Query 009666
Match_columns 529
No_of_seqs 127 out of 190
Neff 2.6
Searched_HMMs 29240
Date Mon Mar 25 10:19:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009666.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009666hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1h3o_B Transcription initiatio 100.0 3.1E-33 1.1E-37 229.3 9.4 75 398-472 2-76 (76)
2 2hue_C Histone H4; mini beta s 99.0 8.5E-10 2.9E-14 90.5 7.1 78 397-476 6-83 (84)
3 1id3_B Histone H4; nucleosome 98.9 1.8E-09 6.2E-14 92.0 7.6 79 396-476 23-101 (102)
4 1tzy_D Histone H4-VI; histone- 98.9 4E-09 1.4E-13 89.3 7.4 79 396-476 24-102 (103)
5 2yfw_B Histone H4, H4; cell cy 98.8 5.3E-09 1.8E-13 88.7 6.9 78 397-476 25-102 (103)
6 1ku5_A HPHA, archaeal histon; 98.7 2.3E-08 8E-13 78.8 7.3 64 401-465 6-69 (70)
7 1b67_A Protein (histone HMFA); 98.6 8.4E-08 2.9E-12 74.8 7.5 65 401-466 2-66 (68)
8 3b0c_W CENP-W, centromere prot 98.6 7.7E-08 2.6E-12 77.3 7.1 71 398-468 1-71 (76)
9 3b0c_T CENP-T, centromere prot 98.6 8.6E-08 2.9E-12 82.7 7.2 72 399-471 5-76 (111)
10 1taf_A TFIID TBP associated fa 98.4 6.4E-07 2.2E-11 72.2 8.2 63 405-468 5-67 (68)
11 1n1j_A NF-YB; histone-like PAI 98.4 1.2E-06 4.3E-11 72.3 8.4 70 397-466 4-74 (93)
12 1f1e_A Histone fold protein; a 98.4 1E-06 3.5E-11 80.4 8.6 73 395-468 76-148 (154)
13 2ly8_A Budding yeast chaperone 98.3 7.2E-07 2.5E-11 78.9 6.8 62 415-477 60-121 (121)
14 2l5a_A Histone H3-like centrom 98.2 3.7E-06 1.3E-10 81.4 9.3 77 399-477 151-235 (235)
15 3nqj_A Histone H3-like centrom 98.2 4.5E-06 1.5E-10 69.6 7.5 65 401-465 3-73 (82)
16 1jfi_B DR1 protein, transcript 98.2 5.2E-06 1.8E-10 77.5 8.6 72 395-466 9-80 (179)
17 2hue_B Histone H3; mini beta s 98.1 7.2E-06 2.5E-10 67.6 7.6 66 401-466 3-72 (77)
18 3r45_A Histone H3-like centrom 98.1 3.7E-06 1.3E-10 77.3 6.5 70 396-465 72-147 (156)
19 3nqu_A Histone H3-like centrom 98.1 5.2E-06 1.8E-10 75.2 6.6 70 396-465 56-131 (140)
20 2yfv_A Histone H3-like centrom 98.0 6.8E-06 2.3E-10 70.5 6.6 70 396-465 22-98 (100)
21 1tzy_C Histone H3; histone-fol 98.0 1.2E-05 4E-10 72.4 8.1 71 396-466 57-131 (136)
22 3b0b_B CENP-S, centromere prot 98.0 5.4E-06 1.8E-10 71.9 5.1 61 407-467 25-87 (107)
23 1taf_B TFIID TBP associated fa 98.0 3.2E-05 1.1E-09 62.8 8.9 66 399-465 4-69 (70)
24 3v9r_A MHF1, uncharacterized p 97.9 2.1E-05 7E-10 66.5 7.6 61 408-468 19-81 (90)
25 1f1e_A Histone fold protein; a 97.8 3.6E-05 1.2E-09 70.2 8.1 66 401-466 4-69 (154)
26 2byk_B Chrac-14; nucleosome sl 97.8 4.1E-05 1.4E-09 67.5 7.5 71 397-467 5-76 (128)
27 4dra_A Centromere protein S; D 97.8 2.7E-05 9.1E-10 68.4 5.9 60 409-468 35-96 (113)
28 1n1j_B NF-YC; histone-like PAI 97.6 0.00012 4.1E-09 61.3 7.4 77 395-471 13-89 (97)
29 3vh5_A CENP-S; histone fold, c 97.5 9.4E-05 3.2E-09 67.1 5.8 54 416-469 36-89 (140)
30 2nqb_D Histone H2B; nucleosome 97.5 0.00016 5.5E-09 64.5 6.9 63 405-467 37-99 (123)
31 1tzy_B Histone H2B; histone-fo 97.4 0.00023 7.8E-09 63.7 6.8 63 405-467 40-102 (126)
32 3b0b_C CENP-X, centromere prot 97.3 0.0006 2.1E-08 56.6 7.6 69 396-464 3-73 (81)
33 4g92_C HAPE; transcription fac 97.3 0.00096 3.3E-08 57.9 8.5 74 397-470 37-110 (119)
34 2jss_A Chimera of histone H2B. 97.1 0.0017 5.8E-08 60.2 8.5 64 404-467 6-69 (192)
35 2l5a_A Histone H3-like centrom 97.0 0.00093 3.2E-08 64.9 6.7 76 399-475 9-91 (235)
36 1jfi_A Transcription regulator 97.0 0.0011 3.8E-08 55.7 5.8 74 398-471 8-81 (98)
37 4dra_E Centromere protein X; D 96.9 0.003 1E-07 53.0 8.0 67 398-464 9-77 (84)
38 2nqb_C Histone H2A; nucleosome 96.5 0.0059 2E-07 53.8 7.4 68 399-466 21-88 (123)
39 2f8n_G Core histone macro-H2A. 96.5 0.0067 2.3E-07 53.2 7.3 68 399-466 20-87 (120)
40 1tzy_A Histone H2A-IV; histone 96.4 0.0073 2.5E-07 53.6 7.3 68 399-466 23-90 (129)
41 1id3_C Histone H2A.1; nucleoso 96.4 0.0061 2.1E-07 54.2 6.6 68 399-466 23-90 (131)
42 2f8n_K Histone H2A type 1; nuc 96.4 0.0069 2.4E-07 55.2 7.1 68 399-466 42-109 (149)
43 1bh9_B TAFII28; histone fold, 96.2 0.018 6E-07 48.4 8.3 65 401-466 16-81 (89)
44 1f66_C Histone H2A.Z; nucleoso 96.0 0.014 4.8E-07 51.8 7.1 69 399-467 25-94 (128)
45 2byk_A Chrac-16; nucleosome sl 95.7 0.014 4.7E-07 52.4 5.7 75 397-471 15-90 (140)
46 2jss_A Chimera of histone H2B. 95.7 0.028 9.7E-07 52.1 7.9 68 399-466 103-171 (192)
47 3uk6_A RUVB-like 2; hexameric 93.0 0.31 1.1E-05 45.5 8.4 67 402-468 259-331 (368)
48 3v9r_B MHF2, uncharacterized p 91.1 0.24 8.3E-06 42.2 4.7 60 402-461 2-70 (88)
49 1h3o_A Transcription initiatio 90.4 0.28 9.5E-06 40.6 4.3 49 404-453 9-57 (75)
50 2r44_A Uncharacterized protein 89.7 0.88 3E-05 42.3 7.7 73 399-472 207-302 (331)
51 2qby_A CDC6 homolog 1, cell di 89.2 1.6 5.4E-05 40.0 8.8 67 401-467 196-272 (386)
52 1g8p_A Magnesium-chelatase 38 89.0 1.1 3.9E-05 41.1 7.8 56 417-472 265-327 (350)
53 2v1u_A Cell division control p 87.8 0.75 2.6E-05 42.3 5.8 66 402-467 201-276 (387)
54 3aji_B S6C, proteasome (prosom 85.3 0.41 1.4E-05 37.3 2.3 43 436-483 40-82 (83)
55 3bos_A Putative DNA replicatio 84.1 2 6.8E-05 36.6 6.2 62 403-465 175-241 (242)
56 1r6b_X CLPA protein; AAA+, N-t 83.5 5.4 0.00018 41.9 10.4 65 416-480 369-446 (758)
57 1fnn_A CDC6P, cell division co 83.2 2.3 7.9E-05 39.3 6.7 66 402-467 193-274 (389)
58 2qby_B CDC6 homolog 3, cell di 83.1 4.2 0.00014 37.7 8.4 64 402-467 197-270 (384)
59 3kw6_A 26S protease regulatory 81.8 0.69 2.4E-05 35.7 2.2 44 425-468 27-74 (78)
60 3h4m_A Proteasome-activating n 81.4 1.8 6.1E-05 39.0 5.1 67 402-468 188-259 (285)
61 3vlf_B 26S protease regulatory 81.0 0.61 2.1E-05 37.4 1.7 42 426-467 26-71 (88)
62 3ox6_A Calcium-binding protein 80.9 7 0.00024 30.6 7.8 73 396-470 22-120 (153)
63 3nbx_X ATPase RAVA; AAA+ ATPas 79.8 6.8 0.00023 40.6 9.4 116 399-516 206-338 (500)
64 1lv7_A FTSH; alpha/beta domain 79.5 1.9 6.5E-05 38.6 4.6 65 403-467 183-252 (257)
65 2ly8_A Budding yeast chaperone 79.2 3.3 0.00011 36.7 5.9 50 401-450 1-57 (121)
66 3k1j_A LON protease, ATP-depen 79.2 5.1 0.00018 41.5 8.3 51 416-466 311-374 (604)
67 1fh1_A NODF, nodulation protei 77.8 1.2 3.9E-05 35.5 2.4 37 448-484 39-78 (92)
68 2c9o_A RUVB-like 1; hexameric 77.3 4.8 0.00017 40.0 7.2 68 402-469 366-439 (456)
69 1w5s_A Origin recognition comp 76.1 8.6 0.0003 35.9 8.1 68 401-468 214-294 (412)
70 2chg_A Replication factor C sm 75.5 4.3 0.00015 33.6 5.3 63 401-465 160-224 (226)
71 3iot_A Maltose-binding protein 74.8 0.59 2E-05 45.3 -0.1 14 319-332 381-394 (449)
72 2qz4_A Paraplegin; AAA+, SPG7, 74.8 3.1 0.00011 36.6 4.5 66 402-467 177-249 (262)
73 1ixz_A ATP-dependent metallopr 74.0 2.1 7.2E-05 38.2 3.3 62 403-464 187-253 (254)
74 3mfq_A TROA, high-affinity zin 73.4 8.1 0.00028 36.8 7.3 74 400-473 105-185 (282)
75 1hqc_A RUVB; extended AAA-ATPa 73.1 11 0.00036 34.4 7.7 66 401-466 167-237 (324)
76 3pvs_A Replication-associated 72.3 14 0.00047 37.4 9.1 67 401-467 164-244 (447)
77 4b8c_D Glucose-repressible alc 71.5 0.36 1.2E-05 51.0 -2.6 12 492-503 423-434 (727)
78 3gi1_A LBP, laminin-binding pr 70.8 3.9 0.00013 39.0 4.5 105 401-512 124-233 (286)
79 1in4_A RUVB, holliday junction 70.6 7.6 0.00026 36.8 6.4 67 400-466 178-249 (334)
80 2lte_A Specialized acyl carrie 73.4 0.88 3E-05 37.7 0.0 32 444-476 50-81 (103)
81 2krk_A 26S protease regulatory 70.6 1.8 6E-05 34.9 1.8 42 426-467 36-81 (86)
82 1elk_A Target of MYB1; superhe 70.6 11 0.00037 33.5 7.0 62 401-473 93-156 (157)
83 1iy2_A ATP-dependent metallopr 70.4 2.2 7.4E-05 39.0 2.5 62 403-464 211-277 (278)
84 1pq4_A Periplasmic binding pro 69.0 2.7 9.2E-05 40.2 3.0 104 400-512 134-242 (291)
85 2i5u_A DNAD domain protein; st 68.6 19 0.00066 28.7 7.5 56 407-465 4-68 (83)
86 3f9v_A Minichromosome maintena 67.8 2.9 0.0001 43.8 3.2 47 419-465 521-585 (595)
87 1x5b_A Signal transducing adap 66.8 16 0.00055 32.7 7.4 68 400-479 90-157 (163)
88 1bh9_A TAFII18; histone fold, 66.8 18 0.00062 27.0 6.4 41 405-445 4-44 (45)
89 1wwi_A Hypothetical protein TT 65.7 11 0.00039 34.6 6.2 59 401-460 2-60 (148)
90 3cx3_A Lipoprotein; zinc-bindi 65.6 4.5 0.00015 38.3 3.7 106 400-512 121-231 (284)
91 1njg_A DNA polymerase III subu 65.5 10 0.00036 31.4 5.5 59 402-464 185-248 (250)
92 2prs_A High-affinity zinc upta 65.3 4.5 0.00016 38.2 3.7 107 400-513 118-229 (284)
93 2o1e_A YCDH; alpha-beta protei 65.3 3.2 0.00011 40.2 2.7 106 400-512 134-244 (312)
94 3h7c_X Agmatine deiminase; str 64.5 2.7 9.1E-05 43.1 2.1 69 439-508 175-265 (383)
95 3f8t_A Predicted ATPase involv 64.5 11 0.00039 40.0 6.8 68 398-465 390-481 (506)
96 3k21_A PFCDPK3, calcium-depend 63.2 33 0.0011 29.2 8.4 69 395-465 62-149 (191)
97 2i7a_A Calpain 13; calcium-dep 62.2 21 0.00071 30.9 7.0 73 393-467 12-104 (174)
98 3eie_A Vacuolar protein sortin 61.9 3.5 0.00012 38.7 2.2 59 402-460 184-248 (322)
99 1ofh_A ATP-dependent HSL prote 61.4 7.5 0.00026 34.8 4.2 50 418-467 233-299 (310)
100 2aao_A CDPK, calcium-dependent 61.1 41 0.0014 26.9 8.1 28 439-466 100-127 (166)
101 2lse_A Four helix bundle prote 65.1 1.8 6E-05 36.9 0.0 81 429-512 9-90 (101)
102 2l4b_A Acyl carrier protein; i 60.6 2.9 9.9E-05 32.4 1.2 31 444-474 35-65 (88)
103 2kwl_A ACP, acyl carrier prote 60.5 2.5 8.4E-05 32.3 0.8 28 448-475 37-64 (84)
104 3syl_A Protein CBBX; photosynt 60.4 7.9 0.00027 35.1 4.2 66 403-468 205-287 (309)
105 2p62_A Hypothetical protein PH 59.5 2.2 7.7E-05 41.8 0.5 81 417-509 145-233 (241)
106 2dhr_A FTSH; AAA+ protein, hex 58.9 4.1 0.00014 42.3 2.3 65 403-467 202-271 (499)
107 2ce7_A Cell division protein F 58.0 14 0.00048 38.1 6.1 60 408-467 192-256 (476)
108 2r62_A Cell division protease 56.8 1.3 4.4E-05 39.6 -1.6 63 404-466 185-252 (268)
109 2pvb_A Protein (parvalbumin); 56.8 23 0.00078 27.0 5.7 65 402-467 6-70 (108)
110 1r4v_A Hypothetical protein AQ 56.7 14 0.00049 34.6 5.3 61 399-460 24-84 (171)
111 3hvm_A Agmatine deiminase; hyd 56.2 4.1 0.00014 40.9 1.7 68 439-507 153-242 (330)
112 3pfi_A Holliday junction ATP-d 55.9 9.8 0.00033 35.2 4.1 65 402-466 184-253 (338)
113 3qrx_A Centrin; calcium-bindin 55.6 78 0.0027 25.3 9.0 70 395-466 38-129 (169)
114 2lnk_A Protein S100-A4; EF-han 55.6 52 0.0018 27.5 8.2 48 397-444 35-96 (113)
115 1dv5_A APO-DCP, APO-D-alanyl c 54.8 3.2 0.00011 32.1 0.5 29 446-474 30-58 (80)
116 2zyc_A Peptidoglycan hydrolase 54.6 7.2 0.00025 35.5 2.9 41 431-472 1-41 (170)
117 1juq_A ADP-ribosylation factor 54.6 28 0.00095 31.5 6.7 67 400-479 88-159 (171)
118 1sxj_D Activator 1 41 kDa subu 54.6 9.7 0.00033 34.9 3.8 64 402-465 192-261 (353)
119 3fay_A P195, RAS GTPase-activa 54.3 23 0.00079 35.4 6.7 26 488-513 259-284 (387)
120 2mys_C Myosin; muscle protein, 54.1 67 0.0023 24.8 8.1 22 395-416 18-39 (149)
121 2cgq_A Acyl carrier protein AC 54.0 1.1 3.9E-05 38.2 -2.3 50 423-474 30-79 (113)
122 1wer_A P120GAP; GTPase activat 54.0 41 0.0014 32.7 8.3 27 486-512 207-233 (334)
123 3fi7_A LMO1076 protein; lister 52.9 13 0.00046 34.4 4.5 52 419-471 11-68 (183)
124 1rr7_A Middle operon regulator 52.1 15 0.00052 31.9 4.5 55 408-474 12-73 (129)
125 2qp9_X Vacuolar protein sortin 51.6 12 0.0004 36.1 4.0 51 402-452 217-273 (355)
126 3fs7_A Parvalbumin, thymic; ca 51.6 22 0.00076 27.1 4.9 64 400-466 5-70 (109)
127 2keb_A DNA polymerase subunit 51.5 28 0.00096 30.4 5.9 63 398-467 22-91 (101)
128 1exr_A Calmodulin; high resolu 51.5 84 0.0029 24.9 8.4 71 395-466 20-111 (148)
129 3bxj_A RAS GTPase-activating p 51.2 33 0.0011 34.9 7.4 27 486-512 362-388 (483)
130 3gzm_A Acyl carrier protein; h 50.9 3.9 0.00013 31.2 0.5 27 448-474 33-59 (81)
131 1rro_A RAT oncomodulin; calciu 50.8 24 0.00082 26.9 5.0 66 401-467 5-70 (108)
132 3e3r_A Calcyphosin, calcyphosi 50.7 42 0.0014 27.9 6.8 70 395-466 47-137 (204)
133 3dtp_E RLC, myosin regulatory 50.6 49 0.0017 28.2 7.3 68 395-464 67-152 (196)
134 1k9u_A Polcalcin PHL P 7; poll 50.3 29 0.001 24.9 5.1 21 395-415 13-33 (78)
135 4e2i_2 DNA polymerase alpha su 50.0 17 0.00058 30.3 4.2 40 407-446 5-52 (78)
136 4b4t_K 26S protease regulatory 49.5 16 0.00054 37.4 4.8 50 419-468 361-415 (428)
137 3us6_A Histidine-containing ph 49.4 28 0.00095 30.7 5.8 49 404-452 7-66 (153)
138 3pxi_A Negative regulator of g 49.0 57 0.002 34.4 9.0 49 402-450 325-388 (758)
139 3fwb_A Cell division control p 48.7 69 0.0024 25.2 7.5 70 395-466 33-124 (161)
140 1toa_A Tromp-1, protein (perip 48.7 7.5 0.00026 37.7 2.2 109 397-512 136-251 (313)
141 3e3r_A Calcyphosin, calcyphosi 48.7 11 0.00039 31.4 3.0 14 458-471 190-203 (204)
142 5pal_A Parvalbumin; calcium-bi 48.5 19 0.00064 27.5 4.0 66 400-467 4-70 (109)
143 3ujp_A Mn transporter subunit; 48.4 18 0.00062 35.2 4.8 107 399-512 131-244 (307)
144 2lv7_A Calcium-binding protein 48.4 35 0.0012 27.3 5.7 20 395-414 46-65 (100)
145 1bu3_A Calcium-binding protein 48.3 29 0.001 26.4 5.1 65 400-467 5-71 (109)
146 3vfd_A Spastin; ATPase, microt 48.2 42 0.0014 32.3 7.3 65 402-466 282-364 (389)
147 4b4t_I 26S protease regulatory 48.0 10 0.00036 39.4 3.2 60 408-467 359-423 (437)
148 2qnw_A Acyl carrier protein; m 47.9 4.3 0.00015 30.9 0.3 26 449-474 36-61 (82)
149 2dnw_A Acyl carrier protein; A 47.7 2.2 7.4E-05 34.2 -1.5 25 450-474 45-69 (99)
150 1k94_A Grancalcin; penta-EF-ha 47.6 70 0.0024 25.9 7.5 78 439-520 71-154 (165)
151 1mhq_A ADP-ribosylation factor 47.1 42 0.0014 29.6 6.6 65 401-478 77-144 (148)
152 1juo_A Sorcin; calcium-binding 47.0 49 0.0017 27.9 6.7 122 395-520 42-187 (198)
153 1rwy_A Parvalbumin alpha; EF-h 46.6 25 0.00086 26.7 4.5 66 401-467 5-70 (109)
154 1yvi_A Histidine-containing ph 46.3 30 0.001 29.9 5.4 45 404-448 7-63 (149)
155 2f2o_A Calmodulin fused with c 45.9 1.1E+02 0.0037 24.8 8.4 27 440-466 86-112 (179)
156 4b4t_H 26S protease regulatory 45.4 13 0.00044 39.0 3.4 63 405-467 383-450 (467)
157 1top_A Troponin C; contractIle 45.3 86 0.0029 24.7 7.6 29 438-466 96-124 (162)
158 1xvl_A Mn transporter, MNTC pr 45.2 12 0.00041 36.5 3.0 108 398-512 144-258 (321)
159 2jq4_A AGR_C_4658P, hypothetic 45.0 2.4 8.3E-05 35.0 -1.7 24 450-473 53-76 (105)
160 2dzn_B 26S protease regulatory 44.4 18 0.0006 28.2 3.3 32 436-467 37-68 (82)
161 2chq_A Replication factor C sm 44.3 31 0.0011 30.8 5.4 62 402-465 161-224 (319)
162 3pm8_A PFCDPK2, calcium-depend 44.1 57 0.0019 27.9 6.8 34 395-429 67-100 (197)
163 2jnf_A Troponin C; stretch act 44.0 90 0.0031 24.6 7.5 34 396-431 25-58 (158)
164 3ncv_A DNA mismatch repair pro 43.8 13 0.00044 34.8 2.9 39 439-478 161-199 (220)
165 1pva_A Parvalbumin; calcium bi 43.2 30 0.001 26.3 4.4 64 401-467 6-71 (110)
166 3mse_B Calcium-dependent prote 43.1 62 0.0021 26.9 6.7 34 395-431 49-82 (180)
167 1x3o_A Acyl carrier protein; s 42.9 5.6 0.00019 29.6 0.2 26 449-474 34-59 (80)
168 2bl0_C Myosin regulatory light 42.6 1.2E+02 0.004 23.5 7.9 35 395-431 16-50 (142)
169 2kyc_A Parvalbumin-3, parvalbu 42.2 28 0.00095 26.5 4.1 23 400-422 4-26 (108)
170 3jux_A Protein translocase sub 42.1 6.6 0.00022 44.1 0.7 40 422-467 666-705 (822)
171 3nxa_A Protein S100-A16; S100 41.9 68 0.0023 25.8 6.6 49 398-446 27-88 (100)
172 2lol_A ACP, acyl carrier prote 41.6 3.4 0.00012 31.1 -1.1 26 449-474 35-60 (81)
173 1sxj_B Activator 1 37 kDa subu 41.6 31 0.0011 30.9 4.9 63 401-465 165-229 (323)
174 1dlw_A Hemoglobin; oxygen stor 41.4 43 0.0015 27.3 5.3 80 425-507 9-93 (116)
175 3li6_A Calcium-binding protein 41.0 84 0.0029 21.5 6.4 43 424-466 22-64 (66)
176 1nkt_A Preprotein translocase 40.9 10 0.00035 42.9 2.0 48 423-473 697-744 (922)
177 3kdg_A DNA mismatch repair pro 40.3 23 0.0008 32.1 3.9 39 439-478 138-176 (197)
178 1jfj_A Ehcabp, calcium-binding 40.0 53 0.0018 24.8 5.3 21 395-415 10-30 (134)
179 1gjy_A Sorcin, CP-22, V19; cal 39.6 1.5E+02 0.0052 24.0 8.6 121 396-520 12-156 (167)
180 3u0k_A Rcamp; fluorescent prot 39.4 76 0.0026 33.3 8.0 36 395-431 312-347 (440)
181 1alv_A Calpain, S-camld; calci 39.2 94 0.0032 25.4 7.1 77 440-520 79-162 (173)
182 3pxg_A Negative regulator of g 39.2 46 0.0016 33.4 6.2 65 402-466 325-405 (468)
183 4hw4_A Induced myeloid leukemi 39.0 25 0.00085 31.6 3.8 46 404-452 55-110 (157)
184 3akb_A Putative calcium bindin 38.9 64 0.0022 25.5 5.9 61 407-469 100-163 (166)
185 3ejb_A Acyl carrier protein; p 38.9 4.8 0.00016 32.6 -0.8 27 448-474 50-76 (97)
186 3i5g_C Myosin catalytic light 38.7 45 0.0015 28.1 5.2 35 396-432 96-130 (159)
187 3k9o_A Ubiquitin-conjugating e 38.6 78 0.0027 28.8 7.1 47 406-452 113-159 (201)
188 2ovk_C Myosin catalytic light 38.2 20 0.00067 28.8 2.8 70 396-466 22-113 (159)
189 3hh8_A Metal ABC transporter s 37.8 12 0.00042 35.9 1.7 106 399-511 124-236 (294)
190 2pmy_A RAS and EF-hand domain- 37.6 49 0.0017 25.0 4.8 19 449-467 72-90 (91)
191 3ce7_A Specific mitochodrial a 37.4 2.6 8.8E-05 35.1 -2.7 27 448-474 51-77 (107)
192 4b4t_J 26S protease regulatory 37.3 36 0.0012 34.9 5.2 64 404-467 321-389 (405)
193 2znd_A Programmed cell death p 37.2 63 0.0022 26.3 5.7 27 440-466 76-102 (172)
194 2kn2_A Calmodulin; S MAPK phos 37.2 77 0.0026 23.3 5.8 21 395-415 19-39 (92)
195 2ava_A ACP I, acyl carrier pro 36.8 5.9 0.0002 30.0 -0.5 26 449-474 33-58 (82)
196 1qv0_A Obelin, OBL; photoprote 36.7 56 0.0019 26.8 5.4 22 447-468 158-179 (195)
197 1q80_A SCP, sarcoplasmic calci 36.6 48 0.0016 26.6 4.8 21 395-415 16-36 (174)
198 2kgr_A Intersectin-1; structur 36.4 68 0.0023 25.9 5.8 46 445-490 55-105 (111)
199 1dx0_A Prion protein; brain, r 36.0 45 0.0016 32.4 5.3 22 485-509 184-205 (219)
200 2xyk_A 2-ON-2 hemoglobin; oxyg 35.5 60 0.002 27.7 5.5 77 425-507 15-105 (133)
201 3cjh_B Mitochondrial import in 35.5 1.4E+02 0.0047 23.0 7.0 48 402-449 5-63 (64)
202 1uw4_B UPF2, regulator of nons 35.5 29 0.001 33.6 3.9 62 403-467 20-93 (248)
203 1l8q_A Chromosomal replication 35.4 27 0.00091 32.3 3.5 77 404-485 168-253 (324)
204 2ehs_A ACP, acyl carrier prote 35.3 5.9 0.0002 29.1 -0.7 25 449-473 30-54 (77)
205 1af8_A Actinorhodin polyketide 35.1 22 0.00075 27.1 2.5 26 450-475 38-63 (86)
206 2kz2_A Calmodulin, CAM; TR2C, 35.0 58 0.002 25.0 4.9 63 403-465 27-92 (94)
207 2obh_A Centrin-2; DNA repair c 34.8 1.4E+02 0.0047 23.8 7.3 29 438-466 79-107 (143)
208 1zbr_A AAQ65385, conserved hyp 34.8 16 0.00055 36.8 2.1 68 439-507 159-248 (349)
209 1iqp_A RFCS; clamp loader, ext 34.7 49 0.0017 29.7 5.0 59 402-462 169-229 (327)
210 1f80_D Acyl carrier protein; t 34.7 4.9 0.00017 30.3 -1.3 25 450-474 37-61 (81)
211 3m89_A FTSZ/tubulin-related pr 34.6 68 0.0023 33.6 6.7 103 413-524 224-348 (427)
212 2lmt_A Calmodulin-related prot 34.4 90 0.0031 25.2 6.2 71 395-466 20-111 (148)
213 1l0i_A Acyl carrier protein; a 34.4 7 0.00024 29.2 -0.4 26 449-474 32-57 (78)
214 2lki_A Putative uncharacterize 34.4 3.6 0.00012 34.3 -2.2 29 446-474 52-81 (105)
215 2dir_A Thump domain-containing 34.2 5.2 0.00018 32.6 -1.3 19 509-527 79-98 (98)
216 2iie_A Integration HOST factor 34.0 60 0.002 30.1 5.6 20 462-481 80-99 (204)
217 2l2e_A Calcium-binding protein 34.0 95 0.0033 25.5 6.4 14 401-414 42-55 (190)
218 2bjv_A PSP operon transcriptio 33.5 53 0.0018 29.3 5.1 39 419-460 208-250 (265)
219 1ggw_A Protein (CDC4P); light 33.5 64 0.0022 25.1 5.0 61 405-466 76-139 (140)
220 3sjs_A URE3-BP sequence specif 33.3 58 0.002 28.6 5.2 31 440-471 119-149 (220)
221 2a7w_A PRA-PH, phosphoribosyl- 33.3 45 0.0015 29.3 4.4 59 421-492 54-112 (116)
222 1s1e_A KV channel interacting 33.3 1.2E+02 0.004 26.7 7.2 31 438-468 125-155 (224)
223 3d8b_A Fidgetin-like protein 1 33.3 34 0.0012 32.7 4.0 45 403-447 252-298 (357)
224 2qac_A Myosin A tail domain in 33.3 1.1E+02 0.0037 24.0 6.4 31 396-428 25-57 (146)
225 2kgr_A Intersectin-1; structur 33.1 35 0.0012 27.7 3.5 18 395-412 24-41 (111)
226 2vaw_A FTSZ, cell division pro 32.9 78 0.0027 32.4 6.8 73 405-478 149-231 (394)
227 3i5g_B Myosin regulatory light 32.8 1.3E+02 0.0044 25.1 7.1 34 395-429 26-59 (153)
228 1fi6_A EH domain protein REPS1 32.8 1.1E+02 0.0039 23.4 6.3 20 395-414 19-38 (92)
229 2kw2_A Specialized acyl carrie 32.8 6.5 0.00022 31.9 -0.9 25 450-474 33-57 (101)
230 2z4s_A Chromosomal replication 32.8 50 0.0017 32.9 5.2 65 403-468 264-333 (440)
231 1k2h_A S100A1, S-100 protein, 32.8 1.4E+02 0.0047 22.0 6.5 17 397-413 22-39 (93)
232 3nso_A Protein S100-A3; EF-han 32.4 1.7E+02 0.0057 23.9 7.5 42 400-441 27-81 (101)
233 2kr5_A PKS, aflatoxin biosynth 32.3 15 0.00053 27.9 1.2 24 451-474 41-64 (89)
234 2afd_A Protein ASL1650; twiste 32.0 19 0.00066 26.9 1.7 24 450-473 43-66 (88)
235 1ofu_A FTSZ, cell division pro 32.0 53 0.0018 32.3 5.2 73 405-478 149-231 (320)
236 1avs_A Troponin C; muscle cont 32.0 1E+02 0.0034 22.8 5.7 19 450-468 68-86 (90)
237 3zyq_A Hepatocyte growth facto 31.5 65 0.0022 30.0 5.5 63 401-476 84-147 (226)
238 1qjt_A EH1, epidermal growth f 31.4 92 0.0031 24.7 5.7 20 395-414 21-40 (99)
239 4ds7_A Calmodulin, CAM; protei 31.3 1.8E+02 0.0061 22.3 7.4 69 396-466 22-112 (147)
240 1jr3_D DNA polymerase III, del 31.3 29 0.00098 32.5 3.1 63 402-467 142-209 (343)
241 1msk_A Cobalamin-dependent met 31.2 95 0.0033 31.3 6.9 68 406-477 172-245 (331)
242 2lvv_A Flagellar calcium-bindi 31.2 48 0.0016 29.1 4.4 24 443-466 138-161 (226)
243 3fes_A ATP-dependent CLP endop 31.2 40 0.0014 28.4 3.7 32 436-467 86-117 (145)
244 2bl0_B Myosin regulatory light 31.2 1.8E+02 0.0061 22.3 7.2 21 395-415 15-35 (145)
245 3h4s_E KCBP interacting Ca2+-b 31.0 1.2E+02 0.0041 24.5 6.4 19 396-414 51-69 (135)
246 1qx2_A Vitamin D-dependent cal 30.8 32 0.0011 24.3 2.6 15 400-414 22-36 (76)
247 1j8m_F SRP54, signal recogniti 30.8 54 0.0018 31.3 4.9 39 404-442 4-56 (297)
248 2qup_A BH1478 protein; structu 30.7 37 0.0013 30.3 3.5 49 404-452 40-93 (145)
249 1c07_A Protein (epidermal grow 30.6 85 0.0029 24.3 5.3 16 445-460 51-66 (95)
250 2jer_A Agmatine deiminase; hyd 30.6 20 0.00067 36.8 2.0 68 439-507 170-258 (389)
251 1ij5_A Plasmodial specific LAV 30.5 1.3E+02 0.0043 28.7 7.4 74 395-471 198-286 (323)
252 1xkn_A Putative peptidyl-argin 30.5 19 0.00064 36.4 1.8 68 439-507 169-257 (355)
253 2ovk_B RLC, myosin regulatory 30.3 1.2E+02 0.0042 23.9 6.3 70 395-466 26-113 (153)
254 3hwr_A 2-dehydropantoate 2-red 30.3 33 0.0011 32.4 3.3 20 434-453 226-245 (318)
255 3e46_A Ubiquitin-conjugating e 30.3 1.1E+02 0.0039 29.3 7.1 48 406-453 165-212 (253)
256 1sxj_A Activator 1 95 kDa subu 30.1 36 0.0012 34.5 3.7 62 402-465 209-272 (516)
257 2cnr_A FAS, ACP, acyl carrier 30.0 8.2 0.00028 28.9 -0.7 27 449-475 36-62 (82)
258 2kkp_A Phage integrase; SAM-li 29.8 39 0.0013 25.7 3.1 11 428-438 9-19 (117)
259 2f33_A Calbindin; EF-hand, Ca2 29.7 1E+02 0.0036 26.4 6.1 20 395-414 113-132 (263)
260 1rq2_A Cell division protein F 29.6 87 0.003 31.9 6.4 73 404-478 148-231 (382)
261 1m45_A MLC1P, myosin light cha 29.6 91 0.0031 24.3 5.3 21 395-415 14-34 (148)
262 1q80_A SCP, sarcoplasmic calci 29.5 38 0.0013 27.2 3.2 64 404-469 5-84 (174)
263 2ktg_A Calmodulin, putative; e 29.3 1E+02 0.0034 22.3 5.2 19 396-414 25-43 (85)
264 1bu3_A Calcium-binding protein 29.0 79 0.0027 24.0 4.7 13 449-461 92-104 (109)
265 1c52_A Cytochrome-C552; electr 28.9 20 0.00068 29.6 1.4 46 453-498 76-128 (131)
266 1r4w_A Glutathione S-transfera 28.9 71 0.0024 28.4 5.1 47 401-451 132-179 (226)
267 3qbr_A SJA, sjchgc06286 protei 28.8 1E+02 0.0034 29.0 6.2 49 407-455 82-141 (179)
268 1juo_A Sorcin; calcium-binding 28.7 1.8E+02 0.0062 24.4 7.4 20 395-414 113-132 (198)
269 1zpy_A Hypothetical protein NE 28.7 20 0.00067 30.8 1.3 44 406-449 23-74 (95)
270 3fh2_A Probable ATP-dependent 28.4 48 0.0016 27.9 3.7 32 436-467 86-117 (146)
271 1dly_A Hemoglobin; oxygen stor 28.4 87 0.003 28.0 5.6 80 425-507 52-138 (164)
272 4b4t_L 26S protease subunit RP 28.3 49 0.0017 34.0 4.4 42 426-467 377-422 (437)
273 3amj_B Zinc peptidase inactive 28.3 12 0.00041 35.0 -0.1 24 498-521 396-421 (424)
274 3cf0_A Transitional endoplasmi 28.1 20 0.00068 33.3 1.4 49 403-451 187-240 (301)
275 3q5i_A Protein kinase; CDPK, m 28.0 1E+02 0.0035 30.3 6.5 20 395-414 365-384 (504)
276 1jba_A GCAP-2, protein (guanyl 28.0 1.5E+02 0.0052 24.8 6.7 69 398-468 36-125 (204)
277 2xxa_A Signal recognition part 27.9 89 0.003 31.7 6.2 40 404-443 6-59 (433)
278 2vap_A FTSZ, cell division pro 27.7 56 0.0019 33.1 4.6 72 405-477 175-255 (364)
279 1o17_A Anthranilate PRT, anthr 27.7 47 0.0016 33.1 4.1 75 407-481 3-86 (345)
280 1jr3_A DNA polymerase III subu 27.6 50 0.0017 30.4 4.0 60 401-464 177-241 (373)
281 3n1e_A Vacuolar protein sortin 27.6 95 0.0033 27.9 5.6 59 421-481 74-135 (141)
282 3b9p_A CG5977-PA, isoform A; A 27.5 1.1E+02 0.0038 27.5 6.2 64 403-466 190-271 (297)
283 1s6i_A CDPK, calcium-dependent 27.5 86 0.0029 26.6 5.2 33 394-428 19-52 (188)
284 1eh2_A EPS15; calcium binding, 27.4 1.9E+02 0.0065 23.6 7.0 36 445-480 55-94 (106)
285 3nuf_A PRD-containing transcri 27.3 28 0.00094 31.1 2.1 101 414-522 5-113 (119)
286 4eto_A Protein S100-A4; calciu 27.1 1.7E+02 0.0059 23.0 6.6 43 400-442 27-82 (93)
287 3rpp_A Glutathione S-transfera 27.1 69 0.0024 29.1 4.8 52 398-453 129-181 (234)
288 3j04_B Myosin regulatory light 27.0 2E+02 0.0068 22.2 6.8 77 394-473 16-110 (143)
289 3htm_A Speckle-type POZ protei 27.0 95 0.0033 25.8 5.3 67 402-469 81-148 (172)
290 2ggz_A Guanylyl cyclase-activa 26.9 1.4E+02 0.0048 25.5 6.5 63 404-466 92-163 (211)
291 2kua_A BCL-2-like protein 10; 26.9 52 0.0018 29.9 3.9 29 421-449 69-108 (170)
292 1wlz_A DJBP, CAP-binding prote 26.9 66 0.0023 24.4 3.9 63 405-467 24-89 (105)
293 2kz2_A Calmodulin, CAM; TR2C, 26.9 86 0.0029 24.0 4.6 35 395-431 39-74 (94)
294 2jq6_A EH domain-containing pr 26.7 1.3E+02 0.0046 26.2 6.3 77 403-481 49-131 (139)
295 2zc2_A DNAD-like replication p 26.6 65 0.0022 24.9 3.9 44 419-464 17-62 (78)
296 2ewo_A Putative agmatine deimi 26.5 28 0.00094 35.5 2.2 68 439-507 174-262 (377)
297 4h5l_A Nucleoprotein; nucleoca 26.4 1.1E+02 0.0039 30.1 6.4 84 397-482 13-109 (253)
298 1pb6_A Hypothetical transcript 26.3 67 0.0023 26.3 4.1 13 424-436 126-138 (212)
299 1exr_A Calmodulin; high resolu 26.2 1.4E+02 0.0048 23.6 5.9 19 396-414 94-112 (148)
300 2l3v_A ACP, acyl carrier prote 26.2 9.2 0.00031 28.5 -1.0 25 450-474 34-58 (79)
301 1bjf_A Neurocalcin delta; calc 26.2 1.6E+02 0.0056 24.0 6.5 30 439-468 100-129 (193)
302 1ls1_A Signal recognition part 26.2 2E+02 0.0069 27.1 8.0 18 405-422 7-24 (295)
303 3ojo_A CAP5O; rossmann fold, c 26.2 1.8E+02 0.0061 29.7 8.0 75 404-478 188-268 (431)
304 2ao9_A Phage protein; structur 26.1 1.4E+02 0.0049 27.0 6.6 44 421-467 72-119 (155)
305 2kci_A Putative acyl carrier p 26.1 13 0.00045 30.2 -0.2 32 444-475 26-57 (87)
306 2pwq_A Ubiquitin conjugating e 26.1 77 0.0026 29.7 5.0 48 406-453 128-175 (216)
307 2f33_A Calbindin; EF-hand, Ca2 26.0 1.1E+02 0.0037 26.3 5.6 19 396-414 27-45 (263)
308 2vxy_A FTSZ, cell division pro 25.9 41 0.0014 34.3 3.3 73 404-477 148-230 (382)
309 1y1x_A Leishmania major homolo 25.9 2.9E+02 0.01 23.1 9.4 70 395-466 37-121 (191)
310 2o2k_A Methionine synthase; C- 25.8 1.3E+02 0.0046 30.6 7.0 68 406-477 183-256 (355)
311 4b4t_M 26S protease regulatory 25.8 67 0.0023 33.0 4.8 42 426-467 377-422 (434)
312 2h2k_A Protein S100-A13; calci 25.7 1.6E+02 0.0055 24.0 6.3 45 400-444 39-93 (106)
313 3khe_A Calmodulin-like domain 25.7 79 0.0027 25.8 4.5 67 403-471 121-190 (191)
314 2ovk_C Myosin catalytic light 25.7 1.1E+02 0.0038 24.3 5.2 19 396-414 96-114 (159)
315 2vof_A BCL-2-related protein A 25.6 27 0.00091 31.0 1.7 29 422-450 70-108 (157)
316 2p61_A Hypothetical protein TM 25.6 46 0.0016 30.3 3.3 19 428-446 79-97 (162)
317 1xwi_A SKD1 protein; VPS4B, AA 25.6 46 0.0016 31.6 3.4 49 403-451 180-234 (322)
318 2jjz_A Ionized calcium-binding 25.5 1.9E+02 0.0065 23.8 6.8 21 395-415 60-80 (150)
319 2kax_A Protein S100-A5; EF-han 25.3 1.5E+02 0.0051 22.7 5.7 35 397-431 23-59 (92)
320 1klp_A ACP, ACPM, meromycolate 25.2 9.5 0.00032 31.4 -1.2 24 451-474 38-61 (115)
321 2f05_A Paired amphipathic heli 25.1 62 0.0021 27.7 3.8 73 407-482 10-98 (105)
322 2gkm_A TRHBN, hemoglobin-like 25.1 1.4E+02 0.0049 25.1 6.1 80 425-507 22-106 (136)
323 1sxj_C Activator 1 40 kDa subu 25.0 77 0.0026 29.6 4.8 63 402-464 169-236 (340)
324 2lhi_A Calmodulin, serine/thre 24.9 1.6E+02 0.0054 25.1 6.4 72 394-466 20-112 (176)
325 2hpk_A Photoprotein berovin; s 24.9 1E+02 0.0035 26.0 5.1 20 395-414 46-65 (208)
326 2qrw_A Hemoglobin-like protein 24.8 1.1E+02 0.0037 25.4 5.2 79 425-506 12-102 (128)
327 1wdc_B Scallop myosin; calcium 24.7 2.6E+02 0.0088 22.1 7.5 21 395-415 28-48 (156)
328 3sdb_A Glutamine-dependent NAD 24.7 2E+02 0.007 30.8 8.5 111 399-518 506-641 (680)
329 2z15_A Protein TOB1; human TOB 24.6 13 0.00045 33.1 -0.5 35 434-474 69-104 (130)
330 3i83_A 2-dehydropantoate 2-red 24.5 30 0.001 32.6 1.9 32 433-465 215-246 (320)
331 3ox6_A Calcium-binding protein 24.5 1.1E+02 0.0038 23.6 4.9 62 404-465 87-152 (153)
332 1j1j_A Translin; testis/brain 24.5 1.4E+02 0.0047 28.4 6.4 100 398-512 122-222 (240)
333 1wdc_B Scallop myosin; calcium 24.2 86 0.0029 24.9 4.3 18 397-414 99-116 (156)
334 3cs1_A Flagellar calcium-bindi 24.2 1E+02 0.0036 26.7 5.2 35 395-430 58-93 (219)
335 2ffh_A Protein (FFH); SRP54, s 24.1 1.2E+02 0.0042 30.9 6.4 40 404-443 6-59 (425)
336 1dvp_A HRS, hepatocyte growth 24.1 1.6E+02 0.0055 26.9 6.7 37 400-438 80-116 (220)
337 3k21_A PFCDPK3, calcium-depend 24.1 1.4E+02 0.0049 25.2 5.9 15 450-464 175-189 (191)
338 2odi_A R.BCNI; endonuclease-DN 23.9 39 0.0013 32.8 2.6 72 449-528 29-119 (238)
339 2mys_B Myosin; muscle protein, 23.9 1.1E+02 0.0038 24.5 4.9 18 450-467 143-160 (166)
340 1squ_A CHEX protein; alpha-bet 23.9 1.6E+02 0.0054 24.7 6.1 44 399-442 57-103 (155)
341 3ldz_A STAM-1, signal transduc 23.8 1.2E+02 0.004 26.3 5.4 19 456-474 100-118 (140)
342 3i5g_B Myosin regulatory light 23.8 57 0.002 27.3 3.3 37 394-432 94-130 (153)
343 2y5i_A S100Z, S100 calcium bin 23.8 2E+02 0.0068 22.7 6.3 46 397-442 23-82 (99)
344 2ipc_A Preprotein translocase 23.5 50 0.0017 38.0 3.7 48 422-471 779-826 (997)
345 3dd4_A KV channel-interacting 23.2 2.1E+02 0.007 25.1 6.9 34 435-468 135-168 (229)
346 3i9v_4 NADH-quinone oxidoreduc 23.2 1.7E+02 0.0057 30.0 7.2 100 403-507 152-291 (409)
347 2hpk_A Photoprotein berovin; s 23.1 1.3E+02 0.0045 25.3 5.5 21 449-469 173-193 (208)
348 2bl0_B Myosin regulatory light 23.1 62 0.0021 25.0 3.2 21 447-467 121-141 (145)
349 2qac_A Myosin A tail domain in 23.1 1.4E+02 0.0049 23.3 5.4 20 395-414 94-113 (146)
350 2ksc_A Cyanoglobin; hemeprotei 23.0 1.3E+02 0.0045 24.8 5.4 80 425-507 10-98 (123)
351 1w5f_A Cell division protein F 22.8 67 0.0023 32.2 4.1 73 404-478 158-243 (353)
352 2ck3_A ATP synthase subunit al 22.8 48 0.0017 35.2 3.2 31 408-438 477-507 (510)
353 3qrx_A Centrin; calcium-bindin 22.8 1.1E+02 0.0038 24.4 4.7 18 449-466 148-165 (169)
354 1wzv_A Ubiquitin-conjugating e 22.7 1E+02 0.0035 26.8 4.9 45 406-450 109-153 (155)
355 2bec_A Calcineurin B homologou 22.6 99 0.0034 25.9 4.6 34 434-467 151-184 (202)
356 3jvo_A GP6; 13-membered ring, 22.5 1.1E+02 0.0037 25.9 4.8 40 400-442 7-46 (108)
357 1uhk_A Aequorin 2, aequorin; E 22.4 1.2E+02 0.0041 24.6 4.9 23 446-468 153-175 (191)
358 2vso_E Eukaryotic initiation f 22.4 1.4E+02 0.0046 28.4 6.0 24 404-428 37-60 (284)
359 2mys_B Myosin; muscle protein, 22.3 1.3E+02 0.0043 24.2 5.0 72 394-466 34-123 (166)
360 3lij_A Calcium/calmodulin depe 22.0 68 0.0023 31.5 3.9 26 440-465 428-453 (494)
361 2opo_A Polcalcin CHE A 3; calc 22.0 77 0.0026 23.0 3.4 20 396-415 22-41 (86)
362 4fgs_A Probable dehydrogenase 21.9 20 0.00068 34.3 0.1 72 396-468 51-135 (273)
363 3bhw_A Uncharacterized protein 21.9 2.1E+02 0.0074 26.4 7.1 69 404-475 57-142 (209)
364 3g2s_A C-terminal fragment of 21.9 1E+02 0.0036 27.3 4.8 35 403-437 89-126 (149)
365 1j55_A S-100P protein; metal b 21.8 1.6E+02 0.0054 22.9 5.3 42 400-441 26-80 (95)
366 2ig3_A Group III truncated hae 21.8 50 0.0017 28.4 2.6 81 425-507 8-98 (127)
367 2vzb_A Putative bacterioferrit 21.8 1.9E+02 0.0067 24.0 6.2 41 405-448 119-159 (170)
368 2amw_A Hypothetical protein NE 21.7 10 0.00035 29.0 -1.5 26 449-474 33-59 (83)
369 3iv7_A Alcohol dehydrogenase I 21.7 39 0.0013 33.5 2.1 60 404-469 292-351 (364)
370 3b0c_T CENP-T, centromere prot 21.5 1.6E+02 0.0053 25.2 5.6 44 424-467 33-88 (111)
371 1k2h_A S100A1, S-100 protein, 21.4 1.5E+02 0.0052 21.8 4.9 62 404-465 8-79 (93)
372 1k8u_A S100A6, calcyclin, CACY 21.4 1.6E+02 0.0053 21.4 5.0 17 397-413 23-40 (90)
373 1ny5_A Transcriptional regulat 21.4 1.5E+02 0.0051 29.0 6.1 46 418-466 337-386 (387)
374 3pev_B Nucleoporin GLE1; RECA, 21.4 5.3E+02 0.018 25.4 10.1 86 421-510 79-191 (297)
375 3hd5_A Thiol:disulfide interch 21.4 1.6E+02 0.0055 25.0 5.7 48 398-451 101-148 (195)
376 1vku_A Acyl carrier protein; T 21.2 10 0.00035 31.2 -1.7 25 450-474 46-70 (100)
377 5pal_A Parvalbumin; calcium-bi 21.1 1E+02 0.0034 23.4 4.0 15 450-464 92-106 (109)
378 1fpw_A Yeast frequenin, calciu 21.1 2.3E+02 0.008 23.0 6.5 17 450-466 111-127 (190)
379 3nnr_A Transcriptional regulat 21.1 17 0.00059 30.8 -0.4 17 421-437 109-125 (228)
380 2l9f_A CALE8, meacp; transfera 21.1 34 0.0012 29.5 1.4 30 450-480 44-73 (102)
381 2ccm_A Calexcitin; EF hand, ca 20.9 3.3E+02 0.011 22.2 7.4 20 395-414 23-42 (191)
382 3zwh_A Protein S100-A4; Ca-bin 20.9 2.8E+02 0.0095 22.5 6.8 42 400-441 30-84 (104)
383 4aq3_A Apoptosis regulator BCL 20.6 1.1E+02 0.0037 27.8 4.6 44 404-450 71-123 (169)
384 4eoz_A Speckle-type POZ protei 20.6 64 0.0022 26.1 2.9 47 402-448 72-119 (145)
385 1k9u_A Polcalcin PHL P 7; poll 20.5 97 0.0033 22.1 3.6 63 404-467 2-67 (78)
386 1dtl_A Cardiac troponin C; hel 20.5 1.7E+02 0.006 22.9 5.4 20 396-415 29-49 (161)
387 3aq9_A Group 1 truncated hemog 20.5 1.4E+02 0.0048 24.4 5.0 80 425-507 14-98 (121)
388 3n5w_A Nitric oxide synthase; 20.5 1.3E+02 0.0043 31.8 5.7 18 424-441 54-71 (422)
389 1or5_A Acyl carrier protein; A 20.4 36 0.0012 25.7 1.3 24 451-474 37-60 (83)
390 2r9v_A ATP synthase subunit al 20.4 47 0.0016 35.4 2.5 31 408-438 482-512 (515)
391 1tiz_A Calmodulin-related prot 20.4 1.2E+02 0.004 20.6 3.9 21 395-415 11-31 (67)
392 3hn2_A 2-dehydropantoate 2-red 20.4 36 0.0012 31.9 1.6 34 432-466 213-248 (312)
393 1c7v_A CAVP, calcium vector pr 20.2 58 0.002 23.4 2.3 21 395-415 18-38 (81)
394 2ggz_A Guanylyl cyclase-activa 20.1 1E+02 0.0035 26.4 4.2 31 439-469 94-124 (211)
395 1s6c_A KV4 potassium channel-i 20.1 2.2E+02 0.0075 23.1 6.1 32 437-468 91-122 (183)
396 4dll_A 2-hydroxy-3-oxopropiona 20.1 1.2E+02 0.0041 28.6 5.0 50 404-454 173-227 (320)
No 1
>1h3o_B Transcription initiation factor TFIID 20/15 kDa subunits; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=100.00 E-value=3.1e-33 Score=229.30 Aligned_cols=75 Identities=53% Similarity=0.960 Sum_probs=73.1
Q ss_pred CCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCccc
Q 009666 398 GNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTL 472 (529)
Q Consensus 398 ~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~I 472 (529)
+++||+|++|++||++|||++.||+||||+|++|||||||+|+++||+||||||+++||+|||+|||||+|||+|
T Consensus 2 s~~vl~k~~L~~Lv~~idp~~~ld~~vee~ll~lADdFV~~V~~~ac~lAKhR~s~~le~kDvql~Ler~wni~i 76 (76)
T 1h3o_B 2 SHMVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWI 76 (76)
T ss_dssp -CCSSCHHHHHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECHHHHHHHHHHHTCCCC
T ss_pred CcccccHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccHHHHHHHHHhhcCCcC
Confidence 578999999999999999999999999999999999999999999999999999999999999999999999987
No 2
>2hue_C Histone H4; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Xenopus laevis} SCOP: a.22.1.1 PDB: 3nqj_B 1aoi_B 3kwq_B* 1hio_D 2yfv_B
Probab=98.98 E-value=8.5e-10 Score=90.46 Aligned_cols=78 Identities=23% Similarity=0.289 Sum_probs=72.8
Q ss_pred cCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCCCC
Q 009666 397 FGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFS 476 (529)
Q Consensus 397 ~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFs 476 (529)
+..+.|+|..+..|++..+. ..|.+|+.|.|.++.++|+++|+..|..+|+|.|-.||+..||.+.|+|. |..+.||+
T Consensus 6 ~~~~~ip~~~I~Riar~~Gv-~rIs~da~~~l~~~l~~~~~~I~~dA~~~a~ha~RKTvt~~DV~~Alk~~-g~~lYgf~ 83 (84)
T 2hue_C 6 DNIQGITKPAIRRLARRGGV-KRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQ-GRTLYGFG 83 (84)
T ss_dssp GGCCSSCHHHHHHHHHHTTC-CEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTTT-CEEEESCC
T ss_pred ccCCCCCHHHHHHHHHHcCc-hhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcHHHHHHHHHHc-CCCCCCCC
Confidence 45667999999999999854 88999999999999999999999999999999999999999999999998 78898996
No 3
>1id3_B Histone H4; nucleosome core particle, chromatin, protein/DNA interaction, nucleoprotein, supercoiled DNA; 3.10A {Saccharomyces cerevisiae} SCOP: a.22.1.1
Probab=98.93 E-value=1.8e-09 Score=91.95 Aligned_cols=79 Identities=23% Similarity=0.313 Sum_probs=72.5
Q ss_pred CcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCCC
Q 009666 396 EFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGF 475 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGF 475 (529)
.+..+.|+|..|..|++... -..|.+|+.|.|.+++++|+++|+..|..+|+|-+-.||+..||.+.|+|. +..+.||
T Consensus 23 r~~i~~ip~~~I~Rlar~~G-v~rIS~da~~~l~~~le~fi~~I~~dA~~~a~HakRKTVt~~DV~~ALkr~-g~~lYGf 100 (102)
T 1id3_B 23 RDNIQGITKPAIRRLARRGG-VKRISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVTSLDVVYALKRQ-GRTLYGF 100 (102)
T ss_dssp -CCGGGSCHHHHHHHHHHTT-CCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHT-TCCEESS
T ss_pred HhccCCCCHHHHHHHHHHcC-chhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcHHHHHHHHHHc-CCCCCCC
Confidence 35566799999999999985 488999999999999999999999999999999999999999999999998 6788898
Q ss_pred C
Q 009666 476 S 476 (529)
Q Consensus 476 s 476 (529)
.
T Consensus 101 ~ 101 (102)
T 1id3_B 101 G 101 (102)
T ss_dssp C
T ss_pred C
Confidence 5
No 4
>1tzy_D Histone H4-VI; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1f66_B 1eqz_D 1hq3_D 1u35_B 2aro_D 2cv5_B* 2f8n_B 3nqu_B 3r45_B 3azg_B 3a6n_B 3an2_B 3av1_B 3av2_B 3ayw_B 3aze_B 3azf_B 3afa_B 3azh_B 3azk_B ...
Probab=98.86 E-value=4e-09 Score=89.33 Aligned_cols=79 Identities=23% Similarity=0.287 Sum_probs=72.6
Q ss_pred CcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCCC
Q 009666 396 EFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGF 475 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGF 475 (529)
.+..+.|++..|..|++.... ..|.+|+.|.|.++.++|+++|+..|..+|+|-|-.||+.+||.+.|++. +..+.||
T Consensus 24 r~~~~gip~~~I~Rlar~~G~-~rIs~~a~~~l~~vle~~~~~V~~dA~~~a~hakRktIt~~DV~~Alr~~-g~~lYGf 101 (103)
T 1tzy_D 24 RDNIQGITKPAIRRLARRGGV-KRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQ-GRTLYGF 101 (103)
T ss_dssp CCGGGGSCHHHHHHHHHHTTC-CEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHT-TCEEESC
T ss_pred hhhcccCCHHHHHHHHHHcCc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHHc-CCCCcCC
Confidence 344555999999999999976 79999999999999999999999999999999999999999999999998 6788898
Q ss_pred C
Q 009666 476 S 476 (529)
Q Consensus 476 s 476 (529)
+
T Consensus 102 ~ 102 (103)
T 1tzy_D 102 G 102 (103)
T ss_dssp C
T ss_pred C
Confidence 5
No 5
>2yfw_B Histone H4, H4; cell cycle, kinetochore, centromere, histone chaperone, BUDD; 2.60A {Kluyveromyces lactis nrrl y-1140}
Probab=98.83 E-value=5.3e-09 Score=88.70 Aligned_cols=78 Identities=23% Similarity=0.321 Sum_probs=63.9
Q ss_pred cCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCCCC
Q 009666 397 FGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFS 476 (529)
Q Consensus 397 ~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFs 476 (529)
+..+.|++..|..|++.... ..|.+|+.|.|.++.++|+++|+..|..+|+|-|-.||+.+||.+.|++. |..+.||.
T Consensus 25 ~~~~gip~~~I~Rlar~~G~-~rIs~~a~~~l~~vle~~~~~V~~dA~~~a~hakRktvt~~DV~~Alr~~-g~~lYGf~ 102 (103)
T 2yfw_B 25 DNIQGITKPAIRRLARRGGV-KRISGLIYEEVRNVLKTFLESVIRDAVTYTEHAKRKTVTSLDVVYALKRQ-GRTLYGFG 102 (103)
T ss_dssp -----CCHHHHHHHHHHTTC-CEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHH-C-------
T ss_pred hhhccCCHHHHHHHHHHcCc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcHHHHHHHHHHc-CCCCcCCC
Confidence 44455999999999999876 79999999999999999999999999999999999999999999999998 57788885
No 6
>1ku5_A HPHA, archaeal histon; histone fold, DNA binding protein; 2.30A {Pyrococcus horikoshii} SCOP: a.22.1.2
Probab=98.73 E-value=2.3e-08 Score=78.81 Aligned_cols=64 Identities=19% Similarity=0.368 Sum_probs=61.1
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
.|+|..+..|++++ +..++++++.+.|.+++++|+++|+..|..+|+|.|..||+.+||++.++
T Consensus 6 ~lp~a~v~Rl~r~~-g~~ris~~a~~~l~e~~~~~~~~v~~dA~~~a~hakRkTI~~~DV~lA~~ 69 (70)
T 1ku5_A 6 ELPIAPVDRLIRKA-GAERVSEQAAKVLAEYLEEYAIEIAKKAVEFARHAGRKTVKVEDIKLAIK 69 (70)
T ss_dssp CSCHHHHHHHHHHT-TCSEECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHT
T ss_pred cCChHHHHHHHHHc-CcceeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHH
Confidence 58999999999998 46899999999999999999999999999999999999999999999986
No 7
>1b67_A Protein (histone HMFA); DNA binding protein; 1.48A {Methanothermus fervidus} SCOP: a.22.1.2 PDB: 1hta_A 1a7w_A 1b6w_A 1bfm_A
Probab=98.62 E-value=8.4e-08 Score=74.82 Aligned_cols=65 Identities=26% Similarity=0.322 Sum_probs=61.9
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
-|.|..+..||+++ +...+..|+.++|.+.+++||..+++.|..+|+|.|..||..+||++.+++
T Consensus 2 ~lP~a~v~Ri~k~~-~~~ris~~A~~~l~~a~e~fi~~l~~~A~~~a~~~kRkTI~~~Di~~A~~~ 66 (68)
T 1b67_A 2 ELPIAPIGRIIKNA-GAERVSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKTIKAEDIELARKM 66 (68)
T ss_dssp CSCHHHHHHHHHHT-TCSEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHGGG
T ss_pred CCCccHHHHHHhcC-CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHh
Confidence 37899999999999 678999999999999999999999999999999999999999999999986
No 8
>3b0c_W CENP-W, centromere protein W; histone fold, DNA binding, DNA binding protein; HET: CIT; 2.20A {Gallus gallus} PDB: 3b0d_W* 3vh5_W 3vh6_W
Probab=98.60 E-value=7.7e-08 Score=77.32 Aligned_cols=71 Identities=13% Similarity=0.191 Sum_probs=65.2
Q ss_pred CCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhcc
Q 009666 398 GNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (529)
Q Consensus 398 ~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (529)
|.+.|.+..+..+++++.|+..|..|+.++|.+.+++||+.|...|..+|+|.|..||..+||+..+|.-+
T Consensus 1 g~~~LP~A~V~rI~K~~~p~~~is~~A~~~i~~~~~~Fi~~la~eA~~~a~~~~rKTI~~~dI~~A~~~ll 71 (76)
T 3b0c_W 1 GRRTVPRGTLRKIIKKHKPHLRLAANTDLLVHLSFLLFLHRLAEEARTNAFENKSKIIKPEHTIAAAKVIL 71 (76)
T ss_dssp ---CCCHHHHHHHHHHHCTTCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHHHH
T ss_pred CCCcccccHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999999999999999998754
No 9
>3b0c_T CENP-T, centromere protein T; histone fold, DNA binding, DNA binding protein; HET: CIT; 2.20A {Gallus gallus} PDB: 3b0d_T* 3vh5_T 3vh6_T
Probab=98.58 E-value=8.6e-08 Score=82.71 Aligned_cols=72 Identities=15% Similarity=0.201 Sum_probs=63.3
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcc
Q 009666 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMT 471 (529)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~ 471 (529)
...|+|..|..|+++. ...+|.+|+.+.|.+++++|+++|+..|..+|+|.|..||+..||.+.|+|+-.+.
T Consensus 5 d~~lP~a~I~Ri~r~~-g~~rIS~~a~~~l~e~l~~f~~~v~~da~~~A~HA~RKTV~~eDV~lalrr~g~~~ 76 (111)
T 3b0c_T 5 EPEIASSLIKQIFSHY-VKTPVTRDAYKIVEKCSERYFKQISSDLEAYSQHAGRKTVEMADVELLMRRQGLVT 76 (111)
T ss_dssp -----CHHHHHHHHHH-HCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHTTSSB
T ss_pred CCCCCHHHHHHHHHHC-CCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHHCCCcc
Confidence 4568999999999998 67899999999999999999999999999999999999999999999999985443
No 10
>1taf_A TFIID TBP associated factor 42; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=98.44 E-value=6.4e-07 Score=72.23 Aligned_cols=63 Identities=19% Similarity=0.331 Sum_probs=57.4
Q ss_pred HHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhcc
Q 009666 405 RSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (529)
Q Consensus 405 rKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (529)
+.|..|++..+. +.++++|...|+|++.+|+.+|+..|..+|+|.|.++|++.||+|.++...
T Consensus 5 ~~i~~iLk~~G~-~~~~~~v~~~L~e~~~ry~~~il~dA~~~a~HAgrktv~~eDVkLAi~~~~ 67 (68)
T 1taf_A 5 QVIMSILKELNV-QEYEPRVVNQLLEFTFRYVTSILDDAKVYANHARKKTIDLDDVRLATEVTL 67 (68)
T ss_dssp HHHHHHHHHTTC-CCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCC-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHhcc
Confidence 457788888755 799999999999999999999999999999999999999999999998753
No 11
>1n1j_A NF-YB; histone-like PAIR, DNA binding protein; 1.67A {Homo sapiens} SCOP: a.22.1.3
Probab=98.36 E-value=1.2e-06 Score=72.28 Aligned_cols=70 Identities=14% Similarity=0.263 Sum_probs=63.6
Q ss_pred cCCccCCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 397 FGNRILTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 397 ~~nrILtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
+.+..|.+..+..|++++. ....+..|+.++|.+.+++||..++..|...|+|.|..||..+||...|++
T Consensus 4 ~~d~~LP~a~i~ri~K~~~~~~~~is~dA~~~l~~a~e~Fi~~l~~~A~~~a~~~kRkTI~~~Dv~~Al~~ 74 (93)
T 1n1j_A 4 EQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMST 74 (93)
T ss_dssp ---CCCCHHHHHHHHHHTSCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHH
T ss_pred cccccCChhHHHHHHHHhCCccceeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHH
Confidence 3566899999999999994 468999999999999999999999999999999999999999999999983
No 12
>1f1e_A Histone fold protein; archaeal histone protein, DNA binding protein; HET: MSE; 1.37A {Methanopyrus kandleri} SCOP: a.22.1.2
Probab=98.36 E-value=1e-06 Score=80.37 Aligned_cols=73 Identities=11% Similarity=0.249 Sum_probs=68.3
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhcc
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (529)
.+.++..|++..+..|+|+. ...++..|+.+.|.+++++|++.|+..|+.+|+|-|..||..+||++.|+++.
T Consensus 76 ~d~~~l~lP~a~V~Ri~k~~-g~~RVS~~A~~~l~~~le~f~~~I~~~A~~~a~ha~RKTIt~eDV~~Al~~~~ 148 (154)
T 1f1e_A 76 EDYDGELFGRATVRRILKRA-GIERASSDAVDLYNKLICRATEELGEKAAEYADEDGRKTVQGEDVEKAITYSM 148 (154)
T ss_dssp TTCCSCCCCHHHHHHHHHHT-TCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHS
T ss_pred CccccccCCccHHHHHHHHc-CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHhcC
Confidence 34566789999999999998 77899999999999999999999999999999999999999999999999974
No 13
>2ly8_A Budding yeast chaperone SCM3; centromere protein, CENH3 variants, partially unfolded; NMR {Saccharomyces cerevisiae}
Probab=98.33 E-value=7.2e-07 Score=78.94 Aligned_cols=62 Identities=26% Similarity=0.405 Sum_probs=57.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCCCCc
Q 009666 415 DPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSG 477 (529)
Q Consensus 415 DPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFss 477 (529)
.+-++|.+|+.|.|.++.++|+++|+..|+.+|+|.|.+||.+.||.+.|+|. |..+-||++
T Consensus 60 gGvkRIS~~iy~e~r~vl~~~l~~i~rdav~yaehA~RKTVta~DV~~Alkr~-G~~lygf~~ 121 (121)
T 2ly8_A 60 RGSKRISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVTSLDVVYALKRQ-GRTLYGFGG 121 (121)
T ss_dssp CCSSCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCHHHHHHHHHHT-TCGGGGCCC
T ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcHHHHHHHHHhC-CCcCCCCCC
Confidence 34578999999999999999999999999999999999999999999999996 779999974
No 14
>2l5a_A Histone H3-like centromeric protein CSE4, protein histone H4; A single chain of CSE4+SCM3+H4, fusion protein; NMR {Saccharomyces cerevisiae}
Probab=98.21 E-value=3.7e-06 Score=81.40 Aligned_cols=77 Identities=22% Similarity=0.398 Sum_probs=68.1
Q ss_pred CccCCHHHHHHHHHhhC--------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCc
Q 009666 399 NRILTKRSIQELVNQID--------PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNM 470 (529)
Q Consensus 399 nrILtKrKLqELVrqID--------PsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI 470 (529)
+..=-++.|.|++. |+ +-+.|.+++.|.|.++.++|+++|+..|+.+|+|.+..||++.||.+.|+|. |.
T Consensus 151 ~~~r~~~vLrD~i~-i~~~RlaRrgGVkRIS~~iyeelr~vLe~fle~IirdAv~yaeHA~RKTVta~DV~~ALKr~-gr 228 (235)
T 2l5a_A 151 KRTKYTSVLRDIID-ISDEEDGDKGGVKRISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVTSLDVVYALKRQ-GR 228 (235)
T ss_dssp CSSTHHHHHHHHHH-HTCCTTSCCTTCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHH-HH
T ss_pred cchhHHHHHHHhhc-ccHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcHHHHHHHHHhc-CC
Confidence 33344778888887 75 5679999999999999999999999999999999999999999999999997 58
Q ss_pred ccCCCCc
Q 009666 471 TLPGFSG 477 (529)
Q Consensus 471 ~IPGFss 477 (529)
.+.||+.
T Consensus 229 ~lYGf~~ 235 (235)
T 2l5a_A 229 TLYGFGG 235 (235)
T ss_dssp HHTTCCC
T ss_pred ccccCCC
Confidence 8889863
No 15
>3nqj_A Histone H3-like centromeric protein A; alpha helix, histone fold, centromere, DNA binding protein; 2.10A {Homo sapiens}
Probab=98.16 E-value=4.5e-06 Score=69.58 Aligned_cols=65 Identities=20% Similarity=0.147 Sum_probs=60.8
Q ss_pred cCCHHHHHHHHHhhC------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 401 ILTKRSIQELVNQID------PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 401 ILtKrKLqELVrqID------PsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
+|.|--++.||++|. ....+..++.++|.+.+|+|+.++.+.+...|+|.|--||..|||+|...
T Consensus 3 LI~klPF~RLVREI~~~~~~~~~~R~q~~Al~aLQea~E~ylv~Lfeda~lcAiHAkRvTi~~kDiqLa~r 73 (82)
T 3nqj_A 3 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQLARR 73 (82)
T ss_dssp SSCHHHHHHHHHHHHHHHHSSCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHH
T ss_pred CcccccHHHHHHHHHHHhccCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCcHHHHHHHHH
Confidence 678999999999997 46899999999999999999999999999999999999999999999754
No 16
>1jfi_B DR1 protein, transcription regulator NC2 beta chain; histone, H2A/H2B, tata-DNA, transcription initiation, NC2, negative cofactor, structural genomics, PSI; 2.62A {Homo sapiens} SCOP: a.22.1.3
Probab=98.15 E-value=5.2e-06 Score=77.47 Aligned_cols=72 Identities=14% Similarity=0.353 Sum_probs=66.6
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
.++....|.+..|..||+++-|+.+|.+|+.++|.+.+.+||.-|...|..+|+|.|..||..+||...|++
T Consensus 9 ~~~eD~~LP~A~V~RImK~alp~~rISkDA~~al~ec~~eFI~~LtseA~e~a~~~~RKTI~~eDVl~Al~~ 80 (179)
T 1jfi_B 9 GNDDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALES 80 (179)
T ss_dssp ---CCCCCCHHHHHHHHHHHSTTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHH
T ss_pred CchhhhhcCHHHHHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHh
Confidence 566778999999999999997789999999999999999999999999999999999999999999999995
No 17
>2hue_B Histone H3; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Xenopus laevis}
Probab=98.11 E-value=7.2e-06 Score=67.61 Aligned_cols=66 Identities=23% Similarity=0.222 Sum_probs=60.9
Q ss_pred cCCHHHHHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 401 ILTKRSIQELVNQID----PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 401 ILtKrKLqELVrqID----PsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
+|.|--++.||++|. ....+..++.+.|.+.+|+|+..+.+.+..+|+|.|.-||..|||+|...-
T Consensus 3 li~k~PF~RLVRei~~~~~~~~R~q~~Al~aLQea~Eaylv~lfeda~l~A~HAkRvTi~~kDiqLa~ri 72 (77)
T 2hue_B 3 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRI 72 (77)
T ss_dssp CSCHHHHHHHHHHHHHTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHcCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCcHhhHHHHHHH
Confidence 678999999999992 468999999999999999999999999999999999999999999998743
No 18
>3r45_A Histone H3-like centromeric protein A; histone fold, centromere, CENP-A, histone chaperone, hjurp; 2.60A {Homo sapiens}
Probab=98.10 E-value=3.7e-06 Score=77.32 Aligned_cols=70 Identities=19% Similarity=0.119 Sum_probs=62.5
Q ss_pred CcCCccCCHHHHHHHHHhhC------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 396 EFGNRILTKRSIQELVNQID------PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqID------PsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
.+.+-+|.|--++.||++|. .+..+..++.++|.|.+|+|+.++.+.+..+|+|.|--||..|||+|+..
T Consensus 72 kSteLLIpKlPF~RLVREIa~~~~~~~~lRfqs~Al~ALQEAaEayLV~LFEdanLcAiHAkRVTIm~kDIqLArr 147 (156)
T 3r45_A 72 KSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQLARR 147 (156)
T ss_dssp ---CCCSCHHHHHHHHHHHHHTTTTTCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEECHHHHHHHHH
T ss_pred cccccccccccHHHHHHHHHHHhccCccceecHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHHHHHHH
Confidence 46778899999999999996 35688999999999999999999999999999999999999999999753
No 19
>3nqu_A Histone H3-like centromeric protein A; alpha helix, histone fold, centromere, DNA binding protein; 2.50A {Homo sapiens} PDB: 3an2_A
Probab=98.07 E-value=5.2e-06 Score=75.16 Aligned_cols=70 Identities=19% Similarity=0.119 Sum_probs=63.1
Q ss_pred CcCCccCCHHHHHHHHHhhC------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 396 EFGNRILTKRSIQELVNQID------PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqID------PsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
.+.+-+|.|--++.||++|. .+..+..++.++|.|.+|+|+.++.+.+..+|+|.|--||..|||+|+..
T Consensus 56 kst~LLIpKlPF~RLVREI~~~~~~~~~~Rfq~~Al~ALQEAaEayLv~LFEdanlcAiHAkRVTIm~kDiqLArr 131 (140)
T 3nqu_A 56 KSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQLARR 131 (140)
T ss_dssp ---CCCSCTTHHHHHHHHHHHHHHTTCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHH
T ss_pred cccccccccccHHHHHHHHHHHhcccccceecHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHHHHHHH
Confidence 46778899999999999996 46899999999999999999999999999999999999999999999754
No 20
>2yfv_A Histone H3-like centromeric protein CSE4; cell cycle, kinetochore, centromere, histone chaperone, BUDD; 2.32A {Kluyveromyces lactis nrrl y-1140} PDB: 2yfw_A
Probab=98.04 E-value=6.8e-06 Score=70.53 Aligned_cols=70 Identities=17% Similarity=0.193 Sum_probs=59.5
Q ss_pred CcCCccCCHHHHHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 396 EFGNRILTKRSIQELVNQIDP-------SERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqIDP-------sesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
.+.+-+|.|--+..||++|.- ...+..++.++|.+.+|+|+..+.+.+..+|+|.|--||..|||+|...
T Consensus 22 kst~llIpk~PF~RLVREI~~~~~~~~~~~R~q~~Al~ALQeaaEayLv~Lfeda~l~A~HAkRvTi~~kDiqLa~r 98 (100)
T 2yfv_A 22 RSTDLLISRMPFARLVKEVTDQFTTESEPLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMRKDMQLARR 98 (100)
T ss_dssp ------CCHHHHHHHHHHHHHTTC-----CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHH
T ss_pred ccchhhhccccHHHHHHHHHHHhccccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCHHHHHHHHH
Confidence 356778999999999999962 5789999999999999999999999999999999999999999999863
No 21
>1tzy_C Histone H3; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1eqz_C 1hq3_C 2aro_C 2f8n_A 2hio_C 3av1_A 3lel_A 3afa_A 3azi_A 3azj_A 3azk_A 3azl_A 3azm_A 3azn_A 2cv5_A* 1u35_A* 2nqb_A 2io5_B 2pyo_A* 3c9k_C ...
Probab=98.03 E-value=1.2e-05 Score=72.43 Aligned_cols=71 Identities=21% Similarity=0.185 Sum_probs=65.2
Q ss_pred CcCCccCCHHHHHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 396 EFGNRILTKRSIQELVNQID----PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqID----PsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
.+.+-+|.|--++.||++|. .+..+..++.++|.|.+|+|+..+.+.+..+|+|.|--||..|||+|...-
T Consensus 57 kst~lLIpk~PF~RLVREI~~~~~~~~R~q~~Al~aLQeaaEayLv~Lfeda~l~A~HAkRvTi~~kDiqLa~ri 131 (136)
T 1tzy_C 57 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 131 (136)
T ss_dssp HCCSCCSCHHHHHHHHHHHHHHHCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHH
T ss_pred cchhhhhccchHHHHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCcHHhHHHHHHH
Confidence 35778999999999999992 468999999999999999999999999999999999999999999998743
No 22
>3b0b_B CENP-S, centromere protein S; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus}
Probab=98.00 E-value=5.4e-06 Score=71.89 Aligned_cols=61 Identities=15% Similarity=0.148 Sum_probs=54.2
Q ss_pred HHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 407 IQELVNQIDP--SERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 407 LqELVrqIDP--sesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+..+++++.. +..+.++|...|.+++.+|+++|...+..+|||.|.+||+..||.|.++||
T Consensus 25 V~rI~~~~g~~~~~~vs~~~i~aL~E~~~~~~~~ia~Da~~fA~HAgRkTI~~eDV~La~Rrn 87 (107)
T 3b0b_B 25 TGCLCQDVAEDKGVLFSKQTVAAISEITFRQCENFARDLEMFARHAKRSTITSEDVKLLARRS 87 (107)
T ss_dssp HHHHHHHHHHHHTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTTC
T ss_pred HHHHHHHHhhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCcCCHHHHHHHHHhC
Confidence 3455555533 578999999999999999999999999999999999999999999999996
No 23
>1taf_B TFIID TBP associated factor 62; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=97.98 E-value=3.2e-05 Score=62.76 Aligned_cols=66 Identities=18% Similarity=0.240 Sum_probs=62.0
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
+-+|++..+.++++.++- +.|.+|+.+.|.+-++..+..|+..|+++++|-|..+|...||.+.|+
T Consensus 4 ~s~lp~~~v~~iaes~Gi-~~lsddaa~~LA~dvEyr~~eI~qeA~kfmrHakRk~Lt~~DI~~Alk 69 (70)
T 1taf_B 4 GSSISAESMKVIAESIGV-GSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSLK 69 (70)
T ss_dssp SCCCCHHHHHHHHHHTTC-CCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHC
T ss_pred cccCCHHHHHHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecHHHHHHHHc
Confidence 457899999999999965 799999999999999999999999999999999999999999999885
No 24
>3v9r_A MHF1, uncharacterized protein YOL086W-A; histone fold, fanconi anemia, DNA repair, DNA BI protein; 2.40A {Saccharomyces cerevisiae}
Probab=97.94 E-value=2.1e-05 Score=66.50 Aligned_cols=61 Identities=15% Similarity=0.194 Sum_probs=54.1
Q ss_pred HHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhcc
Q 009666 408 QELVNQIDP--SERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (529)
Q Consensus 408 qELVrqIDP--sesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (529)
..++.++.. +..+++++...|.+++.+|+++|...+..+|||-|.+||+..||.|.++||=
T Consensus 19 ~ki~~e~~~~~g~~vs~~~i~aL~e~~~~~~~~ia~Dl~~fA~HAgRkTI~~eDV~L~~Rrn~ 81 (90)
T 3v9r_A 19 EERLQQVLSSEDIKYTPRFINSLLELAYLQLGEMGSDLQAFARHAGRGVVNKSDLMLYLRKQP 81 (90)
T ss_dssp HHHHHHHSCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTTCH
T ss_pred HHHHHHHHHhcCceeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHhCh
Confidence 355666633 3679999999999999999999999999999999999999999999999973
No 25
>1f1e_A Histone fold protein; archaeal histone protein, DNA binding protein; HET: MSE; 1.37A {Methanopyrus kandleri} SCOP: a.22.1.2
Probab=97.85 E-value=3.6e-05 Score=70.22 Aligned_cols=66 Identities=20% Similarity=0.206 Sum_probs=62.2
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
.|.+-.+..|+|+.=+..++..|+.|.|.+++.+|+..|+..|..+|+|.|..||..+||...|.+
T Consensus 4 ~LP~a~V~Riik~~lg~~rVS~dA~~~l~~~l~~f~~~i~~~A~~~a~ha~RKTv~a~DV~~a~~~ 69 (154)
T 1f1e_A 4 ELPKAAIERIFRQGIGERRLSQDAKDTIYDFVPTMAEYVANAAKSVLDASGKKTLMEEHLKALADV 69 (154)
T ss_dssp CCCHHHHHHHHHTTSTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHHH
T ss_pred cCCccHHHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHh
Confidence 478999999999984559999999999999999999999999999999999999999999999976
No 26
>2byk_B Chrac-14; nucleosome sliding, histone fold, DNA-binding protein; 2.4A {Drosophila melanogaster} SCOP: a.22.1.3 PDB: 2bym_B
Probab=97.81 E-value=4.1e-05 Score=67.52 Aligned_cols=71 Identities=24% Similarity=0.288 Sum_probs=62.2
Q ss_pred cCCccCCHHHHHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 397 FGNRILTKRSIQELVNQIDP-SERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 397 ~~nrILtKrKLqELVrqIDP-sesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
.....|.+..|..|+++++| ...|..|+.++|.+.++.||..|+..|..+|+|.+..||..+||...|++.
T Consensus 5 ~~d~~LP~A~I~rImK~~~pd~~~iS~dA~~~l~ka~e~FI~~lt~~A~~~a~~~kRKTI~~~Dv~~Al~~l 76 (128)
T 2byk_B 5 IEDLNLPNAVIGRLIKEALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHKTITAKDILQTLTEL 76 (128)
T ss_dssp ------CCSHHHHHHHHHSCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHT
T ss_pred cccccCCHHHHHHHHHHhCcccceECHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHc
Confidence 45678899999999998776 679999999999999999999999999999999999999999999999985
No 27
>4dra_A Centromere protein S; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_A
Probab=97.79 E-value=2.7e-05 Score=68.44 Aligned_cols=60 Identities=13% Similarity=0.154 Sum_probs=52.9
Q ss_pred HHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhcc
Q 009666 409 ELVNQID--PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (529)
Q Consensus 409 ELVrqID--PsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (529)
.+|++.. -+..+++++...|.+++++|+++|...+..+|||-|.+||+..||.|.++||=
T Consensus 35 rIvke~gaer~~~vS~~ai~aL~El~~~~~~~ia~Dl~~fAkHAgRkTI~~eDV~La~Rr~~ 96 (113)
T 4dra_A 35 CLCEEVALDKEMQFSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKLLARRSN 96 (113)
T ss_dssp HHHHHHHHHHTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTTCH
T ss_pred HHHHHHHHHcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHhCH
Confidence 3444442 25679999999999999999999999999999999999999999999999973
No 28
>1n1j_B NF-YC; histone-like PAIR, DNA binding protein; 1.67A {Homo sapiens} SCOP: a.22.1.3
Probab=97.64 E-value=0.00012 Score=61.27 Aligned_cols=77 Identities=14% Similarity=0.236 Sum_probs=64.3
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcc
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMT 471 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~ 471 (529)
.+..+..|.-.++..+++.-.....+..|+-.+|.+.++.||..+++.|+..|++.|..||..+||...+++...+.
T Consensus 13 ~~~~~~~lP~arIkrImK~~~~~~~is~eA~~~laka~E~Fi~~l~~~A~~~a~~~krktI~~~di~~Av~~~e~~~ 89 (97)
T 1n1j_B 13 KDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFD 89 (97)
T ss_dssp -------CCHHHHHHHHTTSTTCCCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHTTCGGGG
T ss_pred CCcCCCcCCHHHHHHHHccCccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCHHHHHHHHhcCcHHH
Confidence 45567788999999999975444789999999999999999999999999999999999999999999999876655
No 29
>3vh5_A CENP-S; histone fold, chromosome segregation, DNA binding, nucleus, binding protein; 2.40A {Gallus gallus} PDB: 3vh6_A
Probab=97.54 E-value=9.4e-05 Score=67.13 Aligned_cols=54 Identities=15% Similarity=0.127 Sum_probs=50.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccC
Q 009666 416 PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWN 469 (529)
Q Consensus 416 PsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWN 469 (529)
.+..+++++...|.+++++|+++|...+..+|||-|..||+..||.|.++||=.
T Consensus 36 ~~~~vS~~ai~aL~El~~~~~e~ia~DLe~FAkHAGRKTI~~eDVkLa~Rrn~~ 89 (140)
T 3vh5_A 36 KGVLFSKQTVAAISEITFRQAENFARDLEMFARHAKRSTITSEDVKLLARRSNS 89 (140)
T ss_dssp HTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHTTSHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHhCHH
Confidence 357899999999999999999999999999999999999999999999999744
No 30
>2nqb_D Histone H2B; nucleosome, NCP, chromatin, structural protein/DNA complex; 2.30A {Drosophila melanogaster} PDB: 2pyo_D*
Probab=97.52 E-value=0.00016 Score=64.48 Aligned_cols=63 Identities=19% Similarity=0.287 Sum_probs=59.5
Q ss_pred HHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 405 RSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 405 rKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
.-|..+|++|.++..|..++.++|-.+++|+.|.|...|++||+|.|..||..+||+...+-.
T Consensus 37 ~YIyKVLKQVhpd~gISskAm~ImnSfvnDiferIA~EAs~La~~nkr~TitsreIqtAvrLl 99 (123)
T 2nqb_D 37 IYIYTVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLL 99 (123)
T ss_dssp HHHHHHHHHHCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCHHHHHHHHHHh
Confidence 458999999999999999999999999999999999999999999999999999999988754
No 31
>1tzy_B Histone H2B; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1eqz_B 1hq3_B 2aro_B 2hio_B 3c9k_B 3azg_D 3a6n_D 3an2_D 3av1_D 3av2_D 3ayw_D 3aze_D 3azf_D 3afa_D 3azh_D 3azi_D 3azj_D 3azk_D 3azl_D 3azm_D ...
Probab=97.43 E-value=0.00023 Score=63.71 Aligned_cols=63 Identities=17% Similarity=0.272 Sum_probs=59.4
Q ss_pred HHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 405 RSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 405 rKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
.-|..+|++|.++..|..++.++|-.+++|+.|.|...|.+||++.|..||..+||+..++-.
T Consensus 40 ~YIyKVLKQVhpd~gISskAm~ImnSfvnDiferIA~EAs~La~~nkr~TitsreIqtAvrLl 102 (126)
T 1tzy_B 40 IYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLL 102 (126)
T ss_dssp HHHHHHHHHHCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHh
Confidence 348999999999999999999999999999999999999999999999999999999988754
No 32
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=97.32 E-value=0.0006 Score=56.64 Aligned_cols=69 Identities=14% Similarity=0.202 Sum_probs=59.9
Q ss_pred CcCCccCCHHHHHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHH
Q 009666 396 EFGNRILTKRSIQELVNQI--DPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHL 464 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqI--DPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhL 464 (529)
|+.+..+.++-|.+|++.. |.+.+|.+|+-+++-++.|-||...+.+|+..||-++.+.||+.|++-++
T Consensus 3 ~~~~~~~~~~lI~ril~~~f~~~ktrI~~dAl~l~aeyl~iFV~EAv~RA~~~a~~e~~~~le~~~LEki~ 73 (81)
T 3b0b_C 3 EEREGGFRKETVERLLRLHFRDGRTRVNGDALLLMAELLKVFVREAAARAARQAQAEDLEKVDIEHVEKVL 73 (81)
T ss_dssp ----CCCCHHHHHHHHHHHCCSTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeecHHHHHHHH
Confidence 4557788999999999987 45789999999999999999999999999999999999999999986554
No 33
>4g92_C HAPE; transcription factor, nucleosome, minor groove binding, CCAA complex, histone fold motif, specific binding to the ccaat- nucleus; HET: DNA; 1.80A {Aspergillus nidulans} PDB: 4g91_C*
Probab=97.25 E-value=0.00096 Score=57.93 Aligned_cols=74 Identities=16% Similarity=0.202 Sum_probs=65.9
Q ss_pred cCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCc
Q 009666 397 FGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNM 470 (529)
Q Consensus 397 ~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI 470 (529)
....-|...+|..+++.-.....+..|+-.+|...++.||..+++.|...|+.+|..+|..+||..++++.-.+
T Consensus 37 ~k~~~lPvaRIkrImK~d~~~~~is~eA~v~la~a~E~Fi~~L~~~A~~~a~~~krktI~~~di~~Av~~~e~~ 110 (119)
T 4g92_C 37 YKIHQLPLARIKKVMKADPEVKMISAEAPILFAKGCDVFITELTMRAWIHAEDNKRRTLQRSDIAAALSKSDMF 110 (119)
T ss_dssp SSCCSSCHHHHHHHHHTSTTCCEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHTTCGGG
T ss_pred cccCCCCHHHHHHHHhhCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCccCHHHHHHHHhcCchh
Confidence 34556899999999997555679999999999999999999999999999999999999999999999886434
No 34
>2jss_A Chimera of histone H2B.1 and histone H2A.Z; histone/chaperone complex, intrinsically unfolded protein, chaperone/structural protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.22.1.1 a.22.1.1
Probab=97.05 E-value=0.0017 Score=60.24 Aligned_cols=64 Identities=22% Similarity=0.287 Sum_probs=59.7
Q ss_pred HHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 404 KRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 404 KrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+--|..++++|.|+..|..++.+.|-.|.+|+.+.|+..|++|+++.+..||..+||+..++..
T Consensus 6 ~~yi~kvLkqv~p~~~iS~~Am~~m~s~v~di~~rIa~eA~~L~~~~~r~Tit~~eIq~Avrl~ 69 (192)
T 2jss_A 6 SSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLI 69 (192)
T ss_dssp HHHHHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcccCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHh
Confidence 3457889999999999999999999999999999999999999999999999999999988754
No 35
>2l5a_A Histone H3-like centromeric protein CSE4, protein histone H4; A single chain of CSE4+SCM3+H4, fusion protein; NMR {Saccharomyces cerevisiae}
Probab=97.03 E-value=0.00093 Score=64.89 Aligned_cols=76 Identities=20% Similarity=0.164 Sum_probs=64.6
Q ss_pred CccCCHHHHHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcc
Q 009666 399 NRILTKRSIQELVNQIDP-------SERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMT 471 (529)
Q Consensus 399 nrILtKrKLqELVrqIDP-------sesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~ 471 (529)
.-+|.|--++.||++|.- ...+..++..+|.+.+|.|+-.+.+.+...|.|.|--||..|||+|.. |-.|.+
T Consensus 9 ~~lI~KlPFqRLVREIaq~~~~~~~~lRfqs~Al~ALQEAaEayLV~LFEd~nLcaiHAkRVTim~kDiqLar-rirg~~ 87 (235)
T 2l5a_A 9 KLLISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMKKDMQLAR-RIRGQF 87 (235)
T ss_dssp --CCSCCHHHHHHHHHHHTSCGGGTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTSGGGTTHHHHHH-TSSCSC
T ss_pred cccccCccHHHHHHHHHHHhccCCccceecHHHHHHHHHHHHHHHHHHHhhhHHHHhcccccccchhhHHHHH-HHhhcc
Confidence 347889999999999932 468999999999999999999999999999999999999999999986 445655
Q ss_pred cCCC
Q 009666 472 LPGF 475 (529)
Q Consensus 472 IPGF 475 (529)
..++
T Consensus 88 ~~p~ 91 (235)
T 2l5a_A 88 LVPR 91 (235)
T ss_dssp CCCS
T ss_pred CCch
Confidence 5444
No 36
>1jfi_A Transcription regulator NC2 alpha chain; histone, H2A/H2B, tata-DNA, transcription initiation, NC2, negative cofactor, structural genomics, PSI; 2.62A {Homo sapiens} SCOP: a.22.1.3
Probab=96.96 E-value=0.0011 Score=55.73 Aligned_cols=74 Identities=16% Similarity=0.238 Sum_probs=57.2
Q ss_pred CCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcc
Q 009666 398 GNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMT 471 (529)
Q Consensus 398 ~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~ 471 (529)
.+-.|.=.++..+++.-+....+..|+--+|...+|-||.++++.|+..|+++|..+|..+||.+.++++-.+.
T Consensus 8 ~~~~fPvaRIkrimK~~~~~~~vs~~A~v~la~a~E~Fi~el~~~A~~~a~~~krktI~~~di~~av~~~e~l~ 81 (98)
T 1jfi_A 8 YNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEGDPA 81 (98)
T ss_dssp --CCCCHHHHHHHHTTSTTCCCBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTC---CBCHHHHHTTCC------
T ss_pred cCCCCChHHHHHHHHcCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecHHHHHHHHhcCchhh
Confidence 34567778899999974344799999999999999999999999999999999999999999999999865544
No 37
>4dra_E Centromere protein X; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_J
Probab=96.91 E-value=0.003 Score=52.98 Aligned_cols=67 Identities=15% Similarity=0.237 Sum_probs=58.9
Q ss_pred CCccCCHHHHHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHH
Q 009666 398 GNRILTKRSIQELVNQI--DPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHL 464 (529)
Q Consensus 398 ~nrILtKrKLqELVrqI--DPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhL 464 (529)
.+..|.++-|.+|++.. |.+.+|.+|+-.++-++.|-||...+.+|+..|+-.+...||+.|++-+|
T Consensus 9 ~~~~i~~~li~ril~~~F~~~kTkIs~dAl~l~aeyl~iFV~EAv~RA~~~a~~e~~~~le~e~LEki~ 77 (84)
T 4dra_E 9 AGSGFRKELVSRLLHLHFKDDKTKVSGDALQLMVELLKVFVVEAAVRGVRQAQAEDALRVDVDQLEKVL 77 (84)
T ss_dssp --CCCCHHHHHHHHHTTCSSTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhcCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHH
Confidence 35578899999999965 56789999999999999999999999999999999999999999986554
No 38
>2nqb_C Histone H2A; nucleosome, NCP, chromatin, structural protein/DNA complex; 2.30A {Drosophila melanogaster} PDB: 2pyo_C*
Probab=96.52 E-value=0.0059 Score=53.75 Aligned_cols=68 Identities=12% Similarity=0.190 Sum_probs=62.4
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
+-.|.-.++..++++-...+++..++-..|..+.|.|+.+|++.|..+|+|.|..+|..+||++.++.
T Consensus 21 gL~fPV~ri~R~Lk~~~~a~RV~~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~krItp~hi~lAI~n 88 (123)
T 2nqb_C 21 GLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRN 88 (123)
T ss_dssp TCSSCHHHHHHHHHHTTSCSEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHT
T ss_pred CeeccHHHHHHHHHccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccHHHHHHHHhc
Confidence 34567889999999986778999999999999999999999999999999999999999999998774
No 39
>2f8n_G Core histone macro-H2A.1; nucleosome, NCP, macroh2A, histone variant, chromatin, X- RAY structure, crystallography, structural protein/DNA complex; 2.90A {Homo sapiens} SCOP: a.22.1.1 PDB: 1u35_C
Probab=96.46 E-value=0.0067 Score=53.20 Aligned_cols=68 Identities=13% Similarity=0.231 Sum_probs=62.0
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
+-.|.-.++..++++-.-.+++..++-..|..+.|.|+.+|++.|..+|+|.|..+|..+||++.++.
T Consensus 20 gLqfPV~ri~R~Lk~~~~a~RV~~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~~rItp~hi~lAI~n 87 (120)
T 2f8n_G 20 GVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAVNAARDNKKGRVTPRHILLAVAN 87 (120)
T ss_dssp TCSSCHHHHHHHHHHHSSSCEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHT
T ss_pred CccCChHHHHHHHHcCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEcHHHHHHHHhc
Confidence 34567788999999987678999999999999999999999999999999999999999999998774
No 40
>1tzy_A Histone H2A-IV; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1eqz_A 1hq3_A 2aro_A 2hio_A 3c9k_A 3azg_C 3a6n_C 3an2_C 3av1_C 3av2_C 3ayw_C 3aze_C 3azf_C 3afa_C 3azh_C 3azi_C 3azj_C 3azk_C 3azl_C 3azm_C ...
Probab=96.41 E-value=0.0073 Score=53.61 Aligned_cols=68 Identities=12% Similarity=0.187 Sum_probs=62.4
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
+-.|.-.++..++++-...+.+..++-..|..+.|.|+.+|++.|..+|+|.+..+|..+||++.++.
T Consensus 23 gLqfPV~rI~R~Lk~~~~a~RVs~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~krItp~hi~lAI~n 90 (129)
T 1tzy_A 23 GLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRN 90 (129)
T ss_dssp TCSSCHHHHHHHHHHTTSSSEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHT
T ss_pred ceeccHHHHHHHHHccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHhc
Confidence 44577889999999976778999999999999999999999999999999999999999999998764
No 41
>1id3_C Histone H2A.1; nucleosome core particle, chromatin, protein/DNA interaction, nucleoprotein, supercoiled DNA; 3.10A {Saccharomyces cerevisiae} SCOP: a.22.1.1
Probab=96.37 E-value=0.0061 Score=54.20 Aligned_cols=68 Identities=10% Similarity=0.190 Sum_probs=62.7
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
+-.|.-.+|..++++-...++|..++-..|..+.|.|+.+|++.|..+|+|.|..+|..+||++.++.
T Consensus 23 gLqfPV~rI~R~Lk~~~~a~RVs~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~krItp~hI~lAI~n 90 (131)
T 1id3_C 23 GLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRN 90 (131)
T ss_dssp TCSSCHHHHHHHHHTTCSCSEECSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHT
T ss_pred CeecCHHHHHHHHHccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEcHHHHHHHHhc
Confidence 44678899999999976777999999999999999999999999999999999999999999998764
No 42
>2f8n_K Histone H2A type 1; nucleosome, NCP, macroh2A, histone variant, chromatin, X- RAY structure, crystallography, structural protein/DNA complex; 2.90A {Mus musculus} SCOP: a.22.1.1
Probab=96.36 E-value=0.0069 Score=55.22 Aligned_cols=68 Identities=13% Similarity=0.193 Sum_probs=62.3
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
+-.|.-.++..++++-.-.++|+.++-..|..+.|.|+.+|++.|..+|++.|..+|..+||++.++.
T Consensus 42 gLqFPVgrI~R~LK~~~~a~RVs~~A~VyLAAVLEYL~aEILelAgn~A~~~krkrItprhI~lAI~n 109 (149)
T 2f8n_K 42 GLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRN 109 (149)
T ss_dssp TCSSCHHHHHHHHHHTTSCSEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHH
T ss_pred CeeccHHHHHHHHHccccccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcHHHHHHHHhc
Confidence 44567788999999987778999999999999999999999999999999999999999999998764
No 43
>1bh9_B TAFII28; histone fold, tata binding protein, transcription regulation complex; HET: PMB; 2.60A {Homo sapiens} SCOP: a.22.1.3 PDB: 1bh8_B*
Probab=96.23 E-value=0.018 Score=48.44 Aligned_cols=65 Identities=17% Similarity=0.264 Sum_probs=54.6
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-CCcchhhHHHHHhh
Q 009666 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKS-DTLEAKDILVHLER 466 (529)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKS-dTLEvKDVQLhLER 466 (529)
-|+|+++..|++.|. +..+.++|..+|--||..||-++++.|..+.+.++. .-|..+.|.-.++|
T Consensus 16 ~f~k~~vKrl~~~~~-~~~v~~~v~i~v~glaKvfVgelVE~A~~V~~~~~~~~Pl~P~HireA~rr 81 (89)
T 1bh9_B 16 AFPKAAIKRLIQSIT-GTSVSQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMPPLQPKHMREAVRR 81 (89)
T ss_dssp CCCHHHHHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHc-CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHH
Confidence 479999999999995 668999999999999999999999999999988763 35666666555554
No 44
>1f66_C Histone H2A.Z; nucleosome, chromatin, histone variant, protein DNA interaction, nucleoprotein, supercoiled DNA, complex (nucleosome core/DNA); 2.60A {Homo sapiens} SCOP: a.22.1.1
Probab=96.02 E-value=0.014 Score=51.75 Aligned_cols=69 Identities=9% Similarity=0.116 Sum_probs=61.4
Q ss_pred CccCCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 399 NRILTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 399 nrILtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+-.|.-.+++.++++-. ..+.+..++-..|..+.|.|+.+|++.|...|+|.|..+|..+||++.+..+
T Consensus 25 gLqfPV~ri~R~Lk~~~~a~~RV~~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~krItprhi~lAI~nD 94 (128)
T 1f66_C 25 GLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGD 94 (128)
T ss_dssp TCSSCHHHHHHHHHHTSCSSCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHHHS
T ss_pred CccCChHHHHHHHHHcccchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHhcc
Confidence 34567788999999865 3469999999999999999999999999999999999999999999987653
No 45
>2byk_A Chrac-16; nucleosome sliding, histone fold, DNA-binding protein; 2.4A {Drosophila melanogaster} SCOP: a.22.1.3 PDB: 2bym_A
Probab=95.69 E-value=0.014 Score=52.42 Aligned_cols=75 Identities=12% Similarity=0.176 Sum_probs=54.0
Q ss_pred cCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh-hhcCCCCcchhhHHHHHhhccCcc
Q 009666 397 FGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLA-KHRKSDTLEAKDILVHLERNWNMT 471 (529)
Q Consensus 397 ~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLA-KHRKSdTLEvKDVQLhLERnWNI~ 471 (529)
.....|.-.+|..+++.-.....|..++-.+|...++.||..++..|+..| +.+|..||..+||..++++.-.+.
T Consensus 15 ~~~~~LPlaRIKrIMK~dpdv~~Is~eA~vliakA~ElFI~~Lt~~A~~~a~~~~kRKtI~~~Dl~~AV~~~e~~d 90 (140)
T 2byk_A 15 TAETFLPLSRVRTIMKSSMDTGLITNEVLFLMTKCTELFVRHLAGAAYTEEFGQRPGEALKYEHLSQVVNKNKNLE 90 (140)
T ss_dssp --------------CCSSSSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCEECHHHHHHHHHTCSTTG
T ss_pred ccCCCCCHHHHHHHHhcCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCHHHHHHHHhcCchhh
Confidence 455677778888888864444689999999999999999999999999999 999999999999999999764444
No 46
>2jss_A Chimera of histone H2B.1 and histone H2A.Z; histone/chaperone complex, intrinsically unfolded protein, chaperone/structural protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.22.1.1 a.22.1.1
Probab=95.67 E-value=0.028 Score=52.09 Aligned_cols=68 Identities=10% Similarity=0.155 Sum_probs=61.3
Q ss_pred CccCCHHHHHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 399 NRILTKRSIQELVNQIDP-SERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 399 nrILtKrKLqELVrqIDP-sesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
+-.|.=.+++.++++-.. .+.++.++-..|..+.|.|+.+|++.|...|||.|..+|..+||++.+..
T Consensus 103 gl~fPv~ri~R~lk~~~~a~~Rv~~~A~vyLaavLEyl~~eIlelA~n~a~~~~~~~I~p~~i~lAi~n 171 (192)
T 2jss_A 103 GLQFPVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRG 171 (192)
T ss_dssp SCCSCHHHHHHHHHHTTCSSCCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHT
T ss_pred CCcCCHHHHHHHHHhcCccccccccChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHhc
Confidence 446778899999998733 57999999999999999999999999999999999999999999998764
No 47
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=93.02 E-value=0.31 Score=45.45 Aligned_cols=67 Identities=10% Similarity=0.180 Sum_probs=55.3
Q ss_pred CCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhcc
Q 009666 402 LTKRSIQELVNQID--PSERLDPDVEDILVDIAED----FVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (529)
Q Consensus 402 LtKrKLqELVrqID--PsesLDpDVEELLLeIADD----FVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (529)
+++..+.++++..- .+..+++++.+.|.++++. .+.+++..|+.+|..++.+.|+.+||.-.|+...
T Consensus 259 ~~~~e~~~il~~~~~~~~~~~~~~~l~~l~~~~~~G~~r~~~~ll~~a~~~A~~~~~~~It~~~v~~a~~~~~ 331 (368)
T 3uk6_A 259 YSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFL 331 (368)
T ss_dssp CCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHSB
T ss_pred CCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHhc
Confidence 46777777777542 3467999999999999984 7788999999999999999999999998887643
No 48
>3v9r_B MHF2, uncharacterized protein YDL160C-A; histone fold, fanconi anemia, DNA repair, DNA BI protein; 2.40A {Saccharomyces cerevisiae}
Probab=91.10 E-value=0.24 Score=42.20 Aligned_cols=60 Identities=13% Similarity=0.227 Sum_probs=45.2
Q ss_pred CCHHHHHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-------CCcchhhHH
Q 009666 402 LTKRSIQELVNQI--DPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKS-------DTLEAKDIL 461 (529)
Q Consensus 402 LtKrKLqELVrqI--DPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKS-------dTLEvKDVQ 461 (529)
|+|.-|.+|+..- +.+.+|..|+-+++-++.|-||+..+-+|..-.+--+. -.||+.|+.
T Consensus 2 ip~~llaRIL~~~F~~~kTrIt~da~~lv~kY~diFVrEAv~Rs~e~ke~~~~~~~~~~d~~LeveDLE 70 (88)
T 3v9r_B 2 LSKEALIKILSQNEGGNDMKIADEVVPMIQKYLDIFIDEAVLRSLQSHKDINGERGDKSPLELSHQDLE 70 (88)
T ss_dssp CCSHHHHHHHTTTSCSSCCEECTTTHHHHHHHHHHHHHHHHHHHHHHHHCC-----------CCHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCceecHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCeeehHHHH
Confidence 6677788888744 56789999999999999999999999999655444222 267888863
No 49
>1h3o_A Transcription initiation factor TFIID 135 kDa subunit; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=90.40 E-value=0.28 Score=40.57 Aligned_cols=49 Identities=16% Similarity=0.221 Sum_probs=33.7
Q ss_pred HHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 009666 404 KRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSD 453 (529)
Q Consensus 404 KrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSd 453 (529)
++||.++.++ -+-..+.+||+++|.--++|-+.++++.-+.+|+||...
T Consensus 9 qkri~~I~~k-~gl~~~~~dv~~~iS~a~qeRLr~llekl~~~a~~R~~~ 57 (75)
T 1h3o_A 9 QRRILEIGKK-HGITELHPDVVSYVSHATQQRLQNLVEKISETAQQKNFS 57 (75)
T ss_dssp HHHHHHHHHT-TTCCEECTTHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHh-cCCCcCChhHHHHhHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3455566655 244678999999999999999999999999999999866
No 50
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=89.75 E-value=0.88 Score=42.28 Aligned_cols=73 Identities=15% Similarity=0.210 Sum_probs=56.0
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHH-----------------------HHHHHHHHHHhhhhcCCCCc
Q 009666 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDF-----------------------VESITMFGCSLAKHRKSDTL 455 (529)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDF-----------------------VDsVvs~ACrLAKHRKSdTL 455 (529)
..++..+.|.++.+.+ .+..+++++.+.|.+++.+. ...++..+..+|+.++.+.|
T Consensus 207 ~~~~~~~~i~~~~~~~-~~v~~~~~~~~~i~~~~~~~r~~~~~~~~~~~~~~~~~~s~R~~~~ll~~a~a~A~l~g~~~v 285 (331)
T 2r44_A 207 QKIVSKNDVLEIRNEI-NKVTISESLEKYIIELVFATRFPAEYGLEAEASYILYGASTRAAINLNRVAKAMAFFNNRDYV 285 (331)
T ss_dssp CCCSCHHHHHHHHHHH-HTCBCCHHHHHHHHHHHHHHHSGGGGTCHHHHHHEEECCCHHHHHHHHHHHHHHHHHTTCSBC
T ss_pred cccCCHHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHhccccccccccccccccCcChhHHHHHHHHHHHHHHHcCCCCC
Confidence 4566777777766554 46789999999999988543 33567778888999999999
Q ss_pred chhhHHHHHhhccCccc
Q 009666 456 EAKDILVHLERNWNMTL 472 (529)
Q Consensus 456 EvKDVQLhLERnWNI~I 472 (529)
+..||+-.++.-+..++
T Consensus 286 ~~~dv~~~~~~vl~~r~ 302 (331)
T 2r44_A 286 LPEDIKEVAYDILNHRI 302 (331)
T ss_dssp CHHHHHHHHHHHHTTTS
T ss_pred CHHHHHHHHHHHhHhhc
Confidence 99999988887665554
No 51
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=89.19 E-value=1.6 Score=40.01 Aligned_cols=67 Identities=9% Similarity=0.105 Sum_probs=52.6
Q ss_pred cCCHHHHHHHHHhh----CCCCCCCHHHHHHHHHHHH------HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 401 ILTKRSIQELVNQI----DPSERLDPDVEDILVDIAE------DFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 401 ILtKrKLqELVrqI----DPsesLDpDVEELLLeIAD------DFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
-+++..+.++++.. .....+++++.+.|.++++ .++.+++..++.+|..++.+.|+.+||.-.+++.
T Consensus 196 ~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~l~~~~~~~~G~~r~~~~ll~~a~~~a~~~~~~~i~~~~v~~a~~~~ 272 (386)
T 2qby_A 196 PYNAEELEDILTKRAQMAFKPGVLPDNVIKLCAALAAREHGDARRALDLLRVSGEIAERMKDTKVKEEYVYMAKEEI 272 (386)
T ss_dssp CCCHHHHHHHHHHHHHHHBCSSCSCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHH
Confidence 34677788777753 2346899999999999998 3456789999999998888899999998666553
No 52
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=89.00 E-value=1.1 Score=41.10 Aligned_cols=56 Identities=5% Similarity=-0.142 Sum_probs=47.1
Q ss_pred CCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCccc
Q 009666 417 SERLDPDVEDILVDIAED-------FVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTL 472 (529)
Q Consensus 417 sesLDpDVEELLLeIADD-------FVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~I 472 (529)
...|++++.++|.+++.. -+.+++..|+.+|+.++.+.|+.+||...++.-+.-++
T Consensus 265 ~~~ls~~~~~~l~~~~~~~~~~~~R~~~~ll~~a~~~A~~~~~~~v~~~~v~~a~~~~l~~r~ 327 (350)
T 1g8p_A 265 KVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRL 327 (350)
T ss_dssp GCBCCHHHHHHHHHHHHHSSSCSHHHHHHHHHHHHHHHHHTTCSBCCHHHHHHHHHHHHGGGC
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHHHHhhcc
Confidence 458999999999999875 57889999999999999999999999887776555443
No 53
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=87.84 E-value=0.75 Score=42.29 Aligned_cols=66 Identities=14% Similarity=0.234 Sum_probs=54.2
Q ss_pred CCHHHHHHHHHhhC----CCCCCCHHHHHHHHHHHH------HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 402 LTKRSIQELVNQID----PSERLDPDVEDILVDIAE------DFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 402 LtKrKLqELVrqID----PsesLDpDVEELLLeIAD------DFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+++..+.++++..- ....+++++.+.|.++++ .++.+++..++.+|..++.+.|+.+||.-.+++.
T Consensus 201 l~~~~~~~il~~~~~~~~~~~~~~~~~~~~l~~~~~~~~G~~r~~~~~l~~a~~~a~~~~~~~i~~~~v~~a~~~~ 276 (387)
T 2v1u_A 201 YTAPQLRDILETRAEEAFNPGVLDPDVVPLCAALAAREHGDARRALDLLRVAGEIAERRREERVRREHVYSARAEI 276 (387)
T ss_dssp CCHHHHHHHHHHHHHHHBCTTTBCSSHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHTTCSCBCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHH
Confidence 46778888877541 346899999999999998 5677999999999999899999999998777664
No 54
>3aji_B S6C, proteasome (prosome, macropain) 26S subunit, ATPA; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dwz_B* 2dvw_B*
Probab=85.30 E-value=0.41 Score=37.31 Aligned_cols=43 Identities=19% Similarity=0.093 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCCCCccccccc
Q 009666 436 VESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGDEIKTF 483 (529)
Q Consensus 436 VDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssDEIR~~ 483 (529)
|..++..|+..|-.|+...|+.+|+.-.|++- .|+.. ++++-|
T Consensus 40 i~~l~~eA~~~a~~~~~~~i~~~df~~Al~~~----~ps~~-~~l~~y 82 (83)
T 3aji_B 40 INSICQESGMLAVRENRYIVLAKDFEKAYKTV----IKKDE-QEHEFY 82 (83)
T ss_dssp HHHHHHHHHHGGGTSCCSSBCHHHHHHHHHHH----CC----------
T ss_pred HHHHHHHHHHHHHHhccCCcCHHHHHHHHHHH----ccCch-HHHHhc
Confidence 77899999999999999999999998888874 46665 555544
No 55
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=84.10 E-value=2 Score=36.62 Aligned_cols=62 Identities=10% Similarity=-0.051 Sum_probs=43.6
Q ss_pred CHHHHHHHHHhh--CCCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 403 TKRSIQELVNQI--DPSERLDPDVEDILVDIAE---DFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 403 tKrKLqELVrqI--DPsesLDpDVEELLLeIAD---DFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
+.+.+.++++.+ ..+..+++++.+.|.+.++ .-+.++++.+|..|...+. .|+.+||.-.|+
T Consensus 175 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~r~l~~~l~~~~~~a~~~~~-~It~~~v~~~l~ 241 (242)
T 3bos_A 175 MDDEKLAALQRRAAMRGLQLPEDVGRFLLNRMARDLRTLFDVLDRLDKASMVHQR-KLTIPFVKEMLR 241 (242)
T ss_dssp CGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTC-CCCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHhh
Confidence 334444444443 1345799999999998876 3566788888888876664 589999987775
No 56
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=83.54 E-value=5.4 Score=41.86 Aligned_cols=65 Identities=14% Similarity=0.125 Sum_probs=51.2
Q ss_pred CCCCCCHHHHHHHHHHHHHH---------HHHHHHHHHHhhhh----cCCCCcchhhHHHHHhhccCcccCCCCcccc
Q 009666 416 PSERLDPDVEDILVDIAEDF---------VESITMFGCSLAKH----RKSDTLEAKDILVHLERNWNMTLPGFSGDEI 480 (529)
Q Consensus 416 PsesLDpDVEELLLeIADDF---------VDsVvs~ACrLAKH----RKSdTLEvKDVQLhLERnWNI~IPGFssDEI 480 (529)
....+++++.+.+.++++.| +.++++.+|..++. .+...|+.+||.-++++..++.+..+..+|+
T Consensus 369 ~~v~~~~~al~~~~~~s~~~i~~~~lp~~~i~lld~a~~~~~~~~~~~~~~~v~~~di~~~~~~~~~ip~~~~~~~~~ 446 (758)
T 1r6b_X 369 HDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDR 446 (758)
T ss_dssp HTCCCCHHHHHHHHHHHHHHCTTSCTTHHHHHHHHHHHHHHHHSSSCCCCCSCCHHHHHHHHHHHSCCCCCCSSSSHH
T ss_pred cCCCCCHHHHHHHHHHhhhhcccccCchHHHHHHHHHHHHHhcccccccCCccCHHHHHHHHHHhcCCCccccchhHH
Confidence 35679999999999999886 44678888888776 3456789999999999987777766665553
No 57
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=83.18 E-value=2.3 Score=39.32 Aligned_cols=66 Identities=14% Similarity=0.185 Sum_probs=52.4
Q ss_pred CCHHHHHHHHHhhC----CCCCCCHHHHHHHHHHH---------H---HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 402 LTKRSIQELVNQID----PSERLDPDVEDILVDIA---------E---DFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 402 LtKrKLqELVrqID----PsesLDpDVEELLLeIA---------D---DFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
+++..+.++++..- ....+++++.+.|.+++ + .++.+++..++.+|..++.+.|+.+||...++
T Consensus 193 l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~G~~r~~~~~l~~a~~~a~~~~~~~i~~~~v~~~~~ 272 (389)
T 1fnn_A 193 YTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSK 272 (389)
T ss_dssp CBHHHHHHHHHHHHHHHBCTTSSCHHHHHHHHHHHSBSSTTCTTSCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhcccCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcCHHHHHHHHH
Confidence 46677777776542 23579999999999999 2 34788999999999999999999999988777
Q ss_pred hc
Q 009666 466 RN 467 (529)
Q Consensus 466 Rn 467 (529)
..
T Consensus 273 ~~ 274 (389)
T 1fnn_A 273 EV 274 (389)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 58
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=83.08 E-value=4.2 Score=37.74 Aligned_cols=64 Identities=6% Similarity=0.088 Sum_probs=50.8
Q ss_pred CCHHHHHHHHHhh----CCCCCCCHHHHHHHHHHHH---H---HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 402 LTKRSIQELVNQI----DPSERLDPDVEDILVDIAE---D---FVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 402 LtKrKLqELVrqI----DPsesLDpDVEELLLeIAD---D---FVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+++..+.++++.. -....+++++.+.|.++++ - .+.+++..++.+|. +...|+.+||.-.|++.
T Consensus 197 l~~~~~~~il~~~~~~~~~~~~~~~~~~~~i~~~~~~~~G~~r~a~~~l~~a~~~a~--~~~~i~~~~v~~~~~~~ 270 (384)
T 2qby_B 197 YDAEQLKFILSKYAEYGLIKGTYDDEILSYIAAISAKEHGDARKAVNLLFRAAQLAS--GGGIIRKEHVDKAIVDY 270 (384)
T ss_dssp CCHHHHHHHHHHHHHHTSCTTSCCSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTT--SSSCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhcccCCcCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhc--CCCccCHHHHHHHHHHH
Confidence 4788888888864 1346899999999999987 2 45678888998988 66789999998887765
No 59
>3kw6_A 26S protease regulatory subunit 8; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Homo sapiens}
Probab=81.83 E-value=0.69 Score=35.74 Aligned_cols=44 Identities=7% Similarity=0.065 Sum_probs=37.4
Q ss_pred HHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhcc
Q 009666 425 EDILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (529)
Q Consensus 425 EELLLeIADDF----VDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (529)
.+.|.+.++.| |..|+..|+..|-.|+...|+.+|+.-.|++..
T Consensus 27 l~~la~~t~G~SGADi~~l~~eA~~~a~~~~~~~i~~~d~~~Al~~v~ 74 (78)
T 3kw6_A 27 LRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVM 74 (78)
T ss_dssp HHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 34566677767 899999999999999999999999999998854
No 60
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=81.40 E-value=1.8 Score=38.98 Aligned_cols=67 Identities=13% Similarity=0.079 Sum_probs=48.1
Q ss_pred CCHHHHHHHHHhhCCCCCCCHH-HHHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhcc
Q 009666 402 LTKRSIQELVNQIDPSERLDPD-VEDILVDIAED----FVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (529)
Q Consensus 402 LtKrKLqELVrqIDPsesLDpD-VEELLLeIADD----FVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (529)
.+.+...++++..-....++.+ ..+.|.++++. -|+.++..|+..|..++.+.|+.+||.-.|++..
T Consensus 188 p~~~~r~~il~~~~~~~~~~~~~~~~~l~~~~~g~~~~~i~~l~~~a~~~a~~~~~~~I~~~d~~~al~~~~ 259 (285)
T 3h4m_A 188 PDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIM 259 (285)
T ss_dssp CCHHHHHHHHHHHHTTSCBCTTCCHHHHHHHCTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCCcCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccCcCCHHHHHHHHHHHH
Confidence 4667777777766444444333 23445555544 4778999999999999999999999999998764
No 61
>3vlf_B 26S protease regulatory subunit 7 homolog; heat repeat, chaperone, chaperone-protein binding complex; HET: DNA; 3.80A {Saccharomyces cerevisiae} PDB: 4a3v_B*
Probab=81.04 E-value=0.61 Score=37.40 Aligned_cols=42 Identities=12% Similarity=0.226 Sum_probs=35.9
Q ss_pred HHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 426 DILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 426 ELLLeIADDF----VDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+.|.+..+.| |..|+..|+..|-+|+...|+.+|+.-.|++-
T Consensus 26 ~~lA~~t~G~SGADl~~l~~eAa~~a~r~~~~~i~~~df~~Al~~v 71 (88)
T 3vlf_B 26 ELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKV 71 (88)
T ss_dssp HHHHHTCSSCCHHHHHHHHHHHHHHHHHHSCSSBCHHHHHHHHHHH
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHH
Confidence 4455666667 88999999999999999999999999999884
No 62
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=80.86 E-value=7 Score=30.55 Aligned_cols=73 Identities=8% Similarity=0.054 Sum_probs=40.1
Q ss_pred CcCCccCCHHHHHHHHHhhCCCCCCCHH-HHHHHHHH---------HHHHHHHH----------------HHHHHHhhhh
Q 009666 396 EFGNRILTKRSIQELVNQIDPSERLDPD-VEDILVDI---------AEDFVESI----------------TMFGCSLAKH 449 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPsesLDpD-VEELLLeI---------ADDFVDsV----------------vs~ACrLAKH 449 (529)
.+++..|++..|..+++.++- .++++ +++++..+ .++|+.-+ +..+++..-.
T Consensus 22 ~d~~G~i~~~el~~~l~~~~~--~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~ 99 (153)
T 3ox6_A 22 KDKDGYINCRDLGNCMRTMGY--MPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDT 99 (153)
T ss_dssp HHCSSSCCHHHHHHHHHHTTC--CCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHHHHHCT
T ss_pred CCCCCcCcHHHHHHHHHHcCC--CCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHHHHHHHHHhCC
Confidence 345667888888888877643 33333 33333332 34555433 3344444444
Q ss_pred cCCCCcchhhHHHHHhhccCc
Q 009666 450 RKSDTLEAKDILVHLERNWNM 470 (529)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI 470 (529)
.+...|+..++.-.|...+|.
T Consensus 100 d~~G~i~~~el~~~l~~~~~~ 120 (153)
T 3ox6_A 100 NGDGEISTSELREAMRALLGH 120 (153)
T ss_dssp TCSSSBCHHHHHHHHHHHHSS
T ss_pred CCCCcCcHHHHHHHHHHHhcC
Confidence 455667777776666654443
No 63
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli}
Probab=79.83 E-value=6.8 Score=40.61 Aligned_cols=116 Identities=11% Similarity=0.022 Sum_probs=77.2
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAED-------------FVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADD-------------FVDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
..+++...|.++.+.+. ...++++|.|.+.+++.+ ....++..|..+|+.++.+.|+..||. .+.
T Consensus 206 ~~~~~~e~l~~~~~~~~-~v~v~d~v~e~i~~l~~~lr~~r~~~~iS~R~~~~llr~A~A~A~l~gr~~Vt~eDv~-~a~ 283 (500)
T 3nbx_X 206 ALQVTDEEYERWQKEIG-EITLPDHVFELIFMLRQQLDKLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVDLI-LLK 283 (500)
T ss_dssp TTSBCHHHHHHHHHHHT-TCBCCHHHHHHHHHHHHHHHHCSSSCCCCHHHHHHHHHHHHHHHHHTTCSBCCGGGGG-GGG
T ss_pred cceecHHHHHHHHhcCC-cccCchHHHHHHHHHHHHhhcCCCCCccchhHHHHHHHHHHHHHhhcCCccccchHHH-HHH
Confidence 56788999999888874 478999999999999853 445688899999999999999999998 443
Q ss_pred hccCcccCCCC--ccccccc-C-CCCCchHHHHHHHHHHHHHhhhhhheeeecce
Q 009666 466 RNWNMTLPGFS--GDEIKTF-R-KPLVCDIHKERLAAVSFTLDIMCLLVIYKDAC 516 (529)
Q Consensus 466 RnWNI~IPGFs--sDEIR~~-R-K~~ptEaHKQRMALIRKtiK~m~~~~~~~~~~ 516 (529)
.-..-++-... .+.++.+ + ......+-..++..|+..++.+..-+.-++++
T Consensus 284 ~vL~hr~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (500)
T 3nbx_X 284 DCLWYDAQSLNLIQQQIDVLMTGHAWQQQGMLTRLGAIVQRHLQLQQQQSDKTAL 338 (500)
T ss_dssp GTSCSSHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHTCSSCCC
T ss_pred hhhhcCchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhe
Confidence 32222210000 0001110 1 12233556667777777777777666666654
No 64
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=79.49 E-value=1.9 Score=38.56 Aligned_cols=65 Identities=9% Similarity=0.088 Sum_probs=44.3
Q ss_pred CHHHHHHHHHhhCCCCCCCHHH-HHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 403 TKRSIQELVNQIDPSERLDPDV-EDILVDIAED----FVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 403 tKrKLqELVrqIDPsesLDpDV-EELLLeIADD----FVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+.+...++++..-....+++++ .++|.+..+. -|++++..|+.+|..++.+.|+.+|+.-.+++.
T Consensus 183 ~~~~r~~il~~~~~~~~l~~~~~~~~la~~~~G~~~~dl~~l~~~a~~~a~~~~~~~i~~~~~~~a~~~~ 252 (257)
T 1lv7_A 183 DVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKI 252 (257)
T ss_dssp CHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCccccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHH
Confidence 4444455666554445555554 3344333333 467899999999999999999999999888863
No 65
>2ly8_A Budding yeast chaperone SCM3; centromere protein, CENH3 variants, partially unfolded; NMR {Saccharomyces cerevisiae}
Probab=79.20 E-value=3.3 Score=36.71 Aligned_cols=50 Identities=18% Similarity=0.221 Sum_probs=43.7
Q ss_pred cCCHHHHHHHHHhhC----C---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 009666 401 ILTKRSIQELVNQID----P---SERLDPDVEDILVDIAEDFVESITMFGCSLAKHR 450 (529)
Q Consensus 401 ILtKrKLqELVrqID----P---sesLDpDVEELLLeIADDFVDsVvs~ACrLAKHR 450 (529)
+|.|--.+.|||+|- . ...+..++..+|.+.+|+|+-...+.+-..|.|.
T Consensus 1 LI~klPF~RLVREI~~~~~~~~~~lRfq~~Al~ALQeAsEayLV~lFEd~nlcaiHA 57 (121)
T 2ly8_A 1 LISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHL 57 (121)
T ss_dssp CCSCCHHHHHHHHHHHHHTTCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHHHHHHHHHHHHHhHHHHcC
Confidence 466777888999882 2 5689999999999999999999999999999997
No 66
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus}
Probab=79.15 E-value=5.1 Score=41.48 Aligned_cols=51 Identities=12% Similarity=0.149 Sum_probs=42.9
Q ss_pred CCCCCCHHHHHHHHHHHH-------------HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 416 PSERLDPDVEDILVDIAE-------------DFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 416 PsesLDpDVEELLLeIAD-------------DFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
....|++++.+.|++.+. ..+.+++..|+.+|+.++.+.|+.+||.-.+++
T Consensus 311 ~~~~ls~eAl~~Li~~~~r~~g~r~~l~~~~R~l~~llr~A~~~A~~~~~~~I~~edv~~A~~~ 374 (604)
T 3k1j_A 311 KIPHFTKEAVEEIVREAQKRAGRKGHLTLRLRDLGGIVRAAGDIAVKKGKKYVEREDVIEAVKM 374 (604)
T ss_dssp SSCCBBHHHHHHHHHHHHHTTCSTTEEECCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHhhhhccccccccCHHHHHHHHHHHHHHHHhcCcccccHHHHHHHHHh
Confidence 345899999999988763 467789999999999999999999999887754
No 67
>1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1
Probab=77.77 E-value=1.2 Score=35.48 Aligned_cols=37 Identities=16% Similarity=0.239 Sum_probs=14.1
Q ss_pred hhcCCCCcchhhHHHHHhhccCcccC---CCCcccccccC
Q 009666 448 KHRKSDTLEAKDILVHLERNWNMTLP---GFSGDEIKTFR 484 (529)
Q Consensus 448 KHRKSdTLEvKDVQLhLERnWNI~IP---GFssDEIR~~R 484 (529)
..-|-+.|++-++...||+.||+.|| -....++++++
T Consensus 39 ~dlg~DSl~~vel~~~lE~~fgi~i~~~~~~~~~~~~Tv~ 78 (92)
T 1fh1_A 39 TSLGIDSLGLADVLWDLEQLYGIKIEMNTADAWSNLNNIG 78 (92)
T ss_dssp -------CTTTTHHHHHHHC-----------------CTT
T ss_pred hhcCCChHHHHHHHHHHHHHhCCccCCccHhHHhhcCCHH
Confidence 44578899999999999999999998 44334444443
No 68
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=77.27 E-value=4.8 Score=40.01 Aligned_cols=68 Identities=13% Similarity=0.177 Sum_probs=54.8
Q ss_pred CCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHH-H---HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccC
Q 009666 402 LTKRSIQELVNQID--PSERLDPDVEDILVDIA-E---DFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWN 469 (529)
Q Consensus 402 LtKrKLqELVrqID--PsesLDpDVEELLLeIA-D---DFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWN 469 (529)
+++..|.+.++.+. .+..+++++.++|.+++ + ....++++.|..+|..++.+.|+.+||.-.++.-+|
T Consensus 366 ~~~~e~~~iL~~~~~~~~~~~~~~~~~~i~~~a~~g~~r~a~~ll~~a~~~A~~~~~~~v~~~~v~~~~~~~~d 439 (456)
T 2c9o_A 366 YTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYD 439 (456)
T ss_dssp CCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHHHSCHHHHHHTHHHHHHHHHHTTCSSBCHHHHHHHHHHSCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHccCCCHHHHHHHHHHHHHHHhhcCCCccCHHHHHHHHHHhcC
Confidence 47788888887653 24579999999999998 4 356778888889999999999999999988877554
No 69
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=76.09 E-value=8.6 Score=35.91 Aligned_cols=68 Identities=13% Similarity=0.170 Sum_probs=53.4
Q ss_pred cCCHHHHHHHHHhh----CCCCCCCHHHHHHHHHHHH---------HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 401 ILTKRSIQELVNQI----DPSERLDPDVEDILVDIAE---------DFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 401 ILtKrKLqELVrqI----DPsesLDpDVEELLLeIAD---------DFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
-|+.+.+.+|++.. .....+++++.+.|.++++ -++..++..++.+|..++...++.+||.-.+++.
T Consensus 214 ~l~~~e~~~ll~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~G~p~~~~~l~~~a~~~a~~~~~~~i~~~~v~~~~~~~ 293 (412)
T 1w5s_A 214 AYKSRELYTILEQRAELGLRDTVWEPRHLELISDVYGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSEDLVRKAVSEN 293 (412)
T ss_dssp CCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHHHHHCGGGTSCCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 45777888887542 2335689999999999998 3788999999999999998899999998777664
Q ss_pred c
Q 009666 468 W 468 (529)
Q Consensus 468 W 468 (529)
.
T Consensus 294 ~ 294 (412)
T 1w5s_A 294 E 294 (412)
T ss_dssp -
T ss_pred h
Confidence 3
No 70
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=75.50 E-value=4.3 Score=33.55 Aligned_cols=63 Identities=13% Similarity=0.061 Sum_probs=43.2
Q ss_pred cCCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 401 ILTKRSIQELVNQID--PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 401 ILtKrKLqELVrqID--PsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
-+++..+.++++++- .+..+++++.+.|.+.++--+..++...++++... +.|+.+||.-.+.
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~r~l~~~l~~~~~~~--~~I~~~~v~~~~~ 224 (226)
T 2chg_A 160 PVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIG--EVVDADTIYQITA 224 (226)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHTTCHHHHHHHHHHHHHTC--SCBCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhcC--ceecHHHHHHHhc
Confidence 356777777777653 24468999988888888766665555555555432 6899999977664
No 71
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=74.77 E-value=0.59 Score=45.28 Aligned_cols=14 Identities=36% Similarity=0.351 Sum_probs=4.1
Q ss_pred hhhcccccCCCCCC
Q 009666 319 QQHLSSVQPQQSKP 332 (529)
Q Consensus 319 qqqlsq~qqqq~~~ 332 (529)
||++.|.||||+++
T Consensus 381 ~~~~~~~~~~~~~~ 394 (449)
T 3iot_A 381 FESLKSFQQQQQQQ 394 (449)
T ss_dssp HHHHHHTC------
T ss_pred HHHHHhhccccccc
Confidence 45555554444433
No 72
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=74.76 E-value=3.1 Score=36.58 Aligned_cols=66 Identities=12% Similarity=0.060 Sum_probs=35.2
Q ss_pred CCHHHHHHHHHhhCC--CCCCCHHH-HHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 402 LTKRSIQELVNQIDP--SERLDPDV-EDILVDIAED----FVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 402 LtKrKLqELVrqIDP--sesLDpDV-EELLLeIADD----FVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
.+.+...+|++.+-. ...+++++ .+.|.+..+. -|..++..|+..|..++.+.|+.+|+...|++.
T Consensus 177 p~~~~r~~il~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~l~~l~~~a~~~a~~~~~~~i~~~d~~~a~~~~ 249 (262)
T 2qz4_A 177 PTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVERV 249 (262)
T ss_dssp CCHHHHHHHHHHHHHHTTCCBTHHHHHHHHHHTCTTCCHHHHHHHHHHHHTC--------CCBCCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCCcchhhHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHh
Confidence 344555555544322 22334433 2444444333 477889999999999989999999999888874
No 73
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=73.98 E-value=2.1 Score=38.22 Aligned_cols=62 Identities=16% Similarity=0.191 Sum_probs=41.3
Q ss_pred CHHHHHHHHHhhCCCCCCCHHH-HHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHH
Q 009666 403 TKRSIQELVNQIDPSERLDPDV-EDILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHL 464 (529)
Q Consensus 403 tKrKLqELVrqIDPsesLDpDV-EELLLeIADDF----VDsVvs~ACrLAKHRKSdTLEvKDVQLhL 464 (529)
+.+...++++.......+++|+ .+.|.+..+.| |++++..|+.+|..++...|+.+|+.-.|
T Consensus 187 ~~~~r~~il~~~~~~~~~~~~~~~~~la~~~~G~~~~dl~~~~~~a~~~a~~~~~~~I~~~dl~~a~ 253 (254)
T 1ixz_A 187 DVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAA 253 (254)
T ss_dssp CHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCCCCCcccCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHh
Confidence 3444445555544445566554 44555554433 67889999999998888889999987654
No 74
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=73.37 E-value=8.1 Score=36.81 Aligned_cols=74 Identities=11% Similarity=0.151 Sum_probs=53.1
Q ss_pred ccCCHHHHHHHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHH----Hhhhh--cCCCCcchhhHHHHHhhccCccc
Q 009666 400 RILTKRSIQELVNQI-DPSERLDPDVEDILVDIAEDFVESITMFGC----SLAKH--RKSDTLEAKDILVHLERNWNMTL 472 (529)
Q Consensus 400 rILtKrKLqELVrqI-DPsesLDpDVEELLLeIADDFVDsVvs~AC----rLAKH--RKSdTLEvKDVQLhLERnWNI~I 472 (529)
--|+-.....+++.| |.-.++|++-.+...+=+++|+..+-...- +|++. ++...|..-|.--||.|.||+.+
T Consensus 105 vWldp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~ld~~~~~~l~~~~~~~~~~vt~H~af~Y~~~~yGl~~ 184 (282)
T 3mfq_A 105 FWFSIPLYKSAVAVASEELQKLLPAKAEMIQKNTEKYQAQLDDLHAWVEKELSVIPKESRYLVTPHDAFNYFAASYDFTL 184 (282)
T ss_dssp GGGSHHHHHHHHHHHHHHHTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCEEECSSSCCHHHHHHTTCEE
T ss_pred ccCCHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCcEEEEECchHHHHHHHCCCeE
Confidence 456777777888877 445689999888888889999888755443 34443 22333455788789999999985
Q ss_pred C
Q 009666 473 P 473 (529)
Q Consensus 473 P 473 (529)
=
T Consensus 185 ~ 185 (282)
T 3mfq_A 185 Y 185 (282)
T ss_dssp E
T ss_pred e
Confidence 3
No 75
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=73.12 E-value=11 Score=34.40 Aligned_cols=66 Identities=9% Similarity=0.010 Sum_probs=50.4
Q ss_pred cCCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 401 ILTKRSIQELVNQID--PSERLDPDVEDILVDIAE---DFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 401 ILtKrKLqELVrqID--PsesLDpDVEELLLeIAD---DFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
.++.+.+.++++.+- -+..+++++.+.|.+.++ ..+.+++..++.+|..++.+.|+..|+...++.
T Consensus 167 ~~~~~e~~~~l~~~~~~~~~~~~~~~~~~l~~~~~G~~r~l~~~l~~~~~~a~~~~~~~i~~~~~~~~~~~ 237 (324)
T 1hqc_A 167 YYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAA 237 (324)
T ss_dssp CCCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHSCSCHHHHHHHHHHHTTTSTTTSCSCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 346677777777663 245799999998888763 356678888888898888889999999877765
No 76
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=72.34 E-value=14 Score=37.41 Aligned_cols=67 Identities=10% Similarity=0.123 Sum_probs=50.2
Q ss_pred cCCHHHHHHHHHhh--C-------CCCCCCHHHHHHHHHHHHH---HHHHHHHHHHHhhhhc--CCCCcchhhHHHHHhh
Q 009666 401 ILTKRSIQELVNQI--D-------PSERLDPDVEDILVDIAED---FVESITMFGCSLAKHR--KSDTLEAKDILVHLER 466 (529)
Q Consensus 401 ILtKrKLqELVrqI--D-------PsesLDpDVEELLLeIADD---FVDsVvs~ACrLAKHR--KSdTLEvKDVQLhLER 466 (529)
.+++..|.++++.+ + ....|++++.+.|.++++- -+.++++.++.+|..+ +...|+.+||.-.|.+
T Consensus 164 ~l~~edi~~il~~~l~~~~~~~~~~~~~i~~~al~~L~~~~~Gd~R~lln~Le~a~~~a~~~~~~~~~It~e~v~~~l~~ 243 (447)
T 3pvs_A 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGE 243 (447)
T ss_dssp CCCHHHHHHHHHHHHHCTTTSSTTSSEECCHHHHHHHHHHHCSCHHHHHHHHHHHHHHSCBCTTSCEECCHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHHHhhhhccccCcCCHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccccCCCCccCHHHHHHHHhh
Confidence 35677788887766 2 3356999999999999863 4556778888888755 5567999999888876
Q ss_pred c
Q 009666 467 N 467 (529)
Q Consensus 467 n 467 (529)
.
T Consensus 244 ~ 244 (447)
T 3pvs_A 244 R 244 (447)
T ss_dssp C
T ss_pred h
Confidence 4
No 77
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=71.54 E-value=0.36 Score=50.99 Aligned_cols=12 Identities=8% Similarity=-0.008 Sum_probs=4.9
Q ss_pred HHHHHHHHHHHH
Q 009666 492 HKERLAAVSFTL 503 (529)
Q Consensus 492 HKQRMALIRKti 503 (529)
+..|..+|.+.|
T Consensus 423 w~~R~~~i~~~I 434 (727)
T 4b8c_D 423 WDYRRNKLKEQI 434 (727)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhhhhhHHHHHH
Confidence 333444444444
No 78
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=70.75 E-value=3.9 Score=39.03 Aligned_cols=105 Identities=17% Similarity=0.185 Sum_probs=66.8
Q ss_pred cCCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHH----HHHhhhhcCCCCcchhhHHHHHhhccCcccCCC
Q 009666 401 ILTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMF----GCSLAKHRKSDTLEAKDILVHLERNWNMTLPGF 475 (529)
Q Consensus 401 ILtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvs~----ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGF 475 (529)
-|+-+....+++.|. .-.++|++-.+...+=+++|+..+-.. .-+|++.++...|...|.--||.|.||+.+-|+
T Consensus 124 Wldp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~~ 203 (286)
T 3gi1_A 124 WTDPVLAGEEAVNIAKELGRLDPKHKDSYTKNAKAFKKEAEQLTEEYTQKFKKVRSKTFVTQHTAFSYLAKRFGLKQLGI 203 (286)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEEESCCHHHHHHTTCEEEEE
T ss_pred ecCHHHHHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCchHHHHHHCCCeEeec
Confidence 366777777777763 334677777777777777887776443 334666667777888999999999999986443
Q ss_pred CcccccccCCCCCchHHHHHHHHHHHHHhhhhhheee
Q 009666 476 SGDEIKTFRKPLVCDIHKERLAAVSFTLDIMCLLVIY 512 (529)
Q Consensus 476 ssDEIR~~RK~~ptEaHKQRMALIRKtiK~m~~~~~~ 512 (529)
-. +.+ ..|-=-++|+.|.+.||+--.-+||
T Consensus 204 ~~--~~~-----~~eps~~~l~~l~~~ik~~~v~~if 233 (286)
T 3gi1_A 204 SG--ISP-----EQEPSPRQLKEIQDFVKEYNVKTIF 233 (286)
T ss_dssp EC--SCC--------CCHHHHHHHHHHHHHTTCCEEE
T ss_pred cc--cCC-----CCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 21 111 1122245666677777665555444
No 79
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=70.65 E-value=7.6 Score=36.84 Aligned_cols=67 Identities=10% Similarity=0.195 Sum_probs=48.7
Q ss_pred ccCCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 400 RILTKRSIQELVNQID--PSERLDPDVEDILVDIAE---DFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 400 rILtKrKLqELVrqID--PsesLDpDVEELLLeIAD---DFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
...++..|.++|+++. -+..+|+|+.+.|.+.++ ..+++++..+..+|..++...|+.++|.-.|++
T Consensus 178 d~~~~~~l~~iL~~~~~~~~~~~~~~~~~~ia~~~~G~~R~a~~ll~~~~~~a~~~~~~~It~~~v~~al~~ 249 (334)
T 1in4_A 178 DFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRGTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEV 249 (334)
T ss_dssp CCCCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcCCCcCHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHH
Confidence 4457778888887652 245789988777766543 245567777777777778888999999998887
No 80
>2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa}
Probab=73.37 E-value=0.88 Score=37.73 Aligned_cols=32 Identities=13% Similarity=0.199 Sum_probs=25.9
Q ss_pred HHhhhhcCCCCcchhhHHHHHhhccCcccCCCC
Q 009666 444 CSLAKHRKSDTLEAKDILVHLERNWNMTLPGFS 476 (529)
Q Consensus 444 CrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFs 476 (529)
..| .--+-|.|++-+|...||++||+.||-..
T Consensus 50 ~~l-~dLGlDSL~~veL~~~lE~~fgi~i~~~~ 81 (103)
T 2lte_A 50 SRM-EDLAFDSLVVSELSLKLRKEFGVTGVDDE 81 (103)
Confidence 344 44578899999999999999999997543
No 81
>2krk_A 26S protease regulatory subunit 8; structural genomics, northeast structural genomics consortium (NESG), target HR3102A, PSI-2; NMR {Homo sapiens}
Probab=70.58 E-value=1.8 Score=34.90 Aligned_cols=42 Identities=7% Similarity=0.098 Sum_probs=33.2
Q ss_pred HHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 426 DILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 426 ELLLeIADDF----VDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+.|.+.++.| |..|+..|+..|-.|+...|+.+|+.-.|++.
T Consensus 36 ~~LA~~T~G~SGADL~~l~~eAa~~alr~~~~~I~~~df~~Al~~v 81 (86)
T 2krk_A 36 RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 81 (86)
T ss_dssp HHHHHTCSSCCHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 3445555555 67889999999999988999999999988874
No 82
>1elk_A Target of MYB1; superhelix of helices, endocytosis/exocytosis complex; 1.50A {Homo sapiens} SCOP: a.118.9.2
Probab=70.55 E-value=11 Score=33.47 Aligned_cols=62 Identities=21% Similarity=0.402 Sum_probs=34.7
Q ss_pred cCCHHHHHH-HHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc-chhhHHHHHhhccCcccC
Q 009666 401 ILTKRSIQE-LVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTL-EAKDILVHLERNWNMTLP 473 (529)
Q Consensus 401 ILtKrKLqE-LVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTL-EvKDVQLhLERnWNI~IP 473 (529)
|-+|+-|++ |++-|.+....+.+|.+-+++|.+.|-+.. ++...+ .+.|+--.|++. |+.+|
T Consensus 93 va~~~fl~e~Lvk~~~~k~~~~~~Vk~kil~li~~W~~~f----------~~~p~l~~i~~~Y~~Lk~~-G~~FP 156 (157)
T 1elk_A 93 VASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWADAF----------RSSPDLTGVVTIYEDLRRK-GLEFP 156 (157)
T ss_dssp HTSHHHHHHHTHHHHSTTTCCCHHHHHHHHHHHHHHHHHH----------TTCTTCHHHHHHHHHHHHH-TCCCC
T ss_pred HhhHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHHHc----------CCCcchHHHHHHHHHHHHc-CCCCC
Confidence 446666667 666666555555667666666666665532 111111 255665556665 66655
No 83
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=70.37 E-value=2.2 Score=38.98 Aligned_cols=62 Identities=16% Similarity=0.191 Sum_probs=41.3
Q ss_pred CHHHHHHHHHhhCCCCCCCHHH-HHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHH
Q 009666 403 TKRSIQELVNQIDPSERLDPDV-EDILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHL 464 (529)
Q Consensus 403 tKrKLqELVrqIDPsesLDpDV-EELLLeIADDF----VDsVvs~ACrLAKHRKSdTLEvKDVQLhL 464 (529)
+.+...++++.......+++|+ .+.|.+..+.| |++++..|+.+|..++.+.|+.+||.-.|
T Consensus 211 ~~~~r~~il~~~~~~~~~~~~~~~~~la~~~~G~~~~dl~~l~~~a~~~a~~~~~~~I~~~dl~~a~ 277 (278)
T 1iy2_A 211 DVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAA 277 (278)
T ss_dssp CHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCCSBCHHHHHHHT
T ss_pred CHHHHHHHHHHHHccCCCCcccCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCCcCHHHHHHHh
Confidence 4444555555554445666655 44444444333 56889999999998888899999987655
No 84
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=68.96 E-value=2.7 Score=40.16 Aligned_cols=104 Identities=13% Similarity=0.133 Sum_probs=69.9
Q ss_pred ccCCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHH----HHhhhhcCCCCcchhhHHHHHhhccCcccCC
Q 009666 400 RILTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMFG----CSLAKHRKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 400 rILtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvs~A----CrLAKHRKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
--|+-.....+++.|. .-.++|++-.+...+=++.|+..+-... -.|+..++...|..-|.--||.|.||+.+=|
T Consensus 134 ~Wldp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~ 213 (291)
T 1pq4_A 134 IWLSPTLVKRQATTIAKELAELDPDNRDQYEANLAAFLAELERLNQELGQILQPLPQRKFIVFHPSWAYFARDYNLVQIP 213 (291)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCEEEESSCCCHHHHHHTTCEEEE
T ss_pred ccCCHHHHHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEECCchHHHHHHCCCEEee
Confidence 4567777777777773 3456788888888888888888765433 3456666666788899999999999998655
Q ss_pred CCcccccccCCCCCchHHHHHHHHHHHHHhhhhhheee
Q 009666 475 FSGDEIKTFRKPLVCDIHKERLAAVSFTLDIMCLLVIY 512 (529)
Q Consensus 475 FssDEIR~~RK~~ptEaHKQRMALIRKtiK~m~~~~~~ 512 (529)
+-..+ .|-=-++|+.|.+.||+--.-+||
T Consensus 214 ~~~~~---------~eps~~~l~~l~~~ik~~~v~~If 242 (291)
T 1pq4_A 214 IEVEG---------QEPSAQELKQLIDTAKENNLTMVF 242 (291)
T ss_dssp SCBTT---------BCCCHHHHHHHHHHHHTTTCCEEE
T ss_pred cccCC---------CCCCHHHHHHHHHHHHHcCCCEEE
Confidence 43221 222235667777777765544444
No 85
>2i5u_A DNAD domain protein; structural genomics, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG, U function; HET: MSE; 1.50A {Enterococcus faecalis} SCOP: a.275.1.1
Probab=68.65 E-value=19 Score=28.69 Aligned_cols=56 Identities=13% Similarity=0.077 Sum_probs=40.0
Q ss_pred HHHHHHhhCCCCCCCHHHHHHHHHHHHHH---------HHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 407 IQELVNQIDPSERLDPDVEDILVDIAEDF---------VESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 407 LqELVrqIDPsesLDpDVEELLLeIADDF---------VDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
|-++..+..-+ .|.+-..+.|.+..||| -.++|..||+.|..++.. ..+=|.-+|+
T Consensus 4 ~~~~~e~~g~g-~ls~~e~e~i~~w~~~~~~~~~~~~~~~elI~~A~~~av~~~~~--~~~Yi~~IL~ 68 (83)
T 2i5u_A 4 IRSIWENNGFG-LMSSKTMTDFDYWISDFEKIGASQKEAEQLIVKAIEIAIDANAR--NYNYINAILK 68 (83)
T ss_dssp HHHHHHTTTSC-SCCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTCC--SHHHHHHHHH
T ss_pred HHHHHHHhCCC-CCCHHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHcCCC--CHHHHHHHHH
Confidence 44555544334 78888888888989988 789999999999877644 4555555553
No 86
>3f9v_A Minichromosome maintenance protein MCM; replicative helicase, DNA replication, MCM complex, AAA+ Pro ATP-binding, DNA-binding, helicase; 4.35A {Sulfolobus solfataricus}
Probab=67.77 E-value=2.9 Score=43.77 Aligned_cols=47 Identities=11% Similarity=0.225 Sum_probs=39.9
Q ss_pred CCCHHHHHHHHHHHHH------------------HHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 419 RLDPDVEDILVDIAED------------------FVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 419 sLDpDVEELLLeIADD------------------FVDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
.|++++.++|.++..+ -+++++..|..+||.++++.|+.+||.-.++
T Consensus 521 ~ls~ea~~~l~~~y~~lR~~~~~~~~~~~~~s~R~l~~lirla~a~A~l~~~~~V~~~dv~~Ai~ 585 (595)
T 3f9v_A 521 KITSEAKNLITDFFVEMRKKSSETPDSPILITPRQLEALIRISEAYAKMALKAEVTREDAERAIN 585 (595)
T ss_dssp CCCCCTHHHHHHHHTTSSCSCCBCSSSCBCSSTTTTTHHHHHHHHHHHTTSSCCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhccCCCccccccHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHH
Confidence 7888888888887554 2678999999999999999999999987765
No 87
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=66.81 E-value=16 Score=32.69 Aligned_cols=68 Identities=13% Similarity=0.223 Sum_probs=45.2
Q ss_pred ccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCCCCccc
Q 009666 400 RILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGDE 479 (529)
Q Consensus 400 rILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssDE 479 (529)
.|-+|+-|++|++-+++ +.+++|.+-+++|.+.|-+.. .++. +--.++|+--.|+++ |+.+|....+.
T Consensus 90 evas~~Fl~el~~l~~~--~~~~~Vk~kil~li~~W~~~f-------~~~~--~l~~i~~~Y~~Lk~~-G~~FP~~~~~~ 157 (163)
T 1x5b_A 90 EVCSRDFATEVRAVIKN--KAHPKVCEKLKSLMVEWSEEF-------QKDP--QFSLISATIKSMKEE-GITFPPAGSQT 157 (163)
T ss_dssp HHTSHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHHT-------TTCS--TTHHHHHHHHHHHTT-TCCCCCCSSCC
T ss_pred HHhhHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHh-------cCCc--ccHHHHHHHHHHHHc-CCCCCCCCCCC
Confidence 34467888888887753 467888888888887776542 1222 111367777777776 88888876654
No 88
>1bh9_A TAFII18; histone fold, tata binding protein, transcription regulation complex; HET: PMB; 2.60A {Homo sapiens} SCOP: a.22.1.3 PDB: 1bh8_A*
Probab=66.79 E-value=18 Score=26.98 Aligned_cols=41 Identities=17% Similarity=0.284 Sum_probs=35.4
Q ss_pred HHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 009666 405 RSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCS 445 (529)
Q Consensus 405 rKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACr 445 (529)
+.|+.|+--.+-...-.+|..++|=||.-+||.+++..|++
T Consensus 4 ~ei~~mMy~fGD~~~P~~ETv~llEeiV~~~i~~l~~~A~~ 44 (45)
T 1bh9_A 4 KELRCMMYGFGDDQNPYTESVDILEDLVIEFITEMTHKAMS 44 (45)
T ss_dssp HHHHHHHHHTTSCSSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45888888877767777888999999999999999999986
No 89
>1wwi_A Hypothetical protein TTHA1479; structural genomics, unknown function, riken structural genomics/proteomics initiative, RSGI; 1.58A {Thermus thermophilus HB8} SCOP: a.22.1.4 PDB: 1wws_A
Probab=65.70 E-value=11 Score=34.61 Aligned_cols=59 Identities=14% Similarity=0.127 Sum_probs=50.9
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhH
Q 009666 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDI 460 (529)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDV 460 (529)
|++=.++++|.|.. .+.-+|++=.+-+.|++++=+.|.+..|-+-||..+.++|+..|+
T Consensus 2 vm~~~~~e~lFR~a-a~LdvdK~d~~r~~d~V~~Kl~DLl~va~~~Ak~n~RdvI~~~DL 60 (148)
T 1wwi_A 2 LMKVAEFERLFRQA-AGLDVDKNDLKRVSDFLRNKLYDLLAVAERNAKYNGRDLIFEPDL 60 (148)
T ss_dssp CSCHHHHHHHHHHH-HCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECGGGS
T ss_pred cCCHHHHHHHHHHH-hccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccccC
Confidence 46667899999986 456677777777889999999999999999999999999998886
No 90
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=65.56 E-value=4.5 Score=38.32 Aligned_cols=106 Identities=13% Similarity=0.207 Sum_probs=68.1
Q ss_pred ccCCHHHHHHHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHHHH----HHhhhhcCCCCcchhhHHHHHhhccCcccCC
Q 009666 400 RILTKRSIQELVNQI-DPSERLDPDVEDILVDIAEDFVESITMFG----CSLAKHRKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 400 rILtKrKLqELVrqI-DPsesLDpDVEELLLeIADDFVDsVvs~A----CrLAKHRKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
--|+-.....+++.| |.-.++|++-.+...+=++.|+..+-... -+|++.++...|...|.--||.|.||+.+=|
T Consensus 121 ~Wldp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~ 200 (284)
T 3cx3_A 121 TWLDPEKAGEEAQIIADKLSEVDSEHKETYQKNAQAFIKKAQELTKKFQPKFEKATQKTFVTQHTAFSYLAKRFGLNQLG 200 (284)
T ss_dssp GGGSHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCEEEEESCCHHHHHHTTCCEEE
T ss_pred cccCHHHHHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCchHHHHHHcCCEEee
Confidence 456777777777776 33346777877777777788877665433 3466666777888999999999999998644
Q ss_pred CCcccccccCCCCCchHHHHHHHHHHHHHhhhhhheee
Q 009666 475 FSGDEIKTFRKPLVCDIHKERLAAVSFTLDIMCLLVIY 512 (529)
Q Consensus 475 FssDEIR~~RK~~ptEaHKQRMALIRKtiK~m~~~~~~ 512 (529)
+-. +.+-.. ++ -++|+.|.+.||+--.-+||
T Consensus 201 ~~~--~~~~~e--ps---~~~l~~l~~~ik~~~v~~if 231 (284)
T 3cx3_A 201 IAG--ISPEQE--PS---PRQLTEIQEFVKTYKVKTIF 231 (284)
T ss_dssp EEC--SSTTCC--CC---SHHHHHHHHHHHHTTCCCEE
T ss_pred ccC--CCCCCC--CC---HHHHHHHHHHHHHcCCCEEE
Confidence 321 111111 22 24566666777665544444
No 91
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=65.49 E-value=10 Score=31.40 Aligned_cols=59 Identities=17% Similarity=0.174 Sum_probs=39.4
Q ss_pred CCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHH---HHHHHHHHHhhhhcCCCCcchhhHHHHH
Q 009666 402 LTKRSIQELVNQID--PSERLDPDVEDILVDIAEDFV---ESITMFGCSLAKHRKSDTLEAKDILVHL 464 (529)
Q Consensus 402 LtKrKLqELVrqID--PsesLDpDVEELLLeIADDFV---DsVvs~ACrLAKHRKSdTLEvKDVQLhL 464 (529)
+++..+.++++.+- .+..+++++.+.|.+.++-.+ .+++..++.++ .+.|+.+||.-.|
T Consensus 185 l~~~e~~~~l~~~~~~~~~~~~~~~~~~l~~~~~G~~~~~~~~~~~~~~~~----~~~i~~~~v~~~~ 248 (250)
T 1njg_A 185 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG----DGQVSTQAVSAML 248 (250)
T ss_dssp CCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHTTCHHHHHHHHHHHHTTT----TSSBCHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhcc----CceecHHHHHHHh
Confidence 56777888877652 345789999888888887544 44444554433 2378889886554
No 92
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=65.27 E-value=4.5 Score=38.22 Aligned_cols=107 Identities=16% Similarity=0.125 Sum_probs=70.4
Q ss_pred ccCCHHHHHHHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHHH----HHHhhhhcCCCCcchhhHHHHHhhccCcccCC
Q 009666 400 RILTKRSIQELVNQI-DPSERLDPDVEDILVDIAEDFVESITMF----GCSLAKHRKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 400 rILtKrKLqELVrqI-DPsesLDpDVEELLLeIADDFVDsVvs~----ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
--|+-.....+++.| |.-.++|++-.+...+=+++|+..+-.. .-+|++.++...|...|.--||.|.||+.+-|
T Consensus 118 ~Wldp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~ 197 (284)
T 2prs_A 118 LWLSPEIARATAVAIHGKLVELMPQSRAKLDANLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFGLTPLG 197 (284)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTCCEEEEESCCHHHHHHHTCCCCE
T ss_pred ccCCHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEECccHHHHHHHCCCeEeE
Confidence 356777777777777 3345678887777777788888766543 33566666777888999999999999998644
Q ss_pred CCcccccccCCCCCchHHHHHHHHHHHHHhhhhhheeee
Q 009666 475 FSGDEIKTFRKPLVCDIHKERLAAVSFTLDIMCLLVIYK 513 (529)
Q Consensus 475 FssDEIR~~RK~~ptEaHKQRMALIRKtiK~m~~~~~~~ 513 (529)
+- ++.+- .|-=-++|+.|.+.||+--.-+||-
T Consensus 198 ~~--~~~~~-----~eps~~~l~~l~~~ik~~~v~~if~ 229 (284)
T 2prs_A 198 HF--TVNPE-----IQPGAQRLHEIRTQLVEQKATCVFA 229 (284)
T ss_dssp EE--ESSTT-----SCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred ee--ccCCC-----CCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 32 11111 1122356777777777765555543
No 93
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=65.25 E-value=3.2 Score=40.18 Aligned_cols=106 Identities=15% Similarity=0.207 Sum_probs=66.9
Q ss_pred ccCCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHH----HHhhhhcCCCCcchhhHHHHHhhccCcccCC
Q 009666 400 RILTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMFG----CSLAKHRKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 400 rILtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvs~A----CrLAKHRKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
--|+-.....+++.|. .-.++|++-.+...+=++.|+..+-... -+|++.++...|...|.--||.|.||+.+=|
T Consensus 134 vWldp~n~~~~a~~I~~~L~~~DP~~a~~Y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yfa~~yGl~~~~ 213 (312)
T 2o1e_A 134 VWLSPVLAQKEVKNITAQIVKQDPDNKEYYEKNSKEYIAKLQDLDKLYRTTAKKAEKKEFITQHTAFGYLAKEYGLKQVP 213 (312)
T ss_dssp GGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCCEEEESSCTTHHHHHHTTCEEEE
T ss_pred cccCHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEECCchHHHHHHCCCeEEE
Confidence 4566777777777773 3346788877778888888887765433 3466666667788999999999999998654
Q ss_pred CCcccccccCCCCCchHHHHHHHHHHHHHhhhhhheee
Q 009666 475 FSGDEIKTFRKPLVCDIHKERLAAVSFTLDIMCLLVIY 512 (529)
Q Consensus 475 FssDEIR~~RK~~ptEaHKQRMALIRKtiK~m~~~~~~ 512 (529)
+.. +.+ ..|.=-++|+.|.+.||+--.-+||
T Consensus 214 ~~~--~~~-----~~eps~~~l~~l~~~ik~~~v~~If 244 (312)
T 2o1e_A 214 IAG--LSP-----DQEPSAASLAKLKTYAKEHNVKVIY 244 (312)
T ss_dssp CSS--CCS-----SSCCCHHHHHHHHHHTTSSCCCEEE
T ss_pred eec--cCC-----CCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 422 111 0111234555566655554444443
No 94
>3h7c_X Agmatine deiminase; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; HET: MSE 211 1PE; 1.50A {Arabidopsis thaliana} SCOP: d.126.1.6 PDB: 1vkp_A* 2q3u_A* 3h7k_A*
Probab=64.53 E-value=2.7 Score=43.07 Aligned_cols=69 Identities=25% Similarity=0.275 Sum_probs=53.4
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhhccC----cccC-CCCccc-----ccccCC------------CCCchHHHHHH
Q 009666 439 ITMFGCSLAKHRKSDTLEAKDILVHLERNWN----MTLP-GFSGDE-----IKTFRK------------PLVCDIHKERL 496 (529)
Q Consensus 439 Vvs~ACrLAKHRKSdTLEvKDVQLhLERnWN----I~IP-GFssDE-----IR~~RK------------~~ptEaHKQRM 496 (529)
+++..|.|-++|+-. |.-.+|.-.|++.+| |||| |+..|| |..+-| ..+.+.|-+++
T Consensus 175 ltTe~cLLn~nRNP~-lsk~eIE~~L~~~LGv~kvIWL~~Gl~gDddTdgHID~larFv~pg~Vl~~~~~d~~dp~y~~~ 253 (383)
T 3h7c_X 175 LVTEECLLNKNRNPH-MSKEQIEEELKKYLGVQSFIWLPRGLYGDEDTNGHIDNMCCFARPGVVLLSWTDDETDPQYERS 253 (383)
T ss_dssp EEEHHHHTCTTTCTT-SCHHHHHHHHHHHHCCCEEEEESCCCTTCGGGTCCGGGTEEEEETTEEEEEECCCTTSHHHHHH
T ss_pred EEEhhhccCCCCCCC-CCHHHHHHHHHHHhCCcEEEEeCCCcCCCCCcCcceeeeEEecCCCEEEEEccCCCCCcCHHHH
Confidence 457889999999987 789999999999999 5789 877763 222211 23456788999
Q ss_pred HHHHHHHhhhhh
Q 009666 497 AAVSFTLDIMCL 508 (529)
Q Consensus 497 ALIRKtiK~m~~ 508 (529)
..+.+.|++++.
T Consensus 254 ~~~~~~L~~~td 265 (383)
T 3h7c_X 254 VEALSVLSNSID 265 (383)
T ss_dssp HHHHHHHHTCBC
T ss_pred HHHHHHHHhhhh
Confidence 999999999873
No 95
>3f8t_A Predicted ATPase involved in replication control, CDC46/MCM family; helicase, MCM homolog, DNA replication, ATP-binding, DNA-binding; 1.90A {Methanopyrus kandleri AV19}
Probab=64.47 E-value=11 Score=40.04 Aligned_cols=68 Identities=19% Similarity=0.222 Sum_probs=51.3
Q ss_pred CCccCCHHHHHHHHHhhC---CCCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHhhhhcCCC
Q 009666 398 GNRILTKRSIQELVNQID---PSERLDPDVEDILVDIAEDF---------------------VESITMFGCSLAKHRKSD 453 (529)
Q Consensus 398 ~nrILtKrKLqELVrqID---PsesLDpDVEELLLeIADDF---------------------VDsVvs~ACrLAKHRKSd 453 (529)
...+++...|.+++..+. -.-.|++++++.|.++..+- ++.++..|-.+||.|+++
T Consensus 390 ~~~~ls~e~L~~yi~~ar~~~~~p~ls~ea~~yI~~~y~~tR~~~~~~~~~~~~~~giSpR~leaLiRlA~A~A~L~gR~ 469 (506)
T 3f8t_A 390 DTEVPSYTLLRRYLLYAIREHPAPELTEEARKRLEHWYETRREEVEERLGMGLPTLPVTRRQLESVERLAKAHARMRLSD 469 (506)
T ss_dssp ----CCHHHHHHHHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHHHHHTTCS
T ss_pred cCCCCCHHHHHHHHHHHHhcCCCceeCHHHHHHHHHHHHHHhcCcccccccccccccccHHHHHHHHHHHHHHHHHcCcC
Confidence 446888888888777654 25689999999999885543 235778888999999999
Q ss_pred CcchhhHHHHHh
Q 009666 454 TLEAKDILVHLE 465 (529)
Q Consensus 454 TLEvKDVQLhLE 465 (529)
.|+.+||+..++
T Consensus 470 ~V~~eDV~~Ai~ 481 (506)
T 3f8t_A 470 DVEPEDVDIAAE 481 (506)
T ss_dssp EECHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 999999976654
No 96
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=63.20 E-value=33 Score=29.15 Aligned_cols=69 Identities=14% Similarity=0.195 Sum_probs=42.2
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH---------HHHHHHHH----------HHHHHHhhhhcCCCCc
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI---------AEDFVESI----------TMFGCSLAKHRKSDTL 455 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI---------ADDFVDsV----------vs~ACrLAKHRKSdTL 455 (529)
+.+++..|++..|.++++.++-. +++++++++..+ .+||+.-+ +..+.+..-.-+...|
T Consensus 62 D~d~~G~i~~~El~~~l~~~g~~--~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I 139 (191)
T 3k21_A 62 DEDGKGYITKEQLKKGLEKDGLK--LPYNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKLIYCAFRVFDVDNDGEI 139 (191)
T ss_dssp CTTCSSEECHHHHHHHHHHTTCC--CCTTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGGCCHHHHHHHHHHHSTTCSSCB
T ss_pred CCCCCCCCcHHHHHHHHHHcCCC--cHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhhccHHHHHHHHHHhCCCCCCcC
Confidence 45677789999999999988544 336666666554 25676543 3334444434444556
Q ss_pred chhhHHHHHh
Q 009666 456 EAKDILVHLE 465 (529)
Q Consensus 456 EvKDVQLhLE 465 (529)
+..++.-.|.
T Consensus 140 s~~El~~~l~ 149 (191)
T 3k21_A 140 TTAELAHILY 149 (191)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6666655554
No 97
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=62.15 E-value=21 Score=30.92 Aligned_cols=73 Identities=14% Similarity=0.124 Sum_probs=46.5
Q ss_pred CCCCcCCccCCHHHHHHHHHhhCC----CCCCCHH-HHHHHHHHH----------HHHHHH-----HHHHHHHhhhhcCC
Q 009666 393 ESDEFGNRILTKRSIQELVNQIDP----SERLDPD-VEDILVDIA----------EDFVES-----ITMFGCSLAKHRKS 452 (529)
Q Consensus 393 ~~~e~~nrILtKrKLqELVrqIDP----sesLDpD-VEELLLeIA----------DDFVDs-----Vvs~ACrLAKHRKS 452 (529)
.+..+++..|++..|..+++.+.. ...++++ |++++ ..+ +||+.- -+..+.++.- .++
T Consensus 12 ~~~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~-~~~D~d~~G~I~f~EF~~~~~~~~~l~~aF~~fD-d~~ 89 (174)
T 2i7a_A 12 SGLVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLV-ALMELKVNGRLDQEEFARLWKRLVHYQHVFQKVQ-TSP 89 (174)
T ss_dssp CCSCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHH-HHHCSSCSSEECHHHHHHHHHHHHHHHHHHHHHC-SBT
T ss_pred cccCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHH-HHHCCCCCCcCCHHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 344556667888888888888732 2344444 44443 333 356642 3456777777 788
Q ss_pred CCcchhhHHHHHhhc
Q 009666 453 DTLEAKDILVHLERN 467 (529)
Q Consensus 453 dTLEvKDVQLhLERn 467 (529)
..|+.+++.-+|+..
T Consensus 90 G~I~~~El~~~l~~l 104 (174)
T 2i7a_A 90 GVLLSSDLWKAIENT 104 (174)
T ss_dssp TBEEGGGHHHHHHTC
T ss_pred CcCCHHHHHHHHHHh
Confidence 899999999888764
No 98
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=61.88 E-value=3.5 Score=38.75 Aligned_cols=59 Identities=8% Similarity=-0.001 Sum_probs=38.0
Q ss_pred CCHHHHHHHHHhhCC--CCCCCHHHHHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhH
Q 009666 402 LTKRSIQELVNQIDP--SERLDPDVEDILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDI 460 (529)
Q Consensus 402 LtKrKLqELVrqIDP--sesLDpDVEELLLeIADDF----VDsVvs~ACrLAKHRKSdTLEvKDV 460 (529)
.+.+...++++.+-. ...++++..+.|.+.++.| |+.++..|+..|..|..+.++.++|
T Consensus 184 p~~~~r~~il~~~~~~~~~~~~~~~l~~la~~t~g~sg~di~~l~~~a~~~a~r~~~~~~~~~~~ 248 (322)
T 3eie_A 184 PDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDV 248 (322)
T ss_dssp CCHHHHHHHHHHHHTTCCCCCCHHHHHHHHHTTTTCCHHHHHHHHHHHTTHHHHHHHHCEEEEEC
T ss_pred CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence 355556666665422 3357888888888877764 6677777777777776555444444
No 99
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=61.42 E-value=7.5 Score=34.81 Aligned_cols=50 Identities=8% Similarity=-0.002 Sum_probs=32.2
Q ss_pred CCCCHHHHHHHHHHHHH-----------HHHHHHHHHHH-----hhhhcCCC-CcchhhHHHHHhhc
Q 009666 418 ERLDPDVEDILVDIAED-----------FVESITMFGCS-----LAKHRKSD-TLEAKDILVHLERN 467 (529)
Q Consensus 418 esLDpDVEELLLeIADD-----------FVDsVvs~ACr-----LAKHRKSd-TLEvKDVQLhLERn 467 (529)
..||+++.+.|.+.+.. .+.++++.++. ++...+.. +|+.+||.-+|++.
T Consensus 233 ~~~~~~a~~~l~~~~~~~~~~~~~g~~R~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~~~l~~~ 299 (310)
T 1ofh_A 233 IAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEV 299 (310)
T ss_dssp EEECHHHHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHSHHHHHHGGGCTTCEEEECHHHHHHHTCSS
T ss_pred eccCHHHHHHHHHHhhhhcccccccCcHHHHHHHHHHHHhhhcCCccccCCEEEEeeHHHHHHHHhh
Confidence 46899999999988843 25556666553 22222222 48888888877753
No 100
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=61.06 E-value=41 Score=26.90 Aligned_cols=28 Identities=7% Similarity=0.031 Sum_probs=17.5
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 439 ITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 439 Vvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
.+..+.++.-..+...|+..|+.-.|..
T Consensus 100 ~~~~~F~~~D~d~~G~i~~~e~~~~l~~ 127 (166)
T 2aao_A 100 HLFAAFTYFDKDGSGYITPDELQQACEE 127 (166)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHTCC
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 3445555555556667777777766653
No 101
>2lse_A Four helix bundle protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=65.13 E-value=1.8 Score=36.92 Aligned_cols=81 Identities=22% Similarity=0.200 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCc-ccCCCCcccccccCCCCCchHHHHHHHHHHHHHhhhh
Q 009666 429 VDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNM-TLPGFSGDEIKTFRKPLVCDIHKERLAAVSFTLDIMC 507 (529)
Q Consensus 429 LeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI-~IPGFssDEIR~~RK~~ptEaHKQRMALIRKtiK~m~ 507 (529)
|+-.+..+|.|+..|-.-|+.|-.. | +|||+-.||.--.- .|-.| .||..-.-|-.++..-.+-+..|.|.+|++.
T Consensus 9 leklekildevtdgapdeareriek-l-akdvkdeleegdaknmiekf-rdemeqmykdapnavmeqlleeiekllkkag 85 (101)
T 2lse_A 9 LEKLEKILDEVTDGAPDEARERIEK-L-AKDVKDELEEGDAKNMIEKF-RDEMEQMYKDAPNAVMEQLLEEIEKLLKKAG 85 (101)
Confidence 3334445555566666556555433 2 55665555542111 12233 3444444566777777888999999999999
Q ss_pred hheee
Q 009666 508 LLVIY 512 (529)
Q Consensus 508 ~~~~~ 512 (529)
.||-.
T Consensus 86 slvpr 90 (101)
T 2lse_A 86 SLVPR 90 (101)
Confidence 88853
No 102
>2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum}
Probab=60.61 E-value=2.9 Score=32.42 Aligned_cols=31 Identities=26% Similarity=0.488 Sum_probs=24.8
Q ss_pred HHhhhhcCCCCcchhhHHHHHhhccCcccCC
Q 009666 444 CSLAKHRKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 444 CrLAKHRKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
..|-..-+-|.|++-++...||++||+.|+-
T Consensus 35 ~~l~~dlglDSl~~vel~~~lE~~fgi~i~~ 65 (88)
T 2l4b_A 35 TNLAKDFNLDSLDFVDLIMSLEERFSLEISD 65 (88)
T ss_dssp SCTTTTTTCCHHHHHHHHHHHHHHTTCCCCH
T ss_pred CchhhccCCcHHHHHHHHHHHHHHHCCCcCH
Confidence 3443456778889999999999999999874
No 103
>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}
Probab=60.45 E-value=2.5 Score=32.34 Aligned_cols=28 Identities=21% Similarity=0.417 Sum_probs=23.6
Q ss_pred hhcCCCCcchhhHHHHHhhccCcccCCC
Q 009666 448 KHRKSDTLEAKDILVHLERNWNMTLPGF 475 (529)
Q Consensus 448 KHRKSdTLEvKDVQLhLERnWNI~IPGF 475 (529)
..-+-|.|++-++...||++||+.||-.
T Consensus 37 ~dlG~DSl~~vel~~~le~~fgi~i~~~ 64 (84)
T 2kwl_A 37 EDLNADSLDIYELLYLLEEAFDDKIPEN 64 (84)
T ss_dssp HTSSSCHHHHHHHHHHHHHHHTCCTTTT
T ss_pred hhcCCCHHHHHHHHHHHHHHHCCCcCHH
Confidence 3457788899999999999999998743
No 104
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=60.35 E-value=7.9 Score=35.10 Aligned_cols=66 Identities=15% Similarity=0.209 Sum_probs=42.9
Q ss_pred CHHHHHHHHHhh--CCCCCCCHHHHHHHHHHHH-----------HHHHHHHHHHHHhhhhc----CCCCcchhhHHHHHh
Q 009666 403 TKRSIQELVNQI--DPSERLDPDVEDILVDIAE-----------DFVESITMFGCSLAKHR----KSDTLEAKDILVHLE 465 (529)
Q Consensus 403 tKrKLqELVrqI--DPsesLDpDVEELLLeIAD-----------DFVDsVvs~ACrLAKHR----KSdTLEvKDVQLhLE 465 (529)
+...+.++++.+ ..+..+++++.+.|.++++ ..+.++++.+|..+..| +.+.++..|+.....
T Consensus 205 ~~~~~~~il~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~gn~r~l~~~l~~a~~~~~~r~~~~~~~~~~~~~l~~i~~ 284 (309)
T 3syl_A 205 SDEELFEIAGHMLDDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDARALSTIAE 284 (309)
T ss_dssp CHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHHHHHC---CEEHHHHHEECH
T ss_pred CHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHhhccH
Confidence 445666666544 2356899999999998854 35667888888766655 456678888865554
Q ss_pred hcc
Q 009666 466 RNW 468 (529)
Q Consensus 466 RnW 468 (529)
..|
T Consensus 285 ~d~ 287 (309)
T 3syl_A 285 EDI 287 (309)
T ss_dssp HHH
T ss_pred HHh
Confidence 444
No 105
>2p62_A Hypothetical protein PH0156; structural genomics, pyrococcu horikoshii OT3, PSI, protein structure initiative; 2.50A {Pyrococcus horikoshii} SCOP: e.67.1.1
Probab=59.53 E-value=2.2 Score=41.76 Aligned_cols=81 Identities=23% Similarity=0.194 Sum_probs=43.1
Q ss_pred CCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcc---cCCCCcccccccCCCCC
Q 009666 417 SERLDPDVEDILVDIAED-----FVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMT---LPGFSGDEIKTFRKPLV 488 (529)
Q Consensus 417 sesLDpDVEELLLeIADD-----FVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~---IPGFssDEIR~~RK~~p 488 (529)
......++||++++++++ -|++.+...|. -....|+-|||.+.+--.+|.| +-|| |++...
T Consensus 145 ~~~~kg~LEDl~l~lve~~~~l~kv~~~i~~L~~----d~~rklkpK~vmyla~~a~~~~g~~l~gl-------Ye~fi~ 213 (241)
T 2p62_A 145 FVKEKKELELSLAYLAKLDGILEKYRGSMRALSQ----DKGDKLTPKDVMHILSIANDYTGDCLSGL-------YEKYIG 213 (241)
T ss_dssp TBCCCCSHHHHHHHHHHHTTHHHHCSHHHHHHHH----HHTSCBCHHHHHHHHHHHTTCCSSBHHHH-------HHHHHH
T ss_pred CccccchHHHHHHHHHhhccHHHHHHHHHHHHHH----HhhhccCHHHHHHHHHHHhcCCCchHHHH-------HHHHHH
Confidence 444445677777777653 12222222222 2234588999955544444433 3333 555555
Q ss_pred chHHHHHHHHHHHHHhhhhhh
Q 009666 489 CDIHKERLAAVSFTLDIMCLL 509 (529)
Q Consensus 489 tEaHKQRMALIRKtiK~m~~~ 509 (529)
--.|+.| .++.+-+++.+|+
T Consensus 214 ~~~~~n~-~~~~~~l~~~~l~ 233 (241)
T 2p62_A 214 IMIHRNR-ELLIRFLSEVNLL 233 (241)
T ss_dssp HHHHHCH-HHHHHHHHHTTCH
T ss_pred HHHhhhH-HHHHHHHHHhhhH
Confidence 4555444 3466777777775
No 106
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=58.87 E-value=4.1 Score=42.26 Aligned_cols=65 Identities=17% Similarity=0.209 Sum_probs=47.1
Q ss_pred CHHHHHHHHHhhCCCCCCCHHH-HHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 403 TKRSIQELVNQIDPSERLDPDV-EDILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 403 tKrKLqELVrqIDPsesLDpDV-EELLLeIADDF----VDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+.+...++++..-.+..+++|| .++|.+..+-| ++++++.|+.+|..++.+.|+.+|+.-.|++-
T Consensus 202 d~~~R~~IL~~~~~~~~l~~dv~l~~lA~~t~G~~gadL~~lv~~Aa~~A~~~~~~~It~~dl~~al~~v 271 (499)
T 2dhr_A 202 DVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRV 271 (499)
T ss_dssp CHHHHHHHHHHTTSSSCCCCSSTTHHHHTTSCSCCHHHHHHHHHHHHHHHTTTCCSSCCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCChHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCccCHHHHHHHHHHH
Confidence 4445556666655556677766 45555544433 57899999999998888899999999999874
No 107
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=57.98 E-value=14 Score=38.08 Aligned_cols=60 Identities=20% Similarity=0.299 Sum_probs=40.4
Q ss_pred HHHHHhhCCCCCCCHHH-HHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 408 QELVNQIDPSERLDPDV-EDILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 408 qELVrqIDPsesLDpDV-EELLLeIADDF----VDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
.++++..-....+++++ .+.|.+....| |+++++.|+.+|..++.+.|+.+|+.-.|++.
T Consensus 192 ~~Il~~~~~~~~l~~~v~l~~la~~t~G~sgadL~~lv~~Aal~A~~~~~~~I~~~dl~~al~~v 256 (476)
T 2ce7_A 192 KKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRV 256 (476)
T ss_dssp HHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcchhhHHHHHHhcCCCcHHHHHHHHHHHHHHHHHcCCCeecHHHHHHHHHHH
Confidence 34444332333455444 34444443333 57889999999999998999999999999885
No 108
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=56.78 E-value=1.3 Score=39.65 Aligned_cols=63 Identities=14% Similarity=0.118 Sum_probs=38.7
Q ss_pred HHHHHHHHHhhCCCCCCCHHH-HHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 404 KRSIQELVNQIDPSERLDPDV-EDILVDIAED----FVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 404 KrKLqELVrqIDPsesLDpDV-EELLLeIADD----FVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
.+...++++..-....+++++ .+.|.++++. -|.+++..|+.+|..++.+.|+.+||.-.|++
T Consensus 185 ~~~r~~il~~~~~~~~~~~~~~~~~la~~~~g~~g~dl~~l~~~a~~~a~~~~~~~i~~~~~~~a~~~ 252 (268)
T 2r62_A 185 FNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVER 252 (268)
T ss_dssp TTTHHHHHHHHTSSSCCCSSCCTTTTTSSSCSSCHHHHHHHHHHHHHTTSSSCCCSCCHHHHHTSCTT
T ss_pred HHHHHHHHHHHHhcCCCCCccCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccCCcCHHHHHHHHHH
Confidence 333444444443333333332 2334444433 37789999999999988889999998665554
No 109
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=56.75 E-value=23 Score=27.00 Aligned_cols=65 Identities=11% Similarity=0.082 Sum_probs=42.7
Q ss_pred CCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 402 LTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 402 LtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+++..|.+|++.+|.+..|+-+---.++.+..+ -...+..+.++.-..+...|+.+|+.-.|.+.
T Consensus 6 ~~~~e~~~l~~~~d~~g~i~~~eF~~~~~~~~~-~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 70 (108)
T 2pvb_A 6 LKDADVAAALAACSAADSFKHKEFFAKVGLASK-SLDDVKKAFYVIDQDKSGFIEEDELKLFLQNF 70 (108)
T ss_dssp SCHHHHHHHHHHTCSTTCCCHHHHHHHHTGGGS-CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT
T ss_pred CCHHHHHHHHHHhCCCCcCcHHHHHHHHhCChh-HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 789999999999997777775422222221111 13345566666666677788999988777653
No 110
>1r4v_A Hypothetical protein AQ_328; structural genomics, all-alpha, histon fold, PSI, protein ST initiative, midwest center for structural genomics; HET: MSE; 1.90A {Aquifex aeolicus} SCOP: a.22.1.4
Probab=56.74 E-value=14 Score=34.64 Aligned_cols=61 Identities=10% Similarity=0.044 Sum_probs=54.7
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhH
Q 009666 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDI 460 (529)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDV 460 (529)
..|++=.+|++|.|.. .+.-+|++=.+-+.|++++=+.|++..|-+-||..+.++|+..|+
T Consensus 24 m~vmg~~kferlFR~a-agLDvdK~d~kr~~d~V~~Kl~DLl~va~~~Ak~NgRDvI~~~DL 84 (171)
T 1r4v_A 24 LRPKGFDKLDHYFRTE-LDIDLTDETIELLLNSVKAAFGKLFYGAEQRARWNGRDFIALADL 84 (171)
T ss_dssp TSCTTHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHTTTTHHHHHHHTTCSEECGGGS
T ss_pred HhcCChHHHHHHHHHH-hccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccccC
Confidence 6699999999999986 557788887788899999999999999999999999999998886
No 111
>3hvm_A Agmatine deiminase; hydrolase; 2.10A {Helicobacter pylori} SCOP: d.126.1.6 PDB: 2cmu_A
Probab=56.19 E-value=4.1 Score=40.89 Aligned_cols=68 Identities=24% Similarity=0.307 Sum_probs=51.7
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhhccC----cccC-C-CCcccc----cccC------------CCCCchHHHHHH
Q 009666 439 ITMFGCSLAKHRKSDTLEAKDILVHLERNWN----MTLP-G-FSGDEI----KTFR------------KPLVCDIHKERL 496 (529)
Q Consensus 439 Vvs~ACrLAKHRKSdTLEvKDVQLhLERnWN----I~IP-G-FssDEI----R~~R------------K~~ptEaHKQRM 496 (529)
+++..|.|-++|+-. |.-.+|+-.|++.+| |||| | +..||- ..+- -..+.+.|-+++
T Consensus 153 ltTe~clLn~nRNP~-lsk~eiE~~L~~~LGv~kviWL~~G~l~~DdTdgHID~larFv~p~~v~~~~~~d~~d~~y~~~ 231 (330)
T 3hvm_A 153 LTNTQCLLEKNRNPH-LNQNGIETMLKKELGAKQVLWYSYGYLKGDDTDSHTDTLARFLDKDTIVYSACEDKNDEHYTAL 231 (330)
T ss_dssp EEEHHHHTCTTTSTT-SCHHHHHHHHHHHHCCSEEEEECCCCCTTCCSSCCGGGTEEEEETTEEEEEECCCTTSTTHHHH
T ss_pred EEEeehhcCCCCCCC-CCHHHHHHHHHHHhCCCEEEEECCCCcCCCCCCccchheeEecCCCEEEEEcCCCCCCccHHHH
Confidence 457889999999987 789999999999999 5788 7 566642 1111 123456677899
Q ss_pred HHHHHHHhhhh
Q 009666 497 AAVSFTLDIMC 507 (529)
Q Consensus 497 ALIRKtiK~m~ 507 (529)
..+.+.|++++
T Consensus 232 ~~~~~~L~~~~ 242 (330)
T 3hvm_A 232 KKMQEELKTFK 242 (330)
T ss_dssp HHHHHHHHHCB
T ss_pred HHHHHHHHhhh
Confidence 99999999986
No 112
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=55.94 E-value=9.8 Score=35.17 Aligned_cols=65 Identities=5% Similarity=0.018 Sum_probs=48.9
Q ss_pred CCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHH---HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 402 LTKRSIQELVNQID--PSERLDPDVEDILVDIAED---FVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 402 LtKrKLqELVrqID--PsesLDpDVEELLLeIADD---FVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
++.+.+.++++.+. -+..+++++.+.|.+...- .+.+++..++.+|..++.+.|+..||.-.+++
T Consensus 184 ~~~~e~~~il~~~~~~~~~~~~~~~~~~l~~~~~G~~r~l~~~l~~~~~~a~~~~~~~i~~~~~~~~~~~ 253 (338)
T 3pfi_A 184 YKDSELALILQKAALKLNKTCEEKAALEIAKRSRSTPRIALRLLKRVRDFADVNDEEIITEKRANEALNS 253 (338)
T ss_dssp CCHHHHHHHHHHHHHHTTCEECHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHH
Confidence 35666777776653 2356889998888875443 46678888888998888899999999888876
No 113
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=55.65 E-value=78 Score=25.32 Aligned_cols=70 Identities=14% Similarity=0.272 Sum_probs=39.4
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHH-HHHHHHHH---------HHHHHHHH------------HHHHHHhhhhcCC
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPD-VEDILVDI---------AEDFVESI------------TMFGCSLAKHRKS 452 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpD-VEELLLeI---------ADDFVDsV------------vs~ACrLAKHRKS 452 (529)
+.+++..|++..|..+++.++. .++++ +++++..+ -+||+.-+ +..+++..-..+.
T Consensus 38 D~d~~G~i~~~el~~~l~~~~~--~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~ 115 (169)
T 3qrx_A 38 DTDGSGTIDAKELKVAMRALGF--EPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNS 115 (169)
T ss_dssp CTTCCSEECHHHHHHHHHHTSC--CCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCS
T ss_pred CCCCCCcCcHHHHHHHHHHcCC--CCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHHHHhCCCCC
Confidence 3455667777777777776642 23333 33333322 23555443 3344555555566
Q ss_pred CCcchhhHHHHHhh
Q 009666 453 DTLEAKDILVHLER 466 (529)
Q Consensus 453 dTLEvKDVQLhLER 466 (529)
..|+..++.-.|+.
T Consensus 116 G~i~~~el~~~l~~ 129 (169)
T 3qrx_A 116 GTITIKDLRRVAKE 129 (169)
T ss_dssp SSBCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHH
Confidence 77888888777764
No 114
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=55.62 E-value=52 Score=27.49 Aligned_cols=48 Identities=13% Similarity=0.382 Sum_probs=29.4
Q ss_pred cCCc-cCCHHHHHHHHHh-hC--CCCCC-CHHHHHHHHHH---------HHHHHHHHHHHHH
Q 009666 397 FGNR-ILTKRSIQELVNQ-ID--PSERL-DPDVEDILVDI---------AEDFVESITMFGC 444 (529)
Q Consensus 397 ~~nr-ILtKrKLqELVrq-ID--PsesL-DpDVEELLLeI---------ADDFVDsVvs~AC 444 (529)
+++. .|++..|.++++. +. -+..+ +++|+++|.++ -+|||.-+...++
T Consensus 35 dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~~~ 96 (113)
T 2lnk_A 35 EGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIAM 96 (113)
T ss_dssp TSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHHHH
T ss_pred CCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHHH
Confidence 4443 7899999999985 21 01233 45677766655 3478776655444
No 115
>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A
Probab=54.82 E-value=3.2 Score=32.11 Aligned_cols=29 Identities=17% Similarity=0.338 Sum_probs=22.9
Q ss_pred hhhhcCCCCcchhhHHHHHhhccCcccCC
Q 009666 446 LAKHRKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 446 LAKHRKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
|...-+-+.|++-++.+.||++||+.||-
T Consensus 30 l~~~g~lDSl~~velv~~lE~~fgi~i~~ 58 (80)
T 1dv5_A 30 LFETGLLDSMGTVQLLLELQSQFGVDAPV 58 (80)
T ss_dssp SSTTSSCCSHHHHHHHHHHTTTSCCCCCC
T ss_pred hhhccCcChHHHHHHHHHHHHHhCCcCCH
Confidence 33333377888889999999999999973
No 116
>2zyc_A Peptidoglycan hydrolase FLGJ; 1.74A {Sphingomonas SP} PDB: 3k3t_A
Probab=54.61 E-value=7.2 Score=35.46 Aligned_cols=41 Identities=17% Similarity=0.177 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCccc
Q 009666 431 IAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTL 472 (529)
Q Consensus 431 IADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~I 472 (529)
|.++||+.+...|.+++|.-+-.. .+-=.|-+||-.||-..
T Consensus 1 ~~~~FI~~~~~~A~~~~~~~gI~~-sv~lAQA~LESgwG~S~ 41 (170)
T 2zyc_A 1 MAQAFVDATWPQAAKAAQSLGVPA-HFLVAQAALETGWGKSQ 41 (170)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTSCH-HHHHHHHHHHHTTTTTC
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCH-HHHHHHHHHHcCCCCCc
Confidence 468999999999999999888764 45445788999998553
No 117
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=54.58 E-value=28 Score=31.45 Aligned_cols=67 Identities=18% Similarity=0.376 Sum_probs=48.7
Q ss_pred ccCCHHHHHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCccc--CC
Q 009666 400 RILTKRSIQELVNQIDPS---ERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTL--PG 474 (529)
Q Consensus 400 rILtKrKLqELVrqIDPs---esLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~I--PG 474 (529)
.|-+|+-|++|++-|.+. ...+.+|.+-+|+|.++|-+..- . + -.++|+--.|++. |+.+ |.
T Consensus 88 evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~f~-------~----~-~~i~~~y~~Lk~~-G~~f~~P~ 154 (171)
T 1juq_A 88 EVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMALP-------E----E-AKIKDAYHMLKRQ-GIVQSDPP 154 (171)
T ss_dssp HHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHHHHHCT-------T----C-HHHHHHHHHHHHT-TSCSSCCC
T ss_pred HHhhHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHHHHHcC-------C----C-cHHHHHHHHHHHC-CCCCCCCC
Confidence 355788899999998764 36789999999999998877631 1 1 2488887777776 7766 77
Q ss_pred CCccc
Q 009666 475 FSGDE 479 (529)
Q Consensus 475 FssDE 479 (529)
+..|+
T Consensus 155 ~~~~~ 159 (171)
T 1juq_A 155 IPVDR 159 (171)
T ss_dssp BCCCT
T ss_pred CCccc
Confidence 66443
No 118
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=54.57 E-value=9.7 Score=34.89 Aligned_cols=64 Identities=11% Similarity=0.053 Sum_probs=41.8
Q ss_pred CCHHHHHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHH---HHHHhhhhcCCC-CcchhhHHHHHh
Q 009666 402 LTKRSIQELVNQI--DPSERLDPDVEDILVDIAEDFVESITM---FGCSLAKHRKSD-TLEAKDILVHLE 465 (529)
Q Consensus 402 LtKrKLqELVrqI--DPsesLDpDVEELLLeIADDFVDsVvs---~ACrLAKHRKSd-TLEvKDVQLhLE 465 (529)
++...+.+.++++ ..+..+|+++.+.|.++++--+..++. .++.++..++.+ .|+.+||.-.++
T Consensus 192 ~~~~~~~~~l~~~~~~~~~~i~~~~l~~l~~~~~G~~r~~~~~l~~~~~~~~~~~~~~~It~~~v~~~~~ 261 (353)
T 1sxj_D 192 LDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAG 261 (353)
T ss_dssp CCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHTSSCHHHHHHHHHHTHHHHHHHCSCCCCCHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCccCccccHHHHHHHhC
Confidence 4566666666664 245679999999999998755555444 444444433333 688888876655
No 119
>3fay_A P195, RAS GTPase-activating-like protein iqgap1; all alpha, calmodulin-binding, cell membrane, membrane, phosphoprotein, membrane protein; 2.20A {Homo sapiens}
Probab=54.26 E-value=23 Score=35.39 Aligned_cols=26 Identities=8% Similarity=0.120 Sum_probs=22.1
Q ss_pred CchHHHHHHHHHHHHHhhhhhheeee
Q 009666 488 VCDIHKERLAAVSFTLDIMCLLVIYK 513 (529)
Q Consensus 488 ptEaHKQRMALIRKtiK~m~~~~~~~ 513 (529)
.++..+.-+.+|-|.|..++..+.|.
T Consensus 259 ~~~~~rr~L~liaKvLQ~lan~~~f~ 284 (387)
T 3fay_A 259 LTTDQRRNLGSIAKMLQHAASNKMFL 284 (387)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CCHHHHhHHHHHHHHHHHHHcCCCCC
Confidence 46778889999999999999988763
No 120
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=54.10 E-value=67 Score=24.83 Aligned_cols=22 Identities=14% Similarity=0.371 Sum_probs=16.0
Q ss_pred CCcCCccCCHHHHHHHHHhhCC
Q 009666 395 DEFGNRILTKRSIQELVNQIDP 416 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDP 416 (529)
+.+++..|++..|..+++.++.
T Consensus 18 D~~~~G~i~~~el~~~l~~~~~ 39 (149)
T 2mys_C 18 DRTGDAKITASQVGDIARALGQ 39 (149)
T ss_pred CCCCCCcCcHHHHHHHHHHhCC
Confidence 4556677888888888887743
No 121
>2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis}
Probab=54.02 E-value=1.1 Score=38.17 Aligned_cols=50 Identities=12% Similarity=0.142 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCC
Q 009666 423 DVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 423 DVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
++++.|.+|..+.++ +.....|-.--+-|.|++-+|.+.||++||+.|+-
T Consensus 30 ei~~~v~~il~e~l~--I~~d~~l~~dLGlDSLd~veLi~~LEe~FgI~I~~ 79 (113)
T 2cgq_A 30 AINATIQRILRTDRG--ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISF 79 (113)
T ss_dssp HHHHHHHHHHTCCSC--CCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCH
T ss_pred HHHHHHHHHHHHHhC--CCCCCchhhhcCCCHHHHHHHHHHHHHHhCCCcCH
Confidence 344444444333333 33333444456788899999999999999999873
No 122
>1wer_A P120GAP; GTPase activation, RAS, signal transduction, growth regulation, cancer; 1.60A {Homo sapiens} SCOP: a.116.1.2 PDB: 1wq1_G*
Probab=53.99 E-value=41 Score=32.72 Aligned_cols=27 Identities=19% Similarity=0.156 Sum_probs=22.3
Q ss_pred CCCchHHHHHHHHHHHHHhhhhhheee
Q 009666 486 PLVCDIHKERLAAVSFTLDIMCLLVIY 512 (529)
Q Consensus 486 ~~ptEaHKQRMALIRKtiK~m~~~~~~ 512 (529)
..+++.-+.-+.+|-|.|..++..+.|
T Consensus 207 ~~p~~~~rr~L~lIaKvLQ~lan~~~f 233 (334)
T 1wer_A 207 DSPSPIAARTLILVAKSVQNLANLVEF 233 (334)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHccccC
Confidence 345777788899999999999988766
No 123
>3fi7_A LMO1076 protein; listeria monocytogenes, autolysin, N acetylglucosaminidase, peptidoglycan hydrolase, autoinhibition, GH73, hydrolase; 2.35A {Undefined}
Probab=52.86 E-value=13 Score=34.44 Aligned_cols=52 Identities=21% Similarity=0.358 Sum_probs=38.5
Q ss_pred CCCHHHHHHHHHH------HHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcc
Q 009666 419 RLDPDVEDILVDI------AEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMT 471 (529)
Q Consensus 419 sLDpDVEELLLeI------ADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~ 471 (529)
.|+.-|.+.+..+ .++||+.+...|.+++|..+... .+.=.|-+||-.||..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~FI~~i~~~A~~~~~~~gi~~-s~~laQa~lESgwG~s 68 (183)
T 3fi7_A 11 SLEQNRDDAMAALASTPTFQQTFINSISTQAMDLCKKYNLYP-SVMIAQAALESNWGRS 68 (183)
T ss_dssp CHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHHHHTTCCH-HHHHHHHHHHHTTTTS
T ss_pred HHHHhhhhhcccccCCCccHHHHHHHHHHHHHHHHHHhCCCH-HHHHHHHHHHccCCCC
Confidence 4444444444444 67999999999999999888763 4555688999999864
No 124
>1rr7_A Middle operon regulator; MOR, transcription; 2.20A {Enterobacteria phage MU} SCOP: a.4.1.14
Probab=52.11 E-value=15 Score=31.92 Aligned_cols=55 Identities=13% Similarity=0.320 Sum_probs=25.2
Q ss_pred HHHHHhhCCCCCCCHHHH----HHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccC---cccCC
Q 009666 408 QELVNQIDPSERLDPDVE----DILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWN---MTLPG 474 (529)
Q Consensus 408 qELVrqIDPsesLDpDVE----ELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWN---I~IPG 474 (529)
.+|+..+|- |+|++ |+|.+|||-+.. .|.+| |-+..++-++...|-+.|+ +.||-
T Consensus 12 ~~~~~~l~~----~~~~~~~~Pe~L~el~~~ig~-------~L~~~-Gi~~~~~ie~~~~L~~~~gG~~iYIPk 73 (129)
T 1rr7_A 12 DTILAHLDN----PAEDTSRFPALLAELNDLLRG-------ELSRL-GVDPAHSLEIVVAICKHLGGGQVYIPR 73 (129)
T ss_dssp -------------------CHHHHHHHHHHHHHH-------HHHHT-SSCTTSHHHHHHHHHHHHCSSCCCCCC
T ss_pred hHHHHHhcC----hHHHHHHhHHHHHHHHHHHHH-------HHHHc-CCCHHHHHHHHHHHHHHHCCeeEEeeC
Confidence 456666665 66666 888888875554 33444 4443444477777888876 44554
No 125
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=51.60 E-value=12 Score=36.09 Aligned_cols=51 Identities=6% Similarity=-0.039 Sum_probs=35.0
Q ss_pred CCHHHHHHHHHhhCCC--CCCCHHHHHHHHHHHHHH----HHHHHHHHHHhhhhcCC
Q 009666 402 LTKRSIQELVNQIDPS--ERLDPDVEDILVDIAEDF----VESITMFGCSLAKHRKS 452 (529)
Q Consensus 402 LtKrKLqELVrqIDPs--esLDpDVEELLLeIADDF----VDsVvs~ACrLAKHRKS 452 (529)
.+.+...++++.+-.. ..++++..+.|.+.++-| |+.++..|+.+|-.|..
T Consensus 217 P~~~~r~~il~~~l~~~~~~~~~~~l~~la~~t~G~sg~dl~~l~~~A~~~a~~~~~ 273 (355)
T 2qp9_X 217 PDLAARTTMFEINVGDTPSVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQ 273 (355)
T ss_dssp CCHHHHHHHHHHHHTTSCBCCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3555556666654322 247888888888888775 77888888888877643
No 126
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=51.57 E-value=22 Score=27.10 Aligned_cols=64 Identities=11% Similarity=0.240 Sum_probs=40.6
Q ss_pred ccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH--HHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 400 RILTKRSIQELVNQIDPSERLDPDVEDILVDIA--EDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 400 rILtKrKLqELVrqIDPsesLDpDVEELLLeIA--DDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
..+++..|.+|++.+|.+..|+-+ |++.-+. .+ -..-+..++++.-..+...|+.+++.-.|..
T Consensus 5 ~~~~~~ei~~~~~~~D~~g~i~~~--eF~~~~~~~~~-~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~ 70 (109)
T 3fs7_A 5 DILSAKDIESALSSCQAADSFNYK--SFFSTVGLSSK-TPDQIKKVFGILDQDKSGFIEEEELQLFLKN 70 (109)
T ss_dssp GTSCHHHHHHHHHHTCSTTCCCHH--HHHHHHTCTTC-CHHHHHHHHHHHSTTCSSSBCHHHHHTTGGG
T ss_pred CcCCHHHHHHHHHhcCCCCcCcHH--HHHHHHhcCCC-cHHHHHHHHHHHCCCCCCeEeHHHHHHHHHH
Confidence 457899999999999977777753 2222221 11 1223445555555566677888888766654
No 127
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=51.47 E-value=28 Score=30.37 Aligned_cols=63 Identities=17% Similarity=0.263 Sum_probs=40.4
Q ss_pred CCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH-------HHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 398 GNRILTKRSIQELVNQIDPSERLDPDVEDILVDI-------AEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 398 ~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI-------ADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+.-.++-..|.+-+..+ +...|++|.|=++|| +++||+.-+.|++. ++ ...+.+..+ --+||+
T Consensus 22 ~~~~Vsae~L~eEfdef--Gi~~~d~VldKc~ELC~~y~lda~e~VeeWmAFsts--~~--g~~pT~enL-~~FEhE 91 (101)
T 2keb_A 22 GSMSASAQQLAEELQIF--GLDCEEALIEKLVELCVQYGQNEEGMVGELIAFCTS--TH--KVGLTSEIL-NSFEHE 91 (101)
T ss_dssp --CCCCHHHHHHHHHHH--TCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH--HT--CSBCCHHHH-HHHHHH
T ss_pred chhhccHHHHHHHHHHc--CCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh--cC--CCCCCHHHH-HHHHHH
Confidence 33445555555555544 456788999999888 79999999999663 44 333555444 455554
No 128
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=51.47 E-value=84 Score=24.91 Aligned_cols=71 Identities=8% Similarity=0.282 Sum_probs=35.6
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH---------HHHHHHHH------------HHHHHHhhhhcCCC
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI---------AEDFVESI------------TMFGCSLAKHRKSD 453 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI---------ADDFVDsV------------vs~ACrLAKHRKSd 453 (529)
+.++...|++..|..+++.++... -+.++++++..+ -++|+.-+ +..++++.-..+..
T Consensus 20 D~d~~G~i~~~el~~~l~~~g~~~-~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G 98 (148)
T 1exr_A 20 DKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNG 98 (148)
T ss_dssp CTTCSSEECHHHHHHHHHHHTCCC-CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCSS
T ss_pred CCCCCCcCcHHHHHHHHHHcCCCC-CHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHHHHHHhCCCCCC
Confidence 344555667777766666653221 122233333222 12444322 33455555455666
Q ss_pred CcchhhHHHHHhh
Q 009666 454 TLEAKDILVHLER 466 (529)
Q Consensus 454 TLEvKDVQLhLER 466 (529)
.|+..++.-.|..
T Consensus 99 ~I~~~el~~~l~~ 111 (148)
T 1exr_A 99 LISAAELRHVMTN 111 (148)
T ss_dssp CBCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHH
Confidence 6777777666654
No 129
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=51.16 E-value=33 Score=34.89 Aligned_cols=27 Identities=4% Similarity=0.061 Sum_probs=21.9
Q ss_pred CCCchHHHHHHHHHHHHHhhhhhheee
Q 009666 486 PLVCDIHKERLAAVSFTLDIMCLLVIY 512 (529)
Q Consensus 486 ~~ptEaHKQRMALIRKtiK~m~~~~~~ 512 (529)
..+++.-+.-+.+|-|.|..++..+.|
T Consensus 362 ~~p~~~~~r~L~liaKvLQ~lan~~~f 388 (483)
T 3bxj_A 362 EYPDEQTSRTLTLIAKVIQNLANFSKF 388 (483)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 356677788899999999999988766
No 130
>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A*
Probab=50.95 E-value=3.9 Score=31.22 Aligned_cols=27 Identities=26% Similarity=0.545 Sum_probs=22.9
Q ss_pred hhcCCCCcchhhHHHHHhhccCcccCC
Q 009666 448 KHRKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 448 KHRKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
..-|-|.|++-++...||+.||+.||-
T Consensus 33 ~dlg~DSl~~vel~~~le~~fgi~i~~ 59 (81)
T 3gzm_A 33 KDLGADSLDLVELIMALEEKFNVTISD 59 (81)
T ss_dssp HHSCCCHHHHHHHHHHHHHHHTCCCCH
T ss_pred hhcCCCHHHHHHHHHHHHHHHCCCcCH
Confidence 455778888999999999999999864
No 131
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=50.83 E-value=24 Score=26.86 Aligned_cols=66 Identities=12% Similarity=0.132 Sum_probs=40.9
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
.+++..|++|++.+|.+..|+-+---.++.+.++- ..-+..+.++.-..+...|+.+++...|.+.
T Consensus 5 ~~t~~e~~~~~~~~d~~g~i~~~eF~~~~~~~~~~-~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 70 (108)
T 1rro_A 5 ILSAEDIAAALQECQDPDTFEPQKFFQTSGLSKMS-ASQVKDIFRFIDNDQSGYLDGDELKYFLQKF 70 (108)
T ss_dssp TSCHHHHHHHHHHTCSTTCCCHHHHHHHHSGGGSC-HHHHHHHHHHHCTTCSSEECTHHHHTGGGGT
T ss_pred cCCHHHHHHHHHHccCCCCcCHHHHHHHHhcCccc-HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 47899999999999977777754222222211111 2234455555555666678888887777653
No 132
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=50.69 E-value=42 Score=27.89 Aligned_cols=70 Identities=13% Similarity=0.152 Sum_probs=42.1
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH----------HHHHHHH-----------HHHHHHhhhhcCCC
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIA----------EDFVESI-----------TMFGCSLAKHRKSD 453 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIA----------DDFVDsV-----------vs~ACrLAKHRKSd 453 (529)
+.+++..|++..|.++++.++. .++++..+.|.+.. +||+.-+ +..+.+..-..+..
T Consensus 47 D~d~~G~i~~~e~~~~l~~~~~--~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G 124 (204)
T 3e3r_A 47 DRDGSRSLDADEFRQGLAKLGL--VLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDG 124 (204)
T ss_dssp CTTCCSSBCHHHHHHHHHTTTC--CCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHHHHHCTTCSS
T ss_pred ccCCCCCcCHHHHHHHHHHcCC--CCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHHHHhCcCCCC
Confidence 4567778888888888887743 34444333333333 3666433 44555555555666
Q ss_pred CcchhhHHHHHhh
Q 009666 454 TLEAKDILVHLER 466 (529)
Q Consensus 454 TLEvKDVQLhLER 466 (529)
.|+..++.-.|+.
T Consensus 125 ~I~~~El~~~l~~ 137 (204)
T 3e3r_A 125 VVTVDDLRGVYSG 137 (204)
T ss_dssp EECHHHHHHHCCC
T ss_pred eEeHHHHHHHHcc
Confidence 6777777666653
No 133
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=50.64 E-value=49 Score=28.16 Aligned_cols=68 Identities=9% Similarity=0.110 Sum_probs=37.1
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHH-HHHHHHHH-----HHHHHHHH------------HHHHHHhhhhcCCCCcc
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPD-VEDILVDI-----AEDFVESI------------TMFGCSLAKHRKSDTLE 456 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpD-VEELLLeI-----ADDFVDsV------------vs~ACrLAKHRKSdTLE 456 (529)
+.+++..|++..|..+++.++ ..++.+ +.+++..+ .++|+.-+ +..++++.-..+...|+
T Consensus 67 D~d~~G~i~~~el~~~l~~lg--~~~~~~~~~~l~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is 144 (196)
T 3dtp_E 67 DQDKDGFISKNDIRATFDSLG--RLCTEQELDSMVAEAPGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGDGKCKE 144 (196)
T ss_dssp CCSCSSBCCHHHHHHHHHTTS--CCCCHHHHHHHHTTSSSCCBHHHHHHHHHHCCCSSCCHHHHHHHHHTTCSSSSCCBH
T ss_pred CCCCCCcCCHHHHHHHHHHhC--CCCCHHHHHHHHHHccCCCcHHHHHHHHHHHhcCCCcHHHHHHHHHHHCCCCCCcCc
Confidence 345666788888888888764 233333 33333221 23454433 33444444445556677
Q ss_pred hhhHHHHH
Q 009666 457 AKDILVHL 464 (529)
Q Consensus 457 vKDVQLhL 464 (529)
..++.-+|
T Consensus 145 ~~El~~~l 152 (196)
T 3dtp_E 145 ETLKRSLT 152 (196)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776666
No 134
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=50.35 E-value=29 Score=24.88 Aligned_cols=21 Identities=10% Similarity=0.298 Sum_probs=13.8
Q ss_pred CCcCCccCCHHHHHHHHHhhC
Q 009666 395 DEFGNRILTKRSIQELVNQID 415 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqID 415 (529)
+.+++..|++..|..+++.+.
T Consensus 13 D~~~~G~i~~~el~~~l~~~g 33 (78)
T 1k9u_A 13 DTNGDGKISLSELTDALRTLG 33 (78)
T ss_dssp CTTCSSEECHHHHHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHhC
Confidence 344555677777777777764
No 135
>4e2i_2 DNA polymerase alpha subunit B; replication initiation, hydrolase-DNA binding complex, hydro binding protein complex; HET: DNA; 5.00A {Homo sapiens}
Probab=50.00 E-value=17 Score=30.26 Aligned_cols=40 Identities=20% Similarity=0.312 Sum_probs=32.3
Q ss_pred HHHHHHhhCC-CCCCCHHHHHHHHHHH-------HHHHHHHHHHHHHh
Q 009666 407 IQELVNQIDP-SERLDPDVEDILVDIA-------EDFVESITMFGCSL 446 (529)
Q Consensus 407 LqELVrqIDP-sesLDpDVEELLLeIA-------DDFVDsVvs~ACrL 446 (529)
+++|..++|- +...+++|.|-|++|+ ||||++.+.|++..
T Consensus 5 ~e~l~~el~~Fgi~c~d~v~eKl~ElC~~y~~~~~e~V~ew~Afs~s~ 52 (78)
T 4e2i_2 5 AQQLAEELQIFGLDCEEALIEKLVELCVQYGQNEEGMVGELIAFCTST 52 (78)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHTHHHHSCCCHHHHHHHHTTHHHHT
T ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhc
Confidence 5666666664 5677889999999885 99999999999984
No 136
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=49.48 E-value=16 Score=37.41 Aligned_cols=50 Identities=14% Similarity=0.124 Sum_probs=37.1
Q ss_pred CCCHHH-HHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhcc
Q 009666 419 RLDPDV-EDILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (529)
Q Consensus 419 sLDpDV-EELLLeIADDF----VDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (529)
.+++|+ .+.|.+.++.| |..||..|+..|-.|+...|+.+|+.-.|++..
T Consensus 361 ~l~~~~dl~~lA~~t~G~sgadi~~l~~eA~~~a~r~~~~~i~~~d~~~A~~~~~ 415 (428)
T 4b4t_K 361 SLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEAYATQV 415 (428)
T ss_dssp CBCTTCCHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHHS
T ss_pred CCCcccCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHhh
Confidence 344443 34455555544 788999999999999999999999998888753
No 137
>3us6_A Histidine-containing phosphotransfer protein type MTHPT1; helix bundle, plant hormone signal transduction, cytokinin S transduction; 1.45A {Medicago truncatula}
Probab=49.43 E-value=28 Score=30.70 Aligned_cols=49 Identities=10% Similarity=0.115 Sum_probs=32.8
Q ss_pred HHHHHHHHHhhCCCCCCCHH-----------HHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Q 009666 404 KRSIQELVNQIDPSERLDPD-----------VEDILVDIAEDFVESITMFGCSLAKHRKS 452 (529)
Q Consensus 404 KrKLqELVrqIDPsesLDpD-----------VEELLLeIADDFVDsVvs~ACrLAKHRKS 452 (529)
.++|.+|++.+.....||+. -.|++.+|.+.|+++.-..-..|.+.-..
T Consensus 7 ~~~~~~~~~~l~~~g~LD~~f~qL~~L~~~~~~~~~~ell~~Fl~d~~~~l~~L~~al~~ 66 (153)
T 3us6_A 7 RRQWVDYIKSMFMEGFLDGQFLQLQQLQDENNPEFVFEVVSLFFDDSERILKDLSFAVDQ 66 (153)
T ss_dssp HHHHHHHHHHHHHTTSCCHHHHHHHHTCBTTBTTHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhcccccchHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 35666777776655666642 24678889999999987766666655443
No 138
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=49.01 E-value=57 Score=34.44 Aligned_cols=49 Identities=8% Similarity=0.137 Sum_probs=36.6
Q ss_pred CCHHHHHHHHHhhCC------CCCCCHHHHHHHHHHHHHHH---------HHHHHHHHHhhhhc
Q 009666 402 LTKRSIQELVNQIDP------SERLDPDVEDILVDIAEDFV---------ESITMFGCSLAKHR 450 (529)
Q Consensus 402 LtKrKLqELVrqIDP------sesLDpDVEELLLeIADDFV---------DsVvs~ACrLAKHR 450 (529)
.+...+.++++.+-. +..+++++.+.+.++++.|+ -+++..||..++.+
T Consensus 325 p~~~~~~~il~~~~~~~~~~~~~~i~~~al~~~~~~s~~~i~~~~~p~~ai~ll~~a~~~~~~~ 388 (758)
T 3pxi_A 325 PSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLR 388 (758)
T ss_dssp CCHHHHHHHHHHTTTTSGGGSSCSCCHHHHHHHHHHHHHSSCCSCTTHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcccccCcCCcHHHHHHHHHHHHHHhh
Confidence 467788888886643 45799999999999998774 35677777766554
No 139
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=48.72 E-value=69 Score=25.20 Aligned_cols=70 Identities=13% Similarity=0.098 Sum_probs=38.9
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH----------HHHHHHHH------------HHHHHhhhhcCC
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIA----------EDFVESIT------------MFGCSLAKHRKS 452 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIA----------DDFVDsVv------------s~ACrLAKHRKS 452 (529)
+.+++..|++..|..+++.++ ..++++..+.|.+.+ +||+.-+. ..++++.-..+.
T Consensus 33 D~~~~G~i~~~e~~~~l~~~~--~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~ 110 (161)
T 3fwb_A 33 DMNNDGFLDYHELKVAMKALG--FELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHT 110 (161)
T ss_dssp CTTSSSEECHHHHHHHHHHTT--CCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHHHHHCTTCS
T ss_pred CCCCCCcCcHHHHHHHHHHcC--CCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHHHHHcCCCC
Confidence 445667788888888888763 234444333333332 45554443 333444434455
Q ss_pred CCcchhhHHHHHhh
Q 009666 453 DTLEAKDILVHLER 466 (529)
Q Consensus 453 dTLEvKDVQLhLER 466 (529)
..|+..++.-+|+.
T Consensus 111 G~i~~~el~~~l~~ 124 (161)
T 3fwb_A 111 GKISIKNLRRVAKE 124 (161)
T ss_dssp SEECHHHHHHHHHH
T ss_pred CeEeHHHHHHHHHH
Confidence 56777777666654
No 140
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=48.68 E-value=7.5 Score=37.73 Aligned_cols=109 Identities=9% Similarity=0.099 Sum_probs=67.7
Q ss_pred cCCccCCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHH----HHhhhhc--CCCCcchhhHHHHHhhccC
Q 009666 397 FGNRILTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMFG----CSLAKHR--KSDTLEAKDILVHLERNWN 469 (529)
Q Consensus 397 ~~nrILtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvs~A----CrLAKHR--KSdTLEvKDVQLhLERnWN 469 (529)
+----|+-+....+++.|. .-.++|++-.+...+=+++|+..+-... -++++.+ +...|...|.--||.|.||
T Consensus 136 DPHvWldp~n~~~~a~~I~~~L~~~DP~~a~~Y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yfa~~yG 215 (313)
T 1toa_A 136 DPHVWFDVKLWSYSVKAVYESLCKLLPGKTREFTQRYQAYQQQLDKLDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYG 215 (313)
T ss_dssp CCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCEEEEEESCCHHHHHHHT
T ss_pred CCceeCCHHHHHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccCCEEEEECCcHHHHHHHCC
Confidence 3334567777777777773 3346788877888888888877665433 3455433 5567888999999999999
Q ss_pred cccCCCCcccccccCCCCCchHHHHHHHHHHHHHhhhhhheee
Q 009666 470 MTLPGFSGDEIKTFRKPLVCDIHKERLAAVSFTLDIMCLLVIY 512 (529)
Q Consensus 470 I~IPGFssDEIR~~RK~~ptEaHKQRMALIRKtiK~m~~~~~~ 512 (529)
+.+-|+- ++.+- .|-=-++|+.|.+.||+--.-+||
T Consensus 216 l~~~~~~--~~~~~-----~eps~~~l~~l~~~ik~~~v~~If 251 (313)
T 1toa_A 216 FEVKGLQ--GVSTA-----SEASAHDMQELAAFIAQRKLPAIF 251 (313)
T ss_dssp CEEEEEE--CSSCS-----SCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CeEEEee--ccCCC-----CCCCHHHHHHHHHHHHHcCCCEEE
Confidence 9864432 11111 111234566666666665444444
No 141
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=48.66 E-value=11 Score=31.35 Aligned_cols=14 Identities=7% Similarity=0.608 Sum_probs=6.9
Q ss_pred hhHHHHHhhccCcc
Q 009666 458 KDILVHLERNWNMT 471 (529)
Q Consensus 458 KDVQLhLERnWNI~ 471 (529)
.++...|++.|++.
T Consensus 190 ~~f~~~~~~~w~~~ 203 (204)
T 3e3r_A 190 EEFVAMMTSAWQLK 203 (204)
T ss_dssp HHHHHHHHHHHTC-
T ss_pred HHHHHHHHHhCCCC
Confidence 34555555555554
No 142
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=48.49 E-value=19 Score=27.51 Aligned_cols=66 Identities=9% Similarity=0.105 Sum_probs=43.1
Q ss_pred ccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 400 RILTKRSIQELVNQIDPSERLDPDVEDILVDIAE-DFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 400 rILtKrKLqELVrqIDPsesLDpDVEELLLeIAD-DFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
.++++..|.+|++.+|.+..|+-+ |++.-+.. .--..-+..++++.-..+...|+.+++...|...
T Consensus 4 ~~~s~~ei~~~~~~~d~~g~i~~~--eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~ 70 (109)
T 5pal_A 4 KVLKADDINKAISAFKDPGTFDYK--RFFHLVGLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGF 70 (109)
T ss_dssp GTSCHHHHHHHHHHTCSTTCCCHH--HHHHHHTCTTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHH
T ss_pred CcCCHHHHHHHHHHhCCCCcCcHH--HHHHHHhhccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 468999999999999987777743 33322210 0012334556666666677788888888777764
No 143
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=48.42 E-value=18 Score=35.16 Aligned_cols=107 Identities=15% Similarity=0.145 Sum_probs=65.4
Q ss_pred CccCCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh----hhh--cCCCCcchhhHHHHHhhccCcc
Q 009666 399 NRILTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMFGCSL----AKH--RKSDTLEAKDILVHLERNWNMT 471 (529)
Q Consensus 399 nrILtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvs~ACrL----AKH--RKSdTLEvKDVQLhLERnWNI~ 471 (529)
---|+-+....+++.|. .-.++|++-.+...+=+++|+..+-...-++ ++. ++...|...|.--||.|.||+.
T Consensus 131 HvWldp~n~~~~a~~I~~~L~~~DP~~a~~Y~~Na~~~~~~L~~Ld~~~~~~l~~~p~~~~~~v~~H~af~Yfa~~yGl~ 210 (307)
T 3ujp_A 131 HAWMSPRNALVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGME 210 (307)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCGGGCEEEEEESTTHHHHHHTTCE
T ss_pred CcCCCHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCEEEEECchHHHHHHHCCCc
Confidence 34567777777777773 3346788877777778888887775554433 432 3344556789999999999998
Q ss_pred cCCCCcccccccCCCCCchHHHHHHHHHHHHHhhhhhheee
Q 009666 472 LPGFSGDEIKTFRKPLVCDIHKERLAAVSFTLDIMCLLVIY 512 (529)
Q Consensus 472 IPGFssDEIR~~RK~~ptEaHKQRMALIRKtiK~m~~~~~~ 512 (529)
+=|+-+ +.+- ..++ -++|+.|.+.||+--.-+||
T Consensus 211 ~~~~~~--i~~~--~ePs---~~~l~~l~~~ik~~~v~~If 244 (307)
T 3ujp_A 211 EIYMWP--INAE--QQFT---PKQVQTVIEEVKTNNVPTIF 244 (307)
T ss_dssp EEEEES--SCCS--SCCC---HHHHHHHHHHHHTTTCSEEE
T ss_pred EEEeec--cCCC--CCCC---HHHHHHHHHHHHhcCCcEEE
Confidence 642211 1110 1122 35566666666665554444
No 144
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=48.36 E-value=35 Score=27.32 Aligned_cols=20 Identities=20% Similarity=0.428 Sum_probs=10.9
Q ss_pred CCcCCccCCHHHHHHHHHhh
Q 009666 395 DEFGNRILTKRSIQELVNQI 414 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqI 414 (529)
+.+++..|++..|.++++.+
T Consensus 46 D~d~~G~I~~~El~~~l~~l 65 (100)
T 2lv7_A 46 DRDGNGFISKQELGTAMRSL 65 (100)
T ss_dssp CSSCSSCBCHHHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHh
Confidence 33455555555555555555
No 145
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=48.32 E-value=29 Score=26.43 Aligned_cols=65 Identities=9% Similarity=0.158 Sum_probs=43.0
Q ss_pred ccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH--HHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 400 RILTKRSIQELVNQIDPSERLDPDVEDILVDI--AEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 400 rILtKrKLqELVrqIDPsesLDpDVEELLLeI--ADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
..+++..|.+|++.+|.+..|+-+ |++.-+ ..+- ..-+..+.++.-..+...|+.+|+.-.|.+.
T Consensus 5 ~~~~~~e~~~~~~~~d~~g~i~~~--eF~~~~~~~~~~-~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 71 (109)
T 1bu3_A 5 GILADADVAAALKACEAADSFNYK--AFFAKVGLTAKS-ADDIKKAFFVIDQDKSGFIEEDELKLFLQVF 71 (109)
T ss_dssp CSSCHHHHHHHHHHTCSTTCCCHH--HHHHHHTGGGSC-HHHHHHHHHHHCTTCSSSEEHHHHHTHHHHH
T ss_pred ccCCHHHHHHHHHHhCCCCcCcHH--HHHHHHHcChhh-HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 457899999999999977777744 222211 1111 2334556666666677788999998777764
No 146
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=48.18 E-value=42 Score=32.26 Aligned_cols=65 Identities=8% Similarity=0.080 Sum_probs=40.2
Q ss_pred CCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHH----HHHHHHHHhhhhc------------CCCCcchhhHHHH
Q 009666 402 LTKRSIQELVNQID--PSERLDPDVEDILVDIAEDFVE----SITMFGCSLAKHR------------KSDTLEAKDILVH 463 (529)
Q Consensus 402 LtKrKLqELVrqID--PsesLDpDVEELLLeIADDFVD----sVvs~ACrLAKHR------------KSdTLEvKDVQLh 463 (529)
.+.+...++++.+- -...|++++.+.|.++++.|.. .++..|+..|..+ +...|+.+|+...
T Consensus 282 p~~~~r~~il~~~~~~~~~~l~~~~~~~la~~~~g~~~~~l~~L~~~a~~~~~rel~~~~~~~~~~~~~~~i~~~d~~~a 361 (389)
T 3vfd_A 282 PNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTES 361 (389)
T ss_dssp CCHHHHHHHHHHHHTTSCCCSCHHHHHHHHHHTTTCCHHHHHHHHHHHTTHHHHTSCCC---CCSSSCCCCCCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhhhhhhhccchhhcCCcCHHHHHHH
Confidence 45666666666552 2356888888888888776544 4445555444444 2345667777666
Q ss_pred Hhh
Q 009666 464 LER 466 (529)
Q Consensus 464 LER 466 (529)
|++
T Consensus 362 l~~ 364 (389)
T 3vfd_A 362 LKK 364 (389)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 147
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=48.00 E-value=10 Score=39.39 Aligned_cols=60 Identities=20% Similarity=0.251 Sum_probs=40.9
Q ss_pred HHHHHhhCCCCCCCHHH-HHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 408 QELVNQIDPSERLDPDV-EDILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 408 qELVrqIDPsesLDpDV-EELLLeIADDF----VDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
.++++..-.+..+++|| .+.|.+.++.| |..||..|+.+|-.++...|+.+|+.-.|+|-
T Consensus 359 ~~Il~~~l~~~~l~~dvdl~~LA~~T~GfSGADI~~l~~eA~~~Air~~~~~It~eDf~~Al~rv 423 (437)
T 4b4t_I 359 KKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERV 423 (437)
T ss_dssp HHHHHHHHTTSCBCSCCCHHHHHHHCCSCCHHHHHHHHHHHHHHHHHTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCcCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHH
Confidence 34444333334454443 34455555443 78899999999998999999999999998874
No 148
>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii}
Probab=47.94 E-value=4.3 Score=30.92 Aligned_cols=26 Identities=15% Similarity=0.572 Sum_probs=22.0
Q ss_pred hcCCCCcchhhHHHHHhhccCcccCC
Q 009666 449 HRKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 449 HRKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
.-|-|.|++-++...||+.||+.||-
T Consensus 36 dlG~DSl~~vel~~~le~~fgi~i~~ 61 (82)
T 2qnw_A 36 DLDADSLDSVELVMAFEEKFGVSIPD 61 (82)
T ss_dssp HSCCCHHHHHHHHHHHHHHHTCCCCH
T ss_pred ccCCcHHHHHHHHHHHHHHHCCcCCH
Confidence 45778888889999999999999874
No 149
>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.69 E-value=2.2 Score=34.21 Aligned_cols=25 Identities=20% Similarity=0.520 Sum_probs=20.6
Q ss_pred cCCCCcchhhHHHHHhhccCcccCC
Q 009666 450 RKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
-+-|.|++-+|...||++||+.||-
T Consensus 45 lG~DSL~~vel~~~le~~fgi~i~~ 69 (99)
T 2dnw_A 45 LGLDSLDQVEIIMAMEDEFGFEIPD 69 (99)
T ss_dssp CCCCHHHHHHHHHHHHHHTTCCCCH
T ss_pred cCCCHHHHHHHHHHHHHHHCCCCCH
Confidence 4667788888999999999999863
No 150
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=47.58 E-value=70 Score=25.87 Aligned_cols=78 Identities=9% Similarity=-0.007 Sum_probs=40.2
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCCCCcccccc----c--CCCCCchHHHHHHHHHHHHHhhhhhheee
Q 009666 439 ITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGDEIKT----F--RKPLVCDIHKERLAAVSFTLDIMCLLVIY 512 (529)
Q Consensus 439 Vvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssDEIR~----~--RK~~ptEaHKQRMALIRKtiK~m~~~~~~ 512 (529)
.+..+.++.-..+...|+.+++.-.|.. +|.. ...++++. + .....-++...-|..++...+.+..+-.-
T Consensus 71 ~~~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~---~~~~~~~~~~~~~d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d 146 (165)
T 1k94_A 71 AWKENFMTVDQDGSGTVEHHELRQAIGL-MGYR---LSPQTLTTIVKRYSKNGRIFFDDYVACCVKLRALTDFFRKRDHL 146 (165)
T ss_dssp HHHHHHHHHCTTCCSBCCHHHHHHHHHH-TTCC---CCHHHHHHHHHHHCBTTBCBHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHhCCCCCceECHHHHHHHHHH-hCCC---CCHHHHHHHHHHhCCCCeEcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3455666666667788999999888875 3433 22223221 1 11122234444444444444444444444
Q ss_pred ecceeeEe
Q 009666 513 KDACLSVH 520 (529)
Q Consensus 513 ~~~~~~~~ 520 (529)
+|.++++.
T Consensus 147 ~~G~i~~~ 154 (165)
T 1k94_A 147 QQGSANFI 154 (165)
T ss_dssp CCSEEEEE
T ss_pred CCCeEeee
Confidence 45555544
No 151
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=47.10 E-value=42 Score=29.58 Aligned_cols=65 Identities=14% Similarity=0.217 Sum_probs=46.7
Q ss_pred cCCHHHHHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCCCCc
Q 009666 401 ILTKRSIQELVNQIDPS---ERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSG 477 (529)
Q Consensus 401 ILtKrKLqELVrqIDPs---esLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFss 477 (529)
|-+|+-|.+|++-|.+. ...+.+|.+-+|+|..+|-+..- .+ -+++|+---|++. |+.+|.-.-
T Consensus 77 vas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~f~-----------~~-p~i~~~y~~Lk~~-G~~Fp~~~~ 143 (148)
T 1mhq_A 77 VAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFP-----------ED-IKIRDAYQMLKKQ-GIIKQDPKL 143 (148)
T ss_dssp HTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHHHHHCT-----------TC-HHHHHHHHHHHHT-TSSCSCCCC
T ss_pred HhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHHHHHcC-----------CC-chHHHHHHHHHHc-CCCCCCCCC
Confidence 45788889999888764 35788999999998888866521 11 2378887777776 888887654
Q ss_pred c
Q 009666 478 D 478 (529)
Q Consensus 478 D 478 (529)
+
T Consensus 144 ~ 144 (148)
T 1mhq_A 144 P 144 (148)
T ss_dssp -
T ss_pred C
Confidence 4
No 152
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=46.99 E-value=49 Score=27.95 Aligned_cols=122 Identities=9% Similarity=0.067 Sum_probs=66.9
Q ss_pred CCcCCccCCHHHHHHHHHhhCCC---CCCCHHHHHHHHHHH----------HHHHHHH-----HHHHHHhhhhcCCCCcc
Q 009666 395 DEFGNRILTKRSIQELVNQIDPS---ERLDPDVEDILVDIA----------EDFVESI-----TMFGCSLAKHRKSDTLE 456 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPs---esLDpDVEELLLeIA----------DDFVDsV-----vs~ACrLAKHRKSdTLE 456 (529)
+.+++..|++..|.++++.+... ..++++..+.|.+.+ +||+.-+ +..+.++.-..+...|+
T Consensus 42 D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~I~ 121 (198)
T 1juo_A 42 VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTVD 121 (198)
T ss_dssp HHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHTTCTTCCSEEC
T ss_pred hCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHHHHHHHhCCCCCCcCC
Confidence 45677789999999999988642 245554444444443 3566533 44455555556677899
Q ss_pred hhhHHHHHhhccCcccCCCCcccccc----c--CCCCCchHHHHHHHHHHHHHhhhhhheeeecceeeEe
Q 009666 457 AKDILVHLERNWNMTLPGFSGDEIKT----F--RKPLVCDIHKERLAAVSFTLDIMCLLVIYKDACLSVH 520 (529)
Q Consensus 457 vKDVQLhLERnWNI~IPGFssDEIR~----~--RK~~ptEaHKQRMALIRKtiK~m~~~~~~~~~~~~~~ 520 (529)
.+++.-.|++ +|.. +..++++. + .....-++...-|..++...+.+..+-.-+|..+++.
T Consensus 122 ~~el~~~l~~-~g~~---~~~~~~~~l~~~~d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~is~~ 187 (198)
T 1juo_A 122 PQELQKALTT-MGFR---LSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQQGVVNFP 187 (198)
T ss_dssp HHHHHHHHHH-TTCC---CCHHHHHHHHHHTCSSSSEEHHHHHHHHHHHHHHHHHHHHTCTTCCSEEEEE
T ss_pred HHHHHHHHHH-hCCC---CCHHHHHHHHHHhCCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEeec
Confidence 9999888875 3433 22233221 1 0111223454444444444444444444455555554
No 153
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=46.58 E-value=25 Score=26.69 Aligned_cols=66 Identities=12% Similarity=0.121 Sum_probs=42.8
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
.+++..|.+|++.+|.+..|+-+---.++.+..+- ...+..++++.-..+...|+.+|+.-.|...
T Consensus 5 ~~t~~e~~~~~~~~d~~g~i~~~eF~~~~~~~~~~-~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 70 (109)
T 1rwy_A 5 LLSAEDIKKAIGAFTAADSFDHKKFFQMVGLKKKS-ADDVKKVFHILDKDKSGFIEEDELGSILKGF 70 (109)
T ss_dssp HSCHHHHHHHHHTTCSTTCCCHHHHHHHHTGGGSC-HHHHHHHHHHHSTTCSSEECHHHHHTHHHHH
T ss_pred cCCHHHHHHHHHHcCCCCcEeHHHHHHHHhcCcch-HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHH
Confidence 37889999999999977777754221122111111 2344566666666677789999998888764
No 154
>1yvi_A Histidine-containing phosphotransfer protein; structural genomics, protein structure initiative, PSI, CESG, AK104879, phosphorelay mediator, HP1; 2.00A {Oryza sativa} SCOP: a.24.10.2 PDB: 2q4f_A 1wn0_A
Probab=46.35 E-value=30 Score=29.93 Aligned_cols=45 Identities=9% Similarity=0.169 Sum_probs=26.3
Q ss_pred HHHHHHHHHhhCCCCCCCHH-----------H-HHHHHHHHHHHHHHHHHHHHHhhh
Q 009666 404 KRSIQELVNQIDPSERLDPD-----------V-EDILVDIAEDFVESITMFGCSLAK 448 (529)
Q Consensus 404 KrKLqELVrqIDPsesLDpD-----------V-EELLLeIADDFVDsVvs~ACrLAK 448 (529)
++.|.+|++.+.....||++ - +|++.+|.+.|++++-..--.|.+
T Consensus 7 ~~~~~~~~~~~~~~~~lD~~~~~L~~L~~~~~~~~~~~elv~~Fl~d~~~~l~~L~~ 63 (149)
T 1yvi_A 7 RDQLTALLSSMFSQGLVDEQFQQLQMLQDEGGTPGFVSEVVTLFCDDADRIINEIAT 63 (149)
T ss_dssp HHHHHHHHHHHHHTTSCCHHHHHHHHHHC---CTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccccccccHHHHHHHHhhCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566666666666666654 1 345566677777776544444443
No 155
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=45.93 E-value=1.1e+02 Score=24.81 Aligned_cols=27 Identities=4% Similarity=-0.011 Sum_probs=18.0
Q ss_pred HHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 440 TMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 440 vs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
+..+.+..-..+...|+..++.-.|+.
T Consensus 86 ~~~~F~~~D~d~~G~I~~~E~~~~l~~ 112 (179)
T 2f2o_A 86 IREAFRVFDKDGNGYISAAELRHVMTN 112 (179)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 445555555556677888888777765
No 156
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=45.38 E-value=13 Score=39.02 Aligned_cols=63 Identities=10% Similarity=0.154 Sum_probs=42.0
Q ss_pred HHHHHHHHhhCCCCCCCHHH-HHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 405 RSIQELVNQIDPSERLDPDV-EDILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 405 rKLqELVrqIDPsesLDpDV-EELLLeIADDF----VDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
..-.++++..-.+..++++| .+.|.++++.| |..||..|+.+|-.++...|+.+|+.-.|+|-
T Consensus 383 ~~R~~Ilk~~l~~~~l~~dvdl~~LA~~T~GfSGADI~~l~~eAa~~Air~~~~~it~~Df~~Al~kV 450 (467)
T 4b4t_H 383 EGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKV 450 (467)
T ss_dssp HHHHHHHHHHHTTSCBCSSCCHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHH
Confidence 33334444333334444443 34556665544 78899999999988899999999999888874
No 157
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=45.34 E-value=86 Score=24.68 Aligned_cols=29 Identities=3% Similarity=-0.043 Sum_probs=18.9
Q ss_pred HHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 438 SITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 438 sVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
..+..+.++.-..+...|+..++.-.|+.
T Consensus 96 ~~~~~~F~~~D~d~~G~I~~~e~~~~l~~ 124 (162)
T 1top_A 96 EELANCFRIFDKNADGFIDIEELGEILRA 124 (162)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 33455555555566777888888777754
No 158
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=45.20 E-value=12 Score=36.51 Aligned_cols=108 Identities=15% Similarity=0.158 Sum_probs=67.0
Q ss_pred CCccCCHHHHHHHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHH----Hhhh--hcCCCCcchhhHHHHHhhccCc
Q 009666 398 GNRILTKRSIQELVNQI-DPSERLDPDVEDILVDIAEDFVESITMFGC----SLAK--HRKSDTLEAKDILVHLERNWNM 470 (529)
Q Consensus 398 ~nrILtKrKLqELVrqI-DPsesLDpDVEELLLeIADDFVDsVvs~AC----rLAK--HRKSdTLEvKDVQLhLERnWNI 470 (529)
----|+-+....+++.| |.-.++|++-.+...+=+++|++.+-...- +|++ .++...|...|.--||.|.||+
T Consensus 144 PHvWldp~n~~~~a~~I~~~L~~~DP~~a~~Y~~Na~~~~~~L~~Ld~~~~~~l~~~~~~~r~~v~~H~af~Yfa~~yGL 223 (321)
T 1xvl_A 144 PHAWMSPRNALVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGM 223 (321)
T ss_dssp CCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCEEEEEESTTHHHHHHTTC
T ss_pred CCcCCCHHHHHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCEEEEECchHHHHHHHCCC
Confidence 33466777777777777 334567888888888888888877654433 3442 3344567778999999999999
Q ss_pred ccCCCCcccccccCCCCCchHHHHHHHHHHHHHhhhhhheee
Q 009666 471 TLPGFSGDEIKTFRKPLVCDIHKERLAAVSFTLDIMCLLVIY 512 (529)
Q Consensus 471 ~IPGFssDEIR~~RK~~ptEaHKQRMALIRKtiK~m~~~~~~ 512 (529)
.+-|+.. +.+ ..|-=-++|+.|.+.+|+--.-+||
T Consensus 224 ~~~~~~~--~~~-----~~eps~~~l~~l~~~ik~~~v~~If 258 (321)
T 1xvl_A 224 EEIYMWP--INA-----EQQFTPKQVQTVIEEVKTNNVPTIF 258 (321)
T ss_dssp EEEEEES--SSS-----SCSCCHHHHHHHHHHHHTTTCSEEE
T ss_pred eEEEeec--cCC-----CCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 8644321 111 1112234566666666665444444
No 159
>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1
Probab=44.99 E-value=2.4 Score=35.02 Aligned_cols=24 Identities=8% Similarity=0.429 Sum_probs=21.6
Q ss_pred cCCCCcchhhHHHHHhhccCcccC
Q 009666 450 RKSDTLEAKDILVHLERNWNMTLP 473 (529)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IP 473 (529)
-|-|.|++-+|.+.||++||+.||
T Consensus 53 lGlDSL~~veLv~~lE~~fgI~i~ 76 (105)
T 2jq4_A 53 AGLSSFASVQLMLGIEEAFDIEFP 76 (105)
T ss_dssp GTCCHHHHHHHHHHHHHHHSCCCC
T ss_pred cCCCHHHHHHHHHHHHHHHCCCcC
Confidence 467889999999999999999987
No 160
>2dzn_B 26S protease regulatory subunit 6B homolog; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} PDB: 2dzo_B
Probab=44.37 E-value=18 Score=28.23 Aligned_cols=32 Identities=9% Similarity=0.014 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 436 VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 436 VDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
|..|+..|+..|-+|+...|+.+|+.-.|++.
T Consensus 37 i~~l~~eAa~~ai~~~~~~i~~~df~~Al~~v 68 (82)
T 2dzn_B 37 IAAIMQEAGLRAVRKNRYVILQSDLEEAYATQ 68 (82)
T ss_dssp HHHHHHHHHHHHHHTTCSEECHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhccCCcCHHHHHHHHHHH
Confidence 56788899999999999999999999999885
No 161
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=44.32 E-value=31 Score=30.81 Aligned_cols=62 Identities=13% Similarity=0.083 Sum_probs=40.9
Q ss_pred CCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 402 LTKRSIQELVNQID--PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 402 LtKrKLqELVrqID--PsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
++.+.+.++++++- .+..+|+++.+.|.+.++.-+..++....+++.. ...|+.+||.-.+.
T Consensus 161 ~~~~~~~~~l~~~~~~~~~~i~~~~l~~l~~~~~G~~r~~~~~l~~~~~~--~~~i~~~~v~~~~~ 224 (319)
T 2chq_A 161 VPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAI--GEVVDADTIYQITA 224 (319)
T ss_dssp CCHHHHHHHHHHHHHTTCCCBCHHHHHHHHHTTTTCHHHHHHHHHHHHHS--SSCBCHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHc--CCCCCHHHHHHHHC
Confidence 46677777777652 3457899999998888776666666655555543 23577777754443
No 162
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=44.12 E-value=57 Score=27.94 Aligned_cols=34 Identities=21% Similarity=0.388 Sum_probs=17.7
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHH
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILV 429 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLL 429 (529)
+.+++..|++..|.++++.++. ..-++++++++.
T Consensus 67 D~d~~G~Is~~El~~~l~~~g~-~~~~~~~~~l~~ 100 (197)
T 3pm8_A 67 DVDNSGTLSSQEILDGLKKIGY-QKIPPDIHQVLR 100 (197)
T ss_dssp CTTCSSEECHHHHHHHHHHHC-----CHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHhCC-CCCHHHHHHHHH
Confidence 3455666777777777777632 223344444443
No 163
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=43.98 E-value=90 Score=24.65 Aligned_cols=34 Identities=12% Similarity=0.116 Sum_probs=21.0
Q ss_pred CcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH
Q 009666 396 EFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI 431 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI 431 (529)
.+++..|++..|..+++.++. .++++..+.|...
T Consensus 25 ~~~~G~i~~~e~~~~l~~~~~--~~~~~~~~~l~~~ 58 (158)
T 2jnf_A 25 PEGSGRVSTDQIGIILEVLGI--QQTKSTIRQLIDE 58 (158)
T ss_dssp SSSCSSEEHHHHHHHHHHTTC--SCSHHHHHHHHHH
T ss_pred CCCCCcCcHHHHHHHHHHhCC--CCCHHHHHHHHHH
Confidence 566677888888888887743 3444433334433
No 164
>3ncv_A DNA mismatch repair protein MUTL; endonuclease, dimer, hydrolase; HET: DNA; 2.40A {Neisseria gonorrhoeae}
Probab=43.79 E-value=13 Score=34.81 Aligned_cols=39 Identities=10% Similarity=0.083 Sum_probs=30.6
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCCCCcc
Q 009666 439 ITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGD 478 (529)
Q Consensus 439 Vvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssD 478 (529)
+...||+.|-..| +.|....+.--|++-+.+..|.+...
T Consensus 161 ~as~ACr~AIk~g-~~Ls~~Em~~Ll~~L~~~~~P~~CPH 199 (220)
T 3ncv_A 161 LATMSCHGSIRAG-RRLTLPEMNALLRDMENTPRSNQCNH 199 (220)
T ss_dssp HHHHTTCSSSCSS-CCCCHHHHHHHHHHHHTSTTTTBCTT
T ss_pred HHHHHHHhhhhcC-CCCCHHHHHHHHHHHHhCCCCCcCCC
Confidence 4578899887665 56899999888888888888877654
No 165
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=43.21 E-value=30 Score=26.30 Aligned_cols=64 Identities=8% Similarity=0.089 Sum_probs=41.9
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH--HHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIA--EDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIA--DDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
.+++..|.+|++.+|.+..|+-+ |++.-+. ++- ..-+..+.++.-..+...|+.+|+...|.+.
T Consensus 6 ~~t~~e~~~~~~~~d~~g~i~~~--ef~~~~~~~~~~-~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 71 (110)
T 1pva_A 6 LLKADDIKKALDAVKAEGSFNHK--KFFALVGLKAMS-ANDVKKVFKAIDADASGFIEEEELKFVLKSF 71 (110)
T ss_dssp HSCHHHHHHHHHHTCSTTCCCHH--HHHHHHTCTTSC-HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT
T ss_pred cCCHHHHHHHHHhcCCCCcCcHH--HHHHHHccCcch-HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 46889999999999977777743 3332221 111 2334556666666677788888888777664
No 166
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=43.11 E-value=62 Score=26.93 Aligned_cols=34 Identities=24% Similarity=0.309 Sum_probs=21.4
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI 431 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI 431 (529)
+.+++..|++..|..+++.++-. +.++++++..+
T Consensus 49 D~d~~G~i~~~El~~~l~~~g~~---~~~~~~~~~~~ 82 (180)
T 3mse_B 49 DTNHNGSLSHREIYTVLASVGIK---KWDINRILQAL 82 (180)
T ss_dssp CTTCSSSEEHHHHHHHHHHTTCC---HHHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHcCCC---HHHHHHHHHHh
Confidence 45666788888888888877532 24454444433
No 167
>1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus}
Probab=42.92 E-value=5.6 Score=29.55 Aligned_cols=26 Identities=15% Similarity=0.472 Sum_probs=21.0
Q ss_pred hcCCCCcchhhHHHHHhhccCcccCC
Q 009666 449 HRKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 449 HRKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
.-|-|.|.+-++...||+.||+.||-
T Consensus 34 ~lG~DSl~~~~l~~~le~~fgi~i~~ 59 (80)
T 1x3o_A 34 DLGADSLDTVELIMGLEDEFGLEISD 59 (80)
T ss_dssp TTCCCHHHHHHHHHHHHHHHCCCCCH
T ss_pred hcCccHHHHHHHHHHHHHHHCCCcCH
Confidence 34667778888999999999999863
No 168
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=42.59 E-value=1.2e+02 Score=23.53 Aligned_cols=35 Identities=20% Similarity=0.346 Sum_probs=20.0
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI 431 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI 431 (529)
+.+++..|++..|..+++.+.. .++++..+.|...
T Consensus 16 D~d~~G~i~~~el~~~l~~~~~--~~~~~~~~~l~~~ 50 (142)
T 2bl0_C 16 DSERTGFITKEGLQTVLKQFGV--RVEPAAFNEMFNE 50 (142)
T ss_dssp CTTCSSEEEHHHHHHHHHHHTC--CCCHHHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHhCC--CCCHHHHHHHHHH
Confidence 3455667788888888777643 3444433333333
No 169
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=42.21 E-value=28 Score=26.52 Aligned_cols=23 Identities=17% Similarity=0.401 Sum_probs=19.0
Q ss_pred ccCCHHHHHHHHHhhCCCCCCCH
Q 009666 400 RILTKRSIQELVNQIDPSERLDP 422 (529)
Q Consensus 400 rILtKrKLqELVrqIDPsesLDp 422 (529)
..+++..|.+|++.+|.+..||-
T Consensus 4 ~~~~~~e~~~l~~~~d~~g~i~~ 26 (108)
T 2kyc_A 4 DILSPSDIAAALRDCQAPDSFSP 26 (108)
T ss_dssp SSSCHHHHHHHHTTSCSTTTCCH
T ss_pred ccCCHHHHHHHHHHcCCCCcCCH
Confidence 35789999999999997777773
No 170
>3jux_A Protein translocase subunit SECA; protein translocation, ATPase, conformational change, peptide binding, ATP-binding, cell inner membrane; HET: ADP; 3.10A {Thermotoga maritima} PDB: 3din_A*
Probab=42.11 E-value=6.6 Score=44.06 Aligned_cols=40 Identities=25% Similarity=0.257 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 422 PDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 422 pDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+++.+.+.++.+|+|++++..-|. .+..++..+.-.|+..
T Consensus 666 ~~~~~~i~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~~~ 705 (822)
T 3jux_A 666 KDYDEYLKDIFEDVVSTRVEEFCS------GKNWDIESLKNSLSFF 705 (822)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHSS------TTCCCCHHHHHHTTTS
T ss_pred CcHHHHHHHHHHHHHHHHHHHhCC------hhhccHHHHHHHHHHh
Confidence 346677778888888888877663 3446777787777776
No 171
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=41.92 E-value=68 Score=25.82 Aligned_cols=49 Identities=8% Similarity=0.162 Sum_probs=29.5
Q ss_pred CCccCCHHHHHHHHHhhCCC---CCC-CHHHHHHHHHH---------HHHHHHHHHHHHHHh
Q 009666 398 GNRILTKRSIQELVNQIDPS---ERL-DPDVEDILVDI---------AEDFVESITMFGCSL 446 (529)
Q Consensus 398 ~nrILtKrKLqELVrqIDPs---esL-DpDVEELLLeI---------ADDFVDsVvs~ACrL 446 (529)
+...|++..|..+++..-+. ..+ +++|+++|.++ -+|||.-+...+..+
T Consensus 27 ~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~~~~ 88 (100)
T 3nxa_A 27 VKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGITGPI 88 (100)
T ss_dssp CTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHHGGG
T ss_pred CCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHH
Confidence 35789999999999875332 112 34566666554 356776655544433
No 172
>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}
Probab=41.62 E-value=3.4 Score=31.10 Aligned_cols=26 Identities=19% Similarity=0.593 Sum_probs=21.9
Q ss_pred hcCCCCcchhhHHHHHhhccCcccCC
Q 009666 449 HRKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 449 HRKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
.-|-|.|.+-++...||+.||+.||-
T Consensus 35 dlG~DSl~~~el~~~le~~fgi~i~~ 60 (81)
T 2lol_A 35 DLKADSLDTVELMMAIEVEYGIDIPD 60 (81)
T ss_dssp HTTCCHHHHHHHHHHHHHHHCCCCCG
T ss_pred hcCCcHHHHHHHHHHHHHHHCCCCCH
Confidence 34777788889999999999999874
No 173
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=41.59 E-value=31 Score=30.87 Aligned_cols=63 Identities=13% Similarity=0.058 Sum_probs=39.9
Q ss_pred cCCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 401 ILTKRSIQELVNQID--PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 401 ILtKrKLqELVrqID--PsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
-++...+.++++++- .+..+|+++.+.|.++++--+..++....+++... ..|+.+||.-.+.
T Consensus 165 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~G~~r~a~~~l~~~~~~~--~~i~~~~v~~~~~ 229 (323)
T 1sxj_B 165 KLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGH--GLVNADNVFKIVD 229 (323)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHTTCHHHHHHHHHHHHHHH--SSBCHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhcC--CCcCHHHHHHHHC
Confidence 356777777777652 34568999999999988765555555555554332 3466666654443
No 174
>1dlw_A Hemoglobin; oxygen storage/transport complex; HET: HEM; 1.54A {Paramecium caudatum} SCOP: a.1.1.1 PDB: 1uvy_A*
Probab=41.40 E-value=43 Score=27.26 Aligned_cols=80 Identities=11% Similarity=0.130 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCC---CCcccccc-cCCCCCchHHHHH-HHHH
Q 009666 425 EDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPG---FSGDEIKT-FRKPLVCDIHKER-LAAV 499 (529)
Q Consensus 425 EELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPG---FssDEIR~-~RK~~ptEaHKQR-MALI 499 (529)
|+.|..|+|+|.+.|... -.|+..-.. .+.....-.|..-|-..+-| |....++. -.....+++|..| ++++
T Consensus 9 ~~~i~~lv~~FY~~v~~d-p~l~~~F~~--~d~~~~~~~l~~fl~~~~gGp~~Y~g~~m~~~H~~~~I~~~~f~~wl~~~ 85 (116)
T 1dlw_A 9 QAAVQAVTAQFYANIQAD-ATVATFFNG--IDMPNQTNKTAAFLCAALGGPNAWTGRNLKEVHANMGVSNAQFTTVIGHL 85 (116)
T ss_dssp HHHHHHHHHHHHHHHHTC-TTTGGGGTT--CCHHHHHHHHHHHHHHHTTCSSCCCSCCHHHHHTTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC-HHHHHhcCC--CCHHHHHHHHHHHHHHHhCCCccCCCcCHHHHhcCCCcCHHHHHHHHHHH
Confidence 677889999999998774 334443322 23333444444444444433 33333332 1233456666655 6778
Q ss_pred HHHHhhhh
Q 009666 500 SFTLDIMC 507 (529)
Q Consensus 500 RKtiK~m~ 507 (529)
++++++..
T Consensus 86 ~~al~~~~ 93 (116)
T 1dlw_A 86 RSALTGAG 93 (116)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 88888864
No 175
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=41.00 E-value=84 Score=21.46 Aligned_cols=43 Identities=5% Similarity=-0.014 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 424 VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 424 VEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
...+|..+...+-+..+....+.+-..+...|+..+..-.+.+
T Consensus 22 ~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 22 VKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred HHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 3333444444444455555556665566777888888666543
No 176
>1nkt_A Preprotein translocase SECA 1 subunit; preprotein translocation, ATPase, transmembrane transport, helicase-like motor domain; HET: ADP; 2.60A {Mycobacterium tuberculosis} SCOP: a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19 PDB: 1nl3_A
Probab=40.88 E-value=10 Score=42.94 Aligned_cols=48 Identities=8% Similarity=0.191 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccC
Q 009666 423 DVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLP 473 (529)
Q Consensus 423 DVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IP 473 (529)
++.+.+.+|.++.|++++...+ .....+..+++.+.-.|+..|++.++
T Consensus 697 ~~~~~i~~~~~~~~~~~v~~~~---~~~~~~~w~~~~l~~~~~~~~~~~~~ 744 (922)
T 1nkt_A 697 NLKDQALDMVRDVITAYVDGAT---GEGYAEDWDLDALWTALKTLYPVGIT 744 (922)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTT---SSSCSSCSCHHHHHHHHHHHSCCCSC
T ss_pred cHHHHHHHHHHHHHHHHHHHhc---ccCCchhcCHHHHHHHHHHHcCCCCC
Confidence 3445566666666666664322 11122345677788888888876543
No 177
>3kdg_A DNA mismatch repair protein MUTL; endonuclease, DNA damage, DNA repair, hydrolase; HET: DNA; 2.00A {Bacillus subtilis} PDB: 3gab_A* 3kdk_A*
Probab=40.28 E-value=23 Score=32.05 Aligned_cols=39 Identities=15% Similarity=0.151 Sum_probs=26.7
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCCCCcc
Q 009666 439 ITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGD 478 (529)
Q Consensus 439 Vvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssD 478 (529)
+.+.||+.|-..| +.|....+.--|++-..+..|.+...
T Consensus 138 ~~~~ACr~AIk~g-~~Ls~~Em~~Ll~~L~~~~~p~~CpH 176 (197)
T 3kdg_A 138 AIMMSCKGSIKAN-RHLRNDEIKALLDDLRSTSDPFTCPH 176 (197)
T ss_dssp HHHHHHCC----C-CCCCHHHHHHHHHHHHHSSCTTBCTT
T ss_pred HHHHhhHhhccCC-CCCCHHHHHHHHHHHHcCCCCCcCCC
Confidence 5578999998666 56888888888887777887776554
No 178
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=39.97 E-value=53 Score=24.76 Aligned_cols=21 Identities=14% Similarity=0.295 Sum_probs=13.8
Q ss_pred CCcCCccCCHHHHHHHHHhhC
Q 009666 395 DEFGNRILTKRSIQELVNQID 415 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqID 415 (529)
+.+++..|++..+.++++.++
T Consensus 10 D~~~~g~i~~~e~~~~l~~~~ 30 (134)
T 1jfj_A 10 DVNGDGAVSYEEVKAFVSKKR 30 (134)
T ss_dssp CTTCSSEEEHHHHHHHHHTTC
T ss_pred CCCCCCcCCHHHHHHHHHHcC
Confidence 345556677777777777654
No 179
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=39.58 E-value=1.5e+02 Score=23.99 Aligned_cols=121 Identities=8% Similarity=0.068 Sum_probs=60.9
Q ss_pred CcCCccCCHHHHHHHHHhhCCC---CCCCHHHHHHHHHHH----------HHHHH-----HHHHHHHHhhhhcCCCCcch
Q 009666 396 EFGNRILTKRSIQELVNQIDPS---ERLDPDVEDILVDIA----------EDFVE-----SITMFGCSLAKHRKSDTLEA 457 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPs---esLDpDVEELLLeIA----------DDFVD-----sVvs~ACrLAKHRKSdTLEv 457 (529)
.+++..|++..|.++++.+... ..++++..+.|...+ +||+. ..+..+.++.-..+...|+.
T Consensus 12 ~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~ 91 (167)
T 1gjy_A 12 AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDSDRSGTVDP 91 (167)
T ss_dssp CCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHHHHHHHHHHHCTTCCSEECH
T ss_pred cCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCCH
Confidence 4455566777777777766432 133333333333332 24443 23455566666667778999
Q ss_pred hhHHHHHhhccCcccCCCCcccccc----c--CCCCCchHHHHHHHHHHHHHhhhhhheeeecceeeEe
Q 009666 458 KDILVHLERNWNMTLPGFSGDEIKT----F--RKPLVCDIHKERLAAVSFTLDIMCLLVIYKDACLSVH 520 (529)
Q Consensus 458 KDVQLhLERnWNI~IPGFssDEIR~----~--RK~~ptEaHKQRMALIRKtiK~m~~~~~~~~~~~~~~ 520 (529)
.++.-.|+. .|.. ...++++. + .....-++...-|..+....+.+..+-.-+|..+++.
T Consensus 92 ~el~~~l~~-~g~~---~~~~~~~~~~~~~d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~ 156 (167)
T 1gjy_A 92 QELQKALTT-MGFR---LNPQTVNSIAKRYSTSGKITFDDYIACCVKLRALTDSFRRRDSAQQGMVNFS 156 (167)
T ss_dssp HHHHHHHHT-TTCC---CCHHHHHHHHHHTCBTTBEEHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEE
T ss_pred HHHHHHHHH-cCCC---CCHHHHHHHHHHhCcCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCeeEEee
Confidence 999888875 3433 22223221 1 0111224555555444444444444444455556554
No 180
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=39.36 E-value=76 Score=33.32 Aligned_cols=36 Identities=11% Similarity=0.434 Sum_probs=22.0
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI 431 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI 431 (529)
|.+++-.|++..|.++++.++-. .-++|+++++.++
T Consensus 312 DkDgdG~IS~eELk~aLrsLG~~-~TeeEI~~Lf~~~ 347 (440)
T 3u0k_A 312 DKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEV 347 (440)
T ss_dssp CTTCSSEECHHHHHHHHHHTTCC-CCHHHHHHHHHHH
T ss_pred cCCCCCEECHHHHHHHHHHcCCC-CCHHHHHHHHHHh
Confidence 34677778888888888877432 2234455555444
No 181
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=39.16 E-value=94 Score=25.38 Aligned_cols=77 Identities=10% Similarity=0.004 Sum_probs=40.2
Q ss_pred HHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCCCCcccccc----cC---CCCCchHHHHHHHHHHHHHhhhhhheee
Q 009666 440 TMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGDEIKT----FR---KPLVCDIHKERLAAVSFTLDIMCLLVIY 512 (529)
Q Consensus 440 vs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssDEIR~----~R---K~~ptEaHKQRMALIRKtiK~m~~~~~~ 512 (529)
+..+.++.-..+...|+.+++.-.|+.. |..+ ..++++. +. ....-++...-|..+....+.+..+-.-
T Consensus 79 ~~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~---~~~~~~~~~~~~dd~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d 154 (173)
T 1alv_A 79 WQAIYKQFDVDRSGTIGSSELPGAFEAA-GFHL---NEHLYSMIIRRYSDEGGNMDFDNFISCLVRLDAMFRAFKSLDKD 154 (173)
T ss_dssp HHHHHHHHCTTCCSSBCTTTHHHHHHHH-TCCC---CHHHHHHHHHHHTCSSSCBCHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHc-CCCC---CHHHHHHHHHHhcCCCCcCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4556666666677889999998888653 4332 2222211 11 1122234444444444444444444445
Q ss_pred ecceeeEe
Q 009666 513 KDACLSVH 520 (529)
Q Consensus 513 ~~~~~~~~ 520 (529)
+|.++++-
T Consensus 155 ~~G~i~~~ 162 (173)
T 1alv_A 155 GTGQIQVN 162 (173)
T ss_dssp CCSEEEEE
T ss_pred CCCeecHh
Confidence 56666654
No 182
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=39.16 E-value=46 Score=33.41 Aligned_cols=65 Identities=9% Similarity=0.154 Sum_probs=46.0
Q ss_pred CCHHHHHHHHHhhCC------CCCCCHHHHHHHHHHHHHHHH---------HHHHHHHHhhhhcCCC-CcchhhHHHHHh
Q 009666 402 LTKRSIQELVNQIDP------SERLDPDVEDILVDIAEDFVE---------SITMFGCSLAKHRKSD-TLEAKDILVHLE 465 (529)
Q Consensus 402 LtKrKLqELVrqIDP------sesLDpDVEELLLeIADDFVD---------sVvs~ACrLAKHRKSd-TLEvKDVQLhLE 465 (529)
.+...+.++++.+-. +..|++++.+.+.++++.|+. +++..+|..++.+... .-+++++.-.|+
T Consensus 325 p~~e~~~~iL~~~~~~~~~~~~~~i~~~al~~l~~~s~~~~~~~~lp~~ai~ll~~a~~~~~~~~~~~p~~i~~l~~~i~ 404 (468)
T 3pxg_A 325 PSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLD 404 (468)
T ss_dssp CCHHHHHHHHHHTTTTSGGGSSCSCCHHHHHHHHHHHHHSSCCSCTTHHHHHHHHHHHHHHHHHTTSCCSSTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCcCCcHHHHHHHHHHHHHHhccCCCchHHHHHHHHHH
Confidence 367778888887643 457999999999999998763 4677788877766543 345666655544
Q ss_pred h
Q 009666 466 R 466 (529)
Q Consensus 466 R 466 (529)
+
T Consensus 405 ~ 405 (468)
T 3pxg_A 405 E 405 (468)
T ss_dssp H
T ss_pred H
Confidence 4
No 183
>4hw4_A Induced myeloid leukemia cell differentiation Pro 1; anti-apoptotic protein, BH3 peptides, apoptosis; 1.53A {Homo sapiens} PDB: 3kj0_A 2pqk_A 3kj1_A 3kj2_A 3kz0_A 3mk8_A 2kbw_A 4hw3_A* 4hw2_A* 3d7v_A 3io9_A 2nl9_A* 2nla_A 4g35_A* 1wsx_A 2jm6_B 2roc_A 2rod_A 3mk8_B
Probab=39.00 E-value=25 Score=31.59 Aligned_cols=46 Identities=22% Similarity=0.345 Sum_probs=32.4
Q ss_pred HHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH-H---------HHHHHHhhhhcCC
Q 009666 404 KRSIQELVNQIDPSERLDPDVEDILVDIAEDFVES-I---------TMFGCSLAKHRKS 452 (529)
Q Consensus 404 KrKLqELVrqIDPsesLDpDVEELLLeIADDFVDs-V---------vs~ACrLAKHRKS 452 (529)
.+.+.+|+++++-.. +++.+.+.++||+..+| | +.|++.||+|-..
T Consensus 55 ~~~f~~m~~~L~it~---~~a~~~F~~Va~elF~dGi~NWGRIVaLfaFgg~la~~~~~ 110 (157)
T 4hw4_A 55 ETAFQGMLRKLDIKN---EDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAKHLKT 110 (157)
T ss_dssp HHHHHHHHHHHCCCS---HHHHHHHHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCC---chHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHHHHHH
Confidence 345778888876543 35556788999985444 3 7899999987654
No 184
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=38.93 E-value=64 Score=25.46 Aligned_cols=61 Identities=8% Similarity=0.152 Sum_probs=33.6
Q ss_pred HHHHHHhhCCC--CCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccC
Q 009666 407 IQELVNQIDPS--ERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWN 469 (529)
Q Consensus 407 LqELVrqIDPs--esLDpD-VEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWN 469 (529)
|.++.+.+|.+ ..|+.+ ...+|..+. .-+..+...++.+-..+...|+..+..-.|.+.|+
T Consensus 100 ~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~ 163 (166)
T 3akb_A 100 LHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALDTDGDGKVGETEIVPAFARYFT 163 (166)
T ss_dssp HHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSBCCHHHHHHHHHHHTS
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhc
Confidence 56666666543 345543 333333321 22233333344444466778999999888888776
No 185
>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A*
Probab=38.92 E-value=4.8 Score=32.63 Aligned_cols=27 Identities=19% Similarity=0.541 Sum_probs=23.0
Q ss_pred hhcCCCCcchhhHHHHHhhccCcccCC
Q 009666 448 KHRKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 448 KHRKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
..-|-|.|++-+|...||++||+.|+-
T Consensus 50 ~dLGlDSL~~vel~~~lE~~fgi~i~~ 76 (97)
T 3ejb_A 50 EDLGADSLDTVELVMALEEEFDTEIPD 76 (97)
T ss_dssp TTTCCCTTHHHHHHHHHHHHTTCCCCH
T ss_pred hhcCCCHHHHHHHHHHHHHHHCCCCCH
Confidence 345788899999999999999999864
No 186
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=38.71 E-value=45 Score=28.13 Aligned_cols=35 Identities=14% Similarity=0.343 Sum_probs=20.0
Q ss_pred CcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH
Q 009666 396 EFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIA 432 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIA 432 (529)
.+++..|++..|..+++.++ ..|+++-.+.|++.+
T Consensus 96 ~d~~G~I~~~el~~~l~~~g--~~ls~~e~~~l~~~~ 130 (159)
T 3i5g_C 96 REGQGLISSAEIRNVLKMLG--ERITEDQCNDIFTFC 130 (159)
T ss_dssp TTSSSEECHHHHHHHHHHSS--SCCCHHHHHHHHHHT
T ss_pred cCCCCcCcHHHHHHHHHHhC--CCCCHHHHHHHHHHh
Confidence 45566777777777777663 455554333333333
No 187
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=38.62 E-value=78 Score=28.84 Aligned_cols=47 Identities=21% Similarity=0.275 Sum_probs=39.6
Q ss_pred HHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Q 009666 406 SIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKS 452 (529)
Q Consensus 406 KLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKS 452 (529)
.|+.|+..-++..-++.|+-+++.+=-++|...|-....+.|+....
T Consensus 113 ~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~~~ 159 (201)
T 3k9o_A 113 SLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVS 159 (201)
T ss_dssp HHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcccccc
Confidence 46667776688889999999999999999999999999999986443
No 188
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=38.20 E-value=20 Score=28.79 Aligned_cols=70 Identities=9% Similarity=0.028 Sum_probs=35.8
Q ss_pred CcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH--------HHHHHHHH--------------HHHHHHhhhhcCCC
Q 009666 396 EFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI--------AEDFVESI--------------TMFGCSLAKHRKSD 453 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI--------ADDFVDsV--------------vs~ACrLAKHRKSd 453 (529)
.+++..|++..|..+++.++.. .-+.++++++..+ -++|+.-+ +..+.++.-..+..
T Consensus 22 ~d~~G~i~~~el~~~l~~lg~~-~~~~~~~~l~~~~d~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G 100 (159)
T 2ovk_C 22 DGRDGDVDAAKVGDLLRCLGMN-PTEAQVHQHGGTKKMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQG 100 (159)
T ss_dssp TTSSSEEEGGGHHHHHHHTTCC-CCHHHHHHTTCCSSTTSCEEEHHHHHHHHHHHTTCSTTCCHHHHHHHHHHTCTTSSS
T ss_pred CCCCCCCcHHHHHHHHHHcCCC-CCHHHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhccCCCcHHHHHHHHHHHCCCCCC
Confidence 4556677777788887776432 1122333333222 23454333 33344444444555
Q ss_pred CcchhhHHHHHhh
Q 009666 454 TLEAKDILVHLER 466 (529)
Q Consensus 454 TLEvKDVQLhLER 466 (529)
.|+..++.-.|.+
T Consensus 101 ~I~~~El~~~l~~ 113 (159)
T 2ovk_C 101 LISSAEIRNVLKM 113 (159)
T ss_dssp EECHHHHHHHHHH
T ss_pred cCcHHHHHHHHHH
Confidence 6666666666554
No 189
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=37.77 E-value=12 Score=35.86 Aligned_cols=106 Identities=8% Similarity=0.062 Sum_probs=64.7
Q ss_pred CccCCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----hhhhcC--CCCcchhhHHHHHhhccCcc
Q 009666 399 NRILTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMFGCS----LAKHRK--SDTLEAKDILVHLERNWNMT 471 (529)
Q Consensus 399 nrILtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvs~ACr----LAKHRK--SdTLEvKDVQLhLERnWNI~ 471 (529)
---|+-.....+++.|. .-.++|++-.+...+=+++|+..+-...-+ |++..+ ...|...|.--||.|.||+.
T Consensus 124 HvWldp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yf~~~yGl~ 203 (294)
T 3hh8_A 124 HAWLNLENGIIYSKNIAKQLIAKDPKNKETYEKNLKAYVAKLEKLDKEAKSKFDAIAENKKLIVTSEGCFKYFSKAYGVP 203 (294)
T ss_dssp CGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCGGGCCEEEEESCCHHHHHHHTCC
T ss_pred ceeCCHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccCcEEEEECChHHHHHHHcCCc
Confidence 34567777777777773 345678887788888888888877555433 444443 55566789888999999998
Q ss_pred cCCCCcccccccCCCCCchHHHHHHHHHHHHHhhhhhhee
Q 009666 472 LPGFSGDEIKTFRKPLVCDIHKERLAAVSFTLDIMCLLVI 511 (529)
Q Consensus 472 IPGFssDEIR~~RK~~ptEaHKQRMALIRKtiK~m~~~~~ 511 (529)
+-|+- ++.+-. .++ -.+|+.|.+.||+--.-+|
T Consensus 204 ~~~~~--~~~~~~--eps---~~~l~~l~~~ik~~~v~~i 236 (294)
T 3hh8_A 204 SAYIW--EINTEE--EGT---PDQISSLIEKLKVIKPSAL 236 (294)
T ss_dssp EEEEE--SSCCSC--CCC---HHHHHHHHHHHHHSCCSCE
T ss_pred eeecc--ccCCCC--CCC---HHHHHHHHHHHHHcCCCEE
Confidence 64331 111111 112 3456666666665444333
No 190
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=37.61 E-value=49 Score=25.01 Aligned_cols=19 Identities=0% Similarity=0.053 Sum_probs=11.0
Q ss_pred hcCCCCcchhhHHHHHhhc
Q 009666 449 HRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 449 HRKSdTLEvKDVQLhLERn 467 (529)
-.+...|+..+..-.+.+.
T Consensus 72 ~d~dg~I~~~EF~~~~~~~ 90 (91)
T 2pmy_A 72 ADRDGAITFQEFARGFLGS 90 (91)
T ss_dssp TTCSSEECHHHHTHHHHHT
T ss_pred CCCCCCEeHHHHHHHHHHH
Confidence 3445567777766555543
No 191
>3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma}
Probab=37.38 E-value=2.6 Score=35.13 Aligned_cols=27 Identities=22% Similarity=0.505 Sum_probs=23.0
Q ss_pred hhcCCCCcchhhHHHHHhhccCcccCC
Q 009666 448 KHRKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 448 KHRKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
..-+-|.|++-+|.+.||+.||+.||-
T Consensus 51 ~dLglDSL~~veli~~lE~~fgi~i~~ 77 (107)
T 3ce7_A 51 EDRLWDCLDTVEFVLDVEEIFDVTVPD 77 (107)
T ss_dssp TSSBCCHHHHHHHHHHHHHHHTCCCCH
T ss_pred cccCCCHHHHHHHHHHHHHHHCCCCCH
Confidence 345778889999999999999999874
No 192
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=37.29 E-value=36 Score=34.89 Aligned_cols=64 Identities=8% Similarity=0.034 Sum_probs=41.0
Q ss_pred HHHHHHHHHhhCCCCCCCHHH-HHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 404 KRSIQELVNQIDPSERLDPDV-EDILVDIAED----FVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 404 KrKLqELVrqIDPsesLDpDV-EELLLeIADD----FVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
...-.++++..-.+..+++|+ .+.|.+.++. -|..||..|+.+|-.++...|+.+|+...|+|-
T Consensus 321 ~~~R~~Il~~~~~~~~l~~dvdl~~lA~~t~G~SGADi~~l~~eA~~~Air~~~~~vt~~Df~~Al~~v 389 (405)
T 4b4t_J 321 VAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVGKV 389 (405)
T ss_dssp HHHHHHHHHHHHTTSBCCSSCCHHHHHHHCCSCCHHHHHHHHHHHHHHHHHTTCSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCccCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHH
Confidence 333334444333334444443 2333444332 378899999999988888899999999999874
No 193
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=37.24 E-value=63 Score=26.32 Aligned_cols=27 Identities=7% Similarity=-0.021 Sum_probs=19.8
Q ss_pred HHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 440 TMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 440 vs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
+..+.++.-..+...|+.+++.-.|..
T Consensus 76 ~~~~F~~~D~d~~G~i~~~el~~~l~~ 102 (172)
T 2znd_A 76 WQNVFRTYDRDNSGMIDKNELKQALSG 102 (172)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCccCHHHHHHHHHH
Confidence 445566665567778999999888866
No 194
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=37.20 E-value=77 Score=23.35 Aligned_cols=21 Identities=10% Similarity=0.245 Sum_probs=14.5
Q ss_pred CCcCCccCCHHHHHHHHHhhC
Q 009666 395 DEFGNRILTKRSIQELVNQID 415 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqID 415 (529)
+.+++..|++..|..+++.+.
T Consensus 19 D~d~~G~i~~~el~~~l~~~g 39 (92)
T 2kn2_A 19 DKDQNGYISASELRHVMINLG 39 (92)
T ss_dssp CTTCSSEECHHHHHHHHHHTT
T ss_pred CCCCCCeEcHHHHHHHHHHhC
Confidence 345556778888888887763
No 195
>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C*
Probab=36.81 E-value=5.9 Score=29.97 Aligned_cols=26 Identities=19% Similarity=0.484 Sum_probs=22.3
Q ss_pred hcCCCCcchhhHHHHHhhccCcccCC
Q 009666 449 HRKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 449 HRKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
.-|-|.|.+-++...||+.||+.||-
T Consensus 33 dlG~DSl~~vel~~~le~~fgi~i~~ 58 (82)
T 2ava_A 33 KLGADSLDTVEIVMNLEEEFGINVDE 58 (82)
T ss_dssp CCTTCCSCHHHHHHHHHHHTTCCCCG
T ss_pred hcCCCHHHHHHHHHHHHHHHCCccCH
Confidence 34677889999999999999999874
No 196
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=36.67 E-value=56 Score=26.83 Aligned_cols=22 Identities=9% Similarity=0.253 Sum_probs=13.6
Q ss_pred hhhcCCCCcchhhHHHHHhhcc
Q 009666 447 AKHRKSDTLEAKDILVHLERNW 468 (529)
Q Consensus 447 AKHRKSdTLEvKDVQLhLERnW 468 (529)
+-..+...|+..+..-.+...|
T Consensus 158 ~D~d~dg~i~~~eF~~~~~~~~ 179 (195)
T 1qv0_A 158 CDLDNAGDLDVDEMTRQHLGFW 179 (195)
T ss_dssp SCCCTTSCEEHHHHHHHHHHHH
T ss_pred hCCCCCCcCCHHHHHHHHHHHc
Confidence 3334556788888766666554
No 197
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=36.58 E-value=48 Score=26.63 Aligned_cols=21 Identities=10% Similarity=0.181 Sum_probs=15.0
Q ss_pred CCcCCccCCHHHHHHHHHhhC
Q 009666 395 DEFGNRILTKRSIQELVNQID 415 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqID 415 (529)
+.+++..|++..|..+++.+.
T Consensus 16 D~d~~G~i~~~El~~~l~~~~ 36 (174)
T 1q80_A 16 DFDKDGAITRMDFESMAERFA 36 (174)
T ss_dssp CTTCSSEESHHHHHHHHHHHH
T ss_pred CCCCCCcEeHHHHHHHHHHHH
Confidence 445666788888888877764
No 198
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=36.42 E-value=68 Score=25.91 Aligned_cols=46 Identities=13% Similarity=0.155 Sum_probs=22.9
Q ss_pred HhhhhcCCCCcchhhHHHHHhh----ccCcccCCCCcccc-cccCCCCCch
Q 009666 445 SLAKHRKSDTLEAKDILVHLER----NWNMTLPGFSGDEI-KTFRKPLVCD 490 (529)
Q Consensus 445 rLAKHRKSdTLEvKDVQLhLER----nWNI~IPGFssDEI-R~~RK~~ptE 490 (529)
+.+-..+...|+..+....+.. .-|..||....+.+ .+.++....|
T Consensus 55 ~~~D~d~dG~I~~~EF~~~~~~~~~~~~G~~lp~~lp~~l~pps~~~~~~~ 105 (111)
T 2kgr_A 55 NLSDIDQDGKLTAEEFILAMHLIDVAMSGQPLPPVLPPEYIPPSFRRVRLE 105 (111)
T ss_dssp HHHCSSCCSEEEHHHHHHHHHHHHHHHTTCCCCSSCCGGGSCTTTTCCCCC
T ss_pred HHHCCCCCCCCcHHHHHHHHHHHHHHHCCCCCccccCcccCCCccCCCccc
Confidence 3444455566766665333222 23567776655544 3344444444
No 199
>1dx0_A Prion protein; brain, repeat; NMR {Bos taurus} SCOP: d.6.1.1 PDB: 1dx1_A 1qlx_A 1qlz_A
Probab=35.96 E-value=45 Score=32.38 Aligned_cols=22 Identities=9% Similarity=0.220 Sum_probs=13.5
Q ss_pred CCCCchHHHHHHHHHHHHHhhhhhh
Q 009666 485 KPLVCDIHKERLAAVSFTLDIMCLL 509 (529)
Q Consensus 485 K~~ptEaHKQRMALIRKtiK~m~~~ 509 (529)
..+.+|.|...|. +.|++||..
T Consensus 184 ~kndte~~vrI~~---rlI~emC~~ 205 (219)
T 1dx0_A 184 GENFTETDIKMME---RVVEQMCIT 205 (219)
T ss_dssp TCCCCHHHHHHHH---HHHHHHHHH
T ss_pred ccCccHHHHHHHH---HHHHHHHHH
Confidence 3344556655444 778888864
No 200
>2xyk_A 2-ON-2 hemoglobin; oxygen storage-transport complex; HET: HEM; 2.10A {Agrobacterium tumefaciens}
Probab=35.54 E-value=60 Score=27.69 Aligned_cols=77 Identities=9% Similarity=0.108 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHHHH--HHhhhhcCCCCcchhhHHHHHhhccC---cccCC---C----Cccccccc-CCCCCchH
Q 009666 425 EDILVDIAEDFVESITMFG--CSLAKHRKSDTLEAKDILVHLERNWN---MTLPG---F----SGDEIKTF-RKPLVCDI 491 (529)
Q Consensus 425 EELLLeIADDFVDsVvs~A--CrLAKHRKSdTLEvKDVQLhLERnWN---I~IPG---F----ssDEIR~~-RK~~ptEa 491 (529)
|+.|..|+|+|.+.|...- -.|...-. .|+.-+++|... -++-| | |...++.. .....+++
T Consensus 15 ~~~i~~lV~~FY~~v~~Dp~~~~l~~~F~------~d~~~~~~~l~~Fl~~~lGGp~~Y~~~~g~p~m~~~H~~~~I~~~ 88 (133)
T 2xyk_A 15 DATVRALTRRFYELMDTLPEAARCRAIHP------ADLSGSEAKFYDYLTGYLGGPPVYVEKHGHPMLRRRHFVAPIGPA 88 (133)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHSC------SSTHHHHHHHHHHHHHHTTSCCHHHHHHCSCCHHHHHTTSCCCHH
T ss_pred HHHHHHHHHHHHHHHHhCccccHHHHhcc------CCHHHHHHHHHHHHHHHcCcCcccccCCCCcCHHHhhcCCCcCHH
Confidence 6789999999999998864 12333322 244455555444 33332 2 22222221 12335666
Q ss_pred HHHH-HHHHHHHHhhhh
Q 009666 492 HKER-LAAVSFTLDIMC 507 (529)
Q Consensus 492 HKQR-MALIRKtiK~m~ 507 (529)
|..| |.+++++|++..
T Consensus 89 ~fd~Wl~~~~~al~e~~ 105 (133)
T 2xyk_A 89 ERDEWLLCFRRAMDETI 105 (133)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 6665 677888888764
No 201
>3cjh_B Mitochondrial import inner membrane translocase S TIM8; cyclic heterohexamer, chaperone, M binding, mitochondrion, protein transport; 2.60A {Saccharomyces cerevisiae}
Probab=35.48 E-value=1.4e+02 Score=22.95 Aligned_cols=48 Identities=17% Similarity=0.239 Sum_probs=38.8
Q ss_pred CCHHHHHHHHHhh----------C-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 009666 402 LTKRSIQELVNQI----------D-PSERLDPDVEDILVDIAEDFVESITMFGCSLAKH 449 (529)
Q Consensus 402 LtKrKLqELVrqI----------D-PsesLDpDVEELLLeIADDFVDsVvs~ACrLAKH 449 (529)
+-+..+++|+.+| + ++..||..-+.=|-.-+|.|+|.-..-+-++++.
T Consensus 5 ~~~~~~~~~~~~lt~~Cf~kCv~~~~~~~L~~~E~~Ci~~Cv~ky~~~~~~v~~~~~~~ 63 (64)
T 3cjh_B 5 NSKQKVQMSIHQFTNICFKKCVESVNDSNLSSQEEQCLSNCVNRFLDTNIRIVNGLQNT 63 (64)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCCCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccCCCCcCChhHhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4578888888887 4 6788999999999999999999876666666654
No 202
>1uw4_B UPF2, regulator of nonsense transcripts 2; nonsense mediated mRNA decay protein, RNA-binding protein, N domain, MIF4G domain; 1.95A {Homo sapiens} SCOP: a.118.1.14
Probab=35.48 E-value=29 Score=33.64 Aligned_cols=62 Identities=15% Similarity=0.203 Sum_probs=39.5
Q ss_pred CHHHHHHHHHhhCCCCCCCHHHHHHHHHHHH-------HHHHHHHHHHHHhhhhcCCCCcc-----hhhHHHHHhhc
Q 009666 403 TKRSIQELVNQIDPSERLDPDVEDILVDIAE-------DFVESITMFGCSLAKHRKSDTLE-----AKDILVHLERN 467 (529)
Q Consensus 403 tKrKLqELVrqIDPsesLDpDVEELLLeIAD-------DFVDsVvs~ACrLAKHRKSdTLE-----vKDVQLhLERn 467 (529)
+-+++-++++++++. |+|+.+.|+++-- +=|..++...+.|++++..-.+. ++||.+-||.|
T Consensus 20 ~~~~vlk~lrKl~W~---D~e~~~~l~k~l~~~~~~ky~nI~~lA~ll~~L~~~~~~~~i~vVD~vlE~Ir~gLE~n 93 (248)
T 1uw4_B 20 TTEKVLRQMRKLPWQ---DQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVN 93 (248)
T ss_dssp SHHHHHHHHHTSCTT---SHHHHHHHHHHHHCGGGSCGGGHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHcCCCC---cHHHHHHHHHHhcchhhcccchHHHHHHHHHHHHhhChHHhhhhHHHHHHHHHHHHhcC
Confidence 345667888888885 7787777776432 22555666677777776543333 45666666665
No 203
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=35.39 E-value=27 Score=32.32 Aligned_cols=77 Identities=9% Similarity=0.122 Sum_probs=43.4
Q ss_pred HHHHHHHHHhh--CCCCCCCHHHHHHHHHHHH--HHHHHHHHHHHHhhh----hcCCCCc-chhhHHHHHhhccCcccCC
Q 009666 404 KRSIQELVNQI--DPSERLDPDVEDILVDIAE--DFVESITMFGCSLAK----HRKSDTL-EAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 404 KrKLqELVrqI--DPsesLDpDVEELLLeIAD--DFVDsVvs~ACrLAK----HRKSdTL-EvKDVQLhLERnWNI~IPG 474 (529)
.+.+.++++.. .-+..|++|+.+.|.+.+. .-+.++++.+|...+ ..+...| +++||+-++...||+.
T Consensus 168 ~~e~~~il~~~~~~~~~~l~~~~l~~l~~~~g~~r~l~~~l~~~~~~~~~~l~~~~~~~i~t~~~i~~~~~~~~~~~--- 244 (324)
T 1l8q_A 168 NKTRFKIIKEKLKEFNLELRKEVIDYLLENTKNVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANYYAVK--- 244 (324)
T ss_dssp HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCSSHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHSCC---
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHhCCCHHHHHHHHHHHHHcCHHHhccccccCCCCHHHHHHHHHHHhCCC---
Confidence 33344444433 1346799999888887650 113445555555410 0122347 7889999999888854
Q ss_pred CCcccccccCC
Q 009666 475 FSGDEIKTFRK 485 (529)
Q Consensus 475 FssDEIR~~RK 485 (529)
.++++..++
T Consensus 245 --~~~i~s~~~ 253 (324)
T 1l8q_A 245 --VEDILSDKR 253 (324)
T ss_dssp --HHHHSSCCC
T ss_pred --HHHHhcCCC
Confidence 345555443
No 204
>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A
Probab=35.30 E-value=5.9 Score=29.11 Aligned_cols=25 Identities=16% Similarity=0.565 Sum_probs=20.6
Q ss_pred hcCCCCcchhhHHHHHhhccCcccC
Q 009666 449 HRKSDTLEAKDILVHLERNWNMTLP 473 (529)
Q Consensus 449 HRKSdTLEvKDVQLhLERnWNI~IP 473 (529)
.-|-|.|.+-++...||+.||+.|+
T Consensus 30 ~lG~DSl~~~~l~~~le~~~gi~i~ 54 (77)
T 2ehs_A 30 DLGADSLDVVELIMAFEEEFGIEIP 54 (77)
T ss_dssp TTCCCHHHHHHHHHHHHHHHTCCCC
T ss_pred ccCCCHHHHHHHHHHHHHHhCCccC
Confidence 3466778888899999999999875
No 205
>1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A*
Probab=35.12 E-value=22 Score=27.08 Aligned_cols=26 Identities=19% Similarity=0.323 Sum_probs=23.1
Q ss_pred cCCCCcchhhHHHHHhhccCcccCCC
Q 009666 450 RKSDTLEAKDILVHLERNWNMTLPGF 475 (529)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IPGF 475 (529)
-|-|.|++-++...||+.||+.||-.
T Consensus 38 lG~DSL~~vel~~~le~~fgi~i~~~ 63 (86)
T 1af8_A 38 IGYDSLALMETAARLESRYGVSIPDD 63 (86)
T ss_dssp TTCCTTTHHHHHHHHTTTTCSCCCTT
T ss_pred cCCCHHHHHHHHHHHHHHHCCCcCHH
Confidence 37888999999999999999999854
No 206
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=34.98 E-value=58 Score=25.02 Aligned_cols=63 Identities=8% Similarity=0.137 Sum_probs=29.8
Q ss_pred CHHHHHHHHHhhCCC--CCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 403 TKRSIQELVNQIDPS--ERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 403 tKrKLqELVrqIDPs--esLDpD-VEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
.+.+|.++.+.+|.+ ..|+.+ ..++|..+...+-+..+...++.+-..+...|+..+..-.+.
T Consensus 27 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp CHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 455666666666543 345432 444444433222223333333334334555677766654443
No 207
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=34.79 E-value=1.4e+02 Score=23.77 Aligned_cols=29 Identities=7% Similarity=0.055 Sum_probs=19.1
Q ss_pred HHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 438 SITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 438 sVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
..+..+.++.-..+...|+..++.-.|..
T Consensus 79 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~ 107 (143)
T 2obh_A 79 EEILKAFKLFDDDETGKISFKNLKRVAKE 107 (143)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 34555666666666777888888776653
No 208
>1zbr_A AAQ65385, conserved hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.60A {Porphyromonas gingivalis} SCOP: d.126.1.6
Probab=34.78 E-value=16 Score=36.80 Aligned_cols=68 Identities=25% Similarity=0.398 Sum_probs=50.2
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhhccC----cccC-C-CCcccc----ccc------------CCCCCchHHHHHH
Q 009666 439 ITMFGCSLAKHRKSDTLEAKDILVHLERNWN----MTLP-G-FSGDEI----KTF------------RKPLVCDIHKERL 496 (529)
Q Consensus 439 Vvs~ACrLAKHRKSdTLEvKDVQLhLERnWN----I~IP-G-FssDEI----R~~------------RK~~ptEaHKQRM 496 (529)
+++..|.|.++|+-. +.-.+|.-.|++.+| |||| | +..||- ..+ .-..+.+.|-+++
T Consensus 159 ltTe~clLn~nRNp~-ls~~eie~~L~~~LGv~kviWL~~G~l~~DdTdgHiD~larFv~p~~vl~~~~~d~~d~~y~~~ 237 (349)
T 1zbr_A 159 LTTDSCLFEPNRNAG-LSRTAIIDTLKESLGVSRVLSLRHGALAGDDTDGHIDTLARFVDTRTIVYVRSEDPSDEHYSDL 237 (349)
T ss_dssp EEEHHHHTCTTTSTT-SCHHHHHHHHHHHSCCSEEEEESSCCCTTCCSSSCGGGSEEEEETTEEEEEECCCTTSTTHHHH
T ss_pred EEeeeeeecCCcCCC-CCHHHHHHHHHHHhCCcEEEEecCCccCCCCcCcchhheEEecCCCEEEEEcCCCCCCccHHHH
Confidence 567899999999987 789999999999999 5788 5 444431 111 1123456678999
Q ss_pred HHHHHHHhhhh
Q 009666 497 AAVSFTLDIMC 507 (529)
Q Consensus 497 ALIRKtiK~m~ 507 (529)
..+.+.|++++
T Consensus 238 ~~~~~~L~~~~ 248 (349)
T 1zbr_A 238 TAMEQELKELR 248 (349)
T ss_dssp HHHHHHHHHCB
T ss_pred HHHHHHHHhhh
Confidence 99999999874
No 209
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=34.73 E-value=49 Score=29.69 Aligned_cols=59 Identities=14% Similarity=0.143 Sum_probs=38.0
Q ss_pred CCHHHHHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHH
Q 009666 402 LTKRSIQELVNQI--DPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILV 462 (529)
Q Consensus 402 LtKrKLqELVrqI--DPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQL 462 (529)
++...+.++++++ ..+..+|+++.+.|.++++.-+..++....+++... ..|+.+||.-
T Consensus 169 l~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~r~~~~~l~~~~~~~--~~i~~~~v~~ 229 (327)
T 1iqp_A 169 LRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALD--KKITDENVFM 229 (327)
T ss_dssp CCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--SEECHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHhcC--CCCCHHHHHH
Confidence 5677888877766 234568999999999888766655555544444322 2455555543
No 210
>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A
Probab=34.71 E-value=4.9 Score=30.26 Aligned_cols=25 Identities=20% Similarity=0.465 Sum_probs=21.2
Q ss_pred cCCCCcchhhHHHHHhhccCcccCC
Q 009666 450 RKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
-|-|.|++-++...||++||+.||-
T Consensus 37 lG~DSl~~vel~~~le~~fgi~i~~ 61 (81)
T 1f80_D 37 LGADXLDVVELVMELEDEFDMEISD 61 (81)
T ss_dssp SCCCHHHHHHHHHHHHHHTTCCCCH
T ss_pred cCCcHHHHHHHHHHHHHHhCCccCH
Confidence 4677788889999999999999863
No 211
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=34.55 E-value=68 Score=33.60 Aligned_cols=103 Identities=13% Similarity=0.015 Sum_probs=56.4
Q ss_pred hhCCCCCCCHHHHHHHH-----------------HHHHHHHHHHHHHHHHhhh--hcCCCCcchhhHHHHHhhccCcccC
Q 009666 413 QIDPSERLDPDVEDILV-----------------DIAEDFVESITMFGCSLAK--HRKSDTLEAKDILVHLERNWNMTLP 473 (529)
Q Consensus 413 qIDPsesLDpDVEELLL-----------------eIADDFVDsVvs~ACrLAK--HRKSdTLEvKDVQLhLERnWNI~IP 473 (529)
.+|-...||.|..+.+. +.+|+.|-.++..-..+-. .-+.-+||+.||+-.|.-.=++-+=
T Consensus 224 ~~D~vividNe~l~~i~~~~~~~~~~~~~~~af~~~aN~~Ia~~I~~I~~~i~~~~~G~iNvD~aDv~t~L~~~~G~a~i 303 (427)
T 3m89_A 224 PLANVIVNDNTQMQRIIESQKGTKDLKNRYVNWKEVANDNVVSTLHEINIIPENYGSDNVTYDPSDLIKLLSIPGRFLTI 303 (427)
T ss_dssp SEEEEEEEEHHHHHHHHHHSSCSSSCCCSCSCHHHHHHHHHHHHHHHHHHHHHHCCCSSSCCCHHHHHHHHHSSCSEEEE
T ss_pred cccEEEEEehHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCCcEeecHHHHHHhCCCCCCeEEE
Confidence 66766677877643322 1445555555444443332 2567789999999999744456666
Q ss_pred CCCcccccccCCCCCchHHHHHHHHHHHHHhh--hhhheeeecc-eeeEeeeee
Q 009666 474 GFSGDEIKTFRKPLVCDIHKERLAAVSFTLDI--MCLLVIYKDA-CLSVHFTYH 524 (529)
Q Consensus 474 GFssDEIR~~RK~~ptEaHKQRMALIRKtiK~--m~~~~~~~~~-~~~~~~~~~ 524 (529)
||+..+... .++- ..+|++.++. +.+-+-++.| -+.|+++|.
T Consensus 304 G~a~~~~~d--------~~~~-~~ai~~al~~~~Ll~~~d~~~Ak~~lv~i~g~ 348 (427)
T 3m89_A 304 GKARIAKFD--------LHSL-ENSIKRSLDEGFFSAEHQFETATMYGGFVLRP 348 (427)
T ss_dssp EEEEECSCS--------HHHH-HHHHHHHHHSSTTCSCCCGGGCCEEEEEEEEE
T ss_pred EEecccccc--------hhhH-HHHHHHHHhCCCcccccCcccccEEEEEEEeC
Confidence 665443221 1111 2478888853 2222223333 456777765
No 212
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=34.40 E-value=90 Score=25.18 Aligned_cols=71 Identities=8% Similarity=0.208 Sum_probs=36.0
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH---------HHHHHHH------------HHHHHHHhhhhcCCC
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI---------AEDFVES------------ITMFGCSLAKHRKSD 453 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI---------ADDFVDs------------Vvs~ACrLAKHRKSd 453 (529)
+.+++..|++..|..+++.+... ..+.++.+++..+ .++|+.- .+..|.++.-.-++.
T Consensus 20 D~d~~G~I~~~El~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G 98 (148)
T 2lmt_A 20 DKEGTGKIATRELGTLMRTLGQN-PTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDG 98 (148)
T ss_dssp HCSSCCEEEGGGHHHHHHHHTCC-CCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSSCSS
T ss_pred cCCCCCeECHHHHHHHHHhcCCC-chHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCCCcC
Confidence 34566677777777777776432 2233344444333 1234332 233444444444555
Q ss_pred CcchhhHHHHHhh
Q 009666 454 TLEAKDILVHLER 466 (529)
Q Consensus 454 TLEvKDVQLhLER 466 (529)
.|+..++...|.+
T Consensus 99 ~I~~~El~~~l~~ 111 (148)
T 2lmt_A 99 FISPAELRFVMIN 111 (148)
T ss_dssp EECHHHHHHHHHH
T ss_pred cCcHHHHHHHHHH
Confidence 5666666555543
No 213
>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A
Probab=34.40 E-value=7 Score=29.19 Aligned_cols=26 Identities=19% Similarity=0.547 Sum_probs=20.9
Q ss_pred hcCCCCcchhhHHHHHhhccCcccCC
Q 009666 449 HRKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 449 HRKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
.-|-|.|.+-++...||+.||+.||-
T Consensus 32 dlG~DSl~~~el~~~le~~fgi~i~~ 57 (78)
T 1l0i_A 32 DLGADSLDTVELVMALEEEFDTEIPD 57 (78)
T ss_dssp TSCCCHHHHHHHHHHHHHHHTCCCCH
T ss_pred hcCCCHHHHHHHHHHHHHHhCCCCCH
Confidence 34667778888999999999999863
No 214
>2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea}
Probab=34.37 E-value=3.6 Score=34.28 Aligned_cols=29 Identities=14% Similarity=0.363 Sum_probs=23.4
Q ss_pred hhhhcCC-CCcchhhHHHHHhhccCcccCC
Q 009666 446 LAKHRKS-DTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 446 LAKHRKS-dTLEvKDVQLhLERnWNI~IPG 474 (529)
|..--+. |.|++-+|.+.||++||+.||-
T Consensus 52 L~~dLGl~DSL~~veLi~~lE~~FgI~I~~ 81 (105)
T 2lki_A 52 LLGNIPELDSMAVVNVITALEEYFDFSVDD 81 (105)
T ss_dssp CBTTBTTCCHHHHHHHHHHHHHHHTSCCCG
T ss_pred hhhhcCcccHHHHHHHHHHHHHHhCCCcCH
Confidence 3334566 8888999999999999999863
No 215
>2dir_A Thump domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.308.1.3
Probab=34.24 E-value=5.2 Score=32.57 Aligned_cols=19 Identities=37% Similarity=0.467 Sum_probs=12.5
Q ss_pred heeeec-ceeeEeeeeeccC
Q 009666 509 LVIYKD-ACLSVHFTYHCAG 527 (529)
Q Consensus 509 ~~~~~~-~~~~~~~~~~~~~ 527 (529)
+-|.+| +|+||---|+-.|
T Consensus 79 VEI~~~~~~isv~~~y~~~~ 98 (98)
T 2dir_A 79 VEIIKAVCCLSVVKSGPSSG 98 (98)
T ss_dssp EEEETTEEEEEEEECCCTTC
T ss_pred EEEeCCEEEEEEccccccCc
Confidence 345566 7788877777544
No 216
>2iie_A Integration HOST factor; DNA kinking, bending, U-turn, intercalation, divalent, metal, recombination/DNA complex; HET: DNA; 2.41A {Escherichia coli} PDB: 2iif_A*
Probab=34.03 E-value=60 Score=30.12 Aligned_cols=20 Identities=25% Similarity=0.436 Sum_probs=14.2
Q ss_pred HHHhhccCcccCCCCccccc
Q 009666 462 VHLERNWNMTLPGFSGDEIK 481 (529)
Q Consensus 462 LhLERnWNI~IPGFssDEIR 481 (529)
-.|++...+.|+|||.=+++
T Consensus 80 ~~L~~G~~V~L~GfGtF~v~ 99 (204)
T 2iie_A 80 RALENGEQVKLSGFGNFDLR 99 (204)
T ss_dssp HHHHTTCEEEETTTEEEEEE
T ss_pred HHHhCCCeEEecCCEEEEEE
Confidence 34566667889999976554
No 217
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=34.01 E-value=95 Score=25.50 Aligned_cols=14 Identities=29% Similarity=0.396 Sum_probs=6.3
Q ss_pred cCCHHHHHHHHHhh
Q 009666 401 ILTKRSIQELVNQI 414 (529)
Q Consensus 401 ILtKrKLqELVrqI 414 (529)
.|++..|.++++.+
T Consensus 42 ~i~~~e~~~~l~~~ 55 (190)
T 2l2e_A 42 HLNKSEFQKIYKQF 55 (190)
T ss_dssp EECHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHh
Confidence 34444444444444
No 218
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=33.53 E-value=53 Score=29.33 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=25.6
Q ss_pred CCCHHHHHHHHHHH--H--HHHHHHHHHHHHhhhhcCCCCcchhhH
Q 009666 419 RLDPDVEDILVDIA--E--DFVESITMFGCSLAKHRKSDTLEAKDI 460 (529)
Q Consensus 419 sLDpDVEELLLeIA--D--DFVDsVvs~ACrLAKHRKSdTLEvKDV 460 (529)
.|++++.++|.... . .-+.++++.+|.+|+ .+.|+++||
T Consensus 208 ~~~~~a~~~L~~~~~~gn~reL~~~l~~~~~~~~---~~~i~~~~l 250 (265)
T 2bjv_A 208 GFTERARETLLNYRWPGNIRELKNVVERSVYRHG---TSDYPLDDI 250 (265)
T ss_dssp CBCHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHC---CSSSCBCCC
T ss_pred CcCHHHHHHHHhCCCCCCHHHHHHHHHHHHHhCC---CCcCcHHHc
Confidence 67888888877543 1 235677777777775 345677776
No 219
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=33.46 E-value=64 Score=25.08 Aligned_cols=61 Identities=8% Similarity=0.016 Sum_probs=29.1
Q ss_pred HHHHHHHHhhCCC--CCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 405 RSIQELVNQIDPS--ERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 405 rKLqELVrqIDPs--esLDpD-VEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
..|.++.+.+|.+ ..|+.+ ...+|..+...+-+..+...++.+-. +...|+..+..-.|.+
T Consensus 76 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~~ 139 (140)
T 1ggw_A 76 EEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHHC
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHhc
Confidence 4555555555432 244443 44444443322223333333344444 6667777777555543
No 220
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=33.33 E-value=58 Score=28.65 Aligned_cols=31 Identities=23% Similarity=0.259 Sum_probs=22.5
Q ss_pred HHHHHHhhhhcCCCCcchhhHHHHHhhccCcc
Q 009666 440 TMFGCSLAKHRKSDTLEAKDILVHLERNWNMT 471 (529)
Q Consensus 440 vs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~ 471 (529)
+..+.+..-..++..|+..++.-.|++ +|..
T Consensus 119 l~~~F~~~D~d~~G~I~~~El~~~l~~-~g~~ 149 (220)
T 3sjs_A 119 AYNLFVMNARARSGTLEPHEILPALQQ-LGFY 149 (220)
T ss_dssp HHHHHHHHCCSSTTEECHHHHHHHHHH-HTCC
T ss_pred HHHHHHHHCCCCCCCCcHHHHHHHHHH-hCCC
Confidence 455666666678888999999888875 3443
No 221
>2a7w_A PRA-PH, phosphoribosyl-ATP pyrophosphatase; structural genomics, PSI, protein structure initiative; 2.80A {Chromobacterium violaceum} SCOP: a.204.1.4
Probab=33.31 E-value=45 Score=29.33 Aligned_cols=59 Identities=25% Similarity=0.362 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCCCCcccccccCCCCCchHH
Q 009666 421 DPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGDEIKTFRKPLVCDIH 492 (529)
Q Consensus 421 DpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssDEIR~~RK~~ptEaH 492 (529)
++|-++++-|+||=| -...-|..+++ |++.||.-.|+|..++ .|-+| +..|+..+.+.|
T Consensus 54 ~~d~~el~~E~ADLl-----YHllVlL~~~g---v~l~dV~~eL~~R~~~----sg~~e-K~~R~~~~~~~~ 112 (116)
T 2a7w_A 54 DKDKLHLVREVADLW-----FHTMVLLTYHG---LRPEDVVMELHRREGI----SGLDE-KASRKPTALEHH 112 (116)
T ss_dssp TTCHHHHHHHHHHHH-----HHHHHHHHHTT---CCHHHHHHHHHHHCC-----------------------
T ss_pred hCCHHHHHHHHHHHH-----HHHHHHHHHcC---CCHHHHHHHHHHHhcc----cCcch-hccCCCchhhhc
Confidence 345556666666532 23333333344 6799999999999876 23344 434555555554
No 222
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=33.30 E-value=1.2e+02 Score=26.66 Aligned_cols=31 Identities=6% Similarity=0.122 Sum_probs=19.4
Q ss_pred HHHHHHHHhhhhcCCCCcchhhHHHHHhhcc
Q 009666 438 SITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (529)
Q Consensus 438 sVvs~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (529)
+.+..+.++.-..+...|+..++.-.|.+.|
T Consensus 125 ~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~ 155 (224)
T 1s1e_A 125 EKLRWTFNLYDINKDGYINKEEMMDIVKAIY 155 (224)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeECHHHHHHHHHHHH
Confidence 3445555555556666777777777766654
No 223
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=33.26 E-value=34 Score=32.75 Aligned_cols=45 Identities=13% Similarity=0.124 Sum_probs=25.8
Q ss_pred CHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009666 403 TKRSIQELVNQID--PSERLDPDVEDILVDIAEDFVESITMFGCSLA 447 (529)
Q Consensus 403 tKrKLqELVrqID--PsesLDpDVEELLLeIADDFVDsVvs~ACrLA 447 (529)
+.+...++++.+- ....+++++.+.|.+.++.|....+...|+.|
T Consensus 252 ~~~~r~~il~~~~~~~~~~l~~~~l~~la~~t~G~s~~dl~~l~~~a 298 (357)
T 3d8b_A 252 EASARKQIVINLMSKEQCCLSEEEIEQIVQQSDAFSGADMTQLCREA 298 (357)
T ss_dssp CHHHHHHHHHHHHHTSCBCCCHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhcCCCccHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 4444555554442 23458888888888877765544444444443
No 224
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=33.26 E-value=1.1e+02 Score=23.98 Aligned_cols=31 Identities=6% Similarity=-0.074 Sum_probs=19.9
Q ss_pred CcC-CccCCHHHHHHHHHhhCCCCCCCHH-HHHHH
Q 009666 396 EFG-NRILTKRSIQELVNQIDPSERLDPD-VEDIL 428 (529)
Q Consensus 396 e~~-nrILtKrKLqELVrqIDPsesLDpD-VEELL 428 (529)
.++ +..|++..|..+++.++- .++++ +++++
T Consensus 25 ~d~~~G~i~~~el~~~l~~~g~--~~~~~~~~~l~ 57 (146)
T 2qac_A 25 EKSSGGKISIDNASYNARKLGL--APSSIDEKKIK 57 (146)
T ss_dssp HHCBTTBEEHHHHHHHHHHTTC--CCCHHHHHHHH
T ss_pred ccCCCCcccHHHHHHHHHHhCC--CCCHHHHHHHH
Confidence 345 667888889888888743 34444 44444
No 225
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=33.05 E-value=35 Score=27.67 Aligned_cols=18 Identities=17% Similarity=0.106 Sum_probs=10.5
Q ss_pred CCcCCccCCHHHHHHHHH
Q 009666 395 DEFGNRILTKRSIQELVN 412 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVr 412 (529)
+.+++..|++..|.++++
T Consensus 24 D~d~dG~I~~~El~~~l~ 41 (111)
T 2kgr_A 24 DKTMSGHLTGPQARTILM 41 (111)
T ss_dssp SCSSCCEEEHHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHH
Confidence 344455566666666665
No 226
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=32.93 E-value=78 Score=32.36 Aligned_cols=73 Identities=14% Similarity=0.140 Sum_probs=51.5
Q ss_pred HHHHHHHHhhCCCCCCCHHHH-HH---------HHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCC
Q 009666 405 RSIQELVNQIDPSERLDPDVE-DI---------LVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 405 rKLqELVrqIDPsesLDpDVE-EL---------LLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
.-|++|.+.+|-...||.|.. |+ -.+.+|+.|-.++.....+-+.-+.-.||+.||+-.|.. .++.+-|
T Consensus 149 ~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~af~~~N~li~~~v~~it~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g 227 (394)
T 2vaw_A 149 EGIRALAESVDSLITIPNEKLLTILGKDASLLAAFAKADDVLAGAVRGISDIIKRPGMINVDFADVKTVMSE-MGMAMMG 227 (394)
T ss_dssp HHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHSBCSSCCCHHHHHHHHTT-TCCBEEE
T ss_pred HHHHHHHHhCCEEEEEecHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccHHHHHHhccC-CCceeEE
Confidence 346677777777666666642 21 245567777777776666777778888999999999976 6888888
Q ss_pred CCcc
Q 009666 475 FSGD 478 (529)
Q Consensus 475 FssD 478 (529)
++..
T Consensus 228 ~g~a 231 (394)
T 2vaw_A 228 TGCA 231 (394)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8643
No 227
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=32.83 E-value=1.3e+02 Score=25.10 Aligned_cols=34 Identities=9% Similarity=0.266 Sum_probs=21.4
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHH
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILV 429 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLL 429 (529)
+.+++..|++..|..+++.++-. ..+.++++++.
T Consensus 26 D~d~dG~I~~~El~~~l~~lg~~-~~~~~~~~~~~ 59 (153)
T 3i5g_B 26 DQDRDGFIGMEDLKDMFSSLGRV-PPDDELNAMLK 59 (153)
T ss_dssp CCSTTSCCCHHHHHHHHHHTTSC-CCHHHHHHHHH
T ss_pred CCCCCCeEcHHHHHHHHHHcCCC-ccHHHHHHHHH
Confidence 45667788888888888887532 23344444443
No 228
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=32.82 E-value=1.1e+02 Score=23.42 Aligned_cols=20 Identities=10% Similarity=0.079 Sum_probs=11.7
Q ss_pred CCcCCccCCHHHHHHHHHhh
Q 009666 395 DEFGNRILTKRSIQELVNQI 414 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqI 414 (529)
+.+++..|++..|.++++.+
T Consensus 19 D~d~dG~I~~~el~~~l~~~ 38 (92)
T 1fi6_A 19 QPDLNGFIPGSAAKEFFTKS 38 (92)
T ss_dssp CCSTTCEEEHHHHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHc
Confidence 34445556666666666655
No 229
>2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A
Probab=32.78 E-value=6.5 Score=31.89 Aligned_cols=25 Identities=24% Similarity=0.426 Sum_probs=21.9
Q ss_pred cCCCCcchhhHHHHHhhccCcccCC
Q 009666 450 RKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
-|-|.|++-++...||++||+.||.
T Consensus 33 LGlDSL~~veLi~~lE~~fgi~i~~ 57 (101)
T 2kw2_A 33 LGIDSLDFLDIAFAIDKAFGIKLPL 57 (101)
T ss_dssp CCCCHHHHHHHHHHHHHHTTCCCCH
T ss_pred cCCCHHHHHHHHHHHHHHHCCccCH
Confidence 4777888999999999999999864
No 230
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=32.76 E-value=50 Score=32.95 Aligned_cols=65 Identities=8% Similarity=0.124 Sum_probs=43.1
Q ss_pred CHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHH---HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhcc
Q 009666 403 TKRSIQELVNQID--PSERLDPDVEDILVDIAED---FVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (529)
Q Consensus 403 tKrKLqELVrqID--PsesLDpDVEELLLeIADD---FVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (529)
+.+.+.+++++.- .+..|++|+.+.|.+.++. -++++++.++.+|...+. .|+..||+-+|++..
T Consensus 264 ~~e~r~~iL~~~~~~~~~~i~~e~l~~la~~~~gn~R~l~~~L~~~~~~a~~~~~-~It~~~~~~~l~~~~ 333 (440)
T 2z4s_A 264 DEETRKSIARKMLEIEHGELPEEVLNFVAENVDDNLRRLRGAIIKLLVYKETTGK-EVDLKEAILLLKDFI 333 (440)
T ss_dssp CHHHHHHHHHHHHHHHTCCCCTTHHHHHHHHCCSCHHHHHHHHHHHHHHHHHSSS-CCCHHHHHHHTSTTT
T ss_pred CHHHHHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHh
Confidence 3444444444431 2457899998888876642 345677888888876664 488888888877654
No 231
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=32.75 E-value=1.4e+02 Score=22.00 Aligned_cols=17 Identities=24% Similarity=0.600 Sum_probs=10.9
Q ss_pred cCCc-cCCHHHHHHHHHh
Q 009666 397 FGNR-ILTKRSIQELVNQ 413 (529)
Q Consensus 397 ~~nr-ILtKrKLqELVrq 413 (529)
+++. .|++..|..+++.
T Consensus 22 d~~G~~I~~~el~~~l~~ 39 (93)
T 1k2h_A 22 EGDKYKLSKKELKDLLQT 39 (93)
T ss_dssp SSCCSSCCHHHHHHHHHH
T ss_pred CCCcCccCHHHHHHHHHH
Confidence 3344 6777777777765
No 232
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=32.44 E-value=1.7e+02 Score=23.87 Aligned_cols=42 Identities=12% Similarity=0.263 Sum_probs=27.4
Q ss_pred ccCCHHHHHHHHHh-hCC--CCCCCHH-HHHHHHHH---------HHHHHHHHHH
Q 009666 400 RILTKRSIQELVNQ-IDP--SERLDPD-VEDILVDI---------AEDFVESITM 441 (529)
Q Consensus 400 rILtKrKLqELVrq-IDP--sesLDpD-VEELLLeI---------ADDFVDsVvs 441 (529)
..|++..|..+++. +.. +..++++ |+++|.++ -+|||.-+..
T Consensus 27 G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~ 81 (101)
T 3nso_A 27 YKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 81 (101)
T ss_dssp TEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred CEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 68999999999985 542 3566665 55555444 2367765443
No 233
>2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus}
Probab=32.32 E-value=15 Score=27.86 Aligned_cols=24 Identities=17% Similarity=0.166 Sum_probs=20.7
Q ss_pred CCCCcchhhHHHHHhhccCcccCC
Q 009666 451 KSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 451 KSdTLEvKDVQLhLERnWNI~IPG 474 (529)
|-|.|.+-++...||+.||+.|+-
T Consensus 41 G~DSL~~~~l~~~l~~~~g~~l~~ 64 (89)
T 2kr5_A 41 GIDSLSSMVIGSRFREDLGLDLGP 64 (89)
T ss_dssp TCCHHHHHHHHHHHHHTTCCCCCS
T ss_pred CccHHHHHHHHHHHHHHHCCCCCc
Confidence 677788888999999999999875
No 234
>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A
Probab=32.00 E-value=19 Score=26.87 Aligned_cols=24 Identities=21% Similarity=0.113 Sum_probs=20.8
Q ss_pred cCCCCcchhhHHHHHhhccCcccC
Q 009666 450 RKSDTLEAKDILVHLERNWNMTLP 473 (529)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IP 473 (529)
-|-|.|.+-++...||+.||+.||
T Consensus 43 lG~DSl~~~~l~~~l~~~~~~~i~ 66 (88)
T 2afd_A 43 YDLNSSKALILLGRLEKWLGKELN 66 (88)
T ss_dssp TTCCSTHHHHHHHHHHHHTTSCCC
T ss_pred cCccHHHHHHHHHHHHHHHCCCcC
Confidence 367788889999999999999876
No 235
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=31.98 E-value=53 Score=32.33 Aligned_cols=73 Identities=14% Similarity=0.140 Sum_probs=51.2
Q ss_pred HHHHHHHHhhCCCCCCCHHHH-HH---------HHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCC
Q 009666 405 RSIQELVNQIDPSERLDPDVE-DI---------LVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 405 rKLqELVrqIDPsesLDpDVE-EL---------LLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
.-|++|.+.+|-...||.|.. |+ -.+.+|+-|-.++.....+-+.-+.-.+|+.||+-.|.. -++.+.|
T Consensus 149 ~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~~af~~~n~~l~~~v~~it~~ir~pG~iNvD~~dv~t~l~~-~g~~~~g 227 (320)
T 1ofu_A 149 EGIRALAESVDSLITIPNEKLLTILGKDASLLAAFAKADDVLAGAVRGISDIIKRPGMINVDFADVKTVMSE-MGMAMMG 227 (320)
T ss_dssp HHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHSCSSSSCCHHHHHHHHTT-CEEEEEE
T ss_pred HHHHHHHHhCCEEEEEecHHhhhhhhcCCCHHHHHHHHHHHHHHHhcccHhhcccCCceeecHHHHHHhccC-CCeeEEE
Confidence 346677777777666666642 11 145566667777766666777778888999999999987 5788888
Q ss_pred CCcc
Q 009666 475 FSGD 478 (529)
Q Consensus 475 FssD 478 (529)
++..
T Consensus 228 ~g~a 231 (320)
T 1ofu_A 228 TGCA 231 (320)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7643
No 236
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=31.97 E-value=1e+02 Score=22.77 Aligned_cols=19 Identities=26% Similarity=0.403 Sum_probs=11.4
Q ss_pred cCCCCcchhhHHHHHhhcc
Q 009666 450 RKSDTLEAKDILVHLERNW 468 (529)
Q Consensus 450 RKSdTLEvKDVQLhLERnW 468 (529)
.+...|+..+..-.+.+.+
T Consensus 68 ~~dg~i~~~eF~~~~~~~~ 86 (90)
T 1avs_A 68 DGSGTIDFEEFLVMMVRQM 86 (90)
T ss_dssp TCCSSEEHHHHHHHHHHHH
T ss_pred CCCCeEeHHHHHHHHHHHh
Confidence 4555677777766555543
No 237
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=31.52 E-value=65 Score=29.96 Aligned_cols=63 Identities=13% Similarity=0.360 Sum_probs=40.6
Q ss_pred cCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc-chhhHHHHHhhccCcccCCCC
Q 009666 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTL-EAKDILVHLERNWNMTLPGFS 476 (529)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTL-EvKDVQLhLERnWNI~IPGFs 476 (529)
|-+|+-|++|++-|+ ...+.+|.+-+|+|..+|-+.. ++...+ .+.|+---|++. |+.+|.+.
T Consensus 84 ias~~fl~~l~~l~~--~~~~~~Vk~kil~li~~W~~~f----------~~~~~l~~i~~~Y~~Lk~~-G~~FP~~~ 147 (226)
T 3zyq_A 84 VANKQTMEELKDLLK--RQVEVNVRNKILYLIQAWAHAF----------RNEPKYKVVQDTYQIMKVE-GHVFPEFK 147 (226)
T ss_dssp HSSHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHT----------TTCGGGHHHHHHHHHHHHH-TCCCCCCC
T ss_pred hccHHHHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHh----------CCCcchHHHHHHHHHHHhc-CCCcccch
Confidence 456777777776664 3567888888888887776532 111111 267776667665 88888764
No 238
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=31.41 E-value=92 Score=24.72 Aligned_cols=20 Identities=0% Similarity=-0.052 Sum_probs=13.4
Q ss_pred CCcCCccCCHHHHHHHHHhh
Q 009666 395 DEFGNRILTKRSIQELVNQI 414 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqI 414 (529)
+.++...|+...|.++++..
T Consensus 21 D~d~dG~Is~~el~~~l~~~ 40 (99)
T 1qjt_A 21 EAGNTGRVLALDAAAFLKKS 40 (99)
T ss_dssp CCTTSSCCCSHHHHHHHHTS
T ss_pred CCCCCCcCCHHHHHHHHHHc
Confidence 34555667777777777765
No 239
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=31.33 E-value=1.8e+02 Score=22.34 Aligned_cols=69 Identities=6% Similarity=0.082 Sum_probs=36.4
Q ss_pred CcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH----------HHHHHHH------------HHHHHHhhhhcCCC
Q 009666 396 EFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIA----------EDFVESI------------TMFGCSLAKHRKSD 453 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIA----------DDFVDsV------------vs~ACrLAKHRKSd 453 (529)
.+++..|++..|.++++.+.. .++++..+.|.+.+ ++|+.-+ +..+.++.-..+..
T Consensus 22 ~~~~G~i~~~e~~~~l~~~~~--~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G 99 (147)
T 4ds7_A 22 KDNSGSISASELATVMRSLGL--SPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDG 99 (147)
T ss_dssp TTCSSEEEHHHHHHHHHHTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHHHHHCTTCSS
T ss_pred CCCCCCcCHHHHHHHHHHhCC--CCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHHHHhCCCCCC
Confidence 445556777777777776532 23333323333322 3444433 33344444445566
Q ss_pred CcchhhHHHHHhh
Q 009666 454 TLEAKDILVHLER 466 (529)
Q Consensus 454 TLEvKDVQLhLER 466 (529)
.|+..++.-.|+.
T Consensus 100 ~i~~~e~~~~l~~ 112 (147)
T 4ds7_A 100 LISAAELKHVLTS 112 (147)
T ss_dssp EECHHHHHHHHHH
T ss_pred eECHHHHHHHHHH
Confidence 7777777777763
No 240
>1jr3_D DNA polymerase III, delta subunit; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1jqj_C* 1xxh_A* 1xxi_A* 3glf_A* 3glg_A* 3glh_A* 3gli_A*
Probab=31.29 E-value=29 Score=32.48 Aligned_cols=63 Identities=11% Similarity=-0.010 Sum_probs=39.3
Q ss_pred CCHHHHHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHH---HHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 402 LTKRSIQELVNQI--DPSERLDPDVEDILVDIAEDFVE---SITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 402 LtKrKLqELVrqI--DPsesLDpDVEELLLeIADDFVD---sVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
++.+.|.+.|+++ ..+..||+++.++|.++++.=+. +.++..+.++ +.++|+.+||.-.+...
T Consensus 142 l~~~~l~~~l~~~~~~~g~~i~~~a~~~l~~~~~gdl~~~~~elekl~l~~---~~~~It~e~V~~~~~~~ 209 (343)
T 1jr3_D 142 PEQAQLPRWVAARAKQLNLELDDAANQVLCYCYEGNLLALAQALERLSLLW---PDGKLTLPRVEQAVNDA 209 (343)
T ss_dssp CCTTHHHHHHHHHHHHTTCEECHHHHHHHHHSSTTCHHHHHHHHHHHHHHC---TTCEECHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhchHHHHHHHHHHHHHHhc---CCCCCCHHHHHHHHhhh
Confidence 3556666666665 34567999999999998763222 2333333333 34478888886665554
No 241
>1msk_A Cobalamin-dependent methionine synthase; methyltransferase, transferase, methionine biosynthesis, vitamin B12; HET: SAM; 1.80A {Escherichia coli K12} SCOP: d.173.1.1
Probab=31.23 E-value=95 Score=31.31 Aligned_cols=68 Identities=12% Similarity=0.232 Sum_probs=40.8
Q ss_pred HHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----CCCCcchhhHHHHHhhccCccc-CCCCc
Q 009666 406 SIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHR-----KSDTLEAKDILVHLERNWNMTL-PGFSG 477 (529)
Q Consensus 406 KLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHR-----KSdTLEvKDVQLhLERnWNI~I-PGFss 477 (529)
.+.+++++. ....|+--.=+|--|||.++|.+++..+..-+.. ..+.++.+|+ +-|+.-|++. |||+.
T Consensus 172 gi~~~~~~~--~~~~ddy~aiml~alAdrlAEA~AE~~h~~VR~e~wGya~~e~l~~~~l--~~~~Y~GiR~sPGYpa 245 (331)
T 1msk_A 172 EEDALADAF--EAQHDDYNKIMVKALADRLAEAFAEYLHERVRKVYWGYAPNENLSNEEL--IRENYQGIRPAPGYPA 245 (331)
T ss_dssp THHHHHHHH--HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSCTTCCCCHHHH--HTTCSSCBCCCTTSTT
T ss_pred cHHHHHHHH--HhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccCHHHH--HhhccCccCCCCCCCC
Confidence 356666665 1122333333345678888888888887766653 2345777775 3455456775 88865
No 242
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=31.23 E-value=48 Score=29.12 Aligned_cols=24 Identities=17% Similarity=0.055 Sum_probs=12.4
Q ss_pred HHHhhhhcCCCCcchhhHHHHHhh
Q 009666 443 GCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 443 ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
+.++.-..+...|+..++.-+|..
T Consensus 138 ~F~~~D~d~dG~Is~~El~~~l~~ 161 (226)
T 2lvv_A 138 MFDTMDKDGSLLLELQEFKEALPK 161 (226)
T ss_dssp HHHHHSCSSCCEECHHHHHHHHHH
T ss_pred HHHHHcCCCCCeEcHHHHHHHHHH
Confidence 333333345555666666655554
No 243
>3fes_A ATP-dependent CLP endopeptidase; alpha-helical bundles, structural genomics, PSI-2, protein S initiative; HET: PG4 EPE; 1.82A {Clostridium difficile}
Probab=31.23 E-value=40 Score=28.42 Aligned_cols=32 Identities=16% Similarity=0.256 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 436 VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 436 VDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+..|++.|..+|+.++.+.|++.+|.+.|-++
T Consensus 86 ~~~vl~~A~~~A~~~~~~~v~~eHlLlAll~~ 117 (145)
T 3fes_A 86 SKQILELSGMFANKLKTNYIGTEHILLAIIQE 117 (145)
T ss_dssp HHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcccHHHHHHHHHhC
Confidence 56788999999999999999999999988665
No 244
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=31.18 E-value=1.8e+02 Score=22.35 Aligned_cols=21 Identities=5% Similarity=0.140 Sum_probs=15.3
Q ss_pred CCcCCccCCHHHHHHHHHhhC
Q 009666 395 DEFGNRILTKRSIQELVNQID 415 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqID 415 (529)
+.+++..|++..|..+++.++
T Consensus 15 D~d~~G~i~~~e~~~~l~~~~ 35 (145)
T 2bl0_B 15 DKDNDGKVSIEELGSALRSLG 35 (145)
T ss_dssp CTTCSSCEEGGGHHHHHHHTT
T ss_pred CCCCcCccCHHHHHHHHHHhC
Confidence 445666788888888888774
No 245
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=31.02 E-value=1.2e+02 Score=24.51 Aligned_cols=19 Identities=11% Similarity=0.200 Sum_probs=11.0
Q ss_pred CcCCccCCHHHHHHHHHhh
Q 009666 396 EFGNRILTKRSIQELVNQI 414 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqI 414 (529)
.+++..|++..|..+++.+
T Consensus 51 ~d~~G~I~~~el~~~l~~~ 69 (135)
T 3h4s_E 51 DPERHLITAESLRRNSGIL 69 (135)
T ss_dssp BTTTTBBCHHHHHHHGGGG
T ss_pred CCCCCcCCHHHHHHHHHHh
Confidence 3445556666666666655
No 246
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=30.78 E-value=32 Score=24.26 Aligned_cols=15 Identities=7% Similarity=0.333 Sum_probs=7.3
Q ss_pred ccCCHHHHHHHHHhh
Q 009666 400 RILTKRSIQELVNQI 414 (529)
Q Consensus 400 rILtKrKLqELVrqI 414 (529)
..|++..|..+++.+
T Consensus 22 G~i~~~el~~~l~~~ 36 (76)
T 1qx2_A 22 NQISKEELKLVMQTL 36 (76)
T ss_dssp TSEEHHHHHHHHHHH
T ss_pred CeECHHHHHHHHHHh
Confidence 344555555555444
No 247
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=30.76 E-value=54 Score=31.31 Aligned_cols=39 Identities=8% Similarity=0.132 Sum_probs=26.4
Q ss_pred HHHHHHHHHhhCCCCCCCH--------HHHHHHH------HHHHHHHHHHHHH
Q 009666 404 KRSIQELVNQIDPSERLDP--------DVEDILV------DIAEDFVESITMF 442 (529)
Q Consensus 404 KrKLqELVrqIDPsesLDp--------DVEELLL------eIADDFVDsVvs~ 442 (529)
.++|...++++-....||+ |++++|+ ++|++|+++|-+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dv~~~~~~~~~~~~~~~ 56 (297)
T 1j8m_F 4 LDNLRDTVRKFLTGSSSYDKAVEDFIKELQKSLISADVNVKLVFSLTNKIKER 56 (297)
T ss_dssp HHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 3567788888877778887 4555665 4666777766443
No 248
>2qup_A BH1478 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Bacillus halodurans}
Probab=30.66 E-value=37 Score=30.25 Aligned_cols=49 Identities=20% Similarity=0.291 Sum_probs=26.6
Q ss_pred HHHHHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Q 009666 404 KRSIQELVNQIDPS-----ERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKS 452 (529)
Q Consensus 404 KrKLqELVrqIDPs-----esLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKS 452 (529)
...|.+|+.+||.. ...+-+--..-.++.-+|++.|+..+.++-+.++-
T Consensus 40 ~e~L~~ll~~I~~~G~rL~~~~t~~~l~~YK~lVk~Fl~~~v~~~~~l~~~~~~ 93 (145)
T 2qup_A 40 YERLQALMSKIDDQGKLLSETRTIEELRKYKELVKEFVGDAVELGLRLEERRGF 93 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHheehhhccc
Confidence 35677777777531 12222223334567777777777777776665554
No 249
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=30.61 E-value=85 Score=24.34 Aligned_cols=16 Identities=19% Similarity=0.347 Sum_probs=8.6
Q ss_pred HhhhhcCCCCcchhhH
Q 009666 445 SLAKHRKSDTLEAKDI 460 (529)
Q Consensus 445 rLAKHRKSdTLEvKDV 460 (529)
+.+-..+...|+..+.
T Consensus 51 ~~~D~d~dG~i~~~EF 66 (95)
T 1c07_A 51 SLCDTKDCGKLSKDQF 66 (95)
T ss_dssp HHHCTTCSSSEETTTH
T ss_pred HHHCCCCCCcCCHHHH
Confidence 3444455556666655
No 250
>2jer_A Agmatine deiminase; hydrolase, tetramer, AGDI, 5- fold pseudosymmetric structure, agmatine degradation pathway, covalent amidino adduct; HET: AGT; 1.65A {Enterococcus faecalis} SCOP: d.126.1.6
Probab=30.58 E-value=20 Score=36.76 Aligned_cols=68 Identities=21% Similarity=0.130 Sum_probs=49.6
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhhccC----cccC-CCCccccc----c------------cCCCCCchHHHHHHH
Q 009666 439 ITMFGCSLAKHRKSDTLEAKDILVHLERNWN----MTLP-GFSGDEIK----T------------FRKPLVCDIHKERLA 497 (529)
Q Consensus 439 Vvs~ACrLAKHRKSdTLEvKDVQLhLERnWN----I~IP-GFssDEIR----~------------~RK~~ptEaHKQRMA 497 (529)
+++..|.|.++|+-. +.-.+|.-.|++.+| |||| |+..||-. . +.-....+.|-+++.
T Consensus 170 ltTe~clLn~nRNP~-lsk~eiE~~Lk~~LGv~kvIWL~~Gl~~DdTdgHID~~arFv~p~~vl~~~~~d~~dp~y~~~~ 248 (389)
T 2jer_A 170 LTTEMCLLSEGRNPQ-LSKEAIEQKLCDYLNVEKVLWLGDGIDPEETNGHVDDVACFIAPGEVACIYTEDQNSPFYEAAQ 248 (389)
T ss_dssp EEEHHHHTSTTTCTT-SCHHHHHHHHHHHHTCSEEEEECCCSCTTTTSSCGGGTEEEEETTEEEEECCCCTTSTTHHHHH
T ss_pred EEEeeeecCCCCCCC-cCHHHHHHHHHHHcCCCEEEEcCCcCCCCCCCCchhheeEEeCCCEEEEEecCCCCCccHHHHH
Confidence 567899999999977 678899999999888 6678 76655421 1 111124455778999
Q ss_pred HHHHHHhhhh
Q 009666 498 AVSFTLDIMC 507 (529)
Q Consensus 498 LIRKtiK~m~ 507 (529)
.+.+.|++++
T Consensus 249 ~~~~~L~~~~ 258 (389)
T 2jer_A 249 DAYQRLLKMT 258 (389)
T ss_dssp HHHHHHHTCB
T ss_pred HHHHHHHhhh
Confidence 9999998864
No 251
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=30.52 E-value=1.3e+02 Score=28.72 Aligned_cols=74 Identities=18% Similarity=0.159 Sum_probs=47.0
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHH-HHHHH---------HHHHHHHH-----HHHHHHhhhhcCCCCcchhh
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVED-ILVDI---------AEDFVESI-----TMFGCSLAKHRKSDTLEAKD 459 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEE-LLLeI---------ADDFVDsV-----vs~ACrLAKHRKSdTLEvKD 459 (529)
+.+++..|++..|..++ ++. ..-+.++++ ++..+ .++|+.-+ +..+.++.-.-+...|+..+
T Consensus 198 D~d~dG~Is~~El~~~l--~g~-~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~l~~~F~~~D~d~dG~Is~~E 274 (323)
T 1ij5_A 198 DTNSNGTLSRKEFREHF--VRL-GFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEE 274 (323)
T ss_dssp CTTCCSEECHHHHHHHH--HHT-TCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSCSSEEHHH
T ss_pred CCCCCCcCcHHHHHHHH--cCC-CCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 44667788988888887 321 122455666 55544 45677665 44555555556777899999
Q ss_pred HHHHHhhccCcc
Q 009666 460 ILVHLERNWNMT 471 (529)
Q Consensus 460 VQLhLERnWNI~ 471 (529)
+.-+|.+.+|..
T Consensus 275 l~~~l~~~~g~~ 286 (323)
T 1ij5_A 275 VQKVLEDAHIPE 286 (323)
T ss_dssp HHHHHHHTTCCG
T ss_pred HHHHHHHHcCCC
Confidence 988884555543
No 252
>1xkn_A Putative peptidyl-arginine deiminase; alpha-beta protein, NESG, structural genomics, protein struc initiative, PSI; 1.60A {Chlorobium tepidum} SCOP: d.126.1.6
Probab=30.48 E-value=19 Score=36.41 Aligned_cols=68 Identities=24% Similarity=0.261 Sum_probs=49.6
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhhccCc----ccC-CCCccccc----c------------cCCCCCchHHHHHHH
Q 009666 439 ITMFGCSLAKHRKSDTLEAKDILVHLERNWNM----TLP-GFSGDEIK----T------------FRKPLVCDIHKERLA 497 (529)
Q Consensus 439 Vvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI----~IP-GFssDEIR----~------------~RK~~ptEaHKQRMA 497 (529)
+++..|.|-++|+-. |.-.+|.-.|++.+|+ ||| |+..|+-. . +....+.+.|-+++.
T Consensus 169 ltT~~clLn~nRNp~-ls~~~ie~~L~~~LG~~~viwL~~Gl~~DdtdgHiD~~arfv~p~~vl~~~~~d~~d~~y~~~~ 247 (355)
T 1xkn_A 169 LTTTACLLNPNRNPS-LGKAEIEAQLRRYLGIEKVLWLGDGIAGDDTDGHVDDMARFVNENTVVIAVEEDPEDENYKPLR 247 (355)
T ss_dssp EEEHHHHTCTTTCTT-CCHHHHHHHHHHHHCCSEEEEECCCCTTCTTSSCGGGTEEEEETTEEEEECCCCTTSTTHHHHH
T ss_pred EEEeeeecCCCCCCC-CCHHHHHHHHHHHcCCcEEEEeCCccCCCCCCcchhheeEeeCCCEEEEEcCCCCCCccHHHHH
Confidence 568899999999986 7888999999998884 678 55444311 1 122235566789999
Q ss_pred HHHHHHhhhh
Q 009666 498 AVSFTLDIMC 507 (529)
Q Consensus 498 LIRKtiK~m~ 507 (529)
.+.+.|++++
T Consensus 248 ~~~~~L~~~~ 257 (355)
T 1xkn_A 248 ENYELLKTMT 257 (355)
T ss_dssp HHHHHHTTCB
T ss_pred HHHHHHHhhh
Confidence 9999999764
No 253
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=30.34 E-value=1.2e+02 Score=23.88 Aligned_cols=70 Identities=10% Similarity=0.123 Sum_probs=0.0
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH------HHHH------------HHHHHHHHHhhhhcCCCCcc
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIA------EDFV------------ESITMFGCSLAKHRKSDTLE 456 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIA------DDFV------------DsVvs~ACrLAKHRKSdTLE 456 (529)
+.+++..|++..|..+++.++. .++++..+.|+... ++|+ +..+..++++.-..+...|+
T Consensus 26 D~d~~G~i~~~el~~~l~~~g~--~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~ 103 (153)
T 2ovk_B 26 DQDRDGFIGMEDLKDMFSSLGR--VPPDDELNAMLKECPGQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIP 103 (153)
T ss_dssp CCSTTTCCCHHHHHHHTTTTTS--CCCHHHHHHHHHHSSSCCCSHHHHHTTTTTTTTCCCTTHHHHHHHTTCSSCSSCCC
T ss_pred CCCCCCeECHHHHHHHHHHhCC--CCCHHHHHHHHHHcCCCCCHHHHHHHHHHHhccCChHHHHHHHHHHHCCCCCCeEc
Q ss_pred hhhHHHHHhh
Q 009666 457 AKDILVHLER 466 (529)
Q Consensus 457 vKDVQLhLER 466 (529)
..++.-.|.+
T Consensus 104 ~~el~~~l~~ 113 (153)
T 2ovk_B 104 EDYLKDLLEN 113 (153)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
No 254
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=30.29 E-value=33 Score=32.41 Aligned_cols=20 Identities=5% Similarity=0.037 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHhhhhcCCC
Q 009666 434 DFVESITMFGCSLAKHRKSD 453 (529)
Q Consensus 434 DFVDsVvs~ACrLAKHRKSd 453 (529)
+.+..++...+.+|+..|.+
T Consensus 226 ~l~~~~~~E~~~va~a~G~~ 245 (318)
T 3hwr_A 226 AVMRDVMEECFAVARAEGVK 245 (318)
T ss_dssp HHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHcCCC
Confidence 34445555555666666554
No 255
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=30.26 E-value=1.1e+02 Score=29.31 Aligned_cols=48 Identities=21% Similarity=0.272 Sum_probs=40.6
Q ss_pred HHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 009666 406 SIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSD 453 (529)
Q Consensus 406 KLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSd 453 (529)
.|+.|+..-++...++.|+-+++.+=-++|...|-....+.|+....+
T Consensus 165 sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~~~~~ 212 (253)
T 3e46_A 165 SLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSS 212 (253)
T ss_dssp HHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCSCCC
T ss_pred HHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhcccccCc
Confidence 456777777888899999999999999999999999999999865543
No 256
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=30.07 E-value=36 Score=34.46 Aligned_cols=62 Identities=18% Similarity=0.242 Sum_probs=42.7
Q ss_pred CCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 402 LTKRSIQELVNQID--PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 402 LtKrKLqELVrqID--PsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
++...+.++++++- .+..+|+++.+.|.+.++-=+..++...+.+|. +.+.|+.+||.-.++
T Consensus 209 ~~~~~~~~~L~~i~~~~~~~i~~~~l~~la~~s~GdiR~~i~~L~~~~~--~~~~It~~~v~~~~~ 272 (516)
T 1sxj_A 209 PDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVINLLSTIST--TTKTINHENINEISK 272 (516)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCCTTHHHHHHHHTTTCHHHHHHHHTHHHH--HSSCCCTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHcCCcHHHHHHHHHHHHh--cCCCCchHHHHHHHH
Confidence 46667777776653 245699999999998887666777777666665 334577777755544
No 257
>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*
Probab=30.04 E-value=8.2 Score=28.87 Aligned_cols=27 Identities=19% Similarity=0.402 Sum_probs=21.6
Q ss_pred hcCCCCcchhhHHHHHhhccCcccCCC
Q 009666 449 HRKSDTLEAKDILVHLERNWNMTLPGF 475 (529)
Q Consensus 449 HRKSdTLEvKDVQLhLERnWNI~IPGF 475 (529)
.-|-+.|.+-++...||+.||+.||-.
T Consensus 36 dlG~DSl~~~~l~~~le~~fgi~i~~~ 62 (82)
T 2cnr_A 36 DLDVDSLSMVEVVVAAEERFDVKIPDD 62 (82)
T ss_dssp TSCCCHHHHHHHHHHHHGGGTBCCCGG
T ss_pred ccCCChHHHHHHHHHHHHHhCCCCCHH
Confidence 346677778889999999999998743
No 258
>2kkp_A Phage integrase; SAM-like domain, alpha-helical bundle, structural genomics, PSI-2, protein structure initiative; NMR {Moorella thermoacetica atcc 39073}
Probab=29.81 E-value=39 Score=25.68 Aligned_cols=11 Identities=0% Similarity=0.129 Sum_probs=8.0
Q ss_pred HHHHHHHHHHH
Q 009666 428 LVDIAEDFVES 438 (529)
Q Consensus 428 LLeIADDFVDs 438 (529)
|.+++|+|++.
T Consensus 9 ~~~~~~~~l~~ 19 (117)
T 2kkp_A 9 VEQWLNRWLTD 19 (117)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 56777888775
No 259
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=29.65 E-value=1e+02 Score=26.41 Aligned_cols=20 Identities=5% Similarity=0.277 Sum_probs=13.4
Q ss_pred CCcCCccCCHHHHHHHHHhh
Q 009666 395 DEFGNRILTKRSIQELVNQI 414 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqI 414 (529)
+.+++..|++..|..+++.+
T Consensus 113 D~d~~G~i~~~el~~~l~~~ 132 (263)
T 2f33_A 113 DTDHSGFIETEELKNFLKDL 132 (263)
T ss_dssp STTTCSSBCHHHHHHHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHH
Confidence 44566677777777777665
No 260
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=29.63 E-value=87 Score=31.91 Aligned_cols=73 Identities=14% Similarity=0.038 Sum_probs=53.3
Q ss_pred HHHHHHHHHhhCCCCCCCHHH-----------HHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCccc
Q 009666 404 KRSIQELVNQIDPSERLDPDV-----------EDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTL 472 (529)
Q Consensus 404 KrKLqELVrqIDPsesLDpDV-----------EELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~I 472 (529)
..-|++|++.+|-...||.|. ++ -.+.+|+.|-.++.....+-+.-+.-.||+.||+-.|.. .++.+
T Consensus 148 ~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~-af~~~N~li~~~vs~it~~ir~pG~iNvD~~dv~t~L~~-~g~a~ 225 (382)
T 1rq2_A 148 ENGIAALRESCDTLIVIPNDRLLQMGDAAVSLMD-AFRSADEVLLNGVQGITDLITTPGLINVDFADVKGIMSG-AGTAL 225 (382)
T ss_dssp HHHHHHHHHHCSEEEEEEHHHHTTSSCTTCCHHH-HHHHHHHHHHHHHHHHHHHHHSBCSSCCCHHHHHHHHTT-CEEEE
T ss_pred HHHHHHHHHhCCEEEEEechhHHHHhcCCCCHHH-HHHHHHHHHHHHHHHHHHHHccCCceeccHHHHHHhccC-CCeeE
Confidence 344777888887655444442 23 367778888888877777777788888999999999986 67888
Q ss_pred CCCCcc
Q 009666 473 PGFSGD 478 (529)
Q Consensus 473 PGFssD 478 (529)
.|++..
T Consensus 226 ~g~g~a 231 (382)
T 1rq2_A 226 MGIGSA 231 (382)
T ss_dssp EEEEEE
T ss_pred EEeeec
Confidence 887653
No 261
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=29.61 E-value=91 Score=24.33 Aligned_cols=21 Identities=24% Similarity=0.431 Sum_probs=15.2
Q ss_pred CCcCCccCCHHHHHHHHHhhC
Q 009666 395 DEFGNRILTKRSIQELVNQID 415 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqID 415 (529)
+.+++..|++..|.++++.++
T Consensus 14 D~d~~G~i~~~el~~~l~~~g 34 (148)
T 1m45_A 14 DKKGQGAIAKDSLGDYLRAIG 34 (148)
T ss_dssp CTTCCSEEEGGGHHHHHHHTT
T ss_pred CCCCCCCCCHHHHHHHHHHhC
Confidence 445666788888888888774
No 262
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=29.52 E-value=38 Score=27.18 Aligned_cols=64 Identities=8% Similarity=0.073 Sum_probs=36.3
Q ss_pred HHHHHHHHHhhCCC--CCCCHH-HHHHHHHHHH---------HHHHHHHH----HHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 404 KRSIQELVNQIDPS--ERLDPD-VEDILVDIAE---------DFVESITM----FGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 404 KrKLqELVrqIDPs--esLDpD-VEELLLeIAD---------DFVDsVvs----~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+++|.++.+.+|.+ ..|+.+ ...+|..+.. ++|..++. ..++.+- +...|+..+..-.+.+.
T Consensus 5 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~~~ 82 (174)
T 1q80_A 5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMKEM 82 (174)
T ss_dssp HHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHHHH
Confidence 56788888888754 466654 5555555541 22333322 2222333 66678888876666554
Q ss_pred cC
Q 009666 468 WN 469 (529)
Q Consensus 468 WN 469 (529)
.+
T Consensus 83 ~~ 84 (174)
T 1q80_A 83 VK 84 (174)
T ss_dssp TT
T ss_pred cC
Confidence 43
No 263
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=29.31 E-value=1e+02 Score=22.28 Aligned_cols=19 Identities=11% Similarity=0.216 Sum_probs=11.6
Q ss_pred CcCCccCCHHHHHHHHHhh
Q 009666 396 EFGNRILTKRSIQELVNQI 414 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqI 414 (529)
.+++..|++..|..+++.+
T Consensus 25 ~d~~G~i~~~el~~~l~~~ 43 (85)
T 2ktg_A 25 KDNDNKLTAEELGTVMRAL 43 (85)
T ss_dssp TTCCSEEEHHHHHHHHHTT
T ss_pred CCCCCcCcHHHHHHHHHHh
Confidence 3445566666666666665
No 264
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=28.98 E-value=79 Score=23.96 Aligned_cols=13 Identities=0% Similarity=0.051 Sum_probs=6.8
Q ss_pred hcCCCCcchhhHH
Q 009666 449 HRKSDTLEAKDIL 461 (529)
Q Consensus 449 HRKSdTLEvKDVQ 461 (529)
..+...|+..+..
T Consensus 92 ~~~dg~i~~~eF~ 104 (109)
T 1bu3_A 92 SDGDGAIGVDEWA 104 (109)
T ss_dssp TTCSSEECHHHHH
T ss_pred CCCCCcEeHHHHH
Confidence 3444556666553
No 265
>1c52_A Cytochrome-C552; electron transport protein, MAD, thermostability; HET: HEM; 1.28A {Thermus thermophilus} SCOP: a.3.1.1 PDB: 1qyz_A* 1r0q_A* 2fwl_A* 1foc_A* 1dt1_A*
Probab=28.90 E-value=20 Score=29.61 Aligned_cols=46 Identities=22% Similarity=0.421 Sum_probs=29.9
Q ss_pred CCcchhhHHHHHhhccCcc-----cCCCCcccccccCCCCCc--hHHHHHHHH
Q 009666 453 DTLEAKDILVHLERNWNMT-----LPGFSGDEIKTFRKPLVC--DIHKERLAA 498 (529)
Q Consensus 453 dTLEvKDVQLhLERnWNI~-----IPGFssDEIR~~RK~~pt--EaHKQRMAL 498 (529)
+.=|++||.-||...|+-. .+-+..++|+..|+...+ +.++.|-+|
T Consensus 76 sd~ei~~l~~Yl~~~~~~~~~~~~~~~~t~~~v~~~r~~~~~~~~~~~~r~~~ 128 (131)
T 1c52_A 76 KDEEIAAVLNHIATAWGDAKKVKGFKPFTAEEVKKLRAKKLTPQQVLAERKKL 128 (131)
T ss_dssp CHHHHHHHHHHHHHTTSTGGGSTTCCCCCHHHHHHHTTSCCCHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHcCCccCCCCCCCCCHHHHHHHHhccCCHHHHHHHHHhh
Confidence 3347888888888888865 345666777776665443 556666443
No 266
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=28.88 E-value=71 Score=28.37 Aligned_cols=47 Identities=15% Similarity=0.147 Sum_probs=23.0
Q ss_pred cCCHHHHHHHHHhhCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 009666 401 ILTKRSIQELVNQIDPSERLDP-DVEDILVDIAEDFVESITMFGCSLAKHRK 451 (529)
Q Consensus 401 ILtKrKLqELVrqIDPsesLDp-DVEELLLeIADDFVDsVvs~ACrLAKHRK 451 (529)
+-....|.+++.++ -||. |+++++..+.++=+.+.+....++|+.+|
T Consensus 132 i~~~~~L~~~a~~~----Gl~~~d~~~~~~~~~s~~~~~~v~~~~~~a~~~g 179 (226)
T 1r4w_A 132 ITESQNILSAAEKA----GMATAQAQHLLNKISTELVKSKLRETTGAACKYG 179 (226)
T ss_dssp CSSHHHHHHHHHHT----TCCHHHHHHHHTTTTSHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHc----CCCchhHHHHHHHcCCHHHHHHHHHHHHHHHHCC
Confidence 33455555665553 2444 35555544444444455555555555443
No 267
>3qbr_A SJA, sjchgc06286 protein; helical bundle, BCL-2-like fold, apoptosis; HET: NHE; 2.60A {Schistosoma japonicum}
Probab=28.78 E-value=1e+02 Score=28.95 Aligned_cols=49 Identities=14% Similarity=0.233 Sum_probs=35.4
Q ss_pred HHHHHHhh--CCCCCCCHH-HHHHHHHHHHHH--------HHHHHHHHHHhhhhcCCCCc
Q 009666 407 IQELVNQI--DPSERLDPD-VEDILVDIAEDF--------VESITMFGCSLAKHRKSDTL 455 (529)
Q Consensus 407 LqELVrqI--DPsesLDpD-VEELLLeIADDF--------VDsVvs~ACrLAKHRKSdTL 455 (529)
|.+|++++ ++...|+++ |++.+.++||+- |-.++.|++.||++-....+
T Consensus 82 l~~l~~ql~~~~~~~lt~~tA~~~F~~Va~eLFDGiNWGRIVaLfaFgg~La~~~~~~g~ 141 (179)
T 3qbr_A 82 IEPVAQSLGIDSDKPVDKTALEIFYLEILNGLFEKLNWGRIVAMFAFLRILVLRLSKHGH 141 (179)
T ss_dssp SHHHHHHHTCSSSSCCCHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHhhccccccCCCchHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHcCc
Confidence 45566655 455567666 789999999964 44577899999998766543
No 268
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=28.71 E-value=1.8e+02 Score=24.37 Aligned_cols=20 Identities=10% Similarity=0.195 Sum_probs=12.4
Q ss_pred CCcCCccCCHHHHHHHHHhh
Q 009666 395 DEFGNRILTKRSIQELVNQI 414 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqI 414 (529)
+.+++..|++..|.++++.+
T Consensus 113 D~d~~G~I~~~el~~~l~~~ 132 (198)
T 1juo_A 113 DTDRSGTVDPQELQKALTTM 132 (198)
T ss_dssp CTTCCSEECHHHHHHHHHHT
T ss_pred CCCCCCcCCHHHHHHHHHHh
Confidence 34455566666676666665
No 269
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=28.66 E-value=20 Score=30.84 Aligned_cols=44 Identities=16% Similarity=0.208 Sum_probs=32.2
Q ss_pred HHHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 009666 406 SIQELVNQIDP--------SERLDPDVEDILVDIAEDFVESITMFGCSLAKH 449 (529)
Q Consensus 406 KLqELVrqIDP--------sesLDpDVEELLLeIADDFVDsVvs~ACrLAKH 449 (529)
.|..|+.+++. ...=|++|.++|.+||||=.+-|..+---|-+.
T Consensus 23 ai~aL~~EleAI~~Y~q~A~~t~D~evk~vl~~iadEEkeH~g~~l~~Lrr~ 74 (95)
T 1zpy_A 23 AIISLREELEAVDLYNQRVNACKDKELKAILAHNRDEEKEHAAMLLEWIRRC 74 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455555543 457799999999999999888777776666554
No 270
>3fh2_A Probable ATP-dependent protease (heat shock prote; struct genomics, PSI2, MCSG, protein structure initiative; 1.60A {Corynebacterium glutamicum}
Probab=28.38 E-value=48 Score=27.88 Aligned_cols=32 Identities=9% Similarity=0.082 Sum_probs=28.0
Q ss_pred HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 436 VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 436 VDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+..|++.|..+|+.++.+.|++.+|.+.|-++
T Consensus 86 ~~~vL~~A~~~a~~~~~~~i~~eHlLlall~~ 117 (146)
T 3fh2_A 86 AKKVLELSLREGLQMGHKYIGTEFLLLGLIRE 117 (146)
T ss_dssp HHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcCcHHHHHHHHHhC
Confidence 45788899999999999999999999988654
No 271
>1dly_A Hemoglobin; oxygen storage/transport complex; HET: HEM; 1.80A {Chlamydomonas eugametos} SCOP: a.1.1.1 PDB: 1uvx_A*
Probab=28.37 E-value=87 Score=28.02 Aligned_cols=80 Identities=15% Similarity=0.166 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCC---CCcccccc-cCCC--CCchHHHHH-HH
Q 009666 425 EDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPG---FSGDEIKT-FRKP--LVCDIHKER-LA 497 (529)
Q Consensus 425 EELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPG---FssDEIR~-~RK~--~ptEaHKQR-MA 497 (529)
||.|..|+|+|.+.|...- .|+..-.. .+.....-+|..-|-..+-| |....++. -... ..+++|..| +.
T Consensus 52 ~~~I~~lVd~FY~rv~~Dp-~l~~~F~~--~D~~~~~~kl~~Fl~~~lGGp~~Y~g~~m~~~H~~l~~~I~~~~fd~Wl~ 128 (164)
T 1dly_A 52 REAVEAAVDKFYNKIVADP-TVSTYFSN--TDMKVQRSKQFAFLAYALGGASEWKGKDMRTAHKDLVPHLSDVHFQAVAR 128 (164)
T ss_dssp HHHHHHHHHHHHHHHHTCT-TTGGGGTT--SCHHHHHHHHHHHHHHHTTSSSCCCSCCHHHHHTTCSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCh-HHHHhcCC--CCHHHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHhhcCCCCHHHHHHHHH
Confidence 6778899999999987743 34444332 13333444444444444433 33333431 1223 456666655 67
Q ss_pred HHHHHHhhhh
Q 009666 498 AVSFTLDIMC 507 (529)
Q Consensus 498 LIRKtiK~m~ 507 (529)
+++++|++..
T Consensus 129 ~~~~aL~e~~ 138 (164)
T 1dly_A 129 HLSDTLTELG 138 (164)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhC
Confidence 7888888864
No 272
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=28.33 E-value=49 Score=33.96 Aligned_cols=42 Identities=12% Similarity=0.283 Sum_probs=33.0
Q ss_pred HHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 426 DILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 426 ELLLeIADDF----VDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+.|.++++.| |..||..|+.+|-.++.+.|+.+|+.-.|+|-
T Consensus 377 ~~lA~~t~G~sGADi~~l~~eA~~~air~~~~~i~~~d~~~Al~~v 422 (437)
T 4b4t_L 377 EAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRKV 422 (437)
T ss_dssp HHHHHTCCSCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 3444554433 77899999999988999999999999998874
No 273
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas}
Probab=28.27 E-value=12 Score=35.02 Aligned_cols=24 Identities=21% Similarity=0.231 Sum_probs=10.1
Q ss_pred HHHHHH--hhhhhheeeecceeeEee
Q 009666 498 AVSFTL--DIMCLLVIYKDACLSVHF 521 (529)
Q Consensus 498 LIRKti--K~m~~~~~~~~~~~~~~~ 521 (529)
+++|-+ ++++.+|+.+...|.-|.
T Consensus 396 ~a~~~l~~~~~~~~~~~~~~~~~~~~ 421 (424)
T 3amj_B 396 AFARHVKRENLITVVVGGKASLEHHH 421 (424)
T ss_dssp HHHHHCCGGGCEEEEEECC-------
T ss_pred HHHHhcCccceEEEEECChhhhhhcc
Confidence 344444 366677777777776554
No 274
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=28.10 E-value=20 Score=33.35 Aligned_cols=49 Identities=16% Similarity=0.219 Sum_probs=26.1
Q ss_pred CHHHHHHHHHhhCCCCCCCHHH-HHHHHHHHHH----HHHHHHHHHHHhhhhcC
Q 009666 403 TKRSIQELVNQIDPSERLDPDV-EDILVDIAED----FVESITMFGCSLAKHRK 451 (529)
Q Consensus 403 tKrKLqELVrqIDPsesLDpDV-EELLLeIADD----FVDsVvs~ACrLAKHRK 451 (529)
+.+...++++.+-....++.++ .+.|.++.+. =|++++..||.+|..|.
T Consensus 187 ~~~~r~~il~~~l~~~~~~~~~~~~~la~~~~g~sg~dl~~l~~~a~~~a~~~~ 240 (301)
T 3cf0_A 187 DEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRES 240 (301)
T ss_dssp CHHHHHHHHHHHHTTSCBCSSCCHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHccCCCCccchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4555555665543333332221 2334444433 36788888888887653
No 275
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=28.01 E-value=1e+02 Score=30.29 Aligned_cols=20 Identities=30% Similarity=0.383 Sum_probs=11.3
Q ss_pred CCcCCccCCHHHHHHHHHhh
Q 009666 395 DEFGNRILTKRSIQELVNQI 414 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqI 414 (529)
|.+++..|++..|..+++.+
T Consensus 365 D~d~dG~I~~~El~~~l~~~ 384 (504)
T 3q5i_A 365 DKNGDGQLDKKELIEGYNVL 384 (504)
T ss_dssp CTTCSSEECHHHHHHHHHHH
T ss_pred CCCCCCeEcHHHHHHHHHHh
Confidence 34455566666666555554
No 276
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=28.00 E-value=1.5e+02 Score=24.83 Aligned_cols=69 Identities=7% Similarity=0.168 Sum_probs=36.6
Q ss_pred CCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH----------HHHHHHH-----------HHHHHHhhhhcCCCCcc
Q 009666 398 GNRILTKRSIQELVNQIDPSERLDPDVEDILVDIA----------EDFVESI-----------TMFGCSLAKHRKSDTLE 456 (529)
Q Consensus 398 ~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIA----------DDFVDsV-----------vs~ACrLAKHRKSdTLE 456 (529)
++..|++..|.++++.+.. ..+.+..+.+.+.. +||+.-+ +..+.++.-..+...|+
T Consensus 36 ~~G~i~~~e~~~~l~~~~~--~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~ 113 (204)
T 1jba_A 36 PSGTLFMHEFKRFFKVPDN--EEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCID 113 (204)
T ss_dssp TTCCEEHHHHHHHHHCCSS--STTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHHHHCSSCSSCBC
T ss_pred CCCCcCHHHHHHHHHHhcC--CCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHHHHHHHhCCCCCCcCc
Confidence 4556677777766666544 23333222232222 2444332 33444555455666788
Q ss_pred hhhHHHHHhhcc
Q 009666 457 AKDILVHLERNW 468 (529)
Q Consensus 457 vKDVQLhLERnW 468 (529)
..++.-.|...+
T Consensus 114 ~~E~~~~l~~~~ 125 (204)
T 1jba_A 114 RQELLDIVESIY 125 (204)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888777776543
No 277
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=27.93 E-value=89 Score=31.66 Aligned_cols=40 Identities=15% Similarity=0.317 Sum_probs=28.1
Q ss_pred HHHHHHHHHhhCCCCCCCH--------HHHHHHH------HHHHHHHHHHHHHH
Q 009666 404 KRSIQELVNQIDPSERLDP--------DVEDILV------DIAEDFVESITMFG 443 (529)
Q Consensus 404 KrKLqELVrqIDPsesLDp--------DVEELLL------eIADDFVDsVvs~A 443 (529)
+++|...++.+-....||+ |++++|+ +++++||++|-+.+
T Consensus 6 ~~~l~~~~~~~~~~~~~~e~~~~~~l~e~~~~Ll~adv~~~~~~~~~~~~~~~~ 59 (433)
T 2xxa_A 6 TDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKA 59 (433)
T ss_dssp HHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4678888888888888887 4555564 46777777775543
No 278
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=27.70 E-value=56 Score=33.07 Aligned_cols=72 Identities=10% Similarity=0.127 Sum_probs=51.9
Q ss_pred HHHHHHHHhhCCCCCCCHHHH-HH--------HHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCCC
Q 009666 405 RSIQELVNQIDPSERLDPDVE-DI--------LVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGF 475 (529)
Q Consensus 405 rKLqELVrqIDPsesLDpDVE-EL--------LLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGF 475 (529)
.-|++|.+.+|--..||.|.. ++ -.+.+|+.|-.++.....+-+.-+.-.+|+.||+-.|.- -++.+.|+
T Consensus 175 ~~l~~L~e~~D~~ividNeaL~~i~~~l~i~~af~~~N~li~~~v~~it~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~ 253 (364)
T 2vap_A 175 EGLERLKQHTDTLVVIPNEKLFEIVPNMPLKLAFKVADEVLINAVKGLVELITKDGLINVDFADVKAVMNN-GGLAMIGI 253 (364)
T ss_dssp HHHHHHHTTCSEEEEEEGGGHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSBCCCHHHHHHHHTT-CEEEEEEE
T ss_pred HHHHHHHHhCCeEEEEcHHHHHHHHccCChhhhhhhHHHHHHHHHhhhhHHhhcCCceeccHHHHHHhccC-CCeeEEEE
Confidence 346777777777666666632 22 245677777777777666667777778999999999977 67888888
Q ss_pred Cc
Q 009666 476 SG 477 (529)
Q Consensus 476 ss 477 (529)
+.
T Consensus 254 g~ 255 (364)
T 2vap_A 254 GE 255 (364)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 279
>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A*
Probab=27.67 E-value=47 Score=33.07 Aligned_cols=75 Identities=17% Similarity=0.233 Sum_probs=42.4
Q ss_pred HHHHHHhhCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cchhhHHHHHhh-----ccC--cccCCCCc
Q 009666 407 IQELVNQIDPSERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSDT-LEAKDILVHLER-----NWN--MTLPGFSG 477 (529)
Q Consensus 407 LqELVrqIDPsesLDpD-VEELLLeIADDFVDsVvs~ACrLAKHRKSdT-LEvKDVQLhLER-----nWN--I~IPGFss 477 (529)
+.++++++-.+..|+.| +++++-+|.|.=+.++--.|..+|-+-|.++ =|+..+.-.+.. .|. +-+.|+|+
T Consensus 3 ~~~~i~k~~~g~~Lt~eEa~~~~~~i~~g~~~~~QiaAfL~alr~kget~eEiag~~~am~~~~~~~~~~~~vD~~gTGG 82 (345)
T 1o17_A 3 INEILKKLINKSDLEINEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKIDVPNAIDTAGTGG 82 (345)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCCCCTTCEECCC---
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCCCCceeeCCCCC
Confidence 45666666555666654 8888888888888888888888884444343 333333222222 232 45678888
Q ss_pred cccc
Q 009666 478 DEIK 481 (529)
Q Consensus 478 DEIR 481 (529)
|-.+
T Consensus 83 dg~~ 86 (345)
T 1o17_A 83 DGLG 86 (345)
T ss_dssp -CCC
T ss_pred CCCC
Confidence 7443
No 280
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=27.62 E-value=50 Score=30.39 Aligned_cols=60 Identities=15% Similarity=0.155 Sum_probs=37.2
Q ss_pred cCCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHH---HHHHHHhhhhcCCCCcchhhHHHHH
Q 009666 401 ILTKRSIQELVNQID--PSERLDPDVEDILVDIAEDFVESI---TMFGCSLAKHRKSDTLEAKDILVHL 464 (529)
Q Consensus 401 ILtKrKLqELVrqID--PsesLDpDVEELLLeIADDFVDsV---vs~ACrLAKHRKSdTLEvKDVQLhL 464 (529)
-+++..+.++++++- .+..+|+++.+.|.++++.-+..+ ++.++.++ .+.|+.+||.-.+
T Consensus 177 ~l~~~~~~~~l~~~~~~~~~~~~~~a~~~l~~~~~G~~r~~~~~l~~~~~~~----~~~i~~~~v~~~~ 241 (373)
T 1jr3_A 177 ALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG----DGQVSTQAVSAML 241 (373)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHSSSCHHHHHHHHHHHHHHT----TTCBCHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHhc----CCcccHHHHHHHh
Confidence 356777888877652 245789999998888866443333 33333332 2457777775554
No 281
>3n1e_A Vacuolar protein sorting-associated protein 54; spinal muscular atrophy, vesicle trafficking, golgi apparatu tethering complex, GARP.; 1.70A {Mus musculus} PDB: 3n1b_A
Probab=27.58 E-value=95 Score=27.94 Aligned_cols=59 Identities=10% Similarity=0.125 Sum_probs=44.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCC---cchhhHHHHHhhccCcccCCCCccccc
Q 009666 421 DPDVEDILVDIAEDFVESITMFGCSLAKHRKSDT---LEAKDILVHLERNWNMTLPGFSGDEIK 481 (529)
Q Consensus 421 DpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdT---LEvKDVQLhLERnWNI~IPGFssDEIR 481 (529)
+++|+.++..+-..|-+...+.-.++.-...... +-+.||.|+.++-=+ |.||+..|+.
T Consensus 74 ~~~v~~Im~~Vf~~fk~~l~~~~~~~~i~~~~G~q~g~v~~Dv~ff~~~L~~--L~g~~d~~l~ 135 (141)
T 3n1e_A 74 EEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQA--LKGLKDLDLN 135 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSSHHHHHHHHHHHHHHHHHHT--STTCTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcccchHHHHHHHHHHHHhcc--cCCCCccccc
Confidence 4569999999999999999888777754333332 246999999998744 5588887765
No 282
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=27.52 E-value=1.1e+02 Score=27.54 Aligned_cols=64 Identities=14% Similarity=0.220 Sum_probs=36.6
Q ss_pred CHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHH----HHHHHHHHHhhhhcCC------------CCcchhhHHHHH
Q 009666 403 TKRSIQELVNQID--PSERLDPDVEDILVDIAEDFV----ESITMFGCSLAKHRKS------------DTLEAKDILVHL 464 (529)
Q Consensus 403 tKrKLqELVrqID--PsesLDpDVEELLLeIADDFV----DsVvs~ACrLAKHRKS------------dTLEvKDVQLhL 464 (529)
+.+...++++.+- -...++++..+.|.+.++.|. +.++..|+..|..+.. ..|+.+|+.-.|
T Consensus 190 ~~~~r~~il~~~~~~~~~~~~~~~~~~la~~~~g~~~~~l~~l~~~a~~~a~r~~~~~~~~~~~~~~~~~i~~~d~~~a~ 269 (297)
T 3b9p_A 190 DEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRAITEQDFHSSL 269 (297)
T ss_dssp CHHHHHHHHHHHHGGGSCCSCHHHHHHHHHHTTTCCHHHHHHHHHHHTTHHHHTCC--------CCCCCCCCHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhhhhcccccccccCCcCHHHHHHHH
Confidence 4444445544431 134578888888888777654 4566666666665532 345566655544
Q ss_pred hh
Q 009666 465 ER 466 (529)
Q Consensus 465 ER 466 (529)
++
T Consensus 270 ~~ 271 (297)
T 3b9p_A 270 KR 271 (297)
T ss_dssp TS
T ss_pred HH
Confidence 43
No 283
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=27.49 E-value=86 Score=26.61 Aligned_cols=33 Identities=12% Similarity=0.288 Sum_probs=21.2
Q ss_pred CCCcCCccCCHHHHHHHHHhhCCCCCCCH-HHHHHH
Q 009666 394 SDEFGNRILTKRSIQELVNQIDPSERLDP-DVEDIL 428 (529)
Q Consensus 394 ~~e~~nrILtKrKLqELVrqIDPsesLDp-DVEELL 428 (529)
.+.+++..|++..|..+++.++. .+++ ++++++
T Consensus 19 ~D~d~dG~I~~~E~~~~l~~~g~--~~~~~~~~~l~ 52 (188)
T 1s6i_A 19 IDTDNSGTITFDELKDGLKRVGS--ELMESEIKDLM 52 (188)
T ss_dssp TSSSSSSCEEHHHHHHHHTTTTC--CCCHHHHHHHH
T ss_pred HCCCCCCcCCHHHHHHHHHHcCC--CCCHHHHHHHH
Confidence 34567778888888888887743 3444 344443
No 284
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=27.41 E-value=1.9e+02 Score=23.56 Aligned_cols=36 Identities=11% Similarity=0.067 Sum_probs=17.4
Q ss_pred HhhhhcCCCCcchhhHHHHHh----hccCcccCCCCcccc
Q 009666 445 SLAKHRKSDTLEAKDILVHLE----RNWNMTLPGFSGDEI 480 (529)
Q Consensus 445 rLAKHRKSdTLEvKDVQLhLE----RnWNI~IPGFssDEI 480 (529)
++|-..+...|+..+....+. +.-|..||.-....+
T Consensus 55 ~~~D~d~dG~id~~EF~~~m~~~~~~~~g~~lP~~LP~~l 94 (106)
T 1eh2_A 55 ELSDIDHDGMLDRDEFAVAMFLVYCALEKEPVPMSLPPAL 94 (106)
T ss_dssp HHHCSSCSSBCCHHHHHHHHHHHHHHHHTCCCCSSCCTTT
T ss_pred HHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCCCCCCCccc
Confidence 344455555666655422221 122556666655544
No 285
>3nuf_A PRD-containing transcription regulator; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PG4; 1.38A {Lactobacillus casei}
Probab=27.31 E-value=28 Score=31.15 Aligned_cols=101 Identities=15% Similarity=0.239 Sum_probs=62.7
Q ss_pred hCCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHhhhhcCCCCcchhhHH--HHH-----hhccCcccCCCCcccccccCC
Q 009666 414 IDPSERLDPDVEDILVDI-AEDFVESITMFGCSLAKHRKSDTLEAKDIL--VHL-----ERNWNMTLPGFSGDEIKTFRK 485 (529)
Q Consensus 414 IDPsesLDpDVEELLLeI-ADDFVDsVvs~ACrLAKHRKSdTLEvKDVQ--LhL-----ERnWNI~IPGFssDEIR~~RK 485 (529)
+|.+.+|..+|.+++-+= +++-++.|+...-.++...+-..-+++-+- -|| .-.-|=.+|+. -+
T Consensus 5 ~~~~~~~~~e~~~~i~~s~~~~~~~~ll~~i~~ll~~~~I~~~~vQ~qmL~sHl~Amv~Rs~~GE~LPeV--------d~ 76 (119)
T 3nuf_A 5 LDANVELPTEVKAMIEQSSDAQAATALVNYVIKLAAAAEIHFTDLQLQVLTNHLIEMLGRSKSGEQLPAV--------DP 76 (119)
T ss_dssp CCCCCCCCHHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC--------CG
T ss_pred hhhhccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhccCCcCCcc--------CH
Confidence 577888999999988742 233444555555556665554433333221 122 22223444544 33
Q ss_pred CCCchHHHHHHHHHHHHHhhhhhheeeecceeeEeee
Q 009666 486 PLVCDIHKERLAAVSFTLDIMCLLVIYKDACLSVHFT 522 (529)
Q Consensus 486 ~~ptEaHKQRMALIRKtiK~m~~~~~~~~~~~~~~~~ 522 (529)
..-.|..++=|++-++.++.+..|-.-.-.-|||||-
T Consensus 77 sLF~EIS~es~~LA~~Vv~~~g~L~~eE~~LLSVHFE 113 (119)
T 3nuf_A 77 TMFAEVSQKSLDLADQVVQHIGHLEVAEKYVLSIHFE 113 (119)
T ss_dssp GGGTTSCHHHHHHHHHHHHHHCSSCTTHHHHHHHHHH
T ss_pred HHHHHcCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 3455777889999999999998876656667899984
No 286
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=27.13 E-value=1.7e+02 Score=22.97 Aligned_cols=43 Identities=14% Similarity=0.376 Sum_probs=26.4
Q ss_pred ccCCHHHHHHHHHh-hCC--CCCCCH-HHHHHHHHH---------HHHHHHHHHHH
Q 009666 400 RILTKRSIQELVNQ-IDP--SERLDP-DVEDILVDI---------AEDFVESITMF 442 (529)
Q Consensus 400 rILtKrKLqELVrq-IDP--sesLDp-DVEELLLeI---------ADDFVDsVvs~ 442 (529)
..|++..|..+++. +.. ...+++ +|+++|.++ -+|||.-+...
T Consensus 27 G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 82 (93)
T 4eto_A 27 FKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 82 (93)
T ss_dssp TSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred CeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 58999999999985 542 233444 466666554 34777655443
No 287
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=27.13 E-value=69 Score=29.15 Aligned_cols=52 Identities=15% Similarity=0.091 Sum_probs=32.7
Q ss_pred CCccCCHHHHHHHHHhhCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 009666 398 GNRILTKRSIQELVNQIDPSERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSD 453 (529)
Q Consensus 398 ~nrILtKrKLqELVrqIDPsesLDpD-VEELLLeIADDFVDsVvs~ACrLAKHRKSd 453 (529)
+..|-....|.+++.+++ ||.+ ++++|..+.++=+++.+....+.|+.+|..
T Consensus 129 g~di~d~~~L~~~a~~~G----Ld~~~~~~~l~~~~s~~~~~~l~~~~~~a~~~Gv~ 181 (234)
T 3rpp_A 129 NEDITEPQSILAAAEKAG----MSAEQAQGLLEKIATPKVKNQLKETTEAACRYGAF 181 (234)
T ss_dssp CCCCSSHHHHHHHHHHTT----CCHHHHHHHHTTTTSHHHHHHHHHHHHHHHHTTCS
T ss_pred CCCCCCHHHHHHHHHHcC----CCHHHHHHHHHHccCHHHHHHHHHHHHHHHHcCCC
Confidence 445667778888887753 6653 455555555555666667777777665543
No 288
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=27.03 E-value=2e+02 Score=22.19 Aligned_cols=77 Identities=6% Similarity=0.078 Sum_probs=0.0
Q ss_pred CCCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH------HHHHHHHHHH------------HHHHhhhhcCCCCc
Q 009666 394 SDEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI------AEDFVESITM------------FGCSLAKHRKSDTL 455 (529)
Q Consensus 394 ~~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI------ADDFVDsVvs------------~ACrLAKHRKSdTL 455 (529)
.+.+++..|++..|..+++.++. .+.++..+.|+.. -++|+.-+.. .++++.-..+...|
T Consensus 16 ~D~d~~G~i~~~el~~~l~~~g~--~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I 93 (143)
T 3j04_B 16 IDQNRDGFIDKEDLHDMLASMGK--NPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFI 93 (143)
T ss_dssp TCSSCTTCCCHHHHHHHHHHTSC--CCCHHHHHTTTTTSSSCCCHHHHHHHHHHTTTSSCCHHHHHHHHTTSCSSSCCCC
T ss_pred hCCCCCCCcCHHHHHHHHHHhCC--CCCHHHHHHHHHhCCCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHHCCCCCCeE
Q ss_pred chhhHHHHHhhccCcccC
Q 009666 456 EAKDILVHLERNWNMTLP 473 (529)
Q Consensus 456 EvKDVQLhLERnWNI~IP 473 (529)
+..++...|. .+|..+.
T Consensus 94 ~~~El~~~l~-~~g~~~~ 110 (143)
T 3j04_B 94 HEDHLRELLT-TMGDRFT 110 (143)
T ss_dssp CTTTHHHHHH-TSSSCCC
T ss_pred cHHHHHHHHH-HcCCCCC
No 289
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=27.03 E-value=95 Score=25.85 Aligned_cols=67 Identities=15% Similarity=0.092 Sum_probs=38.0
Q ss_pred CCHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccC
Q 009666 402 LTKRSIQELVNQID-PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWN 469 (529)
Q Consensus 402 LtKrKLqELVrqID-PsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWN 469 (529)
++...+..||+=|= ....++++...-|+.+||.|--.-+...|.-.-.+.-+.-.+.++ +.+-..||
T Consensus 81 ~~~~~f~~~l~~~Yt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~-~~~A~~~~ 148 (172)
T 3htm_A 81 VEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEI-LILADLHS 148 (172)
T ss_dssp SCHHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHH-HHHHHHTT
T ss_pred CCHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHhC
Confidence 46777788887662 334566666666788999886555555555443333332233443 33333444
No 290
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=26.91 E-value=1.4e+02 Score=25.48 Aligned_cols=63 Identities=8% Similarity=0.181 Sum_probs=32.2
Q ss_pred HHHHHHHHHhhCC--CCCCCHH-HHHHHHHHH-----HH-HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 404 KRSIQELVNQIDP--SERLDPD-VEDILVDIA-----ED-FVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 404 KrKLqELVrqIDP--sesLDpD-VEELLLeIA-----DD-FVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
..+|.++.+.+|. +..|+.+ ...+|..+. ++ -.+.++...++.+-..+...|+..+..-.|.+
T Consensus 92 ~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 163 (211)
T 2ggz_A 92 EQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK 163 (211)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHh
Confidence 4456666666654 3355543 444444432 11 11234444455554455666777777665553
No 291
>2kua_A BCL-2-like protein 10; BOO, DIVA, apoptosis, BH3-only, membrane, mitochondri nucleus, transmembrane; NMR {Mus musculus}
Probab=26.90 E-value=52 Score=29.92 Aligned_cols=29 Identities=10% Similarity=0.278 Sum_probs=17.9
Q ss_pred CHHHHHHHHHHHHH-HHH----------HHHHHHHHhhhh
Q 009666 421 DPDVEDILVDIAED-FVE----------SITMFGCSLAKH 449 (529)
Q Consensus 421 DpDVEELLLeIADD-FVD----------sVvs~ACrLAKH 449 (529)
.+++.+++..+|++ |-| .++.|++.||+|
T Consensus 69 ~~~a~~~f~~Va~elF~ddg~iNWGRIVaLfaF~g~La~~ 108 (170)
T 2kua_A 69 RGNRLELVKQMADKLLSKDQDFSWSQLVMLLAFAGTLMNQ 108 (170)
T ss_dssp TSCHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHCCC
T ss_pred cchHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHh
Confidence 34456666777766 543 356677777776
No 292
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=26.86 E-value=66 Score=24.42 Aligned_cols=63 Identities=10% Similarity=0.059 Sum_probs=28.5
Q ss_pred HHHHHHHHhhCCC--CCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 405 RSIQELVNQIDPS--ERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 405 rKLqELVrqIDPs--esLDpD-VEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
..|.++.+.+|.+ ..|+.+ ...+|..+...+-+..+...++.+-..+...|+..+..-.|.+.
T Consensus 24 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~~~ 89 (105)
T 1wlz_A 24 HAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSSE 89 (105)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC--
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcc
Confidence 3444444444432 234432 33333333222223333333344444556678888886666543
No 293
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=26.85 E-value=86 Score=24.04 Aligned_cols=35 Identities=17% Similarity=0.497 Sum_probs=24.2
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHH-HHHHHHHH
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPD-VEDILVDI 431 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpD-VEELLLeI 431 (529)
+.+++..|++..|..+++.+. ..++++ +++++.++
T Consensus 39 D~d~~G~I~~~El~~~l~~~g--~~~~~~e~~~l~~~~ 74 (94)
T 2kz2_A 39 DKDGNGYISAAELRHVMTNLG--EKLTDEEVDEMIREA 74 (94)
T ss_dssp CTTCCSCBCHHHHHHHHHHHT--CCCCHHHHHHHHHHH
T ss_pred CCCCcCcCCHHHHHHHHHHhC--CCCCHHHHHHHHHHh
Confidence 456777899999999999985 345554 55544443
No 294
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=26.71 E-value=1.3e+02 Score=26.23 Aligned_cols=77 Identities=12% Similarity=0.092 Sum_probs=44.2
Q ss_pred CHHHHHHHHHhhC-CCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh----ccCcccCCCC
Q 009666 403 TKRSIQELVNQID-PSERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLER----NWNMTLPGFS 476 (529)
Q Consensus 403 tKrKLqELVrqID-PsesLDpD-VEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER----nWNI~IPGFs 476 (529)
.+.+|.++.+.+| .+..|+.+ +.++|..+ ..-++.+...+++|-..+...|+..+....+.. .-|+.||...
T Consensus 49 e~~~l~~~F~~fDd~dG~Is~~El~~~l~~~--gl~~~el~~I~~~~D~d~dG~Ld~~EF~~am~li~~~~~G~~lP~~L 126 (139)
T 2jq6_A 49 DKPTYDEIFYTLSPVNGKITGANAKKEMVKS--KLPNTVLGKIWKLADVDKDGLLDDEEFALANHLIKVKLEGHELPADL 126 (139)
T ss_dssp THHHHHHHHHHSCCSSSEEEHHHHHHHHHHT--TCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHHHTTSCCCSCC
T ss_pred HHHHHHHHHHHhCCCCCeECHHHHHHHHHHh--CcCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHcCCCCCccc
Confidence 3667778888887 22245544 44555432 133455666666777777777887775333322 2256677665
Q ss_pred ccccc
Q 009666 477 GDEIK 481 (529)
Q Consensus 477 sDEIR 481 (529)
.+.+.
T Consensus 127 P~~l~ 131 (139)
T 2jq6_A 127 PPHLV 131 (139)
T ss_dssp CTTSS
T ss_pred CcccC
Confidence 55543
No 295
>2zc2_A DNAD-like replication protein; GI 24377835, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Streptococcus mutans UA159}
Probab=26.64 E-value=65 Score=24.89 Aligned_cols=44 Identities=16% Similarity=-0.036 Sum_probs=28.0
Q ss_pred CCCHHHHHHHHHHHHH--HHHHHHHHHHHhhhhcCCCCcchhhHHHHH
Q 009666 419 RLDPDVEDILVDIAED--FVESITMFGCSLAKHRKSDTLEAKDILVHL 464 (529)
Q Consensus 419 sLDpDVEELLLeIADD--FVDsVvs~ACrLAKHRKSdTLEvKDVQLhL 464 (529)
.|.+--.+.|.++.|+ |=.+||..||+.|...+. +..+=|.-+|
T Consensus 17 ~ls~~e~~~i~~w~~~~~~~~elI~~A~~~a~~~~~--~s~~Yi~~Il 62 (78)
T 2zc2_A 17 MLSPFELEDLQKTVSDDKTDPDLVRSALREAVFNGK--TNWNYIQAIL 62 (78)
T ss_dssp CCCHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHTC--CCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCC--CCHHHHHHHH
Confidence 5666667777777777 777888888888864333 3344343333
No 296
>2ewo_A Putative agmatine deiminase; Q8DW17, SMR6, X-RAY, structural genomics, PSI, protein structure initiative; 2.90A {Streptococcus mutans} SCOP: d.126.1.6
Probab=26.49 E-value=28 Score=35.46 Aligned_cols=68 Identities=18% Similarity=0.085 Sum_probs=48.6
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhhccC----cccC-CCCccccc----c------------cCCCCCchHHHHHHH
Q 009666 439 ITMFGCSLAKHRKSDTLEAKDILVHLERNWN----MTLP-GFSGDEIK----T------------FRKPLVCDIHKERLA 497 (529)
Q Consensus 439 Vvs~ACrLAKHRKSdTLEvKDVQLhLERnWN----I~IP-GFssDEIR----~------------~RK~~ptEaHKQRMA 497 (529)
+++..|.|-++|+-. +.-.+|.-.|++.+| |||| |+..||-. . +.-..+.+.|-+++.
T Consensus 174 ltTe~clLn~nRNp~-lsk~eie~~Lk~~LG~~kvIWL~~gl~~DdTdgHiD~~arfv~p~~vl~~~~~d~~dp~y~~~~ 252 (377)
T 2ewo_A 174 LVTEMCLLHPSRNPH-LTKEDIEDKLKDYLNCVKVLWVKDGIDPYETNGHIDDVACFIRPGEVACIYTDDKEHPFYQEAK 252 (377)
T ss_dssp EEEHHHHTSTTSCTT-SCHHHHHHHHHHHHCCSEEEEECCCSCTTTTSSCSTTTEEEEETTEEEEBCCCCTTSTTHHHHH
T ss_pred EEEcccccCCCCCCc-cCHHHHHHHHHHHcCCCEEEEcCCccCCCCCCCchhheeEEeCCCEEEEEecCCCCCccHHHHH
Confidence 567899999999987 678899899999888 4567 66555411 1 111234556778888
Q ss_pred HHHHHHhhhh
Q 009666 498 AVSFTLDIMC 507 (529)
Q Consensus 498 LIRKtiK~m~ 507 (529)
.+.+.|++++
T Consensus 253 ~~~~~L~~~~ 262 (377)
T 2ewo_A 253 AAYDFLSQQT 262 (377)
T ss_dssp HHHHHHHTCB
T ss_pred HHHHHHHhhh
Confidence 8888888763
No 297
>4h5l_A Nucleoprotein; nucleocapsid protein, N protein, RNA binding, RNP, viral protein; 2.75A {Toscana virus}
Probab=26.44 E-value=1.1e+02 Score=30.12 Aligned_cols=84 Identities=15% Similarity=0.237 Sum_probs=58.5
Q ss_pred cCCccCCHHHHHHHHHhhCCCCCCCHH-HHHHHHHHH----HHHHHHHHHHHHHhhhhcCCCCc--------chhhHHHH
Q 009666 397 FGNRILTKRSIQELVNQIDPSERLDPD-VEDILVDIA----EDFVESITMFGCSLAKHRKSDTL--------EAKDILVH 463 (529)
Q Consensus 397 ~~nrILtKrKLqELVrqIDPsesLDpD-VEELLLeIA----DDFVDsVvs~ACrLAKHRKSdTL--------EvKDVQLh 463 (529)
-++..+....|.++|.++ .-.-+|.. |..+|.|-+ |+|.+|+ ....-|+--||...- |-|...-.
T Consensus 13 ~~~~~~d~~~i~~~v~~f-~YqGFDa~~vi~~l~erg~~~g~~~~~D~-k~mIVl~ltRGNk~~km~~kms~~Gk~~~~~ 90 (253)
T 4h5l_A 13 FLDESADSGTINAWVNEF-AYQGFDPKRIVQLVKERGTAKGRDWKKDV-KMMIVLNLVRGNKPEAMMKKMSEKGASIVAN 90 (253)
T ss_dssp TTSSCCCHHHHHHHHHHH-SBCSSCHHHHHHHHHHHHHHTTCCHHHHH-HHHHHHHHHHCSCHHHHHHTSCHHHHHHHHH
T ss_pred HhcccccHHHHHHHHHHH-HhcCCCHHHHHHHHHHHhccchhhHHHhH-HHHhhhhhhcCCCHHHHHHHhCHHHHHHHHH
Confidence 356678888999999998 34567766 677888887 7899998 566777877874411 23444556
Q ss_pred HhhccCcccCCCCcccccc
Q 009666 464 LERNWNMTLPGFSGDEIKT 482 (529)
Q Consensus 464 LERnWNI~IPGFssDEIR~ 482 (529)
|-..||+..-+-+.|+|..
T Consensus 91 Li~~Y~Lk~~~~~r~~lTL 109 (253)
T 4h5l_A 91 LISVYQLKEGNPGRDTITL 109 (253)
T ss_dssp HHHHHTBCSSSCCTTCBCH
T ss_pred HHHHhCcccCCCCcccccH
Confidence 7777898875555555543
No 298
>1pb6_A Hypothetical transcriptional regulator YCDC; helix-loop-helix, dimer, structural genomics, PSI, protein structure initiative; 2.50A {Escherichia coli} PDB: 3loc_A*
Probab=26.34 E-value=67 Score=26.34 Aligned_cols=13 Identities=15% Similarity=0.179 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHHH
Q 009666 424 VEDILVDIAEDFV 436 (529)
Q Consensus 424 VEELLLeIADDFV 436 (529)
+.+.+.++.+.++
T Consensus 126 ~~~~~~~~~~~~~ 138 (212)
T 1pb6_A 126 LMDELTGDLKALI 138 (212)
T ss_dssp THHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 299
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=26.25 E-value=1.4e+02 Score=23.58 Aligned_cols=19 Identities=11% Similarity=0.417 Sum_probs=10.2
Q ss_pred CcCCccCCHHHHHHHHHhh
Q 009666 396 EFGNRILTKRSIQELVNQI 414 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqI 414 (529)
.+++..|++..|..+++.+
T Consensus 94 ~d~~G~I~~~el~~~l~~~ 112 (148)
T 1exr_A 94 RDGNGLISAAELRHVMTNL 112 (148)
T ss_dssp TTCSSCBCHHHHHHHHHHT
T ss_pred CCCCCcCCHHHHHHHHHHh
Confidence 3444455555555555554
No 300
>2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis}
Probab=26.23 E-value=9.2 Score=28.50 Aligned_cols=25 Identities=16% Similarity=0.542 Sum_probs=21.7
Q ss_pred cCCCCcchhhHHHHHhhccCcccCC
Q 009666 450 RKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
-|-|.|.+-++...||+.||+.||-
T Consensus 34 lG~DSl~~~~l~~~le~~fgi~i~~ 58 (79)
T 2l3v_A 34 LGADSLDTVELVMAFEEEFGVEIPD 58 (79)
T ss_dssp TCCCSSSSSSTTTTHHHHTTCCCCH
T ss_pred cCCCHHHHHHHHHHHHHHHCCCCCH
Confidence 3778899999999999999999863
No 301
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=26.22 E-value=1.6e+02 Score=24.05 Aligned_cols=30 Identities=7% Similarity=0.103 Sum_probs=19.3
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhhcc
Q 009666 439 ITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (529)
Q Consensus 439 Vvs~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (529)
.+..+.+..-..+...|+..++.-.|...|
T Consensus 100 ~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~ 129 (193)
T 1bjf_A 100 KLKWAFSMYDLDGNGYISKAEMLEIVQAIY 129 (193)
T ss_dssp HHHHHHHHHCTTCSSCEEHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCCCCeECHHHHHHHHHHHH
Confidence 344455555556677788888877776643
No 302
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=26.21 E-value=2e+02 Score=27.11 Aligned_cols=18 Identities=17% Similarity=0.353 Sum_probs=8.9
Q ss_pred HHHHHHHHhhCCCCCCCH
Q 009666 405 RSIQELVNQIDPSERLDP 422 (529)
Q Consensus 405 rKLqELVrqIDPsesLDp 422 (529)
++|...++++-....||+
T Consensus 7 ~~~~~~~~~~~~~~~~~~ 24 (295)
T 1ls1_A 7 ARLQEAIGRLRGRGRITE 24 (295)
T ss_dssp HHHHHHHHTTTTSCSCCH
T ss_pred HHHHHHHHHHhCCCCCCH
Confidence 345555555544445553
No 303
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=26.17 E-value=1.8e+02 Score=29.74 Aligned_cols=75 Identities=11% Similarity=0.170 Sum_probs=45.1
Q ss_pred HHHHHHHHHhhCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcc--cCC--CCc
Q 009666 404 KRSIQELVNQIDPSE--RLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMT--LPG--FSG 477 (529)
Q Consensus 404 KrKLqELVrqIDPse--sLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~--IPG--Fss 477 (529)
-+++++|.+.+.... .-|..+-|+..-+.+-|+.--+.++..++..=..--||+++|.-.+...|++. -|| ||+
T Consensus 188 ~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~ri~~l~pG~G~GG 267 (431)
T 3ojo_A 188 IEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDVIEMANKHPRVNIHQPGPGVGG 267 (431)
T ss_dssp HHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCCCCCCSCCCC
T ss_pred HHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHccCCCcccCCCCCCccc
Confidence 356777777765432 34566777777777777777666666555443333456666666666665544 355 555
Q ss_pred c
Q 009666 478 D 478 (529)
Q Consensus 478 D 478 (529)
-
T Consensus 268 ~ 268 (431)
T 3ojo_A 268 H 268 (431)
T ss_dssp C
T ss_pred c
Confidence 3
No 304
>2ao9_A Phage protein; structural genomics, nine-fold NCS., PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.90A {Bacillus cereus} SCOP: a.4.1.17
Probab=26.13 E-value=1.4e+02 Score=27.03 Aligned_cols=44 Identities=16% Similarity=0.153 Sum_probs=28.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH----hhhhcCCCCcchhhHHHHHhhc
Q 009666 421 DPDVEDILVDIAEDFVESITMFGCS----LAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 421 DpDVEELLLeIADDFVDsVvs~ACr----LAKHRKSdTLEvKDVQLhLERn 467 (529)
.++..+.|-+|||.|++.++..... +.|+- .-+++=+.|.|++.
T Consensus 72 ~p~~~~~l~~vad~~le~~~~e~~~~~~~~~k~~---~p~~~A~i~~LKn~ 119 (155)
T 2ao9_A 72 NQDFIAFKSEVADSFLAEKREQVYSKLMQLILGP---QPSVKAMQLYMQRF 119 (155)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHSS---SCCHHHHHHHHHHT
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCcHHHHHHHHHc
Confidence 3455567788888888766544332 33333 34667788999885
No 305
>2kci_A Putative acyl carrier protein; alpha, ACP, PCP, structural genomics, unknown function, PSI- 2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 2kjs_A* 2lml_A* 2kwm_A*
Probab=26.10 E-value=13 Score=30.19 Aligned_cols=32 Identities=19% Similarity=0.217 Sum_probs=26.0
Q ss_pred HHhhhhcCCCCcchhhHHHHHhhccCcccCCC
Q 009666 444 CSLAKHRKSDTLEAKDILVHLERNWNMTLPGF 475 (529)
Q Consensus 444 CrLAKHRKSdTLEvKDVQLhLERnWNI~IPGF 475 (529)
..+..--+-|.|++-++...||++||+.||.-
T Consensus 26 ~~l~~dlg~DSL~~veli~~lE~eF~I~i~~e 57 (87)
T 2kci_A 26 TSANDIDAWDSLSHMNLIVSLEVHYKIKFALG 57 (87)
T ss_dssp CCSTTCCCCCSTHHHHHHHHHHHHHTCCCCHH
T ss_pred CCcccccCCChHHHHHHHHHHHHHHCCccCHH
Confidence 34455568889999999999999999998754
No 306
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=26.10 E-value=77 Score=29.73 Aligned_cols=48 Identities=23% Similarity=0.387 Sum_probs=38.4
Q ss_pred HHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 009666 406 SIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSD 453 (529)
Q Consensus 406 KLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSd 453 (529)
.|+.|+..-++...++.|+-+++.+=-++|...|-....+.|+.+..+
T Consensus 128 sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~~~~~ 175 (216)
T 2pwq_A 128 SIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATGPKEE 175 (216)
T ss_dssp HHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC---
T ss_pred HHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCCCccc
Confidence 356677766788899999999999888899999999999999866544
No 307
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=25.96 E-value=1.1e+02 Score=26.28 Aligned_cols=19 Identities=21% Similarity=0.452 Sum_probs=11.9
Q ss_pred CcCCccCCHHHHHHHHHhh
Q 009666 396 EFGNRILTKRSIQELVNQI 414 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqI 414 (529)
.+++..|++..|..+++.+
T Consensus 27 ~d~~G~i~~~El~~~l~~l 45 (263)
T 2f33_A 27 ADGSGYLEGKELQNLIQEL 45 (263)
T ss_dssp TTCSSSBCSHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHH
Confidence 4455566766666666655
No 308
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=25.91 E-value=41 Score=34.31 Aligned_cols=73 Identities=14% Similarity=0.058 Sum_probs=51.4
Q ss_pred HHHHHHHHHhhCCCCCCCHHHH-HH---------HHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccC
Q 009666 404 KRSIQELVNQIDPSERLDPDVE-DI---------LVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLP 473 (529)
Q Consensus 404 KrKLqELVrqIDPsesLDpDVE-EL---------LLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IP 473 (529)
..-|++|++.+|-...||.|.. |+ -.+.+|+.|-.++.....+-+.-+.-.||+.||+-.|.- .++.+.
T Consensus 148 ~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~af~~~N~ll~~~vsgIt~~ir~pG~iNvD~~dv~t~L~~-~g~a~~ 226 (382)
T 2vxy_A 148 AGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFREADNVLRQGVQGISDLIATPGLINLDFADVKTIMSN-KGSALM 226 (382)
T ss_dssp HHHHHHHHHHCSEEEEEEHHHHHHHSCTTCCHHHHHHHHHHHHHHHHHHHHTTTSSCCTTCCCHHHHHHHTTC-SSEEEE
T ss_pred HHHHHHHHHhCCEEEEEccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCccccCHHHHHHhccC-CCceEE
Confidence 3447788888887777776642 21 244566666666665566666777778999999999987 688888
Q ss_pred CCCc
Q 009666 474 GFSG 477 (529)
Q Consensus 474 GFss 477 (529)
|++.
T Consensus 227 g~g~ 230 (382)
T 2vxy_A 227 GIGI 230 (382)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8874
No 309
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=25.89 E-value=2.9e+02 Score=23.10 Aligned_cols=70 Identities=10% Similarity=0.167 Sum_probs=39.6
Q ss_pred CCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH----------HHHHHH-----HHHHHHHhhhhcCCCCcchhh
Q 009666 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIA----------EDFVES-----ITMFGCSLAKHRKSDTLEAKD 459 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIA----------DDFVDs-----Vvs~ACrLAKHRKSdTLEvKD 459 (529)
+.+++..|++..|..+++.+ +..++++..+.|.+.+ +||+.- .+..+.++.-..+...|+.++
T Consensus 37 D~d~~G~I~~~El~~~l~~~--~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~F~~~D~d~~G~i~~~e 114 (191)
T 1y1x_A 37 DTDGSGAISVPELNAALSSA--GVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFILSMREGFRKRDSSGDGRLDSNE 114 (191)
T ss_dssp CTTCSSSBCHHHHHHHHCBT--TBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHCTTSSSCBCHHH
T ss_pred cCCCCCcCcHHHHHHHHHHc--CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHH
Confidence 34556667777766666332 1233333333333332 345432 345566666666777899999
Q ss_pred HHHHHhh
Q 009666 460 ILVHLER 466 (529)
Q Consensus 460 VQLhLER 466 (529)
+.-.|..
T Consensus 115 ~~~~l~~ 121 (191)
T 1y1x_A 115 VRAALLS 121 (191)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9888865
No 310
>2o2k_A Methionine synthase; C-shaped, twisted anti-parallel beta sheet, beta-meander region, transferase; 1.60A {Homo sapiens}
Probab=25.79 E-value=1.3e+02 Score=30.63 Aligned_cols=68 Identities=15% Similarity=0.231 Sum_probs=41.4
Q ss_pred HHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----CCCCcchhhHHHHHhhccCccc-CCCCc
Q 009666 406 SIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHR-----KSDTLEAKDILVHLERNWNMTL-PGFSG 477 (529)
Q Consensus 406 KLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHR-----KSdTLEvKDVQLhLERnWNI~I-PGFss 477 (529)
.+++++++. ....|+--.=+|--|||.++|.+++..+..-+.. +.+.++.+|+ +=|+.-|++. |||..
T Consensus 183 gide~~~~~--~~~~ddy~aiml~aLAdrlAEA~AE~lH~~VR~e~wGya~de~l~~~~l--~~e~Y~GiRpSPGYpa 256 (355)
T 2o2k_A 183 GVEELSKAY--EDDGDDYSSIMVKALGDRLAEAFAEELHERVRRELWAYCGSEQLDVADL--RRLRYKGIRPAPGYPS 256 (355)
T ss_dssp SHHHHHHHH--HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTCCCCHHHH--HTTCSSSBCCCTTSTT
T ss_pred hHHHHHHHH--HhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccCHHHH--HhccCCccCCCCCCCC
Confidence 567777766 1122332222335578888888888887766553 2345777775 4455556775 88875
No 311
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=25.77 E-value=67 Score=32.99 Aligned_cols=42 Identities=12% Similarity=0.253 Sum_probs=32.8
Q ss_pred HHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 426 DILVDIAEDF----VESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 426 ELLLeIADDF----VDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+.|.+.++.| |..||..|+.+|-.++...|+.+|+.-.|++-
T Consensus 377 ~~lA~~t~G~sGADi~~l~~eA~~~a~r~~~~~i~~~Df~~Al~~v 422 (434)
T 4b4t_M 377 QELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEV 422 (434)
T ss_dssp HHHHHHCSSCCHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHSC
T ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHH
Confidence 3444444433 78899999999988999999999999888874
No 312
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=25.74 E-value=1.6e+02 Score=23.96 Aligned_cols=45 Identities=13% Similarity=0.164 Sum_probs=29.0
Q ss_pred ccCCHHHHHHHHHh-hCCCCCCCHHHHHHHHHH---------HHHHHHHHHHHHH
Q 009666 400 RILTKRSIQELVNQ-IDPSERLDPDVEDILVDI---------AEDFVESITMFGC 444 (529)
Q Consensus 400 rILtKrKLqELVrq-IDPsesLDpDVEELLLeI---------ADDFVDsVvs~AC 444 (529)
..|++..|..+++. +.....-+.+|+++|.++ -+|||.-+...+.
T Consensus 39 G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~~~ 93 (106)
T 2h2k_A 39 DSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGELAK 93 (106)
T ss_dssp TEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHHHH
T ss_pred CEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHH
Confidence 48999999999986 432111136788877765 2478776655433
No 313
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=25.71 E-value=79 Score=25.81 Aligned_cols=67 Identities=3% Similarity=0.135 Sum_probs=33.1
Q ss_pred CHHHHHHHHHhhCCC--CCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcc
Q 009666 403 TKRSIQELVNQIDPS--ERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMT 471 (529)
Q Consensus 403 tKrKLqELVrqIDPs--esLDpD-VEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~ 471 (529)
.+..|.++.+.+|.+ ..|+.+ ..++|. ...+-+..+...++.+-..+...|+..+..-.|.+.++..
T Consensus 121 ~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~~ 190 (191)
T 3khe_A 121 SRERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKICDVK 190 (191)
T ss_dssp CHHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccC
Confidence 344555566666543 344443 222222 1111122223333334445666788888888887766654
No 314
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=25.69 E-value=1.1e+02 Score=24.32 Aligned_cols=19 Identities=11% Similarity=0.391 Sum_probs=10.4
Q ss_pred CcCCccCCHHHHHHHHHhh
Q 009666 396 EFGNRILTKRSIQELVNQI 414 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqI 414 (529)
.+++..|++..|..+++.+
T Consensus 96 ~d~~G~I~~~El~~~l~~~ 114 (159)
T 2ovk_C 96 REGQGLISSAEIRNVLKML 114 (159)
T ss_dssp TTSSSEECHHHHHHHHHHS
T ss_pred CCCCCcCcHHHHHHHHHHh
Confidence 3444555555555555554
No 315
>2vof_A BCL-2-related protein A1; BH3, apoptosis, Pro-surviVal, mitochondrion, protein- complex; 1.8A {Mus musculus} PDB: 2vog_A 2voh_A* 2voi_A 3i1h_A 3mqp_A 2vm6_A
Probab=25.60 E-value=27 Score=31.02 Aligned_cols=29 Identities=28% Similarity=0.273 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHH----------HHHHHHHhhhhc
Q 009666 422 PDVEDILVDIAEDFVES----------ITMFGCSLAKHR 450 (529)
Q Consensus 422 pDVEELLLeIADDFVDs----------Vvs~ACrLAKHR 450 (529)
+.+.+.+..+||++.+| ++.|++.||++-
T Consensus 70 ~~a~~~f~~Va~elF~dg~inWGRIVal~~F~g~la~~~ 108 (157)
T 2vof_A 70 DTARIIFNQVMEKEFEDGIINWGRIVTIFAFGGVLLKKL 108 (157)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 45888999999998776 467999999974
No 316
>2p61_A Hypothetical protein TM_1646; structural genomics, unknown function, PSI-2, protein structure initiative; 2.70A {Thermotoga maritima MSB8} SCOP: a.24.29.1
Probab=25.58 E-value=46 Score=30.33 Aligned_cols=19 Identities=16% Similarity=0.160 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 009666 428 LVDIAEDFVESITMFGCSL 446 (529)
Q Consensus 428 LLeIADDFVDsVvs~ACrL 446 (529)
-.++.-+|++.|+..+.++
T Consensus 79 YK~lVK~FL~~vv~~~~~l 97 (162)
T 2p61_A 79 YKNAIKEFLKLIEKKIYKL 97 (162)
T ss_dssp HHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhhhhh
Confidence 3455555555555555555
No 317
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=25.57 E-value=46 Score=31.55 Aligned_cols=49 Identities=6% Similarity=-0.070 Sum_probs=32.0
Q ss_pred CHHHHHHHHHhhCC--CCCCCHHHHHHHHHHHHHH----HHHHHHHHHHhhhhcC
Q 009666 403 TKRSIQELVNQIDP--SERLDPDVEDILVDIAEDF----VESITMFGCSLAKHRK 451 (529)
Q Consensus 403 tKrKLqELVrqIDP--sesLDpDVEELLLeIADDF----VDsVvs~ACrLAKHRK 451 (529)
+.+...++++.+-. ...++++..+.|.+.++-| |+.++..|+..|-+|.
T Consensus 180 ~~~~r~~il~~~l~~~~~~l~~~~l~~la~~t~G~sgadl~~l~~~A~~~a~r~~ 234 (322)
T 1xwi_A 180 EPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRKV 234 (322)
T ss_dssp CHHHHHHHHHHHHTTCCBCCCHHHHHHHHHTCTTCCHHHHHHHHHHHHTHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 45555566655422 2346777777787777766 7778888887776653
No 318
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=25.49 E-value=1.9e+02 Score=23.84 Aligned_cols=21 Identities=10% Similarity=0.192 Sum_probs=14.8
Q ss_pred CCcCCccCCHHHHHHHHHhhC
Q 009666 395 DEFGNRILTKRSIQELVNQID 415 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqID 415 (529)
+.+++..|++..|..+++.+.
T Consensus 60 D~d~~G~I~~~el~~~l~~~g 80 (150)
T 2jjz_A 60 DLNNEGEIDLMSLKRMMEKLG 80 (150)
T ss_dssp CCCTTSSBCHHHHHHHHHHTT
T ss_pred CCCCcCcCCHHHHHHHHHHcC
Confidence 455666778888887777763
No 319
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=25.26 E-value=1.5e+02 Score=22.71 Aligned_cols=35 Identities=17% Similarity=0.437 Sum_probs=21.3
Q ss_pred cCCc-cCCHHHHHHHHHhhCC-CCCCCHHHHHHHHHH
Q 009666 397 FGNR-ILTKRSIQELVNQIDP-SERLDPDVEDILVDI 431 (529)
Q Consensus 397 ~~nr-ILtKrKLqELVrqIDP-sesLDpDVEELLLeI 431 (529)
++.. .|++..|..+++...+ +..-+.+|++++.++
T Consensus 23 d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~ 59 (92)
T 2kax_A 23 EGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSL 59 (92)
T ss_dssp SSCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHH
T ss_pred CCCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHh
Confidence 4444 7899999999987433 112344566655544
No 320
>1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1
Probab=25.16 E-value=9.5 Score=31.42 Aligned_cols=24 Identities=25% Similarity=0.505 Sum_probs=17.0
Q ss_pred CCCCcchhhHHHHHhhccCcccCC
Q 009666 451 KSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 451 KSdTLEvKDVQLhLERnWNI~IPG 474 (529)
|-|.|++-++...||+.||+.||-
T Consensus 38 G~DSL~~vel~~~lE~~fgi~i~~ 61 (115)
T 1klp_A 38 DIDSLSMVEIAVQTEDKYGVKIPD 61 (115)
T ss_dssp CSHHHHHHHHHHHHHHHTCCCCCH
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCH
Confidence 445566667778888888888763
No 321
>2f05_A Paired amphipathic helix protein SIN3B; helix bundle, transcription repressor; NMR {Mus musculus} SCOP: a.59.1.1
Probab=25.08 E-value=62 Score=27.70 Aligned_cols=73 Identities=14% Similarity=0.161 Sum_probs=37.2
Q ss_pred HHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH----------------HHHHHHHhhhhcCCCCcchhhHHHHHhhccCc
Q 009666 407 IQELVNQIDPSERLDPDVEDILVDIAEDFVES----------------ITMFGCSLAKHRKSDTLEAKDILVHLERNWNM 470 (529)
Q Consensus 407 LqELVrqIDPsesLDpDVEELLLeIADDFVDs----------------Vvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI 470 (529)
-...|++|-..-.=++++.+.+|+|..+|-.. |+.....|=+ +-.-| +.+....|-..+.+
T Consensus 10 A~~YvnkVK~rF~d~p~vY~~FL~IL~~yk~~~~d~~g~~~~~~s~~eV~~~V~~LF~--~hpDL-l~eFn~FLP~~~~~ 86 (105)
T 2f05_A 10 AISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFR--GQEDL-LSEFGQFLPEAKRS 86 (105)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSSSSSSSSCCCCHHHHHHHHHHHTT--TCHHH-HHHHHHHSCGGGC-
T ss_pred HHHHHHHHHHHHccChHHHHHHHHHHHHHHhccccccccccccCcHHHHHHHHHHHHc--cCHHH-HHHHHHHCCCcccc
Confidence 34566666555555999999999999999754 4443333332 22222 45555566666777
Q ss_pred ccCCCCcccccc
Q 009666 471 TLPGFSGDEIKT 482 (529)
Q Consensus 471 ~IPGFssDEIR~ 482 (529)
.+++-+.+....
T Consensus 87 ~~~~~~~~~~~~ 98 (105)
T 2f05_A 87 LFTGNGSCEMNS 98 (105)
T ss_dssp ------------
T ss_pred CCCCchhhhhhh
Confidence 777766654443
No 322
>2gkm_A TRHBN, hemoglobin-like protein HBN, flavohemoglobin; truncated hemoglobin, mutant, oxygen storage/transport complex; HET: HEM; 1.73A {Mycobacterium tuberculosis} PDB: 1idr_A* 1rte_A* 1s56_A* 1s61_A* 2gl3_A* 2gln_A* 2gkn_A*
Probab=25.07 E-value=1.4e+02 Score=25.12 Aligned_cols=80 Identities=13% Similarity=0.122 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCC---CCcccccc-cCCCCCchHHHHH-HHHH
Q 009666 425 EDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPG---FSGDEIKT-FRKPLVCDIHKER-LAAV 499 (529)
Q Consensus 425 EELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPG---FssDEIR~-~RK~~ptEaHKQR-MALI 499 (529)
++.|..|+|+|.+.|...- .|+..-... +.....-+|..-|-..+-| |....++. -.....+++|..| +.++
T Consensus 22 ~~~i~~lv~~FY~~v~~Dp-~l~~~F~~~--d~~~~~~~l~~Fl~~~~GGp~~Y~g~~m~~~H~~~~I~~~~fd~wl~~l 98 (136)
T 2gkm_A 22 HEAIEVVVEDFFVRVLADD-QLSAFFSGT--NMSRLKGKQVEFFAAALGGPEPYTGAPMKQVHQGRGITMHHFSLVAGHL 98 (136)
T ss_dssp HHHHHHHHHHHHHHHHHCT-TTGGGGTTS--CHHHHHHHHHHHHHHHTTCSSCCCSCCHHHHHTTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCH-HHHHhcCCC--CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHcCCCCCHHHHHHHHHHH
Confidence 7889999999999988753 344443321 3444444444444444433 33333321 1233456666655 6678
Q ss_pred HHHHhhhh
Q 009666 500 SFTLDIMC 507 (529)
Q Consensus 500 RKtiK~m~ 507 (529)
++++++..
T Consensus 99 ~~al~e~~ 106 (136)
T 2gkm_A 99 ADALTAAG 106 (136)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhC
Confidence 88888854
No 323
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=25.00 E-value=77 Score=29.61 Aligned_cols=63 Identities=14% Similarity=0.203 Sum_probs=40.3
Q ss_pred CCHHHHHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---CCCCcchhhHHHHH
Q 009666 402 LTKRSIQELVNQID--PSERLDPDVEDILVDIAEDFVESITMFGCSLAKHR---KSDTLEAKDILVHL 464 (529)
Q Consensus 402 LtKrKLqELVrqID--PsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHR---KSdTLEvKDVQLhL 464 (529)
+++..+.+.++++- .+..|++++.+.|.++++-=+..+++..+.++..- +.+.|+..||.-.+
T Consensus 169 l~~~~~~~~l~~~~~~~~~~i~~~~~~~i~~~s~G~~r~~~~~l~~~~~~~~~~~~~~it~~~v~~~~ 236 (340)
T 1sxj_C 169 LPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECC 236 (340)
T ss_dssp CCHHHHHHHHHHHHHTTTCCBCHHHHHHHHHHHTTCHHHHHHHTTTTTTTTCSSSCCCBCHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCcccccccHHHHHHHh
Confidence 45666777666553 45679999999999998765555555555544332 23357777664443
No 324
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=24.94 E-value=1.6e+02 Score=25.07 Aligned_cols=72 Identities=11% Similarity=0.216 Sum_probs=0.0
Q ss_pred CCCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHH---------HHHHHHHH------------HHHHHHhhhhcCC
Q 009666 394 SDEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI---------AEDFVESI------------TMFGCSLAKHRKS 452 (529)
Q Consensus 394 ~~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeI---------ADDFVDsV------------vs~ACrLAKHRKS 452 (529)
.+.+++-.|++..|..+++.+ ....-+.++++++.++ .++|+.-+ +..|+++--.-++
T Consensus 20 ~D~d~dG~I~~~El~~~l~~l-g~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~fD~d~~ 98 (176)
T 2lhi_A 20 FDKDNNGSISSSELATVMRSL-GLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGD 98 (176)
T ss_dssp TCSSCSSCBCHHHHHHHHHHH-TCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHHHHHHHHHHHHCSSCS
T ss_pred HCCCCCCCCCHHHHHHHHHHc-CCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcHHHHHHHHHHhCCCCC
Q ss_pred CCcchhhHHHHHhh
Q 009666 453 DTLEAKDILVHLER 466 (529)
Q Consensus 453 dTLEvKDVQLhLER 466 (529)
..|+..++.-+|..
T Consensus 99 G~I~~~el~~~l~~ 112 (176)
T 2lhi_A 99 GLISAAELKHVLTS 112 (176)
T ss_dssp SSBCHHHHHHHHHT
T ss_pred CcCcHHHHHHHHHH
No 325
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=24.87 E-value=1e+02 Score=25.97 Aligned_cols=20 Identities=5% Similarity=0.013 Sum_probs=11.7
Q ss_pred CCcCCccCCHHHHHHHHHhh
Q 009666 395 DEFGNRILTKRSIQELVNQI 414 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqI 414 (529)
+.+++..|++..|..+++.+
T Consensus 46 D~d~~G~i~~~El~~~l~~~ 65 (208)
T 2hpk_A 46 DLDSDGKMEMDEVLYWPDRM 65 (208)
T ss_dssp CTTCSSEECHHHHTHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHH
Confidence 34455566666666666554
No 326
>2qrw_A Hemoglobin-like protein HBO; truncated hemoglobin fold, alpha helix, heme, hydroxylation, iron, membrane, metal-binding; HET: HEM; 1.93A {Mycobacterium tuberculosis} PDB: 1ngk_A*
Probab=24.77 E-value=1.1e+02 Score=25.39 Aligned_cols=79 Identities=9% Similarity=0.001 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCCCCcc-------cccc-cCCCCCchHHHHH-
Q 009666 425 EDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFSGD-------EIKT-FRKPLVCDIHKER- 495 (529)
Q Consensus 425 EELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFssD-------EIR~-~RK~~ptEaHKQR- 495 (529)
|+.|..|+|+|.+.|...-.--..+.+. +.....-.|..-|-..+-|-... .++. -.....+++|..|
T Consensus 12 ~~~i~~lv~~FY~~v~~dp~l~~~F~~~---d~~~~~~~l~~fl~~~~GGp~~Y~~~~G~p~m~~~H~~~~I~~~~f~~w 88 (128)
T 2qrw_A 12 AKTFDAIVSRFYAQVAEDEVLRRVYPED---DLAGAEERLRMFLEQYWGGPRTYSEQRGHPRLRMRHAPFRISLIERDAF 88 (128)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHSCCS---CCHHHHHHHHHHHHHHTTSCCHHHHHHCSCCHHHHHTTSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHhccCC---CHHHHHHHHHHHHHHHhCCCcccccCcCChhHHHhhcCCCcCHHHHHHH
Confidence 6778899999999988865433333322 34444444555555555443321 1211 1223456666665
Q ss_pred HHHHHHHH---hhh
Q 009666 496 LAAVSFTL---DIM 506 (529)
Q Consensus 496 MALIRKti---K~m 506 (529)
+++++++| ++.
T Consensus 89 l~~~~~al~~~~e~ 102 (128)
T 2qrw_A 89 LRCMHTAVASIDSE 102 (128)
T ss_dssp HHHHHHHHHTSCTT
T ss_pred HHHHHHHHhHHHHc
Confidence 56788888 654
No 327
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=24.72 E-value=2.6e+02 Score=22.06 Aligned_cols=21 Identities=19% Similarity=0.330 Sum_probs=15.5
Q ss_pred CCcCCccCCHHHHHHHHHhhC
Q 009666 395 DEFGNRILTKRSIQELVNQID 415 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqID 415 (529)
+.+++..|++..|..+++.++
T Consensus 28 D~d~~G~i~~~el~~~l~~~g 48 (156)
T 1wdc_B 28 DVDRDGFVSKEDIKAISEQLG 48 (156)
T ss_dssp CTTCSSSCCHHHHHHHHHHHS
T ss_pred CCCCCCcCcHHHHHHHHHHhC
Confidence 445667788888888888774
No 328
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=24.69 E-value=2e+02 Score=30.84 Aligned_cols=111 Identities=14% Similarity=0.112 Sum_probs=55.6
Q ss_pred CccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHH-------------------------HHHHHHHHHHHhhhhcCCC
Q 009666 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAED-------------------------FVESITMFGCSLAKHRKSD 453 (529)
Q Consensus 399 nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADD-------------------------FVDsVvs~ACrLAKHRKSd 453 (529)
..-|.|..+.+|++.+.....++++.+.++.+|.+. .+|.++....+ .
T Consensus 506 l~~l~K~eVr~lar~l~~~~~~~~~~~~ip~~i~~k~Ps~eL~p~~~~~~q~de~~lg~Y~~~D~~L~~~~~----~--- 578 (680)
T 3sdb_A 506 NAGVPKTLIQHLIRWVISAGEFGEKVGEVLQSVLDTEITPELIPTGEEELQSSEAKVGPFALQDFSLFQVLR----Y--- 578 (680)
T ss_dssp TTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHC-------------CHHHHCCHHHHHHHHHHHHH----H---
T ss_pred cCCCcHHHHHHHHHHHHhhccccccccCchHHHhcCCCCcCcCCCCCCCCCCchhhcCCHHHHHHHHHHHHH----C---
Confidence 345789999999998844344555544444333321 12222222211 1
Q ss_pred CcchhhHHHHHhhccCcccCCCCcccccccCCCCCchHHHHHHHHHHHHHhhhhhheeeecceee
Q 009666 454 TLEAKDILVHLERNWNMTLPGFSGDEIKTFRKPLVCDIHKERLAAVSFTLDIMCLLVIYKDACLS 518 (529)
Q Consensus 454 TLEvKDVQLhLERnWNI~IPGFssDEIR~~RK~~ptEaHKQRMALIRKtiK~m~~~~~~~~~~~~ 518 (529)
-+...+|.+-++.-|+-...|.-.+.++-+++..-+++ +-...++|-++++--.--||..|+-
T Consensus 579 ~~~~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~y~~~--~i~~~~~~f~~rf~~~~qfKr~~~p 641 (680)
T 3sdb_A 579 GFRPSKIAFLAWHAWNDAERGNWPPGFPKSERPSYSLA--EIRHWLQIFVQRFYSFSQFKRSALP 641 (680)
T ss_dssp CCCHHHHHHHHHHHHSCTTSSCCCSSCCGGGCCCCCHH--HHHHHHHHHHHHHHTTSHHHHTTCC
T ss_pred CCCHHHHHHHHHHHhccccccccccccchhhhcCCCHH--HHHHHHHHHHHHHhhhccCCcccCC
Confidence 23567776656666764444443444444444332221 2222344444444444567888873
No 329
>2z15_A Protein TOB1; human TOB1 protein, phosphorylation, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.30A {Homo sapiens} SCOP: d.370.1.1 PDB: 2d5r_B
Probab=24.59 E-value=13 Score=33.07 Aligned_cols=35 Identities=14% Similarity=0.214 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCccc-CC
Q 009666 434 DFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTL-PG 474 (529)
Q Consensus 434 DFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~I-PG 474 (529)
+-+|-++..||+.+- |+..|+.-.|-++|-||| ||
T Consensus 69 ~~~Dp~i~~Aa~~sG------l~~~dl~~~LP~eltlWvDPg 104 (130)
T 2z15_A 69 EKVDPVIEQASKESG------LDIDDVRGNLPQDLSVWIDPF 104 (130)
T ss_dssp SSBCHHHHHHHHTTT------CCHHHHHHHSCTTEEEEEETT
T ss_pred CCCCHHHHHHHHHhC------CCHHHHHHhCCccCEEEECCC
Confidence 335567788887543 788999888999999998 55
No 330
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=24.53 E-value=30 Score=32.57 Aligned_cols=32 Identities=19% Similarity=0.123 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 433 EDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 433 DDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
.+++..++...+++|+..+.+ ++...+...|+
T Consensus 215 ~~l~~~~~~E~~~va~a~G~~-l~~~~~~~~~~ 246 (320)
T 3i83_A 215 EGFVRAIMQEIRAVAAANGHP-LPEDIVEKNVA 246 (320)
T ss_dssp HHHHHHHHHHHHHHHHHTTCC-CCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCC-CChHHHHHHHH
Confidence 455666667777777777665 44333444444
No 331
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=24.49 E-value=1.1e+02 Score=23.62 Aligned_cols=62 Identities=2% Similarity=0.069 Sum_probs=28.3
Q ss_pred HHHHHHHHHhhCCC--CCCCHH-HHHHHHH-HHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 404 KRSIQELVNQIDPS--ERLDPD-VEDILVD-IAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 404 KrKLqELVrqIDPs--esLDpD-VEELLLe-IADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
...|.++.+.+|.+ ..|+.+ ..++|.. +...+-+..+...++.+-..+...|+..+..-.|.
T Consensus 87 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 87 VKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 34555555555532 244433 3334433 21122222333333334444566777777755544
No 332
>1j1j_A Translin; testis/brain RNA binding protein, ssDNA binding protein, RNA protein, DNA binding protein; 2.20A {Homo sapiens} SCOP: a.118.16.1 PDB: 3qb5_A 3pja_A 1key_A
Probab=24.45 E-value=1.4e+02 Score=28.41 Aligned_cols=100 Identities=14% Similarity=0.215 Sum_probs=59.3
Q ss_pred CCccCCHHHHHHHHH-hhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCCCC
Q 009666 398 GNRILTKRSIQELVN-QIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPGFS 476 (529)
Q Consensus 398 ~nrILtKrKLqELVr-qIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPGFs 476 (529)
++.+++...|.+.+. .++....+-=+.||.|+.|+| ++..+..+|.........+ +...|.-.++.-|..-. .|
T Consensus 122 ~~~L~t~eev~~~L~~~~~~~~~f~v~~edYLlGL~D-ltGEL~R~avn~v~~Gd~~--~~~~i~~fm~~Ly~~f~-~L- 196 (240)
T 1j1j_A 122 TETLVTREAVTEILGIEPDREKGFHLDVEDYLSGVLI-LASELSRLSVNSVTAGDYS--RPLHISTFINELDSGFR-LL- 196 (240)
T ss_dssp HSSCCCHHHHHHHHTCCCSSSSSSCCCHHHHHHHHHH-HHHHHHHHHHHHHHTTCSS--HHHHHHHHHHHHHHHHT-TC-
T ss_pred CCCCCCHHHHHHHhCCCccccccCcCCHHHHHHHHHH-HHHHHHHHHHHHHhcCChH--hHHHHHHHHHHHHHHHH-hc-
Confidence 457888888887774 112233445567888988886 5666666555554443333 34555455555444210 01
Q ss_pred cccccccCCCCCchHHHHHHHHHHHHHhhhhhheee
Q 009666 477 GDEIKTFRKPLVCDIHKERLAAVSFTLDIMCLLVIY 512 (529)
Q Consensus 477 sDEIR~~RK~~ptEaHKQRMALIRKtiK~m~~~~~~ 512 (529)
+ .+++.-++|+..+|-.|++. .-|+|
T Consensus 197 --n-------l~n~~LRkK~D~lk~~vkKv-E~v~Y 222 (240)
T 1j1j_A 197 --N-------LKNDSLRKRYDGLKYDVKKV-EEVVY 222 (240)
T ss_dssp --C-------CCCHHHHHHHTTHHHHHHHH-HHHHH
T ss_pred --C-------CCCcchHHHHHHHHHHHHHH-HHHHH
Confidence 0 12367889999999999987 33444
No 333
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=24.19 E-value=86 Score=24.90 Aligned_cols=18 Identities=17% Similarity=0.311 Sum_probs=9.5
Q ss_pred cCCccCCHHHHHHHHHhh
Q 009666 397 FGNRILTKRSIQELVNQI 414 (529)
Q Consensus 397 ~~nrILtKrKLqELVrqI 414 (529)
+++..|++..|..+++.+
T Consensus 99 d~~G~I~~~el~~~l~~~ 116 (156)
T 1wdc_B 99 QETKKLNIEYIKDLLENM 116 (156)
T ss_dssp TCCSCEEHHHHHHHHHHS
T ss_pred CCCCccCHHHHHHHHHHh
Confidence 444455555555555554
No 334
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=24.16 E-value=1e+02 Score=26.65 Aligned_cols=35 Identities=14% Similarity=0.116 Sum_probs=18.9
Q ss_pred CCcCCccCCHHHHHHHHHh-hCCCCCCCHHHHHHHHH
Q 009666 395 DEFGNRILTKRSIQELVNQ-IDPSERLDPDVEDILVD 430 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrq-IDPsesLDpDVEELLLe 430 (529)
+.+++..|++..|..+++. ++. ..-+.++++++.+
T Consensus 58 D~d~dG~I~~~El~~~l~~~lg~-~~~~~~~~~~~~~ 93 (219)
T 3cs1_A 58 DKNETGKLCYDEVYSGCLEVLKL-DEFTSRVRDITKR 93 (219)
T ss_dssp CTTCSSCBCHHHHHHHHHHTTCG-GGTCSCHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHHhCC-CccHHHHHHHHHH
Confidence 3456667777777777766 332 1223445554443
No 335
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=24.13 E-value=1.2e+02 Score=30.85 Aligned_cols=40 Identities=20% Similarity=0.439 Sum_probs=25.8
Q ss_pred HHHHHHHHHhhCCCCCCCH--------HHHHHHH------HHHHHHHHHHHHHH
Q 009666 404 KRSIQELVNQIDPSERLDP--------DVEDILV------DIAEDFVESITMFG 443 (529)
Q Consensus 404 KrKLqELVrqIDPsesLDp--------DVEELLL------eIADDFVDsVvs~A 443 (529)
+++|...++.+-...+||+ |++++|+ +++++||++|-+.+
T Consensus 6 ~~~l~~~~~~l~~~~~~~e~~~~~~l~e~~~~Ll~adv~~~~~~~~~~~v~~~~ 59 (425)
T 2ffh_A 6 SARLQEAIGRLRGRGRITEEDLKATLREIRRALMDADVNLEVTRDFVERVREEA 59 (425)
T ss_dssp HHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 3567777777766677775 3445554 56778888776554
No 336
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=24.12 E-value=1.6e+02 Score=26.85 Aligned_cols=37 Identities=8% Similarity=0.294 Sum_probs=24.9
Q ss_pred ccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH
Q 009666 400 RILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVES 438 (529)
Q Consensus 400 rILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDs 438 (529)
.|-+|+-|++|++-+.. .-+.+|.+-+|+|.+++.+.
T Consensus 80 eva~~~fl~~l~~l~~~--~~~~~Vk~kil~li~~W~~~ 116 (220)
T 1dvp_A 80 EVFTKENCEMFSSFLES--TPHENVRQKMLELVQTWAYA 116 (220)
T ss_dssp HHSSHHHHHHHHHHHHH--CSCHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHHHH
Confidence 34567777777766543 34677888888887777764
No 337
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=24.10 E-value=1.4e+02 Score=25.19 Aligned_cols=15 Identities=0% Similarity=0.153 Sum_probs=7.9
Q ss_pred cCCCCcchhhHHHHH
Q 009666 450 RKSDTLEAKDILVHL 464 (529)
Q Consensus 450 RKSdTLEvKDVQLhL 464 (529)
.+...|+..+..-.|
T Consensus 175 d~dG~Is~~EF~~~~ 189 (191)
T 3k21_A 175 NNDGKIDFHEFSEMM 189 (191)
T ss_dssp SSSSSBCHHHHHHHH
T ss_pred CCCCeECHHHHHHHH
Confidence 345556666654443
No 338
>2odi_A R.BCNI; endonuclease-DNA complex, restriction enzyme, hydrolas complex; HET: MSE; 1.45A {Brevibacillus centrosporus} PDB: 2odh_A* 2q10_A* 3imb_A
Probab=23.93 E-value=39 Score=32.75 Aligned_cols=72 Identities=21% Similarity=0.186 Sum_probs=42.8
Q ss_pred hcCCCCcchhhHHHHHhhccCcc-----cCCCCcccccccC-CCCC---chHHHH--HHHHHHHHHhhhhhheeeec---
Q 009666 449 HRKSDTLEAKDILVHLERNWNMT-----LPGFSGDEIKTFR-KPLV---CDIHKE--RLAAVSFTLDIMCLLVIYKD--- 514 (529)
Q Consensus 449 HRKSdTLEvKDVQLhLERnWNI~-----IPGFssDEIR~~R-K~~p---tEaHKQ--RMALIRKtiK~m~~~~~~~~--- 514 (529)
+|..++ +|=..||...||. .|-|..=|||..| +... |=-|++ ..+..+.-+.+.. |.|
T Consensus 29 ~r~~~~----gvG~TLE~lLGI~eNn~~~PD~~giELKa~r~~~~~s~~TLFt~~P~p~~~~~~~~~kyG----y~~~~g 100 (238)
T 2odi_A 29 FRTDDG----VVGQILERQFGVQENNITLGDLGEFELKGMRNRKAKSNLTLFHKKPVAGQTVIQIFNRFG----YVKPSS 100 (238)
T ss_dssp CSSCTT----HHHHHHHHHTTCCSCCSSSBTTBSSEEEEEECCSSCCCEEEEECCCSEESCHHHHHHHHC----EEEECS
T ss_pred ccCCCC----cHHHHHHHHhCCCccCCCCCCcccEEEEEeccCCCCcceeeeccCCCccccHHHHHHHcC----CCcccc
Confidence 666665 6888888888765 6888888999877 3211 000000 1111333333333 543
Q ss_pred -----ceeeEeeeeeccCC
Q 009666 515 -----ACLSVHFTYHCAGL 528 (529)
Q Consensus 515 -----~~~~~~~~~~~~~~ 528 (529)
.+.+.|.|+||.-.
T Consensus 101 ~~~~~~~~~l~~Ti~~~~~ 119 (238)
T 2odi_A 101 RNPEVMKKKLFTTIKGGRL 119 (238)
T ss_dssp SCTTSEEEEEEEEEEBTSC
T ss_pred ccCCCccceEEEEeECCCC
Confidence 48999999998743
No 339
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=23.91 E-value=1.1e+02 Score=24.52 Aligned_cols=18 Identities=11% Similarity=0.196 Sum_probs=11.0
Q ss_pred cCCCCcchhhHHHHHhhc
Q 009666 450 RKSDTLEAKDILVHLERN 467 (529)
Q Consensus 450 RKSdTLEvKDVQLhLERn 467 (529)
.+...|+..+..-.|.+.
T Consensus 143 d~dg~I~~~eF~~~~~~~ 160 (166)
T 2mys_B 143 DVAGNVDYKNICYVITHG 160 (166)
T ss_pred CCCCeEeHHHHHHHHHhc
Confidence 445567777776666554
No 340
>1squ_A CHEX protein; alpha-beta sandwich, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.40A {Thermotoga maritima} SCOP: d.252.1.1 PDB: 1xko_A
Probab=23.89 E-value=1.6e+02 Score=24.68 Aligned_cols=44 Identities=9% Similarity=0.074 Sum_probs=31.3
Q ss_pred CccCCHHHHHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 009666 399 NRILTKRSIQELVNQI---DPSERLDPDVEDILVDIAEDFVESITMF 442 (529)
Q Consensus 399 nrILtKrKLqELVrqI---DPsesLDpDVEELLLeIADDFVDsVvs~ 442 (529)
--+++++...+|++.+ +....+|+++.++|.|+++-.+...++.
T Consensus 57 ~l~~~~~~a~~i~~~mlgG~~~~e~~e~~~sal~Ei~Nii~g~~~~~ 103 (155)
T 1squ_A 57 IYSFSSETALKVVSAMMGGMEYNQLDELALSAIGELGNMTAGKLAMK 103 (155)
T ss_dssp EEEECHHHHHHHHHHHTTTCCCCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHHHhCCCCccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 3345888888888876 2334688999999999887666555543
No 341
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=23.83 E-value=1.2e+02 Score=26.31 Aligned_cols=19 Identities=16% Similarity=0.263 Sum_probs=12.1
Q ss_pred chhhHHHHHhhccCcccCC
Q 009666 456 EAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 456 EvKDVQLhLERnWNI~IPG 474 (529)
+||+-.+.|=..|...+.+
T Consensus 100 ~Vk~kil~li~~W~~~f~~ 118 (140)
T 3ldz_A 100 KVCEKLKALMVEWTDEFKN 118 (140)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhCC
Confidence 5666666666677766543
No 342
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=23.76 E-value=57 Score=27.29 Aligned_cols=37 Identities=14% Similarity=0.238 Sum_probs=22.6
Q ss_pred CCCcCCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHH
Q 009666 394 SDEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIA 432 (529)
Q Consensus 394 ~~e~~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIA 432 (529)
.+.+++..|++..|..+++.++ ..|+++-.+.|+..+
T Consensus 94 fD~d~~G~I~~~el~~~l~~~g--~~ls~~ei~~~~~~~ 130 (153)
T 3i5g_B 94 FDEDGQGFIPEDYLKDLLENMG--DNFSKEEIKNVWKDA 130 (153)
T ss_dssp TCSSCSSCCCHHHHHHHHHSSS--SCCCHHHHHHHHTTC
T ss_pred cccCCCCeEeHHHHHHHHHHcC--CcCCHHHHHHHHHHh
Confidence 3456777788888888888763 456555333333333
No 343
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=23.76 E-value=2e+02 Score=22.74 Aligned_cols=46 Identities=30% Similarity=0.464 Sum_probs=26.5
Q ss_pred cCCc-cCCHHHHHHHHHhhCC---CCCCCHH-HHHHHHHH---------HHHHHHHHHHH
Q 009666 397 FGNR-ILTKRSIQELVNQIDP---SERLDPD-VEDILVDI---------AEDFVESITMF 442 (529)
Q Consensus 397 ~~nr-ILtKrKLqELVrqIDP---sesLDpD-VEELLLeI---------ADDFVDsVvs~ 442 (529)
+++. .|++..|.++++..-+ +..++++ |+++|.++ -+|||.-+...
T Consensus 23 dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 23 EGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp SSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred CCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 3443 7899999999986321 2345544 55555443 24677655443
No 344
>2ipc_A Preprotein translocase SECA subunit; nucleotide binding fold, ATPase, parallel dimer; 2.80A {Thermus thermophilus}
Probab=23.49 E-value=50 Score=37.99 Aligned_cols=48 Identities=10% Similarity=0.086 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcc
Q 009666 422 PDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMT 471 (529)
Q Consensus 422 pDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~ 471 (529)
+++.|.+.+|.+|.|++++...+.-- ...+..+++.+.-.|...|++.
T Consensus 779 ~~~~~~i~~~~~~~i~~~v~~~~~~~--~~~~~w~~~~l~~~~~~~~~~~ 826 (997)
T 2ipc_A 779 EEVKEAAIGMVEETVASLAENFLNPE--VHPEDWDLEGLKATLLDTAPQL 826 (997)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCS--SCSSSCCHHHHHHHHHHSSCCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCCc--CChhhcCHHHHHHHHHHhcCcc
Confidence 57778888888888888886443211 1223456777877888887654
No 345
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=23.22 E-value=2.1e+02 Score=25.11 Aligned_cols=34 Identities=12% Similarity=0.162 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhcc
Q 009666 435 FVESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (529)
Q Consensus 435 FVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (529)
..+..+..+.++.-..+...|+..++.-.|+..+
T Consensus 135 ~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~ 168 (229)
T 3dd4_A 135 TVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIY 168 (229)
T ss_dssp CHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHH
Confidence 3345556666666666777788888877777654
No 346
>3i9v_4 NADH-quinone oxidoreductase subunit 4; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_4* 2fug_4* 3iam_4* 3ias_4* 3m9s_4*
Probab=23.18 E-value=1.7e+02 Score=30.04 Aligned_cols=100 Identities=15% Similarity=0.168 Sum_probs=53.9
Q ss_pred CHHHHHHHHHhhCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHHH-------HHhhhhcCCCCcchhhHHH
Q 009666 403 TKRSIQELVNQIDP-------------SERLDPDVEDILVDIAEDFVESITMFG-------CSLAKHRKSDTLEAKDILV 462 (529)
Q Consensus 403 tKrKLqELVrqIDP-------------sesLDpDVEELLLeIADDFVDsVvs~A-------CrLAKHRKSdTLEvKDVQL 462 (529)
-|+++.+|+..+.+ ...|+++..+.|+++.|+|-..+-+.. .-.++-++--.|+.+|..
T Consensus 152 ~RE~~~~i~e~~~G~R~h~~~~~pGGv~~dl~~~~~~~i~~~l~~~~~~~~e~~~l~~~n~i~~~R~~gvGvl~~e~A~- 230 (409)
T 3i9v_4 152 ERETILDLFEWVTGQRFHHNYIRIGGVKEDLPEEFVPELKKLLEVLPHRIDEYEALFAESPIFYERARGVGVIPPEVAI- 230 (409)
T ss_dssp HHHHHHHHHHHHHSSSSSCCCBCSSBBSSCCCTTHHHHHHHHHHHHHHHHHHHHHHHHSCTTHHHHHSSSSCBCHHHHH-
T ss_pred HHHHHHHHHHHHcCCccccCceeeCCeecCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhChHHHhhcCCccccCHHHHH-
Confidence 36777888887743 234667766666666665544433332 334556666677666652
Q ss_pred HHhhccCcccC-----CCCcc---------------cccccCCCCCchHHHHHHHHHHHHHhhhh
Q 009666 463 HLERNWNMTLP-----GFSGD---------------EIKTFRKPLVCDIHKERLAAVSFTLDIMC 507 (529)
Q Consensus 463 hLERnWNI~IP-----GFssD---------------EIR~~RK~~ptEaHKQRMALIRKtiK~m~ 507 (529)
+||..=| |+.-| ++....+-..-+-+.-|+..|+.+++.+-
T Consensus 231 ----~~g~tGp~~RaSGv~~D~R~~~PY~~Y~~~~f~v~~~~~GD~~aR~~VR~~E~~qSl~ii~ 291 (409)
T 3i9v_4 231 ----DLGLTGGSLRASGVNYDVRKAYPYSGYETYTFDVPLGERGDVFDRMLVRIREMRESVKIIK 291 (409)
T ss_dssp ----HHTCCSSSSGGGTCCCCHHHHSCCSSGGGSCCCCCCCSSBCHHHHHHHHHHHHHHHHHHHH
T ss_pred ----HhCCcCcccccCCCccchhhcCcchhhccCCCCCccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2443311 11111 11111222233568888888888877663
No 347
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=23.12 E-value=1.3e+02 Score=25.28 Aligned_cols=21 Identities=24% Similarity=0.469 Sum_probs=14.6
Q ss_pred hcCCCCcchhhHHHHHhhccC
Q 009666 449 HRKSDTLEAKDILVHLERNWN 469 (529)
Q Consensus 449 HRKSdTLEvKDVQLhLERnWN 469 (529)
..+...|+..+..-.+.+.|+
T Consensus 173 ~d~dG~I~~~EF~~~~~~~~~ 193 (208)
T 2hpk_A 173 TDKSGKLERTELVHLFRKFWM 193 (208)
T ss_dssp TTCCSSBCHHHHHHHHHHHHC
T ss_pred CCCCCcCcHHHHHHHHHHHhc
Confidence 345667888888777776654
No 348
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=23.09 E-value=62 Score=24.99 Aligned_cols=21 Identities=5% Similarity=0.037 Sum_probs=12.8
Q ss_pred hhhcCCCCcchhhHHHHHhhc
Q 009666 447 AKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 447 AKHRKSdTLEvKDVQLhLERn 467 (529)
+-..+...|+..+..-.|.+.
T Consensus 121 ~d~~~dg~i~~~eF~~~~~~~ 141 (145)
T 2bl0_B 121 VSVSGDGAINYESFVDMLVTG 141 (145)
T ss_dssp CCCCTTSEEEHHHHHHHHHHS
T ss_pred cCCCCCCcEeHHHHHHHHHhc
Confidence 333455667777776666654
No 349
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=23.06 E-value=1.4e+02 Score=23.29 Aligned_cols=20 Identities=20% Similarity=0.288 Sum_probs=12.5
Q ss_pred CCcCCccCCHHHHHHHHHhh
Q 009666 395 DEFGNRILTKRSIQELVNQI 414 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqI 414 (529)
+.+++..|++..|..+++.+
T Consensus 94 D~d~~G~I~~~el~~~l~~~ 113 (146)
T 2qac_A 94 DNNCTGYLTKSQMKNILTTW 113 (146)
T ss_dssp CTTCSSEEEHHHHHHHHHHS
T ss_pred CCCCCCCCCHHHHHHHHHHh
Confidence 34455566777777777665
No 350
>2ksc_A Cyanoglobin; hemeprotein, 2/2 hemoglobin, GLBN, TRHBN, unknown function; HET: HEB; NMR {Synechococcus SP}
Probab=22.97 E-value=1.3e+02 Score=24.77 Aligned_cols=80 Identities=13% Similarity=0.167 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCC---CCcccccc-cCCC----CCchHHHHH-
Q 009666 425 EDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPG---FSGDEIKT-FRKP----LVCDIHKER- 495 (529)
Q Consensus 425 EELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPG---FssDEIR~-~RK~----~ptEaHKQR- 495 (529)
++.|..|+|+|.+.|...- .|+...... +.....-.|..-|-..+-| |....++. -+.. ..+++|..|
T Consensus 10 ~~~i~~lv~~FY~~v~~Dp-~l~~~F~~~--d~~~~~~~l~~Fl~~~~GGp~~Y~g~~m~~~H~~~~~~~~I~~~~fd~w 86 (123)
T 2ksc_A 10 AAAVDLAVEKFYGKVLADE-RVNRFFVNT--DMAKQKQHQKDFMTYAFGGTDRFPGRSMRAAHQDLVENAGLTDVHFDAI 86 (123)
T ss_dssp SHHHHHHHHHHHHHHHHCH-HHHTGGGSS--CHHHHHHHHHHHHHHHTTCTTSCCSTHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCH-HHHHhcCCC--CHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHhhcccCCcCHHHHHHH
Confidence 4678899999999987743 455544422 3444444444444444433 22322331 1112 355555544
Q ss_pred HHHHHHHHhhhh
Q 009666 496 LAAVSFTLDIMC 507 (529)
Q Consensus 496 MALIRKtiK~m~ 507 (529)
|.+++++|++..
T Consensus 87 l~~~~~al~e~~ 98 (123)
T 2ksc_A 87 AENLVLTLQELN 98 (123)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 677888888764
No 351
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=22.84 E-value=67 Score=32.25 Aligned_cols=73 Identities=12% Similarity=0.072 Sum_probs=52.9
Q ss_pred HHHHHHHHHhhCCCCCCCHHH-----------HHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc--chhhHHHHHhhccCc
Q 009666 404 KRSIQELVNQIDPSERLDPDV-----------EDILVDIAEDFVESITMFGCSLAKHRKSDTL--EAKDILVHLERNWNM 470 (529)
Q Consensus 404 KrKLqELVrqIDPsesLDpDV-----------EELLLeIADDFVDsVvs~ACrLAKHRKSdTL--EvKDVQLhLERnWNI 470 (529)
..-|++|.+.+|-...||.|. ++ -.+.+|+.|-.++.....+-+.-+.-.+ |+.||+-.|.. -++
T Consensus 158 ~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~-af~~~N~ll~~~v~~it~~ir~pG~iNv~~D~~dv~t~L~~-~g~ 235 (353)
T 1w5f_A 158 IEGLKKLRKHVDTLIKISNNKLMEELPRDVKIKD-AFLKADETLHQGVKGISELITKRGYIRLTSRFARIESVMKD-AGA 235 (353)
T ss_dssp HHHHHHHHHTCSEEEEEEHHHHHTTSCTTCCHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHTT-CEE
T ss_pred HHHHHHHHhhCCEEEEEecHHHHhhhcccCCHHH-HHHHHHHHHHHHhcCchhhccCCcccccccCHHHHHHhccC-CCe
Confidence 344778888888765555553 22 2566777777777777777777788889 99999999987 677
Q ss_pred ccCCCCcc
Q 009666 471 TLPGFSGD 478 (529)
Q Consensus 471 ~IPGFssD 478 (529)
.+.|++..
T Consensus 236 a~~g~g~a 243 (353)
T 1w5f_A 236 AILGIGVG 243 (353)
T ss_dssp EEEEEEEE
T ss_pred eEEEEeec
Confidence 78887653
No 352
>2ck3_A ATP synthase subunit alpha\, mitochondrial; hydrolase; HET: ANP ADP; 1.9A {Bos taurus} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1bmf_A* 1e1q_A* 1e1r_A* 1e79_A* 1h8h_A* 1nbm_A* 1ohh_A* 1qo1_A 1w0j_A* 1w0k_A* 1h8e_A* 2jdi_A* 2wss_A* 2w6j_A 2w6e_A 2w6g_A 2w6f_A 2w6h_A 2w6i_A 1cow_A* ...
Probab=22.80 E-value=48 Score=35.19 Aligned_cols=31 Identities=19% Similarity=0.451 Sum_probs=26.4
Q ss_pred HHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH
Q 009666 408 QELVNQIDPSERLDPDVEDILVDIAEDFVES 438 (529)
Q Consensus 408 qELVrqIDPsesLDpDVEELLLeIADDFVDs 438 (529)
.+++++|+.+..||+|.++.|.++.++|.+.
T Consensus 477 ~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~ 507 (510)
T 2ck3_A 477 QALLGKIRTDGKISEESDAKLKEIVTNFLAG 507 (510)
T ss_dssp HHHHHHHHHSSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 3677777778899999999999999999764
No 353
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=22.76 E-value=1.1e+02 Score=24.42 Aligned_cols=18 Identities=0% Similarity=0.353 Sum_probs=10.4
Q ss_pred hcCCCCcchhhHHHHHhh
Q 009666 449 HRKSDTLEAKDILVHLER 466 (529)
Q Consensus 449 HRKSdTLEvKDVQLhLER 466 (529)
..+...|+..+..-.|.+
T Consensus 148 ~~~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 148 RNDDNEIDEDEFIRIMKK 165 (169)
T ss_dssp CSSSSCBCHHHHHHHHC-
T ss_pred CCCCCCEeHHHHHHHHHh
Confidence 345556777777655554
No 354
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=22.73 E-value=1e+02 Score=26.77 Aligned_cols=45 Identities=27% Similarity=0.346 Sum_probs=36.8
Q ss_pred HHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 009666 406 SIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHR 450 (529)
Q Consensus 406 KLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHR 450 (529)
.|+.|+.+-+++.-++.|+.+++.+=-++|...|-+...+.|+.|
T Consensus 109 ~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~~ 153 (155)
T 1wzv_A 109 ALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVDR 153 (155)
T ss_dssp HHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEEC
T ss_pred HHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 345566655777889999999999888899999999988888865
No 355
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=22.55 E-value=99 Score=25.93 Aligned_cols=34 Identities=15% Similarity=0.108 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 434 DFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 434 DFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+-|+.++...++.+-..+...|+..+..-.|.+.
T Consensus 151 ~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~ 184 (202)
T 2bec_A 151 EQLENIADRTVQEADEDGDGAVSFVEFTKSLEKM 184 (202)
T ss_dssp HHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTTS
T ss_pred HHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHh
Confidence 3344444444444555567788888887666654
No 356
>3jvo_A GP6; 13-membered ring, viral protein; HET: MSE; 2.10A {Enterobacteria phage HK97}
Probab=22.50 E-value=1.1e+02 Score=25.87 Aligned_cols=40 Identities=5% Similarity=0.083 Sum_probs=30.4
Q ss_pred ccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 009666 400 RILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMF 442 (529)
Q Consensus 400 rILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ 442 (529)
.+++-..++.-+| ||.. -||+..+.|++-|.++|++.+..
T Consensus 7 ~~vtLee~K~~LR-id~d--~dD~li~~li~AA~~~~~~~~~~ 46 (108)
T 3jvo_A 7 DVISLSLFKQQIE-FEED--DRDELITLYAQAAFDYCMRWCDE 46 (108)
T ss_dssp GTSCHHHHHHHTT-CCCS--TTHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCHHHHHHHcc-CCCC--ccHHHHHHHHHHHHHHHHHHhCC
Confidence 4667666666666 6665 48889999999999999888764
No 357
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=22.42 E-value=1.2e+02 Score=24.64 Aligned_cols=23 Identities=13% Similarity=0.286 Sum_probs=15.7
Q ss_pred hhhhcCCCCcchhhHHHHHhhcc
Q 009666 446 LAKHRKSDTLEAKDILVHLERNW 468 (529)
Q Consensus 446 LAKHRKSdTLEvKDVQLhLERnW 468 (529)
.+-..+...|+..+..-.+...|
T Consensus 153 ~~D~d~dG~i~~~eF~~~~~~~~ 175 (191)
T 1uhk_A 153 VCDIDESGQLDVDEMTRQHLGFW 175 (191)
T ss_dssp HSCCCTTSCEEHHHHHHHHHHHH
T ss_pred HhCCCCCCcCcHHHHHHHHHHHh
Confidence 33344566788888877777766
No 358
>2vso_E Eukaryotic initiation factor 4F subunit P150; acetylation, ATP-binding, phosphoprotein, protein biosynthesis, translation regulation; HET: AMP; 2.6A {Saccharomyces cerevisiae} PDB: 2vsx_E*
Probab=22.35 E-value=1.4e+02 Score=28.42 Aligned_cols=24 Identities=29% Similarity=0.512 Sum_probs=16.6
Q ss_pred HHHHHHHHHhhCCCCCCCHHHHHHH
Q 009666 404 KRSIQELVNQIDPSERLDPDVEDIL 428 (529)
Q Consensus 404 KrKLqELVrqIDPsesLDpDVEELL 428 (529)
+|++..+|+++.+ +.||.-+.+++
T Consensus 37 ~r~vkgiLNKLT~-~nf~~i~~ql~ 60 (284)
T 2vso_E 37 ERKMKSLLNKLTL-EMFDAISSEIL 60 (284)
T ss_dssp HHHHHHHHHSCCS-TTHHHHHHHHH
T ss_pred HHHHHHHHhhCCH-HHHHHHHHHHH
Confidence 7888899999875 35555555543
No 359
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=22.29 E-value=1.3e+02 Score=24.16 Aligned_cols=72 Identities=10% Similarity=0.159 Sum_probs=37.7
Q ss_pred CCCcCCccCCHHHHHHHHHhhCCCCCCCH-HHHHHHHHH-----HHHHHHHH------------HHHHHHhhhhcCCCCc
Q 009666 394 SDEFGNRILTKRSIQELVNQIDPSERLDP-DVEDILVDI-----AEDFVESI------------TMFGCSLAKHRKSDTL 455 (529)
Q Consensus 394 ~~e~~nrILtKrKLqELVrqIDPsesLDp-DVEELLLeI-----ADDFVDsV------------vs~ACrLAKHRKSdTL 455 (529)
.+.+++..|++..|..+++.++.. .++. ++++++.+. -++|+.-+ +..++++.-..+...|
T Consensus 34 ~D~d~~G~i~~~el~~~l~~~g~~-~~~~~~~~~l~~~~dg~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I 112 (166)
T 2mys_B 34 IDQNADGIIDKDDLRETFAAMGRL-NVKNEELDAMIKEASGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSI 112 (166)
T ss_pred HCCCCCCcCCHHHHHHHHHHhCCC-CCCHHHHHHHHHHCCCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCcce
Confidence 345667788888888888887431 2333 344433321 12444322 2333444444445556
Q ss_pred chhhHHHHHhh
Q 009666 456 EAKDILVHLER 466 (529)
Q Consensus 456 EvKDVQLhLER 466 (529)
+..++.-.|..
T Consensus 113 ~~~el~~~l~~ 123 (166)
T 2mys_B 113 KKSFLEELLTT 123 (166)
T ss_pred eHHHHHHHHHH
Confidence 66666555543
No 360
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=22.04 E-value=68 Score=31.48 Aligned_cols=26 Identities=0% Similarity=-0.037 Sum_probs=12.5
Q ss_pred HHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 440 TMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 440 vs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
+..+.++.-..+...|++.++.-.|.
T Consensus 428 ~~~~F~~~D~d~~G~Is~~El~~~l~ 453 (494)
T 3lij_A 428 LESAFQKFDQDGNGKISVDELASVFG 453 (494)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHC-
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 34444444444555555555554443
No 361
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=21.96 E-value=77 Score=23.03 Aligned_cols=20 Identities=5% Similarity=0.263 Sum_probs=12.8
Q ss_pred CcCCccCCHHHHHHHHHhhC
Q 009666 396 EFGNRILTKRSIQELVNQID 415 (529)
Q Consensus 396 e~~nrILtKrKLqELVrqID 415 (529)
.+++..|++..|..+++.+.
T Consensus 22 ~d~~G~i~~~el~~~l~~~g 41 (86)
T 2opo_A 22 TNGDGKISSSELGDALKTLG 41 (86)
T ss_dssp TTCSSEEEHHHHHHHHHTTT
T ss_pred CCCCCCcCHHHHHHHHHHcC
Confidence 44555677777777777664
No 362
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=21.94 E-value=20 Score=34.26 Aligned_cols=72 Identities=8% Similarity=0.126 Sum_probs=43.3
Q ss_pred CcCCccC----CHHHHHHHHHhhCCCC-------CCCHHHHHHHHHHHHHH--HHHHHHHHHHhhhhcCCCCcchhhHHH
Q 009666 396 EFGNRIL----TKRSIQELVNQIDPSE-------RLDPDVEDILVDIAEDF--VESITMFGCSLAKHRKSDTLEAKDILV 462 (529)
Q Consensus 396 e~~nrIL----tKrKLqELVrqIDPse-------sLDpDVEELLLeIADDF--VDsVvs~ACrLAKHRKSdTLEvKDVQL 462 (529)
+++.+|+ ++.+|+++++++..+. .=.++|++++-++.++| ||-+++.|. .........++.+|...
T Consensus 51 ~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG-~~~~~~~~~~~~e~w~~ 129 (273)
T 4fgs_A 51 AEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAG-GGSMLPLGEVTEEQYDD 129 (273)
T ss_dssp HTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCC-CCCCCCTTSCCHHHHHH
T ss_pred HCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC-CCCCCChhhccHHHHHH
Confidence 4555554 7889999999986532 22255777777777777 444444443 23344445566666666
Q ss_pred HHhhcc
Q 009666 463 HLERNW 468 (529)
Q Consensus 463 hLERnW 468 (529)
.++-|+
T Consensus 130 ~~~vNl 135 (273)
T 4fgs_A 130 TFDRNV 135 (273)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 665553
No 363
>3bhw_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.50A {Magnetospirillum magneticum}
Probab=21.90 E-value=2.1e+02 Score=26.37 Aligned_cols=69 Identities=16% Similarity=0.118 Sum_probs=38.8
Q ss_pred HHHHHHHHHhhCCCCCCCHHHHHHHHHH---------------HHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc-
Q 009666 404 KRSIQELVNQIDPSERLDPDVEDILVDI---------------AEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN- 467 (529)
Q Consensus 404 KrKLqELVrqIDPsesLDpDVEELLLeI---------------ADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn- 467 (529)
|+...++.+++ ..||+++.++|.+. .|.|+.+.+..-.+.....+...|+.+|+.-.|++.
T Consensus 57 kr~~~~i~~RL---~~L~~~~l~~l~~~~~~~~~~l~l~a~~~~~~Ll~dF~~eV~~~~~~~~~~~l~~~d~~~F~~~k~ 133 (209)
T 3bhw_A 57 KRQSSLMRNRL---ETMGPELWQMVRDGSTQVAIQAVFAAAIKHSTLLGDFLDLVVRDQFRMFRPDLPRKMWDQYLEQCR 133 (209)
T ss_dssp HHHHHHHHHHH---TTSCHHHHHHHHHSCHHHHHHHHHHHHHHHCHHHHHHHHHTHHHHTTSSSCBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---HhCCHHHHHHHHcCCHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHH
Confidence 55566676777 56777766555321 123333333333344445677789999998888765
Q ss_pred -cCcccCCC
Q 009666 468 -WNMTLPGF 475 (529)
Q Consensus 468 -WNI~IPGF 475 (529)
|+-.+-.+
T Consensus 134 ~~~~~v~~w 142 (209)
T 3bhw_A 134 NRDPLMPVW 142 (209)
T ss_dssp HHCTTC---
T ss_pred hcCCccccc
Confidence 54444333
No 364
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=21.88 E-value=1e+02 Score=27.27 Aligned_cols=35 Identities=17% Similarity=0.389 Sum_probs=16.3
Q ss_pred CHHHHHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHH
Q 009666 403 TKRSIQELVNQIDPS---ERLDPDVEDILVDIAEDFVE 437 (529)
Q Consensus 403 tKrKLqELVrqIDPs---esLDpDVEELLLeIADDFVD 437 (529)
+|+-|.+|++-|.+. ...+.+|.+-+|+|..+|-+
T Consensus 89 s~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~ 126 (149)
T 3g2s_A 89 KFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTV 126 (149)
T ss_dssp SHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHHHH
Confidence 444455555555432 23445555555544444443
No 365
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=21.85 E-value=1.6e+02 Score=22.93 Aligned_cols=42 Identities=24% Similarity=0.400 Sum_probs=23.7
Q ss_pred ccCCHHHHHHHHHhhCC---CCCCC-HHHHHHHHHH---------HHHHHHHHHH
Q 009666 400 RILTKRSIQELVNQIDP---SERLD-PDVEDILVDI---------AEDFVESITM 441 (529)
Q Consensus 400 rILtKrKLqELVrqIDP---sesLD-pDVEELLLeI---------ADDFVDsVvs 441 (529)
..|++..|.++++...+ +..++ .+|+++|.++ -+||+.-+..
T Consensus 26 G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 80 (95)
T 1j55_A 26 QTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (95)
T ss_dssp TEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 47899999999986432 12333 3566655554 2467765543
No 366
>2ig3_A Group III truncated haemoglobin; truncated hemoglobin, 2-ON-2 globin, oxygen storage-transpor; HET: HEM; 2.15A {Campylobacter jejuni}
Probab=21.77 E-value=50 Score=28.38 Aligned_cols=81 Identities=15% Similarity=0.120 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc--chhhHHHHHhhccCccc---C---CCCcccccccCCCC-CchHHHHH
Q 009666 425 EDILVDIAEDFVESITMFGCSLAKHRKSDTL--EAKDILVHLERNWNMTL---P---GFSGDEIKTFRKPL-VCDIHKER 495 (529)
Q Consensus 425 EELLLeIADDFVDsVvs~ACrLAKHRKSdTL--EvKDVQLhLERnWNI~I---P---GFssDEIR~~RK~~-ptEaHKQR 495 (529)
|+.|-.|+|.|.+.|...-. |+-... +.+ .-.|+.-|++|.++.+- - .|.+...+.-.... .+++|..|
T Consensus 8 ~~~i~~LV~~FY~~v~~Dp~-l~p~F~-~~~~~~~~d~~~~~~~l~~F~~~~lgGp~~Y~G~pm~~H~~l~~I~~~~fd~ 85 (127)
T 2ig3_A 8 QESIAKLMEIFYEKVRKDKD-LGPIFN-NAIGTSDEEWKEHKAKIGNFWAGMLLGEGDYNGQPLKKHLDLPPFPQEFFEI 85 (127)
T ss_dssp HHHHHHHHHHHHHHHHHCTT-HHHHHH-HHHCSSHHHHHHHHHHHHHHHHHHHTSCSCCCSCHHHHHHSSCCCCTTHHHH
T ss_pred HHHHHHHHHHHHHHHHhChh-HHHHHh-ccccccccCHHHHHHHHHHHHHHHhCCCCCCCCCCHHHhcCCCCCCHHHHHH
Confidence 45566777777777766432 222221 110 01155555555554332 1 13333222112233 45555544
Q ss_pred -HHHHHHHHhhhh
Q 009666 496 -LAAVSFTLDIMC 507 (529)
Q Consensus 496 -MALIRKtiK~m~ 507 (529)
|+++++++++..
T Consensus 86 Wl~~~~~al~e~~ 98 (127)
T 2ig3_A 86 WLKLFEESLNIVY 98 (127)
T ss_dssp HHHHHHHHHHHHB
T ss_pred HHHHHHHHHHHHC
Confidence 566777777653
No 367
>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis}
Probab=21.77 E-value=1.9e+02 Score=24.05 Aligned_cols=41 Identities=22% Similarity=0.105 Sum_probs=26.6
Q ss_pred HHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009666 405 RSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAK 448 (529)
Q Consensus 405 rKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAK 448 (529)
+.+.++++.. .+. |..+.++|.+++++.++.+-.+.-.|.+
T Consensus 119 ~~~~~~~~~a--~~~-D~~t~~~l~~~~~ee~~h~~~l~~~l~~ 159 (170)
T 2vzb_A 119 LRYQEIANFT--NGK-DYTTCDIAKHILAEEEEHEQDLQDYLTD 159 (170)
T ss_dssp HHHHHHHHHH--TTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--Hcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444 234 8888888888888887777666555544
No 368
>2amw_A Hypothetical protein NE2163; all helical protein, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=21.67 E-value=10 Score=29.02 Aligned_cols=26 Identities=12% Similarity=0.383 Sum_probs=21.7
Q ss_pred hcCC-CCcchhhHHHHHhhccCcccCC
Q 009666 449 HRKS-DTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 449 HRKS-dTLEvKDVQLhLERnWNI~IPG 474 (529)
.-|. +.|++-++...||+.||+.|+-
T Consensus 33 dlg~~DSl~~~elv~~lE~~fgi~i~~ 59 (83)
T 2amw_A 33 NIPELDSMAVVNVITALEEYFDFSVDD 59 (83)
T ss_dssp TSTTTTHHHHHHHHHHHHHHTTCCCCT
T ss_pred ccCccCHHHHHHHHHHHHHHhCCeeCH
Confidence 3466 7788889999999999999874
No 369
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=21.67 E-value=39 Score=33.49 Aligned_cols=60 Identities=12% Similarity=0.091 Sum_probs=31.9
Q ss_pred HHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccC
Q 009666 404 KRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWN 469 (529)
Q Consensus 404 KrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWN 469 (529)
-+.|.+|+++|+--..|.+-- |-+|-++.+++.++..+.+.+-..++.+||.-.|++-|.
T Consensus 292 ~~~i~~l~~~lglP~~L~e~G------i~~~~i~~~a~~a~~~~~~~np~~~t~~di~~il~~a~~ 351 (364)
T 3iv7_A 292 LEGLQRLRLSVNAPKRLSDYG------FEASGIAEAVDVTLEKVPANNPRPVTRENLSRLLEAALN 351 (364)
T ss_dssp HHHHHHHHHHTTCCCCGGGGT------CCGGGHHHHHHHHHTTSCTTCSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcHHHcC------CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHhc
Confidence 456777777776444333210 111222333333332223344456788999888888874
No 370
>3b0c_T CENP-T, centromere protein T; histone fold, DNA binding, DNA binding protein; HET: CIT; 2.20A {Gallus gallus} PDB: 3b0d_T* 3vh5_T 3vh6_T
Probab=21.46 E-value=1.6e+02 Score=25.21 Aligned_cols=44 Identities=16% Similarity=0.203 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHH------------HHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 424 VEDILVDIAEDFVESITMF------------GCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 424 VEELLLeIADDFVDsVvs~------------ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+.|+|-+++++++.+.+.+ .+.+|-.|....-...++..+++|+
T Consensus 33 l~e~l~~f~~~v~~da~~~A~HA~RKTV~~eDV~lalrr~g~~~~~~~l~~l~~~~ 88 (111)
T 3b0c_T 33 VEKCSERYFKQISSDLEAYSQHAGRKTVEMADVELLMRRQGLVTDKMPLHVLVERH 88 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHTTSSBTTBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHHCCCccccccHHHHHHHh
Confidence 3344555555555555444 3566767777766777766666655
No 371
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=21.45 E-value=1.5e+02 Score=21.76 Aligned_cols=62 Identities=6% Similarity=0.093 Sum_probs=32.2
Q ss_pred HHHHHHHHHhhC-CC--C-CCCHH-HHHHHHH-----HHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHh
Q 009666 404 KRSIQELVNQID-PS--E-RLDPD-VEDILVD-----IAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLE 465 (529)
Q Consensus 404 KrKLqELVrqID-Ps--e-sLDpD-VEELLLe-----IADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLE 465 (529)
..+|.++.+.+| .+ . .|+.+ +..+|.. +-..+-+..+...++.+-..+...|+..+..-.+.
T Consensus 8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 79 (93)
T 1k2h_A 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVA 79 (93)
T ss_dssp HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 456777777776 33 3 67754 5555554 32222233344444444445555677666644443
No 372
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=21.40 E-value=1.6e+02 Score=21.37 Aligned_cols=17 Identities=29% Similarity=0.702 Sum_probs=12.6
Q ss_pred cCCc-cCCHHHHHHHHHh
Q 009666 397 FGNR-ILTKRSIQELVNQ 413 (529)
Q Consensus 397 ~~nr-ILtKrKLqELVrq 413 (529)
+++. .|++..|..+++.
T Consensus 23 d~~G~~i~~~el~~~l~~ 40 (90)
T 1k8u_A 23 EGDKHTLSKKELKELIQK 40 (90)
T ss_dssp SSCTTEEEHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHH
Confidence 4444 7888888888886
No 373
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=21.39 E-value=1.5e+02 Score=28.96 Aligned_cols=46 Identities=4% Similarity=0.161 Sum_probs=31.0
Q ss_pred CCCCHHHHHHHHHHH----HHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhh
Q 009666 418 ERLDPDVEDILVDIA----EDFVESITMFGCSLAKHRKSDTLEAKDILVHLER 466 (529)
Q Consensus 418 esLDpDVEELLLeIA----DDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLER 466 (529)
..|++++.++|.... =.=+++|++++|.+|+ .+.|+..|+...+++
T Consensus 337 ~~~~~~a~~~l~~~~wpGNvreL~~~i~~~~~~~~---~~~i~~~~l~~~~~~ 386 (387)
T 1ny5_A 337 EGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSE---GKFIDRGELSCLVNS 386 (387)
T ss_dssp CEECHHHHHHHHHSCCTTHHHHHHHHHHHHHHHCC---SSEECHHHHHHHC--
T ss_pred CCCCHHHHHHHHhCCCCcHHHHHHHHHHHHHHhCC---CCcCcHHHCcHhhhc
Confidence 358999999888432 0125688899998885 357888888655543
No 374
>3pev_B Nucleoporin GLE1; RECA, heat, DEAD-BOX, ATPase, helicase, mRNA export, nuclear hydrolase; HET: IHP; 2.50A {Saccharomyces cerevisiae} PDB: 3peu_B* 3pex_B* 3pez_B* 3rrm_B* 3rrn_B*
Probab=21.38 E-value=5.3e+02 Score=25.35 Aligned_cols=86 Identities=14% Similarity=0.050 Sum_probs=48.2
Q ss_pred CHHHHHH-HHHHHHHHHHHHHHHH--------------HHhhhhcCCCCcchhhHHH-HHhhccCcccCCCCc---cc--
Q 009666 421 DPDVEDI-LVDIAEDFVESITMFG--------------CSLAKHRKSDTLEAKDILV-HLERNWNMTLPGFSG---DE-- 479 (529)
Q Consensus 421 DpDVEEL-LLeIADDFVDsVvs~A--------------CrLAKHRKSdTLEvKDVQL-hLERnWNI~IPGFss---DE-- 479 (529)
++.+... |.-||+.||...-+.. +.|.. + --|+.||.+ +|-+.-=+-||-+.. ||
T Consensus 79 ~~~~~~~~ln~lAK~iV~Q~e~ev~~~p~sA~PlA~v~~~l~~-~---~p~~~dillA~l~k~CP~~vp~~~~~~teegr 154 (297)
T 3pev_B 79 DSLAYHWILNFIAKAVVHQAETEVRVKPESALPLGKLTLYLLV-Q---FPELQELFMARLVKKCPFVIGFTCEIDTEKGR 154 (297)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH-H---STTHHHHHHHHHHHHCGGGGTCCCCCSSHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhccCCcccchHHHHHHHHHH-h---CccHHHHHHHHHhhcCCcccccCCCcccHHHH
Confidence 4556654 4467888887654432 11222 1 146777744 333333344443432 22
Q ss_pred -ccccCC-----CCCchHHHHHHHHHHHHHhhhhhhe
Q 009666 480 -IKTFRK-----PLVCDIHKERLAAVSFTLDIMCLLV 510 (529)
Q Consensus 480 -IR~~RK-----~~ptEaHKQRMALIRKtiK~m~~~~ 510 (529)
.-.||+ +-..+.|.+||.-|-+.-.+|+++-
T Consensus 155 ~~mG~~~~~dg~~E~~~~y~~Rm~Gi~~lyAAI~~~~ 191 (297)
T 3pev_B 155 QNMGWKRNNENKWEDNTSYDERMGGILSLFAIITRLQ 191 (297)
T ss_dssp HHTTCCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHcCCeeCCCCCcccHHHHHHHHHHHHHHHHHHHhCc
Confidence 112333 4457789999999999888887663
No 375
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=21.38 E-value=1.6e+02 Score=24.97 Aligned_cols=48 Identities=15% Similarity=0.140 Sum_probs=25.2
Q ss_pred CCccCCHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 009666 398 GNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESITMFGCSLAKHRK 451 (529)
Q Consensus 398 ~nrILtKrKLqELVrqIDPsesLDpDVEELLLeIADDFVDsVvs~ACrLAKHRK 451 (529)
+..+.++..|.+++++++ ||. +++...+.++-+++.+....++|+..+
T Consensus 101 ~~~~~~~~~l~~~a~~~G----ld~--~~~~~~~~s~~~~~~v~~~~~~a~~~g 148 (195)
T 3hd5_A 101 RKRLFDKKAMGEWAASQG----VDR--AKFDSVFDSFSVQTQVQRASQLAEAAH 148 (195)
T ss_dssp CCCCCSHHHHHHHHHHTT----CCH--HHHHHHHTCHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCHHHHHHHHHHhC----CCH--HHHHHHHcCHHHHHHHHHHHHHHHHhC
Confidence 345566777777776642 333 233333444555555555555555443
No 376
>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1
Probab=21.24 E-value=10 Score=31.17 Aligned_cols=25 Identities=12% Similarity=0.387 Sum_probs=21.5
Q ss_pred cCCCCcchhhHHHHHhhccCcccCC
Q 009666 450 RKSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IPG 474 (529)
-+-|.|++-+|...||++||+.||-
T Consensus 46 LGlDSL~~veL~~~LE~~fgi~i~~ 70 (100)
T 1vku_A 46 LGFDSIDVIDLVMFFEDEFALRIED 70 (100)
T ss_dssp TTCCHHHHHHHHHHHHHHHTCCCCH
T ss_pred cCCchHHHHHHHHHHHHHHCCCCCH
Confidence 4677888889999999999999874
No 377
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=21.12 E-value=1e+02 Score=23.38 Aligned_cols=15 Identities=7% Similarity=0.162 Sum_probs=7.8
Q ss_pred cCCCCcchhhHHHHH
Q 009666 450 RKSDTLEAKDILVHL 464 (529)
Q Consensus 450 RKSdTLEvKDVQLhL 464 (529)
.+...|+.++..-.+
T Consensus 92 ~~dg~i~~~eF~~~~ 106 (109)
T 5pal_A 92 DHDGKIGADEFAKMV 106 (109)
T ss_dssp TCSSSEEHHHHHHHH
T ss_pred CCCCcCcHHHHHHHH
Confidence 344556666654444
No 378
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=21.12 E-value=2.3e+02 Score=23.02 Aligned_cols=17 Identities=6% Similarity=0.180 Sum_probs=7.6
Q ss_pred cCCCCcchhhHHHHHhh
Q 009666 450 RKSDTLEAKDILVHLER 466 (529)
Q Consensus 450 RKSdTLEvKDVQLhLER 466 (529)
.+...|+..++.-.|..
T Consensus 111 d~~G~i~~~ef~~~~~~ 127 (190)
T 1fpw_A 111 NHDGYITFDEMLTIVAS 127 (190)
T ss_dssp SCSSEEEHHHHHHHHHH
T ss_pred CCCCcCcHHHHHHHHHH
Confidence 33444444444444443
No 379
>3nnr_A Transcriptional regulator, TETR family; TETR-family transcriptional regulator, structural genomics, center for structural genomics, JCSG; HET: MSE; 2.49A {Marinobacter aquaeolei}
Probab=21.08 E-value=17 Score=30.81 Aligned_cols=17 Identities=12% Similarity=0.300 Sum_probs=7.9
Q ss_pred CHHHHHHHHHHHHHHHH
Q 009666 421 DPDVEDILVDIAEDFVE 437 (529)
Q Consensus 421 DpDVEELLLeIADDFVD 437 (529)
++++.+.+.++.+.+.+
T Consensus 109 ~~~~~~~~~~~~~~~~~ 125 (228)
T 3nnr_A 109 DPRLRQDYREFTNRCLA 125 (228)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 34444555554444433
No 380
>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}
Probab=21.06 E-value=34 Score=29.49 Aligned_cols=30 Identities=3% Similarity=0.121 Sum_probs=24.7
Q ss_pred cCCCCcchhhHHHHHhhccCcccCCCCcccc
Q 009666 450 RKSDTLEAKDILVHLERNWNMTLPGFSGDEI 480 (529)
Q Consensus 450 RKSdTLEvKDVQLhLERnWNI~IPGFssDEI 480 (529)
-+.|.|++-|+...||++||+.||-- .+.+
T Consensus 44 LglDSLd~VeLVm~lE~~fGi~ipd~-~e~~ 73 (102)
T 2l9f_A 44 LHMSSITVGQLVNEAARAMGLSAVAM-PTNF 73 (102)
T ss_dssp SCCCHHHHHHHHHHHHHHHTCSTTSS-CSCC
T ss_pred cCCcHHHHHHHHHHHHHHhCCCCCcc-HHHH
Confidence 47788999999999999999999766 4444
No 381
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=20.92 E-value=3.3e+02 Score=22.21 Aligned_cols=20 Identities=10% Similarity=0.152 Sum_probs=13.5
Q ss_pred CCcCCccCCHHHHHHHHHhh
Q 009666 395 DEFGNRILTKRSIQELVNQI 414 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqI 414 (529)
+.+++..|++..|..+++.+
T Consensus 23 D~d~dG~i~~~E~~~~l~~~ 42 (191)
T 2ccm_A 23 DCNHDGVIEWDDFELAIKKI 42 (191)
T ss_dssp CTTCSSEECHHHHHHHHHHH
T ss_pred cCCCCCeeeHHHHHHHHHHH
Confidence 45566677777777776666
No 382
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=20.88 E-value=2.8e+02 Score=22.54 Aligned_cols=42 Identities=14% Similarity=0.373 Sum_probs=26.7
Q ss_pred ccCCHHHHHHHHHh-hCC--CCCCCHH-HHHHHHHH---------HHHHHHHHHH
Q 009666 400 RILTKRSIQELVNQ-IDP--SERLDPD-VEDILVDI---------AEDFVESITM 441 (529)
Q Consensus 400 rILtKrKLqELVrq-IDP--sesLDpD-VEELLLeI---------ADDFVDsVvs 441 (529)
..|++..|..+++. +.. ...++++ |+++|.++ -+|||.-+..
T Consensus 30 G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~ 84 (104)
T 3zwh_A 30 FKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSS 84 (104)
T ss_dssp TSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred CeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 58999999999985 542 2345554 55555554 2477765543
No 383
>4aq3_A Apoptosis regulator BCL-2, BCL-2-like protein 1; chimera; HET: 398; 2.40A {Homo sapiens} PDB: 1g5m_A 1gjh_A 1ysw_A* 2o21_A* 2o22_A*
Probab=20.59 E-value=1.1e+02 Score=27.84 Aligned_cols=44 Identities=11% Similarity=0.245 Sum_probs=30.3
Q ss_pred HHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH---------HHHHHHHhhhhc
Q 009666 404 KRSIQELVNQIDPSERLDPDVEDILVDIAEDFVES---------ITMFGCSLAKHR 450 (529)
Q Consensus 404 KrKLqELVrqIDPsesLDpDVEELLLeIADDFVDs---------Vvs~ACrLAKHR 450 (529)
++.+.+|+++++-+. +.+.+.+.++|++..+| ++.|++.||++-
T Consensus 71 ~~~f~~~~~~L~it~---~~a~~~F~~Va~elF~dGiNWGRIVaLfaF~g~La~~~ 123 (169)
T 4aq3_A 71 RGDFAEMSSQLHLTP---FTARGRFATVVEELFRDGVNWGRIVAFFEFGGVMCVES 123 (169)
T ss_dssp HHHHHHHHHHCCCCT---TTHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCC---CcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 446677777764322 25778888999987655 567888888754
No 384
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=20.59 E-value=64 Score=26.12 Aligned_cols=47 Identities=15% Similarity=0.115 Sum_probs=30.8
Q ss_pred CCHHHHHHHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009666 402 LTKRSIQELVNQI-DPSERLDPDVEDILVDIAEDFVESITMFGCSLAK 448 (529)
Q Consensus 402 LtKrKLqELVrqI-DPsesLDpDVEELLLeIADDFVDsVvs~ACrLAK 448 (529)
++...+..|++=| .....++++...-|+.+||.|--.-+...|.-.-
T Consensus 72 ~~~~~~~~~l~~~Y~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l 119 (145)
T 4eoz_A 72 VEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDAL 119 (145)
T ss_dssp SCHHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHCC-
T ss_pred CCHHHHHHHHHhhccCccCCcHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 5677777777766 2344566666666888999886666666665443
No 385
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=20.52 E-value=97 Score=22.05 Aligned_cols=63 Identities=6% Similarity=0.128 Sum_probs=33.7
Q ss_pred HHHHHHHHHhhCCC--CCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhc
Q 009666 404 KRSIQELVNQIDPS--ERLDPD-VEDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERN 467 (529)
Q Consensus 404 KrKLqELVrqIDPs--esLDpD-VEELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERn 467 (529)
+.+|.++.+.+|.+ ..|+.+ ...+|..+. .+-+.-+....+.+-..+...|+..+..-.+.+.
T Consensus 2 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~ 67 (78)
T 1k9u_A 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67 (78)
T ss_dssp -CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred hHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence 35688888888754 456643 555555544 3333334444444444445556666665554443
No 386
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=20.51 E-value=1.7e+02 Score=22.93 Aligned_cols=20 Identities=0% Similarity=0.132 Sum_probs=13.4
Q ss_pred CcC-CccCCHHHHHHHHHhhC
Q 009666 396 EFG-NRILTKRSIQELVNQID 415 (529)
Q Consensus 396 e~~-nrILtKrKLqELVrqID 415 (529)
.++ +..|++..|..+++.++
T Consensus 29 ~~~~~G~i~~~e~~~~l~~~~ 49 (161)
T 1dtl_A 29 LGAEDGSISTKELGKVMRMLG 49 (161)
T ss_dssp TTCGGGSBCHHHHHHHHHHTT
T ss_pred CCCCCCcCcHHHHHHHHHHcC
Confidence 344 56677777777777663
No 387
>3aq9_A Group 1 truncated hemoglobin; 2/2 fold hemoglobin, nitric oxide detoxification, oxygen BIN; HET: HEM; 1.74A {Tetrahymena pyriformis} PDB: 3aq5_A* 3aq6_A* 3aq8_A* 3aq7_A*
Probab=20.49 E-value=1.4e+02 Score=24.39 Aligned_cols=80 Identities=13% Similarity=0.155 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhHHHHHhhccCcccCC---CCcccccc-cCCCCCchHHHHH-HHHH
Q 009666 425 EDILVDIAEDFVESITMFGCSLAKHRKSDTLEAKDILVHLERNWNMTLPG---FSGDEIKT-FRKPLVCDIHKER-LAAV 499 (529)
Q Consensus 425 EELLLeIADDFVDsVvs~ACrLAKHRKSdTLEvKDVQLhLERnWNI~IPG---FssDEIR~-~RK~~ptEaHKQR-MALI 499 (529)
++.|..|+|+|.+.|... -.|+..-.. .+.....-.|..-|-..+-| |+...++. -.....+++|..| +.++
T Consensus 14 ~~~i~~lv~~FY~~v~~d-p~l~~~F~~--~d~~~~~~~l~~fl~~~~gGp~~Y~g~~m~~~H~~~~I~~~~f~~wl~~~ 90 (121)
T 3aq9_A 14 ENAMKAAVPLFYKKVLAD-ERVKHFFKN--TDMDHQTKQETDFLTMLLGGPNHYKGKNMTEAHKGMNLQNLHFDAIIENL 90 (121)
T ss_dssp HHHHHHHHHHHHHHHTTC-TTTGGGGTT--CCHHHHHHHHHHHHHHHTTSCCCCCSCCHHHHTTTSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC-HHHHHhhCC--CCHHHHHHHHHHHHHHHhCCCCCCCCccHHHHhcCCCcCHHHHHHHHHHH
Confidence 678999999999998554 234433221 13333333444444444433 33334422 2233456666665 6778
Q ss_pred HHHHhhhh
Q 009666 500 SFTLDIMC 507 (529)
Q Consensus 500 RKtiK~m~ 507 (529)
+++|++..
T Consensus 91 ~~al~~~~ 98 (121)
T 3aq9_A 91 AATLKELG 98 (121)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 88888864
No 388
>3n5w_A Nitric oxide synthase; heme enzyme, substrate inhibitor, Zn oxidoreductase, oxidoreductase-oxidoreductase inhibitor COM; HET: HEM XFJ; 1.73A {Rattus norvegicus} SCOP: d.174.1.1 PDB: 2hx3_A* 2hx4_A* 3b3m_A* 3b3n_A* 3b3o_A* 3b3p_A* 3hsn_A* 3hso_A* 3hsp_A* 3jt3_A* 3jt4_A* 3jt5_A* 3jt6_A* 3jt7_A* 3jt8_A* 3jt9_A* 3jta_A* 3n2r_A* 3n5v_A* 1om4_A* ...
Probab=20.47 E-value=1.3e+02 Score=31.78 Aligned_cols=18 Identities=22% Similarity=0.449 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 009666 424 VEDILVDIAEDFVESITM 441 (529)
Q Consensus 424 VEELLLeIADDFVDsVvs 441 (529)
..|.|++.|.|||+..-.
T Consensus 54 ~~e~ll~eA~~Fi~q~y~ 71 (422)
T 3n5w_A 54 TKDQLFPLAKEFLDQYYS 71 (422)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 445689999999986543
No 389
>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1
Probab=20.45 E-value=36 Score=25.72 Aligned_cols=24 Identities=17% Similarity=0.310 Sum_probs=20.8
Q ss_pred CCCCcchhhHHHHHhhccCcccCC
Q 009666 451 KSDTLEAKDILVHLERNWNMTLPG 474 (529)
Q Consensus 451 KSdTLEvKDVQLhLERnWNI~IPG 474 (529)
|-|.|.+-++...||+.||+.||-
T Consensus 37 G~DSL~~vel~~~le~~fgi~i~~ 60 (83)
T 1or5_A 37 GYDSLALLETAAVLQQRYGIALTD 60 (83)
T ss_dssp SCCHHHHHHHHHHHHTTSCCCCSH
T ss_pred CCCHHHHHHHHHHHHHHHCCccCH
Confidence 677788889999999999999874
No 390
>2r9v_A ATP synthase subunit alpha; TM1612, structural genomics, JOI for structural genomics, JCSG, protein structure initiative ATP synthesis; HET: ATP PG4; 2.10A {Thermotoga maritima MSB8}
Probab=20.43 E-value=47 Score=35.40 Aligned_cols=31 Identities=23% Similarity=0.484 Sum_probs=25.3
Q ss_pred HHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH
Q 009666 408 QELVNQIDPSERLDPDVEDILVDIAEDFVES 438 (529)
Q Consensus 408 qELVrqIDPsesLDpDVEELLLeIADDFVDs 438 (529)
.+++++|+.+..||+|.++.|.++.++|.+.
T Consensus 482 ~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~ 512 (515)
T 2r9v_A 482 QDILDDIKTKKELTSETEEKLKKAIEEFKTT 512 (515)
T ss_dssp HHHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Confidence 3666777777889999999999999999763
No 391
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=20.42 E-value=1.2e+02 Score=20.59 Aligned_cols=21 Identities=14% Similarity=0.167 Sum_probs=15.2
Q ss_pred CCcCCccCCHHHHHHHHHhhC
Q 009666 395 DEFGNRILTKRSIQELVNQID 415 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqID 415 (529)
+.+++..|++..|..+++.+.
T Consensus 11 D~d~~G~i~~~el~~~l~~~~ 31 (67)
T 1tiz_A 11 DKNKDGKLSLDEFREVALAFS 31 (67)
T ss_dssp CTTSSSCEEHHHHHHHHHHTC
T ss_pred CCCCCCcCcHHHHHHHHHHhC
Confidence 345566788888888888764
No 392
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=20.40 E-value=36 Score=31.86 Aligned_cols=34 Identities=15% Similarity=0.007 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHhhhhcC--CCCcchhhHHHHHhh
Q 009666 432 AEDFVESITMFGCSLAKHRK--SDTLEAKDILVHLER 466 (529)
Q Consensus 432 ADDFVDsVvs~ACrLAKHRK--SdTLEvKDVQLhLER 466 (529)
..+.+..++...+++|+..| .+ ++...+...|+.
T Consensus 213 ~~~l~~~~~~E~~~va~a~G~~~~-~~~~~~~~~~~~ 248 (312)
T 3hn2_A 213 SRKLVRGIMLEVIAGANAQGLATF-IADGYVDDMLEF 248 (312)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCSSC-CCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCccC-CCHHHHHHHHHH
Confidence 34556667777778888877 54 444445555554
No 393
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=20.18 E-value=58 Score=23.45 Aligned_cols=21 Identities=10% Similarity=0.324 Sum_probs=14.6
Q ss_pred CCcCCccCCHHHHHHHHHhhC
Q 009666 395 DEFGNRILTKRSIQELVNQID 415 (529)
Q Consensus 395 ~e~~nrILtKrKLqELVrqID 415 (529)
+.+++..|++..|..+++.+.
T Consensus 18 D~d~~G~i~~~el~~~l~~~g 38 (81)
T 1c7v_A 18 DANGDGVIDFDEFKFIMQKVG 38 (81)
T ss_dssp SCSGGGEECHHHHHHHSSTTT
T ss_pred CCCCCCcCCHHHHHHHHHHhC
Confidence 345556788888888877763
No 394
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=20.11 E-value=1e+02 Score=26.41 Aligned_cols=31 Identities=6% Similarity=0.025 Sum_probs=21.3
Q ss_pred HHHHHHHhhhhcCCCCcchhhHHHHHhhccC
Q 009666 439 ITMFGCSLAKHRKSDTLEAKDILVHLERNWN 469 (529)
Q Consensus 439 Vvs~ACrLAKHRKSdTLEvKDVQLhLERnWN 469 (529)
.+..+.++.-..+...|+..++.-.|....+
T Consensus 94 ~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~ 124 (211)
T 2ggz_A 94 KLKWYFKLYDADGNGSIDKNELLDMFMAVQA 124 (211)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCCcCcHHHHHHHHHHHHh
Confidence 3455566665667778888888877776543
No 395
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=20.07 E-value=2.2e+02 Score=23.14 Aligned_cols=32 Identities=6% Similarity=0.122 Sum_probs=21.8
Q ss_pred HHHHHHHHHhhhhcCCCCcchhhHHHHHhhcc
Q 009666 437 ESITMFGCSLAKHRKSDTLEAKDILVHLERNW 468 (529)
Q Consensus 437 DsVvs~ACrLAKHRKSdTLEvKDVQLhLERnW 468 (529)
+..+..+.++.-..+...|+..++.-.|...+
T Consensus 91 ~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~ 122 (183)
T 1s6c_A 91 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIY 122 (183)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHH
Confidence 34556666666666777788888877776643
No 396
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=20.07 E-value=1.2e+02 Score=28.59 Aligned_cols=50 Identities=14% Similarity=0.149 Sum_probs=31.6
Q ss_pred HHHHHHHHHhhCCCC-CCCHHHHHHHHHHHHHHHHHH----HHHHHHhhhhcCCCC
Q 009666 404 KRSIQELVNQIDPSE-RLDPDVEDILVDIAEDFVESI----TMFGCSLAKHRKSDT 454 (529)
Q Consensus 404 KrKLqELVrqIDPse-sLDpDVEELLLeIADDFVDsV----vs~ACrLAKHRKSdT 454 (529)
.+++.+|++.+ ... .+.+...-.++++++.++..+ +..+..||+.-+-+.
T Consensus 173 ~~~~~~ll~~~-~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~ 227 (320)
T 4dll_A 173 FERSLPLLKVF-GRATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGGADM 227 (320)
T ss_dssp HHHHHHHHHHH-EEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCH
T ss_pred HHHHHHHHHhc-CCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 45678888888 432 343334444667777766554 677888888766553
Done!