Query 009669
Match_columns 529
No_of_seqs 384 out of 2522
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 10:23:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009669.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009669hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ddh_A Acyl-COA oxidase; beta 100.0 2.9E-82 9.8E-87 702.1 48.6 519 1-525 1-525 (661)
2 1w07_A Acyl-COA oxidase; oxido 100.0 2.3E-80 8E-85 687.7 51.4 520 1-525 1-521 (659)
3 2z1q_A Acyl-COA dehydrogenase; 100.0 3.2E-57 1.1E-61 496.0 34.0 421 28-508 29-474 (577)
4 3owa_A Acyl-COA dehydrogenase; 100.0 3.4E-56 1.2E-60 488.1 37.7 369 27-443 33-427 (597)
5 2jif_A Short/branched chain sp 100.0 2.1E-56 7.1E-61 470.1 31.2 358 25-441 27-403 (404)
6 2d29_A Acyl-COA dehydrogenase; 100.0 9.4E-56 3.2E-60 462.7 32.0 358 26-441 6-386 (387)
7 1ukw_A Acyl-COA dehydrogenase; 100.0 7.8E-56 2.7E-60 462.1 31.2 355 27-440 5-378 (379)
8 2vig_A Short-chain specific ac 100.0 1E-55 3.6E-60 463.0 32.1 361 26-444 5-384 (391)
9 3pfd_A Acyl-COA dehydrogenase; 100.0 2E-56 7E-61 468.7 26.5 363 18-440 12-393 (393)
10 1buc_A Butyryl-COA dehydrogena 100.0 1.6E-55 5.4E-60 460.4 32.1 356 27-439 5-382 (383)
11 1ivh_A Isovaleryl-COA dehydrog 100.0 7.5E-56 2.6E-60 464.6 29.4 359 26-442 12-393 (394)
12 1egd_A Medium chain acyl-COA d 100.0 1.5E-55 5E-60 462.6 30.4 359 26-442 15-394 (396)
13 3r7k_A Probable acyl COA dehyd 100.0 1.4E-55 4.9E-60 463.8 29.4 353 27-438 29-401 (403)
14 3p4t_A Putative acyl-COA dehyd 100.0 2.2E-55 7.6E-60 462.3 30.6 365 14-438 15-399 (403)
15 2dvl_A Acyl-COA dehydrogenase; 100.0 1.9E-55 6.4E-60 458.1 29.1 351 27-440 3-372 (372)
16 2pg0_A Acyl-COA dehydrogenase; 100.0 6.2E-55 2.1E-59 456.2 32.7 355 26-438 9-383 (385)
17 4hr3_A Putative acyl-COA dehyd 100.0 5.1E-55 1.7E-59 461.3 30.6 366 20-443 4-413 (415)
18 1rx0_A Acyl-COA dehydrogenase 100.0 1.3E-54 4.5E-59 454.9 32.7 356 26-440 18-392 (393)
19 3nf4_A Acyl-COA dehydrogenase; 100.0 3.5E-55 1.2E-59 458.4 26.6 354 26-440 15-387 (387)
20 3ii9_A Glutaryl-COA dehydrogen 100.0 1.9E-55 6.4E-60 461.9 24.5 359 20-440 14-391 (396)
21 3sf6_A Glutaryl-COA dehydrogen 100.0 2.1E-54 7.2E-59 454.9 30.4 355 20-440 25-398 (403)
22 2wbi_A Acyl-COA dehydrogenase 100.0 1.2E-53 4E-58 452.6 34.9 378 15-445 13-423 (428)
23 2ix5_A Acyl-coenzyme A oxidase 100.0 1.4E-54 4.6E-59 460.2 27.6 353 26-440 54-424 (436)
24 3swo_A Glutaryl-COA dehydrogen 100.0 6.9E-55 2.4E-59 458.0 24.9 364 13-440 11-393 (399)
25 2eba_A Putative glutaryl-COA d 100.0 3.8E-54 1.3E-58 450.3 29.5 352 26-440 10-381 (385)
26 3mpi_A Glutaryl-COA dehydrogen 100.0 1.5E-53 5.2E-58 447.5 27.0 354 26-438 4-382 (397)
27 2uxw_A VERY-long-chain specifi 100.0 7E-53 2.4E-57 463.0 32.2 353 33-442 56-432 (607)
28 1siq_A GCD, glutaryl-COA dehyd 100.0 4E-53 1.4E-57 443.5 28.0 354 26-440 13-384 (392)
29 1r2j_A Protein FKBI; polyketid 100.0 3.1E-53 1.1E-57 440.4 25.1 318 69-440 26-363 (366)
30 3mkh_A Nitroalkane oxidase; ox 100.0 8.1E-52 2.8E-56 439.8 31.8 370 26-441 6-417 (438)
31 2c12_A Nitroalkane oxidase; ox 100.0 1.4E-49 4.8E-54 422.7 32.6 364 27-439 6-418 (439)
32 3mxl_A Nitrososynthase; flavin 100.0 7.8E-49 2.7E-53 411.2 22.9 359 26-440 8-393 (395)
33 3m9v_A FAD-dependent oxidoredu 100.0 1.6E-47 5.4E-52 406.9 23.2 367 17-441 12-405 (439)
34 2or0_A Hydroxylase; APC7385, r 100.0 4.1E-47 1.4E-51 400.7 22.7 352 28-440 19-401 (414)
35 3djl_A Protein AIDB; alpha hel 100.0 6.3E-46 2.1E-50 402.1 25.7 324 70-441 89-442 (541)
36 2rfq_A 3-HSA hydroxylase, oxyg 100.0 6.6E-46 2.3E-50 388.9 24.5 351 33-440 11-386 (394)
37 2jbr_A P-hydroxyphenylacetate 100.0 6.1E-46 2.1E-50 392.7 21.6 352 33-440 39-414 (422)
38 2yyk_A 4-hydroxyphenylacetate- 100.0 4.9E-34 1.7E-38 305.0 24.8 272 115-438 122-422 (481)
39 1u8v_A Gamma-aminobutyrate met 100.0 4.5E-34 1.5E-38 305.7 23.2 275 109-433 119-421 (490)
40 3hwc_A Chlorophenol-4-monooxyg 100.0 1.8E-29 6.1E-34 269.8 26.7 276 113-439 127-431 (515)
41 4g5e_A 2,4,6-trichlorophenol 4 99.9 5.1E-22 1.7E-26 212.5 25.9 245 117-406 134-392 (517)
42 3owa_A Acyl-COA dehydrogenase; 90.6 1.8 6E-05 46.9 12.3 125 296-441 467-592 (597)
43 2uxw_A VERY-long-chain specifi 53.4 90 0.0031 33.4 12.0 67 323-400 509-575 (607)
44 2z1q_A Acyl-COA dehydrogenase; 25.3 6E+02 0.021 26.5 13.7 97 323-441 471-570 (577)
45 4gbu_A NADPH dehydrogenase 1; 20.7 26 0.00089 35.5 0.7 59 384-447 177-237 (400)
No 1
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=100.00 E-value=2.9e-82 Score=702.10 Aligned_cols=519 Identities=44% Similarity=0.762 Sum_probs=440.9
Q ss_pred CCCccchHHHhccCCCCHHHHHHHHcCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 009669 1 MDGVDQLAPERKKAQFDVDEMKIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELR 80 (529)
Q Consensus 1 ~~~~~~l~~~r~~~~f~~~~m~~~~~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g 80 (529)
|++ ||++||++++||+++|+.+|+|++++.++|+++++++.++|.|...+...+++++.++....+...+.+.+.++|
T Consensus 1 ~~~--~l~~er~~~~f~~~~l~~~l~g~~~~~~~r~~~~~~l~~~p~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~ 78 (661)
T 2ddh_A 1 MNP--DLRKERASATFNPELITHILDGSPENTRRRREIENLILNDPDFQHEDYNFLTRSQRYEVAVKKSATMVKKMREYG 78 (661)
T ss_dssp CCH--HHHHHHHHCSSCHHHHHHHHHTSHHHHHHHHHHHHHHHTCGGGCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCh--HHHHHHhhCCCCHHHHHHHHCCChhHHHHHHHHHHHHhcCcccccCCcCCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 455 899999999999999999999999999999999999999999886655678999999888888788877777788
Q ss_pred CCHHHHh-HhhhhcCC--cchhhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeC
Q 009669 81 LSEEEAS-MLRSSVDE--PAFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDP 157 (529)
Q Consensus 81 ~~~~~gg-~~~~~~~~--~~~~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~ 157 (529)
+...... ....+++. +.++.+|+.+++++|..+||++|+++|||++.+|++++|||+|||+||||+.+++|+|++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~h~~l~~~~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~l~TtA~~d~ 158 (661)
T 2ddh_A 79 ISDPEEIMWFKNSVHRGHPEPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRGLETTATYDP 158 (661)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTHHHHHTHHHHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEET
T ss_pred CCCchHHHHHHHHhccchhhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCcccceeEEEEcC
Confidence 7632211 12222222 57788998899999999999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEecCCCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCC
Q 009669 158 QTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTM 237 (529)
Q Consensus 158 ~~~~~vLntp~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~ 237 (529)
++|+|+||||+++|+|+||+|++..||+++|+|+++.+++++|+++|+||+||+++|.+.|||+|+++|+|+| ++++
T Consensus 159 ~~~~~vLntP~~~G~K~wis~~a~~Ad~~vV~Ar~~~~~~~~G~~~FlVp~rd~~~~~~~pGV~v~~~~~k~G---l~g~ 235 (661)
T 2ddh_A 159 KTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQLITQGECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFG---YEEM 235 (661)
T ss_dssp TTTEEEEECCSSTTSEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCCSS---CTTC
T ss_pred CCCeEEEcCCCCCeEEEecCCCcccCCEEEEEEEEccCCCCCceEEEEEecccccCCCCCCCeEEecCccccc---CCCC
Confidence 8899999999999999999986789999999999987766789999999999999999999999999999999 9999
Q ss_pred CcceEEecceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCC
Q 009669 238 DNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKN 317 (529)
Q Consensus 238 ~~~~v~fd~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~ 317 (529)
++++|.|+||+||++++|+++++|.++|.+..+...+ ..+..|..+|+.+++.++|+++++++++++|+++|+|||+++
T Consensus 236 ~~~~v~Fd~VrVP~~~lLg~~~~v~~~G~~~~~~~~~-~~~~~l~~~R~~iaa~~~G~a~~al~~a~~ya~~R~qfg~~~ 314 (661)
T 2ddh_A 236 DNGYLKMDNYRIPRENMLMKYAQVKPDGTYVKPLSNK-LTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEIKQ 314 (661)
T ss_dssp CCEEEEESSEEEEGGGBCCSSCEECTTCCEECCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCSST
T ss_pred cceEEEeccEEECHHHhcCcccccCCCCceeccchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCCC
Confidence 9999999999999999999988887788886543333 567788899999999999999999999999999999999877
Q ss_pred CCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHH
Q 009669 318 GGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRK 397 (529)
Q Consensus 318 ~~~e~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q 397 (529)
+.+|.||++||.+|++|+++++.+++++++++++++.+++.....+.++....++.+..++++|+++++.+.+++++|+|
T Consensus 315 ~~~e~~i~~~q~vq~rLa~~~a~~~aar~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~aa~aK~~at~~a~~~~~~a~q 394 (661)
T 2ddh_A 315 SEPEPQILDFQTQQYKLFPLLATAYAFHFVGRYMKETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGIEECRM 394 (661)
T ss_dssp TSCCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999888643322222232223467889999999999999999999999
Q ss_pred HhccccccCcCCHHHHhhhhcccccccccHHHHHHHHHHHHHHHHHHhcCCCCccccccccccch-HHhhhcC--CCccc
Q 009669 398 LCGGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGRAE-QLMQCHC--GVQKA 474 (529)
Q Consensus 398 ~~GG~Gy~~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~--~~~~~ 474 (529)
+|||+||+++++++++|||+++.++++|+|+++++++++.+|+.+++..++....++..||.+.. ...+.++ ...+.
T Consensus 395 ~~GG~G~~~~~~l~r~~rda~~~~~~eG~~~vl~~~iar~lL~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 474 (661)
T 2ddh_A 395 ACGGHGYSHSSGIPNIYVTFTPACTFEGENTVMMLQTARFLMKIYDQVRSGKLVGGMVSYLNDLPSQRIQPQQVAVWPTM 474 (661)
T ss_dssp HTTHHHHSGGGSHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHHHHHHHHTCCCCGGGGGGGGCCC--------------
T ss_pred HhCcccccccCcHHHHHHhcceeeEecCchHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHhhhhhhccccccccccch
Confidence 99999999999999999999999999999999999999999999988777766677999998754 2222111 12346
Q ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHhhccceeeEE
Q 009669 475 EDWLNPSAILEAFEARAIRMSVACAQNLSKFTNQEEGNLFILDIGSLKLFR 525 (529)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (529)
.++.||++++++|++|+++++..+++++++..+.+.+....||..++.+.+
T Consensus 475 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~g~~~~~a~n~~~~~~~~ 525 (661)
T 2ddh_A 475 VDINSLEGLTEAYKLRAARLVEIAAKNLQTHVSHRKSKEVAWNLTSVDLVR 525 (661)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTHHHHHH
T ss_pred hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999888888888999988776543
No 2
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=100.00 E-value=2.3e-80 Score=687.67 Aligned_cols=520 Identities=80% Similarity=1.260 Sum_probs=437.1
Q ss_pred CCCccchHHHhccCCCCHHHHHHHHcCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 009669 1 MDGVDQLAPERKKAQFDVDEMKIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELR 80 (529)
Q Consensus 1 ~~~~~~l~~~r~~~~f~~~~m~~~~~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g 80 (529)
|.|++||++||++++||+++|..++.+++||.++|+++++|+.++|.|........+..+.+...+.....+.....++|
T Consensus 1 ~~~~~~l~~er~~~~f~~~~l~~~~~~~~e~~~lr~~vr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~p~e~G 80 (659)
T 1w07_A 1 MEGIDHLADERNKAEFDVEDMKIVWAGSRHAFEVSDRIARLVASDPVFEKSNRARLSRKELFKSTLRKCAHAFKRIIELR 80 (659)
T ss_dssp -CCCCTTHHHHTTCSSCHHHHHHHHHSSHHHHHHHHHHHHHHHTCGGGCCTTTTSSCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCchHHHHHHHccCCCCHHHHHHHHCCChHHHHHHHHHHHHHhcCcccccCCccCCChHHHHHHHHHHHHHHHHhHHHhC
Confidence 78899999999999999999999999889999999999999999998854322334555444443332222222233455
Q ss_pred CCHHHHhHhhhhcCCcchhhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCC
Q 009669 81 LSEEEASMLRSSVDEPAFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTD 160 (529)
Q Consensus 81 ~~~~~gg~~~~~~~~~~~~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~ 160 (529)
+...+.......++.+.++.+|..+++++|..+||++||++|||++++|++++|+|+|||+||||+.+++|+|++|+++|
T Consensus 81 ~~~~~~~~v~e~~~~~~~~~~~~~l~~~~l~~~Gt~eqk~~~L~~i~~Ge~~~~~a~TEp~~GSd~~~l~TtA~~d~~~~ 160 (659)
T 1w07_A 81 LNEEEAGRLRHFIDQPAYVDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATLDPKTD 160 (659)
T ss_dssp CCHHHHHHHHHHHCCCCHHHHHHHTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTT
T ss_pred CCchHHHHHHHHhccchhhhhHHhHHHHHHHHcCCHHHHHHHhhHHhcCCEEEEEEecCCCCCCCcccceeEEEEcCCCC
Confidence 44322222223345555578888899999999999999999999999999999999999999999999999999998779
Q ss_pred eEEEecCCCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcc
Q 009669 161 EFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNG 240 (529)
Q Consensus 161 ~~vLntp~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~ 240 (529)
+|+||||+++|+|+||+|++..||+++|+|+++.+++++|+++|+||+||+++|.+.|||+++++|+|+|..++++++++
T Consensus 161 g~vLntP~~~G~K~~is~~a~~Ad~~lV~Ar~~~~~~~~G~~~flVp~r~~~~~~~~pGV~v~~~~~~~G~~~~~g~~~~ 240 (659)
T 1w07_A 161 EFVIHTPTQTASKWWPGGLGKVSTHAVVYARLITNGKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNG 240 (659)
T ss_dssp EEEEECCSGGGSEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCBSSSSGGGGSCCE
T ss_pred EEEEcCCCCCeEEEeecCCCCCCCEEEEEEEECCCCCCCCeEEEEEEccccCCCCCCCCeEEecCccCccccccCCCCce
Confidence 99999999999999999866899999999999876667899999999999999999999999999999884446889999
Q ss_pred eEEecceecCcccccccccccCCCCceecc-CchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCC
Q 009669 241 VLRFEHVRIPRNQMLMRVSQVTREGKYVQS-NVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGG 319 (529)
Q Consensus 241 ~v~fd~vrVP~~~lL~~~~~v~~~g~~~~~-~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~ 319 (529)
+|.|+||+||++++|+++++|.++|.++.+ ..++ ..+..|..+|+.+++.++|+++++++++++|+++|+|||++++.
T Consensus 241 ~v~fd~VrVP~~~lLg~~~~v~~~g~~~~~~~~~~-~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~ 319 (659)
T 1w07_A 241 FLMFDHVRIPRDQMLMRLSKVTREGEYVPSDVPKQ-LVYGTMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGAHNGG 319 (659)
T ss_dssp EEEESSEEEEGGGBCCSSEEECTTCCEEECSSCGG-GCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCC---C
T ss_pred EEEeccEEECHHHhcCCcCccCCCCceecCCccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCC
Confidence 999999999999999998888888888763 2222 44567788999999999999999999999999999999987777
Q ss_pred CcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHh
Q 009669 320 PETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLC 399 (529)
Q Consensus 320 ~e~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~ 399 (529)
+|.||++||.+|++|+++++.+++++++++++++.+++.....+.++.....+.+..++++|+++++.+.+++++|+|+|
T Consensus 320 ~e~pi~~~q~vq~rLa~~~a~~~a~~~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~~a~aK~~at~~a~~~~~~a~q~~ 399 (659)
T 1w07_A 320 IETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTERLAASDFATLPEAHACTAGLKSLTTTATADGIEECRKLC 399 (659)
T ss_dssp CCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88899999999999999999999999999999998876655444333333346788999999999999999999999999
Q ss_pred ccccccCcCCHHHHhhhhcccccccccHHHHHHHHHHHHHHHHHHhcCCCCccccccccccchHHhhhcCCCccccccCC
Q 009669 400 GGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGRAEQLMQCHCGVQKAEDWLN 479 (529)
Q Consensus 400 GG~Gy~~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 479 (529)
||+||+++++++++|||++..++++|+|+++++++++.+++.+++..+|+++.++.+||.+.......+....+..++.|
T Consensus 400 GG~G~~~~~~l~r~~rda~~~~~~eG~~~v~~~~iar~lL~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 479 (659)
T 1w07_A 400 GGHGYLWCSGLPELFAVYVPACTYEGDNVVLQLQVARFLMKTVAQLGSGKVPVGTTAYMGRAAHLLQCRSGVQKAEDWLN 479 (659)
T ss_dssp GGGGGBGGGSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHHHTTTTTSCCCCGGGGGGGGHHHHTSCCCCCCSGGGGGC
T ss_pred cCcccccccCHHHHHHhcceeEEEeCChHHHHHHHHHHHHHHHHHHhcCCCCccHHHHHHhhhhhhccccccCchhhcCC
Confidence 99999999999999999999999999999999999999999998887777778899999887655443333334568999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHhhccceeeEE
Q 009669 480 PSAILEAFEARAIRMSVACAQNLSKFTNQEEGNLFILDIGSLKLFR 525 (529)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (529)
|++++++|++|+++++..+++++++. .+....||..++.+.+
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~~~ 521 (659)
T 1w07_A 480 PDVVLEAFEARALRMAVTCAKNLSKF----ENQEQGFQELLADLVE 521 (659)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTS----SSHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc----cCHHHHHHHHHHHHHH
Confidence 99999999999999999999999875 4577788887765543
No 3
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=3.2e-57 Score=495.98 Aligned_cols=421 Identities=19% Similarity=0.222 Sum_probs=332.1
Q ss_pred ChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhhc---------
Q 009669 28 SRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSV--------- 93 (529)
Q Consensus 28 ~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~--------- 93 (529)
++||.++++++++|+.++.... .++...........+|+.+.+.|| |+++||.+.+..
T Consensus 29 ~~e~~~l~~~~~~~~~~~~~p~--------~~~~~~~~~~~p~~~~~~l~e~Gl~~l~vPee~GG~g~~~~~~~~v~eel 100 (577)
T 2z1q_A 29 DESVKEIARTTRTFVEREVLPL--------LERMEHGELELNVPLMRKAGELGLLAIDVPEEYGGLDLPKVISTVVAEEL 100 (577)
T ss_dssp CHHHHHHHHHHHHHHHTTTHHH--------HHHHHTTCGGGHHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhccCchh--------HHhhhcccCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHH
Confidence 5788999999999998643100 111110001234678999999997 688888654332
Q ss_pred C--Cc--chhhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEecCCC
Q 009669 94 D--EP--AFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPTL 169 (529)
Q Consensus 94 ~--~~--~~~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLntp~~ 169 (529)
. .+ ..+.+|..++...|..+||++||++|||++++|++++|+++|||++|||+.+++|+|+++++|++|+||
T Consensus 101 ~~~~s~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~l~~G~~~~a~alTEp~aGSD~~~~~t~A~~~~dG~~~vLn---- 176 (577)
T 2z1q_A 101 SGSGGFSVTYGAHTSIGTLPLVYFGTEEQKRKYLPKLASGEWIAAYCLTEPGSGSDALAAKTRATLSEDGKHYILN---- 176 (577)
T ss_dssp TTSCTHHHHHHHHHTTTTHHHHHHCCHHHHHTTHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEE----
T ss_pred hhcccHHHHHhhhHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeeEEEEeCCCCEEEEE----
Confidence 1 11 224556666677899999999999999999999999999999999999999999999997778899999
Q ss_pred CceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEecceec
Q 009669 170 TSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRI 249 (529)
Q Consensus 170 ~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~fd~vrV 249 (529)
|+|+||+| +..||+++|+|+++ + .|+++|+|| .+.|||++++.++++| +++++++.|.|+||+|
T Consensus 177 -G~K~~it~-a~~Ad~~~V~Ar~~--g--~gis~flVp-------~~~pGv~v~~~~~~~G---~~~~~~~~v~fddv~V 240 (577)
T 2z1q_A 177 -GVKQWISN-AGFAHLFTVFAKVD--G--EHFTAFLVE-------RDTPGLSFGPEEKKMG---IKASSTRQVILEDVKV 240 (577)
T ss_dssp -EEEEEEET-TTTCSEEEEEEEET--T--TEEEEEEEE-------TTCTTEEECCCCCBSS---CTTSCEEEEEEEEEEE
T ss_pred -EEeeCCCC-CCccCEEEEEEEeC--C--CeeEEEEEe-------CCCCCeEecCCCCCCC---CCCCceeEEEecceec
Confidence 99999999 88999999999974 2 589999999 7899999999999999 9999999999999999
Q ss_pred CcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcccccchHH
Q 009669 250 PRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKT 329 (529)
Q Consensus 250 P~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~~~q~ 329 (529)
|.+++||. .|.++. .....+..+|+.+++.++|+++++++++++|+++|+|||+ ||++||.
T Consensus 241 P~~~llg~------~g~g~~------~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~-------pi~~~q~ 301 (577)
T 2z1q_A 241 PVENVLGE------IGKGHK------IAFNVLNVGRYKLGAGAVGGAKRALELSAQYATQRVQFGR-------PIGRFGL 301 (577)
T ss_dssp EGGGEESC------TTCTHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSSS-------BGGGSHH
T ss_pred cHHHccCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCC-------chhhhHH
Confidence 99999984 566554 5667788899999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC------hhhHHHHHHhHHHHHHHHHHHHHHHHHHHhcccc
Q 009669 330 QQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFST------LPEAHACTAGLKSLTTTATADGIEECRKLCGGHG 403 (529)
Q Consensus 330 ~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~G 403 (529)
+|++|++|.+.+++++++++++++.++.... ++... .++.+..++++|+++++.+.+++++|+|+|||+|
T Consensus 302 vq~~La~~~~~~~aar~~~~~aa~~~d~~~~----~~~~~~~~~~~~~~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G 377 (577)
T 2z1q_A 302 IQQKLGEMASRIYAAESAVYRTVGLIDEALL----GKKGPEAVMAGIEEYAVEASIIKVLGSEVLDYVVDEGVQIHGGYG 377 (577)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCCSHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc----ccccchhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCee
Confidence 9999999999999999999999888765321 01000 1245677899999999999999999999999999
Q ss_pred ccCcCCHHHHhhhhcccccccccHHHHHHHHHHHHHHHHHHhcCCCCccccccccccch-HHhhhcCCCccccccCChHH
Q 009669 404 YLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGRAE-QLMQCHCGVQKAEDWLNPSA 482 (529)
Q Consensus 404 y~~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~ 482 (529)
|+++++++++|||++..++++|+|++++.++++.+++...+ +. .....++.+.. .+.+ +. ....+.+...
T Consensus 378 ~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ia~~~l~~~~~---~~--l~~~~~~~~~~~~~~~--~~--~~~~l~~~~~ 448 (577)
T 2z1q_A 378 YSQEYPIERAYRDARINRIFEGTNEINRLLIPGMLLRRALK---GQ--LPLMQAAQRLQKELLE--PS--FEEPEDLELH 448 (577)
T ss_dssp GBTTSHHHHHHHHHGGGGTTTSCHHHHHHHTTGGGSCC------------------------------------CCHHHH
T ss_pred ecCCChHHHHHhhCcceeeeCcHHHHHHHHHHHHHHHHHhh---cC--CcHHHHHHHHHHHHcC--CC--CChhHHHHHH
Confidence 99999999999999999999999999999999999866432 11 11124554432 1211 10 1224445667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009669 483 ILEAFEARAIRMSVACAQNLSKFTNQ 508 (529)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (529)
++..+..+...++..+..++.+..+.
T Consensus 449 ~l~~~~~~~~~~~~~~~~~~~~~l~~ 474 (577)
T 2z1q_A 449 QVQNLKKLALMVAGLAVQKYGQGVEE 474 (577)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 88888888888888888777665543
No 4
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=3.4e-56 Score=488.12 Aligned_cols=369 Identities=21% Similarity=0.270 Sum_probs=312.3
Q ss_pred CChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHH-HHHHHHHHHHHHHHcCC-----CHHHHhHhhhhcC------
Q 009669 27 GSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKN-TLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------ 94 (529)
Q Consensus 27 ~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~~------ 94 (529)
-++||.++++++++|+.++.... .+..+. ......++|+.+.++|| |+++||.+.+...
T Consensus 33 lt~eq~~l~~~vr~f~~~~~~p~---------~~~~d~~~~~~~~~~~~~l~e~Gl~gl~vPee~GG~G~~~~~~~~v~E 103 (597)
T 3owa_A 33 FSSEHKMIAKTTEDFIVNEVLPE---------LEYLEQHEFDRSVRLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAE 103 (597)
T ss_dssp CCHHHHHHHHHHHHHHHHHTGGG---------HHHHTTTCHHHHHHHHHHHHHTTTTCTTSCGGGTCCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCchh---------HHHHHhcCCcCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHH
Confidence 45789999999999998753211 111111 11345678999999997 6888887654321
Q ss_pred ---C----cchhhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEecC
Q 009669 95 ---E----PAFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (529)
Q Consensus 95 ---~----~~~~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLntp 167 (529)
. ..++..|..+....|..+|+++||++|||++++|+.++|+++|||++|||+.+++|+|+++++|++|+||
T Consensus 104 el~~~~~~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~la~Ge~~~a~alTEp~aGSD~~~~~T~A~~~~dG~~yvLn-- 181 (597)
T 3owa_A 104 KFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLN-- 181 (597)
T ss_dssp HHGGGTHHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEE--
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhCCCcceeeEecCCCCCCCcccceeEEEEeCCCCEEEEe--
Confidence 1 1234456556666788899999999999999999999999999999999999999999998778899999
Q ss_pred CCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEecce
Q 009669 168 TLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHV 247 (529)
Q Consensus 168 ~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~fd~v 247 (529)
|+|+||+| +..||+++|+|+++. .|+++|+|| .+.|||++.+.|+++| ++++++++|.|+||
T Consensus 182 ---G~K~~is~-a~~Ad~~lV~Art~~----~g~s~flV~-------~~~pGv~v~~~~~~~G---lrgs~t~~v~fddV 243 (597)
T 3owa_A 182 ---GEKQWITN-SAFADVFIVYAKIDG----EHFSAFIVE-------KDYAGVSTSPEEKKMG---IKCSSTRTLILEDA 243 (597)
T ss_dssp ---EEEEEEET-TTTCSEEEEEEEETT----TEEEEEEEE-------TTSTTEEECCCCCBSS---CTTSCEEEEEEEEE
T ss_pred ---eEEEEeCC-CccCCEEEEEEEeCC----CceEEEEEe-------CCCCCeEEeccccccc---CCCCCceEEEEece
Confidence 99999999 899999999999742 479999999 8899999999999999 99999999999999
Q ss_pred ecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcccccch
Q 009669 248 RIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDY 327 (529)
Q Consensus 248 rVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~~~ 327 (529)
+||.+++||. .|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++|
T Consensus 244 ~VP~~~lLG~------~g~G~~------~~~~~l~~~R~~~aa~~lG~a~~al~~a~~ya~~R~qfG~-------pi~~~ 304 (597)
T 3owa_A 244 LVPKENLLGE------IGKGHI------IAFNILNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQ-------PIARF 304 (597)
T ss_dssp EEEGGGEESS------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGS
T ss_pred eecHHHhcCc------ccchHH------HHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc-------ccccc
Confidence 9999999984 555544 5677888999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CC-----CChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Q 009669 328 KTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQAN--DF-----STLPEAHACTAGLKSLTTTATADGIEECRKLCG 400 (529)
Q Consensus 328 q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~G 400 (529)
|.+|++|++|.+.+++++++++++++.+++........ +. ....+.+..++++|+++++.+.+++++|+|+||
T Consensus 305 q~vq~~LA~m~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~aK~~ase~a~~v~~~a~qi~G 384 (597)
T 3owa_A 305 PLIQEKLANMAAKTYAAESSVYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHG 384 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999887543110000 00 000134667899999999999999999999999
Q ss_pred cccccCcCCHHHHhhhhcccccccccHHHHHHHHHHHHHHHHH
Q 009669 401 GHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVS 443 (529)
Q Consensus 401 G~Gy~~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~~ 443 (529)
|+||+++++++++|||++...+++|+|++++..+++.+++.+.
T Consensus 385 G~G~~~e~~ler~~RDar~~~i~eGt~ei~r~~Ia~~ll~~~~ 427 (597)
T 3owa_A 385 GYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAM 427 (597)
T ss_dssp GGGGBTTSHHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHHHH
T ss_pred CccccccChHHHHHHHhhhhheeCcHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999998864
No 5
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=100.00 E-value=2.1e-56 Score=470.14 Aligned_cols=358 Identities=19% Similarity=0.258 Sum_probs=306.0
Q ss_pred HcCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhhcC-----
Q 009669 25 WAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD----- 94 (529)
Q Consensus 25 ~~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~~----- 94 (529)
+.-++||.++++++++|++++.... ....+.......++|+.+.+.|| |+++||.+.++..
T Consensus 27 ~~~~~e~~~l~~~~r~~~~~~~~p~---------~~~~d~~~~~~~~~~~~l~e~Gl~~l~~P~e~GG~g~~~~~~~~v~ 97 (404)
T 2jif_A 27 QTFTDEEMMIKSSVKKFAQEQIAPL---------VSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVI 97 (404)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHTGGG---------HHHHHHHTCCCHHHHHHHHHTTTTSSSSCGGGTCCCCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhCccc---------HHHHhhcCCCCHHHHHHHHHCCCCccCCchhhCCCCCCHHHHHHHH
Confidence 3456899999999999998754210 11122222234578999999997 5788886644321
Q ss_pred -------Ccch--hhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEe
Q 009669 95 -------EPAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIH 165 (529)
Q Consensus 95 -------~~~~--~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLn 165 (529)
.+.+ +.+|..++...|..+|+++||++|||++.+|+ ++|+++|||++|||+..++|+|+++ +|+|+||
T Consensus 98 eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~g~-~~~~a~tEp~~Gsd~~~~~t~A~~~--g~g~vln 174 (404)
T 2jif_A 98 EELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSFCLSEAGAGSDSFALKTRADKE--GDYYVLN 174 (404)
T ss_dssp HHHHTTCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHHTC-CEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEE
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCC-cceEEecCCCCCCChhhceeEEEEe--CCEEEEE
Confidence 1222 33455567788999999999999999999985 7999999999999999999999998 8999999
Q ss_pred cCCCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEec
Q 009669 166 SPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFE 245 (529)
Q Consensus 166 tp~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~fd 245 (529)
|+|+|++| +..||+++|+|+++.+++..|+++|+|| .+.|||++.+.|+++| ++++++++|.||
T Consensus 175 -----G~K~~is~-a~~Ad~~~v~ar~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~fd 238 (404)
T 2jif_A 175 -----GSKMWISS-AEHAGLFLVMANVDPTIGYKGITSFLVD-------RDTPGLHIGKPENKLG---LRASSTCPLTFE 238 (404)
T ss_dssp -----EEEEEEET-TTTCSEEEEEEESCGGGGGGGEEEEEEE-------TTCTTEEECCCCCBSS---CTTSCEEEEEEE
T ss_pred -----eEEEeecC-CcccCEEEEEEEeCCCCCCCceEEEEEe-------cCCCCeEeccCccccc---CCCCceEEEEEc
Confidence 99999999 8999999999998655455689999999 7889999999999999 999999999999
Q ss_pred ceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCccccc
Q 009669 246 HVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVI 325 (529)
Q Consensus 246 ~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~ 325 (529)
||+||.+++|+. .|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||+
T Consensus 239 ~v~Vp~~~~lg~------~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~-------~i~ 299 (404)
T 2jif_A 239 NVKVPEANILGQ------IGHGYK------YAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGK-------RLF 299 (404)
T ss_dssp EEEEEGGGEESS------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGG
T ss_pred cEEECHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCC-------ccc
Confidence 999999999984 455443 4566778899999999999999999999999999999999 999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccc
Q 009669 326 DYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYL 405 (529)
Q Consensus 326 ~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~ 405 (529)
+||.+|++|++|.+.+++++.+++++++.++. +. +....++++|+++++.+.++++.|+|+|||+||+
T Consensus 300 ~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~-------g~-----~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~G~~ 367 (404)
T 2jif_A 300 DFQGLQHQVAHVATQLEAARLLTYNAARLLEA-------GK-----PFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYT 367 (404)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGB
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CC-----ccHHHHHHHHHHHHHHHHHHHHHHHHhcCcceec
Confidence 99999999999999999999999999876642 11 1234578999999999999999999999999999
Q ss_pred CcCCHHHHhhhhcccccccccHHHHHHHHHHHHHHH
Q 009669 406 CSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKT 441 (529)
Q Consensus 406 ~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~~ 441 (529)
++++++++|||++...+++|++++++..|++.+++.
T Consensus 368 ~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~~~~ 403 (404)
T 2jif_A 368 KDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHIDAE 403 (404)
T ss_dssp TTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHhhccceeecCCHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999875
No 6
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=100.00 E-value=9.4e-56 Score=462.75 Aligned_cols=358 Identities=20% Similarity=0.188 Sum_probs=306.0
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhhcC------
Q 009669 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------ 94 (529)
Q Consensus 26 ~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~~------ 94 (529)
.-++||.++++++++|+.++... .....+....+...+|+.+.+.|| |+++||.+.++..
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~---------~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 76 (387)
T 2d29_A 6 EEGAEERQVLGPFREFLKAEVAP---------GAAERDRTGAFPWDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVE 76 (387)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTGG---------GHHHHHHHCCCCHHHHHHHHTTTGGGSSSCGGGTCCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcch---------hHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHH
Confidence 34589999999999999754311 011122222234578999999887 6788886544321
Q ss_pred ------Ccch--hhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEec
Q 009669 95 ------EPAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHS 166 (529)
Q Consensus 95 ------~~~~--~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLnt 166 (529)
.+.+ +.+|..++...|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 77 el~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln- 153 (387)
T 2d29_A 77 AIAYYDGALALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKV--EGGWRLN- 153 (387)
T ss_dssp HHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTSSSCEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEE-
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEeCCCCCCCCHhhCceEEEEe--CCEEEEE-
Confidence 1333 2345457788899999999999999999999999999999999999999999999998 8899999
Q ss_pred CCCCceeeccCCCCCCCcEEEEEEEEecCC----CCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceE
Q 009669 167 PTLTSSKWWPGGLGKVSTHAVVYARLITDG----QDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVL 242 (529)
Q Consensus 167 p~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g----~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v 242 (529)
|+|+|++| +..||+++|+|+++.++ +..|+++|+|| .+.|||++.+.|+++| ++++++++|
T Consensus 154 ----G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~g---~~~~~~~~v 218 (387)
T 2d29_A 154 ----GTKQFITQ-GSVAGVYVVMARTDPPPSPERKHQGISAFAFF-------RPERGLKVGRKEEKLG---LTASDTAQL 218 (387)
T ss_dssp ----EEEEEEET-TTTCSEEEEEEECSCCSCGGGTTTTEEEEEEE-------CCSSSEEECCCCCCSS---CTTSCEEEE
T ss_pred ----eEEeccCC-CCcCCEEEEEEEeCCccccCCCCCCeEEEEEe-------CCCCCeeccCcccccC---CCCCCeeEE
Confidence 99999999 89999999999986443 45689999999 7889999999999999 999999999
Q ss_pred EecceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcc
Q 009669 243 RFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPET 322 (529)
Q Consensus 243 ~fd~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~ 322 (529)
.||||+||.+++|+. .|.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+
T Consensus 219 ~f~~v~Vp~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~------- 279 (387)
T 2d29_A 219 ILEDLFVPEEALLGE------RGKGFY------DVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGR------- 279 (387)
T ss_dssp EEEEEEEEGGGEESS------TTBHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------
T ss_pred EEeeEEECHHHcCCC------CCccHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCc-------
Confidence 999999999999984 455443 5566778899999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccc
Q 009669 323 QVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGH 402 (529)
Q Consensus 323 ~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~ 402 (529)
||++||.+||+|++|.+.+++++.+++++++.++. +. +....++++|+++++.+.++++.|+|+|||+
T Consensus 280 ~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~-------g~-----~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~ 347 (387)
T 2d29_A 280 PIAEFEGVSFKLAEAATELEAARLLYLKAAELKDA-------GR-----PFTLEAAQAKLFASEAAVKACDEAIQILGGY 347 (387)
T ss_dssp EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred chHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----CchHHHHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 99999999999999999999999999999887652 11 1345688999999999999999999999999
Q ss_pred cccCcCCHHHHhhhhcccccccccHHHHHHHHHHHHHHH
Q 009669 403 GYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKT 441 (529)
Q Consensus 403 Gy~~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~~ 441 (529)
||+++++++++|||++...+++|++++++..+++.+++.
T Consensus 348 g~~~~~~~~r~~Rda~~~~i~~G~~~i~~~~ia~~~l~~ 386 (387)
T 2d29_A 348 GYVKDYPVERYWRDARLTRIGEGTSEILKLVIARRLLEA 386 (387)
T ss_dssp GGSTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHT
T ss_pred ecCCCChHHHHHHHhhCccccCCHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999998863
No 7
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=7.8e-56 Score=462.07 Aligned_cols=355 Identities=21% Similarity=0.292 Sum_probs=305.0
Q ss_pred CChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhhcC-------
Q 009669 27 GSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------- 94 (529)
Q Consensus 27 ~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~~------- 94 (529)
-++||.++++.+++|+.+.... .....+....+...+|+.+.+.|| |+++||.+.++..
T Consensus 5 ~~~~~~~l~~~~~~~~~~~~~~---------~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~ee 75 (379)
T 1ukw_A 5 LTEEQRQLQALARRFAKEVILP---------VAQEYDEKEEVPWPVIEKLHEVGLLNAIIPEEYGGMGLKMLDEVIVGEE 75 (379)
T ss_dssp CCHHHHHHHHHHHHHHHHTTGG---------GHHHHHHHTCCCHHHHHHHHHTTCTTTTSCGGGTSCCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCch---------hHHHHhhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHH
Confidence 3579999999999999765321 011122222234578999999997 5788886644321
Q ss_pred -----Ccch--hhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEecC
Q 009669 95 -----EPAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (529)
Q Consensus 95 -----~~~~--~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLntp 167 (529)
.+.+ +.+| .++...|..+|+++||++|||++.+|++++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 76 l~~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln-- 150 (379)
T 1ukw_A 76 LAYACMGIYTIPMAS-DLGITPVLLAGTEEQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQ--GDHYVLN-- 150 (379)
T ss_dssp HHHHCHHHHHHHHHH-HHHHHHHHHHCCHHHHHHHHGGGTSSSCEEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE--
T ss_pred HHHhCchHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcChhhCeEEEEEe--CCEEEEE--
Confidence 1323 3344 47778899999999999999999999999999999999999999999999998 8999999
Q ss_pred CCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEecce
Q 009669 168 TLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHV 247 (529)
Q Consensus 168 ~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~fd~v 247 (529)
|+|+|++| +..||+++|+|+++.++++.|+++|+|| .+.|||++.+.|+++| ++++++++|.||||
T Consensus 151 ---G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~g~~~flV~-------~~~~Gv~v~~~~~~~G---~~~~~~~~v~fd~v 216 (379)
T 1ukw_A 151 ---GTKMWISN-GGEAEWVVVFATVNPELRHKGVVALVVE-------RGTPGFKAIKIHGKMG---QRASGTYELVFEDV 216 (379)
T ss_dssp ---EEEEEEET-TTTEEEEEEEEESCGGGGGGGEEEEEEE-------TTCTTEEEEECCCCSS---CTTSCEEEEEEEEE
T ss_pred ---EEEecccC-CCcCCEEEEEEEcCCCCCCCceEEEEEe-------CCCCCeEecCcccccc---CCCCCeeEEEEeeE
Confidence 99999999 8999999999998654455789999999 7889999999999999 99999999999999
Q ss_pred ecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcccccch
Q 009669 248 RIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDY 327 (529)
Q Consensus 248 rVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~~~ 327 (529)
+||.+++|+. .|.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+ ||++|
T Consensus 217 ~Vp~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fg~-------~i~~~ 277 (379)
T 1ukw_A 217 KVPVENRLGE------EGEGFK------IAMQTLNKTRIPVAAGSVGVARRALDEARKYAKEREAFGE-------PIANF 277 (379)
T ss_dssp EEEGGGEESC------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSS-------BGGGS
T ss_pred EecHHhcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc-------chhhh
Confidence 9999999984 454443 4566778899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccCc
Q 009669 328 KTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCS 407 (529)
Q Consensus 328 q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~~~ 407 (529)
|.+||+|++|.+.+++++.+++++++.++. +. +....++++|.++++.+.++++.|+|+|||+||+++
T Consensus 278 q~vq~~la~~~~~~~aar~~~~~aa~~~d~-------g~-----~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~ 345 (379)
T 1ukw_A 278 QAIQFKLVDMLIGIETARMYTYYAAWLADQ-------GL-----PHAHASAIAKAYASEIAFEAANQAIQIHGGYGYVRE 345 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----chHHHHHHHHHHHHHHHHHHHHHHHHhhCCeecCCC
Confidence 999999999999999999999999887752 11 234568899999999999999999999999999999
Q ss_pred CCHHHHhhhhcccccccccHHHHHHHHHHHHHH
Q 009669 408 SGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 440 (529)
Q Consensus 408 ~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 440 (529)
++++++|||++...+++|++++++..+++.+++
T Consensus 346 ~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 378 (379)
T 1ukw_A 346 FPVEKLLRDVKLNQIYEGTNEIQRLIIARHILA 378 (379)
T ss_dssp SSHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred ChHHHHHHHhcCceecCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999998874
No 8
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=100.00 E-value=1e-55 Score=463.00 Aligned_cols=361 Identities=21% Similarity=0.255 Sum_probs=308.6
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhhcC------
Q 009669 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------ 94 (529)
Q Consensus 26 ~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~~------ 94 (529)
.-++||.++++++++|+.++.... ....+........+|+.+.+.|| |+++||.+.++..
T Consensus 5 ~~~~~~~~l~~~~r~~~~~~~~~~---------~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 75 (391)
T 2vig_A 5 ELPETHQMLLQTCRDFAEKELFPI---------AAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAME 75 (391)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTCCCHHHHHHHHHHTTTSTTSCGGGTSCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCccc---------HHHHHhcCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHH
Confidence 345899999999999997642110 11122222234568999999987 6788886644321
Q ss_pred ------Ccc--hhhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEec
Q 009669 95 ------EPA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHS 166 (529)
Q Consensus 95 ------~~~--~~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLnt 166 (529)
.+. .+.+|..++...|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 76 el~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln- 152 (391)
T 2vig_A 76 EISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAE--GDSWVLN- 152 (391)
T ss_dssp HHHHHCHHHHHHHHHHHHTTHHHHHHHCCHHHHHHHTGGGSSSSCCEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEE-
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCCCcccceeEEEEe--CCEEEEe-
Confidence 111 23455447788899999999999999999999999999999999999999999999998 8899999
Q ss_pred CCCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEecc
Q 009669 167 PTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEH 246 (529)
Q Consensus 167 p~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~fd~ 246 (529)
|+|+|++| +..||+++|+|+++.++++.|+++|+|| .+.|||++.+.|+++| ++++++++|.|||
T Consensus 153 ----G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~g---~r~~~~~~v~fd~ 217 (391)
T 2vig_A 153 ----GTKAWITN-AWEASAAVVFASTDRALQNKSISAFLVP-------MPTPGLTLGKKEDKLG---IRGSSTANLIFED 217 (391)
T ss_dssp ----EEEEEEET-TTTCSEEEEEEECCSSSTTSCEEEEEEE-------SSCTTEEECCCCCBSS---CTTSCEEEEEEEE
T ss_pred ----eEEEeecC-CCcCCEEEEEEEeCCCCCCCceEEEEEe-------CCCCCeEecCcccccc---CCCCCeeEEEECc
Confidence 99999999 8999999999998654345689999999 7889999999999999 9999999999999
Q ss_pred eecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcccccc
Q 009669 247 VRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVID 326 (529)
Q Consensus 247 vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~~ 326 (529)
|+||.+++|+. .|.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+ ||++
T Consensus 218 v~Vp~~~~lg~------~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~~ 278 (391)
T 2vig_A 218 CRIPKDSILGE------PGMGFK------IAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGA-------PLTK 278 (391)
T ss_dssp EEEEGGGEESS------TTBHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGG
T ss_pred EEECHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCC-------cchh
Confidence 99999999984 555543 4566788899999999999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccC
Q 009669 327 YKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLC 406 (529)
Q Consensus 327 ~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~~ 406 (529)
||.+||+|++|.+.+++++.+++++++.++. +. .....++++|+++++.+.++++.|+|+|||+||++
T Consensus 279 ~q~v~~~la~~~~~~~aar~~~~~aa~~~~~-------g~-----~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~ 346 (391)
T 2vig_A 279 LQVIQFKLADMALALESARLLTWRAAMLKDN-------KK-----PFIKEAAMAKLAASEAATAISHQAIQILGGMGYVT 346 (391)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----CchHHHHHHHHHHHHHHHHHHHHHHHhhCCeEecC
Confidence 9999999999999999999999999887642 11 12456889999999999999999999999999999
Q ss_pred cCCHHHHhhhhcccccccccHHHHHHHHHHHHHHHHHH
Q 009669 407 SSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVSQ 444 (529)
Q Consensus 407 ~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~~~ 444 (529)
+++++++|||++...+++|++++++..+++.+++.|+.
T Consensus 347 ~~~~~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~~~~ 384 (391)
T 2vig_A 347 EMPAERHYRDARITEIYEGTSEIQRLVIAGHLLRSYRS 384 (391)
T ss_dssp TSSHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHC
T ss_pred CChHHHHHHHhhcceeecCHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999999999999999999998754
No 9
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=2e-56 Score=468.68 Aligned_cols=363 Identities=22% Similarity=0.230 Sum_probs=303.1
Q ss_pred HHHHHHHHcCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhh
Q 009669 18 VDEMKIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSS 92 (529)
Q Consensus 18 ~~~m~~~~~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~ 92 (529)
+.-|++.+ ++||.++++++++|++++.... ....+....+..++|+.+.+.|| |+++||.+.++
T Consensus 12 p~~m~~~~--~~e~~~l~~~~r~~~~~~~~~~---------~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~ 80 (393)
T 3pfd_A 12 PSFELFQL--PEEHIALREAIRALAEKEIAPY---------AAEVDEKARFPEEALAALNSSGFSAIHVPEEYGGQGADS 80 (393)
T ss_dssp ------------CHHHHHHHHHHHHHHHTGGG---------HHHHHHTTCCCHHHHHHHHHHTCSCTTSCGGGTCCCCCH
T ss_pred CcccCCCC--CHHHHHHHHHHHHHHHHhCchH---------HHHHhhhCCCCHHHHHHHHHCCCCCCCCChhHCCCCCCH
Confidence 33466644 4689999999999997653211 11122222244678999999987 68888876543
Q ss_pred cC------------Ccchh--hhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCC
Q 009669 93 VD------------EPAFT--DLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQ 158 (529)
Q Consensus 93 ~~------------~~~~~--~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~ 158 (529)
.. .+.++ ..| .++...|..+|+++||++|||++.+|++++|+++|||++|||+.+++|+|+++
T Consensus 81 ~~~~~v~eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~-- 157 (393)
T 3pfd_A 81 VATCIVIEEVARVDCSASLIPAVN-KLGTMGLILRGSEELKKQVLPAVASGEAMASYALSEREAGSDAASMRTRAVAD-- 157 (393)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH-HHTTHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEE--
T ss_pred HHHHHHHHHHHhhCchHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCcccCeeEEEEc--
Confidence 21 13333 223 35566788999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCC
Q 009669 159 TDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMD 238 (529)
Q Consensus 159 ~~~~vLntp~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~ 238 (529)
+|+|+|| |+|+|++| +..||+++|+|+++.+++..|+++|+|| .+.|||++.+.|+++| +++++
T Consensus 158 ~~g~~ln-----G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~ 221 (393)
T 3pfd_A 158 GDDWILN-----GSKCWITN-GGKSTWYTVMAVTDPDKGANGISAFMVH-------KDDEGFTVGPKERKLG---IKGSP 221 (393)
T ss_dssp TTEEEEE-----EEEEEEET-TTTCSEEEEEEESCGGGGGGGEEEEEEE-------TTSTTEEEEEECCBSS---CTTSC
T ss_pred CCEEEEe-----eEEEEecC-CcccCEEEEEEEeCCCCCCCceEEEEEE-------CCCCCeEecCCCCccc---CCCCC
Confidence 8899999 99999999 8999999999998766556789999999 7889999999999999 99999
Q ss_pred cceEEecceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCC
Q 009669 239 NGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNG 318 (529)
Q Consensus 239 ~~~v~fd~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~ 318 (529)
+++|.||||+||.+++|+. .|.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+
T Consensus 222 ~~~v~fddv~Vp~~~~lg~------~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~--- 286 (393)
T 3pfd_A 222 TTELYFENCRIPGDRIIGE------PGTGFK------TALATLDHTRPTIGAQAVGIAQGALDAAIAYTKERKQFGR--- 286 (393)
T ss_dssp EEEEEEEEEEEEGGGEESS------TTCHHH------HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE---
T ss_pred ceEEEEccEEEcHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCc---
Confidence 9999999999999999984 555443 5567788899999999999999999999999999999999
Q ss_pred CCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 009669 319 GPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKL 398 (529)
Q Consensus 319 ~~e~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~ 398 (529)
||++||.+||+|++|.+.+++++.+++++++.+++. . ++....++++|+++++.+.++++.|+|+
T Consensus 287 ----~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~-------~----~~~~~~~~~aK~~a~~~a~~~~~~a~q~ 351 (393)
T 3pfd_A 287 ----PVSDNQGVQFMLADMAMKIEAARLMVYSAAARAERG-------E----GDLGFISAASKCFASDVAMEVTTDAVQL 351 (393)
T ss_dssp ----EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------------CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------C----cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998877631 1 1234557899999999999999999999
Q ss_pred hccccccCcCCHHHHhhhhcccccccccHHHHHHHHHHHHHH
Q 009669 399 CGGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 440 (529)
Q Consensus 399 ~GG~Gy~~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 440 (529)
|||+||+++++++++|||++...+++|++++++..|++.+|+
T Consensus 352 ~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~ll~ 393 (393)
T 3pfd_A 352 FGGYGYTQDFPVERMMRDAKITQIYEGTNQIQRVVMSRALLR 393 (393)
T ss_dssp TGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHTC
T ss_pred hchhhccCCChHHHHHHhhcceeeecCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999864
No 10
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.6e-55 Score=460.41 Aligned_cols=356 Identities=20% Similarity=0.192 Sum_probs=305.8
Q ss_pred CChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHh---hhhcC----
Q 009669 27 GSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASML---RSSVD---- 94 (529)
Q Consensus 27 ~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~---~~~~~---- 94 (529)
-++||.++++++++|+.++.... ....+........+|+.+.+.|| |+++||.+ .++..
T Consensus 5 ~~~~~~~l~~~~~~~~~~~~~~~---------~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~v 75 (383)
T 1buc_A 5 LTDIQQDFLKLAHDFGEKKLAPT---------VTERDHKGIYDKELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYILA 75 (383)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTTT---------HHHHHHHTCCCHHHHHHHHTTSGGGTTSCGGGTCGGGGTCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCchh---------HHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCCCCHHHHHHH
Confidence 45789999999999997653211 11122222234568999999886 68888877 54421
Q ss_pred --------Ccch--hhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEE
Q 009669 95 --------EPAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVI 164 (529)
Q Consensus 95 --------~~~~--~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vL 164 (529)
.+.+ +.+|..++...|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|++++ +|+|+|
T Consensus 76 ~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~-~~g~~l 154 (383)
T 1buc_A 76 VEELAKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKND-DGTYTL 154 (383)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEECT-TSCEEE
T ss_pred HHHHHhhChHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEeCCCCCCCChhhCEeEEEEcC-CCEEEE
Confidence 1223 34455577888999999999999999999999999999999999999999999999864 578999
Q ss_pred ecCCCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEe
Q 009669 165 HSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRF 244 (529)
Q Consensus 165 ntp~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~f 244 (529)
| |+|+|++| +..||+++|+|+++.++++.|+++|+|| .+.|||++.+.|+++| +++++++.|.|
T Consensus 155 n-----G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~g~~~flV~-------~~~~Gv~v~~~~~~~g---~~~~~~~~v~f 218 (383)
T 1buc_A 155 N-----GSKIFITN-GGAADIYIVFAMTDKSKGNHGITAFILE-------DGTPGFTYGKKEDKMG---IHTSQTMELVF 218 (383)
T ss_dssp E-----EEEEEEET-TTTCSEEEEEEESCSSSSTTSEEEEEEE-------TTCTTEEEEEECCCSS---CTTSCEEEEEE
T ss_pred E-----EEEeccCC-CCcCCEEEEEEEeCCCCCCCceEEEEEE-------CCCCCeEecCcccccc---ccCCceeEEEE
Confidence 9 99999999 8999999999998755455789999999 7789999999999999 99999999999
Q ss_pred cceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcccc
Q 009669 245 EHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQV 324 (529)
Q Consensus 245 d~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i 324 (529)
|||+||.+++|+. .|.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+ ||
T Consensus 219 ~~v~Vp~~~~lg~------~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fG~-------~i 279 (383)
T 1buc_A 219 QDVKVPAENMLGE------EGKGFK------IAMMTLDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGK-------PL 279 (383)
T ss_dssp EEEEECGGGEESC------TTBHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EG
T ss_pred ccEEeCHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc-------ch
Confidence 9999999999984 455443 4566778899999999999999999999999999999999 99
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccccc
Q 009669 325 IDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGY 404 (529)
Q Consensus 325 ~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy 404 (529)
++||.+|++|++|.+.+++++.+++++++.++. +. +....++++|.++++.+.++++.|+|+|||+||
T Consensus 280 ~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~~~-------g~-----~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~ 347 (383)
T 1buc_A 280 CKFQSISFKLADMKMQIEAARNLVYKAACKKQE-------GK-----PFTVDAAIAKRVASDVAMRVTTEAVQIFGGYGY 347 (383)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGG
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----chHHHHHHHHHHHHHHHHHHHHHHHHhcCCeec
Confidence 999999999999999999999999999887753 11 234568899999999999999999999999999
Q ss_pred cCcCCHHHHhhhhcccccccccHHHHHHHHHHHHH
Q 009669 405 LCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLM 439 (529)
Q Consensus 405 ~~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll 439 (529)
+++++++++|||++...+++|++++++..+++.++
T Consensus 348 ~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l 382 (383)
T 1buc_A 348 SEEYPVARHMRDAKITQIYEGTNEVQLMVTGGALL 382 (383)
T ss_dssp STTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHhhcccccCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999875
No 11
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=7.5e-56 Score=464.55 Aligned_cols=359 Identities=18% Similarity=0.240 Sum_probs=305.7
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHH--HHHHHHHHcCC-----CHHHHhHhhhhcC----
Q 009669 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAA--YAWKRIIELRL-----SEEEASMLRSSVD---- 94 (529)
Q Consensus 26 ~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~--~~~~~l~~~g~-----~~~~gg~~~~~~~---- 94 (529)
.-++||.++++++++|+.++.... ....+....... ++|+.+.+.|| |+++||.+.+...
T Consensus 12 ~~~~e~~~l~~~~r~~~~~~~~~~---------~~~~d~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v 82 (394)
T 1ivh_A 12 GLSEEQRQLRQTMAKFLQEHLAPK---------AQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLV 82 (394)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTCCTTHHHHHHHHHHHTCTTTTSCGGGTCCCCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCChh---------HHHHHhcCCCCchHHHHHHHHHCCCCCCCCCcccCCCCCCHHHHHHH
Confidence 346899999999999997643211 111111111223 78999999887 6788886544321
Q ss_pred --------Ccc--hhhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEE
Q 009669 95 --------EPA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVI 164 (529)
Q Consensus 95 --------~~~--~~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vL 164 (529)
.+. .+.+|..++...|..+|+++||++|||++.+|++++|+++|||++|||+..++|+|+++ +|+|+|
T Consensus 83 ~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~l 160 (394)
T 1ivh_A 83 MEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKK--GNHYIL 160 (394)
T ss_dssp HHHHHHHCHHHHHHHHHHHTTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEEC--SSEEEE
T ss_pred HHHHHhhchhHHHHHHHhhHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCcCcccceEEEEEc--CCEEEE
Confidence 122 23445557888999999999999999999999999999999999999999999999998 889999
Q ss_pred ecCCCCceeeccCCCCCCCcEEEEEEEEecC--CCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceE
Q 009669 165 HSPTLTSSKWWPGGLGKVSTHAVVYARLITD--GQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVL 242 (529)
Q Consensus 165 ntp~~~G~K~~v~~l~~~A~~~lV~Ar~~~~--g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v 242 (529)
| |+|+|++| +..||+++|+|+++.+ +++.|+++|+|| .+.|||++.+.|+++| ++++++++|
T Consensus 161 n-----G~K~~vs~-~~~Ad~~~v~ar~~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v 224 (394)
T 1ivh_A 161 N-----GNKFWITN-GPDADVLIVYAKTDLAAVPASRGITAFIVE-------KGMPGFSTSKKLDKLG---MRGSNTCEL 224 (394)
T ss_dssp E-----EEEEEEET-GGGCSEEEEEEESCTTCSSGGGGEEEEEEE-------TTCTTEEECCCCCBSS---CTTSCEEEE
T ss_pred E-----eEEEeeCC-CCcCCEEEEEEEeCCcccCCCCCeEEEEEe-------CCCCCeEecccccccc---CCCCCeeEE
Confidence 9 99999999 8999999999998654 334689999999 7889999999999999 999999999
Q ss_pred EecceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcc
Q 009669 243 RFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPET 322 (529)
Q Consensus 243 ~fd~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~ 322 (529)
.||||+||.+++|+. .|.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+
T Consensus 225 ~fd~v~Vp~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~------- 285 (394)
T 1ivh_A 225 IFEDCKIPAANILGH------ENKGVY------VLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQ------- 285 (394)
T ss_dssp EEEEEEEEGGGEESC------TTCHHH------HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCEETTE-------
T ss_pred EECcEEEcHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc-------
Confidence 999999999999984 454443 5566778899999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccc
Q 009669 323 QVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGH 402 (529)
Q Consensus 323 ~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~ 402 (529)
||++||.+|++|++|.+.+++++.+++++++.++. +. +....++++|.++++.+.++++.|+|+|||+
T Consensus 286 ~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~-------g~-----~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~ 353 (394)
T 1ivh_A 286 KIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDE-------GH-----CTAKDCAGVILYSAECATQVALDGIQCFGGN 353 (394)
T ss_dssp EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred chhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CC-----cchHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999887642 11 1235578999999999999999999999999
Q ss_pred cccCcCCHHHHhhhhcccccccccHHHHHHHHHHHHHHHH
Q 009669 403 GYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTV 442 (529)
Q Consensus 403 Gy~~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~ 442 (529)
||+++++++++|||++...+++|++++++..+++.+++.|
T Consensus 354 g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~ll~~~ 393 (394)
T 1ivh_A 354 GYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRAFNADF 393 (394)
T ss_dssp GGBTTSTHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHTC-
T ss_pred cccCCchHHHHHHhcccccccCChHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999998764
No 12
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=100.00 E-value=1.5e-55 Score=462.64 Aligned_cols=359 Identities=21% Similarity=0.272 Sum_probs=305.3
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhhcC------
Q 009669 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------ 94 (529)
Q Consensus 26 ~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~~------ 94 (529)
.-++||.++++++++|+.++... .....+........+|+.+.+.|| |+++||.+.++..
T Consensus 15 ~~~~~~~~l~~~~r~~~~~~~~~---------~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 85 (396)
T 1egd_A 15 EFTEQQKEFQATARKFAREEIIP---------VAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISE 85 (396)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTHH---------HHHHHHHHCCCCHHHHHHHHHHTCSSTTSCGGGTSCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCch---------hHHHHHhhCCCCHHHHHHHHHCCCCCCCCchhhCCCCCCHHHHHHHHH
Confidence 34689999999999999764210 011112111233568999999987 5788886544321
Q ss_pred ------Ccchhh-hhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEecC
Q 009669 95 ------EPAFTD-LHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (529)
Q Consensus 95 ------~~~~~~-~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLntp 167 (529)
.+.++. .|..++...|..+|+++||++|||++.+|++++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 86 el~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln-- 161 (396)
T 1egd_A 86 ELAYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKK--GDEYIIN-- 161 (396)
T ss_dssp HHHHHCHHHHHHHHHHHHHTHHHHHHCCHHHHHHHHHHHHHSCCCEEEECCBTTBSSSGGGCCCEEEEC--SSEEEEE--
T ss_pred HHHhhCccHHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcchhhCeeEEEEe--CCEEEEE--
Confidence 133332 45556666788999999999999999999999999999999999999999999998 8899999
Q ss_pred CCCceeeccCCCCCCCcEEEEEEEEecCCCC---cceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEe
Q 009669 168 TLTSSKWWPGGLGKVSTHAVVYARLITDGQD---HGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRF 244 (529)
Q Consensus 168 ~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~---~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~f 244 (529)
|+|+|++| +..||+++|+|+++.+++. .|+++|+|| .+.|||++.+.|+++| ++++++++|.|
T Consensus 162 ---G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~f 227 (396)
T 1egd_A 162 ---GQKMWITN-GGKANWYFLLARSDPDPKAPANKAFTGFIVE-------ADTPGIQIGRKELNMG---QRCSDTRGIVF 227 (396)
T ss_dssp ---EEEEEEET-TTTCSEEEEEEECCCCTTSCGGGTEEEEEEE-------TTCTTEEECCCCCBSS---CTTSCEEEEEE
T ss_pred ---EEEEcccC-CcccCEEEEEEEeCCCCCCCCCCCeEEEEEe-------CCCCCeeeCCcccccc---ccCCCeeEEEE
Confidence 99999999 8999999999998654333 689999999 7889999999999999 99999999999
Q ss_pred cceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcccc
Q 009669 245 EHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQV 324 (529)
Q Consensus 245 d~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i 324 (529)
|||+||.+++|+. .|.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+ ||
T Consensus 228 d~v~Vp~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~-------~i 288 (396)
T 1egd_A 228 EDVKVPKENVLIG------DGAGFK------VAMGAFDKERPVVAAGAVGLAQRALDEATKYALERKTFGK-------LL 288 (396)
T ss_dssp EEEEEEGGGBSSS------TTBHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEETTE-------EG
T ss_pred CcEEECHHHcCCC------CCccHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCc-------ch
Confidence 9999999999984 555443 5566778899999999999999999999999999999999 99
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccccc
Q 009669 325 IDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGY 404 (529)
Q Consensus 325 ~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy 404 (529)
++||.+|++|++|.+.+++++.+++++++.++. +. +....++++|+++++.+.++++.|+|+|||+||
T Consensus 289 ~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~-------g~-----~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~ 356 (396)
T 1egd_A 289 VEHQAISFMLAEMAMKVELARMSYQRAAWEVDS-------GR-----RNTYYASIAKAFAGDIANQLATDAVQILGGNGF 356 (396)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TS-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----cchHHHHHHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999887652 11 123457899999999999999999999999999
Q ss_pred cCcCCHHHHhhhhcccccccccHHHHHHHHHHHHHHHH
Q 009669 405 LCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTV 442 (529)
Q Consensus 405 ~~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~ 442 (529)
+++++++++|||++...+++|++++++..+++.+++.|
T Consensus 357 ~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~~~ 394 (396)
T 1egd_A 357 NTEYPVEKLMRDAKIYQIYGGTSQIQRLIVAREHIDKY 394 (396)
T ss_dssp BTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHTT
T ss_pred cCCChHHHHHHHhhCeeecCCHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999998765
No 13
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=100.00 E-value=1.4e-55 Score=463.76 Aligned_cols=353 Identities=18% Similarity=0.215 Sum_probs=305.3
Q ss_pred CChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhhcC-------
Q 009669 27 GSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------- 94 (529)
Q Consensus 27 ~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~~------- 94 (529)
-++||.++++++++|+.++.... ....+....+..++|+.+.+.|| |+++||.+.++..
T Consensus 29 ~~~e~~~l~~~~r~~~~~~~~~~---------~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~ee 99 (403)
T 3r7k_A 29 TTPERRALSQMARSFVEREIAPK---------LAEWEHVGEIPRDLHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVTEA 99 (403)
T ss_dssp GCHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTSCCTHHHHHHHHHTCTTBTSCGGGTCCBCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCChh---------HHHHHhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHH
Confidence 35799999999999998653211 11122222344678999999997 6888887654321
Q ss_pred -----Cc-c--hhhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEec
Q 009669 95 -----EP-A--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHS 166 (529)
Q Consensus 95 -----~~-~--~~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLnt 166 (529)
.+ . ++.+|..++...|..+|+++||++|||++++|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 100 la~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln- 176 (403)
T 3r7k_A 100 ILAAGGSTGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVRE--GDTYVVN- 176 (403)
T ss_dssp HHHTTCCHHHHHHHCTHHHHSHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEC--SSEEEEE-
T ss_pred HHhcCCchHHHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEecCCCCCCChhhceEEEEEE--CCEEEEE-
Confidence 12 1 34445567788899999999999999999999999999999999999999999999998 8899999
Q ss_pred CCCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEecc
Q 009669 167 PTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEH 246 (529)
Q Consensus 167 p~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~fd~ 246 (529)
|+|+|++| +..||+++|+|+++.+ +..|+.+|+|| .+.|||++.+.|+++| ++++++++|.|||
T Consensus 177 ----G~K~~vs~-a~~Ad~~~v~a~~~~~-~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~fd~ 240 (403)
T 3r7k_A 177 ----GAKTFITS-GVRADFVTTAVRTGGP-GYGGVSLLVID-------KNSPGFEVSRRLDKMG---WRCSDTAELSFVD 240 (403)
T ss_dssp ----EEEEEEET-TTTCSEEEEEEECSSS-SGGGEEEEEEE-------TTCTTEEEEEECCBSS---CTTSCEEEEEEEE
T ss_pred ----EEEEcccC-CccCCEEEEEEEcCCC-CCCceEEEEEe-------CCCCCeEecCcccccC---CCCCCceEEEEee
Confidence 99999999 8999999999998655 55789999999 7889999999999999 9999999999999
Q ss_pred eecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcccccc
Q 009669 247 VRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVID 326 (529)
Q Consensus 247 vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~~ 326 (529)
|+||.+++|+. .|.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+ ||++
T Consensus 241 v~Vp~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~~ 301 (403)
T 3r7k_A 241 VRVPADNLVGA------ENSGFL------QIMQQFQAERLGIAVQAYATAGRALDLAKSWARERETFGR-------PLTG 301 (403)
T ss_dssp EEEEGGGEESS------TTCHHH------HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGG
T ss_pred EEECHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCCC-------chhh
Confidence 99999999984 454443 5567788899999999999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccC
Q 009669 327 YKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLC 406 (529)
Q Consensus 327 ~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~~ 406 (529)
||.+||+|++|.+.+++++.+++++++.+++ +. +....++++|+++++.+.++++.|+|+|||+||++
T Consensus 302 ~q~vq~~la~~~~~~~aar~~~~~aa~~~d~-------~~-----~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~G~~~ 369 (403)
T 3r7k_A 302 RQIIRHKLAEMARQVDVACTYTRAVMQRWLA-------GE-----DVVAEVSMAKNTAVYACDYVVNEAVQIFGGMGYMR 369 (403)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CC-----CcHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEecC
Confidence 9999999999999999999999999887752 11 12345889999999999999999999999999999
Q ss_pred cCCHHHHhhhhcccccccccHHHHHHHHHHHH
Q 009669 407 SSGLPELFAVYVPACTYEGDNIVLLLQVARFL 438 (529)
Q Consensus 407 ~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~l 438 (529)
+++++++|||++...+++|++++++..|++.+
T Consensus 370 ~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l 401 (403)
T 3r7k_A 370 ESEIERHYRDCRILGIGGGTNEIMNEVIAKRI 401 (403)
T ss_dssp TSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHH
T ss_pred CchHHHHHHHhCcceeecCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999876
No 14
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=2.2e-55 Score=462.29 Aligned_cols=365 Identities=19% Similarity=0.214 Sum_probs=308.5
Q ss_pred CCCCHHHHHHHHcCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhH
Q 009669 14 AQFDVDEMKIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASM 88 (529)
Q Consensus 14 ~~f~~~~m~~~~~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~ 88 (529)
..=++..|++ .-++||.++++++++|+.++.... ....+.......++|+.+.+.|| |+++||.
T Consensus 15 ~~~~~~~M~~--~~~~e~~~l~~~~r~~~~~~~~~~---------~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~ 83 (403)
T 3p4t_A 15 QTQGPGSMSI--WTTAEREALRKTVRAFAEREVLPH---------AHEWERAGEIPRELHRKAAELGLLGAGFPEDAGGS 83 (403)
T ss_dssp --------CT--TSSHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTSCCHHHHHHHHHTTCTTBTSCGGGTCC
T ss_pred hccCCCCCCC--CCCHHHHHHHHHHHHHHHHhCchh---------HHHHhhcCCCCHHHHHHHHHCCCCcCCCChhhCCC
Confidence 3445667765 445899999999999998753211 11122222344678999999997 6888887
Q ss_pred hhhhc------------CCcc---hhhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEE
Q 009669 89 LRSSV------------DEPA---FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTA 153 (529)
Q Consensus 89 ~~~~~------------~~~~---~~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtA 153 (529)
+.++. +.+. ++.+|..++...|..+|+++||++|||++++|+.++|+++|||++|||+.+++|+|
T Consensus 84 g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A 163 (403)
T 3p4t_A 84 GGDGADPVVICEEMHYAGSPGGVYASLFTCGIAVPHMIASGDQRLIDTYVRPTLRGEKIGALAITEPGGGSDVGHLRTRA 163 (403)
T ss_dssp BCCTHHHHHHHHHHHHTTCCHHHHHHHSTHHHHSHHHHHHTCHHHHHHTHHHHHTTSSCEEEECCBTTBSSCGGGCCCEE
T ss_pred CCCHHHHHHHHHHHHHhCCchhhhHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceEEE
Confidence 65432 2233 34456567778899999999999999999999999999999999999999999999
Q ss_pred EEeCCCCeEEEecCCCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccc
Q 009669 154 TFDPQTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGA 233 (529)
Q Consensus 154 t~d~~~~~~vLntp~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~ 233 (529)
+++ +|+|+|| |+|+|++| +..||+++|+|+++.+ +..|+.+|+|| .+.|||++.+.|+++|
T Consensus 164 ~~~--~~g~~ln-----G~K~~vs~-a~~Ad~~~v~a~~~~~-~~~g~~~flV~-------~~~pGv~v~~~~~~~G--- 224 (403)
T 3p4t_A 164 DLD--GDHYVIN-----GAKTYITS-GVRADYVVTAARTGGP-GAGGVSLIVVD-------KGTPGFEVTRKLDKMG--- 224 (403)
T ss_dssp EEE--TTEEEEE-----EEEEEEET-TTTCSEEEEEEECSSS-SGGGEEEEEEE-------TTCTTEEEEEECCBSS---
T ss_pred EEe--CCEEEEE-----EEEEEecC-CcccCEEEEEEEeCCC-CCCceEEEEEe-------CCCCCeEecCCCCccc---
Confidence 999 8999999 99999999 8999999999998654 45789999999 7889999999999999
Q ss_pred cCCCCcceEEecceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceec
Q 009669 234 YNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQF 313 (529)
Q Consensus 234 ~~~~~~~~v~fd~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qF 313 (529)
++++++++|.||||+||.+++|+. .|.++. .....+...|+.+++.++|+++++++.+++|+++|+||
T Consensus 225 ~~~~~~~~v~fddv~Vp~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~f 292 (403)
T 3p4t_A 225 WRSSDTAELSYTDVRVPVANLVGS------ENTGFA------QIAAAFVAERVGLATQAYAGAQRCLDLTVEWCRNRDTF 292 (403)
T ss_dssp CTTSCEEEEEEEEEEEEGGGEESS------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEET
T ss_pred CCCCCeeEEEEcceEecHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccC
Confidence 999999999999999999999984 454443 56677888999999999999999999999999999999
Q ss_pred CCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHH
Q 009669 314 GSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIE 393 (529)
Q Consensus 314 g~~~~~~e~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~ 393 (529)
|+ ||++||.+|++|++|.+.+++++.+++++++.++. +.. .....++++|+++++.+.++++
T Consensus 293 g~-------pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~-------~~~----~~~~~~~~aK~~a~~~a~~v~~ 354 (403)
T 3p4t_A 293 GR-------PLISRQAVQNTLAGMARRIDVARVYTRHVVERQLA-------GET----NLIAEVCFAKNTAVEAGEWVAN 354 (403)
T ss_dssp TE-------EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TCC----CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CC-------cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCC----CchhHHHHHHHHHHHHHHHHHH
Confidence 99 99999999999999999999999999999887752 111 1145688999999999999999
Q ss_pred HHHHHhccccccCcCCHHHHhhhhcccccccccHHHHHHHHHHHH
Q 009669 394 ECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFL 438 (529)
Q Consensus 394 ~~~q~~GG~Gy~~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~l 438 (529)
.|+|+|||+||+++++++++|||++...+++|++++++..+++.+
T Consensus 355 ~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l 399 (403)
T 3p4t_A 355 QAVQLFGGMGYMAESEVERQYRDMRILGIGGGTTEILTSLAAKTL 399 (403)
T ss_dssp HHHHHHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHH
T ss_pred HHHHhhChhhccCCCcHHHHHHHhhcceeccCHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999987
No 15
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=1.9e-55 Score=458.08 Aligned_cols=351 Identities=21% Similarity=0.239 Sum_probs=301.0
Q ss_pred CChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhhcC-------
Q 009669 27 GSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------- 94 (529)
Q Consensus 27 ~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~~------- 94 (529)
-++||.++++.+++|+.+.... .....+.......++|+.+.+.|| |+++||.+.++..
T Consensus 3 ~~~e~~~l~~~~r~~~~~~~~~---------~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~ee 73 (372)
T 2dvl_A 3 LTQEQRLVLDAVRRVAREVLYP---------LAPEYDRKAEYPWPQLKALAELGLLGMTTPEEWGGVGLDSVTWALALEE 73 (372)
T ss_dssp CCHHHHHHHHHHHHHHHHTHHH---------HHHHHHHTTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCch---------hHHHHHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHH
Confidence 3578999999999999864210 011111111234568999999886 6788886644321
Q ss_pred -----Ccc--hhhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEecC
Q 009669 95 -----EPA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (529)
Q Consensus 95 -----~~~--~~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLntp 167 (529)
.+. .+.+|..++...|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 74 l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln-- 149 (372)
T 2dvl_A 74 LAAADPSVAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRV--KGGFVLN-- 149 (372)
T ss_dssp HHHHCHHHHHHHHHHTSHHHHHHHHHCCHHHHHHTHHHHHTTSSCEEEECCCSSCSSCGGGCCCEEEEE--TTEEEEE--
T ss_pred HHhcCcHHHHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCChhhCeeEEEEE--CCEEEEE--
Confidence 122 23445346778899999999999999999999999999999999999999999999998 8999999
Q ss_pred CCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEecce
Q 009669 168 TLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHV 247 (529)
Q Consensus 168 ~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~fd~v 247 (529)
|+|+|++| +..||+++|+|+++. |+++|+|| .+.|||++.+.|+++| ++++++++|.||||
T Consensus 150 ---G~K~~~s~-~~~Ad~~~v~a~~~~-----g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~fd~v 210 (372)
T 2dvl_A 150 ---GVKSWITS-AGHAHLYVVMARTEK-----GISAFLVE-------KGTPGLSFGRPEEKMG---LHAAHTAEVRLEEV 210 (372)
T ss_dssp ---EEEEEEET-TTTCSEEEEEEEETT-----EEEEEEEE-------TTCTTEEECCCCCCSS---CTTSCEEEEEEEEE
T ss_pred ---eEEEeecC-CCcCCEEEEEEEeCC-----CcEEEEEe-------CCCCCeEecCcccccc---cCcCCeeEEEECcE
Confidence 99999999 899999999999742 78999999 7899999999999999 99999999999999
Q ss_pred ecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcccccch
Q 009669 248 RIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDY 327 (529)
Q Consensus 248 rVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~~~ 327 (529)
+||.+++|+. .|.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+ ||++|
T Consensus 211 ~Vp~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~~~ 271 (372)
T 2dvl_A 211 FVPEENLLGE------EGRGLA------YALAGLDSGRVGVAAQAVGIARGAFEIAKAYAEEREQFGK-------KLKEH 271 (372)
T ss_dssp EEEGGGEESS------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGS
T ss_pred EeCHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCC-------chhhh
Confidence 9999999984 455443 5567788899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccCc
Q 009669 328 KTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCS 407 (529)
Q Consensus 328 q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~~~ 407 (529)
|.+||+|++|.+.+++++.+++++++.++. +. +....++++|+++++.+.++++.|+|+|||+||+++
T Consensus 272 q~vq~~la~~~~~~~aar~~~~~aa~~~~~-------g~-----~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~ 339 (372)
T 2dvl_A 272 QAIAFKIADMHVKIAAARALVLEAARKKDR-------GE-----RFTLEASAAKLFASAAAVEVTREAVQVLGGYGYHRD 339 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----chHHHHHHHHHHHHHHHHHHHHHHHHhhcCeecCCC
Confidence 999999999999999999999999887641 11 234568899999999999999999999999999999
Q ss_pred CCHHHHhhhhcccccccccHHHHHHHHHHHHHH
Q 009669 408 SGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 440 (529)
Q Consensus 408 ~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 440 (529)
++++++|||++...+++|++++++..|++.+++
T Consensus 340 ~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 372 (372)
T 2dvl_A 340 YRVERYYRDAKVTEIYEGTSEIQRLVIARELYR 372 (372)
T ss_dssp GSHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHhhcceecCCHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999998863
No 16
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=100.00 E-value=6.2e-55 Score=456.22 Aligned_cols=355 Identities=22% Similarity=0.257 Sum_probs=304.7
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhhc-------
Q 009669 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSV------- 93 (529)
Q Consensus 26 ~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~------- 93 (529)
.-++||.++++++++|+.++.... ....+.......++|+.+.+.|| |+++||.+.++.
T Consensus 9 ~~~~~~~~l~~~~~~~~~~~~~~~---------~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 79 (385)
T 2pg0_A 9 YLREEHHMFRAAFRKFLEKEAYPH---------YNDWEKRGIIPRSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINE 79 (385)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTSCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCchh---------HHHHHhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHH
Confidence 346899999999999997653211 11122222234578999999997 678887654331
Q ss_pred -----C-CcchhhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEecC
Q 009669 94 -----D-EPAFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (529)
Q Consensus 94 -----~-~~~~~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLntp 167 (529)
+ .+.++.+|..++...|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 80 ela~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln-- 155 (385)
T 2pg0_A 80 ELEKVGSSLVGIGLHNDIVTPYIASYGTEEQKQKWLPKCVTGELITAIAMTEPGAGSDLANISTTAVKD--GDYYIVN-- 155 (385)
T ss_dssp HHHHHCGGGHHHHHHHHTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE--
T ss_pred HHHhhCCchHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCCCcCHhhCeEEEEEc--CCEEEEE--
Confidence 2 23334346667888899999999999999999999999999999999999999999999998 8899999
Q ss_pred CCCceeeccCCCCCCCcEEEEEEEEecC--CCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEec
Q 009669 168 TLTSSKWWPGGLGKVSTHAVVYARLITD--GQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFE 245 (529)
Q Consensus 168 ~~~G~K~~v~~l~~~A~~~lV~Ar~~~~--g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~fd 245 (529)
|+|+|++| +..||+++|+|+++.+ +++.|+++|+|| .+.|||++.+.|+++| +++++++.|.||
T Consensus 156 ---G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~g---~~~~~~~~v~fd 221 (385)
T 2pg0_A 156 ---GQKTFITN-GIHADLIVVACKTDPQAKPPHRGISLLVVE-------RDTPGFTRGRKLEKVG---LHAQDTAELFFQ 221 (385)
T ss_dssp ---EEEEEETT-TTTCSEEEEEEESCTTCSSGGGGEEEEEEE-------TTCTTEEECCCCCBSS---CTTSCCEEEEEE
T ss_pred ---eEEecccC-CcccCEEEEEEEeCCccCCCCCceEEEEEe-------CCCCCeEecCCccccc---cCCCceEEEEEc
Confidence 99999999 8999999999998644 345689999999 7889999999999999 999999999999
Q ss_pred ceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCccccc
Q 009669 246 HVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVI 325 (529)
Q Consensus 246 ~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~ 325 (529)
||+||.+++|+. .|.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+ ||+
T Consensus 222 ~v~Vp~~~~lg~------~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~ 282 (385)
T 2pg0_A 222 DAKVPAYNLLGE------EGKGFY------YLMEKLQQERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGK-------RVS 282 (385)
T ss_dssp EEEEEGGGEESC------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGG
T ss_pred ceEEcHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCC-------ccc
Confidence 999999999984 455443 5566778899999999999999999999999999999999 999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccc
Q 009669 326 DYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYL 405 (529)
Q Consensus 326 ~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~ 405 (529)
+||.+||+|++|.+.+++++.+++++++.+++ +. +....++++|+++++.+.++++.|+|+|||+||+
T Consensus 283 ~~q~v~~~la~~~~~~~aar~~~~~aa~~~d~-------g~-----~~~~~~~~aK~~a~e~a~~~~~~a~q~~Gg~g~~ 350 (385)
T 2pg0_A 283 EFQTVQFRLAEMATEIALGRTFVDRVIEEHMA-------GK-----QIVTEVSMAKWWITEMAKRVAAEAMQLHGGYGYM 350 (385)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGB
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----CchHHHHHHHHHHHHHHHHHHHHHHHHhCccccC
Confidence 99999999999999999999999999887652 11 2356688999999999999999999999999999
Q ss_pred CcCCHHHHhhhhcccccccccHHHHHHHHHHHH
Q 009669 406 CSSGLPELFAVYVPACTYEGDNIVLLLQVARFL 438 (529)
Q Consensus 406 ~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~l 438 (529)
++++++++|||++...+++|++++++..+++.+
T Consensus 351 ~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~l 383 (385)
T 2pg0_A 351 EEYEIARRYRDIPVSAIYAGTNEMMKTIIARQL 383 (385)
T ss_dssp TTSHHHHHHHHGGGGGTTTSCHHHHHHHHHHHT
T ss_pred CCCcHHHHHhhhcCceeecCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999864
No 17
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=5.1e-55 Score=461.33 Aligned_cols=366 Identities=18% Similarity=0.221 Sum_probs=305.2
Q ss_pred HHHHHHcCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHH------------------HHHHHHHHHHHHcCC
Q 009669 20 EMKIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTL------------------RKAAYAWKRIIELRL 81 (529)
Q Consensus 20 ~m~~~~~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~------------------~~~~~~~~~l~~~g~ 81 (529)
.|++ .-++||.++++++++|+.++... .....+... ....++|+.+.+.||
T Consensus 4 ~M~~--~~~~~~~~l~~~~r~~~~~~~~p---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~G~ 72 (415)
T 4hr3_A 4 SMDF--APSARAAELIAAVREFIDAEVMP---------VERAVLAHHDELLGARAGTTAELWHVPPELDSLKAKARAAGL 72 (415)
T ss_dssp ---C--CCCHHHHHHHHHHHHHHHHTHHH---------HHHHHHHHHHHHHHTTCSCSGGGGSCCTHHHHHHHHHHHTTC
T ss_pred CCCC--CCCHHHHHHHHHHHHHHHHhCCc---------cHHHHhhhccccccccccccccccCcchhHHHHHHHHHhCCC
Confidence 3554 45689999999999999876210 011111111 134678999999997
Q ss_pred -----CHHHHhHhhhhcC---------C----cchhhhhh--hchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCC
Q 009669 82 -----SEEEASMLRSSVD---------E----PAFTDLHW--GMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELG 141 (529)
Q Consensus 82 -----~~~~gg~~~~~~~---------~----~~~~~~~~--~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~ 141 (529)
|+++||.+.++.. . +.++..+. ..+...|..+|+++||++|||++++|++++|+++|||+
T Consensus 73 ~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~ 152 (415)
T 4hr3_A 73 WNLFLPDPELGGGLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPLLEGDIRSAFCMTEPD 152 (415)
T ss_dssp SSTTCCCTTTSCCCCHHHHHHHHHHHTTCSSHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHTTSCEEEEECCCTT
T ss_pred cCcCCCHHHCCCCCCHHHHHHHHHHHhcccchHHHHHHhccccchHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCC
Confidence 6788887654321 1 11121111 12336789999999999999999999999999999999
Q ss_pred -CCCCCCCCceEEEEeCCCCeEEEecCCCCceeeccCCCCCC--CcEEEEEEEEecCC-CCcceEEEEEEeccCCCCCCC
Q 009669 142 -HGSNVQGLETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKV--STHAVVYARLITDG-QDHGVNGFIVQLRSLEDHSPL 217 (529)
Q Consensus 142 -~Gsd~~~~~TtAt~d~~~~~~vLntp~~~G~K~~v~~l~~~--A~~~lV~Ar~~~~g-~~~g~~~flV~~rd~~~~~~~ 217 (529)
+|||+..++|+|+++ +|+|+|| |+|+||+| +.+ ||+++|+|+++.++ +..|+.+|+|| .+.
T Consensus 153 ~~gsd~~~~~t~A~~~--g~g~~ln-----G~K~~is~-a~~~~Ad~~~v~a~~~~~~~~~~g~~~flV~-------~~~ 217 (415)
T 4hr3_A 153 VASSDATNMAATAVVE--GDEVVIN-----GRKWWSTG-VGHPDCKVIIFMGLTDPNAHRYARHSMVLVP-------MDT 217 (415)
T ss_dssp SCTTSGGGCCCEEEEE--TTEEEEE-----EEEEEEET-TTSTTEEEEEEEEECCTTSCTTSSEEEEEEE-------TTS
T ss_pred CCCCchhhCeeEEEEE--CCEEEEe-----eEEeeECC-CCCCCCCEEEEEEEeCCCCCCCCceEEEEEE-------cCC
Confidence 999999999999998 8999999 99999999 866 99999999987543 34689999999 788
Q ss_pred CCeEEcccCCcccccccCCCC--cceEEecceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHH
Q 009669 218 PGITIGDIGMKFGNGAYNTMD--NGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCA 295 (529)
Q Consensus 218 pGv~i~~~~~k~G~~~~~~~~--~~~v~fd~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~ 295 (529)
|||++.+.|+++| +++++ +++|.||||+||.+++|+. .|.++. .....+..+|+.+++.++|+
T Consensus 218 pGv~v~~~~~~~g---~r~~~~~~~~v~fddv~Vp~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~~G~ 282 (415)
T 4hr3_A 218 PGITVERMLPTMG---FYDEPGGHGVVSFDNVRLPADAFIAG------PGKGFE------IAQGRLGPGRVHHAMRLIGL 282 (415)
T ss_dssp TTEEEEEECCBTT---BCCTTTCEEEEEEEEEEEEGGGBSSC------TTCHHH------HHHHHCSHHHHHHHHHHHHH
T ss_pred CceEecCCCCccc---cCCCCCCeeEEEEccEEECHHHcCCC------CCchHH------HHHHHHhHHHHHHHHHHHHH
Confidence 9999999999999 99887 9999999999999999984 555443 45566778999999999999
Q ss_pred HHHHHHHHHHHhhcceecCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHH
Q 009669 296 LSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHA 375 (529)
Q Consensus 296 ~~~al~~av~Ya~~R~qFg~~~~~~e~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (529)
++++++.+++|+++|+|||+ ||++||.+|++|++|.+.+++++.+++++++.+++. . ..+...
T Consensus 283 a~~al~~a~~~a~~R~~fg~-------~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~-------~---~~~~~~ 345 (415)
T 4hr3_A 283 AEVALEHACRRGLDRTAFGK-------PLVNLGGNRERIADARIAINQTRLLVLHAAWLLDTV-------G---IMGALS 345 (415)
T ss_dssp HHHHHHHHHHHHHHCEETTE-------EGGGSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------C---GGGCHH
T ss_pred HHHHHHHHHHHHhcCccCCC-------cHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------c---CCchHH
Confidence 99999999999999999999 999999999999999999999999999998877631 0 123456
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHhccccccCcCCHHHHhhhhcccccccccHHHHHHHHHHHHHHHHH
Q 009669 376 CTAGLKSLTTTATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVS 443 (529)
Q Consensus 376 ~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~~ 443 (529)
.++++|+++++.+.++++.|+|+|||+||+++++++++|||++...+++|++++++..+++.+|+.|+
T Consensus 346 ~~~~aK~~a~e~a~~v~~~a~qi~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l~~~~ 413 (415)
T 4hr3_A 346 AVSEIKVAAPNMAQQVIDMAIQIHGGGGLSNDFPLAAAWVNARALRLADGPDEVHRGVVARIELAKYA 413 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTGGGGGSSSSSHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccccCCCchHHHHHHHhhhheeecCcHHHHHHHHHHHHHHHhh
Confidence 68899999999999999999999999999999999999999999999999999999999999998764
No 18
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.3e-54 Score=454.90 Aligned_cols=356 Identities=21% Similarity=0.236 Sum_probs=304.3
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhhcC------
Q 009669 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------ 94 (529)
Q Consensus 26 ~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~~------ 94 (529)
.-++||.++++++++|+.++... .....+.......++|+.+.+.|| |+++||.+.+...
T Consensus 18 ~~~~e~~~~~~~~r~~~~~~~~~---------~~~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~e 88 (393)
T 1rx0_A 18 GLNEEQKEFQKVAFDFAAREMAP---------NMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFE 88 (393)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTHH---------HHHHHHHHTCCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCCc---------cHHHHhhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHH
Confidence 34689999999999999865310 111122222234568999999997 5888886644321
Q ss_pred ------Ccc--hhhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEec
Q 009669 95 ------EPA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHS 166 (529)
Q Consensus 95 ------~~~--~~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLnt 166 (529)
.+. .+..| .++...|..+|+++||++|||++++|+.++|+++|||++|||+.++.|+|+++ +|+|+||
T Consensus 89 ela~~~~~~~~~~~~~-~~~~~~l~~~g~~~qk~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~ln- 164 (393)
T 1rx0_A 89 ALATGCTSTTAYISIH-NMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQ--GDHYILN- 164 (393)
T ss_dssp HHHTTCHHHHHHHHHH-HHHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEE-
T ss_pred HHHHhCcchhHHHHHh-HHHHHHHHHHCCHHHHHHHHHHHhCCCceEEEEecCCCCCcCcccceeEEEEc--CCEEEEE-
Confidence 121 22334 36677889999999999999999999999999999999999999999999998 8899999
Q ss_pred CCCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEecc
Q 009669 167 PTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEH 246 (529)
Q Consensus 167 p~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~fd~ 246 (529)
|+|+|++| +..||+++|+|++.. +++.|+++|+|| .+.|||++.+.++++| +++.+++.|.|||
T Consensus 165 ----G~K~~is~-a~~Ad~~~v~a~~~~-~~~~g~~~flV~-------~~~pGv~v~~~~~~~g---~~~~~~~~v~fd~ 228 (393)
T 1rx0_A 165 ----GSKAFISG-AGESDIYVVMCRTGG-PGPKGISCIVVE-------KGTPGLSFGKKEKKVG---WNSQPTRAVIFED 228 (393)
T ss_dssp ----EEEEEEET-TTTCSEEEEEEESSS-SSGGGEEEEEEE-------TTCTTEEECCCCCBSS---CTTSCEEEEEEEE
T ss_pred ----eEEEeecC-CccCCEEEEEEEcCC-CCCCceEEEEEe-------CCCCCeEecCcccccc---cCCCCceEEEEcC
Confidence 99999999 899999999999753 345689999999 7889999999999999 9999999999999
Q ss_pred eecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcccccc
Q 009669 247 VRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVID 326 (529)
Q Consensus 247 vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~~ 326 (529)
|+||.+++|+. .|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++
T Consensus 229 v~Vp~~~~lg~------~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~-------~i~~ 289 (393)
T 1rx0_A 229 CAVPVANRIGS------EGQGFL------IAVRGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFGE-------PLAS 289 (393)
T ss_dssp EEEEGGGEESS------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGG
T ss_pred eEeCHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCC-------chhh
Confidence 99999999984 455443 4556677899999999999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccC
Q 009669 327 YKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLC 406 (529)
Q Consensus 327 ~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~~ 406 (529)
||.+||+|++|.+.+++++.+++++++.++. +. ++....++++|+++++.+.++++.|+|+|||+||++
T Consensus 290 ~q~vq~~la~~~~~~~aar~~~~~aa~~~d~-------~~----~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~ 358 (393)
T 1rx0_A 290 NQYLQFTLADMATRLVAARLMVRNAAVALQE-------ER----KDAVALCSMAKLFATDECFAICNQALQMHGGYGYLK 358 (393)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC----TTHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC----cchhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecC
Confidence 9999999999999999999999999887652 11 234567899999999999999999999999999999
Q ss_pred cCCHHHHhhhhcccccccccHHHHHHHHHHHHHH
Q 009669 407 SSGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 440 (529)
Q Consensus 407 ~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 440 (529)
+++++++|||++...+++|++++++..+++.+++
T Consensus 359 ~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 392 (393)
T 1rx0_A 359 DYAVQQYVRDSRVHQILEGSNEVMRILISRSLLQ 392 (393)
T ss_dssp TSTHHHHHHHHHHTTTSSSCHHHHHHHHHHHHHH
T ss_pred CChHHHHHHhccCceecCChHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999875
No 19
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=3.5e-55 Score=458.38 Aligned_cols=354 Identities=21% Similarity=0.220 Sum_probs=295.6
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhhcC------
Q 009669 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------ 94 (529)
Q Consensus 26 ~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~~------ 94 (529)
.-++||.++++++++|+.++.... ....+....+..++|+.+.+.|| |+++||.+.++..
T Consensus 15 ~~~~~~~~l~~~~r~~~~~~~~~~---------~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~e 85 (387)
T 3nf4_A 15 LPSQEAAELIELTREIADKVLDPI---------VDRHEKDETYPEGVFEQLGAAGLLSLPQPEEWGGGGQPYEVYLQVLE 85 (387)
T ss_dssp CSSHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTCCCTTHHHHHHTTTTTSTTSCGGGTCCCCCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhCCcc---------HHHHhhhCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHH
Confidence 345899999999999998653211 11122222344568999999997 6888886644321
Q ss_pred ------Ccch--hhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEec
Q 009669 95 ------EPAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHS 166 (529)
Q Consensus 95 ------~~~~--~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLnt 166 (529)
.+.+ +..|. ++...|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 86 el~~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~ln- 161 (387)
T 3nf4_A 86 EIAARWASVAVAVSVHS-LSSHPLLVFGTEEQKKRWLPGMLSGEQIGAYSLSEPQAGSDAAALRCAATPT--DGGYVIN- 161 (387)
T ss_dssp HHHTTCHHHHHHHHHHH-HHTHHHHHHSCHHHHHHHHHHHTTSSCCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE-
T ss_pred HHHHhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEEcCCCCCCChhhCEEEEEEe--CCEEEEE-
Confidence 1222 23343 6677899999999999999999999999999999999999999999999998 8999999
Q ss_pred CCCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEecc
Q 009669 167 PTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEH 246 (529)
Q Consensus 167 p~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~fd~ 246 (529)
|+|+|++| +..||+++|+|++. ++..|+++|+|| .+.|||++.+.++++| ++++++++|.|||
T Consensus 162 ----G~K~~~s~-~~~Ad~~~v~a~~~--~~~~g~~~flV~-------~~~pGv~~~~~~~~~G---~~~~~~~~v~fd~ 224 (387)
T 3nf4_A 162 ----GSKSWITH-GGKADFYTLFARTG--EGSRGVSCFLVP-------ADQPGLSFGKPEEKMG---LHAVPTTSAFYDN 224 (387)
T ss_dssp ----EEEEEEET-TTTCSEEEEEEECC----CCCEEEEEEE-------TTCTTEEECCCCCBSS---CCSSCEEEEEEEE
T ss_pred ----eEEecccC-CcccCEEEEEEEeC--CCCCceEEEEEE-------CCCCCeEecCcccccc---cCCCCeeEEEEee
Confidence 99999999 89999999999986 344689999999 7889999999999999 9999999999999
Q ss_pred eecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcccccc
Q 009669 247 VRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVID 326 (529)
Q Consensus 247 vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~~ 326 (529)
|+||.+++|+. .|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++
T Consensus 225 v~Vp~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~-------~i~~ 285 (387)
T 3nf4_A 225 ARIDADRRIGE------EGQGLQ------IAFSALDSGRLGIAAVATGLAQAALDEAVAYANERTAFGR-------KIID 285 (387)
T ss_dssp EEEEGGGEESS------TTCHHH------HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------CTTT
T ss_pred EEecHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCC-------chhh
Confidence 99999999984 555443 5566778899999999999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccC
Q 009669 327 YKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLC 406 (529)
Q Consensus 327 ~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~~ 406 (529)
||.+||+|++|.+.+++++.+++++++.+++ +. +....++++|+++++.+.++++.|+|+|||+||++
T Consensus 286 ~q~v~~~la~~~~~~~aar~~~~~aa~~~~~-------~~-----~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~G~~~ 353 (387)
T 3nf4_A 286 HQGLGFLLADMAAAVATARATYLDAARRRDQ-------GR-----PYSQQASIAKLTATDAAMKVTTDAVQVFGGVGYTR 353 (387)
T ss_dssp C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CC-----CchHHHHHHHHHHHHHHHHHHHHHHHhhCcHhhcC
Confidence 9999999999999999999999999877652 11 23455789999999999999999999999999999
Q ss_pred cCCHHHHhhhhcccccccccHHHHHHHHHHHHHH
Q 009669 407 SSGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 440 (529)
Q Consensus 407 ~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 440 (529)
+++++++|||++...+++|++++++..|++.+++
T Consensus 354 ~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l~~ 387 (387)
T 3nf4_A 354 DYRVERYMREAKIMQIFEGTNQIQRLVIARGLTR 387 (387)
T ss_dssp TSSHHHHHHHHHHHTTSSSCHHHHHHHHHHTTC-
T ss_pred CCcHHHHHhHhhcCeeecChHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999998764
No 20
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=100.00 E-value=1.9e-55 Score=461.86 Aligned_cols=359 Identities=21% Similarity=0.207 Sum_probs=300.4
Q ss_pred HHHHHHcCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhhcC
Q 009669 20 EMKIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD 94 (529)
Q Consensus 20 ~m~~~~~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~~ 94 (529)
.|++ .-++||.++++++++|+.++... .....+....+..++|+.+.+.|| |+++||.+.++..
T Consensus 14 ~m~~--~~~~e~~~l~~~~r~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~ 82 (396)
T 3ii9_A 14 LLDQ--QLADDERMVRDAAHAYAQGKLAP---------RVTEAFRHETTDAAIFREMGEIGLLGPTIPEQYGGPGLDYVS 82 (396)
T ss_dssp CGGG--GSCHHHHHHHHHHHHHCCCCCHH---------HHHHHHHHTCCCTHHHHHHHHTTCSSTTSCGGGTSCCCCHHH
T ss_pred ccCC--CCCHHHHHHHHHHHHHHHHhCCh---------hHHHHHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHH
Confidence 3554 44689999999999998664310 111122222334578999999997 6888887654321
Q ss_pred ------------Ccc--hhhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCC
Q 009669 95 ------------EPA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTD 160 (529)
Q Consensus 95 ------------~~~--~~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~ 160 (529)
.+. .+.+|..++...|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|
T Consensus 83 ~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~ 160 (396)
T 3ii9_A 83 YGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKV--PG 160 (396)
T ss_dssp HHHHHHHHHTTCHHHHHHHHCCCCCCCHHHHHHSCHHHHHHHHHHHHHTSSCEEEECCCCC------CCCCEEEEE--TT
T ss_pred HHHHHHHHHHhChhHHHHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCChhhCeeEEEEe--CC
Confidence 122 23445556677899999999999999999999999999999999999999999999998 89
Q ss_pred eEEEecCCCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcc
Q 009669 161 EFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNG 240 (529)
Q Consensus 161 ~~vLntp~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~ 240 (529)
+|+|| |+|.|++| +..||+++|+|+++.+ +..|+++|+|| .+.|||++.+.|+++| +++++++
T Consensus 161 g~~ln-----G~K~~vs~-a~~Ad~~~v~a~~~~~-g~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~ 223 (396)
T 3ii9_A 161 GYSLS-----GSKMWITN-SPIADVFVVWAKLDED-GRDEIRGFILE-------KGCKGLSAPAIHGKVG---LRASITG 223 (396)
T ss_dssp EEEEE-----EEEEEEET-GGGCSEEEEEEEEEET-TEEEEEEEEEE-------TTCTTEECCBCCCCSS---CTTSCEE
T ss_pred EEEEE-----EEEEeECC-CccCCEEEEEEEecCC-CCCceEEEEEe-------cCCCCeEecccccccc---CCcCCee
Confidence 99999 99999999 8999999999998733 34679999999 7889999999999999 9999999
Q ss_pred eEEecceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCC
Q 009669 241 VLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGP 320 (529)
Q Consensus 241 ~v~fd~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~ 320 (529)
+|.||||+||.+++|+. +.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+
T Consensus 224 ~v~fddv~Vp~~~~l~~-------~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~----- 285 (396)
T 3ii9_A 224 EIVLDEAFVPEENILPH-------VKGLR------GPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGR----- 285 (396)
T ss_dssp EEEEEEEEEEGGGBCTT-------CCSTH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-----
T ss_pred EEEEccEEECHHHccCC-------ChHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCC-----
Confidence 99999999999999973 33333 5567788899999999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Q 009669 321 ETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCG 400 (529)
Q Consensus 321 e~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~G 400 (529)
||++||.+||+|++|.+.+++++.+++++++.+++ +. +....++++|.++++.+.++++.|+|+||
T Consensus 286 --~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~-------~~-----~~~~~~~~aK~~a~~~a~~~~~~a~q~~G 351 (396)
T 3ii9_A 286 --PLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDE-------GT-----AAVEITSIMKRNSCGKALDIARLARDMLG 351 (396)
T ss_dssp --EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred --chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----CchHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999887763 11 23455789999999999999999999999
Q ss_pred cccccCcCCHHHHhhhhcccccccccHHHHHHHHHHHHHH
Q 009669 401 GHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 440 (529)
Q Consensus 401 G~Gy~~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 440 (529)
|+||+++++++++|||++...+++|++++++..+++.+++
T Consensus 352 g~g~~~~~~~~r~~Rda~~~~i~~Gt~~~~~~~ia~~llg 391 (396)
T 3ii9_A 352 GNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAQTG 391 (396)
T ss_dssp SCSCSGGGHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHS
T ss_pred cccccCCCcHHHHHhhhcCceeecCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999974
No 21
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.1e-54 Score=454.86 Aligned_cols=355 Identities=22% Similarity=0.234 Sum_probs=304.3
Q ss_pred HHHHHHcCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHH-HHHHHHHHHcCCC----HHHHhHhhhhcC
Q 009669 20 EMKIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKA-AYAWKRIIELRLS----EEEASMLRSSVD 94 (529)
Q Consensus 20 ~m~~~~~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~~~~~l~~~g~~----~~~gg~~~~~~~ 94 (529)
.|++ .-++||.++++++++|+.++.... ....+...... .++|+.+.+.||. +++||.+.++..
T Consensus 25 ~m~~--~l~~e~~~l~~~~r~~~~~~~~~~---------~~~~~~~~~~p~~~~~~~l~~~Gl~~l~~~e~GG~g~~~~~ 93 (403)
T 3sf6_A 25 GINA--VLSAEEREIRDTVRSVVQRRIKPH---------IASWYEDGELPARELAVELGELGLLGMHLKGYGCAGMSAVA 93 (403)
T ss_dssp TCGG--GSCHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTCCCHHHHHHHHHHTTCSSTTSCSTTCCCCCHHH
T ss_pred ccCC--CCCHHHHHHHHHHHHHHHHhcChh---------HHHHHhcCCCCHHHHHHHHHHCCCCcccchhhCCCCCCHHH
Confidence 4544 446899999999999998743211 11122222233 6789999999874 566776544321
Q ss_pred ------------Ccc--hhhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCC
Q 009669 95 ------------EPA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTD 160 (529)
Q Consensus 95 ------------~~~--~~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~ 160 (529)
.+. .+.+|..++...|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|
T Consensus 94 ~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~ 171 (403)
T 3sf6_A 94 YGLACLELEAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDMASGHRIGCFGLTEPDHGSDPAGMRTRATRS--GD 171 (403)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEE--TT
T ss_pred HHHHHHHHHHhcccHHHHHHHhhhhHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEEccCCCCCCchhcEEEEEEE--CC
Confidence 122 23456667788899999999999999999999999999999999999999999999998 88
Q ss_pred eEEEecCCCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcc
Q 009669 161 EFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNG 240 (529)
Q Consensus 161 ~~vLntp~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~ 240 (529)
+|+|| |+|+|++| +..||+++|+|+++ .|+++|+|| .+.|||++.+.|+++| +++++++
T Consensus 172 g~~ln-----G~K~~is~-a~~Ad~~~v~ar~~-----~g~~~flV~-------~~~pGv~v~~~~~~~G---~r~~~~~ 230 (403)
T 3sf6_A 172 DWILT-----GTKMWITN-GSVADVAVVWARTD-----EGIRGFVVP-------TDTPGFTANTIKSKMS---LRASVTS 230 (403)
T ss_dssp EEEEE-----EEEEEEET-GGGCSEEEEEEEET-----TEEEEEEEE-------TTSTTEEEEECCSCSS---CTTSCEE
T ss_pred EEEEE-----EEEEeecC-CcccCEEEEEEEeC-----CceEEEEEE-------CCCCCeEecCCCCccC---CCCCcee
Confidence 99999 99999999 89999999999974 479999999 7889999999999999 9999999
Q ss_pred eEEecceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCC
Q 009669 241 VLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGP 320 (529)
Q Consensus 241 ~v~fd~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~ 320 (529)
+|.||||+||.+++|+. +.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+
T Consensus 231 ~v~fd~v~Vp~~~~lg~-------~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~----- 292 (403)
T 3sf6_A 231 ELVLDGVRLPDSARLPG-------ATSLG------APLRCLNEARFGIVFGALGAARDCLETALAYACSREQFDR----- 292 (403)
T ss_dssp EEEEEEEEEEGGGBCTT-------CCSTH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-----
T ss_pred EEEEccEEEcHHHccCC-------ChhHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCC-----
Confidence 99999999999999983 33333 5567788899999999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Q 009669 321 ETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCG 400 (529)
Q Consensus 321 e~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~G 400 (529)
||++||.+||+|++|.+.+++++.+++++++.++. +. +....++++|+++++.+.++++.|+|+||
T Consensus 293 --pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~-------~~-----~~~~~~~~aK~~a~~~a~~v~~~a~q~~G 358 (403)
T 3sf6_A 293 --PIGGFQLTQQKLADMTLEYGKGFLLALHLGRQKDA-------GE-----LAPEQVSLGKLNNVREAIEIARTARTVLG 358 (403)
T ss_dssp --EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred --cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----CchHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999887763 11 12455789999999999999999999999
Q ss_pred cccccCcCCHHHHhhhhcccccccccHHHHHHHHHHHHHH
Q 009669 401 GHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 440 (529)
Q Consensus 401 G~Gy~~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 440 (529)
|+||+++++++++|||++...+++|++++++..+++.+++
T Consensus 359 g~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~llg 398 (403)
T 3sf6_A 359 ASGITGEYPVMRHANNLESVLTYEGTSEMHTLIIGQALTG 398 (403)
T ss_dssp GGGGSTTSSHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHS
T ss_pred CeEccccCcHHHHHhhcccceeecCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999974
No 22
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-53 Score=452.60 Aligned_cols=378 Identities=17% Similarity=0.208 Sum_probs=301.6
Q ss_pred CCCHHHHHHHHcCChhhHHHHHHHHHHHhcCC-CCCCCcccCCCHH----H-HHHHHHHHHHHHHHHHHHcCCC----HH
Q 009669 15 QFDVDEMKIVWAGSRHAFQVSDRIARLVASDP-AFRKDNRAMLSRK----E-LFKNTLRKAAYAWKRIIELRLS----EE 84 (529)
Q Consensus 15 ~f~~~~m~~~~~~~~e~~~lr~~~~~~l~~~~-~~~~~~~~~~~r~----~-~~~~~~~~~~~~~~~l~~~g~~----~~ 84 (529)
.|+...|++ .-++||.++++++++|++++. +..... ...++. + .+. .......+|+.+.+.||. ++
T Consensus 13 ~~~~~~m~~--~~~~e~~~l~~~~r~f~~~~~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~Gl~~l~~P~ 88 (428)
T 2wbi_A 13 QIDTTGQLF--VQTRKGQEVLIKVKHFMKQHILPAEKEV-TEFYVQNENSVDKWG-KPLVIDKLKEMAKVEGLWNLFLPA 88 (428)
T ss_dssp -----------CCCHHHHHHHHHHHHHHHHTHHHHHHHH-HC----------CCS-CCHHHHHHHHHHHHTTCCSTTCHH
T ss_pred cCCCccCCC--CCCHHHHHHHHHHHHHHHhhCCchhcch-hHHhhhccccccccC-CcccHHHHHHHHHHCCCCeecCCC
Confidence 366777876 446899999999999998763 111000 000000 0 000 002346789999999984 33
Q ss_pred HHhHhhhhc---------CC----cchhhhhh--hchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCC-CCCCCCC
Q 009669 85 EASMLRSSV---------DE----PAFTDLHW--GMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELG-HGSNVQG 148 (529)
Q Consensus 85 ~gg~~~~~~---------~~----~~~~~~~~--~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~-~Gsd~~~ 148 (529)
|.+.+.. .. +.++.++. .++...|..+|+++||++|||++++|++++|+++|||+ +|||+.+
T Consensus 89 --G~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~l~~G~~~~~~a~tEp~~aGsd~~~ 166 (428)
T 2wbi_A 89 --VSGLSHVDYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPLLQGNITSCFCMTEPDVASSDATN 166 (428)
T ss_dssp --HHCCCHHHHHHHHHHHTTSTTHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHHTSSEEEEECCCTTSCTTSGGG
T ss_pred --CCCCCHHHHHHHHHHHHhhcchhhhHhhhccchhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEEecCCcCCCCccc
Confidence 3332221 11 11222221 24566788899999999999999999999999999999 9999999
Q ss_pred CceEEEEeCCCCeEEEecCCCCceeeccCCCCCC--CcEEEEEEEEecCC--CCcceEEEEEEeccCCCCCCCCCeEEcc
Q 009669 149 LETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKV--STHAVVYARLITDG--QDHGVNGFIVQLRSLEDHSPLPGITIGD 224 (529)
Q Consensus 149 ~~TtAt~d~~~~~~vLntp~~~G~K~~v~~l~~~--A~~~lV~Ar~~~~g--~~~g~~~flV~~rd~~~~~~~pGv~i~~ 224 (529)
++|+|+++ +|+|+|| |+|+||+| +.. ||+++|+|+++.++ +..|+++|+|| .+.|||++.+
T Consensus 167 ~~t~A~~~--~~g~~ln-----G~K~~is~-a~~~~Ad~~~v~art~~~~~~~~~g~~~flV~-------~~~pGv~v~~ 231 (428)
T 2wbi_A 167 IECSIQRD--EDSYVIN-----GKKWWSSG-AGNPKCKIAIVLGRTQNTSLSRHKQHSMILVP-------MNTPGVKIIR 231 (428)
T ss_dssp CCCEEEEE--TTEEEEE-----EEEEEEET-TTSTTEEEEEEEEECCCTTSCGGGCEEEEEEE-------TTSTTEEEEE
T ss_pred ceEEEEEe--CCEEEEE-----eEEeccCC-CCCCcCCEEEEEEEeCCccCCCCCceEEEEEE-------CCCCcEEecC
Confidence 99999998 8899999 99999999 877 99999999986542 34689999999 7889999999
Q ss_pred cCCcccccccCCCC---cceEEecceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 009669 225 IGMKFGNGAYNTMD---NGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVC 301 (529)
Q Consensus 225 ~~~k~G~~~~~~~~---~~~v~fd~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~ 301 (529)
.|+++| +++++ +++|.||||+||.+++|+. .|.++. .....+..+|+.+++.++|+++++++
T Consensus 232 ~~~~~G---~~~~~~~~~~~v~fddv~VP~~~~lg~------~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~ 296 (428)
T 2wbi_A 232 PLSVFG---YTDNFHGGHFEIHFNQVRVPATNLILG------EGRGFE------ISQGRLGPGRIHHCMRTVGLAERALQ 296 (428)
T ss_dssp ECCBTT---BCCGGGCCEEEEEEEEEEEEGGGBCSC------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccc---cCCCCCCCeEEEEeCceEECHHHhcCC------ccchHH------HHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 999999 99885 8999999999999999984 455443 45566788999999999999999999
Q ss_pred HHHHHhhcceecCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHH
Q 009669 302 IATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLK 381 (529)
Q Consensus 302 ~av~Ya~~R~qFg~~~~~~e~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK 381 (529)
.+++|+++|+|||+ ||++||.+||+|++|.+.+++++.+++++++.+++.- ..+....++++|
T Consensus 297 ~a~~ya~~R~~fG~-------~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~g----------~~~~~~~~~~aK 359 (428)
T 2wbi_A 297 IMCERATQRIAFKK-------KLYAHEVVAHWIAESRIAIEKIRLLTLKAAHSMDTLG----------SAGAKKEIAMIK 359 (428)
T ss_dssp HHHHHHHHCEETTE-------EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHTHHHHHHHH
T ss_pred HHHHHHhhCcccCC-------ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC----------CcchHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999998876420 023456689999
Q ss_pred HHHHHHHHHHHHHHHHHhccccccCcCCHHHHhhhhcccccccccHHHHHHHHHHHHHHHHHHh
Q 009669 382 SLTTTATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVSQL 445 (529)
Q Consensus 382 ~~~~~~a~~~~~~~~q~~GG~Gy~~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~~~~ 445 (529)
+++++.+.++++.|+|+|||+||+++++++++|||++...+++|++++++.++++.+|+.+++.
T Consensus 360 ~~a~e~a~~v~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~~~~~ 423 (428)
T 2wbi_A 360 VAAPRAVSKIVDWAIQVCGGAGVSQDYPLANMYAITRVLRLADGPDEVHLSAIATMELRDQAKR 423 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGGGSTTSSHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCCCcHHHHHHHHhhcEecCChHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999999999999999999999999987653
No 23
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=100.00 E-value=1.4e-54 Score=460.23 Aligned_cols=353 Identities=21% Similarity=0.274 Sum_probs=299.4
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCCC----HHHHhHhhhhc--------
Q 009669 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRLS----EEEASMLRSSV-------- 93 (529)
Q Consensus 26 ~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~~----~~~gg~~~~~~-------- 93 (529)
.-++||.++++++++|++++.... ....+....+..++|+.+.++||. +++||.+.+..
T Consensus 54 ~l~~e~~~l~~~~r~f~~~~~~p~---------~~~~~~~~~~p~~~~~~l~e~Gl~~l~~pe~GG~G~~~~~~~~v~ee 124 (436)
T 2ix5_A 54 LLTPEEQAIRKKVRECMEKEVAPI---------MTEYWEKAEFPFHITPKLGAMGVAGGSIKGYGCPGLSITANAIATAE 124 (436)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTHHH---------HHHHHHHTCCCGGGHHHHHTTTCTTTTCCSTTCCCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhhCChh---------hHHHHhcCCCCHHHHHHHHHcCCCcCcCCCCCCCCCCHHHHHHHHHH
Confidence 446899999999999997643100 011111112334689999999972 26777654332
Q ss_pred ----CCcch--hhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEecC
Q 009669 94 ----DEPAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (529)
Q Consensus 94 ----~~~~~--~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLntp 167 (529)
+.+.+ +.+|..++...|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 125 la~~~~~~~~~~~~~~~~~~~~l~~~gt~~qk~~~l~~l~~G~~~~a~a~tEp~~GSd~~~~~t~A~~~--gdg~vLn-- 200 (436)
T 2ix5_A 125 IARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKV--EGGWKIN-- 200 (436)
T ss_dssp HHHHCHHHHHHHHHHHTTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE--
T ss_pred HHhhCccHHHHHHhHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCcccceEEEEEe--CCEEEEe--
Confidence 11222 3456667788899999999999999999999999999999999999999999999998 8899999
Q ss_pred CCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEecce
Q 009669 168 TLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHV 247 (529)
Q Consensus 168 ~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~fd~v 247 (529)
|+|+||+| +..||+++|+|++..+ .++++|+|| .+.|||++.+.|+++| ++++++++|.||||
T Consensus 201 ---G~K~~is~-a~~Ad~~lv~Ar~~~~---~~~~~flV~-------~~~pGv~v~~~~~~~G---~r~~~~~~v~fddv 263 (436)
T 2ix5_A 201 ---GQKRWIGN-STFADLLIIFARNTTT---NQINGFIVK-------KDAPGLKATKIPNKIG---LRMVQNGDILLQNV 263 (436)
T ss_dssp ---EEEEEEET-TTTCSEEEEEEEETTT---SSEEEEEEE-------TTCTTEEEEECCCBSS---STTSCEEEEEEEEE
T ss_pred ---eeccCCCC-CcccCEEEEEEEECCC---CcEEEEEEE-------CCCCCeEeeccccccC---CCcCCceeEEeccE
Confidence 99999999 8999999999997532 368999999 7899999999999999 99999999999999
Q ss_pred ecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcccccch
Q 009669 248 RIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDY 327 (529)
Q Consensus 248 rVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~~~ 327 (529)
+||.+++|+. .+| +. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++|
T Consensus 264 ~VP~~~~lg~-----~~g--~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~qfG~-------pi~~~ 323 (436)
T 2ix5_A 264 FVPDEDRLPG-----VNS--FQ------DTSKVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGA-------PLAAF 323 (436)
T ss_dssp EEEGGGBCTT-----CSS--HH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGS
T ss_pred EECHHHcCCc-----ccc--HH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc-------chhhc
Confidence 9999999984 122 22 4556778899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccCc
Q 009669 328 KTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCS 407 (529)
Q Consensus 328 q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~~~ 407 (529)
|.+||+|++|.+.+++++.+++++++.+++ +. .....++++|+++++.+.++++.|+|+|||+||+++
T Consensus 324 q~vq~~la~~~~~~~aar~l~~~aa~~~d~-------g~-----~~~~~as~aK~~a~e~a~~v~~~a~q~~Gg~G~~~e 391 (436)
T 2ix5_A 324 QLNQQKLVQMLGNVQAMFLMGWRLCKLYET-------GQ-----MTPGQASLGKAWISSKARETASLGRELLGGNGILAD 391 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CC-----CchHHHHHHHHHHHHHHHHHHHHHHHHhCccccccC
Confidence 999999999999999999999999887752 11 123457889999999999999999999999999999
Q ss_pred CCHHHHhhhhcccccccccHHHHHHHHHHHHHH
Q 009669 408 SGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 440 (529)
Q Consensus 408 ~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 440 (529)
++++++|||++...+++|++++++..+++.+++
T Consensus 392 ~~l~r~~Rda~~~~i~~Gt~ei~~~~iar~llg 424 (436)
T 2ix5_A 392 FLVAKAFCDLEPIYTYEGTYDINTLVTGREVTG 424 (436)
T ss_dssp GSHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHS
T ss_pred ChHHHHHHHhhcceeecCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999874
No 24
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=100.00 E-value=6.9e-55 Score=457.96 Aligned_cols=364 Identities=20% Similarity=0.256 Sum_probs=306.7
Q ss_pred cCCCCHHHH-HHHHcCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCCC----HHHHh
Q 009669 13 KAQFDVDEM-KIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRLS----EEEAS 87 (529)
Q Consensus 13 ~~~f~~~~m-~~~~~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~~----~~~gg 87 (529)
+..++...| ..-+.-++||.++++++++|+.++... .....+....+..++|+.+.+.||. +++||
T Consensus 11 ~~~~~~~~~~~m~~~l~~e~~~l~~~~r~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~~e~GG 81 (399)
T 3swo_A 11 KSTYAPLELFDTDRLLDQDERDIAATVRQFVDTRLKP---------NVEGWFESATLPSELAKEFGNLGVLGMHLQGYGC 81 (399)
T ss_dssp CCCCCHHHHHTGGGGSCHHHHHHHHHHHHHHHHHTHH---------HHHHHHHHTCCCTTHHHHHHHHTCTTTTSCSTTC
T ss_pred CccccccccccCCCCCCHHHHHHHHHHHHHHHHhCCh---------hHHHHHhhCCCCHHHHHHHHHCCCCcCChhhhCC
Confidence 344554333 222345689999999999999874310 1111122222335689999988874 56677
Q ss_pred HhhhhcC------------Ccc--hhhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEE
Q 009669 88 MLRSSVD------------EPA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTA 153 (529)
Q Consensus 88 ~~~~~~~------------~~~--~~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtA 153 (529)
.+.++.. .+. .+.+|..++...|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|
T Consensus 82 ~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A 161 (399)
T 3swo_A 82 AGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRA 161 (399)
T ss_dssp CCCCHHHHHHHHHHHHHHCHHHHHHHHHHTTTHHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEE
T ss_pred CCCCHHHHHHHHHHHHHhCccHHHHHHHHhhhhhhHHHhcCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCCccceEEE
Confidence 6544321 122 23456567788999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCeEEEecCCCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccc
Q 009669 154 TFDPQTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGA 233 (529)
Q Consensus 154 t~d~~~~~~vLntp~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~ 233 (529)
+++ +|+|+|| |+|+|++| +..||+++|+|+++ .|+.+|+|| .+.|||++.+.|+++|
T Consensus 162 ~~~--~~g~~ln-----G~K~~vs~-a~~Ad~~~v~a~~~-----~g~~~flV~-------~~~pGv~v~~~~~~~G--- 218 (399)
T 3swo_A 162 RRD--GSDWILN-----GTKMWITN-GNLADVATVWAQTD-----DGIRGFLVP-------TDTPGFTANEIHRKLS--- 218 (399)
T ss_dssp EEE--TTEEEEE-----EEEEEEET-TTTCSEEEEEEBCT-----TSCEEEEEE-------TTSTTEEEEECCCBSS---
T ss_pred EEe--CCEEEEE-----EEEEeECC-CCccCEEEEEEEeC-----CceEEEEEe-------CCCCCeEeecCcCccc---
Confidence 998 8899999 99999999 89999999999974 468999999 7889999999999999
Q ss_pred cCCCCcceEEecceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceec
Q 009669 234 YNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQF 313 (529)
Q Consensus 234 ~~~~~~~~v~fd~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qF 313 (529)
++++++++|.||||+||.+++|+. +.++. .....+...|+.+++.++|+++++++.+++|+++|+||
T Consensus 219 ~r~~~~~~v~fd~v~Vp~~~~lg~-------~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~f 285 (399)
T 3swo_A 219 LRASVTSELVLDNVRLPASAQLPL-------AEGLS------APLSCLNEARFGIVFGALGAARDSLETTIAYTQSREVF 285 (399)
T ss_dssp CCSSCEEEEEEEEEEECGGGBCTT-------CCSTH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEET
T ss_pred CCCCceeEEEEccEEEcHHHcCCC-------ChhHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeC
Confidence 999999999999999999999983 33333 55677888999999999999999999999999999999
Q ss_pred CCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHH
Q 009669 314 GSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIE 393 (529)
Q Consensus 314 g~~~~~~e~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~ 393 (529)
|+ ||++||.+||+|++|.+.+++++.+++++++.++. + .+....++++|+++++.+.++++
T Consensus 286 G~-------~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~-------~-----~~~~~~~~~aK~~a~~~a~~v~~ 346 (399)
T 3swo_A 286 DK-------PLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDA-------E-----GVRPEQISLGKLNNVREAIAIAR 346 (399)
T ss_dssp TE-------EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------T-----CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred Cc-------chhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------C-----CCchHHHHHHHHHHHHHHHHHHH
Confidence 99 99999999999999999999999999999887752 1 12345678999999999999999
Q ss_pred HHHHHhccccccCcCCHHHHhhhhcccccccccHHHHHHHHHHHHHH
Q 009669 394 ECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 440 (529)
Q Consensus 394 ~~~q~~GG~Gy~~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 440 (529)
.|+|+|||+||+++++++++|||++...+++|++++++..+++.+++
T Consensus 347 ~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~llg 393 (399)
T 3swo_A 347 ECRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALTG 393 (399)
T ss_dssp HHHHHHGGGGGBSSSTHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHS
T ss_pred HHHHhhCcccccCCCcHHHHHHHhhcceeecCHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999975
No 25
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=100.00 E-value=3.8e-54 Score=450.27 Aligned_cols=352 Identities=21% Similarity=0.243 Sum_probs=296.0
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhhcC------
Q 009669 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------ 94 (529)
Q Consensus 26 ~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~~------ 94 (529)
.-++||.++++++++|+.++... .....+........+|+.+.+.|| |+++||.+.++..
T Consensus 10 ~~~~~~~~l~~~~r~~~~~~~~~---------~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 80 (385)
T 2eba_A 10 LLTPEEKEVQKAARRFLEKEALP---------HIRDWWEEGVFPTHLIPRFAELGFLGPTLPPEYGGAGVSSAAYGLICY 80 (385)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTHH---------HHHHHHHTTCCCGGGHHHHHHHTCSSTTSCGGGTCCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCCc---------cHHHHHHhCCCCHHHHHHHHHCCCcCCCCchhhCCCCCCHHHHHHHHH
Confidence 34578999999999999754210 011111111123467999999887 6888886644321
Q ss_pred ------Ccc--hhhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCC-CCCceEEEEeCCCCeEEEe
Q 009669 95 ------EPA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNV-QGLETTATFDPQTDEFVIH 165 (529)
Q Consensus 95 ------~~~--~~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~-~~~~TtAt~d~~~~~~vLn 165 (529)
.+. .+.+|..++...|..+|+++||++|||++.+|++++|+++|||++|||+ .+++|+|+++ +|+|+||
T Consensus 81 ela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~~t~A~~~--~~g~~ln 158 (385)
T 2eba_A 81 ELERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLARGEMVGCFGLTEPDGGSDPYGNMKTRARRE--GDTWVLN 158 (385)
T ss_dssp HHHHHCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCCTTCTTSTTTTCCCEEEC----CEEEEE
T ss_pred HHHHhCchHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCcCCCccccCeeEEEEe--CCEEEEE
Confidence 122 2345556777889999999999999999999999999999999999999 9999999988 8899999
Q ss_pred cCCCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEec
Q 009669 166 SPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFE 245 (529)
Q Consensus 166 tp~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~fd 245 (529)
|+|+|++| +..||+++|+|+++ ++ . +++|+|| .+.|||++.+.|+++| ++++++++|.||
T Consensus 159 -----G~K~~~s~-~~~Ad~~~v~a~~~-~g--~-~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~f~ 218 (385)
T 2eba_A 159 -----GTKMWITN-GNLAHLAVIWAKDE-GG--E-VLGFLVP-------TDTPGFQAREVKRKMS---LRASVTSELVLE 218 (385)
T ss_dssp -----EEEEEEET-TTTCSEEEEEEECC-------EEEEEEE-------TTSTTEEEEECCSBSS---SCSSCEEEEEEE
T ss_pred -----eeeeccCC-CcccCEEEEEEEeC-CC--c-EEEEEEe-------CCCCCeEecccccccc---cccCceeEEEEc
Confidence 99999999 89999999999975 22 2 8899999 7889999999999999 999999999999
Q ss_pred ceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCccccc
Q 009669 246 HVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVI 325 (529)
Q Consensus 246 ~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~ 325 (529)
||+||.+++| . .|.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+ ||+
T Consensus 219 ~v~Vp~~~~l-~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~ 278 (385)
T 2eba_A 219 EVRVPESLRL-P------KALGLK------APLSCLTQARFGIAWGAMGALEAVYEEAVAFAKSRSTFGE-------PLA 278 (385)
T ss_dssp EEEEEGGGBC-T------TCCSTH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSS-------BGG
T ss_pred cEEEcHHHcc-C------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCe-------eHH
Confidence 9999999999 3 344333 4556677899999999999999999999999999999999 999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccc
Q 009669 326 DYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYL 405 (529)
Q Consensus 326 ~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~ 405 (529)
+||.+||+|++|.+.+++++.+++++++.+++ +. +....++++|.++++.+.++++.|+|+|||+||+
T Consensus 279 ~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~-------g~-----~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~ 346 (385)
T 2eba_A 279 KKQLVQAKLAEMLAWHTEGLLLAWRLARLKDE-------GK-----LTPAQVSLAKRQNVWKALQAARMARDILGGSGIT 346 (385)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGB
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----CchHHHHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 99999999999999999999999999887652 11 1245578999999999999999999999999999
Q ss_pred CcCCHHHHhhhhcccccccccHHHHHHHHHHHHHH
Q 009669 406 CSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 440 (529)
Q Consensus 406 ~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 440 (529)
++++++++|||++...+++|++++++..+++.+++
T Consensus 347 ~~~~l~r~~Rda~~~~~~~G~~~~~~~~ia~~llg 381 (385)
T 2eba_A 347 LEYHAIRHMLNLETVYTYEGTHDVHTLVLGREITG 381 (385)
T ss_dssp TTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHS
T ss_pred CcChHHHHHHhccCceeeCChHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999874
No 26
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=1.5e-53 Score=447.49 Aligned_cols=354 Identities=18% Similarity=0.239 Sum_probs=303.8
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHH-HHHHHHHHHcCC-----CHHHHhHhh--hhcC---
Q 009669 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKA-AYAWKRIIELRL-----SEEEASMLR--SSVD--- 94 (529)
Q Consensus 26 ~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~~~~~l~~~g~-----~~~~gg~~~--~~~~--- 94 (529)
.-++||.++++++++|+.++.... ....+....+. .++|+.+.+.|| |+++||.+. +...
T Consensus 4 ~~~~~~~~l~~~~r~~~~~~~~~~---------~~~~d~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~~~ 74 (397)
T 3mpi_A 4 NLSKELQMLQKEVRNFVNKKIVPF---------ADQWDNENHFPYEEAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMI 74 (397)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTCCCTTTTHHHHHHTTTTCTTSCGGGTSCCCTTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCChh---------HHHHHhcCCCCHHHHHHHHHHCCCCccCCChhhCCCCCCCCHHHHHH
Confidence 346899999999999998653211 11222222233 578999999997 688888776 4322
Q ss_pred ---------Ccch--hhhhhhchHH-HHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeE
Q 009669 95 ---------EPAF--TDLHWGMFVP-AIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEF 162 (529)
Q Consensus 95 ---------~~~~--~~~~~~l~~~-~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~ 162 (529)
.+.+ +.+| .++.. .|..+|+++||++|||++.+|++++|+++|||++|||+.++.|+|+++ +|+|
T Consensus 75 v~eela~~~~~~~~~~~~~-~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~ 151 (397)
T 3mpi_A 75 VTEEIARGSSALRVQLNME-VLGCAYTILTYGSEALKKKYVPKLSSAEFLGGFGITEPDAGSDVMAMSSTAEDK--GDHW 151 (397)
T ss_dssp HHHHHHHHCHHHHHHHHHH-TTTTHHHHHHHSCHHHHHHHHHHHHTTSSCCCEECCBTTBSSCGGGCCCEEEEC--SSEE
T ss_pred HHHHHHhhCchHHHHHHHH-HHhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeEEEEEe--CCEE
Confidence 1222 3344 45566 899999999999999999999999999999999999999999999998 8899
Q ss_pred EEecCCCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEE-EeccCCCCCCCCCeEEcccCCcccccccCCCCcce
Q 009669 163 VIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIV-QLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGV 241 (529)
Q Consensus 163 vLntp~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV-~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~ 241 (529)
+|| |+|+|++| +..||+++|+|++..+++..|+.+|+| | .+.|||++ +.|+++| ++++++++
T Consensus 152 ~ln-----G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~g~~~flV~~-------~~~~Gv~v-~~~~~~G---~~~~~~~~ 214 (397)
T 3mpi_A 152 LLN-----GSKTWISN-AAQADVLIYYAYTDKAAGSRGLSAFVIEP-------RNFPGIKT-SNLEKLG---SHASPTGE 214 (397)
T ss_dssp EEE-----EEEEEEET-TTTCSSEEEEEESCGGGGGGSEEEEEECT-------TTSTTEEE-EECCCSS---CTTSCEEE
T ss_pred EEE-----EEEEeeCC-CcccCEEEEEEEcCCCCCCCceEEEEEEc-------CCCCCeEe-ccCcccc---CcCCceeE
Confidence 999 99999999 899999999999876545578999999 8 78899999 8999999 99999999
Q ss_pred EEecceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCc
Q 009669 242 LRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPE 321 (529)
Q Consensus 242 v~fd~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e 321 (529)
|.||||+||.+++|+. .|.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+
T Consensus 215 v~fddv~Vp~~~~lg~------~~~g~~------~~~~~~~~~r~~~aa~~lG~a~~al~~a~~~a~~R~~fg~------ 276 (397)
T 3mpi_A 215 LFLDNVKVPKENILGK------PGDGAR------IVFGSLNHTRLSAAAGGVGLAQACLDAAIKYCNERRQFGK------ 276 (397)
T ss_dssp EEEEEEEEEGGGEESS------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE------
T ss_pred EEEeeEEECHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCC------
Confidence 9999999999999984 555443 5667788899999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhcc
Q 009669 322 TQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGG 401 (529)
Q Consensus 322 ~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG 401 (529)
||++||.+|++|++|.+.+++++.+++++++.+++ +. .+....++++|+++++.+.++++.|+|+|||
T Consensus 277 -~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~-------~~----~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg 344 (397)
T 3mpi_A 277 -PIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDE-------GR----LNNGLDVAMAKYAAGEAVSKCANYAMRILGA 344 (397)
T ss_dssp -EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC----TEEHHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred -chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC----CccHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999887652 11 2345568899999999999999999999999
Q ss_pred ccccCcCCHHHHhhhhcccccccccHHHHHHHHH-HHH
Q 009669 402 HGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVA-RFL 438 (529)
Q Consensus 402 ~Gy~~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia-~~l 438 (529)
+||+++++++++|||++...+++|++++++..|+ +.+
T Consensus 345 ~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l 382 (397)
T 3mpi_A 345 YGYSTEYPVARFYRDAPTYYMVEGSANICKMIIALDQL 382 (397)
T ss_dssp GGGSTTSHHHHHHHHTTHHHHSSSCHHHHHHHHHHHHH
T ss_pred eeecCCCCHHHHHhhccceeeecCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999 766
No 27
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=100.00 E-value=7e-53 Score=463.04 Aligned_cols=353 Identities=19% Similarity=0.242 Sum_probs=299.5
Q ss_pred HHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhhcC------------C
Q 009669 33 QVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------------E 95 (529)
Q Consensus 33 ~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~~------------~ 95 (529)
++++.+++|+.+.... ..++.......++|+.+.+.|| |+++||.+.+... .
T Consensus 56 ~l~~~~~~~~~~~~~~-----------~~~d~~~~~p~~~~~~l~e~Gl~~l~~P~e~GG~gl~~~~~~~v~e~l~~~~~ 124 (607)
T 2uxw_A 56 ELVEPVSRFFEEVNDP-----------AKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDL 124 (607)
T ss_dssp HHHHHHHHHHHHTCCH-----------HHHHHHTSCCHHHHHHHHHTTTTCTTSCGGGTSCCCCHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHhhcCH-----------HHhccccCCCHHHHHHHHHcCCcCCCCChhhCCCCCCHHHHHHHHHHHHHccc
Confidence 4889999999875310 1111112233578999999997 5888887644321 1
Q ss_pred c--chhhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEecCCCCcee
Q 009669 96 P--AFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPTLTSSK 173 (529)
Q Consensus 96 ~--~~~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLntp~~~G~K 173 (529)
+ ..+..|..+...+|..+|+++||++|||++++|+.++|+++|||++|||+.++.|+|+++++|++|+|| |+|
T Consensus 125 s~a~~~~~~~~~g~~~l~~~Gt~eqk~~~Lp~l~~G~~~~~~alTEp~aGSD~~~~~t~A~~~~dG~~y~Ln-----G~K 199 (607)
T 2uxw_A 125 GVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLN-----GSK 199 (607)
T ss_dssp HHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEECTTSSEEEEE-----EEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceeEEEEeCCCCEEEEE-----eEE
Confidence 1 123345445567888999999999999999999999999999999999999999999998667799999 999
Q ss_pred eccCCCCCCCcEEEEEEEEecCC-----CCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEeccee
Q 009669 174 WWPGGLGKVSTHAVVYARLITDG-----QDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHVR 248 (529)
Q Consensus 174 ~~v~~l~~~A~~~lV~Ar~~~~g-----~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~fd~vr 248 (529)
+||++ +..||+++|+|++...+ +..|+++|+|| .+.|||++++.++|+| +++++++.|.|+||+
T Consensus 200 ~~is~-~~~Ad~~lV~Ar~~~~~~~~g~~~~gis~flVp-------~~~~Gv~v~~~~~~~G---~rg~~t~~v~fddv~ 268 (607)
T 2uxw_A 200 LWISN-GGLADIFTVFAKTPVTDPATGAVKEKITAFVVE-------RGFGGITHGPPEKKMG---IKASNTAEVFFDGVR 268 (607)
T ss_dssp EEEET-TTTCSEEEEEEEEEEECTTTCCEEEEEEEEEEE-------GGGSSEEECCCCCCSS---CTTSCEEEEEEEEEE
T ss_pred EeecC-CcccCEEEEEEEecCCCcccCCCCCceEEEEEe-------CCCCCeEEecCccccC---CCCCCeeEEEeccEE
Confidence 99999 89999999999986421 14689999999 7789999999999999 999999999999999
Q ss_pred cCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcccccchH
Q 009669 249 IPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYK 328 (529)
Q Consensus 249 VP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~~~q 328 (529)
||.+++||. .|.++. .+...+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++||
T Consensus 269 VP~~~llG~------~g~G~~------~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~qfG~-------pi~~~~ 329 (607)
T 2uxw_A 269 VPSENVLGE------VGSGFK------VAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFGE-------KIHNFG 329 (607)
T ss_dssp EEGGGEESS------TTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGSH
T ss_pred ecHHHhcCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC-------chhhcH
Confidence 999999984 566554 5677788899999999999999999999999999999998 999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccCcC
Q 009669 329 TQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSS 408 (529)
Q Consensus 329 ~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~~~~ 408 (529)
.+|++|++|.+.+++++++++.+++.++. +. ++....++++|+++++.+.+++++|+|+|||+||++++
T Consensus 330 ~vq~~La~~~~~~eaaral~~~aa~~~d~-------~~----~~~~~~~~~aK~~~se~a~~v~~~a~qv~GG~G~~~e~ 398 (607)
T 2uxw_A 330 LIQEKLARMVMLQYVTESMAYMVSANMDQ-------GA----TDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEP 398 (607)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC----SCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CC----ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCcc
Confidence 99999999999999999999998876652 11 23456789999999999999999999999999999999
Q ss_pred CHHHHhhhhcccccccccHHHHHHHHHHHHHHHH
Q 009669 409 GLPELFAVYVPACTYEGDNIVLLLQVARFLMKTV 442 (529)
Q Consensus 409 ~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~ 442 (529)
+++++|||++...+++|+|++++..++...+...
T Consensus 399 ~l~r~~Rda~~~~i~eGt~~i~~~~ia~~glq~~ 432 (607)
T 2uxw_A 399 GVERVLRDLRIFRIFEGTNDILRLFVALQGCMDK 432 (607)
T ss_dssp SHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccceeeCChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999977665433
No 28
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=100.00 E-value=4e-53 Score=443.52 Aligned_cols=354 Identities=20% Similarity=0.238 Sum_probs=297.5
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCCC----HHHHhHhhhhcC-------
Q 009669 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRLS----EEEASMLRSSVD------- 94 (529)
Q Consensus 26 ~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~~----~~~gg~~~~~~~------- 94 (529)
.-++||.++++++++|+.++... .....+.......++|+.+.+.||. +++||.+.++..
T Consensus 13 ~~~~e~~~l~~~~r~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~~~~GG~g~~~~~~~~~~ee 83 (392)
T 1siq_A 13 QLTTDEILIRDTFRTYCQERLMP---------RILLANRNEVFHREIISEMGELGVLGPTIKGYGCAGVSSVAYGLLARE 83 (392)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTHH---------HHHHHHHHTCCCTHHHHHHHHTTCSSTTCEETTEECCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcCc---------chHHHHhhCCCCHHHHHHHHhCCCCcccHHhhCCCCCCHHHHHHHHHH
Confidence 34589999999999999764210 0011111112335689999999974 556765543321
Q ss_pred -----Ccc--hhhhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEecC
Q 009669 95 -----EPA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (529)
Q Consensus 95 -----~~~--~~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLntp 167 (529)
.+. .+.+|..++...|..+|+++||++|||++.+|++++|+++|||++|||+.+++|+|++++++|+|+||
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~~~g~~ln-- 161 (392)
T 1siq_A 84 LERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLN-- 161 (392)
T ss_dssp HHTTCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEE--
T ss_pred HHHhCcHHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEECCCCCCcCccccEEEEEEeCCCCEEEEE--
Confidence 121 22345556677888999999999999999999999999999999999999999999998667899999
Q ss_pred CCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEecce
Q 009669 168 TLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHV 247 (529)
Q Consensus 168 ~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~fd~v 247 (529)
|+|+|++| +..||+++|+|+++. .++++|+|| .+.|||++.++|+++| ++++++++|.||||
T Consensus 162 ---G~K~~vs~-~~~Ad~~~v~a~~~~----g~~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~fd~v 223 (392)
T 1siq_A 162 ---GTKTWITN-SPMADLFVVWARCED----GCIRGFLLE-------KGMRGLSAPRIQGKFS---LRASATGMIIMDGV 223 (392)
T ss_dssp ---EEEEEEET-GGGCSEEEEEEEETT----SCEEEEEEE-------TTCTTEECCBCCCCSS---STTSCEEEEEEEEE
T ss_pred ---EEEEeecC-CcccCEEEEEEEECC----CCEEEEEEe-------CCCCCeEecccccccc---ccCCceEEEEEccE
Confidence 99999999 899999999999842 248899999 7889999999999999 99999999999999
Q ss_pred ecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcccccch
Q 009669 248 RIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDY 327 (529)
Q Consensus 248 rVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~~~ 327 (529)
+||.+++|+. ..| +. .....+...|+.+++.++|+++++++.+++|+++|+|||+ ||++|
T Consensus 224 ~Vp~~~~lg~-----~~g--~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~-------~i~~~ 283 (392)
T 1siq_A 224 EVPEENVLPG-----ASS--LG------GPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGV-------PLARN 283 (392)
T ss_dssp EEEGGGBCTT-----CCS--SH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGS
T ss_pred EECHHHcCCc-----ccC--HH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCc-------chhhh
Confidence 9999999974 122 22 3456677899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccCc
Q 009669 328 KTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCS 407 (529)
Q Consensus 328 q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~~~ 407 (529)
|.+||+|++|.+.+++++.+++++++.+++ +. .....++++|.++++.+.++++.|+|+|||+||+++
T Consensus 284 q~vq~~la~~~~~~~~ar~~~~~aa~~~d~-------~~-----~~~~~~~~aK~~~~~~a~~v~~~a~q~~Gg~g~~~~ 351 (392)
T 1siq_A 284 QLIQKKLADMLTEITLGLHACLQLGRLKDQ-------DK-----AAPEMVSLLKRNNCGKALDIARQARDMLGGNGISDE 351 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----cchHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC
Confidence 999999999999999999999999877652 11 123457899999999999999999999999999999
Q ss_pred CCHHHHhhhhcccccccccHHHHHHHHHHHHHH
Q 009669 408 SGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 440 (529)
Q Consensus 408 ~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 440 (529)
++++++|||++...+++|++++++..+++.+++
T Consensus 352 ~~l~r~~Rd~~~~~~~~G~~~~~~~~i~~~llg 384 (392)
T 1siq_A 352 YHVIRHAMNLEAVNTYEGTHDIHALILGRAITG 384 (392)
T ss_dssp GSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHS
T ss_pred CcHHHHHhhCcCCeeecCcHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999874
No 29
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=3.1e-53 Score=440.42 Aligned_cols=318 Identities=16% Similarity=0.183 Sum_probs=274.7
Q ss_pred HHHHHHHHHHcCC-----CHHHHhHhhhhcC------------Ccchh--hhhhhchHHHHhcCCCHHHHHhHhHHhhcc
Q 009669 69 AAYAWKRIIELRL-----SEEEASMLRSSVD------------EPAFT--DLHWGMFVPAIKGQGTDEQHQKWLPLAYKM 129 (529)
Q Consensus 69 ~~~~~~~l~~~g~-----~~~~gg~~~~~~~------------~~~~~--~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g 129 (529)
..++|+.+.+.|| |+++||.+.++.. .+.++ .+|..++...|. +|+++||++|||++.+|
T Consensus 26 ~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~-~g~~~q~~~~l~~~~~G 104 (366)
T 1r2j_A 26 PRDLLVRLGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSLRSVMTSQGMAAWTVQR-LGDAGQRATFLKELTSG 104 (366)
T ss_dssp CHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-HSCHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHhCC
Confidence 4568999999997 6788886644321 13232 344446777888 99999999999999999
Q ss_pred ceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEecCCCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEec
Q 009669 130 EIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLR 209 (529)
Q Consensus 130 ~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLntp~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~r 209 (529)
+ ++|+++|||++|||+.+++|+|+++ +|+|+|| |+|+|++| +..||+++|+|+++. + |+.+|+||
T Consensus 105 ~-~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln-----G~K~~~s~-~~~Ad~~~v~a~~~~--~--g~~~flV~-- 169 (366)
T 1r2j_A 105 K-LAAVGFSERQAGSDLSAMRTRVRLD--GDTAVVD-----GHKVWTTA-AAYADHLVVFGLQED--G--SGAVVVVP-- 169 (366)
T ss_dssp --CEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE-----EEEEEETT-TTTCSEEEEEEBCSS--S--CCEEEEEE--
T ss_pred C-eeEEEeCCCCCCCchhhCEeEEEEe--CCEEEEE-----EEEecccC-CcccCEEEEEEEeCC--C--ceEEEEEE--
Confidence 9 9999999999999999999999998 8899999 99999999 899999999999743 1 78999999
Q ss_pred cCCCCCCCCCeEEcccCCcccccccCCCCcceEEecceecCcccccccccccCCCCceeccCchhhHH-HHHHHHHHHHh
Q 009669 210 SLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLL-YGTMVYVRQTI 288 (529)
Q Consensus 210 d~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~fd~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~-~~~l~~~r~~~ 288 (529)
.+.|||++.+.|+++| ++++++++|.||||+||.+++|+. .|.++. .. ...+...|+.+
T Consensus 170 -----~~~~Gv~~~~~~~~~G---~r~~~~~~v~f~~v~Vp~~~~lg~------~~~g~~------~~~~~~l~~~r~~~ 229 (366)
T 1r2j_A 170 -----ADTPGVRVERVPKPSG---CRAAGHADLHLDQVRVPAGAVLAG------SGASLP------MLVAASLAYGRKSV 229 (366)
T ss_dssp -----TTSTTEEEEECSSCSS---STTSCCEEEEEEEEEEEGGGBCTT------TTSCTT------TTTHHHHHHHHHHH
T ss_pred -----CCCCCeEecCCcCCcc---CCCCCeeEEEEeeEEEcHHHcCCC------CCccHH------HHHHHHhhHHHHHH
Confidence 7889999999999999 999999999999999999999984 454443 34 56677899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 009669 289 VADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFS 368 (529)
Q Consensus 289 aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (529)
++.++|+++++++.+++|+++|+|||+ ||++||.+||+|++|.+.+++++.+++++++.+++. .
T Consensus 230 aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~~~q~v~~~la~~~~~~~~ar~~~~~aa~~~~~g-------~-- 293 (366)
T 1r2j_A 230 AWGCVGILRACRTAAVAHARTREQFGR-------PLGDHQLVAGHIADLWTAEQIAARVCEYASDHWDEG-------S-- 293 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEETTE-------EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHC--------------
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccCCC-------chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------C--
Confidence 999999999999999999999999999 999999999999999999999999999998766521 0
Q ss_pred ChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccCcCCHHHHhhhhcccccccccHHHHHHHHHHHHHH
Q 009669 369 TLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 440 (529)
Q Consensus 369 ~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~ 440 (529)
.+....++++|.++++.+.++++.|+|+|||+||+++++++++|||++...+++|++++++..+++.+++
T Consensus 294 --~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~G~~~~~~~~ia~~~lg 363 (366)
T 1r2j_A 294 --PEMVPATILAKHVAAERAAAGAATAAQVLASAGAREGHVVERAYRDAKLMEIIEGSSEMCRVMLAQHALA 363 (366)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGC--CCHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHTT
T ss_pred --CcchHHHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCcHHHHHHhccCceecCCHHHHHHHHHHHHHhc
Confidence 1234568899999999999999999999999999999999999999999999999999999999998864
No 30
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=100.00 E-value=8.1e-52 Score=439.84 Aligned_cols=370 Identities=15% Similarity=0.143 Sum_probs=299.6
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcc-cCCCHHHHHHHHHHHH--HHHHHHHHHcCC-----CHHHHhHhhhhcCC--
Q 009669 26 AGSRHAFQVSDRIARLVASDPAFRKDNR-AMLSRKELFKNTLRKA--AYAWKRIIELRL-----SEEEASMLRSSVDE-- 95 (529)
Q Consensus 26 ~~~~e~~~lr~~~~~~l~~~~~~~~~~~-~~~~r~~~~~~~~~~~--~~~~~~l~~~g~-----~~~~gg~~~~~~~~-- 95 (529)
.-++||.++++++|+|++++........ ...+... ..+. .++|+.+.+.|| |+++||.+.++...
T Consensus 6 ~~~~e~~~l~~~~r~f~~~~~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~ 80 (438)
T 3mkh_A 6 HLSASQKGTYQAARSLARNLLMPARQTYLQHPPNSP-----LRFQSTQPTYAAAVSAGILKGQISPAHGGTGGTLIESAI 80 (438)
T ss_dssp CCCHHHHHHHHHHHHHHHHTHHHHHHHHTTSCTTCH-----HHHHTTHHHHHHHHHTTTTGGGSCGGGTCCCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcHHHHHhhcccccc-----CcCCCcHHHHHHHHhCCCCCCCCCcccCCCCCCHHHHHH
Confidence 3468999999999999998642110000 0000111 0222 568999999997 68888876544221
Q ss_pred ----------cchhh-hhhhchHHHHhcCCCHHHHHhHhHHhhcc--ceeeeeecCCCCCCC-----CCCCCceEEEEeC
Q 009669 96 ----------PAFTD-LHWGMFVPAIKGQGTDEQHQKWLPLAYKM--EIIGCYAQTELGHGS-----NVQGLETTATFDP 157 (529)
Q Consensus 96 ----------~~~~~-~~~~l~~~~i~~~gt~eq~~~~L~~i~~g--~~~~~~a~tE~~~Gs-----d~~~~~TtAt~d~ 157 (529)
+.++. .+..++...|..+|+++ |++|||++++| +.++|+++|||++|| |+.+++|+|+++
T Consensus 81 v~eela~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~l~~~~~G~g~~~~~~a~tEp~~gs~~~~sd~~~~~t~A~~~- 158 (438)
T 3mkh_A 81 LVEECYSVEPSAALTIFATGLGLTPINLAAGPQ-HAEFLAPFLSGEGSPLASLVFSEPGGVANALEKGAPGFQTTARLE- 158 (438)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCGG-GHHHHGGGSSSCSCCCEEEECCCTTCCTTTTCTTSCCCSCEEEEE-
T ss_pred HHHHHHhhChhHHHHHHHhhHHHHHHHhhCCHH-HHHHHHHHhcCCCCceEEEEEccCCCCCCccccccccceeEEEEe-
Confidence 22211 12235566778899999 99999999996 589999999999998 589999999998
Q ss_pred CCCeEEEecCCCCceeeccCCCCC-----CCcEEEEEEEEec------CCCCcceEEEEEEeccCCCCCCCCC-eEEccc
Q 009669 158 QTDEFVIHSPTLTSSKWWPGGLGK-----VSTHAVVYARLIT------DGQDHGVNGFIVQLRSLEDHSPLPG-ITIGDI 225 (529)
Q Consensus 158 ~~~~~vLntp~~~G~K~~v~~l~~-----~A~~~lV~Ar~~~------~g~~~g~~~flV~~rd~~~~~~~pG-v~i~~~ 225 (529)
+|+|+|| |+|+||+| +. .||+++|+|++.. .++..|+++|+||..+.+ ...|| |++.+.
T Consensus 159 -g~g~~ln-----G~K~~is~-a~~~~~~~Ad~~~v~a~~~~~~~~~~~~~~~g~~~flV~~~~~~--~~~pG~v~v~~~ 229 (438)
T 3mkh_A 159 -GDEWVIN-----GEKMWATN-CAGWDFKGCDLACVVCRDATTPLEEGQDPENKVMIILVTRADLD--RNGEGSFEVLRH 229 (438)
T ss_dssp -TTEEEEE-----EEECSCTT-TTCTTSSCCSEEEEEEEECSSCCCTTCCGGGGEEEEEEEHHHHH--HHCTTSEEEEEC
T ss_pred -CCEEEEE-----eEEEEecC-CCccccccCcEEEEEEEecCcccCcccCCCCceEEEEEecCccc--cCCCCcEEecCc
Confidence 8999999 99999999 65 7999999999863 123468999999932100 01388 999999
Q ss_pred CCcccccccCCCCcceEEecceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 009669 226 GMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATR 305 (529)
Q Consensus 226 ~~k~G~~~~~~~~~~~v~fd~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~ 305 (529)
|+++| ++++++++|.||||+||.+++|+. .|.++. .....+..+|+.+++.++|+++++++.+++
T Consensus 230 ~~~~G---~r~~~~~~v~fddv~VP~~~~lg~------~~~g~~------~~~~~l~~~r~~~aa~~lG~a~~al~~a~~ 294 (438)
T 3mkh_A 230 VATPG---HTSVSGPHVRYTNVRVPTKNVLCP------AGQGAK------VAFGAFDGSAVLVGAMGVGLMRAAFDAALK 294 (438)
T ss_dssp CCCSS---CTTCCCCEEEEEEEEEEGGGEEEC------TTTHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcC---CcCCCceEEEECcEEECHHHcCCC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 999999999999999999999984 555543 566778889999999999999999999999
Q ss_pred HhhcceecC-CCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHH
Q 009669 306 YSAVRRQFG-SKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLT 384 (529)
Q Consensus 306 Ya~~R~qFg-~~~~~~e~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~ 384 (529)
|+++|+||| + ||++||.+|++|++|.+.+++++.+++++++.+++ +. .........++++|+++
T Consensus 295 ya~~R~~~g~~-------pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~-------~~-~~~~~~~~~~~~aK~~a 359 (438)
T 3mkh_A 295 FAKEDNRGGAV-------PLLERQAFADLLSGVKIQTEAARALTWKAAHAMEN-------GP-GDYDARRELALAAKVFC 359 (438)
T ss_dssp HHHHCCTTCSS-------CGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CS-SCHHHHHHHHHHHHHHH
T ss_pred HHhhcEeCCCe-------eccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-CcchhHHHHHHHHHHHH
Confidence 999999999 7 99999999999999999999999999999887763 11 11122334577899999
Q ss_pred HHHHHHHHHHHHHHhccccccCcCCHHHHhhhhcccccccccH-HHHHHHHHHHHHHH
Q 009669 385 TTATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDN-IVLLLQVARFLMKT 441 (529)
Q Consensus 385 ~~~a~~~~~~~~q~~GG~Gy~~~~~l~~~~rd~~~~~~~eG~~-~vl~~~ia~~ll~~ 441 (529)
++.+.+++++|+|+|||+||+++++++++|||++...+++|++ ++++.++++.+++.
T Consensus 360 ~e~a~~~~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~i~~Gt~~~v~~~~i~r~ll~~ 417 (438)
T 3mkh_A 360 SEAAVKACTDVINAVGISAYDLQRPFSDLLNTAVVLPIFDGGNVGIRRRHLQQLMLKP 417 (438)
T ss_dssp HHHHHHHHHHHHHHHGGGGGCTTSSHHHHHHHHTHHHHSSSCTTTTHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHhchhhccCCCcHHHHHHHhheeeeecCChHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999 99999999999976
No 31
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=100.00 E-value=1.4e-49 Score=422.67 Aligned_cols=364 Identities=15% Similarity=0.111 Sum_probs=292.6
Q ss_pred CChhhHHHHHHHHHHHhcCCCCCCCcc-cCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhhc-------
Q 009669 27 GSRHAFQVSDRIARLVASDPAFRKDNR-AMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSV------- 93 (529)
Q Consensus 27 ~~~e~~~lr~~~~~~l~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~------- 93 (529)
-++||.++++++++|++++........ ......+.++ ....+|+.+.+.|| |+++||.+.++.
T Consensus 6 ~~~e~~~l~~~~r~f~~~~~~p~~~~~d~~~~~~~~~~----~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 81 (439)
T 2c12_A 6 LSPSQLEARRHAQAFANTVLTKASAEYSTQKDQLSRFQ----ATRPFYREAVRHGLIKAQVPIPLGGTMESLVHESIILE 81 (439)
T ss_dssp CCHHHHHHHHHHHHHHHHTGGGHHHHHTTCSSHHHHHH----TTHHHHHHHHHTTTTGGGSBGGGTCCBCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCChhHHHHhhcccccCCCC----ChHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHH
Confidence 468999999999999987642110000 0000111111 11578999999997 578887654432
Q ss_pred -----CCcch--hhhhhhchHHHHhcCCCHHHHHhHhHHhh--ccceeeeeecCCCCCCC-----CCCCCceEEEEeCCC
Q 009669 94 -----DEPAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAY--KMEIIGCYAQTELGHGS-----NVQGLETTATFDPQT 159 (529)
Q Consensus 94 -----~~~~~--~~~~~~l~~~~i~~~gt~eq~~~~L~~i~--~g~~~~~~a~tE~~~Gs-----d~~~~~TtAt~d~~~ 159 (529)
+.+.+ +..| .++...|..+|+++||++|||++. +|++++|+++|||++|| |+.+++|+|+++ +
T Consensus 82 ela~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~~~G~~~~~~a~tEp~~Gs~~~~sd~~~~~t~A~~~--~ 158 (439)
T 2c12_A 82 ELFAVEPATSITIVAT-ALGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKV--G 158 (439)
T ss_dssp HHHTTCCTTHHHHHHH-HHHHHHHHHSSCHHHHHHHTGGGGSSCSCCCEEEECCCTTCSTTTTCTTSCCCSCEEEEE--T
T ss_pred HHHhhChHHHHHHHHh-HHHHHHHHHhCCHHHHHHHHHHHhhcCCCEEEEEEecCCCCCCCccccccccceeEEEEc--C
Confidence 11222 2334 355667889999999999999999 69999999999999998 588999999998 8
Q ss_pred CeEEEecCCCCceeeccCCCCC-----CCcEEEEEEEE-e----cC----CCCcceEEEEEEeccCCCCCCCC------C
Q 009669 160 DEFVIHSPTLTSSKWWPGGLGK-----VSTHAVVYARL-I----TD----GQDHGVNGFIVQLRSLEDHSPLP------G 219 (529)
Q Consensus 160 ~~~vLntp~~~G~K~~v~~l~~-----~A~~~lV~Ar~-~----~~----g~~~g~~~flV~~rd~~~~~~~p------G 219 (529)
|+|+|| |+|+||+| +. .||+++|+|++ + ++ ++..|+++|+||. +.| |
T Consensus 159 ~g~~ln-----G~K~~is~-~~~~~~~~Ad~~~v~ar~~~~~~~~~~~~~~~~~g~~~flV~~-------~~pGv~~~~G 225 (439)
T 2c12_A 159 NEWVIS-----GEKLWPSN-SGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTR-------ETIANNKKDA 225 (439)
T ss_dssp TEEEEE-----EEEECCTT-TTTTTSSCCSEEEEEEEECSCTTSCCCTTSCGGGGEEEEEECH-------HHHHTSCGGG
T ss_pred CEEEEE-----eEEEeecC-CCccccccCcEEEEEEEcCCcccCccccccCCCCceEEEEEEC-------CCCcccCCCc
Confidence 899999 99999999 65 89999999998 5 32 3346899999994 445 8
Q ss_pred eEEcccCCcccccccCCCCcceEEecceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHH
Q 009669 220 ITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRA 299 (529)
Q Consensus 220 v~i~~~~~k~G~~~~~~~~~~~v~fd~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~a 299 (529)
|++.+.++++| ++++++++|.||||+||.+++|+. .|.++.. .....+...|+.+++.++|+++++
T Consensus 226 v~v~~~~~~~G---~r~~~~~~v~fddv~VP~~~~lg~------~~~g~~~-----~~~~~l~~~r~~~aa~~~G~a~~a 291 (439)
T 2c12_A 226 YQILGEPELAG---HITTSGPHTRFTEFHVPHENLLCT------PGLKAQG-----LVETAFAMSAALVGAMAIGTARAA 291 (439)
T ss_dssp EEEEECCCBSS---CTTCCCCEEEEEEEEEEGGGBCSC------TTHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEeCCcccccc---cCCCCceEEEEccEEecHHHcCCC------CCccHHH-----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 999999999999999999999984 4443310 234567789999999999999999
Q ss_pred HHHHHHHhhc-ceecCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHH
Q 009669 300 VCIATRYSAV-RRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTA 378 (529)
Q Consensus 300 l~~av~Ya~~-R~qFg~~~~~~e~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as 378 (529)
++.+++|+++ |+|||+ ||++||.+|++|++|.+.+++++.+++++++.++. +.. ........++
T Consensus 292 l~~a~~ya~~rr~~~G~-------~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~-------~~~-~~~~~~~~~~ 356 (439)
T 2c12_A 292 FEEALVFAKSDTRGGSK-------HIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLED-------EAL-EWKVKLEMAM 356 (439)
T ss_dssp HHHHHHHHHHCCTTSSS-------CGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------TTS-CHHHHHHHHH
T ss_pred HHHHHHHHhhceeeCCe-------ehhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCc-cchhhHHHHH
Confidence 9999999996 788998 99999999999999999999999999999876641 111 1111344588
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccccccCcCCHHHHhhhhcccccccccH-HHHHHHHHHHHH
Q 009669 379 GLKSLTTTATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDN-IVLLLQVARFLM 439 (529)
Q Consensus 379 ~aK~~~~~~a~~~~~~~~q~~GG~Gy~~~~~l~~~~rd~~~~~~~eG~~-~vl~~~ia~~ll 439 (529)
++|+++++.+.++++.|+|+|||+||+++++++++|||++...+++|++ ++++.++++.+.
T Consensus 357 ~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~G~~~~~~~~~i~~~l~ 418 (439)
T 2c12_A 357 QTKIYTTDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPLFDGGNIGLRRRQMQRVMA 418 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCGGGGBTTSSHHHHHHHHTTTTTSSSCTTTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceEEcCCChHHHHHHhhhcceeecCChHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999988 799999887553
No 32
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=100.00 E-value=7.8e-49 Score=411.23 Aligned_cols=359 Identities=14% Similarity=0.066 Sum_probs=284.7
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHh-hhhcC-----
Q 009669 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASML-RSSVD----- 94 (529)
Q Consensus 26 ~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~-~~~~~----- 94 (529)
.-++||.++++.+++|+.. +.. +....+....+..++|+.+.+.|| |+++||.+ .++..
T Consensus 8 ~lt~e~~~~~~~~r~~~~~---~~~-------~a~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~ 77 (395)
T 3mxl_A 8 PLTPAGRTVVDLLAGVIPR---ISA-------EAADRDRTGTFPVEAFEQFAKLGLMGATVPAELGGLGLTRLYDVATAL 77 (395)
T ss_dssp CCSHHHHHHHHHHTTTHHH---HHH-------HHHHHHHHTCCCHHHHHHHHHHTGGGCSSCTTTTSCCCCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH---Hhh-------chHHHhhhCCCCHHHHHHHHHCCCcCcCCChhhCCCCCcCHHHHHHHH
Confidence 3468999999999999863 111 112222222344578999998887 68888877 44321
Q ss_pred -------Ccch--hhhhhhchHHHH--hcCCCHHHH---HhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCC
Q 009669 95 -------EPAF--TDLHWGMFVPAI--KGQGTDEQH---QKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTD 160 (529)
Q Consensus 95 -------~~~~--~~~~~~l~~~~i--~~~gt~eq~---~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~ 160 (529)
.+.+ +.+|..++...+ ..+|+++|| ++|||++.+|+.++|+++|||++|+ ..++|+ + +|
T Consensus 78 eel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~qk~~~~~~l~~~~~g~~~~~~a~tEp~~~~--~~~~t~---~--~~ 150 (395)
T 3mxl_A 78 MRLAEADASTALAWHVQLSRGLTLTYEWQHGTPPVRAMAERLLRAMAEGEAAVCGALKDAPGVV--TELHSD---G--AG 150 (395)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHTSCCEECCCSBCTTCC--CEEEEC---S--SS
T ss_pred HHHHhhCcHHHHHHHHHHHHHHHHHHHhhcCCHHHHhHHHHHHHHHhcCCcEEEEEecCCCCCC--CceEEe---c--CC
Confidence 1222 234443444433 356999999 9999999999999999999998763 333332 3 78
Q ss_pred eEEEecCCCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcc
Q 009669 161 EFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNG 240 (529)
Q Consensus 161 ~~vLntp~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~ 240 (529)
+|+|| |+|+|++| +..||+++|+|+++.+++..|+++|+|| .+.|||++.+.|+++| +++++++
T Consensus 151 g~~ln-----G~K~~is~-a~~Ad~~~v~a~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~r~~~~~ 214 (395)
T 3mxl_A 151 GWLLS-----GRKVLVSM-APIATHFFVHAQRRDDDGSVFLAVPVVH-------RDAPGLTVLDNWDGLG---MRASGTL 214 (395)
T ss_dssp CEEEE-----EEEEEETT-GGGCSEECCCEEEECTTSCEEEECCCEE-------TTCTTEEEECCCCBSS---CTTSCCE
T ss_pred EEEEe-----eEEEEecC-ccccCEEEEEEEeCCCCCCCceEEEEEE-------CCCCceEeCCCchhcC---CCCCCcc
Confidence 99999 99999999 8999999999999866666789999999 7889999999999999 9999999
Q ss_pred eEEecceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCC
Q 009669 241 VLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGP 320 (529)
Q Consensus 241 ~v~fd~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~ 320 (529)
+|.||||+||.+++|+.. +.|.+.. ..+..+...|+.+++.++|+++++++.+++|++ |+
T Consensus 215 ~v~f~~v~Vp~~~~lg~~----~~g~g~~------~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~-----~r----- 274 (395)
T 3mxl_A 215 EVVFDRCPVRADELLERG----PVGARRD------AVLAGQTVSSITMLGIYAGIAQAARDIAVGFCA-----GR----- 274 (395)
T ss_dssp EEEEEEEEECGGGCCEEE----ESSCCCT------THHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH-----TT-----
T ss_pred eEEEcceEcCHHHhcCCC----CCCccHH------HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CC-----
Confidence 999999999999999731 1343332 233345558999999999999999999999998 45
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC-hhhHHHHHHhHHHHHHHHHHHHHHHHHHHh
Q 009669 321 ETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFST-LPEAHACTAGLKSLTTTATADGIEECRKLC 399 (529)
Q Consensus 321 e~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~as~aK~~~~~~a~~~~~~~~q~~ 399 (529)
||++||.+|++|++|.+.+++++.+++++++.++....... .+... .......++++|.++++.+.++++.|+|+|
T Consensus 275 --~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~-~~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~a~q~~ 351 (395)
T 3mxl_A 275 --GGEPRAGARALVAGLDTRLYALRTTVGAALTNADAASVDLS-GDPDERGRRMMTPFQYAKMTVNELAPAVVDDCLSLV 351 (395)
T ss_dssp --CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-SCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc-cCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999888775332111 11110 112345678899999999999999999999
Q ss_pred ccccccCcCCHHHHhhhhcccc-cccccHHHHHHHHHHHHHH
Q 009669 400 GGHGYLCSSGLPELFAVYVPAC-TYEGDNIVLLLQVARFLMK 440 (529)
Q Consensus 400 GG~Gy~~~~~l~~~~rd~~~~~-~~eG~~~vl~~~ia~~ll~ 440 (529)
||+||+++++++++|||++... +++|++++++.++++.+|+
T Consensus 352 Gg~g~~~~~~~~r~~Rda~~~~~~~~g~~~~~~~~ia~~~Lg 393 (395)
T 3mxl_A 352 GGLAYTAGHPLSRLYRDVRAGGFMQPYSYVDAVDYLSGQALG 393 (395)
T ss_dssp CGGGGBTTSHHHHHHHHGGGGGGCSSCCHHHHHHHHHHHHSC
T ss_pred ChHhccCCCcHHHHHHHHHhccccCCCCHHHHHHHHHHHHhC
Confidence 9999999999999999999999 9999999999999999864
No 33
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=100.00 E-value=1.6e-47 Score=406.94 Aligned_cols=367 Identities=13% Similarity=0.069 Sum_probs=285.9
Q ss_pred CHHHHHHHHcCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHh-h
Q 009669 17 DVDEMKIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASML-R 90 (529)
Q Consensus 17 ~~~~m~~~~~~~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~-~ 90 (529)
++.+|++ .-++||.++++.+++|+... .. +....+.......++|+.+.+.|| |+++||.+ .
T Consensus 12 ~~~~m~~--~lt~e~~~l~~~~r~~~~~~---~~-------~a~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~gl~ 79 (439)
T 3m9v_A 12 STTGLYA--PVTPAGRVLLDRLAAHLPRI---RS-------TAAEHDRDGTFPTDTFDALRKDGLMGATVPAELGGLGVD 79 (439)
T ss_dssp CCSTTSS--CSSHHHHHHHHHHHTTHHHH---HH-------HHHHHHHHTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCC
T ss_pred CCCCCCC--CCCHHHHHHHHHHHHHHHHH---hh-------hHHHHHhcCCCCHHHHHHHHHCCCccCCCChhhCCCCCC
Confidence 5556766 44589999999999998631 11 112222222344578999999887 68888876 4
Q ss_pred hhcC------------Ccch--hhhhhhchHHHH--hcCCCHHH---HHhHhHHhhccceeeeeecCCCCCCCCCCCCce
Q 009669 91 SSVD------------EPAF--TDLHWGMFVPAI--KGQGTDEQ---HQKWLPLAYKMEIIGCYAQTELGHGSNVQGLET 151 (529)
Q Consensus 91 ~~~~------------~~~~--~~~~~~l~~~~i--~~~gt~eq---~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~T 151 (529)
+... .+.+ +.+|..++...+ ..+|+++| |++|||++.+|++++|+++|||+++ +..++|
T Consensus 80 ~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~q~~~k~~~l~~l~~g~~~~~~a~tEp~~~--~~~~~t 157 (439)
T 3m9v_A 80 RLYDVAVALLAVARADASTALALHMQLSRGLTLGYEWRHGDERARTLAERILRGMVAGDAVVCSGIKDHHTA--VTTLRP 157 (439)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTCCCEEEECEECTTC--CCEEEE
T ss_pred CHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCCCceEEEeecCCCCC--CCceee
Confidence 4321 1222 334443444433 35699999 9999999999999999999999864 444444
Q ss_pred EEEEeCCCCeEEEecCCCCceeeccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccc
Q 009669 152 TATFDPQTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGN 231 (529)
Q Consensus 152 tAt~d~~~~~~vLntp~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~ 231 (529)
+ + +|+|+|| |+|+|++| +.+||+++|+|+++.+++..|+++|+|| .+.|||++.+.|+++|
T Consensus 158 ~---~--~~g~vln-----G~K~~~s~-a~~Ad~~~v~art~~~~~~~g~~~flVp-------~~~pGv~i~~~~~~~G- 218 (439)
T 3m9v_A 158 D---G--AGGWLLS-----GRKTLVSM-APVGTHFVINARTDGTDGPPRLASPVVT-------RDTPGFTVLDNWDGLG- 218 (439)
T ss_dssp C---S--SSCEEEE-----EEEEEETT-GGGCSEEEECEEECC--CCCCEEEEEEE-------TTCTTEEECCCCCCSS-
T ss_pred c---c--CCEEEEE-----eEEEeecC-ccccCEEEEEEEecCCCCCceeEEEEEE-------CCCCCeEECCCcccCC-
Confidence 3 3 7899999 99999999 8999999999999766566789999999 7789999999999999
Q ss_pred cccCCCCcceEEecceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcce
Q 009669 232 GAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRR 311 (529)
Q Consensus 232 ~~~~~~~~~~v~fd~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~ 311 (529)
++++++++|.||||+||.+++|+.. +.|.+.. ..+..+..+|+.+++.++|+++++++++++|++
T Consensus 219 --~~~~~~~~v~fddv~VP~~~~lg~~----~~g~g~~------~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~--- 283 (439)
T 3m9v_A 219 --MRASGTVDIVFDDCPIPADHVLMRD----PVGARND------AVLAGQTVSSVSVLGVYVGVAQAAYDTAVAALE--- 283 (439)
T ss_dssp --CTTSCCEEEEEEEEEECGGGEEECC----C--CCCG------GGHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH---
T ss_pred --cCCCCceeEEEeeeEcCHHHccCCC----CCCchHH------HHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHc---
Confidence 9999999999999999999999831 1343332 222334458999999999999999999999998
Q ss_pred ecCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC-hhhHHHHHHhHHHHHHHHHHH
Q 009669 312 QFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFST-LPEAHACTAGLKSLTTTATAD 390 (529)
Q Consensus 312 qFg~~~~~~e~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~as~aK~~~~~~a~~ 390 (529)
++ ||++||.+|++|+++.+.+++++.+++++++.++....... .+... .......++++|+++++.+.+
T Consensus 284 --~r-------~i~~~~~vq~~la~~~~~~~aar~l~~~aa~~~d~~~~~~~-~~~~~~~~~~~~~~~~ak~~a~~~a~~ 353 (439)
T 3m9v_A 284 --RR-------PEPPQAAALTLVAEIDSRLYALRATAGSALTAADALSADLS-GDMDERGRQMMRHFQCAKLAVNRLAPE 353 (439)
T ss_dssp --TC-------SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCS-SCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-cccchhhhhHHHHHHHHHHHHHHHHHH
Confidence 44 89999999999999999999999999999887765322110 00000 112345677899999999999
Q ss_pred HHHHHHHHhccccccCcCCHHHHhhhhcccc-cccccHHHHHHHHHHHHHHH
Q 009669 391 GIEECRKLCGGHGYLCSSGLPELFAVYVPAC-TYEGDNIVLLLQVARFLMKT 441 (529)
Q Consensus 391 ~~~~~~q~~GG~Gy~~~~~l~~~~rd~~~~~-~~eG~~~vl~~~ia~~ll~~ 441 (529)
+++.|+|+|||+||+++++++++|||++... +++|+++++++.+++.+|+.
T Consensus 354 v~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~~~~~gt~~~~~~~i~~~~lg~ 405 (439)
T 3m9v_A 354 IVSDCLSLVGGASYTAGHPLARLLRDVQAGRFMQPYAYVDAVDFLSAQALGI 405 (439)
T ss_dssp HHHHHHHHHCGGGGSTTSHHHHHHHHTTGGGTSSSCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCHHHhcCCChHHHHHHHHHhhhhhCCCchHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999 99999999999999998754
No 34
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=100.00 E-value=4.1e-47 Score=400.75 Aligned_cols=352 Identities=11% Similarity=-0.048 Sum_probs=278.3
Q ss_pred ChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhhcC--------
Q 009669 28 SRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD-------- 94 (529)
Q Consensus 28 ~~e~~~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~~-------- 94 (529)
++||.++++.+++|+.+ +.. .....+.......++|+.+.+.|| |+++||.+.++..
T Consensus 19 ~~~~~~l~~~~r~~~~~---~~~-------~a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel 88 (414)
T 2or0_A 19 FQGMGRVLDRIEVVAEE---IRG-------QAVQSEADCRLTDAAAGLLRDSGAIRLLQPRLYGGYEVHPREFAETVMGV 88 (414)
T ss_dssp ----CHHHHHHHHTHHH---HHH-------HHHHHHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHH---HHH-------hHHHHHhcCCCCHHHHHHHHHCCCchhcCchhhCCCCCCHHHHHHHHHHH
Confidence 46888999999999864 111 011122222234568999998887 6888886644321
Q ss_pred ----Ccchh--hhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEecCC
Q 009669 95 ----EPAFT--DLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPT 168 (529)
Q Consensus 95 ----~~~~~--~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLntp~ 168 (529)
.+.++ .+| .++...|..+|+++||++|+| +|+.++|+++| | +|+|+++ +|+|+||
T Consensus 89 a~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~---~g~~~~a~a~t-p---------~t~A~~~--~~g~~ln--- 149 (414)
T 2or0_A 89 AALDGASGWVTGIV-GVHPWELAFADPQVQEEIWGE---DNDTWMASPYA-P---------MGVATPV--DGGYVLK--- 149 (414)
T ss_dssp HHHCHHHHHHHHHH-TTHHHHHTTSCHHHHHHHHSS---CTTCCEECCCS-C---------CEEEEEE--TTEEEEE---
T ss_pred HhhChHHHHHHHHH-HHHHHHHHhCCHHHHHHHHcc---CCCeEEEeccC-C---------CceeEEE--CCeEEEE---
Confidence 12232 334 467788999999999999999 79999999998 4 6899998 8899999
Q ss_pred CCceeeccCCCCCCCcEEEEEEEEecCCCCc---ceEEEEEEeccCCCCCCCCCeEEc-ccCCcccccccCCCCcceEEe
Q 009669 169 LTSSKWWPGGLGKVSTHAVVYARLITDGQDH---GVNGFIVQLRSLEDHSPLPGITIG-DIGMKFGNGAYNTMDNGVLRF 244 (529)
Q Consensus 169 ~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~---g~~~flV~~rd~~~~~~~pGv~i~-~~~~k~G~~~~~~~~~~~v~f 244 (529)
|+|+|++| +..||+++|+|++..+.+.. |+++|+|| .+ ||++. +.|+++| ++++++++|.|
T Consensus 150 --G~K~~is~-a~~Ad~~~v~a~~~~~~g~~~~~g~~~flV~-------~~--gv~v~~~~~~~~G---~r~~~~~~v~f 214 (414)
T 2or0_A 150 --GRWSFSSG-TDHCQWAFLGAMVGDGEGGIATPSSLHVILP-------RT--DYQIVEDTWDVIG---LRGTGSKDLIV 214 (414)
T ss_dssp --EEEEEETT-GGGCSEEEEEEEECC-----CCCSEEEEEEE-------GG--GCEEETTCCCBSS---CGGGCCEEEEE
T ss_pred --eeEeccCC-CchhhEEEEEEEecCCCCCcccceeEEEEEE-------hh--hcEEecCCCcccc---CcccCCCcEEE
Confidence 99999999 89999999999986432223 89999999 43 89999 9999999 99999999999
Q ss_pred cceecCcccccccccccCC--CC----ceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceec-CCCC
Q 009669 245 EHVRIPRNQMLMRVSQVTR--EG----KYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQF-GSKN 317 (529)
Q Consensus 245 d~vrVP~~~lL~~~~~v~~--~g----~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qF-g~~~ 317 (529)
|||+||.+++|+....+.. .| .+.. .....+...|+.+++.++|+++++++.+++|+++|+|| |+
T Consensus 215 d~v~VP~~~~lg~~~~~~g~~~g~~~~~g~~------~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~f~G~-- 286 (414)
T 2or0_A 215 DGAFVPGYRTLNAAKVMDGRAQKEAGRPEPL------FNMPYSCMFPLGITAAVIGITEGALACHIAVQKDRVAITGQ-- 286 (414)
T ss_dssp EEEEEEGGGEEEHHHHHHSHHHHHHTCSCSG------GGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTSC--
T ss_pred ccEEecHHHeeccccccccCCCccccCCCcc------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC--
Confidence 9999999999974110000 11 0111 22234567899999999999999999999999999999 98
Q ss_pred CCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHH
Q 009669 318 GGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRK 397 (529)
Q Consensus 318 ~~~e~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q 397 (529)
||++||.+|++|++|.+.+++++.+++++++.+++... .+.. ...+....++++|+++++.+.++++.|+|
T Consensus 287 -----~i~~~q~vq~~la~~~~~~~aar~l~~~aa~~~~~~~~---~g~~-~~~~~~~~~~~aK~~a~e~a~~v~~~a~q 357 (414)
T 2or0_A 287 -----KIKEDPYVLSAIGESAAEINASRVSLIETADRFYDKVD---AGKE-ITFEERAIGRRTQIAAAWRAVRAADEIFA 357 (414)
T ss_dssp -----BGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988764321 1221 11345667899999999999999999999
Q ss_pred HhccccccCcCCHHHHhhhhcccccccc-cHHHHHHHHHHHHHH
Q 009669 398 LCGGHGYLCSSGLPELFAVYVPACTYEG-DNIVLLLQVARFLMK 440 (529)
Q Consensus 398 ~~GG~Gy~~~~~l~~~~rd~~~~~~~eG-~~~vl~~~ia~~ll~ 440 (529)
+|||+||+++++++++|||++...+++| ++++++..+++.+++
T Consensus 358 ~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~t~~~~~~~ia~~~lg 401 (414)
T 2or0_A 358 RAGGGALHYKTPMQRFWRDAHAGLAHAVHVPGPTNHASALTQLG 401 (414)
T ss_dssp TSCGGGGBTTSSHHHHHHHHHHHHTSGGGCCHHHHHHHHHHHTT
T ss_pred hhChHhhccCCchhHHHHHHHHHHcCCcccchHHHHHHHHHHhC
Confidence 9999999999999999999999999999 999999999999874
No 35
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=100.00 E-value=6.3e-46 Score=402.05 Aligned_cols=324 Identities=18% Similarity=0.173 Sum_probs=273.4
Q ss_pred HHHHHHHHHcCCC-------HHHHhHhhhh----------cCCcchhhhhhhchHHHHhcCCCHHHHHhHhHHhhccce-
Q 009669 70 AYAWKRIIELRLS-------EEEASMLRSS----------VDEPAFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEI- 131 (529)
Q Consensus 70 ~~~~~~l~~~g~~-------~~~gg~~~~~----------~~~~~~~~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~- 131 (529)
.++++.+.+.||. +++|+..... .....|..++. .++++|..+| ++||++|||++.+|+.
T Consensus 89 ~~~~~~l~e~Gl~~l~~~~p~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~t~-~~~~~L~~~g-~eqk~~~lp~l~sge~~ 166 (541)
T 3djl_A 89 HLLMQALCTNRVHNLAWEEDARSGAFVARAARFMLHAQVEAGSLCPITMTF-AATPLLLQML-PAPFQDWTTPLLSDRYD 166 (541)
T ss_dssp HHHHHHHHHTTTTTGGGSTTCCTTHHHHHHHHHHHHHHHCSTTHHHHHHHH-HHHHHHHHHC-CGGGGGGHHHHTCSCCC
T ss_pred HHHHHHHHhCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHhhhcHHHHHH-HHHHHHHHcC-HHHHHHHHHHHhCCCcc
Confidence 3466777887762 3556543222 11234555554 4677888899 9999999999999998
Q ss_pred ------------eeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEecCCCCceeeccCCCCCCCcEEEEEEEEecCCCCc
Q 009669 132 ------------IGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDH 199 (529)
Q Consensus 132 ------------~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLntp~~~G~K~~v~~l~~~A~~~lV~Ar~~~~g~~~ 199 (529)
++|+++|||++|||+.+++|+|++++ +|+|+|| |+|+|++ +..||+++|+|+++ .
T Consensus 167 p~~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~-~g~y~Ln-----G~K~f~S--a~~Ad~~lVlArt~-----~ 233 (541)
T 3djl_A 167 SHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLE-DGSYRLV-----GHKWFFS--VPQSDAHLVLAQTA-----G 233 (541)
T ss_dssp CCSSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECT-TSCEEEE-----EEEEEEE--CTTSSEEEEEEEET-----T
T ss_pred cccccccccccceeEEEeccCCcCCCcccceeEEEEcC-CCeEEEE-----EEEEeec--ccccCEEEEEEEEC-----C
Confidence 89999999999999999999999874 4689999 9999998 58999999999984 5
Q ss_pred ceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEecceecCcccccccccccCCCCceeccCchhhHHHH
Q 009669 200 GVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYG 279 (529)
Q Consensus 200 g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~fd~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~ 279 (529)
|+++|+||.+.++ ...|||++.++|+|+| ++++++++|.|+||+ +++||. .|.++. .+..
T Consensus 234 Gis~flVp~~~p~--~~~~Gv~i~~~~~~~G---~rgt~s~~v~fddv~---~~llG~------~g~G~~------~~~~ 293 (541)
T 3djl_A 234 GLSCFFVPRFLPD--GQRNAIRLERLKDKLG---NRSNASCEVEFQDAI---GWLLGL------EGEGIR------LILK 293 (541)
T ss_dssp EEEEEEEESBCTT--SCBCSEEEEEECCCSS---CTTSCEEEEEEEEEE---EEEESS------TTCHHH------HTHH
T ss_pred ceEEEEEecCCCC--CCcCCeEEeeccccCC---CcCCceeEEEEccce---eeeeec------CCchHH------HHHH
Confidence 8999999954322 1234999999999999 999999999999995 889984 565554 5567
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009669 280 TMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVT 359 (529)
Q Consensus 280 ~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~ 359 (529)
.+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++||.+|++|+++.+.+++++.+++++++.++..
T Consensus 294 ~l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~~fG~-------~i~~~p~vq~~La~~~~~~eaaral~~~aa~~~d~~- 365 (541)
T 3djl_A 294 MGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGN-------PLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDRR- 365 (541)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCCC-------chhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 788899999999999999999999999999999999 999999999999999999999999999998877631
Q ss_pred HHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccCcCCHHHHhhhhcccccccccHHHHHHHHHHHHH
Q 009669 360 QRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLM 439 (529)
Q Consensus 360 ~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~~~~~l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll 439 (529)
.+.......+..++++|+++++.+.+++++|+|+|||+||+++++++++|||++...+++|++++++..++|.++
T Consensus 366 -----~~~~~~~~~~~~~~~aK~~ase~a~~~~~~a~q~~Gg~G~~~e~~l~r~~Rda~~~~i~eGt~ei~~~~i~r~l~ 440 (541)
T 3djl_A 366 -----ADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLN 440 (541)
T ss_dssp -----TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHH
T ss_pred -----CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCcHHHHHHhhhhhheeCCcHHHHHHHHHHHHH
Confidence 110001235677899999999999999999999999999999999999999999999999999999999999987
Q ss_pred HH
Q 009669 440 KT 441 (529)
Q Consensus 440 ~~ 441 (529)
+.
T Consensus 441 ~~ 442 (541)
T 3djl_A 441 KQ 442 (541)
T ss_dssp HC
T ss_pred hC
Confidence 54
No 36
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=100.00 E-value=6.6e-46 Score=388.91 Aligned_cols=351 Identities=13% Similarity=0.038 Sum_probs=277.8
Q ss_pred HHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhhcC------------C
Q 009669 33 QVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------------E 95 (529)
Q Consensus 33 ~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~~------------~ 95 (529)
++++++++|+.. +... ....+.......++|+.+.+.|| |+++||.+.++.. .
T Consensus 11 ~l~~~~~~~~~~---~~~~-------~~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~ 80 (394)
T 2rfq_A 11 EVMQRLDALLPT---LRER-------AQETEDLRRIPDDSMKALQETGFFRLLQPEQWGGYQADPVLFYSAVRKIASACG 80 (394)
T ss_dssp HHHHHHHHHHHH---HHHT-------HHHHHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHH---HHHh-------HHHHHhcCCCCHHHHHHHHHCCCceecCchhhCCCCCCHHHHHHHHHHHHhhCh
Confidence 688899988863 1110 11122222234578999998887 6888886644321 1
Q ss_pred cchh--hhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEecCCCCcee
Q 009669 96 PAFT--DLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPTLTSSK 173 (529)
Q Consensus 96 ~~~~--~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLntp~~~G~K 173 (529)
+.++ .+| .++...|..+|+++||++|+| +|+.++|+++| | .|+|+++ +|+|+|| |+|
T Consensus 81 ~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~---~g~~~~~~a~t-p---------~t~A~~~--~~g~~ln-----G~K 139 (394)
T 2rfq_A 81 STGWVSSII-GVHNWHLALFSQQAQEDVWGN---DTDVRISSSYA-P---------MGAGQVV--DGGYTVN-----GAW 139 (394)
T ss_dssp HHHHHHHHH-HHHHHHHTTSCHHHHHHHHSS---CTTCCEEEECS-C---------SEEEEEE--TTEEEEE-----EEE
T ss_pred hHHHHHHHH-HHHHHHHHhCCHHHHHHHhCC---CCCeEEEeccC-C---------CceEEEe--CCeEEEe-----eeE
Confidence 2232 333 366778889999999999999 79999999998 3 6899998 7899999 999
Q ss_pred eccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEecceecCccc
Q 009669 174 WWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQ 253 (529)
Q Consensus 174 ~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~fd~vrVP~~~ 253 (529)
+|++| +..||+++|+|+++.+++.+|+++|+|| .+ ||++.+.|+++| ++++++++|.||||+||.++
T Consensus 140 ~~is~-a~~Ad~~~v~a~~~~~g~~~~~~~flV~-------~~--gv~v~~~~~~~G---~~~~~~~~v~fd~v~Vp~~~ 206 (394)
T 2rfq_A 140 AWSSG-CDHASWAVLGGPVIKDGRPVDFVSFLIP-------RE--DYRIDDVWNVVG---LRGTGSNTVVVEDVFVPTHR 206 (394)
T ss_dssp EEETT-GGGCSEEEEEEEEEETTEEEEEEEEEEE-------GG--GCEEECCCCBSS---CGGGCCEEEEEEEEEEEGGG
T ss_pred eccCC-CcccceEEEeeeecCCCCCCceeEEEEE-------hh--hcEEeCCccccc---cccCCCCceEEcceEcChHH
Confidence 99999 8999999999998544444589999999 43 899999999999 99999999999999999999
Q ss_pred ccccccccCC--CCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcce---ecCCCCCCCcccccchH
Q 009669 254 MLMRVSQVTR--EGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRR---QFGSKNGGPETQVIDYK 328 (529)
Q Consensus 254 lL~~~~~v~~--~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~---qFg~~~~~~e~~i~~~q 328 (529)
+|+....... .|...... .. .....+...|+.+++.++|+++++++.+++|+++|+ |||+ ||++||
T Consensus 207 ~lg~~~~~~g~~~g~~~~~g-~~-~~~~~~~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~~~~fG~-------~i~~~q 277 (394)
T 2rfq_A 207 VLSFKAMSNLTAPGLERNTA-PV-YKMPWGTIHPTTISAPIVGMAYGAYDAHVEHQGKRVRAAFAGE-------KAKDDP 277 (394)
T ss_dssp EEEHHHHHTTCCGGGTTCCC-GG-GGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTC-------GGGSCH
T ss_pred hcccccccccCCCCcccCCC-cc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCCCCCc-------ccccCH
Confidence 9974110000 11000000 00 222345678999999999999999999999999999 9999 999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccCcC
Q 009669 329 TQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSS 408 (529)
Q Consensus 329 ~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~~~~ 408 (529)
.+|++|++|.+.+++++.+++++++.++.... .+.. ...+....++++|.++++.+.++++.|+|+|||+||++++
T Consensus 278 ~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~---~g~~-~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~ 353 (394)
T 2rfq_A 278 FAKVRIAEASSDIDAAWRQLSGNVADEYALLV---AGEE-VPFELRLRARRDQVRATGRAISSIDKLFESSGATALANGT 353 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhhcCC
Confidence 99999999999999999999999988764321 1221 1134566789999999999999999999999999999999
Q ss_pred CHHHHhhhhcccccccc-cHHHHHHHHHHHHHH
Q 009669 409 GLPELFAVYVPACTYEG-DNIVLLLQVARFLMK 440 (529)
Q Consensus 409 ~l~~~~rd~~~~~~~eG-~~~vl~~~ia~~ll~ 440 (529)
+++++|||++...+++| ++++++..+++.+++
T Consensus 354 ~l~r~~Rda~~~~~~~g~~~~~~~~~i~~~llg 386 (394)
T 2rfq_A 354 PLQRFWRDAHAGRVHAANDPERAYVMYGTGEFG 386 (394)
T ss_dssp HHHHHHHHHHHHTTSGGGCHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHcccccCchhHHHHHHHHHhC
Confidence 99999999999999999 999999999999874
No 37
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=100.00 E-value=6.1e-46 Score=392.74 Aligned_cols=352 Identities=13% Similarity=0.026 Sum_probs=278.4
Q ss_pred HHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CHHHHhHhhhhcC------------C
Q 009669 33 QVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------------E 95 (529)
Q Consensus 33 ~lr~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~g~-----~~~~gg~~~~~~~------------~ 95 (529)
++++.+++|+.. +... ....+.......++|+.+.+.|| |+++||.+.++.. .
T Consensus 39 ~l~~~~r~~~~~---~~~~-------a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~ 108 (422)
T 2jbr_A 39 SMLEKIQQILPQ---IAKN-------AESAEQLRRVPDENIKLLKEIGLHRAFQPKVYGGLEMSLPDFANCIVTLAGACA 108 (422)
T ss_dssp CHHHHHHHHHHH---HHHT-------HHHHHHHTSCCHHHHHHHHHTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHH---HHHh-------hHHHHHcCCCCHHHHHHHHHCCchhcCCchhcCCCCCCHHHHHHHHHHHHhhCc
Confidence 578888888753 1110 11112222234568999999887 6888886644321 1
Q ss_pred cchh--hhhhhchHHHHhcCCCHHHHHhHhHHhhccceeeeeecCCCCCCCCCCCCceEEEEeCCCCeEEEecCCCCcee
Q 009669 96 PAFT--DLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPTLTSSK 173 (529)
Q Consensus 96 ~~~~--~~~~~l~~~~i~~~gt~eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~~~~~TtAt~d~~~~~~vLntp~~~G~K 173 (529)
+.++ ..| .++...|..+|+++||++|+|. |+.++|+++| | +|+|+++ +|+|+|| |+|
T Consensus 109 ~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~---g~~~~a~a~t-p---------~t~A~~~--~~g~~ln-----G~K 167 (422)
T 2jbr_A 109 GTAWAFSLL-CTHSHQIAMFSKQLQDEIWLKD---PDATASSSIA-P---------FGKVEEV--EGGIILN-----GDY 167 (422)
T ss_dssp HHHHHHHHH-HHHHHHHTTSCHHHHHHHHTTC---TTCCEEEECS-C---------CSEEEEE--TTEEEEE-----EEE
T ss_pred CHHHHHHHH-HHHHHHHHhCCHHHHHHHHccC---CCeEEEeecC-C---------CeeEEEe--CCEEEEe-----eeE
Confidence 3332 233 4677788999999999999996 8999999998 3 5899998 8899999 999
Q ss_pred eccCCCCCCCcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccCCCCcceEEecceecCccc
Q 009669 174 WWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQ 253 (529)
Q Consensus 174 ~~v~~l~~~A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~~~~~~~v~fd~vrVP~~~ 253 (529)
+|++| +..||+++|+|++..+++..|+++|+|| .+ ||++.+.|+++| ++++++++|.||||+||.++
T Consensus 168 ~~is~-a~~Ad~~~v~a~~~~~~g~~g~~~flV~-------~~--gv~v~~~~~~~G---~r~~~~~~v~fddv~VP~~~ 234 (422)
T 2jbr_A 168 GWSSG-CDHAEYAIVGFNRFDADGNKIYSFGVIP-------RS--DYEIVDNWYAQA---IKSSGSKMLKLVNVFIPEYR 234 (422)
T ss_dssp EEETT-GGGCSEEEEEEEEECTTSCEEEEEEEEE-------GG--GCEEECCCCBSS---SGGGCCEEEEEEEEEEEGGG
T ss_pred eeecC-CccccEEEEEEEecCCCCCceeEEEEEE-------cC--ceEEeCCccccC---cCCCCCCcEEEeeEEecHHH
Confidence 99999 8999999999998754344689999999 43 899999999999 99999999999999999999
Q ss_pred ccccccccC--CCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcce--ecCCCCCCCcccccchHH
Q 009669 254 MLMRVSQVT--REGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRR--QFGSKNGGPETQVIDYKT 329 (529)
Q Consensus 254 lL~~~~~v~--~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~--qFg~~~~~~e~~i~~~q~ 329 (529)
+|+....+. ..|.+....... .....+...|+.+++.++|+++++++.+++|+++|+ |||+ ||++||.
T Consensus 235 ~lg~~~~~~g~~~g~g~~~~~~~-~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~~fG~-------~i~~~q~ 306 (422)
T 2jbr_A 235 ISKAKDMMEGKSAGFGLYPDSKI-FYTPYRPYFASGFSAVSLGIAERMIEAFKEKQRNRVRAYTGA-------NVGLATP 306 (422)
T ss_dssp EEEHHHHHHTCSTTTTSCTTCSS-SSSCHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTCBCTTTCC-------BCTTCHH
T ss_pred eecccccccCCCCcccccCCCcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-------ccccCHH
Confidence 998521100 013220000000 223456678999999999999999999999999998 9999 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccCcCC
Q 009669 330 QQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSSG 409 (529)
Q Consensus 330 ~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~~~~~ 409 (529)
+|++|++|.+.+++++.+++++++.++.... .+.. ...+....++++|+++++.+.++++.|+|+|||+||+++++
T Consensus 307 vq~~la~~~~~~~aar~~~~~aa~~~d~~~~---~g~~-~~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~g~~~~~~ 382 (422)
T 2jbr_A 307 ALMRIAESTHQVAAARALLEKTWEDHRIHGL---NHQY-PNKETLAFWRTNQAYAVKMCIEAVDRLMAAAGATSFMDNSE 382 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGBTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHhhhcCCc
Confidence 9999999999999999999999988764321 1221 11345667899999999999999999999999999999999
Q ss_pred HHHHhhhhcccccccccH-HHHHHHHHHHHHH
Q 009669 410 LPELFAVYVPACTYEGDN-IVLLLQVARFLMK 440 (529)
Q Consensus 410 l~~~~rd~~~~~~~eG~~-~vl~~~ia~~ll~ 440 (529)
++++|||++...+++|++ ++++..+++.+++
T Consensus 383 l~r~~Rda~~~~~~~G~~~e~~~~~ia~~~lg 414 (422)
T 2jbr_A 383 LQRLFRDAHMTGAHAYTDYDVCAQILGRELMG 414 (422)
T ss_dssp HHHHHHHHHHHTSSTTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCccchhHHHHHHHHHHhC
Confidence 999999999999999999 9999999999874
No 38
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=100.00 E-value=4.9e-34 Score=304.98 Aligned_cols=272 Identities=10% Similarity=0.063 Sum_probs=213.4
Q ss_pred CHHHHHhHhHHhhccceeeeeecCCCCCC--------CCCCCCceEEE-EeCCCCeEEEecCCCCceeeccCCCCCCCcE
Q 009669 115 TDEQHQKWLPLAYKMEIIGCYAQTELGHG--------SNVQGLETTAT-FDPQTDEFVIHSPTLTSSKWWPGGLGKVSTH 185 (529)
Q Consensus 115 t~eq~~~~L~~i~~g~~~~~~a~tE~~~G--------sd~~~~~TtAt-~d~~~~~~vLntp~~~G~K~~v~~l~~~A~~ 185 (529)
.+|||++|||++++|++++|+|+|||+.| ||+. +.|+++ ++ +|+|||| |+|+|+|| ..||+
T Consensus 122 ~~eqk~~~L~~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~~~~~~~~--gdg~Vln-----G~K~~iT~--~~Ad~ 191 (481)
T 2yyk_A 122 FAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPY-IPVGVVKQT--EKGIVVR-----GARMTATF--PLADE 191 (481)
T ss_dssp GHHHHHHHHHHHHHHTCCEEEEECCCCCCTTC----CCCSC-SBCEEEEEC--SSEEEEE-----EEEEEEEC--CCSSE
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeECCCCCCCCCccccCCcc-cceEEEEEE--CCEEEEE-----eEEEEecc--ccccE
Confidence 47999999999999999999999999976 6775 777775 55 8999999 99999998 88999
Q ss_pred EEEEEEEecC-CCCcceEEEEEEeccCCCCCCCCCeEEc--ccCCc--------ccccccCC-CCcceEEecceecCccc
Q 009669 186 AVVYARLITD-GQDHGVNGFIVQLRSLEDHSPLPGITIG--DIGMK--------FGNGAYNT-MDNGVLRFEHVRIPRNQ 253 (529)
Q Consensus 186 ~lV~Ar~~~~-g~~~g~~~flV~~rd~~~~~~~pGv~i~--~~~~k--------~G~~~~~~-~~~~~v~fd~vrVP~~~ 253 (529)
++|+|+++.+ +...++.+|+|| .+.|||++. +.+.+ +| .+. .+++.|.||||+||.+|
T Consensus 192 ~iV~art~~~~~~~~~~s~flVp-------~dtpGv~v~~r~~~~~~~s~~d~~lg---~r~~~~~~~v~FddV~VP~e~ 261 (481)
T 2yyk_A 192 VLIFPSILLQAGSEKYALAFALP-------TSTPGLHFVCREALVGGDSPFDHPLS---SRVEEMDCLVIFDDVLVPWER 261 (481)
T ss_dssp EEECCCSCCCTTCGGGCEEEEEE-------TTCTTEEEEECCCCCCCSCTTTCTTT---TTCCCCEEEEEEEEEEEEGGG
T ss_pred EEEEEecCCCCCCCCeEEEEEEE-------CCCCCEEEEeccccccCCcccccccc---ccCCCCeEEEEEccEEECHHH
Confidence 9999998642 223568999999 889999994 33322 34 443 56788999999999999
Q ss_pred ccccccccCCCCceeccCchhhHH--HHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcccccchHHHH
Q 009669 254 MLMRVSQVTREGKYVQSNVPRQLL--YGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQ 331 (529)
Q Consensus 254 lL~~~~~v~~~g~~~~~~~~~~~~--~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~~~q~~q 331 (529)
+|+- + +.|.+.. .. ...+..+|+..++.++|.++.++.++.+|+.. | +|.+||.+|
T Consensus 262 vl~~-G---~~~~g~~------~~~~~~~l~~~r~~~~~~~~g~a~~~lg~a~~~~~~---~---------gi~~~q~vq 319 (481)
T 2yyk_A 262 VFIL-G---NVELCNN------AYGATGALNHMAHQVVALKTAKTEAFLGVAALMAEG---I---------GADVYGHVQ 319 (481)
T ss_dssp EEEE-S---CHHHHHH------HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T---------TGGGSHHHH
T ss_pred ccCC-C---CccHHHH------HHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHh---c---------ChhhhHHHH
Confidence 9831 0 1222211 11 35567889999999999999999999988863 2 588999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccCcCCHH
Q 009669 332 NRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSSGLP 411 (529)
Q Consensus 332 ~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~~~~~l~ 411 (529)
++|++|.+.+++++++++++++..+ ..+..........++++|.++++.+.++++.|+|+|||.|++ .+++
T Consensus 320 ~~laem~~~leaar~l~~~aa~~~d-------~~~~G~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p~e 390 (481)
T 2yyk_A 320 EKIAEIIVYLEAMRAFWTRAEEEAK-------ENAYGLLVPDRGALDGARNLYPRLYPRIREILEQIGASGLIT--LPSE 390 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCE-------ECTTSCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSC--CCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccc-------ccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHhCccccc--CccH
Confidence 9999999999999999999987542 101111012245688999999999999999999999998888 7877
Q ss_pred HHhhhhcccc------cccccHHHHHHHHHHHH
Q 009669 412 ELFAVYVPAC------TYEGDNIVLLLQVARFL 438 (529)
Q Consensus 412 ~~~rd~~~~~------~~eG~~~vl~~~ia~~l 438 (529)
++| +..... ...|.+++++.+++|.+
T Consensus 391 ~~~-~~~i~~~l~~~l~~~g~~~~~r~~i~rl~ 422 (481)
T 2yyk_A 391 KDF-KGPLGPFLEKFLQGAALEAKERVALFRLA 422 (481)
T ss_dssp HHH-HSTTHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred HHh-ChhhhHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 777 764322 23499999999999854
No 39
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=4.5e-34 Score=305.71 Aligned_cols=275 Identities=12% Similarity=0.003 Sum_probs=208.1
Q ss_pred HHhcCCC--HHHHHhHhHHhhccceeeeeecCCCCCC--------CCC-CCCceEEEEeCCCCeEEEecCCCCceeeccC
Q 009669 109 AIKGQGT--DEQHQKWLPLAYKMEIIGCYAQTELGHG--------SNV-QGLETTATFDPQTDEFVIHSPTLTSSKWWPG 177 (529)
Q Consensus 109 ~i~~~gt--~eq~~~~L~~i~~g~~~~~~a~tE~~~G--------sd~-~~~~TtAt~d~~~~~~vLntp~~~G~K~~v~ 177 (529)
.+..+|| +|||++|||++++|++++|+|+|||+.| ||+ ..+. +|+++ +|+|||| |+|+|+|
T Consensus 119 ~~~~~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~-~a~r~--gdg~vln-----G~K~~iT 190 (490)
T 1u8v_A 119 IDQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLR-IVEKR--EDGIVVR-----GAKAHQT 190 (490)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCE-EEEEC--SSEEEEE-----EEECSCT
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCCcccccccCCcccceE-EEEEE--CCEEEEE-----eEEEEee
Confidence 3458999 9999999999999999999999999874 775 3454 78877 8999999 9999999
Q ss_pred CCCCCCcEEEEEEEEecC-CCCcceEEEEEEeccCCCCCCCCCeEEc---ccCCc----------cccccc-CC-CCcce
Q 009669 178 GLGKVSTHAVVYARLITD-GQDHGVNGFIVQLRSLEDHSPLPGITIG---DIGMK----------FGNGAY-NT-MDNGV 241 (529)
Q Consensus 178 ~l~~~A~~~lV~Ar~~~~-g~~~g~~~flV~~rd~~~~~~~pGv~i~---~~~~k----------~G~~~~-~~-~~~~~ 241 (529)
| +..||+++|+|++..+ +...++.+|+|| .+.|||++. +.+.+ +| . +. ..++.
T Consensus 191 ~-a~~Ad~~iV~art~~~~~~~~~~s~flVp-------~d~pGv~v~~~r~~~~~~~~~~~~d~~lg---~~r~~~~~~~ 259 (490)
T 1u8v_A 191 G-SINSHEHIIMPTIAMTEADKDYAVSFACP-------SDADGLFMIYGRQSCDTRKMEEGADIDLG---NKQFGGQEAL 259 (490)
T ss_dssp T-CTTCSEEEECCSSCCCGGGGGGCEEEEEE-------TTCTTEEEEECCCTTGGGGGSTTCCGGGS---SSSCCCCCEE
T ss_pred C-CcccCEEEEEEecCCCCCCCCeEEEEEEE-------CCCCCEEEEecccccccccccccccCCcc---ccccCCceEE
Confidence 9 8999999999997532 223457899999 889999994 44443 55 4 42 56788
Q ss_pred EEecceecCcccccccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCc
Q 009669 242 LRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPE 321 (529)
Q Consensus 242 v~fd~vrVP~~~lL~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e 321 (529)
|.||||+||.+++|+. + +.|.++. .....+...|+.+++.+++.+..++.++.+... .|
T Consensus 260 v~FddV~VP~e~vl~~-g---~~~~g~~------~~~~~~~~~r~~~~a~~~~~~~~~lG~a~~~~~---~~-------- 318 (490)
T 1u8v_A 260 VVFDNVFIPNDRIFLC-Q---EYDFAGM------MVERFAGYHRQSYGGCKVGVGDVVIGAAALAAD---YN-------- 318 (490)
T ss_dssp EEEEEEEEEGGGEEEE-S---CGGGHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH--------
T ss_pred EEECceEeCHHHccCC-C---ChhHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc--------
Confidence 9999999999999831 0 2233222 233444567777766666666666665554332 13
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhcc
Q 009669 322 TQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGG 401 (529)
Q Consensus 322 ~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG 401 (529)
+|.+||.+|++|++|.+.+++++++++++++..+ ..+..........++++|.++++.+.++++.++|+|||
T Consensus 319 -gi~~~q~vq~~laem~~~leaar~l~~~aa~~~d-------~~~~g~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg 390 (490)
T 1u8v_A 319 -GAQKASHVKDKLIEMTHLNETLYCCGIACSAEGY-------PTAAGNYQIDLLLANVCKQNITRFPYEIVRLAEDIAGG 390 (490)
T ss_dssp -TCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCE-------ECTTSCEECCHHHHHHHHHHHTTHHHHHHHHHHHHHCT
T ss_pred -CchhcHHHHHHHHHHHHHHHHHHHHHHHHHHccc-------ccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 4789999999999999999999999999987542 10111101224568899999999999999999999999
Q ss_pred ccccCcCCHHHHhhhh-cccccccccHHHHHHH
Q 009669 402 HGYLCSSGLPELFAVY-VPACTYEGDNIVLLLQ 433 (529)
Q Consensus 402 ~Gy~~~~~l~~~~rd~-~~~~~~eG~~~vl~~~ 433 (529)
.||+ +|++++|||. +.+.++|.....++..
T Consensus 391 ~g~~--~p~er~~rd~~~~~~~~~~~~~~l~~~ 421 (490)
T 1u8v_A 391 LMVT--MPSEADFKSETVVGRDGETIGDFCNKF 421 (490)
T ss_dssp HHHH--CCCHHHHTCCCBCSTTSCBHHHHHHHH
T ss_pred chhc--ChHHHHHhCchhccccchhHHHHHHHH
Confidence 9998 7888888887 7777777665555543
No 40
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=99.97 E-value=1.8e-29 Score=269.78 Aligned_cols=276 Identities=12% Similarity=-0.003 Sum_probs=192.6
Q ss_pred CCC--HHHHHhHhHHhhccceeeeeecCCCCC--------CCCCCCCceEEEEeCCCCeEEEecCCCCceeeccCCCCCC
Q 009669 113 QGT--DEQHQKWLPLAYKMEIIGCYAQTELGH--------GSNVQGLETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKV 182 (529)
Q Consensus 113 ~gt--~eq~~~~L~~i~~g~~~~~~a~tE~~~--------Gsd~~~~~TtAt~d~~~~~~vLntp~~~G~K~~v~~l~~~ 182 (529)
.|+ .||+++|||.+++|++++|+|+|||+. |||+ .+.|++ .+ +|+|||| |+|+|++| +..
T Consensus 127 ~~~~~~eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~~~-~~--gdg~Vln-----G~K~~iT~-a~~ 196 (515)
T 3hwc_A 127 EGRNLTQNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRIVE-KT--DDGIIVN-----GVKAVGTG-IAF 196 (515)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEEEE-EC--SSEEEEE-----EEEEEEES-GGG
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEEEE-EE--CCEEEEE-----EEEEEECC-ccc
Confidence 454 578899999999999999999999986 5788 565543 34 7899999 99999999 899
Q ss_pred CcEEEEEEEEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccccC----------CCCcceEEecceecCcc
Q 009669 183 STHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYN----------TMDNGVLRFEHVRIPRN 252 (529)
Q Consensus 183 A~~~lV~Ar~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~~~----------~~~~~~v~fd~vrVP~~ 252 (529)
||+++|+|+++.....+++.+|+|| .+.|||++...+.++| .+ +...+.|.||||+||.+
T Consensus 197 Ad~~lV~a~t~~~~~~~~~s~FlVp-------~d~pGv~v~~~~~~~G---~~~~d~~ls~~~~~~~a~v~FddV~VP~e 266 (515)
T 3hwc_A 197 GDYMHIGCLYRPGIPGEQVIFAAIP-------TNTPGVTVFCRESTVK---NDPAEHPLASQGDELDSTTVFDNVFIPWE 266 (515)
T ss_dssp CSEEEECCCCCTTCCGGGCEEEEEE-------TTCTTEEEEECCCCCC---SCTTTCTTTTSCCCCEEEEEEEEEEEEGG
T ss_pred cCEEEEEEEecCCCCCCeEEEEEEE-------CCCCCeEEeecccccC---ccccccccccccCCceEEEEECceEECHH
Confidence 9999999987332222238999999 8899999987666655 22 12367899999999999
Q ss_pred ccc--ccccccCCCCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcccccchHHH
Q 009669 253 QML--MRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQ 330 (529)
Q Consensus 253 ~lL--~~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~~~q~~ 330 (529)
++| |. .|.++. .+...+...+...+...++.+..++.++.+++. +| +|.+||.+
T Consensus 267 ~vl~~Ge------~g~g~~------~~~~~~~~~~r~~~~~~~~~a~~~lG~A~~~~e---~~---------gI~~fQ~V 322 (515)
T 3hwc_A 267 QVFHIGN------PEHAKL------YPQRIFDWVHYHILIRQVLRAELIVGLAILITE---HI---------GTSKLPTV 322 (515)
T ss_dssp GEEEESC------TTGGGT------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH---------TCTTSHHH
T ss_pred HccCCCC------ccHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hc---------CCcccHHH
Confidence 999 42 343332 221222222111112334444444444444432 23 47899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccCcCC-
Q 009669 331 QNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSSG- 409 (529)
Q Consensus 331 q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~~~~~- 409 (529)
|++|++|.+.+++++++++++++..+ ..+..........++++|.++++.+.++++.++|+|||.+++..+.
T Consensus 323 q~kLAem~~~lEaaR~l~~~Aa~~~d-------~~~~G~~~p~~~~as~AK~~ase~~~rv~~~a~qi~GG~~i~~Ps~~ 395 (515)
T 3hwc_A 323 SARVAKLVAFHLAMQAHLIASEETGF-------HTKGGRYKPNPLIYDFGRAHFLQNQMSVMYELLDLAGRSSLMIPSEG 395 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCE-------ECTTCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTSCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc-------cccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCCCHH
Confidence 99999999999999999998876432 1111111122345899999999999999999999999999985432
Q ss_pred ------HHHHhhhhcccccccccHHHHHHHHHHHHH
Q 009669 410 ------LPELFAVYVPACTYEGDNIVLLLQVARFLM 439 (529)
Q Consensus 410 ------l~~~~rd~~~~~~~eG~~~vl~~~ia~~ll 439 (529)
+..++..............+-..+++..+.
T Consensus 396 d~~~pe~~~~l~ky~~g~~~~a~~R~kl~rl~~d~~ 431 (515)
T 3hwc_A 396 QWDDSQSGQWFVKLNNGPKGNPRERVQIGRVIRDLY 431 (515)
T ss_dssp HHHCTTTHHHHHHHTCCTTCCTHHHHHHHHHHHHHH
T ss_pred HhcCchhHHHHHHHhCCCCCCHHHHHHHHHHHHHHh
Confidence 344444444433345555555566666664
No 41
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=99.90 E-value=5.1e-22 Score=212.52 Aligned_cols=245 Identities=11% Similarity=-0.023 Sum_probs=176.4
Q ss_pred HHHHhHhHHhhccceeeeeecCCCCCCCCC-----CCCceE-EEEeCCCCeEEEecCCCCceeeccCCCCCCCcEEEEEE
Q 009669 117 EQHQKWLPLAYKMEIIGCYAQTELGHGSNV-----QGLETT-ATFDPQTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYA 190 (529)
Q Consensus 117 eq~~~~L~~i~~g~~~~~~a~tE~~~Gsd~-----~~~~Tt-At~d~~~~~~vLntp~~~G~K~~v~~l~~~A~~~lV~A 190 (529)
+...+|+..+.+..+..+.++|.|-..-.. ...-.. ..++ +|||||| |.|.|+|| +..||+++|++
T Consensus 134 ~n~~~y~~~~~~~DL~~~~a~~dPk~dRs~~~~~q~d~~l~Vve~~--~dGiVVn-----GaK~~~T~-a~~Ad~i~V~a 205 (517)
T 4g5e_A 134 KNIVDFVNFAKKHDLNCAPQFVDPQMDRSNPDAQQRSPGLRVIEKN--DKGIVVS-----GVKAIGTG-VAFADWIHIGV 205 (517)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCCCC-----------CBCEEEEEC--SSEEEEE-----EEEEEEES-GGGCSEEEECC
T ss_pred HHHHHHHHHHHhcCceeeeeeeCCCCCCCCCchhcCCCceEEEEEc--CCeEEEe-----eEehhhcC-ccccCEEEEEe
Confidence 445789999999999999999998632111 111122 2233 6899999 99999999 99999999999
Q ss_pred EEecCCCCcceEEEEEEeccCCCCCCCCCeEEcccCCcccccc------cCCC-CcceEEecceecCcccccccccccCC
Q 009669 191 RLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGA------YNTM-DNGVLRFEHVRIPRNQMLMRVSQVTR 263 (529)
Q Consensus 191 r~~~~g~~~g~~~flV~~rd~~~~~~~pGv~i~~~~~k~G~~~------~~~~-~~~~v~fd~vrVP~~~lL~~~~~v~~ 263 (529)
++....+.++...|+|| .+.|||++.......+.+. .++. ..+.|.||||+||.++++.- + +
T Consensus 206 ~t~~~~~~d~~~~F~VP-------~dtPGv~~i~r~~~~~~~~~d~pl~~r~~e~da~vvFDdV~VP~e~Vf~~-G---e 274 (517)
T 4g5e_A 206 FFRPGIPGDQIIFAATP-------VNTPGVTIVCRESVVKEDPIEHPLASQGDELDGMTVFDNVFIPWSHVFHL-G---N 274 (517)
T ss_dssp CCCTTCCGGGCEEEEEE-------TTCTTEEEEECCCCCCSCTTTCTTGGGCCCCEEEEEEEEEEEEGGGEEEE-S---C
T ss_pred ecCCCCCccceEEEEEe-------cCCCCeEEEecccccCCCccccccccccCCcceEEEecceeccHHHcccc-C---C
Confidence 98766555678899999 8999999854433333000 1121 23679999999999998731 0 2
Q ss_pred CCceeccCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcceecCCCCCCCcccccchHHHHHHHHHHHHHHHH
Q 009669 264 EGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYA 343 (529)
Q Consensus 264 ~g~~~~~~~~~~~~~~~l~~~r~~~aa~~~G~~~~al~~av~Ya~~R~qFg~~~~~~e~~i~~~q~~q~rLa~~~a~~~a 343 (529)
.+.... .....+...|...++..++.++.++..+..++.. + .|.+||.+|++|++|.+.+++
T Consensus 275 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~ae~---~---------Gi~~fq~Vq~kLaEm~~~~E~ 336 (517)
T 4g5e_A 275 PEHAKL------YPQRVFDWLHYHALIRQSVRAELMAGLAILITEH---I---------GTNKIPAVQTRVAKLIGFHQA 336 (517)
T ss_dssp TTHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H---------TCTTSHHHHHHHHHHHHHHHH
T ss_pred hhHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---h---------CCcccHHHHHHHHHHHHHHHH
Confidence 232221 3445566777777777888888888888888753 3 368999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCC-hhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccC
Q 009669 344 FRFVGEWLKWLYTDVTQRLQANDFST-LPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLC 406 (529)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~~ 406 (529)
++++++.++..- ...+... .|+ ...++++|.++++.+.+++++++|++||.|++.
T Consensus 337 ~ral~~aaa~~a-------~~~~~G~~~P~-~~~a~~aK~~a~~~~~rv~~eaiqi~GG~g~~~ 392 (517)
T 4g5e_A 337 MLAHIVASEELG-------FHTPGGAYKPN-ILIYDFGRALYLENFSQMIYELVDLSGRSALIF 392 (517)
T ss_dssp HHHHHHHHHHTC-------EECTTCCEECC-HHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTCC
T ss_pred HHHHHHHHHHhc-------ccCCCCCcCcC-HHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC
Confidence 998887664311 1111111 222 345788999999999999999999999999984
No 42
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=90.57 E-value=1.8 Score=46.89 Aligned_cols=125 Identities=7% Similarity=-0.029 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHhhcceecCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHH
Q 009669 296 LSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHA 375 (529)
Q Consensus 296 ~~~al~~av~Ya~~R~qFg~~~~~~e~~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (529)
+...+..++.++.+| ||+ .|.+-|.+..||+++.+.+|++.+.+.++...+... +. +....
T Consensus 467 ~~~~~~~~~~~~~~~--~~~-------~~~~~q~~l~~~ad~~~~~y~~~~~~~r~~~~~~~~------~~----~~~~~ 527 (597)
T 3owa_A 467 AKKIGLMVAGLAAQK--YGK-------ALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTT------GL----EKNKQ 527 (597)
T ss_dssp HHHHHHHHHHHHHHH--HGG-------GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CS----GGGHH
T ss_pred HHHHHHHHHHHHHHH--hCC-------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc------Cc----cchHH
Confidence 333445566666655 455 788999999999999999999999988886655421 11 22344
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHhccccccCcCCHHHHhhhhcccccccccH-HHHHHHHHHHHHHH
Q 009669 376 CTAGLKSLTTTATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDN-IVLLLQVARFLMKT 441 (529)
Q Consensus 376 ~as~aK~~~~~~a~~~~~~~~q~~GG~Gy~~~~~l~~~~rd~~~~~~~eG~~-~vl~~~ia~~ll~~ 441 (529)
...++++||.+...++-..+.++. ..+...-.+-.++...+.+.-+...| ..++.+||+.++..
T Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 592 (597)
T 3owa_A 528 KVLYTEVFCQEAFNEIEAHAKETL--IAVENGDMLRMMLSSLRKLTRHTPLNVIPKKREIAAKILED 592 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HhhccchHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHc
Confidence 567889999999999999888887 34444333444444444444343333 45566777776644
No 43
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=53.40 E-value=90 Score=33.40 Aligned_cols=67 Identities=15% Similarity=-0.005 Sum_probs=48.3
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Q 009669 323 QVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCG 400 (529)
Q Consensus 323 ~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~G 400 (529)
.+.+.|.+..||++++..+|++..+..++.+.+.. +.. ........++.+|.+...++-..+.++..
T Consensus 509 ~~~~~~~~~~rl~d~~~~~y~~~~~l~r~~~~~~~-------g~~----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 575 (607)
T 2uxw_A 509 GIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSE-------GHP----TAQHEKMLCDTWCIEAAARIREGMAALQS 575 (607)
T ss_dssp GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------TCT----THHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCc----chHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77888999999999999999998887777554421 221 12223556788988888888777777443
No 44
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=25.25 E-value=6e+02 Score=26.53 Aligned_cols=97 Identities=12% Similarity=-0.006 Sum_probs=64.5
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHhccc
Q 009669 323 QVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGH 402 (529)
Q Consensus 323 ~i~~~q~~q~rLa~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as~aK~~~~~~a~~~~~~~~q~~GG~ 402 (529)
.+..-|.+-.++++++..+|++.....++... . . . ....++.++.+...++...+.+++-+
T Consensus 471 ~l~~~q~~l~~lad~~~~~~~~~~~l~r~~~~-----------~-~---~---~~~l~~~~~~~~~~~~~~~~~~~~~~- 531 (577)
T 2z1q_A 471 GVEEEQEVLGAVADILIDAYAAESALLRARRL-----------G-G---L---APVLARIYLAQALDRAQAGALSVLPR- 531 (577)
T ss_dssp GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------C-T---T---HHHHHHHHHHHHHHHHHHHHHHHGGG-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------c-C---c---HHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 44455788889999999999888776655321 0 0 1 35677889998888888888887744
Q ss_pred cccCcCCH---HHHhhhhcccccccccHHHHHHHHHHHHHHH
Q 009669 403 GYLCSSGL---PELFAVYVPACTYEGDNIVLLLQVARFLMKT 441 (529)
Q Consensus 403 Gy~~~~~l---~~~~rd~~~~~~~eG~~~vl~~~ia~~ll~~ 441 (529)
+....+. ...+|.. ......+++.+..+||+.++..
T Consensus 532 -~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ia~~~~~~ 570 (577)
T 2z1q_A 532 -LVEGDEARVVYSAARRL--TKREPGDLVALRRQAAEAVLEA 570 (577)
T ss_dssp -TCCTTTTHHHHHHHHHH--TCCCCCCHHHHHHHHHHHHHHH
T ss_pred -HHcCCchhHHHHHHHHh--cccCCCChHHHHHHHHHHHHhc
Confidence 3333222 2333433 2344557788899999998865
No 45
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=20.68 E-value=26 Score=35.55 Aligned_cols=59 Identities=12% Similarity=0.111 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHhccccccCcCCHHHHhhhhccccc--ccccHHHHHHHHHHHHHHHHHHhcC
Q 009669 384 TTTATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACT--YEGDNIVLLLQVARFLMKTVSQLGY 447 (529)
Q Consensus 384 ~~~~a~~~~~~~~q~~GG~Gy~~~~~l~~~~rd~~~~~~--~eG~~~vl~~~ia~~ll~~~~~~~~ 447 (529)
++..|.++.-+.+|+||+|||. +++++....-.++ |.|+- .-|.++...+++..++...
T Consensus 177 AA~rA~~AGFDgVEIH~AhGYL----l~QFLSp~tN~RtDeYGGS~-ENR~Rf~lEVi~aVr~~vg 237 (400)
T 4gbu_A 177 AAKNSIAAGADGVEIHSANGYL----LNQFLDPHSNTRTDEYGGSI-ENRARFTLEVVDALVEAIG 237 (400)
T ss_dssp HHHHHHHTTCSEEEEECCTTSH----HHHHHCTTTCCCCSTTSSSH-HHHTHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCcCeeeecccccch----HHheecCcCCCCccccCCcH-HHHHHHHHHHHHHHHHHcC
Confidence 4555666677788999999997 5677766655555 77764 4577888888888776643
Done!