~v~~-----~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~ 99 (140)
T 2dmh_A 25 GKPDPIVSVIF-----KDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQNKLIGTATVALKDLT 99 (140)
T ss_dssp SCCCEEEEEEC-----SSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSSSCCCCEEEEEEGGGTC
T ss_pred CCCCeEEEEEE-----CCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCCCCceEEEEEEEHHHhc
Confidence 56789998875 34679999999999999999999999754 46899999999999876 79999999999998
Q ss_pred ccceeeeEEE---cCCC----CccEEEEEEEEEeCC
Q 009664 496 LEGEYTDCFE---LDGT----KSGKLKLHLKWMPQP 524 (529)
Q Consensus 496 ~~~~~~~w~~---L~~~----~~G~i~l~~~~~~~~ 524 (529)
.......||+ |.+. ..|+|+|++.|.|.+
T Consensus 100 ~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 100 GDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPPS 135 (140)
T ss_dssp SSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCCB
T ss_pred cCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECCC
Confidence 8777789988 6542 359999999999854
No 45
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.60 E-value=1.2e-15 Score=164.34 Aligned_cols=111 Identities=29% Similarity=0.576 Sum_probs=101.2
Q ss_pred ccCcceEEEEEEEEecCCCc---cCCCCCCCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEEEecCCCCEEEEEEE
Q 009664 257 ELKPVGTLEVKLVQAKGLTN---KDLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDESTQHLVVRIY 333 (529)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~---~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~l~i~v~ 333 (529)
+..+.|.|+|+|++|++|+. +|..|++||||++++.+...++++|+++++++||+|||+|.|.+.....+.|.|+||
T Consensus 13 e~~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~ 92 (749)
T 1cjy_A 13 EHQYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLM 92 (749)
T ss_dssp CCCCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEE
T ss_pred cCCCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEE
Confidence 34678999999999999998 888899999999999865557899999999999999999999998866679999999
Q ss_pred ECCCCCCCceeEEEEEECcccCCCceeeEEEEccc
Q 009664 334 DDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVK 368 (529)
Q Consensus 334 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 368 (529)
|+|.++ |++||++.++|.++..+...+.|++|.+
T Consensus 93 D~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 93 DANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp ECCSSS-CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred ECCCCC-CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 999998 9999999999999988888899999964
No 46
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.59 E-value=5.1e-16 Score=134.92 Aligned_cols=127 Identities=20% Similarity=0.388 Sum_probs=96.1
Q ss_pred CccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhh--hhhhcCCcccCCCceEEEEEEEccCCeeEeeecccCCCCCcc
Q 009664 376 TKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLE--KVLTNGEKALKSGANGTEAIELEKDASQKRREVVNDCLNPIW 453 (529)
Q Consensus 376 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~w 453 (529)
+...|+|.+++.|.+.. ..+.+..++ .+...+..+.++||+++++.....+..++||+++++|.||+|
T Consensus 4 ~~~~G~i~~~l~y~~~~----------~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~w 73 (141)
T 1v27_A 4 GSSGGQLSIKLWFDKVG----------HQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKW 73 (141)
T ss_dssp CCCCCEEEEEEEEETTT----------TEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCC
T ss_pred CCcccEEEEEEEEeCCC----------CEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCcc
Confidence 45689999999998643 222332222 222334456788999988655444567899999999999999
Q ss_pred CceEEEEe-e--cCCCCEEEEEEEECCCCC---CCeeEEEEEecccccccceeeeEEEcCCCCccE
Q 009664 454 NQTFDFVV-E--DGLHDMLIAEVWDHDTFG---KDYMGRCILTLTRVILEGEYTDCFELDGTKSGK 513 (529)
Q Consensus 454 ne~f~f~v-~--~~~~~~L~i~V~D~~~~~---~d~lG~~~i~L~~l~~~~~~~~w~~L~~~~~G~ 513 (529)
||.|+|.+ + +.....|.|+|||++..+ +++||++.++|.++..+. ..+||+|.+...|+
T Consensus 74 ne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~~g~ 138 (141)
T 1v27_A 74 NQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQTHDSGP 138 (141)
T ss_dssp CCCCEECSCCTTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCSSCC
T ss_pred ccEEEEccCCHHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcccccCC
Confidence 99999984 3 224579999999999886 479999999999987655 78999999766553
No 47
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.59 E-value=8.1e-16 Score=134.83 Aligned_cols=125 Identities=17% Similarity=0.370 Sum_probs=95.2
Q ss_pred CCccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhhh--hhhcC-CcccCCCceEEEEEEEccCCeeEeeecccCCCCC
Q 009664 375 DTKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLEK--VLTNG-EKALKSGANGTEAIELEKDASQKRREVVNDCLNP 451 (529)
Q Consensus 375 ~~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~~--~~~~~-~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP 451 (529)
+...+|+|.+++.|.+.. ..+.+..+++ +...+ ..+.++||+++++........++||+++++|.||
T Consensus 5 ~~~~~G~l~~sl~y~~~~----------~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP 74 (148)
T 3fdw_A 5 NIFVTGRIAFSLKYEQQT----------QSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNP 74 (148)
T ss_dssp -CCCCCEEEEEEEEETTT----------TEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSC
T ss_pred CCccceEEEEEEEEeCCC----------CEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCC
Confidence 345789999999998643 2223332222 21122 3567889999987544333468999999999999
Q ss_pred ccCceEEEEeecC--CCCEEEEEEEECCCCCC-CeeEEEEEecccccccceeeeEEEcCCC
Q 009664 452 IWNQTFDFVVEDG--LHDMLIAEVWDHDTFGK-DYMGRCILTLTRVILEGEYTDCFELDGT 509 (529)
Q Consensus 452 ~wne~f~f~v~~~--~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~~~~~~~w~~L~~~ 509 (529)
+|||.|.|.+... ....|.|+|||++.+++ ++||++.++|+++.......+||+|.+.
T Consensus 75 ~wne~f~f~v~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 75 LYDETLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp EEEEEEEEECCSTTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC
T ss_pred cEeeEEEEEeChhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCc
Confidence 9999999998653 35689999999999876 8999999999999877777899999875
No 48
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.59 E-value=2.1e-15 Score=132.87 Aligned_cols=127 Identities=17% Similarity=0.292 Sum_probs=94.0
Q ss_pred CCccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhhh--hhhcCCcccCCCceEEEEEEEccCCeeEeeecccCCCCCc
Q 009664 375 DTKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLEK--VLTNGEKALKSGANGTEAIELEKDASQKRREVVNDCLNPI 452 (529)
Q Consensus 375 ~~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~ 452 (529)
.....|++.+++.|.+... .+.+..+++ +...+ .+.++||+++++........++||+++++|.||+
T Consensus 9 ~~~~~G~~~lsL~y~~~~~----------~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~ 77 (153)
T 3fbk_A 9 SHKVQGAGQLRLSIDAQDR----------VLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPA 77 (153)
T ss_dssp ----CCCCEEEEEEEESSS----------EEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCE
T ss_pred ccCCCCEEEEEEEEECCCC----------EEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCc
Confidence 4567899999999997642 223322222 22223 4678899999977555456789999999999999
Q ss_pred cCceEEEEeecC-CCCEEEEEEEECCCCC--CCeeEEEEEecccccc-cceeeeEEEcCCCCcc
Q 009664 453 WNQTFDFVVEDG-LHDMLIAEVWDHDTFG--KDYMGRCILTLTRVIL-EGEYTDCFELDGTKSG 512 (529)
Q Consensus 453 wne~f~f~v~~~-~~~~L~i~V~D~~~~~--~d~lG~~~i~L~~l~~-~~~~~~w~~L~~~~~G 512 (529)
|||.|.|.+... ....|.|+|||++.++ +++||++.++|+++.. .....+||+|.+...|
T Consensus 78 wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~g 141 (153)
T 3fbk_A 78 FHEHFFFPVQEEDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHLG 141 (153)
T ss_dssp EEEEEEEECCGGGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTGG
T ss_pred cccEEEEecccHHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhhc
Confidence 999999999422 3356999999999875 4799999999999975 5667899999976554
No 49
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.58 E-value=1.2e-15 Score=131.84 Aligned_cols=123 Identities=20% Similarity=0.396 Sum_probs=94.5
Q ss_pred cccEEEEEEEEEEcccCCCCCCCCCCCCcchhhh--hhhhcCCcccCCCceEEEEEEEccCCeeEeeecccCCCCCccCc
Q 009664 378 YRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLE--KVLTNGEKALKSGANGTEAIELEKDASQKRREVVNDCLNPIWNQ 455 (529)
Q Consensus 378 ~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wne 455 (529)
.+|+|.+++.|. . ..+.+..++ .+...+..+.+++|+++++.....+..++||++++++.||.|||
T Consensus 3 ~~G~l~~~l~~~--~----------~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne 70 (137)
T 3rdl_A 3 KRGRIYLKAEVT--D----------EKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNE 70 (137)
T ss_dssp CCCEEEEEEEEE--T----------TEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEE
T ss_pred cceEEEEEEEEc--C----------CEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCccc
Confidence 579999999983 1 122222222 22223445678899999976555567789999999999999999
Q ss_pred eEEEEeecC-CCCEEEEEEEECCCCCC-CeeEEEEEecccccccceeeeEEEcCCCCccE
Q 009664 456 TFDFVVEDG-LHDMLIAEVWDHDTFGK-DYMGRCILTLTRVILEGEYTDCFELDGTKSGK 513 (529)
Q Consensus 456 ~f~f~v~~~-~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~~~~~~~w~~L~~~~~G~ 513 (529)
.|.|.+... ....|.|+|||++..++ ++||++.++|+++...+ ..+||+|.+..+|+
T Consensus 71 ~f~f~~~~~~~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~~g~ 129 (137)
T 3rdl_A 71 SFTFKLKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQEEGE 129 (137)
T ss_dssp EEEEECCGGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCHHHHT
T ss_pred EEEEEcCchhcCCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc-cCceEECcCccccc
Confidence 999998653 34689999999998876 89999999999997765 79999999866664
No 50
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.58 E-value=1.3e-14 Score=141.71 Aligned_cols=111 Identities=32% Similarity=0.459 Sum_probs=94.1
Q ss_pred CcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCC--CeEeccccCCCCCCeeccEEEEEEecCC--CCEEEEEEEE
Q 009664 259 KPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE--KTKKSKTINNDLNPIWNEHFEFIVEDES--TQHLVVRIYD 334 (529)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~~~~~t~nP~Wne~f~~~v~~~~--~~~l~i~v~d 334 (529)
+..|.|.|+|++|++|+.+|..|.+||||++++.+.+. .+++|+++++++||.|||+|.|.+.... ...|.|+|||
T Consensus 147 p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d 226 (284)
T 2r83_A 147 PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLD 226 (284)
T ss_dssp TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEE
T ss_pred CcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEe
Confidence 46789999999999999999999999999999975433 4689999999999999999999986542 3479999999
Q ss_pred CCCCCCCceeEEEEEECccc------------CCCceeeEEEEcccc
Q 009664 335 DEGIQSSELIGCAQVRLCEL------------EPGKVKDVWLKLVKD 369 (529)
Q Consensus 335 ~~~~~~d~~lG~~~i~l~~l------------~~~~~~~~~~~L~~~ 369 (529)
++.++++++||++.+++..+ .++.....|++|.+.
T Consensus 227 ~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 227 YDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp CCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred CCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 99999999999999999763 244566789998653
No 51
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.58 E-value=2e-15 Score=129.01 Aligned_cols=119 Identities=20% Similarity=0.403 Sum_probs=87.6
Q ss_pred cccEEEEEEEEEEcccCCCCCCCCCCCCcchhhh--hhhhcCCcccCCCceEEEEEEEccCCeeEeeecccCCCCCccCc
Q 009664 378 YRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLE--KVLTNGEKALKSGANGTEAIELEKDASQKRREVVNDCLNPIWNQ 455 (529)
Q Consensus 378 ~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wne 455 (529)
.+|+|.+++.|.+.. ..+.+..++ .+...+..+.++||+++++.....+..++||+++++|.||+|||
T Consensus 3 ~~G~l~~~l~y~~~~----------~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne 72 (129)
T 2bwq_A 3 LSGQLSIKLWFDKVG----------HQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQ 72 (129)
T ss_dssp CCCEEEEEEEEETTT----------TEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEE
T ss_pred eeEEEEEEEEEccCC----------CEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCcccc
Confidence 469999999998643 222222222 22233445678899999976544456789999999999999999
Q ss_pred eEEEEe-e--cCCCCEEEEEEEECCCCC---CCeeEEEEEecccccccceeeeEEEcC
Q 009664 456 TFDFVV-E--DGLHDMLIAEVWDHDTFG---KDYMGRCILTLTRVILEGEYTDCFELD 507 (529)
Q Consensus 456 ~f~f~v-~--~~~~~~L~i~V~D~~~~~---~d~lG~~~i~L~~l~~~~~~~~w~~L~ 507 (529)
.|.|.+ + +.....|.|+|||++..+ +++||++.++|+++..++ ..+||+|+
T Consensus 73 ~f~f~~~~~~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 73 TFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp EEEECSCCGGGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred EEEEccCCHHHhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 999985 3 235679999999999886 579999999999987765 78999985
No 52
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.57 E-value=9.3e-16 Score=134.60 Aligned_cols=126 Identities=20% Similarity=0.361 Sum_probs=94.7
Q ss_pred CccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhh--hhhhcCCcccCCCceEEEEEEEccCCeeEeeecccCCCCCcc
Q 009664 376 TKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLE--KVLTNGEKALKSGANGTEAIELEKDASQKRREVVNDCLNPIW 453 (529)
Q Consensus 376 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~w 453 (529)
....|+|++.+.|.. ..+.+..++ .+...+..+.+++|+++++........++||++++++.||+|
T Consensus 16 ~~~~G~l~~~l~~~~------------~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~w 83 (149)
T 1a25_A 16 MERRGRIYIQAHIDR------------EVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEW 83 (149)
T ss_dssp -CTTCEEEEEEEESS------------SEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEE
T ss_pred CCcceEEEEEEEecC------------CEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcC
Confidence 355799999998731 122332222 222334456788999999765433467899999999999999
Q ss_pred CceEEEEeecC-CCCEEEEEEEECCCCCC-CeeEEEEEecccccccceeeeEEEcCCCCccEE
Q 009664 454 NQTFDFVVEDG-LHDMLIAEVWDHDTFGK-DYMGRCILTLTRVILEGEYTDCFELDGTKSGKL 514 (529)
Q Consensus 454 ne~f~f~v~~~-~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~~~~~~~w~~L~~~~~G~i 514 (529)
||+|+|.+... ....|.|+|||++.+++ ++||++.++|.++... ...+||+|.+..+|++
T Consensus 84 ne~f~f~v~~~~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~~~g~~ 145 (149)
T 1a25_A 84 NETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLSQEEGEY 145 (149)
T ss_dssp EEEEEEECCSGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBCHHHHTT
T ss_pred CcEEEEEeccccCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccCCCCCcc
Confidence 99999999754 35689999999999875 7999999999998765 4689999998766654
No 53
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.56 E-value=1.7e-15 Score=133.44 Aligned_cols=122 Identities=11% Similarity=0.108 Sum_probs=91.4
Q ss_pred CccccEEEEEEEEEEcccCCCCCCCCCCCCcchhh--hhhhhcCCcccCCCceEEEEEEEcc-CCeeEeeecccCCCCCc
Q 009664 376 TKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSL--EKVLTNGEKALKSGANGTEAIELEK-DASQKRREVVNDCLNPI 452 (529)
Q Consensus 376 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~l~v~~~~~~~-~~~~~kT~v~~~t~nP~ 452 (529)
....|+|++++.|.+.. ..+.+..+ +.+...+..+.++||+++++..... ...++||+++++|+||+
T Consensus 26 ~~~~G~l~~sl~y~~~~----------~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~ 95 (155)
T 2z0u_A 26 AVGATRIQIALKYDEKN----------KQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLV 95 (155)
T ss_dssp --CCEEEEEEEEEETTT----------TEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEE
T ss_pred cCCcEEEEEEEEEcCCC----------CEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCc
Confidence 35679999999997543 22223222 2333445667889999999754221 12478999999999999
Q ss_pred cCceEEEEeecC--CCCEEEEEEEECCCCCC-CeeEEEEEecccccc-cceeeeEEEcC
Q 009664 453 WNQTFDFVVEDG--LHDMLIAEVWDHDTFGK-DYMGRCILTLTRVIL-EGEYTDCFELD 507 (529)
Q Consensus 453 wne~f~f~v~~~--~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~-~~~~~~w~~L~ 507 (529)
|||+|+|.++.. ....|.|+|||++.+++ ++||++.++|+++.. .....+||+|.
T Consensus 96 wnE~F~f~v~~~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 96 FNEVFWVSMSYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEEEEEECCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred cccEEEEEcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 999999998642 35789999999999877 899999999999964 45568999986
No 54
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.56 E-value=5.7e-15 Score=127.01 Aligned_cols=95 Identities=15% Similarity=0.173 Sum_probs=78.5
Q ss_pred CcccCCCceEEEEEEEccCCeeEeeecccCCCCCccCceEEEE-eec--CCCCEEEEEEEECCCCCC-CeeEEEEEeccc
Q 009664 418 EKALKSGANGTEAIELEKDASQKRREVVNDCLNPIWNQTFDFV-VED--GLHDMLIAEVWDHDTFGK-DYMGRCILTLTR 493 (529)
Q Consensus 418 ~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~~--~~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~ 493 (529)
..+.++||+++++........++||+++++|.||+|||.|.|. +.. .....|.|+|||++.+++ ++||++.++|++
T Consensus 36 ~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~ 115 (134)
T 2b3r_A 36 DGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAESLRENFFLGGITLPLKD 115 (134)
T ss_dssp TSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGG
T ss_pred CCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEhhh
Confidence 3567889999998754445678999999999999999999999 763 256799999999999876 799999999999
Q ss_pred ccccceeeeEEEcCCCCcc
Q 009664 494 VILEGEYTDCFELDGTKSG 512 (529)
Q Consensus 494 l~~~~~~~~w~~L~~~~~G 512 (529)
+.......+||+|.+...|
T Consensus 116 l~~~~~~~~W~~L~~~~~g 134 (134)
T 2b3r_A 116 FNLSKETVKWYQLTAATYL 134 (134)
T ss_dssp SCTTSCEEEEEECBC----
T ss_pred ccCCCCcceeEECCCccCC
Confidence 9877778999999986543
No 55
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=7.4e-15 Score=127.53 Aligned_cols=123 Identities=19% Similarity=0.248 Sum_probs=93.6
Q ss_pred CccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhh--hhhhcCCcccCCCceEEEEEEEccCCeeEeeecccCCCCCcc
Q 009664 376 TKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLE--KVLTNGEKALKSGANGTEAIELEKDASQKRREVVNDCLNPIW 453 (529)
Q Consensus 376 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~w 453 (529)
....|+|++++.|.+.. ..+.+..++ .+...+..+.++||+++++.. ....++||++++++.||+|
T Consensus 9 ~~~~G~l~~~l~y~~~~----------~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~--~~~~~~kT~v~~~t~nP~w 76 (141)
T 2d8k_A 9 RENLGRIQFSVGYNFQE----------STLTVKIMKAQELPAKDFSGTSDPFVKIYLLP--DKKHKLETKVKRKNLNPHW 76 (141)
T ss_dssp CCCCCEEEEEEEECSSS----------CCEEEEEEEEESCCCCSSSSCCCEEEEEEEES--CCSSEEECCCCTTCSSCCC
T ss_pred CceeeEEEEEEEEeCCC----------CEEEEEEEEeECCCCCCCCCCCCcEEEEEEEC--CCCccEeCceEcCCCCCcc
Confidence 45679999999997543 223333222 222334456788999988742 2346789999999999999
Q ss_pred CceEEEEe-e--cCCCCEEEEEEEECCCCCC-CeeEEEEEecccccccceeeeEEEcCCCC
Q 009664 454 NQTFDFVV-E--DGLHDMLIAEVWDHDTFGK-DYMGRCILTLTRVILEGEYTDCFELDGTK 510 (529)
Q Consensus 454 ne~f~f~v-~--~~~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~~~~~~~w~~L~~~~ 510 (529)
||.|.|.+ + +.....|.|+|||++.+++ ++||++.++|+++........||+|.+..
T Consensus 77 ne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 77 NETFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp CEEEEECSCCHHHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred ccEEEECccCHHHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 99999985 2 2246789999999999876 89999999999998877789999998653
No 56
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.56 E-value=8.7e-15 Score=128.82 Aligned_cols=122 Identities=17% Similarity=0.229 Sum_probs=93.5
Q ss_pred CccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhh--hhhhcCCcccCCCceEEEEEEEccCCeeEeeecccCCCCCcc
Q 009664 376 TKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLE--KVLTNGEKALKSGANGTEAIELEKDASQKRREVVNDCLNPIW 453 (529)
Q Consensus 376 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~w 453 (529)
....|+|++++.|.+.. ..+.+..++ .+...+..+.+++|+++++.. .+.+++||+++++|.||+|
T Consensus 25 ~~~~G~l~~~l~y~~~~----------~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~--~~~~~~kT~v~~~t~nP~w 92 (152)
T 1rsy_A 25 EEKLGKLQYSLDYDFQN----------NQLLVGIIQAAELPALDMGGTSDPYVKVFLLP--DKKKKFETKVHRKTLNPVF 92 (152)
T ss_dssp -CCCCEEEEEEEEETTT----------TEEEEEEEEEESCCCCSTTSCCCEEEEEEEET--TCCSCEECCCCTTCSSCEE
T ss_pred CCCceEEEEEEEEeCCC----------CEEEEEEEEeECCCCccCCCCcCeEEEEEEEc--CCCceEeccccCCCCCCcC
Confidence 45679999999998643 222333222 222334456788999998652 2346789999999999999
Q ss_pred CceEEEEeecC--CCCEEEEEEEECCCCCC-CeeEEEEEecccccccceeeeEEEcCCC
Q 009664 454 NQTFDFVVEDG--LHDMLIAEVWDHDTFGK-DYMGRCILTLTRVILEGEYTDCFELDGT 509 (529)
Q Consensus 454 ne~f~f~v~~~--~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~~~~~~~w~~L~~~ 509 (529)
||.|.|.+... ....|.|+|||++.+++ ++||++.++|+++.......+||+|.+.
T Consensus 93 ne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 93 NEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp EEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred cccEEEeecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 99999998643 46899999999999875 8999999999999777778999999864
No 57
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.55 E-value=1.2e-14 Score=125.24 Aligned_cols=101 Identities=21% Similarity=0.308 Sum_probs=85.5
Q ss_pred cccCCCceEEEEEEEccCCeeEeeeccc-CCCCCccCceEEEEeecCCCCEEEEEEEECCCCCC-CeeEEEEEecccccc
Q 009664 419 KALKSGANGTEAIELEKDASQKRREVVN-DCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFGK-DYMGRCILTLTRVIL 496 (529)
Q Consensus 419 ~~~~~~~l~v~~~~~~~~~~~~kT~v~~-~t~nP~wne~f~f~v~~~~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~ 496 (529)
.+.++||+++++ ..+++||++++ ++.||+|||.|+|.+.+ ....|.|+|||++.+++ ++||++.++|+++..
T Consensus 28 ~g~~dpyv~v~~-----~~~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~~~~d~~lG~~~i~l~~l~~ 101 (136)
T 1wfj_A 28 LNNMDPYVQLTC-----RTQDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDVGTEDDAVGEATIPLEPVFV 101 (136)
T ss_dssp SCSSCCCEEEES-----SSCEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSSCTTTCCSEEEEEESHHHHH
T ss_pred CCCcCceEEEEE-----CCccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCCCCCCceEEEEEEEHHHhcc
Confidence 457789998874 44578999998 89999999999999987 67799999999998876 899999999999965
Q ss_pred cc-eeeeEEEcC--CCCccEEEEEEEEEeCCC
Q 009664 497 EG-EYTDCFELD--GTKSGKLKLHLKWMPQPI 525 (529)
Q Consensus 497 ~~-~~~~w~~L~--~~~~G~i~l~~~~~~~~~ 525 (529)
.+ ...+||+|. +...|+|+|++.|.|...
T Consensus 102 ~~~~~~~w~~L~~~~~~~G~i~l~l~~~p~~~ 133 (136)
T 1wfj_A 102 EGSIPPTAYNVVKDEEYKGEIWVALSFKPSGP 133 (136)
T ss_dssp HSEEEEEEEEEEETTEEEEEEEEEEEEEECCS
T ss_pred CCCCCcEEEEeecCCccCEEEEEEEEEEeCCC
Confidence 44 358999995 446799999999999653
No 58
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.55 E-value=1.7e-14 Score=127.13 Aligned_cols=103 Identities=20% Similarity=0.348 Sum_probs=82.7
Q ss_pred cccCCCceEEEEEEEcc-CCeeEeeecccCCCCCccCceEEEEeecCCCCEEEEEEEECCCCCC-CeeEEEEEecccccc
Q 009664 419 KALKSGANGTEAIELEK-DASQKRREVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFGK-DYMGRCILTLTRVIL 496 (529)
Q Consensus 419 ~~~~~~~l~v~~~~~~~-~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~ 496 (529)
.+.+++|+++++..... ...++||+++++|.||+|||.|.|.+.+ ....|.|+|||++..++ ++||++.++|+++..
T Consensus 38 ~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~l~~~V~d~d~~~~d~~iG~~~i~l~~l~~ 116 (153)
T 3b7y_A 38 LGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHP-QQHRLLFEVFDENRLTRDDFLGQVDVPLYPLPT 116 (153)
T ss_dssp ---CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECT-TTCEEEEEEEECCSSSCCEEEEEEEEECCSCCB
T ss_pred CCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecC-CCCEEEEEEEECCCCcCCCeeEEEEEEHHHccc
Confidence 35678999998753111 1367899999999999999999999976 45789999999999876 899999999999976
Q ss_pred ccee------eeEEEcCC-----CCccEEEEEEEEEe
Q 009664 497 EGEY------TDCFELDG-----TKSGKLKLHLKWMP 522 (529)
Q Consensus 497 ~~~~------~~w~~L~~-----~~~G~i~l~~~~~~ 522 (529)
.... .+||+|.+ ...|+|+|++.|.|
T Consensus 117 ~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 117 ENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred CCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 5432 59999964 34799999999986
No 59
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.55 E-value=2.4e-14 Score=123.39 Aligned_cols=95 Identities=17% Similarity=0.359 Sum_probs=81.2
Q ss_pred ccCCCceEEEEEEEccCCeeEeeecccCCCCCccCceEEEEeecCCCCEEEEEEEECCCCCC-CeeEEEEEecccccccc
Q 009664 420 ALKSGANGTEAIELEKDASQKRREVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFGK-DYMGRCILTLTRVILEG 498 (529)
Q Consensus 420 ~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~~~ 498 (529)
+.++||+++.+ .+....+|+++++|+||+|||.|+|.+.+. ..|.|+|||++..++ ++||++.++|+++..++
T Consensus 36 ~~~DPyv~v~l----~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~ 109 (136)
T 1gmi_A 36 FLLDPYIALNV----DDSRIGQTATKQKTNSPAWHDEFVTDVCNG--RKIELAVFHDAPIGYDDFVANCTIQFEELLQNG 109 (136)
T ss_dssp CCCCEEEEEEE----TTEEEEECCCCSSCSSCEEEEEEEEEEEEE--CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTT
T ss_pred cCcCcEEEEEE----CCeEeeeeeEECCCcCCccCCEEEEEecCC--CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccC
Confidence 34789999875 233457999999999999999999999865 789999999998876 79999999999998753
Q ss_pred --eeeeEEEcCCCCccEEEEEEEEEe
Q 009664 499 --EYTDCFELDGTKSGKLKLHLKWMP 522 (529)
Q Consensus 499 --~~~~w~~L~~~~~G~i~l~~~~~~ 522 (529)
..+.|++|++ .|+|+|+++|.+
T Consensus 110 ~~~~~~w~~L~~--~G~i~l~l~~~~ 133 (136)
T 1gmi_A 110 SRHFEDWIDLEP--EGKVYVIIDLSG 133 (136)
T ss_dssp CSEEEEEEECBS--SCEEEEEEEEEE
T ss_pred CCCccEEEEcCC--CeEEEEEEEEEe
Confidence 3589999986 699999999976
No 60
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.54 E-value=1.5e-14 Score=125.89 Aligned_cols=121 Identities=17% Similarity=0.213 Sum_probs=93.0
Q ss_pred CccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhhh--hhhcCCcccCCCceEEEEEEEccCCeeEeeecccCCCCCcc
Q 009664 376 TKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLEK--VLTNGEKALKSGANGTEAIELEKDASQKRREVVNDCLNPIW 453 (529)
Q Consensus 376 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~w 453 (529)
....|+|++++.|.+.. ..+.+..+++ +...+..+.+++|+++++... ..+++||+++++|.||+|
T Consensus 17 ~~~~G~l~~~l~y~~~~----------~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~--~~~~~kT~v~~~t~nP~w 84 (143)
T 3f04_A 17 VEKLGKLQYSLDYDFQN----------NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPD--KKKKFETKVHRKTLNPVF 84 (143)
T ss_dssp CCCCCEEEEEEEEETTT----------TEEEEEEEEEECCCCBGGGBCCCEEEEEEEESC--CSCCEECCCCCSCSSCEE
T ss_pred ccCeEEEEEEEEEeCCC----------CEEEEEEEEecCCCCCCCCCCcCcEEEEEEECC--CCccEECccCcCCCCCcC
Confidence 45679999999998643 2222222222 222334567889999987432 345789999999999999
Q ss_pred CceEEEEeecC--CCCEEEEEEEECCCCCC-CeeEEEEEecccccccceeeeEEEcCC
Q 009664 454 NQTFDFVVEDG--LHDMLIAEVWDHDTFGK-DYMGRCILTLTRVILEGEYTDCFELDG 508 (529)
Q Consensus 454 ne~f~f~v~~~--~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~~~~~~~w~~L~~ 508 (529)
||.|.|.+... ....|.|+|||++.+++ ++||++.++|+++.......+||+|..
T Consensus 85 ne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 85 NEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp EEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred cCeEEEeecHhhcCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 99999998633 56899999999999876 899999999999988777899999975
No 61
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.54 E-value=5.5e-14 Score=150.50 Aligned_cols=124 Identities=17% Similarity=0.306 Sum_probs=102.0
Q ss_pred cceEEEEEEEEecCCCccCC--CCCCCcEEEEEEecC--CCCeEeccccCCC-CCCeeccEEEEEEecCCCCEEEEEEEE
Q 009664 260 PVGTLEVKLVQAKGLTNKDL--IGKSDPYAVLFVRPL--PEKTKKSKTINND-LNPIWNEHFEFIVEDESTQHLVVRIYD 334 (529)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~--~g~~dpyv~v~~~~~--~~~~~kT~~~~~t-~nP~Wne~f~~~v~~~~~~~l~i~v~d 334 (529)
..+.|+|+|++|++|+..+. .|.+||||++.+.+. ...++||++++++ .||+|||+|.|.+..+....|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 56899999999999999874 688999999999632 2357899999987 999999999999987665689999999
Q ss_pred CCCCCCCceeEEEEEECcccCCCceeeEEEEcccccccccCCccccEEEEEEEEE
Q 009664 335 DEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYC 389 (529)
Q Consensus 335 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~ 389 (529)
+|.+++|++||++.++|..+..|. .|++|.... ...-..|.|.+.+.|.
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~---g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSKN---GDQHPSATLFVKISIQ 623 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECTT---SCEEEEEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCCC---cCCCCceEEEEEEEEE
Confidence 999999999999999999998753 588885421 1112457888888774
No 62
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=5e-15 Score=128.81 Aligned_cols=125 Identities=17% Similarity=0.268 Sum_probs=94.3
Q ss_pred CCccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhh--hhhhcCCcccCCCceEEEEEEEccCCeeEeeecccCCCCCc
Q 009664 375 DTKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLE--KVLTNGEKALKSGANGTEAIELEKDASQKRREVVNDCLNPI 452 (529)
Q Consensus 375 ~~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~ 452 (529)
.....|+|++++.|.+.. ..+.+..++ .+...+..+ ++||+++++........++||+++++|.||+
T Consensus 6 ~~~~~G~l~~~l~y~~~~----------~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~ 74 (142)
T 2dmg_A 6 SGSPLGQIQLTIRHSSQR----------NKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPV 74 (142)
T ss_dssp CSCSSCEEEEEEEEETTT----------TEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCE
T ss_pred CCCCcceEEEEEEEeCCC----------CEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCC
Confidence 345679999999998643 222232222 222334455 8899999976544445789999999999999
Q ss_pred cCceEEEEeecC--CCCEEEEEEEECCCCC--C-CeeEEEEEecccccccceeeeEEEcCCCC
Q 009664 453 WNQTFDFVVEDG--LHDMLIAEVWDHDTFG--K-DYMGRCILTLTRVILEGEYTDCFELDGTK 510 (529)
Q Consensus 453 wne~f~f~v~~~--~~~~L~i~V~D~~~~~--~-d~lG~~~i~L~~l~~~~~~~~w~~L~~~~ 510 (529)
|||.|.|.+... ....|.|+|||++.++ + ++||++.++|+++.......+||+|.+..
T Consensus 75 wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~ 137 (142)
T 2dmg_A 75 FDQSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDS 137 (142)
T ss_dssp EEEEEEECCCHHHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSC
T ss_pred cCceEEEEecHHHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCCC
Confidence 999999998532 3468999999999875 3 59999999999987766778999998753
No 63
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.53 E-value=5.3e-14 Score=123.17 Aligned_cols=97 Identities=24% Similarity=0.474 Sum_probs=81.9
Q ss_pred CcccCCCceEEEEEEEccCCeeEeeecccCCCCCccCceEEEEeecCCCCEEEEEEEECCCC-----------CC-CeeE
Q 009664 418 EKALKSGANGTEAIELEKDASQKRREVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTF-----------GK-DYMG 485 (529)
Q Consensus 418 ~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~i~V~D~~~~-----------~~-d~lG 485 (529)
..+.++||+.+++ +.+++||+++++|.||.|||.|.|.+.++ .+.|.|+|||++.. ++ ++||
T Consensus 34 ~~g~~dpyv~v~~-----~~~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG 107 (148)
T 3kwu_A 34 KTGSSDPYVTVQV-----GKTKKRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDDIKSRVKQRFKRESDDFLG 107 (148)
T ss_dssp TTSCCCEEEEEEE-----TTEEEECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCSHHHHHHTTTSSCSSEEEE
T ss_pred CCCCcCeEEEEEE-----CCEEEECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCCccccccccccCCCCccEE
Confidence 3467889998886 56789999999999999999999999764 47899999999985 44 8999
Q ss_pred EEEEecccccccceeeeEEEcCC-----CCccEEEEEEEEEe
Q 009664 486 RCILTLTRVILEGEYTDCFELDG-----TKSGKLKLHLKWMP 522 (529)
Q Consensus 486 ~~~i~L~~l~~~~~~~~w~~L~~-----~~~G~i~l~~~~~~ 522 (529)
++.++|+++ .....+||+|.. ...|+|+|++.+.-
T Consensus 108 ~~~i~l~~l--~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e~ 147 (148)
T 3kwu_A 108 QTIIEVRTL--SGEMDVWYNLDKRTDKSAVSGAIRLHISVEI 147 (148)
T ss_dssp EEEEEGGGC--CSEEEEEEECBCSSTTCCCCCEEEEEEEEEC
T ss_pred EEEEEHHHC--cCCCCEEEEcccCCCCCCCceEEEEEEEEEe
Confidence 999999998 345689999984 24699999998863
No 64
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=1.8e-14 Score=125.96 Aligned_cols=123 Identities=15% Similarity=0.152 Sum_probs=91.6
Q ss_pred CCccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhhh--hhh-cC------CcccCCCceEEEEEEEccCCeeEeeecc
Q 009664 375 DTKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLEK--VLT-NG------EKALKSGANGTEAIELEKDASQKRREVV 445 (529)
Q Consensus 375 ~~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~~--~~~-~~------~~~~~~~~l~v~~~~~~~~~~~~kT~v~ 445 (529)
.....|+|++++.|.+.. ..+.+..+++ +.. .+ ..+.++||+++++... ..+++||+++
T Consensus 8 ~~~~~G~l~~~l~y~~~~----------~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~--~~~~~kT~v~ 75 (147)
T 2enp_A 8 SKYQLGMLHFSTQYDLLH----------NHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPD--QKNSKQTGVK 75 (147)
T ss_dssp SCCCCCEEEEEEEEETTT----------TEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETC--CSSCEECCCC
T ss_pred CCCcceEEEEEEEEcCCC----------CEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeC--CCcceEeecc
Confidence 446789999999998643 2222222222 111 01 1246889999987532 2357899999
Q ss_pred cCCCCCccCceEEEEeecC--CCCEEEEEEEECCCCCC-CeeEEEEEecccccccceeeeEEEcCCC
Q 009664 446 NDCLNPIWNQTFDFVVEDG--LHDMLIAEVWDHDTFGK-DYMGRCILTLTRVILEGEYTDCFELDGT 509 (529)
Q Consensus 446 ~~t~nP~wne~f~f~v~~~--~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~~~~~~~w~~L~~~ 509 (529)
+++.||+|||.|.|.+... ....|.|+|||++.+++ ++||++.++|+++........|++|.+.
T Consensus 76 ~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 142 (147)
T 2enp_A 76 RKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPS 142 (147)
T ss_dssp CSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCC
T ss_pred cCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecC
Confidence 9999999999999998642 34689999999999876 7999999999999776667899999864
No 65
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.51 E-value=2e-14 Score=127.48 Aligned_cols=126 Identities=19% Similarity=0.305 Sum_probs=92.2
Q ss_pred CccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhh--hhhhcCCcccCCCceEEEEEEEccCCeeEeeecccCCCCCcc
Q 009664 376 TKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLE--KVLTNGEKALKSGANGTEAIELEKDASQKRREVVNDCLNPIW 453 (529)
Q Consensus 376 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~w 453 (529)
....|+|++++.|.+.. ..+.+..++ .+...+..+.++||+++++........++||+++++|.||+|
T Consensus 8 ~~~~G~l~~~l~y~~~~----------~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~w 77 (159)
T 1tjx_A 8 LEKLGDICFSLRYVPTA----------GKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYY 77 (159)
T ss_dssp GGCCCEEEEEEEEETTT----------TEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEE
T ss_pred cCcCCeEEEEEEEcCCC----------CEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcc
Confidence 45679999999998643 222332222 222334456789999998754322335789999999999999
Q ss_pred CceEEEEeecC--CCCEEEEEEEECCCCCC-CeeEEEEEecccc----------ccc--ceeeeEEEcCCCCc
Q 009664 454 NQTFDFVVEDG--LHDMLIAEVWDHDTFGK-DYMGRCILTLTRV----------ILE--GEYTDCFELDGTKS 511 (529)
Q Consensus 454 ne~f~f~v~~~--~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l----------~~~--~~~~~w~~L~~~~~ 511 (529)
||.|.|.+... ....|.|+|||++.+++ ++||++.++++.+ ... ....+||+|.+...
T Consensus 78 ne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~~~ 150 (159)
T 1tjx_A 78 NESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEEE 150 (159)
T ss_dssp EEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCHHH
T ss_pred cceEEEEcCHHHhCCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCccc
Confidence 99999998643 35689999999999875 8999999999953 322 34689999987533
No 66
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.50 E-value=1.7e-13 Score=123.62 Aligned_cols=104 Identities=19% Similarity=0.347 Sum_probs=80.0
Q ss_pred cccCCCceEEEEEEEccC-CeeEeeecccCCCCCccCceEEEEeecCCCCEEEEEEEECCCCCC-CeeEEEEEecccccc
Q 009664 419 KALKSGANGTEAIELEKD-ASQKRREVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFGK-DYMGRCILTLTRVIL 496 (529)
Q Consensus 419 ~~~~~~~l~v~~~~~~~~-~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~ 496 (529)
.+.+++|+++++.....+ ..++||++++++.||.|||.|.|.+.. ....|.|+|||++.+++ ++||++.++|.++..
T Consensus 26 ~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~-~~~~L~~~V~d~d~~~~d~~lG~~~i~l~~l~~ 104 (176)
T 3m7f_B 26 LGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLP-QRHRILFEVFDENRLTRDDFLGQVDVPLYPLPT 104 (176)
T ss_dssp CCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECT-TTCEEEEEEEECC----CEEEEEEEEESCSCCB
T ss_pred CCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcC-CCCEEEEEEEECCCCCCCcEEEEEEEEHHHccc
Confidence 456889999987542111 157899999999999999999999974 45789999999998876 899999999999987
Q ss_pred ccee-e-----eEEEcCCC-----CccEEEEEEEEEeC
Q 009664 497 EGEY-T-----DCFELDGT-----KSGKLKLHLKWMPQ 523 (529)
Q Consensus 497 ~~~~-~-----~w~~L~~~-----~~G~i~l~~~~~~~ 523 (529)
.... . +||+|... ..|+|+|++.|.|.
T Consensus 105 ~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 105 ENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp C------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred cCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 6443 2 89999742 47999999999985
No 67
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.50 E-value=2.7e-14 Score=123.40 Aligned_cols=117 Identities=21% Similarity=0.303 Sum_probs=84.0
Q ss_pred ccEEEEEEEEEEcccCCCCCCCCCCCCcchhhh--hhhhcCCcccCCCceEEEEEEEccCCeeEeeecccCCCCCccCce
Q 009664 379 RGQVHLELLYCPFGMENVFTNPFAPNFSMTSLE--KVLTNGEKALKSGANGTEAIELEKDASQKRREVVNDCLNPIWNQT 456 (529)
Q Consensus 379 ~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wne~ 456 (529)
+|+|.+++.|.+.. ..+.+..++ .+...+..+.+++|+++++........++||++++++.||+|||.
T Consensus 2 ~G~l~~sl~y~~~~----------~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~ 71 (138)
T 3n5a_A 2 RGELLLSLCYNPSA----------NSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNES 71 (138)
T ss_dssp CCEEEEEEEEETTT----------TEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEE
T ss_pred CcEEEEEEEEcCCC----------CeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcce
Confidence 69999999998643 222222222 222234456788999998765433446789999999999999999
Q ss_pred EEEEeecC--CCCEEEEEEEECCCCCC-CeeEEEEEecccccccceeeeEEEcC
Q 009664 457 FDFVVEDG--LHDMLIAEVWDHDTFGK-DYMGRCILTLTRVILEGEYTDCFELD 507 (529)
Q Consensus 457 f~f~v~~~--~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~~~~~~~w~~L~ 507 (529)
|.|.+... ....|.|+|||++.+++ ++||++.++|+++. ....+|++|.
T Consensus 72 f~f~v~~~~l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~--~~~~~W~~l~ 123 (138)
T 3n5a_A 72 FAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGP--GEVKHWKDMI 123 (138)
T ss_dssp EEEECCGGGGGGEEEEEEEEECCSSSCCEEEEEEEESSSSCH--HHHHHHHHHH
T ss_pred EEEECChhhcCceEEEEEEEECCCCCCCcEEEEEEEccccCC--hHHHHHHHHH
Confidence 99998643 34689999999999876 79999999999743 1224455444
No 68
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.50 E-value=1.8e-14 Score=129.37 Aligned_cols=121 Identities=15% Similarity=0.207 Sum_probs=90.2
Q ss_pred CccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhh--hhhhcCC-cccCCCceEEEEEEEccCCeeEeeecccCCCCCc
Q 009664 376 TKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLE--KVLTNGE-KALKSGANGTEAIELEKDASQKRREVVNDCLNPI 452 (529)
Q Consensus 376 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~--~~~~~~~-~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~ 452 (529)
....|+|++++.|. . ..+.+..++ .+...+. .+.+++|+++++........++||+++++|.||+
T Consensus 15 ~~~~G~l~~~l~y~-~-----------~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~ 82 (171)
T 2q3x_A 15 TPAMGDIQIGMEDK-K-----------GQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPL 82 (171)
T ss_dssp --CCCEEEEEEEEE-T-----------TEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCE
T ss_pred CCCccEEEEEEEEC-C-----------CEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCC
Confidence 34579999999993 1 122332222 2222332 4678899999876532223578999999999999
Q ss_pred cCceEEEEeecCCCCEEEEEEE-ECCCCCC-CeeEEEEEecccccccceeeeEEEcCCC
Q 009664 453 WNQTFDFVVEDGLHDMLIAEVW-DHDTFGK-DYMGRCILTLTRVILEGEYTDCFELDGT 509 (529)
Q Consensus 453 wne~f~f~v~~~~~~~L~i~V~-D~~~~~~-d~lG~~~i~L~~l~~~~~~~~w~~L~~~ 509 (529)
|||+|+|.+.. ....|.|+|| |++.+++ ++||++.++|+++.......+||+|.+.
T Consensus 83 wne~f~f~v~~-~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 83 YQQSLVFDESP-QGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp EEEEEECSSCC-TTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCcEEEEEecC-CCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 99999999853 5678999999 9999876 8999999999999877778999999864
No 69
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.49 E-value=3.3e-14 Score=122.04 Aligned_cols=97 Identities=24% Similarity=0.390 Sum_probs=81.7
Q ss_pred CcccCCCceEEEEEEEccCCeeEeeecccCCCCCccCceEEEEeecCCCCEEEEEEEECCCCCC-CeeEEEEEecccccc
Q 009664 418 EKALKSGANGTEAIELEKDASQKRREVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFGK-DYMGRCILTLTRVIL 496 (529)
Q Consensus 418 ~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~ 496 (529)
..+.++||+++.+ +.+++||++++++.||.|||.|.|.+.+. ...|.|+|||++..++ ++||++.++|+++..
T Consensus 30 ~~g~~dpyv~v~~-----~~~~~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~ 103 (133)
T 2ep6_A 30 FSGKSDPFCLLEL-----GNDRLQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRD 103 (133)
T ss_dssp SSSCCCEEEEEEE-----TTEEEECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEEETTEEEEECCBCEEEGGGCCS
T ss_pred CCCCcCeEEEEEE-----CCEEEEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEECCCCCCCCeeEEEEEEHHHccC
Confidence 3457789998875 44678999999999999999999999864 5789999999999865 899999999999865
Q ss_pred cceeeeEEEcCC-----CCccEEEEEEEEEe
Q 009664 497 EGEYTDCFELDG-----TKSGKLKLHLKWMP 522 (529)
Q Consensus 497 ~~~~~~w~~L~~-----~~~G~i~l~~~~~~ 522 (529)
.. .+||+|.+ ...|+|+|+++|..
T Consensus 104 ~~--~~w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 104 GQ--PNCYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp SC--CEECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred CC--ceEEEeecCCCCCccceEEEEEEEEEe
Confidence 33 58999974 35799999998863
No 70
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.49 E-value=3.5e-15 Score=129.79 Aligned_cols=123 Identities=20% Similarity=0.369 Sum_probs=91.3
Q ss_pred CccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhh--hhhhcCCcccCCCceEEEEEEEccC---------CeeEeeec
Q 009664 376 TKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLE--KVLTNGEKALKSGANGTEAIELEKD---------ASQKRREV 444 (529)
Q Consensus 376 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~v~~~~~~~~---------~~~~kT~v 444 (529)
...+|+|++++.|.. ..+.+..++ .+...+..+.++||+++++...... ..++||++
T Consensus 3 ~~~~G~i~~~l~y~~------------~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v 70 (142)
T 1rh8_A 3 HPITGEIQLQINYDL------------GNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKY 70 (142)
T ss_dssp CCCCCEEEEEEEEET------------TEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTT
T ss_pred CCcceEEEEEEEEcC------------CEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccc
Confidence 346899999999971 122333222 2223345677899999886322111 13679999
Q ss_pred ccCCCCCccCceEEEE-ee--cCCCCEEEEEEEECCCCCC-CeeEEEEEecccccccceeeeEEEcCCCC
Q 009664 445 VNDCLNPIWNQTFDFV-VE--DGLHDMLIAEVWDHDTFGK-DYMGRCILTLTRVILEGEYTDCFELDGTK 510 (529)
Q Consensus 445 ~~~t~nP~wne~f~f~-v~--~~~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~~~~~~~w~~L~~~~ 510 (529)
+++|.||+|||.|.|. +. +.....|.|+|||++.+++ ++||++.++|+++.......+||+|.+..
T Consensus 71 ~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 140 (142)
T 1rh8_A 71 VQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT 140 (142)
T ss_dssp THHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred cCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccC
Confidence 9999999999999997 54 3356799999999999876 89999999999997766678999999754
No 71
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.48 E-value=7.2e-15 Score=144.27 Aligned_cols=97 Identities=32% Similarity=0.424 Sum_probs=85.0
Q ss_pred cCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCC--CCeEeccccCCCCCCeeccEEEEEEecC--CCCEEEEEEE
Q 009664 258 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIY 333 (529)
Q Consensus 258 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~l~i~v~ 333 (529)
.+..|.|+|+|++|++|+.+|..|.+||||++++.+.+ ..+++|+++++++||.|||+|.|.+... ....|.|+||
T Consensus 148 ~~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~ 227 (296)
T 1dqv_A 148 LPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVV 227 (296)
T ss_dssp ETTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEE
T ss_pred ccccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEE
Confidence 35679999999999999999999999999999997533 2578999999999999999999988653 2347999999
Q ss_pred ECCCCCCCceeEEEEEECccc
Q 009664 334 DDEGIQSSELIGCAQVRLCEL 354 (529)
Q Consensus 334 d~~~~~~d~~lG~~~i~l~~l 354 (529)
|++.+++|++||++.+++.++
T Consensus 228 d~d~~~~~~~iG~~~i~l~~~ 248 (296)
T 1dqv_A 228 DYDCIGHNEVIGVCRVGPEAA 248 (296)
T ss_dssp ECCSSSCCEEEEECCCSSCTT
T ss_pred eCCCCCCCceEEEEEECCccC
Confidence 999999999999999999875
No 72
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.48 E-value=3.7e-14 Score=123.20 Aligned_cols=124 Identities=18% Similarity=0.315 Sum_probs=91.9
Q ss_pred CCccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhh--hhhhcCCcccCCCceEEEEEEEccCCeeEeeecccCCCCCc
Q 009664 375 DTKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLE--KVLTNGEKALKSGANGTEAIELEKDASQKRREVVNDCLNPI 452 (529)
Q Consensus 375 ~~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~ 452 (529)
.....|+|.+++.|.+.. ..+.+..++ .+...+..+.++||+++++........++||++++++.||+
T Consensus 11 ~~~~~G~l~~~l~y~~~~----------~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~ 80 (142)
T 2chd_A 11 QATTLGALEFSLLYDQDN----------SNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPV 80 (142)
T ss_dssp ---CCCEEEEEEEEEGGG----------TEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCE
T ss_pred CCCccceEEEEEEEeCCC----------CEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCc
Confidence 345679999999998643 122222222 22233445678899999875433335789999999999999
Q ss_pred cCceEEEE-eec--CCCCEEEEEEEECCCCCC-CeeEEEEEecccccccceeeeEEEcCC
Q 009664 453 WNQTFDFV-VED--GLHDMLIAEVWDHDTFGK-DYMGRCILTLTRVILEGEYTDCFELDG 508 (529)
Q Consensus 453 wne~f~f~-v~~--~~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~~~~~~~w~~L~~ 508 (529)
|||.|.|. +.. .....|.|+|||++.+++ ++||++.++|+++.......-|++|+.
T Consensus 81 wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 81 WNETLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EEEEEEEESCCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred CcCEEEEcccCHHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 99999998 542 224789999999999877 899999999999987777788888875
No 73
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.47 E-value=5.3e-14 Score=123.90 Aligned_cols=121 Identities=17% Similarity=0.161 Sum_probs=81.7
Q ss_pred CccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhh--hhhhcCCcccCCCceEEEEEEEccCCeeEeeecccCCCCCcc
Q 009664 376 TKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLE--KVLTNGEKALKSGANGTEAIELEKDASQKRREVVNDCLNPIW 453 (529)
Q Consensus 376 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~w 453 (529)
....|+|.+++.|.|.. ..+.+..++ .+...+..+.+++|+++++........++||+++++|.||+|
T Consensus 13 ~~~~G~l~~~l~y~~~~----------~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~w 82 (153)
T 1w15_A 13 PSGRGELLVSLCYQSTT----------NTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVF 82 (153)
T ss_dssp ---CCEEEEEEEEETTT----------TEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEE
T ss_pred CccccEEEEEEEEcCCC----------CEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCee
Confidence 45679999999998643 222222222 222234456788999999765332234789999999999999
Q ss_pred CceEEEEeecC--CCCEEEEEEEECCCCCC-CeeEEEEEecccccccceeeeEEEcCC
Q 009664 454 NQTFDFVVEDG--LHDMLIAEVWDHDTFGK-DYMGRCILTLTRVILEGEYTDCFELDG 508 (529)
Q Consensus 454 ne~f~f~v~~~--~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~~~~~~~w~~L~~ 508 (529)
||.|+|.+... ....|.|+|||++.+++ ++||++.++|++. .....+||+|..
T Consensus 83 ne~f~f~v~~~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~~--~~~~~~W~~l~~ 138 (153)
T 1w15_A 83 NELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATAE--GSGGGHWKEICD 138 (153)
T ss_dssp EEEEEEECCSSSSTTEEEEEEEEECCTTSCCEEEEEEEESTTCC--SHHHHHHHHHHH
T ss_pred cceEEEECCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCC--chHHHHHHHHHh
Confidence 99999999754 34689999999998876 8999999999982 222344555443
No 74
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.46 E-value=2.1e-13 Score=117.87 Aligned_cols=123 Identities=16% Similarity=0.210 Sum_probs=90.4
Q ss_pred CCccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhh--hhhhcCC-cccCCCceEEEEEEEccCCeeEeeecccCCCCC
Q 009664 375 DTKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLE--KVLTNGE-KALKSGANGTEAIELEKDASQKRREVVNDCLNP 451 (529)
Q Consensus 375 ~~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~--~~~~~~~-~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP 451 (529)
.....|+|.+++.|.+... .+.+..++ .+...+. .+.++||+++++.. .+..++||+++++|.||
T Consensus 4 ~~~~~G~l~~~l~y~~~~~----------~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~--~~~~~~kT~v~~~t~nP 71 (138)
T 1ugk_A 4 GSSGLGTLFFSLEYNFERK----------AFVVNIKEARGLPAMDEQSMTSDPYIKMTILP--EKKHKVKTRVLRKTLDP 71 (138)
T ss_dssp CCCCCCEEEEEEEEEGGGT----------EEEEEEEEEESCCCCBTTTTBCEEEEEEEEET--TTCSEEECCCCSSCSSC
T ss_pred CCCccEEEEEEEEEECCCC----------EEEEEEEEeeCCCCCCCCCCCCCCEEEEEEec--CCCceEecCcCcCCCCC
Confidence 3456799999999986532 22222222 2222233 26788999988642 23478999999999999
Q ss_pred ccCceEEEE-eecC--CCCEEEEEEEECCCCCC-CeeEEEEEecccccccce-eeeEEEcCCC
Q 009664 452 IWNQTFDFV-VEDG--LHDMLIAEVWDHDTFGK-DYMGRCILTLTRVILEGE-YTDCFELDGT 509 (529)
Q Consensus 452 ~wne~f~f~-v~~~--~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~~~~-~~~w~~L~~~ 509 (529)
+|||.|+|. ++.. ....|.|+|||++.+++ ++||++.++|+++..... ..-|++|...
T Consensus 72 ~wne~f~f~~v~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 72 AFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp EEEEEEEEECCCSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred cEeeEEEEcCcCHHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 999999995 6532 45799999999998876 899999999999977544 4667999864
No 75
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.46 E-value=1.4e-13 Score=122.86 Aligned_cols=109 Identities=17% Similarity=0.296 Sum_probs=81.8
Q ss_pred CccccEEEEEEEEEEcccCCCCCCCCCCCCcchhhh--hhhhcCCcccCCCceEEEEEEEccCCeeEeeecccCCCCCcc
Q 009664 376 TKYRGQVHLELLYCPFGMENVFTNPFAPNFSMTSLE--KVLTNGEKALKSGANGTEAIELEKDASQKRREVVNDCLNPIW 453 (529)
Q Consensus 376 ~~~~G~i~l~l~~~p~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~w 453 (529)
...+|+|++++.|.+.. ..+.+..++ .+...+..+.++||+++++........++||+++++|.||+|
T Consensus 20 ~~~~G~l~~~l~y~~~~----------~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~w 89 (166)
T 2cm5_A 20 IEERGKILVSLMYSTQQ----------GGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEF 89 (166)
T ss_dssp CCCCCEEEEEEEEETTT----------TEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEE
T ss_pred cCccceEEEEEEEECCC----------CEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcc
Confidence 45779999999998643 222222222 222334456789999998754333356899999999999999
Q ss_pred CceEEEEeecC--CCCEEEEEEEECCCCCC-CeeEEEEEecccc
Q 009664 454 NQTFDFVVEDG--LHDMLIAEVWDHDTFGK-DYMGRCILTLTRV 494 (529)
Q Consensus 454 ne~f~f~v~~~--~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l 494 (529)
||.|.|.+... ....|.|+|||++.+++ ++||++.++|+++
T Consensus 90 ne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 90 NEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAK 133 (166)
T ss_dssp EEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCC
T ss_pred cceEEEEcchHhcCCCEEEEEEEECCCCCCCcEEEeEEEecccC
Confidence 99999999643 36799999999999876 8999999999985
No 76
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.45 E-value=5.5e-15 Score=154.30 Aligned_cols=127 Identities=17% Similarity=0.279 Sum_probs=23.8
Q ss_pred cCcceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCCeEeccccCCC---CCCeeccEEEEEEecCCCCEEEEEEEE
Q 009664 258 LKPVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEKTKKSKTINND---LNPIWNEHFEFIVEDESTQHLVVRIYD 334 (529)
Q Consensus 258 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t---~nP~Wne~f~~~v~~~~~~~l~i~v~d 334 (529)
.+..|.|+|+|++|++|+++| ||||+++++ +....||+++++| +||+|||+|.|.+... .+.|.++|||
T Consensus 7 ~r~~~~L~V~VieAk~L~~~d-----dpYv~v~l~--~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d 78 (483)
T 3bxj_A 7 RRVDNVLKLWIIEARELPPKK-----RYYCELCLD--DMLYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYR 78 (483)
T ss_dssp EEEEECC----------------------------------------------------CCEECC---------------
T ss_pred ceeccEEEEEEEEcCCcCCCC-----CCeEEEEEC--CeEEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEe
Confidence 356799999999999999876 999999997 2346789999999 9999999999986543 4689999999
Q ss_pred C-C---CCCCCceeEEEEEECcccCCCceeeEEEEccccccc-------------------ccCCccccEEEEEEEEEEc
Q 009664 335 D-E---GIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDV-------------------QRDTKYRGQVHLELLYCPF 391 (529)
Q Consensus 335 ~-~---~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~-------------------~~~~~~~G~i~l~l~~~p~ 391 (529)
+ | ..++|++||++.+++.++..+...+.|++|...... .+.....|.|++++.|.+.
T Consensus 79 ~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~ 158 (483)
T 3bxj_A 79 DSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTM 158 (483)
T ss_dssp ----------------------------CCEECC--------------------------------------CEEEEEEC
T ss_pred cCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeee
Confidence 4 4 367899999999999999888888999999542210 0112346999999999865
Q ss_pred c
Q 009664 392 G 392 (529)
Q Consensus 392 ~ 392 (529)
.
T Consensus 159 ~ 159 (483)
T 3bxj_A 159 S 159 (483)
T ss_dssp C
T ss_pred e
Confidence 3
No 77
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.45 E-value=1.5e-13 Score=117.81 Aligned_cols=99 Identities=18% Similarity=0.287 Sum_probs=80.0
Q ss_pred CcccCCCceEEEEEEEccCCeeEeeecccCCCCCccCceEEEEeecCCCCEEEEEEEECCCCC----CCeeEEEEEeccc
Q 009664 418 EKALKSGANGTEAIELEKDASQKRREVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFG----KDYMGRCILTLTR 493 (529)
Q Consensus 418 ~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~i~V~D~~~~~----~d~lG~~~i~L~~ 493 (529)
..+.++||+++++ ....+++||+++++|.||+|||.|.|.+.+. +.|.|+|||++..+ +++||++.+++++
T Consensus 22 ~~g~sDpyv~v~~---~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~~~~~d~~lG~~~i~l~~ 96 (132)
T 3pyc_A 22 FFRLPDPFAKIVV---DGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIHKKQGAGFLGCVRLLSNA 96 (132)
T ss_dssp TTCCCCEEEEEEE---TTTCCEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTTSSTTTTEEEEEEECHHH
T ss_pred CCCCcCeEEEEEE---CCCCceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCCCCCCCCceEEEEEeHHH
Confidence 4457889998875 2224789999999999999999999999764 34999999999876 4899999999999
Q ss_pred cccc-ceeeeEEEcCCC-------CccEEEEEEEEE
Q 009664 494 VILE-GEYTDCFELDGT-------KSGKLKLHLKWM 521 (529)
Q Consensus 494 l~~~-~~~~~w~~L~~~-------~~G~i~l~~~~~ 521 (529)
+... ....+|++|... ..|+|++++.++
T Consensus 97 l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~r 132 (132)
T 3pyc_A 97 ISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQTR 132 (132)
T ss_dssp HHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEEC
T ss_pred hhcccccCcEEEeeeecCCCCCCceeEEEEEEEEcC
Confidence 8433 334689999753 379999999864
No 78
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.39 E-value=5.7e-13 Score=119.42 Aligned_cols=97 Identities=22% Similarity=0.343 Sum_probs=81.3
Q ss_pred cCCCceEEEEEEEccCCeeEeeecccCCCCCccCceEEEEeecCCCCEEEEEEEECCCCCC-CeeEEEEEecccccccc-
Q 009664 421 LKSGANGTEAIELEKDASQKRREVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFGK-DYMGRCILTLTRVILEG- 498 (529)
Q Consensus 421 ~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~~~- 498 (529)
.++||+++++ +.+++||+++++|.||+|||.|.|.+.. ...|.|+|||++.+++ ++||++.++|.++....
T Consensus 56 ~sDPYv~v~~-----~~~~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~~~dd~lG~~~i~l~~l~~~~~ 128 (173)
T 2nq3_A 56 GPSPYVEVTV-----DGQSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTLKSDVLLGTAALDIYETLKSNN 128 (173)
T ss_dssp CCCEEEEEEE-----TTEEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHHTT
T ss_pred CCCeEEEEEE-----CCEEeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCCCCCceEEEEEEEHHHhcccCC
Confidence 3779998875 3378999999999999999999999853 7899999999999876 79999999999987532
Q ss_pred -e---eeeEEEcCCC-----CccEEEEEEEEEeCC
Q 009664 499 -E---YTDCFELDGT-----KSGKLKLHLKWMPQP 524 (529)
Q Consensus 499 -~---~~~w~~L~~~-----~~G~i~l~~~~~~~~ 524 (529)
. ...|++|... ..|+|.+.+.+.++.
T Consensus 129 ~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~~ 163 (173)
T 2nq3_A 129 MKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQLE 163 (173)
T ss_dssp TEESSEEEEEEEEESSCTTSEEEEEEEEEESEECC
T ss_pred CCcceeEEEEECccCCCCCcccEEEEEEEeeeecc
Confidence 1 2679999753 479999999998763
No 79
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.29 E-value=4.3e-12 Score=138.51 Aligned_cols=109 Identities=35% Similarity=0.558 Sum_probs=94.7
Q ss_pred cceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCC--CCeEeccccCCCCCCeeccEEEEEEecC-CCCEEEEEEEECC
Q 009664 260 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--EKTKKSKTINNDLNPIWNEHFEFIVEDE-STQHLVVRIYDDE 336 (529)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~~~~kT~~~~~t~nP~Wne~f~~~v~~~-~~~~l~i~v~d~~ 336 (529)
..+.|.|++++|++|.++|..|.+|||+++++.+.+ ..+++|+++++++||.|||+|.|.+... ....|.++|||+|
T Consensus 170 ~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d 249 (674)
T 3pfq_A 170 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 249 (674)
T ss_dssp CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECC
T ss_pred ccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecc
Confidence 358899999999999999999999999999997543 3578999999999999999999998654 2457999999999
Q ss_pred CCCCCceeEEEEEECcccCCCceeeEEEEcccc
Q 009664 337 GIQSSELIGCAQVRLCELEPGKVKDVWLKLVKD 369 (529)
Q Consensus 337 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 369 (529)
..++|++||++.+++.++.... .+.|+.|...
T Consensus 250 ~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~ 281 (674)
T 3pfq_A 250 LTSRNDFMGSLSFGISELQKAG-VDGWFKLLSQ 281 (674)
T ss_dssp SSSCCEECCBCCCBTTHHHHCC-EEEEEECBCT
T ss_pred cccccccccccccchhhhccCC-cccceeeccc
Confidence 9999999999999999987654 4889998653
No 80
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.26 E-value=1.7e-11 Score=103.11 Aligned_cols=100 Identities=11% Similarity=0.122 Sum_probs=84.6
Q ss_pred ccCCCceEEEEEEEccCCeeEeeeccc-CCCCCccCceEEEEeecC--CCCEEEEEEEECCCCCC-CeeEEEEEeccccc
Q 009664 420 ALKSGANGTEAIELEKDASQKRREVVN-DCLNPIWNQTFDFVVEDG--LHDMLIAEVWDHDTFGK-DYMGRCILTLTRVI 495 (529)
Q Consensus 420 ~~~~~~l~v~~~~~~~~~~~~kT~v~~-~t~nP~wne~f~f~v~~~--~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~ 495 (529)
+.+++++++++ ...++||++++ .+.||+|||.|+|++..+ .++.|+|+|+|++++++ .+||++.++|.++.
T Consensus 35 g~~Dp~akv~F-----Rg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~nrlIG~~~i~Lq~lv 109 (144)
T 3l9b_A 35 GRADRIAKVTF-----RGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSNKLIGTFRMVLQKVV 109 (144)
T ss_dssp SCEEEEEEEEE-----TTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCCEEEEEEEEESHHHH
T ss_pred CCCCCeEEEEE-----eccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCCCEEEEEEEEhHHhc
Confidence 46779999886 56789999998 599999999999999644 67899999999999877 79999999999999
Q ss_pred ccceeeeEEEcCCC----CccEEEEEEEEEeCC
Q 009664 496 LEGEYTDCFELDGT----KSGKLKLHLKWMPQP 524 (529)
Q Consensus 496 ~~~~~~~w~~L~~~----~~G~i~l~~~~~~~~ 524 (529)
..+...-+-+|.+. -.+.|.+++.|.|-+
T Consensus 110 ~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 110 EENRVEVSDTLIDDNNAIIKTSLSMEVRYQAAD 142 (144)
T ss_dssp HHSEEEEEEEEECTTSCEEEEEEEEEEEEEETT
T ss_pred cCCeEEEeecccCCCCCccccEEEEEEEecCCC
Confidence 88887666777542 248999999999853
No 81
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.26 E-value=8.6e-12 Score=131.96 Aligned_cols=100 Identities=21% Similarity=0.395 Sum_probs=87.4
Q ss_pred CCcccCCCceEEEEEEEccCCeeEeeecccCCCCCccCceEEEEeecCCCCEEEEEEEECCCCCC-CeeEEEEEeccccc
Q 009664 417 GEKALKSGANGTEAIELEKDASQKRREVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFGK-DYMGRCILTLTRVI 495 (529)
Q Consensus 417 ~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~ 495 (529)
+..+.++||+.+++ +..+++|+++++|.||+|||.|.|.+.++....|.|+|||++.+++ ++||++.++|+++.
T Consensus 403 d~~~~sdpyv~v~~-----~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~d~lG~~~~~l~~l~ 477 (510)
T 3jzy_A 403 KPNGKSNPYCEISM-----GSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPDDFLGRTEIPVAKIR 477 (510)
T ss_dssp STTSCCCEEEEEEE-----TTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSCCEEEEEEEEHHHHH
T ss_pred CCCCCCCeEEEEEE-----CCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCCCceEEEEEEHHHhc
Confidence 34567889999885 5678999999999999999999999987777899999999999876 89999999999997
Q ss_pred ccce----eeeEEEcCCCCccEEEEEEEEE
Q 009664 496 LEGE----YTDCFELDGTKSGKLKLHLKWM 521 (529)
Q Consensus 496 ~~~~----~~~w~~L~~~~~G~i~l~~~~~ 521 (529)
.... ...|++|.+...|+|++++..+
T Consensus 478 ~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 478 TEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp HHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred cccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 6543 6899999999999999988764
No 82
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.18 E-value=5.8e-11 Score=101.17 Aligned_cols=79 Identities=18% Similarity=0.284 Sum_probs=59.8
Q ss_pred cccCCCceEEEEEEEccCCeeEeeeccc-CCCCCccCceEEEEeecCCCCEEEEEEEECCCCCC-CeeEEEEEecccccc
Q 009664 419 KALKSGANGTEAIELEKDASQKRREVVN-DCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFGK-DYMGRCILTLTRVIL 496 (529)
Q Consensus 419 ~~~~~~~l~v~~~~~~~~~~~~kT~v~~-~t~nP~wne~f~f~v~~~~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~ 496 (529)
.+.++||+++. . +..||++++ ++.||+|||.|.|.+.+ ....|.|+|||++ .++ ++||++.|+|+++..
T Consensus 20 ~g~~DPYv~v~---~----~~~kt~~~~~~t~nP~WnE~f~f~v~~-~~~~L~~~V~D~d-~~~dd~iG~~~i~l~~l~~ 90 (131)
T 2cjt_A 20 QEKFNTYVTLK---V----QNVKSTTIAVRGSQPSWEQDFMFEINR-LDLGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQ 90 (131)
T ss_dssp GGGCEEEEEEE---E----TTEEEECCCEESSSCEEEEEEEEEECC-CSSEEEEEEEECC-SSCEEEEEEEEEEGGGSCB
T ss_pred CCCcCeEEEEE---e----cCEEEeEecCCCCCceECCEEEEEEeC-CCCeEEEEEEECC-CCCCCeEEEEEEEHHHhhh
Confidence 35677999887 1 234565555 69999999999999986 4557999999999 665 899999999999876
Q ss_pred cce--eeeEEEc
Q 009664 497 EGE--YTDCFEL 506 (529)
Q Consensus 497 ~~~--~~~w~~L 506 (529)
... ..+|+++
T Consensus 91 ~~~~~~~~~~~~ 102 (131)
T 2cjt_A 91 SNEEGPGEWLTL 102 (131)
T ss_dssp CSSCCCCEEEEC
T ss_pred cCCCCccccEEc
Confidence 542 1245544
No 83
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.16 E-value=1.8e-10 Score=126.26 Aligned_cols=116 Identities=17% Similarity=0.357 Sum_probs=90.3
Q ss_pred eEEEEEEEEecCCCccCCCCCCCcEEEEEEecCC--C-CeEeccccCC-CCCCeecc-EEEEE-EecCCCCEEEEEEEEC
Q 009664 262 GTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--E-KTKKSKTINN-DLNPIWNE-HFEFI-VEDESTQHLVVRIYDD 335 (529)
Q Consensus 262 g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~-~~~kT~~~~~-t~nP~Wne-~f~~~-v~~~~~~~l~i~v~d~ 335 (529)
..|+|+|++|++|+.. .+||||++.+.+.+ . ++++|+++++ +.||+||| +|.|. +..+....|+|+|||+
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~ 800 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEE 800 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcC
Confidence 4899999999999853 68999999997321 1 3578999875 69999999 69998 7655556899999998
Q ss_pred CCCCCCceeEEEEEECcccCCCceeeEEEEcccccccccCCccccEEEEEEEEEEc
Q 009664 336 EGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYCPF 391 (529)
Q Consensus 336 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~p~ 391 (529)
| +++||++.+||..|..|. .+++|.... ...-..|.|.+.+.+...
T Consensus 801 d----ddfiG~~~lpL~~L~~Gy---R~vpL~~~~---g~~l~~atLfv~i~~~~~ 846 (885)
T 3ohm_B 801 G----GKFVGHRILPVSAIRSGY---HYVCLRNEA---NQPLCLPALLIYTEASDY 846 (885)
T ss_dssp T----TEEEEEEEEETTTCCCEE---EEEEEECTT---SCEEEEEEEEEEEEEEEC
T ss_pred C----ccEEeeEEEEHHHcCCCc---eEEEecCCC---CCccCceEEEEEEEEEec
Confidence 7 799999999999998763 356775321 112246899999988753
No 84
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.15 E-value=2.5e-10 Score=125.23 Aligned_cols=116 Identities=19% Similarity=0.298 Sum_probs=88.5
Q ss_pred cceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCC---CCeEecc-ccC-CCCCCeecc-EEEE-EEecCCCCEEEEEE
Q 009664 260 PVGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP---EKTKKSK-TIN-NDLNPIWNE-HFEF-IVEDESTQHLVVRI 332 (529)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~~~~kT~-~~~-~t~nP~Wne-~f~~-~v~~~~~~~l~i~v 332 (529)
..|.|.|+|++|++|+. +.+||||++.+.+.+ .+++||+ +++ ++.||+||| +|.| .+..+....|+|.|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 36899999999999984 468999999996321 2367899 775 569999999 6999 78666556899999
Q ss_pred EECCCCCCCceeEEEEEECcccCCCceeeEEEEcccccccccCCccccEEEEEEEEE
Q 009664 333 YDDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYC 389 (529)
Q Consensus 333 ~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~ 389 (529)
||++ +++||++.++|..|..| ..|++|.... ...-..+.|.+.+.+.
T Consensus 752 ~D~d----~d~iG~~~ipl~~L~~G---~r~v~L~~~~---g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 752 MEEG----NKFLGHRIIPINALNSG---YHHLCLHSES---NMPLTMPALFIFLEMK 798 (799)
T ss_dssp EETT----TEEEEEEEEEGGGBCCE---EEEEEEECTT---CCEEEEEEEEEEEEEE
T ss_pred EEeC----CCccceEeeehhhcCCC---cEEEeccCCC---CCCCCceEEEEEEEEE
Confidence 9986 79999999999999875 3567775321 1112347777777653
No 85
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.15 E-value=2.8e-10 Score=124.15 Aligned_cols=117 Identities=23% Similarity=0.374 Sum_probs=90.4
Q ss_pred ceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCC--C--CeEeccccCC-CCCCeeccE-EEEE-EecCCCCEEEEEEE
Q 009664 261 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP--E--KTKKSKTINN-DLNPIWNEH-FEFI-VEDESTQHLVVRIY 333 (529)
Q Consensus 261 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~--~--~~~kT~~~~~-t~nP~Wne~-f~~~-v~~~~~~~l~i~v~ 333 (529)
.+.|+|+|++|++|+.+ .+||||++.+.+.+ . ++++|+++++ +.||+|||+ |.|. +..+....|+|.||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 47899999999999853 68999999997321 2 4679999875 699999998 9998 76665568999999
Q ss_pred ECCCCCCCceeEEEEEECcccCCCceeeEEEEcccccccccCCccccEEEEEEEEEEc
Q 009664 334 DDEGIQSSELIGCAQVRLCELEPGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYCPF 391 (529)
Q Consensus 334 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~p~ 391 (529)
|++ +++||++.++|+.|..|- .+++|.... ...-..+.|.+.+.+.-.
T Consensus 725 D~d----ddfiG~~~ipL~~L~~Gy---R~vpL~~~~---g~~~~~atLfv~i~~~~~ 772 (816)
T 3qr0_A 725 EEN----GKFIGHRVMPLDGIKPGY---RHVPLRNES---NRPLGLASVFAHIVAKDY 772 (816)
T ss_dssp ETT----SCEEEEEEEESTTCCCEE---EEEEEECTT---SCEEEEEEEEEEEEEEEC
T ss_pred ecC----CCeeeEEEEEHHHcCCcc---eEEEEeCCC---CCCCCceEEEEEEEEEec
Confidence 985 789999999999998763 457775421 112234788888877643
No 86
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.09 E-value=4.8e-10 Score=117.39 Aligned_cols=93 Identities=23% Similarity=0.238 Sum_probs=77.8
Q ss_pred CCcccCCCceEEEEEEEccCCeeEeeecccCCCCCccCceEEEEeec-CCCCEEEEEEEECCCCCC-CeeEEEEEecccc
Q 009664 417 GEKALKSGANGTEAIELEKDASQKRREVVNDCLNPIWNQTFDFVVED-GLHDMLIAEVWDHDTFGK-DYMGRCILTLTRV 494 (529)
Q Consensus 417 ~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l 494 (529)
+..+.+|||+++++ +.+++||+++++++||+|||.|.|.+.+ .....|.|+|||+|..++ |+||++.++|..
T Consensus 409 D~~g~sDPYV~v~l-----~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~dD~LG~~~~~L~~- 482 (540)
T 3nsj_A 409 DYTTATDAYLKVFF-----GGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRSPHS- 482 (540)
T ss_dssp SSCSCCCEEEEEEE-----TTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCCEEEEEEEECCCS-
T ss_pred ccCCCcCeEEEEEE-----CCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCCCEEEEEEEEeeC-
Confidence 44567889999885 3457999999999999999999998653 467789999999999876 899999999983
Q ss_pred cccceeeeEEEcCCCCccEEEEEEEEE
Q 009664 495 ILEGEYTDCFELDGTKSGKLKLHLKWM 521 (529)
Q Consensus 495 ~~~~~~~~w~~L~~~~~G~i~l~~~~~ 521 (529)
+....|++|+. |.|+++++.+
T Consensus 483 ---g~~~~~~~l~~---G~l~~~~~~~ 503 (540)
T 3nsj_A 483 ---GFHEVTCELNH---GRVKFSYHAK 503 (540)
T ss_dssp ---EEEEEEEECSS---SEEEEEEEEE
T ss_pred ---CcEEEEEEcCC---eEEEEEEEEE
Confidence 45678999874 8999888765
No 87
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.07 E-value=3.8e-10 Score=100.17 Aligned_cols=71 Identities=15% Similarity=0.233 Sum_probs=57.0
Q ss_pred cccCCCceEEEEEEEccCCeeEeeeccc-CCCCCccCceEEEEeecCCCCEEEEEEEECCCCCC-CeeEEEEEecccccc
Q 009664 419 KALKSGANGTEAIELEKDASQKRREVVN-DCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFGK-DYMGRCILTLTRVIL 496 (529)
Q Consensus 419 ~~~~~~~l~v~~~~~~~~~~~~kT~v~~-~t~nP~wne~f~f~v~~~~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~ 496 (529)
.+.++||+++. . +.+||++++ ++.||+|||.|.|.+.+. ...|.|+|||++ +++ ++||++.|+|+++..
T Consensus 29 ~g~~DPYV~v~---~----~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~~dd~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 29 QEKFNTYVTLK---V----QNVESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQ 99 (167)
T ss_dssp GGGCEEEEEEE---E----TTEEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC-SSCCEEEEEEEEEGGGSCB
T ss_pred CCCCCeEEEEE---e----cceEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC-CCCCceEEEEEEEHHHhcc
Confidence 35677999887 1 235676665 699999999999999864 457999999999 654 899999999999876
Q ss_pred cc
Q 009664 497 EG 498 (529)
Q Consensus 497 ~~ 498 (529)
..
T Consensus 100 ~~ 101 (167)
T 2cjs_A 100 SN 101 (167)
T ss_dssp CS
T ss_pred cC
Confidence 54
No 88
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.06 E-value=3e-09 Score=86.70 Aligned_cols=113 Identities=12% Similarity=0.215 Sum_probs=84.0
Q ss_pred ceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCC-CCeEec-cccCCCCCCeeccEEEEEEecCCCCEEEEEEEECCCC
Q 009664 261 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLP-EKTKKS-KTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDEGI 338 (529)
Q Consensus 261 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~-~~~~kT-~~~~~t~nP~Wne~f~~~v~~~~~~~l~i~v~d~~~~ 338 (529)
.+.|||...++.--+-+......||||.+.+.... ....+| ..+++|..|+|||+|.-.+.+ .+.|.+.|++...
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~- 81 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE- 81 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT-
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC-
Confidence 46788888666532212223468999999986211 112244 667889999999999988876 4689999997543
Q ss_pred CCCceeEEEEEECcccC-----CCceeeEEEEcccccccccCCccccEEEEEEEEE
Q 009664 339 QSSELIGCAQVRLCELE-----PGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYC 389 (529)
Q Consensus 339 ~~d~~lG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~ 389 (529)
++++.|++++.+|. .+...+.|+.|. +.|+|++.+.|+
T Consensus 82 ---~fvAn~tV~~edL~~~c~~~~g~~e~WvdLe----------P~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 ---EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQ----------PQAKVLMSVQYF 124 (126)
T ss_dssp ---EEEEEEEEEHHHHHHHHHTTTTEEEEEEECB----------SSCEEEEEEEEE
T ss_pred ---CeeeEEEEEHHHHHhhhccCCCceEEEEecc----------cCcEEEEEEEEe
Confidence 89999999999986 456779999984 479999999986
No 89
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=98.98 E-value=1.3e-09 Score=116.60 Aligned_cols=100 Identities=18% Similarity=0.263 Sum_probs=80.8
Q ss_pred cccCCCceEEEEEEEccCCeeEeeecccCC-CCCccCceEEEEeecCCCCEEEEEEEECCCCCC-CeeEEEEEecccccc
Q 009664 419 KALKSGANGTEAIELEKDASQKRREVVNDC-LNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFGK-DYMGRCILTLTRVIL 496 (529)
Q Consensus 419 ~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~ 496 (529)
.+.++||++|.+........++||++++++ .||+|||.|+|.+..+....|.|+|||++..++ ++||++.++|+++..
T Consensus 517 ~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~ 596 (624)
T 1djx_A 517 NSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQ 596 (624)
T ss_dssp SSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCC
T ss_pred cCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCC
Confidence 467889999987544344568899999997 999999999999987766899999999998865 899999999999854
Q ss_pred cceeeeEEEcCCC-----CccEEEEEEEEE
Q 009664 497 EGEYTDCFELDGT-----KSGKLKLHLKWM 521 (529)
Q Consensus 497 ~~~~~~w~~L~~~-----~~G~i~l~~~~~ 521 (529)
. .+|++|.+. ..+.|.+.+.++
T Consensus 597 G---~r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 597 G---YRHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp E---EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred C---cEEEeCCCCCcCCCCceEEEEEEEEE
Confidence 3 468999653 246677777664
No 90
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=98.97 E-value=4.2e-10 Score=121.49 Aligned_cols=94 Identities=18% Similarity=0.302 Sum_probs=78.6
Q ss_pred cccCCCceEEEEEEEccCCeeEeeecccCCCCCccCceEEEEeecCCCCEEEEEEEECCCCCCCeeEEEEEecccccccc
Q 009664 419 KALKSGANGTEAIELEKDASQKRREVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFGKDYMGRCILTLTRVILEG 498 (529)
Q Consensus 419 ~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~L~i~V~D~~~~~~d~lG~~~i~L~~l~~~~ 498 (529)
.+.++||+++++.. ....++||++++++.||+|||.|+|.+.+.....|.|+|||++.+++++||++.++|.++....
T Consensus 39 ~g~sDPYV~V~l~~--~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D~~~ddfIG~v~I~L~~L~~g~ 116 (749)
T 1cjy_A 39 LDTPDPYVELFIST--TPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYVMDETLGTATFTVSSMKVGE 116 (749)
T ss_dssp HCCCCEEEEEECTT--STTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEECCSSSCEEEEEECCBSTTSCTTC
T ss_pred CCCcCeEEEEEEec--CCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEECCCCCCceeEEEEEEHHHcCCCC
Confidence 35678999887521 1246789999999999999999999998777789999999999988779999999999997777
Q ss_pred eeeeEEEcCCCCccEEEE
Q 009664 499 EYTDCFELDGTKSGKLKL 516 (529)
Q Consensus 499 ~~~~w~~L~~~~~G~i~l 516 (529)
...+|++|.+. +++.+
T Consensus 117 ~~~~w~~L~~~--~e~~l 132 (749)
T 1cjy_A 117 KKEVPFIFNQV--TEMVL 132 (749)
T ss_dssp CCCEEEEETTT--EEEEE
T ss_pred ceEEEEecCCC--ceEee
Confidence 77999999975 44444
No 91
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.94 E-value=4.4e-09 Score=86.80 Aligned_cols=114 Identities=16% Similarity=0.295 Sum_probs=84.5
Q ss_pred cceEEEEEEEEecCCCccC-CCCCCCcEEEEEEecCC-CCeEec-cccCCCCCCeeccEEEEEEecCCCCEEEEEEEECC
Q 009664 260 PVGTLEVKLVQAKGLTNKD-LIGKSDPYAVLFVRPLP-EKTKKS-KTINNDLNPIWNEHFEFIVEDESTQHLVVRIYDDE 336 (529)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d-~~g~~dpyv~v~~~~~~-~~~~kT-~~~~~t~nP~Wne~f~~~v~~~~~~~l~i~v~d~~ 336 (529)
..+.|||...++.--+-+. .....||||.+.+...- ....+| ..+++|..|+|||+|.-.+.+ .+.|.|.|++..
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a 85 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKN 85 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSS
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCC
Confidence 3467888887766433221 12358999999987210 012455 555779999999999888866 468999999644
Q ss_pred CCCCCceeEEEEEECcccC-----CCceeeEEEEcccccccccCCccccEEEEEEEEE
Q 009664 337 GIQSSELIGCAQVRLCELE-----PGKVKDVWLKLVKDLDVQRDTKYRGQVHLELLYC 389 (529)
Q Consensus 337 ~~~~d~~lG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~~~~~~~~G~i~l~l~~~ 389 (529)
. +++..|++++.+|. .+...+.|+.|. +.|+|++.+.|+
T Consensus 86 ~----~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe----------P~Gkl~v~i~~~ 129 (138)
T 2enj_A 86 V----DLISETTVELYSLAERCRKNNGKTEIWLELK----------PQGRMLMNARYF 129 (138)
T ss_dssp C----SCCEEEEEESHHHHHHHHHTTTCEEEEEECB----------SSCEEEEEEEEC
T ss_pred C----CeeeEEEEEHHHHHhhhccCCCceEEEEecc----------cCcEEEEEEEEE
Confidence 3 89999999999996 456679999984 579999999996
No 92
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=98.93 E-value=1.2e-10 Score=121.48 Aligned_cols=97 Identities=10% Similarity=0.111 Sum_probs=18.5
Q ss_pred CCceEEEEEEEccCCeeEeeecccCC---CCCccCceEEEEeecCCCCEEEEEEEEC-C---CCC-CCeeEEEEEecccc
Q 009664 423 SGANGTEAIELEKDASQKRREVVNDC---LNPIWNQTFDFVVEDGLHDMLIAEVWDH-D---TFG-KDYMGRCILTLTRV 494 (529)
Q Consensus 423 ~~~l~v~~~~~~~~~~~~kT~v~~~t---~nP~wne~f~f~v~~~~~~~L~i~V~D~-~---~~~-~d~lG~~~i~L~~l 494 (529)
++|+++++ .+..+.||+++++| .||+|||.|+|.+... ...|.|+|||+ + ..+ +++||++.|+++++
T Consensus 28 dpYv~v~l----~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~~d~~~~~~~d~~lG~v~i~l~~l 102 (483)
T 3bxj_A 28 RYYCELCL----DDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATL 102 (483)
T ss_dssp -----------------------------------CCEECC---------------------------------------
T ss_pred CCeEEEEE----CCeEEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEecCCccccCCCCceEEEEEEEHHHh
Confidence 68888775 23345699999999 9999999999986433 47899999994 4 234 48999999999999
Q ss_pred cccceeeeEEEcCCC---------------------------CccEEEEEEEEEeCC
Q 009664 495 ILEGEYTDCFELDGT---------------------------KSGKLKLHLKWMPQP 524 (529)
Q Consensus 495 ~~~~~~~~w~~L~~~---------------------------~~G~i~l~~~~~~~~ 524 (529)
......++||+|.+. ..|.|+|++.|++..
T Consensus 103 ~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~~ 159 (483)
T 3bxj_A 103 AGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTMS 159 (483)
T ss_dssp ----CCEECC--------------------------------------CEEEEEECC
T ss_pred cCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeeee
Confidence 877677999999531 248999999998753
No 93
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.88 E-value=1.4e-09 Score=118.69 Aligned_cols=95 Identities=24% Similarity=0.447 Sum_probs=79.9
Q ss_pred cCCcccCCCceEEEEEEEccCCeeEeeecccCCCCCccCceEEEEeecC-CCCEEEEEEEECCCCCC-CeeEEEEEeccc
Q 009664 416 NGEKALKSGANGTEAIELEKDASQKRREVVNDCLNPIWNQTFDFVVEDG-LHDMLIAEVWDHDTFGK-DYMGRCILTLTR 493 (529)
Q Consensus 416 ~~~~~~~~~~l~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~ 493 (529)
.+..+.++||+++.+........++||+++++|.||.|||.|.|.+... ....|.++|||++..+. ++||++.+++++
T Consensus 187 ~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~ 266 (674)
T 3pfq_A 187 MDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISE 266 (674)
T ss_dssp CSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCSSSCCEECCBCCCBTTH
T ss_pred CCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecccccccccccccccchhh
Confidence 4556788999999987666667789999999999999999999998754 45679999999999876 899999999999
Q ss_pred ccccceeeeEEEcCCCCc
Q 009664 494 VILEGEYTDCFELDGTKS 511 (529)
Q Consensus 494 l~~~~~~~~w~~L~~~~~ 511 (529)
+...+ ..+||.|.+...
T Consensus 267 l~~~~-~~~w~~Lls~~~ 283 (674)
T 3pfq_A 267 LQKAG-VDGWFKLLSQEE 283 (674)
T ss_dssp HHHCC-EEEEEECBCTTG
T ss_pred hccCC-cccceeeccccc
Confidence 97654 489999976433
No 94
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.68 E-value=1.8e-07 Score=76.25 Aligned_cols=93 Identities=10% Similarity=0.171 Sum_probs=73.0
Q ss_pred cCCCceEEEEEEEccCCeeEee-ecccCCCCCccCceEEEEeecCCCCEEEEEEEECCCCCCCeeEEEEEeccccccc--
Q 009664 421 LKSGANGTEAIELEKDASQKRR-EVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFGKDYMGRCILTLTRVILE-- 497 (529)
Q Consensus 421 ~~~~~l~v~~~~~~~~~~~~kT-~v~~~t~nP~wne~f~f~v~~~~~~~L~i~V~D~~~~~~d~lG~~~i~L~~l~~~-- 497 (529)
..+||+.|.+-....+. .-+| ..+++|..|.||++|.-.+.+ ...|+|.|+.... +++..+++++.+|..+
T Consensus 26 ~lDPy~aV~vdE~~~~e-~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~---~fvAn~tV~~edL~~~c~ 99 (126)
T 1yrk_A 26 ANQPFCAVKMKEALSTE-RGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE---EPVSEVTVGVSVLAERCK 99 (126)
T ss_dssp SCCCEEEEEEEEEEEET-TEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT---EEEEEEEEEHHHHHHHHH
T ss_pred cCCceEEEEeeeeEEcc-cceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC---CeeeEEEEEHHHHHhhhc
Confidence 45699988754333222 2344 677889999999999999885 4689999996554 8999999999999843
Q ss_pred ---ceeeeEEEcCCCCccEEEEEEEEE
Q 009664 498 ---GEYTDCFELDGTKSGKLKLHLKWM 521 (529)
Q Consensus 498 ---~~~~~w~~L~~~~~G~i~l~~~~~ 521 (529)
+..+-|++|+. .|+|++.++|.
T Consensus 100 ~~~g~~e~WvdLeP--~Gkl~~~i~~~ 124 (126)
T 1yrk_A 100 KNNGKAEFWLDLQP--QAKVLMSVQYF 124 (126)
T ss_dssp TTTTEEEEEEECBS--SCEEEEEEEEE
T ss_pred cCCCceEEEEeccc--CcEEEEEEEEe
Confidence 45689999998 69999999875
No 95
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.53 E-value=4.3e-07 Score=75.00 Aligned_cols=94 Identities=14% Similarity=0.214 Sum_probs=72.1
Q ss_pred cCCCceEEEEEEEccCCeeEee-ecccCCCCCccCceEEEEeecCCCCEEEEEEEECCCCCCCeeEEEEEeccccccc--
Q 009664 421 LKSGANGTEAIELEKDASQKRR-EVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFGKDYMGRCILTLTRVILE-- 497 (529)
Q Consensus 421 ~~~~~l~v~~~~~~~~~~~~kT-~v~~~t~nP~wne~f~f~v~~~~~~~L~i~V~D~~~~~~d~lG~~~i~L~~l~~~-- 497 (529)
..+||+.|.+-...... .-+| ..+++|..|.||+.|.-.+.+ ...|+|.|++... +++..+++++.+|..+
T Consensus 31 ~lDPY~aV~VdE~~~te-~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~---~fVAn~tV~~edL~~~ck 104 (138)
T 2enj_A 31 AVNPYCAVLVKEYVESE-NGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKNV---DLISETTVELYSLAERCR 104 (138)
T ss_dssp CCCCEEEEEEEEEEEET-TEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSSC---SCCEEEEEESHHHHHHHH
T ss_pred cCCceEEEEeeeeeecc-CceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCCC---CeeeEEEEEHHHHHhhhc
Confidence 45699988753332111 2345 556679999999999988875 5689999995443 8999999999999843
Q ss_pred ---ceeeeEEEcCCCCccEEEEEEEEEe
Q 009664 498 ---GEYTDCFELDGTKSGKLKLHLKWMP 522 (529)
Q Consensus 498 ---~~~~~w~~L~~~~~G~i~l~~~~~~ 522 (529)
+..+-|++|+. .|+|++.++|.-
T Consensus 105 ~~~g~~e~WvdLeP--~Gkl~v~i~~~~ 130 (138)
T 2enj_A 105 KNNGKTEIWLELKP--QGRMLMNARYFL 130 (138)
T ss_dssp HTTTCEEEEEECBS--SCEEEEEEEECC
T ss_pred cCCCceEEEEeccc--CcEEEEEEEEEE
Confidence 45689999998 699999999964
No 96
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.48 E-value=2.8e-07 Score=101.16 Aligned_cols=96 Identities=17% Similarity=0.207 Sum_probs=72.7
Q ss_pred cCCCceEEEEEEEccCC-eeEeeecccC-CCCCccCc-eEEEE-eecCCCCEEEEEEEECCCCCCCeeEEEEEecccccc
Q 009664 421 LKSGANGTEAIELEKDA-SQKRREVVND-CLNPIWNQ-TFDFV-VEDGLHDMLIAEVWDHDTFGKDYMGRCILTLTRVIL 496 (529)
Q Consensus 421 ~~~~~l~v~~~~~~~~~-~~~kT~v~~~-t~nP~wne-~f~f~-v~~~~~~~L~i~V~D~~~~~~d~lG~~~i~L~~l~~ 496 (529)
..+||++|.+....... .++||+++++ +.||+||| .|+|. |..+....|.|+|||++ +++||++.++|+.|..
T Consensus 741 ~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d---ddfiG~~~lpL~~L~~ 817 (885)
T 3ohm_B 741 KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG---GKFVGHRILPVSAIRS 817 (885)
T ss_dssp CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT---TEEEEEEEEETTTCCC
T ss_pred CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC---ccEEeeEEEEHHHcCC
Confidence 46788888864322222 3579999986 59999999 69998 77666778999999997 5899999999999854
Q ss_pred cceeeeEEEcCCC-----CccEEEEEEEEEe
Q 009664 497 EGEYTDCFELDGT-----KSGKLKLHLKWMP 522 (529)
Q Consensus 497 ~~~~~~w~~L~~~-----~~G~i~l~~~~~~ 522 (529)
. .++++|.+. ..|.|.+.+..+.
T Consensus 818 G---yR~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 818 G---YHYVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp E---EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred C---ceEEEecCCCCCccCceEEEEEEEEEe
Confidence 3 456777643 2467888887774
No 97
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.47 E-value=4.2e-07 Score=99.72 Aligned_cols=95 Identities=17% Similarity=0.233 Sum_probs=70.8
Q ss_pred cCCCceEEEEEEEccC-CeeEeee-cccC-CCCCccCc-eEEE-EeecCCCCEEEEEEEECCCCCCCeeEEEEEeccccc
Q 009664 421 LKSGANGTEAIELEKD-ASQKRRE-VVND-CLNPIWNQ-TFDF-VVEDGLHDMLIAEVWDHDTFGKDYMGRCILTLTRVI 495 (529)
Q Consensus 421 ~~~~~l~v~~~~~~~~-~~~~kT~-v~~~-t~nP~wne-~f~f-~v~~~~~~~L~i~V~D~~~~~~d~lG~~~i~L~~l~ 495 (529)
..+||++|.+...... .+++||+ ++++ +.||+||| .|+| .+..+..+.|.|+|||++ +++||++.++|+.+.
T Consensus 694 ~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~d---~d~iG~~~ipl~~L~ 770 (799)
T 2zkm_X 694 SVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG---NKFLGHRIIPINALN 770 (799)
T ss_dssp CCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT---TEEEEEEEEEGGGBC
T ss_pred CCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEEEeC---CCccceEeeehhhcC
Confidence 5679999987543222 2367999 8775 69999999 6999 887666679999999997 589999999999985
Q ss_pred ccceeeeEEEcCCCC-----ccEEEEEEEEE
Q 009664 496 LEGEYTDCFELDGTK-----SGKLKLHLKWM 521 (529)
Q Consensus 496 ~~~~~~~w~~L~~~~-----~G~i~l~~~~~ 521 (529)
.. .+|++|.+.. .+.+.+.+.++
T Consensus 771 ~G---~r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 771 SG---YHHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp CE---EEEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred CC---cEEEeccCCCCCCCCceEEEEEEEEE
Confidence 43 4677886532 35555666553
No 98
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.44 E-value=5.6e-07 Score=98.26 Aligned_cols=95 Identities=14% Similarity=0.185 Sum_probs=72.6
Q ss_pred cCCCceEEEEEEEccCC--eeEeeecccC-CCCCccCce-EEEE-eecCCCCEEEEEEEECCCCCCCeeEEEEEeccccc
Q 009664 421 LKSGANGTEAIELEKDA--SQKRREVVND-CLNPIWNQT-FDFV-VEDGLHDMLIAEVWDHDTFGKDYMGRCILTLTRVI 495 (529)
Q Consensus 421 ~~~~~l~v~~~~~~~~~--~~~kT~v~~~-t~nP~wne~-f~f~-v~~~~~~~L~i~V~D~~~~~~d~lG~~~i~L~~l~ 495 (529)
..+||++|.+....... +++||+++++ +.||+|||. |+|. |..+..+.|.|+|||++ +++||++.++|+.+.
T Consensus 666 ~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~d---ddfiG~~~ipL~~L~ 742 (816)
T 3qr0_A 666 QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN---GKFIGHRVMPLDGIK 742 (816)
T ss_dssp CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEETT---SCEEEEEEEESTTCC
T ss_pred CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEecC---CCeeeEEEEEHHHcC
Confidence 46799999875432222 5789999886 599999998 9998 87666689999999985 589999999999986
Q ss_pred ccceeeeEEEcCCCC-----ccEEEEEEEEE
Q 009664 496 LEGEYTDCFELDGTK-----SGKLKLHLKWM 521 (529)
Q Consensus 496 ~~~~~~~w~~L~~~~-----~G~i~l~~~~~ 521 (529)
.. .++++|.+.. .+.|.+.+..+
T Consensus 743 ~G---yR~vpL~~~~g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 743 PG---YRHVPLRNESNRPLGLASVFAHIVAK 770 (816)
T ss_dssp CE---EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred Cc---ceEEEEeCCCCCCCCceEEEEEEEEE
Confidence 53 4567776532 35666666655
No 99
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=92.56 E-value=2.4 Score=38.18 Aligned_cols=54 Identities=22% Similarity=0.260 Sum_probs=39.4
Q ss_pred eEeccccCCCCCCeeccEEEEEEecC--CCCEEEEEEEECCCCC----CCceeEEEEEEC
Q 009664 298 TKKSKTINNDLNPIWNEHFEFIVEDE--STQHLVVRIYDDEGIQ----SSELIGCAQVRL 351 (529)
Q Consensus 298 ~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~l~i~v~d~~~~~----~d~~lG~~~i~l 351 (529)
.++|.+...+.+|.|+|++.+.+... ....|.|.+++..... ....+|.+.+||
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL 137 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKL 137 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEES
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEc
Confidence 57888889999999999999988653 3457999998865321 123566666665
No 100
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=90.20 E-value=3.2 Score=35.17 Aligned_cols=125 Identities=11% Similarity=0.113 Sum_probs=83.6
Q ss_pred CcceEEEEEEEEecCCCcc-CCCCCCCcEEEEEEecCCCCeEeccccCCCCCCeeccEEEEEEecC-------CCCEEEE
Q 009664 259 KPVGTLEVKLVQAKGLTNK-DLIGKSDPYAVLFVRPLPEKTKKSKTINNDLNPIWNEHFEFIVEDE-------STQHLVV 330 (529)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~-d~~g~~dpyv~v~~~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~-------~~~~l~i 330 (529)
+..+.+.|+|.++.--+.. ...+..+|+.-+.+.=..-+.+.|.+.. +.+|.+|-+-+|.|.-. .+..+.+
T Consensus 15 ~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~l 93 (156)
T 2yrb_A 15 RGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITL 93 (156)
T ss_dssp SSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEE
T ss_pred CCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEE
Confidence 4678999999998732211 1124467876666653344566777655 88999999888888432 2347889
Q ss_pred EEEECCCCCCCceeEEEEEECcccCCCce-eeEEEEcccccccccCC--ccccEEEEEEEEEE
Q 009664 331 RIYDDEGIQSSELIGCAQVRLCELEPGKV-KDVWLKLVKDLDVQRDT--KYRGQVHLELLYCP 390 (529)
Q Consensus 331 ~v~d~~~~~~d~~lG~~~i~l~~l~~~~~-~~~~~~L~~~~~~~~~~--~~~G~i~l~l~~~p 390 (529)
+++.... +..+.+|.+.++|.++...+. .....+|... ++ ..-|.|.+.++...
T Consensus 94 ELhqa~g-~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~-----~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 94 EVHQAYS-TEYETIAACQLKFHEILEKSGRIFCTASLIGT-----KGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEECS-SCEEEEEEEEECCSHHHHCCSCEEEEEEECBS-----SSCCTTSEEEEEEEEEEE
T ss_pred EEEEeeC-CCceEEEEEEEEhHHhhCcCCceEEEEEEEcC-----CCCcceEEEEEEEEEEec
Confidence 9988754 356789999999999854333 3334455431 23 46799999888863
No 101
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=81.71 E-value=6.3 Score=43.73 Aligned_cols=90 Identities=18% Similarity=0.260 Sum_probs=58.9
Q ss_pred ceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCC---CeEeccccCCCCCCeeccEEEEEEe--c-CCCCEEEEEEEE
Q 009664 261 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE---KTKKSKTINNDLNPIWNEHFEFIVE--D-ESTQHLVVRIYD 334 (529)
Q Consensus 261 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~~~~~t~nP~Wne~f~~~v~--~-~~~~~l~i~v~d 334 (529)
...++|+|.++.++... ..++-||.+.+--++. ....|+.+.-..+|.|||...|.+. + +....|.+.+|+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 46899999999998754 3467788776642221 2344554555678999999888864 2 346689999999
Q ss_pred CCCC--C----------CCceeEEEEEECcc
Q 009664 335 DEGI--Q----------SSELIGCAQVRLCE 353 (529)
Q Consensus 335 ~~~~--~----------~d~~lG~~~i~l~~ 353 (529)
.... + .+..+|.+.++|-+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd 323 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFD 323 (940)
T ss_dssp EC----------------CEEEEEEEEESBC
T ss_pred ecCCccCccccccccccccceEEEEeeeEEC
Confidence 6321 1 23477888888754
No 102
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=78.74 E-value=14 Score=31.28 Aligned_cols=88 Identities=18% Similarity=0.234 Sum_probs=62.4
Q ss_pred EccCCeeEeeecccCCCCCccCceEEEEeecC-------CCCEEEEEEEECCCCCC-CeeEEEEEecccccccce-eeeE
Q 009664 433 LEKDASQKRREVVNDCLNPIWNQTFDFVVEDG-------LHDMLIAEVWDHDTFGK-DYMGRCILTLTRVILEGE-YTDC 503 (529)
Q Consensus 433 ~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-------~~~~L~i~V~D~~~~~~-d~lG~~~i~L~~l~~~~~-~~~w 503 (529)
.-..-+.+-|.+++ ..+|.+|-+-.|.|.-. ....+.+++..... ++ +.||.+.|+|.+++.+.. +..-
T Consensus 49 dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELhqa~g-~~~~tla~~~I~l~~lLe~~~~i~g~ 126 (156)
T 2yrb_A 49 AFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAYS-TEYETIAACQLKFHEILEKSGRIFCT 126 (156)
T ss_dssp CSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEEEECS-SCEEEEEEEEECCSHHHHCCSCEEEE
T ss_pred EEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEEEeeC-CCceEEEEEEEEhHHhhCcCCceEEE
Confidence 33445666777666 88999999999988521 23478888887643 24 689999999999996643 5555
Q ss_pred EEcCCC-----CccEEEEEEEEEe
Q 009664 504 FELDGT-----KSGKLKLHLKWMP 522 (529)
Q Consensus 504 ~~L~~~-----~~G~i~l~~~~~~ 522 (529)
-+|.+. .-|.++..+.++.
T Consensus 127 ~~L~g~~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 127 ASLIGTKGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEECBSSSCCTTSEEEEEEEEEEE
T ss_pred EEEEcCCCCcceEEEEEEEEEEec
Confidence 577642 3578888887764
No 103
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=73.78 E-value=9.7 Score=34.19 Aligned_cols=56 Identities=13% Similarity=0.178 Sum_probs=42.6
Q ss_pred eeEeeecccCCCCCccCceEEEEeecC--CCCEEEEEEEECCCC-----CCCeeEEEEEeccc
Q 009664 438 SQKRREVVNDCLNPIWNQTFDFVVEDG--LHDMLIAEVWDHDTF-----GKDYMGRCILTLTR 493 (529)
Q Consensus 438 ~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~~L~i~V~D~~~~-----~~d~lG~~~i~L~~ 493 (529)
..++|.|.+++.+|.|+|++.+.++.. ....|.++++..... .+..+|..-+||-+
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 468999999999999999999988743 556788998765432 11368888888864
No 104
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=71.81 E-value=27 Score=39.25 Aligned_cols=92 Identities=16% Similarity=0.216 Sum_probs=60.4
Q ss_pred ceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCC---CeEeccccCCCCCCeeccEEEEEEe--c-CCCCEEEEEEEE
Q 009664 261 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE---KTKKSKTINNDLNPIWNEHFEFIVE--D-ESTQHLVVRIYD 334 (529)
Q Consensus 261 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~~~~~t~nP~Wne~f~~~v~--~-~~~~~l~i~v~d 334 (529)
...++|+|..+.++.... ....+-||.+.+--++. ...+|+.+. ..+|.|||..+|.+. + +....|.|.||+
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 368899999999886432 23457788887753222 234444333 567889999888874 3 345689999998
Q ss_pred CCCC----CCCceeEEEEEECccc
Q 009664 335 DEGI----QSSELIGCAQVRLCEL 354 (529)
Q Consensus 335 ~~~~----~~d~~lG~~~i~l~~l 354 (529)
.... ..+..+|.+.++|-+.
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCT
T ss_pred ecCccCcccccceeEEeeeeeEcc
Confidence 6542 1245789999988654
No 105
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=59.93 E-value=10 Score=42.10 Aligned_cols=56 Identities=16% Similarity=0.151 Sum_probs=40.1
Q ss_pred EeeecccCCCCCccCceEEEEee---cCCCCEEEEEEEECCCC----------------CC-CeeEEEEEeccccc
Q 009664 440 KRREVVNDCLNPIWNQTFDFVVE---DGLHDMLIAEVWDHDTF----------------GK-DYMGRCILTLTRVI 495 (529)
Q Consensus 440 ~kT~v~~~t~nP~wne~f~f~v~---~~~~~~L~i~V~D~~~~----------------~~-d~lG~~~i~L~~l~ 495 (529)
.+|+.+.-+.+|.|||.++|.+. -|.++.|.++||+.... ++ ..+|.+.++|-+..
T Consensus 256 ~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 256 RRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp EECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEEC--------------------CEEEEEEEESBCTT
T ss_pred ceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecccCccccccccccccccccccceeEEEEeeeeecCC
Confidence 34555555678999999999874 35889999999974211 12 47999999988753
No 106
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=58.25 E-value=37 Score=37.71 Aligned_cols=92 Identities=13% Similarity=0.144 Sum_probs=55.8
Q ss_pred eEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCCC--eEeccccCCCCCCeeccEEEEEEe--c-CCCCEEEEEEEECC
Q 009664 262 GTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPEK--TKKSKTINNDLNPIWNEHFEFIVE--D-ESTQHLVVRIYDDE 336 (529)
Q Consensus 262 g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~--~~kT~~~~~t~nP~Wne~f~~~v~--~-~~~~~l~i~v~d~~ 336 (529)
..++|+|..+....-.. ...++-||.+.+--++.. ..+|..+.-+.+|.|||...|.+. + |....|.+.+|+..
T Consensus 218 ~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 57888888876422111 134567877765422211 233444445668999999888764 3 34568999999843
Q ss_pred CC----------------CCCceeEEEEEECccc
Q 009664 337 GI----------------QSSELIGCAQVRLCEL 354 (529)
Q Consensus 337 ~~----------------~~d~~lG~~~i~l~~l 354 (529)
.. ++...+|.+.++|-+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp C--------------------CEEEEEEEESBCT
T ss_pred cCccccccccccccccccccceeEEEEeeeeecC
Confidence 21 1344788888888654
No 107
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=55.46 E-value=11 Score=42.40 Aligned_cols=73 Identities=23% Similarity=0.294 Sum_probs=49.2
Q ss_pred ceEEEEEEEEecCCCccCCCCCCCcEEEEEEecCCC---CeEeccccCCCCCCeeccEEEEEEe--c-CCCCEEEEEEEE
Q 009664 261 VGTLEVKLVQAKGLTNKDLIGKSDPYAVLFVRPLPE---KTKKSKTINNDLNPIWNEHFEFIVE--D-ESTQHLVVRIYD 334 (529)
Q Consensus 261 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~~~~~t~nP~Wne~f~~~v~--~-~~~~~l~i~v~d 334 (529)
...++|+|..+.++... ..++-|+.+.+--++. ...+|+.+.-+.+|.|||...|.+. + +....|.+.+|+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 46899999999998754 3456777655532111 1234554555678999999888864 2 345689999998
Q ss_pred CC
Q 009664 335 DE 336 (529)
Q Consensus 335 ~~ 336 (529)
..
T Consensus 429 ~~ 430 (1092)
T 2y3a_A 429 VL 430 (1092)
T ss_dssp C-
T ss_pred ec
Confidence 63
No 108
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=51.44 E-value=25 Score=39.48 Aligned_cols=71 Identities=13% Similarity=0.050 Sum_probs=46.2
Q ss_pred CceEEEEEEEccCC-eeEeeecccCCCCCccCceEEEEee---cCCCCEEEEEEEECCCC----CC-CeeEEEEEecccc
Q 009664 424 GANGTEAIELEKDA-SQKRREVVNDCLNPIWNQTFDFVVE---DGLHDMLIAEVWDHDTF----GK-DYMGRCILTLTRV 494 (529)
Q Consensus 424 ~~l~v~~~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~---~~~~~~L~i~V~D~~~~----~~-d~lG~~~i~L~~l 494 (529)
-|+.+.+......- ...+|+.+. ..+|.|||.++|.+. -|..+.|.|+||+.... .. ..||.+.++|-+.
T Consensus 377 ~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 377 IYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCCCCCC-------CCEEEEEESBCT
T ss_pred EEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEEecCccCcccccceeEEeeeeeEcc
Confidence 45555543332221 234455444 567889999999884 35889999999986542 12 4799999999875
Q ss_pred c
Q 009664 495 I 495 (529)
Q Consensus 495 ~ 495 (529)
.
T Consensus 456 ~ 456 (1091)
T 3hhm_A 456 T 456 (1091)
T ss_dssp T
T ss_pred C
Confidence 3
No 109
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=51.42 E-value=23 Score=39.25 Aligned_cols=55 Identities=18% Similarity=0.202 Sum_probs=40.4
Q ss_pred EeeecccCCCCCccCceEEEEee---cCCCCEEEEEEEECCCC--C----------C-CeeEEEEEecccc
Q 009664 440 KRREVVNDCLNPIWNQTFDFVVE---DGLHDMLIAEVWDHDTF--G----------K-DYMGRCILTLTRV 494 (529)
Q Consensus 440 ~kT~v~~~t~nP~wne~f~f~v~---~~~~~~L~i~V~D~~~~--~----------~-d~lG~~~i~L~~l 494 (529)
..|+.+....+|.|||.++|.+. -|.++.|.|+||+.... + . ..+|.+.++|-+-
T Consensus 254 ~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 254 VSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAVVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEEC----------------CEEEEEEEEESBCT
T ss_pred eecccccCCCCcccceEEEcccccccCCcccEEEEEEEEecCCccCccccccccccccceEEEEeeeEECC
Confidence 45555555788999999999875 35889999999995221 1 1 3899999999874
No 110
>1ewf_A BPI, bactericidal/permeability-increasing protein; lipid-binding, lipopolysaccharide-binding, antibiotic; HET: PC1; 1.70A {Homo sapiens} SCOP: d.83.1.1 d.83.1.1 PDB: 1bp1_A*
Probab=29.32 E-value=4.3e+02 Score=26.12 Aligned_cols=20 Identities=5% Similarity=0.208 Sum_probs=15.6
Q ss_pred eeeEEEEEEEEEEEEEEEEe
Q 009664 164 ALPVQVKNIGFTGVFRLIFR 183 (529)
Q Consensus 164 ~~~v~v~~~~~~g~~rv~l~ 183 (529)
.+.+.++++.+.+.+|+...
T Consensus 103 ~~~~~v~~v~i~~~~~l~~~ 122 (456)
T 1ewf_A 103 NFDLSIEGMSISADLKLGSN 122 (456)
T ss_dssp EEEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEeeEEEEEEEEEeec
Confidence 56677888888888888766
No 111
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=28.08 E-value=49 Score=37.25 Aligned_cols=55 Identities=11% Similarity=0.028 Sum_probs=38.2
Q ss_pred EeeecccCCCCCccCceEEEEee---cCCCCEEEEEEEECCCC----------------------CC-CeeEEEEEeccc
Q 009664 440 KRREVVNDCLNPIWNQTFDFVVE---DGLHDMLIAEVWDHDTF----------------------GK-DYMGRCILTLTR 493 (529)
Q Consensus 440 ~kT~v~~~t~nP~wne~f~f~v~---~~~~~~L~i~V~D~~~~----------------------~~-d~lG~~~i~L~~ 493 (529)
.+|+.+....+|.|||.++|.+. -|.++.|.|+||+.... +. ..+|.+.++|-+
T Consensus 390 ~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd 469 (1092)
T 2y3a_A 390 VVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFD 469 (1092)
T ss_dssp CBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC------------------------------CCEEEEESBC
T ss_pred eecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEecCccccccccccccccccccccccccccceeEEEeeeeEC
Confidence 34555555778999999999874 34789999999985200 11 378999998877
Q ss_pred c
Q 009664 494 V 494 (529)
Q Consensus 494 l 494 (529)
-
T Consensus 470 ~ 470 (1092)
T 2y3a_A 470 F 470 (1092)
T ss_dssp T
T ss_pred C
Confidence 4
No 112
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=27.48 E-value=4.9 Score=25.11 Aligned_cols=14 Identities=21% Similarity=0.702 Sum_probs=7.4
Q ss_pred hhhhHHHHHHHhhe
Q 009664 4 FFGLVVGLVVGLGI 17 (529)
Q Consensus 4 ~~g~~~~~~~g~~l 17 (529)
+-|+.+|.++|+++
T Consensus 13 IAGiVvG~v~gv~l 26 (38)
T 2k1k_A 13 IVAVIFGLLLGAAL 26 (38)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred eeeeehHHHHHHHH
Confidence 44555565555543
No 113
>2zt9_E Cytochrome B6-F complex subunit 6; photosynthesis, heme B,2Fe-2S protei cytochrome F; HET: HEM UMQ CLA OPC SQD BCR; 3.00A {Nostoc SP}
Probab=21.74 E-value=26 Score=20.65 Aligned_cols=11 Identities=45% Similarity=1.014 Sum_probs=4.7
Q ss_pred hhhhHHHHHHH
Q 009664 4 FFGLVVGLVVG 14 (529)
Q Consensus 4 ~~g~~~~~~~g 14 (529)
++|+.+|+.+|
T Consensus 14 ~~~iA~GL~fG 24 (31)
T 2zt9_E 14 FTGIAAGLLFG 24 (31)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34444444444
Done!