BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009670
(529 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359484783|ref|XP_002270833.2| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 712
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 306/557 (54%), Positives = 394/557 (70%), Gaps = 31/557 (5%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
MT EE+ G + EDGV D FP+GMRVLAVDDD TCL +L+ LR CQY+VT TN+AITAL
Sbjct: 1 MTVEERKGGLAGEDGVKDPFPVGMRVLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITAL 60
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
KMLREN+NNFDLVISDV MPDMDGFKLLELVGLEMDLPV+MLS++SD KLVM+GI HGAC
Sbjct: 61 KMLRENKNNFDLVISDVSMPDMDGFKLLELVGLEMDLPVIMLSSHSDPKLVMRGITHGAC 120
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDG 180
DYLLKPVR+EELKN WQHVIRRKK+D KDQN+S + + + +G + D +G
Sbjct: 121 DYLLKPVRIEELKNIWQHVIRRKKIDSKDQNKSADQDNALHADGEGGEGPPSSSNADQNG 180
Query: 181 HENEN---------------------STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPK 219
N ++QKKPRVVW+ ELH KF+ AVN LG++KAVPK
Sbjct: 181 KLNRKRKDQNEDEEEEGEENGEENEDPSSQKKPRVVWSVELHRKFVAAVNQLGIEKAVPK 240
Query: 220 KILDLMNVEGLTRENVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGF 278
+ILDLMNVEGLTRENVASHLQK+RL LKR+ T +A MVA+ G+KDSSY+R+G+LDGF
Sbjct: 241 RILDLMNVEGLTRENVASHLQKYRLYLKRISCVATQQANMVAAFGAKDSSYMRMGSLDGF 300
Query: 279 GGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFN 338
G + PGRL+S+A+ SSY P M+GRLNS AGLS+ G+ SSG+I+ G +Q+ + S N
Sbjct: 301 GDFRGLAGPGRLNSTAM-SSYPPSGMLGRLNSPAGLSLRGLTSSGLIQTGHAQNSSNSVN 359
Query: 339 TIGKNQQAMFPANRNSNLVQGVQTSLEPNQMPQSES-TTHIGDFNHINSPTAFTAATGFI 397
T GK Q + P N++++L QG+ TSLE +Q+ Q + +T G+F+ +++ T FT A GF
Sbjct: 360 THGKLQPVVLPTNQSASLFQGIPTSLELDQLQQRKCISTQRGEFSSVDNTTVFTTANGFP 419
Query: 398 DARVAVGSSSSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSS 457
D+R+ V SSS+S+S + SN +MLQ+NP Q R NQSSL +LN + +GV SS
Sbjct: 420 DSRMTVHSSSNSLSNAPSNPLMLQSNPQQTLCRGGLANQSSLKAVTLNPEPYTMGVSGSS 479
Query: 458 NFLDHGRCQESWQDAVQLSKSSSISLPLGEPFILDQVPPN--KDNILSSNCY-----LDI 510
NFLDHGRC E+WQ A+QLSK S SLPL EP D + N +++I S+ + +D
Sbjct: 480 NFLDHGRCNENWQSALQLSKFPSNSLPLSEPLNCDPLTTNNLREHISSTGSHIRRSPIDF 539
Query: 511 SSSIANSTHLENSRGDL 527
S++ + LE+SRG++
Sbjct: 540 SATSVLAGPLEDSRGEM 556
>gi|298103722|emb|CBM42562.1| putative B-type response regulator 19 [Populus x canadensis]
Length = 685
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/562 (55%), Positives = 389/562 (69%), Gaps = 47/562 (8%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
MT E++ G +S + + FP+GMRVLAVDDD CLK+LE LR+CQYEVT TN+A+TAL
Sbjct: 1 MTVEDQRGCNSVNEKM---FPVGMRVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTAL 57
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+MLRENRN +DLVISDV MPDMDGFKLLELVGLEMDLPV+MLS++ D + V KGI HGA
Sbjct: 58 EMLRENRNKYDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSSHGDKEFVYKGITHGAV 117
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDED----- 175
DYLLKPVR+EELKN WQHVIRRKK P+DQN SP++ K DG E E
Sbjct: 118 DYLLKPVRLEELKNIWQHVIRRKKWYPQDQNGSPNQ-------DKGGDGAGEGEQVTSTG 170
Query: 176 -GDDDGHENEN--------------------STTQKKPRVVWTTELHTKFIGAVNLLGLD 214
GD +G N S QKKPRVVW+ ELH KF+ AVN LGLD
Sbjct: 171 SGDQNGKVNRKRKDQDEEEEGEGEDGNDNEESGNQKKPRVVWSVELHQKFVSAVNQLGLD 230
Query: 215 KAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLG-NKTLEAGMVASVGSKDSSYLRIG 273
KAVPKKILDLMNV+GLTRENVASHLQKFRL LKRL + MVA+ G+KDSSYLR+G
Sbjct: 231 KAVPKKILDLMNVDGLTRENVASHLQKFRLYLKRLSCGANQQPNMVAAFGAKDSSYLRMG 290
Query: 274 ALDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSF 333
+LDGFG SV+ PG+LS+++L SSY PGS++GRLNS GL++ GIAS G+++PG S+S
Sbjct: 291 SLDGFGDFRSVHGPGQLSTTSL-SSYPPGSLLGRLNSPGGLTLQGIASPGLLQPGHSRSL 349
Query: 334 NTSFNTIGKNQQAMFPANRNS-NLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTA 392
N NT+GK Q + NR S NL QG+ ++L+P + Q +S HIGDFNH T+FT
Sbjct: 350 NNPLNTLGKLQPCLLQTNRGSTNLFQGISSALDPKEF-QLKSMNHIGDFNHKGDATSFTL 408
Query: 393 ATGFIDARVAVGSSSSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLG 452
A F D +V +GS +++S++ +N ML NP Q Q+R + QSSL++ +LNQ FD+G
Sbjct: 409 AGCFPDVKVTIGSLGNTISSAANNPQMLHVNPQQNQTRRSLATQSSLSMPALNQESFDVG 468
Query: 453 VHDSSNFLDHGRCQESWQDAVQLSKSSSISLPLGEPFILDQVPPN--KDNILSSNCY--- 507
V SSNFLDH RC ++WQ VQ+S S SLPLGEPF D +PP+ +DNI S+ +
Sbjct: 469 VRGSSNFLDHSRCDDNWQGVVQMSTFPSNSLPLGEPFRHDPLPPSTRRDNISSTTSHIVN 528
Query: 508 --LDISSSIANSTHLENSRGDL 527
LD SSS + + LE+SR D+
Sbjct: 529 NPLDFSSSGSLTAPLEDSRLDM 550
>gi|147787458|emb|CAN60088.1| hypothetical protein VITISV_005486 [Vitis vinifera]
Length = 706
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 306/573 (53%), Positives = 394/573 (68%), Gaps = 47/573 (8%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYE----------- 49
MT EE+ G + EDGV D FP+GMRVLAVDDD TCL +L+ LR CQY+
Sbjct: 1 MTVEERKGGLAGEDGVKDPFPVGMRVLAVDDDPTCLMLLDGLLRRCQYQGLVLLCFARLL 60
Query: 50 -----VTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSA 104
VT TN+AITALKMLREN+NNFDLVISDV MPDMDGFKLLELVGLEMDLPV+MLS+
Sbjct: 61 LYMNFVTTTNQAITALKMLRENKNNFDLVISDVSMPDMDGFKLLELVGLEMDLPVIMLSS 120
Query: 105 YSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKR 164
+SD KLVM+GI HGACDYLLKPVR+EELKN WQHVIRRKK+D KDQN+S + +
Sbjct: 121 HSDQKLVMRGITHGACDYLLKPVRIEELKNIWQHVIRRKKIDSKDQNKSADQDNALHADG 180
Query: 165 KDQDGEDEDEDGDDDGHENEN---------------------STTQKKPRVVWTTELHTK 203
+ +G + D +G N ++QKKPRVVW+ ELH K
Sbjct: 181 EGGEGPPSSSNADQNGKLNRKRKDQNEDEEEEGEENGEENEDPSSQKKPRVVWSVELHRK 240
Query: 204 FIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGN-KTLEAGMVASV 262
F+ AVN LG++KAVPK+ILDLMNVEGLTRENVASHLQK+RL LKR+ T +A VA+
Sbjct: 241 FVAAVNQLGIEKAVPKRILDLMNVEGLTRENVASHLQKYRLYLKRISCVATQQANXVAAF 300
Query: 263 GSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASS 322
G+KDSSY+R+G+LDGFG + PGRL+S+A+ SSY P M+GRLNS AGLS+ G+ SS
Sbjct: 301 GAKDSSYMRMGSLDGFGDFRGLAGPGRLNSTAM-SSYPPSGMLGRLNSPAGLSLRGLTSS 359
Query: 323 GMIKPGLSQSFNTSFNTIGKNQQAMFPANRNSNLVQGVQTSLEPNQMPQSES-TTHIGDF 381
G+I+ G +Q+ + S NT GK Q + P N++++L QG+ TSLE +Q+ Q + +T IG+F
Sbjct: 360 GLIQTGHAQNSSNSVNTHGKLQPVVLPTNQSASLFQGIPTSLELDQLQQRKCISTQIGEF 419
Query: 382 NHINSPTAFTAATGFIDARVAVGSSSSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTV 441
+ +++ T FT A GF D+R+ V SSS+S+S + SN +MLQ+NP Q R NQSSL
Sbjct: 420 SSVDNTTVFTTANGFPDSRMTVHSSSNSLSNAPSNPLMLQSNPQQTLCRGGLANQSSLKA 479
Query: 442 ASLNQAYFDLGVHDSSNFLDHGRCQESWQDAVQLSKSSSISLPLGEPFILDQVPPN--KD 499
+LN + +GV SSNFLDHGRC E+WQ A+QLSK S SLPL EP D + N ++
Sbjct: 480 VTLNPEPYTMGVSGSSNFLDHGRCNENWQSALQLSKFPSNSLPLSEPLNRDPLTTNNLRE 539
Query: 500 NILSSNCY-----LDISSSIANSTHLENSRGDL 527
+I S+ + +D S++ + LE+SRG++
Sbjct: 540 HISSTGSHIRRSPIDFSATSXLAGPLEDSRGEM 572
>gi|224143990|ref|XP_002325148.1| type-b response regulator [Populus trichocarpa]
gi|222866582|gb|EEF03713.1| type-b response regulator [Populus trichocarpa]
Length = 707
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/557 (56%), Positives = 396/557 (71%), Gaps = 37/557 (6%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
MT E++ G +S + + FP+GMRVLAVDDD CLK+LE LR+CQYEVT TN+A+TAL
Sbjct: 1 MTVEDQRGCNSVNEKM---FPVGMRVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTAL 57
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+MLRENRN +DLVISDV MPDMDGFKLLELVGLEMDLPV+MLS++ D + V KGI HGA
Sbjct: 58 EMLRENRNKYDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSSHGDKEFVFKGITHGAV 117
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFE---------------------K 159
DYLLKPVR+EELKN WQHVIRRKK P+DQN SP + + K
Sbjct: 118 DYLLKPVRLEELKNIWQHVIRRKKWYPQDQNGSPDQDKGGDGAGEGEQVTSTGSADQNGK 177
Query: 160 SYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPK 219
RKRKDQ ++E+E +DG++NE S QKKPRVVW+ ELH KF+ AVN LGLDKAVPK
Sbjct: 178 VNRKRKDQ--DEEEEGEGEDGNDNEESGNQKKPRVVWSVELHQKFVSAVNQLGLDKAVPK 235
Query: 220 KILDLMNVEGLTRENVASHLQKFRLSLKRLG-NKTLEAGMVASVGSKDSSYLRIGALDGF 278
KILDLMNV+GLTRENVASHLQKFRL LKRL + MVA+ G+KDSSYLR+G+LDGF
Sbjct: 236 KILDLMNVDGLTRENVASHLQKFRLYLKRLSCGANQQPNMVAAFGAKDSSYLRMGSLDGF 295
Query: 279 GGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFN 338
G SV+ PG+LS+++L SSY PGS++GRLNS GL++ GIAS G+++PG S+S N N
Sbjct: 296 GDFRSVHGPGQLSTTSL-SSYPPGSLLGRLNSPGGLTLQGIASPGLLQPGHSRSLNNPLN 354
Query: 339 TIGKNQQAMFPANRNS-NLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFI 397
T+GK Q + NR S NL QG+ ++L+P Q Q +S H GDFNH T+FT A F
Sbjct: 355 TLGKLQPGLLQTNRGSTNLFQGISSALDPKQF-QLKSMNHSGDFNHKGDATSFTLAGCFP 413
Query: 398 DARVAVGSSSSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSS 457
D +V +GS +++S++ +N ML NP Q Q+R + QSSL++ SLNQ FD+GV SS
Sbjct: 414 DVKVTIGSLGNTISSAANNPQMLHVNPQQNQTRRSLATQSSLSMPSLNQESFDVGVRGSS 473
Query: 458 NFLDHGRCQESWQDAVQLSKSSSISLPLGEPFILDQVPPN--KDNILSSNCY-----LDI 510
NFLDH RC ++WQ VQ+S S SLPLGEPF D +P + +DNI S+ + LD
Sbjct: 474 NFLDHSRCDDNWQGVVQMSTFPSNSLPLGEPFRHDPLPTSTRRDNISSTTSHIVNNPLDF 533
Query: 511 SSSIANSTHLENSRGDL 527
SSS + + LE+SR D+
Sbjct: 534 SSSGSLTAPLEDSRLDM 550
>gi|255565035|ref|XP_002523510.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223537217|gb|EEF38849.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 676
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 309/543 (56%), Positives = 384/543 (70%), Gaps = 55/543 (10%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
MT E+K SS D KFP+GMRVLAVDDD CLK+L+ L++CQY+VT TN+AI AL
Sbjct: 1 MTVEDKRSSSED------KFPVGMRVLAVDDDPICLKVLDTLLKKCQYQVTTTNQAIQAL 54
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
KMLRENRN +DLVISDV MPDMDGFKLLELVGLEMDLPV+MLSA+SD +LV KG+ HGA
Sbjct: 55 KMLRENRNKYDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDKELVYKGVTHGAV 114
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFE---------------------- 158
DYLLKPVR+EELKN WQHVIRRKK+ PKDQ+RS ++ +
Sbjct: 115 DYLLKPVRIEELKNIWQHVIRRKKLQPKDQSRSQNQDKPLDGAGEGGQGMSSSGSEDQNG 174
Query: 159 KSYRKRKDQDG----------EDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAV 208
K RKRKDQD D DE G QKKPRVVW+ ELH KF+ AV
Sbjct: 175 KVNRKRKDQDEDEEEEGEDNLNDTDEPG-----------AQKKPRVVWSVELHRKFVAAV 223
Query: 209 NLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDS 267
N LGLDKAVPKKILDLMNVEGLTRENVASHLQK+RL LKR+ + + +A MVA+ G KDS
Sbjct: 224 NQLGLDKAVPKKILDLMNVEGLTRENVASHLQKYRLYLKRISSTASQQANMVAAFGIKDS 283
Query: 268 SYLRIGALDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKP 327
SYLR+ +LDGFG +++ PGRLSS+++ SSY P M+GRLNS +GL++ GIASSG+++P
Sbjct: 284 SYLRMASLDGFGEFRTLSGPGRLSSTSI-SSYHPSGMLGRLNSPSGLTLRGIASSGLLQP 342
Query: 328 GLSQSFNTSFNTIGKNQQAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSP 387
G SQS ++S NT+GK Q + +++ NL QG+ +SLEPNQ+ QS+S+ H G+FN +
Sbjct: 343 GQSQSLSSSVNTLGKLQPTLLHSSQGVNLFQGIPSSLEPNQL-QSKSSAHFGEFNRNDDS 401
Query: 388 TAFTAATGFIDARVAVGSSSSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQA 447
+ F+ F DARV +GS S++ + SN MMLQA+P Q Q+ + QSSL+V SLNQ
Sbjct: 402 SGFSLTNSFSDARVTIGSLSNTATGPSSNPMMLQAHPQQNQNTGVFATQSSLSVPSLNQE 461
Query: 448 YFDLGVHDSSNFLDHGRCQESWQDAVQLSKSSSISLPLGEPFILDQVPPN--KDNILSSN 505
FD+GV SSNFLDH RC ESWQ AVQLSK S+ +LPL EPF D + + +DN+ S+N
Sbjct: 462 SFDVGVRGSSNFLDHSRCNESWQGAVQLSKFST-TLPLSEPFSHDALSTSNFRDNMSSTN 520
Query: 506 CYL 508
+
Sbjct: 521 SRM 523
>gi|356556600|ref|XP_003546612.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 697
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 290/544 (53%), Positives = 376/544 (69%), Gaps = 37/544 (6%)
Query: 13 EDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDL 72
ED D+FP+GMRVLAVDDD CLK+LE LR+CQY VT TN+A+ ALKMLRENRN FDL
Sbjct: 8 EDEGCDRFPVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALKMLRENRNKFDL 67
Query: 73 VISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEEL 132
VISDV MPD+DGFKLLELVGLEMDLPV+MLSA+ DTKLVMKG+ HGACDYLLKPVR+EEL
Sbjct: 68 VISDVNMPDIDGFKLLELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEEL 127
Query: 133 KNTWQHVIRRKKVDPKDQNRSPHEFEKSY-----------------------RKRKDQDG 169
KN WQHV+RRK D +DQN++ +E EK+ +KRKDQ
Sbjct: 128 KNIWQHVVRRKNFDSRDQNKASNE-EKAPNIAGEGSQGLRSENSADQNKRLGKKRKDQSE 186
Query: 170 EDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEG 229
E+E++ ++ ++E+ + QKKPRVVW+ ELH KF+ AVN LGLDKAVPKKILDLMNVEG
Sbjct: 187 EEEED--GEENGDDEDPSAQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKKILDLMNVEG 244
Query: 230 LTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGR 289
LTRENVASHLQK+RL LK+ +A MVA++G D SYLR+G++DG+G + + GR
Sbjct: 245 LTRENVASHLQKYRLYLKKAAQ---QANMVAALGGSD-SYLRMGSIDGYGDFCTSSGSGR 300
Query: 290 LSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFP 349
++++ S SY + RLNS A L+M I+SS +I+P SQ+ N S NT+G Q ++FP
Sbjct: 301 ITNTT-SPSYASTGIFSRLNSPAALNMRAISSSALIRPVQSQNINCSLNTLGNIQPSVFP 359
Query: 350 ANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAVGSSSSS 409
AN +S+L+QG+ TS+E NQ QS TT I + ++S + F A+GF D+R V ++S
Sbjct: 360 ANHSSSLLQGIPTSIELNQSKQSNCTTGISQLSQVDS-SGFAVASGFPDSRATVNGPNNS 418
Query: 410 VSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRCQESW 469
+ +N +MLQ NP Q A+ NQSS+ ASL FD G+ SSN LD+ RC E+W
Sbjct: 419 LPCVSNNHIMLQGNPQQMHGPGAFRNQSSVRAASLCAESFDAGLCSSSNLLDYNRCNENW 478
Query: 470 QDAVQLSKSSSISLPLGEPFILDQVPPNKDNILSS-----NCYLDISSSIANSTHLENSR 524
Q+A QLSK + SLPL E F DQ+PP + N+ +S N +D SS + S LE++R
Sbjct: 479 QNAAQLSKFPAHSLPLCEAFSNDQLPPTRINVSNSRTHIVNSPVDFSSRMGISVPLEDTR 538
Query: 525 GDLS 528
+L+
Sbjct: 539 NELA 542
>gi|356530639|ref|XP_003533888.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 676
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 290/544 (53%), Positives = 374/544 (68%), Gaps = 39/544 (7%)
Query: 13 EDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDL 72
EDG D+FP+GMRVLAVDDD CLK+LE LR+CQY VT TN+A+ AL MLRENRN FDL
Sbjct: 8 EDGGCDRFPVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTMLRENRNKFDL 67
Query: 73 VISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEEL 132
VISDV MPD+DGFKLLELVGLEMDLPV+MLSA+ DTKLVMKG+ HGACDYLLKPVR+EEL
Sbjct: 68 VISDVNMPDIDGFKLLELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEEL 127
Query: 133 KNTWQHVIRRKKVDPKDQNRSPHEFEKSY-----------------------RKRKDQDG 169
KN WQHV+RRK D +DQN++ +E EK+ +KRKDQ
Sbjct: 128 KNIWQHVVRRKNFDSRDQNKASNE-EKAPNFAGGGSQGLRSENSADQNKRLGKKRKDQSD 186
Query: 170 EDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEG 229
E+E+ ++ ++E+ + QKK RVVW+ ELH KF+ AVN LGLDKAVPKKILDLMNVEG
Sbjct: 187 EEEEG--GEENEDDEDPSAQKKARVVWSVELHRKFVAAVNQLGLDKAVPKKILDLMNVEG 244
Query: 230 LTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGR 289
LTRENVASHLQK+RL LK+ +A MVA++G D SYLRIG++DG+G + + GR
Sbjct: 245 LTRENVASHLQKYRLYLKKAAQ---QANMVAALGGSD-SYLRIGSIDGYGDFCTSSGSGR 300
Query: 290 LSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFP 349
++++ L SY + RLNS A L+M GI+SS +I+P SQ+ N+S NT+G Q ++FP
Sbjct: 301 ITNATL-PSYASTGIFSRLNSPAALNMRGISSSALIRPVQSQNINSSLNTLGNIQPSIFP 359
Query: 350 ANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAVGSSSSS 409
AN++S+L+QG+ TS+E NQ Q TT I + ++S + FT A+GF D R V ++S
Sbjct: 360 ANQSSSLLQGIPTSIELNQSKQRNCTTGISQLSQVDS-SGFTVASGFPDHRATVNGPNNS 418
Query: 410 VSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRCQESW 469
+ +N +MLQ NP Q A+ NQSS+ ASL FD+G+ SSN LDH RC ++W
Sbjct: 419 LPCVSNNHIMLQGNP-QTHGPGAFSNQSSVRAASLCAESFDVGLCGSSNLLDHNRCNDNW 477
Query: 470 QDAVQLSKSSSISLPLGEPFILDQVPP------NKDNILSSNCYLDISSSIANSTHLENS 523
Q+A QLSK + SLPL E F DQ+PP N + +N +D SS + S LE++
Sbjct: 478 QNAAQLSKFPANSLPLCEAFSNDQLPPTSINDSNSSTHIGNNSPVDFSSRMGISVPLEDT 537
Query: 524 RGDL 527
R +L
Sbjct: 538 RNEL 541
>gi|297735895|emb|CBI18671.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 283/536 (52%), Positives = 358/536 (66%), Gaps = 74/536 (13%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
MT EE+ G + EDGV D FP+GMRVLAVDDD TCL +L+ LR CQY+VT TN+AITAL
Sbjct: 1 MTVEERKGGLAGEDGVKDPFPVGMRVLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITAL 60
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
KMLREN+NNFDLVISDV MPDMDGFKLLELVGLEMDLPV+MLS++SD KLVM+GI HGAC
Sbjct: 61 KMLRENKNNFDLVISDVSMPDMDGFKLLELVGLEMDLPVIMLSSHSDPKLVMRGITHGAC 120
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDG 180
DYLLKPVR+EELKN WQHVIRRKK+D KDQN+S D+D DG
Sbjct: 121 DYLLKPVRIEELKNIWQHVIRRKKIDSKDQNKS----------------ADQDNALHADG 164
Query: 181 HENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
ENE+ ++QKKPRVVW+ ELH KF+ AVN LG++KAVPK+ILDLMNVEGLTRENVASHLQ
Sbjct: 165 EENEDPSSQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKRILDLMNVEGLTRENVASHLQ 224
Query: 241 KFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSY 299
K+RL LKR+ T +A MVA+ G+KDSSY+R+G+LDGFG +
Sbjct: 225 KYRLYLKRISCVATQQANMVAAFGAKDSSYMRMGSLDGFGHAQ----------------- 267
Query: 300 VPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRNSNLVQG 359
NSS ++ HG K Q + P N++++L QG
Sbjct: 268 ---------NSSNSVNTHG-----------------------KLQPVVLPTNQSASLFQG 295
Query: 360 VQTSLEPNQMPQSES-TTHIGDFNHINSPTAFTAATGFIDARVAVGSSSSSVSTSLSNLM 418
+ TSLE +Q+ Q + +T G+F+ +++ T FT A GF D+R+ V SSS+S+S + SN +
Sbjct: 296 IPTSLELDQLQQRKCISTQRGEFSSVDNTTVFTTANGFPDSRMTVHSSSNSLSNAPSNPL 355
Query: 419 MLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRCQESWQDAVQLSKS 478
MLQ+NP Q R NQSSL +LN + +GV SSNFLDHGRC E+WQ A+QLSK
Sbjct: 356 MLQSNPQQTLCRGGLANQSSLKAVTLNPEPYTMGVSGSSNFLDHGRCNENWQSALQLSKF 415
Query: 479 SSISLPLGEPFILDQVPPN--KDNILSSNCY-----LDISSSIANSTHLENSRGDL 527
S SLPL EP D + N +++I S+ + +D S++ + LE+SRG++
Sbjct: 416 PSNSLPLSEPLNCDPLTTNNLREHISSTGSHIRRSPIDFSATSVLAGPLEDSRGEM 471
>gi|449457923|ref|XP_004146697.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449505373|ref|XP_004162449.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 697
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 297/553 (53%), Positives = 377/553 (68%), Gaps = 43/553 (7%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
MT E + +DG D FP+GMRVLAVDDD CLK+LE LR+CQY VT T ++I AL
Sbjct: 1 MTVEGHSVAVVGDDGATDHFPVGMRVLAVDDDPICLKVLESLLRKCQYHVTTTKQSIEAL 60
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+MLRENRN FDLVISDV MPDMDGFKLLELVGLEMDLPV+MLSA+SDT+LVMKGI HGAC
Sbjct: 61 RMLRENRNKFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTELVMKGIAHGAC 120
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSP---------HEFEKSY---------- 161
DYLLKPVR+EELKN WQHVIRRKK++PK +N+ P +E E+ +
Sbjct: 121 DYLLKPVRIEELKNIWQHVIRRKKLEPKAKNKFPSQNKVQNGGNEVEQGFSPTSNADSAK 180
Query: 162 --RKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPK 219
RKRKDQD +D+DE G ++G ++++ + QKKPRVVW+ ELH KF+ AVN LGL+KAVPK
Sbjct: 181 FNRKRKDQDDDDDDE-GKENGLDSDDPSNQKKPRVVWSVELHRKFVSAVNQLGLEKAVPK 239
Query: 220 KILDLMNVEGLTRENVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGF 278
KILDLMNVEGLTRENVASHLQK+RL LKR+ N + +A MVA+ GSKD +Y+R+G+LDG+
Sbjct: 240 KILDLMNVEGLTRENVASHLQKYRLYLKRISNVASQQANMVATFGSKDGTYMRMGSLDGY 299
Query: 279 GGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFN 338
G H GRL +S+L SSY P M+GRLNS AG+S+ GI SSG+I+ SQ+ N + N
Sbjct: 300 GDLHGFAGSGRLPNSSL-SSYSPVGMLGRLNSPAGMSLRGITSSGLIQQN-SQNLNCAIN 357
Query: 339 TIGKNQ-QAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFI 397
+GK Q M N+ +NL+QG+ TSLE Q+ S+STT IGDFN +N + F F
Sbjct: 358 NLGKLQPTTMLSPNQTTNLLQGIPTSLEIGQLQHSKSTTSIGDFNTMNDTSGFGVPNSFP 417
Query: 398 DARVAVGSSSSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSS 457
+ R +G+S+ SVS + +MLQ + YGNQ+SL V LN FD+ V S
Sbjct: 418 ETRANIGNSTYSVSPA---PLMLQG------TIPTYGNQTSLRVDPLNGETFDIDV-GGS 467
Query: 458 NFLDHGRCQESWQDAVQLSKSSSISLPLGEPFILDQVPPNKDNILSS------NCYLDIS 511
NFLD +WQ A LS+ S+ SL E + DQ+ + ++++SS N +D S
Sbjct: 468 NFLDPDPSNGNWQGAAHLSRFSATSLTTNEAYPSDQL-HSMNSVISSTPSTIGNISVDFS 526
Query: 512 SSIANSTHLENSR 524
S A S L +SR
Sbjct: 527 SRSAGSASLLDSR 539
>gi|255548782|ref|XP_002515447.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223545391|gb|EEF46896.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 663
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 292/548 (53%), Positives = 360/548 (65%), Gaps = 40/548 (7%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
MT E+ G + D+ FPIGMRVLAVDDD TCL +LE FLR CQY VT T++AI+AL
Sbjct: 1 MTVEQGAGEAKDQ------FPIGMRVLAVDDDPTCLLVLETFLRRCQYHVTTTSQAISAL 54
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
KMLREN+N FDLVISDV+MPDMDGFKLLELVGLEMDLPV+MLSAYSD KLVMKGI HGAC
Sbjct: 55 KMLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSAYSDPKLVMKGITHGAC 114
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------RSPHEF---EKSYRKRKDQD 168
DYLLKPVR+EELKN WQHVIRRKKVD KDQN R E +K +KRKDQ+
Sbjct: 115 DYLLKPVRIEELKNIWQHVIRRKKVDNKDQNNFDNQDKLPRGSGEATADQKLNKKRKDQN 174
Query: 169 GEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVE 228
EDEDED D+ GHENE+ TTQKKPRVVW+ ELH KF+ AVN LG+DKAVPKKILDLMNVE
Sbjct: 175 -EDEDEDRDEHGHENEDPTTQKKPRVVWSVELHRKFVAAVNQLGVDKAVPKKILDLMNVE 233
Query: 229 GLTRENVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSP 287
LTRENVASHLQK+RL LKR+ +A MVA++GS D+SYL++G+ GF G +
Sbjct: 234 KLTRENVASHLQKYRLYLKRISTVANQQANMVAALGSSDASYLQMGSGLGFQG---IAGA 290
Query: 288 GRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAM 347
G+ ++ P M+GRLNS AGL M G+ S G+I+ G Q S N Q A+
Sbjct: 291 GQFHNATF-RPLPPSGMLGRLNSPAGLGMRGLPSPGVIQLGQLQGTGHSSNNQSHFQMAV 349
Query: 348 FPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDF-NHINSPTAFTAATGFIDARVAVGSS 406
P N N++QG+ TSLE +Q+ ++ T+I + IN TAF+ + GF D ++ VGSS
Sbjct: 350 HPGNA-GNVLQGMPTSLELDQIQSNKGVTYIRELPTDINDATAFSVSGGFSDTKIMVGSS 408
Query: 407 SSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRCQ 466
+SS + + +ML+ N AQ +G SSLTVASL+ + SS+ D GRC
Sbjct: 409 NSSFLGASNKPLMLEGNTQGAQDGKEFGKHSSLTVASLDSGF-------SSHLPDPGRCN 461
Query: 467 ESWQDAVQLSKSSSISLPLGEPFILDQVPPNKD-------NILSSNCYLDISSSIANSTH 519
++W AVQ + S S L + F + PN + + N DISS H
Sbjct: 462 DNWSSAVQSNGVQSTSFALNDCFRQTTLHPNNSRDSMSTMGLQNGNNAPDISSISTLPIH 521
Query: 520 LENSRGDL 527
L+ S+ DL
Sbjct: 522 LQESKADL 529
>gi|224088246|ref|XP_002308388.1| predicted protein [Populus trichocarpa]
gi|222854364|gb|EEE91911.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 257/487 (52%), Positives = 322/487 (66%), Gaps = 84/487 (17%)
Query: 4 EEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKML 63
+++GG+S +E KFP+GMR+LAVDDD CLK+LE LR+CQYEVT TN+A+TAL+ML
Sbjct: 5 DQRGGNSVNEK----KFPVGMRILAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEML 60
Query: 64 RENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYL 123
RENRN +DLVISDV MPDMDGFKLLELVGLEMDLPV+MLS++ D + V KG+ HGA DYL
Sbjct: 61 RENRNKYDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSSHGDKEFVYKGVTHGAVDYL 120
Query: 124 LKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDG------- 176
LKPVRMEELKN WQHVIRRKK P+DQNRSP++ K DG E E G
Sbjct: 121 LKPVRMEELKNIWQHVIRRKKWYPEDQNRSPNQ-------DKGDDGAGEGEQGVTSTGSA 173
Query: 177 DDDGHENEN--------------------STTQKKPRVVWTTELHTKFIGAVNLLGLDKA 216
D +G N S QKKPRVVW+ +LH KF+ AVN +GLDKA
Sbjct: 174 DQNGKLNRKRKDQDDEDEEEGEDGDDNEVSGNQKKPRVVWSVDLHQKFVAAVNQMGLDKA 233
Query: 217 VPKKILDLMNVEGLTRENVASHLQKFRLSLKRL---GNKTLEAGMVASVGSKDSSYLRIG 273
VPKKILDLMNV+GLTRENVASHLQKFRL LKRL GN+ + MV++ G+KDSSYL++
Sbjct: 234 VPKKILDLMNVDGLTRENVASHLQKFRLYLKRLSSGGNQ--QGNMVSAFGAKDSSYLQMS 291
Query: 274 ALDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSF 333
++DGFG S++ PGRLS+++L SSY G+ +GRLNS GL++ GIASSG+ +PGL
Sbjct: 292 SVDGFGDFRSMHGPGRLSTTSL-SSYPSGTFLGRLNSPGGLTLQGIASSGLHQPGL---- 346
Query: 334 NTSFNTIGKNQQAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAA 393
P N+ +NL QG+ ++LEP Q+ Q +S HIG+FN FT A
Sbjct: 347 --------------LPTNQGTNLFQGISSALEPKQL-QMKSINHIGEFNQKGDTAGFTLA 391
Query: 394 TGFIDARVAVGSSSSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGV 453
+ F D +V +GS S+++S + QSSL++ SLNQ FD+GV
Sbjct: 392 SCFPDVKVTIGSLSNTISGA---------------------TQSSLSMPSLNQESFDVGV 430
Query: 454 HDSSNFL 460
SSNFL
Sbjct: 431 QGSSNFL 437
>gi|225430376|ref|XP_002282928.1| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 693
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 263/541 (48%), Positives = 350/541 (64%), Gaps = 46/541 (8%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FPIGMRVLAVDDD TCL++L+ LR CQY VT T++AITALKMLREN+N FDLVISDV
Sbjct: 12 DQFPIGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDV 71
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+MPDMDGFKLLELVGLEMDLPV+MLSA D KLVMKGI HGACDYLLKPVR+E+LKN WQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQ 131
Query: 138 HVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDD------------------ 179
HVIRR++ DP+DQN S + R+ + G+ E G+ D
Sbjct: 132 HVIRRRRFDPRDQNNSD---SRDKRQGPGEGGQGSSEPGNPDHGKLNKKRKDQNEDDDEE 188
Query: 180 ----GHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENV 235
GH+NE+ ++QKKPRVVW+ ELH KF+ AVN LG+D+AVPKKILDLMNVE LTRENV
Sbjct: 189 NDENGHDNEDPSSQKKPRVVWSVELHRKFVAAVNQLGIDRAVPKKILDLMNVEKLTRENV 248
Query: 236 ASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSA 294
ASHLQK+RL LKR+ +A MVA++GS DS+YL +L+G G ++++ G+L +S
Sbjct: 249 ASHLQKYRLYLKRISCVANQQANMVAALGSTDSTYLH--SLNGLGNFYNLSGSGQLPNST 306
Query: 295 LSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRNS 354
S+ P M+GRLN+ +G+ MH ++SS M++ G Q+ + N+ GK Q + P N+N
Sbjct: 307 F-RSFPPSGMLGRLNTPSGMGMHCLSSSEMVQLGHLQNSSNPINSGGKFQPVLLPGNQNG 365
Query: 355 NLVQGVQTSLEPNQMPQSESTTHIGDFN-HINSPTAFTAATGFIDARVAVGSSSSSVSTS 413
++QG+ SLE Q+ ++ +G+ + I T F A++GF D ++ SSSS+ +
Sbjct: 366 IILQGMPMSLELEQLQHNKGIIRVGELSTTIGDSTVFPASSGFPDTKMTSSRSSSSLLVA 425
Query: 414 LSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRCQESWQDAV 473
++ +MLQ + + Q R NQ+S T+ L S+F DHGRC ++W AV
Sbjct: 426 ANSPLMLQGHSQENQRRGGLRNQNSATL---------LNAELPSSFPDHGRCNDNWSTAV 476
Query: 474 QLSKSSSISLPLGEPFILDQVPPN--KDNI----LSSNCYL-DISSSIANSTHLENSRGD 526
Q S S S PL + F + P+ +DNI L S L D+S + L +SR D
Sbjct: 477 QPSAIQSSSFPLSDCFKQATLHPSNLRDNISSVTLQSGTNLRDVSCVTSMPPPLPDSRTD 536
Query: 527 L 527
L
Sbjct: 537 L 537
>gi|147863919|emb|CAN81109.1| hypothetical protein VITISV_010435 [Vitis vinifera]
Length = 693
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 262/541 (48%), Positives = 349/541 (64%), Gaps = 46/541 (8%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FPIGMRVLAVDDD TCL++L+ LR CQY VT T++AITALKMLREN+N FDLVISDV
Sbjct: 12 DQFPIGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDV 71
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+MPDMDGFKLLELVGLEMDLPV+MLSA D KLVMKGI HGACDYLLKPVR+E+LKN WQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQ 131
Query: 138 HVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDD------------------ 179
HVIRR++ DP+DQN S + R+ + G+ E G+ D
Sbjct: 132 HVIRRRRFDPRDQNNSD---SRDKRQGPGEGGQGSSEPGNPDHGKLNKKRKDQNEDDDEE 188
Query: 180 ----GHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENV 235
GH+NE+ ++QKKPRVVW+ ELH KF+ AVN LG+D+AVPKKILDLMNVE LTRENV
Sbjct: 189 NDENGHDNEDPSSQKKPRVVWSVELHRKFVAAVNQLGIDRAVPKKILDLMNVEKLTRENV 248
Query: 236 ASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSA 294
ASHLQK+RL LKR+ +A MVA++GS DS+YL +L+G G ++++ G+L +S
Sbjct: 249 ASHLQKYRLYLKRISCVANQQANMVAALGSTDSTYLH--SLNGLGNFYNLSGSGQLPNST 306
Query: 295 LSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRNS 354
S+ P M+GRLN+ +G+ MH ++SS M++ G Q+ + N+ GK Q + P N+N
Sbjct: 307 F-RSFPPSGMLGRLNTPSGMGMHCLSSSEMVQLGHLQNSSNPINSGGKFQPVLLPGNQNG 365
Query: 355 NLVQGVQTSLEPNQMPQSESTTHIGDFN-HINSPTAFTAATGFIDARVAVGSSSSSVSTS 413
++QG+ SLE Q+ ++ +G+ + I T F A++GF D ++ SSSS+ +
Sbjct: 366 IILQGMPMSLELEQLQHNKGIIRVGELSTTIGDSTVFPASSGFPDTKMTSSRSSSSLLVA 425
Query: 414 LSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRCQESWQDAV 473
++ +MLQ + + Q R NQ+S T+ L S+F DHGRC ++W AV
Sbjct: 426 ANSPLMLQGHSQENQRRGGLRNQNSATL---------LNAELPSSFPDHGRCNDNWSTAV 476
Query: 474 QLSKSSSISLPLGEPFILDQVPPN--KDNI----LSSNCYL-DISSSIANSTHLENSRGD 526
Q S S S L + F + P+ +DNI L S L D+S + L +SR D
Sbjct: 477 QPSAIQSSSFLLSDCFKQATLHPSNLRDNISSVTLQSGTNLRDVSCVTSMPPPLPDSRTD 536
Query: 527 L 527
L
Sbjct: 537 L 537
>gi|356554201|ref|XP_003545437.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Glycine max]
Length = 681
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/494 (49%), Positives = 323/494 (65%), Gaps = 41/494 (8%)
Query: 14 DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLV 73
D + D+FPIGMRVLAVDDD TCL +LE LR CQY VT T AITALK+LREN+ FDLV
Sbjct: 10 DDLRDQFPIGMRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALKLLRENKTMFDLV 69
Query: 74 ISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELK 133
ISDV+MPDMDGFKLLELVGLEMDLPV+MLS D K+VMKGI HGACDYLLKPVR+EEL+
Sbjct: 70 ISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQ 129
Query: 134 NTWQHVIRRKKVDPKDQNRS-----PHEFEKSYR-----KRKDQDGEDEDE--------- 174
N WQHVIRRKK+D K++N++ P+ + R DQ+G+ +
Sbjct: 130 NIWQHVIRRKKIDSKERNKTSDHDKPNADNGNGRVSAGTGNSDQNGKPSKKRKDQDEDDE 189
Query: 175 DGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTREN 234
+ ++DGH+NE+S+T KKPRVVW+ ELH KF+ AVN LG+DKAVPKKILDLMNVE LTREN
Sbjct: 190 EENEDGHDNEDSSTLKKPRVVWSVELHRKFVSAVNQLGIDKAVPKKILDLMNVEKLTREN 249
Query: 235 VASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSS 293
VASHLQK+RL LKR+ +A +VA++G+ DSSYLR+G+L G G ++ P + ++
Sbjct: 250 VASHLQKYRLYLKRISCVANRQANLVAALGTADSSYLRMGSLSGVGHMQTLTGPQQFHNN 309
Query: 294 ALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRN 353
A + PG MIGRLN+S GL+MHGI+SS ++ +Q+ N S N K Q A+ N+N
Sbjct: 310 AF-RPFPPGGMIGRLNASVGLNMHGISSSEALQLSHAQNLNKSINDPLKFQSAIACGNQN 368
Query: 354 SNLVQGVQTSLEPNQMPQSESTTHIGDFNHINS-----PTAFTAATGFID--ARVAVGSS 406
+QG+ S+ +Q+ ++ + +G +++S PT F + D +V +G S
Sbjct: 369 G--IQGMPMSIGLDQLQHNKGVS-VGPIQNMSSLIDDRPT-FGVSKKLSDQTQKVTIGCS 424
Query: 407 SSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRCQ 466
S V +N ++L+A+ Q Y N LT + + F L + LDHGRC
Sbjct: 425 PSPVLDISNNDLVLKADSENTQGGGVYEN---LTSVASQHSQFSLPL------LDHGRCS 475
Query: 467 ESWQDAVQLSKSSS 480
+ W +Q S ++S
Sbjct: 476 DIWSSPMQSSGTNS 489
>gi|449443269|ref|XP_004139402.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449494037|ref|XP_004159429.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 699
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 254/534 (47%), Positives = 336/534 (62%), Gaps = 43/534 (8%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
MT E + + E+ +++FPIGMRVLAVDDD CLK+LE LR+CQY VT TN+A+ AL
Sbjct: 1 MTVEVRKTNLVGENDDMEQFPIGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVQAL 60
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
KMLREN+N FDLVISDV MPDMDGFKLLELVGLEMDLPV+MLSA+S+T+LV KG+ HGAC
Sbjct: 61 KMLRENKNRFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSNTELVKKGVLHGAC 120
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRS--------------------PHEFEKS 160
DYLLKPVR+EELKN WQHV+RRKK K+QN+S + EKS
Sbjct: 121 DYLLKPVRIEELKNIWQHVLRRKKPSVKNQNKSIIGNNTSQSVEVAKGCPPAVSTDNEKS 180
Query: 161 YRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWT---TELHTKFIGAVNLLGLDKAV 217
+++KDQD ++E + D +EN++S+TQKKPRV W LH KF+ AVN+LG +KAV
Sbjct: 181 GKRQKDQDDDEEGGEEDST-YENDDSSTQKKPRVNWYDGDENLHRKFVAAVNILGYEKAV 239
Query: 218 PKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLE-AGMVASVGSKDSSYLRIGALD 276
PKKILDLMNVEGLTRENVASHLQK+R LK+L ++ E + + G +S+ + +LD
Sbjct: 240 PKKILDLMNVEGLTRENVASHLQKYRQYLKKLCSEESEQCNKMGAFGGTHTSFRPMASLD 299
Query: 277 GFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTS 336
GF S+ GRLS++ S Y ++G+LNS+AGLS++ IASSGMI+ S + S
Sbjct: 300 GF----SMTGTGRLSNATF-SQYPSREIVGQLNSTAGLSLNDIASSGMIQ---SHKLSNS 351
Query: 337 FNTIGKNQQAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGF 396
+ IGK F N+ + G+ SL+ Q+ + + T + N IN ++FT +T F
Sbjct: 352 LSFIGKPHPPFFHTNQPPHTFNGISMSLDHIQLHRDKRTLSFKESNLINDASSFTVSTSF 411
Query: 397 IDARVAVGSSSSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDS 456
DA AVGSSS+ S+ +ML+ + Q +G QSSL + N+ D G
Sbjct: 412 PDAGRAVGSSSNYDFGVSSHSLMLREHKQQIHGDGEFGGQSSLKITLDNREPLDSGT-SV 470
Query: 457 SNFLDHGRCQESWQDAVQLSKSSS------ISLPLGEP---FILDQVPPNKDNI 501
SN L H + ++W ++QL K SS I P G P + P+ DN
Sbjct: 471 SNILGHSQSNKNWPGSIQLPKFSSNVSVTGIYPPDGMPGTYLTISSAQPDNDNF 524
>gi|449455539|ref|XP_004145510.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 688
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 261/542 (48%), Positives = 338/542 (62%), Gaps = 49/542 (9%)
Query: 14 DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLV 73
D +D+FP GMRVLAVDDD TCL ILE LR CQY VT TN+A+ ALK+LREN+N FD+V
Sbjct: 8 DDPVDQFPTGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLLRENKNKFDVV 67
Query: 74 ISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELK 133
ISDV+MPDMDGFKLLELVGLEMDLPV+MLSA D KLVMKGI HGACDYLLKPVR+EELK
Sbjct: 68 ISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELK 127
Query: 134 NTWQHVIRRKKVDPKDQNRSPHEFE--------------KSYRKRKDQD-GEDEDEDGDD 178
N WQHVIRRKK DPKD+ S ++ K +KRKDQ+ ED+D+D
Sbjct: 128 NIWQHVIRRKKFDPKDRMNSGNQDRPDSENGEESADPNGKFNKKRKDQNYNEDDDQDY-- 185
Query: 179 DGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASH 238
G +N++S+TQKKPRVVW+ ELH KF+ AVN LG+DKAVPKKILDLMNVE LTRENVASH
Sbjct: 186 -GQDNDDSSTQKKPRVVWSVELHRKFVNAVNQLGIDKAVPKKILDLMNVEKLTRENVASH 244
Query: 239 LQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSS 297
LQK+RL LKR+ +A MV ++ S D SYLRIG+L G G HS+ P + +++ S
Sbjct: 245 LQKYRLYLKRISCVANQQANMVTALSSADPSYLRIGSLGGIGNFHSLTGPPQFPNTSYRS 304
Query: 298 SYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRNSNLV 357
G M GRLNS A + MHG++S G ++ G + + S N Q + NR+ N+
Sbjct: 305 IPTTG-MFGRLNSPACMGMHGLSSPGTVQLG---NLSNSSNDQSTFQPIVLSGNRSGNIF 360
Query: 358 QGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAVGSSSSSVSTSLSN- 416
+G+ E +Q+ + TH+ + + +AF T F + G+ SSS +LSN
Sbjct: 361 RGMPEPSEIDQLQHVKHGTHVDNLS-----SAFDERTVFPSIGLPNGNMSSS---TLSNP 412
Query: 417 LMMLQANPH--QAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRCQ-ESWQDAV 473
L+ L +P +AQ + G + T +S++ + S LD+ RC ++W +AV
Sbjct: 413 LLGLTNDPSIPEAQHHEVNGGRKFGTQSSISVVSSNSDSPRPS--LDNVRCTGDNWSNAV 470
Query: 474 QLSKSSSISLPLGEPFILDQVPPN-----KDNILSS----NCYLDISSSIANSTHLENSR 524
S+ ++P L V + +DN S+ NC DISS + ST SR
Sbjct: 471 HSSRVHLNTIPSAN---LSNVATSYHGQLRDNTTSALHIGNCLSDISSITSLSTQSHESR 527
Query: 525 GD 526
D
Sbjct: 528 ID 529
>gi|449485185|ref|XP_004157093.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Cucumis sativus]
Length = 688
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 261/542 (48%), Positives = 338/542 (62%), Gaps = 49/542 (9%)
Query: 14 DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLV 73
D +D+FP GMRVLAVDDD TCL ILE LR CQY VT TN+A+ ALK+LREN+N FD+V
Sbjct: 8 DDPVDQFPTGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLLRENKNKFDVV 67
Query: 74 ISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELK 133
ISDV+MPDMDGFKLLELVGLEMDLPV+MLSA D KLVMKGI HGACDYLLKPVR+EELK
Sbjct: 68 ISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELK 127
Query: 134 NTWQHVIRRKKVDPKDQNRSPHEFE--------------KSYRKRKDQD-GEDEDEDGDD 178
N WQHVIRRKK DPKD+ S ++ K KRKDQ+ ED+D+D
Sbjct: 128 NIWQHVIRRKKFDPKDRMNSGNQDRPDSENGEESADPNGKFNXKRKDQNYNEDDDQDY-- 185
Query: 179 DGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASH 238
G +N++S+TQKKPRVVW+ ELH KF+ AVN LG+DKAVPKKILDLMNVE LTRENVASH
Sbjct: 186 -GQDNDDSSTQKKPRVVWSVELHRKFVNAVNQLGIDKAVPKKILDLMNVEKLTRENVASH 244
Query: 239 LQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSS 297
LQK+RL LKR+ +A MV ++ S D SYLRIG+L G G HS+ P + +++ S
Sbjct: 245 LQKYRLYLKRISCVANQQANMVTALSSADPSYLRIGSLGGIGNFHSLTGPPQFPNTSYRS 304
Query: 298 SYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRNSNLV 357
G M GRLNS A + MHG++S G ++ G + + S N Q + NR+ N+
Sbjct: 305 IPTTG-MFGRLNSPACMGMHGLSSPGTVQLG---NLSNSSNDQSTFQPIVLSGNRSGNIF 360
Query: 358 QGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAVGSSSSSVSTSLSN- 416
+G+ E +Q+ + TH+ + + +AF T F + G+ SS+ +LSN
Sbjct: 361 RGMPEPSEIDQLQHVKHGTHVDNLS-----SAFDERTVFPSIGLPNGNMSSN---TLSNP 412
Query: 417 LMMLQANPH--QAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRCQ-ESWQDAV 473
L+ L +P +AQ + G + T +S++ + S LD+ RC ++W +AV
Sbjct: 413 LLGLTNDPSIPEAQHHEVNGGRKFGTQSSISVVSSNSDSPRPS--LDNVRCTGDNWSNAV 470
Query: 474 QLSKSSSISLPLGEPFILDQVPPN-----KDNILSS----NCYLDISSSIANSTHLENSR 524
S+ ++P G L V + +DN S+ NC DISS + ST SR
Sbjct: 471 HSSRVHLNTIPSGN---LSNVATSYHGQLRDNTTSALHIGNCLSDISSITSLSTQSHESR 527
Query: 525 GD 526
D
Sbjct: 528 ID 529
>gi|356562101|ref|XP_003549312.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 667
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/495 (47%), Positives = 314/495 (63%), Gaps = 41/495 (8%)
Query: 14 DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLV 73
D + D+FPIGMRVLAVDDD TCL +LE LR CQY VT T AITAL +LREN+ FDLV
Sbjct: 10 DDLRDQFPIGMRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALNLLRENKTMFDLV 69
Query: 74 ISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELK 133
ISDV+MPDMDGFKLLELVGLEMDLPV+MLS D K+VMKGI HGACDYLLKPVR+EEL+
Sbjct: 70 ISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQ 129
Query: 134 NTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGH------------ 181
N WQHVIRRKK+D K+QN++ +++K+ + G + D +G
Sbjct: 130 NIWQHVIRRKKIDSKEQNKTS-DYDKTNSDSGNGRGSAATGNSDQNGKPSKKRKDQDEDD 188
Query: 182 --------ENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
+NE+ +TQKKPRVVW+ ELH KF+ AVNLLG+DKAVPKKILDLMN E LTRE
Sbjct: 189 DEENDTDHDNEDPSTQKKPRVVWSVELHRKFVSAVNLLGIDKAVPKKILDLMNDEKLTRE 248
Query: 234 NVASHLQKFRLSLKRLG-NKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSS 292
NVASHLQK+RL LKR+ +A MVA++G+ DSSYLR+G+L G G ++ P + +
Sbjct: 249 NVASHLQKYRLYLKRISCGANRQANMVAALGTADSSYLRMGSLSGVGHLQTLTGPQQFHN 308
Query: 293 SALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANR 352
+A + PG MIGRLN+S GL+ HG++SS ++ +Q+ N S N K Q ++ N+
Sbjct: 309 NAF-RPFPPGGMIGRLNTSVGLNNHGLSSSEALQLSHAQNLNNSINDPLKFQSSIACGNQ 367
Query: 353 NSNLVQGVQTSLEPNQMPQSES-TTHIGDFNH----INSPTAFTAATGFID--ARVAVGS 405
N+ +QG+ S+ +Q+ ++ + +G + I++ F + D +V +G
Sbjct: 368 NA--IQGMPMSIGLDQLQHNKGVSVSVGPIQNMSPLIDARPTFAVSNRLSDQIPKVTMGC 425
Query: 406 SSSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRC 465
S S V +N ++L+A+ Q R Y N LT + + F L L HGRC
Sbjct: 426 SPSPVLDVSNNALVLKADSENTQGRGVYEN---LTSVASQHSQFSLP------LLGHGRC 476
Query: 466 QESWQDAVQLSKSSS 480
+ W ++ S ++S
Sbjct: 477 SDIWSSPMRSSGTNS 491
>gi|356515054|ref|XP_003526216.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 696
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 245/529 (46%), Positives = 332/529 (62%), Gaps = 49/529 (9%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
MT E+K S DE FP+GMRVLAVDDD TCL +LE LR CQY T TN+AI AL
Sbjct: 1 MTVEKKMNDSGDE------FPVGMRVLAVDDDPTCLLVLETLLRRCQYHATTTNQAIKAL 54
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+LRE+++ FDLVISDV+MPDMDGFKLLELVGLEMDLPV+MLSA DTKLVMKGI+HGAC
Sbjct: 55 ALLREHKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDTKLVMKGISHGAC 114
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPH---------------------EFEK 159
DYLLKPVRMEELKN WQHVIRRKK D K++N++ + EK
Sbjct: 115 DYLLKPVRMEELKNIWQHVIRRKKFDSKEKNKTRNIDKPTSNSSNGLGSSGTGNSDHNEK 174
Query: 160 SYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPK 219
+KRKDQ ++++++ ++ H+N++ + QKKPRVVW+ ELH KF+ AVN LG+DKAVPK
Sbjct: 175 LTKKRKDQ--DEDEDEEQENDHDNDDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPK 232
Query: 220 KILDLMNVEGLTRENVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGF 278
KILDLMNVE LTRENVASHLQK+RL LKR+ + MV ++G D SYLR+ ++ G
Sbjct: 233 KILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQTNMVVALGGADPSYLRMNSVSGV 292
Query: 279 GGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFN 338
G S++ G+L ++A S+ P +I RLN+ AGL++HG SG+++ SQ+ + +
Sbjct: 293 GHIQSISGSGQLHNNAF-RSFPPSGIINRLNTPAGLNVHGFP-SGVLQLSQSQNLKNTND 350
Query: 339 TIGKNQQAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHI-NSPTAFTAATGFI 397
+ K Q A+ PAN+N V G+ S+ +Q+ ++ + + + ++ T F +
Sbjct: 351 NL-KFQSAIVPANQNG--VHGMTVSVGLDQLQNNKGVMSVQNLTTVFDAKTTFPISNKLP 407
Query: 398 DARVAV---GSSSSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVH 454
D R + GS + VS S +N +ML+ P G Q S+ + +L+ +
Sbjct: 408 DPRPKITNSGSHTPDVSFS-NNALMLEPRPQ--------GTQGSVRIETLSSSVASQHSE 458
Query: 455 DSSNFLDHGRCQESWQDAVQLSKSSSISLPLGEPFILDQVPPNKDNILS 503
S + LD GR ++W VQ S + S P E F +PP DN+ S
Sbjct: 459 FSLSLLDQGRYSDNWASTVQPSVIQTNSYPPSECFGQTNIPPT-DNMAS 506
>gi|357466055|ref|XP_003603312.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355492360|gb|AES73563.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 645
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 243/509 (47%), Positives = 317/509 (62%), Gaps = 47/509 (9%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FPIGMRVLAVDDD TCL +LE LR CQY VT T++AITAL MLREN++ FDLVISDV
Sbjct: 6 DRFPIGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTSQAITALTMLRENKDKFDLVISDV 65
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+MPDMDGFKLLELVGLEMDLPV+MLSAY DTKLVMKGI+HGACDYLLKPVR+EELKN WQ
Sbjct: 66 HMPDMDGFKLLELVGLEMDLPVIMLSAYGDTKLVMKGISHGACDYLLKPVRLEELKNIWQ 125
Query: 138 HVIRRKKVDPKDQNRSPHE---FEKSYRKRKDQDGEDEDEDGD----------------D 178
HVIR+KK DPK++N++ S + E+ DE+G +
Sbjct: 126 HVIRKKKSDPKEKNKTSKPDKTTSDSGSGLRSAGAENSDENGKLTKKRKDQDEDEDEDKE 185
Query: 179 DGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASH 238
+G++NE+ + QKKPRVVW+ ELH KF+ AVN LG+DKAVPKKILD+MNVE +TRENVASH
Sbjct: 186 NGNDNEDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDMMNVENITRENVASH 245
Query: 239 LQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSS 297
LQK+RL LKR+ +A MVA++GS D SYLR+G G H N+ R
Sbjct: 246 LQKYRLYLKRISCVANQQASMVAALGSADQSYLRMG-----GSGHFHNNAFR-------- 292
Query: 298 SYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRNSNLV 357
S+ P +IG LN+ L+ HG + SG+++ G S++ N S N K Q A+ P N+ N++
Sbjct: 293 SFSPSGIIGNLNTPTSLNGHGFSPSGLLQLGQSRNLNNSCNDQLKFQSAITPVNQ--NIL 350
Query: 358 QGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAVGSSSS---SVSTSL 414
QG+ S+ + + S+ + + N + T F F D R + +SSS S+ S
Sbjct: 351 QGMPMSIGFDHLQNSKGVISVQNLN-TDVKTTFPIPNKFPDQRPSFATSSSHPPSLGIS- 408
Query: 415 SNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRCQESWQDAVQ 474
+N +ML +P + G SS + + + F S + LD GR +W V
Sbjct: 409 NNGLMLDTHPERKHGGIGIGYGSSSSSVASQHSEF------SFSMLDQGRHGGNWSSDVP 462
Query: 475 LSKSSSISLPLGEPFILDQVPPNKDNILS 503
+S + S E F VPP+ DN+ S
Sbjct: 463 ISGIQTNSFSSSECFRQTAVPPS-DNMAS 490
>gi|296082079|emb|CBI21084.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 259/540 (47%), Positives = 338/540 (62%), Gaps = 70/540 (12%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FPIGMRVLAVDDD TCL++L+ LR CQY VT T++AITALKMLREN+N FDLVISDV
Sbjct: 12 DQFPIGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDV 71
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+MPDMDGFKLLELVGLEMDLPV+MLSA D KLVMKGI HGACDYLLKPVR+E+LKN WQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQ 131
Query: 138 HVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDD------------------ 179
HVIRR++ DP+DQN S + R+ + G+ E G+ D
Sbjct: 132 HVIRRRRFDPRDQNNSD---SRDKRQGPGEGGQGSSEPGNPDHGKLNKKRKDQNEDDDEE 188
Query: 180 ----GHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENV 235
GH+NE+ ++QKKPRVVW+ ELH KF+ AVN LG+D+AVPKKILDLMNVE LTRENV
Sbjct: 189 NDENGHDNEDPSSQKKPRVVWSVELHRKFVAAVNQLGIDRAVPKKILDLMNVEKLTRENV 248
Query: 236 ASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSA 294
ASHLQK+RL LKR+ +A MVA++GS DS+YL +L+G G ++++ G+L +S
Sbjct: 249 ASHLQKYRLYLKRISCVANQQANMVAALGSTDSTYLH--SLNGLGNFYNLSGSGQLPNST 306
Query: 295 LSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRNS 354
S+ P M+GRLN+ +G+ MH ++SS M++ G Q+ S N I K +Q N
Sbjct: 307 F-RSFPPSGMLGRLNTPSGMGMHCLSSSEMVQLGHLQN---SSNPINKLEQ----LQHNK 358
Query: 355 NLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAVGSSSSSVSTSL 414
+++ E +T IGD T F A++GF D ++ SSSS+ +
Sbjct: 359 GIIR------------VGELSTTIGD------STVFPASSGFPDTKMTSSRSSSSLLVAA 400
Query: 415 SNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRCQESWQDAVQ 474
++ +MLQ + + Q R NQ+S T+ L S+F DHGRC ++W AVQ
Sbjct: 401 NSPLMLQGHSQENQRRGGLRNQNSATL---------LNAELPSSFPDHGRCNDNWSTAVQ 451
Query: 475 LSKSSSISLPLGEPFILDQVPPN--KDNI----LSSNCYL-DISSSIANSTHLENSRGDL 527
S S S PL + F + P+ +DNI L S L D+S + L +SR DL
Sbjct: 452 PSAIQSSSFPLSDCFKQATLHPSNLRDNISSVTLQSGTNLRDVSCVTSMPPPLPDSRTDL 511
>gi|356546098|ref|XP_003541468.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 680
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 247/550 (44%), Positives = 337/550 (61%), Gaps = 56/550 (10%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
V D+FP+GMRVLAVDDD+TCL +LE LR+CQY VT TN+AI AL+MLR+NRN FDLVIS
Sbjct: 3 VGDRFPVGMRVLAVDDDKTCLTVLENLLRKCQYNVTTTNQAIKALEMLRKNRNKFDLVIS 62
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV MPDMDGFKLLELVGLEMDLPV+MLS Y D + VM+G+ GACDYL KPVR+EEL+N
Sbjct: 63 DVNMPDMDGFKLLELVGLEMDLPVIMLSGYGDKERVMRGVIQGACDYLTKPVRIEELQNI 122
Query: 136 WQHVIRRKKVDPKDQNRSPHEF-----------EKSYRKRKDQDGEDEDEDGDDD----- 179
WQHV+RR+ +D KD+N++ E E+ R + + + D
Sbjct: 123 WQHVLRRR-IDSKDKNKTASEGKGCSMAGKFANEEKARYMAGECSQAMAPKNNTDQNIKL 181
Query: 180 GHENENS----------------TTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILD 223
G + + + QKKPR+VW ELH KF+ AVN LG+DKA PK+ILD
Sbjct: 182 GQKRKELSEDEEEEEYDKENEEHSNQKKPRLVWDAELHRKFLAAVNHLGIDKAFPKRILD 241
Query: 224 LMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGG-SH 282
LMNVEGLTRENVASHLQK+RL L++ T + MVA++GS D YL++ +++GF S
Sbjct: 242 LMNVEGLTRENVASHLQKYRLGLRK---PTQQPSMVAALGSSD-PYLQMDSVEGFRTLSG 297
Query: 283 SVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGK 342
SV G LS++ SY G + RLN +GL G+ +S + +P LSQ+ + S G
Sbjct: 298 SV---GMLSTTL--PSYASGGVFCRLNPPSGL--RGV-NSALFQPVLSQNNSMSAKAFGN 349
Query: 343 NQQAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVA 402
Q +MF AN+ S+L+QG+ TS++ N+ Q+ S I + ++ + F ++GF D R
Sbjct: 350 MQLSMFSANQTSSLLQGIPTSIDANKFQQNRSPG-IRKLSPLDDSSGFKVSSGFSDTRAT 408
Query: 403 VGSSSSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDH 462
V + ++ V +N ++LQ N AQ+ A+ N SSL AS+N FD G+ + LDH
Sbjct: 409 VINPNNFVHDLSNNHLLLQRNSPPAQNSGAFRNHSSLGAASVNTQSFDPGICE----LDH 464
Query: 463 GRCQESWQDAVQLSKSSSISLPLGEPFILDQVPPNK-----DNILSSNCYLDISSSIANS 517
R +SWQ Q+SK + + + + F DQ+ N S N +D SS+ A +
Sbjct: 465 NRHNKSWQGTTQISKFPTNTSAVSKVFTHDQLAQNNLKFSSSTFCSGNSPVDFSSTRAIA 524
Query: 518 THLENSRGDL 527
LE++RG L
Sbjct: 525 PPLEDARGKL 534
>gi|298103726|emb|CBM42564.1| putative B-type response regulator 22 [Populus x canadensis]
Length = 668
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 265/552 (48%), Positives = 352/552 (63%), Gaps = 41/552 (7%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
MT E+ G S+ ID+FPIGMRVLAVDDD TCL +LE LR CQY VT T++AITAL
Sbjct: 1 MTVEQGIGDSN-----IDQFPIGMRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITAL 55
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+MLREN+N FDLVISDV+MPDMDGFKLLELVGLEMDLPV+MLSA D KLVMKGI HGAC
Sbjct: 56 RMLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGAC 115
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRS-----PHEF-------EKSYRKRKDQD 168
YLLKPVR+EELK WQHVIRRKK D KD+N S P++ +K +KRKDQ+
Sbjct: 116 YYLLKPVRIEELKTIWQHVIRRKKSDNKDRNSSDNRDKPNQGSSEAVPDQKLNKKRKDQN 175
Query: 169 GEDEDEDGDDDGHENENS---TTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLM 225
G+D+++ +D+ + + TTQKKPRVVW+ ELH KF+ AVN LG+DKAVPKKILDLM
Sbjct: 176 GDDDEDHDEDEDEDEHENEDPTTQKKPRVVWSMELHRKFVAAVNQLGVDKAVPKKILDLM 235
Query: 226 NVEGLTRENVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSV 284
NVE LTRENVASHLQK+R LKR+ +A MVA++GS D+SYL++ ++ G G HS+
Sbjct: 236 NVEKLTRENVASHLQKYRHYLKRISTVANQQANMVAALGSSDASYLQMNSMSGL-GLHSL 294
Query: 285 NSPGRLSSSALSSSYVPGS-MIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKN 343
+ S+ S +P S M+ RLNS A L +HG+ S G+I+ G Q+ N +
Sbjct: 295 AGSVQFHSTPFRS--LPSSGMLDRLNSPAVLGIHGLPSPGVIQLGHVQTAPHMANGLSHF 352
Query: 344 QQAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDF-NHINSPTAFTAATGFIDARVA 402
Q P N N N++QG+ LE +Q+ ++ +I + H++ +F ++G + ++
Sbjct: 353 QPVGHPGN-NGNILQGMPMPLELDQIQSNKGVNYIPELPTHLDDTASFPVSSGSTNMKII 411
Query: 403 VGSSSSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDH 462
GSS+S + +ML+ + Q G QSSL+ SLN Y SS+F DH
Sbjct: 412 AGSSNSPFVGVSNKHLMLEGHDQGLQDGQKSGKQSSLSAGSLNPGY-------SSHFPDH 464
Query: 463 GRCQESWQDAVQLSKSSSISLPLGEPFILDQVPPN--KDN-----ILSSNCYLDISSSIA 515
GR ++W +AVQ + + S S L + F + P+ +D + S N D+SS
Sbjct: 465 GRRNDNWSNAVQSNGAQSDSFTLNDYFKQSTLHPSAIRDRMSTMALQSRNNPCDVSSVST 524
Query: 516 NSTHLENSRGDL 527
HL++S+ DL
Sbjct: 525 LPIHLQDSKADL 536
>gi|356507378|ref|XP_003522444.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 656
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 246/528 (46%), Positives = 332/528 (62%), Gaps = 47/528 (8%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
MT E+K S DE FP+GMRVLAVDDD TCL +L+ L+ CQY VT TN+AI AL
Sbjct: 1 MTVEKKRNDSGDE------FPVGMRVLAVDDDPTCLLVLKTLLQRCQYHVTTTNQAIKAL 54
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+LRE+++ FDLVISDV+MPDMDGFKLLELVGLEMDLPV+MLSA DTK+VMKGI+HGAC
Sbjct: 55 ALLREHKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDTKMVMKGISHGAC 114
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPH---------------------EFEK 159
DYLLKPVRMEELKN WQHVIRRKK D K++N++ + + EK
Sbjct: 115 DYLLKPVRMEELKNIWQHVIRRKKFDSKEKNKTSNLDKPTSNSGNGLGSSGTGNSDQNEK 174
Query: 160 SYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPK 219
+KRKDQD +++++ +D +NE+ + QKKPRVVW+ +LH KF+ AVN LG+DKAVPK
Sbjct: 175 LTKKRKDQDEDEDEDQENDL--DNEDPSAQKKPRVVWSVDLHRKFVAAVNQLGIDKAVPK 232
Query: 220 KILDLMNVEGLTRENVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGF 278
KILDLMNVE LTRENVASHLQK+RL LKR+ +A MVA++G D SYLR+ ++ G
Sbjct: 233 KILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGVADPSYLRMSSVSGV 292
Query: 279 GGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFN 338
G +++ G+L ++ S+ P +I RLN+ AGL++HG SG+++ SQ+ N + N
Sbjct: 293 GHVQTLSGSGQLHNNNF-RSFPPSGIINRLNTPAGLNVHGFP-SGVLQLSQSQNLNNA-N 349
Query: 339 TIGKNQQAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHI-NSPTAFTAATGFI 397
K Q + P N+N VQG+ S+ +Q+ ++ + + + ++ T F
Sbjct: 350 DHHKFQSVIVPVNQNG--VQGMTVSVGLDQLQNNKVVMSVQNLTTVFDAKTTFPIPNKLP 407
Query: 398 DARVAVGSSSSSVSTSL--SNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHD 455
D R + +S S S +N +ML+ P +Q G SS +VAS + +
Sbjct: 408 DPRPKITNSVSHTSDVHFSNNALMLEPRPQGSQGSVRIGTLSS-SVASQHSEF------- 459
Query: 456 SSNFLDHGRCQESWQDAVQLSKSSSISLPLGEPFILDQVPPNKDNILS 503
S + LD GR ++W AVQ S + P E F +PP DN+ S
Sbjct: 460 SLSLLDQGRYSDNWTSAVQPSVIQTNFFPPSECFRQTNIPP-ADNMAS 506
>gi|224141943|ref|XP_002324320.1| type-b response regulator [Populus trichocarpa]
gi|222865754|gb|EEF02885.1| type-b response regulator [Populus trichocarpa]
Length = 661
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 256/549 (46%), Positives = 341/549 (62%), Gaps = 43/549 (7%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
MT E+ G S+ ID+FPIGMRVLAVDDD TCL +LE LR CQY VT T++AITAL
Sbjct: 1 MTVEQGIGDSN-----IDQFPIGMRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITAL 55
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+MLREN+N FDLVISDV+MPDMDGFKLLELVGLEMDLPV+MLSA D KLVMKGI HGAC
Sbjct: 56 RMLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGAC 115
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRS-----PHEF-------EKSYRKRKDQD 168
YLLKPVR+EELK WQHVIRRKK D KD+N S P++ +K +KRKDQ+
Sbjct: 116 YYLLKPVRIEELKTIWQHVIRRKKSDNKDRNSSDNRDKPNQGSSEAVPDQKLNKKRKDQN 175
Query: 169 GEDEDEDGDDDGHENENS-TTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNV 227
G+++++ +D+ TTQKKPRVVW+ ELH KF+ AVN LG+DKAVPKKILDLMNV
Sbjct: 176 GDEDEDHDEDEDEHENEDPTTQKKPRVVWSVELHRKFVAAVNQLGVDKAVPKKILDLMNV 235
Query: 228 EGLTRENVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNS 286
E LTREN K+R LKR+ +A MVA++GS D+SYL++ ++ G HS+
Sbjct: 236 EKLTREN------KYRHYLKRISTVANQQANMVAALGSSDASYLQMNSMSVL-GLHSLAG 288
Query: 287 PGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQA 346
+ S+ S G M+ RLNS A L +HG+ S G+I+ G Q+ + N + Q
Sbjct: 289 SVQFHSTPFRSLQSSG-MLDRLNSPAVLGIHGLPSPGVIQLGHVQTAPHTANGLSHFQPV 347
Query: 347 MFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDF-NHINSPTAFTAATGFIDARVAVGS 405
N N N++QG+ LE +Q+ ++ +I + H++ +F ++G D ++ GS
Sbjct: 348 GHRGN-NGNILQGMPMPLELDQIQSNKGVNYIPELPTHLDDTASFPVSSGSTDMKIIAGS 406
Query: 406 SSSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRC 465
S+S + +ML+ + Q G QSSL+ SLN Y SS+F DHGRC
Sbjct: 407 SNSPFVGVSNKHLMLEGHGQGLQDGQKSGKQSSLSAGSLNPGY-------SSHFPDHGRC 459
Query: 466 QESWQDAVQLSKSSSISLPLGEPFILDQVPPN--KDN-----ILSSNCYLDISSSIANST 518
++W +AV + + S S L + F + P+ +D + S N D+SS
Sbjct: 460 NDNWSNAVPSNGAQSDSFTLNDYFKQSTLHPSAIRDRMSTMALQSRNNPCDVSSVSTLPM 519
Query: 519 HLENSRGDL 527
HL++S+ DL
Sbjct: 520 HLQDSKADL 528
>gi|326515596|dbj|BAK07044.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/409 (49%), Positives = 260/409 (63%), Gaps = 32/409 (7%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
M +E+ G+++ D+FP+GMRVLAVDDD CLK+LE LR CQY VT TN+AI AL
Sbjct: 2 MRRDERRGAAAAAT-CRDQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAIIAL 60
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+MLRENR+ FDLVISDV+MPDMDGFKLLELVGLEMDLPV+MLS +TK VMKGI HGAC
Sbjct: 61 RMLRENRDMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGAC 120
Query: 121 DYLLKPVRMEELKNTWQHVIRRK-------KVDPKDQNRSPHEFEKSY------------ 161
DYLLKPVR+EELKN WQHV+RRK D ++ P + Y
Sbjct: 121 DYLLKPVRIEELKNIWQHVVRRKFSTRDSLNADMYEECNKPPSSDSDYLYDQVKCGSSVQ 180
Query: 162 -----RKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKA 216
+KRK+ E+EDEDGD G +N++ + K+PRVVW+ ELH KF+ AVN LG+DKA
Sbjct: 181 SGRPNKKRKEYHSEEEDEDGDSSGQDNDDPSAPKRPRVVWSVELHRKFVTAVNHLGIDKA 240
Query: 217 VPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGAL 275
VPK+IL+LMNVE LTRENVASHLQK+R+ L+RL + +AG+VA++G +D +LR+ A
Sbjct: 241 VPKRILELMNVEKLTRENVASHLQKYRVYLRRLSAVASQQAGIVAALGGRD-PFLRMDAF 299
Query: 276 DGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNT 335
+G G + SP +ALS+ G + N+ + + G+A+S I G S
Sbjct: 300 EGLQGYQAFTSP-----AALSTFGAHGLLNSPRNNQTAVVIQGVATSRSIPTGSSSCTTN 354
Query: 336 SFNTIGKNQQAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHI 384
N P NR+ NL QG+ TSL Q+ Q GD + I
Sbjct: 355 PLIGDAANYHLSPPGNRHGNLAQGLVTSLGQTQLEQKWMNEGSGDLSSI 403
>gi|109631194|gb|ABG35773.1| SRR391 [Striga asiatica]
Length = 541
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/453 (48%), Positives = 281/453 (62%), Gaps = 71/453 (15%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
MT E+ G + + + FP+GMRVLAVDDD CLK+L+ LR+CQY V+ T++A AL
Sbjct: 1 MTVEKIKGDNEN----CENFPVGMRVLAVDDDPICLKLLDTLLRKCQYHVSTTSQARMAL 56
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
KMLREN++ FDLVISDV+MPDMDGFKLL+ VGLEMDLPV+MLSA SD KLVMKG+ HGAC
Sbjct: 57 KMLRENKDRFDLVISDVHMPDMDGFKLLDQVGLEMDLPVIMLSANSDPKLVMKGVTHGAC 116
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRS-----PHEF------------------ 157
DYL+KPVR+EEL+N WQHVIRR+K +++N+S P++
Sbjct: 117 DYLVKPVRIEELRNIWQHVIRRRKSVTRNENKSADQAKPNQIASGEGGQLGGTIPGENAD 176
Query: 158 ---EKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLD 214
+ + RKRKD+ EDE EDG+ ENE+ TQKKPRVVW+ ELH KF+ AVN LG++
Sbjct: 177 QNGKTNIRKRKDE--EDESEDGN----ENEDPATQKKPRVVWSIELHRKFVAAVNQLGIE 230
Query: 215 KAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIG 273
KAVPK+ILDLMNVEGLTRENVASHLQK+RL LKR+ T +A M A+ G KDS ++R+G
Sbjct: 231 KAVPKRILDLMNVEGLTRENVASHLQKYRLYLKRISTVATQQANMAAAFGVKDSPFMRMG 290
Query: 274 ALDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSF 333
FGG L ++A Y PG+M+GR+N +++ I+ S I+P
Sbjct: 291 P---FGG---------LPNAAF-PHYSPGAMLGRINPPPNMNLRNISPSAFIQP------ 331
Query: 334 NTSFNTIGKNQQAMFPANRNSNLVQGVQTSLE-------PNQMPQSESTTHIGDFNHINS 386
SF+ + K + N NL G+Q SLE PN+ P E T G N IN
Sbjct: 332 -NSFSALNKMHPGLANPNPGQNLFPGIQLSLELDPNKQVPNKFP--EQGTIGGPSNVING 388
Query: 387 PTAFTAATGFIDARVAVGSSSSSV-STSLSNLM 418
T G +G S SV S S LM
Sbjct: 389 NFQQTMNNGGF----GIGPDSFSVGSIETSGLM 417
>gi|357138369|ref|XP_003570765.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 615
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 210/458 (45%), Positives = 292/458 (63%), Gaps = 36/458 (7%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
MT E G S +DG D+FP+GMRVLAVDDD TCLK+LE L C Y VT T +A TAL
Sbjct: 1 MTVE--GRVSVVDDGR-DRFPVGMRVLAVDDDPTCLKVLESLLLRCDYHVTTTGQAATAL 57
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+MLREN++ FDLVISDV+MPDMDGFKLLELVGLEMDLPV+MLSA +T+ VMKGI HGAC
Sbjct: 58 RMLRENKDRFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGAC 117
Query: 121 DYLLKPVRMEELKNTWQHVIRRK-KVDPKDQNRSPHEFEKS-----------YRKRKDQD 168
DYLLKPVR+E+LK WQHV+RR K D + + + + + R+D++
Sbjct: 118 DYLLKPVRLEQLKTIWQHVVRRNTKTRGNDNDDAGQKVQNGDGENGGANRNKRQSRRDEN 177
Query: 169 GEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVE 228
G+D D D D++ +EN ++++QKKPRVVW+ ELH KF+ AVN LG+DKAVPKKILDLMNVE
Sbjct: 178 GDDGD-DSDENSNENADASSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVE 236
Query: 229 GLTRENVASHLQKFRLSLKRLG-NKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSP 287
+TRENVASHLQK+RL LKR+ + + +A +VA++G ++ +Y + +LD F H N+
Sbjct: 237 NITRENVASHLQKYRLYLKRMSMDASRQANLVAALGGRNPAYGNMNSLDVF--RHYNNAY 294
Query: 288 GRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQS-FNTSFNTIGKNQQA 346
GR ++ +++ R+NS + MHG+ SS ++ G +Q+ TS N +G N
Sbjct: 295 GRYPPVPTTTHSQSNNLVARMNSPSAFGMHGLLSSQPLQHGHAQTNMGTSLNDLGVNNGN 354
Query: 347 MFPANRNSNLVQGVQTS----------LEPN----QMPQSESTTHIGDFNHINSPTAFTA 392
M A + +V G + L P Q +S + H+G H++S +F++
Sbjct: 355 MIRAAQMPTMVTGTSCNSFTNISNGAPLAPANRSVQPLESSNRQHLGQI-HLSSTDSFSS 413
Query: 393 ATGFIDARVAVGSSSSSVSTSL-SNLMMLQANPHQAQS 429
G +G +S++ T++ SN+ L N +Q+
Sbjct: 414 FVGESHHFPDLGRTSNTWQTAVPSNIQELGHNGSMSQA 451
>gi|357137423|ref|XP_003570300.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 671
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 202/393 (51%), Positives = 257/393 (65%), Gaps = 33/393 (8%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP+GMRVLAVDDD CLK+LE LR CQY VT TN+A+ AL+MLRENR+ FDLVISDV
Sbjct: 15 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAVIALRMLRENRDMFDLVISDV 74
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+MPDMDGFKLLELVGLEMDLPV+MLS +TK VMKGI HGACDYLLKPVR+EEL+N WQ
Sbjct: 75 HMPDMDGFKLLELVGLEMDLPVIMLSGNGETKTVMKGITHGACDYLLKPVRIEELRNIWQ 134
Query: 138 HVIRRKKVDPKDQNR------------------------SPHEFEKSYRKRKDQDGEDED 173
HV+RRK P N SP + + +KRKD E+E
Sbjct: 135 HVVRRKFSTPDYVNLDTYEECNKPPNADSGYVYSQVTCGSPDQNGRPNKKRKDYHSEEEG 194
Query: 174 EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
ED + +G ++++ + K+PRVVW+ ELH KF+ AVN LG+DKAVPK+IL+LMNVE LTRE
Sbjct: 195 EDEESNGQDDDDPSAPKRPRVVWSVELHRKFVAAVNHLGIDKAVPKRILELMNVEKLTRE 254
Query: 234 NVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSS 292
NVASHLQK+RL L+RL + +AG+VAS+G KD +LR+GA +G G + SP
Sbjct: 255 NVASHLQKYRLYLRRLSAVASQQAGIVASLGGKD-HFLRMGAFEGLQGYQAFTSP----- 308
Query: 293 SALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAM-FPAN 351
+AL S G + N+ L + G+ASS I+ S S T+ + + N+ + N
Sbjct: 309 TALPSFSAHGLLNSPRNNQTALVIQGLASSRSIQTA-SGSSTTNHSIVDANKYHLSLRGN 367
Query: 352 RNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHI 384
+ NL QG+ TSL P Q+ Q GD + I
Sbjct: 368 QQGNLAQGLVTSLGPAQLQQKFINEETGDLSTI 400
>gi|125538347|gb|EAY84742.1| hypothetical protein OsI_06112 [Oryza sativa Indica Group]
Length = 626
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 211/476 (44%), Positives = 287/476 (60%), Gaps = 72/476 (15%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP+GMRVLAVDDD TCLKILE L CQY VT T +A TALK+LREN++ FDLVISDV
Sbjct: 23 DQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDV 82
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+MPDMDGFKLLELVGLEMDLPV+MLSA +T+ VMKGI HGACDYLLKPVR+E+L+ WQ
Sbjct: 83 HMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQ 142
Query: 138 HVIRRKKVDPKDQNRSPHEFEKSY------------------RKRKDQDGEDEDEDGDDD 179
HVIRRK D K++ +K+ RK +D++G+D D D D++
Sbjct: 143 HVIRRKNCDAKNRGNDDDAGQKAQGMNNEGESIGANRNKRQSRKSRDENGDDGD-DSDEN 201
Query: 180 GHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHL 239
+EN +S+TQKKPRVVW+ ELH KF+ AVN LG++KAVPKKILDLMNVE +TRENVASHL
Sbjct: 202 SNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILDLMNVENITRENVASHL 261
Query: 240 QKFRLSLKRLG-NKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSS 298
QK+RL LKRL + + +A + A+ G ++ +Y+ ++ FG + N+ GR + +
Sbjct: 262 QKYRLYLKRLSTDASRQANLAAAFGGRNPAYIN---MNSFG---NYNAYGRYRTVPTAGH 315
Query: 299 YVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQ-SFNTSFNTIGKNQQAMFPANRNSNLV 357
+++ R+NS + +HG+ S I+ G +Q + +TS N +G N N++
Sbjct: 316 TQANNILTRMNSPSAFGVHGLLHSQPIQLGHAQNNLSTSLNDLG--------GLNNGNMI 367
Query: 358 QGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAVGSSSSSVSTSLSNL 417
+G Q S T T +G ++ G + ++T+ +L
Sbjct: 368 RGAQMS------------------------TILTGPSGNSFPNISNG---APLATANRSL 400
Query: 418 MMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRCQESWQDAV 473
L+++ Q SR V S + F V +S F D GR +WQ AV
Sbjct: 401 QPLESSSQQHLSR----------VHSSSADPFSTLVGESPQFPDLGRTTNTWQTAV 446
>gi|115444635|ref|NP_001046097.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|49388028|dbj|BAD25144.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113535628|dbj|BAF08011.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|118790764|tpd|FAA00257.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215713506|dbj|BAG94643.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622313|gb|EEE56445.1| hypothetical protein OsJ_05635 [Oryza sativa Japonica Group]
Length = 626
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 211/476 (44%), Positives = 287/476 (60%), Gaps = 72/476 (15%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP+GMRVLAVDDD TCLKILE L CQY VT T +A TALK+LREN++ FDLVISDV
Sbjct: 23 DQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDV 82
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+MPDMDGFKLLELVGLEMDLPV+MLSA +T+ VMKGI HGACDYLLKPVR+E+L+ WQ
Sbjct: 83 HMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQ 142
Query: 138 HVIRRKKVDPKDQNRSPHEFEKSY------------------RKRKDQDGEDEDEDGDDD 179
HVIRRK D K++ +K+ RK +D++G+D D D D++
Sbjct: 143 HVIRRKNCDAKNRGNDDDAGQKAQGMNNEGESIGANRNKRQSRKSRDENGDDGD-DSDEN 201
Query: 180 GHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHL 239
+EN +S+TQKKPRVVW+ ELH KF+ AVN LG++KAVPKKILDLMNVE +TRENVASHL
Sbjct: 202 SNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILDLMNVENITRENVASHL 261
Query: 240 QKFRLSLKRLG-NKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSS 298
QK+RL LKRL + + +A + A+ G ++ +Y+ ++ FG + N+ GR + +
Sbjct: 262 QKYRLYLKRLSTDASRQANLAAAFGGRNPAYIN---MNSFG---NYNAYGRYRTVPTAGH 315
Query: 299 YVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQ-SFNTSFNTIGKNQQAMFPANRNSNLV 357
+++ R+NS + +HG+ S I+ G +Q + +TS N +G N N++
Sbjct: 316 TQANNILTRMNSPSAFGVHGLLHSQPIQLGHAQNNLSTSLNDLG--------GLNNGNMI 367
Query: 358 QGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAVGSSSSSVSTSLSNL 417
+G Q S T T +G ++ G + ++T+ +L
Sbjct: 368 RGAQMS------------------------TILTGPSGNSFPNISNG---APLATANRSL 400
Query: 418 MMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRCQESWQDAV 473
L+++ Q SR V S + F V +S F D GR +WQ AV
Sbjct: 401 QPLESSNQQHLSR----------VHSSSADPFSTLVGESPQFPDLGRTTNTWQTAV 446
>gi|326500594|dbj|BAJ94963.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 186/360 (51%), Positives = 248/360 (68%), Gaps = 22/360 (6%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP+GMRVLAVDDD TCLK+LE LR C Y VT T +A TAL+MLREN++ FDLVISDV+M
Sbjct: 18 FPVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHM 77
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGFKLLELVGLEMDLPV+MLSA +T+ VMKGI HGACDYLLKPVR+E+LK WQHV
Sbjct: 78 PDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 137
Query: 140 IRR--------------KKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENEN 185
IRR K + + +N + ++ R+ +D++G+D D D D++ ++N +
Sbjct: 138 IRRNTKNRGSDNDDASQKGPNAEGENGGANRNKRQSRRDRDENGDDGD-DSDENSNDNGD 196
Query: 186 STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLS 245
S++QKKPRVVW+ ELH KF+ AVN LG+DKAVPKKILDLMNVE +TRENVASHLQK+RL
Sbjct: 197 SSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRENVASHLQKYRLY 256
Query: 246 LKRLG-NKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSYVPGSM 304
LKR+ + + +A +VA++G ++ +Y + ++D F H N+ GR S+ ++
Sbjct: 257 LKRMSMDASRQANLVAALGGRNPAYSNMNSMDVF--RHYNNAYGRYRPVPTSTHSQSNNL 314
Query: 305 IGRLNSSAGLSMHGIAS--SGMIKPGLSQSFN--TSFNTIGKNQQAMFPANRNSNLVQGV 360
+ R+NS + MHG+ S S + G +Q+ N TS N +G N + S +V G
Sbjct: 315 VARMNSPSAYGMHGLLSPQSQPLHLGHAQNNNLGTSLNDLGVNNGNLIRTAHMSTMVTGT 374
>gi|242066838|ref|XP_002454708.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
gi|241934539|gb|EES07684.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
Length = 675
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 193/382 (50%), Positives = 254/382 (66%), Gaps = 34/382 (8%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
V D+FP+GMRVLAVDDD CLK+LE LR CQY VT TN+A+ AL+MLR+NR+ FDLVIS
Sbjct: 13 VRDQFPVGMRVLAVDDDPVCLKVLENLLRRCQYRVTTTNQAVVALRMLRQNRDLFDLVIS 72
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV+MPDMDGFKLLELVGLEMDLPV+MLS +TK VMKGI HGACDYLLKPVR+EEL+N
Sbjct: 73 DVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRLEELRNI 132
Query: 136 WQHVIRRK------------------------KVDPKDQNRSPHEFEKSYRKRKDQDGED 171
WQHV+RRK V + +P + +S +KRK+ E+
Sbjct: 133 WQHVVRRKFSNCERANIDGYEECTRPSNADFDHVHSQITGGTPDQSGRSSKKRKEYHSEE 192
Query: 172 EDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLT 231
EDE + +G EN++ + KKPRVVW+ ELH KF+ AVN LG+DKAVPK+IL+LMNVE LT
Sbjct: 193 EDEGEESNGQENDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVERLT 252
Query: 232 RENVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRL 290
RENVASHLQK+RL LKRL + +A +VA+ G D ++R+GA +G G S
Sbjct: 253 RENVASHLQKYRLYLKRLSAVASQQASIVAAFGGND-PFMRMGAFEGLQGYQS------F 305
Query: 291 SSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAM-FP 349
+SSA S+ P ++ R NS ++ G+++S I+ + + + S + K ++
Sbjct: 306 ASSAALPSFTPQGLLNR-NSPTSFALQGMSASRPIQIASNSTISHSISDPNKYHLSLPGT 364
Query: 350 ANRNSNLVQGVQTSLEPNQMPQ 371
++R NL QG+ TS+ Q+PQ
Sbjct: 365 SSRQGNLAQGLTTSVGQVQLPQ 386
>gi|218197710|gb|EEC80137.1| hypothetical protein OsI_21925 [Oryza sativa Indica Group]
Length = 696
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 196/379 (51%), Positives = 250/379 (65%), Gaps = 40/379 (10%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP+GMRVLAVDDD CLK+LE LR CQY VT TN+AITALK+LRENR+ FDLVISDV
Sbjct: 20 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDV 79
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+MPDMDGFKLLELVGLEMDLPV+MLS +TK VMKGI HGACDYLLKPVR+EEL+N WQ
Sbjct: 80 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQ 139
Query: 138 HVIRRK----------------KVDPKDQNRSPHEFE--------KSYRKRKDQDGEDED 173
HV+RRK K D + P++ +S RKRK+ GED+D
Sbjct: 140 HVVRRKFGNRERNNLDFSKECNKPQSADTDHGPYQPTCGSSDQNGRSSRKRKELHGEDDD 199
Query: 174 EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
E D+D EN+ + KKPRVVW+ ELH KF+ AVN LG+DKAVPK+IL+LMNVE LTRE
Sbjct: 200 EGDDNDYQENDEPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRE 259
Query: 234 NVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSS 292
NVASHLQK+RL LKRLG + +A +VA+ G +D S+L IGA +G + S +
Sbjct: 260 NVASHLQKYRLYLKRLGAVASQQASIVAAFGGRDPSFLHIGAFEG------LQSYQPFAP 313
Query: 293 SALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANR 352
SA S+ P ++ R +++A + +A+ P + +T T+G N+
Sbjct: 314 SAALPSFNPHGLLTRTSAAAAFGLQELAA-----PSSTIQTSTGNVTVGH----CLEENQ 364
Query: 353 NSNLVQGVQTSLEPNQMPQ 371
+NL QG+ ++ Q+ Q
Sbjct: 365 QANLAQGLTAAIGQPQLQQ 383
>gi|115466774|ref|NP_001056986.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|55771374|dbj|BAD72541.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113595026|dbj|BAF18900.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|118790746|tpd|FAA00255.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215736874|dbj|BAG95803.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635081|gb|EEE65213.1| hypothetical protein OsJ_20357 [Oryza sativa Japonica Group]
Length = 696
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 196/379 (51%), Positives = 250/379 (65%), Gaps = 40/379 (10%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP+GMRVLAVDDD CLK+LE LR CQY VT TN+AITALK+LRENR+ FDLVISDV
Sbjct: 20 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDV 79
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+MPDMDGFKLLELVGLEMDLPV+MLS +TK VMKGI HGACDYLLKPVR+EEL+N WQ
Sbjct: 80 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQ 139
Query: 138 HVIRRK----------------KVDPKDQNRSPHEFE--------KSYRKRKDQDGEDED 173
HV+RRK K D + P++ +S RKRK+ GED+D
Sbjct: 140 HVVRRKFGNRERNNLDFSKECNKPQSADTDHGPYQPTCGSSDQNGRSSRKRKELHGEDDD 199
Query: 174 EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
E D+D EN+ + KKPRVVW+ ELH KF+ AVN LG+DKAVPK+IL+LMNVE LTRE
Sbjct: 200 EGDDNDYQENDEPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRE 259
Query: 234 NVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSS 292
NVASHLQK+RL LKRLG + +A +VA+ G +D S+L IGA +G + S +
Sbjct: 260 NVASHLQKYRLYLKRLGAVASQQASIVAAFGGRDPSFLHIGAFEG------LQSYQPFAP 313
Query: 293 SALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANR 352
SA S+ P ++ R +++A + +A+ P + +T T+G N+
Sbjct: 314 SAALPSFNPHGLLTRTSAAAAFGLQELAA-----PSSTIQTSTGNVTVGH----CLEENQ 364
Query: 353 NSNLVQGVQTSLEPNQMPQ 371
+NL QG+ ++ Q+ Q
Sbjct: 365 QANLAQGLTAAIGQPQLQQ 383
>gi|115449219|ref|NP_001048389.1| Os02g0796500 [Oryza sativa Japonica Group]
gi|47497030|dbj|BAD19083.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|47497239|dbj|BAD19284.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113537920|dbj|BAF10303.1| Os02g0796500 [Oryza sativa Japonica Group]
gi|118790756|tpd|FAA00256.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215704573|dbj|BAG94206.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767879|dbj|BAH00108.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623845|gb|EEE57977.1| hypothetical protein OsJ_08721 [Oryza sativa Japonica Group]
Length = 688
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 194/381 (50%), Positives = 247/381 (64%), Gaps = 36/381 (9%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP+GMRVLAVDDD CLK+LE L CQY VT TN+A ALKMLRENR+ FDLVISDV
Sbjct: 18 DQFPVGMRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKMLRENRDMFDLVISDV 77
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+MPDMDGFKLLELVGLEMDLPV+MLS +TK V+KGI HGACDYLLKPVR+EEL+N WQ
Sbjct: 78 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNIWQ 137
Query: 138 HVIRRK----------------KVDPKDQNR--------SPHEFEKSYRKRKDQDGEDED 173
HVIRRK K D + SP + + +KRK+ E+ED
Sbjct: 138 HVIRRKFSTRDRANLDFYEECNKPPNADSDHVHGHVTCGSPDQSGRPSKKRKEYCSEEED 197
Query: 174 EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
E G+ + + ++ + KKPRVVW+ ELH KF+ AVN LG+DKAVPK+IL+LMNVE LTRE
Sbjct: 198 E-GEVNTQDIDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRE 256
Query: 234 NVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSS 292
NVASHLQK+RL LKRL + + +VA++G +D +L +G +G G + +S
Sbjct: 257 NVASHLQKYRLYLKRLSAVASQQVSIVAALGGRD-PFLHMGGFEGLQGYQA------FTS 309
Query: 293 SALSSSYVPGSMIGR-LNSSAGLSMHGIASSGMIKP-GLSQSFNTSFNTIGKNQQAMFPA 350
SA SS+ P ++ N+ A L G+ +S I+ S + + S N K ++ P
Sbjct: 310 SAALSSFTPHGLLNSPRNNPAALGTQGVPASKSIQTMSGSHTLSHSINDANKYHLSL-PG 368
Query: 351 NRNSNLVQGVQTSLEPNQMPQ 371
N+ NL QG+ TSL QM Q
Sbjct: 369 NQKGNLGQGLATSLGQTQMQQ 389
>gi|224089346|ref|XP_002308698.1| type-b response regulator [Populus trichocarpa]
gi|222854674|gb|EEE92221.1| type-b response regulator [Populus trichocarpa]
Length = 588
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 234/494 (47%), Positives = 301/494 (60%), Gaps = 87/494 (17%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
MT E+ G S+ ID+FPIGMRVLAVDDD TCL +LE LR CQY VT T++AITAL
Sbjct: 1 MTVEQGIGDSN-----IDQFPIGMRVLAVDDDPTCLLLLETLLRRCQYTVTTTSQAITAL 55
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
MLREN+N FDLVISDV+MPDMDGFKLLELVGLEMDLPV+MLSA D KLVMKGI HGAC
Sbjct: 56 SMLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGAC 115
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRS-----PHEF------EKSYRKRKDQDG 169
DYLLKPVR+EELKN WQHVIRR+K D KD+N S P++ ++ K++
Sbjct: 116 DYLLKPVRIEELKNIWQHVIRRRKYDNKDRNSSDNRDKPNQGSSEAIPDQKLNKKRKDQN 175
Query: 170 EDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEG 229
EDEDED D++ HENE+ TQKKPRV LH KF+ AVN LG+DKAVPKKILDLMNVE
Sbjct: 176 EDEDEDRDENEHENEDPATQKKPRV-----LHRKFVAAVNQLGIDKAVPKKILDLMNVEK 230
Query: 230 LTRENVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPG 288
LTREN K+RL LKR+ +A MVA++GS D+SYL++ +++G G H++ G
Sbjct: 231 LTREN------KYRLYLKRISTVANQQANMVAALGSSDASYLQMNSMNGM-GLHNLAGSG 283
Query: 289 RLSSSALSSSYVPGS-MIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAM 347
+ ++ S +P S M+ RLNS A L + G+ S G+I+ G QS S N + Q
Sbjct: 284 QFHNTPFRS--LPSSGMLSRLNSPAVLGIRGLPSPGVIRLGHVQSAPHSANGLSHFQPVG 341
Query: 348 FPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAVGSSS 407
P N N N++QG+ SLE +Q+ ++ D ++ GSS+
Sbjct: 342 HPGN-NGNILQGMPMSLELDQIQSNK------------------------DMKIIAGSSN 376
Query: 408 SSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRCQE 467
S +ML+ + + SS+F DHGRC +
Sbjct: 377 SPFVGVSGKPLMLEGHGY------------------------------SSHFPDHGRCND 406
Query: 468 SWQDAVQLSKSSSI 481
+W +AVQ + S++
Sbjct: 407 NWSNAVQSNGQSTL 420
>gi|218191747|gb|EEC74174.1| hypothetical protein OsI_09283 [Oryza sativa Indica Group]
Length = 688
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 193/381 (50%), Positives = 246/381 (64%), Gaps = 36/381 (9%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP+GMRVLAVDDD CLK+LE L CQY VT TN+A ALKMLRENR+ FDLVISDV
Sbjct: 18 DQFPVGMRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKMLRENRDMFDLVISDV 77
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+MPDMDGFKLLELVGLEMDLPV+MLS +TK V+KGI HGACDYLLKPVR+EEL+N WQ
Sbjct: 78 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNIWQ 137
Query: 138 HVIRRK----------------KVDPKDQNR--------SPHEFEKSYRKRKDQDGEDED 173
HVIRRK K D + SP + + +KRK+ E+ED
Sbjct: 138 HVIRRKFSTRDRANLDFYEECNKPPNADSDHVHGHVTCGSPDQSGRPSKKRKEYCSEEED 197
Query: 174 EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
E G+ + + ++ + KKPRVVW+ ELH KF+ AVN LG+DKAVPK+IL+LMNVE LTRE
Sbjct: 198 E-GEVNTQDIDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRE 256
Query: 234 NVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSS 292
NVASHLQK+RL LKRL + + +VA++G +D +L +G +G G + +S
Sbjct: 257 NVASHLQKYRLYLKRLSAVASQQVSIVAALGGRD-PFLHMGGFEGLQGYQA------FTS 309
Query: 293 SALSSSYVPGSMIGR-LNSSAGLSMHGIASSGMIKP-GLSQSFNTSFNTIGKNQQAMFPA 350
SA SS+ P ++ N+ A L G+ +S I+ S + + S N K ++ P
Sbjct: 310 SAALSSFTPHGLLNSPRNNPAALGTQGVPASKSIQTMSGSHTLSHSINDANKYHLSL-PG 368
Query: 351 NRNSNLVQGVQTSLEPNQMPQ 371
N+ NL QG+ SL QM Q
Sbjct: 369 NQKGNLGQGLAASLGQTQMQQ 389
>gi|357480193|ref|XP_003610382.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355511437|gb|AES92579.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 633
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 221/524 (42%), Positives = 305/524 (58%), Gaps = 66/524 (12%)
Query: 13 EDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDL 72
ED + FP+GMRVLAVDDDQT LK+LEK L C+Y VT T +++ AL++LRE R+ FDL
Sbjct: 10 EDVTEEGFPVGMRVLAVDDDQTSLKVLEKHLLTCKYNVTTTTKSVEALELLREKRSMFDL 69
Query: 73 VISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEEL 132
+ISDV MP+MDGFKLLE VGLEMDLP +MLS + D + VMKG+ GACDYL+KP+R+EEL
Sbjct: 70 IISDVNMPEMDGFKLLEQVGLEMDLPFIMLSGHDDRERVMKGVMKGACDYLVKPIRLEEL 129
Query: 133 KNTWQHVIRRKKVDPKDQNRS----------------PHEFEKSYRKRKDQDGEDEDEDG 176
KN WQHV+ RKK++ KDQN+ P + + RKRK+Q E+E +
Sbjct: 130 KNIWQHVV-RKKIESKDQNQGIISDGVSGQDTSSENIPKKNKTHGRKRKEQSEEEEADTD 188
Query: 177 DDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVA 236
+++ E+ +T+KKPR VW ELH KF+ VNLLGLDKA PKKI DLMNVEGLTRENVA
Sbjct: 189 EENDEEH---STRKKPRFVWDNELHKKFVSIVNLLGLDKAYPKKIRDLMNVEGLTRENVA 245
Query: 237 SHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALS 296
SHLQK+RLSLKR + A V + + G++ G+G ++ R+ SS L
Sbjct: 246 SHLQKYRLSLKRPSKQ-------AKVDAALDPLQQKGSVRGYGDFCTLPGSRRILSSTL- 297
Query: 297 SSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRNSNL 356
+Y M RLN+ + L+ ++ S + P SQ+ SF +Q MF A+ + +
Sbjct: 298 PTYASSGMFCRLNAPSSLNFRRMSPSAPVPPLQSQNI-LSF------KQPMFSASESLSF 350
Query: 357 VQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAVGSSSSSVSTSLSN 416
QGV+TS E NQ ++ + N I+ +AFT ++GF D R V +++SS+S
Sbjct: 351 SQGVRTSAEINQFQRNIYPLGNKNLNPIDYTSAFTVSSGFQDIRDTVNNANSSLSC---- 406
Query: 417 LMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRCQESWQDAVQLS 476
+ +N + A+ N SS+ A + F+ + SSNF
Sbjct: 407 ---ISSNNLSTHNSGAFVNHSSVGGAYVEPKSFNPATYGSSNF----------------- 446
Query: 477 KSSSISLPLGEPFILDQVPPNKDNILSSNCY-----LDISSSIA 515
+S PL E F DQ+ N N S + + +D SS++A
Sbjct: 447 --ASNPSPLSEDFNNDQISGNSLNFASPSSHFRKSPVDFSSTLA 488
>gi|312283507|dbj|BAJ34619.1| unnamed protein product [Thellungiella halophila]
Length = 539
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 185/315 (58%), Positives = 230/315 (73%), Gaps = 20/315 (6%)
Query: 17 IDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISD 76
+D+FP+GMRVLAVDDDQTCL+ILE L CQY VT T++A TALK+LREN+N FDLVISD
Sbjct: 7 LDQFPVGMRVLAVDDDQTCLRILETLLHRCQYHVTTTDQAQTALKLLRENKNKFDLVISD 66
Query: 77 VYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTW 136
V MPDMDGFKLLELVGLEMDLPV+MLSA+SD K VMKG+ HGACDYLLKPVR+EELKN W
Sbjct: 67 VDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIW 126
Query: 137 QHVIRRKKVDPKDQNRSPHEFE--------KSYRKRKDQDGEDEDEDGDDDGHENENSTT 188
QHV+R+ K + S E E K+ RKRKDQ E+E++ ++ G EN++ T
Sbjct: 127 QHVVRKGKFKKMKSSLSNGESEGNSDQNGVKANRKRKDQFEEEEED--EERGIENDDPTA 184
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
QKKPRV+WT ELH K + AV+ LG++KAVPKKILDLMNVE LTRENVASHLQKFR +LK+
Sbjct: 185 QKKPRVLWTRELHNKSLAAVDHLGVEKAVPKKILDLMNVEKLTRENVASHLQKFRSALKK 244
Query: 249 LGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSS------SALSSSYVPG 302
+ N+T + A++ + DS ++++ +L G GG H + P L S +A Y
Sbjct: 245 ITNETNQQ---ANMAAMDSHFMQMSSLKGLGGFHH-HRPIPLGSGQFHGGAATMRQYPSN 300
Query: 303 SMIGRLNSSAGLSMH 317
+GRLNS AG+ H
Sbjct: 301 RTLGRLNSLAGMFPH 315
>gi|297796727|ref|XP_002866248.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312083|gb|EFH42507.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 642
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 223/511 (43%), Positives = 296/511 (57%), Gaps = 53/511 (10%)
Query: 11 SDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNF 70
S EDG DKFP+GMRVLAVDD+ TCL+ LE+ L C+Y VT T + AL++LREN N F
Sbjct: 5 STEDGRHDKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALELLRENSNMF 64
Query: 71 DLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRME 130
DLVISDV MPD DGFKLLE +GLEMDLPV+MLSA+SD VMKGI HGACDYL+KPV ++
Sbjct: 65 DLVISDVEMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLK 123
Query: 131 ELKNTWQHVIRR------KKVDPKDQNRSPHE---FEKSYRKRKDQDGED---------- 171
EL+N W HV+++ K + P Q P E + +KRK++ +
Sbjct: 124 ELQNIWHHVVKKNIKSYAKNIGPSRQLLPPSESNLVPSASKKRKEKANDSGDEDDSDREE 183
Query: 172 -----EDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMN 226
++DGD+ G T+KKPRVVW+ ELH KF+ AV LGLDKAVPKKILDLM+
Sbjct: 184 DDGEGSEQDGDEAG-------TRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMS 236
Query: 227 VEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDG---FGGSHS 283
+EGLTRENVASHLQK+RL LK++ + + G++DSSY ++ LDG F +
Sbjct: 237 IEGLTRENVASHLQKYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQLDGLRDFTATRQ 296
Query: 284 VNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKN 343
+ S G LS S L+ P M +N + G+ SS I+ G + + S N G
Sbjct: 297 IPSSGLLSRSHLTKLQPP--MYSSIN------LQGMNSSSFIQQGHHHNSSNSANPFGTY 348
Query: 344 QQAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAV 403
+ P +N NL Q + LE Q P+S+S +IGDF I F+D+ +
Sbjct: 349 HTTLSPRIQNVNLFQRTSSPLETLQFPRSKS--YIGDFKGIGD---RAVGGSFLDSCMPF 403
Query: 404 GSSSSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHG 463
GSSS+S+ ++ +N +MLQAN Q + GNQ + N A ++ S F H
Sbjct: 404 GSSSTSLPSASTNTLMLQANYTQPLHISSDGNQPCIEGTPSNSASPNISFQGLSRFPSH- 462
Query: 464 RCQESWQDAVQLSKSSSISLPLGEPFILDQV 494
SWQ + ++ SLPL F+ DQV
Sbjct: 463 ----SWQGNLNTTRFPPSSLPLNPAFLPDQV 489
>gi|50400641|sp|Q9FGT7.2|ARR18_ARATH RecName: Full=Two-component response regulator ARR18
Length = 635
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 225/510 (44%), Positives = 296/510 (58%), Gaps = 58/510 (11%)
Query: 11 SDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNF 70
S EDG DKFP+GMRVLAVDD+ TCL+ LE+ L C+Y VT T + AL+MLREN N F
Sbjct: 5 STEDGRHDKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMF 64
Query: 71 DLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRME 130
DLVISDV MPD DGFKLLE +GLEMDLPV+MLSA+SD VMKGI HGACDYL+KPV ++
Sbjct: 65 DLVISDVEMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLK 123
Query: 131 ELKNTWQHVIRR------KKVDPKDQNRSPHEFEKSYRKRKDQ----------------- 167
EL+N W HV+++ K + P + + P + RKRKD+
Sbjct: 124 ELQNIWHHVVKKNIKSYAKLLPPSESDSVP----SASRKRKDKVNDSGDEDDSDREEDDG 179
Query: 168 DGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNV 227
+G ++D DG S T+KKPRVVW+ ELH KF+ AV LGLDKAVPKKILDLM++
Sbjct: 180 EGSEQDGDG---------SGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSI 230
Query: 228 EGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDG---FGGSHSV 284
EGLTRENVASHLQK+RL LK++ + + G++DSSY ++ LDG F + +
Sbjct: 231 EGLTRENVASHLQKYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQLDGLRDFTAARQI 290
Query: 285 NSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQ 344
S G LS S L+ P M +N + G+ SS I+ G Q+ + S N G
Sbjct: 291 PSSGLLSRSHLTKLQPP--MYSSIN------LQGMNSSSFIQQGHHQNSSNSANPFGTYH 342
Query: 345 QAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAVG 404
+ P +N NL Q + LEP Q P+S+S +IGDF + F+D + G
Sbjct: 343 STLSPRIQNVNLFQRTSSPLEPLQFPRSKS--YIGDFKGLGD---RAIGGSFLDTCMPFG 397
Query: 405 SSSSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGR 464
SSS+S+ ++ +N +MLQAN Q + G Q + N A ++ S F H
Sbjct: 398 SSSTSLPSASTNPLMLQANYTQPLHIASDGIQPCIEGTPSNSASPNISFQGLSRFPGH-- 455
Query: 465 CQESWQDAVQLSKSSSISLPLGEPFILDQV 494
SWQ + ++ SLPL F+ DQV
Sbjct: 456 ---SWQGNLNTTRFPPSSLPLNLAFLPDQV 482
>gi|242064244|ref|XP_002453411.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
gi|241933242|gb|EES06387.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
Length = 631
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/340 (52%), Positives = 235/340 (69%), Gaps = 30/340 (8%)
Query: 15 GVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVI 74
G D+FP+GMRVLAVDDD TCLK+LEK L+ CQY VT T +A TALK+LRE ++ FDLVI
Sbjct: 19 GAKDQFPVGMRVLAVDDDPTCLKLLEKLLQHCQYHVTTTGQAATALKLLREKKDQFDLVI 78
Query: 75 SDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKN 134
SDV+MPDMDGFKLLELVGLEMDLPV+MLSA +T+ VMKGI HGACDYLLKPVR+E+L+
Sbjct: 79 SDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLRT 138
Query: 135 TWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGD----------------- 177
WQHV+RR+ D K+ ++ + S +K + E ++ G+
Sbjct: 139 IWQHVVRRRSCDAKNNG---NDNDDSGKKLQVVSAEGDNGGGNRNKRTSRRGRDDNGDDG 195
Query: 178 ----DDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
++ +EN +S+TQKKPRVVW+ ELH KF+ AVN LG+DKAVPKKILDLMNVE +TRE
Sbjct: 196 DDSDENSNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRE 255
Query: 234 NVASHLQKFRLSLKRL-GNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSS 292
NVASHLQK+RL LKRL + + +A + A+ G ++ +Y+ +G LD F N+ GR
Sbjct: 256 NVASHLQKYRLYLKRLSADASRQANLTAAFGGRNPAYVNMG-LDAF---RQYNAYGRYRP 311
Query: 293 SALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQS 332
++ P +++ R+NS A MHG+ S ++ G +Q+
Sbjct: 312 VPTTNHSQPNNLLARMNSPA-FGMHGLLPSQPLQIGHTQN 350
>gi|242092234|ref|XP_002436607.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
gi|241914830|gb|EER87974.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
Length = 659
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 198/420 (47%), Positives = 263/420 (62%), Gaps = 49/420 (11%)
Query: 4 EEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKML 63
EEKG + + D+FP+GMRVLAVDDD CLK+LE LR CQY VT TN+AITALKML
Sbjct: 2 EEKGAITGRRER--DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTTTNQAITALKML 59
Query: 64 RENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYL 123
RENR+ +DLVISDV+MPDMDGFKLLELVGLEMDLPV+MLS +TK VMKGI HGACDYL
Sbjct: 60 RENRDTYDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKSVMKGITHGACDYL 119
Query: 124 LKPVRMEELKNTWQHVIRRK-------KVDP-KDQNRSPH----------------EFEK 159
LKPVR+EEL+N WQHV+RRK +D KD N+ P + +
Sbjct: 120 LKPVRIEELRNIWQHVVRRKFSKRERSNLDIYKDFNKLPSADPCHGHNQITAGASDQSGR 179
Query: 160 SYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPK 219
+KRK+ ++ED+ ++D E + + KKPRVVW+ ELH KF+ AVN LG+DKAVPK
Sbjct: 180 ISKKRKEMHSDEEDDGEENDFQEGDEPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPK 239
Query: 220 KILDLMNVEGLTRENVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGF 278
+IL+LMNVE LTRENVASHLQK+RL LKRL + +A +VA+ G +D ++L +GA +G
Sbjct: 240 RILELMNVEKLTRENVASHLQKYRLYLKRLSAVASQQASIVAAFGGRDPAFLHMGAFEG- 298
Query: 279 GGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSA--------GLSMHGIASSGMIKPGLS 330
+ S + A SS+ P ++GR +++ +++ ++G+I
Sbjct: 299 -----LQSYQPFAPCAALSSFSPHGLLGRTSAATFGVPELAPAMTVQTATNNGIISHCAG 353
Query: 331 QSFNTSFNTIGKNQQAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAF 390
+ + + + +NQQA NL QG TSL Q+ Q D + + S +A
Sbjct: 354 DANDFQLSGLQENQQA--------NLGQGSATSLGLPQLQQKWIQQETNDLSAVFSGSAL 405
>gi|413939317|gb|AFW73868.1| putative two-component response regulator family protein [Zea mays]
Length = 676
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 191/386 (49%), Positives = 250/386 (64%), Gaps = 40/386 (10%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
V D+FP+GMRVLAVDDD CLK+LE LR CQY VT TN+A+ AL MLR+NR+ FDLVIS
Sbjct: 13 VRDQFPVGMRVLAVDDDPVCLKVLENLLRRCQYHVTTTNQAVVALSMLRQNRDLFDLVIS 72
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV+MPDMDGFKLLELVGLEMDLPV+MLS +TK VMKGI HGACDYLLKPVR+EEL+N
Sbjct: 73 DVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRLEELRNI 132
Query: 136 WQHVIRRKKVDPKDQNR------------------------SPHEFEKSYRKRKDQDGED 171
WQHV+RRK + N P + + +KRK+ E+
Sbjct: 133 WQHVVRRKFSNCDRANNDGYEECNRPSNADFDLAHSQITAGPPDQSGRPSKKRKEYHSEE 192
Query: 172 EDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLT 231
EDE + +G +N++ + KKPRVVW+ ELH KF+ AVN LG+DKAVPK+IL+LMNVE LT
Sbjct: 193 EDEGEESNGQDNDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVERLT 252
Query: 232 RENVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRL 290
RENVASHLQK+RL LKRL + +A +VA++G D ++R+ A +G G S +
Sbjct: 253 RENVASHLQKYRLYLKRLSAVASQQASIVAALGGND-PFMRMSAFEGLHGYQSF-----V 306
Query: 291 SSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIG---KNQQAM 347
SS+AL S+ P ++ R N+ A ++ G+++S I+ ++ T ++IG
Sbjct: 307 SSAAL-PSFSPQGLLNR-NNPASFAIQGVSASRPIQ--IATGNTTMSHSIGDPNDKYHLS 362
Query: 348 FPANR--NSNLVQGVQTSLEPNQMPQ 371
P NL QG+ T + Q+PQ
Sbjct: 363 LPGTSCLQGNLAQGLPTPVGQVQLPQ 388
>gi|413952914|gb|AFW85563.1| putative two-component response regulator family protein [Zea mays]
Length = 669
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 206/424 (48%), Positives = 260/424 (61%), Gaps = 55/424 (12%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP+GMRVLAVDDD CLK+LE LR CQY V TN+AITALK+LRENR+ FDLVISDV
Sbjct: 22 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVITTNQAITALKLLRENRDMFDLVISDV 81
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+MPDMDGFKLLELVGLEMDLPV+MLS +TK VMKGI HGACDYLLKPVR+EEL+N WQ
Sbjct: 82 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKSVMKGITHGACDYLLKPVRIEELRNIWQ 141
Query: 138 HVIRRK-------KVDP-KDQNRSP-----HEFEKSY---------------RKRKDQDG 169
HV+RRK +D KD NR P H + RKRK+
Sbjct: 142 HVVRRKFSKRERSNLDVYKDFNRLPGADPCHSHGHGHGQTTAGASDQSGRIGRKRKEMHS 201
Query: 170 EDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEG 229
++ED+ ++D E + + KKPRVVW+ ELH KF+ AVN LG+DKAVPK+IL+LMNVE
Sbjct: 202 DEEDDGEENDFQEGDEPSAAKKPRVVWSIELHRKFVAAVNQLGIDKAVPKRILELMNVEK 261
Query: 230 LTRENVASHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPG 288
LTRENVASHLQK+RL LKRL + +A +VA+ G +D +L +GA +G + S
Sbjct: 262 LTRENVASHLQKYRLYLKRLSAVASQQASIVAAFGGRD-PFLHMGAFEG------LQSYQ 314
Query: 289 RLSSSALSSSYVP--GSMIGRLNSSA--------GLSMHGIASSGMIKPGLSQSFNTSFN 338
+ A SS++P GS+ GR ++A +++ AS+GMI + +
Sbjct: 315 PFAPCAALSSFIPHHGSL-GRTTAAAFGVPELAPAITVQAAASNGMISHCAGDASKFQLS 373
Query: 339 TIGKNQQAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFID 398
I +NQQ NL QG TSL Q+ Q GD + + S +A
Sbjct: 374 GIQENQQP--------NLGQGSATSLGLPQLQQKWIQQETGDLSAVFSGSALANTLSGAL 425
Query: 399 ARVA 402
RVA
Sbjct: 426 QRVA 429
>gi|297798770|ref|XP_002867269.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313105|gb|EFH43528.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 195/383 (50%), Positives = 254/383 (66%), Gaps = 31/383 (8%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
V+D+FP+GMRVLAVDDDQTCL+IL+ L CQY VT TN+A TAL++LREN+N FDLVIS
Sbjct: 9 VLDQFPVGMRVLAVDDDQTCLRILQTLLHRCQYHVTTTNQAQTALELLRENKNKFDLVIS 68
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV MPDMDGFKLLELVGLEMDLPV+MLSA+SD K VMKG+ HGACDYLLKPVR+EELKN
Sbjct: 69 DVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNI 128
Query: 136 WQHVIR--RKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPR 193
WQHV+R + K + + +K+ RKRK+Q E+E+E + G+EN++ T QKKPR
Sbjct: 129 WQHVVRKSKLKKNKSSVSNGAANSDKANRKRKEQYEEEEEE---ERGNENDDPTAQKKPR 185
Query: 194 VVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKT 253
V+WT ELH KF+ AV+ LG++KAVPKKILDLMNV+ LTRENVASHLQKFR++LK++ +K
Sbjct: 186 VLWTHELHNKFLAAVDHLGVEKAVPKKILDLMNVDKLTRENVASHLQKFRVALKKMSDK- 244
Query: 254 LEAGMVASVGSKDSSYLRIGALDGFGG-SHSVNSP---GRLSSSALSSSYVPGSM-IGRL 308
A A+ + +S +++ + G GG H P G+ A + P + +GRL
Sbjct: 245 --ANQQATRAALESHLMQMSSHKGLGGFYHHRGIPVGTGQFHGGATMMRHYPSNRNLGRL 302
Query: 309 NSSAGLSMHGIASS-------------GMIKPGLSQ-----SFNTSFNTIGKNQQAMFPA 350
NS AG ++SS G+ P L + + N +F + Q ++ A
Sbjct: 303 NSLAGGMFQPVSSSFPRNHNDGGNILQGLPLPPLEELQINNNINKAFPSFTSQQNSLMVA 362
Query: 351 NRNSNLVQGVQTSLEPNQMPQSE 373
N L++G Q S P P E
Sbjct: 363 PNNLLLLEGHQQSSSPGFSPHFE 385
>gi|162460462|ref|NP_001104863.1| response regulator 9 [Zea mays]
gi|14189890|dbj|BAB55874.1| response regulator 9 [Zea mays]
Length = 631
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/346 (52%), Positives = 235/346 (67%), Gaps = 31/346 (8%)
Query: 15 GVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVI 74
G D+FP+GMRVLAVDDD TCLKILE L CQY VT T +A TALK+LRE ++ FDLVI
Sbjct: 17 GAKDQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQFDLVI 76
Query: 75 SDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKN 134
SDV+MPDMDGFKLLELVGLEMDLPV+MLSA +T+ VMKGI HGACDYLLKPVR+E+L+
Sbjct: 77 SDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLRT 136
Query: 135 TWQHVIRRKKVDPKDQNRSPHEFEKSYRKRK------DQDGEDEDEDGDDDGH------- 181
WQHV+RR+ D K+ S ++ + S +K + D G + ++ G
Sbjct: 137 IWQHVVRRRSCDAKN---SGNDNDDSGKKLQVVSVEGDNGGVNRNKRISRKGRDDNGDDG 193
Query: 182 --------ENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
EN +S++QKKPRVVW+ ELH KF+ AVN LG+DKAVPKKILDLMNVE +TRE
Sbjct: 194 DDSDDNSNENGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRE 253
Query: 234 NVASHLQKFRLSLKRL-GNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSS 292
NVASHLQK+RL LKRL + + +A + A+ G ++ +Y+ +G LD F N+ GR
Sbjct: 254 NVASHLQKYRLYLKRLSADASRQANLTAAFGGRNPAYVNMG-LDAF---RQYNAYGRYRP 309
Query: 293 SALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQ-SFNTSF 337
++ P +++ R+NS A MHG+ S ++ G +Q + NTS
Sbjct: 310 VPTTNHSQPNNLLARMNSPA-FGMHGLLPSQPLQIGHNQNNLNTSL 354
>gi|323388735|gb|ADX60172.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/337 (52%), Positives = 227/337 (67%), Gaps = 24/337 (7%)
Query: 15 GVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVI 74
G D+FP+GMRVLAVDDD TCLKILE L CQY VT T +A TALK+LRE ++ FDLVI
Sbjct: 17 GAKDQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQFDLVI 76
Query: 75 SDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKN 134
SDV+MPDMDGFKLLELVGLEMDLPV+MLSA +T+ VMKGI HGACDYLLKPVR+E+L+
Sbjct: 77 SDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLRT 136
Query: 135 TWQHVIRRKKVDPKDQNRSPHEFEKSYR---KRKDQDGEDEDEDGDDDGH---------- 181
WQHV+RR+ D K+ + K + D G + ++ G
Sbjct: 137 IWQHVVRRRSCDAKNSGNDNDDSGKKLQVVSAEGDNGGVNRNKRISRKGRDDNGDDGDDS 196
Query: 182 -----ENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVA 236
EN +S++QKKPRVVW+ ELH KF+ AVN LG+DKAVPKKILDLMNVE +TRENVA
Sbjct: 197 DDNSNENGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRENVA 256
Query: 237 SHLQKFRLSLKRL-GNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSAL 295
SHLQK+RL LKRL + + +A + A+ G ++ +Y+ +G LD F N+ GR
Sbjct: 257 SHLQKYRLYLKRLSADASRQANLTAAFGGRNPAYVNMG-LDAF---RQYNAYGRYRPVPT 312
Query: 296 SSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQS 332
++ P +++ R+NS A MHG+ S ++ G +Q+
Sbjct: 313 TNHSQPNNLLARMNSPA-FGMHGLLPSQPLQIGHNQN 348
>gi|323388705|gb|ADX60157.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 176/337 (52%), Positives = 227/337 (67%), Gaps = 24/337 (7%)
Query: 15 GVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVI 74
G D+FP+GMRVLAVDDD TCLKILE L CQY VT T +A TALK+LRE ++ FDLVI
Sbjct: 17 GAKDQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQFDLVI 76
Query: 75 SDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKN 134
SDV+MPDMDGFKLLELVGLEMDLPV+MLSA +T+ VMKGI HGACDYLLKPVR+E+L+
Sbjct: 77 SDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLRT 136
Query: 135 TWQHVIRRKKVDPKDQNRSPHEFEKSYR---KRKDQDGEDEDEDGDDDGH---------- 181
WQHV+RR+ D K+ + K + D G + ++ G
Sbjct: 137 IWQHVVRRRSCDAKNSGNDNDDSGKKLQVVSAEGDNGGVNRNKRISRKGRDDNGDDGDDS 196
Query: 182 -----ENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVA 236
EN +S++QKKPRVVW+ ELH KF+ AVN LG+DKAVPKKILDLMNVE +TRENVA
Sbjct: 197 DDNSNENGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRENVA 256
Query: 237 SHLQKFRLSLKRL-GNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSAL 295
SHLQK+RL LKRL + + +A + A+ G ++ +Y+ +G LD F N+ GR
Sbjct: 257 SHLQKYRLYLKRLSADASRQANLTAAFGGRNPAYVNMG-LDAF---RQYNAYGRYRPVPT 312
Query: 296 SSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQS 332
++ P +++ R+NS A MHG+ S ++ G +Q+
Sbjct: 313 TNHSQPNNLLARMNSPA-FGMHGLLPSQPLQIGHNQN 348
>gi|25365080|pir||C84645 hypothetical protein At2g25180 [imported] - Arabidopsis thaliana
Length = 573
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 200/376 (53%), Positives = 251/376 (66%), Gaps = 38/376 (10%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
+D+FP+GMRVLAVDDDQTCLKILE LR CQY VT TN+A AL++LREN+N FDLVIS
Sbjct: 9 ALDQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVIS 68
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV MPDMDGFKLLELVGLEMDLPV+MLSA+SD K VMKG+ HGACDYLLKPVR+EELKN
Sbjct: 69 DVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNI 128
Query: 136 WQHVIRRK---------KVDPKD-------QNRSPHEFEKSYRKRKDQDGEDEDEDGDDD 179
WQHV+R + D +D N P+ K RKRKDQ EDEDED D
Sbjct: 129 WQHVVRSRFDKNRGSNNNGDKRDGSGNEGVGNSDPNN-GKGNRKRKDQYNEDEDEDRD-- 185
Query: 180 GHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHL 239
+N++S QKK RVVWT ELH KF+ AVN LG +KA+PKKILDLMNVE LTRENVASHL
Sbjct: 186 --DNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHL 243
Query: 240 QKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALS-SS 298
QKFRL LKR+ + ++A + + ++++ LDGF G+ A + S
Sbjct: 244 QKFRLYLKRISGVANQQAIMA---NSELHFMQMNGLDGFHHRPIPVGSGQYHGGAPAMRS 300
Query: 299 YVPGSMIGRLNSSAGLSMHGIAS--SGMIKPGLSQSFNTSFNTIGK-NQQAMFPANRN-- 353
+ P ++GRLNSS+G+ + ++S +GM F + IGK + + P N +
Sbjct: 301 FPPNGILGRLNSSSGIGVRSLSSPPAGM--------FLQNQTDIGKFHHVSSLPLNHSDG 352
Query: 354 SNLVQGVQTSLEPNQM 369
N++QG+ LE +Q+
Sbjct: 353 GNILQGLPMPLEFDQL 368
>gi|240254528|ref|NP_180090.6| response regulator 12 [Arabidopsis thaliana]
gi|378405150|sp|P62598.2|ARR12_ARATH RecName: Full=Two-component response regulator ARR12
gi|330252573|gb|AEC07667.1| response regulator 12 [Arabidopsis thaliana]
Length = 596
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 195/380 (51%), Positives = 247/380 (65%), Gaps = 46/380 (12%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
+D+FP+GMRVLAVDDDQTCLKILE LR CQY VT TN+A AL++LREN+N FDLVIS
Sbjct: 9 ALDQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVIS 68
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV MPDMDGFKLLELVGLEMDLPV+MLSA+SD K VMKG+ HGACDYLLKPVR+EELKN
Sbjct: 69 DVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNI 128
Query: 136 WQHVIRRK--------------------KVDPKDQNRSPHEFEKSYRKRKDQDGEDEDED 175
WQHV+R + V DQN K RKRKDQ +ED
Sbjct: 129 WQHVVRSRFDKNRGSNNNGDKRDGSGNEGVGNSDQNNG-----KGNRKRKDQ----YNED 179
Query: 176 GDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENV 235
D+D +N++S QKK RVVWT ELH KF+ AVN LG +KA+PKKILDLMNVE LTRENV
Sbjct: 180 EDEDRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENV 239
Query: 236 ASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSAL 295
ASHLQKFRL LKR+ + ++A + + ++++ LDGF G+ A
Sbjct: 240 ASHLQKFRLYLKRISGVANQQAIMA---NSELHFMQMNGLDGFHHRPIPVGSGQYHGGAP 296
Query: 296 S-SSYVPGSMIGRLNSSAGLSMHGIAS--SGMIKPGLSQSFNTSFNTIGK-NQQAMFPAN 351
+ S+ P ++GRLN+ +G+ + ++S +GM F + IGK + + P N
Sbjct: 297 AMRSFPPNGILGRLNTPSGIGVRSLSSPPAGM--------FLQNQTDIGKFHHVSSLPLN 348
Query: 352 RN--SNLVQGVQTSLEPNQM 369
+ N++QG+ LE +Q+
Sbjct: 349 HSDGGNILQGLPMPLEFDQL 368
>gi|9759533|dbj|BAB10999.1| unnamed protein product [Arabidopsis thaliana]
Length = 632
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 221/510 (43%), Positives = 292/510 (57%), Gaps = 61/510 (11%)
Query: 11 SDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNF 70
S EDG DKFP+GMRVLAVDD+ TCL+ LE+ L C+Y VT T + AL+MLREN N F
Sbjct: 5 STEDGRHDKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMF 64
Query: 71 DLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRME 130
DLVISDV MPD DGFKLLE +GLEMDLPV+ +SD VMKGI HGACDYL+KPV ++
Sbjct: 65 DLVISDVEMPDTDGFKLLE-IGLEMDLPVI---THSDYDSVMKGIIHGACDYLVKPVGLK 120
Query: 131 ELKNTWQHVIRR------KKVDPKDQNRSPHEFEKSYRKRKDQ----------------- 167
EL+N W HV+++ K + P + + P + RKRKD+
Sbjct: 121 ELQNIWHHVVKKNIKSYAKLLPPSESDSVP----SASRKRKDKVNDSGDEDDSDREEDDG 176
Query: 168 DGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNV 227
+G ++D DG S T+KKPRVVW+ ELH KF+ AV LGLDKAVPKKILDLM++
Sbjct: 177 EGSEQDGDG---------SGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSI 227
Query: 228 EGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDG---FGGSHSV 284
EGLTRENVASHLQK+RL LK++ + + G++DSSY ++ LDG F + +
Sbjct: 228 EGLTRENVASHLQKYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQLDGLRDFTAARQI 287
Query: 285 NSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQ 344
S G LS S L+ P M +N + G+ SS I+ G Q+ + S N G
Sbjct: 288 PSSGLLSRSHLTKLQPP--MYSSIN------LQGMNSSSFIQQGHHQNSSNSANPFGTYH 339
Query: 345 QAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAVG 404
+ P +N NL Q + LEP Q P+S+S +IGDF + F+D + G
Sbjct: 340 STLSPRIQNVNLFQRTSSPLEPLQFPRSKS--YIGDFKGLGD---RAIGGSFLDTCMPFG 394
Query: 405 SSSSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGR 464
SSS+S+ ++ +N +MLQAN Q + G Q + N A ++ S F H
Sbjct: 395 SSSTSLPSASTNPLMLQANYTQPLHIASDGIQPCIEGTPSNSASPNISFQGLSRFPGH-- 452
Query: 465 CQESWQDAVQLSKSSSISLPLGEPFILDQV 494
SWQ + ++ SLPL F+ DQV
Sbjct: 453 ---SWQGNLNTTRFPPSSLPLNLAFLPDQV 479
>gi|15236580|ref|NP_194920.1| two-component response regulator ARR10 [Arabidopsis thaliana]
gi|38257358|sp|O49397.1|ARR10_ARATH RecName: Full=Two-component response regulator ARR10; AltName:
Full=Receiver-like protein 4
gi|2827643|emb|CAA16597.1| predicted protein [Arabidopsis thaliana]
gi|3549641|emb|CAA06432.1| receiver-like protein 4 [Arabidopsis thaliana]
gi|7270096|emb|CAB79910.1| predicted protein [Arabidopsis thaliana]
gi|27808620|gb|AAO24590.1| At4g31920 [Arabidopsis thaliana]
gi|110736270|dbj|BAF00105.1| predicted protein [Arabidopsis thaliana]
gi|332660579|gb|AEE85979.1| two-component response regulator ARR10 [Arabidopsis thaliana]
Length = 552
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 200/417 (47%), Positives = 267/417 (64%), Gaps = 62/417 (14%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
V+D+FP+GMRVLAVDDDQTCL+IL+ L+ CQY VT TN+A TAL++LREN+N FDLVIS
Sbjct: 9 VLDQFPVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVIS 68
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV MPDMDGFKLLELVGLEMDLPV+MLSA+SD K VMKG+ HGACDYLLKPVR+EELKN
Sbjct: 69 DVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNI 128
Query: 136 WQHVIRRKKVDPKDQNRS--PHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPR 193
WQHV+R+ K+ N S +K+ RKRK+Q E+E+E + G++N++ T QKKPR
Sbjct: 129 WQHVVRKSKLKKNKSNVSNGSGNCDKANRKRKEQYEEEEEE---ERGNDNDDPTAQKKPR 185
Query: 194 VVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKT 253
V+WT ELH KF+ AV+ LG+++AVPKKILDLMNV+ LTRENVASHLQKFR++LK++ +
Sbjct: 186 VLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRVALKKVSDDA 245
Query: 254 LEAGMVASVGSKDSSYLRIGALDGFGGSH------SVNSPGRLSSSALSSSYVPGSMIGR 307
++ A++ DS ++++ + G GG + V S + + Y +GR
Sbjct: 246 IQQANRAAI---DSHFMQMNSQKGLGGFYHHHRGIPVGSGQFHGGTTMMRHYSSNRNLGR 302
Query: 308 LNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRNSNLVQGVQTSLEPN 367
LNS +GM +P +S SF + N G N++QG
Sbjct: 303 LNS---------LGAGMFQP-VSSSFPRNHNDGG-------------NILQG-------- 331
Query: 368 QMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAVGSSSSSVSTSLSNLMMLQANP 424
+P E + N+IN AF + T S +S + SNL++L+ NP
Sbjct: 332 -LPLEELQIN----NNINR--AFPSFT----------SQQNSPMVAPSNLLLLEGNP 371
>gi|297825553|ref|XP_002880659.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
gi|297326498|gb|EFH56918.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
Length = 611
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/335 (54%), Positives = 229/335 (68%), Gaps = 36/335 (10%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
+D+FP+GMRVLAVDDDQTCLKILE LR CQY VT TN A AL++LREN+N FDLVIS
Sbjct: 9 ALDQFPVGMRVLAVDDDQTCLKILETLLRHCQYHVTTTNEAQKALELLRENKNKFDLVIS 68
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV MPDMDGFKLLELVGLEMDLPV+MLSA+SD K VMKG+ HGACDYLLKPVR+EELKN
Sbjct: 69 DVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKFVMKGVTHGACDYLLKPVRIEELKNI 128
Query: 136 WQHVIRRKKVDPKDQNRSPHEFEK------------------SYRKRKDQDGEDEDEDGD 177
WQHV+R + D+NR + +K + RKRKDQ +ED D
Sbjct: 129 WQHVVRSR----FDKNRGSNNGDKRDGSGNEGVGYSDQNNGRANRKRKDQ----YNEDDD 180
Query: 178 DDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVAS 237
++ +N++S+ QKK RVVWT ELH KF+ AVN LG +KA+PKKILDLMNVE LTRENVAS
Sbjct: 181 EEKDDNDDSSAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVAS 240
Query: 238 HLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLR----IGALDGFGGSHSVNSPGRLSSS 293
HLQKFRL LKR+ + ++A + D +L+ + LDGF G+
Sbjct: 241 HLQKFRLYLKRISGVANQQAIMA---NSDLHFLQMSSSLNGLDGFNHRPIPVGSGQFHGG 297
Query: 294 ALS-SSYVPGSMIGRLNSSAGLSMHGIAS--SGMI 325
A + S+ P ++GRLN+ +G+ + ++S +GM
Sbjct: 298 APAMRSFTPNEILGRLNTPSGIGVRNLSSPPAGMF 332
>gi|357480191|ref|XP_003610381.1| Two-component response regulator EHD1 [Medicago truncatula]
gi|355511436|gb|AES92578.1| Two-component response regulator EHD1 [Medicago truncatula]
Length = 593
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 197/463 (42%), Positives = 286/463 (61%), Gaps = 42/463 (9%)
Query: 13 EDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDL 72
E+ + FP+GMRVLAVDDDQTCLK+LEKFL C+Y VT T + + AL++LRE R+ FDL
Sbjct: 10 ENVFREDFPVGMRVLAVDDDQTCLKLLEKFLLMCKYNVTTTTKPVEALELLREKRDMFDL 69
Query: 73 VISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEEL 132
VISDV MP+MDGFKLLE VGLE+DLP +MLS D + VMKG+ GACDYL+KP+R+EEL
Sbjct: 70 VISDVSMPEMDGFKLLEQVGLEIDLPFIMLSGNDDRERVMKGVMKGACDYLVKPIRLEEL 129
Query: 133 KNTWQHVIRRKKVDPKDQNRS----------------PHEFEKSYRKRKDQDGEDEDEDG 176
KN WQHV+ RKK++ KD+N+ + + +K K+Q ++E+E+
Sbjct: 130 KNIWQHVV-RKKIESKDRNKGIITDGICSQDTSSENIANRNKTRGQKIKEQSEDEEEEEE 188
Query: 177 DDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVA 236
+ + +E +T+KKPR+VW ELH KF+ V+ L +A PKKI DLMNVEGLTRENVA
Sbjct: 189 EAEEDNDEERSTRKKPRLVWDDELHKKFVSIVSQL---EAYPKKICDLMNVEGLTRENVA 245
Query: 237 SHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALS 296
SHLQK++LSLKR + A V + +L+ ++ G+G ++ R+ SS L
Sbjct: 246 SHLQKYKLSLKRPSKQ-------ARVDAALDPHLQKNSVAGYGDFCTLPGSRRILSSTL- 297
Query: 297 SSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRNSNL 356
+Y +M RLN+ +GL++ G++SS ++ P SQ+ I +Q +F A+ +S+
Sbjct: 298 PTYASSNMFCRLNAPSGLNLRGMSSSALVPPLQSQN-------IPSYKQPLFFASESSSA 350
Query: 357 VQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAVGSSSSSVSTSLSN 416
++GV+TS+E NQ Q+ + I+ +AFT ++GF D R V +++S +S SN
Sbjct: 351 LKGVRTSVEINQFQQNIYPPGNMKLSPIDDSSAFTDSSGFQDIRANVNNANSFLSCISSN 410
Query: 417 LMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNF 459
+ Q + A+ N S+ ++ Q F+ S NF
Sbjct: 411 HL-------QTHNSRAFINHPSVGGPAMEQKSFNPATSGSYNF 446
>gi|224130444|ref|XP_002328610.1| type-b response regulator [Populus trichocarpa]
gi|222838592|gb|EEE76957.1| type-b response regulator [Populus trichocarpa]
Length = 671
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 175/393 (44%), Positives = 244/393 (62%), Gaps = 25/393 (6%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
M+ GG DG D+FP G+RVL VDDD TCL ILEK LR C+YEVT NRA AL
Sbjct: 11 MSTATSGGVWKASDGASDQFPAGLRVLVVDDDPTCLVILEKMLRTCRYEVTKCNRAEIAL 70
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+LREN+N +D+VISDV+MPDMDGFKLLE +GLEMDLPV+M+SA +VMKG+ HGAC
Sbjct: 71 SLLRENKNGYDIVISDVHMPDMDGFKLLEQIGLEMDLPVIMMSADDGKNVVMKGVTHGAC 130
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDG 180
DYL+KP+R+E LKN WQHV+R++K + KD +S E R++K + D ++
Sbjct: 131 DYLIKPIRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGGDRQQKQPEDADYSSSANEGS 190
Query: 181 HENEN--------------STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMN 226
+N ++ KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+LMN
Sbjct: 191 WKNSKRRKDEEEEAEERDDTSALKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMN 250
Query: 227 VEGLTRENVASHLQKFRLSLKRL-GNKTLEAGMVAS-VGSKDSSYLRIGALDGFGGSHSV 284
V GLTRENVASHLQK+RL L+RL G + GM +S + ++++Y + +L+G ++
Sbjct: 251 VPGLTRENVASHLQKYRLYLRRLSGVSQHQNGMGSSFISPQEATYGPLSSLNGL-DLQTL 309
Query: 285 NSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQ 344
+ G+L + +L++ G +GR + + M + + SF G+ Q
Sbjct: 310 ATAGQLPAQSLATLQAAG--LGRSTAKPRMPMPIVDQRNLF------SFENPKLRFGEGQ 361
Query: 345 QAMFPANRNSNLVQGVQTSLEPNQMPQSESTTH 377
Q + +NL+ G+ T++EPNQ+ + H
Sbjct: 362 QQHLNNGKQTNLLHGIPTTMEPNQLANLHHSAH 394
>gi|357125033|ref|XP_003564200.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 654
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 203/441 (46%), Positives = 258/441 (58%), Gaps = 57/441 (12%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
M E + G + E +D+FP+GMRVLAVDDD CLK+LE LR CQY VT TN+AITAL
Sbjct: 6 MMMEARKGLIARE---MDQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAITAL 62
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
K+LREN++ FDLVISDV+MPDMDGFKLLELVGLEMDLPV+MLS +TK V+KGI HGAC
Sbjct: 63 KLLRENKDMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGAC 122
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSP------HEFEK-----SY-------- 161
DYLLKPVR+EEL+N WQHV+RRK NR P EF K SY
Sbjct: 123 DYLLKPVRIEELRNVWQHVVRRKF-----SNREPSNLDFCKEFSKPPSADSYHGLNQVTC 177
Query: 162 ----------RKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLL 211
+KRK+ E+EDE D+D EN+ + K+PRVVW+ ELH KF+ AVN L
Sbjct: 178 GSSDQSSRACKKRKELHSEEEDEGEDNDAQENDEPSASKRPRVVWSVELHRKFVAAVNHL 237
Query: 212 GLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLR 271
G+DKAVPK+IL+LMNVE LTRENVASHLQK+RL L+RL + +A+ +L
Sbjct: 238 GIDKAVPKRILELMNVEKLTRENVASHLQKYRLYLRRLSAVASQQASIAAAFGGRDPFLH 297
Query: 272 IGALDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQ 331
+GA +G HS + + S SS+ P ++ S AG + G+ + P +
Sbjct: 298 MGAFEGL---HSYQT---FAPSVALSSFNPHGLL----SGAGATAFGLQE---LAPSKAI 344
Query: 332 SFNTSFNTIG-------KNQQAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHI 384
TS +G K N+ ++L QG+ TSL Q+ Q D + +
Sbjct: 345 QCATSNGAVGHCAGDTNKFHIVSLQENQPASLTQGLTTSLGLPQLQQKWIHQETNDLSSV 404
Query: 385 NSPTAFTAATGFIDARVAVGS 405
S +A RVA S
Sbjct: 405 FSGSALANTMSGTLQRVASSS 425
>gi|145359387|ref|NP_200616.3| response regulator 18 [Arabidopsis thaliana]
gi|332009612|gb|AED96995.1| response regulator 18 [Arabidopsis thaliana]
Length = 618
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 216/497 (43%), Positives = 286/497 (57%), Gaps = 58/497 (11%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
MRVLAVDD+ TCL+ LE+ L C+Y VT T + AL+MLREN N FDLVISDV MPD D
Sbjct: 1 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 60
Query: 84 GFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR- 142
GFKLLE +GLEMDLPV+MLSA+SD VMKGI HGACDYL+KPV ++EL+N W HV+++
Sbjct: 61 GFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKKN 119
Query: 143 -----KKVDPKDQNRSPHEFEKSYRKRKDQ-----------------DGEDEDEDGDDDG 180
K + P + + P + RKRKD+ +G ++D DG
Sbjct: 120 IKSYAKLLPPSESDSVP----SASRKRKDKVNDSGDEDDSDREEDDGEGSEQDGDG---- 171
Query: 181 HENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
S T+KKPRVVW+ ELH KF+ AV LGLDKAVPKKILDLM++EGLTRENVASHLQ
Sbjct: 172 -----SGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASHLQ 226
Query: 241 KFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDG---FGGSHSVNSPGRLSSSALSS 297
K+RL LK++ + + G++DSSY ++ LDG F + + S G LS S L+
Sbjct: 227 KYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQLDGLRDFTAARQIPSSGLLSRSHLTK 286
Query: 298 SYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRNSNLV 357
P M +N + G+ SS I+ G Q+ + S N G + P +N NL
Sbjct: 287 LQPP--MYSSIN------LQGMNSSSFIQQGHHQNSSNSANPFGTYHSTLSPRIQNVNLF 338
Query: 358 QGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAVGSSSSSVSTSLSNL 417
Q + LEP Q P+S+S +IGDF + F+D + GSSS+S+ ++ +N
Sbjct: 339 QRTSSPLEPLQFPRSKS--YIGDFKGLGD---RAIGGSFLDTCMPFGSSSTSLPSASTNP 393
Query: 418 MMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRCQESWQDAVQLSK 477
+MLQAN Q + G Q + N A ++ S F H SWQ + ++
Sbjct: 394 LMLQANYTQPLHIASDGIQPCIEGTPSNSASPNISFQGLSRFPGH-----SWQGNLNTTR 448
Query: 478 SSSISLPLGEPFILDQV 494
SLPL F+ DQV
Sbjct: 449 FPPSSLPLNLAFLPDQV 465
>gi|298103716|emb|CBM42559.1| putative B-type response regulator 13 [Populus x canadensis]
Length = 670
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/377 (45%), Positives = 239/377 (63%), Gaps = 25/377 (6%)
Query: 9 SSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRN 68
S++ GV D+FP G+RVL VDDD TCL ILEK LR C YEVT NRA AL +LRENRN
Sbjct: 2 STASSGGVSDQFPAGLRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIALSLLRENRN 61
Query: 69 NFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVR 128
+D+VISDV+MPDMDGFKLLEL+GLEMDLPV+M+SA +VMKG+ HGACDYL+KP+R
Sbjct: 62 GYDIVISDVHMPDMDGFKLLELIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPIR 121
Query: 129 MEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENEN--- 185
+E LKN WQHV+R++K + KD +S E R +K + D ++ +N
Sbjct: 122 IEALKNIWQHVVRKRKNEWKDLEQSGSVEEGGDRPQKQSEDADYSSSANEGSWKNSKRRK 181
Query: 186 -----------STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTREN 234
++T KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+LMNV GLTREN
Sbjct: 182 DEEEEADERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTREN 241
Query: 235 VASHLQKFRLSLKRL-GNKTLEAGMVAS-VGSKDSSYLRIGALDGFGGSHSVNSPGRLSS 292
VASHLQK+RL L+RL G ++GM S + ++++Y + +L+G ++ + G++ +
Sbjct: 242 VASHLQKYRLYLRRLSGVSQHQSGMGNSFISPQEATYGPLSSLNGL-DLQTLAAAGQIPA 300
Query: 293 SALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANR 352
+L++ G +GR + + M + + SF G+ QQ +
Sbjct: 301 QSLATLQAAG--LGRSTAKPRMPMPIVDQRNLF------SFENPKLRFGEGQQQHLNNGK 352
Query: 353 NSNLVQGVQTSLEPNQM 369
NL+ G+ T++EP Q+
Sbjct: 353 QINLLHGIPTTMEPKQL 369
>gi|298103714|emb|CBM42558.1| putative B-type response regulator 12 [Populus x canadensis]
Length = 690
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 170/385 (44%), Positives = 241/385 (62%), Gaps = 25/385 (6%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
M+ GG DG D+FP G+RVL VDDD TCL ILEK LR C+YEVT NRA AL
Sbjct: 11 MSTATSGGVWKASDGASDQFPAGLRVLVVDDDPTCLVILEKMLRTCRYEVTKCNRAEIAL 70
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+LREN+N +D+VISDV+MPDMDGFKLLE +GLEMDLPV+M+SA +VMKG+ HGAC
Sbjct: 71 SLLRENKNGYDIVISDVHMPDMDGFKLLEQIGLEMDLPVIMMSADDGKNVVMKGVTHGAC 130
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDG 180
DYL+KP+R+E LKN WQHV+R++K + +D +S E R++K + D ++
Sbjct: 131 DYLIKPIRIEALKNIWQHVVRKRKNEWRDLEQSGSVEEGGDRQQKQPEDADYSSSANEGS 190
Query: 181 HENEN--------------STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMN 226
+N ++ KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+LMN
Sbjct: 191 WKNSKRRKDEEEETEERDDTSALKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMN 250
Query: 227 VEGLTRENVASHLQKFRLSLKRL-GNKTLEAGMVAS-VGSKDSSYLRIGALDGFGGSHSV 284
V GLTRENVASHLQK+RL L+R+ G + GM ++ + ++++Y + +L+G ++
Sbjct: 251 VPGLTRENVASHLQKYRLYLRRVSGVSQHQNGMGSTFISPQEATYGPLSSLNGL-DLQTL 309
Query: 285 NSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQ 344
+ G+L + +L++ G +GR + + M + + SF G+ Q
Sbjct: 310 ATAGQLPAQSLATLQAAG--LGRSTAKPRMPMPIVDQRNLF------SFENPKLRFGEGQ 361
Query: 345 QAMFPANRNSNLVQGVQTSLEPNQM 369
Q + +NL+ G+ T++EP Q+
Sbjct: 362 QQHLNNGKQTNLLHGIPTTMEPKQL 386
>gi|224106962|ref|XP_002314325.1| type-b response regulator [Populus trichocarpa]
gi|222863365|gb|EEF00496.1| type-b response regulator [Populus trichocarpa]
Length = 634
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 172/377 (45%), Positives = 240/377 (63%), Gaps = 25/377 (6%)
Query: 9 SSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRN 68
S++ GV D+FP G+RVL VDDD TCL ILEK LR C YEVT NRA AL +LRENRN
Sbjct: 12 STASSGGVSDQFPAGLRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIALSLLRENRN 71
Query: 69 NFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVR 128
+D+VISDV+MPDMDGFKLLEL+GLEMDLPV+M+SA +VMKG+ HGACDYL+KP+R
Sbjct: 72 GYDIVISDVHMPDMDGFKLLELIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPIR 131
Query: 129 MEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENEN--- 185
+E LKN WQHV+R++K + KD +S E R++K + D ++ +N
Sbjct: 132 IEALKNIWQHVVRKRKNEWKDLEQSGSVEEGGDRQQKQSEDADYSSSANEGSWKNSKRRK 191
Query: 186 -----------STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTREN 234
++T KKPRVVW+ ELH +F+ AV+ LG+DKAVPKKIL+LMNV GLTREN
Sbjct: 192 DEEEEADERDDTSTLKKPRVVWSVELHQQFVAAVHQLGIDKAVPKKILELMNVPGLTREN 251
Query: 235 VASHLQKFRLSLKRL-GNKTLEAGMVAS-VGSKDSSYLRIGALDGFGGSHSVNSPGRLSS 292
VASHLQK+RL L+RL G ++GM S + ++++Y + +L+G ++ + G++ +
Sbjct: 252 VASHLQKYRLYLRRLSGVSQHQSGMGNSFINPQEATYGPLSSLNGL-DLQTLAAAGQIPA 310
Query: 293 SALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANR 352
+L++ G +GR + + M + + SF G+ QQ +
Sbjct: 311 QSLATLQAAG--LGRSTAKPRMPMPIVDQRNLF------SFENPKLRFGEGQQQHLNNGK 362
Query: 353 NSNLVQGVQTSLEPNQM 369
NL+ G+ T++EP Q+
Sbjct: 363 QINLLHGIPTTMEPKQL 379
>gi|356521815|ref|XP_003529546.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 679
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 179/386 (46%), Positives = 241/386 (62%), Gaps = 27/386 (6%)
Query: 14 DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLV 73
D V D+FP G+RVL VDDD TCL ILEK LR C YEVT NRA TAL +LREN+N FD+V
Sbjct: 23 DAVSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIV 82
Query: 74 ISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELK 133
ISDV+MPDMDGFKLLE +GLEMDLPV+M+SA +VMKG+ HGACDYL+KPVR+E LK
Sbjct: 83 ISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALK 142
Query: 134 NTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENEN-------- 185
N WQHV+R++K + KD +S E+ R+ K D D ++ N
Sbjct: 143 NIWQHVVRKRKNEWKDAEQS-GSAEEGDRQPKASDEADYSSSANEGSWRNSKKRRDEEEE 201
Query: 186 ------STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHL 239
++T KKPRVVW+ ELH +F+ AV+ LG+DKAVPKKIL+LMNV GLTRENVASHL
Sbjct: 202 AEDRDDTSTLKKPRVVWSVELHQQFVAAVDQLGIDKAVPKKILELMNVPGLTRENVASHL 261
Query: 240 QKFRLSLKRL-GNKTLEAGMVAS-VGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSS 297
QK+RL L+RL G + M S + +++++ I +++G ++ G+L + +L++
Sbjct: 262 QKYRLYLRRLSGVSQHQNNMNNSFLSPQEATFGTISSINGI-DLQTLAVAGQLPAQSLAT 320
Query: 298 SYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRNSNLV 357
G +GR AG+ M + + SF G+ QQ ++ NL+
Sbjct: 321 LQAAG--LGRPTGKAGVPMPLMDQRNLF------SFENPRLRFGEGQQQHLSTSKPMNLL 372
Query: 358 QGVQTSLEPNQMPQ-SESTTHIGDFN 382
G+ T++EP Q+ +ST IG N
Sbjct: 373 HGIPTNMEPKQLANLHQSTQSIGSLN 398
>gi|33330870|gb|AAQ10678.1| type-B response regulator [Catharanthus roseus]
Length = 643
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/412 (44%), Positives = 253/412 (61%), Gaps = 48/412 (11%)
Query: 11 SDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNF 70
S DGV D+FP G+RVL VDDD TCL+ILEK L+ C YEVT NRA ALK+LR+NRN +
Sbjct: 23 SGGDGVSDQFPAGLRVLVVDDDPTCLRILEKMLKNCLYEVTKCNRAEIALKLLRDNRNGY 82
Query: 71 DLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRME 130
D+VISDV+MPDMDGFKLLE VGLEMDLPV+M+SA +VMKG+ HGACDYL+KPVR+E
Sbjct: 83 DIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRIE 142
Query: 131 ELKNTWQHVIRRKKVDPKDQNRSPHEF-EKSYRKRKD-QDGEDE---DEDGDDDGHENEN 185
LKN WQHV+R+ K HE+ EK Y + +DGE + +ED D NE
Sbjct: 143 ALKNIWQHVVRKGK----------HEWKEKDYEQSGSVEDGERQQKPNEDVDYSSSANEG 192
Query: 186 --------------------STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLM 225
S+T KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+LM
Sbjct: 193 NWKNSKKRKDDEEDQEEKDDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELM 252
Query: 226 NVEGLTRENVASHLQKFRLSLKRL-GNKTLEAGMVAS-VGSKDSSYLRIGALDGFGGSHS 283
NV GLTRENVASHLQK+RL L+R+ G + G+ S +G+ D+++ + +++G +
Sbjct: 253 NVPGLTRENVASHLQKYRLYLRRVSGVSQHQNGLNNSFMGTPDATFGSMSSINGL-DFQA 311
Query: 284 VNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKN 343
+ + G++ + +L+S + + IGR S +SM + + SF G+
Sbjct: 312 LAATGQIPAQSLAS--LQAAAIGRPTSKPTISMPVVDQRNLF------SFEPHKLRFGEG 363
Query: 344 QQAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATG 395
QQ + + + +L+ G+ T++EP Q+ + F IN + A+ G
Sbjct: 364 QQQLNGSTKQISLLHGIPTNMEPKQLASLNQSAQT--FGGINMQVSSQASQG 413
>gi|356564542|ref|XP_003550512.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 677
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 175/386 (45%), Positives = 240/386 (62%), Gaps = 27/386 (6%)
Query: 14 DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLV 73
D V D+FP G+RVL VDDD TCL ILEK LR C YEVT NRA TAL +LREN+N FD+V
Sbjct: 23 DAVSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIV 82
Query: 74 ISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELK 133
ISDV+MPDMDGFKLLE +GLEMDLPV+M+SA +VMKG+ HGACDYL+KPVR+E LK
Sbjct: 83 ISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALK 142
Query: 134 NTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENEN-------- 185
N WQHV+R++K + KD +S E+ R K D D ++ N
Sbjct: 143 NIWQHVVRKRKNEWKDAEQS-GSAEEGDRHPKASDEADYSSSANEGSWRNSKKRRDEEEE 201
Query: 186 ------STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHL 239
++T KKPRVVW+ ELH +F+ AV+ LG+DKAVPKKIL+LMNV GLTRENVASHL
Sbjct: 202 AEDRDDTSTLKKPRVVWSVELHQQFVAAVDQLGIDKAVPKKILELMNVPGLTRENVASHL 261
Query: 240 QKFRLSLKRLGNKTLEAGMV--ASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSS 297
QK+RL L+RL + + + +G +++++ I +++G ++ G+L + +L++
Sbjct: 262 QKYRLYLRRLSGVSQHQNNLNNSFLGPQEATFGTISSINGI-DLQTLAVAGQLPAQSLAT 320
Query: 298 SYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRNSNLV 357
G +GR + AG+ + + + SF G+ Q ++ NL+
Sbjct: 321 LQAAG--LGRSTAKAGVPIPLMDQRNLF------SFENPRLRFGEGQPQHLSTSKPMNLL 372
Query: 358 QGVQTSLEPNQMPQ-SESTTHIGDFN 382
G+ T++EP Q+ +ST IG N
Sbjct: 373 HGIPTNMEPKQLANLHQSTQSIGGLN 398
>gi|255556280|ref|XP_002519174.1| sensor histidine kinase, putative [Ricinus communis]
gi|223541489|gb|EEF43038.1| sensor histidine kinase, putative [Ricinus communis]
Length = 682
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 179/389 (46%), Positives = 240/389 (61%), Gaps = 37/389 (9%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
V D+FP G+RVL VDDD TCL ILEK LR C YEVT NRA TAL +LREN+N +D+VIS
Sbjct: 25 VPDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGYDIVIS 84
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV+MPDMDGFKLLE +GLEMDLPV+M+SA +VMKG+ HGACDYL+KPVR+E LKN
Sbjct: 85 DVHMPDMDGFKLLEHIGLEMDLPVIMMSADEAKSVVMKGVTHGACDYLIKPVRIEALKNI 144
Query: 136 WQHVIRRKKVDPKD--QNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENEN-------- 185
WQHV+R+K+ + KD Q+ S E ++ ++ +D D +G+ +
Sbjct: 145 WQHVVRKKRNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWRNSKKRKDEEEEGDE 204
Query: 186 ---STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
++T KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+LMNV GLTRENVASHLQK+
Sbjct: 205 RDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKY 264
Query: 243 RLSLKRLGNKTLEAGMV--ASVGSKDSSYLRIGALDGFGGS--HSVNSPGRLSSSALSSS 298
RL L+RL + + A + ++++Y G L F G ++ + G+L + +L++
Sbjct: 265 RLYLRRLSGVSQHQNNLGNAFISPQEATY---GPLSSFNGIDLQTLAATGQLPAQSLATL 321
Query: 299 YVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQ----SFNTSFNTIGKNQQAMFPANRNS 354
+AGL + S M P + Q SF G+ QQ ++
Sbjct: 322 -----------QAAGLGRSAVKSR-MPIPIVDQRNLFSFENPKLRFGEGQQQQLNNSKQM 369
Query: 355 NLVQGVQTSLEPNQMPQ-SESTTHIGDFN 382
NL+ G+ TS+EP Q+ S IG N
Sbjct: 370 NLLHGIPTSMEPKQLANIHHSAQSIGSMN 398
>gi|449432892|ref|XP_004134232.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449503838|ref|XP_004162202.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 660
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 168/374 (44%), Positives = 234/374 (62%), Gaps = 33/374 (8%)
Query: 14 DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLV 73
+ V D+FP G+RVL VDDD TCL ILEK LR C+Y+VT +RA AL +LR+N+N FD+V
Sbjct: 14 EAVPDQFPAGLRVLVVDDDPTCLMILEKMLRICRYDVTNCSRAEDALSLLRQNKNGFDIV 73
Query: 74 ISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELK 133
+SDV+MPDMDGFKLLE +GLEMDLPV+M+S +VMKG+ HGACDYL+KPVRME LK
Sbjct: 74 LSDVHMPDMDGFKLLEYIGLEMDLPVIMMSVDDGKNVVMKGVTHGACDYLIKPVRMEALK 133
Query: 134 NTWQHVIRRKKVDPKD-QNRSPHEFEKSYRKRKDQDGEDEDEDGD-----------DDGH 181
N WQHV+R++K + KD + + ++ + +D D +G +D
Sbjct: 134 NIWQHVVRKRKNEWKDLEQTCVDDVDRQQKTNEDADYSSSANEGSWRNSKRRKDDVEDPE 193
Query: 182 ENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQK 241
E ++S+T KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+LMNV GLTRENVASHLQK
Sbjct: 194 ERDDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQK 253
Query: 242 FRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGS------HSVNSPGRLSSSAL 295
+RL L+RL +G+ + +++++ A D FG ++ + G+L +L
Sbjct: 254 YRLYLRRL------SGITQHQSNLNNTFM--SAQDAFGPPLNGLDLQTLAAAGQLQPQSL 305
Query: 296 SSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRNSN 355
++ G GR + +G+ M + I SF G QQ ++ N
Sbjct: 306 ATLQAAG--FGRSTAKSGMPMPLVDQRNHIF-----SFENPKLRFGDGQQPHLNGSKPMN 358
Query: 356 LVQGVQTSLEPNQM 369
L+ G+ T++EP Q+
Sbjct: 359 LLHGIPTTMEPKQL 372
>gi|302783917|ref|XP_002973731.1| type B response regulator [Selaginella moellendorffii]
gi|300158769|gb|EFJ25391.1| type B response regulator [Selaginella moellendorffii]
Length = 705
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/339 (50%), Positives = 220/339 (64%), Gaps = 40/339 (11%)
Query: 9 SSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRN 68
S+ DG D+FP+GMRVL VDDDQT L ILE LR C+Y VT +A TAL +LRE++N
Sbjct: 20 STVSTDGSKDQFPVGMRVLVVDDDQTTLTILEAMLRRCRYNVTTCGKATTALALLREHKN 79
Query: 69 NFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVR 128
+FDLVISDVYMPDMDGFKLLELVGLEMDLPV+M+S D VMKGI HGACDYLLKPVR
Sbjct: 80 DFDLVISDVYMPDMDGFKLLELVGLEMDLPVIMMSTDGDYNNVMKGITHGACDYLLKPVR 139
Query: 129 MEELKNTWQHVIRRKKVDPKD-QNRSPHEFEK---------------SYRKRKDQDGEDE 172
MEEL+N WQH++R++K + ++ + +P E +K +KRKD EDE
Sbjct: 140 MEELRNIWQHLVRKRKNEARETETLTPAEADKLKGGGGDDVEHLSSACSKKRKDVKEEDE 199
Query: 173 DEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTR 232
D H++E+ ++ KKPRVVW+ ELH +F+ AVN L +DKAVPKKIL+LM+V GLTR
Sbjct: 200 GVD-----HDSEDPSSLKKPRVVWSVELHQQFVNAVNKLNIDKAVPKKILELMDVPGLTR 254
Query: 233 ENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSS 292
ENVASHLQK+RL LKR +++ ++S+ G DG V G S
Sbjct: 255 ENVASHLQKYRLYLKR----------ISAQQPQNSAGFSFGGADG-----PVEGRGHGSF 299
Query: 293 SALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQ 331
S + V +IGR+ ++ L AS+ + + GL Q
Sbjct: 300 SLQAVPAVQQGVIGRIGTTNNLP----ASTALDQSGLLQ 334
>gi|359477139|ref|XP_002275142.2| PREDICTED: two-component response regulator ARR1-like [Vitis
vinifera]
Length = 681
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 200/475 (42%), Positives = 277/475 (58%), Gaps = 54/475 (11%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
M+ G+ D V D+FP G+RVL VDDD TCL ILEK LR C YEVT NRA TAL
Sbjct: 10 MSTASSSGAWKAGDVVPDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETAL 69
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+LR N++ FD+VISDV+MPDMDGFKLLE +GLEMDLPV+M+SA +VMKG+ HGAC
Sbjct: 70 SLLRGNKSGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKHVVMKGVTHGAC 129
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDG 180
DYL+KPVR+E LKN WQHV+R++K + KD +S E R++K + D ++
Sbjct: 130 DYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQS-GSVEDGDRQQKPSEDVDYSSSANEGN 188
Query: 181 HENEN--------------STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMN 226
+N ++T KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+LMN
Sbjct: 189 WKNSKRRKDEEDDAEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMN 248
Query: 227 VEGLTRENVASHLQKFRLSLKRL-GNKTLEAGMVAS-VGSKDSSYLRIGALDGFGGSHSV 284
V GLTRENVASHLQK+RL L+RL G + G+ S +G +++++ I +L+G ++
Sbjct: 249 VPGLTRENVASHLQKYRLYLRRLSGVSQHQNGLNNSFMGPQEATFGSISSLNGL-DLQTL 307
Query: 285 NSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKN- 343
G+L + +L++ G +GR +GL M + + SF G+
Sbjct: 308 AVAGQLPAQSLATLQAAG--LGRSTGKSGLPMPLVDQRNLF------SFEAPKFRYGEGQ 359
Query: 344 --QQAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARV 401
QQ + +++ NL+ G+ T++EP Q+ H S +F G I+ +V
Sbjct: 360 QQQQQLSNSSKQMNLLHGIPTTMEPKQL---------ATLRH--SAQSF----GSINMQV 404
Query: 402 -AVGSSSSSVSTSLSNLMMLQANPH-QAQS-RDAYGNQSSLTVASLNQAYFDLGV 453
A G+ SSS L+M A PH +AQ + GN S +S+ Q G+
Sbjct: 405 NAHGNDSSS-------LLMQMAQPHSRAQILNETTGNHVSRIASSMGQPVLSNGI 452
>gi|326488979|dbj|BAJ98101.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 684
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 200/287 (69%), Gaps = 25/287 (8%)
Query: 12 DEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFD 71
+E G D+FP+GM+VL VDDDQTCL +L++ L +C+Y+ T ++A AL MLRENR FD
Sbjct: 5 EEAGGGDQFPVGMKVLVVDDDQTCLAVLKRMLIQCRYDATTCSQATRALAMLRENRGAFD 64
Query: 72 LVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEE 131
++ISDV+MPDMDGF+LLELVGLEMDLPV+M+SA S T LVMKGI HGACDYL+KPVRMEE
Sbjct: 65 VIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDLVMKGIKHGACDYLIKPVRMEE 124
Query: 132 LKNTWQHVIRRK-----------KVDPKDQNRSP---HEF--------EKSYRKRKDQDG 169
LKN WQHV+R+K +D D+NR +E+ E S++ +K +
Sbjct: 125 LKNIWQHVVRKKFGGNKEHEHSGSLDDTDRNRPTNNDNEYASSANDGAEDSWKSQKKKRD 184
Query: 170 EDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEG 229
++ED+ + G + NS KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+LMNV G
Sbjct: 185 KEEDDSELESGDPSNNS---KKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPG 241
Query: 230 LTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALD 276
LTRENVASHLQKFRL LKR+ G V + + +G LD
Sbjct: 242 LTRENVASHLQKFRLYLKRIAQHHAGMGNPYGVPASSAQVASLGGLD 288
>gi|313184318|emb|CBL94183.1| putative type-b response regulator (sensor histidine kinase) [Malus
x domestica]
Length = 674
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/385 (44%), Positives = 238/385 (61%), Gaps = 27/385 (7%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
M+ G+ D V D+FP G+RVL VDDD TCL ILE+ LR C YEVT NRA AL
Sbjct: 10 MSTASSSGAWKSGDVVTDQFPAGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEIAL 69
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+LREN+N FD+VISDV+MPDMDGFKLLE VGLEMDLPV+M+SA +VMKG+ HGAC
Sbjct: 70 SLLRENKNGFDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDGQSVVMKGVTHGAC 129
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDG 180
DYL+KPVR+E LKN WQHV+R+KK + KD +S E+ R++K + D ++
Sbjct: 130 DYLIKPVRIEALKNIWQHVVRKKKNEWKDVEQS-GSVEEGDRQQKPSEDADYSSSANEGT 188
Query: 181 HENEN--------------STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMN 226
+N S+T KKPRVVW+ ELH +F+GAVN LG+DKAVPKKIL+LMN
Sbjct: 189 WKNSKRRKDEEEETDERDDSSTLKKPRVVWSVELHQQFVGAVNQLGIDKAVPKKILELMN 248
Query: 227 VEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVAS--VGSKDSSYLRIGALDGFGGSHSV 284
V GLTRENVASHLQK+RL L+RL + + + + +++S+ + +L G ++
Sbjct: 249 VPGLTRENVASHLQKYRLYLRRLSGVSQHQNNLGNSFMSPQEASFGAMSSLSGL-DLQTL 307
Query: 285 NSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQ 344
G+L + +L++ G +GR +G+ M + + SF + Q
Sbjct: 308 AVTGQLPAQSLATLQAAG--LGRSTIKSGVPMPLVDQRNLF------SFENPKLRFAEGQ 359
Query: 345 QAMFPANRNSNLVQGVQTSLEPNQM 369
+ +++ NL+ G+ T++E Q+
Sbjct: 360 HHL-SSSKPMNLLHGIPTTMEAKQL 383
>gi|449464732|ref|XP_004150083.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449501499|ref|XP_004161384.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 673
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/378 (46%), Positives = 236/378 (62%), Gaps = 47/378 (12%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDD TCLKILEK L+ C Y VT NRA AL MLREN+N FD+V+SDV
Sbjct: 31 DQFPAGLRVLVVDDDPTCLKILEKMLQNCCYAVTKCNRAEIALSMLRENKNGFDIVLSDV 90
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+MPDMDGFKLLE VGLEMDLPV+M+SA +VMKG+ HGACDYL+KPVR+E L+N WQ
Sbjct: 91 HMPDMDGFKLLEQVGLEMDLPVIMMSADDGKNVVMKGVIHGACDYLIKPVRIEALRNLWQ 150
Query: 138 HVIRRKKVDPKD-------------------QNRSPHEFEKSYR-KRKDQDGEDEDEDGD 177
HV+R++K + KD N S +E S+ ++ +D E+E E+ D
Sbjct: 151 HVVRKRKTEWKDLEQSGSVDEGDREQNLSEGANYSSSAYEGSWNSSKRRRDAEEEPEERD 210
Query: 178 DDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVAS 237
D ++T KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+LMNV GLTRENVAS
Sbjct: 211 D-------TSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVAS 263
Query: 238 HLQKFRLSLKRL-GNKTLEAGMVAS-VGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSAL 295
HLQK+RL L+RL G ++ + S + +D + +G+ +G +++ G+LS +L
Sbjct: 264 HLQKYRLYLRRLSGVSPHQSNLNNSFINPQDPPFGSMGSFNGI-DLQTLSVTGQLSPQSL 322
Query: 296 SSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNT----IGKNQQAMFPAN 351
++ G + R + +G+SM L Q+ SF ++Q +
Sbjct: 323 AALQATG--LRRPTAKSGISM-----------ALDQNNIFSFENPKLRFVEDQTQHLNNS 369
Query: 352 RNSNLVQGVQTSLEPNQM 369
+ NL G+ T +EP Q+
Sbjct: 370 KPVNLFHGIPTKMEPKQL 387
>gi|296083291|emb|CBI22927.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 176/388 (45%), Positives = 243/388 (62%), Gaps = 29/388 (7%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
M+ G+ D V D+FP G+RVL VDDD TCL ILEK LR C YEVT NRA TAL
Sbjct: 10 MSTASSSGAWKAGDVVPDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETAL 69
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+LR N++ FD+VISDV+MPDMDGFKLLE +GLEMDLPV+M+SA +VMKG+ HGAC
Sbjct: 70 SLLRGNKSGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKHVVMKGVTHGAC 129
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDG 180
DYL+KPVR+E LKN WQHV+R++K + KD +S E R++K + D ++
Sbjct: 130 DYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQS-GSVEDGDRQQKPSEDVDYSSSANEGN 188
Query: 181 HENEN--------------STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMN 226
+N ++T KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+LMN
Sbjct: 189 WKNSKRRKDEEDDAEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMN 248
Query: 227 VEGLTRENVASHLQKFRLSLKRL-GNKTLEAGMVAS-VGSKDSSYLRIGALDGFGGSHSV 284
V GLTRENVASHLQK+RL L+RL G + G+ S +G +++++ I +L+G ++
Sbjct: 249 VPGLTRENVASHLQKYRLYLRRLSGVSQHQNGLNNSFMGPQEATFGSISSLNGL-DLQTL 307
Query: 285 NSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKN- 343
G+L + +L++ G +GR +GL M + + SF G+
Sbjct: 308 AVAGQLPAQSLATLQAAG--LGRSTGKSGLPMPLVDQRNLF------SFEAPKFRYGEGQ 359
Query: 344 --QQAMFPANRNSNLVQGVQTSLEPNQM 369
QQ + +++ NL+ G+ T++EP Q+
Sbjct: 360 QQQQQLSNSSKQMNLLHGIPTTMEPKQL 387
>gi|343407542|gb|AEM23772.1| RRB2 type-b response regulator [Nicotiana tabacum]
Length = 669
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/375 (46%), Positives = 233/375 (62%), Gaps = 37/375 (9%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
++FP G+RVL VDDD TCL+ILEK L C YEVT +NRA +AL +LRENRN FD+VISDV
Sbjct: 27 NQFPAGLRVLVVDDDPTCLRILEKMLWNCHYEVTKSNRAESALSLLRENRNGFDIVISDV 86
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+MPDMDGFKLLE VGLEMDLPV+M+SA +VMKG+ HGACDYL+KPVR+E LKN WQ
Sbjct: 87 HMPDMDGFKLLEHVGLEMDLPVIMMSADDSKDVVMKGVTHGACDYLIKPVRIEALKNIWQ 146
Query: 138 HVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENEN------------ 185
HVIR+KK + KD+ +F++S + ED D NE
Sbjct: 147 HVIRKKKHEWKDK-----DFDQSATAEAGDRQQKPPEDVDYSSSANEGGNWKSSKRRKEE 201
Query: 186 ---------STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVA 236
S++ KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+LMNV GLTRENVA
Sbjct: 202 EDETEERDDSSSLKKPRVVWSVELHQQFVQAVNQLGIDKAVPKKILELMNVPGLTRENVA 261
Query: 237 SHLQKFRLSLKRL-GNKTLEAGMVAS-VGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSA 294
SHLQK+RL L+RL G G+ S +G +S+ + G ++ + +L + +
Sbjct: 262 SHLQKYRLYLRRLSGVSQHPNGLNNSFMGHPESNIWNVFFSMGL-SFQALAATSQLPAQS 320
Query: 295 LSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRNS 354
L++ + + +GR + A +SM + + SF + QQ + +N+
Sbjct: 321 LAT--LQAAALGRSATKAAISMPLVDQRNLF------SFENPKLRFPEGQQQLNNSNKQI 372
Query: 355 NLVQGVQTSLEPNQM 369
NL+ G+ T++EP Q+
Sbjct: 373 NLLHGIPTTMEPKQL 387
>gi|357480195|ref|XP_003610383.1| Two-component response regulator EHD1 [Medicago truncatula]
gi|355511438|gb|AES92580.1| Two-component response regulator EHD1 [Medicago truncatula]
Length = 597
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 205/503 (40%), Positives = 288/503 (57%), Gaps = 80/503 (15%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP GMRVLAVDDD T LK+LEK L C Y VT T + + AL++LRE ++ FDLVISDV M
Sbjct: 20 FPAGMRVLAVDDDPTYLKVLEKQLLTCNYNVTTTTKPVEALELLREKKDMFDLVISDVSM 79
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGFKLLE VGLEMDLP +MLS D + VMK + HGAC+YL+KP+RMEELK+ WQHV
Sbjct: 80 PDMDGFKLLEQVGLEMDLPFIMLSVNDDIEKVMKSVIHGACNYLVKPIRMEELKSIWQHV 139
Query: 140 IRRKKVDPKDQNRS----------------PHEFEKSYRKRKDQDGEDEDEDGDDDGHEN 183
+ RKK++ KDQN+ ++ + RKRK+Q E+E E +D
Sbjct: 140 V-RKKIESKDQNQGIISDGVYGQDTSSENIANKNKMHGRKRKEQTEEEEAEQDND----- 193
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLGLD-------KAVPKKILDLMNVEGLTRENVA 236
E +T+KKPR+VW ELH KF+ AVN +GLD +A PKKILDLMNVEGLTRENV+
Sbjct: 194 EKCSTRKKPRLVWDHELHRKFVSAVNHVGLDISSTVIAEASPKKILDLMNVEGLTRENVS 253
Query: 237 SHLQKFRLSLKRL-----GNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLS 291
SHLQ++R+ +K L G+ L+ Y + G++ G+G +++ R+
Sbjct: 254 SHLQRYRIDIKWLSKQDRGDDALDP------------YQQKGSVGGYGDFCTLSGSTRVL 301
Query: 292 SSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPAN 351
SS L +Y M RLN+ + L++ G++SS ++ P QS N I + MF +
Sbjct: 302 SSIL-PAYASNDMFCRLNAPSSLNLEGMSSSALVPP--LQSHN-----IPNFETPMFSES 353
Query: 352 RNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAVGSSSSSVS 411
+S+ V G+QTS++ NQ Q+ + + I+ A T ++ F D +G++ ++ +
Sbjct: 354 ESSSSVHGIQTSMDINQFQQNIYLPDNINLSPIDDSNAVTDSSSFQD----IGATVNNAN 409
Query: 412 TSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGRCQESWQD 471
SLS + +N Q A+ N S + A++ F+ SSNF
Sbjct: 410 VSLS---CISSNHIQTHKSGAFINHSHVEGAAVKTQSFNPVTSGSSNF------------ 454
Query: 472 AVQLSKSSSISLPLGEPFILDQV 494
+S S+PL E F DQ+
Sbjct: 455 -------ASNSVPLSEDFNNDQM 470
>gi|242041701|ref|XP_002468245.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
gi|241922099|gb|EER95243.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
Length = 686
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 153/268 (57%), Positives = 187/268 (69%), Gaps = 31/268 (11%)
Query: 2 TAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALK 61
AE +GG +FP+GM+VL VDDD TCL +L++ L +C+Y+VT +A AL
Sbjct: 3 AAEARGG----------EFPVGMKVLVVDDDPTCLLVLKRMLLDCRYDVTTCPQATRALT 52
Query: 62 MLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACD 121
MLRENR FD++ISDV+MPDMDGF+LLELVGLEMDLPV+M+SA S T +VMKGI HGACD
Sbjct: 53 MLRENRRGFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACD 112
Query: 122 YLLKPVRMEELKNTWQHVIRRK-----------KVDPKDQNRSPHEFEKSYRKR------ 164
YL+KPVRMEELKN WQHV+R+K +D D+NR P + Y
Sbjct: 113 YLIKPVRMEELKNIWQHVVRKKFNENKDHEHSGSLDDTDRNR-PTNNDNEYASSANDGGD 171
Query: 165 ---KDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKI 221
K Q + E ED + D + S+T KKPRVVW+ ELH +F+ AVN LG+DKAVPKKI
Sbjct: 172 GSWKSQKKKREKEDDETDLENGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKI 231
Query: 222 LDLMNVEGLTRENVASHLQKFRLSLKRL 249
L+LMNV GLTRENVASHLQKFRL LKR+
Sbjct: 232 LELMNVPGLTRENVASHLQKFRLYLKRI 259
>gi|356556050|ref|XP_003546340.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 672
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 181/415 (43%), Positives = 243/415 (58%), Gaps = 53/415 (12%)
Query: 6 KGGSSSDE----DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALK 61
KG +SS D V D+FP G+RVL VDDD TCL ILE+ LR C YEVT RA AL
Sbjct: 7 KGSTSSSPLKAGDSVSDQFPAGLRVLVVDDDPTCLMILERMLRACLYEVTKCQRAEVALS 66
Query: 62 MLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACD 121
+LREN+N FD+V+SDV+MPDMDGFKLLE +GLEMDLPV+M+SA +VMKG+ HGACD
Sbjct: 67 LLRENKNGFDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKHVVMKGVTHGACD 126
Query: 122 YLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGH 181
YL+KPVR+E LKN WQHVIR++K +D E+S + +DGD
Sbjct: 127 YLIKPVRIEALKNIWQHVIRKRKNGLRD-------VEQSGSVEEGDQPPKVSDDGDYSSS 179
Query: 182 ENE------------------NSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILD 223
NE +S+T KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+
Sbjct: 180 VNEARSSKKRRDEDEEGDEKDDSSTLKKPRVVWSVELHQQFMAAVNQLGIDKAVPKKILE 239
Query: 224 LMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGS-- 281
LMNV GLTRENVASHLQK+RL L+RL +G+ G+ ++S++ FGG+
Sbjct: 240 LMNVPGLTRENVASHLQKYRLYLRRL------SGVSQQQGNLNNSFMSSQEAT-FGGTSI 292
Query: 282 -----HSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTS 336
++++ G+ S +L+ G +GR + AG+ M + SF
Sbjct: 293 NGIDLQTLSAAGQFPSQSLAKLQATG--LGRTTAKAGVPMPLSDQKNLF------SFENP 344
Query: 337 FNTIGKNQQAMFPANRNSNLVQGVQTSLEPNQMPQ-SESTTHIGDFN-HINSPTA 389
G+ ++ NL+ G+ T++EP Q+ +ST +G N +N+P
Sbjct: 345 RLRFGEGSLQHLSNSKPINLLHGIPTNMEPKQLANLHQSTQPLGSLNMRVNAPVT 399
>gi|223942343|gb|ACN25255.1| unknown [Zea mays]
gi|323388571|gb|ADX60090.1| ARR-B family member [Zea mays]
gi|323388695|gb|ADX60152.1| ARR-B transcription factor [Zea mays]
gi|413956503|gb|AFW89152.1| putative two-component response regulator family protein isoform 1
[Zea mays]
gi|413956504|gb|AFW89153.1| putative two-component response regulator family protein isoform 2
[Zea mays]
Length = 686
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 165/318 (51%), Positives = 211/318 (66%), Gaps = 31/318 (9%)
Query: 19 KFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
+FP+GM+VL VDDD TCL +L++ L EC+Y+VT +A AL MLRENR FD++ISDV+
Sbjct: 10 EFPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVH 69
Query: 79 MPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
MPDMDGF+LLELVGLEMDLPV+M+SA S T +VM GI HGACDYL+KPVRMEELKN WQH
Sbjct: 70 MPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMNGIKHGACDYLIKPVRMEELKNIWQH 129
Query: 139 VIRRK-----------KVDPKDQNRSPHEFEKSYRKR---------KDQDGEDEDEDGDD 178
VIR+K +D D+NR P + Y K Q + E ED +
Sbjct: 130 VIRKKFNENKDHEHSGSLDDTDRNR-PTNNDNEYASSANDGGDGSWKSQRKKREKEDDET 188
Query: 179 DGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASH 238
D + S+T KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+LMNV GLTRENVASH
Sbjct: 189 DLENGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASH 248
Query: 239 LQKFRLSLKRLG--NKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALS 296
LQKFRL LKR+ + + VA V S + + L G L+ ++ + G++ AL+
Sbjct: 249 LQKFRLYLKRIAQHHAGIPHPFVAPVSSANVAPL--GGLE----FQALAASGQIPPQALA 302
Query: 297 SSYVPGSMIGRLNSSAGL 314
+ + ++GR SS L
Sbjct: 303 A--LQDELLGRPTSSLAL 318
>gi|162460694|ref|NP_001104864.1| response regulator 10 [Zea mays]
gi|15667625|dbj|BAB68269.1| response regulator 10 [Zea mays]
Length = 686
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 168/335 (50%), Positives = 216/335 (64%), Gaps = 41/335 (12%)
Query: 2 TAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALK 61
AE +GG +FP+GM+VL VDDD TCL +L++ L EC+Y+VT +A AL
Sbjct: 3 AAEARGG----------EFPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALT 52
Query: 62 MLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACD 121
MLRENR FD++ISDV+MPDMDGF+LLELVGLEMDLPV+M+SA S T +VM G+ HGACD
Sbjct: 53 MLRENRRGFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMNGVKHGACD 112
Query: 122 YLLKPVRMEELKNTWQHVIRRK-----------KVDPKDQNRSPHEFEKSYRKR------ 164
YL+KPVRMEELKN WQHVIR+K +D D+NR P + Y
Sbjct: 113 YLIKPVRMEELKNIWQHVIRKKFNENKDHEHSGSLDDTDRNR-PTNNDNEYASSANDGGD 171
Query: 165 ---KDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKI 221
K Q + E ED + D + S+T KKPRVVW+ ELH +F+ AVN LG+DKAVPKKI
Sbjct: 172 GSWKSQRKKREKEDDETDLENGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKI 231
Query: 222 LDLMNVEGLTRENVASHLQKFRLSLKRLG--NKTLEAGMVASVGSKDSSYLRIGALDGFG 279
L+LMNV GLTRENVASHLQKFRL LKR+ + + VA V S + + L G L+
Sbjct: 232 LELMNVPGLTRENVASHLQKFRLYLKRIAQHHAGIPHPFVAPVSSANVAPL--GGLE--- 286
Query: 280 GSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGL 314
++ + G++ AL++ + ++GR SS L
Sbjct: 287 -FQALAASGQIPPQALAA--LQDELLGRPTSSLAL 318
>gi|356529278|ref|XP_003533222.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 673
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 180/410 (43%), Positives = 246/410 (60%), Gaps = 47/410 (11%)
Query: 6 KGGSSSDE----DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALK 61
KG +SS D V D+FP G+RVL VDDD TCL ILE+ LR C YEVT RA AL
Sbjct: 7 KGSTSSSPLKAGDTVSDQFPAGLRVLVVDDDPTCLMILERMLRACLYEVTKCKRAEVALS 66
Query: 62 MLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACD 121
+LREN+N FD+V+SDV+MPDMDGFKLLE +GLEMDLPV+M+SA ++VMKG+ HGACD
Sbjct: 67 LLRENKNGFDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKQVVMKGVTHGACD 126
Query: 122 YLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGH 181
YL+KPVR+E LKN WQHV+R +K +D +S E+ R K D DG+
Sbjct: 127 YLIKPVRIEALKNIWQHVVRMRKNGLRDVEQS-GSMEEGDRPPKGSD------DGNYSSS 179
Query: 182 ENE------------------NSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILD 223
NE +S+T KKPRVVW+ ELH +F+ VN LG+DKAVPKKIL+
Sbjct: 180 VNEAKSSKKRRDEDEEGDERDDSSTLKKPRVVWSVELHQQFMAVVNQLGIDKAVPKKILE 239
Query: 224 LMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVAS--VGSKDSSY--LRIGALDGFG 279
LMNV GLTRENVASHLQK+RL L+RL + + G +++ + S+++++ I +D
Sbjct: 240 LMNVPGLTRENVASHLQKYRLYLRRLSGVSQQQGNLSNSFMSSQEATFGGTSINGID--- 296
Query: 280 GSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNT 339
++++ G+ S +L+ G +GR + AG+ M + SF
Sbjct: 297 -LQTLSAAGQFPSQSLAKFQAAG--LGRTTAKAGMPMSLSDQKNLF------SFENPRLR 347
Query: 340 IGKNQQAMFPANRNSNLVQGVQTSLEPNQMPQ-SESTTHIGDFN-HINSP 387
G+ ++ NL+ G+ T++EP Q+ +ST +G N +NSP
Sbjct: 348 FGEGSLQHLSNSKPINLLHGILTNMEPKQLANLHQSTQPLGSLNMRVNSP 397
>gi|162460014|ref|NP_001104861.1| response regulator 8 [Zea mays]
gi|13661174|dbj|BAB41137.1| response regulator 8 [Zea mays]
gi|195656391|gb|ACG47663.1| two-component response regulator ARR1 [Zea mays]
Length = 684
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 164/315 (52%), Positives = 210/315 (66%), Gaps = 28/315 (8%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP+GM+VL VDDD TCL +L++ L EC+Y+VT +A AL MLRENR FD++ISDV+M
Sbjct: 11 FPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHM 70
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGF+LLELVGLEMDLPV+M+SA S T +VMKGI HGACDYL+KPVRMEELKN WQHV
Sbjct: 71 PDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHV 130
Query: 140 IRRK-----------KVDPKDQNRSPHEFEKSYRKR---------KDQDGEDEDEDGDDD 179
+R+K +D D+NR P + Y K Q + E ED D+
Sbjct: 131 VRKKFNGNKDHEHSGSLDDTDRNR-PTNNDNEYASSANDGGDGSWKSQKKKREKED-DET 188
Query: 180 GHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHL 239
E+ + +T KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+LMNV GLTRENVASHL
Sbjct: 189 DLESGDPSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASHL 248
Query: 240 QKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSY 299
QKFRL LKR+ AG+ + SS ++ L G ++ + G++ AL++
Sbjct: 249 QKFRLYLKRIAQH--HAGIPHPFVASASSA-KVAPLGGL-EFQALAASGQIPPQALAA-- 302
Query: 300 VPGSMIGRLNSSAGL 314
+ ++GR SS L
Sbjct: 303 LQDELLGRPTSSLAL 317
>gi|414865594|tpg|DAA44151.1| TPA: putative two-component response regulator family protein
isoform 1 [Zea mays]
gi|414865595|tpg|DAA44152.1| TPA: putative two-component response regulator family protein
isoform 2 [Zea mays]
gi|414865596|tpg|DAA44153.1| TPA: putative two-component response regulator family protein
isoform 3 [Zea mays]
Length = 684
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 164/315 (52%), Positives = 210/315 (66%), Gaps = 28/315 (8%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP+GM+VL VDDD TCL +L++ L EC+Y+VT +A AL MLRENR FD++ISDV+M
Sbjct: 11 FPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHM 70
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGF+LLELVGLEMDLPV+M+SA S T +VMKGI HGACDYL+KPVRMEELKN WQHV
Sbjct: 71 PDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHV 130
Query: 140 IRRK-----------KVDPKDQNRSPHEFEKSYRKR---------KDQDGEDEDEDGDDD 179
+R+K +D D+NR P + Y K Q + E ED D+
Sbjct: 131 VRKKFNGNKDHEHSGSLDDTDRNR-PTNNDNEYASSANDGGDGSWKSQKKKREKED-DET 188
Query: 180 GHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHL 239
E+ + +T KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+LMNV GLTRENVASHL
Sbjct: 189 DLESGDPSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASHL 248
Query: 240 QKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSY 299
QKFRL LKR+ AG+ + SS ++ L G ++ + G++ AL++
Sbjct: 249 QKFRLYLKRIAQH--HAGIPHPFVASASSA-KVAPLGGL-EFQALAASGQIPPQALAA-- 302
Query: 300 VPGSMIGRLNSSAGL 314
+ ++GR SS L
Sbjct: 303 LQDELLGRPTSSLAL 317
>gi|297804596|ref|XP_002870182.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
gi|297316018|gb|EFH46441.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
Length = 676
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/390 (44%), Positives = 234/390 (60%), Gaps = 46/390 (11%)
Query: 7 GGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLREN 66
GGS+SD FP +RVL VDDD TCL ILE+ L C Y VT NRA AL +LR+N
Sbjct: 17 GGSNSD------PFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAEIALSLLRKN 70
Query: 67 RNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKP 126
+N FD+VISDV+MPDMDGFKLLE VGLEMDLPV+M+SA +V+KG+ HGA DYL+KP
Sbjct: 71 KNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKP 130
Query: 127 VRMEELKNTWQHVIRRKKVDPKDQNRSPH-----EFEKSYRKRKDQDGEDED-------- 173
VR+E LKN WQHV+R+K+ D N S H E R R+ Q ED D
Sbjct: 131 VRIEALKNIWQHVVRKKR---NDWNVSEHSGGSIEDTGGDRDRQQQQREDADNNSSSINE 187
Query: 174 -----------EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKIL 222
E+ D+ G + E++++ KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL
Sbjct: 188 GNWRSSRKRKEEEVDEQGDDKEDTSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKIL 247
Query: 223 DLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMV--ASVGSKDSSYLRIGALDGFGG 280
++MNV GLTRENVASHLQK+R+ L+RLG + G + + + +D S+ + +L+GF
Sbjct: 248 EMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQSFGHLSSLNGF-- 305
Query: 281 SHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTI 340
+ G+L + +L+ G +GR L+ G++ S ++ +F
Sbjct: 306 --DLAVAGQLPAQSLAQFQAAG--LGR----PTLTKPGLSVSPLVDQRTIFNFENPKIRF 357
Query: 341 GKNQQAMF-PANRNSNLVQGVQTSLEPNQM 369
G M N+ NL+ GV T +EP Q
Sbjct: 358 GDGHGPMMNNGNKQMNLLHGVPTGMEPKQF 387
>gi|115451653|ref|NP_001049427.1| Os03g0224200 [Oryza sativa Japonica Group]
gi|24308616|gb|AAN52739.1| Putative response regulator 10 [Oryza sativa Japonica Group]
gi|108706930|gb|ABF94725.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|108706931|gb|ABF94726.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|108706932|gb|ABF94727.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|110331747|dbj|BAE97711.1| B-type response regulator [Oryza sativa Japonica Group]
gi|113547898|dbj|BAF11341.1| Os03g0224200 [Oryza sativa Japonica Group]
gi|118790738|tpd|FAA00254.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|125585452|gb|EAZ26116.1| hypothetical protein OsJ_09978 [Oryza sativa Japonica Group]
gi|215767224|dbj|BAG99452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767240|dbj|BAG99468.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 691
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 156/287 (54%), Positives = 197/287 (68%), Gaps = 26/287 (9%)
Query: 13 EDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDL 72
EDG +FP+GM+VL VDDD TCL +L++ L EC+Y+ T ++A AL MLRENR FD+
Sbjct: 5 EDGGGVEFPVGMKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFDV 64
Query: 73 VISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEEL 132
+ISDV+MPDMDGF+LLELVGLEMDLPV+M+SA S T +VMKGI HGACDYL+KPVRMEEL
Sbjct: 65 IISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEEL 124
Query: 133 KNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHE---------- 182
KN WQHVIR+K + K+ S + + R R + ++E +DG E
Sbjct: 125 KNIWQHVIRKKFNENKEHEHS-GSLDDTDRTRPTNN-DNEYASSANDGAEGSWKSQKKKR 182
Query: 183 -----------NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLT 231
+ S+T KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+LMNV GLT
Sbjct: 183 DKDDDDGELESGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLT 242
Query: 232 RENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGF 278
RENVASHLQKFRL LKR+ AG +A+ +S ++G+L G
Sbjct: 243 RENVASHLQKFRLYLKRIAQH--HAG-IANPFCPPASSGKVGSLGGL 286
>gi|298103718|emb|CBM42560.1| putative B-type response regulator 15 [Populus x canadensis]
Length = 671
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 148/262 (56%), Positives = 185/262 (70%), Gaps = 20/262 (7%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
V D+FP G+RVL VDDD TCL++LEK R C Y VT ++A ALK+LRE + FD+V+S
Sbjct: 30 VSDQFPAGLRVLVVDDDITCLRLLEKMPRRCLYHVTTCSQATAALKLLRERKGCFDVVLS 89
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV+MPDMDGFKLLELVGLEMDLPV+M+SA T VM+GI+HGACDYL+KP+R EELKN
Sbjct: 90 DVHMPDMDGFKLLELVGLEMDLPVIMMSADGRTSAVMRGISHGACDYLIKPIREEELKNI 149
Query: 136 WQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDED-------------------EDG 176
WQHVIR+K + K+Q S FE + R ++ D E+ +D
Sbjct: 150 WQHVIRKKWNENKEQEHS-GSFEDNDRHKRGNDAENASSVSEGAEGVLKGQKKRSIAKDE 208
Query: 177 DDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVA 236
DD EN++ + +KPRVVW+ ELH +F+ AVN LG+DKAVPK+IL+LMNV GLTRENVA
Sbjct: 209 DDAELENDDPSASRKPRVVWSVELHQQFVSAVNHLGIDKAVPKRILELMNVPGLTRENVA 268
Query: 237 SHLQKFRLSLKRLGNKTLEAGM 258
SHLQKFRL LKRL + G+
Sbjct: 269 SHLQKFRLYLKRLSGVAQQGGI 290
>gi|343407540|gb|AEM23771.1| RRB1 type-b response regulator [Nicotiana tabacum]
Length = 654
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 158/350 (45%), Positives = 224/350 (64%), Gaps = 25/350 (7%)
Query: 3 AEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKM 62
A G ++ + D FP+G+RVL VDDD CL+ILE+ LR+C+Y VT +A AL +
Sbjct: 2 ASMSGDGATCKSEATDTFPVGLRVLVVDDDIVCLRILEQMLRKCKYSVTTCTQATVALNL 61
Query: 63 LRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDY 122
LRE R +FD+V+SDV+MPDMDGFKLLELVGLEMDLP++M+S T LVM+G+ HGACDY
Sbjct: 62 LRERRGSFDVVLSDVHMPDMDGFKLLELVGLEMDLPIIMMSGDGRTNLVMRGVQHGACDY 121
Query: 123 LLKPVRMEELKNTWQHVIRRK-----------KVDPKDQNRSPHE--------FEKSYRK 163
L+KP+R EELKN WQHV+R+K +D D+++ ++ E + R
Sbjct: 122 LIKPIRDEELKNIWQHVVRKKCSFSKEPEYSGSLDDNDRHKRGNDDAECASSVIEGADRV 181
Query: 164 RKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILD 223
K Q + + ++ D+ EN++ TT KKPRVVW+ ELH +F+ AVN LG+DKAVPK+IL+
Sbjct: 182 LKPQKKKRDAKEEDETEMENDDPTTAKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE 241
Query: 224 LMNVEGLTRENVASHLQKFRLSLKRL-GNKTLEAGMVASVGSKDSSYLRIGALDGFGGSH 282
LMNV GLTRENVASHLQKFRL LKRL G + G ++ ++G+L F
Sbjct: 242 LMNVPGLTRENVASHLQKFRLYLKRLSGVAQQQGGFPSTYCGPIEQNPKLGSLGRF-DIQ 300
Query: 283 SVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQS 332
++ + G++ L++ + ++GR SS L + + +++ L Q+
Sbjct: 301 ALAASGQIPPETLTALH--AELLGR--SSGNLVLPSVEQPDLLQASLQQA 346
>gi|125542952|gb|EAY89091.1| hypothetical protein OsI_10579 [Oryza sativa Indica Group]
Length = 691
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 156/287 (54%), Positives = 197/287 (68%), Gaps = 26/287 (9%)
Query: 13 EDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDL 72
EDG +FP+GM+VL VDDD TCL +L++ L EC+Y+ T ++A AL MLRENR FD+
Sbjct: 5 EDGGGVEFPVGMKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFDV 64
Query: 73 VISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEEL 132
+ISDV+MPDMDGF+LLELVGLEMDLPV+M+SA S T +VMKGI HGACDYL+KPVRMEEL
Sbjct: 65 IISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEEL 124
Query: 133 KNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHE---------- 182
KN WQHVIR+K + K+ S + + R R + ++E +DG E
Sbjct: 125 KNIWQHVIRKKFNENKEHEHS-GSLDDTDRTRPTNN-DNEYASSANDGAEGSWKSQKKKR 182
Query: 183 -----------NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLT 231
+ S+T KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+LMNV GLT
Sbjct: 183 DKDDDDGELESGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLT 242
Query: 232 RENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGF 278
RENVASHLQKFRL LKR+ AG +A+ +S ++G+L G
Sbjct: 243 RENVASHLQKFRLYLKRIAQH--HAG-IANPFCPPASSGKVGSLGGL 286
>gi|359472591|ref|XP_002281291.2| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 643
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 166/345 (48%), Positives = 216/345 (62%), Gaps = 37/345 (10%)
Query: 8 GSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENR 67
GS + V D+FP G+RVL VDDD TCLKILE+ LR C Y VT ++A AL +LRE +
Sbjct: 17 GSCKADVVVSDQFPAGLRVLVVDDDVTCLKILEQMLRRCLYHVTTCSQATIALNILREKK 76
Query: 68 NNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPV 127
FD+V+SDV+MPDMDG+KLLE VGLEMDLPV+M+SA T VM+GI HGACDYL+KP+
Sbjct: 77 GCFDIVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPI 136
Query: 128 RMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGE-----DEDEDG------ 176
R EELKN WQHV+R+K + K+ S + KR +D E +E +G
Sbjct: 137 REEELKNIWQHVVRKKWNENKEHEHSGSLEDNDRHKRGGEDAEYASSVNEGAEGILKGQK 196
Query: 177 -------DDDGH-ENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVE 228
+DDG ENE+ +T KKPRVVW+ ELH +F+ AVN LG+DKAVPK+IL+LMNV
Sbjct: 197 KRRDSKDEDDGELENEDPSTSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 256
Query: 229 GLTRENVASHLQKFRLSLKRL-GNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSP 287
GLTRENVASHLQKFRL LKRL G + G+ S +++G+L
Sbjct: 257 GLTRENVASHLQKFRLYLKRLSGVAQQQGGIPNSFCGPVEPNVKLGSL------------ 304
Query: 288 GRLSSSALSSS-YVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQ 331
GR AL++S +P + L + + G +S ++ P + Q
Sbjct: 305 GRFDIQALAASGQIPPQTLAALQA----ELLGRPTSNLVLPAMDQ 345
>gi|357113330|ref|XP_003558456.1| PREDICTED: uncharacterized protein LOC100821963 [Brachypodium
distachyon]
Length = 677
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 170/357 (47%), Positives = 224/357 (62%), Gaps = 64/357 (17%)
Query: 4 EEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKML 63
EE GG +FP+GM+VL VDDD TCL +L++ L +C+Y+ T +++ AL ML
Sbjct: 5 EEAGGG---------EFPVGMKVLVVDDDPTCLAVLKQMLVQCRYDATTCSQSTRALSML 55
Query: 64 RENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYL 123
RENR FD++ISDV+MPDMDGF+LLELVGLEMDLPV+M+SA S T +VMKGI HGACDYL
Sbjct: 56 RENRRGFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYL 115
Query: 124 LKPVRMEELKNTWQHVIRRK-----------KVDPKDQNRSP---HEFE----------- 158
+KPVRMEELKN WQHV+R+K +D D+NR +E+
Sbjct: 116 IKPVRMEELKNIWQHVVRKKFSGNKEHEHSGSLDDTDRNRPANNDNEYASSINDGADDSW 175
Query: 159 KSYRKRKDQDGED-EDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAV 217
KS +K++D++ +D E E GD S + KKPRVVW+ ELH +F+ AVN LG+DKAV
Sbjct: 176 KSQKKKRDKEEDDSELESGDP-------SNSSKKPRVVWSVELHQQFVNAVNHLGIDKAV 228
Query: 218 PKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSS--YLRIGAL 275
PKKIL+LMNV GLTRENVASHLQKFRL LKR+ AG+ + SS +G L
Sbjct: 229 PKKILELMNVPGLTRENVASHLQKFRLYLKRIAQH--HAGITNPYCTPASSAQVASLGGL 286
Query: 276 DGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQS 332
D ++ + G++ AL++ + ++GR +S M+ PG QS
Sbjct: 287 D----FQALAASGQIPPQALAA--LQDELLGRTTTS------------MVLPGRDQS 325
>gi|94449082|gb|ABF19058.1| ARR2 [Arabidopsis thaliana]
gi|94449084|gb|ABF19059.1| ARR2 [Arabidopsis thaliana]
Length = 664
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 168/352 (47%), Positives = 218/352 (61%), Gaps = 52/352 (14%)
Query: 7 GGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLREN 66
GGS+SD FP +RVL VDDD TCL ILE+ L C Y VT NRA AL +LR+N
Sbjct: 17 GGSNSD------PFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAEIALSLLRKN 70
Query: 67 RNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKP 126
+N FD+VISDV+MPDMDGFKLLE VGLEMDLPV+M+SA +V+KG+ HGA DYL+KP
Sbjct: 71 KNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKP 130
Query: 127 VRMEELKNTWQHVIRRKKVDPKDQNRSPH-----EFEKSYRKRKDQDGEDED-------- 173
VR+E LKN WQHV+R+K+ + N S H E R R+ Q ED D
Sbjct: 131 VRIEALKNIWQHVVRKKR---NEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNE 187
Query: 174 -----------EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKIL 222
E+ DD G + E+S++ KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL
Sbjct: 188 GNGRSSRKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKIL 247
Query: 223 DLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMV--ASVGSKDSSYLRIGALDGFGG 280
++MNV GLTRENVASHLQK+R+ L+RLG + G++ + + +D S+ + +L+GF
Sbjct: 248 EMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGIMNHSFMTGQDQSFGPLSSLNGFD- 306
Query: 281 SHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQS 332
L S A++ P S+ A L G+ + KPG+S S
Sbjct: 307 ---------LQSLAVTGQLPPQSL-------AQLQAAGLGRPTLAKPGMSVS 342
>gi|4210449|dbj|BAA74528.1| ARR1 protein [Arabidopsis thaliana]
Length = 669
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 173/399 (43%), Positives = 238/399 (59%), Gaps = 57/399 (14%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
V++ FP G+RVL VDDD TCL ILE+ LR C YEVT NRA AL +LR+N++ FD+VIS
Sbjct: 29 VVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVIS 88
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV+MPDMDGFKLLE VGLEMDLPV+M+SA +V+KG+ HGA DYL+KPVRME LKN
Sbjct: 89 DVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNI 148
Query: 136 WQHVIRRKKV-----------------------------------DPKDQNRSP----HE 156
WQHV+R+++ D D N S +
Sbjct: 149 WQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNN 208
Query: 157 FEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKA 216
+ S RKRKD++GE++ +D D+D ++ KKPRVVW+ ELH +F+ AVN LG++KA
Sbjct: 209 WRSSSRKRKDEEGEEQGDDKDED------ASNLKKPRVVWSVELHQQFVAAVNQLGVEKA 262
Query: 217 VPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMV--ASVGSKDSSYLRIGA 274
VPKKIL+LMNV GLTRENVASHLQK+R+ L+RLG + G + + + +D+S+ +
Sbjct: 263 VPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLST 322
Query: 275 LDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFN 334
L+GF ++ G+L + +L+ G +GR A +S G+ S ++ SF+
Sbjct: 323 LNGF-DLQALAVTGQLPAQSLAQLQAAG--LGR---PAMVSKSGLPVSSIVDERSIFSFD 376
Query: 335 TSFNTIGKN---QQAMFPANRNSNLVQGVQTSLEPNQMP 370
+ G+ NL+ GV T L+ Q+P
Sbjct: 377 NTKTRFGEGLGHHGQQPQQQPQMNLLHGVPTGLQ-QQLP 414
>gi|297737623|emb|CBI26824.3| unnamed protein product [Vitis vinifera]
Length = 428
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 165/345 (47%), Positives = 213/345 (61%), Gaps = 37/345 (10%)
Query: 8 GSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENR 67
GS + V D+FP G+RVL VDDD TCLKILE+ LR C Y VT ++A AL +LRE +
Sbjct: 17 GSCKADVVVSDQFPAGLRVLVVDDDVTCLKILEQMLRRCLYHVTTCSQATIALNILREKK 76
Query: 68 NNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPV 127
FD+V+SDV+MPDMDG+KLLE VGLEMDLPV+M+SA T VM+GI HGACDYL+KP+
Sbjct: 77 GCFDIVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPI 136
Query: 128 RMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGE----------------- 170
R EELKN WQHV+R+K + K+ S + KR +D E
Sbjct: 137 REEELKNIWQHVVRKKWNENKEHEHSGSLEDNDRHKRGGEDAEYASSVNEGAEGILKGQK 196
Query: 171 -DEDEDGDDDGH-ENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVE 228
D +DDG ENE+ +T KKPRVVW+ ELH +F+ AVN LG+DKAVPK+IL+LMNV
Sbjct: 197 KRRDSKDEDDGELENEDPSTSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 256
Query: 229 GLTRENVASHLQKFRLSLKRL-GNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSP 287
GLTRENVASHLQKFRL LKRL G + G+ S +++G+L
Sbjct: 257 GLTRENVASHLQKFRLYLKRLSGVAQQQGGIPNSFCGPVEPNVKLGSL------------ 304
Query: 288 GRLSSSALSSS-YVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQ 331
GR AL++S +P + L + + G +S ++ P + Q
Sbjct: 305 GRFDIQALAASGQIPPQTLAALQA----ELLGRPTSNLVLPAMDQ 345
>gi|224099559|ref|XP_002311532.1| type-b response regulator [Populus trichocarpa]
gi|222851352|gb|EEE88899.1| type-b response regulator [Populus trichocarpa]
Length = 303
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 150/262 (57%), Positives = 186/262 (70%), Gaps = 20/262 (7%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
V D+FP G+RVL VDDD TCL++LEK LR C Y VT ++A ALK+LRE + FD+V+S
Sbjct: 1 VSDQFPAGLRVLVVDDDITCLRLLEKMLRRCLYHVTTCSQATAALKLLRERKGCFDVVLS 60
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV+MPDMDGFKLLELVGLEMDLPV+M+SA T VM+GI+HGACDYL+KP+R EELKN
Sbjct: 61 DVHMPDMDGFKLLELVGLEMDLPVIMMSADGRTSAVMRGISHGACDYLIKPIREEELKNI 120
Query: 136 WQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDED-------------------EDG 176
WQHVIR+K + K+Q S FE + R ++ D E+ +D
Sbjct: 121 WQHVIRKKWNENKEQEHSG-SFEDNDRHKRGNDAENASSVSEGAEGVLKGQKKRSIAKDE 179
Query: 177 DDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVA 236
DD EN++ + KKPRVVW+ ELH +F+ AVN LG+DKAVPK+IL+LMNV GLTRENVA
Sbjct: 180 DDAELENDDPSASKKPRVVWSVELHQQFVSAVNHLGIDKAVPKRILELMNVPGLTRENVA 239
Query: 237 SHLQKFRLSLKRLGNKTLEAGM 258
SHLQKFRL LKRL + G+
Sbjct: 240 SHLQKFRLYLKRLSGVAQQGGI 261
>gi|42570473|ref|NP_850600.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|222423228|dbj|BAH19591.1| AT3G16857 [Arabidopsis thaliana]
gi|332642354|gb|AEE75875.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 669
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 173/399 (43%), Positives = 238/399 (59%), Gaps = 57/399 (14%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
V++ FP G+RVL VDDD TCL ILE+ LR C YEVT NRA AL +LR+N++ FD+VIS
Sbjct: 29 VVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVIS 88
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV+MPDMDGFKLLE VGLEMDLPV+M+SA +V+KG+ HGA DYL+KPVRME LKN
Sbjct: 89 DVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNI 148
Query: 136 WQHVIRRKKV-----------------------------------DPKDQNRSP----HE 156
WQHV+R+++ D D N S +
Sbjct: 149 WQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNN 208
Query: 157 FEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKA 216
+ S RKRKD++GE++ +D D+D ++ KKPRVVW+ ELH +F+ AVN LG++KA
Sbjct: 209 WRSSSRKRKDEEGEEQGDDKDED------ASNLKKPRVVWSVELHQQFVAAVNQLGVEKA 262
Query: 217 VPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMV--ASVGSKDSSYLRIGA 274
VPKKIL+LMNV GLTRENVASHLQK+R+ L+RLG + G + + + +D+S+ +
Sbjct: 263 VPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLST 322
Query: 275 LDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFN 334
L+GF ++ G+L + +L+ G +GR A +S G+ S ++ SF+
Sbjct: 323 LNGF-DLQALAVTGQLPAQSLAQLQAAG--LGR---PAMVSKSGLPVSSIVDERSIFSFD 376
Query: 335 TSFNTIGKN---QQAMFPANRNSNLVQGVQTSLEPNQMP 370
+ G+ NL+ GV T L+ Q+P
Sbjct: 377 NTKTRFGEGLGHHGQQPQQQPQMNLLHGVPTGLQ-QQLP 414
>gi|15810171|gb|AAL06987.1| AT3g16857/MUH15_1 [Arabidopsis thaliana]
Length = 690
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 173/399 (43%), Positives = 238/399 (59%), Gaps = 57/399 (14%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
V++ FP G+RVL VDDD TCL ILE+ LR C YEVT NRA AL +LR+N++ FD+VIS
Sbjct: 29 VVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVIS 88
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV+MPDMDGFKLLE VGLEMDLPV+M+SA +V+KG+ HGA DYL+KPVRME LKN
Sbjct: 89 DVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNI 148
Query: 136 WQHVIRRKKV-----------------------------------DPKDQNRSP----HE 156
WQHV+R+++ D D N S +
Sbjct: 149 WQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNN 208
Query: 157 FEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKA 216
+ S RKRKD++GE++ +D D+D ++ KKPRVVW+ ELH +F+ AVN LG++KA
Sbjct: 209 WRSSSRKRKDEEGEEQGDDKDED------ASNLKKPRVVWSVELHQQFVAAVNQLGVEKA 262
Query: 217 VPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMV--ASVGSKDSSYLRIGA 274
VPKKIL+LMNV GLTRENVASHLQK+R+ L+RLG + G + + + +D+S+ +
Sbjct: 263 VPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLST 322
Query: 275 LDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFN 334
L+GF ++ G+L + +L+ G +GR A +S G+ S ++ SF+
Sbjct: 323 LNGF-DLQALAVTGQLPAQSLAQLQAAG--LGR---PAMVSKSGLPVSSIVDERSIFSFD 376
Query: 335 TSFNTIGKN---QQAMFPANRNSNLVQGVQTSLEPNQMP 370
+ G+ NL+ GV T L+ Q+P
Sbjct: 377 NTKTRFGEGLGHHGQQPQQQPQMNLLHGVPTGLQ-QQLP 414
>gi|42564262|ref|NP_566561.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|50400604|sp|Q940D0.2|ARR1_ARATH RecName: Full=Two-component response regulator ARR1
gi|11994744|dbj|BAB03073.1| ARR1 protein [Arabidopsis thaliana]
gi|51971120|dbj|BAD44252.1| putative ARR1 protein [Arabidopsis thaliana]
gi|332642355|gb|AEE75876.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 690
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 173/399 (43%), Positives = 238/399 (59%), Gaps = 57/399 (14%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
V++ FP G+RVL VDDD TCL ILE+ LR C YEVT NRA AL +LR+N++ FD+VIS
Sbjct: 29 VVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVIS 88
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV+MPDMDGFKLLE VGLEMDLPV+M+SA +V+KG+ HGA DYL+KPVRME LKN
Sbjct: 89 DVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNI 148
Query: 136 WQHVIRRKKV-----------------------------------DPKDQNRSP----HE 156
WQHV+R+++ D D N S +
Sbjct: 149 WQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNN 208
Query: 157 FEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKA 216
+ S RKRKD++GE++ +D D+D ++ KKPRVVW+ ELH +F+ AVN LG++KA
Sbjct: 209 WRSSSRKRKDEEGEEQGDDKDED------ASNLKKPRVVWSVELHQQFVAAVNQLGVEKA 262
Query: 217 VPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMV--ASVGSKDSSYLRIGA 274
VPKKIL+LMNV GLTRENVASHLQK+R+ L+RLG + G + + + +D+S+ +
Sbjct: 263 VPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLST 322
Query: 275 LDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFN 334
L+GF ++ G+L + +L+ G +GR A +S G+ S ++ SF+
Sbjct: 323 LNGF-DLQALAVTGQLPAQSLAQLQAAG--LGR---PAMVSKSGLPVSSIVDERSIFSFD 376
Query: 335 TSFNTIGKN---QQAMFPANRNSNLVQGVQTSLEPNQMP 370
+ G+ NL+ GV T L+ Q+P
Sbjct: 377 NTKTRFGEGLGHHGQQPQQQPQMNLLHGVPTGLQ-QQLP 414
>gi|224111430|ref|XP_002315852.1| type-b response regulator [Populus trichocarpa]
gi|222864892|gb|EEF02023.1| type-b response regulator [Populus trichocarpa]
Length = 663
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 161/313 (51%), Positives = 203/313 (64%), Gaps = 32/313 (10%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDD TCL++LEK L C Y VT ++A ALK+LRE + FD+V+SDV
Sbjct: 32 DQFPAGLRVLVVDDDITCLRLLEKMLCRCLYNVTTCSQATAALKLLRERKGCFDVVLSDV 91
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+MPDMDGFKLLELVGLEMDLPV+M+SA T VM+GI HGACDYL+KP+R EELKN WQ
Sbjct: 92 HMPDMDGFKLLELVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQ 151
Query: 138 HVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGE-----DEDEDG--------------DD 178
HVIR+K + K+Q S + + KR + D E +E +G DD
Sbjct: 152 HVIRKKWNENKEQEHSGSFEDNDWYKRGNDDTENASSVNEGAEGVLKGQKKRNIAKEEDD 211
Query: 179 DGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASH 238
+ E ++ + KKPRVVW+ ELH +F+ AVN LG+DKAVPK+IL+LMNV GLTRENVASH
Sbjct: 212 NELEIDDPSASKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 271
Query: 239 LQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSAL-SS 297
LQKFRL LKRL + G+ S G LD + VN GR AL +S
Sbjct: 272 LQKFRLYLKRLSGVAQQGGI---------SNTFCGPLD---SNVKVNPLGRFDIQALAAS 319
Query: 298 SYVPGSMIGRLNS 310
S +P + L++
Sbjct: 320 SQIPPQTLAALHA 332
>gi|240255903|ref|NP_193346.4| two-component response regulator ARR2 [Arabidopsis thaliana]
gi|50400708|sp|Q9ZWJ9.1|ARR2_ARATH RecName: Full=Two-component response regulator ARR2; AltName:
Full=Receiver-like protein 5
gi|4210451|dbj|BAA74527.1| ARR2 protein [Arabidopsis thaliana]
gi|51969616|dbj|BAD43500.1| hypothetical protein [Arabidopsis thaliana]
gi|51970060|dbj|BAD43722.1| hypothetical protein [Arabidopsis thaliana]
gi|51971425|dbj|BAD44377.1| hypothetical protein [Arabidopsis thaliana]
gi|94958295|gb|ABF47278.1| ARR2 [Arabidopsis thaliana]
gi|94958297|gb|ABF47279.1| ARR2 [Arabidopsis thaliana]
gi|332658294|gb|AEE83694.1| two-component response regulator ARR2, partial [Arabidopsis
thaliana]
Length = 664
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 182/403 (45%), Positives = 236/403 (58%), Gaps = 63/403 (15%)
Query: 7 GGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLREN 66
GGS+SD FP +RVL VDDD TCL ILE+ L C Y VT NRA +AL +LR+N
Sbjct: 17 GGSNSD------PFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKN 70
Query: 67 RNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKP 126
+N FD+VISDV+MPDMDGFKLLE VGLEMDLPV+M+SA +V+KG+ HGA DYL+KP
Sbjct: 71 KNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKP 130
Query: 127 VRMEELKNTWQHVIRRKKVDPKDQNRSPH-----EFEKSYRKRKDQDGEDED-------- 173
VR+E LKN WQHV+R+K+ + N S H E R R+ Q ED D
Sbjct: 131 VRIEALKNIWQHVVRKKR---NEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNE 187
Query: 174 -----------EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKIL 222
E+ DD G + E+S++ KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL
Sbjct: 188 GNGRSSRKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKIL 247
Query: 223 DLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMV--ASVGSKDSSYLRIGALDGFGG 280
++MNV GLTRENVASHLQK+R+ L+RLG + G + + + +D S+ + +L+GF
Sbjct: 248 EMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQSFGPLSSLNGFD- 306
Query: 281 SHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTI 340
L S A++ P S+ A L G+ + KPG+S S +I
Sbjct: 307 ---------LQSLAVTGQLPPQSL-------AQLQAAGLGRPTLAKPGMSVSPLVDQRSI 350
Query: 341 --GKNQQAMF-----PANRNSNLVQGVQTS----LEPNQMPQS 372
+N + F N NL+ GV T L P Q QS
Sbjct: 351 FNFENPKIRFGDGHGQTMNNGNLLHGVPTGSHMRLRPGQNVQS 393
>gi|302770951|ref|XP_002968894.1| type B response regulator [Selaginella moellendorffii]
gi|300163399|gb|EFJ30010.1| type B response regulator [Selaginella moellendorffii]
Length = 602
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/306 (53%), Positives = 202/306 (66%), Gaps = 35/306 (11%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDD+TCL IL+K L C Y+VT A AL MLREN+ FD+V+SDV
Sbjct: 12 DQFPAGLRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAMLRENKERFDVVLSDV 71
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
MPDMDGFKLLELVGLEMDLPV+M+SA +T LVMKGI HGACDYLLKP+R++ELKN WQ
Sbjct: 72 CMPDMDGFKLLELVGLEMDLPVIMMSANGETSLVMKGIIHGACDYLLKPIRIKELKNIWQ 131
Query: 138 HVIRRKKVDPKDQNRSPHEFEK--------------------SYRKRKDQDGEDEDEDGD 177
HV RRK+ KD + + H+ +K RK +D E+ + D D
Sbjct: 132 HVFRRKRNILKDADGADHDRQKRKPDEGDSMPAAGSAAAAGSKKRKEIKEDDEEFELDMD 191
Query: 178 DDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVAS 237
D S T KKPRVVW+ ELH +F+ AVN LG+DKAVPK+IL+LMNV+GLTRENVAS
Sbjct: 192 D-------SNTLKKPRVVWSVELHQQFVTAVNQLGIDKAVPKRILELMNVQGLTRENVAS 244
Query: 238 HLQKFRLSLKRL--GNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSS-SA 294
HLQK+RL LKRL + M +GS D SY I L H + +PG + +A
Sbjct: 245 HLQKYRLYLKRLSVAQQQNAVTMSMPLGS-DPSYNAIDNLQ----PHPIITPGSSQALAA 299
Query: 295 LSSSYV 300
L S+Y+
Sbjct: 300 LRSAYL 305
>gi|302784610|ref|XP_002974077.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
gi|300158409|gb|EFJ25032.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
Length = 607
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/298 (54%), Positives = 202/298 (67%), Gaps = 28/298 (9%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDD+TCL IL+K L C Y+VT A AL MLREN+ FD+V+SDV
Sbjct: 12 DQFPAGLRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAMLRENKERFDVVLSDV 71
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
MPDMDGFKLLELVGLEMDLPV+M+SA +T LVMKGI HGACDYLLKP+R++ELKN WQ
Sbjct: 72 CMPDMDGFKLLELVGLEMDLPVIMMSANGETSLVMKGIIHGACDYLLKPIRIKELKNIWQ 131
Query: 138 HVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGE-----------------DEDEDGDDDG 180
HV RRK+ KD + + H+ + KRK +G+ + ED D+
Sbjct: 132 HVFRRKRNILKDADGADHDRQ----KRKPDEGDSMPAAGSAAAAGSKKRKEIKEDDDEFE 187
Query: 181 HENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
+ ++S T KKPRVVW+ ELH +F+ AVN LG+DKAVPK+IL+LMNV+GLTRENVASHLQ
Sbjct: 188 LDMDDSNTLKKPRVVWSVELHQQFVTAVNQLGIDKAVPKRILELMNVQGLTRENVASHLQ 247
Query: 241 KFRLSLKRLGNKTLEAGMVASVG-SKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSS 297
K+RL LKRL + + S+ D SY I L H + +PG SS AL++
Sbjct: 248 KYRLYLKRLSVAQQQNAVTMSMPLGSDPSYNAIDNLQ----PHPIITPG--SSQALAA 299
>gi|298103720|emb|CBM42561.1| putative B-type response regulator 16 [Populus x canadensis]
Length = 663
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/313 (51%), Positives = 203/313 (64%), Gaps = 32/313 (10%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDD TCL++LEK L C Y VT ++A ALK+LRE + FD+V+SDV
Sbjct: 32 DQFPAGLRVLVVDDDITCLRLLEKMLCRCLYNVTTCSQATAALKLLRERKGCFDVVLSDV 91
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+MPDMDGFKLLELVGLEMDLPV+M+SA T VM+GI HGACDYL+KP+R EELKN WQ
Sbjct: 92 HMPDMDGFKLLELVGLEMDLPVIMMSADGRTSAVMRGIKHGACDYLIKPIREEELKNIWQ 151
Query: 138 HVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGE-----DEDEDG--------------DD 178
HVIR+K + K+Q S + + KR + D E +E +G DD
Sbjct: 152 HVIRKKWNENKEQEHSGSFEDNDWYKRGNDDTENASSVNEGAEGVLKGQKKRNIAKEEDD 211
Query: 179 DGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASH 238
+ E ++ + KKPRVVW+ ELH +F+ AVN LG+D+AVPK+IL+LMNV GLTRENVASH
Sbjct: 212 NELEIDDPSASKKPRVVWSVELHQQFVSAVNQLGIDEAVPKRILELMNVPGLTRENVASH 271
Query: 239 LQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSAL-SS 297
LQKFRL LKRL + G+ S G LD + VN GR AL +S
Sbjct: 272 LQKFRLYLKRLSGVAQQGGI---------SNTFCGPLD---SNVKVNPLGRFDIQALAAS 319
Query: 298 SYVPGSMIGRLNS 310
S +P + L++
Sbjct: 320 SQIPPQTLAALHA 332
>gi|302788023|ref|XP_002975781.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
gi|300156782|gb|EFJ23410.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
Length = 660
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 162/324 (50%), Positives = 210/324 (64%), Gaps = 40/324 (12%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
MRVL VDDDQT L ILE LR C+Y VT +A TAL +LRE++N+FDLVISDVYMPDMD
Sbjct: 1 MRVLVVDDDQTTLTILEAMLRRCRYNVTTCGKATTALALLREHKNDFDLVISDVYMPDMD 60
Query: 84 GFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK 143
GFKLLELVGLEMDLPV+M+S D VMKGI HGACDYLLKPVRMEEL+N WQH++R++
Sbjct: 61 GFKLLELVGLEMDLPVIMMSTDGDYNNVMKGITHGACDYLLKPVRMEELRNIWQHLVRKR 120
Query: 144 KVDPKD-QNRSPHEFEK---------------SYRKRKDQDGEDEDEDGDDDGHENENST 187
K + ++ + +P E +K +KRKD EDE D H++E+ +
Sbjct: 121 KNEARETETLTPAEADKLKGGGGDDVEHLSSACSKKRKDVKEEDEGVD-----HDSEDPS 175
Query: 188 TQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLK 247
+ KKPRVVW+ ELH +F+ AVN L +DKAVPKKIL+LM+V GLTRENVASHLQK+RL LK
Sbjct: 176 SLKKPRVVWSVELHQQFVNAVNKLNIDKAVPKKILELMDVPGLTRENVASHLQKYRLYLK 235
Query: 248 RLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGR 307
R +++ ++S+ G +DG G S S + V ++GR
Sbjct: 236 R----------ISAQQPQNSAGFSFGGVDG-----PAEGRGHGSFSLQAVPAVQQGVLGR 280
Query: 308 LNSSAGLSMHGIASSGMIKPGLSQ 331
+ ++ L AS+ + + GL Q
Sbjct: 281 IGTTNNLP----ASTALDQSGLLQ 300
>gi|109631196|gb|ABG35774.1| SRR384 [Striga asiatica]
Length = 569
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 147/260 (56%), Positives = 187/260 (71%), Gaps = 30/260 (11%)
Query: 14 DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLV 73
+G+ D+FP G+RVL VDDD TCL+ILEK L+ C YEVT NRA ALK LR+ RN +D+V
Sbjct: 21 NGLSDQFPAGLRVLVVDDDPTCLRILEKMLKNCLYEVTTCNRAGIALKFLRDKRNVYDIV 80
Query: 74 ISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELK 133
ISDV+MPDMDGFKLLE VGLEMDLPV M+SA +VMKG+ HGACDYL+KP+RME LK
Sbjct: 81 ISDVHMPDMDGFKLLEHVGLEMDLPVTMMSADDSKNVVMKGVTHGACDYLIKPIRMEALK 140
Query: 134 NTWQHVIRRKKVDPK-----------DQNRSPHEFEKSY----------RKRKDQDGEDE 172
N WQH++R+++ + K D+ + P + + S +KRKD+ EDE
Sbjct: 141 NIWQHLVRKRQHEWKEKDLDQHLGSVDEQKLPEDLDYSLSVSEENWNTSKKRKDE--EDE 198
Query: 173 DEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTR 232
D DD +++ KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+LMNV GL+R
Sbjct: 199 AVDKDD-------TSSLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLSR 251
Query: 233 ENVASHLQKFRLSLKRLGNK 252
ENVASHLQK+RL L+RL ++
Sbjct: 252 ENVASHLQKYRLYLRRLSSQ 271
>gi|255584969|ref|XP_002533196.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223526994|gb|EEF29188.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 669
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 166/355 (46%), Positives = 218/355 (61%), Gaps = 34/355 (9%)
Query: 15 GVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVI 74
V D+FP G+RVL VDDD TCL+ILE+ LR C Y VT ++A AL +LRE + FD+V+
Sbjct: 34 AVSDQFPAGLRVLVVDDDTTCLRILEQMLRRCLYHVTTCSQAKVALNLLRERKGCFDVVL 93
Query: 75 SDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKN 134
SDV+MPDMDGFKLLE VGLEMDLPV+M+SA T VM+GI HGACDYL+KP+R EELKN
Sbjct: 94 SDVHMPDMDGFKLLEHVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKN 153
Query: 135 TWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGE-----DEDEDG------------- 176
WQHV+R+K + K+ S + KR ++D E +E +G
Sbjct: 154 IWQHVVRKKWHENKEIEHSGSLEDNDRHKRGNEDAEYTSSVNEGTEGVLKGQKRRSNSKD 213
Query: 177 DDDGH-ENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENV 235
+DDG ++++ +T KKPRVVW+ ELH +F+ AVN LG+DKAVPK+IL+LMNV GLTRENV
Sbjct: 214 EDDGEPDSDDPSTSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 273
Query: 236 ASHLQKFRLSLKRLGNKTLEAGMVAS-VGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSA 294
ASHLQKFRL LKRL + G+ ++ G DS+ +NS GR A
Sbjct: 274 ASHLQKFRLYLKRLSGVAQQGGISSTFCGPMDSNV-------------KLNSLGRFDIQA 320
Query: 295 LSSS-YVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMF 348
L++S +P + L++ G + M +P L Q+ S I F
Sbjct: 321 LAASGQIPPQTLAALHAELFGRPTGSLVTTMDQPTLLQASRQSPKCIPVEHGVTF 375
>gi|51968898|dbj|BAD43141.1| hypothetical protein [Arabidopsis thaliana]
Length = 664
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 181/403 (44%), Positives = 235/403 (58%), Gaps = 63/403 (15%)
Query: 7 GGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLREN 66
GGS+SD FP +RVL VD D TCL ILE+ L C Y VT NRA +AL +LR+N
Sbjct: 17 GGSNSD------PFPANLRVLVVDGDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKN 70
Query: 67 RNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKP 126
+N FD+VISDV+MPDMDGFKLLE VGLEMDLPV+M+SA +V+KG+ HGA DYL+KP
Sbjct: 71 KNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKP 130
Query: 127 VRMEELKNTWQHVIRRKKVDPKDQNRSPH-----EFEKSYRKRKDQDGEDED-------- 173
VR+E LKN WQHV+R+K+ + N S H E R R+ Q ED D
Sbjct: 131 VRIEALKNIWQHVVRKKR---NEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNE 187
Query: 174 -----------EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKIL 222
E+ DD G + E+S++ KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL
Sbjct: 188 GNGRSSRKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKIL 247
Query: 223 DLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMV--ASVGSKDSSYLRIGALDGFGG 280
++MNV GLTRENVASHLQK+R+ L+RLG + G + + + +D S+ + +L+GF
Sbjct: 248 EMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQSFGPLSSLNGFD- 306
Query: 281 SHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTI 340
L S A++ P S+ A L G+ + KPG+S S +I
Sbjct: 307 ---------LQSLAVTGQLPPQSL-------AQLQAAGLGRPTLAKPGMSVSPLVDQRSI 350
Query: 341 --GKNQQAMF-----PANRNSNLVQGVQTS----LEPNQMPQS 372
+N + F N NL+ GV T L P Q QS
Sbjct: 351 FNFENPKIRFGDGHGQTMNNGNLLHGVPTGSHMRLRPGQNVQS 393
>gi|297830298|ref|XP_002883031.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
gi|297328871|gb|EFH59290.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
Length = 687
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 173/399 (43%), Positives = 237/399 (59%), Gaps = 58/399 (14%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
V++ FP G+RVL VDDD TCL ILE+ LR C YEVT NRA AL +LR+N++ FD+VIS
Sbjct: 27 VVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVIS 86
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV+MPDMDGFKLLE VGLEMDLPV+M+SA +V+KG+ HGA DYL+KPVRME LKN
Sbjct: 87 DVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNI 146
Query: 136 WQHVIRRKKV-----------------------------------DPKDQNRSP----HE 156
WQHV+R+++ D D N S +
Sbjct: 147 WQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNN 206
Query: 157 FEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKA 216
+ S RKRKD++GE++ +D D+D ++ KKPRVVW+ ELH +F+ AVN LG + A
Sbjct: 207 WRSSSRKRKDEEGEEQGDDKDED------ASNLKKPRVVWSVELHQQFVAAVNQLGAE-A 259
Query: 217 VPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMV--ASVGSKDSSYLRIGA 274
VPKKIL+LMNV GLTRENVASHLQK+R+ L+RLG + G + + + +D+S+ +
Sbjct: 260 VPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLST 319
Query: 275 LDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFN 334
L+GF ++ G+L + +L+ V G +GR A +S G+ S ++ SF+
Sbjct: 320 LNGF-DLQALAVTGQLPAQSLAQLQVAG--LGR---PAMVSKSGLPVSSIVDERSIFSFD 373
Query: 335 TSFNTIGKN---QQAMFPANRNSNLVQGVQTSLEPNQMP 370
+ G+ NL+ GV T L+ Q+P
Sbjct: 374 NTKTRFGEGLGHHGQQPQQQPQMNLLHGVPTGLQ-QQLP 411
>gi|302794410|ref|XP_002978969.1| type B response regulator [Selaginella moellendorffii]
gi|300153287|gb|EFJ19926.1| type B response regulator [Selaginella moellendorffii]
Length = 580
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 149/293 (50%), Positives = 191/293 (65%), Gaps = 51/293 (17%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
M +K G + + + KFP G+RVLAVDDD TCL+IL + LR+C YEVT+ RA AL
Sbjct: 1 MVGVDKTGIAMPQAKDLGKFPAGLRVLAVDDDPTCLRILAQMLRKCSYEVTMCTRATEAL 60
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+LREN++ FDL+ISDV+MPDMDGFKLLE VGLEMDLPV+M S+ +T +VMKG+ HGAC
Sbjct: 61 SLLRENKDRFDLMISDVFMPDMDGFKLLEYVGLEMDLPVIMTSSNGETGIVMKGVIHGAC 120
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRS--------------------------- 153
DYL+KPVR EEL+N WQHV+R+K+ + +D S
Sbjct: 121 DYLIKPVRTEELRNIWQHVVRKKRNEARDVEASGSVEDGGERNHHHHHQQQQHHSSQQQR 180
Query: 154 ------PHEFE-----------KSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVW 196
EF K ++RKD DG++ E H+N++S+T KK RVVW
Sbjct: 181 RASTIDEGEFNSDGGGGGDPNWKLAKRRKD-DGDETAE------HDNDDSSTLKKQRVVW 233
Query: 197 TTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
+ ELH +F+ AVN LG+DKAVPKKIL+ M+V GLTRENVASHLQK+RL L+RL
Sbjct: 234 SVELHQQFVNAVNQLGIDKAVPKKILESMSVHGLTRENVASHLQKYRLYLRRL 286
>gi|357449081|ref|XP_003594816.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355483864|gb|AES65067.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 606
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/245 (56%), Positives = 173/245 (70%), Gaps = 11/245 (4%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
V D+FP G+RVL VDDD TCL ILE+ LR C YEVT RA AL +LREN+N FD+V+S
Sbjct: 25 VSDQFPAGLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLS 84
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV+MPDMDGFKLLE +GLEMDLPV+M+SA +VMKG+ HGACDYL+KPVR+E LKN
Sbjct: 85 DVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNI 144
Query: 136 WQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHEN-----------E 184
WQHV+R++K KD +S E+ K+ D + + +
Sbjct: 145 WQHVVRKRKNSWKDLRQSGGLDERDREKKASTDANYSSSTNEGKSSKKRRDEEDEADDRD 204
Query: 185 NSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRL 244
+ +T KKPRVVW+ ELH +F+ VN LGLDKAVPKKI+++MNV GLTRENVASHLQK+RL
Sbjct: 205 DCSTSKKPRVVWSIELHQQFMAVVNQLGLDKAVPKKIMEMMNVPGLTRENVASHLQKYRL 264
Query: 245 SLKRL 249
L+RL
Sbjct: 265 YLRRL 269
>gi|312283277|dbj|BAJ34504.1| unnamed protein product [Thellungiella halophila]
Length = 668
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 240/419 (57%), Gaps = 46/419 (10%)
Query: 14 DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLV 73
+ V++ FP G+RVL VDDD TCL ILE+ LR C YEVT NRA AL +LR+N++ FD+V
Sbjct: 25 ESVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIV 84
Query: 74 ISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELK 133
ISDV+MPDMDGFKLLE VGLEMDLPV+M+SA +V+KG+ HGA DYL+KPVRME LK
Sbjct: 85 ISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALK 144
Query: 134 NTWQHVIRRKKV------------DPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGH 181
N WQHV+R+++ D ++ + +D D++ ++G+
Sbjct: 145 NIWQHVVRKRRSEWSVPEHSGSVEDTGERQQQQQRGGGGAAVSGGEDAADDNSSSVNEGN 204
Query: 182 E----------------------NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPK 219
+E+++ KKPRVVW+ ELH +F+ AVN LG++KAVPK
Sbjct: 205 NWRSSSSSRKRKDEEGEEQGEDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPK 264
Query: 220 KILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMV--ASVGSKDSSYLRIGALDG 277
KIL+LMNV GLTRENVASHLQK+R+ L+RLG + G + + + +D+S+ + L+G
Sbjct: 265 KILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLSTLNG 324
Query: 278 FGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFN--- 334
F ++ G+L + +L+ G +GR A +S G+ S ++ SF+
Sbjct: 325 F-DLQALAVTGQLPAQSLAQLQAAG--LGR---PAMVSKSGLPVSSIVDERSIFSFDNPK 378
Query: 335 TSFNTIGKNQQAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAA 393
T F G + NL+ GV T +EP Q+ + +G+ I A A
Sbjct: 379 TRFGD-GLGHHGQQQQTQQMNLLHGVPTGMEPRQLAGLQQQLPVGNRMSIQQQIAAVRA 436
>gi|302824731|ref|XP_002994006.1| hypothetical protein SELMODRAFT_187683 [Selaginella moellendorffii]
gi|300138168|gb|EFJ04946.1| hypothetical protein SELMODRAFT_187683 [Selaginella moellendorffii]
Length = 376
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 146/277 (52%), Positives = 185/277 (66%), Gaps = 51/277 (18%)
Query: 17 IDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISD 76
+ KFP G+RVLAVDDD TCL+IL + LR+C YEVT+ RA AL +LREN++ FDL+ISD
Sbjct: 7 LGKFPAGLRVLAVDDDPTCLRILAQMLRKCSYEVTMCTRATEALSLLRENKDRFDLMISD 66
Query: 77 VYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTW 136
V+MPDMDGFKLLE VGLEMDLPV+M S+ +T +VMKG+ HGACDYL+KPVR EEL+N W
Sbjct: 67 VFMPDMDGFKLLEYVGLEMDLPVIMTSSNGETGIVMKGVIHGACDYLIKPVRTEELRNIW 126
Query: 137 QHVIRRKKVDPKDQNRS---------------------------------PHEFE----- 158
QHV+R+K+ + +D S EF
Sbjct: 127 QHVVRKKRNEARDVEASGSVEDGGERNHHHHHQQQQHHSSQQQRRASTIDEGEFNSDGGG 186
Query: 159 ------KSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLG 212
K ++RKD DG++ E H+N++S+T KK RVVW+ ELH +F+ AVN LG
Sbjct: 187 GGDPNWKLAKRRKD-DGDETAE------HDNDDSSTLKKQRVVWSVELHQQFVNAVNQLG 239
Query: 213 LDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
+DKAVPKKIL+ M+V GLTRENVASHLQK+RL L+RL
Sbjct: 240 IDKAVPKKILESMSVHGLTRENVASHLQKYRLYLRRL 276
>gi|388493620|gb|AFK34876.1| unknown [Medicago truncatula]
Length = 606
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/245 (56%), Positives = 172/245 (70%), Gaps = 11/245 (4%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
V D+FP G+RVL VDDD TCL ILE+ LR C YEVT RA AL +LREN+N FD+V+S
Sbjct: 25 VSDQFPAGLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLS 84
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV+MPDMDGFKLLE +GLEMDLPV+M+SA +VMKG+ HGACDYL+KPVR+E LKN
Sbjct: 85 DVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNI 144
Query: 136 WQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHEN-----------E 184
WQHV+R++K KD +S E+ K+ D + + +
Sbjct: 145 WQHVVRKRKNSWKDLRQSGGLDERDREKKASTDANYSSSTNEGKSSKKRRDEEDEADDRD 204
Query: 185 NSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRL 244
+ +T KKPRVVW+ ELH +F+ VN LGLDKAVPKKI+++MNV GLTRENVAS LQK+RL
Sbjct: 205 DCSTSKKPRVVWSIELHQQFMAVVNQLGLDKAVPKKIMEMMNVPGLTRENVASRLQKYRL 264
Query: 245 SLKRL 249
L+RL
Sbjct: 265 YLRRL 269
>gi|242070155|ref|XP_002450354.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
gi|241936197|gb|EES09342.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
Length = 694
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 144/266 (54%), Positives = 180/266 (67%), Gaps = 37/266 (13%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENR--NNFDLVIS 75
D FP G+RVLAVDDD+ CLKILE+ L+ C Y TV A TAL MLRE + N FDLVIS
Sbjct: 4 DTFPAGLRVLAVDDDRVCLKILERQLKYCNYNATVVTDARTALDMLRERKDGNQFDLVIS 63
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV MP+MDGFKLLEL+GLEMDLPV+MLSA ++T+ +MKGI HGACDY++KPVR+E+L+
Sbjct: 64 DVVMPNMDGFKLLELIGLEMDLPVIMLSANNETQTIMKGIKHGACDYIVKPVRLEQLRGI 123
Query: 136 WQHVIRRKKVDP---------------------------KDQNRSPHEFEKSYRKRKDQD 168
W HV++ K DP KD+N + + K Y K+ +
Sbjct: 124 WTHVVKNGKTDPRNTISSGNDDDVQKLPSGDELPSGDADKDENIAANR-RKKYSKKNKRI 182
Query: 169 GEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVE 228
E DED NEN++ QKK RV W +LH KF+ AV+ +G+D AVPKKIL +MNVE
Sbjct: 183 VEVADED-------NENTSAQKKQRVRWCGQLHRKFVEAVSQIGIDSAVPKKILKIMNVE 235
Query: 229 GLTRENVASHLQKFRLSLKRLGNKTL 254
GLTRENVASHLQK+R+ LK+LG+ TL
Sbjct: 236 GLTRENVASHLQKYRIYLKKLGDGTL 261
>gi|302799824|ref|XP_002981670.1| hypothetical protein SELMODRAFT_115021 [Selaginella moellendorffii]
gi|300150502|gb|EFJ17152.1| hypothetical protein SELMODRAFT_115021 [Selaginella moellendorffii]
Length = 413
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 143/293 (48%), Positives = 196/293 (66%), Gaps = 24/293 (8%)
Query: 17 IDKF-PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
+D F P G++VL VDDD CL +LE+ LREC+Y VT +RA AL +LRE + +FD+VIS
Sbjct: 1 MDHFSPTGLKVLVVDDDPCCLTLLERMLRECKYAVTTCSRATAALTILRERKESFDVVIS 60
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV+MPDMDGFKLLEL+GLEM +PV+M+SA +T VMKG+ +GACDYL+KPVR+EEL+N
Sbjct: 61 DVHMPDMDGFKLLELIGLEMGIPVIMMSASGETDAVMKGVVYGACDYLVKPVRIEELRNI 120
Query: 136 WQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDED--------------GDDDGH 181
WQHV+RR+ D ++ +P E+E R E+ D D G G
Sbjct: 121 WQHVVRRRTKDSAVRDEAPEEWEDFMRSTPTDSSEEADVDLRLLRKKKRPSCDFGGGGGD 180
Query: 182 ENENS-TTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
E+ S + KK RVVW+ +LH +F+ A+N +G++KAVPK+IL++MN++GLTRENVASHLQ
Sbjct: 181 ESMRSIASNKKARVVWSFDLHQQFVKAINHIGIEKAVPKRILEVMNIQGLTRENVASHLQ 240
Query: 241 KFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSS 293
K+RL LKRL T E +AS + + + FGG+ ++ R SS+
Sbjct: 241 KYRLYLKRLSGVTPEPFPIASFQAYEGA--------TFGGTMQIHHHQRSSST 285
>gi|302768857|ref|XP_002967848.1| type B response regulator [Selaginella moellendorffii]
gi|300164586|gb|EFJ31195.1| type B response regulator [Selaginella moellendorffii]
Length = 414
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/293 (48%), Positives = 196/293 (66%), Gaps = 24/293 (8%)
Query: 17 IDKF-PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
+D F P G++VL VDDD CL +LE+ LREC+Y VT +RA AL +LRE + +FD+VIS
Sbjct: 1 MDHFSPTGLKVLVVDDDPCCLTLLERMLRECKYAVTTCSRATAALTILRERKESFDVVIS 60
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV+MPDMDGFKLLEL+GLEM +PV+M+SA +T VMKG+ +GACDYL+KPVR+EEL+N
Sbjct: 61 DVHMPDMDGFKLLELIGLEMGIPVIMMSASGETDAVMKGVVYGACDYLVKPVRIEELRNI 120
Query: 136 WQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDED--------------GDDDGH 181
WQHV+RR+ D ++ +P E+E R E+ D D G G
Sbjct: 121 WQHVVRRRTKDSAVRDEAPEEWEDFMRSTPTDSSEEADVDLRLLRKKKRPSCDFGGGGGD 180
Query: 182 ENENS-TTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
E+ S + KK RVVW+ +LH +F+ A+N +G++KAVPK+IL++MN++GLTRENVASHLQ
Sbjct: 181 ESVRSIASNKKARVVWSFDLHQQFVKAINHIGIEKAVPKRILEVMNIQGLTRENVASHLQ 240
Query: 241 KFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSS 293
K+RL LKRL T E +AS + + + FGG+ ++ R SS+
Sbjct: 241 KYRLYLKRLSGVTPEPFPIASFQAYEGA--------TFGGTMQIHHHQRSSST 285
>gi|242059591|ref|XP_002458941.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
gi|241930916|gb|EES04061.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
Length = 579
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 176/413 (42%), Positives = 223/413 (53%), Gaps = 59/413 (14%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL VDDD T LKILEK LR+C YEVT A AL++LRE RN FD+VISDV M
Sbjct: 9 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVALQILRERRNKFDIVISDVNM 68
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGFKLLEL+GLEMDLPV+M+S +T VMKG+ HGACDYLLKPVRM+EL+N WQHV
Sbjct: 69 PDMDGFKLLELIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 128
Query: 140 IRRK--KVDPKDQNRSPHEFE--------------------KSYRKRKDQDGEDEDEDGD 177
R+K +V + N S + + + RKRKD D + D+D
Sbjct: 129 YRKKMHEVKEIEGNDSCDDLQIFRNGVEGFDERGLFMRADSDTMRKRKDMDKDHADQDSS 188
Query: 178 DDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVAS 237
D T KK RVVW+ +LH KF+ AVN +G DK PKKILDLM+V GLTRENVAS
Sbjct: 189 D-------GATVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMSVPGLTRENVAS 241
Query: 238 HLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNS-PGRLSSSALS 296
HLQK+RL L RL + E M G+ + G D S PG LS+
Sbjct: 242 HLQKYRLYLSRLQKQNEERIM----GAARQDFSHKGPSDNLNLRSSFEEQPGNLSNGFQH 297
Query: 297 SSY-------VPGSMIGRLNSSAGLSM---HGIASSGMIKPGLSQSFNTSFNTIGKNQQA 346
SS +P + +S L + +G + S + P Q+ ++ G
Sbjct: 298 SSQKIQAQTNIPDPHLDDTKTSVPLKVPDKNGTSVSDAVDP---QNITSASPLSGVFSFE 354
Query: 347 MFPANRNSNL-------VQGVQTSLEPNQMPQSESTTH-----IGDFNHINSP 387
P N++ L Q S+ P Q Q H +GD++ + P
Sbjct: 355 RMPVNQDRKLSETMILECQSWSGSVPPKQFMQYPKHNHERCDLLGDYSCLPKP 407
>gi|302798186|ref|XP_002980853.1| type B response regulator [Selaginella moellendorffii]
gi|300151392|gb|EFJ18038.1| type B response regulator [Selaginella moellendorffii]
Length = 470
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 154/296 (52%), Positives = 200/296 (67%), Gaps = 21/296 (7%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FPIGMRVL VDDD CL +L+K L +C+Y VT +RA+ AL++LRE + FDLVISDVYM
Sbjct: 11 FPIGMRVLVVDDDPLCLLLLKKMLLQCKYHVTACSRAVEALQLLREKKFQFDLVISDVYM 70
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGFKLLEL+GLEMDLPV+M+S +T +VM+GI HGACDYLLKPVR+EEL+N WQHV
Sbjct: 71 PDMDGFKLLELIGLEMDLPVIMMSGNGETSVVMEGITHGACDYLLKPVRIEELRNIWQHV 130
Query: 140 IRRKKVDPKDQNRSPHEF--------EKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKK 191
+R++ + S E+ E + +KRKD+D D G DD E+ + KK
Sbjct: 131 VRKRGAKEAAKEESSGEWDDSSEKFPEYTSKKRKDKDA---DSSGGDDPIEDMSGL--KK 185
Query: 192 PRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGN 251
RVVW+ +LH F+ AVN LG++KAVPK+IL++M+V+GLTRENVASHLQK+RL LKRL
Sbjct: 186 ARVVWSGDLHRLFVKAVNQLGVEKAVPKRILEIMSVQGLTRENVASHLQKYRLGLKRLSG 245
Query: 252 KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGR 307
+E +AS + +S FGGS V G SS ++ G + G+
Sbjct: 246 VDMEPHPIASFQADESG--------SFGGSMFVRPAGSSKSSIARTTSCAGGVFGK 293
>gi|413954817|gb|AFW87466.1| putative two-component response regulator family protein [Zea mays]
Length = 671
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 138/256 (53%), Positives = 180/256 (70%), Gaps = 19/256 (7%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENR--NNFDLVIS 75
D FP+G+RVLAVDDD+ CLKILE+ L+ C Y TV A TAL MLRE + N FDLVIS
Sbjct: 4 DTFPVGLRVLAVDDDRVCLKILERQLKCCNYNTTVVTDAQTALDMLRERKDGNQFDLVIS 63
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV M MDGFKLLEL+GLEMDLPV+MLSA S+T+ +MKGI HGACDY++KPVR+E+L+
Sbjct: 64 DVVMTKMDGFKLLELIGLEMDLPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQLRGI 123
Query: 136 WQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDG---------------DDDG 180
W HV++ K+DP+ N + + +K DG+ ++ G D
Sbjct: 124 WTHVVKNSKIDPR--NNIGSDSDDVVQKLPSGDGDKGEKVGETRQKKYPKKNKKTVDVAD 181
Query: 181 HENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
+NE ++ QKK RV W ELH KF+ AV +G+D+AVPKKIL++M+VEGLTRENVASHLQ
Sbjct: 182 EDNEKTSAQKKQRVQWCGELHQKFVQAVRQIGIDRAVPKKILEIMDVEGLTRENVASHLQ 241
Query: 241 KFRLSLKRLGNKTLEA 256
K+R+ L++LG+ TL +
Sbjct: 242 KYRIYLRKLGDGTLRS 257
>gi|255084361|ref|XP_002508755.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
gi|226524032|gb|ACO70013.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
Length = 488
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 142/273 (52%), Positives = 181/273 (66%), Gaps = 43/273 (15%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FPIG+RVL VDDD CLKI+EK L+ CQYEVT +R ALK LRE +++FD+V+SDV+M
Sbjct: 10 FPIGLRVLVVDDDPLCLKIVEKMLKRCQYEVTTFSRGAEALKTLRERKDDFDIVLSDVHM 69
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGFKLLE + LE+D+PV+M+SA T +V++GI HGA DYLLKPVR+EEL+N WQHV
Sbjct: 70 PDMDGFKLLEHIALELDIPVMMMSANCATDVVLRGIIHGAVDYLLKPVRIEELRNIWQHV 129
Query: 140 IRRKKVDPKDQNRSPH---------------EFEKSYRKRKDQDGEDED----------- 173
+RRK+ + RS K + +Q G+ +D
Sbjct: 130 VRRKRESSQGNLRSGEGGSNGRTVSGGSTGEGGGKDSKGSSEQHGDAKDKTGSAGGSGGS 189
Query: 174 -----------EDGDDD------GHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKA 216
++G D+ G ENE+S+ KKPRVVW+ ELH +F+ AVN LG+DKA
Sbjct: 190 SKRKKGSGKKGDEGTDEVKDGSGGDENEDSSALKKPRVVWSAELHQQFVTAVNQLGIDKA 249
Query: 217 VPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
VPK+ILDLM V+GLTRENVASHLQK+RL LKRL
Sbjct: 250 VPKRILDLMGVQGLTRENVASHLQKYRLYLKRL 282
>gi|302815333|ref|XP_002989348.1| hypothetical protein SELMODRAFT_447635 [Selaginella moellendorffii]
gi|300142926|gb|EFJ09622.1| hypothetical protein SELMODRAFT_447635 [Selaginella moellendorffii]
Length = 470
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 153/296 (51%), Positives = 201/296 (67%), Gaps = 21/296 (7%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FPIGMRVL VDDD CL +L+K L +C+Y VT +RA+ AL++LRE + FDLVISDVYM
Sbjct: 11 FPIGMRVLVVDDDPLCLLLLKKMLLQCKYHVTACSRAVEALQLLREKKFQFDLVISDVYM 70
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGFKLLEL+GLEMDLPV+M+S +T +VM+GI HGACDYLLKPVR+EEL+N WQHV
Sbjct: 71 PDMDGFKLLELIGLEMDLPVIMMSGNGETSVVMEGITHGACDYLLKPVRIEELRNIWQHV 130
Query: 140 IRRKKVDPKDQNRSPHEF--------EKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKK 191
+R++ + S E+ E + +KRK++D D G D+ + E+ + KK
Sbjct: 131 VRKRGAREAAKEESSGEWDDSSEKFPEYTSKKRKEKDA---DSSGGDE--QIEDISGLKK 185
Query: 192 PRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGN 251
RVVW+ +LH F+ AVN LG++KAVPK+IL++MNV+GLTRENVASHLQK+RL LKRL
Sbjct: 186 ARVVWSGDLHRLFVKAVNQLGVEKAVPKRILEIMNVQGLTRENVASHLQKYRLGLKRLSG 245
Query: 252 KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGR 307
+E +AS + +S FGGS V G SS ++ G + G+
Sbjct: 246 VDMEPHPIASFQADESG--------SFGGSMFVRPAGSSKSSIARTTSCAGGVFGK 293
>gi|226503033|ref|NP_001152300.1| two-component response regulator ARR11 [Zea mays]
gi|195654849|gb|ACG46892.1| two-component response regulator ARR11 [Zea mays]
Length = 584
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 184/444 (41%), Positives = 237/444 (53%), Gaps = 60/444 (13%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL VDDD T LKILEK LR+C YEVT A A+++LRE RN FD+VISDV M
Sbjct: 9 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQILRERRNKFDIVISDVNM 68
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGFKLLEL+GLEMDLPV+M+S +T VMKG+ HGACDYLLKPVRM+EL+N WQHV
Sbjct: 69 PDMDGFKLLELIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 128
Query: 140 IRRK--KVDPKDQNRSPHEFE--------------------KSYRKRKDQDGEDEDEDGD 177
R+K +V + N S + + + RKRKD + + D+D
Sbjct: 129 YRKKMHEVKEIEGNDSYDDLQMFRNGVEGFDERDLFMRADSDTMRKRKDVNKDHADQDSS 188
Query: 178 DDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVAS 237
D T KK RVVW+ +LH KF+ AVN +G DK PKKILDLMNV GLTRENVAS
Sbjct: 189 D-------GATVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVAS 241
Query: 238 HLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNS-PGRLSSSALS 296
HLQK+RL L RL + E M G+ + + G D S PG LS+
Sbjct: 242 HLQKYRLYLSRLQKQNEERIM----GAARQDFNQKGPSDHLNLRSSFQEQPGNLSNGCQH 297
Query: 297 SSYVPGSMIGRLN-------SSAGLSM---HGIASSGMIKPGLSQSFNTSFNTIGKNQQA 346
SS + L+ +S L + +GI++S + P Q+ T+ G
Sbjct: 298 SSQKVEAQTNILDPHLDDTKTSMPLKVPDKNGISASDAVDP---QNITTASPLSGVFSFE 354
Query: 347 MFPANRNSNL-------VQGVQTSLEPNQMPQSESTTH-----IGDFNHINSP-TAFTAA 393
P N++ L Q S+ P Q Q H +GD++ + P A
Sbjct: 355 RMPVNQDRKLSETMILECQSWIGSVPPKQFMQYPKHNHERCDLLGDYSCLPKPDLEHPIA 414
Query: 394 TGFIDARVAVGSSSSSVSTSLSNL 417
G + A V S S +V + +
Sbjct: 415 PGHLYAPPPVISMSYNVEEDVRDF 438
>gi|356519365|ref|XP_003528343.1| PREDICTED: uncharacterized protein LOC100804937 [Glycine max]
Length = 633
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 142/260 (54%), Positives = 176/260 (67%), Gaps = 16/260 (6%)
Query: 19 KFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
+FP+G+RVL VDDD T LKI+E+ C+Y VT A AL +LRE + FD+V+SDV+
Sbjct: 7 EFPVGLRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVH 66
Query: 79 MPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
MPDMDG+KLLE VGLEMDLPV+M+S S T VMKGI HGACDYL+KPVR EEL+N WQH
Sbjct: 67 MPDMDGYKLLEHVGLEMDLPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQH 126
Query: 139 VIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGE---------------DEDEDGDDDGHEN 183
V+R+ D K+Q+ S + KR + D E +D E+
Sbjct: 127 VVRKFWNDSKEQDNSGSMEDSDQNKRGNDDAEYTSVADAAVVKAPKKRSSLKEEDIELES 186
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFR 243
++ KKPRVVW+ ELH +F+ AVN LGLDKAVPK+IL+LMNV GLTRENVASHLQKFR
Sbjct: 187 DDPAASKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASHLQKFR 246
Query: 244 LSLKRL-GNKTLEAGMVASV 262
L LKRL G + GM+ +V
Sbjct: 247 LYLKRLTGVAQQQNGMLNTV 266
>gi|118790785|tpd|FAA00259.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|222619710|gb|EEE55842.1| hypothetical protein OsJ_04457 [Oryza sativa Japonica Group]
Length = 582
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/251 (58%), Positives = 172/251 (68%), Gaps = 15/251 (5%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL VDDD T LKILEK LR+C YEVT A AL +LRE +N FD+VISDV M
Sbjct: 6 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDVNM 65
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGFKLLE +GLEMDLPV+M+S +T VMKG+ HGACDYLLKPVRM+EL+N WQHV
Sbjct: 66 PDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 125
Query: 140 IRRK--KVDPKDQNRSPHEF-----------EKSYRKRKDQDGEDEDEDGDDDGHENENS 186
R+K +V + N S + EKS R D D + +D D D + E+S
Sbjct: 126 YRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSDTMRKRKDVDKDHADQESS 185
Query: 187 --TTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRL 244
T KK RVVW+ +LH KF+ AVN +G DK PKKILDLMNV GLTRENVASHLQK+RL
Sbjct: 186 DGNTVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVASHLQKYRL 245
Query: 245 SLKRLGNKTLE 255
L RL + E
Sbjct: 246 YLSRLQKQNEE 256
>gi|168015656|ref|XP_001760366.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688380|gb|EDQ74757.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 141/253 (55%), Positives = 177/253 (69%), Gaps = 20/253 (7%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
P G++VL VDDD LKILE+ LREC+Y VT N A AL MLRENR+ FDLVISDVYMP
Sbjct: 12 PAGLKVLVVDDDNVILKILERMLRECKYAVTTCNSATKALAMLRENRSYFDLVISDVYMP 71
Query: 81 DMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
DMDGFKLLE +GLE+DLPV+M+S + VM+GI HGACDYLLKPVR+EEL+N WQHV+
Sbjct: 72 DMDGFKLLEAIGLELDLPVIMMSRDGEIDSVMRGIKHGACDYLLKPVRLEELRNIWQHVV 131
Query: 141 RR------------KKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTT 188
R+ ++D +++ +F+ + RKRK E +D+ E+
Sbjct: 132 RKLVSPILVSKEESGELDEYPKHQDNADFDATSRKRK--------ERLEDETQLVEDVNN 183
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
KK R+VW+ ELH +F+ AVN LG+DKAVP+KILD+MNV+GLTRENVASHLQK+R LKR
Sbjct: 184 LKKARIVWSPELHQQFVNAVNYLGVDKAVPRKILDIMNVQGLTRENVASHLQKYRSYLKR 243
Query: 249 LGNKTLEAGMVAS 261
L T + VAS
Sbjct: 244 LIGVTPQPHPVAS 256
>gi|218189558|gb|EEC71985.1| hypothetical protein OsI_04831 [Oryza sativa Indica Group]
Length = 582
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/251 (58%), Positives = 172/251 (68%), Gaps = 15/251 (5%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL VDDD T LKILEK LR+C YEVT A AL +LRE +N FD+VISDV M
Sbjct: 6 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDVNM 65
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGFKLLE +GLEMDLPV+M+S +T VMKG+ HGACDYLLKPVRM+EL+N WQHV
Sbjct: 66 PDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 125
Query: 140 IRRK--KVDPKDQNRSPHEF-----------EKSYRKRKDQDGEDEDEDGDDDGHENENS 186
R+K +V + N S + EKS R D D + +D D D + E+S
Sbjct: 126 YRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSDTMRKRKDVDKDHADQESS 185
Query: 187 --TTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRL 244
T KK RVVW+ +LH KF+ AVN +G DK PKKILDLMNV GLTRENVASHLQK+RL
Sbjct: 186 DGNTVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVASHLQKYRL 245
Query: 245 SLKRLGNKTLE 255
L RL + E
Sbjct: 246 YLSRLQKQNEE 256
>gi|414879149|tpg|DAA56280.1| TPA: putative two-component response regulator family protein [Zea
mays]
Length = 584
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 155/302 (51%), Positives = 187/302 (61%), Gaps = 34/302 (11%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL VDDD T LKILEK LR+C YEVT A A+++LRE RN FD+VISDV M
Sbjct: 9 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQILRERRNKFDIVISDVNM 68
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGFKLLEL+GLEMDLPV+M+S +T VMKG+ HGACDYLLKPVRM+EL+N WQHV
Sbjct: 69 PDMDGFKLLELIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 128
Query: 140 IRRK--KVDPKDQNRSPHEFE--------------------KSYRKRKDQDGEDEDEDGD 177
R+K +V + N S + + + RKRKD + + D+D
Sbjct: 129 YRKKMHEVKEIEGNDSYDDLQMFRNGVEGFDERDLFMRADSDTMRKRKDVNKDHADQDSS 188
Query: 178 DDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVAS 237
D T KK RVVW+ +LH KF+ AVN +G DK PKKILDLMNV GLTRENVAS
Sbjct: 189 D-------GATVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVAS 241
Query: 238 HLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNS-PGRLSSSALS 296
HLQK+RL L RL + E M G+ + + G D S PG LS+
Sbjct: 242 HLQKYRLYLSRLQKQNEERIM----GAARQDFNQKGPSDHLNLRSSFQEQPGNLSNGCQH 297
Query: 297 SS 298
SS
Sbjct: 298 SS 299
>gi|356502390|ref|XP_003520002.1| PREDICTED: uncharacterized protein LOC100817125 [Glycine max]
Length = 633
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/284 (52%), Positives = 183/284 (64%), Gaps = 33/284 (11%)
Query: 19 KFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
+FP+G+RVL VDDD T LKI+E+ C+Y VT A AL +LRE + FD+V+SDV+
Sbjct: 9 EFPVGLRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVH 68
Query: 79 MPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
MPDMDG+KLLE VGLEMDLPV+M+S S T VMKGI HGACDYL+KPVR EEL+N WQH
Sbjct: 69 MPDMDGYKLLEHVGLEMDLPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQH 128
Query: 139 VIRRKKVDPK-----------DQNR-------------SPHEFEKSYRKRKDQDGEDEDE 174
V+R+ D K D+N+ E K+ +KR ED +
Sbjct: 129 VVRKFWNDNKELDNSGSMEDSDRNKWGNDDAEYTSSVADAAEVVKAPKKRSSLKEEDIEL 188
Query: 175 DGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTREN 234
+ DD T KKPRVVW+ ELH +F+ AVN LGLDKAVPK+IL+LMNV GLTREN
Sbjct: 189 ESDDPA-------TSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTREN 241
Query: 235 VASHLQKFRLSLKRL-GNKTLEAGMVASV-GSKDSSYLRIGALD 276
VASHLQKFRL LKRL G + GM+ ++ G+ +S G D
Sbjct: 242 VASHLQKFRLYLKRLSGVAQQQNGMLNAIPGTIESKLGATGRFD 285
>gi|242085174|ref|XP_002443012.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
gi|241943705|gb|EES16850.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
Length = 551
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/336 (45%), Positives = 212/336 (63%), Gaps = 42/336 (12%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENR--NNFDLVIS 75
D FP G+RVLAVDDD+ CLKILE+ L+ C Y TV + A TAL MLRE + N FDLVIS
Sbjct: 4 DTFPAGLRVLAVDDDRVCLKILERQLKYCNYNATVVSDARTALDMLRERKEGNQFDLVIS 63
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV MP+MDGFKLLEL+GLEMDLPV+MLSA S+T+ +MKGI HGACDY++KPVR+E+L+
Sbjct: 64 DVIMPNMDGFKLLELIGLEMDLPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQLRGI 123
Query: 136 WQHVIRRKKVDPKD----------------------QNRSPHEFEKSYRKRKDQDGEDED 173
W HV++ DP++ ++ + H + S + +K D DED
Sbjct: 124 WTHVVKNSMNDPQNNINSGSDDDVQKLRYGNGDKGMKDGANHRNKYSKKNKKVVDVADED 183
Query: 174 EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
+EN++ QKK RV W +LH KF+ AV+ +G+D+A PKKIL +MNVEGLTRE
Sbjct: 184 ---------SENTSAQKKQRVQWCGQLHQKFVEAVSQIGIDRAAPKKILAIMNVEGLTRE 234
Query: 234 NVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDG--FGGSHSVNSPGRLS 291
NVASHLQK+R+ L++LG+ L ++ + ++ LR G + G F GS +
Sbjct: 235 NVASHLQKYRIYLRKLGDGKLRN---SNPFADETEALR-GNMYGPTFIGSPRSRNHSLPR 290
Query: 292 SSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKP 327
S + +S + G ++G SS G+ IA+ ++ P
Sbjct: 291 SCSSYASILRGKILG---SSRGIPYEDIANGDILAP 323
>gi|168010903|ref|XP_001758143.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690599|gb|EDQ76965.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 239
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 140/242 (57%), Positives = 171/242 (70%), Gaps = 22/242 (9%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
P G++VL VDD+ L I+E+ L+ CQY VT N A AL MLRENRN FDLVISDVYMP
Sbjct: 1 PAGLKVLVVDDEPLALMIVERMLQICQYTVTTCNSATKALAMLRENRNYFDLVISDVYMP 60
Query: 81 DMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
DMDGFKLLE +GLE+DLPV+M+S +T VMKGI HGACDYLLKPVR++EL N WQHV+
Sbjct: 61 DMDGFKLLEAIGLELDLPVIMMSGDGETDSVMKGIRHGACDYLLKPVRLKELINIWQHVV 120
Query: 141 RRKKVDPKD-------------QNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENST 187
RK V P+D +++ +F+ + RKRK E +D E+
Sbjct: 121 -RKLVTPRDIPKEESGEWDEFPKHQDNADFDSTARKRK--------ERSEDVAQLVEDVN 171
Query: 188 TQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLK 247
KK RVVW+ ELH +F+ AVN LG+DKAVP+KILD+MNV+GLTRENVASHLQK+RL LK
Sbjct: 172 NLKKARVVWSAELHQQFVNAVNYLGVDKAVPRKILDIMNVQGLTRENVASHLQKYRLYLK 231
Query: 248 RL 249
RL
Sbjct: 232 RL 233
>gi|297733626|emb|CBI14873.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 139/232 (59%), Positives = 164/232 (70%), Gaps = 14/232 (6%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
+ FP G+RVL VDDD T LKILEK L++C YEVT A AL MLRE ++ FD+VISDV
Sbjct: 11 EAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNMLRERKDGFDIVISDV 70
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
MPDMDGFKLLE VGLEMDLPV+M+S +T VMKG+ HGACDYLLKPVRM+ELKN WQ
Sbjct: 71 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPVRMKELKNIWQ 130
Query: 138 HVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWT 197
HV R+K + KD + RKRKD + D+ E + ++ KK RVVW+
Sbjct: 131 HVFRKKIHEGKDLGAT--------RKRKDMENRRHDD------QELVDPSSSKKARVVWS 176
Query: 198 TELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
+LH KF+ AVN +G DK PKKILDLMNV LTRENVASHLQK+RL L RL
Sbjct: 177 IDLHQKFVDAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRL 228
>gi|125556273|gb|EAZ01879.1| hypothetical protein OsI_23901 [Oryza sativa Indica Group]
Length = 684
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/327 (46%), Positives = 213/327 (65%), Gaps = 14/327 (4%)
Query: 19 KFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
KFP G+RVLAVDD CL +LE LR C+Y+ T+T A TAL+MLRE +FDLVISDV+
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 79 MPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
M DMDGFKLLEL+GLEMDLPV+M SA + + +MKG+ HGACDYL+KPV +++++N WQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 139 VIRRKKVDPKDQNRSPH---EFEKSYRKRKDQDGEDEDEDGDDDGHENEN-STTQKKPRV 194
V R++K+D ++ N + E + R ++ + + DGD+ G EN +T K+ RV
Sbjct: 131 VWRKRKLDIRNHNGGYNDGGELVGATRTKRKYTRKMRN-DGDNYGENKENMDSTLKRQRV 189
Query: 195 VWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTL 254
VWT ELH F+ AV+ LG+D+AVP+KIL +M V+ +TREN+ASHLQK+RL LKR+ +T
Sbjct: 190 VWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENIASHLQKYRLYLKRISTQT- 248
Query: 255 EAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGL 314
GM + Y I LD ++ N RL+ + SSS + R+NS++ L
Sbjct: 249 --GMDPDQFPEKWKY--INELDAL-KNYCENGRYRLTPAIASSSS--SNPFARMNSASAL 301
Query: 315 SMHGIASSGMIKPGLSQSFNTSFNTIG 341
+ +G + ++ SQ N + T+G
Sbjct: 302 ATNGFLPTHSVQLKNSQR-NMAMGTVG 327
>gi|255547918|ref|XP_002515016.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546067|gb|EEF47570.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 584
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/291 (51%), Positives = 187/291 (64%), Gaps = 34/291 (11%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D FP G+RVL VDDD T LKILEK L++C YEVT A AL +LRE ++ +D+VISDV
Sbjct: 11 DAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALYLLRERKDGYDIVISDV 70
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
MPDMDGFKLLE VGLEMDLPV+M+S +T VMKG+ HGACDYLLKP+RM+EL+N WQ
Sbjct: 71 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 130
Query: 138 HVIRRKKVDPKD-------------QNRSPH---------EFEKSYRKRKDQDGEDEDED 175
HV R+K + +D + S H E S +KRKD + + +D+D
Sbjct: 131 HVFRKKIHEVRDIEILEGMESIQMARIGSDHSDDGYLFCGEDLTSVKKRKDIENKHDDKD 190
Query: 176 GDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENV 235
G+ S+T KK RVVW+ +LH KF+ AVN +G DK PKKILDLMNV LTRENV
Sbjct: 191 GE--------SSTTKKARVVWSVDLHQKFVKAVNQIGPDKVGPKKILDLMNVPWLTRENV 242
Query: 236 ASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDG-FGGSHSVN 285
ASHLQK+RL L RL + + + +SS +G G FG +S+N
Sbjct: 243 ASHLQKYRLYLSRLQKENDSKTSIGGIKQSESS---LGESAGSFGTQNSIN 290
>gi|56784051|dbj|BAD82798.1| putative response regulator 11 [Oryza sativa Japonica Group]
Length = 586
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 145/255 (56%), Positives = 171/255 (67%), Gaps = 19/255 (7%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL VDDD T LKILEK LR+C YEVT A AL +LRE +N FD+VISDV M
Sbjct: 6 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDVNM 65
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGFKLLE +GLEMDLPV+M+S +T VMKG+ HGACDYLLKPVRM+EL+N WQHV
Sbjct: 66 PDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 125
Query: 140 IRRK--KVDPKDQNRSPHEF-----------EKSYRKRKDQDGEDEDEDGDDDGHENENS 186
R+K +V + N S + EKS R D D + +D D D + E+S
Sbjct: 126 YRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSDTMRKRKDVDKDHADQESS 185
Query: 187 --TTQKKPRVVWTTELHTKFIGAVNLLGLDKAV----PKKILDLMNVEGLTRENVASHLQ 240
T KK RVVW+ +LH KF+ AVN +G D PKKILDLMNV GLTRENVASHLQ
Sbjct: 186 DGNTVKKARVVWSVDLHQKFVNAVNQIGFDSECSPKGPKKILDLMNVPGLTRENVASHLQ 245
Query: 241 KFRLSLKRLGNKTLE 255
K+RL L RL + E
Sbjct: 246 KYRLYLSRLQKQNEE 260
>gi|118790775|tpd|FAA00258.1| TPA: response regulator [Oryza sativa Japonica Group]
Length = 690
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 150/327 (45%), Positives = 213/327 (65%), Gaps = 14/327 (4%)
Query: 19 KFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
KFP G+RVLAVDD CL +LE LR C+Y+ T+T A TAL+MLRE +FDLVISDV+
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 79 MPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
M DMDGFKLLEL+GLEMDLPV+M SA + + +MKG+ HGACDYL+KPV +++++N WQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 139 VIRRKKVDPKDQNRSPH---EFEKSYRKRKDQDGEDEDEDGDDDGHENEN-STTQKKPRV 194
V R++K+D ++ N + E + R ++ + + DGD+ G EN +T K+ RV
Sbjct: 131 VWRKRKLDIRNHNGGYNDGGELVGATRTKRKYTRKMRN-DGDNYGENKENMDSTLKRQRV 189
Query: 195 VWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTL 254
VWT ELH F+ AV+ LG+D+AVP+KIL +M V+ +TREN+ASHLQK+RL LKR+ +T
Sbjct: 190 VWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENIASHLQKYRLYLKRISTQT- 248
Query: 255 EAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGL 314
GM + Y+ LD ++ N RL+ + SSS + R+NS++ L
Sbjct: 249 --GMDPDQFPEKWKYMN--ELDAL-KNYCENGRYRLTPAIASSSS--SNPFARMNSASAL 301
Query: 315 SMHGIASSGMIKPGLSQSFNTSFNTIG 341
+ +G + ++ SQ N + T+G
Sbjct: 302 ATNGFLPTHSVQLKNSQR-NMAMGTVG 327
>gi|357126386|ref|XP_003564868.1| PREDICTED: uncharacterized protein LOC100824670 [Brachypodium
distachyon]
Length = 577
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 142/258 (55%), Positives = 170/258 (65%), Gaps = 29/258 (11%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL VDDD T LKILEK LR+C YEVT A AL++LRE ++ FD+VISDV M
Sbjct: 8 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALEILRERKSKFDIVISDVNM 67
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGFKLLE +GLEMDLPV+M+S +T VMKG+ HGACDYLLKPVRM+EL+N WQHV
Sbjct: 68 PDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 127
Query: 140 IRRKKVDPK---------DQNRSPHEFE-------------KSYRKRKDQDGEDEDEDGD 177
R++ + K D + FE + RKRKD D + D+D
Sbjct: 128 YRKRMHEVKEIEGHDSCDDLQILRYGFEGFDEKGIFITADSDTTRKRKDLDKDHADQDSS 187
Query: 178 DDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVAS 237
D T KK RVVW+ +LH KF+ AVN +G DK PKKILDLMNV G+TRENVAS
Sbjct: 188 D-------GATAKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGITRENVAS 240
Query: 238 HLQKFRLSLKRLGNKTLE 255
HLQK+RL L RL + E
Sbjct: 241 HLQKYRLYLGRLQKQNEE 258
>gi|297606271|ref|NP_001058204.2| Os06g0647200 [Oryza sativa Japonica Group]
gi|255677276|dbj|BAF20118.2| Os06g0647200 [Oryza sativa Japonica Group]
Length = 663
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 150/327 (45%), Positives = 213/327 (65%), Gaps = 14/327 (4%)
Query: 19 KFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
KFP G+RVLAVDD CL +LE LR C+Y+ T+T A TAL+MLRE +FDLVISDV+
Sbjct: 26 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 85
Query: 79 MPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
M DMDGFKLLEL+GLEMDLPV+M SA + + +MKG+ HGACDYL+KPV +++++N WQH
Sbjct: 86 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 145
Query: 139 VIRRKKVDPKDQNRSPH---EFEKSYRKRKDQDGEDEDEDGDDDGHENEN-STTQKKPRV 194
V R++K+D ++ N + E + R ++ + + DGD+ G EN +T K+ RV
Sbjct: 146 VWRKRKLDIRNHNGGYNDGGELVGATRTKRKYTRKMRN-DGDNYGENKENMDSTLKRQRV 204
Query: 195 VWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTL 254
VWT ELH F+ AV+ LG+D+AVP+KIL +M V+ +TREN+ASHLQK+RL LKR+ +T
Sbjct: 205 VWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENIASHLQKYRLYLKRISTQT- 263
Query: 255 EAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGL 314
GM + Y+ LD ++ N RL+ + SSS + R+NS++ L
Sbjct: 264 --GMDPDQFPEKWKYMN--ELDAL-KNYCENGRYRLTPAIASSS--SSNPFARMNSASAL 316
Query: 315 SMHGIASSGMIKPGLSQSFNTSFNTIG 341
+ +G + ++ SQ N + T+G
Sbjct: 317 ATNGFLPTHSVQLKNSQR-NMAMGTVG 342
>gi|51535423|dbj|BAD37322.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|51535645|dbj|BAD37619.1| putative response regulator 9 [Oryza sativa Japonica Group]
Length = 694
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 150/327 (45%), Positives = 213/327 (65%), Gaps = 14/327 (4%)
Query: 19 KFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
KFP G+RVLAVDD CL +LE LR C+Y+ T+T A TAL+MLRE +FDLVISDV+
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 79 MPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
M DMDGFKLLEL+GLEMDLPV+M SA + + +MKG+ HGACDYL+KPV +++++N WQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 139 VIRRKKVDPKDQNRSPH---EFEKSYRKRKDQDGEDEDEDGDDDGHENEN-STTQKKPRV 194
V R++K+D ++ N + E + R ++ + + DGD+ G EN +T K+ RV
Sbjct: 131 VWRKRKLDIRNHNGGYNDGGELVGATRTKRKYTRKMRN-DGDNYGENKENMDSTLKRQRV 189
Query: 195 VWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTL 254
VWT ELH F+ AV+ LG+D+AVP+KIL +M V+ +TREN+ASHLQK+RL LKR+ +T
Sbjct: 190 VWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENIASHLQKYRLYLKRISTQT- 248
Query: 255 EAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGL 314
GM + Y+ LD ++ N RL+ + SSS + R+NS++ L
Sbjct: 249 --GMDPDQFPEKWKYMN--ELDAL-KNYCENGRYRLTPAIASSSS--SNPFARMNSASAL 301
Query: 315 SMHGIASSGMIKPGLSQSFNTSFNTIG 341
+ +G + ++ SQ N + T+G
Sbjct: 302 ATNGFLPTHSVQLKNSQR-NMAMGTVG 327
>gi|125598040|gb|EAZ37820.1| hypothetical protein OsJ_22159 [Oryza sativa Japonica Group]
Length = 713
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 150/327 (45%), Positives = 213/327 (65%), Gaps = 14/327 (4%)
Query: 19 KFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
KFP G+RVLAVDD CL +LE LR C+Y+ T+T A TAL+MLRE +FDLVISDV+
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 79 MPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
M DMDGFKLLEL+GLEMDLPV+M SA + + +MKG+ HGACDYL+KPV +++++N WQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 139 VIRRKKVDPKDQNRSPH---EFEKSYRKRKDQDGEDEDEDGDDDGHENEN-STTQKKPRV 194
V R++K+D ++ N + E + R ++ + + DGD+ G EN +T K+ RV
Sbjct: 131 VWRKRKLDIRNHNGGYNDGGELVGATRTKRKYTRKMRN-DGDNYGENKENMDSTLKRQRV 189
Query: 195 VWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTL 254
VWT ELH F+ AV+ LG+D+AVP+KIL +M V+ +TREN+ASHLQK+RL LKR+ +T
Sbjct: 190 VWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENIASHLQKYRLYLKRISTQT- 248
Query: 255 EAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGL 314
GM + Y+ LD ++ N RL+ + SSS + R+NS++ L
Sbjct: 249 --GMDPDQFPEKWKYMN--ELDAL-KNYCENGRYRLTPAIASSSS--SNPFARMNSASAL 301
Query: 315 SMHGIASSGMIKPGLSQSFNTSFNTIG 341
+ +G + ++ SQ N + T+G
Sbjct: 302 ATNGFLPTHSVQLKNSQR-NMAMGTVG 327
>gi|449450407|ref|XP_004142954.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
gi|449494494|ref|XP_004159561.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
Length = 583
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/276 (53%), Positives = 179/276 (64%), Gaps = 35/276 (12%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D FPIG+RVL VDDD T LKILEK L++C YEVT A AL +LRE ++ +D+VISDV
Sbjct: 11 DVFPIGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLAREALSLLRERKDGYDIVISDV 70
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
MPDMDGFKLLE VGLEMDLPV+M+S +T VMKG+ HGACDYLLKP+RM+EL+N WQ
Sbjct: 71 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 130
Query: 138 HVIRRKKVDPKDQN------------------------RSPHEFEKSYRKRKDQDGEDED 173
HV+R+K + +D R F S RKRKD D + ED
Sbjct: 131 HVLRKKIQEGRDIEGHDVIEGIHILRNVADRYDDSQFLRGEEPF--SVRKRKDID-KHED 187
Query: 174 EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
+D D +++ KK RVVW+ ELH KF+ AVN +G DK PKKILDLMNV LTRE
Sbjct: 188 KDFCD-------TSSTKKARVVWSVELHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRE 240
Query: 234 NVASHLQKFRLSLKRLGNKT-LEAGMVASVGSKDSS 268
NVASHLQK+RL L RL + +A V + KDS
Sbjct: 241 NVASHLQKYRLYLSRLQKENDPKACFVVGMKPKDSC 276
>gi|225425924|ref|XP_002267616.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
gi|297738324|emb|CBI27525.3| unnamed protein product [Vitis vinifera]
Length = 594
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/253 (54%), Positives = 170/253 (67%), Gaps = 28/253 (11%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D FP G+RVL VDDD T LKILEK L++C YEVT+ A AL +LRE ++ +D+VISDV
Sbjct: 11 DVFPAGLRVLVVDDDPTWLKILEKMLKKCLYEVTICGLARDALNLLRERKDGYDIVISDV 70
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
MPDMDGFKLLELVGLEMDLPV+M+S +T VMKG+ HGACDYLLKP+RM+EL+N WQ
Sbjct: 71 NMPDMDGFKLLELVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 130
Query: 138 HVIRRKKVDPKD------------QNRSPHEFEKSY---------RKRKDQDGEDEDEDG 176
HV R+K + +D P + + Y +KRKD + + +D D
Sbjct: 131 HVFRKKINEVRDIESHESIDDFQIMRNGPEQSDDGYLVSGDPTSVKKRKDTENKHDDRDH 190
Query: 177 DDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVA 236
D ++ KK RVVW+ +LH KF+ AVN +G DK PKKILDLMNV LTRENVA
Sbjct: 191 CD-------PSSVKKARVVWSVDLHQKFVRAVNQIGFDKVGPKKILDLMNVPWLTRENVA 243
Query: 237 SHLQKFRLSLKRL 249
SHLQK+RL L RL
Sbjct: 244 SHLQKYRLYLSRL 256
>gi|356510875|ref|XP_003524159.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 584
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/267 (51%), Positives = 173/267 (64%), Gaps = 17/267 (6%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D FP G+RVL VDDD T L+ILEK L++C YEVT A ALK LRE ++ +D+VISDV
Sbjct: 12 DAFPAGLRVLVVDDDPTWLRILEKMLKKCLYEVTTCCLATEALKKLRERKDAYDIVISDV 71
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
MPDMDGFKLLE VGLEMDLPV+M+S +T VMKG+ HGACDYLLKP+RM+EL+N WQ
Sbjct: 72 NMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
Query: 138 HVIRRKKVDPKD-QNRSPHEFEKSYRKRKDQDGEDE----------------DEDGDDDG 180
HV R++ + +D ++ +FE + R D D+ D D D
Sbjct: 132 HVFRKRMHEARDFESHEGFDFEGIHLMRNGSDHSDDGNLFAVEEITSIKKRKDADNKHDD 191
Query: 181 HENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
E + + KK RVVW+ +LH KF+ AVN +G DK PKKILDLMNV LTRENVASHLQ
Sbjct: 192 KEFGDHSPMKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 251
Query: 241 KFRLSLKRLGNKTLEAGMVASVGSKDS 267
K+RL L RL + + + + DS
Sbjct: 252 KYRLYLSRLQKENDQKSSSSGIKHSDS 278
>gi|168062796|ref|XP_001783363.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665113|gb|EDQ51808.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/261 (53%), Positives = 175/261 (67%), Gaps = 25/261 (9%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP+GMRVL VDDD TCL +LE+ L C Y VT RA AL +LRE+ FDLVISDV
Sbjct: 6 DEFPVGMRVLVVDDDPTCLVLLERMLILCSYRVTTCGRATDALLLLREDIGKFDLVISDV 65
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
MPDMDGFKLLELVGLEMDLPV+M+S +T VM+G+ HGACDYL+KPV ++EL+N WQ
Sbjct: 66 DMPDMDGFKLLELVGLEMDLPVIMMSGNGETSAVMEGVIHGACDYLIKPVGIKELRNVWQ 125
Query: 138 HVIRRKKVDPKDQN-RSPHEFEKSYRKRKDQDGEDED--------EDGDDDGHENENS-- 186
HV+R+K+ + K + +S E R+++ +D D DG+ +
Sbjct: 126 HVVRKKRQEVKAVSMKSIEEAGGCERQKRAGGADDADYTSSATDTTDGNWKLSKRRKGEF 185
Query: 187 --------------TTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTR 232
+T KKPRVVW+ ELH +F+ AVN LG+DKAVPK+IL+LM V+GLTR
Sbjct: 186 KEENEDDNEENDDPSTMKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMGVQGLTR 245
Query: 233 ENVASHLQKFRLSLKRLGNKT 253
ENVASHLQK+RL LKRL T
Sbjct: 246 ENVASHLQKYRLYLKRLSGVT 266
>gi|225456769|ref|XP_002274673.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
Length = 570
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 143/255 (56%), Positives = 170/255 (66%), Gaps = 30/255 (11%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
+ FP G+RVL VDDD T LKILEK L++C YEVT A AL MLRE ++ FD+VISDV
Sbjct: 11 EAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNMLRERKDGFDIVISDV 70
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
MPDMDGFKLLE VGLEMDLPV+M+S +T VMKG+ HGACDYLLKPVRM+ELKN WQ
Sbjct: 71 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPVRMKELKNIWQ 130
Query: 138 HVIRRKKVDPKD-------------QNRSPHEFEKSY----------RKRKDQDGEDEDE 174
HV R+K + KD +RS EF+ + RKRKD + D+
Sbjct: 131 HVFRKKIHEGKDVESYECMREIQMIMSRS-DEFDDGHQLNGGELGATRKRKDMENRRHDD 189
Query: 175 DGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTREN 234
E + ++ KK RVVW+ +LH KF+ AVN +G DK PKKILDLMNV LTREN
Sbjct: 190 ------QELVDPSSSKKARVVWSIDLHQKFVDAVNQIGFDKVGPKKILDLMNVPWLTREN 243
Query: 235 VASHLQKFRLSLKRL 249
VASHLQK+RL L RL
Sbjct: 244 VASHLQKYRLYLSRL 258
>gi|356569201|ref|XP_003552793.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 557
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/249 (55%), Positives = 167/249 (67%), Gaps = 26/249 (10%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL VDDD T LKILEK L++C YEVT A AL +LRE ++ +D+VISDV M
Sbjct: 13 FPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNM 72
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGFKLLE VGLEMDLPV+M+S +T VMKG+ HGACDYLLKP+RM+EL+N WQHV
Sbjct: 73 PDMDGFKLLEHVGLEMDLPVIMMSVDGETSKVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 140 IRRKKVDPK-------------------DQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDG 180
R+K + K D N E S +KRKD D + +D++ D
Sbjct: 133 FRKKIHEAKEFESFESIHLMRNGSELSDDGNLFAVEDVTSSKKRKDADSKHDDKECLD-- 190
Query: 181 HENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
++ KK RVVW+ +LH KF+ AVN +G DK PKKILDLMNV LTRENVASHLQ
Sbjct: 191 -----PSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 245
Query: 241 KFRLSLKRL 249
K+RL L R+
Sbjct: 246 KYRLYLSRI 254
>gi|168002194|ref|XP_001753799.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695206|gb|EDQ81551.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 311
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 134/254 (52%), Positives = 169/254 (66%), Gaps = 28/254 (11%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D FP G+RVL VDD+ L +LEK L C Y VT RA AL +LRE+ + FDLVISDV
Sbjct: 44 DAFPAGLRVLVVDDEPVTLMVLEKMLTNCSYRVTTCGRATDALCLLREDIDKFDLVISDV 103
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
MPDMDGFKLLELVGLEMDLPV+M+S +T VMKGI HGACDYLLKPVR +EL+N WQ
Sbjct: 104 NMPDMDGFKLLELVGLEMDLPVIMMSGNGETSAVMKGITHGACDYLLKPVRQKELRNIWQ 163
Query: 138 HVIRRKKVDPK----------------DQNRSPHEFEKS------------YRKRKDQDG 169
HV+R+++ D K ++ P + + + +KRK ++
Sbjct: 164 HVVRKRRQDVKIARETKSVEEGGVCVREKRTGPDDVDYTSSATGDTGDGNWRKKRKGENQ 223
Query: 170 EDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEG 229
+DE +D EN++ +T KKPRVVW+ ELH +F+ AVN LG+D+AVPK+IL+LM V G
Sbjct: 224 TFKDETEEDVEQENDDPSTMKKPRVVWSVELHQQFVSAVNQLGIDRAVPKRILELMGVHG 283
Query: 230 LTRENVASHLQKFR 243
LTRENVASHLQ R
Sbjct: 284 LTRENVASHLQVIR 297
>gi|413951616|gb|AFW84265.1| putative two-component response regulator family protein [Zea mays]
Length = 598
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 144/277 (51%), Positives = 177/277 (63%), Gaps = 42/277 (15%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAI------------------TALK 61
FP G+RVL VDDD T LKILEK LR+C YE +++R + AL+
Sbjct: 9 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEDAMSDRTVIARTGGISSCVTTCGLASVALQ 68
Query: 62 MLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVV----------MLSAYSDTKLV 111
+LRE RN FD+VISDV MPDMDGFKLLEL+GLEMDLPV+ ++S +T V
Sbjct: 69 ILRERRNKFDIVISDVNMPDMDGFKLLELIGLEMDLPVISTKLLQSVSTVMSIDGETSRV 128
Query: 112 MKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHE---FEK----SYRKR 164
MKG++HGACDYLLKPVRM+EL+N WQHV R+K + K+ E F + + RKR
Sbjct: 129 MKGVHHGACDYLLKPVRMKELRNIWQHVYRKKMHEVKEIEDGLDERGLFMRADTDTMRKR 188
Query: 165 KDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDL 224
K+ D + D+D D T KK RVVW+ +LH KF+ AVN +G DK PKKILDL
Sbjct: 189 KEVDKDHADQDSSD-------GATAKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDL 241
Query: 225 MNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVAS 261
MNV GLTRENVASHLQK+RL L RL + E M A+
Sbjct: 242 MNVHGLTRENVASHLQKYRLYLSRLQKQNEERIMGAA 278
>gi|312282885|dbj|BAJ34308.1| unnamed protein product [Thellungiella halophila]
Length = 380
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 132/253 (52%), Positives = 176/253 (69%), Gaps = 21/253 (8%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
+ D+FP G+RVL VDDD +CL+ILE+ L Y+VT+ ++A AL +LRE + FDLV+S
Sbjct: 3 ISDQFPSGLRVLVVDDDTSCLRILEQMLLRLMYQVTICSQADVALNILRERKGCFDLVLS 62
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV+MP M+G+KLL+ VGLEMDLPV+M+S T VMKGINHGACDYL+KP+R EELKN
Sbjct: 63 DVHMPGMNGYKLLQQVGLEMDLPVIMMSVDGRTTTVMKGINHGACDYLIKPIRPEELKNI 122
Query: 136 WQHVIRRKKVDPKDQNRSPHEFE-------------------KSYRKRKDQDGEDEDEDG 176
WQHV+RRK K+ R+ E + + RK++ D +++
Sbjct: 123 WQHVVRRKWTMNKELQRNSQALEDNKNSSSSLETVFSVSECSEESKLRKNKRRVDREDNE 182
Query: 177 DDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVA 236
+DD + N++ KK RVVW+ ELH +F AVN LG++KAVPK+IL+LMNV GL+RENVA
Sbjct: 183 EDDLLDPGNNS--KKSRVVWSIELHQQFASAVNHLGIEKAVPKRILELMNVPGLSRENVA 240
Query: 237 SHLQKFRLSLKRL 249
SHLQK+RL L+RL
Sbjct: 241 SHLQKYRLYLRRL 253
>gi|356538109|ref|XP_003537547.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 585
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 136/252 (53%), Positives = 168/252 (66%), Gaps = 29/252 (11%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL VDDD T LKILEK L++C YEVT A AL +LRE ++ +D+VISDV M
Sbjct: 13 FPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNM 72
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGFKLLE VGLEMDLPV+M+S +T VMKG+ HGACDYLLKP+RM+EL+N WQHV
Sbjct: 73 PDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 140 IRRKKVDPK----------------------DQNRSPHEFEKSYRKRKDQDGEDEDEDGD 177
+R++ + K D N E S +KRKD D + +D++
Sbjct: 133 LRKRIHEAKEFESFESFESIHLMRNGSELSDDGNLFAVEDVTSTKKRKDADNKHDDKECL 192
Query: 178 DDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVAS 237
D ++ KK RVVW+ +LH KF+ AVN +G DK PKKILDLMNV LTRENVAS
Sbjct: 193 D-------PSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVAS 245
Query: 238 HLQKFRLSLKRL 249
HLQK+RL L R+
Sbjct: 246 HLQKYRLYLSRI 257
>gi|224110806|ref|XP_002315642.1| type-b response regulator [Populus trichocarpa]
gi|222864682|gb|EEF01813.1| type-b response regulator [Populus trichocarpa]
Length = 250
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/254 (54%), Positives = 169/254 (66%), Gaps = 29/254 (11%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D FP G+RVL VDDD T LKILEK L+ C YEVT A AL +LRE + +D+VISDV
Sbjct: 4 DSFPAGLRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRERKGGYDIVISDV 63
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
YMPDMDGFKLLE VGLEMDLPV+M+S +T VMKG+ HGACDYLLKP+RM+EL+N WQ
Sbjct: 64 YMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 123
Query: 138 HVIRRKKVDPKD-----------QNRSPHEFEKS-----------YRKRKDQDGEDEDED 175
HV R+K + +D R+ + + +KRKD + + +++D
Sbjct: 124 HVFRKKIHEVRDIEILEGIESFQMTRNGSDLYEDGHFLCGEDLTLIKKRKDIESKHDEKD 183
Query: 176 GDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENV 235
D +T+ KK RVVW+ ELH KF+ AVN +G DK PKKILDLMNV LTRENV
Sbjct: 184 IGD-------NTSAKKARVVWSVELHQKFVKAVNQIGFDKVGPKKILDLMNVPRLTRENV 236
Query: 236 ASHLQKFRLSLKRL 249
ASHLQK+RL L RL
Sbjct: 237 ASHLQKYRLYLSRL 250
>gi|109631200|gb|ABG35776.1| SRR380 [Striga asiatica]
Length = 432
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 169/380 (44%), Positives = 217/380 (57%), Gaps = 69/380 (18%)
Query: 79 MPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
MPDMDGFKLLE VGLEMDLPV+MLSA SD KLVMKG+ HGACDYL+KPVR+EEL+N WQH
Sbjct: 1 MPDMDGFKLLEQVGLEMDLPVIMLSANSDPKLVMKGVTHGACDYLVKPVRIEELRNIWQH 60
Query: 139 VIRRKKVDPKDQNRS-----PHEF-----------------EKSYRKRKDQDGEDEDEDG 176
VIRRKK K++N+S P++ + + RKRKD DE+
Sbjct: 61 VIRRKKFVSKNENKSADQSKPNQASGEGQGGAIPDNGDQNGKTNVRKRKD------DENV 114
Query: 177 DDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVA 236
+DG+ENE+ TQKKPRVVW+ ELH KF+ AVN LG++KAVPK+ILDLMNV GLTRENVA
Sbjct: 115 SEDGNENEDPATQKKPRVVWSIELHRKFVAAVNQLGIEKAVPKRILDLMNVNGLTRENVA 174
Query: 237 SHLQKFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSAL 295
SHLQK+RL LKR+ + +A M A+ G KDS ++R+G G +A
Sbjct: 175 SHLQKYRLYLKRISSVAAQQANMAAAFGVKDSPFIRMGPFSGL-------------PNAA 221
Query: 296 SSSYVPGSMIGRLNSSAGLSM-HGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRNS 354
Y G M+GR+N +++ I+ S I S N +GK P N
Sbjct: 222 FPHYSSGGMLGRINPPTNMNLIRDISPSAFIP-------TNSLNALGK-----MP---NP 266
Query: 355 NLVQGVQTSLEPNQMPQ----SESTTHIGDF-----NHINSPTAFTAATGFIDARVAVGS 405
NL G+Q SLE + Q S G+F N + P +F + I+ V
Sbjct: 267 NLFPGIQLSLELDSNKQGAVGGPSNVVNGNFQQTLSNGLFGPESFGVNS--IETSSVVQP 324
Query: 406 SSSSVSTSLSNLMMLQANPH 425
++S +S NL M P+
Sbjct: 325 NNSLISGQPFNLAMNSGEPY 344
>gi|168004846|ref|XP_001755122.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693715|gb|EDQ80066.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 133/249 (53%), Positives = 163/249 (65%), Gaps = 26/249 (10%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP+GMRVL VDD+ TCL ILE+ L C Y VT +A AL MLRE+ FD+VISDV
Sbjct: 48 DEFPVGMRVLVVDDNPTCLMILEQMLVRCAYRVTTCGKATEALSMLREDIGKFDVVISDV 107
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
MPDMDGFKLLELVGLEMDLPV+M+S +T VMKGI HGACDYLLKPVR+EEL+N WQ
Sbjct: 108 DMPDMDGFKLLELVGLEMDLPVIMVSGNGETSAVMKGITHGACDYLLKPVRIEELRNIWQ 167
Query: 138 HVIRRKKVDPKD-QNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENEN----------- 185
HV+R+K+ + K +S E R ++ +D D + N
Sbjct: 168 HVVRKKRREVKAVATKSVEEAGGCERPKRGGGADDADYTSSATDTTDSNWKLTKRRKGEF 227
Query: 186 --------------STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLT 231
+T K+PRVVW+ ELH +F+ AVN LG+DKAVPK+IL+LM V+GLT
Sbjct: 228 KDENEEDNEQENDDPSTLKRPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMGVQGLT 287
Query: 232 RENVASHLQ 240
RENVASHLQ
Sbjct: 288 RENVASHLQ 296
>gi|145340805|ref|XP_001415508.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575731|gb|ABO93800.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 270
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/259 (50%), Positives = 169/259 (65%), Gaps = 27/259 (10%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+ VL VDDD CLK++EK L+ C+Y+VT + A TAL++LR + FD+V+SDV+M
Sbjct: 1 FPAGLGVLVVDDDLLCLKVVEKMLKACKYKVTACSTAKTALEILRTRKEEFDIVLSDVHM 60
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGFKLLE++ E+ LPV+M+SA SD+ +V++GI HGA DYLLKPVR+EEL+N WQHV
Sbjct: 61 PDMDGFKLLEIIQFELALPVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELRNIWQHV 120
Query: 140 IRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENE--------------- 184
+RR K E ++ K + E+ D E
Sbjct: 121 VRRDYSSAKSSGSEDVEASSPSKRAKTSGSNSKSEEVDRTASEMSSGKARKKPTGKKGGK 180
Query: 185 -----------NSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
+++ KKPRVVW+ ELH +F+ AVN LG+DKAVPK+ILDLM V+GLTRE
Sbjct: 181 SVKEAEKKDVVDNSNSKKPRVVWSAELHAQFVTAVNQLGIDKAVPKRILDLMGVQGLTRE 240
Query: 234 NVASHLQKFRLSLKRL-GN 251
NVASHLQK+RL LKRL GN
Sbjct: 241 NVASHLQKYRLYLKRLQGN 259
>gi|357463135|ref|XP_003601849.1| Response regulator [Medicago truncatula]
gi|355490897|gb|AES72100.1| Response regulator [Medicago truncatula]
Length = 570
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 134/246 (54%), Positives = 165/246 (67%), Gaps = 17/246 (6%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL VDDD T LKILEK L++C YEVT A AL +LRE ++ +D+VISDV M
Sbjct: 13 FPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNM 72
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGFKLLE VGLEMDLPV+M+S +T VMKG+ HGACDYLLKP+RM+EL+N WQHV
Sbjct: 73 PDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 140 IRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDE----------------DEDGDDDGHEN 183
RK++ + + FE + R + +E D D D E
Sbjct: 133 F-RKRIHEVREFENFESFESMHLMRNGSEMSEEGNLFALEDMTSTKKRKDVDSRHDDKEF 191
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFR 243
+S++ KK RVVW+ +LH KF+ AVN +G DK PKKILDLMNV L+RENVASHLQK+R
Sbjct: 192 LDSSSSKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLSRENVASHLQKYR 251
Query: 244 LSLKRL 249
L L RL
Sbjct: 252 LYLSRL 257
>gi|225437477|ref|XP_002269371.1| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 519
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/257 (50%), Positives = 172/257 (66%), Gaps = 16/257 (6%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
M E GS S V +FP G+RVLAVDDDQTCL+I+ + L C Y+VT A AL
Sbjct: 1 MNVETGEGSMSVTAAVPLQFPEGIRVLAVDDDQTCLQIMGRMLERCMYKVTKCRNAEEAL 60
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+LRE+ + FD+V+SD++MPD+ G KLLE++GLEMD+PVVM+S+ + +MKGI HGAC
Sbjct: 61 SLLREDSSRFDIVLSDLHMPDISGLKLLEIIGLEMDMPVVMMSSDEKRETIMKGIIHGAC 120
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSP--------HEFEKSYRKRKDQDGEDE 172
DY +KPVRM+ ++ WQHVIR+++ K+ + E +S +++KD++ E E
Sbjct: 121 DYWVKPVRMDAIQLVWQHVIRKRRNGLKEMEHAMEDDVEGGNEEGSRSMKRKKDREDEGE 180
Query: 173 DEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTR 232
N TT KKPR+VWT LH +F+ AVN LG KAVPKKIL+ MN+ GLTR
Sbjct: 181 S--------RNAMPTTVKKPRMVWTPALHQQFVAAVNQLGYSKAVPKKILEQMNLPGLTR 232
Query: 233 ENVASHLQKFRLSLKRL 249
ENVASHLQKFRL L R+
Sbjct: 233 ENVASHLQKFRLYLSRV 249
>gi|388504468|gb|AFK40300.1| unknown [Medicago truncatula]
Length = 570
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 133/246 (54%), Positives = 164/246 (66%), Gaps = 17/246 (6%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL VDDD T LKILEK L++C YEVT A AL +LRE ++ +D+VISDV M
Sbjct: 13 FPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNM 72
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGFKLL VGLEMDLPV+M+S +T VMKG+ HGACDYLLKP+RM+EL+N WQHV
Sbjct: 73 PDMDGFKLLGHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 140 IRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDE----------------DEDGDDDGHEN 183
RK++ + + FE + R + +E D D D E
Sbjct: 133 F-RKRIHEAREFENFESFESMHLMRNGSEMSEEGNLFALEDMTSTKKRKDVDSRHDDKEF 191
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFR 243
+S++ KK RVVW+ +LH KF+ AVN +G DK PKKILDLMNV L+RENVASHLQK+R
Sbjct: 192 LDSSSSKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLSRENVASHLQKYR 251
Query: 244 LSLKRL 249
L L RL
Sbjct: 252 LYLSRL 257
>gi|298103728|emb|CBM42565.1| putative B-type response regulator 14 [Populus x canadensis]
Length = 594
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 144/305 (47%), Positives = 179/305 (58%), Gaps = 43/305 (14%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D FP G+RVL VDDD T LKILEK L++C YEVT A AL +LRE + +D+VISDV
Sbjct: 12 DSFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLLRERKGGYDIVISDV 71
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
YMPDMDGFKLLE VGLEMDLPV+M+S +T VMKG+ HGACDYLLKP+RM+EL+N WQ
Sbjct: 72 YMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
Query: 138 HVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDG-------------------DD 178
HV R+K + +D E+ + ++G D+ EDG
Sbjct: 132 HVFRKKIHEVRDI----ETLERVESFQMTRNGSDQYEDGHVLCGEDLTSIKKRKHFESKH 187
Query: 179 DGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLD------------------KAVPKK 220
D + +S + KK RVVW+ +LH KF+ AVN +G D + PKK
Sbjct: 188 DEKDTGDSISTKKARVVWSVDLHQKFVKAVNQIGFDTTSLPSFDGAMTGSVCLAEVGPKK 247
Query: 221 ILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGG 280
ILD+MNV LTRENVASHLQK+RL L RL + DS LR A FG
Sbjct: 248 ILDMMNVPWLTRENVASHLQKYRLYLSRLQKENDFKNPAGGTKQSDSP-LRDSA-RSFGS 305
Query: 281 SHSVN 285
+S+N
Sbjct: 306 QNSIN 310
>gi|298103724|emb|CBM42563.1| putative B-type response regulator 21 [Populus x canadensis]
Length = 563
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/305 (47%), Positives = 179/305 (58%), Gaps = 43/305 (14%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D FP G+RVL VDDD T LKILEK L+ C YEVT A AL +LRE + +D+VISDV
Sbjct: 11 DSFPAGLRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRERKGGYDIVISDV 70
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+MPDMDGFKLLE VGLEMDLPV+M+S +T VMKG+ HGACDYLLKP+RM+EL+N WQ
Sbjct: 71 FMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 130
Query: 138 HVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDG-------------------DD 178
HV R+K + +D E + ++G D+ EDG
Sbjct: 131 HVFRKKIHEVRDI----EILEGIESFQMTRNGSDQYEDGHFLCGEDLTLIKKRKDIESKH 186
Query: 179 DGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLD------------------KAVPKK 220
D +N ++T+ KK RVVW+ ELH KF+ AVN +G D + PKK
Sbjct: 187 DEKDNGDNTSAKKARVVWSVELHQKFVKAVNQIGFDTTSLSCFYRAMTSNVCLAEVGPKK 246
Query: 221 ILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGG 280
ILDLMNV LTRENVASHLQK+RL L RL V + DS ++ FG
Sbjct: 247 ILDLMNVPRLTRENVASHLQKYRLYLSRLQKGNDFNNPVGMIKQSDSPL--SDSVGSFGS 304
Query: 281 SHSVN 285
+S+N
Sbjct: 305 QNSIN 309
>gi|159485404|ref|XP_001700734.1| hypothetical protein CHLREDRAFT_113139 [Chlamydomonas reinhardtii]
gi|158281233|gb|EDP06988.1| predicted protein, partial [Chlamydomonas reinhardtii]
Length = 235
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 122/235 (51%), Positives = 161/235 (68%), Gaps = 13/235 (5%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+R+L VDDD CLK++E+ LR+C YEVTV + A TAL +LR+ +DLV+SDVYM
Sbjct: 1 FPAGLRLLVVDDDPLCLKVVEQMLRKCSYEVTVCSNATTALNILRDKNTEYDLVLSDVYM 60
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDMDGF+LLELVGLEMDLPV+M+S+ DT V++G+ HGACDYL+KPVR+EEL+N WQHV
Sbjct: 61 PDMDGFRLLELVGLEMDLPVIMMSSNGDTSNVLRGVTHGACDYLIKPVRLEELRNLWQHV 120
Query: 140 I-------------RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENS 186
+ R ++V P ++ + +Q + G +
Sbjct: 121 VRRRRQRKADAAGQRERRVGPLGGGACVRRVNRAQPSKLNQGHVQRERGRGRVGKAPLLN 180
Query: 187 TTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQK 241
+ KK RVVW+ E+H +F+ AVN LG+DKAVPKKIL++M V+GLTRENVASHLQK
Sbjct: 181 GSNKKARVVWSVEMHQQFVNAVNQLGIDKAVPKKILEIMGVDGLTRENVASHLQK 235
>gi|255636387|gb|ACU18532.1| unknown [Glycine max]
Length = 220
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 131/216 (60%), Positives = 158/216 (73%), Gaps = 26/216 (12%)
Query: 13 EDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDL 72
EDG D+FP+GMRVLAVDDD CLK+LE LR+CQY VT TN+A+ AL MLRENRN FDL
Sbjct: 8 EDGGCDRFPVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTMLRENRNKFDL 67
Query: 73 VISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEEL 132
VISDV MPD+DGFKLLELVGLEMDLPV+MLSA+ DTKLVMKG+ HGACDYLLKPVR+EEL
Sbjct: 68 VISDVNMPDIDGFKLLELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEEL 127
Query: 133 KNTWQHVIRRKKVDPKDQNRSPHEFEKSY-----------------------RKRKDQDG 169
KN WQHV+RRK D +DQN++ +E EK+ +KRKDQ
Sbjct: 128 KNIWQHVVRRKNFDSRDQNKASNE-EKAPNFAGGGSQGLRSENSADQNKRLGKKRKDQSD 186
Query: 170 EDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFI 205
E+E+ + ++E+ + QKK RVVW+ ELH KF+
Sbjct: 187 EEEEGGE--ENEDDEDPSAQKKARVVWSVELHRKFV 220
>gi|307107757|gb|EFN55999.1| hypothetical protein CHLNCDRAFT_30989, partial [Chlorella
variabilis]
Length = 334
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 126/237 (53%), Positives = 163/237 (68%), Gaps = 18/237 (7%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR---ENRNNFDLVISDV 77
P G++VL VDDD CLK++ L+ C YEV AL +LR E+ + FDLV+SDV
Sbjct: 31 PSGLKVLVVDDDPMCLKVVSAMLQRCNYEVDTRTSGQDALLLLRDRQEHNHQFDLVLSDV 90
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
YMPDMDGFKLLE +GLE+DLPV+M+S+ DT +V++G+ HGA D+L+KPVR+EEL+N WQ
Sbjct: 91 YMPDMDGFKLLEHIGLELDLPVIMMSSNGDTDVVLRGVTHGAVDFLIKPVRVEELRNVWQ 150
Query: 138 HVIRRK--KVDPKDQNRSPHEFEKSYR----KRKDQDGEDEDEDGDDDGHENENSTTQKK 191
HV+RR+ V S + E+ KRK+ + ++E KK
Sbjct: 151 HVVRRRSLHVGRASDEHSGLDLEQHQHHHGVKRKEVEALQV---------QHETQGANKK 201
Query: 192 PRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
PRVVW+ E+H +F+ AVN LG+DKAVPK+ILDLMNVEGLTRENVASHLQK+RL LKR
Sbjct: 202 PRVVWSVEMHQQFVDAVNQLGVDKAVPKRILDLMNVEGLTRENVASHLQKYRLYLKR 258
>gi|297814420|ref|XP_002875093.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
gi|297320931|gb|EFH51352.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
Length = 386
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/289 (48%), Positives = 183/289 (63%), Gaps = 31/289 (10%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP G+R+L VDDD +CL ILEK L Y+VT+ ++A AL +LRE +++FDLV+SDV
Sbjct: 5 DQFPSGLRILLVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDV 64
Query: 78 YMPDMDGFKLLELVGL-EMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTW 136
+MP M+G+KLL+ VGL E+DLPV+M+S T VM GINHGACDYL+KP+R EELKN W
Sbjct: 65 HMPGMNGYKLLQQVGLLELDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIW 124
Query: 137 QHVIRRKKVDPKD--------QNRSPHEFEKSYRKRKDQDG---------------EDED 173
QHV+RRK V K+ N++ E + + +G + ED
Sbjct: 125 QHVVRRKCVKKKELRNSQALEDNKNSGSLETVFSVSECSEGSLMKRRKKKKKKRSVDRED 184
Query: 174 EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
+ D D + NS KK RVVW+ ELH +F+ AVN L +DKAVPK+IL+LMNV GL+RE
Sbjct: 185 NENDLDLLDPGNS---KKSRVVWSIELHQQFVNAVNKLEIDKAVPKRILELMNVPGLSRE 241
Query: 234 NVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSH 282
NVASHLQKFR+ LKRL + + S+ Y I AL G H
Sbjct: 242 NVASHLQKFRMYLKRLSGEASQNNDTESI----KRYENIQALVSSGQLH 286
>gi|15220515|ref|NP_176938.1| two-component response regulator ARR11 [Arabidopsis thaliana]
gi|50400646|sp|Q9FXD6.1|ARR11_ARATH RecName: Full=Two-component response regulator ARR11; AltName:
Full=Receiver-like protein 3
gi|11072012|gb|AAG28891.1|AC008113_7 F12A21.15 [Arabidopsis thaliana]
gi|31711702|gb|AAP68207.1| At1g67710 [Arabidopsis thaliana]
gi|110736401|dbj|BAF00169.1| response regulator 11 [Arabidopsis thaliana]
gi|332196565|gb|AEE34686.1| two-component response regulator ARR11 [Arabidopsis thaliana]
Length = 521
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/296 (50%), Positives = 188/296 (63%), Gaps = 29/296 (9%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
P+G+RVL VDDD T LKILEK L++C YEVT A AL++LRE ++ +D+VISDV MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 81 DMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
DMDGFKLLE VGLE+DLPV+M+S +T VMKG+ HGACDYLLKP+RM+ELK WQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQ-----DGED-------EDEDGDDDGHENEN--- 185
R+K + +D +E + R D+ GED +D D + ++E+
Sbjct: 128 RKKLQEVRDIEGCGYEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLLQDESDPS 187
Query: 186 STTQKKPRVVWTTELHTKFIGAVNLLGLD-KAVPKKILDLMNVEGLTRENVASHLQKFRL 244
S++ KK RVVW+ ELH KF+ AVN +G D KA PKKILDLMNV LTRENVASHLQK+RL
Sbjct: 188 SSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRL 247
Query: 245 SLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSYV 300
L RL V + DSS + G+ SPGR SSYV
Sbjct: 248 YLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGY------QSPGR-------SSYV 290
>gi|7576358|dbj|BAA94549.1| response regulator 11 [Arabidopsis thaliana]
Length = 457
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/296 (50%), Positives = 188/296 (63%), Gaps = 29/296 (9%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
P+G+RVL VDDD T LKILEK L++C YEVT A AL++LRE ++ +D+VISDV MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 81 DMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
DMDGFKLLE VGLE+DLPV+M+S +T VMKG+ HGACDYLLKP+RM+ELK WQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQ-----DGED-------EDEDGDDDGHENEN--- 185
R+K + +D +E + R D+ GED +D D + ++E+
Sbjct: 128 RKKLQEVRDIEGCGYEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLLQDESDPS 187
Query: 186 STTQKKPRVVWTTELHTKFIGAVNLLGLD-KAVPKKILDLMNVEGLTRENVASHLQKFRL 244
S++ KK RVVW+ ELH KF+ AVN +G D KA PKKILDLMNV LTRENVASHLQK+RL
Sbjct: 188 SSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRL 247
Query: 245 SLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSYV 300
L RL V + DSS + G+ SPGR SSYV
Sbjct: 248 YLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGY------QSPGR-------SSYV 290
>gi|297841471|ref|XP_002888617.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
gi|297334458|gb|EFH64876.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
Length = 529
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/245 (55%), Positives = 172/245 (70%), Gaps = 16/245 (6%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
P+G+RVL VDDD T LKILEK L++C YEVT A AL++LRE ++ +D+VISDV MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 81 DMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
DMDGFKLLE VGLE+DLPV+M+S +T VMKG+ HGACDYLLKP+RM+ELK WQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQ-----DGED-------EDEDGDDDGHENEN--- 185
R+K + +D +E + R D+ GED +D D + ++E+
Sbjct: 128 RKKLQEVRDIEGCGYEGGGDWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLLQDESDPS 187
Query: 186 STTQKKPRVVWTTELHTKFIGAVNLLGLD-KAVPKKILDLMNVEGLTRENVASHLQKFRL 244
S++ KK RVVW+ ELH KF+ AVN +G D KA PKKILDLMNV LTRENVASHLQK+RL
Sbjct: 188 SSSSKKARVVWSFELHQKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRL 247
Query: 245 SLKRL 249
L RL
Sbjct: 248 YLSRL 252
>gi|384254096|gb|EIE27570.1| CheY-like protein [Coccomyxa subellipsoidea C-169]
Length = 302
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 128/266 (48%), Positives = 170/266 (63%), Gaps = 39/266 (14%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
M+ E+ S S E FP G++VL VDDD CLK++E LR C Y+VT AL
Sbjct: 36 MSGEDLARSDSWE-----MFPAGLKVLVVDDDPLCLKVVEHMLRRCNYQVTTCPNGKAAL 90
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+ LR+ +FDLV+SDVYMPDMDGFKLLE +GLE+DLPV+M+S+ +T +V++G+ HGA
Sbjct: 91 EKLRDRSVHFDLVLSDVYMPDMDGFKLLEHIGLELDLPVIMMSSNGETNVVLRGVTHGAV 150
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDG 180
D+L+KPVR+EEL+N WQHV+RRK+ Q R + DE+G DDG
Sbjct: 151 DFLIKPVRVEELRNVWQHVVRRKRDQAVSQARDSRDI--------------SDEEGTDDG 196
Query: 181 --------------------HENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKK 220
++++ + KK RVVW+ E+H +F+ AVN LG+DKAVPK+
Sbjct: 197 KPRDKKRKEVILVLWWDMQRRDSDDGVSAKKARVVWSVEMHQQFVQAVNQLGIDKAVPKR 256
Query: 221 ILDLMNVEGLTRENVASHLQKFRLSL 246
ILDLMNV+GLTRENVASHLQ LS+
Sbjct: 257 ILDLMNVDGLTRENVASHLQVPHLSI 282
>gi|359950754|gb|AEV91167.1| MYB-related protein [Triticum aestivum]
Length = 630
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 155/352 (44%), Positives = 210/352 (59%), Gaps = 41/352 (11%)
Query: 62 MLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACD 121
MLRENR FD++ISDV+MPDM+GF+LLELVGLEMDLPV+M+SA S T LVMKGI HGACD
Sbjct: 1 MLRENRGAFDVIISDVHMPDMNGFRLLELVGLEMDLPVIMMSADSRTDLVMKGIKHGACD 60
Query: 122 YLLKPVRMEELKNTWQHVIRRK-----------KVDPKDQNR---SPHEF--------EK 159
YL+KPVRMEELKN WQHV+R+K +D D+NR + +E+ E
Sbjct: 61 YLIKPVRMEELKNIWQHVVRKKFGGNKEHEHSGSLDDTDRNRLTNNDNEYASSANDGAED 120
Query: 160 SYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPK 219
S++ +K + ++ED+ + G + NS KK RVVW+ ELH +F+ AVN LG+DKAVPK
Sbjct: 121 SWKSQKKKRDKEEDDSELESGDPSNNS---KKLRVVWSVELHQQFVNAVNHLGIDKAVPK 177
Query: 220 KILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSS--YLRIGALDG 277
KIL+LMNV GLTRENVASHLQKFRL LKR+ AGM G SS +G LD
Sbjct: 178 KILELMNVPGLTRENVASHLQKFRLYLKRIAQH--HAGMANPYGVPASSAQVASLGGLD- 234
Query: 278 FGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGL------SMHGIASSGMIKPGLSQ 331
++ + G++ AL++ + ++GR +S L S+ A G G
Sbjct: 235 ---FQALAASGQIPPQALAA--LQDELLGRPTNSLVLPGRDQSSLRLAAVKGNKPHGEQI 289
Query: 332 SFNTSFNTIGKNQQAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNH 383
+F + N A P N + ++ N++ S+S + +G+ N+
Sbjct: 290 AFGQPIYKVQNNSYAALPQNNPAAGRMPSFSAWPNNKLGMSDSMSALGNVNN 341
>gi|3549639|emb|CAA06431.1| receiver-like protein 3 [Arabidopsis thaliana]
Length = 444
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 149/296 (50%), Positives = 188/296 (63%), Gaps = 29/296 (9%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
P+G+RVL VDDD T LKILEK L++C YEVT A AL++LRE ++ +D+VISDV MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 81 DMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
DMDGFKLLE VGLE+DLPV+M+S +T VMKG++ GACDYLLKP+RM+ELK WQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVHTGACDYLLKPIRMKELKIIWQHVL 127
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQ-----DGED-------EDEDGDDDGHENEN--- 185
R+K + +D +E + R D+ GED +D D + ++E+
Sbjct: 128 RKKLQEVRDIEGCGYEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLLQDESDPS 187
Query: 186 STTQKKPRVVWTTELHTKFIGAVNLLGLD-KAVPKKILDLMNVEGLTRENVASHLQKFRL 244
S++ KK RVVW+ ELH KF+ AVN +G D KA PKKILDLMNV LTRENVASHLQK+RL
Sbjct: 188 SSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRL 247
Query: 245 SLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSYV 300
L RL V + DSS + G+ SPGR SSYV
Sbjct: 248 YLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGY------QSPGR-------SSYV 290
>gi|358345516|ref|XP_003636823.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|358348885|ref|XP_003638472.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355502758|gb|AES83961.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355504407|gb|AES85610.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|403502189|gb|AFR46617.1| response regulator 1 [Medicago truncatula]
Length = 228
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/302 (48%), Positives = 178/302 (58%), Gaps = 83/302 (27%)
Query: 14 DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLV 73
D D+FPIGMRVLAVDDD T L +LE LR CQY VT T+ AITAL ML+EN + FDLV
Sbjct: 2 DDFSDRFPIGMRVLAVDDDPTSLLLLETLLRSCQYHVTTTSEAITALTMLQENIDMFDLV 61
Query: 74 ISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELK 133
I++V+MPDMDG KLLELVGLEMDLPV+MLSA+ +T+LVMK I+HGA D+LLKPVR+EEL+
Sbjct: 62 IAEVHMPDMDGLKLLELVGLEMDLPVIMLSAHGETELVMKAISHGARDFLLKPVRLEELR 121
Query: 134 NTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPR 193
N WQHVIR K+ +
Sbjct: 122 NIWQHVIR-----------------------------------------------NKESQ 134
Query: 194 VVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKT 253
VW+ ELH KF+ VN LG+DKAVPKKI DLMNVE +TRE+VA+HLQK+RL LKR+
Sbjct: 135 FVWSVELHRKFLETVNQLGVDKAVPKKIFDLMNVENITREDVATHLQKYRLFLKRM---- 190
Query: 254 LEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAG 313
DSS H N+ R S+ P ++G LN+ AG
Sbjct: 191 ------------DSS------------GHFHNNTIR--------SFSPAGIVGNLNTPAG 218
Query: 314 LS 315
L+
Sbjct: 219 LN 220
>gi|21593727|gb|AAM65694.1| putative two-component response regulator protein [Arabidopsis
thaliana]
Length = 382
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 131/255 (51%), Positives = 169/255 (66%), Gaps = 24/255 (9%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP G+R+L VDDD +CL ILEK L Y+VT+ ++A AL +LRE +++FDLV+SDV
Sbjct: 5 DQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDV 64
Query: 78 YMPDMDGFKLLELVGL-EMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTW 136
+MP M+G+ LL+ VGL EMDLPV+M+S T VM GINHGACDYL+KP+R EELKN W
Sbjct: 65 HMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIW 124
Query: 137 QHVIRRKKVDPKDQNRSPHEFE--------KSYRKRKDQDGEDEDEDGDDDGHENENSTT 188
QHV+RRK V K+ RS E ++ + E+ + + + S
Sbjct: 125 QHVVRRKCVMKKEL-RSSQALEDNKNSGSLETVVVSVSECSEESLMKCRNKKKKKKRSVD 183
Query: 189 Q--------------KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTREN 234
+ KK RVVW+ ELH +F+ AVN LG+DKAVPK+IL+LMNV GL+REN
Sbjct: 184 RDDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGLSREN 243
Query: 235 VASHLQKFRLSLKRL 249
VASHLQKFRL LKRL
Sbjct: 244 VASHLQKFRLYLKRL 258
>gi|15226345|ref|NP_178285.1| two-component response regulator ARR14 [Arabidopsis thaliana]
gi|50400550|sp|Q8L9Y3.2|ARR14_ARATH RecName: Full=Two-component response regulator ARR14
gi|4220473|gb|AAD12696.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|20466520|gb|AAM20577.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|22136418|gb|AAM91287.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330250401|gb|AEC05495.1| two-component response regulator ARR14 [Arabidopsis thaliana]
Length = 382
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 131/255 (51%), Positives = 169/255 (66%), Gaps = 24/255 (9%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP G+R+L VDDD +CL ILEK L Y+VT+ ++A AL +LRE +++FDLV+SDV
Sbjct: 5 DQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDV 64
Query: 78 YMPDMDGFKLLELVGL-EMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTW 136
+MP M+G+ LL+ VGL EMDLPV+M+S T VM GINHGACDYL+KP+R EELKN W
Sbjct: 65 HMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIW 124
Query: 137 QHVIRRKKVDPKDQNRSPHEFE--------KSYRKRKDQDGEDEDEDGDDDGHENENSTT 188
QHV+RRK V K+ RS E ++ + E+ + + + S
Sbjct: 125 QHVVRRKCVMKKEL-RSSQALEDNKNSGSLETVVVSVSECSEESLMKCRNKKKKKKRSVD 183
Query: 189 Q--------------KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTREN 234
+ KK RVVW+ ELH +F+ AVN LG+DKAVPK+IL+LMNV GL+REN
Sbjct: 184 RDDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGLSREN 243
Query: 235 VASHLQKFRLSLKRL 249
VASHLQKFRL LKRL
Sbjct: 244 VASHLQKFRLYLKRL 258
>gi|297743941|emb|CBI36911.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 126/248 (50%), Positives = 166/248 (66%), Gaps = 16/248 (6%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
M E GS S V +FP G+RVLAVDDDQTCL+I+ + L C Y+VT A AL
Sbjct: 1 MNVETGEGSMSVTAAVPLQFPEGIRVLAVDDDQTCLQIMGRMLERCMYKVTKCRNAEEAL 60
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+LRE+ + FD+V+SD++MPD+ G KLLE++GLEMD+PVVM+S+ + +MKGI HGAC
Sbjct: 61 SLLREDSSRFDIVLSDLHMPDISGLKLLEIIGLEMDMPVVMMSSDEKRETIMKGIIHGAC 120
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSP--------HEFEKSYRKRKDQDGEDE 172
DY +KPVRM+ ++ WQHVIR+++ K+ + E +S +++KD+ EDE
Sbjct: 121 DYWVKPVRMDAIQLVWQHVIRKRRNGLKEMEHAMEDDVEGGNEEGSRSMKRKKDR--EDE 178
Query: 173 DEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTR 232
E N TT KKPR+VWT LH +F+ AVN LG KAVPKKIL+ MN+ GLTR
Sbjct: 179 GES------RNAMPTTVKKPRMVWTPALHQQFVAAVNQLGYSKAVPKKILEQMNLPGLTR 232
Query: 233 ENVASHLQ 240
ENVASHLQ
Sbjct: 233 ENVASHLQ 240
>gi|242093586|ref|XP_002437283.1| hypothetical protein SORBIDRAFT_10g024180 [Sorghum bicolor]
gi|241915506|gb|EER88650.1| hypothetical protein SORBIDRAFT_10g024180 [Sorghum bicolor]
Length = 685
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/268 (47%), Positives = 170/268 (63%), Gaps = 42/268 (15%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENR---NNFDLVI 74
D FP G+RVLAV+ D+ C K+LE+ L+ C Y T+ A TAL MLRE + N FDLVI
Sbjct: 4 DTFPAGLRVLAVEHDRVCRKVLERQLQYCNYNATMVTNAQTALDMLRERKEYGNQFDLVI 63
Query: 75 SDVYMP--DMDGFKLLELVGLEMDLPVV------------------MLSAYSDTKLVMKG 114
S+V MP +MDGFKLLEL+GLEMDLPV+ +LSA S+T+ +MKG
Sbjct: 64 SNVVMPKPNMDGFKLLELIGLEMDLPVICNKALAQTYFLHFYGTLYVLSANSETQTIMKG 123
Query: 115 INHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDE 174
I HGAC+Y++KPVR+E+L+ W HV++ K D + RK DG+
Sbjct: 124 IKHGACEYMVKPVRLEQLRGIWTHVVKNSKTD------------HAIRKLPCGDGDKVKN 171
Query: 175 DGDDD-------GHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNV 227
+ + +N++TQKK RV W ELH KF+ A+N +G+D+AVPKKIL++MNV
Sbjct: 172 YSRKNKMVVDVADDDKDNTSTQKKQRVQWCGELHQKFVQAINQIGMDRAVPKKILEVMNV 231
Query: 228 EGLTRENVASHLQKFRLSLKRLGNKTLE 255
EGLT+ENVASHLQK+R+ L++L TL
Sbjct: 232 EGLTKENVASHLQKYRIYLRKLSEGTLR 259
>gi|147835104|emb|CAN70187.1| hypothetical protein VITISV_039080 [Vitis vinifera]
Length = 650
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/234 (54%), Positives = 166/234 (70%), Gaps = 7/234 (2%)
Query: 19 KFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
+FP G+RVLAVDD+ CLKIL L +C+Y+VT T +A AL+MLRENR NFD+VI+DV
Sbjct: 151 QFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRXNFDIVITDVK 210
Query: 79 MPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
MPDMDGF LL+++GLEMD+PV+M S D V+KGI HGA DYLLKPVR+ E+KN WQH
Sbjct: 211 MPDMDGFTLLKIIGLEMDIPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNIWQH 270
Query: 139 VIRRKKVD---PKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVV 195
V+R+ D P + E EKS K + E+ED + H E+ + +KK R+
Sbjct: 271 VVRKNLFDSGKPGVKEEKAMEMEKSKEKEGGGEEEEEDHPKE---HSFEDGSVRKKQRLN 327
Query: 196 WTTELHTKFIGAVNLL-GLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
WT+ELH KF+ A++ L DKAVPKKIL++MN GL+RENVASHLQK+R L++
Sbjct: 328 WTSELHIKFLNAIHQLETADKAVPKKILEIMNEPGLSRENVASHLQKYRKMLRK 381
>gi|225446094|ref|XP_002270118.1| PREDICTED: uncharacterized protein LOC100266808 [Vitis vinifera]
Length = 643
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/232 (54%), Positives = 164/232 (70%), Gaps = 2/232 (0%)
Query: 19 KFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
+FP G+RVLAVDD+ CLKIL L +C+Y+VT T +A AL+MLRENR NFD+VI+DV
Sbjct: 143 QFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRENFDIVITDVK 202
Query: 79 MPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
MPDMDGF LL+++GLEMD+PV+M S D V+KGI HGA DYLLKPVR+ E+KN WQH
Sbjct: 203 MPDMDGFTLLKIIGLEMDIPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNIWQH 262
Query: 139 VIRRKKVDP-KDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWT 197
V+R+ D K + E K K E+E+E+ H E+ + +KK R+ WT
Sbjct: 263 VVRKNLFDSGKPGVKEEKAMEMEKSKEKGGGEEEEEEEDHPKEHSFEDGSVRKKQRLNWT 322
Query: 198 TELHTKFIGAVNLL-GLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
+ELH KF+ A++ L DKAVPKKIL++MN GL+RENVASHLQK+R L++
Sbjct: 323 SELHIKFLNAIHQLETADKAVPKKILEIMNEPGLSRENVASHLQKYRKMLRK 374
>gi|356528234|ref|XP_003532710.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR11-like [Glycine max]
Length = 581
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 130/275 (47%), Positives = 164/275 (59%), Gaps = 19/275 (6%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D FP G+RVL VDD + + FL VT A ALK LRE + +D+VISDV
Sbjct: 13 DAFPAGLRVLVVDDXANIISLSNSFLLYAS--VTTCCLATEALKKLRERKEAYDIVISDV 70
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
MPDMDGFKLLE VGLEMDLPV+M+S +T VMKG+ HGACDYLLKP+RM+EL+N WQ
Sbjct: 71 NMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 130
Query: 138 HVIRRKKVDPKD-QNRSPHEFEKSYRKRKDQDGEDE----------------DEDGDDDG 180
HV R++ + +D ++ +FE + R D D+ D D D
Sbjct: 131 HVFRKRMHEARDFESHEGFDFEGIHLMRNGSDHSDDGNLFAVEETTSIKKRKDADNKHDD 190
Query: 181 HENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
E + KK RVVW+ +LH KF+ AVN +G DK PKKILDLMNV LTRENVASHLQ
Sbjct: 191 KEFGDHFPTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 250
Query: 241 KFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGAL 275
K+RL L RL + + + + DS +G+
Sbjct: 251 KYRLYLSRLQKENDQKSSSSGIKHSDSPSKDLGSF 285
>gi|255564288|ref|XP_002523141.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223537703|gb|EEF39326.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 473
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 127/270 (47%), Positives = 170/270 (62%), Gaps = 39/270 (14%)
Query: 8 GSSSDE---DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR 64
GSSS E D V ++FP G+RVL VDDD+TCL ILEK LR C Y+VT +A AL MLR
Sbjct: 16 GSSSLEKTSDCVSNEFPAGLRVLVVDDDRTCLLILEKMLRNCLYKVTKCRKAKDALSMLR 75
Query: 65 ENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLL 124
E++N FD+V+ D++MPDMDGF+LLE+ EM LPVVM+S+ D +++ KG+ HGACDYL+
Sbjct: 76 EDKNKFDIVVIDLHMPDMDGFELLEIAEFEMGLPVVMMSSDDDHEVIKKGVLHGACDYLI 135
Query: 125 KPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFE-----------------------KSY 161
KPVRME LK WQHVIR+KK KD+ E ++
Sbjct: 136 KPVRMEALKMIWQHVIRKKKNTAKDELEQLIGLEDDILLLTKPDSDDDMIHGNLNNTRNS 195
Query: 162 RKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKI 221
++R++ + +DE D G K R++WT ELH KF+ A N LG + AVP KI
Sbjct: 196 KRRRNNEYDDEPSDPAATG----------KKRMIWTEELHEKFVRAFNHLGHENAVPLKI 245
Query: 222 LDL---MNVEGLTRENVASHLQKFRLSLKR 248
L+ MNV +TRE++ASHLQK+R+ L++
Sbjct: 246 LECLQRMNVHSITREHIASHLQKYRMYLRK 275
>gi|302852985|ref|XP_002958010.1| ARR-B family transcription factor [Volvox carteri f. nagariensis]
gi|300256682|gb|EFJ40943.1| ARR-B family transcription factor [Volvox carteri f. nagariensis]
Length = 254
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 118/238 (49%), Positives = 155/238 (65%), Gaps = 24/238 (10%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+R+L VDDD CLK++E+ LR+C Y+VT A AL +LR+ +DLV+SD ++
Sbjct: 24 FPAGLRLLVVDDDPLCLKVVEQMLRKCSYDVTTCTNATMALNLLRDKSTEYDLVLSDSFL 83
Query: 80 ---PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTW 136
DMDGFKLLE+VGLEMDLPV+M+S+ DT V++G+ HGACDYL+KPVR+EEL+N W
Sbjct: 84 VSSSDMDGFKLLEVVGLEMDLPVIMMSSNGDTSNVLRGVTHGACDYLIKPVRLEELRNLW 143
Query: 137 QHVIRRKKV--------------DPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHE 182
QHV+RR++ N + DE G D+G
Sbjct: 144 QHVVRRRRQLRMMGAGCSGGANGLGSTGNLGAVATGSAGLGLGLGTAADELGLGLDNG-- 201
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
+ KK RVVW+ E+H +F+ AVN LG+DKAVPKKIL++MNV+GLTRENVASHLQ
Sbjct: 202 -----SSKKARVVWSVEMHQQFVNAVNQLGIDKAVPKKILEIMNVDGLTRENVASHLQ 254
>gi|224102357|ref|XP_002312648.1| type-b response regulator [Populus trichocarpa]
gi|222852468|gb|EEE90015.1| type-b response regulator [Populus trichocarpa]
Length = 642
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 147/366 (40%), Positives = 185/366 (50%), Gaps = 94/366 (25%)
Query: 5 EKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR 64
E G SS + D FP G+RVL VDDD T LKILEK L++C YEVT A AL +LR
Sbjct: 2 ENNGFSSPRN---DSFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLLR 58
Query: 65 ENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVV------------------------ 100
E + +D+VISDVYMPDMDGFKLLE VGLEMDLPV+
Sbjct: 59 ERKGGYDIVISDVYMPDMDGFKLLEQVGLEMDLPVISRFFSLTLEFYFNANIFYLRIHIP 118
Query: 101 ------------------------MLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTW 136
++S +T VMKG+ HGACDYLLKP+RM+EL+N W
Sbjct: 119 MSCLHYIYIGILIQLLTSCACQLTVMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 178
Query: 137 QHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDG-------------------D 177
QHV R+K + +D E+ + ++G D+ EDG
Sbjct: 179 QHVFRKKIHEVRDI----ETLERVESFQMTRNGSDQYEDGHVLCGEDLTSIKKRKHIESK 234
Query: 178 DDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLD------------------KAVPK 219
D + +S + KK RVVW+ +LH KF+ AVN +G D + PK
Sbjct: 235 HDEKDTGDSISTKKARVVWSVDLHQKFVKAVNQIGFDTTSLPSFDGAMTGSVCLAEVGPK 294
Query: 220 KILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFG 279
KILD+MNV LTRENVASHLQK+RL L RL + + DS LR A FG
Sbjct: 295 KILDMMNVPWLTRENVASHLQKYRLYLSRLQKENDFKNPAGGIKQSDSP-LRDSA-GSFG 352
Query: 280 GSHSVN 285
+S+N
Sbjct: 353 SQNSIN 358
>gi|356554487|ref|XP_003545577.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Glycine max]
Length = 379
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 127/256 (49%), Positives = 170/256 (66%), Gaps = 33/256 (12%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP+G+ V+A+DDDQ CL +LE + +C Y VT TN+AI L MLR+N N FDL+ISDV
Sbjct: 74 DRFPVGLCVVAIDDDQMCLTVLENLIHKCHYNVTTTNQAIKVLXMLRKNINKFDLLISDV 133
Query: 78 YMPDMDGFKLLELVGLEMDLPVV--MLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
+PDMDGFKLLELVGL+MDLP + + YS + + GAC+YL KP+R+EEL+N
Sbjct: 134 NIPDMDGFKLLELVGLQMDLPFITKIKHLYSVFTFIQLDVIQGACEYLTKPIRIEELQNI 193
Query: 136 WQHVIRRKKVDPKDQNRS-PHEFEKSY------------------------RKRKDQDGE 170
W+HV+R ++D KD+N++ +E + SY RK + +D E
Sbjct: 194 WKHVLRM-RIDSKDKNKTFANEEKASYMAGECSQAMAPKNNTDQNIKLGQKRKEQSEDEE 252
Query: 171 DEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGL 230
+E+ +++ H N+N KPR+VW ELH KF+ AV+ LG+DKA PK+ILDLMNVEGL
Sbjct: 253 EEEYHKENEEHLNQN-----KPRLVWDVELHRKFLVAVDDLGIDKAFPKRILDLMNVEGL 307
Query: 231 TRENVASHLQKFRLSL 246
TRENVASHLQ LS
Sbjct: 308 TRENVASHLQAGSLSF 323
>gi|358345518|ref|XP_003636824.1| Response regulator [Medicago truncatula]
gi|358348887|ref|XP_003638473.1| Response regulator [Medicago truncatula]
gi|355502759|gb|AES83962.1| Response regulator [Medicago truncatula]
gi|355504408|gb|AES85611.1| Response regulator [Medicago truncatula]
Length = 240
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 129/228 (56%), Positives = 156/228 (68%), Gaps = 38/228 (16%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FPIGMRVLAVD D T L LE LR CQY VT T++A TAL MLREN++ FDLVI+DV
Sbjct: 6 DRFPIGMRVLAVDGDSTHLSDLETRLRSCQYHVTTTSQAKTALTMLRENKDKFDLVIADV 65
Query: 78 YMPDMDGFKLLELVGLEMDLPVV-MLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTW 136
++PDMDG KLLELV LE DLPVV MLS SD +LVMK + HGA D+L+KPVR++ELK W
Sbjct: 66 HLPDMDGLKLLELVELETDLPVVVMLSESSDNELVMKAVFHGASDFLVKPVRLQELKTIW 125
Query: 137 QHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVW 196
QHVIR+KK +NE+ + QKK + VW
Sbjct: 126 QHVIRKKK-------------------------------------DNEDLSAQKKSQSVW 148
Query: 197 TTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRL 244
+ ELH KF+ AVN LG+DKAVP+KIL LMNVE +TRE+VASHL+K+RL
Sbjct: 149 SVELHHKFVAAVNQLGIDKAVPEKILGLMNVENITREDVASHLRKYRL 196
>gi|224143763|ref|XP_002325066.1| type-b response regulator [Populus trichocarpa]
gi|222866500|gb|EEF03631.1| type-b response regulator [Populus trichocarpa]
Length = 517
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 186/299 (62%), Gaps = 14/299 (4%)
Query: 10 SSDEDGVIDKF-PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRN 68
S ++G D F P +RVLA+D + CLK L L++CQY VT T A ALKMLREN+N
Sbjct: 12 SMHDEGRGDMFNPADLRVLAIDANVVCLKYLVAILQKCQYRVTSTTLAAEALKMLRENKN 71
Query: 69 NFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVR 128
++ +VI+DV DMDGFKLLE++GLEMDLPV+++SA +MKGI HGA DYLLKPVR
Sbjct: 72 DYHVVITDVKRLDMDGFKLLEIIGLEMDLPVILVSAEDSQSSIMKGIRHGARDYLLKPVR 131
Query: 129 MEELKNTWQHVIRRK--KVDPKDQNRSPHEFEKSYRKRKDQDGEDE---DEDGDDDGHEN 183
++E++N WQHV+R++ K + + E+ + E E ++ + G+ N
Sbjct: 132 IQEMQNIWQHVVRKRLSDSSDKSSSFTKEIIEQESVPSTEPMAEAEVTGVKEKEIIGNPN 191
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLGL--DKAVPKKILDLMNVEGLTRENVASHLQK 241
++ + KKPRV W++ELH KF+ V L ++ PK+I ++MNVEGL+REN+ASHLQK
Sbjct: 192 GDACSGKKPRVTWSSELHVKFVDCVEKLEARGERVQPKRIREMMNVEGLSRENIASHLQK 251
Query: 242 FRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGAL-DGFGGSH--SVNSPGRLSSSALSS 297
+R LK+ +K + + G+ + Y RI A +G ++ S P L+SS S
Sbjct: 252 YRNLLKKHKDKMNQQD---NAGTDLNRYGRISATKNGLWNTYGDSTPKPQSLASSCTDS 307
>gi|297733625|emb|CBI14872.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 158/254 (62%), Gaps = 23/254 (9%)
Query: 42 FLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVM 101
L++C YE+T A AL ML+E +N+FD++ISDV MPDMDGF+LLE + +EMDLPV++
Sbjct: 1 MLKKCSYEMTTCCVARDALSMLQERKNSFDIIISDVNMPDMDGFQLLEHLEVEMDLPVIL 60
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQ----NRSPHEF 157
+S + VMKG+ GACDYLLKPVRMEELKN WQHV+R+K + K+ +RS +E
Sbjct: 61 ISVDGEMNRVMKGVQSGACDYLLKPVRMEELKNIWQHVLRKKIHEGKNSQVMISRSSNEL 120
Query: 158 E----------KSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGA 207
+ + RKRKD + D+ ++ +T KK RVVW+ +LH KF+
Sbjct: 121 DDGQQLNGGEVSATRKRKDMENRRHDD------QKSVEPSTSKKARVVWSIDLHQKFVDV 174
Query: 208 VNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDS 267
V +G DKA PKKILDLMNV LTRENVASHLQK+R L +L E + +S G
Sbjct: 175 VTQIGYDKARPKKILDLMNVPWLTRENVASHLQKYRFYLSKLRK---ENKVKSSQGMMQQ 231
Query: 268 SYLRIGALDGFGGS 281
+ R GF S
Sbjct: 232 DFTRPAGSFGFQTS 245
>gi|147805870|emb|CAN64871.1| hypothetical protein VITISV_039966 [Vitis vinifera]
Length = 570
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/308 (43%), Positives = 173/308 (56%), Gaps = 53/308 (17%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRE--------CQY-------EVTVTNRAITALKM 62
D FP G+RVLAVDDD LKIL R+ C+ VT A AL M
Sbjct: 8 DAFPAGLRVLAVDDDPAWLKILLIIFRKKLNFAGVICRMFPKLYLARVTTCCVARDALSM 67
Query: 63 LRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDY 122
L+E +N+FD++ISDV MPDMDGF+LLE + +EMDLPV+++S + VMKGI GACDY
Sbjct: 68 LQERKNSFDIIISDVNMPDMDGFQLLEHLEVEMDLPVILISVDGEMNRVMKGIQSGACDY 127
Query: 123 LLKPVRMEELKNTWQHVIRRKKVDPKDQ----NRSPHEFE----------KSYRKRKDQD 168
LLKPVRMEELKN WQHV+R+K + K+ +RS +E + + RKRKD +
Sbjct: 128 LLKPVRMEELKNIWQHVLRKKIHEGKNSQVMISRSSNELDDGQQLNGGEVSATRKRKDME 187
Query: 169 GEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDK------------- 215
D+ ++ +T KK RVVW+ +LH KF+ V +G D+
Sbjct: 188 NRRHDD------QKSVEPSTSKKARVVWSIDLHQKFVDVVTQIGYDRFCIDGVLMVIHLT 241
Query: 216 -AVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGA 274
A PKKILDLMNV LTRENVASHLQ +R L +L E + +S G + R
Sbjct: 242 EARPKKILDLMNVPWLTRENVASHLQ-YRFYLSKLRK---ENEVKSSQGMMQQDFTRPAG 297
Query: 275 LDGFGGSH 282
GF S+
Sbjct: 298 SFGFQTSN 305
>gi|255547922|ref|XP_002515018.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546069|gb|EEF47572.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 419
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 130/294 (44%), Positives = 174/294 (59%), Gaps = 26/294 (8%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL VD+D T +ILEK L++C Y+V T + AL MLR ++ +D+VI DV
Sbjct: 14 FPAGLRVLVVDNDPTWSRILEKMLKKCSYQVA-TCGSRDALNMLRGRKDEYDIVICDVTT 72
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
DMDGF+LLE +GL+MD PV+ SA + KG+ HGACDYLLKP+RM+EL+N WQHV
Sbjct: 73 SDMDGFRLLEHIGLKMDCPVINASALXXASALQKGVRHGACDYLLKPIRMKELRNIWQHV 132
Query: 140 IRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDD--------DGHENENSTTQKK 191
R++ HE + DQ + G+D + + ++ K
Sbjct: 133 FRKR----------IHEVRECEILGSDQACDGPLLRGEDLASVKKRKYADQKADISSAKM 182
Query: 192 PRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL-G 250
R+VWT +LH KF+ AV+ +G DK PKKILD MNV LTRENVA HLQK+RL L RL
Sbjct: 183 ARLVWTVDLHQKFVKAVHQIGFDKIGPKKILDRMNVPWLTRENVAGHLQKYRLYLSRLQT 242
Query: 251 NKTLE-AGMVASVGSKDSSYLRIGALD-GFGGSHSVN---SPGRLSSSALSSSY 299
K L+ AG+ +SV K LRI + S+ +N SP R S ++S+ Y
Sbjct: 243 EKDLKFAGLYSSVLKKQIG-LRIACVYLNKIASNFINFSVSPSRDSPRSISTGY 295
>gi|2244969|emb|CAB10390.1| hypothetical protein [Arabidopsis thaliana]
gi|3549643|emb|CAA06433.1| receiver-like protein 5 [Arabidopsis thaliana]
gi|7268360|emb|CAB78653.1| hypothetical protein [Arabidopsis thaliana]
Length = 644
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 155/413 (37%), Positives = 211/413 (51%), Gaps = 82/413 (19%)
Query: 7 GGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLREN 66
GGS+SD FP +RVL VDDD TCL ILE+ L C Y RA
Sbjct: 17 GGSNSD------PFPANLRVLVVDDDPTCLMILERMLMTCLYR---EQRAHCLC--FGRT 65
Query: 67 RNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVV----------MLSAYSDTKLVMKGIN 116
+N FD+VISDV+MPDMDGFKLLE VGLEMDLPV+ ++SA +V+KG+
Sbjct: 66 KNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVINLNVLKPLVIVMSADDSKSVVLKGVT 125
Query: 117 HGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPH-----EFEKSYRKRKDQDGED 171
HGA DYL+KPVR+E LKN WQHV+R+K+ + N S H E R R+ Q ED
Sbjct: 126 HGAVDYLIKPVRIEALKNIWQHVVRKKR---NEWNVSEHSGGSIEDTGGDRDRQQQHRED 182
Query: 172 ED-------------------EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLG 212
D E+ DD G + E+S++ KKPRVVW+ ELH +F+ AVN LG
Sbjct: 183 ADNNSSSVNEGNGRSSRKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLG 242
Query: 213 LDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMV--ASVGSKDSSYL 270
+D + K LM++ ++ N+ QK+R+ L+RLG + G + + + +D S+
Sbjct: 243 VDSEL--KTCLLMHL-CVSIGNIVE-FQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQSFG 298
Query: 271 RIGALDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLS 330
+ +L+GF L S A++ P S+ A L G+ + KPG+S
Sbjct: 299 PLSSLNGFD----------LQSLAVTGQLPPQSL-------AQLQAAGLGRPTLAKPGMS 341
Query: 331 QSFNTSFNTI--GKNQQAMF-----PANRNSNLVQGVQTS----LEPNQMPQS 372
S +I +N + F N NL+ GV T L P Q QS
Sbjct: 342 VSPLVDQRSIFNFENPKIRFGDGHGQTMNNGNLLHGVPTGSHMRLRPGQNVQS 394
>gi|90658417|gb|ABD97105.1| SRR392 [Striga asiatica]
Length = 453
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 109/213 (51%), Positives = 144/213 (67%), Gaps = 16/213 (7%)
Query: 79 MPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
MPDMDGFKLLE VGLEMDLPV+M+SA +VMKG+ HGACDYL+KPVRME LKN WQH
Sbjct: 1 MPDMDGFKLLEHVGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRMEALKNIWQH 60
Query: 139 VIR----RKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDD-----------DGHEN 183
V+R K ++Q+ S + E+ K++D D +G++ +G +
Sbjct: 61 VVRKKKYEWKEKEQEQSGSVEDGERQ-PKQEDVDYSSSANEGNNWKSSKRRKEDEEGEDK 119
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFR 243
E+++T KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL+LM+V GL+RENVASHLQK+R
Sbjct: 120 EDTSTLKKPRVVWSVELHQQFVTAVNQLGIDKAVPKKILELMSVPGLSRENVASHLQKYR 179
Query: 244 LSLKRLGNKTLEAGMVASVGSKDSSYLRIGALD 276
L LKRL + + +G D S+ + L+
Sbjct: 180 LYLKRLSGQHQNGLGNSYMGPTDPSFGPLNPLN 212
>gi|147775384|emb|CAN78184.1| hypothetical protein VITISV_031283 [Vitis vinifera]
Length = 609
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 145/246 (58%), Gaps = 18/246 (7%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPD 81
+G+ ++ VDDD CL I+ L+ +YEV N A AL LR N F L+++DV+MP+
Sbjct: 19 VGLHIMVVDDDVICLSIVAGILKTWKYEVVTVNSAQDALTTLRTRSNFFHLIVTDVHMPE 78
Query: 82 MDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIR 141
MDGF+ LV E LPVVM+SA +++G+ GA Y++KPV ++LKN WQ+ +
Sbjct: 79 MDGFEFQRLVHEEFHLPVVMMSADDKESSMLRGLEAGAAFYIVKPVNYDDLKNLWQYAVG 138
Query: 142 RKK------VDPKDQNRSPHEFEKS------------YRKRKDQDGEDEDEDGDDDGHEN 183
KK + ++ + EK+ ++D + + + +G E
Sbjct: 139 XKKGKSHIVMQEIERTQGASXLEKTSNNEVESLMNEEKHNKRDSKRKTLKKTNEGNGKEK 198
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFR 243
+ KK +V+WT+ LH +F+ A +GL++AVPK+IL++MNV GLTRENVASHLQK+R
Sbjct: 199 SETVAPKKAKVIWTSALHNRFLEAARKIGLERAVPKRILEIMNVPGLTRENVASHLQKYR 258
Query: 244 LSLKRL 249
+ LKR+
Sbjct: 259 IFLKRV 264
>gi|297735376|emb|CBI17816.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 133/194 (68%), Gaps = 1/194 (0%)
Query: 19 KFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
+FP G+RVLAVDD+ CLKIL L +C+Y+VT T +A AL+MLRENR NFD+VI+DV
Sbjct: 14 QFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRENFDIVITDVK 73
Query: 79 MPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
MPDMDGF LL+++GLEMD+PV+M S D V+KGI HGA DYLLKPVR+ E+KN WQH
Sbjct: 74 MPDMDGFTLLKIIGLEMDIPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNIWQH 133
Query: 139 VIRRKKVDP-KDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWT 197
V+R+ D K + E K K E+E+E+ H E+ + +KK R+ WT
Sbjct: 134 VVRKNLFDSGKPGVKEEKAMEMEKSKEKGGGEEEEEEEDHPKEHSFEDGSVRKKQRLNWT 193
Query: 198 TELHTKFIGAVNLL 211
+ELH KF+ A++ L
Sbjct: 194 SELHIKFLNAIHQL 207
>gi|308812550|ref|XP_003083582.1| OJ1695_H09.29 gene product (ISS) [Ostreococcus tauri]
gi|116055463|emb|CAL58131.1| OJ1695_H09.29 gene product (ISS) [Ostreococcus tauri]
Length = 297
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 136/211 (64%), Gaps = 28/211 (13%)
Query: 79 MPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
MPD+DGFKLLE++ E++LPV+M+SA SD+ +V++GI HGA DYLLKPVR+EEL+N WQH
Sbjct: 1 MPDVDGFKLLEIIQFELNLPVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELRNIWQH 60
Query: 139 VIRR-------------------KKVDPKDQNRSPHEFEK------SYRKRKDQDGEDED 173
V+RR K++ + E E+ S + RK G+
Sbjct: 61 VVRRDYSARNSGSEDGVNPSSPSKRLKTSGSDSKSEEVERAANEAGSSKARKKPAGKKGA 120
Query: 174 EDGDDDGHENENST--TQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLT 231
+ + E + + KKPRVVW+ ELHT+F+ AVN LG+DKAVPK+ILDLM ++GLT
Sbjct: 121 KGSKEKEAERKGDAIDSSKKPRVVWSAELHTQFVTAVNQLGIDKAVPKRILDLMGIQGLT 180
Query: 232 RENVASHLQKFRLSLKRL-GNKTLEAGMVAS 261
RENVASHLQK+RL LKRL GN + G AS
Sbjct: 181 RENVASHLQKYRLYLKRLQGNDLMRNGSNAS 211
>gi|303287506|ref|XP_003063042.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
gi|226455678|gb|EEH52981.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
Length = 544
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/149 (57%), Positives = 111/149 (74%), Gaps = 9/149 (6%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
MTAE+K + FP G+RVL VDDD CL+I+EK L+ CQYEVT +R AL
Sbjct: 1 MTAEKK---------ELKVFPAGLRVLVVDDDPLCLRIVEKMLKRCQYEVTTFSRGAEAL 51
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
+ LR R++FD+V+SDV+MPDMDGFKLLE + LE+D+PV+M+SA T +V++GI HGA
Sbjct: 52 ETLRARRDDFDIVLSDVHMPDMDGFKLLEHIALELDVPVMMMSANCATDVVLRGIIHGAV 111
Query: 121 DYLLKPVRMEELKNTWQHVIRRKKVDPKD 149
DYLLKPVR+EEL+N WQHV+RR++ KD
Sbjct: 112 DYLLKPVRLEELRNIWQHVVRRQREPSKD 140
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 80/119 (67%), Gaps = 15/119 (12%)
Query: 182 ENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQK 241
+N++++ KKPRVVW+ ELH +F+ AVN LG+DKAVPK+ILDLM V+GLTRENVASHLQK
Sbjct: 233 DNDDTSGLKKPRVVWSPELHQQFVTAVNQLGIDKAVPKRILDLMGVQGLTRENVASHLQK 292
Query: 242 FRLSLKRL----GNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALS 296
+RL LKRL N T+ +G + ++ A+DG GG V P S A++
Sbjct: 293 YRLYLKRLQGVNNNGTVPSGA--------AGFMTGLAIDGVGG---VMGPPTTGSPAMN 340
>gi|449446191|ref|XP_004140855.1| PREDICTED: uncharacterized protein LOC101217116 [Cucumis sativus]
Length = 634
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 142/245 (57%), Gaps = 11/245 (4%)
Query: 19 KFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
K + + +L VDDD T L I+ LR C+Y+V + AL LR + FDLV++D++
Sbjct: 4 KLLVDIHILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTLRARKGYFDLVVTDLH 63
Query: 79 MPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
MP M+G +L + V E LPV+M+SA +++K + G Y++KP+ ++++K+ WQ+
Sbjct: 64 MPQMNGLQLQKKVMQEFKLPVIMMSADEKPSVILKSLEEGVAFYMVKPISLDDVKHVWQY 123
Query: 139 VIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDED-----------GDDDGHENENST 187
I K V P + + + S K +++ ++ +N +
Sbjct: 124 AITPKNVIPNQTTTTVIQRQLSIDKSSSSSTPCSEKEIIKSKSRSSKFKNNKAKQNSINI 183
Query: 188 TQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLK 247
+K +V+WT LH +F+ A+ L+GL KAVPKKIL+ MNV GLTRENVASHLQK+R+ LK
Sbjct: 184 PIRKSKVIWTNSLHNRFLQAIKLIGLHKAVPKKILEFMNVPGLTRENVASHLQKYRIFLK 243
Query: 248 RLGNK 252
R+ K
Sbjct: 244 RVAEK 248
>gi|297741112|emb|CBI31843.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 145/245 (59%), Gaps = 22/245 (8%)
Query: 35 CLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGFKLLELVGLE 94
CL I+ LR +Y+V + AL LR + F LV++DV+MP++DGF+ + V E
Sbjct: 33 CLSIVAGILRTRRYQVVTVKNPLDALATLRSGSDFFHLVVTDVHMPELDGFEFQKKVQEE 92
Query: 95 MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK---VDPKDQN 151
LPVVM+SA ++KG+ GA Y++KPV ++LKN WQ+ + +K VD +D
Sbjct: 93 FQLPVVMMSADDKESSMLKGLEAGAAFYIVKPVNYDDLKNIWQYAVGPRKDNSVDMQDVG 152
Query: 152 RSPHE---FEKS----------------YRKRKDQDGEDEDEDGDDDGHENENSTTQKKP 192
+P E EK+ + ++D + +D G EN ++ + K+
Sbjct: 153 PAPEEESPVEKTPDDPVDIESVSSVNEVNQSKRDPKKKASKRVIEDSGKENSDAVSPKRT 212
Query: 193 RVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNK 252
+VVWT+ LHT+F+ AV +GL++AVPK+IL+LMN+ GLTRENVASHLQK+R+ L+R+
Sbjct: 213 KVVWTSALHTRFLEAVRKIGLERAVPKRILELMNMPGLTRENVASHLQKYRIFLRRVAEA 272
Query: 253 TLEAG 257
+ G
Sbjct: 273 SNSTG 277
>gi|147765741|emb|CAN73375.1| hypothetical protein VITISV_019100 [Vitis vinifera]
Length = 659
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 143/246 (58%), Gaps = 24/246 (9%)
Query: 35 CLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGFKLLELVGLE 94
CL I+ LR +Y+V + AL LR + F LV++DV+MP++DGF+ + V E
Sbjct: 33 CLSIVAGILRTRRYQVVTVKNPLDALATLRSGSDFFHLVVTDVHMPELDGFEFQKKVQEE 92
Query: 95 MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK---VDPKDQN 151
LPVVM+SA ++KG+ GA Y++KPV ++LKN WQ+ + +K VD +D
Sbjct: 93 FQLPVVMMSADDKESSMLKGLEAGAAFYIVKPVNYDDLKNIWQYAVGPRKDNSVDMQDVG 152
Query: 152 RSPHEFEKSYRKRKD---------------QDGEDEDEDG-----DDDGHENENSTTQKK 191
+P E E K D Q D + +D G EN ++ + K+
Sbjct: 153 PAPEE-ESPVEKTPDDPVDIESVSSVNEVNQSKRDPKKKASKRVIEDSGKENSDAVSPKR 211
Query: 192 PRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGN 251
+VVWT+ LHT+F+ AV +GL++AVPK+IL+LMN+ GLTRENVASHLQK+R+ L+R+
Sbjct: 212 TKVVWTSALHTRFLEAVRKIGLERAVPKRILELMNMPGLTRENVASHLQKYRIFLRRVAE 271
Query: 252 KTLEAG 257
+ G
Sbjct: 272 ASNSTG 277
>gi|356573692|ref|XP_003554991.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 315
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 140/231 (60%), Gaps = 11/231 (4%)
Query: 23 GMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDM 82
G+ V+AVDDD T L+I+++ +C Y V + A AL + EN++ D+++ DV++P+M
Sbjct: 13 GLWVVAVDDDTTILEIIKQMGFKCHYRVATFSDAPDALNYVLENKDRIDVILVDVHLPNM 72
Query: 83 DGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
DG++ L+ + E+D+PV+++S T V K I HGACDY KP + K W+HV +
Sbjct: 73 DGYEFLKHINKEIDIPVIIMSVDGSTSAVRKAITHGACDYWTKPFSENQFKIMWKHVAMK 132
Query: 143 KKVDPKDQNRSPHEFEKSY-----RKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWT 197
+ K Q + EF S + +K+ ++ D DD KKPR+ W
Sbjct: 133 AWNEKKLQKKDFSEFASSVLDANLKDQKEISSNSKESDVDD------CDAQPKKPRIAWK 186
Query: 198 TELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
ELH +F+ AV +GLDKA PKKIL++MN+ GLT+++VASHLQK+R LK+
Sbjct: 187 GELHCQFVKAVMHIGLDKAQPKKILEVMNIPGLTKDHVASHLQKYRFDLKK 237
>gi|449528748|ref|XP_004171365.1| PREDICTED: uncharacterized protein LOC101224737 [Cucumis sativus]
Length = 631
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 142/245 (57%), Gaps = 11/245 (4%)
Query: 19 KFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
K + + +L VDDD T L I+ LR C+Y+V + AL LR + FDLV++D++
Sbjct: 4 KLLVDIHILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTLRARKGYFDLVVTDLH 63
Query: 79 MPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
MP M+G +L + V E LPV+M+SA +++K + G Y++KP+ ++++K+ WQ+
Sbjct: 64 MPQMNGLQLQKKVMQEFKLPVIMMSADEKPSVILKSLEEGVAFYMVKPISLDDVKHVWQY 123
Query: 139 VIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDED-----------GDDDGHENENST 187
I K V P + + + S K +++ ++ +N +
Sbjct: 124 AITPKNVIPNQTTTTVIQRQLSIDKSSSSSTPCSEKEIIKSKSRSSKFKNNKAKQNSINI 183
Query: 188 TQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLK 247
+K +V+WT LH +F+ A+ L+GL KAVPKKIL+ MNV GLTRENVASHLQK+R+ LK
Sbjct: 184 PIRKSKVIWTNSLHNRFLQAIKLIGLHKAVPKKILEFMNVPGLTRENVASHLQKYRIFLK 243
Query: 248 RLGNK 252
R+ K
Sbjct: 244 RVAEK 248
>gi|31338862|dbj|BAC77081.1| B-type response regulator [Oryza glaberrima]
Length = 341
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/269 (40%), Positives = 150/269 (55%), Gaps = 20/269 (7%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
+P G+RVL +DDD + L ++E L +C Y+VT A+ + +N DLVISD +
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
P DG +L+ V + +P V++++ DT VMK + +GA D+LLKPVR+EEL N WQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGASDFLLKPVRIEELSNIWQHI 126
Query: 140 IRRKKVDPKDQNR--------SPHEFEKSYR----KRKDQDGED-----EDEDGDDDGHE 182
R++ D K+ N P R K E E+E DD +
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTKSTATEALLAPLENEVRDDMVNY 186
Query: 183 NENST---TQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHL 239
N T +K R+ WTT+LH +FI AVN LG DKAVPKKIL +M V+ LTRE VASHL
Sbjct: 187 NGEITDIRDLRKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHL 246
Query: 240 QKFRLSLKRLGNKTLEAGMVASVGSKDSS 268
QK+R+ LK+ T + G S + D +
Sbjct: 247 QKYRMQLKKSIPTTSKHGATLSSTALDKT 275
>gi|75327665|sp|Q7Y0W3.1|EHD1_ORYSI RecName: Full=Two-component response regulator EHD1; AltName:
Full=Protein EARLY HEADING DATE 1
gi|31338860|dbj|BAC77080.1| B-type response regulator [Oryza sativa Indica Group]
Length = 341
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/270 (39%), Positives = 150/270 (55%), Gaps = 22/270 (8%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
+P G+RVL +DDD + L ++E L +C Y+VT A+ + +N DLVISD +
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
P DG +L+ V + +P V++++ DT VMK + +GA D+LLKPVR+EEL N WQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 140 IRRKKVDPKDQN------------------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGH 181
R++ D K+ N R+ +S E+E DD +
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASL-APLENEVRDDMVN 185
Query: 182 ENENSTTQK---KPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASH 238
N T + K R+ WTT+LH +FI AVN LG DKAVPKKIL +M V+ LTRE VASH
Sbjct: 186 YNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH 245
Query: 239 LQKFRLSLKRLGNKTLEAGMVASVGSKDSS 268
LQK+R+ LK+ T + G S + D +
Sbjct: 246 LQKYRMQLKKSIPTTSKHGATLSSTALDKT 275
>gi|75327667|sp|Q7Y0W5.1|EHD1_ORYSJ RecName: Full=Two-component response regulator EHD1; AltName:
Full=Protein EARLY HEADING DATE 1
gi|31338856|dbj|BAC77078.1| B-type response regulator [Oryza sativa Japonica Group]
Length = 341
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/270 (39%), Positives = 150/270 (55%), Gaps = 22/270 (8%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
+P G+RVL +DDD + L ++E L +C Y+VT A+ + +N DLVISD +
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
P DG +L+ V + +P V++++ DT VMK + +GA D+LLKPVR+EEL N WQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 140 IRRKKVDPKDQN------------------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGH 181
R++ D K+ N R+ +S E+E DD +
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASL-APLENEVRDDMVN 185
Query: 182 ENENSTTQK---KPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASH 238
N T + K R+ WTT+LH +FI AVN LG DKAVPKKIL +M V+ LTRE VASH
Sbjct: 186 YNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH 245
Query: 239 LQKFRLSLKRLGNKTLEAGMVASVGSKDSS 268
LQK+R+ LK+ T + G S + D +
Sbjct: 246 LQKYRMQLKKSIPTTSKHGATLSSTALDKT 275
>gi|224136878|ref|XP_002322438.1| type-b response regulator [Populus trichocarpa]
gi|222869434|gb|EEF06565.1| type-b response regulator [Populus trichocarpa]
Length = 716
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 208/433 (48%), Gaps = 83/433 (19%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQYE---------VTVTNRAITALKMLRENRNNFDL 72
+ +++L VDDD T L I+ L+ C Y+ VTV N AL LR + FDL
Sbjct: 16 LKIKILVVDDDSTSLSIVSAMLKTCSYKENRKLELFVVTVKN-PFDALSTLRLKKGLFDL 74
Query: 73 VISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEEL 132
V++D++MP+M+G +L + V E LPV+++S+ K++++ + GA Y++KP+ ++L
Sbjct: 75 VVTDLHMPEMNGMELQQQVDEEFKLPVIIMSSDDSEKVILRTLEGGAAFYIVKPINKDDL 134
Query: 133 KNTWQHVIRRK---------KVDPKDQNRSPHEFEK-------------SYRKRKDQDGE 170
KN WQ+ + K ++ ++ S F++ + + ++D
Sbjct: 135 KNVWQYAVATKTGKYSLSIKEIGGSQESSSSTVFDQKISVDEVSSAKSTNIKICNEKDRI 194
Query: 171 DEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGL 230
+++ + E ++ KKP+VVWT LH++F+ A+N +GLDKAVPK+IL+ M+V GL
Sbjct: 195 NKNRKRTKEDQEVDSQLAPKKPKVVWTNSLHSRFLQAINHIGLDKAVPKRILEFMSVPGL 254
Query: 231 TRENVASHLQKFRLSLKR-----------LGNKTLEAGMVASVG--------------SK 265
+RENVASHLQK+R+ LK+ L + L++ +S S+
Sbjct: 255 SRENVASHLQKYRIFLKKVAERGTSSSKNLSGRALKSNFASSQPSLMLKNFQQEYSQFSR 314
Query: 266 DSSYLRIGALDGFGGS--------------HSVNSPGRLSSSALSSSYVPGSMIGRLNSS 311
LR GFGG+ HS N ++SAL S Y G
Sbjct: 315 QQQVLRASVQAGFGGNTIPTPDGGSNFGSLHSPNQQAPNNNSALQSPYKQSRSFGNPTGF 374
Query: 312 AGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRNSNLVQGVQTSLEPNQM-- 369
LS + + GL + NT N PA+R S + G+ P Q+
Sbjct: 375 QQLSFGNANQANKKRSGLESNNNTGTNP---------PASRES-VPNGLTHGKSPMQIYQ 424
Query: 370 PQSESTTHIGDFN 382
PQ++ +++ F+
Sbjct: 425 PQNQGRSNLQSFD 437
>gi|255539557|ref|XP_002510843.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223549958|gb|EEF51445.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 754
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 144/265 (54%), Gaps = 19/265 (7%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+++L VDDD L I+ L+ C +V + AL L+ + FDLVI+D++MP M+
Sbjct: 21 VQILIVDDDAPTLGIVSSMLKTCSLQVVTVKNPLDALSSLQSSDGAFDLVITDLHMPGMN 80
Query: 84 GFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK 143
G +L + + E +PVV++S+ +++ + GA Y++KPV + +LKN WQ+ + K
Sbjct: 81 GIQLQKQIDEEFKIPVVIMSSDGKRSAILESLESGAVYYMVKPVNLRDLKNVWQYAMASK 140
Query: 144 KVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENS----------------- 186
K P + ++D +++ +E N+
Sbjct: 141 KGKEVVVAEEPENNDGEASASTEKDSCEDNNSASVSANEESNNKKKKGKKRARDHDQGED 200
Query: 187 --TTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRL 244
+ KK +VVWT LH +F+ A+N +GLDKAVPK+IL+ MNV GLTRENVASHLQK+RL
Sbjct: 201 APSAPKKAKVVWTNSLHNRFLQAINHIGLDKAVPKRILEFMNVPGLTRENVASHLQKYRL 260
Query: 245 SLKRLGNKTLEAGMVASVGSKDSSY 269
LK++ + L + S + SS+
Sbjct: 261 FLKKVAERGLWSSQALSERAMRSSF 285
>gi|31338858|dbj|BAC77079.1| B-type response regulator [Oryza sativa Japonica Group]
Length = 341
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 149/270 (55%), Gaps = 22/270 (8%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
+P G+RVL +DDD + L ++E L +C Y+VT A+ + +N DLVISD +
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
P DG +L+ V + +P V++++ DT VMK + +GA D+LLKPVR+EEL N WQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 140 IRRKKVDPKDQN------------------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGH 181
R++ D K+ N R+ +S E+E DD +
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASL-APLENEVRDDMVN 185
Query: 182 ENENSTTQK---KPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASH 238
N T + K R+ WTT+LH +FI AVN L DKAVPKKIL +M V+ LTRE VASH
Sbjct: 186 YNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASH 245
Query: 239 LQKFRLSLKRLGNKTLEAGMVASVGSKDSS 268
LQK+R+ LK+ T + G S + D +
Sbjct: 246 LQKYRMQLKKSIPTTSKHGATLSSTALDKT 275
>gi|297792183|ref|XP_002863976.1| hypothetical protein ARALYDRAFT_357174 [Arabidopsis lyrata subsp.
lyrata]
gi|297309811|gb|EFH40235.1| hypothetical protein ARALYDRAFT_357174 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 144/236 (61%), Gaps = 15/236 (6%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+R+L D+D + L++LE L++ QY+VT+ N A+ LR +RN FD+ I
Sbjct: 35 FPEGLRMLVFDEDSSHLQMLETNLQKFQYQVTICNEENKAMYALRNHRNRFDIAIIQGNN 94
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
D D F+ L +G EMDLP++++S + VMK + +GA DYL+KP++ EEL+ ++H+
Sbjct: 95 SDGDMFRFLSEIGSEMDLPIIIISEDKSVQSVMKWMINGATDYLIKPIKPEELRIIFKHL 154
Query: 140 I-----RRKKVDPKDQNRSPHEFEKSY----------RKRKDQDGEDEDEDGDDDGHENE 184
+ RR V + + ++ E S RKR + +E+ D ++
Sbjct: 155 VKKVRERRSVVTGEAEEKAGGEKSSSVGDSTIRNPNKRKRSMCLDAEVNEEDRHDHNDRA 214
Query: 185 NSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
+ + KK RVVWT ELH KF+ AV LGLDKAVPKKIL+LMNVE L+RENVASHLQ
Sbjct: 215 CAASSKKRRVVWTKELHKKFVDAVEYLGLDKAVPKKILELMNVENLSRENVASHLQ 270
>gi|224130168|ref|XP_002320769.1| pseudo response regulator [Populus trichocarpa]
gi|222861542|gb|EEE99084.1| pseudo response regulator [Populus trichocarpa]
Length = 504
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 147/246 (59%), Gaps = 18/246 (7%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FPIG+R+L V+ D TCL+I+ K L+ YEVT RA AL++LRE + +L++ + +
Sbjct: 19 FPIGVRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDALRILREKEDEINLILIETRL 78
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
PDM+ +++LE +G LP+V+ SA ++ ++ + GA YL+KP+ ++KN WQ +
Sbjct: 79 PDMNQYEILETLGELSSLPIVVFSADNNESAMLGCLYKGAALYLMKPIIKNDVKNLWQ-L 137
Query: 140 IRRKKVDPKDQNRSPHEFEKSYRKRK----------------DQDGE-DEDEDGDDDGHE 182
R K+ + + F + K DQ G+ E E+ ++D +
Sbjct: 138 TYRTKIKTAVSGKGSNSFHGGSSEEKASSVTAGNPSSTMGMTDQKGKRKELEETNNDDED 197
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
N N T KK ++VWT ELH +F+ A+ +LG+D A PKKIL MNV GL +ENV+SHLQK+
Sbjct: 198 NNNLTVPKKRKLVWTNELHNRFLQAIRILGIDGAHPKKILQHMNVPGLKKENVSSHLQKY 257
Query: 243 RLSLKR 248
RL LKR
Sbjct: 258 RLYLKR 263
>gi|255541448|ref|XP_002511788.1| sensor histidine kinase, putative [Ricinus communis]
gi|223548968|gb|EEF50457.1| sensor histidine kinase, putative [Ricinus communis]
Length = 437
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 141/245 (57%), Gaps = 20/245 (8%)
Query: 23 GMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDM 82
G+ +L VD D CL I+ K L Y+V RA AL +LRE + DL++++V++PDM
Sbjct: 18 GVSILVVDCDSACLAIVSKMLYISGYKVITAKRATDALHILRERQYELDLILTEVHLPDM 77
Query: 83 DGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH--VI 140
D ++LLE + LP+V+LSA D ++ + GA YLLKP+ M ++K+ WQ V
Sbjct: 78 DKYELLETMAEVSCLPIVILSADDDENAMLGCLFKGAVFYLLKPITMNDVKSLWQFSCVK 137
Query: 141 RRKKVDPKDQNRSPH-----------------EFEKSYRKRKDQDGEDEDEDGDDDGHEN 183
RK + + S H + S + + +G+ E ++ D D
Sbjct: 138 NRKNNVATEGSHSYHGHSTPEIASNEASECLSVLDTSQQNAQKSEGK-ELQEMDKDEEAT 196
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFR 243
ST KKP+++WT ELH +F+ A+ +LG+D A PKKIL MNV GL +EN++SHLQK+R
Sbjct: 197 VTSTFPKKPKLIWTNELHDRFLQAIRILGIDSAHPKKILKHMNVPGLRKENISSHLQKYR 256
Query: 244 LSLKR 248
LSLKR
Sbjct: 257 LSLKR 261
>gi|15239829|ref|NP_199735.1| putative two-component response regulator-like APRR4 [Arabidopsis
thaliana]
gi|52783215|sp|Q9FJ16.1|APRR4_ARATH RecName: Full=Putative two-component response regulator-like APRR4;
AltName: Full=Pseudo-response regulator 4
gi|10177153|dbj|BAB10342.1| unnamed protein product [Arabidopsis thaliana]
gi|332008405|gb|AED95788.1| putative two-component response regulator-like APRR4 [Arabidopsis
thaliana]
Length = 292
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 147/240 (61%), Gaps = 24/240 (10%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL D+D + L ILE+ L++ QY+VT+ N A+ LR +RN FDL + V
Sbjct: 38 FPEGLRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNN 97
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
+ D F+ L +G EMDLP++++S K V K + +GA DYL+KP+R E+L+ ++H+
Sbjct: 98 AEGDIFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHL 157
Query: 140 IRRKKVDPKDQNRS--PHEFEKSYRKRKDQDGED--------------EDEDGDDDGHEN 183
+++ + + RS E EK+ ++ G+ E E ++D H++
Sbjct: 158 VKKMR-----ERRSVVTGEAEKAAGEKSSSVGDSTIRNPNKSKRSSCLEAEVNEEDRHDH 212
Query: 184 EN---STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
+ +++ KK RVVW ELH F+ AV+ LGL++AVPKKILD+M V+ ++RENVASHLQ
Sbjct: 213 NDRACASSAKKRRVVWDEELHQNFLNAVDFLGLERAVPKKILDVMKVDYISRENVASHLQ 272
>gi|224120138|ref|XP_002318254.1| type-b response regulator [Populus trichocarpa]
gi|222858927|gb|EEE96474.1| type-b response regulator [Populus trichocarpa]
Length = 658
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 138/258 (53%), Gaps = 29/258 (11%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYE--------VTVTNRAITALKMLRENRNNFDLVIS 75
+ +L VDDD T L ++ L+ Y+ V + AL +LR + FDLV+S
Sbjct: 17 IHILIVDDDSTSLSVVSATLKTVSYKDNRNLELIVVTVKKPFDALSILRLKKGLFDLVVS 76
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
D++MP+M+G +L + V E LPV+++S+ ++ + + GA Y++KP +LKN
Sbjct: 77 DLHMPEMNGMELQKQVEEEFKLPVIIMSSDESKNVISRSLEGGAAFYIVKPANKVDLKNV 136
Query: 136 WQHVIRRKKVDPKDQNRSPHEFEKSY---------------------RKRKDQDGEDEDE 174
W + + K + E SY KR ++G E+
Sbjct: 137 WHYAVAIKTGNSLSIKEIEGSREPSYSSTLVERLSLEDVNSATSINDEKRYRKNGRKEER 196
Query: 175 DGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTREN 234
D E ++ KKP+VVWT LH +F+ A+N +GLDKAVPK+IL+ M+V GL+REN
Sbjct: 197 KSTKDDQEVDSQPASKKPKVVWTNSLHNRFLLALNHIGLDKAVPKRILECMSVRGLSREN 256
Query: 235 VASHLQKFRLSLKRLGNK 252
+ASHLQK+R+ LK++ +
Sbjct: 257 IASHLQKYRIFLKKVAER 274
>gi|147782854|emb|CAN61302.1| hypothetical protein VITISV_003290 [Vitis vinifera]
Length = 594
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 142/261 (54%), Gaps = 42/261 (16%)
Query: 23 GMRVLAVDDDQTCLKILEKFLRECQYE--------------------------------- 49
+RV+ VDDD CL I+ L+ +Y+
Sbjct: 20 AIRVMVVDDDIICLSIVAGMLKTWKYQDMLNVVFCNFIKIIRQGCIRGEEASTRNGISSS 79
Query: 50 -VTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDT 108
V+V N A AL LR N F LV++DV+MP MDGF+ + V E +LPVVM+SA
Sbjct: 80 VVSVKN-AEDALITLRTRSNFFHLVVTDVHMPKMDGFEFQKQVREEFNLPVVMMSADDKE 138
Query: 109 KLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQD 168
+++G+ GA Y++KPV ++LK+ WQ+ + +K HE ++ R K +
Sbjct: 139 SSILRGLEAGAAFYIVKPVNYDDLKDLWQYALSPRKGSVS----VXHEEMQNKRDSKKKA 194
Query: 169 GEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVE 228
G+ +E + + E + +K +VVWTT LH F+ A+ +GL++AVPK+IL+ MN
Sbjct: 195 GKKVNEGNEQEKSE---AIVPRKSKVVWTTALHNDFLEAIRKIGLERAVPKRILEHMNEP 251
Query: 229 GLTRENVASHLQKFRLSLKRL 249
GLTRENVASHLQK+R+ LKR+
Sbjct: 252 GLTRENVASHLQKYRIFLKRV 272
>gi|224063953|ref|XP_002301318.1| predicted protein [Populus trichocarpa]
gi|222843044|gb|EEE80591.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 147/250 (58%), Gaps = 23/250 (9%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
F G+R+L V+ D TCL+I+ K L+ YEVT RA AL +LRE + +L++ + ++
Sbjct: 19 FAEGVRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDALHILREKEDEINLILIETHL 78
Query: 80 PDMDGFKLLELV-GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
PDMD ++++E V + LP+V+ SA ++ ++ + GA YL+KP+ ++KN WQ
Sbjct: 79 PDMDQYEIIETVRAMSSSLPIVVFSADNNVSAMLGWLYKGAALYLMKPIVKNDVKNLWQL 138
Query: 139 VIRRKKVDP-------------KDQNRS------PHEFEKSYRKRKDQDGEDEDEDGDDD 179
R+KK ++N S P S + DQ G+ ++ + D+
Sbjct: 139 TYRKKKKTAVSSVGSNSFHAGLAEENASSVTAGIPSLL--STTGQSDQMGKRKELEETDN 196
Query: 180 GHENENST-TQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASH 238
E+ ++ KKP +VWT ELH +F+ A+ +LG+D A PKKIL MNV GL +ENV+SH
Sbjct: 197 DDEDNDNLTVLKKPELVWTNELHNRFLQAIRILGVDGAHPKKILQHMNVSGLKKENVSSH 256
Query: 239 LQKFRLSLKR 248
LQK+RLSLKR
Sbjct: 257 LQKYRLSLKR 266
>gi|51038103|gb|AAT93906.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222631502|gb|EEE63634.1| hypothetical protein OsJ_18451 [Oryza sativa Japonica Group]
Length = 368
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 136/246 (55%), Gaps = 52/246 (21%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYE-VTVTNRAIT----------------ALKML 63
P+GMRVL +D+ T LKI+ K L C Y+ +TVTN IT A++ L
Sbjct: 22 PVGMRVLLIDESTTYLKIITKLLLNCGYKGLTVTNFEITYVWRVDEVTPKTAARDAVEEL 81
Query: 64 RENRNNFDLVISDVYMP-DMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDY 122
EN ++D+V+++V+ P +DGF LL+ G +MDLPVV+ SA D + V+K +N GACDY
Sbjct: 82 HENPWSYDMVLTEVHAPAGIDGFNLLQYAGTDMDLPVVVFSADDDKRTVLKCVNSGACDY 141
Query: 123 LLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHE 182
L+KP+R EELKN WQHV RRK +S +R G
Sbjct: 142 LVKPLRHEELKNIWQHVYRRKL--------------RSGGRRAAAAGN------------ 175
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+S + K R W ELH +F+ V LG+DKA P +IL L+N E LTR+ Q+F
Sbjct: 176 --SSKGEIKKRFRWPKELHERFVSVVLQLGVDKATPNQILPLLNREDLTRD------QRF 227
Query: 243 RLSLKR 248
R++L +
Sbjct: 228 RIALTK 233
>gi|294461183|gb|ADE76155.1| unknown [Picea sitchensis]
Length = 465
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 119/185 (64%), Gaps = 23/185 (12%)
Query: 98 PVVMLSAY----SDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK---------- 143
P +++SA DT +VMKGI HGACDY +KP+R+EEL+N WQHV+RR+
Sbjct: 7 PWIIVSAVMSTNGDTSVVMKGITHGACDYFIKPIRIEELRNIWQHVVRRRGRESLKDDLG 66
Query: 144 KVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTK 203
+ + ++ + SP E + +KRKD D ++ DD ++ K+ RV WT +LH +
Sbjct: 67 ECEDREASDSP---ETTSKKRKDTSSGDFSDEVIDD------ISSLKRARVHWTVQLHQQ 117
Query: 204 FIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVG 263
F+ AVN LG+DKAVPKKI+++M V+GL+RENVASHLQK+RL LKRL E VAS
Sbjct: 118 FVVAVNQLGIDKAVPKKIVEIMKVQGLSRENVASHLQKYRLYLKRLSGAISEPYPVASFQ 177
Query: 264 SKDSS 268
+ D S
Sbjct: 178 AADDS 182
>gi|297821174|ref|XP_002878470.1| hypothetical protein ARALYDRAFT_486765 [Arabidopsis lyrata subsp.
lyrata]
gi|297324308|gb|EFH54729.1| hypothetical protein ARALYDRAFT_486765 [Arabidopsis lyrata subsp.
lyrata]
Length = 431
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 148/269 (55%), Gaps = 40/269 (14%)
Query: 4 EEKGGSSSDEDGVIDKFPI-GMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKM 62
+E G +D+D ++FP +RVL VD D L ++ + + Y+VT A+
Sbjct: 23 DEIGSPINDDD---EEFPTTSIRVLLVDADSNSLLPMKNLMIQYSYQVTKYEDGEEAMAF 79
Query: 63 LRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDY 122
L +N+ DLVI D +MPD++G L +G EMDLPVV++S + VM+ I +GACD+
Sbjct: 80 LMKNKQEIDLVIWDFHMPDINGLDALNTIGKEMDLPVVIMSHDHKKETVMESIKYGACDF 139
Query: 123 LLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDG--EDEDEDGDDDG 180
L+KPV E + W+HV R++ KS + + G E + ++ DD G
Sbjct: 140 LVKPVSKEVIAVLWRHVYRKR-------------MSKSGLDKPGESGTVESDPDEYDDLG 186
Query: 181 HEN---------ENSTTQ-------KKPRVVWTTELHTKFIGAVNLLG-LDKAVPKKILD 223
+N +NS+ Q KKPR+ WTTELH KF AV LG L+KA PK IL
Sbjct: 187 QDNLYQSNEEGSKNSSDQKGEKPATKKPRMQWTTELHHKFEVAVEKLGSLEKAFPKTILK 246
Query: 224 L----MNVEGLTRENVASHLQKFRLSLKR 248
MNV+GLTR NVASHLQK+R + K+
Sbjct: 247 YMQEEMNVQGLTRNNVASHLQKYRQNSKQ 275
>gi|413943651|gb|AFW76300.1| putative two-component response regulator family protein [Zea mays]
Length = 378
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 110/170 (64%), Gaps = 17/170 (10%)
Query: 101 MLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKS 160
+LSA S+T+ +MKGI HGACDY++KPVR+E+L+ W HV++ + DP+ +
Sbjct: 15 VLSANSETRTIMKGIKHGACDYIVKPVRLEQLRGIWTHVVKNSRTDPRTSIIDSGS-DDD 73
Query: 161 YRKRKDQDGEDEDEDG----------------DDDGHENENSTTQKKPRVVWTTELHTKF 204
+K DG + D+ G D G +EN++ QKKPRV W +LH KF
Sbjct: 74 VQKLPSGDGGEGDKVGANRRKKKCSKKNKPAVDVAGGHSENTSAQKKPRVQWCGQLHRKF 133
Query: 205 IGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTL 254
+ AV+ +G+DKAVPKKIL+ MNVEG+TRENVASHLQK+R+ L++L TL
Sbjct: 134 VEAVHQIGIDKAVPKKILEAMNVEGITRENVASHLQKYRIYLRKLIEGTL 183
>gi|50400670|sp|Q9M9B9.2|ARR19_ARATH RecName: Full=Putative two-component response regulator ARR19
Length = 407
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 165/301 (54%), Gaps = 20/301 (6%)
Query: 10 SSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNN 69
+S+ ++ +FP VL VD + T L +++ +++ Y+V++ A AL L ++
Sbjct: 20 TSEITSLLSQFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHE 79
Query: 70 FDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRM 129
++VI D +MP +DG + L+ + ++DLPVV++S + T+ VMK +GACDY++KPV+
Sbjct: 80 INIVIWDFHMPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKE 139
Query: 130 EELKNTWQHVIRRKKV------DPKDQNRSPHEFEKSYRKRKDQDGEDEDE------DGD 177
E + N WQH++R++ + PK + F+ DG D D +G
Sbjct: 140 EVMANIWQHIVRKRLIFKPDVAPPKPRMTWSEVFQPVQSHLVPTDGLDRDHFDSITINGG 199
Query: 178 D--DGHENENSTTQKKPRVVWTTELHTKFIGAVNLL-GLDKAVPKKILDL---MNVEGLT 231
+ E + +KPR+ WT ELH KF+ A+ ++ G++KA PK +++ M +EG+T
Sbjct: 200 NGIQNMEKKQGKKPRKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGIT 259
Query: 232 RENVASHLQKFRLSLK--RLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGR 289
R NVASHLQK R++L+ ++ +T G + G+ S ++ S+ +N P
Sbjct: 260 RSNVASHLQKHRINLEENQIPQQTQGNGWATAYGTLAPSLQGSDNVNTTIPSYLMNGPAT 319
Query: 290 L 290
L
Sbjct: 320 L 320
>gi|412992344|emb|CCO20057.1| type-b response regulator [Bathycoccus prasinos]
Length = 580
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 95/123 (77%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL VDDD CLKI+ K L++C Y VT T ++TAL+ LR + FD+V+SDV+MPDMD
Sbjct: 12 LRVLVVDDDVLCLKIVTKMLQKCGYTVTSTTSSVTALEYLRTKKEEFDIVLSDVHMPDMD 71
Query: 84 GFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK 143
GFKLLE + L++D+PV+M+S +D +V++GI HGA DYLLKPVR+ ELKN WQHV+R+
Sbjct: 72 GFKLLEQIALDIDIPVLMMSVNADQSVVLRGIIHGAVDYLLKPVRIHELKNIWQHVVRKN 131
Query: 144 KVD 146
D
Sbjct: 132 GPD 134
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 55/60 (91%)
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
KKPRVVW+ ELH +F+ AVN LG+DKAVPK+ILDLMNV+GLTRENVASHLQK+RL LKRL
Sbjct: 340 KKPRVVWSAELHQQFVNAVNQLGIDKAVPKRILDLMNVQGLTRENVASHLQKYRLYLKRL 399
>gi|109631198|gb|ABG35775.1| SRR383 [Striga asiatica]
Length = 456
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 115/189 (60%), Gaps = 25/189 (13%)
Query: 110 LVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPH-EFEKSYRKRKDQD 168
+VMKG+ HGACDYL+KPVRME LKN WQHVIR+KK + K++ + E+S R+ K
Sbjct: 2 VVMKGVTHGACDYLIKPVRMEALKNIWQHVIRKKKYEWKEKEQEQSGSVEESERQPKP-- 59
Query: 169 GEDEDEDGDDDGHENEN-------------------STTQKKPRVVWTTELHTKFIGAVN 209
ED D +E N ++T KKPRVVW+ ELH +F+ AVN
Sbjct: 60 ---EDLDYSSSANEGNNWKSSKKRKDDDDEGDERDDTSTLKKPRVVWSVELHQQFVTAVN 116
Query: 210 LLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSY 269
LG+DKAVPKKIL+LM++ GLTRENVASHLQK+RL LKRL + +G D S+
Sbjct: 117 QLGIDKAVPKKILELMSIPGLTRENVASHLQKYRLYLKRLSGQHHNGLGNPFMGPTDPSF 176
Query: 270 LRIGALDGF 278
I L F
Sbjct: 177 GPITPLSSF 185
>gi|147798455|emb|CAN72192.1| hypothetical protein VITISV_005693 [Vitis vinifera]
Length = 790
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 133/255 (52%), Gaps = 32/255 (12%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
VL VD D T L + LR Y+V R AL M+ E ++ DLV+++++MPDMDG
Sbjct: 23 VLVVDCDPTSLMTISGMLRALTYQVVTVERVTDALAMILERKDEVDLVMTELHMPDMDGL 82
Query: 86 KLLELVGLEMDLPVV------------MLSAYSDTKLVMKGINHGACDYLLKPVRMEELK 133
+LL+ + LPVV ++SA ++ +++ +N GA Y+ KPV M +K
Sbjct: 83 QLLDEIQKTSKLPVVNFFFFLDGNGNPVMSADAEEDAMLRSLNKGATYYMXKPVEMGSIK 142
Query: 134 NTWQHVI--RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHEN-------- 183
N WQ+V RR K K + + E D D G++
Sbjct: 143 NLWQYVFLNRRDKQLQKTGQKGGVQVESLGENESDVDAGSALISNGKHGYQEPTTDTVET 202
Query: 184 ----------ENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
S +KK ++ WTTELH KF+ A+ LGLD A PKKIL LM VEGLT+E
Sbjct: 203 DKDDDDEEDTLTSPIRKKAKLTWTTELHDKFLLAIGELGLDNAHPKKILHLMGVEGLTKE 262
Query: 234 NVASHLQKFRLSLKR 248
+++SHLQK+RLS+KR
Sbjct: 263 HISSHLQKYRLSVKR 277
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 76/119 (63%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
VL VD D TCL I+ LR YEV +RA+ AL M E DLV+++++MPDM G
Sbjct: 523 VLVVDCDPTCLMIVSGMLRALTYEVLTVDRAVDALAMTLEGGCGVDLVMTELHMPDMYGL 582
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
LL+ + LPVV++SA S+ +++K + GA YL+KPV ME++ N WQ+V +R++
Sbjct: 583 DLLDEIRRTSKLPVVIMSADSNEDVMLKSLRRGAEYYLVKPVLMEDVTNFWQYVFKRRR 641
>gi|224120142|ref|XP_002318255.1| predicted protein [Populus trichocarpa]
gi|222858928|gb|EEE96475.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 125/230 (54%), Gaps = 21/230 (9%)
Query: 44 RECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLS 103
R + V + AL +LR + FDLV+SD++MP+M+G +L + V E LPV+++S
Sbjct: 10 RNLELIVVTVKKPFDALSILRLKKGLFDLVVSDLHMPEMNGMELQKQVEEEFKLPVIIMS 69
Query: 104 AYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSY-- 161
+ ++ + + GA Y++KP +LKN W + + K + E SY
Sbjct: 70 SDESKNVISRSLEGGAAFYIVKPANKVDLKNVWHYAVAIKTGNSLSIKEIEGSREPSYSS 129
Query: 162 -------------------RKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHT 202
KR ++G E+ D E ++ KKP+VVWT LH
Sbjct: 130 TLVERLSLEDVNSATSINDEKRYRKNGRKEERKSTKDDQEVDSQPASKKPKVVWTNSLHN 189
Query: 203 KFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNK 252
+F+ A+N +GLDKAVPK+IL+ M+V GL+REN+ASHLQK+R+ LK++ +
Sbjct: 190 RFLLALNHIGLDKAVPKRILECMSVRGLSRENIASHLQKYRIFLKKVAER 239
>gi|50400667|sp|Q9LZJ8.1|ARR20_ARATH RecName: Full=Putative two-component response regulator ARR20
gi|7362747|emb|CAB83117.1| putative protein [Arabidopsis thaliana]
Length = 426
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 135/235 (57%), Gaps = 14/235 (5%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
RVL V D L+ + + Y+VT A+ L +N++ DLVI D +MPD++G
Sbjct: 42 RVLLVGADSN--SSLKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIWDFHMPDING 99
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
L ++G +MDLPVV++S + VM+ I +GACD+L+KPV E + W+HV R++
Sbjct: 100 LDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYRKRM 159
Query: 145 ----VDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDD--GHENENSTTQKKPRVVWTT 198
+D ++ + Y + + + +E+G + H+ E S T KKPR+ WT
Sbjct: 160 SKSGLDKPGESGTVESDPDEYDDLEQDNLYESNEEGSKNTCDHKEEKSPT-KKPRMQWTP 218
Query: 199 ELHTKFIGAVNLLG-LDKAVPKKILDLM----NVEGLTRENVASHLQKFRLSLKR 248
ELH KF AV +G L+KA PK IL M NV+GLTR NVASHLQK+R S K+
Sbjct: 219 ELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVASHLQKYRQSSKK 273
>gi|334186214|ref|NP_191826.2| putative two-component response regulator ARR20 [Arabidopsis
thaliana]
gi|332646857|gb|AEE80378.1| putative two-component response regulator ARR20 [Arabidopsis
thaliana]
Length = 352
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 121/200 (60%), Gaps = 12/200 (6%)
Query: 60 LKMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGA 119
+ L +N++ DLVI D +MPD++G L ++G +MDLPVV++S + VM+ I +GA
Sbjct: 1 MAFLMKNKHEIDLVIWDFHMPDINGLDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGA 60
Query: 120 CDYLLKPVRMEELKNTWQHVIRRKK----VDPKDQNRSPHEFEKSYRKRKDQDGEDEDED 175
CD+L+KPV E + W+HV R++ +D ++ + Y + + + +E+
Sbjct: 61 CDFLVKPVSKEVIAVLWRHVYRKRMSKSGLDKPGESGTVESDPDEYDDLEQDNLYESNEE 120
Query: 176 GDDDG--HENENSTTQKKPRVVWTTELHTKFIGAVNLLG-LDKAVPKKILDLM----NVE 228
G + H+ E S T KKPR+ WT ELH KF AV +G L+KA PK IL M NV+
Sbjct: 121 GSKNTCDHKEEKSPT-KKPRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQ 179
Query: 229 GLTRENVASHLQKFRLSLKR 248
GLTR NVASHLQK+R S K+
Sbjct: 180 GLTRNNVASHLQKYRQSSKK 199
>gi|297741111|emb|CBI31842.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 112/189 (59%), Gaps = 18/189 (9%)
Query: 79 MPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
MP+MDGF+ LV E LPVVM+SA +++G+ GA Y++KPV ++LKN WQ+
Sbjct: 1 MPEMDGFEFQRLVHEEFHLPVVMMSADDKESSMLRGLEAGAAFYIVKPVNYDDLKNLWQY 60
Query: 139 VIRRKK------VDPKDQNRSPHEFEKS------------YRKRKDQDGEDEDEDGDDDG 180
+ KK + ++ + + EK+ ++D + + + +G
Sbjct: 61 AVGPKKGKSHIVMQEIERTQGASQLEKTSNNEVESLMNEEKHNKRDSKRKTLKKANEGNG 120
Query: 181 HENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
E + KK +V+WT+ LH +F+ A +GL++AVPK+IL++MNV GLTRENVASHLQ
Sbjct: 121 KEKSETVAPKKAKVIWTSALHNRFLEAARKIGLERAVPKRILEIMNVPGLTRENVASHLQ 180
Query: 241 KFRLSLKRL 249
K+R+ LKR+
Sbjct: 181 KYRIFLKRV 189
>gi|242034251|ref|XP_002464520.1| hypothetical protein SORBIDRAFT_01g019980 [Sorghum bicolor]
gi|241918374|gb|EER91518.1| hypothetical protein SORBIDRAFT_01g019980 [Sorghum bicolor]
Length = 302
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 117/202 (57%), Gaps = 20/202 (9%)
Query: 71 DLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRME 130
DL+ISDV P D +L+ V + D+P V++S+ D +VMK I GA D+L+KPVR+E
Sbjct: 12 DLIISDVCFPTEDSLLILQEVTTKFDIPTVIMSSNGDASIVMKYITSGASDFLIKPVRIE 71
Query: 131 ELKNTWQHVIRRKKV--DPKDQNRSPHEFEKSY-----------RKRKDQDGEDEDEDGD 177
LKN WQHV R++ + + N + H + SY + E +
Sbjct: 72 VLKNIWQHVFRKQLIGENRSCSNSAQHLDQVSYPPTIAPASTCATRTTGIITEAATATLE 131
Query: 178 DDGHENENSTTQ-----KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTR 232
E N T +K R+ WTT+LH +FI AVN LG +KAVPKKIL+ M V+ LTR
Sbjct: 132 SATRETTNGTVTDIQDLRKSRLSWTTQLHRQFIAAVNSLG-EKAVPKKILETMKVKHLTR 190
Query: 233 ENVASHLQKFRLSLKRLGNKTL 254
E VASHLQK+RL L++L N+TL
Sbjct: 191 EQVASHLQKYRLHLRKL-NQTL 211
>gi|242093736|ref|XP_002437358.1| hypothetical protein SORBIDRAFT_10g025500 [Sorghum bicolor]
gi|241915581|gb|EER88725.1| hypothetical protein SORBIDRAFT_10g025500 [Sorghum bicolor]
Length = 581
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 102/153 (66%), Gaps = 11/153 (7%)
Query: 113 KGINHGACDYLLKPVRMEELKNTWQHVIR------RKKVDPKDQNRS----PHEFEKSYR 162
K I HGAC Y++KPVR E +KN W HV+R R KV+ ++ N S P + EK
Sbjct: 6 KAIQHGACHYMVKPVRPEMVKNIWLHVVRKSKSNIRNKVNNRNDNPSQIGQPVDDEKDDA 65
Query: 163 KRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKIL 222
K + + +DGD ++E +TQKK RV WT +LH+KF+ A+N +G+D AVPKKIL
Sbjct: 66 KHTRKHCKKNRKDGDGS-EKDEVISTQKKQRVEWTRQLHSKFLEAINHIGMDNAVPKKIL 124
Query: 223 DLMNVEGLTRENVASHLQKFRLSLKRLGNKTLE 255
++MNV+G+T+ENVASHLQKFR+ LK+ TL+
Sbjct: 125 EVMNVDGITKENVASHLQKFRMYLKKQKEGTLK 157
>gi|413935897|gb|AFW70448.1| putative two-component response regulator family protein [Zea mays]
Length = 545
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 105/152 (69%), Gaps = 6/152 (3%)
Query: 182 ENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQK 241
EN +S++QKKPRVVW+ ELH KF+ AVN LG+DKAVPKKILDLMNVE +TRENVASHLQK
Sbjct: 116 ENGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRENVASHLQK 175
Query: 242 FRLSLKRL-GNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSYV 300
+RL LKRL + + +A + A+ G ++ +Y+ +G LD F N+ GR ++
Sbjct: 176 YRLYLKRLSADASRQANLTAAFGGRNPAYVNMG-LDAF---RQYNAYGRYRPVPTTNHSQ 231
Query: 301 PGSMIGRLNSSAGLSMHGIASSGMIKPGLSQS 332
P +++ R+NS A MHG+ S ++ G +Q+
Sbjct: 232 PNNLLARMNSPA-FGMHGLLPSQPLQIGHNQN 262
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 27/35 (77%)
Query: 15 GVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYE 49
G D+FP+GMRVLAVDDD TCLKILE L CQY
Sbjct: 17 GAKDQFPVGMRVLAVDDDPTCLKILENLLLRCQYH 51
>gi|125552240|gb|EAY97949.1| hypothetical protein OsI_19867 [Oryza sativa Indica Group]
Length = 315
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 96/151 (63%), Gaps = 6/151 (3%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
P+GMRVL +D+ T LKI+ K L C Y+VT A A++ L EN ++D+V+++V+ P
Sbjct: 22 PVGMRVLLIDESTTYLKIITKLLLNCGYKVTPKTAARDAVEELHENPWSYDMVLTEVHAP 81
Query: 81 -DMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
+DGF LL+ G +MDLPVV+ SA D + V+K +N GACDYL+KP+R EELKN WQHV
Sbjct: 82 AGIDGFNLLQYAGTDMDLPVVVFSADDDKRTVLKCVNSGACDYLVKPLRHEELKNIWQHV 141
Query: 140 IRRK-----KVDPKDQNRSPHEFEKSYRKRK 165
RR + N S E +K +R K
Sbjct: 142 YRRNLRSGGRRAAAAGNSSKGEIKKRFRWPK 172
>gi|212275528|ref|NP_001130318.1| uncharacterized protein LOC100191412 [Zea mays]
gi|194688832|gb|ACF78500.1| unknown [Zea mays]
Length = 471
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 127/233 (54%), Gaps = 27/233 (11%)
Query: 181 HENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
E + + KKPRVVW+ ELH KF+ AVN LG+DKAVPK+IL+LMNVE LTRENVASHLQ
Sbjct: 15 QEGDEPSAAKKPRVVWSIELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASHLQ 74
Query: 241 KFRLSLKRLGN-KTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSY 299
K+RL LKRL + +A +VA+ G +D +L +GA +G + S + A SS+
Sbjct: 75 KYRLYLKRLSAVASQQASIVAAFGGRD-PFLHMGAFEG------LQSYQPFAPCAALSSF 127
Query: 300 VP--GSMIGRLNSSA--------GLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFP 349
+P GS+ GR ++A +++ AS+GMI + + I +NQQ
Sbjct: 128 IPHHGSL-GRTTAAAFGVPELAPAITVQAAASNGMISHCAGDASKFQLSGIQENQQP--- 183
Query: 350 ANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVA 402
NL QG TSL Q+ Q GD + + S +A RVA
Sbjct: 184 -----NLGQGSATSLGLPQLQQKWIQQETGDLSAVFSGSALANTLSGALQRVA 231
>gi|374095508|sp|Q9LYP5.3|ARR21_ARATH RecName: Full=Putative two-component response regulator ARR21
Length = 613
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 140/274 (51%), Gaps = 43/274 (15%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPD 81
+ + V+ VDDD L I+ + L+ +Y V + AL L+ R+N DL+I+D YMP
Sbjct: 14 LKINVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRDNIDLIITDYYMPG 73
Query: 82 MDGFKLLELVGLEM-DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
M+G +L + + E +LPV+++S SDT + ++ GA ++ KP+ +L +Q +
Sbjct: 74 MNGLQLKKQITQEFGNLPVLVMS--SDTNKEEESLSCGAMGFIPKPIHPTDLTKIYQFAL 131
Query: 141 RRKK---------VDPKDQNRS--------PHEFEKSYRKRKD----------------- 166
K+ + KD + S P + + KRK+
Sbjct: 132 SNKRNGKSTLSTEQNHKDADVSVPQQITLVPEQADVLKTKRKNCSFKSDSRTVNSTNGSC 191
Query: 167 --QDGEDEDEDGDDDGHENEN----STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKK 220
DG ++ +G +++ S KK ++ WT LH F+ A+ +GLDKAVPKK
Sbjct: 192 VSTDGSRKNRKRKPNGGPSDDGESMSQPAKKKKIQWTDSLHDLFLQAIRHIGLDKAVPKK 251
Query: 221 ILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTL 254
IL M+V LTRENVASHLQK+R+ L+R+ + L
Sbjct: 252 ILAFMSVPYLTRENVASHLQKYRIFLRRVAEQGL 285
>gi|357521359|ref|XP_003630968.1| Two-component response regulator ARR11 [Medicago truncatula]
gi|355524990|gb|AET05444.1| Two-component response regulator ARR11 [Medicago truncatula]
Length = 674
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 127/243 (52%), Gaps = 15/243 (6%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP ++VL +D D L +EK L + Y+VT +A+ ++ + + +FDLV+ + M
Sbjct: 9 FPANVKVLVIDHDIHLLNAIEKKLSQFNYQVTTCWTVSSAMNLIAQ-KVHFDLVLLETQM 67
Query: 80 PDMDGFKLLELVGLEMDLPVVM-LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
PDMD F L+ + ++D+PV+M + + T ++ I +GACD +KP ++K W H
Sbjct: 68 PDMDSFDFLQQLTQQIDIPVIMTMCSEGSTTGILNAIENGACDCWVKPFSENQVKYMWHH 127
Query: 139 VIRRKKVDPKDQ--NRSPHEFEKSYRKRKDQDGEDEDED-----GDDDGHENENSTTQKK 191
+R+ K Q N R R D + DED + + + KK
Sbjct: 128 AVRKMMKGNKKQKINEQLGVEGSQIRARDDSNLCLNDEDIPEPPPTKKTKKRKKTKKTKK 187
Query: 192 PRVVWTTELHTKFIGAVNLL------GLDKAVPKKILDLMNVEGLTRENVASHLQKFRLS 245
RVVW+ ELH +F+ AV L KAVPK IL+ M V GLTRE V SHLQK+RL
Sbjct: 188 ERVVWSLELHEQFMKAVKELDASSSSSSSKAVPKTILEHMKVPGLTREQVGSHLQKYRLY 247
Query: 246 LKR 248
L +
Sbjct: 248 LNK 250
>gi|357503493|ref|XP_003622035.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355497050|gb|AES78253.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 602
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 121/217 (55%), Gaps = 17/217 (7%)
Query: 50 VTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTK 109
V A AL L+EN FDLVI++ ++ M+G + + + + +P++M+S +
Sbjct: 17 VVTAKDARHALITLQENEGLFDLVITEFHLVGMNGLEFQKHIKDQFQIPIIMMSEDNRPS 76
Query: 110 LVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDG 169
L+ K + +GA Y++KP E+ K+ W++V+ KK F +S R +++
Sbjct: 77 LISKTLENGAAQYIVKPFCAEDFKDIWKYVMEGKK---------EKLFIESLFVRNEEEE 127
Query: 170 EDEDEDGDDDGHENENSTTQ--------KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKI 221
+ + ++ +Q KK ++VWT LH F+ AVN +GL+KAVPKKI
Sbjct: 128 TSSEPKNKKKHCKRKSKESQGEKDIQVVKKQKLVWTPYLHKMFLLAVNQIGLEKAVPKKI 187
Query: 222 LDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGM 258
L++MN+ LTRENVASHLQK+R+ L+ + K + GM
Sbjct: 188 LEIMNIPNLTRENVASHLQKYRIFLRDVAEKGMVEGM 224
>gi|255547920|ref|XP_002515017.1| Two-component response regulator ARR14, putative [Ricinus communis]
gi|223546068|gb|EEF47571.1| Two-component response regulator ARR14, putative [Ricinus communis]
Length = 338
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 110/216 (50%), Gaps = 23/216 (10%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D FP G+RV+ VDDD T L ILE+ L+ C EVT A L +LRENR +D+VISDV
Sbjct: 11 DAFPAGLRVVVVDDDPTWLSILERMLKRCSCEVTTCCSARDVLALLRENRYGYDIVISDV 70
Query: 78 YMPDMDGFKLLELVG----LEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELK 133
MP MD F L +G E ++S + VM+GI GAC+YLLKP+RM+EL+
Sbjct: 71 IMPGMDVFLHLLFIGSMLLTEHLYRFTVISVDGERSRVMRGIQLGACEYLLKPIRMKELR 130
Query: 134 NTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGD----------DDGHEN 183
N QHV RRK D E + + + +G D+ G G E
Sbjct: 131 NICQHVFRRKIQKEID----IESIEGTIQVQMAINGLDKSNGGHLLCGENLTSVKIGKEV 186
Query: 184 ENSTTQKKPRVVWTTE-----LHTKFIGAVNLLGLD 214
+N K P ++T+ H KF AVN +G D
Sbjct: 187 QNKHDDKGPGGNFSTKKSAVIFHQKFDKAVNQIGPD 222
>gi|48210044|gb|AAT40543.1| Putative two-component response regulator protein, identical
[Solanum demissum]
Length = 352
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 26/226 (11%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+ +L V+DD T L ++ L++C Y+V I AL LR ++FDLV++DV+ D++
Sbjct: 15 ISILVVNDDATYLPVVAGLLKKCNYQVVTVKYPIDALSKLRIKGDSFDLVVTDVHKSDIN 74
Query: 84 GFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK 143
GF+L +++ ++PV+++SA ++KG+ + D
Sbjct: 75 GFELQQVITQAFEIPVLLMSADDKEGTILKGLKGVSVD---------------------- 112
Query: 144 KVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTK 203
D +DQ P + R +K G+ + G + N K +++WT LH
Sbjct: 113 --DQRDQ--GPCTALQVKRGKKPVPGKSAMKLGKQGKDNSVNFVLPTKSQIIWTDSLHNT 168
Query: 204 FIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
F+ A++ +G DKAVPKKI + M V GL+RENVASH QK+R+ L+R+
Sbjct: 169 FLEAISNIGFDKAVPKKIHEHMKVPGLSRENVASHWQKYRIYLRRV 214
>gi|255573419|ref|XP_002527635.1| transcription factor, putative [Ricinus communis]
gi|223532940|gb|EEF34706.1| transcription factor, putative [Ricinus communis]
Length = 478
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 141/292 (48%), Gaps = 55/292 (18%)
Query: 10 SSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNN 69
+++E FP G+RVL +++D + ++ L Y V++ AL + + +
Sbjct: 4 TANELSAWKDFPKGLRVLLLEEDSISAEEIKSKLEAMDYIVSLFCNENEALSAISDKPES 63
Query: 70 FDLVISDVYMPDMDG-FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVR 128
F + I +V + +G FK LE DLP +M S +MK I GA ++L KP+
Sbjct: 64 FHVAIVEVSTSNSNGNFKFLETAK---DLPTIMTSNIHCLSTMMKCIALGAVEFLRKPLS 120
Query: 129 MEELKNTWQHVI----------------------------------RRKKVDPKDQNRSP 154
E+L+N WQHV+ R+ K + +N SP
Sbjct: 121 EEKLRNIWQHVVHKAFNAGGNVVSDSLKPVNDSGASIPQLKVETEERKNKNLERTENVSP 180
Query: 155 ---HEFEKS-------------YRKRKDQDGEDEDEDGDDDGHENENS-TTQKKPRVVWT 197
+E+E+S ++ DG E+ + H++ + +KK +V WT
Sbjct: 181 AHENEYEQSPLSDKYPAPSTPQLKQGASSDGSAENPNKASRHHKSYGTKVNRKKMKVDWT 240
Query: 198 TELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
ELH KF+ AV LG+D+A+P +IL++M VEGLTR NVASHLQKFR+ + +
Sbjct: 241 PELHKKFVQAVEQLGVDQAIPSRILEMMKVEGLTRHNVASHLQKFRMHKRHI 292
>gi|414865597|tpg|DAA44154.1| TPA: putative two-component response regulator family protein [Zea
mays]
Length = 114
Score = 126 bits (317), Expect = 2e-26, Method: Composition-based stats.
Identities = 55/81 (67%), Positives = 68/81 (83%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP+GM+VL VDDD TCL +L++ L EC+Y+VT +A AL MLRENR FD++ISDV+M
Sbjct: 11 FPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHM 70
Query: 80 PDMDGFKLLELVGLEMDLPVV 100
PDMDGF+LLELVGLEMDLPV+
Sbjct: 71 PDMDGFRLLELVGLEMDLPVI 91
>gi|15240724|ref|NP_196338.1| putative two-component response regulator ARR21 [Arabidopsis
thaliana]
gi|7546699|emb|CAB87277.1| putative protein [Arabidopsis thaliana]
gi|332003739|gb|AED91122.1| putative two-component response regulator ARR21 [Arabidopsis
thaliana]
Length = 621
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 140/282 (49%), Gaps = 51/282 (18%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQYE--------VTVTNRAITALKMLRENRNNFDLV 73
+ + V+ VDDD L I+ + L+ +Y V + AL L+ R+N DL+
Sbjct: 14 LKINVMVVDDDHVFLDIMSRMLQHSKYRDPSVMEIAVIAVDDPKKALSTLKIQRDNIDLI 73
Query: 74 ISDVYMPDMDGFKLLELVGLEM-DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEEL 132
I+D YMP M+G +L + + E +LPV+++S SDT + ++ GA ++ KP+ +L
Sbjct: 74 ITDYYMPGMNGLQLKKQITQEFGNLPVLVMS--SDTNKEEESLSCGAMGFIPKPIHPTDL 131
Query: 133 KNTWQHVIRRKK---------VDPKDQNRS--------PHEFEKSYRKRKD--------- 166
+Q + K+ + KD + S P + + KRK+
Sbjct: 132 TKIYQFALSNKRNGKSTLSTEQNHKDADVSVPQQITLVPEQADVLKTKRKNCSFKSDSRT 191
Query: 167 ----------QDGEDEDEDGDDDGHENEN----STTQKKPRVVWTTELHTKFIGAVNLLG 212
DG ++ +G +++ S KK ++ WT LH F+ A+ +G
Sbjct: 192 VNSTNGSCVSTDGSRKNRKRKPNGGPSDDGESMSQPAKKKKIQWTDSLHDLFLQAIRHIG 251
Query: 213 LDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTL 254
LDKAVPKKIL M+V LTRENVASHLQK+R+ L+R+ + L
Sbjct: 252 LDKAVPKKILAFMSVPYLTRENVASHLQKYRIFLRRVAEQGL 293
>gi|297806747|ref|XP_002871257.1| hypothetical protein ARALYDRAFT_325337 [Arabidopsis lyrata subsp.
lyrata]
gi|297317094|gb|EFH47516.1| hypothetical protein ARALYDRAFT_325337 [Arabidopsis lyrata subsp.
lyrata]
Length = 625
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 138/280 (49%), Gaps = 51/280 (18%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQY--------EVTVTNRAITALKMLRENRNNFDLV 73
+ + V+ VDDD+ L IL + L +Y V + AL L+ R++ DL+
Sbjct: 14 LRINVMVVDDDRVFLNILSRMLERSKYIDPSVMKITVVAVDDPKKALSTLKIQRDHIDLI 73
Query: 74 ISDVYMPDMDGFKLLELVGLEM-DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEEL 132
I+D YMP M+G +L + + E +LPV+++S SD + ++ GA ++ KP+ +L
Sbjct: 74 ITDYYMPSMNGLQLKKQITQEFGNLPVLVMS--SDPNKEQESLSCGAMGFIPKPIEPADL 131
Query: 133 KNTWQHVIRRK---------KVDPKDQNRS--------PHEFEKSYRKRKD--------- 166
+Q + K + + KD N S P + K+K+
Sbjct: 132 TKIYQFALTYKMNGKSTLLTEQNHKDANVSVPQQITLIPEQANVLKTKKKNCSSKSDSRT 191
Query: 167 ----------QDGEDEDEDGDDDGHENENSTT----QKKPRVVWTTELHTKFIGAVNLLG 212
DG ++ +G +++ + KK ++ WT LH F+ A+ +G
Sbjct: 192 VNSTNGSCVSTDGSRKNRKRKPNGGPSDDGESLLQPAKKKKITWTDSLHDLFLQAIRHIG 251
Query: 213 LDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNK 252
LDKAVPKKIL MNV LTRENVASHLQK+R+ L+R+ ++
Sbjct: 252 LDKAVPKKILAFMNVSYLTRENVASHLQKYRIFLRRVADQ 291
>gi|326522516|dbj|BAK07720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 135/280 (48%), Gaps = 25/280 (8%)
Query: 12 DEDGVIDKFPI---GMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRN 68
D+D ID+ + G++VLAVDDD L+ L + LR C YEVT ALK L +N +
Sbjct: 6 DQDMAIDEMMVETEGLKVLAVDDDPVYLRTLTQTLRRCGYEVTAKPSPAEALKELEKNPD 65
Query: 69 NFDLVISDVYM--PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKP 126
FD V++ MDGF LL +G + V++ S + +G GAC KP
Sbjct: 66 GFDFVMTAALTRGRGMDGFDLLNRIGERYPV-VILFSGEESMETRRRGTQGGACYLAEKP 124
Query: 127 VRMEELKNTWQHVIRRKK----------VDPKDQNRSPHEFEKSYRKR-KDQDGEDEDED 175
+R ++ WQHV+R ++ +P+ + H E + RKR + + + +
Sbjct: 125 MRDTQIYMIWQHVLRWRRENAAGVVAANANPRPSSEGGH-LEDTPRKRGRGVNDSGKGKG 183
Query: 176 GDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLL---GLDKAVPKKILDLMNVEG--L 230
D G + T KK + WT+E+H F+ AV L G D P I + + V+G L
Sbjct: 184 ASDGGGVQPVTNTTKKKKFEWTSEMHELFVSAVTQLKETGGD--TPNNIREFLEVDGIYL 241
Query: 231 TRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYL 270
T V+SHLQK+R + G T+ + + S +YL
Sbjct: 242 TTTQVSSHLQKYRRDCRTGGQSTMPSSRPSHSNSTSKNYL 281
>gi|388458730|gb|AFK31231.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 104/188 (55%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENST---TQKKPRVVWTTEL 200
R+ +S E+E DD + N T +K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRNLRKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G+
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGVTL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458694|gb|AFK31213.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 104/188 (55%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGQITDIRNLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G+
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGVTL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458626|gb|AFK31179.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458628|gb|AFK31180.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458634|gb|AFK31183.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458636|gb|AFK31184.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458640|gb|AFK31186.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458662|gb|AFK31197.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458666|gb|AFK31199.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458684|gb|AFK31208.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458696|gb|AFK31214.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458700|gb|AFK31216.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458702|gb|AFK31217.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458704|gb|AFK31218.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458706|gb|AFK31219.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458756|gb|AFK31244.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458758|gb|AFK31245.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458760|gb|AFK31246.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 104/188 (55%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G+
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGVTL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458680|gb|AFK31206.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 103/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSAALDKT 187
>gi|388458622|gb|AFK31177.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 104/188 (55%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G+
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGVTL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|218184693|gb|EEC67120.1| hypothetical protein OsI_33927 [Oryza sativa Indica Group]
gi|388458618|gb|AFK31175.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 102/187 (54%), Gaps = 20/187 (10%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN-----RSPHE 156
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N P
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 157 FEKSYRKRKDQDGED------------EDEDGDDDGHENENSTTQK---KPRVVWTTELH 201
+ + E+E DD + N T + K R+ WTT+LH
Sbjct: 61 PPSTLAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVAS 261
+FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G S
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKQGATLS 180
Query: 262 VGSKDSS 268
+ D +
Sbjct: 181 STALDKT 187
>gi|388458692|gb|AFK31212.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 102/187 (54%), Gaps = 20/187 (10%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNR--------S 153
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 154 PHEFEKSYRKRKDQDGED---------EDEDGDDDGHENENSTTQK---KPRVVWTTELH 201
P R E+E DD + N T + K R+ WTT+LH
Sbjct: 61 PPSILAMARATPATTRSTAIEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVAS 261
+FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G+ S
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGVTLS 180
Query: 262 VGSKDSS 268
+ D +
Sbjct: 181 STALDKT 187
>gi|15225844|ref|NP_180275.1| putative two-component response regulator ARR13 [Arabidopsis
thaliana]
gi|3885337|gb|AAC77865.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330252838|gb|AEC07932.1| putative two-component response regulator ARR13 [Arabidopsis
thaliana]
Length = 575
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 136/280 (48%), Gaps = 62/280 (22%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQY-EVTV--TNRAITALKMLRENRNNFDLVISDVY 78
+ + V+ VDD++ L I + L + +Y E+TV + AL L+ R+N DL+I+D Y
Sbjct: 14 LKINVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYY 73
Query: 79 MPDMDGFKLLELVGLEM-DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
MP M+G +L + + E +L V+++S SD + ++ GA ++ KP+ +L +Q
Sbjct: 74 MPGMNGLQLKKQITQEFGNLSVLVMS--SDPNKEEESLSCGAMGFIPKPIAPTDLPKIYQ 131
Query: 138 HVIRRKK---------VDPKDQNRS-PHEF----EKSY---------------------- 161
+ K+ + KD N S P + E++Y
Sbjct: 132 FALTYKRNGKSTLSTEQNQKDANVSVPQQIMLVPEQAYVLKTKKKNCSSKSDTRTVNSTN 191
Query: 162 ------------RKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVN 209
RKRK + G DDG S KK ++ WT L F+ A+
Sbjct: 192 VSHVSTNGSRKNRKRKPKGGPS------DDGESL--SQPPKKKKIWWTNPLQDLFLQAIQ 243
Query: 210 LLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
+G DK VPKKIL +MNV LTRENVASHLQK+RL +KR+
Sbjct: 244 HIGYDKVVPKKILAIMNVPYLTRENVASHLQKYRLFVKRV 283
>gi|388458740|gb|AFK31236.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 104/188 (55%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPSH 60
Query: 152 ---------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQ--KKPRVVWTTEL 200
+P + + E+E D D + E + + +K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRD-DMVNYNGEITDIRDLRKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458698|gb|AFK31215.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 104/188 (55%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSMLAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKA+PKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G+
Sbjct: 120 HRQFIAAVNHLGEDKAIPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGVTL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458710|gb|AFK31221.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 104/188 (55%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G+
Sbjct: 120 HRQFIAAVNHLGGDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGVTL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458752|gb|AFK31242.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 103/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T G+
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSNHGVTL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458688|gb|AFK31210.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 104/188 (55%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G+
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSILTTSKHGVTL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|50400707|sp|Q9ZVD3.2|ARR13_ARATH RecName: Full=Putative two-component response regulator ARR13
Length = 572
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 136/280 (48%), Gaps = 62/280 (22%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQY-EVTV--TNRAITALKMLRENRNNFDLVISDVY 78
+ + V+ VDD++ L I + L + +Y E+TV + AL L+ R+N DL+I+D Y
Sbjct: 14 LKINVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYY 73
Query: 79 MPDMDGFKLLELVGLEM-DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
MP M+G +L + + E +L V+++S SD + ++ GA ++ KP+ +L +Q
Sbjct: 74 MPGMNGLQLKKQITQEFGNLSVLVMS--SDPNKEEESLSCGAMGFIPKPIAPTDLPKIYQ 131
Query: 138 HVIRRKK---------VDPKDQNRS-PHEF----EKSY---------------------- 161
+ K+ + KD N S P + E++Y
Sbjct: 132 FALTYKRNGKSTLSTEQNQKDANVSVPQQIMLVPEQAYVLKTKKKNCSSKSDTRTVNSTN 191
Query: 162 ------------RKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVN 209
RKRK + G DDG S KK ++ WT L F+ A+
Sbjct: 192 VSHVSTNGSRKNRKRKPKGGPS------DDGESL--SQPPKKKKIWWTNPLQDLFLQAIQ 243
Query: 210 LLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
+G DK VPKKIL +MNV LTRENVASHLQK+RL +KR+
Sbjct: 244 HIGYDKVVPKKILAIMNVPYLTRENVASHLQKYRLFVKRV 283
>gi|388458732|gb|AFK31232.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 103/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458612|gb|AFK31172.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458614|gb|AFK31173.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458654|gb|AFK31193.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458660|gb|AFK31196.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458668|gb|AFK31200.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458670|gb|AFK31201.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458676|gb|AFK31204.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458678|gb|AFK31205.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458682|gb|AFK31207.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458690|gb|AFK31211.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458726|gb|AFK31229.1| Ehd1, partial [Oryza rufipogon]
gi|388458746|gb|AFK31239.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 103/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458754|gb|AFK31243.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 103/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458674|gb|AFK31203.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458712|gb|AFK31222.1| Ehd1, partial [Oryza nivara]
gi|388458718|gb|AFK31225.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 101/187 (54%), Gaps = 20/187 (10%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNR--------S 153
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 154 PHEFEKSYRKRKDQD---------GEDEDEDGDDDGHENENSTTQK---KPRVVWTTELH 201
P R E+E DD + N T + K R+ WTT+LH
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVAS 261
+FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G S
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATLS 180
Query: 262 VGSKDSS 268
+ D +
Sbjct: 181 STALDKT 187
>gi|388458632|gb|AFK31182.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 103/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458722|gb|AFK31227.1| Ehd1, partial [Oryza officinalis]
gi|388458744|gb|AFK31238.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 101/187 (54%), Gaps = 20/187 (10%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNR--------S 153
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 154 PHEFEKSYRKRKDQD---------GEDEDEDGDDDGHENENSTTQK---KPRVVWTTELH 201
P R E+E DD + N T + K R+ WTT+LH
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVAS 261
+FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G S
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATLS 180
Query: 262 VGSKDSS 268
+ D +
Sbjct: 181 STALDKT 187
>gi|388458748|gb|AFK31240.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 103/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILSMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|22758332|gb|AAN05536.1| putative response regulator protein [Oryza sativa Japonica Group]
gi|222612965|gb|EEE51097.1| hypothetical protein OsJ_31808 [Oryza sativa Japonica Group]
gi|388458638|gb|AFK31185.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458708|gb|AFK31220.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458724|gb|AFK31228.1| Ehd1, partial [Oryza rufipogon]
gi|388458728|gb|AFK31230.1| Ehd1, partial [Oryza rufipogon]
gi|388458736|gb|AFK31234.1| Ehd1, partial [Oryza rufipogon]
gi|388458750|gb|AFK31241.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 103/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458742|gb|AFK31237.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 20/167 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNR--------S 153
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 154 PHEFEKSYRKRKDQD---------GEDEDEDGDDDGHENENSTTQK---KPRVVWTTELH 201
P R E+E DD + N T + K R+ WTT+LH
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
+FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRVQLKK 167
>gi|388458658|gb|AFK31195.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 102/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R + D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFREQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458672|gb|AFK31202.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 102/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R + D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRTQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458630|gb|AFK31181.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 103/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN L DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G+
Sbjct: 120 HRQFIAAVNHLAEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGVTL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458716|gb|AFK31224.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 101/187 (54%), Gaps = 20/187 (10%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNR--------S 153
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 154 PHEFEKSYRKRKDQD---------GEDEDEDGDDDGHENENSTTQK---KPRVVWTTELH 201
P R E+E DD + N T + K R+ WTT+LH
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVAS 261
+FI AVN LG DKAVPKK+L +M V+ LTRE VASHLQK+R+ LK+ T + G S
Sbjct: 121 RQFIAAVNRLGEDKAVPKKMLGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATLS 180
Query: 262 VGSKDSS 268
+ D +
Sbjct: 181 STALDKT 187
>gi|388458738|gb|AFK31235.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 103/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D ++ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHENNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458608|gb|AFK31170.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 104/188 (55%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEK-- 159
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N EK
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKN-NSMVGNLEKPG 59
Query: 160 --------------SYRKRKDQD--GEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
+ R + E+E DD + N T + K R+ WTT+L
Sbjct: 60 HPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458714|gb|AFK31223.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 100/187 (53%), Gaps = 20/187 (10%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNR--------S 153
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 154 PHEFEKSYRKRKDQD---------GEDEDEDGDDDGHENENSTTQK---KPRVVWTTELH 201
P R E+E DD + N T + K R+ WTT+LH
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVAS 261
+FI AVN LG DKAVPKKIL +M + LTRE VASHLQK+R+ LK+ T + G S
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKAKHLTREQVASHLQKYRMQLKKSIPTTSKHGATLS 180
Query: 262 VGSKDSS 268
+ D +
Sbjct: 181 STALDKT 187
>gi|388458656|gb|AFK31194.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 103/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ +++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFQKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458734|gb|AFK31233.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 103/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL ++ V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIIKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458686|gb|AFK31209.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 103/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EE N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEEPSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G+
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGVTL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458610|gb|AFK31171.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 100/187 (53%), Gaps = 20/187 (10%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------R 152
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 153 SPHEFEKSYRKRKDQDGED--------EDEDGDDDGHENENSTTQK---KPRVVWTTELH 201
P + E+E DD + N T + K R+ WT +LH
Sbjct: 61 PPSILATARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTAQLH 120
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVAS 261
+FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G S
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATLS 180
Query: 262 VGSKDSS 268
+ D +
Sbjct: 181 STALDKT 187
>gi|388458720|gb|AFK31226.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 100/187 (53%), Gaps = 20/187 (10%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNR--------S 153
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 154 PHEFEKSYRKRKDQD---------GEDEDEDGDDDGHENENSTTQK---KPRVVWTTELH 201
P R E+E DD + N + K R+ WTT+LH
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEIMDIRDLGKSRLTWTTQLH 120
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVAS 261
+FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G S
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATLS 180
Query: 262 VGSKDSS 268
+ D +
Sbjct: 181 STALDKT 187
>gi|357488511|ref|XP_003614543.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355515878|gb|AES97501.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 304
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 118/229 (51%), Gaps = 40/229 (17%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+ V+A+D D T L +E+ C Y+VT N A AL +L E ++ FD+++ D +M
Sbjct: 10 FPDGLNVIAIDHDTTFLNTIEEMCNRCHYQVTKCNTASEALNLL-ERKDCFDVMLIDAHM 68
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
P+MD + ++ ++++PV+ S V K I +GAC+Y KP+ E+ K WQHV
Sbjct: 69 PNMDAYDFVQHATGQLNIPVISNS-------VTKSITYGACEYWTKPLYEEQFKIMWQHV 121
Query: 140 IRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTE 199
R+ + K + +RKR + DDD N KKPR++
Sbjct: 122 ARKGLRENKKHKSVGSLDVQGHRKR----------ERDDD-----NVPNVKKPRLM---- 162
Query: 200 LHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
+F KA PK IL +++ GL+ +VASHLQK+R LKR
Sbjct: 163 ---QF----------KAKPKVILKRIDIHGLSAGHVASHLQKYRNYLKR 198
>gi|388458664|gb|AFK31198.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 102/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+E L N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEGLSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458616|gb|AFK31174.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 102/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPV +EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVGIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458620|gb|AFK31176.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 102/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKA PKK+L +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLGEDKAAPKKMLGVMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458642|gb|AFK31187.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458646|gb|AFK31189.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458648|gb|AFK31190.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458650|gb|AFK31191.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458652|gb|AFK31192.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 102/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN L DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|388458644|gb|AFK31188.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 102/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN L DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDRT 187
>gi|413943652|gb|AFW76301.1| hypothetical protein ZEAMMB73_695347 [Zea mays]
Length = 106
Score = 115 bits (287), Expect = 8e-23, Method: Composition-based stats.
Identities = 53/87 (60%), Positives = 68/87 (78%), Gaps = 3/87 (3%)
Query: 17 IDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNN---FDLV 73
+ FP G+RVL VDDD+ CLK+LE+ L+ C Y V V A TAL+MLRE +++ FDLV
Sbjct: 3 VKTFPAGLRVLVVDDDRVCLKVLERQLKCCNYNVMVVTDARTALEMLRERKDDGDQFDLV 62
Query: 74 ISDVYMPDMDGFKLLELVGLEMDLPVV 100
ISDV MP+MDGF+LLEL+G+EMDLPV+
Sbjct: 63 ISDVVMPNMDGFELLELIGVEMDLPVI 89
>gi|356511480|ref|XP_003524454.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 480
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 130/289 (44%), Gaps = 62/289 (21%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G++VL ++ D + L Y V+ AL + +F + I +V
Sbjct: 14 FPKGLKVLLLERDNISAAEIRAKLEAMDYNVSTFCEENEALSAISSGLESFHIAIVEVSS 73
Query: 80 PD-MDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
GFK LE DLP +M S +MK I GA ++L KP+ ++L+N WQH
Sbjct: 74 SSGQGGFKFLENAK---DLPTIMTSNNHCLNTMMKCIALGAVEFLRKPLSEDKLRNIWQH 130
Query: 139 VIRR-------------KKV-------------DPKDQNRSPHEFEKSYR---------- 162
V+ + K V D + ++R + EK R
Sbjct: 131 VVHKAFNARASILSESLKPVKESVVSMLQLQTDDEQHESRVSRDIEKVSRFVDNDHELSS 190
Query: 163 ----------------KRKDQDGEDEDEDGDDDGHENENSTT------QKKPRVVWTTEL 200
R DG+ +++ G E+ +S + QKK +V WT EL
Sbjct: 191 GNDKYPAPSTPQLRQGTRLLDDGDCQEQTNCSTGKESVHSDSCEIRGNQKKIKVDWTPEL 250
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
H F+ AV LG+D+A+P +IL+LM VEGLTR NVASHLQK+R+ +++
Sbjct: 251 HKTFVKAVEQLGIDQAIPSRILELMKVEGLTRHNVASHLQKYRMHKRQI 299
>gi|357458949|ref|XP_003599755.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|357469643|ref|XP_003605106.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355488803|gb|AES70006.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355506161|gb|AES87303.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 247
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 12/166 (7%)
Query: 70 FDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRM 129
FD+++ D MP+MD ++ V L++ +P +M++ S +MK I GAC+Y KP+
Sbjct: 39 FDVMLIDARMPNMDACDFVQHVSLQLQIPAIMMAVDSTKNSIMKSIECGACEYWTKPLIE 98
Query: 130 EELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQ 189
++ K WQHV R+ + K+ ++ RKR G ED D + H
Sbjct: 99 KKFKTMWQHVARKGMPENKEYAIVGSSMVQANRKR----GR-EDADASKETHA------- 146
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENV 235
K R W+ ELH +F+ AVN LGLDKA PKKI +M+V +T+E+V
Sbjct: 147 KTARFSWSPELHQRFLWAVNQLGLDKATPKKIQKIMDVPNMTKEHV 192
>gi|388458624|gb|AFK31178.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 103/188 (54%), Gaps = 22/188 (11%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N QH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIRQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVA 260
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G+
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGVTL 179
Query: 261 SVGSKDSS 268
S + D +
Sbjct: 180 SSTALDKT 187
>gi|110289209|gb|AAP54164.2| myb-like DNA-binding domain, SHAQKYF class family protein [Oryza
sativa Japonica Group]
Length = 256
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 103/191 (53%), Gaps = 25/191 (13%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK---KPRVVWTTEL 200
R+ +S E+E DD + N T + K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ---KFRLSLKRLGNKTLEAG 257
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQ K+R+ LK+ T + G
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQVHIKYRMQLKKSIPTTSKHG 179
Query: 258 MVASVGSKDSS 268
S + D +
Sbjct: 180 ATLSSTALDKT 190
>gi|326530738|dbj|BAK01167.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 473
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 86/130 (66%), Gaps = 5/130 (3%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+++++ KKPRVVW+ ELH KF+ AVN LG+DKAVPK+IL+LMNVE LTRENVASHLQK+
Sbjct: 23 HDDASASKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASHLQKY 82
Query: 243 RLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSYVPG 302
RL L+RL + +A+ +L +GA +G HS + P + SA S+ P
Sbjct: 83 RLYLRRLSAVASQQASIAAAFGGRDPFLHMGAFEGL---HSYHQP--FAPSASLPSFNPH 137
Query: 303 SMIGRLNSSA 312
++ +++A
Sbjct: 138 GLLSGASAAA 147
>gi|414589528|tpg|DAA40099.1| TPA: hypothetical protein ZEAMMB73_417245 [Zea mays]
Length = 899
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 63/84 (75%), Gaps = 3/84 (3%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNR---AITALKMLRENRNNFDLVI 74
D+FP+GMRVLAVDDD TCLK+LE L CQY T + ++LRE ++ FD VI
Sbjct: 89 DQFPVGMRVLAVDDDPTCLKVLENLLFRCQYHGTSPDNNGPGSHCPELLREKKDQFDPVI 148
Query: 75 SDVYMPDMDGFKLLELVGLEMDLP 98
S+V+MPDMDGFKLLELVGLEMDLP
Sbjct: 149 SNVHMPDMDGFKLLELVGLEMDLP 172
>gi|414589529|tpg|DAA40100.1| TPA: hypothetical protein ZEAMMB73_417245 [Zea mays]
Length = 443
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
Query: 5 EKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNR---AITALK 61
E G D+FP+GMRVLAVDDD TCLK+LE L CQY T + +
Sbjct: 76 EAAGKGQRRPRPKDQFPVGMRVLAVDDDPTCLKVLENLLFRCQYHGTSPDNNGPGSHCPE 135
Query: 62 MLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLP 98
+LRE ++ FD VIS+V+MPDMDGFKLLELVGLEMDLP
Sbjct: 136 LLREKKDQFDPVISNVHMPDMDGFKLLELVGLEMDLP 172
>gi|345286299|gb|AEN79472.1| B-type response regulator, partial [Oryza barthii]
Length = 159
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 89/159 (55%), Gaps = 20/159 (12%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNR--------S 153
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGASDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 154 PHEFEKSYRKR----KDQDGED-----EDEDGDDDGHENENSTT---QKKPRVVWTTELH 201
P R K E E+E DD + N T +K R+ WTT+LH
Sbjct: 61 PPSILAMARATPATTKSTATEALLAPLENEVRDDMVNYNGEITDIRDLRKSRLTWTTQLH 120
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
+FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286297|gb|AEN79471.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 87/159 (54%), Gaps = 20/159 (12%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNR--------S 153
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 154 PHEFEKSYRKRKDQDGED---------EDEDGDDDGHENENST---TQKKPRVVWTTELH 201
P R E+E DD + N T +K R+ WTT+LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLRKSRLTWTTQLH 120
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
+FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286261|gb|AEN79453.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
gi|345286295|gb|AEN79470.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 87/159 (54%), Gaps = 20/159 (12%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNR--------S 153
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 154 PHEFEKSYRKRKDQDGED---------EDEDGDDDGHENENSTTQK---KPRVVWTTELH 201
P R E+E DD + N T + K R+ WTT+LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
+FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286263|gb|AEN79454.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
Length = 159
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 88/159 (55%), Gaps = 20/159 (12%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN-----RSPHE 156
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N P
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 157 FEKSYRKRKDQDGED------------EDEDGDDDGHENENSTTQK---KPRVVWTTELH 201
+ + E+E DD + N T + K R+ WTT+LH
Sbjct: 61 PPSTLAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
+FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286269|gb|AEN79457.1| B-type response regulator, partial [Oryza sativa]
Length = 159
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 87/159 (54%), Gaps = 20/159 (12%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNR--------S 153
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 154 PHEFEKSYRKRKDQD---------GEDEDEDGDDDGHENENSTTQK---KPRVVWTTELH 201
P R E+E DD + N T + K R+ WTT+LH
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
+FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286283|gb|AEN79464.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 87/159 (54%), Gaps = 20/159 (12%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNR--------S 153
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 154 PHEFEKSYRKRKDQDGED---------EDEDGDDDGHENENSTTQK---KPRVVWTTELH 201
P R E+E DD + N T + K R+ WTT+LH
Sbjct: 61 PPSILAMARATPATTRSTTTEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
+FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286277|gb|AEN79461.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 89/160 (55%), Gaps = 22/160 (13%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTT---QKKPRVVWTTEL 200
R+ +S E+E DD + N T +K R+ WTT+L
Sbjct: 61 PPSILAMARATPATTRSTATEASL-APLENEVRDDMVNYNGKITDIRDLRKSRLTWTTQL 119
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
H +FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|84570629|dbj|BAE72699.1| pseudo-response regulator 95 homologue [Lemna paucicostata]
Length = 448
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 87/132 (65%), Gaps = 7/132 (5%)
Query: 18 DKFPIGMRV--LAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
+KF GMRV L V+ D + KI+ LR+C Y+V+ + + A K L+E+ NN DLV++
Sbjct: 23 EKFLRGMRVRVLLVEADDSTRKIVAALLRKCSYKVSSASDGLEAWKTLKESPNNIDLVLT 82
Query: 76 DVYMPDMDGFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEE 131
+V +P++ G+ LL ++ +E D +PV+M+S+ K+V + + GA D+L+KP+R E
Sbjct: 83 EVELPNVSGYALLSMM-MEHDSCKSIPVIMMSSRDSMKMVFECMLKGAADFLVKPIRKNE 141
Query: 132 LKNTWQHVIRRK 143
L+N WQHV RR+
Sbjct: 142 LRNLWQHVWRRQ 153
>gi|168027173|ref|XP_001766105.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
gi|162682748|gb|EDQ69164.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
Length = 1056
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V+DD ++ LR C YEVT A +L E +NFDLV++DV MP +
Sbjct: 306 LKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLLEEANSNFDLVLTDVVMPYLS 365
Query: 84 GFKLL-ELVGLEM--DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL +++ E +P+V++S+Y +V + ++ GACDYL+KPVR ELKN WQHV
Sbjct: 366 GVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNELKNLWQHVW 425
Query: 141 RR 142
R+
Sbjct: 426 RK 427
>gi|345286259|gb|AEN79452.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
gi|345286265|gb|AEN79455.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
gi|345286273|gb|AEN79459.1| B-type response regulator, partial [Oryza sativa]
gi|345286285|gb|AEN79465.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 87/159 (54%), Gaps = 20/159 (12%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNR--------S 153
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 154 PHEFEKSYRKRKDQDGED---------EDEDGDDDGHENENSTTQK---KPRVVWTTELH 201
P R E+E DD + N T + K R+ WTT+LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
+FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|168009969|ref|XP_001757677.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690953|gb|EDQ77317.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 197
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 78/137 (56%), Gaps = 16/137 (11%)
Query: 129 MEELKNTWQHVIRRKK---------------VDPKDQNRSPHEFEKSYRKRKDQDGEDED 173
M +L T HV R + DP D + K+ RK D D ED D
Sbjct: 37 MPDLAKTAAHVSRETRPSLLDLRVQSSISMSFDPGDDSSKGGGSAKNARKLADSDFEDTD 96
Query: 174 EDGDD-DGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTR 232
G + +E N+ T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LMNVEGLTR
Sbjct: 97 SGGGPVNSNEEANARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMNVEGLTR 156
Query: 233 ENVASHLQKFRLSLKRL 249
ENVASHLQK+RL LKR+
Sbjct: 157 ENVASHLQKYRLYLKRM 173
>gi|325910798|dbj|BAJ83829.1| circadian response regulator 2b [Physcomitrella patens subsp.
patens]
Length = 917
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V+DD ++ LR C YEVT A +L E +NFDLV++DV MP +
Sbjct: 186 LKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLLEEANSNFDLVLTDVVMPYLS 245
Query: 84 GFKLL-ELVGLEM--DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL +++ E +P+V++S+Y +V + ++ GACDYL+KPVR ELKN WQHV
Sbjct: 246 GVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNELKNLWQHVW 305
Query: 141 RR 142
R+
Sbjct: 306 RK 307
>gi|297847198|ref|XP_002891480.1| hypothetical protein ARALYDRAFT_474061 [Arabidopsis lyrata subsp.
lyrata]
gi|297337322|gb|EFH67739.1| hypothetical protein ARALYDRAFT_474061 [Arabidopsis lyrata subsp.
lyrata]
Length = 530
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 104/192 (54%), Gaps = 6/192 (3%)
Query: 10 SSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNN 69
+S+ ++ +FP VL VD + T L +++ +++ Y+VT+ A AL L ++
Sbjct: 20 TSEITSLLSQFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVTIETDAEKALAYLTSCKHE 79
Query: 70 FDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRM 129
++VI D +MP +DG + L+ +G +MDLPVV++S + T+ VMK +GACDY++KPV+
Sbjct: 80 INIVIWDFHMPGIDGLQALKSIGSKMDLPVVIMSDDNQTESVMKATINGACDYVVKPVKE 139
Query: 130 EELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQ 189
E + N WQH++R+ + P DG D+ +D D +E
Sbjct: 140 EVIANIWQHIVRKILM------SKPDVVPPVQSDLAQSDGLDQGQDKADFKIVDEEPNIN 193
Query: 190 KKPRVVWTTELH 201
+KP + T E+
Sbjct: 194 EKPLITRTEEIQ 205
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 26/132 (19%)
Query: 182 ENENSTTQKKPRVVWTTELHTKFIGAVNLLG-LDKAVPKKILDL---MNVEGLTRENVAS 237
E + + +KPR+ WT +LH KF+ A+ ++G ++KA PK +LD M VEG+TR NVAS
Sbjct: 325 EKKEAKKPRKPRMTWTEDLHQKFLEAIEIVGGIEKANPKVLLDCLLEMKVEGITRSNVAS 384
Query: 238 HLQKFRLSLK--RLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSAL 295
HLQK R++L+ ++ +T E DG+ +++ +P S +
Sbjct: 385 HLQKHRINLEENQIPEETQE--------------------DGWSTAYNRPAPSLQGSDNV 424
Query: 296 SSSYVPGSMIGR 307
+++ P M GR
Sbjct: 425 NTTISPYLMNGR 436
>gi|226875201|gb|ACO88948.1| cytokinin B-type response regulator 5 [Vitis vinifera]
Length = 81
Score = 108 bits (270), Expect = 6e-21, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 63/81 (77%)
Query: 32 DQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGFKLLELV 91
D T LKILEK L++C YEVT+ A AL +LRE ++ +D+VISDV MPDMDGFKLLELV
Sbjct: 1 DPTWLKILEKMLKKCLYEVTICGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLELV 60
Query: 92 GLEMDLPVVMLSAYSDTKLVM 112
GLEMDLPV+M+S +T VM
Sbjct: 61 GLEMDLPVIMMSVDGETSRVM 81
>gi|168009967|ref|XP_001757676.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690952|gb|EDQ77316.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 193
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 159 KSYRKRKDQDGEDEDEDGDD-DGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAV 217
K+ RK D D ED D G + +E N+ T K+PR+VWT +LH +F+ AV LG+ AV
Sbjct: 78 KNARKLADSDFEDTDSGGGPVNSNEEANARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAV 137
Query: 218 PKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
PK I+ LMNVEGLTRENVASHLQK+RL LKR+
Sbjct: 138 PKTIMQLMNVEGLTRENVASHLQKYRLYLKRM 169
>gi|345286281|gb|AEN79463.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 87/159 (54%), Gaps = 20/159 (12%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK--KPRVVWTTELH 201
R+ +S + + D + E + + K R+ WTT+LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLSPLENEVRYDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
+FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|15222067|ref|NP_175345.1| protein response regulator 19 [Arabidopsis thaliana]
gi|332194281|gb|AEE32402.1| protein response regulator 19 [Arabidopsis thaliana]
Length = 608
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 106/196 (54%), Gaps = 16/196 (8%)
Query: 10 SSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNN 69
+S+ ++ +FP VL VD + T L +++ +++ Y+V++ A AL L ++
Sbjct: 20 TSEITSLLSQFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHE 79
Query: 70 FDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRM 129
++VI D +MP +DG + L+ + ++DLPVV++S + T+ VMK +GACDY++KPV+
Sbjct: 80 INIVIWDFHMPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKE 139
Query: 130 EELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGED----EDEDGDDDGHENEN 185
E + N WQH++R++ + D P + + + R DQ D EDE
Sbjct: 140 EVMANIWQHIVRKRLIFKPDV-APPVQSDPARSDRLDQVKADFKIVEDE----------- 187
Query: 186 STTQKKPRVVWTTELH 201
+ P + WT E+
Sbjct: 188 PIINETPLITWTEEIQ 203
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLK-- 247
+KPR+ WT ELH KF+ A+ ++G + V + L M +EG+TR NVASHLQK R++L+
Sbjct: 419 RKPRMTWTEELHQKFLEAIEIIGANPKVLVECLQEMRIEGITRSNVASHLQKHRINLEEN 478
Query: 248 RLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRL 290
++ +T G + G+ S ++ S+ +N P L
Sbjct: 479 QIPQQTQGNGWATAYGTLAPSLQGSDNVNTTIPSYLMNGPATL 521
>gi|7770351|gb|AAF69721.1|AC016041_26 F27J15.4 [Arabidopsis thaliana]
Length = 612
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 106/196 (54%), Gaps = 16/196 (8%)
Query: 10 SSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNN 69
+S+ ++ +FP VL VD + T L +++ +++ Y+V++ A AL L ++
Sbjct: 20 TSEITSLLSQFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHE 79
Query: 70 FDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRM 129
++VI D +MP +DG + L+ + ++DLPVV++S + T+ VMK +GACDY++KPV+
Sbjct: 80 INIVIWDFHMPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKE 139
Query: 130 EELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGED----EDEDGDDDGHENEN 185
E + N WQH++R++ + D P + + + R DQ D EDE
Sbjct: 140 EVMANIWQHIVRKRLIFKPDV-APPVQSDPARSDRLDQVKADFKIVEDE----------- 187
Query: 186 STTQKKPRVVWTTELH 201
+ P + WT E+
Sbjct: 188 PIINETPLITWTEEIQ 203
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 6/107 (5%)
Query: 190 KKPRVVWTTELHTKFIGAVNLL-GLDKAVPKKILDL---MNVEGLTRENVASHLQKFRLS 245
+KPR+ WT ELH KF+ A+ ++ G++KA PK +++ M +EG+TR NVASHLQK R++
Sbjct: 419 RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQKHRIN 478
Query: 246 LK--RLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRL 290
L+ ++ +T G + G+ S ++ S+ +N P L
Sbjct: 479 LEENQIPQQTQGNGWATAYGTLAPSLQGSDNVNTTIPSYLMNGPATL 525
>gi|334183176|ref|NP_001185179.1| protein response regulator 19 [Arabidopsis thaliana]
gi|332194282|gb|AEE32403.1| protein response regulator 19 [Arabidopsis thaliana]
Length = 622
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 106/196 (54%), Gaps = 16/196 (8%)
Query: 10 SSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNN 69
+S+ ++ +FP VL VD + T L +++ +++ Y+V++ A AL L ++
Sbjct: 20 TSEITSLLSQFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHE 79
Query: 70 FDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRM 129
++VI D +MP +DG + L+ + ++DLPVV++S + T+ VMK +GACDY++KPV+
Sbjct: 80 INIVIWDFHMPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKE 139
Query: 130 EELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGED----EDEDGDDDGHENEN 185
E + N WQH++R++ + D P + + + R DQ D EDE
Sbjct: 140 EVMANIWQHIVRKRLIFKPDV-APPVQSDPARSDRLDQVKADFKIVEDE----------- 187
Query: 186 STTQKKPRVVWTTELH 201
+ P + WT E+
Sbjct: 188 PIINETPLITWTEEIQ 203
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 41/55 (74%), Gaps = 4/55 (7%)
Query: 190 KKPRVVWTTELHTKFIGAVNLL-GLDKAVPKKILDL---MNVEGLTRENVASHLQ 240
+KPR+ WT ELH KF+ A+ ++ G++KA PK +++ M +EG+TR NVASHLQ
Sbjct: 419 RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQ 473
>gi|18407171|ref|NP_566085.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
gi|52783231|sp|Q8L500.2|APRR9_ARATH RecName: Full=Two-component response regulator-like APRR9; AltName:
Full=Pseudo-response regulator 9
gi|9247022|gb|AAF86253.1|AF272040_1 timing of CAB expression 1-like protein [Arabidopsis thaliana]
gi|10281000|dbj|BAB13741.1| pseudo-response regulator 9 [Arabidopsis thaliana]
gi|20197322|gb|AAC33497.2| expressed protein [Arabidopsis thaliana]
gi|62320652|dbj|BAD95319.1| hypothetical protein [Arabidopsis thaliana]
gi|330255660|gb|AEC10754.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
Length = 468
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 81/123 (65%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C Y+V + + A ++L+E +N DL+++++ +P +
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSIS 96
Query: 84 GFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
GF LL LV +E + +PV+M+S+ K+V+K + GA DYL+KP+R ELKN WQHV
Sbjct: 97 GFALLALV-MEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHV 155
Query: 140 IRR 142
RR
Sbjct: 156 WRR 158
>gi|345286275|gb|AEN79460.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286279|gb|AEN79462.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286287|gb|AEN79466.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286289|gb|AEN79467.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286291|gb|AEN79468.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286293|gb|AEN79469.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 87/159 (54%), Gaps = 20/159 (12%)
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQN---------- 151
+++ DT VMK + +GA D+LLKPVR+EEL N WQH+ R++ D K+ N
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 --------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK--KPRVVWTTELH 201
R+ +S + + D + E + + K R+ WTT+LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRYDMVNYNGEITDIRDLGKSRLTWTTQLH 120
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
+FI AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|297824763|ref|XP_002880264.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
gi|297326103|gb|EFH56523.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
Length = 476
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 81/123 (65%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C Y+V + + A ++L+E +N DL+++++ +P +
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSIS 96
Query: 84 GFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
GF LL LV +E + +PV+M+S+ K+V+K + GA DYL+KP+R ELKN WQHV
Sbjct: 97 GFALLALV-MEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHV 155
Query: 140 IRR 142
RR
Sbjct: 156 WRR 158
>gi|218196749|gb|EEC79176.1| hypothetical protein OsI_19863 [Oryza sativa Indica Group]
Length = 385
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 6/122 (4%)
Query: 50 VTVTNRAITALKMLRENRNNFDLVISDVYMP-DMDGFKLLELVGLEMDLPVVMLSAYSDT 108
VT A A++ L EN ++D+V+++V+ P +DGF LL+ G +MDLPVV+ SA D
Sbjct: 6 VTPKTAARDAVEELHENPWSYDMVLTEVHAPAGIDGFNLLQYAGTDMDLPVVVFSADDDK 65
Query: 109 KLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK-----KVDPKDQNRSPHEFEKSYRK 163
+ V+K +N GACDYL+KP+R EELKN WQHV RRK + N S E +K +R
Sbjct: 66 RTVLKCVNSGACDYLVKPLRHEELKNIWQHVYRRKLRSGGRRAAAAGNSSKGEIKKRFRW 125
Query: 164 RK 165
K
Sbjct: 126 PK 127
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 99 VVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK 143
+++ S D +VM+ + +GACDY++KP+ E +K W+HV+R +
Sbjct: 143 LLVFSEGEDVVMVMRTVMNGACDYMVKPMTSEAIKFIWKHVLRWR 187
>gi|242093584|ref|XP_002437282.1| hypothetical protein SORBIDRAFT_10g024170 [Sorghum bicolor]
gi|241915505|gb|EER88649.1| hypothetical protein SORBIDRAFT_10g024170 [Sorghum bicolor]
Length = 158
Score = 106 bits (265), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/98 (56%), Positives = 69/98 (70%), Gaps = 5/98 (5%)
Query: 8 GSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENR 67
+ + E+ D FP G+RVLAV+ D+ C KILE+ L+ C Y T+ A TAL MLRE +
Sbjct: 17 AAKTGEEMAADTFPAGLRVLAVEHDRVCSKILERQLKYCNYNATMVTNAQTALDMLRERK 76
Query: 68 ---NNFDLVISDVYM--PDMDGFKLLELVGLEMDLPVV 100
N FDLVIS+V M P+MDGFKLLEL+GLEMDLPV+
Sbjct: 77 EYGNQFDLVISNVAMPKPNMDGFKLLELIGLEMDLPVI 114
>gi|168032210|ref|XP_001768612.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680111|gb|EDQ66550.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 185
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 76/114 (66%), Gaps = 6/114 (5%)
Query: 141 RRKKVDPKDQNRSPHEFE--KSYRKRKDQDGEDEDED---GDDDGHENENSTTQKKPRVV 195
R +D + Q SP FE +++RKD G +D D G + +E N+ T K+PR+V
Sbjct: 52 RASFLDSQVQRFSPMSFEALPLFKERKDA-GNAKDTDSGGGPVNSNEETNARTLKRPRLV 110
Query: 196 WTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
WT +LH +F+ AV LG+ AVPK I+ LMNVEGLTRENVASHLQK+RL LKR+
Sbjct: 111 WTPQLHKRFVDAVGHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRM 164
>gi|413956105|gb|AFW88754.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 743
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D + +++ LR+C YEV + A + L + +NN DLV+++V+MP +
Sbjct: 83 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMPCLS 142
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + D+PV+M+S +V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 143 GIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 202
Query: 141 RR 142
RR
Sbjct: 203 RR 204
>gi|226505594|ref|NP_001146641.1| uncharacterized protein LOC100280240 [Zea mays]
gi|219888151|gb|ACL54450.1| unknown [Zea mays]
gi|323388721|gb|ADX60165.1| PseuodARR-B transcription factor [Zea mays]
gi|413956104|gb|AFW88753.1| two-component response regulator-like PRR73 [Zea mays]
Length = 766
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D + +++ LR+C YEV + A + L + +NN DLV+++V+MP +
Sbjct: 83 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMPCLS 142
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + D+PV+M+S +V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 143 GIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 202
Query: 141 RR 142
RR
Sbjct: 203 RR 204
>gi|449524812|ref|XP_004169415.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 794
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 3/164 (1%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V++D + ++ LR C YEV + A KML + N+ DLV+++V MP +
Sbjct: 89 LKVLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKMLEDLTNHIDLVLTEVVMPCLS 148
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S++ LV K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 149 GIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 208
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENE 184
RR + S + +KS + + + ++ DD+ +NE
Sbjct: 209 RRCHSSSGSGSESGTQTQKSVKSKSVEKSDNNTGSNDDEEEDNE 252
>gi|325910792|dbj|BAJ83826.1| circadian response regulator 1a [Physcomitrella patens subsp.
patens]
Length = 907
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L V+ D ++ LR C YEVT A +L + +NFDLV++DV MP +
Sbjct: 183 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDVVMPRLS 242
Query: 84 GFKLL-ELVGLEM--DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL +++ E +P+V++S+Y +V + ++ GACDYL+KPVR EL+N WQHV
Sbjct: 243 GVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHVW 302
Query: 141 RR 142
R+
Sbjct: 303 RK 304
>gi|258678906|dbj|BAI39993.1| pseudo-response regulator homolog protein [Physcomitrella patens
subsp. patens]
Length = 907
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L V+ D ++ LR C YEVT A +L + +NFDLV++DV MP +
Sbjct: 183 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDVVMPRLS 242
Query: 84 GFKLL-ELVGLEM--DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL +++ E +P+V++S+Y +V + ++ GACDYL+KPVR EL+N WQHV
Sbjct: 243 GVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHVW 302
Query: 141 RR 142
R+
Sbjct: 303 RK 304
>gi|359490833|ref|XP_003634174.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 688
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C Y+V + A ++L+ +N DL++++V +P +
Sbjct: 40 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVLKARPHNIDLILTEVELPSIS 99
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
GF LL LV + ++PV+M+S++ V K + GA D+L+KPVR ELKN WQHV
Sbjct: 100 GFALLTLVMEHEICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPVRRNELKNLWQHVW 159
Query: 141 RRK 143
RR+
Sbjct: 160 RRQ 162
>gi|302143985|emb|CBI23090.3| unnamed protein product [Vitis vinifera]
Length = 747
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C Y+V + A ++L+ +N DL++++V +P +
Sbjct: 40 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVLKARPHNIDLILTEVELPSIS 99
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
GF LL LV + ++PV+M+S++ V K + GA D+L+KPVR ELKN WQHV
Sbjct: 100 GFALLTLVMEHEICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPVRRNELKNLWQHVW 159
Query: 141 RRK 143
RR+
Sbjct: 160 RRQ 162
>gi|84570631|dbj|BAE72700.1| pseudo-response regulator 37 homologue [Lemna gibba]
Length = 623
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V++D + ++ LR C YEVT + A K L NN D+V+++V MP +
Sbjct: 77 LKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKFLENLSNNVDIVLTEVVMPSLT 136
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL+ + M L PV+M+S++ +V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 137 GIGLLDKIMSHMTLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 196
Query: 141 RR 142
RR
Sbjct: 197 RR 198
>gi|281308386|gb|ADA58341.1| pseudo-response regulator 5a [Brassica rapa]
Length = 497
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 101/181 (55%), Gaps = 19/181 (10%)
Query: 14 DGVI--DKF--PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNN 69
DG++ ++F I +RVL V+ D + +I+ LR+C Y V + A +ML+ N +
Sbjct: 41 DGLVKWERFLPKIALRVLLVEADDSTRQIISALLRKCSYRVAAVPDGLKAWEMLKGNPES 100
Query: 70 FDLVISDVYMPDMDGFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINHGACDYLLK 125
DL++++V +P + G+ LL L+ +E D +PV+M+S + V K + GA DYL+K
Sbjct: 101 VDLILAEVDLPSISGYALLTLI-MEHDVCKNIPVIMMSTHDSVNTVYKCMLKGAADYLVK 159
Query: 126 PVRMEELKNTWQHVIRRK---------KVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDG 176
P+R EL+N WQHV RR+ ++D +R P E +S R + +GE D +
Sbjct: 160 PLRRNELRNLWQHVWRRRQSTLAPGSFQLDESLGHRKP-EGAQSSCTRPETEGESADVEK 218
Query: 177 D 177
D
Sbjct: 219 D 219
>gi|15238463|ref|NP_200765.1| myb family transcription factor [Arabidopsis thaliana]
gi|8885561|dbj|BAA97491.1| unnamed protein product [Arabidopsis thaliana]
gi|26449790|dbj|BAC42018.1| ARR1 like protein [Arabidopsis thaliana]
gi|71067052|dbj|BAE16278.1| putative transcription factor [Arabidopsis thaliana]
gi|109946485|gb|ABG48421.1| At5g59570 [Arabidopsis thaliana]
gi|332009824|gb|AED97207.1| myb family transcription factor [Arabidopsis thaliana]
Length = 298
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 66/100 (66%), Gaps = 6/100 (6%)
Query: 162 RKRKDQDG------EDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDK 215
+K+K DG ED + D G E+ + T K+PR+VWT +LH +F+ V LG+
Sbjct: 106 KKQKKSDGGEAAAVEDSTAEEGDSGPEDASGKTSKRPRLVWTPQLHKRFVDVVAHLGIKN 165
Query: 216 AVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLE 255
AVPK I+ LMNVEGLTRENVASHLQK+RL LKR+ T E
Sbjct: 166 AVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLTTE 205
>gi|21593668|gb|AAM65635.1| ARR1 protein-like [Arabidopsis thaliana]
Length = 298
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 66/100 (66%), Gaps = 6/100 (6%)
Query: 162 RKRKDQDG------EDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDK 215
+K+K DG ED + D G E+ + T K+PR+VWT +LH +F+ V LG+
Sbjct: 106 KKQKKSDGGEAAAVEDSTAEEGDSGPEDASGKTSKRPRLVWTPQLHKRFVDVVAHLGIKN 165
Query: 216 AVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLE 255
AVPK I+ LMNVEGLTRENVASHLQK+RL LKR+ T E
Sbjct: 166 AVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLTTE 205
>gi|255548045|ref|XP_002515079.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223545559|gb|EEF47063.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 697
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 88/146 (60%), Gaps = 9/146 (6%)
Query: 4 EEKGGSSSDEDGVIDKFPIGM--RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALK 61
E+K GSS E +KF M RVL V+ D + +I+ LR+C Y V + A +
Sbjct: 21 EKKEGSS--EVVRWEKFLPNMVLRVLLVEADYSTRQIISALLRKCSYRVAAVPDGLMAWE 78
Query: 62 MLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINH 117
L++ NN DL++++V +P + G+ LL LV +E D +PV+M+S++ V+K +
Sbjct: 79 TLKDGPNNIDLILTEVDLPLISGYALLTLV-MEHDFCKNIPVIMMSSHDSISKVLKCMLK 137
Query: 118 GACDYLLKPVRMEELKNTWQHVIRRK 143
GA D+L+KPVR ELKN WQHV RR+
Sbjct: 138 GAADFLIKPVRRNELKNLWQHVWRRQ 163
>gi|168065344|ref|XP_001784613.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
gi|162663845|gb|EDQ50588.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
Length = 425
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L V+ D ++ LR C YEVT A +L + +NFDLV++DV MP +
Sbjct: 12 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDVVMPRLS 71
Query: 84 GFKLL-ELVGLEM--DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL +++ E +P+V++S+Y +V + ++ GACDYL+KPVR EL+N WQHV
Sbjct: 72 GVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHVW 131
Query: 141 RR 142
R+
Sbjct: 132 RK 133
>gi|84570625|dbj|BAE72697.1| pseudo-response regulator 37 homologue [Lemna paucicostata]
Length = 617
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V++D + ++ LR C YEVT + A K+L NN D+V+++V MP +
Sbjct: 77 LKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKVLENLSNNVDIVLTEVVMPSLS 136
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL+ + + L PV+M+S++ +V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 137 GIGLLDKIMSHITLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 196
Query: 141 RR 142
RR
Sbjct: 197 RR 198
>gi|255928914|gb|ACU42264.1| pseudo response regulator 37 [Pisum sativum]
Length = 780
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL VDDD + ++ LR C YEVT + + A K L + N DLV+++V MP +
Sbjct: 74 IKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGNRIDLVLTEVAMPFVS 133
Query: 84 GF----KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
G K++ + L+ ++PV+M+S++ +V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 134 GIGLLCKIMSHIALK-NIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHV 192
Query: 140 IRR 142
RR
Sbjct: 193 WRR 195
>gi|356539090|ref|XP_003538033.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR3-like [Glycine max]
Length = 792
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V+DD + ++ LR C YEVT + + A K+L + N DLV+++V MP +
Sbjct: 90 IKVLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVLEDPENGIDLVLTEVAMPILS 149
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S++ +V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 150 GIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHVW 209
Query: 141 RR 142
RR
Sbjct: 210 RR 211
>gi|355469068|gb|ACU42263.2| pseudo response regulator 37 [Pisum sativum]
Length = 792
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL VDDD + ++ LR C YEVT + + A K L + N DLV+++V MP +
Sbjct: 86 IKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGNRIDLVLTEVAMPFVS 145
Query: 84 GF----KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
G K++ + L+ ++PV+M+S++ +V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 146 GIGLLCKIMSHIALK-NIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHV 204
Query: 140 IRR 142
RR
Sbjct: 205 WRR 207
>gi|224131058|ref|XP_002320991.1| response regulator [Populus trichocarpa]
gi|222861764|gb|EEE99306.1| response regulator [Populus trichocarpa]
Length = 144
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 75/106 (70%), Gaps = 6/106 (5%)
Query: 62 MLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACD 121
MLRE++N FD++ +D+ M +MDG +LL+++ EMDLPVV++S+ + +LV+KG+ GACD
Sbjct: 1 MLREDKNRFDVLGNDLQMHEMDGIQLLKIIRSEMDLPVVIISSDDEQELVLKGVLQGACD 60
Query: 122 YLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQ 167
L+KPV+ME LK WQHV+R+K N + E+ RK +D+
Sbjct: 61 CLIKPVKMEALKVFWQHVVRKK------INNTLERLEQPIRKEEDK 100
>gi|296089013|emb|CBI38716.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C Y+V + + A + L+ N DL++++V +P +
Sbjct: 3 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 62
Query: 84 GFKLLELVGLEMDL----PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
GF LL L+ +E D+ PV+M+S++ +V+K + GA D+L+KPVR EL+N WQHV
Sbjct: 63 GFALLSLI-MEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELRNLWQHV 121
Query: 140 IRR 142
RR
Sbjct: 122 WRR 124
>gi|157399682|gb|ABV53465.1| pseudo-response regulator 9 [Castanea sativa]
Length = 700
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 80/128 (62%), Gaps = 5/128 (3%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPD 81
+ +R+L V+ D + +I+ LR+C Y+V + + A + L+ +N DLV+++V +P
Sbjct: 37 VALRILLVEADDSTRQIIAALLRKCSYKVAAVSDGLKAWETLKGRPHNIDLVLTEVELPS 96
Query: 82 MDGFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+ GF LL L+ +E D +PV+M+S+ V+K + GA D+L+KPVR EL+N WQ
Sbjct: 97 ISGFALLTLI-MEHDVCKNIPVIMMSSNDAITTVLKCMLKGAADFLIKPVRKNELRNLWQ 155
Query: 138 HVIRRKKV 145
HV RR+ +
Sbjct: 156 HVWRRQTL 163
>gi|225453624|ref|XP_002266192.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 641
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C Y+V + + A + L+ N DL++++V +P +
Sbjct: 51 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 110
Query: 84 GFKLLELVGLEMDL----PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
GF LL L+ +E D+ PV+M+S++ +V+K + GA D+L+KPVR EL+N WQHV
Sbjct: 111 GFALLSLI-MEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELRNLWQHV 169
Query: 140 IRR 142
RR
Sbjct: 170 WRR 172
>gi|449456441|ref|XP_004145958.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C Y V + A ++L+E N DL++++V +P +
Sbjct: 61 LRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEILKERPRNVDLILAEVELPSIS 120
Query: 84 GFKLLELV-GLEM--DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
GF LL L+ G E ++PV+M+S+ V K + GA DYL+KP+R EL+N WQHV
Sbjct: 121 GFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLVKPLRRNELRNLWQHVW 180
Query: 141 RRK 143
RR+
Sbjct: 181 RRQ 183
>gi|449497396|ref|XP_004160390.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C Y V + A ++L+E N DL++++V +P +
Sbjct: 61 LRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEILKERPRNVDLILAEVELPSIS 120
Query: 84 GFKLLELV-GLEM--DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
GF LL L+ G E ++PV+M+S+ V K + GA DYL+KP+R EL+N WQHV
Sbjct: 121 GFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLVKPLRRNELRNLWQHVW 180
Query: 141 RRK 143
RR+
Sbjct: 181 RRQ 183
>gi|312283015|dbj|BAJ34373.1| unnamed protein product [Thellungiella halophila]
Length = 486
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C Y+V + + A + L+E ++ DL+++++ +P +
Sbjct: 41 LRVLLVESDDSTRQIITALLRKCYYKVVAVSDGLAAWETLKEKSHSIDLILTELDLPSIS 100
Query: 84 GFKLLELVGLE----MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
GF LL LV +E ++PV+M+S+ LV+K + GA DYL+KP+R ELKN WQHV
Sbjct: 101 GFALLALV-MENEACKNIPVIMMSSQDSITLVLKCMLRGAADYLIKPMRKNELKNLWQHV 159
Query: 140 IRR 142
RR
Sbjct: 160 WRR 162
>gi|297793511|ref|XP_002864640.1| hypothetical protein ARALYDRAFT_496092 [Arabidopsis lyrata subsp.
lyrata]
gi|297310475|gb|EFH40899.1| hypothetical protein ARALYDRAFT_496092 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 64/94 (68%)
Query: 162 RKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKI 221
+++K GE + D G E+ + T K+PR+VWT +LH +F+ V LG+ AVPK I
Sbjct: 102 KQKKSGGGEAAVAEEGDSGTEDASGRTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTI 161
Query: 222 LDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLE 255
+ LMNVEGLTRENVASHLQK+RL LKR+ T E
Sbjct: 162 MQLMNVEGLTRENVASHLQKYRLYLKRIQGLTTE 195
>gi|226497556|ref|NP_001141486.1| uncharacterized protein LOC100273598 [Zea mays]
gi|194704770|gb|ACF86469.1| unknown [Zea mays]
gi|414886440|tpg|DAA62454.1| TPA: hypothetical protein ZEAMMB73_402220 [Zea mays]
Length = 629
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 83/138 (60%), Gaps = 7/138 (5%)
Query: 10 SSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNN 69
SS E G++ + P+ RVL + D + ++ LR+C Y V + + A +L+E N
Sbjct: 31 SSMEMGMLPRMPV--RVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDLLKEKSFN 88
Query: 70 FDLVISDVYMPDMDGFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINHGACDYLLK 125
DLV+++V +P M GF LL + +E D +PV+M+S++ +V K + GA D+L+K
Sbjct: 89 VDLVLTEVELPLMSGFLLLSTI-MEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVK 147
Query: 126 PVRMEELKNTWQHVIRRK 143
P+R EL+N WQHV R++
Sbjct: 148 PIRKNELRNLWQHVWRKQ 165
>gi|356571269|ref|XP_003553801.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 695
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 5/139 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C Y+V + A + L+ + DL++++V +P +
Sbjct: 33 LRVLLVEADDSTRQIIAALLRKCGYKVVAFCDGLKAWETLKNKAFDLDLILTEVDLPSIS 92
Query: 84 GFKLLELVGLEMDL----PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
GF LL L+ +E D+ PV+M+S++ +V K + GA D+L+KPVR EL+N WQHV
Sbjct: 93 GFSLLTLI-MEHDICKNIPVIMMSSHDSVSMVFKCMLKGAADFLIKPVRKNELRNLWQHV 151
Query: 140 IRRKKVDPKDQNRSPHEFE 158
RR + QN + E E
Sbjct: 152 WRRHAISRPPQNLTLPEIE 170
>gi|325910796|dbj|BAJ83828.1| circadian response regulator 2a [Physcomitrella patens subsp.
patens]
Length = 915
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
Query: 30 DDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGFKLL- 88
+DD ++ LR C YEVT A +L E +NFDLV++DV MP + G +L
Sbjct: 189 EDDDATRHVVGALLRNCNYEVTSVANGSLAWGLLEEANSNFDLVLTDVVMPCLSGVGILS 248
Query: 89 ELVGLEM--DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
+++ E +P+V++S+Y +V + ++ GACDYL+KPVR ELKN WQHV R+
Sbjct: 249 KMLKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELKNLWQHVWRK 304
>gi|449448936|ref|XP_004142221.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 797
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 3/164 (1%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V++D + ++ L C YEV + A KML + N+ DLV+++V MP +
Sbjct: 89 LKVLLVENDDSTRHLVTALLCNCSYEVIAAANGLHAWKMLEDLTNHIDLVLTEVVMPCLS 148
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S++ LV K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 149 GIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 208
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENE 184
RR + S + +KS + + + ++ DD+ +NE
Sbjct: 209 RRCHSSSGSGSESGTQTQKSVKSKSVEKSDNNTGSNDDEEEDNE 252
>gi|356520225|ref|XP_003528764.1| PREDICTED: two-component response regulator-like PRR95-like isoform
1 [Glycine max]
Length = 703
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 78/132 (59%), Gaps = 5/132 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C Y V + A + L++ DL++++V +P +
Sbjct: 29 LRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKKAPELDLILTEVELPAIS 88
Query: 84 GFKLLELVGLEMDL----PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
GF LL L+ +E D+ PV+M+S++ + +K + GA D+L+KP+R EL+N WQHV
Sbjct: 89 GFALLSLI-MEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIRKNELRNLWQHV 147
Query: 140 IRRKKVDPKDQN 151
RR + QN
Sbjct: 148 WRRHAISTPTQN 159
>gi|308913674|gb|ADO51647.1| PRR59 [Zea mays]
Length = 695
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 92/173 (53%), Gaps = 6/173 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C Y V + A +++RE +FDLV+++V MP +
Sbjct: 53 LRVLLVEHDDSTRQIVTALLRKCGYRVAAVADGMKAWEVMRERAYDFDLVLTEVAMPSLS 112
Query: 84 GFKLLELVGLEMD---LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G +LL + + +PV+M+S+ V+K + GA D+L+KPVR EL N WQHV
Sbjct: 113 GIQLLSRIAAAAECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKNELGNLWQHVW 172
Query: 141 RRKKVDPK---DQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQK 190
RR ++ + +N + + + GE+ DE+ D N+ T K
Sbjct: 173 RRHAMNCQTNGSENNAASNHVSTNVANGSKTGENNDEESDAQSFGNKRETEIK 225
>gi|302757555|ref|XP_002962201.1| hypothetical protein SELMODRAFT_36646 [Selaginella moellendorffii]
gi|300170860|gb|EFJ37461.1| hypothetical protein SELMODRAFT_36646 [Selaginella moellendorffii]
Length = 187
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
Query: 169 GEDEDED---GDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLM 225
GE+E+ D G ++ E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM
Sbjct: 83 GEEEEADSGGGPENSGEEPAARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM 142
Query: 226 NVEGLTRENVASHLQKFRLSLKRL 249
NVEGLTRENVASHLQK+RL LKR+
Sbjct: 143 NVEGLTRENVASHLQKYRLYLKRM 166
>gi|225435163|ref|XP_002281776.1| PREDICTED: two-component response regulator-like PRR73-like [Vitis
vinifera]
Length = 785
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 103/194 (53%), Gaps = 19/194 (9%)
Query: 20 FPI-GMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
PI ++VL V++D + ++ LR C YEVT + A K+L + N+ D+V+++V
Sbjct: 90 LPIRSLKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDIVLTEVV 149
Query: 79 MPDMDGFKLLELVGLEM---DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
MP + G LL + ++PV+M+S++ +V K ++ GA D+L+KP+R ELKN
Sbjct: 150 MPFISGIGLLCKIMSHKTFKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNL 209
Query: 136 WQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDE----DE-----------DGDDDG 180
WQHV RR + S + +KS + + + + E+ DE DG D+G
Sbjct: 210 WQHVWRRCHSSSGSGSESGTQTKKSVKSKSNDESENNTGSSDERDNGSTGPSIRDGSDNG 269
Query: 181 HENENSTTQKKPRV 194
++S T++ V
Sbjct: 270 SGTQSSWTKRAAEV 283
>gi|255566892|ref|XP_002524429.1| conserved hypothetical protein [Ricinus communis]
gi|223536313|gb|EEF37964.1| conserved hypothetical protein [Ricinus communis]
Length = 667
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C Y+V + A +ML+ +N DL++++V +P +
Sbjct: 44 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEMLKGKPHNIDLILTEVELPSIS 103
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G+ LL L+ + ++PV+M+S+ V K + GA DYL+KP+R EL+N WQHV
Sbjct: 104 GYALLTLIMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPIRKNELRNLWQHVW 163
Query: 141 RRK 143
RR+
Sbjct: 164 RRQ 166
>gi|356520227|ref|XP_003528765.1| PREDICTED: two-component response regulator-like PRR95-like isoform
2 [Glycine max]
Length = 722
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 78/132 (59%), Gaps = 5/132 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C Y V + A + L++ DL++++V +P +
Sbjct: 29 LRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKKAPELDLILTEVELPAIS 88
Query: 84 GFKLLELVGLEMDL----PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
GF LL L+ +E D+ PV+M+S++ + +K + GA D+L+KP+R EL+N WQHV
Sbjct: 89 GFALLSLI-MEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIRKNELRNLWQHV 147
Query: 140 IRRKKVDPKDQN 151
RR + QN
Sbjct: 148 WRRHAISTPTQN 159
>gi|195604808|gb|ACG24234.1| two-component response regulator-like PRR73 [Zea mays]
Length = 765
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D + +++ LR+C YEV + A + L + +NN DLV+++V+M +
Sbjct: 82 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMTCLS 141
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + D+PV+M+S +V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 142 GIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 201
Query: 141 RR 142
RR
Sbjct: 202 RR 203
>gi|297810367|ref|XP_002873067.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
gi|297318904|gb|EFH49326.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
Length = 733
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 102/197 (51%), Gaps = 25/197 (12%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D I+ LR C YEV + I A K+L + N+ D+V+++V MP +
Sbjct: 85 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 144
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S++ LV K ++ GA D+L+KP+R ELK WQHV
Sbjct: 145 GISLLSKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 204
Query: 141 RR-KKVDPKDQNRSPHEFEKSYR----KRKDQD----GEDED-------EDGDDDGHENE 184
RR + H+ +KS + ++ D D GE+E+ DG DG +
Sbjct: 205 RRCQSSSGSGSESGTHQTQKSVKSKSIRKSDHDSRSSGENENGSIGLNASDGSSDGSGAQ 264
Query: 185 NSTTQK------KPRVV 195
+S T+K PR V
Sbjct: 265 SSWTKKAVEVDDSPRAV 281
>gi|168027167|ref|XP_001766102.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
gi|162682745|gb|EDQ69161.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
Length = 1143
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
Query: 30 DDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGFKLL- 88
+DD ++ LR C YEVT A +L E +NFDLV++DV MP + G +L
Sbjct: 189 EDDDATRHVVGALLRNCNYEVTSVANGSLAWGLLEEANSNFDLVLTDVVMPCLSGVGILS 248
Query: 89 ELVGLEM--DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
+++ E +P+V++S+Y +V + ++ GACDYL+KPVR ELKN WQHV R+
Sbjct: 249 KMLKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELKNLWQHVWRK 304
>gi|157399680|gb|ABV53464.1| pseudo-response regulator 5 [Castanea sativa]
Length = 698
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 81/138 (58%), Gaps = 8/138 (5%)
Query: 29 VDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGFKLL 88
++ D + +I+ LR+C Y VT + A ++LR +N DL++++V +P + GF LL
Sbjct: 67 IEADDSTRQIIGALLRKCSYRVTAVPDGLKAWEILRGRPHNIDLILTEVDLPAISGFALL 126
Query: 89 ELVG---LEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKV 145
L+ + ++PV+M+SA V K + GA DYL+KP+R ELKN WQHV R++
Sbjct: 127 TLIAEHEICKNIPVIMMSAQDSVSTVYKCMLRGAADYLVKPIRRNELKNLWQHVWRKQSS 186
Query: 146 -----DPKDQNRSPHEFE 158
DP+D++ + + E
Sbjct: 187 NLGINDPQDESVAQQQLE 204
>gi|255080498|ref|XP_002503829.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
gi|226519096|gb|ACO65087.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
Length = 1414
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
P + VL VDDD+ C ++ L++C Y+VT + A+ +L E F+L+++DV MP
Sbjct: 6 PADVHVLLVDDDRVCRTLVAGMLKKCNYQVTTASSGEEAMALL-ERGTQFNLLLTDVMMP 64
Query: 81 DMDGFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
D+DG LL V ++PVVM+S+ VM I GA DYLLKPV + +K+ W
Sbjct: 65 DVDGPTLLHYVRNNPFYQEMPVVMMSSNEHADTVMNCIRLGAEDYLLKPVTKKAVKHMWA 124
Query: 138 HVIRRKKVDPKDQNRSPHEFEKSYRKRKDQD----GEDEDEDGDDDGHEN 183
HV RRK+ + + +FE + +D G E EDG G E+
Sbjct: 125 HVWRRKQ-----RYQMVPQFENGHEVVEDDYAAGIGAHELEDGHHRGFED 169
>gi|356536913|ref|XP_003536977.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 747
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 92/162 (56%), Gaps = 3/162 (1%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V+ D + ++ LR C YEV + A K+L + N+ DLV+++V MP +
Sbjct: 79 LKVLLVEIDDSTRHVVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLVLTEVAMPGLS 138
Query: 84 GFKLL-ELVG--LEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL +++G ++PVVM+S++ LV K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 139 GIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 198
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHE 182
RR + S + +KS + + + ++ D+D +E
Sbjct: 199 RRCHSSSGSGSESGTQTQKSIKSKSLEKSDNNSGSNDEDDNE 240
>gi|255086767|ref|XP_002509350.1| g2-like myb-family transcription factor [Micromonas sp. RCC299]
gi|226524628|gb|ACO70608.1| g2-like myb-family transcription factor [Micromonas sp. RCC299]
Length = 306
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 51/60 (85%)
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
KKPR+VWT ELH +F+ AVN LG+ AVPK IL LMNVEG+TRENVASHLQK+RL LKRL
Sbjct: 58 KKPRLVWTPELHMRFMNAVNHLGIKNAVPKTILQLMNVEGMTRENVASHLQKYRLYLKRL 117
>gi|255582079|ref|XP_002531836.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223528532|gb|EEF30556.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 807
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 90/160 (56%), Gaps = 3/160 (1%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V++D + ++ LR C YEV A K+L + N+ DLV+++V MP +
Sbjct: 74 LKVLLVENDDSTRHVVSALLRNCSYEVNAVANGFQAWKILEDMNNHTDLVLTEVVMPILS 133
Query: 84 GFKLLELVGLE---MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S++ +V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 134 GIGLLCKIRNHKTLRNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 193
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDG 180
RR + S + +KS + + +++ E+ + D+ G
Sbjct: 194 RRCHSSSGSGSESGTQTKKSAKTKSNEESENNSDSSDELG 233
>gi|108707546|gb|ABF95341.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 745
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D + +++ LR+C YEV + A + L + +N+ DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + D+PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 141 RR 142
RR
Sbjct: 201 RR 202
>gi|355469070|gb|ACU42265.2| pseudo response regulator 59 [Pisum sativum]
Length = 494
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 77/124 (62%), Gaps = 5/124 (4%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D +I+ LR+C Y+V + A ++L+ NFDL++++V +P +
Sbjct: 45 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRNFDLILTEVDLPSVS 104
Query: 84 GFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
G+ LL L+ +E D +PV+M+S+ V K + GA DYL+KP+R+ EL+N WQHV
Sbjct: 105 GYALLSLI-MEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHV 163
Query: 140 IRRK 143
RR+
Sbjct: 164 WRRQ 167
>gi|28948379|pdb|1IRZ|A Chain A, Solution Structure Of Arr10-B Belonging To The Garp Family
Of Plant Myb-Related Dna Binding Motifs Of The
Arabidopsis Response Regulators
Length = 64
Score = 102 bits (253), Expect = 7e-19, Method: Composition-based stats.
Identities = 46/63 (73%), Positives = 57/63 (90%)
Query: 187 TTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSL 246
T QKKPRV+WT ELH KF+ AV+ LG+++AVPKKILDLMNV+ LTRENVASHLQKFR++L
Sbjct: 1 TAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRVAL 60
Query: 247 KRL 249
K++
Sbjct: 61 KKV 63
>gi|297746178|emb|CBI16234.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 103/194 (53%), Gaps = 19/194 (9%)
Query: 20 FPI-GMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
PI ++VL V++D + ++ LR C YEVT + A K+L + N+ D+V+++V
Sbjct: 90 LPIRSLKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDIVLTEVV 149
Query: 79 MPDMDGFKLLELVGLEM---DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
MP + G LL + ++PV+M+S++ +V K ++ GA D+L+KP+R ELKN
Sbjct: 150 MPFISGIGLLCKIMSHKTFKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNL 209
Query: 136 WQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGED----EDE-----------DGDDDG 180
WQHV RR + S + +KS + + + + E+ DE DG D+G
Sbjct: 210 WQHVWRRCHSSSGSGSESGTQTKKSVKSKSNDESENNTGSSDERDNGSTGPSIRDGSDNG 269
Query: 181 HENENSTTQKKPRV 194
++S T++ V
Sbjct: 270 SGTQSSWTKRAAEV 283
>gi|147776739|emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]
Length = 991
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C Y+V + + A + L+ N DL++++V +P +
Sbjct: 51 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 110
Query: 84 GFKLLELVGLEMDL----PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
GF LL L+ +E D+ PV+M+S++ +V+K + GA D+L+KPVR EL N WQHV
Sbjct: 111 GFALLSLI-MEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELXNLWQHV 169
Query: 140 IRR 142
RR
Sbjct: 170 WRR 172
>gi|115452319|ref|NP_001049760.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|122247198|sp|Q10N34.1|PRR73_ORYSJ RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
gi|51571879|dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa Japonica Group]
gi|108707543|gb|ABF95338.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
gi|113548231|dbj|BAF11674.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|222624693|gb|EEE58825.1| hypothetical protein OsJ_10396 [Oryza sativa Japonica Group]
Length = 767
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D + +++ LR+C YEV + A + L + +N+ DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + D+PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 141 RR 142
RR
Sbjct: 201 RR 202
>gi|158513189|sp|A2XFB7.2|PRR73_ORYSI RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
Length = 767
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D + +++ LR+C YEV + A + L + +N+ DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + D+PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 141 RR 142
RR
Sbjct: 201 RR 202
>gi|24796813|gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
Length = 789
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D + +++ LR+C YEV + A + L + +N+ DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + D+PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 141 RR 142
RR
Sbjct: 201 RR 202
>gi|51571885|dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa Indica Group]
Length = 767
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D + +++ LR+C YEV + A + L + +N+ DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + D+PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 141 RR 142
RR
Sbjct: 201 RR 202
>gi|308808948|ref|XP_003081784.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
gi|116060250|emb|CAL56309.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
Length = 878
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 89/160 (55%), Gaps = 15/160 (9%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+ VL VDD++ C + LR C Y VT+ AL++LR F ++++DV MP +D
Sbjct: 30 VHVLVVDDERICRTVTSSLLRRCGYRVTMAESGEEALELLRRG-TEFHMLLTDVMMPGID 88
Query: 84 GFKLLELVGLE---MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL++V + D+PVVM+SA + V + I HGA DYLLKPV +K+ W HV
Sbjct: 89 GPALLQIVRNDERLRDMPVVMMSANEHSDTVFRCIQHGAEDYLLKPVSRRAVKHMWTHVW 148
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDG 180
R+ +V + +R+ + +DGE+ ED +D G
Sbjct: 149 RKSQV---NVSRTVPQL--------GEDGEELLEDDEDRG 177
>gi|255928918|gb|ACU42266.1| pseudo response regulator 59 [Pisum sativum]
Length = 469
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 77/124 (62%), Gaps = 5/124 (4%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D +I+ LR+C Y+V + A ++L+ NFDL++++V +P +
Sbjct: 20 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRNFDLILTEVDLPSVS 79
Query: 84 GFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
G+ LL L+ +E D +PV+M+S+ V K + GA DYL+KP+R+ EL+N WQHV
Sbjct: 80 GYALLSLI-MEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHV 138
Query: 140 IRRK 143
RR+
Sbjct: 139 WRRQ 142
>gi|303284239|ref|XP_003061410.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
gi|226456740|gb|EEH54040.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
Length = 344
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 169 GEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVE 228
GE DG+ E + KK R+VWT ELH +F+ AVN LG+ AVPK IL LMNVE
Sbjct: 41 GEKRVSDGEK---EATSGRATKKRRLVWTPELHVRFMSAVNHLGITNAVPKTILQLMNVE 97
Query: 229 GLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSY 269
G+TRENVASHLQK+RL LKRL A + V + Y
Sbjct: 98 GMTRENVASHLQKYRLYLKRLAGVPPNAPLPPDVMRRAHPY 138
>gi|255568450|ref|XP_002525199.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223535496|gb|EEF37165.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 762
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 18/189 (9%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V++D + ++ LR C YEV + A ++L + N DLV+++V MP +
Sbjct: 88 LKVLLVENDYSTRHVVTALLRNCSYEVIEATNGLQAWRILEDLTNQIDLVLTEVVMPCLS 147
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S++ LV K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 148 GIGLLYKIMSHKTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 207
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKR------KDQDGEDEDE---------DGDDDGHENEN 185
RR + S E +KS + + D DED+ DG D+G ++
Sbjct: 208 RRCHSSSGSGSESGTETQKSVKSKSVEKSGNDTGSSDEDDNGSIGLNVGDGSDNGSGTQS 267
Query: 186 STTQKKPRV 194
S T++ V
Sbjct: 268 SWTKQAVEV 276
>gi|84570633|dbj|BAE72701.1| pseudo-response regulator 59 homologue [Lemna gibba]
Length = 496
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + I+ LR+C Y V I A +++E NFD+++S+V +P
Sbjct: 57 LRVLLVEPDDSTRHIVTALLRKCSYHVASVADGIKAWDIVKEKNFNFDIILSEVEVPSFS 116
Query: 84 GFKLL-ELVGLEMD--LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL +++G E+ +PV+M+S+ +V K + GA D+L+KPVR EL+N WQHV
Sbjct: 117 GISLLTKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVRKNELRNLWQHVW 176
Query: 141 RR 142
RR
Sbjct: 177 RR 178
>gi|357121369|ref|XP_003562393.1| PREDICTED: two-component response regulator-like PRR37-like
[Brachypodium distachyon]
Length = 660
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR C Y+V A L++ ++N DLV+S+V MP +
Sbjct: 21 IRVLLVETDDSTRQIVTALLRHCMYQVIPAENGDQAWARLQDMQDNIDLVLSEVVMPGLS 80
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LLE + + D+PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 81 GISLLEKIMAHNVCKDIPVIMMSSNDAMGTVFKCLSTGAVDFLVKPIRKNELKNLWQHVW 140
Query: 141 RR 142
RR
Sbjct: 141 RR 142
>gi|412992495|emb|CCO18475.1| predicted protein [Bathycoccus prasinos]
Length = 1199
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 78/123 (63%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+ VL VDD++ C + + LR+C Y VT A+++LR F+L+++DV MPD+D
Sbjct: 51 IHVLVVDDERICRAVTSQVLRKCGYRVTTCESGAEAIELLRRG-TEFNLLLTDVMMPDID 109
Query: 84 GFKLLELVGLEMD---LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G KLL+ V LPV+M+SA +++V + + GA DYLLKPV ++++K WQHV
Sbjct: 110 GPKLLQHVRHHSQFSQLPVIMMSANQHSEIVFECVRSGADDYLLKPVTVKQVKLLWQHVW 169
Query: 141 RRK 143
R++
Sbjct: 170 RKQ 172
>gi|312283377|dbj|BAJ34554.1| unnamed protein product [Thellungiella halophila]
Length = 728
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 25/197 (12%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D I+ LR C YEV + A K+L + N+ D+V+++V MP +
Sbjct: 84 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEVVMPYLS 143
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S++ LV K ++ GA D+L+KP+R ELK WQHV
Sbjct: 144 GISLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 203
Query: 141 RR-KKVDPKDQNRSPHEFEKSYR----KRKDQD----GEDED-------EDGDDDGHENE 184
RR + H+ +KS + ++ D D GE+E+ DG DG +
Sbjct: 204 RRCQSSSGSGSESGTHQTQKSVKSKSIRKSDNDSGSSGENENGSIGLNASDGSSDGSGTQ 263
Query: 185 NSTTQK------KPRVV 195
+S T+K PR V
Sbjct: 264 SSWTKKAVEVDDSPRTV 280
>gi|356504197|ref|XP_003520885.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 703
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 78/126 (61%), Gaps = 5/126 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ L +C Y+V + A + L+ ++ DL++++V +P +
Sbjct: 35 LRVLLVEADDSTRQIISALLHKCSYKVVAFCDGLKAWETLKNKPSDIDLILTEVDLPSIS 94
Query: 84 GFKLLELVGLEMDL----PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
GF LL L+ +E D+ PV+M+S++ +V+K + GA D+L+KPVR EL+N WQHV
Sbjct: 95 GFSLLTLI-MEHDICKNIPVIMMSSHDSVSMVLKCMLKGAADFLIKPVRRNELRNLWQHV 153
Query: 140 IRRKKV 145
RR V
Sbjct: 154 WRRHAV 159
>gi|356542579|ref|XP_003539744.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like PRR37-like [Glycine max]
Length = 777
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V+DD + ++ L+ C Y+VT + + A K+L + N DLV+++V MP +
Sbjct: 73 IKVLLVEDDDSTRHVVRALLQNCSYKVTAVSNGLQAWKVLEDPENGIDLVLTEVAMPILS 132
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S++ +V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 133 GIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHVW 192
Query: 141 RR 142
RR
Sbjct: 193 RR 194
>gi|224132554|ref|XP_002321349.1| pseudo response regulator [Populus trichocarpa]
gi|222868345|gb|EEF05476.1| pseudo response regulator [Populus trichocarpa]
Length = 687
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVT-NRAITALKMLRENRNNFDLVISDVYMPDM 82
+RVL V+ D + +I+ LR+C Y+ T + + A ++L+E +N DL++++V +P +
Sbjct: 65 LRVLLVEADDSTRQIIAALLRKCSYKAVATVSDGLKAWEILKERPHNIDLILTEVDLPSV 124
Query: 83 DGFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
G+ LL L+ + ++PV+M+S+ K V K + GA DYL+KP+R EL+N WQHV
Sbjct: 125 SGYALLTLIMEHEICKNIPVIMMSSQDSIKTVYKCMLRGAADYLVKPIRKNELRNLWQHV 184
Query: 140 IRRK 143
R++
Sbjct: 185 WRKQ 188
>gi|356545957|ref|XP_003541399.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 749
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 77/122 (63%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V+ D + ++ LR C YEV + A K+L + N+ DL++++V MP +
Sbjct: 81 LKVLLVEYDDSTRHVVTALLRNCSYEVIDAANGLQAWKILEDLTNHIDLILTEVAMPGLS 140
Query: 84 GFKLL-ELVGLEM--DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL +++G + ++PVVM+S++ LV K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 141 GIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 141 RR 142
RR
Sbjct: 201 RR 202
>gi|157399678|gb|ABV53463.1| pseudo-response regulator 7 [Castanea sativa]
Length = 784
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V++D + ++ LR C YEVT + A K+L + + DLV+++V MP +
Sbjct: 98 LKVLLVENDDSTRHVVSALLRNCGYEVTAAENGLQAWKILEDYTTHVDLVLTEVVMPCLS 157
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S+Y +V K ++ GA D+L KP+R ELKN WQHV
Sbjct: 158 GIGLLSKIMSHKTCKNIPVIMMSSYDSMNIVFKCLSKGAVDFLAKPIRKNELKNLWQHVW 217
Query: 141 RR 142
R+
Sbjct: 218 RK 219
>gi|108707544|gb|ABF95339.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 533
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D + +++ LR+C YEV + A + L + +N+ DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + D+PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 141 RR 142
RR
Sbjct: 201 RR 202
>gi|357157434|ref|XP_003577797.1| PREDICTED: two-component response regulator-like PRR95-like,
partial [Brachypodium distachyon]
Length = 681
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 94/182 (51%), Gaps = 10/182 (5%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR+C Y V + A +++R FDLV+++V MP +
Sbjct: 18 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVDMPTLS 77
Query: 84 GFKLLELVGLEMD---LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + +PV+M+S+ V++ + +GA D+L+KPVR EL+N WQHV
Sbjct: 78 GIDLLARIVAAHECKNIPVIMMSSQDSIGTVLRCMQNGAVDFLVKPVRKNELRNLWQHVW 137
Query: 141 RRKKVDPK-----DQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDG--HENENSTTQKKPR 193
RR ++ + + S H S + K D DE+ D G E E + +K P
Sbjct: 138 RRHSMNTQTNASENNAASNHISANSGNRSKTGDNSDEESDAQSSGSKRETEIQSVEKLPE 197
Query: 194 VV 195
V
Sbjct: 198 TV 199
>gi|224064372|ref|XP_002301443.1| pseudo response regulator [Populus trichocarpa]
gi|222843169|gb|EEE80716.1| pseudo response regulator [Populus trichocarpa]
Length = 694
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 92/160 (57%), Gaps = 18/160 (11%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C Y V+ + A + L+E ++ DL++++V +P +
Sbjct: 44 LRVLLVEADDSTRQIIVALLRKCGYRVSAVPDGLMAWETLKERPHSIDLILTEVELPLIS 103
Query: 84 GFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
G+ L LV +E D +PV+M+S++ +V+K + G+ D+L+KPVR EL+N WQHV
Sbjct: 104 GYAFLALV-MEHDVCKNIPVIMMSSHDSISVVLKCMLKGSADFLVKPVRKNELRNLWQHV 162
Query: 140 IRRKKVD----PKDQNR---------SPHEFEKSYRKRKD 166
RR+ P++ NR + +F S +K KD
Sbjct: 163 WRRQTQTAGKIPRNSNRVEASSENNAASSDFATSLQKNKD 202
>gi|84570635|dbj|BAE72702.1| pseudo-response regulator 95 homologue [Lemna gibba]
Length = 460
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 82/124 (66%), Gaps = 5/124 (4%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + KI+ LR+C Y+V+ + + A K L+E N+ DLV+++V +P++
Sbjct: 31 LRVLLVEADDSTRKIVAALLRKCGYKVSSASDGLEAWKTLKEKPNDTDLVLTEVELPNVS 90
Query: 84 GFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
G+ LL ++ +E + +PV+M+S+ K+V + + GA D+L+KP+R EL+N WQHV
Sbjct: 91 GYALLSMM-MEHETCKSIPVIMMSSNDSMKMVFECMLKGAADFLVKPIRKNELRNLWQHV 149
Query: 140 IRRK 143
RR+
Sbjct: 150 WRRQ 153
>gi|84570627|dbj|BAE72698.1| pseudo-response regulator 59 homologue [Lemna paucicostata]
Length = 501
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D I+ LR+C Y V I A ++ E NFD+++S+V +P
Sbjct: 73 LRVLLVEPDDCTRHIVTALLRKCSYHVAAVADGIKAWDIVEEKNFNFDIILSEVEVPSFS 132
Query: 84 GFKLL-ELVGLEMD--LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL +++G E+ +PV+M+S+ +V K + GA D+L+KPVR EL+N WQHV
Sbjct: 133 GINLLSKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVRKNELRNLWQHVW 192
Query: 141 RR 142
RR
Sbjct: 193 RR 194
>gi|281308390|gb|ADA58343.1| pseudo-response regulator 9 [Brassica rapa]
Length = 412
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 79/126 (62%), Gaps = 5/126 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V+ D + +I+ L++C Y+V + + A + L+E N DL+++++ +P +
Sbjct: 26 LKVLLVESDDSTRQIITALLQKCSYKVVAVSDGLAAWETLKEKSNEIDLILTELDLPAIS 85
Query: 84 GFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
GF LL LV +E + +PV+M+S+ +V+K + GA DYL+KP+R ELKN WQHV
Sbjct: 86 GFALLALV-MEHEACKNIPVIMMSSEDSMTMVLKCMLKGAADYLIKPMRKNELKNLWQHV 144
Query: 140 IRRKKV 145
RR V
Sbjct: 145 WRRLAV 150
>gi|52783225|sp|Q6LA42.2|APRR5_ARATH RecName: Full=Two-component response regulator-like APRR5; AltName:
Full=Pseudo-response regulator 5
gi|9758535|dbj|BAB08930.1| unnamed protein product [Arabidopsis thaliana]
gi|17063183|gb|AAL32986.1| pseudo-response regulator 5 protein [Arabidopsis thaliana]
gi|23506027|gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana]
Length = 558
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 82/138 (59%), Gaps = 9/138 (6%)
Query: 14 DGVI--DKF--PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNN 69
DG++ ++F I +RVL V+ D + +I+ LR+C Y V + A +ML+ +
Sbjct: 36 DGLVKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPES 95
Query: 70 FDLVISDVYMPDMDGFKLLELVGLEMDL----PVVMLSAYSDTKLVMKGINHGACDYLLK 125
DL++++V +P + G+ LL L+ +E D+ PV+M+S V K + GA DYL+K
Sbjct: 96 VDLILTEVDLPSISGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVK 154
Query: 126 PVRMEELKNTWQHVIRRK 143
P+R EL+N WQHV RR+
Sbjct: 155 PLRRNELRNLWQHVWRRQ 172
>gi|357464211|ref|XP_003602387.1| Two-component response regulator-like PRR73 [Medicago truncatula]
gi|355491435|gb|AES72638.1| Two-component response regulator-like PRR73 [Medicago truncatula]
Length = 685
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 86/149 (57%), Gaps = 13/149 (8%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D +I+ LR+C Y+V + A ++L+ + DL++++V +P +
Sbjct: 56 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRSIDLILTEVDLPAIS 115
Query: 84 GFKLLELVGLEMDL----PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
G+ LL L+ +E D+ PV+M+S+ V K + GA DYL+KP+R+ EL+N WQHV
Sbjct: 116 GYALLTLI-MEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHV 174
Query: 140 IRRKKVD--------PKDQNRSPHEFEKS 160
RR+ P+D++ + +FE +
Sbjct: 175 WRRQTQSAATAGINGPQDESDTQQKFEAT 203
>gi|356509155|ref|XP_003523317.1| PREDICTED: two-component response regulator-like APRR9-like
[Glycine max]
Length = 655
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 89/150 (59%), Gaps = 10/150 (6%)
Query: 4 EEKGGSSSDE---DGVI--DKF--PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRA 56
E+ GGS S G++ +KF + +RVL V+ D + +I+ LR+C Y+V
Sbjct: 22 EDSGGSGSKAGEFKGLMRWEKFLPKMVLRVLLVEADDSTRQIIAALLRKCSYKVVAVPDG 81
Query: 57 ITALKMLRENRNNFDLVISDVYMPDMDGFKLLELV---GLEMDLPVVMLSAYSDTKLVMK 113
+ A ++L+ +N DL++++V +P + G+ LL L+ + ++PV+M+S+ V K
Sbjct: 82 LKAWELLKGRPHNVDLILTEVDLPSISGYALLTLIMEHEICKNIPVIMMSSQDSISTVYK 141
Query: 114 GINHGACDYLLKPVRMEELKNTWQHVIRRK 143
+ GA DYL+KP+R EL+N WQHV RR+
Sbjct: 142 CMLRGAADYLVKPIRKNELRNLWQHVWRRQ 171
>gi|319657108|gb|ADV58932.1| pseudo-response regulator 7-like protein [Beta vulgaris subsp.
vulgaris]
Length = 718
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D + ++ LR C YEV + + A K+L + N DLV+++V MP +
Sbjct: 84 VRVLLVENDDSTRHVVAALLRNCCYEVVEASNGLQAWKILEDIENRIDLVLTEVVMPCVS 143
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PVVM+S++ LV K ++ GA D+L+KP+R ELKN WQH+
Sbjct: 144 GIALLFKIMSHKSRKNVPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHLW 203
Query: 141 RR 142
RR
Sbjct: 204 RR 205
>gi|108707545|gb|ABF95340.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 473
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D + +++ LR+C YEV + A + L + +N+ DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + D+PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 141 RR 142
RR
Sbjct: 201 RR 202
>gi|356518667|ref|XP_003528000.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 700
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C Y+V + A ++L+ +N DL++++V +P +
Sbjct: 50 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWELLKGRPHNVDLILTEVDLPSVS 109
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G+ LL L+ + ++PV+M+S+ V K + GA DYL+KP+R EL+N WQHV
Sbjct: 110 GYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRNLWQHVW 169
Query: 141 RRK 143
RR+
Sbjct: 170 RRQ 172
>gi|255079068|ref|XP_002503114.1| predicted protein [Micromonas sp. RCC299]
gi|226518380|gb|ACO64372.1| predicted protein [Micromonas sp. RCC299]
Length = 585
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 57/71 (80%)
Query: 179 DGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASH 238
+G E++++ K+PR+VWT LH +F+ AV+ LG+ AVPK I+ LMNVEGLTRENVASH
Sbjct: 231 EGSEDDHAHALKRPRLVWTPPLHKRFVDAVSHLGIKNAVPKTIMQLMNVEGLTRENVASH 290
Query: 239 LQKFRLSLKRL 249
LQK+RL LKRL
Sbjct: 291 LQKYRLYLKRL 301
>gi|357112782|ref|XP_003558186.1| PREDICTED: two-component response regulator-like PRR73-like
[Brachypodium distachyon]
Length = 766
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D +++ LR+C YEV + A + L + +N DLV+++V MP +
Sbjct: 82 LRVLLVENDDCTRQVVGALLRKCGYEVISAENGLHAWQYLEDLQNRIDLVLTEVAMPCLS 141
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + D+PV+M+S V K ++ GA D+L+KP+R ELKN WQH+
Sbjct: 142 GISLLSKIMSHKICKDIPVIMMSKNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHIW 201
Query: 141 RR 142
RR
Sbjct: 202 RR 203
>gi|77548762|gb|ABA91559.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 699
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 10/182 (5%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR+C Y V + A ++RE FDLV+++V MP +
Sbjct: 44 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWGVMRERAYAFDLVLTEVTMPTLS 103
Query: 84 GFKLLELVGLE---MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G +LL + ++PV+M+S+ V++ + GA D+L+KPVR EL+N WQHV
Sbjct: 104 GIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCMQKGAVDFLVKPVRKNELRNLWQHVW 163
Query: 141 RRKKVDPK---DQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDG----HENENSTTQKKPR 193
RR ++ + +N + + + GE DE+ D E E + +K P
Sbjct: 164 RRHAMNSQTNASENNAASNHLSANGGNGSKTGEHSDEESDAQSSGSKREVEIQSAEKLPE 223
Query: 194 VV 195
VV
Sbjct: 224 VV 225
>gi|224098134|ref|XP_002311124.1| predicted protein [Populus trichocarpa]
gi|222850944|gb|EEE88491.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 90/160 (56%), Gaps = 3/160 (1%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V++D + ++ LR C YEVT + + A K+L++ N+ DLV+++V MP +
Sbjct: 37 LKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTNHIDLVLTEVAMPCLS 96
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S++ +V K ++ GA D+L+KP+R ELK WQHV
Sbjct: 97 GIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNELKILWQHVW 156
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDG 180
R+ + S +KS + + +++ DDDG
Sbjct: 157 RKCHSASGSGSESAVRTQKSTKSNGADESDNDTGSNDDDG 196
>gi|225439773|ref|XP_002275837.1| PREDICTED: two-component response regulator-like APRR7 [Vitis
vinifera]
gi|297741496|emb|CBI32628.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 91/150 (60%), Gaps = 7/150 (4%)
Query: 2 TAEEKGGSSSDEDGVIDKFP----IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAI 57
+A+ +G SD++ +D + + RVL V++D + ++ LR C Y+VT T+ +
Sbjct: 32 SADGEGDDVSDDEESMDCYEALVLMKSRVLLVENDDSTRYVIGALLRNCGYQVTETSNGL 91
Query: 58 TALKMLRENRNNFDLVISDVYMPDMDGFKLLELV---GLEMDLPVVMLSAYSDTKLVMKG 114
A ++L++ N+ DLV+++V +P + G LL + ++PV+M+S + LV+K
Sbjct: 92 QAWRILKDTSNHIDLVLTEVNLPRLSGIALLCKIMNHKTRKNIPVIMMSTHDSGALVLKC 151
Query: 115 INHGACDYLLKPVRMEELKNTWQHVIRRKK 144
++ GA D+L+KPVR ELK WQH+ RR++
Sbjct: 152 LSKGATDFLVKPVRKNELKFLWQHIWRRRQ 181
>gi|218202508|gb|EEC84935.1| hypothetical protein OsI_32150 [Oryza sativa Indica Group]
Length = 623
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 7/141 (4%)
Query: 7 GGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLREN 66
SS E ++ + P+ RVL + D + I+ LR+C Y V + + A +L+E
Sbjct: 28 AAGSSRETRMLPRMPV--RVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEK 85
Query: 67 RNNFDLVISDVYMPDMDGFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINHGACDY 122
N DLV+++V +P M GF LL + +E D +PV+M+S+ +V K + GA D+
Sbjct: 86 SFNIDLVLTEVELPLMSGFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADF 144
Query: 123 LLKPVRMEELKNTWQHVIRRK 143
L+KP+R EL+N WQHV R++
Sbjct: 145 LVKPIRKNELRNLWQHVWRKQ 165
>gi|18420797|ref|NP_568446.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
gi|10281006|dbj|BAB13743.1| pseudo-response regulator 5 [Arabidopsis thaliana]
gi|332005931|gb|AED93314.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
Length = 667
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPD 81
I +RVL V+ D + +I+ LR+C Y V + A +ML+ + DL++++V +P
Sbjct: 157 IALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPS 216
Query: 82 MDGFKLLELVGLEMDL----PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+ G+ LL L+ +E D+ PV+M+S V K + GA DYL+KP+R EL+N WQ
Sbjct: 217 ISGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQ 275
Query: 138 HVIRRK 143
HV RR+
Sbjct: 276 HVWRRQ 281
>gi|281308396|gb|ADA58346.1| pseudo-response regulator 7b [Brassica rapa]
Length = 704
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 98/186 (52%), Gaps = 19/186 (10%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D I+ LR C YEV + A K+L + N+ D+V+++V MP +
Sbjct: 74 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEVVMPYLS 133
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S++ LV K ++ GA D+L+KP+R ELK WQHV
Sbjct: 134 GIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 193
Query: 141 RR-KKVDPKDQNRSPHEFEKSYRK----RKDQD----GEDEDE-------DGDDDGHENE 184
RR + H+ +KS + + D D GE+E+E DG DG +
Sbjct: 194 RRCQSSSGSGSESGTHQTQKSVKSKTIMKSDNDSGRSGENENESNGLNASDGSSDGSGAQ 253
Query: 185 NSTTQK 190
+S T+K
Sbjct: 254 SSWTKK 259
>gi|115480333|ref|NP_001063760.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|68565887|sp|Q689G6.1|PRR95_ORYSJ RecName: Full=Two-component response regulator-like PRR95; AltName:
Full=Pseudo-response regulator 95; Short=OsPRR95
gi|51571881|dbj|BAD38857.1| pseudo-response regulator 95 [Oryza sativa Japonica Group]
gi|52075943|dbj|BAD46023.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|52077226|dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|113631993|dbj|BAF25674.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|215695172|dbj|BAG90363.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695375|dbj|BAG90566.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641971|gb|EEE70103.1| hypothetical protein OsJ_30112 [Oryza sativa Japonica Group]
Length = 623
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 7/141 (4%)
Query: 7 GGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLREN 66
SS E ++ + P+ RVL + D + I+ LR+C Y V + + A +L+E
Sbjct: 28 AAGSSRETRMLPRMPV--RVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEK 85
Query: 67 RNNFDLVISDVYMPDMDGFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINHGACDY 122
N DLV+++V +P M GF LL + +E D +PV+M+S+ +V K + GA D+
Sbjct: 86 SFNIDLVLTEVELPLMSGFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADF 144
Query: 123 LLKPVRMEELKNTWQHVIRRK 143
L+KP+R EL+N WQHV R++
Sbjct: 145 LVKPIRKNELRNLWQHVWRKQ 165
>gi|302782157|ref|XP_002972852.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
gi|300159453|gb|EFJ26073.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
Length = 639
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V+DD + ++ LR C Y+V + A +L + DLV++DV MP +
Sbjct: 42 LKVLLVEDDDSTRHVVAALLRNCGYQVVPAANGLQAWSLLDDRNREIDLVLTDVVMPGLS 101
Query: 84 GFKLLELVGLEMD---LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + +PVVM+S++ T +V K + GA D+L+KPVR ELKN WQH
Sbjct: 102 GLGLLSKIMHHKNHQKVPVVMMSSHDSTNVVFKCLTKGAADFLVKPVRKNELKNLWQHAW 161
Query: 141 RRKK 144
R+ +
Sbjct: 162 RKAR 165
>gi|224128053|ref|XP_002320232.1| pseudo response regulator [Populus trichocarpa]
gi|222861005|gb|EEE98547.1| pseudo response regulator [Populus trichocarpa]
Length = 717
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+ VL V+ D + +I+ LR+C Y V + A + L+ +N DL++++V +P +
Sbjct: 44 LSVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGGPHNIDLILTEVELPLIS 103
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G+ LL LV + ++PV+M+S+ +V+K + GA D+L+KPVR EL+N WQHV
Sbjct: 104 GYALLTLVTEHAVCKNIPVIMMSSQDSISMVLKCMLKGAADFLIKPVRKNELRNLWQHVW 163
Query: 141 RRKKVDPKDQNRSPHEFEKS 160
RR+ + ++ H+ E S
Sbjct: 164 RRQTLSAGQIPQNLHKVEAS 183
>gi|297815826|ref|XP_002875796.1| hypothetical protein ARALYDRAFT_485038 [Arabidopsis lyrata subsp.
lyrata]
gi|297321634|gb|EFH52055.1| hypothetical protein ARALYDRAFT_485038 [Arabidopsis lyrata subsp.
lyrata]
Length = 325
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 174 EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
E+GD G E+ + T K+PR+VWT +LH +F+ V LG+ AVPK I+ LMNVEGLTRE
Sbjct: 129 EEGDS-GTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRE 187
Query: 234 NVASHLQKFRLSLKRLGNKTLEA 256
NVASHLQK+RL LKR+ T E
Sbjct: 188 NVASHLQKYRLYLKRMQGLTNEG 210
>gi|71067056|dbj|BAE16280.1| NbPCL1 [Nicotiana benthamiana]
Length = 312
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 57/74 (77%)
Query: 176 GDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENV 235
GDD +++ + T K+PR+VWT +LH +F+ V LG+ AVPK I+ LMNVEGLTRENV
Sbjct: 122 GDDSNNKSASKTLNKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENV 181
Query: 236 ASHLQKFRLSLKRL 249
ASHLQK+RL LKR+
Sbjct: 182 ASHLQKYRLYLKRM 195
>gi|15232597|ref|NP_190248.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|79314533|ref|NP_001030823.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|6523067|emb|CAB62334.1| putative protein [Arabidopsis thaliana]
gi|30102630|gb|AAP21233.1| At3g46640 [Arabidopsis thaliana]
gi|71067050|dbj|BAE16277.1| PHYTOCLOCK 1 [Arabidopsis thaliana]
gi|110743672|dbj|BAE99673.1| hypothetical protein [Arabidopsis thaliana]
gi|332644665|gb|AEE78186.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|332644666|gb|AEE78187.1| protein phytoclock 1 [Arabidopsis thaliana]
Length = 323
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 174 EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
E+GD G E+ + T K+PR+VWT +LH +F+ V LG+ AVPK I+ LMNVEGLTRE
Sbjct: 128 EEGDS-GTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRE 186
Query: 234 NVASHLQKFRLSLKRLGNKTLEA 256
NVASHLQK+RL LKR+ T E
Sbjct: 187 NVASHLQKYRLYLKRMQGLTNEG 209
>gi|224098126|ref|XP_002311123.1| pseudo response regulator [Populus trichocarpa]
gi|222850943|gb|EEE88490.1| pseudo response regulator [Populus trichocarpa]
Length = 766
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 90/160 (56%), Gaps = 3/160 (1%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V++D + ++ LR C YEVT + + A K+L++ N+ DLV+++V MP +
Sbjct: 92 LKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTNHIDLVLTEVAMPCLS 151
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S++ +V K ++ GA D+L+KP+R ELK WQHV
Sbjct: 152 GIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNELKILWQHVW 211
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDG 180
R+ + S +KS + + +++ DDDG
Sbjct: 212 RKCHSASGSGSESAVRTQKSTKSNGADESDNDTGSNDDDG 251
>gi|297746038|emb|CBI16094.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 4/92 (4%)
Query: 158 EKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAV 217
E+ R+ + D E+ +DD ++ T K+PR+VWT +LH +F+ V LG+ AV
Sbjct: 202 EERNREPAEADSAMRTENSNDD----PSARTLKRPRLVWTPQLHKRFVDVVGHLGIKNAV 257
Query: 218 PKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
PK I+ LMNVEGLTRENVASHLQK+RL LKR+
Sbjct: 258 PKTIMQLMNVEGLTRENVASHLQKYRLYLKRM 289
>gi|356538978|ref|XP_003537977.1| PREDICTED: putative two-component response regulator ARR21-like
[Glycine max]
Length = 323
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 160 SYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPK 219
S ++RK G E+ D + T K+PR+VWT +LH +F+ V LG+ AVPK
Sbjct: 113 SRKQRKIDCGAAEEADSAVQTETSAERTAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPK 172
Query: 220 KILDLMNVEGLTRENVASHLQKFRLSLKRL 249
I+ LMNVEGLTRENVASHLQK+RL LKR+
Sbjct: 173 TIMQLMNVEGLTRENVASHLQKYRLYLKRM 202
>gi|384246881|gb|EIE20369.1| CheY-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 129
Score = 98.6 bits (244), Expect = 7e-18, Method: Composition-based stats.
Identities = 54/128 (42%), Positives = 82/128 (64%), Gaps = 4/128 (3%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR-ENRNNFDLVISDVYM 79
P + +L VDD++ ++ LR+C Y+VT + AL++LR + F L+++DV M
Sbjct: 2 PNDVHILLVDDERLSRVVVGNLLRKCSYKVTEAGSGMEALEILRGQPPGTFSLILTDVMM 61
Query: 80 PDMDGFKLLELV-GLEM--DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTW 136
PD+DG +LL V G E +LPV+M+SA T+ V + I GA DYLLKPV +E+++ W
Sbjct: 62 PDVDGIELLRHVRGDEAWSNLPVIMMSANERTETVFECIRGGAEDYLLKPVTKKEVQHMW 121
Query: 137 QHVIRRKK 144
QHV RR++
Sbjct: 122 QHVWRRQQ 129
>gi|116787129|gb|ABK24384.1| unknown [Picea sitchensis]
Length = 274
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 61/87 (70%)
Query: 163 KRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKIL 222
KR + + E+ G + E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+
Sbjct: 71 KRIELEEEESSVGGVTENVGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIM 130
Query: 223 DLMNVEGLTRENVASHLQKFRLSLKRL 249
LMNVEGLTRENVASHLQK+RL LKR+
Sbjct: 131 QLMNVEGLTRENVASHLQKYRLYLKRM 157
>gi|18414032|ref|NP_568107.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
gi|52783235|sp|Q93WK5.1|APRR7_ARATH RecName: Full=Two-component response regulator-like APRR7; AltName:
Full=Pseudo-response regulator 7
gi|10281004|dbj|BAB13742.1| pseudo-response regulator 7 [Arabidopsis thaliana]
gi|14532638|gb|AAK64047.1| unknown protein [Arabidopsis thaliana]
gi|23296600|gb|AAN13129.1| unknown protein [Arabidopsis thaliana]
gi|332003137|gb|AED90520.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
Length = 727
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D I+ LR C YEV + I A K+L + N+ D+V+++V MP +
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 137
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S++ LV K ++ GA D+L+KP+R ELK WQHV
Sbjct: 138 GIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 197
Query: 141 RR 142
RR
Sbjct: 198 RR 199
>gi|334185766|ref|NP_001190022.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|332644667|gb|AEE78188.1| protein phytoclock 1 [Arabidopsis thaliana]
Length = 324
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 174 EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
E+GD G E+ + T K+PR+VWT +LH +F+ V LG+ AVPK I+ LMNVEGLTRE
Sbjct: 128 EEGDS-GTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRE 186
Query: 234 NVASHLQKFRLSLKRLGNKTLEA 256
NVASHLQK+RL LKR+ T E
Sbjct: 187 NVASHLQKYRLYLKRMQGLTNEG 209
>gi|302796211|ref|XP_002979868.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
gi|300152628|gb|EFJ19270.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
Length = 865
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 73/122 (59%), Gaps = 5/122 (4%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V+DD + ++ LR C YEVT + A ++L ++ DLV++D+ MP +
Sbjct: 109 LKVLLVEDDDSTRHVVAALLRNCGYEVTPAASGLQAWEILETRSSSVDLVLTDLMMPRLS 168
Query: 84 GFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
G +LL + + D +PVVM+S +V+K ++ GA D+L+KPVR ELKN WQH
Sbjct: 169 GIELLGKI-MSRDSPKRIPVVMMSCLDSMDVVLKCLSKGAVDFLVKPVRKNELKNLWQHF 227
Query: 140 IR 141
R
Sbjct: 228 WR 229
>gi|222637749|gb|EEE67881.1| hypothetical protein OsJ_25707 [Oryza sativa Japonica Group]
Length = 661
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL VD D + +++ LR C YEV A L + +N+ DLV+++V MP +
Sbjct: 61 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 120
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + ++PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 121 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 180
Query: 141 RR 142
RR
Sbjct: 181 RR 182
>gi|226499102|ref|NP_001151536.1| two-component response regulator-like PRR95 [Zea mays]
gi|195647486|gb|ACG43211.1| two-component response regulator-like PRR95 [Zea mays]
Length = 630
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 80/135 (59%), Gaps = 7/135 (5%)
Query: 13 EDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDL 72
E ++ + P+ RVL + D + ++ LR+C Y V + + A +L+E N DL
Sbjct: 35 ETPMLPRMPV--RVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDILKEKSFNIDL 92
Query: 73 VISDVYMPDMDGFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINHGACDYLLKPVR 128
V+++V +P M GF LL + +E D +PV+M+S++ +V K + GA D+L+KP+R
Sbjct: 93 VLTEVELPLMSGFLLLSTI-MEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPLR 151
Query: 129 MEELKNTWQHVIRRK 143
EL+N WQHV R++
Sbjct: 152 KNELRNLWQHVWRKQ 166
>gi|334715199|gb|AEG90655.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 5/164 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+ VL V+ D +++ LR C Y+V A L + +NN D+V+ +V+MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + ++PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 199
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENE 184
RR + S + +K + + + E + G +D H+NE
Sbjct: 200 RRCHSSSGSGSESGIQTQKCGKSKGGK--ESGNNSGSNDSHDNE 241
>gi|334715203|gb|AEG90657.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 5/164 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+ VL V+ D +++ LR C Y+V A L + +NN D+V+ +V+MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + ++PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 199
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENE 184
RR + S + +K + + + E + G +D H+NE
Sbjct: 200 RRCHSSSGSGSESGIQTQKCGKSKGGK--ESGNNSGSNDSHDNE 241
>gi|334715201|gb|AEG90656.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 5/164 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+ VL V+ D +++ LR C Y+V A L + +NN D+V+ +V+MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + ++PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 199
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENE 184
RR + S + +K + + + E + G +D H+NE
Sbjct: 200 RRCHSSSGSGSESGIQTQKCGKSKGGK--ESGNNSGSNDSHDNE 241
>gi|224106431|ref|XP_002314163.1| predicted protein [Populus trichocarpa]
gi|222850571|gb|EEE88118.1| predicted protein [Populus trichocarpa]
Length = 210
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 55/73 (75%)
Query: 177 DDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVA 236
D DG +E T K+PR+VWT +LH +F+ V LG+ AVPK I+ LMNVEGLTRENVA
Sbjct: 117 DRDGSGSEARKTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMNVEGLTRENVA 176
Query: 237 SHLQKFRLSLKRL 249
SHLQK+RL LKR+
Sbjct: 177 SHLQKYRLYLKRM 189
>gi|281308388|gb|ADA58342.1| pseudo-response regulator 7a [Brassica rapa]
Length = 725
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 25/197 (12%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D I+ LR C YEV + A K+L + N+ D+V+++V MP +
Sbjct: 95 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEVVMPYLS 154
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S++ L+ K ++ GA D+L+KP+R ELK WQHV
Sbjct: 155 GVGLLCKILNHKSRRNIPVIMMSSHDSMGLIFKCLSKGAVDFLVKPIRKNELKILWQHVW 214
Query: 141 RR-KKVDPKDQNRSPHEFEKSYRKRK----DQD----GEDED-------EDGDDDGHENE 184
RR + H+ +KS + + D D GE+E+ DG DG +
Sbjct: 215 RRCQSSSGSGSESGTHQTQKSVKSKNIIKSDNDSGHSGENENGSIGLNASDGSSDGSGAQ 274
Query: 185 NSTTQK------KPRVV 195
+S T+K PR V
Sbjct: 275 SSWTKKAVEVDDSPRAV 291
>gi|242067499|ref|XP_002449026.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
gi|241934869|gb|EES08014.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
Length = 697
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR+C Y V + A +++R FDLV+++V MP +
Sbjct: 55 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVAMPSLS 114
Query: 84 GFKLL-ELVGLE--MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G +LL +V + ++PV+M+S+ V+K + GA D+L+KPVR EL+N WQHV
Sbjct: 115 GIQLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKNELRNLWQHVW 174
Query: 141 RR 142
RR
Sbjct: 175 RR 176
>gi|51571883|dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa Indica Group]
Length = 704
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL VD D + +++ LR C YEV A L + +N+ DLV+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + ++PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 141 RR 142
RR
Sbjct: 182 RR 183
>gi|326518812|dbj|BAJ92567.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 687
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 95/182 (52%), Gaps = 10/182 (5%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR+C Y V + A +++R FDLV+++V MP +
Sbjct: 38 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVNMPTLS 97
Query: 84 GFKLL-ELVGLE--MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL +V + ++PV+M+S+ V+K + +GA D+L+KPVR EL+N WQHV
Sbjct: 98 GIDLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQNGAVDFLVKPVRKNELRNLWQHVW 157
Query: 141 RRKKVDPK-----DQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDG--HENENSTTQKKPR 193
RR ++ + + S H S K + DE+ D G E E + +K P
Sbjct: 158 RRHSMNSQLNASENNAASNHISVNSGTGSKTGENSDEESDAQSSGSKRETEIQSVEKLPE 217
Query: 194 VV 195
V
Sbjct: 218 TV 219
>gi|326491043|dbj|BAK05621.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 250
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 12 DEDGVIDKFPI---GMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRN 68
D+D ID+ + G++VLAVDDD L+ L + LR C YEVT ALK L +N +
Sbjct: 6 DQDMAIDEMMVETEGLKVLAVDDDPVYLRTLTQTLRRCGYEVTAKPSPAEALKELEKNPD 65
Query: 69 NFDLVISDVYM--PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKP 126
FD V++ MDGF LL +G + V++ S + +G GAC KP
Sbjct: 66 GFDFVMTAALTRGRGMDGFDLLNRIGERYPV-VILFSGEESMETRRRGTQGGACYLAEKP 124
Query: 127 VRMEELKNTWQHVIRRKK----------VDPKDQNRSPHEFEKSYRKR-KDQDGEDEDED 175
+R ++ WQHV+R ++ +P+ + H E + RKR + + + +
Sbjct: 125 MRDTQIYMIWQHVLRWRRENAAGVVAANANPRPSSEGGH-LEDTPRKRGRGVNDSGKGKG 183
Query: 176 GDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLL 211
D G + T KK + WT+E+H F+ AV L
Sbjct: 184 ASDGGGVQPVTNTTKKKKFEWTSEMHELFVSAVTQL 219
>gi|158513660|sp|A2YQ93.2|PRR37_ORYSI RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
Length = 742
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL VD D + +++ LR C YEV A L + +N+ DLV+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + ++PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 141 RR 142
RR
Sbjct: 182 RR 183
>gi|222424975|dbj|BAH20438.1| AT3G46640 [Arabidopsis thaliana]
Length = 323
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 174 EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
E+GD G E+ + T K+PR+VWT +LH +F+ V LG+ AVPK I+ +MNVEGLTRE
Sbjct: 128 EEGDS-GTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQVMNVEGLTRE 186
Query: 234 NVASHLQKFRLSLKRLGNKTLEA 256
NVASHLQK+RL LKR+ T E
Sbjct: 187 NVASHLQKYRLYLKRMQGLTNEG 209
>gi|115474289|ref|NP_001060743.1| Os07g0695100 [Oryza sativa Japonica Group]
gi|122166891|sp|Q0D3B6.1|PRR37_ORYSJ RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
gi|34394035|dbj|BAC84066.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
gi|113612279|dbj|BAF22657.1| Os07g0695100 [Oryza sativa Japonica Group]
Length = 742
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL VD D + +++ LR C YEV A L + +N+ DLV+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + ++PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 141 RR 142
RR
Sbjct: 182 RR 183
>gi|51571877|dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa Japonica Group]
Length = 742
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL VD D + +++ LR C YEV A L + +N+ DLV+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + ++PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 141 RR 142
RR
Sbjct: 182 RR 183
>gi|414590048|tpg|DAA40619.1| TPA: hypothetical protein ZEAMMB73_710468 [Zea mays]
Length = 596
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 80/135 (59%), Gaps = 7/135 (5%)
Query: 13 EDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDL 72
E ++ + P+ RVL + D + ++ LR+C Y V + + A +L+E N DL
Sbjct: 35 ETPMLPRMPV--RVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDILKEKSFNIDL 92
Query: 73 VISDVYMPDMDGFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINHGACDYLLKPVR 128
V+++V +P M GF LL + +E D +PV+M+S++ +V K + GA D+L+KP+R
Sbjct: 93 VLTEVELPLMSGFLLLSTI-MEHDASKNIPVIMMSSHDSVSMVFKCMLKGASDFLVKPLR 151
Query: 129 MEELKNTWQHVIRRK 143
EL+N WQHV R++
Sbjct: 152 KNELRNLWQHVWRKQ 166
>gi|281308384|gb|ADA58340.1| pseudo-response regulator 3 [Brassica rapa]
Length = 492
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 11/172 (6%)
Query: 20 FPI-GMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
P+ ++VL V++D + I+ L+ C YEVT + A K+L + + DLV+++V
Sbjct: 59 LPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWKVLEDENSCIDLVLTEVV 118
Query: 79 MPDMDGFKLLELVGLEM---DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
MP G LL + ++PV+M+S++ LV K +++GA D+L+KP+R ELKN
Sbjct: 119 MPVNSGTGLLSKIMSHQTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNL 178
Query: 136 WQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDG-------EDEDEDGDDDG 180
WQHV RR + S +KS + +G DED DD+G
Sbjct: 179 WQHVWRRCHSSSGSGSESGIHNKKSVKTESTDEGSEDDASMSDEDNGNDDNG 230
>gi|410716788|gb|AFV78770.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716832|gb|AFV78792.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 8/144 (5%)
Query: 8 GSSSDEDG---VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR 64
GS S+ D V+D+ + R+L D D T + L + LR+C Y+VT + A + +L
Sbjct: 4 GSISNSDAGSSVLDRSCV--RILLCDKDPTNSQKLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 65 ENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACD 121
DL++++V +P GFK+L+ + L P+VM+SA + +VMK + GA D
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 122 YLLKPVRMEELKNTWQHVIRRKKV 145
YL+KP+R+ EL N W H+ RR+++
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRM 145
>gi|410716730|gb|AFV78741.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 8/144 (5%)
Query: 8 GSSSDEDG---VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR 64
GS S+ D V+D+ + R+L D D T + L + LR+C Y+VT + A + +L
Sbjct: 4 GSISNSDAGSSVLDRSCV--RILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 65 ENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACD 121
DL++++V +P GFK+L+ + L P+VM+SA + +VMK + GA D
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 122 YLLKPVRMEELKNTWQHVIRRKKV 145
YL+KP+R+ EL N W H+ RR+++
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRM 145
>gi|410718344|gb|AFV79548.1| pseudo response regulator 1 [Pinus pinaster]
Length = 565
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 8/144 (5%)
Query: 8 GSSSDEDG---VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR 64
GS S+ D V+D+ + R+L D D T + L + LR+C Y+VT + A + +L
Sbjct: 4 GSISNSDAGSSVLDRSCV--RILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 65 ENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACD 121
DL++++V +P GFK+L+ + L P+VM+SA + +VMK + GA D
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 122 YLLKPVRMEELKNTWQHVIRRKKV 145
YL+KP+R+ EL N W H+ RR+++
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRM 145
>gi|410716774|gb|AFV78763.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716780|gb|AFV78766.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716802|gb|AFV78777.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716814|gb|AFV78783.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716864|gb|AFV78808.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716874|gb|AFV78813.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716918|gb|AFV78835.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 8/144 (5%)
Query: 8 GSSSDEDG---VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR 64
GS S+ D V+D+ + R+L D D T + L + LR+C Y+VT + A + +L
Sbjct: 4 GSISNSDAGSSVLDRSCV--RILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 65 ENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACD 121
DL++++V +P GFK+L+ + L P+VM+SA + +VMK + GA D
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 122 YLLKPVRMEELKNTWQHVIRRKKV 145
YL+KP+R+ EL N W H+ RR+++
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRM 145
>gi|410716750|gb|AFV78751.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716798|gb|AFV78775.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716942|gb|AFV78847.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716946|gb|AFV78849.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716952|gb|AFV78852.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716956|gb|AFV78854.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716958|gb|AFV78855.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 8/144 (5%)
Query: 8 GSSSDEDG---VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR 64
GS S+ D V+D+ + R+L D D T + L + LR+C Y+VT + A + +L
Sbjct: 4 GSISNSDAGSSVLDRSCV--RILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 65 ENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACD 121
DL++++V +P GFK+L+ + L P+VM+SA + +VMK + GA D
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 122 YLLKPVRMEELKNTWQHVIRRKKV 145
YL+KP+R+ EL N W H+ RR+++
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRM 145
>gi|356542300|ref|XP_003539607.1| PREDICTED: putative two-component response regulator ARR21-like
isoform 1 [Glycine max]
gi|356542302|ref|XP_003539608.1| PREDICTED: putative two-component response regulator ARR21-like
isoform 2 [Glycine max]
Length = 306
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 60/90 (66%)
Query: 160 SYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPK 219
S ++RK G E+ D + T K+PR+VWT +LH +F+ V LG+ AVPK
Sbjct: 112 SRKQRKIDCGVAEEADSAVRTETSAERTAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPK 171
Query: 220 KILDLMNVEGLTRENVASHLQKFRLSLKRL 249
I+ LMNVEGLTRENVASHLQK+RL LKR+
Sbjct: 172 TIMQLMNVEGLTRENVASHLQKYRLYLKRM 201
>gi|410716834|gb|AFV78793.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716890|gb|AFV78821.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 8/144 (5%)
Query: 8 GSSSDEDG---VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR 64
GS S+ D V+D+ + R+L D D T + L + LR+C Y+VT + A + +L
Sbjct: 4 GSISNSDAGSSVLDRSCV--RILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 65 ENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACD 121
DL++++V +P GFK+L+ + L P+VM+SA + +VMK + GA D
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 122 YLLKPVRMEELKNTWQHVIRRKKV 145
YL+KP+R+ EL N W H+ RR+++
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRM 145
>gi|242036083|ref|XP_002465436.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
gi|241919290|gb|EER92434.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
Length = 765
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RV+ V++D + +++ LR+C YEV A + L + +NN DLV+++V+MP +
Sbjct: 80 LRVMLVENDDSTRQVVSALLRKCCYEVIPAENGSHAWRYLEDLQNNIDLVLTEVFMPCLS 139
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + D+PV+M+S+ +V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 140 GIGLLSKITSHKICKDIPVIMMSSNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 199
Query: 141 RR 142
RR
Sbjct: 200 RR 201
>gi|410716904|gb|AFV78828.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 8/144 (5%)
Query: 8 GSSSDEDG---VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR 64
GS S+ D V+D+ + R+L D D T + L + LR+C Y+VT + A + +L
Sbjct: 4 GSISNSDAGSSVLDRSCV--RILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 65 ENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACD 121
DL++++V +P GFK+L+ + L P+VM+SA + +VMK + GA D
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 122 YLLKPVRMEELKNTWQHVIRRKKV 145
YL+KP+R+ EL N W H+ RR+++
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRM 145
>gi|410716910|gb|AFV78831.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 8/144 (5%)
Query: 8 GSSSDEDG---VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR 64
GS S+ D V+D+ + R+L D D T + L + LR+C Y+VT + A + +L
Sbjct: 4 GSISNSDAGSSVLDRSCV--RILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 65 ENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACD 121
DL++++V +P GFK+L+ + L P+VM+SA + +VMK + GA D
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 122 YLLKPVRMEELKNTWQHVIRRKKV 145
YL+KP+R+ EL N W H+ RR+++
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRM 145
>gi|410716738|gb|AFV78745.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716742|gb|AFV78747.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716744|gb|AFV78748.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716752|gb|AFV78752.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716756|gb|AFV78754.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716768|gb|AFV78760.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716772|gb|AFV78762.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716776|gb|AFV78764.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716784|gb|AFV78768.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716808|gb|AFV78780.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716810|gb|AFV78781.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716828|gb|AFV78790.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 8/144 (5%)
Query: 8 GSSSDEDG---VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR 64
GS S+ D V+D+ + R+L D D T + L + LR+C Y+VT + A + +L
Sbjct: 4 GSISNSDAGSSVLDRSCV--RILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 65 ENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACD 121
DL++++V +P GFK+L+ + L P+VM+SA + +VMK + GA D
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 122 YLLKPVRMEELKNTWQHVIRRKKV 145
YL+KP+R+ EL N W H+ RR+++
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRM 145
>gi|410716876|gb|AFV78814.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716898|gb|AFV78825.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 8/144 (5%)
Query: 8 GSSSDEDG---VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR 64
GS S+ D V+D+ + R+L D D T + L + LR+C Y+VT + A + +L
Sbjct: 4 GSISNSDAGSSVLDRSCV--RILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 65 ENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACD 121
DL++++V +P GFK+L+ + L P+VM+SA + +VMK + GA D
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 122 YLLKPVRMEELKNTWQHVIRRKKV 145
YL+KP+R+ EL N W H+ RR+++
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRM 145
>gi|410716824|gb|AFV78788.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 8/144 (5%)
Query: 8 GSSSDEDG---VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR 64
GS S+ D V+D+ + R+L D D T + L + LR+C Y+VT + A + +L
Sbjct: 4 GSISNSDAGSSVLDRSCV--RILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 65 ENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACD 121
DL++++V +P GFK+L+ + L P+VM+SA + +VMK + GA D
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 122 YLLKPVRMEELKNTWQHVIRRKKV 145
YL+KP+R+ EL N W H+ RR+++
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRM 145
>gi|410716728|gb|AFV78740.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716732|gb|AFV78742.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716734|gb|AFV78743.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716736|gb|AFV78744.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716740|gb|AFV78746.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716746|gb|AFV78749.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716748|gb|AFV78750.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716754|gb|AFV78753.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716758|gb|AFV78755.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716760|gb|AFV78756.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716762|gb|AFV78757.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716764|gb|AFV78758.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716766|gb|AFV78759.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716770|gb|AFV78761.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716782|gb|AFV78767.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716786|gb|AFV78769.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716790|gb|AFV78771.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716792|gb|AFV78772.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716794|gb|AFV78773.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716796|gb|AFV78774.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716800|gb|AFV78776.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716804|gb|AFV78778.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716806|gb|AFV78779.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716812|gb|AFV78782.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716816|gb|AFV78784.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716818|gb|AFV78785.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716820|gb|AFV78786.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716822|gb|AFV78787.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716826|gb|AFV78789.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716830|gb|AFV78791.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716836|gb|AFV78794.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716838|gb|AFV78795.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716840|gb|AFV78796.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716842|gb|AFV78797.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716844|gb|AFV78798.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716846|gb|AFV78799.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716848|gb|AFV78800.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716850|gb|AFV78801.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716852|gb|AFV78802.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716854|gb|AFV78803.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716856|gb|AFV78804.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716858|gb|AFV78805.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716860|gb|AFV78806.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716866|gb|AFV78809.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716868|gb|AFV78810.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716870|gb|AFV78811.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716872|gb|AFV78812.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716878|gb|AFV78815.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716880|gb|AFV78816.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716882|gb|AFV78817.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716884|gb|AFV78818.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716886|gb|AFV78819.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716888|gb|AFV78820.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716892|gb|AFV78822.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716894|gb|AFV78823.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716896|gb|AFV78824.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716900|gb|AFV78826.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716902|gb|AFV78827.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716906|gb|AFV78829.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716912|gb|AFV78832.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716914|gb|AFV78833.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716916|gb|AFV78834.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716920|gb|AFV78836.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716922|gb|AFV78837.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716924|gb|AFV78838.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716926|gb|AFV78839.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716928|gb|AFV78840.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716930|gb|AFV78841.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716932|gb|AFV78842.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716934|gb|AFV78843.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716936|gb|AFV78844.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716938|gb|AFV78845.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716940|gb|AFV78846.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716944|gb|AFV78848.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716948|gb|AFV78850.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716950|gb|AFV78851.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716954|gb|AFV78853.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 8/144 (5%)
Query: 8 GSSSDEDG---VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR 64
GS S+ D V+D+ + R+L D D T + L + LR+C Y+VT + A + +L
Sbjct: 4 GSISNSDAGSSVLDRSCV--RILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 65 ENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACD 121
DL++++V +P GFK+L+ + L P+VM+SA + +VMK + GA D
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 122 YLLKPVRMEELKNTWQHVIRRKKV 145
YL+KP+R+ EL N W H+ RR+++
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRM 145
>gi|410716778|gb|AFV78765.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716862|gb|AFV78807.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 8/144 (5%)
Query: 8 GSSSDEDG---VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR 64
GS S+ D V+D+ + R+L D D T + L + LR+C Y+VT + A + +L
Sbjct: 4 GSISNSDAGSSVLDRSCV--RILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 65 ENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACD 121
DL++++V +P GFK+L+ + L P+VM+SA + +VMK + GA D
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 122 YLLKPVRMEELKNTWQHVIRRKKV 145
YL+KP+R+ EL N W H+ RR+++
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRM 145
>gi|67005935|gb|AAY62604.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
Query: 20 FPI-GMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
P+ ++VL V++D + I+ L+ C YEVT + A ++L + ++ DLV+++V
Sbjct: 59 LPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVD 118
Query: 79 MPDMDGFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
MP G LL + ++PV+M+S++ LV K +++GA D+L+KP+R ELKN
Sbjct: 119 MPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNL 178
Query: 136 WQHVIRR 142
WQHV RR
Sbjct: 179 WQHVWRR 185
>gi|319657093|gb|ADV58925.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657097|gb|ADV58927.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657101|gb|ADV58929.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
Query: 20 FPIGM-RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
P+G +VL V+ D + I+ LR+C YEV I A K+L + N DLV+++V
Sbjct: 91 LPVGSPKVLLVESDDSTRHIVSALLRKCSYEVVGVPNGIEAWKILEDLSNQIDLVLTEVV 150
Query: 79 MPDMDGFKLLELVGLE---MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
+ G LL + + PV+M+S++ LV+K ++ GA D+L+KP+R ELKN
Sbjct: 151 TSGLSGIGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFLVKPIRKNELKNL 210
Query: 136 WQHVIRR 142
WQHV RR
Sbjct: 211 WQHVWRR 217
>gi|18424319|ref|NP_568919.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|334188506|ref|NP_001190574.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|52783244|sp|Q9LVG4.1|APRR3_ARATH RecName: Full=Two-component response regulator-like APRR3; AltName:
Full=Pseudo-response regulator 3
gi|8777349|dbj|BAA96939.1| unnamed protein product [Arabidopsis thaliana]
gi|10281008|dbj|BAB13744.1| pseudo-response regulator 3 [Arabidopsis thaliana]
gi|225879138|dbj|BAH30639.1| hypothetical protein [Arabidopsis thaliana]
gi|332009893|gb|AED97276.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009894|gb|AED97277.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 495
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
Query: 20 FPI-GMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
P+ ++VL V++D + I+ L+ C YEVT + A ++L + ++ DLV+++V
Sbjct: 59 LPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVD 118
Query: 79 MPDMDGFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
MP G LL + ++PV+M+S++ LV K +++GA D+L+KP+R ELKN
Sbjct: 119 MPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNL 178
Query: 136 WQHVIRR 142
WQHV RR
Sbjct: 179 WQHVWRR 185
>gi|297736458|emb|CBI25329.3| unnamed protein product [Vitis vinifera]
Length = 769
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V++D + +++ LR C YEVT + A +L + N+ DLV+++V +P +
Sbjct: 94 LKVLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSILDDLTNHVDLVLAEVALPSLS 153
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S++ +V K ++ GA D+ +KP+R ELKN WQHV
Sbjct: 154 GIGLLCKIMNHKACKNIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIRKNELKNLWQHVW 213
Query: 141 RR 142
R+
Sbjct: 214 RK 215
>gi|357159597|ref|XP_003578497.1| PREDICTED: two-component response regulator-like PRR95-like
[Brachypodium distachyon]
Length = 626
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 84/147 (57%), Gaps = 7/147 (4%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
+ E++G + + + P+ RVL + D + ++ LR+C Y V + + A
Sbjct: 18 VNVEDQGETGQEALRALPMMPV--RVLLAEGDDSTRHVISALLRKCGYHVAAASDGVKAW 75
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGIN 116
++L+E N DLV+++V +P M GF LL + +E + +PV+M+S+ +V K +
Sbjct: 76 EILKEKSFNIDLVLTEVELPAMSGFLLLSTI-MEHEACKNIPVIMMSSNDAVSMVFKCML 134
Query: 117 HGACDYLLKPVRMEELKNTWQHVIRRK 143
GA D+L+KP+R EL+N WQHV R++
Sbjct: 135 KGAADFLVKPIRKNELRNLWQHVWRKQ 161
>gi|147866630|emb|CAN81576.1| hypothetical protein VITISV_027774 [Vitis vinifera]
Length = 137
Score = 96.7 bits (239), Expect = 3e-17, Method: Composition-based stats.
Identities = 52/105 (49%), Positives = 71/105 (67%), Gaps = 4/105 (3%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
V D+F G++VL VDDD T L+ILE+ LR Y VT ++A AL +LRE ++ FD+V+S
Sbjct: 32 VSDQFSTGLKVLVVDDDVTRLRILEQMLR---YHVTTCSQATIALNILREKKDCFDIVLS 88
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGAC 120
D +P M +KLLE VGLE DLP++M+SA T VM+ +H C
Sbjct: 89 DARVPGMIDYKLLEHVGLETDLPIIMMSADGRTGAVMRD-SHSWC 132
>gi|312283289|dbj|BAJ34510.1| unnamed protein product [Thellungiella halophila]
Length = 270
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 6/123 (4%)
Query: 179 DGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASH 238
D +E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVASH
Sbjct: 72 DSAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH 131
Query: 239 LQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSS 298
LQK+RL LKR+ + G +VG D + +H ++ GR SS S
Sbjct: 132 LQKYRLYLKRMQSGG-GGGGGGNVGESDHLFASSPV-----PAHFLHPIGRQSSDHFMPS 185
Query: 299 YVP 301
+VP
Sbjct: 186 FVP 188
>gi|359486449|ref|XP_002275645.2| PREDICTED: two-component response regulator-like PRR73 [Vitis
vinifera]
Length = 747
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V++D + +++ LR C YEVT + A +L + N+ DLV+++V +P +
Sbjct: 72 LKVLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSILDDLTNHVDLVLAEVALPSLS 131
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S++ +V K ++ GA D+ +KP+R ELKN WQHV
Sbjct: 132 GIGLLCKIMNHKACKNIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIRKNELKNLWQHVW 191
Query: 141 RR 142
R+
Sbjct: 192 RK 193
>gi|410716908|gb|AFV78830.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L D D T + L + LR+C Y+VT + A + +L DL++++V +P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
GFK+L+ + L P+VM+SA + +VMK + GA DYL+KP+R+ EL N W H+
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 141 RRKKV 145
RR+++
Sbjct: 141 RRRRM 145
>gi|67005937|gb|AAY62605.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
Query: 20 FPI-GMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
P+ ++VL V++D + I+ L+ C YE+T + A ++L + ++ DLV+++V
Sbjct: 59 LPVRSLKVLLVENDDSTRHIVTALLKNCSYEITAVPDVLEAWRILEDEKSCIDLVLTEVD 118
Query: 79 MPDMDGFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
MP G LL + ++PV+M+S++ LV K +++GA D+L+KP+R ELKN
Sbjct: 119 MPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNL 178
Query: 136 WQHVIRR 142
WQHV RR
Sbjct: 179 WQHVWRR 185
>gi|319657095|gb|ADV58926.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657099|gb|ADV58928.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657103|gb|ADV58930.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 4/127 (3%)
Query: 20 FPIGM-RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
P+G +VL V+ D + I+ LR C YEV I A K+L + N DLV+++V
Sbjct: 91 LPVGSPKVLLVESDDSTRHIVSALLRNCSYEVVGVPNGIEAWKILEDLSNQIDLVLTEVV 150
Query: 79 MPDMDGFKLLELVGLE---MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
+ G LL + + PV+M+S++ LV+K ++ GA D+L+KP+R ELKN
Sbjct: 151 TSGLSGIGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFLVKPIRKNELKNL 210
Query: 136 WQHVIRR 142
WQHV RR
Sbjct: 211 WQHVWRR 217
>gi|334188508|ref|NP_001190575.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009895|gb|AED97278.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 522
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
Query: 20 FPI-GMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
P+ ++VL V++D + I+ L+ C YEVT + A ++L + ++ DLV+++V
Sbjct: 59 LPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVD 118
Query: 79 MPDMDGFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
MP G LL + ++PV+M+S++ LV K +++GA D+L+KP+R ELKN
Sbjct: 119 MPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNL 178
Query: 136 WQHVIRR 142
WQHV RR
Sbjct: 179 WQHVWRR 185
>gi|326522564|dbj|BAK07744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 759
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 7/137 (5%)
Query: 13 EDGVI--DKF-PIG-MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRN 68
+D VI +KF P+ +RVL V++D ++ LR+C YEV + A + L + +N
Sbjct: 68 QDRVIRWEKFLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQN 127
Query: 69 NFDLVISDVYMPDMDGFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLK 125
DLV+++V MP + G LL + + +PV+M+S V K ++ GA D+L+K
Sbjct: 128 RIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVK 187
Query: 126 PVRMEELKNTWQHVIRR 142
P+R ELK WQH+ RR
Sbjct: 188 PIRKNELKTLWQHIWRR 204
>gi|218200317|gb|EEC82744.1| hypothetical protein OsI_27455 [Oryza sativa Indica Group]
Length = 507
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V+ D + +++ LR C YEV A L + +N+ DLV+++V MP +
Sbjct: 61 IKVLLVESDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 120
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + ++PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 121 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 180
Query: 141 RR 142
RR
Sbjct: 181 RR 182
>gi|334715189|gb|AEG90650.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 5/164 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+ VL V+ D +++ LR C Y+V A L + +NN D+V+ +V+MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + ++PV+M+S+ V K ++ GA D+L+ P+R ELKN WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENE 184
RR + S + +K + + + E + G +D H+NE
Sbjct: 200 RRCHSSSGSGSESGIQTQKCGKSKGGK--ESGNNSGSNDSHDNE 241
>gi|356502956|ref|XP_003520280.1| PREDICTED: two-component response regulator ARR14-like [Glycine
max]
Length = 260
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Query: 179 DGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASH 238
D + E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVASH
Sbjct: 71 DNIDEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH 130
Query: 239 LQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGA 274
LQK+RL LKR+ + G V V S D + R+ A
Sbjct: 131 LQKYRLYLKRMQGLS-AGGGVGRVASADPTTDRLFA 165
>gi|334715193|gb|AEG90652.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 5/164 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+ VL V+ D +++ LR C Y+V A L + +NN D+V+ +V+MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + ++PV+M+S+ V K ++ GA D+L+ P+R ELKN WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENE 184
RR + S + +K + + + E + G +D H+NE
Sbjct: 200 RRCHSSSGSGSESGIQTQKCGKSKGGK--ESGNNSGSNDSHDNE 241
>gi|334715191|gb|AEG90651.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 5/164 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+ VL V+ D +++ LR C Y+V A L + +NN D+V+ +V+MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + ++PV+M+S+ V K ++ GA D+L+ P+R ELKN WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENE 184
RR + S + +K + + + E + G +D H+NE
Sbjct: 200 RRCHSSSGSGSESGIQTQKCGKSKGGK--ESGNNSGSNDSHDNE 241
>gi|281308394|gb|ADA58345.1| pseudo-response regulator 5b [Brassica rapa]
Length = 628
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 85/145 (58%), Gaps = 16/145 (11%)
Query: 14 DGVI--DKF--PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL-------KM 62
DG++ ++F I +RVL V+ D + +I+ LR+C Y V + ++ A+ +M
Sbjct: 98 DGLVTWERFLPKISLRVLLVEADDSTRQIISALLRKCSYRVFPFHFSVAAVPDGLKAWEM 157
Query: 63 LRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL----PVVMLSAYSDTKLVMKGINHG 118
LR + DL++++V +P + G+ LL L+ +E DL PV+M+S V K + G
Sbjct: 158 LRGKPESVDLILTEVDLPSISGYALLTLI-MEHDLCKNIPVIMMSTQDSVNTVYKCMLKG 216
Query: 119 ACDYLLKPVRMEELKNTWQHVIRRK 143
A DYL+KP+R EL+N WQHV RR+
Sbjct: 217 AADYLVKPLRRNELRNLWQHVWRRQ 241
>gi|224112925|ref|XP_002316333.1| pseudo response regulator [Populus trichocarpa]
gi|222865373|gb|EEF02504.1| pseudo response regulator [Populus trichocarpa]
Length = 763
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL V++D + ++ LR C YE T + A K+L++ N+ DLV+++V MP +
Sbjct: 89 LKVLLVENDDSTRHVVSALLRNCGYEATAVANGLQAWKLLQDLTNHIDLVLTEVAMPCLS 148
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S++ +V + ++ GA D+L+KP+R ELK WQHV
Sbjct: 149 GIGLLSNIMSHKTCRNIPVIMMSSHDSMNVVFRCLSKGAVDFLVKPIRKNELKILWQHVW 208
Query: 141 RR 142
RR
Sbjct: 209 RR 210
>gi|303283678|ref|XP_003061130.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
gi|226457481|gb|EEH54780.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
Length = 532
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Query: 179 DGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASH 238
DG E++ + K+PR+VWT LH +F+ AV+ LG+ AVPK I+ LMNV+GLTRENVASH
Sbjct: 242 DGSEDD-AQALKRPRLVWTPPLHKRFVDAVSHLGIRNAVPKTIMQLMNVDGLTRENVASH 300
Query: 239 LQKFRLSLKRLGNKTLEAGM 258
LQK+RL LKRL E+ M
Sbjct: 301 LQKYRLYLKRLHGGCSESTM 320
>gi|225434873|ref|XP_002283159.1| PREDICTED: uncharacterized protein LOC100253567 [Vitis vinifera]
Length = 311
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 65/96 (67%), Gaps = 9/96 (9%)
Query: 159 KSYRKRKDQDGEDED-----EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGL 213
+S + RK E+ D E+ +DD ++ T K+PR+VWT +LH +F+ V LG+
Sbjct: 114 ESRKVRKVDCAEEADSAMRTENSNDD----PSARTLKRPRLVWTPQLHKRFVDVVGHLGI 169
Query: 214 DKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
AVPK I+ LMNVEGLTRENVASHLQK+RL LKR+
Sbjct: 170 KNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRM 205
>gi|145351734|ref|XP_001420222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580455|gb|ABO98515.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 145
Score = 95.9 bits (237), Expect = 5e-17, Method: Composition-based stats.
Identities = 50/124 (40%), Positives = 75/124 (60%), Gaps = 4/124 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+ VL VDD++ C + LR+C Y VT AL++LR F L+++DV MP +D
Sbjct: 23 VHVLVVDDERICRTVTSSLLRKCGYRVTTAESGEEALELLRRG-TEFHLLLTDVMMPGID 81
Query: 84 GFKLLELVGLE---MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL++V + D+PV+M+SA + V + I +GA DYLLKPV + +K+ WQHV
Sbjct: 82 GPALLQIVRNDERLRDMPVIMMSANEHSDTVFRCIQYGAEDYLLKPVSRKAVKHMWQHVW 141
Query: 141 RRKK 144
R+ +
Sbjct: 142 RKSQ 145
>gi|255559022|ref|XP_002520534.1| DNA binding protein, putative [Ricinus communis]
gi|223540376|gb|EEF41947.1| DNA binding protein, putative [Ricinus communis]
Length = 316
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 53/70 (75%)
Query: 180 GHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHL 239
G + + T K+PR+VWT +LH +F+ V LG+ AVPK I+ LMNVEGLTRENVASHL
Sbjct: 144 GEDPATARTLKRPRLVWTPQLHKRFVDVVAYLGIKNAVPKTIMQLMNVEGLTRENVASHL 203
Query: 240 QKFRLSLKRL 249
QK+RL LKR+
Sbjct: 204 QKYRLYLKRM 213
>gi|147860003|emb|CAN81044.1| hypothetical protein VITISV_006762 [Vitis vinifera]
Length = 362
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 65/96 (67%), Gaps = 9/96 (9%)
Query: 159 KSYRKRKDQDGEDED-----EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGL 213
+S + RK E+ D E+ +DD ++ T K+PR+VWT +LH +F+ V LG+
Sbjct: 165 ESRKVRKVDCAEEADSAMRTENSNDD----PSARTLKRPRLVWTPQLHKRFVDVVGHLGI 220
Query: 214 DKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
AVPK I+ LMNVEGLTRENVASHLQK+RL LKR+
Sbjct: 221 KNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRM 256
>gi|357126972|ref|XP_003565161.1| PREDICTED: uncharacterized protein LOC100834697 [Brachypodium
distachyon]
Length = 256
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 54/81 (66%)
Query: 169 GEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVE 228
G D D +E T K+PR+VW +LH +F+ V LG+ AVPK I+ LMNVE
Sbjct: 92 GAASDTGADSAAAASELEKTSKRPRMVWNPQLHKRFVDVVAHLGIKSAVPKTIMQLMNVE 151
Query: 229 GLTRENVASHLQKFRLSLKRL 249
GLTRENVASHLQK+RL +KR+
Sbjct: 152 GLTRENVASHLQKYRLYVKRM 172
>gi|334715197|gb|AEG90654.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 291
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 5/164 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+ VL V+ D +++ LR C Y+V A L + +NN D+V+ +V+MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + ++PV+M+S+ V K ++ GA D+L+ P+R ELKN WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENE 184
RR + S + +K + + + E + G +D H+NE
Sbjct: 200 RRCHSSSGSGSESGIQTQKCGKSKGGK--ESGNNSGSNDSHDNE 241
>gi|384252785|gb|EIE26260.1| hypothetical protein COCSUDRAFT_64410 [Coccomyxa subellipsoidea
C-169]
Length = 428
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLREN-RNNFDLVISDVYMPDMDG 84
VL +DD L+I+E+ L++C Y VTV AL +L+ N ++ FDL+++D+ MP +DG
Sbjct: 15 VLLAEDDDLTLRIVEQLLKQCNYRVTVARNGQEALDILQHNDKHCFDLILTDIMMPKVDG 74
Query: 85 FKLLELVG---LEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIR 141
L+ V + LPV+++S+ + + K GA DYL+KP+R E+ W H+ R
Sbjct: 75 MDLVCEVNQRKVWSHLPVIVMSSEQSQEAICKAFTVGAADYLIKPIRKNEVATLWHHIWR 134
Query: 142 R 142
+
Sbjct: 135 K 135
>gi|15238416|ref|NP_196128.1| myb family transcription factor [Arabidopsis thaliana]
gi|10178048|dbj|BAB11531.1| unnamed protein product [Arabidopsis thaliana]
gi|20260578|gb|AAM13187.1| unknown protein [Arabidopsis thaliana]
gi|30023728|gb|AAP13397.1| At5g05090 [Arabidopsis thaliana]
gi|332003444|gb|AED90827.1| myb family transcription factor [Arabidopsis thaliana]
Length = 266
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
Query: 176 GDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENV 235
GD G +E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENV
Sbjct: 68 GDSTG--DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENV 125
Query: 236 ASHLQKFRLSLKRL 249
ASHLQK+RL LKR+
Sbjct: 126 ASHLQKYRLYLKRM 139
>gi|297806505|ref|XP_002871136.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
gi|297316973|gb|EFH47395.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
Length = 265
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
Query: 176 GDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENV 235
GD G +E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENV
Sbjct: 67 GDSTG--DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENV 124
Query: 236 ASHLQKFRLSLKRL 249
ASHLQK+RL LKR+
Sbjct: 125 ASHLQKYRLYLKRM 138
>gi|449455086|ref|XP_004145284.1| PREDICTED: uncharacterized protein LOC101216423 [Cucumis sativus]
gi|449470904|ref|XP_004153145.1| PREDICTED: uncharacterized protein LOC101205712 [Cucumis sativus]
gi|449525506|ref|XP_004169758.1| PREDICTED: uncharacterized LOC101205712 [Cucumis sativus]
Length = 336
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 56/72 (77%)
Query: 178 DDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVAS 237
D+ ++ ++ T K+PR+VWT +LH +F+ V LG+ AVPK I+ LMNVEGLTRENVAS
Sbjct: 144 DNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVAS 203
Query: 238 HLQKFRLSLKRL 249
HLQK+RL LKR+
Sbjct: 204 HLQKYRLYLKRM 215
>gi|15240235|ref|NP_200946.1| two-component response regulator-like APRR1 [Arabidopsis thaliana]
gi|52783243|sp|Q9LKL2.1|APRR1_ARATH RecName: Full=Two-component response regulator-like APRR1; AltName:
Full=ABI3-interacting protein 1; AltName:
Full=Pseudo-response regulator 1; AltName: Full=Timing
of CAB expression 1
gi|9247020|gb|AAF86252.1|AF272039_1 timing of CAB expression 1 protein [Arabidopsis thaliana]
gi|7576354|dbj|BAA94547.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|9757859|dbj|BAB08493.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|20453054|gb|AAM19772.1| AT5g61380/mfb13_150 [Arabidopsis thaliana]
gi|29028744|gb|AAO64751.1| At5g61380/mfb13_150 [Arabidopsis thaliana]
gi|332010077|gb|AED97460.1| two-component response regulator-like APRR1 [Arabidopsis thaliana]
Length = 618
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
+ E KGG DG ID+ + R+L D+D T L + L EC Y+VT A +
Sbjct: 3 LNGECKGG-----DGFIDRSRV--RILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVI 55
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINH 117
L + D++++++ +P G K+L + + DL PV+M+S + +V+K +
Sbjct: 56 DALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKL 115
Query: 118 GACDYLLKPVRMEELKNTWQHVIRRKKV 145
GA DYL+KP+R EL N W H+ RR+++
Sbjct: 116 GAADYLVKPLRTNELLNLWTHMWRRRRM 143
>gi|21537017|gb|AAM61358.1| unknown [Arabidopsis thaliana]
Length = 266
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
Query: 176 GDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENV 235
GD G +E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENV
Sbjct: 68 GDSTG--DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENV 125
Query: 236 ASHLQKFRLSLKRL 249
ASHLQK+RL LKR+
Sbjct: 126 ASHLQKYRLYLKRM 139
>gi|384246908|gb|EIE20396.1| hypothetical protein COCSUDRAFT_9894, partial [Coccomyxa
subellipsoidea C-169]
Length = 59
Score = 95.1 bits (235), Expect = 8e-17, Method: Composition-based stats.
Identities = 43/59 (72%), Positives = 49/59 (83%)
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
KKPR+VWT ELH +F+ AV LG+ AVPK IL LMNVEG+TRENVASHLQK+RL LKR
Sbjct: 1 KKPRLVWTAELHARFMNAVTHLGVKHAVPKTILQLMNVEGMTRENVASHLQKYRLYLKR 59
>gi|242093588|ref|XP_002437284.1| hypothetical protein SORBIDRAFT_10g024183 [Sorghum bicolor]
gi|241915507|gb|EER88651.1| hypothetical protein SORBIDRAFT_10g024183 [Sorghum bicolor]
Length = 92
Score = 95.1 bits (235), Expect = 8e-17, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENR--NNFDLVIS 75
D FPIG+ VLAV+DD C K+LE+ L+ Y + A L MLRE + N FDLVIS
Sbjct: 4 DTFPIGLSVLAVEDDCVCCKVLERKLKYYNYNAIMVMNAQMVLDMLRERKDGNWFDLVIS 63
Query: 76 DVYMPDMDGFKLLELVGLEMDLPV 99
+V +P+MDGF LL+L+GLEMDLPV
Sbjct: 64 NVIIPNMDGFNLLKLIGLEMDLPV 87
>gi|224121124|ref|XP_002318502.1| pseudo response regulator [Populus trichocarpa]
gi|222859175|gb|EEE96722.1| pseudo response regulator [Populus trichocarpa]
Length = 529
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 79/133 (59%), Gaps = 5/133 (3%)
Query: 14 DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLV 73
DG + + + +RVL V+ D + +I+ LR+C Y V + A ++L+ + DL+
Sbjct: 57 DGFLPR--MVLRVLLVEADDSTRQIIAALLRKCSYRVVSVPDGLKAWEILKGRPHGIDLI 114
Query: 74 ISDVYMPDMDGFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRME 130
+++V +P + G+ LL ++ + ++PV+M+S+ V K + GA DYL+KP+R
Sbjct: 115 LTEVDLPSISGYPLLTIIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPLRKN 174
Query: 131 ELKNTWQHVIRRK 143
EL+N WQHV RR+
Sbjct: 175 ELRNLWQHVWRRQ 187
>gi|224144059|ref|XP_002336105.1| predicted protein [Populus trichocarpa]
gi|222872755|gb|EEF09886.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LMNV+GLTRENVASHLQK+
Sbjct: 104 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKY 163
Query: 243 RLSLKRL 249
RL LKR+
Sbjct: 164 RLYLKRM 170
>gi|413949280|gb|AFW81929.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 299
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 54/67 (80%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 79 DEPARTLKRPRLVWTPQLHKRFVDAVAQLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 138
Query: 243 RLSLKRL 249
RL LKR+
Sbjct: 139 RLYLKRM 145
>gi|168009287|ref|XP_001757337.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691460|gb|EDQ77822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Query: 162 RKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKI 221
RK D + ED + G G N N K+ R+VWT +LH +F+ AV LG+ AVPK I
Sbjct: 106 RKMADFELEDANSAG---GLMNSNDEPLKRARLVWTPQLHKRFVEAVGHLGIKNAVPKTI 162
Query: 222 LDLMNVEGLTRENVASHLQKFRLSLKRL 249
+ LMNVEGLTRENVASHLQK+RL LKR+
Sbjct: 163 MQLMNVEGLTRENVASHLQKYRLYLKRM 190
>gi|357472859|ref|XP_003606714.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|357472893|ref|XP_003606731.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355507769|gb|AES88911.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355507786|gb|AES88928.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 312
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 162 RKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKI 221
RK + D E+ + + D + T K+PR+VWT +LH +F+ V LG+ AVPK I
Sbjct: 103 RKHRKIDSVIEEVEAEADS-AVRTTETIKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTI 161
Query: 222 LDLMNVEGLTRENVASHLQKFRLSLKRL 249
+ LMNVEGLTRENVASHLQK+RL LKR+
Sbjct: 162 MQLMNVEGLTRENVASHLQKYRLYLKRM 189
>gi|218194631|gb|EEC77058.1| hypothetical protein OsI_15444 [Oryza sativa Indica Group]
Length = 390
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 122/263 (46%), Gaps = 31/263 (11%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFL--RECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
P G V D+ C ++ E + VTV I AL L+ + DLV++DV
Sbjct: 7 LPAGRLSAMVIDEDKCHADSTSYMLSAELNFSVTVFTSPIKALDFLQNHAEGVDLVLADV 66
Query: 78 YMPDMDGFKLLELV-GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTW 136
+M +M+GF L++ L + V+M+S + + + + GA + KP+ +KN W
Sbjct: 67 HMEEMNGFDFLKVARELHKSIQVIMMSTETTMYTMKRCVKLGAQFLVNKPLDAGTIKNLW 126
Query: 137 QH----VIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGH--ENENSTTQK 190
Q+ V+R +K+ K Q DE ++ EN + T+K
Sbjct: 127 QYVDLKVLRMEKI-----------------KDLLQGIGDESTCANETNSLAENPKNDTKK 169
Query: 191 KPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLG 250
K ++WT L KF+ A+ +LG D A PK I +M V+ + +A+HLQK RL L
Sbjct: 170 KYYLMWTPHLQKKFLHALQILGKD-ASPKNIKKIMGVDNIDCRQIAAHLQKHRLRL---- 224
Query: 251 NKTLEAGMVASVGSKDSSYLRIG 273
K L+ + SKD S RIG
Sbjct: 225 TKDLKKASFTTDTSKDESNSRIG 247
>gi|219887519|gb|ACL54134.1| unknown [Zea mays]
gi|413951205|gb|AFW83854.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 195
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 169 GEDEDEDGDD-DGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNV 227
G E G+ D + + ++PR+VWT +LH +F+ V LG+ KAVPK I++LMNV
Sbjct: 69 GHQEARGGEGADSAAATTTNSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNV 128
Query: 228 EGLTRENVASHLQKFRLSLKRL 249
EGLTRENVASHLQK+RL +KR+
Sbjct: 129 EGLTRENVASHLQKYRLYVKRM 150
>gi|7413556|emb|CAB86035.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 18/190 (9%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D I+ LR C YEV + I A K+L + N+ D+V+++V MP +
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 137
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S++ LV K ++ GA D+L+KP+R ELK WQH
Sbjct: 138 GIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHSS 197
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDE---------DGDDDGHENENSTTQK- 190
Q + + + + +D DE+E DG DG ++S T+K
Sbjct: 198 GSGSESGTHQTQKSVKSKSIKKSDQDSGSSDENENGSIGLNASDGSSDGSGAQSSWTKKA 257
Query: 191 -----KPRVV 195
PR V
Sbjct: 258 VDVDDSPRAV 267
>gi|357512643|ref|XP_003626610.1| Two-component response regulator-like PRR37 [Medicago truncatula]
gi|87240854|gb|ABD32712.1| Response regulator receiver; CCT [Medicago truncatula]
gi|355501625|gb|AES82828.1| Two-component response regulator-like PRR37 [Medicago truncatula]
Length = 636
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
P +RVL V+ D + I+ LR C Y+V + A + L+ + DLV+++V +P
Sbjct: 11 PTMLRVLLVEPDDSTRHIISALLRNCGYKVAAVRDGLKAWETLKNKSLDIDLVLTEVDLP 70
Query: 81 DMDGFKLLELVGLEMD------LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKN 134
+ GF LL + MD +P++M+S+ V K + +GA D+L+KPVR EL+N
Sbjct: 71 SISGFSLLTQI---MDHHNCKNIPLIMMSSQDSVSTVFKFMLNGAVDFLIKPVRRNELRN 127
Query: 135 TWQHVIRR 142
WQHV RR
Sbjct: 128 LWQHVWRR 135
>gi|356559647|ref|XP_003548110.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 706
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 79/132 (59%), Gaps = 8/132 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C + + A + L++ + DL++++V +P +
Sbjct: 32 LRVLLVEADHSTRQIIAALLRKC---IIAVPDGLKAWETLKKKASELDLILTEVELPAIS 88
Query: 84 GFKLLELVGLEMDL----PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
GF LL L+ +E D+ PV+M+S++ + +K + +GA D+L+KP+R EL+N WQHV
Sbjct: 89 GFALLSLI-MEHDICKSIPVIMMSSHDSVNMALKCMLNGAVDFLIKPIRKNELRNLWQHV 147
Query: 140 IRRKKVDPKDQN 151
RR + QN
Sbjct: 148 WRRHTIITPTQN 159
>gi|307109141|gb|EFN57379.1| hypothetical protein CHLNCDRAFT_142774 [Chlorella variabilis]
Length = 998
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 78/127 (61%), Gaps = 4/127 (3%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENR-NNFDLVISDVYM 79
P VL VDD++ +L L +C Y VT + + AL++LR + + F LV++DV M
Sbjct: 45 PSSCHVLLVDDERLTRTVLSSLLLKCGYRVTSASDGLEALRLLRGSAPDTFQLVLTDVCM 104
Query: 80 PDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTW 136
P+++G +LL V + +L PVVM+S+ + V + + GA +YL+KPV +E+++ W
Sbjct: 105 PELNGIQLLSCVKQDANLRAVPVVMMSSVDQEETVAECVQQGAEEYLVKPVTKKEVQHIW 164
Query: 137 QHVIRRK 143
QHV R++
Sbjct: 165 QHVWRKR 171
>gi|38346503|emb|CAE02104.2| OSJNBa0020I02.17 [Oryza sativa Japonica Group]
Length = 376
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 114/236 (48%), Gaps = 29/236 (12%)
Query: 45 ECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGFKLLELV-GLEMDLPVVMLS 103
E + VTV I AL L+ + DLV++DV+M +M+GF L++ L + V+M+S
Sbjct: 20 ELNFSVTVFTSPIKALDFLQNHAEGVDLVLADVHMEEMNGFDFLKVARELHKSIQVIMMS 79
Query: 104 AYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH----VIRRKKVDPKDQNRSPHEFEK 159
+ + + + GA + KP+ +KN WQ+ V+R +K+
Sbjct: 80 TETTMYTMKRCVKLGAQFLVNKPLDAGTIKNLWQYVDLKVLRMEKI-------------- 125
Query: 160 SYRKRKDQDGEDEDEDGDDDGH--ENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAV 217
K Q DE ++ EN + T+KK ++WT L KF+ A+ +LG D A
Sbjct: 126 ---KDLLQGIGDESTCANETNSLAENPKNDTKKKYYLMWTPHLQKKFLHALQILGKD-AS 181
Query: 218 PKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIG 273
PK I +M V+ + +A+HLQK RL L K L+ + SKD S RIG
Sbjct: 182 PKNIKKIMGVDNIDCRQIAAHLQKHRLRL----TKDLKKASFTTDTSKDESNSRIG 233
>gi|297723043|ref|NP_001173885.1| Os04g0348800 [Oryza sativa Japonica Group]
gi|255675355|dbj|BAH92613.1| Os04g0348800 [Oryza sativa Japonica Group]
Length = 806
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 122/263 (46%), Gaps = 31/263 (11%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFL--RECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
P G V D+ C ++ E + VTV I AL L+ + DLV++DV
Sbjct: 21 LPAGRLSAMVIDEDKCHADSTSYMLSAELNFSVTVFTSPIKALDFLQNHAEGVDLVLADV 80
Query: 78 YMPDMDGFKLLELV-GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTW 136
+M +M+GF L++ L + V+M+S + + + + GA + KP+ +KN W
Sbjct: 81 HMEEMNGFDFLKVARELHKSIQVIMMSTETTMYTMKRCVKLGAQFLVNKPLDAGTIKNLW 140
Query: 137 QH----VIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGH--ENENSTTQK 190
Q+ V+R +K+ K Q DE ++ EN + T+K
Sbjct: 141 QYVDLKVLRMEKI-----------------KDLLQGIGDESTCANETNSLAENPKNDTKK 183
Query: 191 KPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLG 250
K ++WT L KF+ A+ +LG D A PK I +M V+ + +A+HLQK RL L
Sbjct: 184 KYYLMWTPHLQKKFLHALQILGKD-ASPKNIKKIMGVDNIDCRQIAAHLQKHRLRL---- 238
Query: 251 NKTLEAGMVASVGSKDSSYLRIG 273
K L+ + SKD S RIG
Sbjct: 239 TKDLKKASFTTDTSKDESNSRIG 261
>gi|307109409|gb|EFN57647.1| hypothetical protein CHLNCDRAFT_142770 [Chlorella variabilis]
Length = 524
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 51/62 (82%)
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
+K R+VWT ELH +FI A++ LGL AVPK IL +MNV+G+TRENVASHLQK+RL L+RL
Sbjct: 203 RKARLVWTQELHNRFINALSHLGLKNAVPKSILAMMNVDGMTRENVASHLQKYRLYLRRL 262
Query: 250 GN 251
G
Sbjct: 263 GG 264
>gi|312282317|dbj|BAJ34024.1| unnamed protein product [Thellungiella halophila]
Length = 325
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 54/67 (80%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 94 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 153
Query: 243 RLSLKRL 249
RL LKR+
Sbjct: 154 RLYLKRM 160
>gi|297829626|ref|XP_002882695.1| hypothetical protein ARALYDRAFT_897268 [Arabidopsis lyrata subsp.
lyrata]
gi|297328535|gb|EFH58954.1| hypothetical protein ARALYDRAFT_897268 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 54/67 (80%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 93 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 152
Query: 243 RLSLKRL 249
RL LKR+
Sbjct: 153 RLYLKRM 159
>gi|297796967|ref|XP_002866368.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
gi|297312203|gb|EFH42627.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
Length = 498
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
Query: 20 FPI-GMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
P+ ++VL V++D + I+ L+ C YEV + + A ++L + ++ DLV+++V
Sbjct: 61 LPVRSLKVLLVENDDSTRHIVTALLKNCSYEVNAVSDVLEAWRILEDEKSCIDLVLTEVV 120
Query: 79 MPDMDGFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
+P G LL + ++PV+M+S++ LV K +++GA D+L+KP+R ELKN
Sbjct: 121 LPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNL 180
Query: 136 WQHVIRR 142
WQHV R+
Sbjct: 181 WQHVWRK 187
>gi|414888254|tpg|DAA64268.1| TPA: hypothetical protein ZEAMMB73_417596 [Zea mays]
Length = 177
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+ VL V+ D + +++ LR C Y+V A L + RNN DLV+++V+MP +
Sbjct: 51 LNVLLVESDDSTRQVVSALLRCCMYQVISAENGQQAWAYLEDKRNNIDLVLTEVFMPGVS 110
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + ++PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 111 GISLLSRIMSHNICKNIPVIMMSSSDAMSTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 170
Query: 141 RRK 143
R++
Sbjct: 171 RQR 173
>gi|15228370|ref|NP_187687.1| myb family transcription factor [Arabidopsis thaliana]
gi|6630554|gb|AAF19573.1|AC011708_16 unknown protein [Arabidopsis thaliana]
gi|332641430|gb|AEE74951.1| myb family transcription factor [Arabidopsis thaliana]
Length = 335
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 54/67 (80%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 97 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 156
Query: 243 RLSLKRL 249
RL LKR+
Sbjct: 157 RLYLKRM 163
>gi|71067060|dbj|BAE16282.1| StPCL1 [Solanum tuberosum]
Length = 314
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 14/194 (7%)
Query: 69 NFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVR 128
N D ++ +V +PD+D L L + +L + +K M +N + + R
Sbjct: 16 NDDRLLWEVGLPDVDDLTPLTLQLIPSELAAAFRISPELSK-TMTDVNRASQNTFSSLQR 74
Query: 129 -----MEELKNTW-----QHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDG-- 176
M + N++ R + V +D+ E + R+ + G E+ D
Sbjct: 75 WHSQDMASMNNSYFKPFSYERTREETVTERDETDLIREGSDPRKLRRVESGGTEEADSSL 134
Query: 177 -DDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENV 235
+++ ++ ++ T K+PR+VWT +LH +FI V LG+ AVPK I+ LMNVEGLTRENV
Sbjct: 135 CNENFADDSSAKTPKRPRLVWTPQLHKRFIEVVAHLGIKGAVPKTIMQLMNVEGLTRENV 194
Query: 236 ASHLQKFRLSLKRL 249
ASHLQK+RL KR+
Sbjct: 195 ASHLQKYRLYTKRM 208
>gi|449532655|ref|XP_004173296.1| PREDICTED: uncharacterized protein LOC101223526, partial [Cucumis
sativus]
Length = 285
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 54/67 (80%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 73 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 132
Query: 243 RLSLKRL 249
RL LKR+
Sbjct: 133 RLYLKRM 139
>gi|224089929|ref|XP_002308869.1| predicted protein [Populus trichocarpa]
gi|222854845|gb|EEE92392.1| predicted protein [Populus trichocarpa]
Length = 318
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 53/70 (75%)
Query: 180 GHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHL 239
G + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LMNV+GLTRENVASHL
Sbjct: 103 GAAGDEPRTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHL 162
Query: 240 QKFRLSLKRL 249
QK+RL LKR+
Sbjct: 163 QKYRLYLKRM 172
>gi|115463879|ref|NP_001055539.1| Os05g0412000 [Oryza sativa Japonica Group]
gi|50878489|gb|AAT85262.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51038221|gb|AAT94024.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113579090|dbj|BAF17453.1| Os05g0412000 [Oryza sativa Japonica Group]
gi|125552332|gb|EAY98041.1| hypothetical protein OsI_19956 [Oryza sativa Indica Group]
gi|222631588|gb|EEE63720.1| hypothetical protein OsJ_18538 [Oryza sativa Japonica Group]
Length = 331
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 54/67 (80%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 102 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 161
Query: 243 RLSLKRL 249
RL LKR+
Sbjct: 162 RLYLKRM 168
>gi|147820325|emb|CAN73573.1| hypothetical protein VITISV_007446 [Vitis vinifera]
Length = 306
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 54/67 (80%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 84 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 143
Query: 243 RLSLKRL 249
RL LKR+
Sbjct: 144 RLYLKRM 150
>gi|357133685|ref|XP_003568454.1| PREDICTED: uncharacterized protein LOC100835635 [Brachypodium
distachyon]
Length = 326
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 54/67 (80%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 89 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 148
Query: 243 RLSLKRL 249
RL LKR+
Sbjct: 149 RLYLKRM 155
>gi|326512880|dbj|BAK03347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 53/67 (79%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 82 EEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 141
Query: 243 RLSLKRL 249
RL LKR+
Sbjct: 142 RLYLKRM 148
>gi|413951204|gb|AFW83853.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 219
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 169 GEDEDEDGDD-DGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNV 227
G E G+ D + + ++PR+VWT +LH +F+ V LG+ KAVPK I++LMNV
Sbjct: 93 GHQEARGGEGADSAAATTTNSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNV 152
Query: 228 EGLTRENVASHLQKFRLSLKRL 249
EGLTRENVASHLQK+RL +KR+
Sbjct: 153 EGLTRENVASHLQKYRLYVKRM 174
>gi|255552463|ref|XP_002517275.1| DNA binding protein, putative [Ricinus communis]
gi|223543538|gb|EEF45068.1| DNA binding protein, putative [Ricinus communis]
Length = 315
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 55/70 (78%)
Query: 180 GHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHL 239
G +E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVASHL
Sbjct: 93 GAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHL 152
Query: 240 QKFRLSLKRL 249
QK+RL LKR+
Sbjct: 153 QKYRLYLKRM 162
>gi|226531730|ref|NP_001147359.1| ARR1 protein-like [Zea mays]
gi|195610500|gb|ACG27080.1| ARR1 protein-like [Zea mays]
Length = 219
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 169 GEDEDEDGDD-DGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNV 227
G E G+ D + + ++PR+VWT +LH +F+ V LG+ KAVPK I++LMNV
Sbjct: 93 GHQEARGGEGADSAAATTTNSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIIELMNV 152
Query: 228 EGLTRENVASHLQKFRLSLKRL 249
EGLTRENVASHLQK+RL +KR+
Sbjct: 153 EGLTRENVASHLQKYRLYVKRM 174
>gi|449437694|ref|XP_004136626.1| PREDICTED: uncharacterized protein LOC101216059 [Cucumis sativus]
gi|449533272|ref|XP_004173600.1| PREDICTED: uncharacterized LOC101216059 [Cucumis sativus]
Length = 286
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 55/70 (78%)
Query: 180 GHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHL 239
G +E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVASHL
Sbjct: 78 GAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHL 137
Query: 240 QKFRLSLKRL 249
QK+RL LKR+
Sbjct: 138 QKYRLYLKRM 147
>gi|225440143|ref|XP_002283226.1| PREDICTED: uncharacterized protein LOC100256764 isoform 1 [Vitis
vinifera]
gi|359481436|ref|XP_003632618.1| PREDICTED: uncharacterized protein LOC100256764 isoform 2 [Vitis
vinifera]
Length = 306
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 54/67 (80%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 84 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 143
Query: 243 RLSLKRL 249
RL LKR+
Sbjct: 144 RLYLKRM 150
>gi|238011812|gb|ACR36941.1| unknown [Zea mays]
gi|408690380|gb|AFU81650.1| G2-like transcription factor, partial [Zea mays subsp. mays]
gi|413945355|gb|AFW78004.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 54/67 (80%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 88 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 147
Query: 243 RLSLKRL 249
RL LKR+
Sbjct: 148 RLYLKRM 154
>gi|449453151|ref|XP_004144322.1| PREDICTED: uncharacterized protein LOC101216969 [Cucumis sativus]
Length = 301
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 54/67 (80%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 89 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 148
Query: 243 RLSLKRL 249
RL LKR+
Sbjct: 149 RLYLKRM 155
>gi|302854384|ref|XP_002958700.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
gi|300255940|gb|EFJ40220.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
Length = 124
Score = 93.6 bits (231), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/120 (40%), Positives = 76/120 (63%), Gaps = 6/120 (5%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNN---FDLVISDVYMPDM 82
VL V+DD+ LK +E+ LR+C Y+VT A+K+L R++ DL+++D+ MP++
Sbjct: 5 VLLVEDDRVTLKTVEQLLRKCNYKVTCAANGREAIKVLTACRHSGVKVDLILTDILMPEV 64
Query: 83 DGFKLL-ELVGLEM--DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
GF L+ E+V + D+PVV++S+ + V++ GA DYL+KP+R EL WQHV
Sbjct: 65 TGFDLINEVVHGDTFCDVPVVVMSSQDSQENVLQAFQAGAADYLIKPIRKNELATLWQHV 124
>gi|15226794|ref|NP_181630.1| myb family transcription factor [Arabidopsis thaliana]
gi|2623311|gb|AAB86457.1| unknown protein [Arabidopsis thaliana]
gi|18252893|gb|AAL62373.1| unknown protein [Arabidopsis thaliana]
gi|20197124|gb|AAM14927.1| unknown protein [Arabidopsis thaliana]
gi|23197780|gb|AAN15417.1| unknown protein [Arabidopsis thaliana]
gi|330254814|gb|AEC09908.1| myb family transcription factor [Arabidopsis thaliana]
Length = 248
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 60/91 (65%)
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFR 243
E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+VEGLTRENVASHLQK+R
Sbjct: 98 EPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYR 157
Query: 244 LSLKRLGNKTLEAGMVASVGSKDSSYLRIGA 274
L L+R+ V DS+ R+ A
Sbjct: 158 LYLRRMQGGNGNGITGGHVIVSDSATDRLFA 188
>gi|224059460|ref|XP_002299857.1| predicted protein [Populus trichocarpa]
gi|222847115|gb|EEE84662.1| predicted protein [Populus trichocarpa]
Length = 186
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 159 KSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVP 218
KS+ + + D E+ DD + + T K+PR+VWT +LH +F+ V LG+ AVP
Sbjct: 71 KSFNETTEADSALRTENWVDDP-SSAAARTLKRPRLVWTPQLHKRFVDVVGHLGMKNAVP 129
Query: 219 KKILDLMNVEGLTRENVASHLQKFRLSLKR 248
K I+ MNVEGLTRENVASHLQK+RL LKR
Sbjct: 130 KTIMQWMNVEGLTRENVASHLQKYRLYLKR 159
>gi|356504655|ref|XP_003521111.1| PREDICTED: uncharacterized protein LOC100815363 [Glycine max]
Length = 312
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 53/66 (80%)
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFR 243
E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+R
Sbjct: 104 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 163
Query: 244 LSLKRL 249
L LKR+
Sbjct: 164 LYLKRM 169
>gi|444434897|dbj|BAM77023.1| PHYTOCLOCK 1 [Triticum monococcum subsp. monococcum]
Length = 285
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 160 SYRKRKDQDGEDE-DEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVP 218
S+ + + GED + D + E + K+ R+VWT +LH +F+ V LG+ AVP
Sbjct: 104 SFPGKGEAAGEDSGNRDNNSAESAGEKAAATKRARLVWTPQLHKRFVEVVAHLGIKSAVP 163
Query: 219 KKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
K I+ LMNVEGLTRENVASHLQK+RL +KR+
Sbjct: 164 KTIMQLMNVEGLTRENVASHLQKYRLYVKRM 194
>gi|297812633|ref|XP_002874200.1| hypothetical protein ARALYDRAFT_910487 [Arabidopsis lyrata subsp.
lyrata]
gi|297320037|gb|EFH50459.1| hypothetical protein ARALYDRAFT_910487 [Arabidopsis lyrata subsp.
lyrata]
Length = 556
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 30/200 (15%)
Query: 2 TAEEKGGSSSDE------------DGVI--DKF--PIGMRVLAVDDDQTCLKILEKFLRE 45
AE GG SS DG++ ++F I +RVL V+ D + +I+ LR+
Sbjct: 14 AAEASGGKSSRRKMRKKDAVDGGGDGLVKWERFLPKIALRVLLVEADDSTRQIISALLRK 73
Query: 46 CQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMD----LPVVM 101
C Y V + A +ML+ + DL++++V +P + G+ LL L+ +E D +PV+
Sbjct: 74 CSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSISGYALLTLI-MEHDICKNIPVI- 131
Query: 102 LSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPKDQNRSPHEFEKSY 161
+ V K + GA DYL+KP+R EL+N WQHV RR+ + +P F
Sbjct: 132 --STDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQHVWRRQT------SLAPDSFPLDE 183
Query: 162 RKRKDQDGEDEDEDGDDDGH 181
R++K + + +G + H
Sbjct: 184 RQQKPEGASANNSNGKREEH 203
>gi|297827739|ref|XP_002881752.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
gi|297327591|gb|EFH58011.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 53/66 (80%)
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFR 243
E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+VEGLTRENVASHLQK+R
Sbjct: 97 EPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYR 156
Query: 244 LSLKRL 249
L L+R+
Sbjct: 157 LYLRRM 162
>gi|51980216|gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa]
Length = 545
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 77/135 (57%), Gaps = 5/135 (3%)
Query: 14 DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLV 73
D ID+ + R+L D+D L+ + L +C Y+VT A + L N D++
Sbjct: 24 DAFIDRSKV--RILVCDNDAKSLEEVSTLLLKCSYQVTSVRSARQVIDALNAEGANIDII 81
Query: 74 ISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRME 130
++++ +P G KLL+ + + DL PV+M+SA + +V+K + GA DYL+KP+R
Sbjct: 82 LAELDLPLAKGMKLLKYINRDNDLRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTN 141
Query: 131 ELKNTWQHVIRRKKV 145
EL N W HV RR+++
Sbjct: 142 ELLNLWTHVWRRRRM 156
>gi|357509257|ref|XP_003624917.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|124361203|gb|ABN09175.1| Homeodomain-related [Medicago truncatula]
gi|355499932|gb|AES81135.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 299
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 53/66 (80%)
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFR 243
E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+R
Sbjct: 84 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 143
Query: 244 LSLKRL 249
L LKR+
Sbjct: 144 LYLKRM 149
>gi|218192572|gb|EEC74999.1| hypothetical protein OsI_11061 [Oryza sativa Indica Group]
Length = 780
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 16/135 (11%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYE-------------VTVTNRAITALKMLRENRNNF 70
+RVL V++D + +++ LR+C YE V + A + L + +N+
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEDSRGFCASRFPSAVIPAENGLHAWQCLEDLQNHI 140
Query: 71 DLVISDVYMPDMDGFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPV 127
DLV+++V MP + G LL + + D+PV+M+S+ V K ++ GA D+L+KP+
Sbjct: 141 DLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPI 200
Query: 128 RMEELKNTWQHVIRR 142
R ELKN WQHV RR
Sbjct: 201 RKNELKNLWQHVWRR 215
>gi|295913732|gb|ADG58105.1| transcription factor [Lycoris longituba]
Length = 230
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 54/68 (79%)
Query: 182 ENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQK 241
E++++ K+PR+VWT +LH +F+ V LG+ AVPK I+ LMNVEGLTR+NVASHLQK
Sbjct: 116 EDQSARALKRPRLVWTPQLHKRFVEVVAHLGIKNAVPKTIVQLMNVEGLTRDNVASHLQK 175
Query: 242 FRLSLKRL 249
+RL LKR+
Sbjct: 176 YRLYLKRM 183
>gi|443302655|gb|AGC82269.1| cAMP phosphodiesterase [Acanthamoeba castellanii]
Length = 621
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 89/144 (61%), Gaps = 7/144 (4%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQY-EVTVTNRAITALKMLRENRNNFDLVISDVYM 79
P +++L VDD+ T ++ K L + Y EV V A++++ ENR+ F+LV+ D++M
Sbjct: 9 PKEIKILVVDDEPTARIVVRKLLEKTGYTEVEVVESGRKAIELI-ENRS-FNLVLCDLHM 66
Query: 80 PDMDGFKLLELVGLEM---DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTW 136
PD+DG +++ V + D P+VM+SA D +V K ++ GA DYLLKP++ +KN W
Sbjct: 67 PDIDGIGVVKAVRKKAHMDDSPIVMMSATEDLNIVYKCLSEGADDYLLKPIQANAVKNLW 126
Query: 137 QHVIRRKKVDPKDQNRSPHEFEKS 160
Q+V R++K + + N HE KS
Sbjct: 127 QNVWRKRK-EKETANMLSHERNKS 149
>gi|297793691|ref|XP_002864730.1| hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp.
lyrata]
gi|297310565|gb|EFH40989.1| hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp.
lyrata]
Length = 623
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
+ E KGG DG ID+ + R+L D+D L + L EC Y+VT A +
Sbjct: 3 LNGECKGG-----DGFIDRSRV--RILLCDNDSKSLGEVFTLLSECSYQVTSVKSARQVI 55
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINH 117
L + D++++++ +P G K+L + + DL PV+M+S + +V+K +
Sbjct: 56 DALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKL 115
Query: 118 GACDYLLKPVRMEELKNTWQHVIRRKKV 145
GA DYL+KP+R EL N W H+ RR+++
Sbjct: 116 GAADYLVKPLRTNELLNLWTHMWRRRRM 143
>gi|242060063|ref|XP_002459177.1| hypothetical protein SORBIDRAFT_03g047330 [Sorghum bicolor]
gi|241931152|gb|EES04297.1| hypothetical protein SORBIDRAFT_03g047330 [Sorghum bicolor]
Length = 284
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 49/60 (81%)
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
K+PR+VWT +LH +F+ V LG+ AVPK I+ LMNVEGLTRENVASHLQK+RL +KR+
Sbjct: 142 KRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRM 201
>gi|444434895|dbj|BAM77022.1| PHYTOCLOCK 1 [Triticum monococcum subsp. aegilopoides]
Length = 285
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 160 SYRKRKDQDGEDE-DEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVP 218
S+ + GED + D + E + K+ R+VWT +LH +F+ V LG+ AVP
Sbjct: 104 SFPGKGAAAGEDSGNRDNNSAESAGEKAAATKRARLVWTPQLHKRFVEVVAHLGIKSAVP 163
Query: 219 KKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
K I+ LMNVEGLTRENVASHLQK+RL +KR+
Sbjct: 164 KTIMQLMNVEGLTRENVASHLQKYRLYVKRM 194
>gi|242072558|ref|XP_002446215.1| hypothetical protein SORBIDRAFT_06g004760 [Sorghum bicolor]
gi|241937398|gb|EES10543.1| hypothetical protein SORBIDRAFT_06g004760 [Sorghum bicolor]
Length = 382
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 125/255 (49%), Gaps = 27/255 (10%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+ V+ VD++ L Q++V V + ALK L+++ + D + +V M +M
Sbjct: 14 LSVIVVDENLCHANTTSCMLANLQFQVVVYVSPVDALKFLKDHERDTDFALVEVNMKEMH 73
Query: 84 GFKLLELV-GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV-IR 141
GF+ L+ L +L V+M+SA + ++ + + GA + KP+ + N WQH+ ++
Sbjct: 74 GFQFLDRSRELHKNLQVIMMSADTTWPMMKRSVELGARFLIKKPLDANTIDNLWQHLDLK 133
Query: 142 RKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELH 201
++ D K KD E + G+ G T K ++WT L
Sbjct: 134 FQRTD----------------KIKDLFPGIEGKMGNAFG----EGTKHKASHLMWTPFLQ 173
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSL-KRLGNKTLEAGMVA 260
KF+ AV LLG + A PKKI LMNV + R+ +++HLQK R + K+L N G +
Sbjct: 174 RKFLQAVELLG-EAATPKKIQFLMNVNSVGRKQISAHLQKHRKKIEKQLHNSN---GNKS 229
Query: 261 SVGSKDSSYLRIGAL 275
S G+ +S LRI +
Sbjct: 230 SNGAPNSQPLRICGI 244
>gi|170172424|dbj|BAG12980.1| RHYTHM OF CHLOROPLAST 75 [Chlamydomonas reinhardtii]
gi|170172426|dbj|BAG12981.1| RHYTHM OF CHLOROPLAST 75 [Chlamydomonas reinhardtii]
Length = 1705
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 49/62 (79%)
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
KKPR+ W+ ELH +F+ A+ LG+ AVPK IL LMNVEGLTRENVASHLQK+R+ LKR
Sbjct: 1271 KKPRINWSQELHARFLNAMFQLGIKNAVPKTILQLMNVEGLTRENVASHLQKYRILLKRH 1330
Query: 250 GN 251
N
Sbjct: 1331 AN 1332
>gi|6996313|emb|CAB75508.1| ABI3-interacting protein, AIP1 [Arabidopsis thaliana]
Length = 618
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
+ E KGG DG ID+ + R+L D+D T L + L EC Y+VT A +
Sbjct: 3 LNGECKGG-----DGFIDRSRV--RILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVI 55
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINH 117
L + D++++++ +P G K+L + + DL PV+M+S + +V+K +
Sbjct: 56 DALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKL 115
Query: 118 GACDYLLKPVRMEELKNTWQHVIRRKKV 145
GA DYL+KP+ EL N W H+ RR+++
Sbjct: 116 GAADYLVKPLLTNELLNLWTHMWRRRRM 143
>gi|302844239|ref|XP_002953660.1| myb-related transcription factor [Volvox carteri f. nagariensis]
gi|300261069|gb|EFJ45284.1| myb-related transcription factor [Volvox carteri f. nagariensis]
Length = 1004
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 48/59 (81%)
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
KKPR+ W+ ELH +F+ A+ LG+ AVPK IL LMNVEGLTRENVASHLQK+R+ LKR
Sbjct: 855 KKPRINWSQELHARFLNAMFQLGIKNAVPKTILQLMNVEGLTRENVASHLQKYRILLKR 913
>gi|145352641|ref|XP_001420647.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580882|gb|ABO98940.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 255
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 49/59 (83%)
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
K+ R+VWT +LH +FI AV LG+ AVPK I+ +MNV+GLTRENVASHLQK+RL+LKR
Sbjct: 108 KRQRLVWTPQLHAQFIAAVQKLGVKTAVPKAIMKIMNVKGLTRENVASHLQKYRLTLKR 166
>gi|159487595|ref|XP_001701808.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
gi|158281027|gb|EDP06783.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
Length = 610
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 28/147 (19%)
Query: 23 GMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKML---RENRNNFDLVISDVYM 79
G V+ V+DD CLK++E+ LR+ Y V+ + ALK+L ++ + DL+++D+ M
Sbjct: 5 GFHVVLVEDDNICLKVVEQLLRKLSYRVSTASDGAAALKVLADCKQRGDKVDLILTDILM 64
Query: 80 PDMDGFKLL-ELVGLE--MDLPVV----------------------MLSAYSDTKLVMKG 114
P++ GF L+ E+V E D+PVV ++S+ + V++
Sbjct: 65 PEVTGFDLINEVVHGETFADIPVVASGTFLGFGRRTVRTVAWSRCQVMSSQDSQESVLQA 124
Query: 115 INHGACDYLLKPVRMEELKNTWQHVIR 141
GA DYL+KP+R EL WQHV R
Sbjct: 125 FQAGAADYLIKPIRKNELATLWQHVWR 151
>gi|384246638|gb|EIE20127.1| hypothetical protein COCSUDRAFT_57853 [Coccomyxa subellipsoidea
C-169]
Length = 402
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 72/137 (52%), Gaps = 25/137 (18%)
Query: 154 PHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGL 213
P + KR Q+G G+DD EN+ + K+PR+VWT +LH F+ AV LGL
Sbjct: 203 PQGMGATSSKRNQQEGPKATSTGEDDADENQ-ARALKRPRLVWTAKLHQCFVQAVEQLGL 261
Query: 214 DKAVPKKILD-----------------------LMNVEGLTRENVASHLQKFRLSLKRLG 250
AVPK I+ LM+V+GLTRENVASHLQK+RL LK+
Sbjct: 262 KNAVPKTIMQACFPTSATRLHPLSCPLQSVLAPLMHVDGLTRENVASHLQKYRLQLKKE- 320
Query: 251 NKTLEAGMVASVGSKDS 267
NK + G + S +DS
Sbjct: 321 NKLDDEGNLISGAGRDS 337
>gi|379025542|dbj|BAL63548.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PVVM+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVVMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|326523357|dbj|BAJ88719.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 160 SYRKRKDQDGEDEDEDGD-DDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVP 218
S+ + G+D + + + E + K+ R+VWT +LH +F+ V LG+ AVP
Sbjct: 96 SFPGKSSAAGDDNNNNSSAESAGEKSAAAATKRARLVWTPQLHKRFVEVVAHLGIKSAVP 155
Query: 219 KKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
K I+ LMNVEGLTRENVASHLQK+RL +KR+
Sbjct: 156 KTIMQLMNVEGLTRENVASHLQKYRLYVKRM 186
>gi|379025744|dbj|BAL63649.1| pseudo-response regulator [Triticum durum]
gi|379025748|dbj|BAL63651.1| pseudo-response regulator [Triticum durum]
gi|379025762|dbj|BAL63658.1| pseudo-response regulator [Triticum durum]
gi|379025764|dbj|BAL63659.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|456359240|dbj|BAM93449.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359248|dbj|BAM93453.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 138 HVIRR 142
HV RR
Sbjct: 154 HVWRR 158
>gi|379025742|dbj|BAL63648.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|303271521|ref|XP_003055122.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
gi|226463096|gb|EEH60374.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
Length = 1334
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 12/124 (9%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+ VL VDD LR CQY+VT + A+ +L E F+L+++DV MPD+D
Sbjct: 10 VHVLLVDD--------AGLLRRCQYQVTTASSGREAMALL-ERGTQFNLLLTDVMMPDVD 60
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL V L ++PVVM+S+ +VM I GA DY++KPV + +K+ W HV
Sbjct: 61 GPTLLHFVRNNPLYAEMPVVMMSSNEHADMVMNCIRLGAEDYIIKPVTNKAVKHMWAHVW 120
Query: 141 RRKK 144
RRK+
Sbjct: 121 RRKQ 124
>gi|379025736|dbj|BAL63645.1| pseudo-response regulator [Triticum durum]
gi|379025738|dbj|BAL63646.1| pseudo-response regulator [Triticum durum]
gi|379025740|dbj|BAL63647.1| pseudo-response regulator [Triticum durum]
gi|379025746|dbj|BAL63650.1| pseudo-response regulator [Triticum durum]
gi|379025750|dbj|BAL63652.1| pseudo-response regulator [Triticum durum]
gi|379025752|dbj|BAL63653.1| pseudo-response regulator [Triticum durum]
gi|379025754|dbj|BAL63654.1| pseudo-response regulator [Triticum durum]
gi|379025756|dbj|BAL63655.1| pseudo-response regulator [Triticum durum]
gi|379025758|dbj|BAL63656.1| pseudo-response regulator [Triticum durum]
gi|379025760|dbj|BAL63657.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|456359228|dbj|BAM93443.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359236|dbj|BAM93447.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359238|dbj|BAM93448.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359242|dbj|BAM93450.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359260|dbj|BAM93459.1| pseudo-response regulator [Triticum dicoccoides]
Length = 662
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 138 HVIRR 142
HV RR
Sbjct: 154 HVWRR 158
>gi|456359230|dbj|BAM93444.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359232|dbj|BAM93445.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359234|dbj|BAM93446.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 138 HVIRR 142
HV RR
Sbjct: 154 HVWRR 158
>gi|357519887|ref|XP_003630232.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355524254|gb|AET04708.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 234
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 6/165 (3%)
Query: 11 SDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNF 70
+D + + +FP + VL VD D L + C Y+VT ++A A K+L E +
Sbjct: 5 NDMESLPSQFPEDLNVLVVDHDTDVLNAAVEMSIPCNYQVTTCSKASFAFKLLTETKGCV 64
Query: 71 DLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRME 130
D+V+ + MPDMD + + V ++++ V+M+ T VMK + +GAC++ +KP
Sbjct: 65 DVVLIEAQMPDMDSYDFVRHVTQQINISVIMMCDDGSTNAVMKAVTNGACEFWIKPFIEN 124
Query: 131 ELKNTWQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDED 175
++KN WQ V R K N + H+ K + + G D + D
Sbjct: 125 QIKNMWQCVAR------KVWNENKHDLGILKVKSQSKRGSDYNAD 163
>gi|242087939|ref|XP_002439802.1| hypothetical protein SORBIDRAFT_09g020340 [Sorghum bicolor]
gi|241945087|gb|EES18232.1| hypothetical protein SORBIDRAFT_09g020340 [Sorghum bicolor]
Length = 332
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 53/67 (79%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+E + T K+PR+VWT +LH +F+ AV LG+ AVPK I+ LM+V+GLTRENVAS LQK+
Sbjct: 93 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASQLQKY 152
Query: 243 RLSLKRL 249
RL LKR+
Sbjct: 153 RLYLKRM 159
>gi|118638624|gb|ABL09468.1| pseudo-response regulator [Triticum aestivum]
gi|383215296|gb|AFG73161.1| pseudo-response regulator [Triticum aestivum]
gi|383215297|gb|AFG73162.1| pseudo-response regulator [Triticum aestivum]
gi|383215298|gb|AFG73163.1| pseudo-response regulator [Triticum aestivum]
Length = 664
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 74/125 (59%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S+++ V+ +++GA D+L KP+R ELKN W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 138 HVIRR 142
HV RR
Sbjct: 153 HVWRR 157
>gi|220030954|gb|ACL78642.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030930|gb|ACL78630.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030932|gb|ACL78631.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030946|gb|ACL78638.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030950|gb|ACL78640.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030890|gb|ACL78610.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|456359114|dbj|BAM93386.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 88
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 89 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 148
Query: 138 HVIRR 142
HV RR
Sbjct: 149 HVWRR 153
>gi|456359102|dbj|BAM93380.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 88
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 89 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 148
Query: 138 HVIRR 142
HV RR
Sbjct: 149 HVWRR 153
>gi|413934855|gb|AFW69406.1| putative two-component response regulator family protein [Zea mays]
Length = 790
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 108/234 (46%), Gaps = 13/234 (5%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR---ENRNNFDLVISDVYMP 80
+ L +D D L + + L + + V A AL ++ + DLV+ +V +
Sbjct: 5 LSALVLDGDPASLSTISETLAKFNFRVVSFQTAEAALDFIKCGAAKAADLDLVLVEVNLN 64
Query: 81 DMD-----GFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
+M L + E+ +P+ + + D + + K +N GAC +LLKP+
Sbjct: 65 NMAPGTSANPDLFHHILNELQVPLTAMCSRDDEEALSKCMNLGACFHLLKPLNRRSFSIL 124
Query: 136 WQHVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDE----DEDGDDDGHENENSTTQKK 191
W + K Q S ++ K+ + E + + N +K+
Sbjct: 125 WHQALEHKSKKAAPQRPSLNDSTKNRMVSPSTEKPKEVLILERNNLSVPQSNGYEEPKKQ 184
Query: 192 PRVVWTTELHTKFIGAVNLLGLDK-AVPKKILDLMNVEGLTRENVASHLQKFRL 244
RV WT ELH KF+ AV LG +K A P+KIL LMNV+GLT +++ SHLQK RL
Sbjct: 185 NRVTWTIELHEKFLEAVEALGGNKSARPEKILHLMNVKGLTVKHIGSHLQKHRL 238
>gi|456359104|dbj|BAM93381.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359106|dbj|BAM93382.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359108|dbj|BAM93383.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359116|dbj|BAM93387.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 88
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 89 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 148
Query: 138 HVIRR 142
HV RR
Sbjct: 149 HVWRR 153
>gi|302760961|ref|XP_002963903.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
gi|300169171|gb|EFJ35774.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
Length = 505
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L D D + +++ L C Y+V+V A +++L + DLV+S+V +P+
Sbjct: 14 VRILLCDKDSATAQEVKELLCRCSYQVSVVKTARQVVEVLNITDSKVDLVLSEVELPNGR 73
Query: 84 GFKLLE-LVGLE--MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
GFK+L+ +V E +P+VM+SA + +V+K + GA DYL+KP+R+ EL N W H+
Sbjct: 74 GFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLRINELLNLWTHMW 133
Query: 141 RRKKV 145
RR+++
Sbjct: 134 RRRRM 138
>gi|220030948|gb|ACL78639.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|414587744|tpg|DAA38315.1| TPA: putative two-component response regulator family protein [Zea
mays]
Length = 392
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 113/233 (48%), Gaps = 34/233 (14%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+ + VD++ + L Q +V V + ALK L++++ + D + +V M +M
Sbjct: 14 LTAIVVDENLCHARAASCMLANLQCKVIVYASPVDALKFLKDHQRDTDFALVEVNMKEMH 73
Query: 84 GFKLLELV-GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV-IR 141
GF+ L++ L L V+M+SA + + + + GA + KP+ + N WQH+ ++
Sbjct: 74 GFQFLDMSRKLHKSLQVIMMSADTTWPTMKRSVELGARFLIKKPLDANTMNNLWQHLDLK 133
Query: 142 RKKVD------PKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVV 195
++ D P + ++ + FE E + QK ++
Sbjct: 134 FQRTDKIKALFPGIEGKTGNAFE-------------------------EGTNKQKGTHLM 168
Query: 196 WTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
WT L KF+ AV LLG D A PKKI LMNV ++R+ +++HLQK R +++
Sbjct: 169 WTPFLQRKFLQAVELLGED-ASPKKIQLLMNVNSVSRKQISAHLQKHRKKVEK 220
>gi|220030962|gb|ACL78646.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|118638644|gb|ABL09478.1| pseudo-response regulator [Triticum aestivum]
gi|118638646|gb|ABL09479.1| pseudo-response regulator [Triticum aestivum]
gi|118638648|gb|ABL09480.1| pseudo-response regulator [Triticum aestivum]
gi|395759125|dbj|BAM31259.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 89
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 90 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 149
Query: 138 HVIRR 142
HV RR
Sbjct: 150 HVWRR 154
>gi|118638651|gb|ABL09481.1| pseudo-response regulator [Aegilops tauschii]
Length = 661
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 89
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 90 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 149
Query: 138 HVIRR 142
HV RR
Sbjct: 150 HVWRR 154
>gi|118638642|gb|ABL09477.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 89
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 90 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 149
Query: 138 HVIRR 142
HV RR
Sbjct: 150 HVWRR 154
>gi|379025526|dbj|BAL63540.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|379025506|dbj|BAL63530.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025508|dbj|BAL63531.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025510|dbj|BAL63532.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|220031042|gb|ACL78686.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030912|gb|ACL78621.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030914|gb|ACL78622.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030894|gb|ACL78612.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|456359140|dbj|BAM93399.1| pseudo-response regulator [Triticum urartu]
gi|456359142|dbj|BAM93400.1| pseudo-response regulator [Triticum urartu]
gi|456359144|dbj|BAM93401.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|220031040|gb|ACL78685.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|456359186|dbj|BAM93422.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 138 HVIRR 142
HV RR
Sbjct: 153 HVWRR 157
>gi|65329125|gb|AAY42113.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp.
spontaneum]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|379025858|dbj|BAL63706.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 138 HVIRR 142
HV RR
Sbjct: 154 HVWRR 158
>gi|379025856|dbj|BAL63705.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025860|dbj|BAL63707.1| pseudo-response regulator [Triticum dicoccoides]
gi|379026014|dbj|BAL63784.1| pseudo-response regulator [Triticum durum]
gi|379026016|dbj|BAL63785.1| pseudo-response regulator [Triticum durum]
gi|379026018|dbj|BAL63786.1| pseudo-response regulator [Triticum durum]
gi|379026020|dbj|BAL63787.1| pseudo-response regulator [Triticum durum]
gi|379026022|dbj|BAL63788.1| pseudo-response regulator [Triticum durum]
gi|379026024|dbj|BAL63789.1| pseudo-response regulator [Triticum durum]
gi|456359268|dbj|BAM93463.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 138 HVIRR 142
HV RR
Sbjct: 154 HVWRR 158
>gi|220030936|gb|ACL78633.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220031098|gb|ACL78714.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|456359266|dbj|BAM93462.1| pseudo-response regulator [Triticum dicoccoides]
Length = 659
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 138 HVIRR 142
HV RR
Sbjct: 153 HVWRR 157
>gi|456359164|dbj|BAM93411.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 138 HVIRR 142
HV RR
Sbjct: 153 HVWRR 157
>gi|456359146|dbj|BAM93402.1| pseudo-response regulator [Triticum urartu]
gi|456359148|dbj|BAM93403.1| pseudo-response regulator [Triticum urartu]
gi|456359150|dbj|BAM93404.1| pseudo-response regulator [Triticum urartu]
gi|456359152|dbj|BAM93405.1| pseudo-response regulator [Triticum urartu]
gi|456359154|dbj|BAM93406.1| pseudo-response regulator [Triticum urartu]
gi|456359156|dbj|BAM93407.1| pseudo-response regulator [Triticum urartu]
gi|456359158|dbj|BAM93408.1| pseudo-response regulator [Triticum urartu]
gi|456359160|dbj|BAM93409.1| pseudo-response regulator [Triticum urartu]
gi|456359162|dbj|BAM93410.1| pseudo-response regulator [Triticum urartu]
gi|456359166|dbj|BAM93412.1| pseudo-response regulator [Triticum urartu]
gi|456359168|dbj|BAM93413.1| pseudo-response regulator [Triticum urartu]
gi|456359170|dbj|BAM93414.1| pseudo-response regulator [Triticum urartu]
gi|456359172|dbj|BAM93415.1| pseudo-response regulator [Triticum urartu]
gi|456359174|dbj|BAM93416.1| pseudo-response regulator [Triticum urartu]
gi|456359176|dbj|BAM93417.1| pseudo-response regulator [Triticum urartu]
gi|456359178|dbj|BAM93418.1| pseudo-response regulator [Triticum urartu]
gi|456359180|dbj|BAM93419.1| pseudo-response regulator [Triticum urartu]
gi|456359182|dbj|BAM93420.1| pseudo-response regulator [Triticum urartu]
gi|456359184|dbj|BAM93421.1| pseudo-response regulator [Triticum urartu]
gi|456359188|dbj|BAM93423.1| pseudo-response regulator [Triticum urartu]
gi|456359190|dbj|BAM93424.1| pseudo-response regulator [Triticum urartu]
gi|456359192|dbj|BAM93425.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 138 HVIRR 142
HV RR
Sbjct: 153 HVWRR 157
>gi|456359128|dbj|BAM93393.1| pseudo-response regulator [Triticum urartu]
gi|456359130|dbj|BAM93394.1| pseudo-response regulator [Triticum urartu]
gi|456359132|dbj|BAM93395.1| pseudo-response regulator [Triticum urartu]
gi|456359134|dbj|BAM93396.1| pseudo-response regulator [Triticum urartu]
gi|456359136|dbj|BAM93397.1| pseudo-response regulator [Triticum urartu]
gi|456359138|dbj|BAM93398.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|379025682|dbj|BAL63618.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|220031158|gb|ACL78744.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220031050|gb|ACL78690.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031058|gb|ACL78694.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031066|gb|ACL78698.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031068|gb|ACL78699.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031070|gb|ACL78700.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031076|gb|ACL78703.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031078|gb|ACL78704.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031094|gb|ACL78712.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031096|gb|ACL78713.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031100|gb|ACL78715.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031102|gb|ACL78716.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031104|gb|ACL78717.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031106|gb|ACL78718.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031108|gb|ACL78719.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031112|gb|ACL78721.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031136|gb|ACL78733.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031146|gb|ACL78738.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031148|gb|ACL78739.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031150|gb|ACL78740.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031156|gb|ACL78743.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031160|gb|ACL78745.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031162|gb|ACL78746.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031180|gb|ACL78755.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031198|gb|ACL78764.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220031046|gb|ACL78688.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031084|gb|ACL78707.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031092|gb|ACL78711.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031116|gb|ACL78723.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031118|gb|ACL78724.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031120|gb|ACL78725.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031122|gb|ACL78726.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031124|gb|ACL78727.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031126|gb|ACL78728.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031128|gb|ACL78729.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031130|gb|ACL78730.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031132|gb|ACL78731.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031134|gb|ACL78732.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031152|gb|ACL78741.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031154|gb|ACL78742.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031196|gb|ACL78763.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031200|gb|ACL78765.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031202|gb|ACL78766.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030942|gb|ACL78636.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030856|gb|ACL78593.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030870|gb|ACL78600.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030876|gb|ACL78603.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030898|gb|ACL78614.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030938|gb|ACL78634.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030944|gb|ACL78637.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030968|gb|ACL78649.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030980|gb|ACL78655.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030982|gb|ACL78656.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030988|gb|ACL78659.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030990|gb|ACL78660.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030854|gb|ACL78592.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030726|gb|ACL78528.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220031018|gb|ACL78674.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031026|gb|ACL78678.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031028|gb|ACL78679.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030964|gb|ACL78647.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030960|gb|ACL78645.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030958|gb|ACL78644.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030866|gb|ACL78598.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030868|gb|ACL78599.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030872|gb|ACL78601.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030878|gb|ACL78604.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030940|gb|ACL78635.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031062|gb|ACL78696.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|302813242|ref|XP_002988307.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
gi|300144039|gb|EFJ10726.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
Length = 508
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L D D + +++ L C Y+V+V A +++L + DLV+S+V +P+
Sbjct: 14 VRILLCDKDSATAQEVKELLCRCSYQVSVVKTARQVVEVLNITDSKVDLVLSEVELPNGR 73
Query: 84 GFKLLE-LVGLE--MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
GFK+L+ +V E +P+VM+SA + +V+K + GA DYL+KP+R+ EL N W H+
Sbjct: 74 GFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLRINELLNLWTHMW 133
Query: 141 RRKKV 145
RR+++
Sbjct: 134 RRRRM 138
>gi|220030966|gb|ACL78648.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030926|gb|ACL78628.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030952|gb|ACL78641.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031038|gb|ACL78684.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030918|gb|ACL78624.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030934|gb|ACL78632.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030996|gb|ACL78663.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031044|gb|ACL78687.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031072|gb|ACL78701.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031074|gb|ACL78702.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031080|gb|ACL78705.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031082|gb|ACL78706.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031086|gb|ACL78708.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031088|gb|ACL78709.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031110|gb|ACL78720.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031138|gb|ACL78734.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031140|gb|ACL78735.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031142|gb|ACL78736.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031144|gb|ACL78737.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031164|gb|ACL78747.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031166|gb|ACL78748.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031176|gb|ACL78753.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031178|gb|ACL78754.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031182|gb|ACL78756.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031186|gb|ACL78758.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031188|gb|ACL78759.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030884|gb|ACL78607.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030908|gb|ACL78619.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030858|gb|ACL78594.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030692|gb|ACL78511.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030696|gb|ACL78513.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030698|gb|ACL78514.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030704|gb|ACL78517.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030708|gb|ACL78519.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030722|gb|ACL78526.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030724|gb|ACL78527.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030728|gb|ACL78529.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030730|gb|ACL78530.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030734|gb|ACL78532.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030736|gb|ACL78533.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030738|gb|ACL78534.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030740|gb|ACL78535.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030742|gb|ACL78536.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030744|gb|ACL78537.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030748|gb|ACL78539.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030750|gb|ACL78540.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030752|gb|ACL78541.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030754|gb|ACL78542.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030758|gb|ACL78544.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030760|gb|ACL78545.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030762|gb|ACL78546.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030764|gb|ACL78547.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030766|gb|ACL78548.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030772|gb|ACL78551.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030774|gb|ACL78552.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030776|gb|ACL78553.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030778|gb|ACL78554.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030782|gb|ACL78556.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030784|gb|ACL78557.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030786|gb|ACL78558.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030788|gb|ACL78559.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030792|gb|ACL78561.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030794|gb|ACL78562.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030796|gb|ACL78563.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030798|gb|ACL78564.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030802|gb|ACL78566.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030804|gb|ACL78567.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030806|gb|ACL78568.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030808|gb|ACL78569.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030810|gb|ACL78570.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030820|gb|ACL78575.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030822|gb|ACL78576.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030824|gb|ACL78577.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030828|gb|ACL78579.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030830|gb|ACL78580.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030832|gb|ACL78581.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030834|gb|ACL78582.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030838|gb|ACL78584.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030846|gb|ACL78588.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030850|gb|ACL78590.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030672|gb|ACL78501.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030674|gb|ACL78502.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030686|gb|ACL78508.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030688|gb|ACL78509.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030690|gb|ACL78510.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030700|gb|ACL78515.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030702|gb|ACL78516.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030710|gb|ACL78520.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030714|gb|ACL78522.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030716|gb|ACL78523.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030718|gb|ACL78524.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030720|gb|ACL78525.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030732|gb|ACL78531.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030746|gb|ACL78538.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030756|gb|ACL78543.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030768|gb|ACL78549.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030770|gb|ACL78550.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030800|gb|ACL78565.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030812|gb|ACL78571.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030814|gb|ACL78572.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030816|gb|ACL78573.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030818|gb|ACL78574.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030826|gb|ACL78578.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030844|gb|ACL78587.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030852|gb|ACL78591.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|159154683|gb|ABW93669.1| pseudo-response regulator [Triticum turgidum]
gi|379025504|dbj|BAL63529.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025524|dbj|BAL63539.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025530|dbj|BAL63542.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025532|dbj|BAL63543.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025536|dbj|BAL63545.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025544|dbj|BAL63549.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025546|dbj|BAL63550.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025548|dbj|BAL63551.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025550|dbj|BAL63552.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025552|dbj|BAL63553.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025554|dbj|BAL63554.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025556|dbj|BAL63555.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025558|dbj|BAL63556.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025560|dbj|BAL63557.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025562|dbj|BAL63558.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025564|dbj|BAL63559.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025642|dbj|BAL63598.1| pseudo-response regulator [Triticum durum]
gi|379025766|dbj|BAL63660.1| pseudo-response regulator [Triticum durum]
gi|456359070|dbj|BAM93364.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359090|dbj|BAM93374.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359200|dbj|BAM93429.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
gi|456359202|dbj|BAM93430.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359210|dbj|BAM93434.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359212|dbj|BAM93435.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359218|dbj|BAM93438.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|220031022|gb|ACL78676.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030956|gb|ACL78643.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030862|gb|ACL78596.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031064|gb|ACL78697.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|456359120|dbj|BAM93389.1| pseudo-response regulator [Triticum urartu]
gi|456359122|dbj|BAM93390.1| pseudo-response regulator [Triticum urartu]
gi|456359124|dbj|BAM93391.1| pseudo-response regulator [Triticum urartu]
gi|456359126|dbj|BAM93392.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|65329050|gb|AAY42109.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030874|gb|ACL78602.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030916|gb|ACL78623.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031014|gb|ACL78672.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220031034|gb|ACL78682.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031048|gb|ACL78689.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031054|gb|ACL78692.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030880|gb|ACL78605.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030790|gb|ACL78560.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|65329070|gb|AAY42110.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|65329087|gb|AAY42111.1| pseudo-response regulator PPD-H1 [Hordeum vulgare]
gi|65329107|gb|AAY42112.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030976|gb|ACL78653.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030978|gb|ACL78654.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030994|gb|ACL78662.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220031016|gb|ACL78673.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031020|gb|ACL78675.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031024|gb|ACL78677.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030970|gb|ACL78650.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030910|gb|ACL78620.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031060|gb|ACL78695.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030706|gb|ACL78518.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030676|gb|ACL78503.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030680|gb|ACL78505.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030694|gb|ACL78512.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030842|gb|ACL78586.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030848|gb|ACL78589.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|456359204|dbj|BAM93431.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|379025520|dbj|BAL63537.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025522|dbj|BAL63538.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359208|dbj|BAM93433.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|220030902|gb|ACL78616.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030904|gb|ACL78617.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030922|gb|ACL78626.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030972|gb|ACL78651.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030888|gb|ACL78609.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030882|gb|ACL78606.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030896|gb|ACL78613.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030920|gb|ACL78625.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031032|gb|ACL78681.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030860|gb|ACL78595.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031184|gb|ACL78757.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220031174|gb|ACL78752.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220031172|gb|ACL78751.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030886|gb|ACL78608.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030892|gb|ACL78611.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030900|gb|ACL78615.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031030|gb|ACL78680.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031036|gb|ACL78683.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031052|gb|ACL78691.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031056|gb|ACL78693.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030678|gb|ACL78504.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030682|gb|ACL78506.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030684|gb|ACL78507.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030712|gb|ACL78521.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030780|gb|ACL78555.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030836|gb|ACL78583.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030840|gb|ACL78585.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220031090|gb|ACL78710.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031114|gb|ACL78722.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031168|gb|ACL78749.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031170|gb|ACL78750.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031190|gb|ACL78760.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031192|gb|ACL78761.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031194|gb|ACL78762.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|220030906|gb|ACL78618.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030928|gb|ACL78629.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|62868803|gb|AAY17586.1| pseudo-response regulator [Hordeum vulgare subsp. vulgare]
Length = 674
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|357519851|ref|XP_003630214.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355524236|gb|AET04690.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 265
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 73/132 (55%)
Query: 11 SDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNF 70
+D + + +FP + VL VD D L + C Y+VT ++A A K+L E +
Sbjct: 5 NDMESLPSQFPEDLNVLVVDHDTDVLNAAVEMSIPCNYQVTTCSKASFAFKLLTETKGCV 64
Query: 71 DLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRME 130
D+V+ + MPDMD + + V ++++ V+M+ T VMK + +GAC++ +KP
Sbjct: 65 DVVLIEAQMPDMDSYDFVRHVTQQINISVIMMCDDGSTNAVMKAVTNGACEFWIKPFIEN 124
Query: 131 ELKNTWQHVIRR 142
++KN WQ V R+
Sbjct: 125 QIKNMWQCVARK 136
>gi|118638616|gb|ABL09464.1| pseudo-response regulator [Triticum aestivum]
gi|118638620|gb|ABL09466.1| pseudo-response regulator [Triticum aestivum]
gi|118638622|gb|ABL09467.1| pseudo-response regulator [Triticum aestivum]
gi|379025454|dbj|BAL63504.1| pseudo-response regulator [Triticum turgidum]
gi|379025456|dbj|BAL63505.1| pseudo-response regulator [Triticum turgidum]
gi|379025458|dbj|BAL63506.1| pseudo-response regulator [Triticum turgidum]
gi|379025460|dbj|BAL63507.1| pseudo-response regulator [Triticum turgidum]
gi|379025462|dbj|BAL63508.1| pseudo-response regulator [Triticum turgidum]
gi|379025464|dbj|BAL63509.1| pseudo-response regulator [Triticum carthlicum]
gi|379025466|dbj|BAL63510.1| pseudo-response regulator [Triticum carthlicum]
gi|379025468|dbj|BAL63511.1| pseudo-response regulator [Triticum carthlicum]
gi|379025470|dbj|BAL63512.1| pseudo-response regulator [Triticum carthlicum]
gi|379025472|dbj|BAL63513.1| pseudo-response regulator [Triticum carthlicum]
gi|379025474|dbj|BAL63514.1| pseudo-response regulator [Triticum turanicum]
gi|379025476|dbj|BAL63515.1| pseudo-response regulator [Triticum turanicum]
gi|379025478|dbj|BAL63516.1| pseudo-response regulator [Triticum turanicum]
gi|379025482|dbj|BAL63518.1| pseudo-response regulator [Triticum turanicum]
gi|379025490|dbj|BAL63522.1| pseudo-response regulator [Triticum polonicum]
gi|379025492|dbj|BAL63523.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025494|dbj|BAL63524.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025496|dbj|BAL63525.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025498|dbj|BAL63526.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025500|dbj|BAL63527.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025502|dbj|BAL63528.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025512|dbj|BAL63533.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025514|dbj|BAL63534.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025518|dbj|BAL63536.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025528|dbj|BAL63541.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025534|dbj|BAL63544.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025538|dbj|BAL63546.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025540|dbj|BAL63547.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025568|dbj|BAL63561.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025570|dbj|BAL63562.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025572|dbj|BAL63563.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025698|dbj|BAL63626.1| pseudo-response regulator [Triticum durum]
gi|379025700|dbj|BAL63627.1| pseudo-response regulator [Triticum durum]
gi|379025702|dbj|BAL63628.1| pseudo-response regulator [Triticum durum]
gi|379025704|dbj|BAL63629.1| pseudo-response regulator [Triticum durum]
gi|379025706|dbj|BAL63630.1| pseudo-response regulator [Triticum durum]
gi|379025708|dbj|BAL63631.1| pseudo-response regulator [Triticum durum]
gi|379025710|dbj|BAL63632.1| pseudo-response regulator [Triticum durum]
gi|379025712|dbj|BAL63633.1| pseudo-response regulator [Triticum durum]
gi|379025714|dbj|BAL63634.1| pseudo-response regulator [Triticum durum]
gi|379025716|dbj|BAL63635.1| pseudo-response regulator [Triticum durum]
gi|379025718|dbj|BAL63636.1| pseudo-response regulator [Triticum durum]
gi|379025720|dbj|BAL63637.1| pseudo-response regulator [Triticum durum]
gi|379025722|dbj|BAL63638.1| pseudo-response regulator [Triticum durum]
gi|379025724|dbj|BAL63639.1| pseudo-response regulator [Triticum durum]
gi|379025726|dbj|BAL63640.1| pseudo-response regulator [Triticum durum]
gi|379025728|dbj|BAL63641.1| pseudo-response regulator [Triticum durum]
gi|379025730|dbj|BAL63642.1| pseudo-response regulator [Triticum durum]
gi|379025732|dbj|BAL63643.1| pseudo-response regulator [Triticum durum]
gi|395759117|dbj|BAM31255.1| pseudo-response regulator [Triticum aestivum]
gi|395759119|dbj|BAM31256.1| pseudo-response regulator [Triticum aestivum]
gi|456359198|dbj|BAM93428.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 668
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|449450912|ref|XP_004143206.1| PREDICTED: uncharacterized protein LOC101203812 [Cucumis sativus]
gi|449496718|ref|XP_004160206.1| PREDICTED: uncharacterized protein LOC101226439 [Cucumis sativus]
Length = 297
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 65/101 (64%), Gaps = 7/101 (6%)
Query: 186 STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLS 245
+ T K+PR+ WT +LH +F+ V+ LGL A PK I+ +MNVEGLTRENVASHLQK+RL
Sbjct: 145 ARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQMMNVEGLTRENVASHLQKYRLY 204
Query: 246 LKR--LGNKTLEA--GMVASVGSKDSSYLRIGALDGFGGSH 282
LKR + + T EA M + + DSS GA D G +
Sbjct: 205 LKRTQISSTTDEALVPMPVTQNAHDSS---PGAADSHGNDY 242
>gi|379026042|dbj|BAL63798.1| pseudo-response regulator [Triticum durum]
Length = 665
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 138 HVIRR 142
HV RR
Sbjct: 154 HVWRR 158
>gi|379025778|dbj|BAL63666.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 138 HVIRR 142
HV RR
Sbjct: 153 HVWRR 157
>gi|379025768|dbj|BAL63661.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025770|dbj|BAL63662.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025894|dbj|BAL63724.1| pseudo-response regulator [Triticum turanicum]
gi|379025896|dbj|BAL63725.1| pseudo-response regulator [Triticum turanicum]
gi|379025898|dbj|BAL63726.1| pseudo-response regulator [Triticum turanicum]
gi|379025900|dbj|BAL63727.1| pseudo-response regulator [Triticum turanicum]
gi|379025902|dbj|BAL63728.1| pseudo-response regulator [Triticum turanicum]
gi|379025910|dbj|BAL63732.1| pseudo-response regulator [Triticum polonicum]
gi|379025936|dbj|BAL63745.1| pseudo-response regulator [Triticum carthlicum]
gi|379026026|dbj|BAL63790.1| pseudo-response regulator [Triticum durum]
gi|379026028|dbj|BAL63791.1| pseudo-response regulator [Triticum durum]
gi|379026030|dbj|BAL63792.1| pseudo-response regulator [Triticum durum]
gi|379026032|dbj|BAL63793.1| pseudo-response regulator [Triticum durum]
gi|379026034|dbj|BAL63794.1| pseudo-response regulator [Triticum durum]
gi|379026036|dbj|BAL63795.1| pseudo-response regulator [Triticum durum]
gi|379026038|dbj|BAL63796.1| pseudo-response regulator [Triticum durum]
gi|379026040|dbj|BAL63797.1| pseudo-response regulator [Triticum durum]
gi|379026044|dbj|BAL63799.1| pseudo-response regulator [Triticum durum]
gi|379026046|dbj|BAL63800.1| pseudo-response regulator [Triticum durum]
gi|379026048|dbj|BAL63801.1| pseudo-response regulator [Triticum durum]
gi|379026050|dbj|BAL63802.1| pseudo-response regulator [Triticum durum]
gi|379026052|dbj|BAL63803.1| pseudo-response regulator [Triticum durum]
gi|379026054|dbj|BAL63804.1| pseudo-response regulator [Triticum durum]
gi|379026056|dbj|BAL63805.1| pseudo-response regulator [Triticum durum]
gi|379026058|dbj|BAL63806.1| pseudo-response regulator [Triticum durum]
gi|379026060|dbj|BAL63807.1| pseudo-response regulator [Triticum durum]
gi|379026072|dbj|BAL63813.1| pseudo-response regulator [Triticum durum]
gi|379026074|dbj|BAL63814.1| pseudo-response regulator [Triticum durum]
gi|379026076|dbj|BAL63815.1| pseudo-response regulator [Triticum durum]
gi|379026078|dbj|BAL63816.1| pseudo-response regulator [Triticum durum]
gi|379026080|dbj|BAL63817.1| pseudo-response regulator [Triticum durum]
gi|456359288|dbj|BAM93473.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 665
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 138 HVIRR 142
HV RR
Sbjct: 154 HVWRR 158
>gi|220030864|gb|ACL78597.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030984|gb|ACL78657.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030986|gb|ACL78658.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030992|gb|ACL78661.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030998|gb|ACL78664.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031000|gb|ACL78665.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031002|gb|ACL78666.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031004|gb|ACL78667.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031006|gb|ACL78668.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031008|gb|ACL78669.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031010|gb|ACL78670.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031012|gb|ACL78671.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFM--HG 100
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 101 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 160
Query: 138 HVIRR 142
HV RR
Sbjct: 161 HVWRR 165
>gi|379025940|dbj|BAL63747.1| pseudo-response regulator [Triticum carthlicum]
gi|456359264|dbj|BAM93461.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 138 HVIRR 142
HV RR
Sbjct: 153 HVWRR 157
>gi|379025838|dbj|BAL63696.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025840|dbj|BAL63697.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025842|dbj|BAL63698.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025844|dbj|BAL63699.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 661
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 138 HVIRR 142
HV RR
Sbjct: 153 HVWRR 157
>gi|118638628|gb|ABL09470.1| pseudo-response regulator [Triticum aestivum]
gi|118638630|gb|ABL09471.1| pseudo-response regulator [Triticum aestivum]
gi|118638632|gb|ABL09472.1| pseudo-response regulator [Triticum aestivum]
gi|118638634|gb|ABL09473.1| pseudo-response regulator [Triticum aestivum]
gi|118638636|gb|ABL09474.1| pseudo-response regulator [Triticum aestivum]
gi|118638638|gb|ABL09475.1| pseudo-response regulator [Triticum aestivum]
gi|118638640|gb|ABL09476.1| pseudo-response regulator [Triticum aestivum]
gi|159138015|gb|ABW89014.1| pseudo-response regulator [Triticum turgidum]
gi|159138017|gb|ABW89015.1| pseudo-response regulator [Triticum turgidum]
gi|159138019|gb|ABW89016.1| pseudo-response regulator [Triticum turgidum]
gi|159138021|gb|ABW89017.1| pseudo-response regulator [Triticum turgidum]
gi|379025772|dbj|BAL63663.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025774|dbj|BAL63664.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025776|dbj|BAL63665.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025780|dbj|BAL63667.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025782|dbj|BAL63668.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025784|dbj|BAL63669.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025786|dbj|BAL63670.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025788|dbj|BAL63671.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025790|dbj|BAL63672.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025792|dbj|BAL63673.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025794|dbj|BAL63674.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025796|dbj|BAL63675.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025800|dbj|BAL63677.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025802|dbj|BAL63678.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025804|dbj|BAL63679.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025806|dbj|BAL63680.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025808|dbj|BAL63681.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025810|dbj|BAL63682.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025812|dbj|BAL63683.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025814|dbj|BAL63684.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025816|dbj|BAL63685.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025818|dbj|BAL63686.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025820|dbj|BAL63687.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025822|dbj|BAL63688.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025824|dbj|BAL63689.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025826|dbj|BAL63690.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025828|dbj|BAL63691.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025830|dbj|BAL63692.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025832|dbj|BAL63693.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025834|dbj|BAL63694.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025836|dbj|BAL63695.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025850|dbj|BAL63702.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025852|dbj|BAL63703.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025854|dbj|BAL63704.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025864|dbj|BAL63709.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025866|dbj|BAL63710.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025868|dbj|BAL63711.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025870|dbj|BAL63712.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025872|dbj|BAL63713.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025874|dbj|BAL63714.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025876|dbj|BAL63715.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025878|dbj|BAL63716.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025880|dbj|BAL63717.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025882|dbj|BAL63718.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025884|dbj|BAL63719.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025886|dbj|BAL63720.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025888|dbj|BAL63721.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025892|dbj|BAL63723.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025912|dbj|BAL63733.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025914|dbj|BAL63734.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025916|dbj|BAL63735.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025918|dbj|BAL63736.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025920|dbj|BAL63737.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025922|dbj|BAL63738.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025926|dbj|BAL63740.1| pseudo-response regulator [Triticum turgidum]
gi|379025928|dbj|BAL63741.1| pseudo-response regulator [Triticum turgidum]
gi|379025930|dbj|BAL63742.1| pseudo-response regulator [Triticum turgidum]
gi|379025932|dbj|BAL63743.1| pseudo-response regulator [Triticum turgidum]
gi|379025934|dbj|BAL63744.1| pseudo-response regulator [Triticum carthlicum]
gi|379025938|dbj|BAL63746.1| pseudo-response regulator [Triticum carthlicum]
gi|379025942|dbj|BAL63748.1| pseudo-response regulator [Triticum carthlicum]
gi|379025944|dbj|BAL63749.1| pseudo-response regulator [Triticum durum]
gi|379025946|dbj|BAL63750.1| pseudo-response regulator [Triticum durum]
gi|379025948|dbj|BAL63751.1| pseudo-response regulator [Triticum durum]
gi|379025950|dbj|BAL63752.1| pseudo-response regulator [Triticum durum]
gi|379025952|dbj|BAL63753.1| pseudo-response regulator [Triticum durum]
gi|379025954|dbj|BAL63754.1| pseudo-response regulator [Triticum durum]
gi|379025956|dbj|BAL63755.1| pseudo-response regulator [Triticum durum]
gi|379025958|dbj|BAL63756.1| pseudo-response regulator [Triticum durum]
gi|379025960|dbj|BAL63757.1| pseudo-response regulator [Triticum durum]
gi|379025962|dbj|BAL63758.1| pseudo-response regulator [Triticum durum]
gi|379025964|dbj|BAL63759.1| pseudo-response regulator [Triticum durum]
gi|379025966|dbj|BAL63760.1| pseudo-response regulator [Triticum durum]
gi|379025968|dbj|BAL63761.1| pseudo-response regulator [Triticum durum]
gi|379025970|dbj|BAL63762.1| pseudo-response regulator [Triticum durum]
gi|379025972|dbj|BAL63763.1| pseudo-response regulator [Triticum durum]
gi|379025974|dbj|BAL63764.1| pseudo-response regulator [Triticum durum]
gi|379025976|dbj|BAL63765.1| pseudo-response regulator [Triticum durum]
gi|379025978|dbj|BAL63766.1| pseudo-response regulator [Triticum durum]
gi|379025980|dbj|BAL63767.1| pseudo-response regulator [Triticum durum]
gi|379025982|dbj|BAL63768.1| pseudo-response regulator [Triticum durum]
gi|379025984|dbj|BAL63769.1| pseudo-response regulator [Triticum durum]
gi|379025986|dbj|BAL63770.1| pseudo-response regulator [Triticum durum]
gi|379025988|dbj|BAL63771.1| pseudo-response regulator [Triticum durum]
gi|379025990|dbj|BAL63772.1| pseudo-response regulator [Triticum durum]
gi|379025992|dbj|BAL63773.1| pseudo-response regulator [Triticum durum]
gi|379025994|dbj|BAL63774.1| pseudo-response regulator [Triticum durum]
gi|379025996|dbj|BAL63775.1| pseudo-response regulator [Triticum durum]
gi|379025998|dbj|BAL63776.1| pseudo-response regulator [Triticum durum]
gi|379026000|dbj|BAL63777.1| pseudo-response regulator [Triticum durum]
gi|379026002|dbj|BAL63778.1| pseudo-response regulator [Triticum durum]
gi|379026004|dbj|BAL63779.1| pseudo-response regulator [Triticum durum]
gi|379026006|dbj|BAL63780.1| pseudo-response regulator [Triticum durum]
gi|379026008|dbj|BAL63781.1| pseudo-response regulator [Triticum durum]
gi|379026010|dbj|BAL63782.1| pseudo-response regulator [Triticum durum]
gi|379026012|dbj|BAL63783.1| pseudo-response regulator [Triticum durum]
gi|379026062|dbj|BAL63808.1| pseudo-response regulator [Triticum durum]
gi|379026064|dbj|BAL63809.1| pseudo-response regulator [Triticum durum]
gi|379026066|dbj|BAL63810.1| pseudo-response regulator [Triticum durum]
gi|379026068|dbj|BAL63811.1| pseudo-response regulator [Triticum durum]
gi|379026070|dbj|BAL63812.1| pseudo-response regulator [Triticum durum]
gi|379026084|dbj|BAL63819.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|383215300|gb|AFG73164.1| pseudo-response regulator [Triticum aestivum]
gi|395759121|dbj|BAM31257.1| pseudo-response regulator [Triticum aestivum]
gi|395759123|dbj|BAM31258.1| pseudo-response regulator [Triticum aestivum]
gi|456359244|dbj|BAM93451.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359246|dbj|BAM93452.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359270|dbj|BAM93464.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359272|dbj|BAM93465.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359274|dbj|BAM93466.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359276|dbj|BAM93467.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359278|dbj|BAM93468.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359280|dbj|BAM93469.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359282|dbj|BAM93470.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359284|dbj|BAM93471.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359286|dbj|BAM93472.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 664
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 138 HVIRR 142
HV RR
Sbjct: 153 HVWRR 157
>gi|456359262|dbj|BAM93460.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 138 HVIRR 142
HV RR
Sbjct: 154 HVWRR 158
>gi|379025890|dbj|BAL63722.1| pseudo-response regulator [Triticum dicoccoides]
Length = 660
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 138 HVIRR 142
HV RR
Sbjct: 154 HVWRR 158
>gi|379025516|dbj|BAL63535.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359206|dbj|BAM93432.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|456359290|dbj|BAM93474.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 664
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 35 IRVLLVETDDSTQQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 138 HVIRR 142
HV RR
Sbjct: 153 HVWRR 157
>gi|379025862|dbj|BAL63708.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 138 HVIRR 142
HV RR
Sbjct: 153 HVWRR 157
>gi|379025488|dbj|BAL63521.1| pseudo-response regulator [Triticum polonicum]
gi|379025734|dbj|BAL63644.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|379025798|dbj|BAL63676.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 138 HVIRR 142
HV RR
Sbjct: 153 HVWRR 157
>gi|71067066|dbj|BAE16285.1| SbPCL1 [Sorghum bicolor]
Length = 200
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 48/59 (81%)
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
K+PR+VWT +LH +F+ V LG+ AVPK I+ LMNVEGLTRENVASHLQK+RL +KR
Sbjct: 142 KRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKR 200
>gi|419193836|gb|AFX68729.1| APRR2-like protein [Solanum lycopersicum]
Length = 560
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 54/73 (73%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
N + +KK +V WT ELH KF+ AV LG+D+A+P +ILDLM VEGLTR NVASHLQK+
Sbjct: 308 NGTKSNRKKIKVDWTPELHKKFVQAVEQLGIDQAIPSRILDLMKVEGLTRHNVASHLQKY 367
Query: 243 RLSLKRLGNKTLE 255
R+ K++ K +E
Sbjct: 368 RMHRKQILPKEVE 380
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G++VL +D+D ++ L + Y V AL + F + I +V
Sbjct: 14 FPKGLKVLLLDEDSNSAAEMKSRLEKMDYIVYSFCNESEALTAISSKSEGFHVAIVEVSA 73
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
+ DG +L + DLP +M S +MK I GA ++L KP+ ++LKN WQHV
Sbjct: 74 GNSDG--VLRFLESAKDLPTIMTSNIHSLSTMMKCIALGAVEFLQKPLSDDKLKNIWQHV 131
Query: 140 IRRKKVDPKDQNRS 153
+ + KD ++S
Sbjct: 132 VHKAFNTRKDVSKS 145
>gi|302834688|ref|XP_002948906.1| Myb-related transcription factor [Volvox carteri f. nagariensis]
gi|300265651|gb|EFJ49841.1| Myb-related transcription factor [Volvox carteri f. nagariensis]
Length = 2120
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 178 DDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVAS 237
D G N + ++PR++WT ELH +F+ V LG++ AVPK IL LM V+G+TRENVAS
Sbjct: 1427 DPGGSNA-ARVARRPRMLWTHELHCRFMAVVAQLGVETAVPKNILQLMAVDGMTRENVAS 1485
Query: 238 HLQKFRLSLKRL 249
HLQK+RL L+RL
Sbjct: 1486 HLQKYRLYLRRL 1497
>gi|357131277|ref|XP_003567265.1| PREDICTED: uncharacterized protein LOC100824981 [Brachypodium
distachyon]
Length = 207
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 49/60 (81%)
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
KK R+VWTTELH +F+ AV LG AVPK I+ LMNV+GLTRENVASHLQK+RL LKRL
Sbjct: 100 KKARMVWTTELHRRFVEAVAHLGEKGAVPKAIVRLMNVDGLTRENVASHLQKYRLYLKRL 159
>gi|308809964|ref|XP_003082291.1| ARR1 like protein (ISS) [Ostreococcus tauri]
gi|116060759|emb|CAL57237.1| ARR1 like protein (ISS) [Ostreococcus tauri]
Length = 205
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 49/60 (81%)
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
+K+ R+VWT LH +F+ V LG+D AVPK I+ +MNVEGLTRENVASHLQK+R++LKR
Sbjct: 73 RKRARLVWTPALHAQFVAPVEKLGVDAAVPKSIMKIMNVEGLTRENVASHLQKYRINLKR 132
>gi|226875203|gb|ACO88949.1| cytokinin B-type response regulator 6 [Vitis vinifera]
Length = 58
Score = 89.0 bits (219), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/58 (70%), Positives = 47/58 (81%)
Query: 35 CLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGFKLLELVG 92
CL ILEK LR C YEVT NRA TAL +LR N++ FD+VISDV+MPDMDGFKLLE +G
Sbjct: 1 CLMILEKMLRTCLYEVTKCNRAETALSLLRGNKSGFDIVISDVHMPDMDGFKLLEHIG 58
>gi|456359112|dbj|BAM93385.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359118|dbj|BAM93388.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 31 IRVLLVETDDSTRQVVIALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 88
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 89 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 148
Query: 138 HVIRR 142
HV RR
Sbjct: 149 HVWRR 153
>gi|351722597|ref|NP_001235202.1| timing of CAB expression 1 [Glycine max]
gi|158999372|gb|ABW87010.1| timing of CAB expression 1 [Glycine max]
Length = 558
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 80/144 (55%), Gaps = 6/144 (4%)
Query: 5 EKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLR 64
E GG S DG ID+ + R+L D+D + + L C Y+VT A + L
Sbjct: 12 ESGGKSGG-DGFIDRSKV--RILLCDNDSKSSQEVFTLLLRCSYQVTSVKSARQVIDALN 68
Query: 65 ENRNNFDLVISDVYMPDMDGFKLLELVGLEMD---LPVVMLSAYSDTKLVMKGINHGACD 121
+ D++++++ +P G K+L+ + + + +PV+M+SA + +V+K + GA D
Sbjct: 69 AEGQHIDIILAELDLPMKKGMKMLKYIARDKEFRRIPVIMMSAQDEVSIVVKCLRLGAAD 128
Query: 122 YLLKPVRMEELKNTWQHVIRRKKV 145
YL+KP+R EL N W H+ RR+++
Sbjct: 129 YLVKPLRTNELLNLWTHMWRRRRM 152
>gi|356513521|ref|XP_003525462.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 559
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 7 GGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLREN 66
G +S DG ID+ + R+L D+D + + L C Y+VT A + L
Sbjct: 22 GNNSKSGDGFIDRSKV--RILLCDNDSKSSEEVFALLLGCSYQVTSVRSARQVIDALNAE 79
Query: 67 RNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYL 123
D+++++V +P G KLL+ + + +L PV+M+SA + +V+K + GA DYL
Sbjct: 80 GQYIDIILAEVDLPIKKGMKLLKYIARDKELCRIPVIMMSAQDEVSIVVKCLRLGAADYL 139
Query: 124 LKPVRMEELKNTWQHVIRRKKV 145
+KP+R EL N W H+ RR+++
Sbjct: 140 VKPLRTNELLNLWTHMWRRRRM 161
>gi|118638626|gb|ABL09469.1| truncated pseudo-response regulator [Triticum aestivum]
gi|383215295|gb|AFG73160.1| pseudo-response regulator [Triticum aestivum]
Length = 432
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 74/125 (59%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S+++ V+ +++GA D+L KP+R ELKN W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 138 HVIRR 142
HV RR
Sbjct: 153 HVWRR 157
>gi|379025574|dbj|BAL63564.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++++M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|456359110|dbj|BAM93384.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 88
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 89 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDLMGTVLSCLSNGAADFLAKPIRKNELKNLWA 148
Query: 138 HVIRR 142
HV RR
Sbjct: 149 HVWRR 153
>gi|456359092|dbj|BAM93375.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359094|dbj|BAM93376.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359096|dbj|BAM93377.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359098|dbj|BAM93378.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359100|dbj|BAM93379.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359224|dbj|BAM93441.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++++M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|456359072|dbj|BAM93365.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359074|dbj|BAM93366.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359076|dbj|BAM93367.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359078|dbj|BAM93368.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359080|dbj|BAM93369.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359082|dbj|BAM93370.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359084|dbj|BAM93371.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359086|dbj|BAM93372.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359088|dbj|BAM93373.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 668
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++++M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|379025576|dbj|BAL63565.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025578|dbj|BAL63566.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025580|dbj|BAL63567.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025582|dbj|BAL63568.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359194|dbj|BAM93426.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359196|dbj|BAM93427.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359220|dbj|BAM93439.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359222|dbj|BAM93440.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++++M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|170172416|dbj|BAG12976.1| RHYTHM OF CHLOROPLAST 15 [Chlamydomonas reinhardtii]
Length = 631
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 47/59 (79%)
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
K+PR+VWT +LH KF AV LG DKAVPK I+ MN++GLTRENVASHLQK+R+ +R
Sbjct: 391 KRPRLVWTPQLHRKFESAVIKLGEDKAVPKTIMQEMNIDGLTRENVASHLQKYRMIKRR 449
>gi|424513385|emb|CCO66007.1| predicted protein [Bathycoccus prasinos]
Length = 738
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 44/52 (84%)
Query: 193 RVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRL 244
R+VW ELH +F+ AVN LGLD AVPK I+ +MNVEGLTRENVASHLQK+RL
Sbjct: 508 RLVWNDELHRRFMNAVNHLGLDAAVPKTIMQMMNVEGLTRENVASHLQKYRL 559
>gi|414879737|tpg|DAA56868.1| TPA: putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 304
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 51/80 (63%)
Query: 169 GEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVE 228
G + ED +KK R+ WT ELH +F+ AV LG AVPK I+ LMNVE
Sbjct: 175 GGGKSEDAASASGACRGGRAEKKARIAWTPELHNRFVAAVEHLGDKGAVPKAIVRLMNVE 234
Query: 229 GLTRENVASHLQKFRLSLKR 248
GLTRENVASHLQK+R+ LK+
Sbjct: 235 GLTRENVASHLQKYRIYLKQ 254
>gi|297796729|ref|XP_002866249.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312084|gb|EFH42508.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 445
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 162 RKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLL-GLDKAVPKK 220
+K+ + D + ++EDG + H S T+ K R VWT ELH KF+ AV L G+DKA P++
Sbjct: 18 KKQNEDDSDRKEEDGKGNEHNGMESCTRMK-RTVWTVELHQKFVNAVQQLGGVDKASPEQ 76
Query: 221 ILDLMNVEGLTRENVASHLQKFRLSLKRL 249
I LMNVEGL NVASHLQK+RL LK++
Sbjct: 77 IHALMNVEGLPVINVASHLQKYRLYLKKI 105
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLG-LDKAVPKKILDLMNVEGLTRENVASHLQKF 242
E+ T + RVVW+ ELH KF+ A++ LG DKA+PKKIL +MNVEGLTR NVA+HLQK+
Sbjct: 333 ESRTRKNHGRVVWSHELHQKFLHAIDQLGGNDKAIPKKILAVMNVEGLTRLNVATHLQKY 392
Query: 243 R 243
R
Sbjct: 393 R 393
>gi|125529286|gb|EAY77400.1| hypothetical protein OsI_05389 [Oryza sativa Indica Group]
Length = 238
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 49/62 (79%)
Query: 188 TQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLK 247
+ K+ R+VWT +LH +F+ V LG+ AVPK I+ LMNVEGLTRENVASHLQK+RL +K
Sbjct: 115 SSKRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVK 174
Query: 248 RL 249
R+
Sbjct: 175 RM 176
>gi|46371870|gb|AAS90600.1| induced protein MgI1 [Oryza sativa Japonica Group]
Length = 238
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 49/62 (79%)
Query: 188 TQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLK 247
+ K+ R+VWT +LH +F+ V LG+ AVPK I+ LMNVEGLTRENVASHLQK+RL +K
Sbjct: 115 SSKRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVK 174
Query: 248 RL 249
R+
Sbjct: 175 RM 176
>gi|159487405|ref|XP_001701713.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280932|gb|EDP06688.1| predicted protein [Chlamydomonas reinhardtii]
Length = 61
Score = 88.6 bits (218), Expect = 8e-15, Method: Composition-based stats.
Identities = 40/59 (67%), Positives = 48/59 (81%)
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
KKPR+ W+ ELH +F+ A+ LG+ AVPK IL LMNVEGLTRENVASHLQK+R+ LKR
Sbjct: 3 KKPRINWSQELHARFLNAMFQLGIKNAVPKTILQLMNVEGLTRENVASHLQKYRILLKR 61
>gi|395759127|dbj|BAM31260.1| pseudo-response regulator [Triticum aestivum]
Length = 469
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 89
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 90 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 149
Query: 138 HVIRR 142
HV RR
Sbjct: 150 HVWRR 154
>gi|159154677|gb|ABW93666.1| pseudo-response regulator [Triticum turgidum]
gi|159154679|gb|ABW93667.1| pseudo-response regulator [Triticum turgidum]
gi|159154681|gb|ABW93668.1| pseudo-response regulator [Triticum turgidum]
gi|379025480|dbj|BAL63517.1| pseudo-response regulator [Triticum turanicum]
gi|379025484|dbj|BAL63519.1| pseudo-response regulator [Triticum turanicum]
gi|379025486|dbj|BAL63520.1| pseudo-response regulator [Triticum turanicum]
gi|379025566|dbj|BAL63560.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025644|dbj|BAL63599.1| pseudo-response regulator [Triticum durum]
gi|379025646|dbj|BAL63600.1| pseudo-response regulator [Triticum durum]
gi|379025648|dbj|BAL63601.1| pseudo-response regulator [Triticum durum]
gi|379025650|dbj|BAL63602.1| pseudo-response regulator [Triticum durum]
gi|379025652|dbj|BAL63603.1| pseudo-response regulator [Triticum durum]
gi|379025654|dbj|BAL63604.1| pseudo-response regulator [Triticum durum]
gi|379025656|dbj|BAL63605.1| pseudo-response regulator [Triticum durum]
gi|379025658|dbj|BAL63606.1| pseudo-response regulator [Triticum durum]
gi|379025660|dbj|BAL63607.1| pseudo-response regulator [Triticum durum]
gi|379025662|dbj|BAL63608.1| pseudo-response regulator [Triticum durum]
gi|379025664|dbj|BAL63609.1| pseudo-response regulator [Triticum durum]
gi|379025666|dbj|BAL63610.1| pseudo-response regulator [Triticum durum]
gi|379025668|dbj|BAL63611.1| pseudo-response regulator [Triticum durum]
gi|379025670|dbj|BAL63612.1| pseudo-response regulator [Triticum durum]
gi|379025672|dbj|BAL63613.1| pseudo-response regulator [Triticum durum]
gi|379025674|dbj|BAL63614.1| pseudo-response regulator [Triticum durum]
gi|379025676|dbj|BAL63615.1| pseudo-response regulator [Triticum durum]
gi|379025678|dbj|BAL63616.1| pseudo-response regulator [Triticum durum]
gi|379025680|dbj|BAL63617.1| pseudo-response regulator [Triticum durum]
gi|379025684|dbj|BAL63619.1| pseudo-response regulator [Triticum durum]
gi|379025686|dbj|BAL63620.1| pseudo-response regulator [Triticum durum]
gi|379025688|dbj|BAL63621.1| pseudo-response regulator [Triticum durum]
gi|379025690|dbj|BAL63622.1| pseudo-response regulator [Triticum durum]
gi|379025692|dbj|BAL63623.1| pseudo-response regulator [Triticum durum]
gi|379025694|dbj|BAL63624.1| pseudo-response regulator [Triticum durum]
gi|379025696|dbj|BAL63625.1| pseudo-response regulator [Triticum durum]
gi|379026082|dbj|BAL63818.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA ++L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|449458817|ref|XP_004147143.1| PREDICTED: uncharacterized protein LOC101203501 [Cucumis sativus]
Length = 607
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
Query: 4 EEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQY-----EVTVTNRAIT 58
EE G +D + F + VL VD D LK L L + Y +T T A
Sbjct: 2 EEMGHWVTDS---LPSFAKNLHVLLVDHDPFSLKHLASLLEQQSYNGTVDHITTTQLASI 58
Query: 59 ALKMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHG 118
AL M++E + FDLV+++V MPDMD F L ++ L+M++ V+ +S+ + + K + G
Sbjct: 59 ALSMIQEKGDRFDLVMANVSMPDMDSFSFLHVL-LKMNIAVIFMSSGMNLSVATKALAEG 117
Query: 119 ACDYLLKPVRMEELKNTWQHVIR 141
AC +L KP+ +LK WQHV R
Sbjct: 118 ACYFLQKPISRGDLKYMWQHVYR 140
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 178 DDGHENENS---TTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTREN 234
D+ HE + + RVVW E KF A+N LG DK+ PK IL +MN LT
Sbjct: 250 DEDHERRKEYYIASDSRTRVVWNAERRRKFTDALNKLG-DKSRPKLILKMMNEPCLTLRQ 308
Query: 235 VASHLQKFR 243
VA+HLQK++
Sbjct: 309 VANHLQKYK 317
>gi|220030924|gb|ACL78627.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030974|gb|ACL78652.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM-PDM 82
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
G LL + + D+PV+M+S++ V+ +++GA D+L KP+R ELKN W HV
Sbjct: 103 SGIDLLSRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|456359250|dbj|BAM93454.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359252|dbj|BAM93455.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359254|dbj|BAM93456.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359256|dbj|BAM93457.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359258|dbj|BAM93458.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
Length = 331
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 93
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 94 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 153
Query: 138 HVIRR 142
HV RR
Sbjct: 154 HVWRR 158
>gi|222631501|gb|EEE63633.1| hypothetical protein OsJ_18450 [Oryza sativa Japonica Group]
Length = 633
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 19 KFPIG-----MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLREN-RNNFDL 72
K P G + VL VDDD L+ L+ L Y VT A ALK + +N + F +
Sbjct: 13 KLPAGGFFGRLHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDYFHI 72
Query: 73 VISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEEL 132
V++DV+M MDGF LL + +PV+M S D +VM+ + +GACDY++KP+ E +
Sbjct: 73 VMTDVHMSGMDGFDLLHRINGR--VPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTSEAI 130
Query: 133 KNTWQHVIRRK 143
K W+HV+R +
Sbjct: 131 KFIWKHVLRWR 141
>gi|46981318|gb|AAT07636.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51038102|gb|AAT93905.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215769096|dbj|BAH01325.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 620
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 19 KFPIG-----MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLREN-RNNFDL 72
K P G + VL VDDD L+ L+ L Y VT A ALK + +N + F +
Sbjct: 13 KLPAGGFFGRLHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDYFHI 72
Query: 73 VISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEEL 132
V++DV+M MDGF LL + +PV+M S D +VM+ + +GACDY++KP+ E +
Sbjct: 73 VMTDVHMSGMDGFDLLHRINGR--VPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTSEAI 130
Query: 133 KNTWQHVIRRK 143
K W+HV+R +
Sbjct: 131 KFIWKHVLRWR 141
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 178 DDGHENENSTTQKKP---RVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGL--TR 232
D G N +TT +K R WTT HT F+ A L D+ PKKI LM ++G+ T+
Sbjct: 248 DRGSNNLEATTGRKKVRTRFTWTTVSHTSFVRAYEQL-KDQEGPKKIKQLMELDGIFVTK 306
Query: 233 ENVASHLQKFRLSLK 247
V+SHLQK+R L+
Sbjct: 307 TQVSSHLQKYRSWLE 321
>gi|345303921|ref|YP_004825823.1| two component, sigma54 specific, Fis family transcriptional
regulator [Rhodothermus marinus SG0.5JP17-172]
gi|345113154|gb|AEN73986.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodothermus marinus SG0.5JP17-172]
Length = 476
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDD+ + E+ +T A+ AL++L++ + FDLVI+D MPDMDG
Sbjct: 14 ILLVDDEHLLHTLFERLFTRHGMRLTSCYNALQALEVLKKEADAFDLVITDFKMPDMDGL 73
Query: 86 KLLELVGLEM-DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI-RRK 143
+LL + E DL V+M++A+++ + ++ + +GA DY+ KP EEL Q + RR+
Sbjct: 74 ELLAYIRQEHPDLQVIMITAHANVQHAVRAMQNGAIDYIPKPFSTEELVERVQAALARRR 133
Query: 144 KVDPKDQNRSPHEFEKSYRK 163
K + NR+P K RK
Sbjct: 134 KQQEEVNNRTPARLAKRRRK 153
>gi|15241429|ref|NP_199232.1| protein GOLDEN2-like 2 [Arabidopsis thaliana]
gi|75333752|sp|Q9FFH0.1|GLK2_ARATH RecName: Full=Transcription activator GLK2; AltName: Full=GBF'S
PRO-RICH REGION-INTERACTING factor 2; AltName:
Full=Golden2-like protein 2; Short=AtGLK2
gi|9759520|dbj|BAB10986.1| unnamed protein product [Arabidopsis thaliana]
gi|13311005|gb|AAK16744.1| golden2-like transcription factor [Arabidopsis thaliana]
gi|13432090|gb|AAK20121.1| golden2-like protein 2 [Arabidopsis thaliana]
gi|17221601|dbj|BAB78467.1| GPRI2 [Arabidopsis thaliana]
gi|332007689|gb|AED95072.1| protein GOLDEN2-like 2 [Arabidopsis thaliana]
Length = 386
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
+KKP+V WT ELH KF+ AV LG+DKAVP +IL++MNV+ LTR NVASHLQK+R K
Sbjct: 145 KKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKH 204
Query: 249 LGNKTLEAG 257
L + EA
Sbjct: 205 LLAREAEAA 213
>gi|379025846|dbj|BAL63700.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025848|dbj|BAL63701.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+ A L++ ++N DLV+++V+M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQFIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 138 HVIRR 142
HV RR
Sbjct: 153 HVWRR 157
>gi|115442515|ref|NP_001045537.1| Os01g0971800 [Oryza sativa Japonica Group]
gi|15289981|dbj|BAB63676.1| induced protein MgI1 [Oryza sativa Japonica Group]
gi|71067054|dbj|BAE16279.1| putative transcription factor [Oryza sativa Japonica Group]
gi|113535068|dbj|BAF07451.1| Os01g0971800 [Oryza sativa Japonica Group]
gi|125573476|gb|EAZ14991.1| hypothetical protein OsJ_04927 [Oryza sativa Japonica Group]
Length = 238
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 48/60 (80%)
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
K+ R+VWT +LH +F+ V LG+ AVPK I+ LMNVEGLTRENVASHLQK+RL +KR+
Sbjct: 117 KRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRM 176
>gi|15215715|gb|AAK91403.1| AT5g44190/MLN1_11 [Arabidopsis thaliana]
gi|21700809|gb|AAM70528.1| AT5g44190/MLN1_11 [Arabidopsis thaliana]
Length = 314
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
+KKP+V WT ELH KF+ AV LG+DKAVP +IL++MNV+ LTR NVASHLQK+R K
Sbjct: 145 KKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKH 204
Query: 249 LGNKTLEAG 257
L + EA
Sbjct: 205 LLAREAEAA 213
>gi|297794987|ref|XP_002865378.1| hypothetical protein ARALYDRAFT_494575 [Arabidopsis lyrata subsp.
lyrata]
gi|297311213|gb|EFH41637.1| hypothetical protein ARALYDRAFT_494575 [Arabidopsis lyrata subsp.
lyrata]
Length = 368
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
+KKP+V WT ELH KF+ AV LG+DKAVP +IL++MNV+ LTR NVASHLQK+R K
Sbjct: 127 KKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKH 186
Query: 249 LGNKTLEAG 257
L + EA
Sbjct: 187 LLAREAEAA 195
>gi|125552239|gb|EAY97948.1| hypothetical protein OsI_19866 [Oryza sativa Indica Group]
Length = 604
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 19 KFPIG-----MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLREN-RNNFDL 72
K P G + VL VDDD L+ L+ L Y VT A ALK + +N + F +
Sbjct: 13 KLPAGGFFGRLHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDYFHI 72
Query: 73 VISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEEL 132
V++DV+M MDGF LL + +PV+M S D +VM+ + +GACDY++KP+ E +
Sbjct: 73 VMTDVHMSGMDGFDLLHRINGR--VPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTSEAI 130
Query: 133 KNTWQHVIRRK 143
K W+HV+R +
Sbjct: 131 KFIWKHVLRWR 141
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 178 DDGHENENSTTQKKP---RVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGL--TR 232
D G N +TT +K R WTT HT F+ A L D+ PKKI LM ++G+ T+
Sbjct: 248 DRGSNNLEATTGRKKVRTRFTWTTVSHTSFVRAYEQLK-DQEGPKKIKQLMELDGIFVTK 306
Query: 233 ENVASHLQKFRLSLK 247
V+SHLQK+R L+
Sbjct: 307 TQVSSHLQKYRSWLE 321
>gi|449503419|ref|XP_004161993.1| PREDICTED: uncharacterized protein LOC101230585 [Cucumis sativus]
Length = 557
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
Query: 4 EEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQY-----EVTVTNRAIT 58
EE G +D + F + VL VD D LK L L + Y +T T A
Sbjct: 2 EEMGHWVTDS---LPSFAKNLHVLLVDHDPFSLKHLASLLEQQSYNGTVDHITTTQLASI 58
Query: 59 ALKMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHG 118
AL M++E + FDLV+++V MPDMD F L ++ L+M++ V+ +S+ + + K + G
Sbjct: 59 ALSMIQEKGDRFDLVMANVSMPDMDSFSFLHVL-LKMNIAVIFMSSGMNLSVATKALAEG 117
Query: 119 ACDYLLKPVRMEELKNTWQHVIR 141
AC +L KP+ +LK WQHV R
Sbjct: 118 ACYFLQKPISRGDLKYMWQHVYR 140
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 178 DDGHENENS---TTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTREN 234
D+ HE + + RVVW E KF A+N LG DK+ PK IL +MN LT
Sbjct: 250 DEDHERRKEYYIASDSRTRVVWNAERRRKFTDALNKLG-DKSRPKLILKMMNEPCLTLRQ 308
Query: 235 VASHLQKFR 243
VA+HLQK++
Sbjct: 309 VANHLQKYK 317
>gi|255547335|ref|XP_002514725.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223546329|gb|EEF47831.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 550
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
M +E S +G+ID+ + R+L D+D + + L +C Y+VT A +
Sbjct: 1 MEGKEPNKSGGGGEGLIDRSKV--RILLCDNDSKSSEEVFTLLLKCSYQVTSVRSARQVI 58
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINH 117
L + D+++S+V +P G K+L+ + + +L PV+M+SA + +V+K +
Sbjct: 59 DALNAEGPDIDIILSEVDLPMNKGMKMLKYITRDKELRRIPVIMMSAQDEVSIVVKCLRL 118
Query: 118 GACDYLLKPVRMEELKNTWQHVIRRKKV 145
GA DYL+KP+R EL N W H+ RR+++
Sbjct: 119 GAADYLVKPLRTNELLNLWTHMWRRRRM 146
>gi|118638618|gb|ABL09465.1| pseudo-response regulator [Triticum aestivum]
gi|379025584|dbj|BAL63569.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025586|dbj|BAL63570.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025588|dbj|BAL63571.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025590|dbj|BAL63572.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025592|dbj|BAL63573.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025594|dbj|BAL63574.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025596|dbj|BAL63575.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025598|dbj|BAL63576.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025600|dbj|BAL63577.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025602|dbj|BAL63578.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025604|dbj|BAL63579.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025606|dbj|BAL63580.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025608|dbj|BAL63581.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025610|dbj|BAL63582.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025612|dbj|BAL63583.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025614|dbj|BAL63584.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025616|dbj|BAL63585.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025618|dbj|BAL63586.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025620|dbj|BAL63587.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025632|dbj|BAL63593.1| pseudo-response regulator [Triticum durum]
gi|379025634|dbj|BAL63594.1| pseudo-response regulator [Triticum durum]
gi|379025636|dbj|BAL63595.1| pseudo-response regulator [Triticum durum]
gi|379025640|dbj|BAL63597.1| pseudo-response regulator [Triticum durum]
gi|456359214|dbj|BAM93436.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359216|dbj|BAM93437.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 266
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|422898326|dbj|BAM67029.1| timing of cab expression 1-like [Chrysanthemum seticuspe f.
boreale]
Length = 562
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 14 DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLV 73
+G ID+ + R+L D+D + L +C Y+VT + L + D++
Sbjct: 12 EGFIDRSKV--RILLCDNDMKSSVEVYDLLSKCSYQVTPVRSPRQVIDALNVEGPDIDII 69
Query: 74 ISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRME 130
+S+V +P GFK+L+ + + DL PV+M+SA + +V+K + GA DYL+KP+R
Sbjct: 70 LSEVDLPMAKGFKMLKYIMRDKDLRRIPVIMMSAQDEVAVVVKCLRLGAADYLVKPLRTN 129
Query: 131 ELKNTWQHVIRRKKV 145
EL N W H+ RR+++
Sbjct: 130 ELLNLWTHMWRRRRM 144
>gi|281308392|gb|ADA58344.1| pseudo-response regulator 1b [Brassica rapa]
Length = 509
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
+ E KGG DG ID+ + R+L D+D L + L +C Y+VT A +
Sbjct: 3 LNGECKGG-----DGFIDRSRV--RILLCDNDSKSLGDVFTLLSQCSYQVTSVKSARQVI 55
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINH 117
L + D++++++ +P G K+L + + DL PV+M+S + +V+K +
Sbjct: 56 DALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKL 115
Query: 118 GACDYLLKPVRMEELKNTWQHVIRRKKV 145
GA DYL+KP+R EL N W ++ RR+++
Sbjct: 116 GAADYLVKPLRTNELLNLWTYMWRRRRM 143
>gi|403374229|gb|EJY87054.1| Protein kinase domain containing protein [Oxytricha trifallax]
Length = 834
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L +D+Q L L C YEVT AL LR+ FDLV+ D+YMP+MDGF
Sbjct: 9 ILLAEDEQFQRLALYDILELCDYEVTTVENGKKALVELRDETREFDLVLLDLYMPEMDGF 68
Query: 86 KLLELVGLEMD---LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
+LL L+ + LPVV++SA D ++ + GA DYL+KPVR +E K +H+
Sbjct: 69 ELLTLMQEDEKLSLLPVVVMSADGDKDIIANCLRMGAKDYLVKPVRFQECKGLVRHM 125
>gi|115441007|ref|NP_001044783.1| Os01g0844900 [Oryza sativa Japonica Group]
gi|113534314|dbj|BAF06697.1| Os01g0844900 [Oryza sativa Japonica Group]
gi|218189362|gb|EEC71789.1| hypothetical protein OsI_04411 [Oryza sativa Indica Group]
gi|222619526|gb|EEE55658.1| hypothetical protein OsJ_04055 [Oryza sativa Japonica Group]
Length = 219
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 47/59 (79%)
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
KK R+VWT ELH +F+ AV LG AVPK I+ LMNV+GLTRENVASHLQK+RL LKR
Sbjct: 105 KKARMVWTPELHHRFVEAVAHLGEKGAVPKAIVRLMNVDGLTRENVASHLQKYRLYLKR 163
>gi|356565113|ref|XP_003550789.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 565
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 77/142 (54%), Gaps = 5/142 (3%)
Query: 7 GGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLREN 66
G +S DG ID+ + R+L D+D + + L C Y+V A + L
Sbjct: 22 GNNSKSGDGFIDRSKV--RILLCDNDSKSSEEVFTLLLGCSYQVISVRSARQVIDALNAE 79
Query: 67 RNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYL 123
D+++++V +P G KLL+ + + +L PV+M+SA + +V+K + GA DYL
Sbjct: 80 GQYIDMILAEVDLPIKKGMKLLKYIARDKELCRIPVIMMSAQDEVSIVVKCLRLGAADYL 139
Query: 124 LKPVRMEELKNTWQHVIRRKKV 145
+KP+R EL N W H+ RR+++
Sbjct: 140 VKPLRTNELLNLWTHMWRRRRM 161
>gi|290973017|ref|XP_002669246.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
gi|284082791|gb|EFC36502.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
Length = 842
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
+VL VDDD+ ++L K L + ++V AL++LRE NN+ L++ DV MPDMDG
Sbjct: 91 KVLVVDDDRVARQVLTKLLEQLGFQVKAVEGGKQALEVLREEGNNYHLLLVDVLMPDMDG 150
Query: 85 FKLLELV--GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKN----TWQH 138
+LL++ D+P++M+S+ D + + GA D+L KPV++E LK +
Sbjct: 151 LQLLKIFRQAYSEDMPIIMVSSSEDPDTINQCFQSGAEDFLQKPVQLEILKRRVNMCLED 210
Query: 139 VIRRKK 144
+RR+K
Sbjct: 211 RLRRRK 216
>gi|449486993|ref|XP_004157464.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR1-like [Cucumis sativus]
Length = 557
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 8 GSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENR 67
G + DG ID+ + R+L D+D + + K L +C Y+V + A + L
Sbjct: 18 GGKNXGDGFIDRSKV--RILLCDNDSKSSEEVFKLLLKCSYQVISVSSARQVIDALNAEG 75
Query: 68 NNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLL 124
D+++S+V +P G K+L+ + + +L PV+M+S + +V+K + GA DYL+
Sbjct: 76 PEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKCLRLGAADYLV 135
Query: 125 KPVRMEELKNTWQHVIRRKKV 145
KP+R EL N W H+ RR++
Sbjct: 136 KPLRTNELLNLWTHMWRRRRT 156
>gi|34499879|gb|AAQ73525.1| timing of CAB expression 1 [Mesembryanthemum crystallinum]
Length = 544
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 80/146 (54%), Gaps = 7/146 (4%)
Query: 5 EKGGSSSDE--DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKM 62
++GG S+ D ID+ + R+L D+D + + L C Y+VT A +
Sbjct: 10 DEGGPSNARGSDPFIDRSKV--RILLCDNDSKSCEEVFGLLSNCSYQVTAVRSARQVIDA 67
Query: 63 LRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGA 119
L + D+++S+V +P G K+L+ + + DL PV+M+S + LV+K + GA
Sbjct: 68 LNAEGPDIDIILSEVDLPTKKGLKMLKYIMRDRDLQRIPVIMMSTQDEVSLVVKCLRLGA 127
Query: 120 CDYLLKPVRMEELKNTWQHVIRRKKV 145
DYL+KP+R E+ N W H+ RR+++
Sbjct: 128 ADYLVKPLRTNEMLNLWTHMWRRRQM 153
>gi|357482307|ref|XP_003611439.1| Two-component response regulator-like protein [Medicago truncatula]
gi|355512774|gb|AES94397.1| Two-component response regulator-like protein [Medicago truncatula]
Length = 543
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 51/66 (77%)
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFR 243
EN +KK +V WT ELH KF+ AV LG+D+A+P +IL+LM V+GLTR NVASHLQK+R
Sbjct: 304 ENKANRKKMKVDWTAELHKKFVKAVEQLGIDQAIPSRILELMKVDGLTRHNVASHLQKYR 363
Query: 244 LSLKRL 249
+ +++
Sbjct: 364 MHKRQI 369
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 9 SSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRN 68
+++D G D FP G+RVL ++ D + L Y V+ AL + +
Sbjct: 4 TANDLQGWKD-FPKGLRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPK 62
Query: 69 NFDLVISDVYMPDMDG-FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPV 127
F + I +V + DG FK LE DLP +M S +MK I GA ++L KP+
Sbjct: 63 CFHVAIVEVSISCPDGGFKFLENAK---DLPTIMTSNSQCINTMMKCIALGAVEFLTKPL 119
Query: 128 RMEELKNTWQHVIRR 142
++LKN WQHV+ +
Sbjct: 120 SEDKLKNIWQHVVHK 134
>gi|225427316|ref|XP_002279150.1| PREDICTED: two-component response regulator-like APRR2 [Vitis
vinifera]
gi|297742160|emb|CBI33947.3| unnamed protein product [Vitis vinifera]
Length = 557
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
+KK +V WT ELH KF+ AV LG+D+A+P +IL+LM VEGLTR NVASHLQK+R+ +
Sbjct: 314 RKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRH 373
Query: 249 LGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSY-VPGSMIGR 307
+ K + +Y + F HS ++ L ++ L + P S +
Sbjct: 374 ILPKEDDRRWPHQRDPMQRNYYPQKPVMAFPPYHSSHT---LPAAQLYPVWGQPSSHPAQ 430
Query: 308 LNSSAGLSMHGIASSGMIKP 327
+ S+ G A S + KP
Sbjct: 431 MWSTPGYHTWQPAESWIWKP 450
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL +DDD T + L E Y V+ AL + +F + I +V
Sbjct: 14 FPKGLRVLLLDDDTTSAAEIRSKLEEMDYIVSTFCNENEALSAISSKPESFHVAIVEVST 73
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
+ FK LE DLP +M+S+ +MK I GA ++L KP+ ++L+N WQHV
Sbjct: 74 GNNGSFKFLETA---KDLPTIMISSIHCLSTMMKCIALGAVEFLRKPLSEDKLRNIWQHV 130
Query: 140 IRR 142
+ +
Sbjct: 131 VHK 133
>gi|451328694|gb|AGF37241.1| APRR2-like protein, partial [Capsicum annuum]
Length = 505
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 53/69 (76%)
Query: 187 TTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSL 246
+ +KK +V WT ELH KF+ AV LG+D+A+P +ILD+M VEGLTR N+ASHLQK+R+
Sbjct: 312 SNKKKVKVDWTPELHKKFVQAVEQLGIDQAIPSRILDVMKVEGLTRHNIASHLQKYRMHR 371
Query: 247 KRLGNKTLE 255
+++ + +E
Sbjct: 372 RQILPREVE 380
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G++VL +D+D + ++ L + Y V AL + F + I +V
Sbjct: 14 FPKGLKVLLLDEDSSSAAEMKSRLEKMDYIVYTFCNESEALSAISSKSEGFHVAIVEVSA 73
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
D DG +L+ + +LP +M S +MK I GA ++L KP+ ++LKN WQHV
Sbjct: 74 GDNDG--VLQFLESAKNLPTIMTSNIHSLSTMMKCIALGAVEFLQKPLSDDKLKNIWQHV 131
Query: 140 IRR 142
+ +
Sbjct: 132 VHK 134
>gi|356508533|ref|XP_003523010.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 560
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 14 DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLV 73
DG +D+ + R+L D+D + + L C Y+VT A + L + D++
Sbjct: 22 DGFVDRSKV--RILLCDNDSKSSQEVFTLLLRCSYQVTSVKSARQVIDALNAEGQHIDII 79
Query: 74 ISDVYMPDMDGFKLLELVGLEMD---LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRME 130
++++ +P G K+L+ + + + +PV+M+SA + +V+K + GA DYL+KP+R
Sbjct: 80 LAELDLPMKKGMKMLKYIAQDKEFRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTN 139
Query: 131 ELKNTWQHVIRRKKV 145
EL N W H+ RR+++
Sbjct: 140 ELLNLWTHMWRRRRM 154
>gi|449015491|dbj|BAM78893.1| MYB-related protein [Cyanidioschyzon merolae strain 10D]
Length = 798
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 57/73 (78%)
Query: 176 GDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENV 235
G + G ++++ +K R+VWT +LH +F+ AVNL+G+D+A+PK ++ LMNVEGLT E+V
Sbjct: 499 GAESGKLADSASIMRKRRLVWTPQLHERFVKAVNLIGVDQAMPKILVSLMNVEGLTPEHV 558
Query: 236 ASHLQKFRLSLKR 248
SHLQK+R +L+R
Sbjct: 559 KSHLQKYRRNLRR 571
>gi|379025638|dbj|BAL63596.1| pseudo-response regulator [Triticum durum]
Length = 266
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA ++L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|328952068|ref|YP_004369402.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobacca acetoxidans DSM 11109]
gi|328452392|gb|AEB08221.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobacca acetoxidans DSM 11109]
Length = 455
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 82/138 (59%), Gaps = 4/138 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDD++ L ++E L YEV + TAL++ R RN+ DLV++D+ MP M G
Sbjct: 4 ILVVDDEKNYLLVMETLLAGAGYEVFTADSGETALELTR--RNDLDLVVTDMKMPRMSGI 61
Query: 86 KLLE-LVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
+LLE L + DLPV+M++AY + ++ + GA DY+LKP + EE+ T + +
Sbjct: 62 ELLEQLKQVYPDLPVIMMTAYGTVEKAVEAMKKGAFDYILKPFKNEEILLTIAKALELRH 121
Query: 145 VDPKDQNRSPHEFEKSYR 162
+ +++ R H+ E+ +R
Sbjct: 122 LLTENR-RLRHDLEQRHR 138
>gi|328953201|ref|YP_004370535.1| multi-sensor signal transduction histidine kinase [Desulfobacca
acetoxidans DSM 11109]
gi|328453525|gb|AEB09354.1| multi-sensor signal transduction histidine kinase [Desulfobacca
acetoxidans DSM 11109]
Length = 698
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
P ++L VDD+ L+I+ K L + Y V V + + ALK L ++R +DLV+SDV MP
Sbjct: 2 PKSAKILVVDDESAVLEIIRKILVDRGYIVDVASNGLEALKFLEKSR--YDLVLSDVKMP 59
Query: 81 DMDGFKLLELVGLEM-DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
++DG +LL+ +GL DL VMLSA++ + + I GA DY+ KPV E+L + +
Sbjct: 60 EIDGLELLQQIGLLYPDLTTVMLSAFATIRDAVAAIKLGAFDYIAKPVYPEDLLYSIERA 119
Query: 140 IR 141
++
Sbjct: 120 LK 121
>gi|295913129|gb|ADG57826.1| transcription factor [Lycoris longituba]
Length = 207
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 52/65 (80%)
Query: 185 NSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRL 244
N +++K +V WT +LH KF+ AV LG+D+A+P KIL+LMNVEGLTR N+ASHLQK+R+
Sbjct: 40 NKNSRRKMKVDWTPDLHRKFVQAVEQLGIDQAIPSKILELMNVEGLTRHNIASHLQKYRM 99
Query: 245 SLKRL 249
+ + +
Sbjct: 100 NRRPI 104
>gi|325910794|dbj|BAJ83827.1| circadian response regulator 1b [Physcomitrella patens subsp.
patens]
Length = 701
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Query: 62 MLRENRNNFDLVISDVYMPDMDGFKLL-ELVGLEM--DLPVVMLSAYSDTKLVMKGINHG 118
ML + +NFDLV++DV MP + G LL +++ E +P+V++S+Y +V + I+ G
Sbjct: 1 MLEDANSNFDLVLTDVVMPCLSGVGLLSKMMKREACKRVPIVIMSSYDSLDIVFRCISKG 60
Query: 119 ACDYLLKPVRMEELKNTWQHVIRR 142
ACDYL+KPVR EL+N WQHV R+
Sbjct: 61 ACDYLVKPVRKNELRNLWQHVWRK 84
>gi|302143340|emb|CBI21901.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Query: 172 EDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLT 231
E E G +++N ++K +V WT ELH +F+ AV LG+DKAVP +IL++M ++ LT
Sbjct: 75 EVEKGRKSSAQSKNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLT 134
Query: 232 RENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGG 280
R N+ASHLQK+R K L + EA AS K Y G G GG
Sbjct: 135 RHNIASHLQKYRSHRKHLLAREAEA---ASWSQKRQMY---GVAAGGGG 177
>gi|153004853|ref|YP_001379178.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
gi|152028426|gb|ABS26194.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
Length = 357
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 8/141 (5%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+L VDDD + ++ L E Y VT + A AL R +F LVISDV MP DG
Sbjct: 10 RILIVDDDTSVRDVIAVLLGEEGYAVTAVSSAEAALDAAR--LTDFSLVISDVRMPGKDG 67
Query: 85 FKLLELVG-LEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK 143
F LLE V L D V+ML+A+ DT+ ++ + +GA DYLLKP ++ +L + + R+
Sbjct: 68 FWLLERVRELHPDTAVIMLTAFGDTEAAVECLRNGAADYLLKPPKVTDLIRAIERALGRR 127
Query: 144 KVDPKDQNRSPHEFEKSYRKR 164
+++ + H + +S R
Sbjct: 128 RLE-----LARHRYRRSLENR 143
>gi|281308382|gb|ADA58339.1| pseudo-response regulator 1a [Brassica rapa]
Length = 576
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L D+D L + L +C Y+VT A + L + D++++++ +P
Sbjct: 21 VRILLCDNDPNSLGEVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAK 80
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G K+L + + DL PV+M+S + +V+K + GA DYL+KP+R EL N W H+
Sbjct: 81 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMW 140
Query: 141 RRKKV 145
RR+++
Sbjct: 141 RRRRM 145
>gi|449490377|ref|XP_004158587.1| PREDICTED: transcription activator GLK1-like [Cucumis sativus]
Length = 453
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 54/76 (71%)
Query: 182 ENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQK 241
+++NS ++K +V WT ELH +F+ AV LG+DKAVP +IL+LM +E LTR NVASHLQK
Sbjct: 160 QSKNSQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIECLTRHNVASHLQK 219
Query: 242 FRLSLKRLGNKTLEAG 257
+R K L + EA
Sbjct: 220 YRSHRKHLLAREAEAA 235
>gi|85860540|ref|YP_462742.1| sigma-54-dependent transcriptional regulator [Syntrophus
aciditrophicus SB]
gi|85723631|gb|ABC78574.1| sigma-54-dependent transcriptional regulator [Syntrophus
aciditrophicus SB]
Length = 443
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPD 81
+ +R++ +DDD + L++ LR Y+V + +A +L+ + + +DLVISD+ MPD
Sbjct: 1 MSIRIIVIDDDAVACEFLQEALRRADYDVDICT---SARDVLKGDLSRYDLVISDIRMPD 57
Query: 82 MDGFKLLELVGLEMD-LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
MDG +LL + + LPV++++AY + M+ + GA DY+ KP E ++N + V+
Sbjct: 58 MDGLQLLRRIHQQWPALPVILMTAYGSLESTMEALQLGAWDYISKPFSPEAIRNMVKKVL 117
Query: 141 RRKKVDPKDQNRSPHEFEK 159
+++ SP E E+
Sbjct: 118 GMRELQRHRSQGSPAEKEE 136
>gi|115435568|ref|NP_001042542.1| Os01g0239000 [Oryza sativa Japonica Group]
gi|75321229|sp|Q5NAN5.1|GLK2_ORYSJ RecName: Full=Probable transcription factor GLK2; AltName:
Full=Golden2-like protein 2; Short=OsGLK2
gi|56784113|dbj|BAD81484.1| putative transcription factor OsGLK2 [Oryza sativa Japonica Group]
gi|113532073|dbj|BAF04456.1| Os01g0239000 [Oryza sativa Japonica Group]
gi|215768049|dbj|BAH00278.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 539
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+NS ++K +V WT ELH +F+ AV LG+DKAVP +IL+LM +E LTR N+ASHLQK+
Sbjct: 207 GKNSHGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKY 266
Query: 243 RLSLKRLGNKTLEAG 257
R K L + EA
Sbjct: 267 RSHRKHLMAREAEAA 281
>gi|147794999|emb|CAN71929.1| hypothetical protein VITISV_001044 [Vitis vinifera]
Length = 563
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
+KK +V W ELH KF+ AV LG+D+A+P +IL+LM VEGLTR NVASHLQK+R+ +
Sbjct: 320 RKKMKVDWXPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRH 379
Query: 249 LGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSY-VPGSMIGR 307
+ K + +Y + F HS ++ L ++ L + P S +
Sbjct: 380 ILPKEDDRRWPHQRDPMQRNYYPQKPVMAFPPYHSSHT---LPAAQLYPVWGQPSSHPAQ 436
Query: 308 LNSSAGLSMHGIASSGMIKP 327
+ S+ G A S + KP
Sbjct: 437 MWSTPGYHTWQPAESWIWKP 456
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL +DDD T + L E Y V+ AL + +F + I +V
Sbjct: 14 FPKGLRVLLLDDDTTSAAEIRSKLEEMDYIVSTFCNENEALSAISSKPESFHVAIVEVST 73
Query: 80 PDMDGFKLLEL--------VGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEE 131
+ FK LE G+ L + ++ + + + GA ++L KP+ ++
Sbjct: 74 GNNGSFKFLETAKDLPTIRAGMHFLLTISLMDVFDNQMFQL-----GAVEFLRKPLSEDK 128
Query: 132 LKNTWQHVIRR 142
L+N WQHV+ +
Sbjct: 129 LRNIWQHVVHK 139
>gi|86158253|ref|YP_465038.1| response regulator receiver (CheY-like) modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774764|gb|ABC81601.1| response regulator receiver (CheY-like) modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 357
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
P R+L VDDD ++ LRE Y T A AL R + ++ LVISDV MP
Sbjct: 6 PEATRILIVDDDAAVRDVITVLLREEGYVCTTVASAEAALDEAR--KTDYPLVISDVRMP 63
Query: 81 DMDGFKLLE-LVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
DGF LLE + D V+ML+AY DT+ ++ + +GA DYLLKP ++ EL +
Sbjct: 64 ARDGFWLLEQMREASPDTAVIMLTAYGDTEAAVECLRNGAADYLLKPPKVTELIRAIERA 123
Query: 140 IRRKKVD 146
+ R++++
Sbjct: 124 LGRRRLE 130
>gi|13940500|gb|AAK50394.1|AF318582_1 putative transcription factor OsGLK2 [Oryza sativa Indica Group]
Length = 430
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 52/74 (70%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+NS ++K +V WT ELH +F+ AV LG+DKAVP +IL+LM +E LTR N+ASHLQK+
Sbjct: 98 GKNSHGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKY 157
Query: 243 RLSLKRLGNKTLEA 256
R K L + EA
Sbjct: 158 RSHRKHLMAREAEA 171
>gi|379025622|dbj|BAL63588.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025624|dbj|BAL63589.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359226|dbj|BAM93442.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 186
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+++V+M
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 95
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+M+S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 96 GLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 155
Query: 138 HVIRR 142
HV RR
Sbjct: 156 HVWRR 160
>gi|323388709|gb|ADX60159.1| pseudoARR-B transcription factor [Zea mays]
gi|413923083|gb|AFW63015.1| two-component response regulator-like PRR1 [Zea mays]
Length = 515
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 7 GGSSSDEDGV------IDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
GG D GV +D+ + R+L D D T + + + L C Y VT +
Sbjct: 3 GGGEGDRVGVGGAQQFVDRSKV--RILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVI 60
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINH 117
+L D+++++V +P FK+L+ + DL P++M+S + +V+K +
Sbjct: 61 NILNYEGGEIDIILAEVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRL 120
Query: 118 GACDYLLKPVRMEELKNTWQHVIRRKKV 145
GA +YL+KP+R EL N W HV RR+++
Sbjct: 121 GAAEYLVKPLRTNELLNLWTHVWRRRRM 148
>gi|316930963|gb|ADU60098.1| pseudo response regulator 1 [Zea mays]
Length = 515
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 7 GGSSSDEDGV------IDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
GG D GV +D+ + R+L D D T + + + L C Y VT +
Sbjct: 3 GGGEGDRVGVGGAQQFVDRSKV--RILLCDGDATSPREVLRLLCNCAYHVTCAKSPRQVI 60
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINH 117
+L D+++++V +P FK+L+ + DL P++M+S + +V+K +
Sbjct: 61 NILNYEGGEIDIILAEVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRL 120
Query: 118 GACDYLLKPVRMEELKNTWQHVIRRKKV 145
GA +YL+KP+R EL N W HV RR+++
Sbjct: 121 GAAEYLVKPLRTNELLNLWTHVWRRRRM 148
>gi|197122437|ref|YP_002134388.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. K]
gi|220917204|ref|YP_002492508.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
gi|196172286|gb|ACG73259.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. K]
gi|219955058|gb|ACL65442.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 357
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
P R+L VDDD ++ LRE Y T A AL R + ++ LVISDV MP
Sbjct: 6 PEATRILIVDDDAAVRDVITVLLREEGYVCTTVASAEAALDEAR--KTDYPLVISDVRMP 63
Query: 81 DMDGFKLLE-LVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
DGF LLE + D V+ML+AY DT+ ++ + +GA DYLLKP ++ EL +
Sbjct: 64 ARDGFWLLEQMREASPDTAVIMLTAYGDTEAAVECLRNGAADYLLKPPKVTELIRAIERA 123
Query: 140 IRRKKVD 146
+ R++++
Sbjct: 124 LGRRRLE 130
>gi|312281707|dbj|BAJ33719.1| unnamed protein product [Thellungiella halophila]
Length = 392
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 52/73 (71%)
Query: 185 NSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRL 244
N+ +KK +V WT +LH KF+ AV LG+DKAVP +IL++MNV+ LTR NVASHLQK+R
Sbjct: 138 NNEIKKKTKVDWTPDLHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRS 197
Query: 245 SLKRLGNKTLEAG 257
K L + EA
Sbjct: 198 HRKHLLAREAEAA 210
>gi|379025904|dbj|BAL63729.1| pseudo-response regulator [Triticum turanicum]
gi|379025906|dbj|BAL63730.1| pseudo-response regulator [Triticum turanicum]
gi|379025908|dbj|BAL63731.1| pseudo-response regulator [Triticum polonicum]
Length = 665
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 8/125 (6%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +++ LR C Y+ A L++ ++N DLV+++V+M
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQGLPAENGHQAWAYLQDMQSNIDLVLTEVFM--HG 92
Query: 84 GFKLLELVGLEM------DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
G ++L+G M D+PV+ +S++ V+ +++GA D+L KP+R ELKN W
Sbjct: 93 GLSGIDLLGRIMNHEVCKDIPVISMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWA 152
Query: 138 HVIRR 142
HV RR
Sbjct: 153 HVWRR 157
>gi|375126877|gb|AFA35965.1| timing of cab expression 1/pseudo-response regulator 1 [Nicotiana
attenuata]
Length = 551
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 14 DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLV 73
+G ID+ + R+L D D + + L +C Y+VT + L D++
Sbjct: 11 EGFIDRSKV--RILLCDKDAKSSQEVFTLLCKCSYQVTSARSPRQVIDALNAEGPEIDII 68
Query: 74 ISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRME 130
+S+V +P G+K+L+ + + +L PV+M+SA + +V+K + GA DYL+KP+R
Sbjct: 69 LSEVDLPMSKGYKMLKYIMRDKELRRIPVIMMSAQDEVSIVVKCLKFGAADYLVKPLRTN 128
Query: 131 ELKNTWQHVIRRKKV 145
EL N W H+ RR+++
Sbjct: 129 ELLNLWTHMWRRRQM 143
>gi|226532758|ref|NP_001147823.1| LOC100281433 [Zea mays]
gi|195613968|gb|ACG28814.1| two-component response regulator-like PRR1 [Zea mays]
Length = 515
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 7 GGSSSDEDGV------IDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
GG D GV +D+ + R+L D D T + + + L C Y VT +
Sbjct: 3 GGGEGDRVGVGGAQQFVDRSKV--RILLCDGDATSSREVLRLLCNCAYHVTCAKSPRQVV 60
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINH 117
+L D+++++V +P FK+L+ + DL P++M+S + +V+K +
Sbjct: 61 NILNYEGGEIDIILAEVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRL 120
Query: 118 GACDYLLKPVRMEELKNTWQHVIRRKKV 145
GA +YL+KP+R EL N W HV RR+++
Sbjct: 121 GAAEYLVKPLRTNELLNLWTHVWRRRRM 148
>gi|317130175|ref|YP_004096457.1| winged helix family two component transcriptional regulator
[Bacillus cellulosilyticus DSM 2522]
gi|315475123|gb|ADU31726.1| two component transcriptional regulator, winged helix family
[Bacillus cellulosilyticus DSM 2522]
Length = 230
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 77/122 (63%), Gaps = 4/122 (3%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++L VDD+Q K+L+ +++ + A L+ NN+DL+I D+ MP++DG
Sbjct: 4 KILLVDDEQEMRKLLKVCFSASPFQLDEASNGDEAF--LKVQENNYDLIILDIMMPEIDG 61
Query: 85 FKLLELVGLEMD--LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
F+LL ++ +E+D +PV++L+A DT+ V++G+ GA DY++KP +EL + V+RR
Sbjct: 62 FELLNMLRVELDTEIPVILLTALGDTERVVEGLKRGADDYVVKPFEPKELVARVESVLRR 121
Query: 143 KK 144
K
Sbjct: 122 SK 123
>gi|357150179|ref|XP_003575369.1| PREDICTED: two-component response regulator-like PRR1-like
[Brachypodium distachyon]
Length = 521
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L D D + + + LR C Y+VT + +L D+++++V +P
Sbjct: 33 VRILLCDSDPDSSRDVLRLLRNCSYQVTCAKSPRQVINVLNCEGAEMDIILAEVDLPVSK 92
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
FK+L+ + +L P++M+S + +V+K + GA +YL+KP+RM EL N W HV
Sbjct: 93 CFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 152
Query: 141 RRKKV 145
RR+++
Sbjct: 153 RRRRM 157
>gi|350566097|ref|ZP_08934797.1| DNA-binding response regulator [Peptoniphilus indolicus ATCC 29427]
gi|348663121|gb|EGY79734.1| DNA-binding response regulator [Peptoniphilus indolicus ATCC 29427]
Length = 232
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
++ +DDD +++K L Y V + N + K +R N NN L++ D+ +PD DGF
Sbjct: 4 IIIIDDDVVLCNLIKKCLSTDGYYVDIANNGLEGYKKIR-NSNNLCLILLDIMLPDFDGF 62
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR-KK 144
++LE++ E +PV+ML+A SD + G+ GA DYL KP + ELK + ++RR
Sbjct: 63 QVLEMIREEYTVPVLMLTAKSDDDSKIYGLKQGADDYLTKPFNINELKARVEAMVRRFTD 122
Query: 145 VDPKDQNRS 153
+ K+ NRS
Sbjct: 123 FNQKNINRS 131
>gi|357124552|ref|XP_003563963.1| PREDICTED: probable transcription factor GLK1-like [Brachypodium
distachyon]
Length = 474
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 52/75 (69%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+NS +KK +V WT ELH +F+ AV LG+DKAVP +IL++M ++ LTR N+ASHLQK+
Sbjct: 181 KKNSHGKKKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKY 240
Query: 243 RLSLKRLGNKTLEAG 257
R K + + EA
Sbjct: 241 RSHRKHMLAREAEAA 255
>gi|224124202|ref|XP_002330130.1| pseudo response regulator [Populus trichocarpa]
gi|222871264|gb|EEF08395.1| pseudo response regulator [Populus trichocarpa]
Length = 541
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L D+D + + L +C Y+VT A + L D+++S+V +P
Sbjct: 25 VRILLCDNDAKSSQEVFTLLLKCSYQVTSVRSARQVIDALNAEGPEIDIILSEVDIPMTK 84
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G K+L+ + + DL PV+M+SA + +V+K + GA DYL+KP+R EL N W H+
Sbjct: 85 GMKMLKYIMRDKDLRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 144
Query: 141 RRK 143
RR+
Sbjct: 145 RRR 147
>gi|356540587|ref|XP_003538769.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 570
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFR 243
E +KK +V WT ELH KF+ AV LG+D+A+P +IL++M VEGLTR NVASHLQK+R
Sbjct: 306 EIKANRKKVKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKYR 365
Query: 244 LSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSY-VPG 302
+ ++ + + + +Y + + HS ++ LS + + + PG
Sbjct: 366 IHKRQSAPREEDRKWHNQGDAMQRNYYMQRPIMAYPPYHSHHT---LSPAPIYPMWGQPG 422
Query: 303 SMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNT---------SFNTIGKNQQAMFPANRN 353
S +AG+ + G M P S + + Q FP N+N
Sbjct: 423 SQ------TAGVQIWGHPGYPMWHPTESWHWKPYPGVHVDAWGCPLVPPPQAPCFPYNQN 476
Query: 354 S 354
+
Sbjct: 477 T 477
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 9 SSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRN 68
+++D G D FP G+RVL ++ D + + + L Y+V+ AL L +
Sbjct: 4 TANDLQGWKD-FPKGLRVLLLEGDSSSAAEIREQLEAMDYKVSTFYDENEALSALSSSPK 62
Query: 69 NFDLVISDVYMP-DMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPV 127
F + I +V + GFK LE DLP +M S +MK I GA ++L KP+
Sbjct: 63 GFHVAIVEVSTSCSLGGFKFLENA---KDLPTIMTSKDQCLNTMMKCIALGAVEFLSKPL 119
Query: 128 RMEELKNTWQHVIRR 142
++LKN WQHV+ +
Sbjct: 120 SEDKLKNIWQHVVHK 134
>gi|381149243|gb|AFF60404.1| golden 2-like 1 transcription factor [Solanum lycopersicum]
gi|391868374|gb|AFM44934.1| golden1-like protein [Solanum lycopersicum]
Length = 464
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 62/100 (62%)
Query: 158 EKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAV 217
E+S ++R ++ D +N N ++K +V WT ELH +F+ AV LG+DKAV
Sbjct: 143 EESTQQRNQNIVTPKESDKGKKSSKNHNLPGKRKVKVDWTPELHRRFVQAVEQLGVDKAV 202
Query: 218 PKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAG 257
P +IL++M ++ LTR N+ASHLQK+R K L + +EA
Sbjct: 203 PSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREVEAA 242
>gi|146428|gb|AAA24004.1| hydG protein [Escherichia coli]
Length = 437
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ TW+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATWK 118
>gi|218191182|gb|EEC73609.1| hypothetical protein OsI_08092 [Oryza sativa Indica Group]
Length = 518
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L D D + + + + L C Y+VT + +L D+++++V +P
Sbjct: 28 VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSK 87
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
FK+L+ + +L P++M+S + +V+K + GA +YL+KP+RM EL N W HV
Sbjct: 88 CFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 147
Query: 141 RRKKV 145
RR+++
Sbjct: 148 RRRRM 152
>gi|51571875|dbj|BAD38854.1| pseudo-response regulator 1 [Oryza sativa Japonica Group]
Length = 518
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L D D + + + + L C Y+VT + +L D+++++V +P
Sbjct: 28 VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSK 87
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
FK+L+ + +L P++M+S + +V+K + GA +YL+KP+RM EL N W HV
Sbjct: 88 CFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 147
Query: 141 RRKKV 145
RR+++
Sbjct: 148 RRRRM 152
>gi|225446455|ref|XP_002275230.1| PREDICTED: transcription activator GLK1-like [Vitis vinifera]
Length = 432
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Query: 172 EDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLT 231
E E G +++N ++K +V WT ELH +F+ AV LG+DKAVP +IL++M ++ LT
Sbjct: 136 EVEKGRKSSAQSKNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLT 195
Query: 232 RENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGG 280
R N+ASHLQK+R K L + EA AS K Y G G GG
Sbjct: 196 RHNIASHLQKYRSHRKHLLAREAEA---ASWSQKRQMY---GVAAGGGG 238
>gi|115447337|ref|NP_001047448.1| Os02g0618200 [Oryza sativa Japonica Group]
gi|68565719|sp|Q689G9.2|PRR1_ORYSJ RecName: Full=Two-component response regulator-like PRR1; AltName:
Full=Pseudo-response regulator 1; Short=OsPRR1
gi|47847546|dbj|BAD21598.1| putative timing of CAB expression 1 [Oryza sativa Japonica Group]
gi|47847675|dbj|BAD21456.1| putative timing of CAB expression 1 [Oryza sativa Japonica Group]
gi|113536979|dbj|BAF09362.1| Os02g0618200 [Oryza sativa Japonica Group]
gi|222623253|gb|EEE57385.1| hypothetical protein OsJ_07546 [Oryza sativa Japonica Group]
Length = 518
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L D D + + + + L C Y+VT + +L D+++++V +P
Sbjct: 28 VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSK 87
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
FK+L+ + +L P++M+S + +V+K + GA +YL+KP+RM EL N W HV
Sbjct: 88 CFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 147
Query: 141 RRKKV 145
RR+++
Sbjct: 148 RRRRM 152
>gi|242092550|ref|XP_002436765.1| hypothetical protein SORBIDRAFT_10g008400 [Sorghum bicolor]
gi|241914988|gb|EER88132.1| hypothetical protein SORBIDRAFT_10g008400 [Sorghum bicolor]
Length = 466
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
N++S +KK +V WT +LH +F+ AV LG+DKAVP +IL++M ++ LTR N+ASHLQK+
Sbjct: 181 NKHSHGKKKAKVDWTPDLHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKY 240
Query: 243 RLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDG 277
R K + + +EA A+ + Y GA +G
Sbjct: 241 RSHRKHMLAREVEA---ATWTHRRQMYAAGGAPNG 272
>gi|242093734|ref|XP_002437357.1| hypothetical protein SORBIDRAFT_10g025490 [Sorghum bicolor]
gi|241915580|gb|EER88724.1| hypothetical protein SORBIDRAFT_10g025490 [Sorghum bicolor]
Length = 111
Score = 82.8 bits (203), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/91 (47%), Positives = 63/91 (69%), Gaps = 6/91 (6%)
Query: 19 KFPIGMRVLAVDDDQTCLKILEKFLRECQY-EVTVTNRAITALKMLRENR---NNFDLVI 74
+F G+RVLAVD+D+ L +L++ L+ C Y VT+ TAL MLRE + + FDLVI
Sbjct: 5 RFRAGLRVLAVDEDRVNLVVLKRVLKVCDYNNVTIVADVSTALDMLRERKDGDDQFDLVI 64
Query: 75 SDVYMPD--MDGFKLLELVGLEMDLPVVMLS 103
SD ++P+ ++G K LELV +EMD+PV+ +S
Sbjct: 65 SDFFIPNNGINGLKFLELVAVEMDIPVIGIS 95
>gi|297832658|ref|XP_002884211.1| hypothetical protein ARALYDRAFT_480887 [Arabidopsis lyrata subsp.
lyrata]
gi|297330051|gb|EFH60470.1| hypothetical protein ARALYDRAFT_480887 [Arabidopsis lyrata subsp.
lyrata]
Length = 412
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 61/112 (54%), Gaps = 12/112 (10%)
Query: 158 EKSYRKRKDQDGEDEDEDGDDDGHENENSTT------------QKKPRVVWTTELHTKFI 205
E+ KR D E DGD D +S+ ++K +V WT ELH +F+
Sbjct: 107 EEVVSKRDDAAAETVTYDGDSDRKRKYSSSASSKNNRISNNEGKRKVKVDWTPELHRRFV 166
Query: 206 GAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAG 257
AV LG+DKAVP +IL+LM V LTR NVASHLQK+R K L + EA
Sbjct: 167 EAVEQLGVDKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKHLLAREAEAA 218
>gi|297539092|ref|YP_003674861.1| Fis family two component sigma54 specific transcriptional regulator
[Methylotenera versatilis 301]
gi|297258439|gb|ADI30284.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylotenera versatilis 301]
Length = 456
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+LAVDD+ ++LE LR+ Y+ V AL +LR + N DLV+SD++MP MDG
Sbjct: 6 RILAVDDEPHMRRLLEISLRQAGYQPVVAENGKEALTILRND--NIDLVVSDLHMPVMDG 63
Query: 85 FKLLELVGLE-MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELK 133
KLLE + E +D PV++++A + ++ + GA DY+L+P +E L+
Sbjct: 64 LKLLEALRAENIDTPVIIVTAQGEISSAVQAMKLGASDYILRPFDLETLE 113
>gi|381149253|gb|AFF60409.1| golden 2-like 2 transcription factor [Solanum phureja]
Length = 317
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFR 243
+N ++K +V WT ELH KF+ A+ LG+DKAVP +IL+LM+ GLTR N+ASHLQK+R
Sbjct: 85 KNPQGKRKVKVDWTPELHRKFVKAIEKLGVDKAVPSRILELMSTHGLTRHNIASHLQKYR 144
Query: 244 LSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFG 279
K L + EA S+ K Y + G G
Sbjct: 145 AHRKHLLAREAEA---VSLSHKKQMYSGTAMIGGGG 177
>gi|18399397|ref|NP_565476.1| GBF's pro-rich region-interacting factor 1 [Arabidopsis thaliana]
gi|75337286|sp|Q9SIV3.2|GLK1_ARATH RecName: Full=Transcription activator GLK1; AltName: Full=GBF'S
PRO-RICH REGION-INTERACTING factor 1; AltName:
Full=Golden2-like protein 1; Short=AtGLK1
gi|13311003|gb|AAK16743.1| golden2-like transcription factor [Arabidopsis thaliana]
gi|13432088|gb|AAK20120.1| golden2-like protein 1 [Arabidopsis thaliana]
gi|15451040|gb|AAK96791.1| Unknown protein [Arabidopsis thaliana]
gi|17221599|dbj|BAB78466.1| GPRI1 [Arabidopsis thaliana]
gi|20148313|gb|AAM10047.1| unknown protein [Arabidopsis thaliana]
gi|20198041|gb|AAD21709.2| expressed protein [Arabidopsis thaliana]
gi|20198084|gb|AAM15392.1| expressed protein [Arabidopsis thaliana]
gi|330251936|gb|AEC07030.1| GBF's pro-rich region-interacting factor 1 [Arabidopsis thaliana]
Length = 420
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 61/112 (54%), Gaps = 12/112 (10%)
Query: 158 EKSYRKRKDQDGEDEDEDGDDDGHENENSTT------------QKKPRVVWTTELHTKFI 205
E+ KR D E DGD D +S+ ++K +V WT ELH +F+
Sbjct: 108 EEVVSKRDDVAAETVTYDGDSDRKRKYSSSASSKNNRISNNEGKRKVKVDWTPELHRRFV 167
Query: 206 GAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAG 257
AV LG+DKAVP +IL+LM V LTR NVASHLQK+R K L + EA
Sbjct: 168 EAVEQLGVDKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKHLLAREAEAA 219
>gi|356495556|ref|XP_003516642.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 533
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 47/61 (77%)
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFR 243
E +KK +V WT ELH KF+ AV LG+D+A+P +IL++M VEGLTR NVASHLQK+R
Sbjct: 281 EIKANRKKMKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKYR 340
Query: 244 L 244
+
Sbjct: 341 I 341
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL ++ D + + + L Y V+ AL L + F + I +V
Sbjct: 14 FPKGLRVLLLEGDSSSAAEIREQLEAVDYNVSTFYDENEALSALSSSPEGFHVAIVEVST 73
Query: 80 P-DMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
+ GFK LE DLP +M S +MK I GA ++L KP+ ++LKN WQH
Sbjct: 74 SCSLGGFKFLEN---SKDLPTIMTSKDQCLNTMMKCIALGAVEFLSKPLSEDKLKNIWQH 130
Query: 139 VIRR 142
V+ +
Sbjct: 131 VVHK 134
>gi|326522234|dbj|BAK07579.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L D D + + + L C Y+VT + +L D+++++V +P
Sbjct: 31 VRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPVSK 90
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
FK+L+ +G +L P++M+S + +V+K + GA +YL+KP+RM EL N W HV
Sbjct: 91 CFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 150
Query: 141 RRKKV 145
RR+++
Sbjct: 151 RRRRM 155
>gi|297840627|ref|XP_002888195.1| hypothetical protein ARALYDRAFT_893617 [Arabidopsis lyrata subsp.
lyrata]
gi|297334036|gb|EFH64454.1| hypothetical protein ARALYDRAFT_893617 [Arabidopsis lyrata subsp.
lyrata]
Length = 117
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 5/91 (5%)
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLG-LDKAVPKKILDLMNVEGLTRENVASHLQKF 242
E+ T + R VW+ ELH KF+ A++ LG DKA+PKKIL MNVEGLTR NVA+HLQK+
Sbjct: 15 ESRTRKNHGRFVWSHELHQKFLNAIDQLGGNDKAIPKKILADMNVEGLTRLNVATHLQKY 74
Query: 243 RLSLKRLGNKTLEAGMVASVGSKDSSYLRIG 273
RL+L+R T EA + + S+++ G
Sbjct: 75 RLTLER----TTEAQQLNMATRQVPSFIQQG 101
>gi|326531994|dbj|BAK01373.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|364285651|gb|AEW48243.1| timing of cab expression 1 [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L D D + + + L C Y+VT + +L D+++++V +P
Sbjct: 31 VRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPVSK 90
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
FK+L+ +G +L P++M+S + +V+K + GA +YL+KP+RM EL N W HV
Sbjct: 91 CFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 150
Query: 141 RRKKV 145
RR+++
Sbjct: 151 RRRRM 155
>gi|364285649|gb|AEW48242.1| timing of cab expression 1 [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L D D + + + L C Y+VT + +L D+++++V +P
Sbjct: 31 VRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPVSK 90
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
FK+L+ +G +L P++M+S + +V+K + GA +YL+KP+RM EL N W HV
Sbjct: 91 CFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 150
Query: 141 RRKKV 145
RR+++
Sbjct: 151 RRRRM 155
>gi|118722731|gb|ABL10089.1| golden 2-like protein [Triticum aestivum]
Length = 461
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 52/75 (69%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
++NS +KK +V WT ELH +F+ AV LG+DKAVP +IL++M + LTR N+ASHLQK+
Sbjct: 173 SKNSHGKKKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGINSLTRHNIASHLQKY 232
Query: 243 RLSLKRLGNKTLEAG 257
R K + + EA
Sbjct: 233 RSHRKHMIAREAEAA 247
>gi|407773846|ref|ZP_11121146.1| two component sigma-54-specific Fis family transcriptional
regulator [Thalassospira profundimaris WP0211]
gi|407283292|gb|EKF08833.1| two component sigma-54-specific Fis family transcriptional
regulator [Thalassospira profundimaris WP0211]
Length = 456
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 85/146 (58%), Gaps = 12/146 (8%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
P +R+L VDD+++ ++ L LR +VT + A +REN+ FD+++ D+ +
Sbjct: 1 MPRQIRILIVDDEESFVRSLSFALRTEGMDVTGVHSGEDAFLQVRENK--FDIILLDLRL 58
Query: 80 PDMDGFKLLELV-GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
P +G ++L+ + L++D+PV+M+SA+ DT+ +K + GA DYL KP ++EL +T
Sbjct: 59 PGANGMEVLDSIRKLDIDVPVIMISAHGDTRAAVKAVKLGAADYLSKPFELDELIHTINT 118
Query: 139 VIRRKKVDPKDQNRSPHEFEKSYRKR 164
+ DQNR+ E +RKR
Sbjct: 119 TL--------DQNRTALEL-NYHRKR 135
>gi|224095575|ref|XP_002310413.1| predicted protein [Populus trichocarpa]
gi|222853316|gb|EEE90863.1| predicted protein [Populus trichocarpa]
Length = 328
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 53/76 (69%)
Query: 182 ENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQK 241
+N N+ ++K +V WT ELH +F+ AV LG+DKAVP +IL+LM ++ LTR N+ASHLQK
Sbjct: 149 KNNNNQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQK 208
Query: 242 FRLSLKRLGNKTLEAG 257
+R K L + EA
Sbjct: 209 YRSHRKHLLAREAEAA 224
>gi|242062346|ref|XP_002452462.1| hypothetical protein SORBIDRAFT_04g026190 [Sorghum bicolor]
gi|241932293|gb|EES05438.1| hypothetical protein SORBIDRAFT_04g026190 [Sorghum bicolor]
Length = 524
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L D D T + + + L C Y VT + +L D+++++V +P
Sbjct: 34 VRILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPVSK 93
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
FK+L+ + DL P++M+S + +V+K + GA +YL+KP+R EL N W HV
Sbjct: 94 CFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVW 153
Query: 141 RRKKV 145
RR+++
Sbjct: 154 RRRRM 158
>gi|397911978|gb|AFO69282.1| pseudo-response regulator 1, partial [Hordeum vulgare]
Length = 491
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+L D D + + + L C Y+VT + +L D+++++V +P
Sbjct: 1 RILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPVSKC 60
Query: 85 FKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIR 141
FK+L+ +G +L P++M+S + +V+K + GA +YL+KP+RM EL N W HV R
Sbjct: 61 FKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWR 120
Query: 142 RKKV 145
R+++
Sbjct: 121 RRRM 124
>gi|206891080|ref|YP_002248567.1| FrgC [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206743018|gb|ACI22075.1| FrgC [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 139
Score = 82.0 bits (201), Expect = 6e-13, Method: Composition-based stats.
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 10/129 (7%)
Query: 25 RVLAVDDDQTCLKILEKFLRE-CQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++L VDD+ LK+L LRE YE+T TN I A+++ + + +FDLVI+D+ MP +D
Sbjct: 4 KILIVDDEPDMLKLLSMILREKTPYEITTTNNPIEAVELAK--KGDFDLVITDLKMPGLD 61
Query: 84 GFKLLELVG-LEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT------W 136
G +LLE V + D+PV++++AY + I G D++ KP + E++ T W
Sbjct: 62 GLQLLEEVKKRDEDVPVIIITAYGTIDAATEAIEKGGFDFITKPFKKEQILFTIEKALKW 121
Query: 137 QHVIRRKKV 145
V R K+
Sbjct: 122 LRVQRENKM 130
>gi|162458514|ref|NP_001105018.1| G2-like1 [Zea mays]
gi|13940496|gb|AAK50392.1|AF318580_1 putative transcription factor ZmGLK1 [Zea mays]
gi|413952555|gb|AFW85204.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 475
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 53/74 (71%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
++S +KK +V WT ELH +F+ AV LG+DKAVP +IL++M ++ LTR N+ASHLQK+
Sbjct: 185 KKHSQGKKKAKVDWTPELHRRFVQAVEELGIDKAVPSRILEIMGIDSLTRHNIASHLQKY 244
Query: 243 RLSLKRLGNKTLEA 256
R K + + +EA
Sbjct: 245 RSHRKHMLAREVEA 258
>gi|413952556|gb|AFW85205.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 476
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 53/74 (71%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
++S +KK +V WT ELH +F+ AV LG+DKAVP +IL++M ++ LTR N+ASHLQK+
Sbjct: 185 KKHSQGKKKAKVDWTPELHRRFVQAVEELGIDKAVPSRILEIMGIDSLTRHNIASHLQKY 244
Query: 243 RLSLKRLGNKTLEA 256
R K + + +EA
Sbjct: 245 RSHRKHMLAREVEA 258
>gi|219886905|gb|ACL53827.1| unknown [Zea mays]
Length = 476
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 53/74 (71%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
++S +KK +V WT ELH +F+ AV LG+DKAVP +IL++M ++ LTR N+ASHLQK+
Sbjct: 185 KKHSQGKKKAKVDWTPELHRRFVQAVEELGIDKAVPSRILEIMGIDSLTRHNIASHLQKY 244
Query: 243 RLSLKRLGNKTLEA 256
R K + + +EA
Sbjct: 245 RSHRKHMLAREVEA 258
>gi|62632221|gb|AAX89130.1| golden2-like transcription factor [Zea mays]
Length = 469
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 53/74 (71%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
++S +KK +V WT ELH +F+ AV LG+DKAVP +IL++M ++ LTR N+ASHLQK+
Sbjct: 182 KKHSQGKKKAKVDWTPELHRRFVQAVEELGIDKAVPSRILEIMGIDSLTRHNIASHLQKY 241
Query: 243 RLSLKRLGNKTLEA 256
R K + + +EA
Sbjct: 242 RSHRKHMLAREVEA 255
>gi|325972397|ref|YP_004248588.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
gi|324027635|gb|ADY14394.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
Length = 341
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
++ DDD KIL+ LR+ Y VT L++LR++ + DL++ D+ MP GF
Sbjct: 5 IVTTDDDPAIRKILQIMLRKEGYMVTACEEGNGLLQLLRQSEESIDLILLDIKMPGFSGF 64
Query: 86 KLLELVGLEM-DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
+LLE++ +P+VM++A++D MK + GA DYL KPV E L T + V+
Sbjct: 65 ELLEMIRASYPQIPIVMITAFNDLDTGMKAMRMGASDYLAKPVHREALFATVKRVL 120
>gi|302390526|ref|YP_003826347.1| two component transcriptional regulator, winged helix family
[Thermosediminibacter oceani DSM 16646]
gi|302201154|gb|ADL08724.1| two component transcriptional regulator, winged helix family
[Thermosediminibacter oceani DSM 16646]
Length = 229
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 23 GMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDM 82
G R+L VDD+ L +++ FL + + VT + + ALK+L + FDLV+ D+ MP++
Sbjct: 3 GYRILVVDDEDKLLDLIKNFLEKEGFAVTCADSGVEALKLL--EKRKFDLVVLDIMMPEV 60
Query: 83 DGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
GF +L + ++ +PV+ L+A ++ + G+ G DY+ KP + EL + V+RR
Sbjct: 61 SGFDVLRRIREKIQIPVIFLTARAEEPDKLLGLELGGDDYITKPFSLRELAARIRAVLRR 120
Query: 143 KK 144
K
Sbjct: 121 AK 122
>gi|381149247|gb|AFF60406.1| golden 2-like 2 transcription factor [Capsicum annuum]
Length = 312
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 51/74 (68%)
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFR 243
+N +KK +V WT ELH +F+ AV LG+DKAVP +IL+LM +GLTR N+ASHLQK+R
Sbjct: 87 KNPEGKKKVKVDWTPELHRRFVKAVEKLGVDKAVPSRILELMATDGLTRHNIASHLQKYR 146
Query: 244 LSLKRLGNKTLEAG 257
K L + EA
Sbjct: 147 AHRKHLLAREAEAA 160
>gi|306832962|ref|ZP_07466094.1| response regulator [Streptococcus bovis ATCC 700338]
gi|304424861|gb|EFM27995.1| response regulator [Streptococcus bovis ATCC 700338]
Length = 232
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 70/117 (59%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
VL +DDD+ +++K + + + V N L+++ EN+N F LVI DV MPD+DGF
Sbjct: 4 VLIIDDDKELCALMKKCIEQEEMSALVANGGTEGLRLIDENKNLFSLVILDVMMPDIDGF 63
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
++LE + ++PV+ML+A S + G+ GA DYL KP ++EL +IRR
Sbjct: 64 QVLEKIRETSNIPVLMLTAKSGEDDKVFGLRLGADDYLTKPFSIKELMARVNSLIRR 120
>gi|431778610|ref|ZP_19566820.1| hypothetical protein OM9_00420 [Enterococcus faecium E4389]
gi|430643683|gb|ELB79402.1| hypothetical protein OM9_00420 [Enterococcus faecium E4389]
Length = 232
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 70/117 (59%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
VL +DDD+ +++K + + + V N L+++ EN+N F LVI DV MPD+DGF
Sbjct: 4 VLIIDDDKELCTLMKKCIEQEEMSALVANGGTEGLRLIDENKNLFSLVILDVMMPDIDGF 63
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
++LE + ++PV+ML+A S + G+ GA DYL KP ++EL +IRR
Sbjct: 64 QVLEKIRETSNIPVLMLTAKSGEDDKVFGLRLGADDYLTKPFSIKELMARVNSLIRR 120
>gi|449461539|ref|XP_004148499.1| PREDICTED: two-component response regulator-like APRR2-like
[Cucumis sativus]
gi|449530967|ref|XP_004172463.1| PREDICTED: two-component response regulator-like APRR2-like
[Cucumis sativus]
Length = 521
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
KK +V WT ELH F+ AV LG+D A+P KIL+LM VEGLTR N+ASHLQK+R+ K +
Sbjct: 277 KKTKVDWTPELHRNFVQAVEQLGIDHAIPSKILELMKVEGLTRHNIASHLQKYRMQKKHV 336
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL +D D + L E +Y V A + NF + I +V
Sbjct: 14 FPKGLRVLLLDRDSFSATEIRSKLEEMEYVVYSCTDEKEASSAILNTPGNFHVAILEVCA 73
Query: 80 PDMD-GFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
+ D FKLL G DLP++M S +MK I GA ++LLKP+ ++L+N WQH
Sbjct: 74 RNYDESFKLL---GASKDLPIIMTSDVHCLSTMMKCIALGAVEFLLKPLSEDKLRNIWQH 130
Query: 139 VIRR 142
VI +
Sbjct: 131 VIHK 134
>gi|449439291|ref|XP_004137419.1| PREDICTED: two-component response regulator-like APRR1-like
[Cucumis sativus]
Length = 557
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L D+D + + K L +C Y+V + A + L D+++S+V +P
Sbjct: 32 VRILLCDNDSKSSEEVFKLLLKCSYQVISVSSARQVIDALNAEGPEIDIILSEVDLPMAK 91
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G K+L+ + + +L PV+M+S + +V+K + GA DYL+KP+R EL N W H+
Sbjct: 92 GMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 151
Query: 141 RRKKV 145
RR++
Sbjct: 152 RRRRT 156
>gi|356565422|ref|XP_003550939.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 576
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 50/67 (74%)
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
+KK +V WT ELH KF+ AV LG+D+A+P +IL+LM VE LTR NVASHLQK+R+ ++
Sbjct: 335 RKKIKVDWTPELHKKFVKAVEQLGIDQAIPSRILELMKVESLTRHNVASHLQKYRMHKRQ 394
Query: 249 LGNKTLE 255
+ K E
Sbjct: 395 ILPKEEE 401
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G++VL + D + L Y V+ AL ++ +F + I +V
Sbjct: 37 FPKGLKVLLHERDNISAAEIRAKLEAMDYNVSTFCDENDALSVISSGLESFHIAIVEVSS 96
Query: 80 PDMDG-FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
G FK LE DLP +M S +MK I GA ++L KP+ ++L+N WQH
Sbjct: 97 SSAQGGFKFLENAK---DLPTIMTSNNHCLNTMMKCIALGAVEFLSKPLSEDKLRNIWQH 153
Query: 139 VIRR 142
V+ +
Sbjct: 154 VVHK 157
>gi|323702183|ref|ZP_08113850.1| two component transcriptional regulator, winged helix family
[Desulfotomaculum nigrificans DSM 574]
gi|333924413|ref|YP_004497993.1| winged helix family two component transcriptional regulator
[Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532870|gb|EGB22742.1| two component transcriptional regulator, winged helix family
[Desulfotomaculum nigrificans DSM 574]
gi|333749974|gb|AEF95081.1| two component transcriptional regulator, winged helix family
[Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 224
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPD 81
+G R+L +DDD +L++ L Y V V N T LKM +N +L+I D+ MP
Sbjct: 1 MGARILVIDDDPKITAMLQRVLTYEGYRVEVANDGYTGLKM--AQKNPPELLILDIMMPG 58
Query: 82 MDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIR 141
+DG+++ E +P+++LSA + + +KG+N GA DYL+KP +EEL Q ++R
Sbjct: 59 LDGWEICRRFRRENFIPILILSARDEVESRVKGLNLGADDYLVKPFALEELLARVQALLR 118
Query: 142 RK 143
RK
Sbjct: 119 RK 120
>gi|302847255|ref|XP_002955162.1| hypothetical protein VOLCADRAFT_49095 [Volvox carteri f.
nagariensis]
gi|300259454|gb|EFJ43681.1| hypothetical protein VOLCADRAFT_49095 [Volvox carteri f.
nagariensis]
Length = 61
Score = 81.6 bits (200), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/59 (64%), Positives = 48/59 (81%), Gaps = 1/59 (1%)
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
K+PR+VWT +LH KF AV LG +KAVPK I+ MN++GLTRENVASHLQK+R+ L+R
Sbjct: 3 KRPRLVWTPQLHKKFESAVQKLGTEKAVPKNIMQEMNIDGLTRENVASHLQKYRM-LRR 60
>gi|222628652|gb|EEE60784.1| hypothetical protein OsJ_14365 [Oryza sativa Japonica Group]
Length = 335
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 27/235 (11%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFL--RECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
P G V D+ C ++ E + VTV I AL L+ + DLV++DV
Sbjct: 7 LPAGRLSAMVIDEDKCHADSTSYMLSAELNFSVTVFTSPIKALDFLQNHAEGVDLVLADV 66
Query: 78 YMPDMDGFKLLELV-GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTW 136
+M +M+GF L++ L + V+M+S + + + + GA + KP+ +KN W
Sbjct: 67 HMEEMNGFDFLKVARELHKSIQVIMMSTETTMYTMKRCVKLGAQFLVNKPLDAGTIKNLW 126
Query: 137 QH----VIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGH--ENENSTTQK 190
Q+ V+R +K+ K Q DE ++ EN + T+K
Sbjct: 127 QYVDLKVLRMEKI-----------------KDLLQGIGDESTCANETNSLAENPKNDTKK 169
Query: 191 KPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLS 245
K ++WT L KF+ A+ +LG D A PK I +M V+ + +A+HLQ LS
Sbjct: 170 KYYLMWTPHLQKKFLHALQILGKD-ASPKNIKKIMGVDNIDCRQIAAHLQMQILS 223
>gi|288556695|ref|YP_003428630.1| two-component response regulator [Bacillus pseudofirmus OF4]
gi|288547855|gb|ADC51738.1| two-component response regulator [Bacillus pseudofirmus OF4]
Length = 230
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 80/136 (58%), Gaps = 13/136 (9%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++L +DD++ K+LE ++ Y++ + AI A L N+ + L++ D+ MP+M G
Sbjct: 3 KILIIDDEREMQKLLELCIQSSSYDIRTLSSAIEAEFYL--NKEDIHLILLDIMMPEMTG 60
Query: 85 FKLLELVG-LEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK 143
F+ L+L+ L+ ++PV++++A DT+ V+KG+ GA D++ KP ELK Q VI+
Sbjct: 61 FEFLKLINELQKEIPVILITAMDDTEAVVKGLELGAYDFITKPFEPRELKARVQSVIK-- 118
Query: 144 KVDPKDQNRSPHEFEK 159
R+ H FEK
Sbjct: 119 --------RTEHLFEK 126
>gi|159477193|ref|XP_001696695.1| hypothetical protein CHLREDRAFT_130971 [Chlamydomonas reinhardtii]
gi|158275024|gb|EDP00803.1| predicted protein [Chlamydomonas reinhardtii]
Length = 69
Score = 81.3 bits (199), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/71 (57%), Positives = 51/71 (71%), Gaps = 4/71 (5%)
Query: 174 EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
E+ DDG + K+PR+VWT +LH KF AV LG DKAVPK I+ MN++GLTRE
Sbjct: 3 EEYADDG----TTRAVKRPRLVWTPQLHRKFESAVIKLGEDKAVPKTIMQEMNIDGLTRE 58
Query: 234 NVASHLQKFRL 244
NVASHLQK+R+
Sbjct: 59 NVASHLQKYRM 69
>gi|260063704|ref|YP_003196784.1| two-component system response regulator [Robiginitalea biformata
HTCC2501]
gi|88783149|gb|EAR14322.1| two-component system response regulator [Robiginitalea biformata
HTCC2501]
Length = 229
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 78/128 (60%), Gaps = 3/128 (2%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPD 81
+G R+L ++D+ + + L+E Y V V L+ML++ +FDLVI D+ +P
Sbjct: 1 MGNRILLIEDEYAIASFVTQGLQESGYAVAVCYDGEKGLEMLQDG--DFDLVILDIVLPG 58
Query: 82 MDGFKLLELV-GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
MDG ++ + G +DLP++ML+A T+ V++G++ GA DYL+KP + +EL+ + +
Sbjct: 59 MDGREVARTIRGQGLDLPILMLTALGSTENVVRGLDSGADDYLVKPFKFKELEARVRALS 118
Query: 141 RRKKVDPK 148
RR+ P+
Sbjct: 119 RRRSSGPR 126
>gi|414591290|tpg|DAA41861.1| TPA: hypothetical protein ZEAMMB73_323779 [Zea mays]
Length = 657
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 59 ALKMLRENRNNFDLVISDVYMPDMDGFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGI 115
A L + NN DLV+++V+MP + G LL + + ++PV+M+S+ D V K +
Sbjct: 46 AWAYLEDKGNNIDLVLTEVFMPGVSGISLLSRIMRHNIFKNIPVIMMSSSDDMSTVFKCL 105
Query: 116 NHGACDYLLKPVRMEELKNTWQHVIRRK 143
+ GA D+L+KP+R ELKN WQHV R++
Sbjct: 106 SKGAVDFLVKPIRKNELKNLWQHVWRQR 133
>gi|402817698|ref|ZP_10867285.1| two component transcriptional regulator, winged helix family
[Paenibacillus alvei DSM 29]
gi|402504670|gb|EJW15198.1| two component transcriptional regulator, winged helix family
[Paenibacillus alvei DSM 29]
Length = 227
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 73/119 (61%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
M++L V+DD+T LE L++ ++ + + +A KMLRE + F L + D+ +PD
Sbjct: 1 MKILVVEDDKTIATGLEYSLQQDHFDTALCHDVASAKKMLREEIDQFALCLFDLSLPDGS 60
Query: 84 GFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
G++L ++V D+PV+ L+A D V+ G++ GA DY+ KP R+ EL + + V+RR
Sbjct: 61 GYELCKMVKERQDIPVIFLTAIDDEVNVVMGLDMGADDYITKPFRVRELLSRIKSVLRR 119
>gi|391868155|gb|AFM44933.1| golden2-like protein [Solanum lycopersicum]
gi|395629268|gb|AFN69447.1| golden 2-like 2 transcription factor [Solanum lycopersicum]
Length = 310
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 185 NSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRL 244
N +KK ++ WT ELH KF+ A+ LG+DKAVP +IL+LM GLTR N+ASHLQK+R
Sbjct: 79 NPQGKKKVKLDWTPELHRKFVKAIEKLGVDKAVPSRILELMATHGLTRHNIASHLQKYRA 138
Query: 245 SLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFG 279
K L + EA AS+ + Y + G G
Sbjct: 139 HRKHLLAREAEA---ASLNHRKQMYSGATTIGGGG 170
>gi|319956809|ref|YP_004168072.1| winged helix family two component transcriptional regulator
[Nitratifractor salsuginis DSM 16511]
gi|319419213|gb|ADV46323.1| two component transcriptional regulator, winged helix family
[Nitratifractor salsuginis DSM 16511]
Length = 223
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 78/137 (56%), Gaps = 11/137 (8%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+++L V+DD + L FLR+ ++V AL L++N +D+++ DV +PD
Sbjct: 7 VKILLVEDDVETSEFLSTFLRDSGFDVDTVFSVTDALSHLKQN--PYDILLLDVNLPDYS 64
Query: 84 GFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELK-NTWQHVIRR 142
G +LL+ + E+ LP ++LSAY DT+ + +GA DY++KP+ +EEL+ W + +
Sbjct: 65 GMELLKSIKGELSLPTIILSAYGDTRSKIMAFRYGATDYMVKPIDLEELEARIWVQLGKN 124
Query: 143 KKVDPKDQNRSPHEFEK 159
K+ P +FE+
Sbjct: 125 SKI--------PSDFEE 133
>gi|226315460|ref|YP_002775356.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
gi|226098410|dbj|BAH46852.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
Length = 1024
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 67/112 (59%), Gaps = 5/112 (4%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R++ VDDD L IL K L QYEV+ A AL +L RN DLVISDV MP + G
Sbjct: 698 RIIVVDDDSINLNILSKMLESDQYEVSTATSAQQALSIL--ERNPVDLVISDVMMPHVSG 755
Query: 85 FKLLELVGLE---MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELK 133
++L ++ ++LPV++L+A S ++ ++ G GA DY+ KPV ELK
Sbjct: 756 YELTRIIRERFSVLELPVLLLTARSRSEDIIAGFQAGANDYVKKPVDAWELK 807
>gi|228990099|ref|ZP_04150071.1| Two-component response regulator vanRB [Bacillus pseudomycoides DSM
12442]
gi|228769627|gb|EEM18218.1| Two-component response regulator vanRB [Bacillus pseudomycoides DSM
12442]
Length = 228
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 79/135 (58%), Gaps = 6/135 (4%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L V+DDQ +++++FL QY VTV + + +K N+ +FDL++ DV MP+++GF
Sbjct: 13 ILVVEDDQEIQELIKQFLMTQQYAVTVASDGLEGMKQF--NKQSFDLILLDVMMPNLNGF 70
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKV 145
++ +++ + ++P++ML+A + + MKG + G DY+ KP L + V+RR
Sbjct: 71 EVAKMIRSQSNIPIIMLTALEEEQDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRR--- 127
Query: 146 DPKDQNRSPHEFEKS 160
DQ+ H F K
Sbjct: 128 -SYDQSTENHLFFKE 141
>gi|308913672|gb|ADO51646.1| TOC1b [Zea mays]
Length = 488
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L D D + + + + L C Y VT + +L D+++++V +P
Sbjct: 28 VRILLCDGDASSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPVSK 87
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
FK+L+ + DL P++M+S + +V+K + GA +YL+KP+R EL N W HV
Sbjct: 88 CFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVW 147
Query: 141 RRKKV 145
RR+++
Sbjct: 148 RRRRM 152
>gi|452820793|gb|EME27831.1| myb family transcription factor [Galdieria sulphuraria]
Length = 552
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 191 KPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR-L 249
K R++WT ELH +F+ AVN +G++ AVPK IL LMNVEGLT E+V SHLQK+R +LK+
Sbjct: 324 KKRLIWTPELHDRFLKAVNAVGVNNAVPKTILYLMNVEGLTSEHVKSHLQKYRNNLKKAA 383
Query: 250 GNKTLEAGMVASVGS 264
+ E G S S
Sbjct: 384 ARRQRETGHFHSNAS 398
>gi|395216223|ref|ZP_10401240.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pontibacter sp. BAB1700]
gi|394455509|gb|EJF09975.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pontibacter sp. BAB1700]
Length = 433
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+L +DDD T +L FL+ QYEV A L L+ + +FDL+++D +PD +G
Sbjct: 3 RILLIDDDPTFCLMLSTFLKRQQYEVKTAYTAGEGLSQLKAD--SFDLILTDFRLPDKNG 60
Query: 85 FKLLELVG-LEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEE 131
+LLE + L+ +PV++++ Y+D + +K I GA +YL KP+ +E
Sbjct: 61 LELLEQIRVLDTQVPVILMTHYADIRTAVKAIKMGAFEYLAKPINPDE 108
>gi|229000557|ref|ZP_04160100.1| Two-component response regulator vanRB [Bacillus mycoides Rock3-17]
gi|229003857|ref|ZP_04161665.1| Two-component response regulator vanRB [Bacillus mycoides Rock1-4]
gi|228757365|gb|EEM06602.1| Two-component response regulator vanRB [Bacillus mycoides Rock1-4]
gi|228759200|gb|EEM08203.1| Two-component response regulator vanRB [Bacillus mycoides Rock3-17]
Length = 228
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 79/135 (58%), Gaps = 6/135 (4%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L V+DDQ +++++FL QY VTV + + +K N+ +FDL++ DV MP+++GF
Sbjct: 13 ILVVEDDQEIQELIKQFLMTQQYAVTVASDGLEGMKQF--NKQSFDLILLDVMMPNLNGF 70
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKV 145
++ +++ + ++P++ML+A + + MKG + G DY+ KP L + V+RR
Sbjct: 71 EVAKMIRSQSNIPIIMLTALEEEQDQMKGFDLGIDDYITKPFSFHVLIRRVEAVLRR--- 127
Query: 146 DPKDQNRSPHEFEKS 160
DQ+ H F K
Sbjct: 128 -SYDQSTENHLFFKE 141
>gi|451946632|ref|YP_007467227.1| histidine kinase [Desulfocapsa sulfexigens DSM 10523]
gi|451905980|gb|AGF77574.1| histidine kinase [Desulfocapsa sulfexigens DSM 10523]
Length = 757
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
VL VDDD+ +K+ E+ L+ Y+V+ NR AL R + N FDL+I+D+ MP + G
Sbjct: 633 VLIVDDDEAIVKMEEQMLKSFGYQVSAFNRCEEALNEFRSHPNAFDLIITDMTMPGITGL 692
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK 143
+L E++ L D+PV++ + +S+ K + G C YL+KP+ ++L + V+ +K
Sbjct: 693 QLTREVLALRSDMPVILCTGFSELINEKKAKDAGICQYLMKPLLKKDLAIAVREVLDKK 751
>gi|150010173|ref|YP_001304916.1| two-componnent system response regulator [Parabacteroides
distasonis ATCC 8503]
gi|256838994|ref|ZP_05544504.1| two-component system response regulator [Parabacteroides sp. D13]
gi|301308222|ref|ZP_07214176.1| HAMP domain protein [Bacteroides sp. 20_3]
gi|423333376|ref|ZP_17311157.1| hypothetical protein HMPREF1075_02808 [Parabacteroides distasonis
CL03T12C09]
gi|423339886|ref|ZP_17317626.1| hypothetical protein HMPREF1059_03551 [Parabacteroides distasonis
CL09T03C24]
gi|149938597|gb|ABR45294.1| two-componnent system response regulator [Parabacteroides
distasonis ATCC 8503]
gi|256739913|gb|EEU53237.1| two-component system response regulator [Parabacteroides sp. D13]
gi|300833692|gb|EFK64308.1| HAMP domain protein [Bacteroides sp. 20_3]
gi|409228256|gb|EKN21148.1| hypothetical protein HMPREF1075_02808 [Parabacteroides distasonis
CL03T12C09]
gi|409228704|gb|EKN21589.1| hypothetical protein HMPREF1059_03551 [Parabacteroides distasonis
CL09T03C24]
Length = 387
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 87/145 (60%), Gaps = 10/145 (6%)
Query: 22 IGMRVLAVDDDQTCLKILEKF----LRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
+ +++L+VDD+Q +L ++ +R+ +YE + + + AL+M+ ++ +FD+++SD+
Sbjct: 1 MAIKILSVDDEQDLEALLTQYFRRKIRKGEYEFSFAHNGLEALRMMLDH-PDFDIILSDI 59
Query: 78 YMPDMDGFKLLELVGLEMDLP---VVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKN 134
MP+MDG LL + EM P +++SAY D + + +NHGA D+ KP+ ME+L+
Sbjct: 60 NMPEMDGLTLLTKIN-EMRNPALKCIIVSAYGDMENIRTAMNHGAFDFATKPIDMEDLER 118
Query: 135 TWQHVIRRKKVDPKDQNRSPHEFEK 159
T + + + K+ + H+ E+
Sbjct: 119 TIEKAVEQISF-IKEAQKEHHQLEE 142
>gi|295913655|gb|ADG58070.1| transcription factor [Lycoris longituba]
Length = 151
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/90 (42%), Positives = 60/90 (66%)
Query: 162 RKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKI 221
R+R + E D++ E S+ ++ R+VWT +LH +F+ + LG +AVPKKI
Sbjct: 60 RRRPPAEKPPETSCNDEEVLEGSCSSRNQRRRLVWTPQLHKRFLDVMARLGSKEAVPKKI 119
Query: 222 LDLMNVEGLTRENVASHLQKFRLSLKRLGN 251
+++MNVEGLTRE+VASHLQK+++ K + +
Sbjct: 120 MEMMNVEGLTREHVASHLQKYQMKFKEISS 149
>gi|356543865|ref|XP_003540379.1| PREDICTED: transcription activator GLK1-like [Glycine max]
Length = 441
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
N N ++K +V WT ELH +F+ AV LG+DKAVP +IL++M ++ LTR N+ASHLQK+
Sbjct: 162 NNNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKY 221
Query: 243 RLSLKRLGNKTLEAG 257
R K L + EA
Sbjct: 222 RSHRKHLLAREAEAA 236
>gi|405983351|ref|ZP_11041657.1| hypothetical protein HMPREF9451_00747 [Slackia piriformis YIT
12062]
gi|404388957|gb|EJZ84038.1| hypothetical protein HMPREF9451_00747 [Slackia piriformis YIT
12062]
Length = 220
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+LA+DD+ T L +L L++ +EVT A AL++ N + FDL++ DV MP DG
Sbjct: 3 RILAIDDEPTILSLLATILKKDGHEVTAVESADRALEL---NLSRFDLILCDVMMPGTDG 59
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
F + +V +D P+V L+A S+ + G++ GA DY+ KP EL+ +RR++
Sbjct: 60 FAFVSVVRDRLDCPIVFLTAKSEENDAVTGLSVGADDYIRKPFGAAELRAKVSAHLRRER 119
>gi|255012567|ref|ZP_05284693.1| two-componnent system response regulator [Bacteroides sp. 2_1_7]
gi|262382540|ref|ZP_06075677.1| two-component system response regulator [Bacteroides sp. 2_1_33B]
gi|298374541|ref|ZP_06984499.1| sigma factor SigB regulation protein RsbU [Bacteroides sp. 3_1_19]
gi|410104208|ref|ZP_11299123.1| hypothetical protein HMPREF0999_02895 [Parabacteroides sp. D25]
gi|262295418|gb|EEY83349.1| two-component system response regulator [Bacteroides sp. 2_1_33B]
gi|298268909|gb|EFI10564.1| sigma factor SigB regulation protein RsbU [Bacteroides sp. 3_1_19]
gi|409234720|gb|EKN27545.1| hypothetical protein HMPREF0999_02895 [Parabacteroides sp. D25]
Length = 390
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 87/145 (60%), Gaps = 10/145 (6%)
Query: 22 IGMRVLAVDDDQTCLKILEKF----LRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
+ +++L+VDD+Q +L ++ +R+ +YE + + + AL+M+ ++ +FD+++SD+
Sbjct: 1 MAIKILSVDDEQDLEALLTQYFRRKIRKGEYEFSFAHNGLEALRMMLDH-PDFDIILSDI 59
Query: 78 YMPDMDGFKLLELVGLEMDLP---VVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKN 134
MP+MDG LL + EM P +++SAY D + + +NHGA D+ KP+ ME+L+
Sbjct: 60 NMPEMDGLTLLTKIN-EMRNPALKCIIVSAYGDMENIRTAMNHGAFDFATKPIDMEDLER 118
Query: 135 TWQHVIRRKKVDPKDQNRSPHEFEK 159
T + + + K+ + H+ E+
Sbjct: 119 TIEKAVEQISF-IKEAQKEHHQLEE 142
>gi|359491315|ref|XP_002281757.2| PREDICTED: two-component response regulator-like APRR1-like [Vitis
vinifera]
Length = 556
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 71/125 (56%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L D+D + L C Y+VT A + L ++ D+++++V +P
Sbjct: 27 VRILLCDNDTKSSDEIFTLLCGCSYQVTSVRSARQVIDALNAEGHDIDIILAEVDLPMTK 86
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G K+L+ + + +L P++M+SA + +V+K + GA DYL+KP+R EL N W H+
Sbjct: 87 GMKMLKYIMRDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 146
Query: 141 RRKKV 145
RR+++
Sbjct: 147 RRRRM 151
>gi|114569317|ref|YP_755997.1| two component transcriptional regulator [Maricaulis maris MCS10]
gi|114339779|gb|ABI65059.1| two component transcriptional regulator, winged helix family
[Maricaulis maris MCS10]
Length = 233
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 2/119 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD +L++FL+E + V+ A AL L N FDL++ DV MP M+GF
Sbjct: 11 ILVVDDDDRIRNLLKRFLQERGFRVSTAPNAGKALSTL--NSLAFDLLVLDVMMPGMNGF 68
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
+L E V + P+++L+A D + +KG++ GA DYL KP EEL ++RR +
Sbjct: 69 ELTEAVRKRGETPILLLTARGDAEDRIKGLSLGADDYLPKPFEPEELVLRINAILRRAR 127
>gi|225377290|ref|ZP_03754511.1| hypothetical protein ROSEINA2194_02937 [Roseburia inulinivorans DSM
16841]
gi|225210821|gb|EEG93175.1| hypothetical protein ROSEINA2194_02937 [Roseburia inulinivorans DSM
16841]
Length = 223
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 75/128 (58%), Gaps = 4/128 (3%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+L V+DD ++L+ FL+E YEV V N + AL + R +DL++ D+ +P +DG
Sbjct: 3 RILVVEDDFDIQELLQNFLQEAGYEVAVANDGVEALSLFAGER--YDLIVLDIMLPKIDG 60
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR-- 142
+ + EL+ + D+P++ML+A S + +KG++ DY+ KP M L V+RR
Sbjct: 61 YGVCELIRKQSDVPIIMLTALSGEEDQIKGLDLQVDDYITKPFSMPVLLRKIAAVLRRSN 120
Query: 143 KKVDPKDQ 150
++ D K Q
Sbjct: 121 RETDEKYQ 128
>gi|189424804|ref|YP_001951981.1| response regulator receiver sensor signal transduction histidine
kinase [Geobacter lovleyi SZ]
gi|189421063|gb|ACD95461.1| response regulator receiver sensor signal transduction histidine
kinase [Geobacter lovleyi SZ]
Length = 417
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 5/194 (2%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPD 81
I +L VDD+ LK+L+ FL Y+V AL ++ + DL+I+D+ MPD
Sbjct: 14 IKASILLVDDEPMVLKMLQTFLEAQGYQVICAPGGHEALAIIEQQGLGIDLLITDIRMPD 73
Query: 82 MDGFKLLELVGLEMD-LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
M+G +LLE V + LP ++++ Y+D LV++G+ A D L KP+ ++L V+
Sbjct: 74 MNGIRLLEAVHQFLPALPALLMTGYTDFDLVVEGLKQHAFDLLFKPIDFDQLNWCISKVL 133
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTEL 200
+Q H E+ K+ Q E + + +E + +++ + + E
Sbjct: 134 AFLMTQRLEQQYRTH-LEEQVAKQTKQLCEQLEMLQEAHHKASEVAELKREFLSLISHEF 192
Query: 201 HTKF---IGAVNLL 211
T +GAV LL
Sbjct: 193 RTPLNGIVGAVQLL 206
>gi|255553629|ref|XP_002517855.1| DNA binding protein, putative [Ricinus communis]
gi|223542837|gb|EEF44373.1| DNA binding protein, putative [Ricinus communis]
Length = 424
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 52/76 (68%)
Query: 182 ENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQK 241
+N N ++K +V WT +LH +F+ AV LG+DKAVP +IL+LM ++ LTR N+ASHLQK
Sbjct: 140 KNSNHQGKRKVKVDWTPDLHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQK 199
Query: 242 FRLSLKRLGNKTLEAG 257
+R K L + EA
Sbjct: 200 YRSHRKHLLAREAEAA 215
>gi|413925155|gb|AFW65087.1| hypothetical protein ZEAMMB73_389889 [Zea mays]
Length = 319
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 72/127 (56%), Gaps = 6/127 (4%)
Query: 57 ITALKMLRENRNNFDLVISDVYMPDMDGFKLL-ELVGLE--MDLPVVMLSAYSDTKLVMK 113
+ A ++RE FDLV+++V MP + G +LL +V + ++PVVM+S+ V+K
Sbjct: 1 MKAWGVMRERAYAFDLVLTEVAMPSLSGIQLLSRIVAADECKNIPVVMMSSQDSIGTVLK 60
Query: 114 GINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPK---DQNRSPHEFEKSYRKRKDQDGE 170
+ GA D+L+KPVR EL+N WQHV RR ++ + +N + + + GE
Sbjct: 61 CMQKGAVDFLVKPVRKNELRNLWQHVWRRHAMNCQTNGSENNAASNHISANVANGSKTGE 120
Query: 171 DEDEDGD 177
+ DE+ D
Sbjct: 121 NSDEESD 127
>gi|326498541|dbj|BAJ98698.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520928|dbj|BAJ92827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 459
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
++S +KK +V WT ELH +F+ AV LG+DKAVP +IL++M + LTR N+ASHLQK+
Sbjct: 173 GKSSHGKKKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGINSLTRHNIASHLQKY 232
Query: 243 RLSLKRLGNKTLEA 256
R K + + EA
Sbjct: 233 RSHRKHMMAREAEA 246
>gi|51891888|ref|YP_074579.1| two-component response regulator [Symbiobacterium thermophilum IAM
14863]
gi|51855577|dbj|BAD39735.1| two-component response regulator, probably involved in phosphate
sensing [Symbiobacterium thermophilum IAM 14863]
Length = 235
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 75/134 (55%), Gaps = 4/134 (2%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP+ R+L VDD+ + L+++ LR +EV + L++ RE DLVI DV +
Sbjct: 2 FPVPERILVVDDEPSILELVAYNLRRAGFEVLTADNGEDGLRIAREE--EIDLVILDVML 59
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
P +DGF++L + +LPV+ML+A + + G GA DY+ KP EL + +
Sbjct: 60 PGIDGFEVLRALRRHSELPVLMLTARGEEIDRVVGFEIGADDYVTKPFSPRELTGRVKAI 119
Query: 140 IRRKK--VDPKDQN 151
+RR + +P+DQ+
Sbjct: 120 LRRARRSAEPQDQD 133
>gi|452972816|gb|EME72643.1| two-component response regulator [Bacillus sonorensis L12]
Length = 222
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 80/129 (62%), Gaps = 4/129 (3%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++LAVDDD L+++ K L ++EVT T ++I + + E N ++L++ DV MPD DG
Sbjct: 3 KILAVDDDAAILRLVRKMLSIKKHEVT-TLQSIKDITI--EELNKYNLILLDVMMPDEDG 59
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
FK+ E + +D+P++ ++A SD ++KG++ G DY++KP + E+ + +RR +
Sbjct: 60 FKICEKIRSLIDIPIIFMTAKSDESSIIKGLSIGGDDYIVKPFSIHEVNARIEAHLRR-E 118
Query: 145 VDPKDQNRS 153
PK +S
Sbjct: 119 ARPKKGTKS 127
>gi|357482309|ref|XP_003611440.1| Two-component response regulator-like protein [Medicago truncatula]
gi|355512775|gb|AES94398.1| Two-component response regulator-like protein [Medicago truncatula]
Length = 548
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 49/71 (69%)
Query: 184 ENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFR 243
EN +KK +V WT ELH KF+ AV LG+D+A+P +IL+LM V+GLTR NVASHLQ F
Sbjct: 304 ENKANRKKMKVDWTAELHKKFVKAVEQLGIDQAIPSRILELMKVDGLTRHNVASHLQIFV 363
Query: 244 LSLKRLGNKTL 254
R+ + +
Sbjct: 364 EQKYRMHKRQI 374
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 9 SSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRN 68
+++D G D FP G+RVL ++ D + L Y V+ AL + +
Sbjct: 4 TANDLQGWKD-FPKGLRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPK 62
Query: 69 NFDLVISDVYMPDMDG-FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPV 127
F + I +V + DG FK LE DLP +M S +MK I GA ++L KP+
Sbjct: 63 CFHVAIVEVSISCPDGGFKFLENAK---DLPTIMTSNSQCINTMMKCIALGAVEFLTKPL 119
Query: 128 RMEELKNTWQHVIRR 142
++LKN WQHV+ +
Sbjct: 120 SEDKLKNIWQHVVHK 134
>gi|296272386|ref|YP_003655017.1| winged helix family two component transcriptional regulator
[Arcobacter nitrofigilis DSM 7299]
gi|296096560|gb|ADG92510.1| two component transcriptional regulator, winged helix family
[Arcobacter nitrofigilis DSM 7299]
Length = 221
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 72/115 (62%), Gaps = 7/115 (6%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFD--LVISDVYMPDM 82
+++ ++DD+ C +++ FL EC ++V V N +A+ N FD L++ D+ +PD
Sbjct: 6 KIMLIEDDENCSFLIKVFLEECSFDVDVVNTVTSAI----SNTKFFDYSLILLDINLPDY 61
Query: 83 DGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELK-NTW 136
+GF++L+ + ++P+++LSAYSD K+ + GA DY++KP+ +EL+ W
Sbjct: 62 NGFEVLKYLNTHKNIPIIVLSAYSDKKIKLMAFKLGARDYMVKPIDPDELEARIW 116
>gi|268316364|ref|YP_003290083.1| Fis family two component sigma-54 specific transcriptional
regulator [Rhodothermus marinus DSM 4252]
gi|262333898|gb|ACY47695.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodothermus marinus DSM 4252]
Length = 472
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDD+ + E+ +T A+ A+++L++ + FDLVI+D MPDMDG
Sbjct: 11 ILLVDDEHLLHTLFERLFTRHGLRLTSCYNALQAMEVLKKEADAFDLVITDFKMPDMDGL 70
Query: 86 KLLELVGLEM-DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
+LL + E DL V+M++A+++ + ++ + +GA DY+ KP EEL Q + R++
Sbjct: 71 ELLAYIRQEHPDLQVIMITAHANVQHAVRAMQNGAIDYIPKPFSTEELVERVQAALARRR 130
Query: 145 VDPKDQNRSP 154
+ + + P
Sbjct: 131 EQQEARAKQP 140
>gi|239616521|ref|YP_002939843.1| response regulator receiver modulated metal dependent
phosphohydrolase [Kosmotoga olearia TBF 19.5.1]
gi|239505352|gb|ACR78839.1| response regulator receiver modulated metal dependent
phosphohydrolase [Kosmotoga olearia TBF 19.5.1]
Length = 397
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 6/191 (3%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPD 81
I M++LAVDD++ + +LE + YEV + + AL+ L E +FD+VISD+ MP+
Sbjct: 30 INMKILAVDDNKENIYMLETLFKSYGYEVESSQNGVEALEKLAEQ--DFDVVISDILMPE 87
Query: 82 MDGFKLLELVGLE---MDLPVVMLS-AYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
MDGF+L V ++ ++P ++ + AY+D + ++ G +++KP+ + +
Sbjct: 88 MDGFQLCRRVKMDDRLKEIPFILYTAAYTDPEDRKFALSLGVDRFIIKPLEPDAFVKIVR 147
Query: 138 HVIRRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWT 197
VI+ KV P + N+ ++ E Y K ++ + EDG E Q +V T
Sbjct: 148 EVIQNHKVKPLNNNKVVNKEEIVYLKNYNERLIKKLEDGMLQLEEKNKELEQSYKKVQRT 207
Query: 198 TELHTKFIGAV 208
+ + IG V
Sbjct: 208 LDSVVETIGLV 218
>gi|297733942|emb|CBI15189.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 71/125 (56%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L D+D + L C Y+VT A + L ++ D+++++V +P
Sbjct: 25 VRILLCDNDTKSSDEIFTLLCGCSYQVTSVRSARQVIDALNAEGHDIDIILAEVDLPMTK 84
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G K+L+ + + +L P++M+SA + +V+K + GA DYL+KP+R EL N W H+
Sbjct: 85 GMKMLKYIMRDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 144
Query: 141 RRKKV 145
RR+++
Sbjct: 145 RRRRM 149
>gi|449442040|ref|XP_004138790.1| PREDICTED: transcription activator GLK1-like [Cucumis sativus]
Length = 455
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 48/68 (70%)
Query: 190 KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
+K +V WT ELH +F+ AV LG+DKAVP +IL+LM +E LTR NVASHLQK+R K L
Sbjct: 170 RKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIECLTRHNVASHLQKYRSHRKHL 229
Query: 250 GNKTLEAG 257
+ EA
Sbjct: 230 LAREAEAA 237
>gi|260777772|ref|ZP_05886665.1| two component transcriptional regulator winged helix family [Vibrio
coralliilyticus ATCC BAA-450]
gi|260605785|gb|EEX32070.1| two component transcriptional regulator winged helix family [Vibrio
coralliilyticus ATCC BAA-450]
Length = 250
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L V+DD+ + L L++ +Y+VT + AL L+++ NFDL+I D+ +P++DGF
Sbjct: 27 ILLVEDDRHLNQQLTSLLQDSRYQVTNLDCGAEALNCLKQS--NFDLIILDINLPEVDGF 84
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
LL + + PV+ML+AY + ++G+ +GA DY+ KP E+ + ++RR
Sbjct: 85 GLLNFIRFHSNTPVIMLTAYGAEEHRIRGLRYGADDYISKPCNFTEVSLRIEAILRR 141
>gi|297569164|ref|YP_003690508.1| Fis family transcriptional regulator [Desulfurivibrio alkaliphilus
AHT2]
gi|296925079|gb|ADH85889.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfurivibrio alkaliphilus AHT2]
Length = 505
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPD 81
+G ++L VDD+Q L + L YEV V AL+M+ DLV++D+ MP+
Sbjct: 4 MGRKILVVDDEQNMRVALYEALSRGGYEVKVAENGRMALEMVESEAP--DLVVTDIRMPE 61
Query: 82 MDGFKLLELV-GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
MDG +L+ + + LPVV+++ Y+ + ++ + GA DY+LKP +E ++ T + V+
Sbjct: 62 MDGIAMLQQIQAVRPGLPVVIITGYATVETAVEAMKQGAVDYILKPFPVEVIEETIKKVM 121
Query: 141 RRK 143
R++
Sbjct: 122 RQQ 124
>gi|403235663|ref|ZP_10914249.1| winged helix family two component transcriptional regulator
[Bacillus sp. 10403023]
Length = 229
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 71/119 (59%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
M++L V+DD+T L L + YE + + A A +++ E N DL + D+ +PD
Sbjct: 1 MKILLVEDDKTIATGLNYSLTQDGYETFICHNADDAKRVINEKINEIDLCLFDLSLPDGS 60
Query: 84 GFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
G++L ELV +MD PV+ L+A D V+ G++ GA DY+ KP R+ EL + + V+RR
Sbjct: 61 GYELCELVKKQMDKPVIFLTALDDEVNVVMGLDMGADDYITKPFRIRELLSRIKSVLRR 119
>gi|168011157|ref|XP_001758270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|55669165|gb|AAV54521.1| golden 2-like protein 2 [Physcomitrella patens]
gi|162690726|gb|EDQ77092.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 48/69 (69%)
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
+KK +V WT ELH +F+ AV LG++KA P +IL+LM V+ LTR N+ASHLQK+R +
Sbjct: 224 KKKAKVDWTPELHRRFVHAVEQLGVEKAYPSRILELMGVQCLTRHNIASHLQKYRSHRRH 283
Query: 249 LGNKTLEAG 257
L + EA
Sbjct: 284 LAAREAEAA 292
>gi|148379930|ref|YP_001254471.1| DNA-binding response regulator [Clostridium botulinum A str. ATCC
3502]
gi|153931088|ref|YP_001384228.1| DNA-binding response regulator [Clostridium botulinum A str. ATCC
19397]
gi|153937795|ref|YP_001387768.1| DNA-binding response regulator [Clostridium botulinum A str. Hall]
gi|148289414|emb|CAL83510.1| two-component response regulator [Clostridium botulinum A str. ATCC
3502]
gi|152927132|gb|ABS32632.1| DNA-binding response regulator [Clostridium botulinum A str. ATCC
19397]
gi|152933709|gb|ABS39208.1| DNA-binding response regulator [Clostridium botulinum A str. Hall]
Length = 221
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+L V+DD I+ + L+E Y V V + A++M R R NFDL+I DV +P +DG
Sbjct: 4 RILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFR--RGNFDLIILDVMLPKIDG 61
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
F + E++ E +P++ML+A + + MKG DY+ KP + L + V+RR
Sbjct: 62 FVVCEIIRKESSMPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA- 120
Query: 145 VDPKDQNRSPHEFEK 159
+ ++N S FE+
Sbjct: 121 -NGLEENNSTLTFEE 134
>gi|146298401|ref|YP_001192992.1| two component sigma-54 specific Fis family transcriptional
regulator [Flavobacterium johnsoniae UW101]
gi|146152819|gb|ABQ03673.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Flavobacterium johnsoniae UW101]
Length = 453
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++L ++DD + K+LEKFL + +YEV+V A A +++ +FDL+++D+ +PD DG
Sbjct: 3 KILVIEDDISFCKLLEKFLTKNKYEVSVAFSASEARAIIK--NESFDLILTDLRLPDSDG 60
Query: 85 FKLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK 143
L+ E +PV++++ YSD +K I +GA DY+ KP +E+ + ++
Sbjct: 61 IGLMSEFKNEYPQVPVILMTGYSDVNTAVKAIKNGAADYISKPFNPDEVLLVITNALQTS 120
Query: 144 KVDPKDQNRSPHEFEKSYRKRKDQDGE 170
K + +++ +P + +K+ +K + E
Sbjct: 121 K-EEQEEIETPVKQKKAVKKTASTENE 146
>gi|295913318|gb|ADG57915.1| transcription factor [Lycoris longituba]
Length = 150
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 57/85 (67%)
Query: 163 KRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKIL 222
+R + E D++ ++ S+ ++ R+VWT +LH +F+ + LG + VPKKI+
Sbjct: 60 RRPPAEKPPEASCNDEEVLKDSCSSRNQRRRLVWTPQLHKRFLDVMARLGSKEVVPKKIM 119
Query: 223 DLMNVEGLTRENVASHLQKFRLSLK 247
++MNVEGLTRE+VASHLQK+++ K
Sbjct: 120 EMMNVEGLTREHVASHLQKYQMKFK 144
>gi|408492641|ref|YP_006869010.1| two-component system nitrogen sensor response regulator NR(I)
[Psychroflexus torquis ATCC 700755]
gi|408469916|gb|AFU70260.1| two-component system nitrogen sensor response regulator NR(I)
[Psychroflexus torquis ATCC 700755]
Length = 455
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++L +DDD K L +LR Y + ++ + AL++L+ FDLVI+D +P M+G
Sbjct: 3 KILIIDDDPFFNKTLSNYLRRFDYSIETSSSSEEALEILK--TETFDLVITDYRLPKMNG 60
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
+L+E + ++PV++++ YSD K +K I GA +++ KPV EE K ++ +
Sbjct: 61 LELIEKIKTHWNIPVILITNYSDIKTAVKSIKLGAFEFVSKPVIPEEFKLVIENALNSPL 120
Query: 145 VDPKDQNRS 153
+D + RS
Sbjct: 121 IDSTKERRS 129
>gi|254422502|ref|ZP_05036220.1| response regulator receiver domain protein [Synechococcus sp. PCC
7335]
gi|196189991|gb|EDX84955.1| response regulator receiver domain protein [Synechococcus sp. PCC
7335]
Length = 676
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
MR+L V+DD++ KIL K L + Y V V +++ + N+DL+I DV +P++D
Sbjct: 1 MRILLVEDDESVAKILHKVLTDEHYIVDVAYTGHIGWQLV--SSFNYDLIILDVLLPELD 58
Query: 84 GFKLLE-LVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
G K + L E LPV+ ++A D+ + G+N GA DY+ KP +EEL + ++RR
Sbjct: 59 GIKFCQQLRAQEYTLPVLFVTALDDSSEKIAGLNAGADDYITKPFELEELLARVRALLRR 118
Query: 143 KK 144
K
Sbjct: 119 GK 120
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++LAVDDD L+ L+ L Y++ ++ + K L++ N DL++ D+ MP G
Sbjct: 540 KILAVDDDSQLLQTLKTRLALENYQIVTLDKPLEFWKTLQD--ENPDLLLLDISMPQFTG 597
Query: 85 FKLLELVGLE---MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIR 141
+L + V LP+V +A+++ L G + + K + +L +H ++
Sbjct: 598 IELCQTVRRSPAWRHLPIVFFTAHAEPHLQQAAFKAGGDNLIEKSLSDAQLLAHLEHQMK 657
Query: 142 R 142
R
Sbjct: 658 R 658
>gi|153941052|ref|YP_001391293.1| DNA-binding response regulator [Clostridium botulinum F str.
Langeland]
gi|384462308|ref|YP_005674903.1| DNA-binding response regulator [Clostridium botulinum F str.
230613]
gi|152936948|gb|ABS42446.1| DNA-binding response regulator [Clostridium botulinum F str.
Langeland]
gi|295319325|gb|ADF99702.1| DNA-binding response regulator [Clostridium botulinum F str.
230613]
Length = 221
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+L V+DD I+ + L+E Y V V + A++M R R NFDL+I DV +P +DG
Sbjct: 4 RILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFR--RGNFDLIILDVMLPKIDG 61
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
F + E++ E +P++ML+A + + MKG DY+ KP + L + V+RR
Sbjct: 62 FVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA- 120
Query: 145 VDPKDQNRSPHEFEK 159
+ ++N S FE+
Sbjct: 121 -NGLEENNSTLTFEE 134
>gi|168059575|ref|XP_001781777.1| predicted protein [Physcomitrella patens subsp. patens]
gi|55669163|gb|AAV54520.1| golden 2-like protein 1 [Physcomitrella patens]
gi|162666779|gb|EDQ53425.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 511
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 48/69 (69%)
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
+KK +V WT ELH +F+ AV LG++KA P +IL+LM V+ LTR N+ASHLQK+R +
Sbjct: 220 KKKAKVDWTPELHRRFVHAVEQLGVEKAFPSRILELMGVQCLTRHNIASHLQKYRSHRRH 279
Query: 249 LGNKTLEAG 257
L + EA
Sbjct: 280 LAAREAEAA 288
>gi|327533492|gb|AEA92684.1| TOC1 [Phaseolus vulgaris]
Length = 561
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 79/146 (54%), Gaps = 7/146 (4%)
Query: 5 EKGGSSSDE--DGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKM 62
E GG + + DG ID+ + R+L D+D + + L C Y+VT+ +
Sbjct: 12 ESGGGNHGKSGDGFIDRSKV--RILLCDNDSNSSQEVFTLLLGCSYQVTLVKSPRQVIDA 69
Query: 63 LRENRNNFDLVISDVYMPDMDGFKLLELVGLEMD---LPVVMLSAYSDTKLVMKGINHGA 119
L + ++++++ +P G K+L+ + + + +PV+M+SA + +V+K + GA
Sbjct: 70 LNAEGQHIGIILAELDLPTKKGMKMLKYIARDKEFRRIPVIMMSAQDEVSVVVKCLRLGA 129
Query: 120 CDYLLKPVRMEELKNTWQHVIRRKKV 145
DYL+KP+R EL N W H+ R+++
Sbjct: 130 ADYLVKPLRTNELLNLWMHMWGRRRM 155
>gi|423427962|ref|ZP_17404992.1| hypothetical protein IE5_05650 [Bacillus cereus BAG3X2-2]
gi|401107384|gb|EJQ15333.1| hypothetical protein IE5_05650 [Bacillus cereus BAG3X2-2]
Length = 228
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L V+DDQ +++++FL QY+V V + + +K N+ +FDL++ DV MP+++GF
Sbjct: 13 ILVVEDDQEIQELIKQFLMTQQYKVIVASDGLEGMKQF--NKQSFDLILLDVMMPNLNGF 70
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
++ +++ + ++P++ML+A + + MKG + G DY+ KP L + V+RR
Sbjct: 71 EVAKMIRSQSNIPIIMLTALEEEQDQMKGFDLGIDDYITKPFSFHVLMRRVEAVLRR 127
>gi|219849054|ref|YP_002463487.1| winged helix family two component transcriptional regulator
[Chloroflexus aggregans DSM 9485]
gi|219543313|gb|ACL25051.1| two component transcriptional regulator, winged helix family
[Chloroflexus aggregans DSM 9485]
Length = 247
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Query: 17 IDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISD 76
+D+ P R+L DDD + ++++ L QYE V + AL+ +R FDLV D
Sbjct: 14 VDQPPPKRRILVADDDPSIGRLIQTALPAQQYETVVVANGMEALEAF--DRGQFDLVFLD 71
Query: 77 VYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTW 136
V MP +DGF E + + D+P+V+++A T +++G GA +Y+ KP R+ E
Sbjct: 72 VMMPFVDGFDACERIRAKSDVPIVIITARDGTDDIVQGFRRGADEYITKPFRVAEFVARV 131
Query: 137 QHVIRR 142
+ ++RR
Sbjct: 132 EAILRR 137
>gi|387818191|ref|YP_005678536.1| two-component response regulator [Clostridium botulinum H04402 065]
gi|322806233|emb|CBZ03801.1| two-component response regulator [Clostridium botulinum H04402 065]
Length = 221
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+L V+DD I+ + L+E Y V V + A++M R R NFDL+I DV +P +DG
Sbjct: 4 RILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFR--RGNFDLIILDVMLPKIDG 61
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
F + E++ E +P++ML+A + + MKG DY+ KP + L + V+RR
Sbjct: 62 FVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSISLLIKRVEAVLRRA- 120
Query: 145 VDPKDQNRSPHEFEK 159
+ ++N S FE+
Sbjct: 121 -NGLEENNSTLTFEE 134
>gi|423531708|ref|ZP_17508133.1| hypothetical protein IGE_05240 [Bacillus cereus HuB1-1]
gi|402443436|gb|EJV75338.1| hypothetical protein IGE_05240 [Bacillus cereus HuB1-1]
Length = 228
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L V+DDQ +++++FL QY+V V + + +K N+ +FDL++ DV MP+++GF
Sbjct: 13 ILVVEDDQEIQELIKQFLMTQQYKVIVASDGLEGMKQF--NKQSFDLILLDVMMPNLNGF 70
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
++ +++ + ++P++ML+A + + MKG + G DY+ KP L + V+RR
Sbjct: 71 EVAKMIRSQSNIPIIMLTALEEEQDQMKGFDLGIDDYITKPFSFHVLMRRVEAVLRR 127
>gi|423439269|ref|ZP_17416209.1| hypothetical protein IE9_05409 [Bacillus cereus BAG4X12-1]
gi|401113905|gb|EJQ21772.1| hypothetical protein IE9_05409 [Bacillus cereus BAG4X12-1]
Length = 221
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L V+DDQ +++++FL QY+V V + + +K N+ +FDL++ DV MP+++GF
Sbjct: 6 ILVVEDDQEIQELIKQFLMTQQYKVIVASDGLEGMKQF--NKQSFDLILLDVMMPNLNGF 63
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
++ +++ + ++P++ML+A + + MKG + G DY+ KP L + V+RR
Sbjct: 64 EVAKMIRSQSNIPIIMLTALEEEQDQMKGFDLGIDDYITKPFSFHVLMRRVEAVLRR 120
>gi|224122790|ref|XP_002330480.1| predicted protein [Populus trichocarpa]
gi|222871892|gb|EEF09023.1| predicted protein [Populus trichocarpa]
Length = 423
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 186 STTQKKPRVVWTTELHTKFIGAVNLL-GLDKAVPKKILDLMNVEGLTRENVASHLQKFRL 244
S+T KPR+ WTTELH +F+ AVN L G +KA PK +L LMNVEGLT +V SHLQK+RL
Sbjct: 197 SSTAHKPRMRWTTELHERFLDAVNKLDGAEKATPKGVLKLMNVEGLTIYHVKSHLQKYRL 256
Query: 245 S 245
+
Sbjct: 257 A 257
>gi|422978789|ref|ZP_16977772.1| transcriptional regulatory protein zraR [Escherichia coli TA124]
gi|371592409|gb|EHN81315.1| transcriptional regulatory protein zraR [Escherichia coli TA124]
Length = 441
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+++RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALELVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|423387500|ref|ZP_17364753.1| hypothetical protein ICE_05243 [Bacillus cereus BAG1X1-2]
gi|401628352|gb|EJS46197.1| hypothetical protein ICE_05243 [Bacillus cereus BAG1X1-2]
Length = 228
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L V+DDQ +++++FL QY+V V + + +K N+ +FDL++ DV MP+++GF
Sbjct: 13 ILVVEDDQEIQELIKQFLMTQQYKVIVASDGLEGMKQF--NKQSFDLILLDVMMPNLNGF 70
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
++ +++ + ++P++ML+A + + MKG + G DY+ KP L + V+RR
Sbjct: 71 EVAKMIRSQSNIPIIMLTALEEEQDQMKGFDLGIDDYITKPFSFHVLMRRVEAVLRR 127
>gi|226949267|ref|YP_002804358.1| DNA-binding response regulator [Clostridium botulinum A2 str.
Kyoto]
gi|226844404|gb|ACO87070.1| DNA-binding response regulator [Clostridium botulinum A2 str.
Kyoto]
Length = 221
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+L V+DD I+ + L+E Y V V + A++M R R NFDL+I DV +P +DG
Sbjct: 4 RILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFR--RGNFDLIILDVMLPKIDG 61
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
F + E++ E +P++ML+A + + MKG DY+ KP + L + V+RR
Sbjct: 62 FVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA- 120
Query: 145 VDPKDQNRSPHEFEK 159
+ ++N S FE+
Sbjct: 121 -NGLEENNSTLTFEE 134
>gi|423602680|ref|ZP_17578679.1| hypothetical protein III_05481 [Bacillus cereus VD078]
gi|423665149|ref|ZP_17640310.1| hypothetical protein IKM_05429 [Bacillus cereus VDM022]
gi|401224702|gb|EJR31255.1| hypothetical protein III_05481 [Bacillus cereus VD078]
gi|401291116|gb|EJR96799.1| hypothetical protein IKM_05429 [Bacillus cereus VDM022]
Length = 228
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L V+DDQ +++++FL QY+V V + + +K N+ +FDL++ DV MP+++GF
Sbjct: 13 ILVVEDDQEIQELIKQFLMTQQYKVIVASDGLEGMKQF--NKQSFDLILLDVMMPNLNGF 70
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
++ +++ + ++P++ML+A + + MKG + G DY+ KP L + V+RR
Sbjct: 71 EVAKMIRSQSNIPIIMLTALEEEQDQMKGFDLGIDDYITKPFSFHVLMRRVEAVLRR 127
>gi|113474512|ref|YP_720573.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
gi|110165560|gb|ABG50100.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
Length = 1133
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
Query: 19 KFPIG-MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
K P G VL VDD+ +++L +L+ Y+VT AL L EN +NFDL++ DV
Sbjct: 716 KIPNGDFHVLVVDDEPINIQVLNNYLKANNYQVTQALSGKEALAAL-ENNHNFDLILLDV 774
Query: 78 YMPDMDGFKLLELVGLEM---DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKN 134
MP+M G+++ + + LPV+ML+A + ++ G GA DYL KP +EL
Sbjct: 775 MMPNMSGYEVCSQIREKYPAQSLPVLMLTAKNQIADLVMGFQFGANDYLTKPFAKDELLT 834
Query: 135 TWQHVIRRKKVDPKDQNRSPHEF 157
Q I+ K+ + PHE+
Sbjct: 835 RIQTHIKLSKITKAYERFVPHEY 857
>gi|116626896|ref|YP_829052.1| Fis family transcriptional regulator [Candidatus Solibacter
usitatus Ellin6076]
gi|116230058|gb|ABJ88767.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Candidatus Solibacter usitatus Ellin6076]
Length = 457
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 78/128 (60%), Gaps = 5/128 (3%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD L L + R +E TV + A AL++++ FD+++SDV MP DG
Sbjct: 4 LLIVDDDANTLASLARAFRLAGHEATVCDNASRALELVKGQ--GFDMMLSDVVMPGKDGL 61
Query: 86 KLLELV-GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
LLE V GL + LPVVM+S ++ ++ ++ GA D+L KP+ ++L T +V++ K+
Sbjct: 62 TLLEEVRGLGITLPVVMISGQANIEMAVRATRLGAIDFLEKPLSTDKLLLTVDNVLKLKR 121
Query: 145 VDPKDQNR 152
++ D+NR
Sbjct: 122 LE--DENR 127
>gi|187779416|ref|ZP_02995889.1| hypothetical protein CLOSPO_03012 [Clostridium sporogenes ATCC
15579]
gi|187773041|gb|EDU36843.1| response regulator receiver domain protein [Clostridium sporogenes
ATCC 15579]
Length = 221
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+L V+DD I+ + L+E Y V V + A++M RE NFDL+I DV +P +DG
Sbjct: 4 RILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFREG--NFDLIILDVMLPKIDG 61
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
F + E++ E +P++ML+A + + MKG DY+ KP + L + V+RR
Sbjct: 62 FVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA- 120
Query: 145 VDPKDQNRSPHEFEK 159
+ ++N S FE+
Sbjct: 121 -NGLEENNSTLTFEE 134
>gi|423525563|ref|ZP_17502035.1| hypothetical protein IGC_04945 [Bacillus cereus HuA4-10]
gi|423596053|ref|ZP_17572082.1| hypothetical protein IIG_04919 [Bacillus cereus VD048]
gi|401166843|gb|EJQ74142.1| hypothetical protein IGC_04945 [Bacillus cereus HuA4-10]
gi|401220831|gb|EJR27460.1| hypothetical protein IIG_04919 [Bacillus cereus VD048]
Length = 221
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L V+DDQ +++++FL QY+V V + + +K N+ +FDL++ DV MP+++GF
Sbjct: 6 ILVVEDDQEIQELIKQFLMTQQYKVIVASDGLEGMKQF--NKQSFDLILLDVMMPNLNGF 63
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
++ +++ + ++P++ML+A + + MKG + G DY+ KP L + V+RR
Sbjct: 64 EVAKMIRSQSNIPIIMLTALEEEQDQMKGFDLGIDDYITKPFSFHVLMRRVEAVLRR 120
>gi|242051445|ref|XP_002454868.1| hypothetical protein SORBIDRAFT_03g000400 [Sorghum bicolor]
gi|241926843|gb|EER99987.1| hypothetical protein SORBIDRAFT_03g000400 [Sorghum bicolor]
Length = 497
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
N+NS ++K V WT ELH +F+ AV LG+DKAVP +IL++M ++ LTR N+ASHLQK+
Sbjct: 190 NKNSHGKRK--VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGMDCLTRHNIASHLQKY 247
Query: 243 RLSLKRLGNKTLEAGMVA 260
R K L + EA A
Sbjct: 248 RSHRKHLMAREPEAATWA 265
>gi|114331551|ref|YP_747773.1| two component transcriptional regulator, winged helix family
protein [Nitrosomonas eutropha C91]
gi|114308565|gb|ABI59808.1| two component transcriptional regulator, winged helix family
[Nitrosomonas eutropha C91]
Length = 223
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
MR+L V+DD +++ L Y V V N A +A LR+ NFDLV+ D+ +PDMD
Sbjct: 1 MRILVVEDDSLVASGIKQGLINAGYTVDVANTAGSAEIHLRDE--NFDLVVVDIGLPDMD 58
Query: 84 GFKLLE-LVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
G L++ L +M LPV++L+A + + G++ GA DY++KP R+ EL + +IRR
Sbjct: 59 GLMLVQRLRNRQMRLPVLVLTARGSMEDTIAGLDVGADDYMVKPFRLPELAARIRALIRR 118
>gi|124003289|ref|ZP_01688139.1| two-component hybrid sensor and regulator [Microscilla marina ATCC
23134]
gi|123991387|gb|EAY30818.1| two-component hybrid sensor and regulator [Microscilla marina ATCC
23134]
Length = 1269
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+++L VDD+ L++LE L Y +T + + ALK+++E++ FD+++ DV MP M
Sbjct: 885 VKILVVDDEPVNLQVLENHLSIQNYNITQASDGLKALKIIKESKEPFDIILLDVMMPKMS 944
Query: 84 GFKLLELVGLE---MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPV-RMEELKNTWQHV 139
G+++ + ++LPV+ML+A + K +++G + GA DYL KP ++E L HV
Sbjct: 945 GYEVCRTIRERFPLVELPVLMLTAKNQPKDIVEGFDAGANDYLTKPFSKVELLSRIKTHV 1004
Query: 140 I 140
+
Sbjct: 1005 L 1005
>gi|423619815|ref|ZP_17595647.1| hypothetical protein IIO_05139 [Bacillus cereus VD115]
gi|401250769|gb|EJR57059.1| hypothetical protein IIO_05139 [Bacillus cereus VD115]
Length = 221
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L V+DDQ +++++FL QY+V V + + +K N+ +FDL++ DV MP+++GF
Sbjct: 6 ILVVEDDQEIQELIKQFLMTQQYKVIVASDGLEGMKQF--NKQSFDLILLDVMMPNLNGF 63
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
++ +++ + ++P++ML+A + + MKG + G DY+ KP L + V+RR
Sbjct: 64 EVAKMIRSQSNIPIIMLTALEEEQDQMKGFDLGIDDYITKPFSFHVLMRRVEAVLRR 120
>gi|75761320|ref|ZP_00741297.1| Two-component response regulator vanRB [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74491192|gb|EAO54431.1| Two-component response regulator vanRB [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 228
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L V+DDQ +++++FL QY+V V + + +K N+ +FDL++ DV MP+++GF
Sbjct: 13 ILVVEDDQEIQELIKQFLMTQQYKVIVASDGLEGMKQF--NKQSFDLILLDVMMPNLNGF 70
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
++ +++ + ++P++ML+A + + MKG + G DY+ KP L + V+RR
Sbjct: 71 EVAKMIRSQSNIPIIMLTALEEEQDQMKGFDLGIDDYITKPFSFHVLMRRVEAVLRR 127
>gi|356549890|ref|XP_003543323.1| PREDICTED: transcription activator GLK1-like [Glycine max]
Length = 436
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 51/73 (69%)
Query: 185 NSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRL 244
N+ ++K +V WT ELH +F+ AV LG+DKAVP +IL++M ++ LTR N+ASHLQK+R
Sbjct: 159 NNQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRS 218
Query: 245 SLKRLGNKTLEAG 257
K L + EA
Sbjct: 219 HRKHLLAREAEAA 231
>gi|147861344|emb|CAN83993.1| hypothetical protein VITISV_039545 [Vitis vinifera]
Length = 191
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 80/147 (54%), Gaps = 21/147 (14%)
Query: 2 TAEEKGGSSSDEDGVIDKFP----IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAI 57
+A+ +G SD++ +D + + RVL V++D + ++ LR C Y+VT T+ +
Sbjct: 32 SADGEGDDVSDDEESMDCYEALVLMKSRVLLVENDDSTRYVIGALLRNCGYQVTETSNGL 91
Query: 58 TALKMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINH 117
A ++L++ N+ DLV+++V +P + ++S LV+K ++
Sbjct: 92 QAWRILKDXSNHIDLVLTEVNLPRLS-----------------VMSTXDSGALVLKCLSK 134
Query: 118 GACDYLLKPVRMEELKNTWQHVIRRKK 144
GA D+L+KP R ELK WQH+ RR++
Sbjct: 135 GATDFLVKPXRKNELKFLWQHIWRRRQ 161
>gi|346308873|ref|ZP_08850978.1| hypothetical protein HMPREF9457_02687 [Dorea formicigenerans
4_6_53AFAA]
gi|345901952|gb|EGX71748.1| hypothetical protein HMPREF9457_02687 [Dorea formicigenerans
4_6_53AFAA]
Length = 233
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
+VL +DDD+ +++K + + V I L +L E++N L+I D+ MPD+DG
Sbjct: 3 KVLIIDDDKELCTLMKKCVEQENLTAVVAGGGIEGLHILEESKNACSLIILDIMMPDLDG 62
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
F++L+ + ++PV+ML+A SD + + G+ GA DYL KP + EL +IRR
Sbjct: 63 FQVLQQIRQTSNVPVLMLTAKSDEEDKVSGLRMGADDYLTKPFSINELMARVNSLIRR 120
>gi|407703115|ref|YP_006816263.1| Two-component response regulator vanRB [Bacillus thuringiensis
MC28]
gi|407387530|gb|AFU18024.1| Two-component response regulator vanRB [Bacillus thuringiensis
MC28]
Length = 228
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L V+DDQ +++++FL QY+V V + + +K N+ +FDL++ DV MP+++GF
Sbjct: 13 ILVVEDDQEIQELIKQFLMTQQYKVIVASDGLEGMKQF--NKQSFDLILLDVMMPNLNGF 70
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
++ +++ + ++P++ML+A + + MKG + G DY+ KP L + V+RR
Sbjct: 71 EVAKMIRSQSNIPIIMLTALEEEQDQMKGFDLGIDDYITKPFSFHVLMRRVEAVLRR 127
>gi|291543087|emb|CBL16197.1| Response regulators consisting of a CheY-like receiver domain and a
winged-helix DNA-binding domain [Ruminococcus bromii
L2-63]
gi|291549580|emb|CBL25842.1| Response regulators consisting of a CheY-like receiver domain and a
winged-helix DNA-binding domain [Ruminococcus torques
L2-14]
Length = 233
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 71/117 (60%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
VL +DDD+ +++K + + V + + L++L EN++ L+I DV MPDM+GF
Sbjct: 4 VLIIDDDKELCTLMKKCVEQENLSAVVAHGGLEGLRLLEENKDTCSLIILDVMMPDMNGF 63
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
++L+ + + ++PV+ML+A SD + + G+ GA DYL KP + EL +IRR
Sbjct: 64 QVLQEIRKKNNVPVLMLTAKSDEEDKVSGLRLGADDYLTKPFGINELMARVNSLIRR 120
>gi|381149245|gb|AFF60405.1| golden 2-like 1 transcription factor [Capsicum annuum]
Length = 447
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%)
Query: 185 NSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRL 244
N ++K +V WT ELH +F+ AV LG+DKAVP +IL++M ++ LTR N+ASHLQK+R
Sbjct: 156 NLPVKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRS 215
Query: 245 SLKRLGNKTLEAG 257
K L + EA
Sbjct: 216 HRKHLLAREAEAA 228
>gi|82778820|ref|YP_405169.1| transcriptional regulatory protein ZraR [Shigella dysenteriae
Sd197]
gi|309783961|ref|ZP_07678606.1| transcriptional regulatory protein zraR [Shigella dysenteriae 1617]
gi|81242968|gb|ABB63678.1| sensor HydH response regulator of hydrogenase 3 activity [Shigella
dysenteriae Sd197]
gi|308928332|gb|EFP73794.1| transcriptional regulatory protein zraR [Shigella dysenteriae 1617]
Length = 441
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSERQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L+ +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALKPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|32489917|emb|CAE05509.1| OSJNBa0038P21.2 [Oryza sativa Japonica Group]
gi|125589971|gb|EAZ30321.1| hypothetical protein OsJ_14368 [Oryza sativa Japonica Group]
Length = 380
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 38/227 (16%)
Query: 32 DQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGFKLLELV 91
D TC I + + VTV I AL L+ LV++DV M +M+GF+ L++
Sbjct: 25 DSTCSMICTQL----NFCVTVFTSPIKALDFLQNQAEGVHLVLADVQMEEMNGFEFLKVA 80
Query: 92 -GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH----VIRRKKVD 146
L + V+M+S + + + + GA + KP+ + ++N WQH V++ +K+
Sbjct: 81 RELHKSIQVIMMSTETTIYTMKRCVQLGAQILVKKPLDVVTIQNLWQHLDIKVLKMEKIK 140
Query: 147 PK-----DQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELH 201
D++ +E + EN+ T++K ++WT L
Sbjct: 141 DMLQGVGDKSTCANEM--------------------NSFPENQKDGTKRKYYLMWTPHLQ 180
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
KF+ A+ +LG + L +M+V+ + R+ +++HLQK RL LK+
Sbjct: 181 KKFLHALEILGEGQIS----LMIMDVDNIDRKQISTHLQKHRLQLKK 223
>gi|125547838|gb|EAY93660.1| hypothetical protein OsI_15446 [Oryza sativa Indica Group]
Length = 380
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 38/227 (16%)
Query: 32 DQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGFKLLELV 91
D TC I + + VTV I AL L+ LV++DV M +M+GF+ L++
Sbjct: 25 DSTCSMICTQL----NFCVTVFTSPIKALDFLQNQAEGVHLVLADVQMEEMNGFEFLKVA 80
Query: 92 -GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH----VIRRKKVD 146
L + V+M+S + + + + GA + KP+ + ++N WQH V++ +K+
Sbjct: 81 RELHKSIQVIMMSTETTIYTMKRCVQLGAQILVKKPLDVVTIQNLWQHLDIKVLKMEKIK 140
Query: 147 PK-----DQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELH 201
D++ +E + EN+ T++K ++WT L
Sbjct: 141 DMLQGVGDKSTCANEM--------------------NSFPENQKDGTKRKYYLMWTPHLQ 180
Query: 202 TKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
KF+ A+ +LG + L +M+V+ + R+ +++HLQK RL LK+
Sbjct: 181 KKFLHALEILGEGQIS----LMIMDVDNIDRKQISTHLQKHRLQLKK 223
>gi|330447454|ref|ZP_08311103.1| HAMP domain protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328491645|dbj|GAA05600.1| HAMP domain protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 1114
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
P G +L VDD+ L+IL FLR Y V AL M+ E R DL++ D+ MP
Sbjct: 702 PNGDLILVVDDEPVNLQILNNFLRLAGYRVKTAENGPQALAMVEEQRP--DLILLDIMMP 759
Query: 81 DMDGFKLLELVGLE---MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
+M G+++ ++ + +LP++MLSA + +KG GA DYL KP EEL Q
Sbjct: 760 EMSGYEVCTILRKQYSIFELPIMMLSALGQIQDRIKGFECGANDYLTKPFNKEELIARIQ 819
Query: 138 HVIRRKKVDPKDQ 150
++ K + + Q
Sbjct: 820 AYLQASKTEHEKQ 832
>gi|224126555|ref|XP_002329583.1| predicted protein [Populus trichocarpa]
gi|222870292|gb|EEF07423.1| predicted protein [Populus trichocarpa]
Length = 549
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 165 KDQDGEDEDEDGDDDGH-ENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILD 223
+++D + D D H N +KK +V WT ELH KF+ V LG+D+A+P ++L+
Sbjct: 282 QNKDSLNHSNDVASDLHTSNGTRANRKKMKVDWTPELHKKFVQVVEKLGVDQAIPSRVLE 341
Query: 224 LMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHS 283
LM VE LTR NVASHLQK+R+ + + K + SY + + HS
Sbjct: 342 LMKVESLTRHNVASHLQKYRMRRRPILPKEDDRRWPHHREQVQRSYYPYKPIMAYPPYHS 401
Query: 284 ----VNSP-----GRLSSSALS------SSYVPGSMIGRLNSSAGLSMHGIASSGMIKPG 328
+P G S S SY+P + L MH A + P
Sbjct: 402 NHDLPTNPVYPMWGATGSHTASMHTWGTPSYLPWPPTEIWHRKPYLGMHADAWGCPVMPP 461
Query: 329 LSQSFNT 335
L F++
Sbjct: 462 LHSPFSS 468
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+ VL +D+D + ++ L Y V AL + +F + I +V
Sbjct: 14 FPKGLSVLLLDEDNSSAAEIKSKLEALDYIVYTFCNENEALLAISNEPGSFHVAIVEVST 73
Query: 80 PDMDG-FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
+ +G FK LE DLP +M S +MK I GA ++L KP+ ++L+N WQH
Sbjct: 74 SNSNGSFKFLETAK---DLPTIMTSNIHCLNTMMKCIALGAVEFLRKPLSEDKLRNIWQH 130
Query: 139 VIRR 142
V+ +
Sbjct: 131 VVHK 134
>gi|373957995|ref|ZP_09617955.1| two component transcriptional regulator, winged helix family
[Mucilaginibacter paludis DSM 18603]
gi|373894595|gb|EHQ30492.1| two component transcriptional regulator, winged helix family
[Mucilaginibacter paludis DSM 18603]
Length = 228
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 78/121 (64%), Gaps = 5/121 (4%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
M VL V+D+ + ++++ L + +E++V +TAL+M +++ FDLVI DV +P MD
Sbjct: 1 MAVLLVEDEPNIVSVIKRGLADFGFEISVATDGLTALQMTIDHQ--FDLVILDVMLPSMD 58
Query: 84 GFKLLELVGLEMD--LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIR 141
G +L + + E D +P++ML+A T+ ++ G+N GA DY++KP +M EL + ++R
Sbjct: 59 GIQLCKHIR-ERDENIPILMLTALDSTENIVTGLNSGADDYMVKPFKMIELATRLKTLLR 117
Query: 142 R 142
R
Sbjct: 118 R 118
>gi|147807228|emb|CAN70741.1| hypothetical protein VITISV_022754 [Vitis vinifera]
Length = 165
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%), Gaps = 21/147 (14%)
Query: 2 TAEEKGGSSSDEDGVIDKFP----IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAI 57
+A+ +G SD++ +D + + RVL V++D + ++ LR C Y+VT T+ +
Sbjct: 32 SADGEGDDVSDDEESMDCYEALVLMKSRVLLVENDDSTRYVIGALLRNCGYQVTETSNGL 91
Query: 58 TALKMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINH 117
A ++L++ N+ DLV+++V +P + ++S LV+K ++
Sbjct: 92 QAWRILKDASNHIDLVLTEVNLPRLS-----------------VMSTDDSGALVLKCLSK 134
Query: 118 GACDYLLKPVRMEELKNTWQHVIRRKK 144
GA D+L+KP+R ELK WQH+ RR++
Sbjct: 135 GATDFLVKPIRKNELKFLWQHIWRRRQ 161
>gi|295102996|emb|CBL00540.1| Response regulators consisting of a CheY-like receiver domain and a
winged-helix DNA-binding domain [Faecalibacterium
prausnitzii SL3/3]
Length = 233
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 72/117 (61%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
VL +DDD+ +++K + + V + + L++L +N++ + L+I DV MPDM+GF
Sbjct: 4 VLIIDDDKELCTLMKKCVEQENLSAVVAHGGLEGLRLLEKNKDTYSLIILDVMMPDMNGF 63
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
++L+ + + ++PV+ML+A SD + + G+ GA DYL KP + EL +IRR
Sbjct: 64 QVLQKIREKNNVPVLMLTAKSDEEDKVSGLRLGADDYLTKPFGINELIARVNSLIRR 120
>gi|408417731|ref|YP_006759145.1| response regulator protein [Desulfobacula toluolica Tol2]
gi|405104944|emb|CCK78441.1| response regulator protein [Desulfobacula toluolica Tol2]
Length = 672
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 78/128 (60%), Gaps = 1/128 (0%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+L VDD+++ +K+ +K L Y+V+ +I ALK R + FDLVI+D+ MP+M G
Sbjct: 542 RILLVDDEESIIKMEKKILERLGYQVSSHISSIEALKTFRAAPDTFDLVITDMAMPNMSG 601
Query: 85 FKL-LELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK 143
+L +EL+ + D+P+++ + +++T K ++ G L+KP+ M+EL V+ +
Sbjct: 602 DRLSVELMKIRTDIPILLCTGFNETISEKKVVSLGIKGLLIKPIAMKELSKKICEVLDKI 661
Query: 144 KVDPKDQN 151
K++ Q+
Sbjct: 662 KIESPKQH 669
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPD 81
+G R+L +DD ++++ LR+ Y V++ L ++++++ DL++ D+ MP+
Sbjct: 7 MGNRILIIDDGLKNIQLIGTVLRDKGYAVSIAQSGSQGLNVIQQDKP--DLILLDIMMPE 64
Query: 82 MDGFKLLELVGLE---MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEEL 132
MDGF+ + ++PV+ LSA +DT ++G GA DY+ KPV EEL
Sbjct: 65 MDGFETCRRLKKNPEVKNIPVIFLSALTDTVNKVEGFKIGAVDYITKPVNAEEL 118
>gi|255568149|ref|XP_002525050.1| Two-component response regulator ARR2, putative [Ricinus communis]
gi|223535631|gb|EEF37297.1| Two-component response regulator ARR2, putative [Ricinus communis]
Length = 659
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 50 VTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGFKLLELV---GLEMDLPVVMLSAYS 106
VT + A K+L + N+ DL++S+V MP + G LL + ++PV+M+S++
Sbjct: 3 VTAVANGLQAWKLLEDLTNHIDLILSEVAMPCLSGIGLLCKIMNHRTCKNIPVIMMSSHD 62
Query: 107 DTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
+V K ++ GA D+L+KP+R ELKN WQHV R+
Sbjct: 63 SMNVVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
>gi|159900549|ref|YP_001546796.1| two component transcriptional regulator [Herpetosiphon aurantiacus
DSM 785]
gi|159893588|gb|ABX06668.1| two component transcriptional regulator, winged helix family
[Herpetosiphon aurantiacus DSM 785]
Length = 248
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 28/170 (16%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D P ++L DDD L+++E L +Y++ + + ALKM R+ + L++ DV
Sbjct: 13 DNNPHQRKILVADDDPAILRLVEVALSGQRYQLVTVSNGLEALKMYRDG--EYQLLLIDV 70
Query: 78 YMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
MP +DGF + E + D+P+++++A T V+ G GA DY+ KP R EL+ +
Sbjct: 71 MMPYIDGFTVTERIRARSDVPIIIITARDGTDDVVHGFELGADDYITKPFRTAELQARVE 130
Query: 138 HVIRR------KKVDP--------------------KDQNRSPHEFEKSY 161
+IRR +K P +D N +P EFE Y
Sbjct: 131 AIIRRVEGYQHRKASPIVRIGDLEIDEPRHKVLLAGEDVNLTPMEFELLY 180
>gi|414875562|tpg|DAA52693.1| TPA: golden plant2 [Zea mays]
Length = 459
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 179 DGHENENSTTQK-----KPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRE 233
+GH ++ + K K +V WT ELH +F+ AV LG+DKAVP +IL++M + LTR
Sbjct: 165 EGHSSKKKSAGKNSNGGKRKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGTDCLTRH 224
Query: 234 NVASHLQKFRLSLKRLGNKTLEAGMVA 260
N+ASHLQK+R K L + EA A
Sbjct: 225 NIASHLQKYRSHRKHLMAREAEAATWA 251
>gi|195607208|gb|ACG25434.1| transcription factor ZmGLK1 [Zea mays]
Length = 460
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%)
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
++K +V WT ELH +F+ AV LG+DKAVP +IL++M + LTR N+ASHLQK+R K
Sbjct: 181 KRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGTDCLTRHNIASHLQKYRSHRKH 240
Query: 249 LGNKTLEAGMVA 260
L + EA A
Sbjct: 241 LMAREAEAATWA 252
>gi|320160200|ref|YP_004173424.1| OmpR family two-component response regulator [Anaerolinea
thermophila UNI-1]
gi|319994053|dbj|BAJ62824.1| OmpR family two-component response regulator [Anaerolinea
thermophila UNI-1]
Length = 229
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDD + ++L+++L E Y V T +AL + R N DL++ D+ MP MDG+
Sbjct: 5 ILIVDDQSSVRQLLQEYLTEQGYRVLTTTDGQSALYIARHE--NPDLILLDIMMPRMDGY 62
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKV 145
+ L E PV++++A + + G++ GA DY++KP RM EL + ++RR +
Sbjct: 63 QFLRQFRQERQTPVIIITAREEETDAVLGLDLGADDYIIKPFRMRELAARIRAILRRGEE 122
Query: 146 DPKDQN 151
P Q
Sbjct: 123 HPDKQE 128
>gi|423369629|ref|ZP_17347059.1| hypothetical protein IC3_04728 [Bacillus cereus VD142]
gi|423514758|ref|ZP_17491264.1| hypothetical protein IG3_06230 [Bacillus cereus HuA2-1]
gi|401076553|gb|EJP84906.1| hypothetical protein IC3_04728 [Bacillus cereus VD142]
gi|402441823|gb|EJV73771.1| hypothetical protein IG3_06230 [Bacillus cereus HuA2-1]
Length = 228
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L V+DDQ +++++FL QY+V V + + +K N+ +FDL++ DV MP+++GF
Sbjct: 13 ILVVEDDQEIQELIKQFLMTQQYKVLVASDGLEGMKQF--NKQSFDLILLDVMMPNLNGF 70
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
++ +++ + ++P++ML+A + + MKG + G DY+ KP L + V+RR
Sbjct: 71 EVAKMIRSQSNIPIIMLTALEEEQDQMKGFDLGIDDYITKPFSFHVLMRRVEAVLRR 127
>gi|108864017|gb|ABG22374.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 620
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 10/149 (6%)
Query: 57 ITALKMLRENRNNFDLVISDVYMPDMDGFKLLELVGLE---MDLPVVMLSAYSDTKLVMK 113
+ A ++RE FDLV+++V MP + G +LL + ++PV+M+S+ V++
Sbjct: 1 MKAWGVMRERAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLR 60
Query: 114 GINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPK---DQNRSPHEFEKSYRKRKDQDGE 170
+ GA D+L+KPVR EL+N WQHV RR ++ + +N + + + GE
Sbjct: 61 CMQKGAVDFLVKPVRKNELRNLWQHVWRRHAMNSQTNASENNAASNHLSANGGNGSKTGE 120
Query: 171 DEDEDGDDDG----HENENSTTQKKPRVV 195
DE+ D E E + +K P VV
Sbjct: 121 HSDEESDAQSSGSKREVEIQSAEKLPEVV 149
>gi|162459635|ref|NP_001105513.1| golden plant2 [Zea mays]
gi|11177540|gb|AAG32325.1|AF298118_1 putative transcription factor Golden2 [Zea mays]
gi|13940494|gb|AAK50391.1|AF318579_1 putative transcription factor GOLDEN 2 [Zea mays]
gi|223946903|gb|ACN27535.1| unknown [Zea mays]
gi|414875563|tpg|DAA52694.1| TPA: golden plant2 [Zea mays]
Length = 461
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%)
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
++K +V WT ELH +F+ AV LG+DKAVP +IL++M + LTR N+ASHLQK+R K
Sbjct: 182 KRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGTDCLTRHNIASHLQKYRSHRKH 241
Query: 249 LGNKTLEAGMVA 260
L + EA A
Sbjct: 242 LMAREAEAATWA 253
>gi|312281493|dbj|BAJ33612.1| unnamed protein product [Thellungiella halophila]
Length = 288
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 6/89 (6%)
Query: 193 RVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNK 252
+V WT ELH +F+ AV LG++KAVP +IL+LM V LTR NVASHLQK+R K L +
Sbjct: 16 KVDWTAELHRRFVEAVEQLGVEKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKHLLAR 75
Query: 253 TLEAGMVASVGSKDSSYLRIGALDGFGGS 281
EA A+ K Y G LD GG+
Sbjct: 76 EAEA---ANWTRKRHIY---GGLDTTGGA 98
>gi|297519348|ref|ZP_06937734.1| transcriptional regulatory protein ZraR [Escherichia coli OP50]
Length = 239
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERV--FDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|195614160|gb|ACG28910.1| transcription factor ZmGLK1 [Zea mays]
Length = 461
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%)
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
++K +V WT ELH +F+ AV LG+DKAVP +IL++M + LTR N+ASHLQK+R K
Sbjct: 182 KRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGTDCLTRHNIASHLQKYRSHRKH 241
Query: 249 LGNKTLEAGMVA 260
L + EA A
Sbjct: 242 LMAREAEAATWA 253
>gi|170758276|ref|YP_001787361.1| DNA-binding response regulator [Clostridium botulinum A3 str. Loch
Maree]
gi|169405265|gb|ACA53676.1| DNA-binding response regulator [Clostridium botulinum A3 str. Loch
Maree]
Length = 221
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+L V+DD I+ + L+E Y V V + A++M R R FDL+I DV +P +DG
Sbjct: 4 RILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFR--RGEFDLIILDVMLPKIDG 61
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
F + E++ E +P++ML+A + + MKG DY++KP + L + V+RR
Sbjct: 62 FVVCEIIRKESSMPIIMLTALGEEEDEMKGFELKVDDYIIKPFSINLLIKRVEAVLRRA- 120
Query: 145 VDPKDQNRSPHEFEK 159
+ ++N S FE+
Sbjct: 121 -NGLEENNSTLTFEE 134
>gi|115484281|ref|NP_001065802.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|108864015|gb|ABG22372.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|108864016|gb|ABG22373.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|113644506|dbj|BAF27647.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|125576282|gb|EAZ17504.1| hypothetical protein OsJ_33036 [Oryza sativa Japonica Group]
gi|213959178|gb|ACJ54923.1| CCT motif family protein [Oryza sativa Japonica Group]
gi|218185285|gb|EEC67712.1| hypothetical protein OsI_35190 [Oryza sativa Indica Group]
Length = 623
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 10/149 (6%)
Query: 57 ITALKMLRENRNNFDLVISDVYMPDMDGFKLLELVGLE---MDLPVVMLSAYSDTKLVMK 113
+ A ++RE FDLV+++V MP + G +LL + ++PV+M+S+ V++
Sbjct: 1 MKAWGVMRERAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLR 60
Query: 114 GINHGACDYLLKPVRMEELKNTWQHVIRRKKVDPK---DQNRSPHEFEKSYRKRKDQDGE 170
+ GA D+L+KPVR EL+N WQHV RR ++ + +N + + + GE
Sbjct: 61 CMQKGAVDFLVKPVRKNELRNLWQHVWRRHAMNSQTNASENNAASNHLSANGGNGSKTGE 120
Query: 171 DEDEDGDDDG----HENENSTTQKKPRVV 195
DE+ D E E + +K P VV
Sbjct: 121 HSDEESDAQSSGSKREVEIQSAEKLPEVV 149
>gi|365102038|ref|ZP_09332576.1| transcriptional regulatory protein zraR [Citrobacter freundii
4_7_47CFAA]
gi|363646537|gb|EHL85779.1| transcriptional regulatory protein zraR [Citrobacter freundii
4_7_47CFAA]
Length = 441
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR YEV + AL+++RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYEVALAYSGRAALELVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++A+S + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAFSSVETAVEALKTGALDYLIKPLDFDRLQETLEKAL 121
>gi|386812842|ref|ZP_10100067.1| two-component response regulator [planctomycete KSU-1]
gi|386405112|dbj|GAB62948.1| two-component response regulator [planctomycete KSU-1]
Length = 464
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++L V+DD+ L + L + YEV + AL + R R ++DLVI+D+ MP MDG
Sbjct: 6 KILVVEDDEYVLGSIRILLNKEGYEVNTALNGLEALNLYR--RESYDLVIADLKMPQMDG 63
Query: 85 FKLLELVGLEM-DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK 143
+LL+ + LE D+ ++M++AY + ++ + GA DY+ KPV EE++ Q R+
Sbjct: 64 IELLKQLKLEFSDVSLIMMTAYGSIRTAVEAMKMGAYDYVTKPVSAEEIRLVIQRAFERQ 123
>gi|116872456|ref|YP_849237.1| chemotaxis protein CheY [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741334|emb|CAK20456.1| two-component response regulator, CheY family [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 220
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++L +DD T L ++ FL E Y+VT I A + + FDL+I D+ MP MDG
Sbjct: 3 KILIAEDDVTILGVITAFLTEAGYQVTTAQNGIEAYHFFQ--KEAFDLIIMDIMMPSMDG 60
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR-- 142
+ L EL+ P++M++A S+ +KG + GA DY+ KP L Q ++RR
Sbjct: 61 YTLTELIRSTSSAPILMMTALSEESDELKGFDLGADDYIQKPFSYLVLLKRVQVLLRRSN 120
Query: 143 -KKVDPK 148
K+VD K
Sbjct: 121 QKEVDKK 127
>gi|432576265|ref|ZP_19812730.1| transcriptional regulatory protein zraR [Escherichia coli KTE55]
gi|431103736|gb|ELE08373.1| transcriptional regulatory protein zraR [Escherichia coli KTE55]
Length = 193
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQV--FDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI-RRK 143
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L++T + +
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSIETAVEALKTGALDYLIKPLDFDNLQSTLEKALAHTH 125
Query: 144 KVDPKDQNRSPHEF 157
VD + S +F
Sbjct: 126 SVDAETPAVSASQF 139
>gi|300313830|ref|YP_003777922.1| response regulator protein [Herbaspirillum seropedicae SmR1]
gi|300076615|gb|ADJ66014.1| response regulator protein [Herbaspirillum seropedicae SmR1]
Length = 237
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++L VDDDQ +L+ +L + QYEV + + T L + + LVI DV +PD DG
Sbjct: 4 KILIVDDDQKTRTLLKAYLEKNQYEVRLAHDGATFLAEFQRLADELSLVILDVMLPDTDG 63
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
F L + V + ++PV+ML+A SD + G+ GA DY+ KP EL + + RR
Sbjct: 64 FALCKAVRRKSNVPVIMLTASSDETDRVVGLELGADDYIAKPYSPRELLARIKAIHRRIG 123
Query: 145 VD 146
+D
Sbjct: 124 ID 125
>gi|416344123|ref|ZP_11678023.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli EC4100B]
gi|320200155|gb|EFW74744.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli EC4100B]
Length = 441
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|300938770|ref|ZP_07153483.1| response regulator receiver domain protein, partial [Escherichia
coli MS 21-1]
gi|300456280|gb|EFK19773.1| response regulator receiver domain protein [Escherichia coli MS
21-1]
Length = 318
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|218781592|ref|YP_002432910.1| response regulator receiver modulated diguanylate cyclase
[Desulfatibacillum alkenivorans AK-01]
gi|218762976|gb|ACL05442.1| response regulator receiver modulated diguanylate cyclase
[Desulfatibacillum alkenivorans AK-01]
Length = 308
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
VL VDDD+ + L + + Y+ A +AL++L R+ +LV++D++MPDM+G
Sbjct: 11 VLIVDDDKPAREALYEMVLTAGYKAAAAPSAESALEIL--ARHPVELVLTDIHMPDMNGL 68
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKV 145
+L V D VV+L+ ++D+ + I GA D+LLKPVR+ ELK Q V R +++
Sbjct: 69 ELTAAVKERFDADVVVLTGFADSHTYEEAIGRGASDFLLKPVRLPELKARIQRVFRERRL 128
>gi|331670859|ref|ZP_08371694.1| transcriptional regulatory protein ZraR [Escherichia coli TA271]
gi|417269680|ref|ZP_12057040.1| transcriptional regulator ZraR [Escherichia coli 3.3884]
gi|423708316|ref|ZP_17682696.1| transcriptional regulatory protein zraR [Escherichia coli B799]
gi|432379243|ref|ZP_19622221.1| transcriptional regulatory protein zraR [Escherichia coli KTE12]
gi|432837058|ref|ZP_20070564.1| transcriptional regulatory protein zraR [Escherichia coli KTE136]
gi|331061947|gb|EGI33871.1| transcriptional regulatory protein ZraR [Escherichia coli TA271]
gi|385708544|gb|EIG45554.1| transcriptional regulatory protein zraR [Escherichia coli B799]
gi|386228485|gb|EII55841.1| transcriptional regulator ZraR [Escherichia coli 3.3884]
gi|430895085|gb|ELC17358.1| transcriptional regulatory protein zraR [Escherichia coli KTE12]
gi|431379932|gb|ELG64836.1| transcriptional regulatory protein zraR [Escherichia coli KTE136]
Length = 441
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|215489336|ref|YP_002331767.1| transcriptional regulatory protein ZraR [Escherichia coli O127:H6
str. E2348/69]
gi|312965342|ref|ZP_07779575.1| transcriptional regulatory protein zraR [Escherichia coli 2362-75]
gi|415838217|ref|ZP_11520200.1| transcriptional regulatory protein zraR [Escherichia coli RN587/1]
gi|417281801|ref|ZP_12069101.1| transcriptional regulator ZraR [Escherichia coli 3003]
gi|417758460|ref|ZP_12406517.1| response regulator [Escherichia coli DEC2B]
gi|418999510|ref|ZP_13547082.1| response regulator [Escherichia coli DEC1A]
gi|419004839|ref|ZP_13552343.1| response regulator [Escherichia coli DEC1B]
gi|419010524|ref|ZP_13557927.1| response regulator [Escherichia coli DEC1C]
gi|419016225|ref|ZP_13563556.1| transcriptional regulatory protein zraR [Escherichia coli DEC1D]
gi|419021152|ref|ZP_13568445.1| response regulator [Escherichia coli DEC1E]
gi|419026605|ref|ZP_13573813.1| transcriptional regulatory protein zraR [Escherichia coli DEC2A]
gi|419031776|ref|ZP_13578910.1| response regulator [Escherichia coli DEC2C]
gi|419037351|ref|ZP_13584418.1| response regulator [Escherichia coli DEC2D]
gi|419042457|ref|ZP_13589468.1| response regulator [Escherichia coli DEC2E]
gi|425280458|ref|ZP_18671667.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
ARS4.2123]
gi|425302921|ref|ZP_18692795.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
07798]
gi|215267408|emb|CAS11859.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma 54
interaction protein [Escherichia coli O127:H6 str.
E2348/69]
gi|312290016|gb|EFR17903.1| transcriptional regulatory protein zraR [Escherichia coli 2362-75]
gi|323190138|gb|EFZ75416.1| transcriptional regulatory protein zraR [Escherichia coli RN587/1]
gi|377838459|gb|EHU03577.1| response regulator [Escherichia coli DEC1C]
gi|377838485|gb|EHU03602.1| response regulator [Escherichia coli DEC1A]
gi|377840946|gb|EHU06015.1| response regulator [Escherichia coli DEC1B]
gi|377852391|gb|EHU17315.1| transcriptional regulatory protein zraR [Escherichia coli DEC1D]
gi|377855596|gb|EHU20465.1| response regulator [Escherichia coli DEC1E]
gi|377857003|gb|EHU21859.1| transcriptional regulatory protein zraR [Escherichia coli DEC2A]
gi|377869923|gb|EHU34624.1| response regulator [Escherichia coli DEC2B]
gi|377871540|gb|EHU36202.1| response regulator [Escherichia coli DEC2C]
gi|377873102|gb|EHU37741.1| response regulator [Escherichia coli DEC2D]
gi|377885205|gb|EHU49705.1| response regulator [Escherichia coli DEC2E]
gi|386246130|gb|EII87860.1| transcriptional regulator ZraR [Escherichia coli 3003]
gi|408196991|gb|EKI22263.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
ARS4.2123]
gi|408209863|gb|EKI34443.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
07798]
Length = 441
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|302817481|ref|XP_002990416.1| pseudo response regulator [Selaginella moellendorffii]
gi|300141801|gb|EFJ08509.1| pseudo response regulator [Selaginella moellendorffii]
Length = 592
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 49/70 (70%)
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
+KK +V WT ELH KF+ AV LG+DKA+P +IL+ M V+ LTR N+ASHLQK+R K
Sbjct: 348 RKKMKVDWTPELHQKFVQAVEQLGVDKAIPSRILEHMGVKCLTRHNIASHLQKYRSHRKH 407
Query: 249 LGNKTLEAGM 258
L + EA +
Sbjct: 408 LLQREAEAAV 417
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 4/124 (3%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+ VL D + + L+ C Y VT AL + + + F + D
Sbjct: 12 FPKGLHVLVAIADGDDREEISGILQSCSYRVTAFTSEEDALAAIEKPKTPFHAAMVDATN 71
Query: 80 PDM-DGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
D+ DGFK+LE +L V+M+S+ D + +M+ I+ GA D+L KP E+LKN WQH
Sbjct: 72 RDIFDGFKVLEAAK---ELAVIMISSTEDIETMMRAISLGAADFLQKPFSEEKLKNIWQH 128
Query: 139 VIRR 142
V R+
Sbjct: 129 VARK 132
>gi|293417506|ref|ZP_06660129.1| two-component system [Escherichia coli B185]
gi|417631493|ref|ZP_12281722.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_MHI813]
gi|422836700|ref|ZP_16884739.1| transcriptional regulatory protein zraR [Escherichia coli E101]
gi|432452277|ref|ZP_19694528.1| transcriptional regulatory protein zraR [Escherichia coli KTE193]
gi|432943798|ref|ZP_20140529.1| transcriptional regulatory protein zraR [Escherichia coli KTE196]
gi|433035942|ref|ZP_20223622.1| transcriptional regulatory protein zraR [Escherichia coli KTE112]
gi|433045541|ref|ZP_20233008.1| transcriptional regulatory protein zraR [Escherichia coli KTE117]
gi|291430833|gb|EFF03830.1| two-component system [Escherichia coli B185]
gi|345368897|gb|EGX00889.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_MHI813]
gi|371607555|gb|EHN96125.1| transcriptional regulatory protein zraR [Escherichia coli E101]
gi|430976435|gb|ELC93301.1| transcriptional regulatory protein zraR [Escherichia coli KTE193]
gi|431466309|gb|ELH46385.1| transcriptional regulatory protein zraR [Escherichia coli KTE196]
gi|431545179|gb|ELI19847.1| transcriptional regulatory protein zraR [Escherichia coli KTE112]
gi|431551590|gb|ELI25575.1| transcriptional regulatory protein zraR [Escherichia coli KTE117]
Length = 441
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|168179677|ref|ZP_02614341.1| DNA-binding response regulator [Clostridium botulinum NCTC 2916]
gi|182669403|gb|EDT81379.1| DNA-binding response regulator [Clostridium botulinum NCTC 2916]
Length = 221
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+L V+DD I+ + L+E Y V V + A++M R R NFDL++ DV +P +DG
Sbjct: 4 RILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFR--RGNFDLIVLDVMLPKIDG 61
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
F + E++ E +P++ML+A + + MKG DY+ KP + L + V+RR
Sbjct: 62 FVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA- 120
Query: 145 VDPKDQNRSPHEFEK 159
+ ++N S FE+
Sbjct: 121 -NGLEENNSTLTFEE 134
>gi|157163473|ref|YP_001460791.1| transcriptional regulatory protein ZraR [Escherichia coli HS]
gi|417149104|ref|ZP_11989195.1| transcriptional regulator ZraR [Escherichia coli 1.2264]
gi|157069153|gb|ABV08408.1| response regulator ZraR [Escherichia coli HS]
gi|386161325|gb|EIH23128.1| transcriptional regulator ZraR [Escherichia coli 1.2264]
Length = 441
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|419926576|ref|ZP_14444328.1| transcriptional regulatory protein ZraR [Escherichia coli 541-1]
gi|422764699|ref|ZP_16818444.1| sigma-54 interaction domain-containing protein [Escherichia coli
E1167]
gi|427807196|ref|ZP_18974263.1| response regulator of hydrogenase 3 activity (sensor HydH)
[Escherichia coli chi7122]
gi|427811795|ref|ZP_18978860.1| response regulator of hydrogenase 3 activity (sensor HydH)
[Escherichia coli]
gi|432752458|ref|ZP_19987033.1| transcriptional regulatory protein zraR [Escherichia coli KTE29]
gi|443615486|ref|YP_007379342.1| transcriptional regulatory protein ZraR [Escherichia coli APEC O78]
gi|324115436|gb|EGC09381.1| sigma-54 interaction domain-containing protein [Escherichia coli
E1167]
gi|388409222|gb|EIL69541.1| transcriptional regulatory protein ZraR [Escherichia coli 541-1]
gi|412965378|emb|CCK49311.1| response regulator of hydrogenase 3 activity (sensor HydH)
[Escherichia coli chi7122]
gi|412971974|emb|CCJ46644.1| response regulator of hydrogenase 3 activity (sensor HydH)
[Escherichia coli]
gi|431292726|gb|ELF83111.1| transcriptional regulatory protein zraR [Escherichia coli KTE29]
gi|443419994|gb|AGC84898.1| transcriptional regulatory protein ZraR [Escherichia coli APEC O78]
Length = 441
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDTLQATLEKAL 121
>gi|295913207|gb|ADG57862.1| transcription factor [Lycoris longituba]
Length = 196
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%)
Query: 186 STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLS 245
S +KK +V WT ELH F+ AV LG+DKAVP +IL+LM + LTR N+ASHLQK+R
Sbjct: 34 SHRKKKAKVDWTPELHRSFVQAVEQLGVDKAVPSRILELMGIVCLTRHNIASHLQKYRSH 93
Query: 246 LKRLGNKTLEAG 257
K L + +EA
Sbjct: 94 RKHLLAREVEAA 105
>gi|209921484|ref|YP_002295568.1| transcriptional regulatory protein ZraR [Escherichia coli SE11]
gi|422354680|ref|ZP_16435407.1| response regulator receiver domain protein [Escherichia coli MS
117-3]
gi|433094404|ref|ZP_20280647.1| transcriptional regulatory protein zraR [Escherichia coli KTE138]
gi|209914743|dbj|BAG79817.1| two-component regulator [Escherichia coli SE11]
gi|324017342|gb|EGB86561.1| response regulator receiver domain protein [Escherichia coli MS
117-3]
gi|431605934|gb|ELI75319.1| transcriptional regulatory protein zraR [Escherichia coli KTE138]
Length = 441
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDTLQATLEKAL 121
>gi|432891765|ref|ZP_20104329.1| transcriptional regulatory protein zraR [Escherichia coli KTE165]
gi|431428992|gb|ELH10924.1| transcriptional regulatory protein zraR [Escherichia coli KTE165]
Length = 441
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|420376193|ref|ZP_14875976.1| transcriptional regulatory protein zraR [Shigella flexneri 1235-66]
gi|391306357|gb|EIQ64114.1| transcriptional regulatory protein zraR [Shigella flexneri 1235-66]
Length = 441
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR YEV + AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYEVALAYSGRAALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
L E+ L +PV++++A+S + ++ + GA DYL+KP+ + L+ T + + ++
Sbjct: 66 ATLKEIKALNPAIPVLIMTAFSSVETAIEALKTGALDYLIKPLDFDRLQETLEKALAHRR 125
>gi|193067813|ref|ZP_03048779.1| response regulator ZraR [Escherichia coli E110019]
gi|419948577|ref|ZP_14464868.1| transcriptional regulatory protein ZraR [Escherichia coli CUMT8]
gi|432677184|ref|ZP_19912621.1| transcriptional regulatory protein zraR [Escherichia coli KTE142]
gi|432965770|ref|ZP_20154690.1| transcriptional regulatory protein zraR [Escherichia coli KTE203]
gi|192958788|gb|EDV89225.1| response regulator ZraR [Escherichia coli E110019]
gi|388421071|gb|EIL80698.1| transcriptional regulatory protein ZraR [Escherichia coli CUMT8]
gi|431209282|gb|ELF07391.1| transcriptional regulatory protein zraR [Escherichia coli KTE142]
gi|431475131|gb|ELH54935.1| transcriptional regulatory protein zraR [Escherichia coli KTE203]
Length = 441
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|417714445|ref|ZP_12363399.1| transcriptional regulatory protein zraR [Shigella flexneri K-272]
gi|417719313|ref|ZP_12368199.1| transcriptional regulatory protein zraR [Shigella flexneri K-227]
gi|332998847|gb|EGK18442.1| transcriptional regulatory protein zraR [Shigella flexneri K-272]
gi|333014307|gb|EGK33661.1| transcriptional regulatory protein zraR [Shigella flexneri K-227]
Length = 441
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|193066408|ref|ZP_03047455.1| response regulator ZraR [Escherichia coli E22]
gi|194429958|ref|ZP_03062467.1| response regulator ZraR [Escherichia coli B171]
gi|218556559|ref|YP_002389473.1| transcriptional regulatory protein ZraR [Escherichia coli IAI1]
gi|260846804|ref|YP_003224582.1| fused DNA-binding response regulator ZraR in two-component
regulatory system with ZraS: response regulator/sigma 54
interaction protein [Escherichia coli O103:H2 str.
12009]
gi|293474312|ref|ZP_06664721.1| two-component system [Escherichia coli B088]
gi|300819816|ref|ZP_07100003.1| response regulator receiver domain protein [Escherichia coli MS
107-1]
gi|415799291|ref|ZP_11498768.1| transcriptional regulatory protein zraR [Escherichia coli E128010]
gi|415881471|ref|ZP_11545432.1| transcriptional regulatory protein ZraR [Escherichia coli MS 79-10]
gi|417133877|ref|ZP_11978662.1| transcriptional regulator ZraR [Escherichia coli 5.0588]
gi|417157480|ref|ZP_11995104.1| transcriptional regulator ZraR [Escherichia coli 96.0497]
gi|417176467|ref|ZP_12006263.1| transcriptional regulator ZraR [Escherichia coli 3.2608]
gi|417187279|ref|ZP_12012136.1| transcriptional regulator ZraR [Escherichia coli 93.0624]
gi|417223317|ref|ZP_12026757.1| transcriptional regulator ZraR [Escherichia coli 96.154]
gi|417249833|ref|ZP_12041617.1| transcriptional regulator ZraR [Escherichia coli 4.0967]
gi|417583669|ref|ZP_12234464.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_B2F1]
gi|417604923|ref|ZP_12255482.1| transcriptional regulatory protein zraR [Escherichia coli STEC_94C]
gi|417626193|ref|ZP_12276478.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_H.1.8]
gi|417669606|ref|ZP_12319138.1| transcriptional regulatory protein zraR [Escherichia coli STEC_O31]
gi|419280797|ref|ZP_13823031.1| response regulator [Escherichia coli DEC10E]
gi|419292232|ref|ZP_13834311.1| response regulator [Escherichia coli DEC11A]
gi|419297554|ref|ZP_13839585.1| response regulator [Escherichia coli DEC11B]
gi|419303049|ref|ZP_13845036.1| transcriptional regulatory protein zraR [Escherichia coli DEC11C]
gi|419309091|ref|ZP_13850976.1| transcriptional regulatory protein zraR [Escherichia coli DEC11D]
gi|419314052|ref|ZP_13855905.1| transcriptional regulatory protein zraR [Escherichia coli DEC11E]
gi|419319515|ref|ZP_13861306.1| transcriptional regulatory protein zraR [Escherichia coli DEC12A]
gi|419325779|ref|ZP_13867459.1| response regulator [Escherichia coli DEC12B]
gi|419331728|ref|ZP_13873315.1| transcriptional regulatory protein zraR [Escherichia coli DEC12C]
gi|419337215|ref|ZP_13878720.1| response regulator [Escherichia coli DEC12D]
gi|419342606|ref|ZP_13884054.1| response regulator [Escherichia coli DEC12E]
gi|419347838|ref|ZP_13889200.1| response regulator [Escherichia coli DEC13A]
gi|419352300|ref|ZP_13893622.1| response regulator [Escherichia coli DEC13B]
gi|419357785|ref|ZP_13899025.1| response regulator [Escherichia coli DEC13C]
gi|419362747|ref|ZP_13903948.1| response regulator [Escherichia coli DEC13D]
gi|419367838|ref|ZP_13908979.1| response regulator [Escherichia coli DEC13E]
gi|419378199|ref|ZP_13919209.1| response regulator [Escherichia coli DEC14B]
gi|419383590|ref|ZP_13924524.1| response regulator [Escherichia coli DEC14C]
gi|419388841|ref|ZP_13929697.1| response regulator [Escherichia coli DEC14D]
gi|419872051|ref|ZP_14394096.1| transcriptional regulatory protein ZraR [Escherichia coli O103:H2
str. CVM9450]
gi|420394156|ref|ZP_14893394.1| response regulator [Escherichia coli EPEC C342-62]
gi|422778774|ref|ZP_16832418.1| sigma-54 interaction domain-containing protein [Escherichia coli
H120]
gi|432808249|ref|ZP_20042160.1| transcriptional regulatory protein zraR [Escherichia coli KTE91]
gi|432811751|ref|ZP_20045604.1| transcriptional regulatory protein zraR [Escherichia coli KTE101]
gi|432829618|ref|ZP_20063231.1| transcriptional regulatory protein zraR [Escherichia coli KTE135]
gi|432931800|ref|ZP_20131779.1| transcriptional regulatory protein zraR [Escherichia coli KTE184]
gi|433196067|ref|ZP_20380025.1| transcriptional regulatory protein zraR [Escherichia coli KTE90]
gi|192925932|gb|EDV80579.1| response regulator ZraR [Escherichia coli E22]
gi|194411987|gb|EDX28300.1| response regulator ZraR [Escherichia coli B171]
gi|218363328|emb|CAR00978.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein [Escherichia coli IAI1]
gi|257761951|dbj|BAI33448.1| fused DNA-binding response regulator ZraR in two-component
regulatory system with ZraS: response regulator/sigma 54
interaction protein [Escherichia coli O103:H2 str.
12009]
gi|291321342|gb|EFE60783.1| two-component system [Escherichia coli B088]
gi|300527637|gb|EFK48699.1| response regulator receiver domain protein [Escherichia coli MS
107-1]
gi|323161303|gb|EFZ47212.1| transcriptional regulatory protein zraR [Escherichia coli E128010]
gi|323943607|gb|EGB39715.1| sigma-54 interaction domain-containing protein [Escherichia coli
H120]
gi|342926138|gb|EGU94860.1| transcriptional regulatory protein ZraR [Escherichia coli MS 79-10]
gi|345332772|gb|EGW65227.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_B2F1]
gi|345346623|gb|EGW78946.1| transcriptional regulatory protein zraR [Escherichia coli STEC_94C]
gi|345370799|gb|EGX02774.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_H.1.8]
gi|378122887|gb|EHW84313.1| response regulator [Escherichia coli DEC10E]
gi|378124056|gb|EHW85470.1| response regulator [Escherichia coli DEC11A]
gi|378137790|gb|EHW99058.1| response regulator [Escherichia coli DEC11B]
gi|378143652|gb|EHX04842.1| transcriptional regulatory protein zraR [Escherichia coli DEC11D]
gi|378145422|gb|EHX06587.1| transcriptional regulatory protein zraR [Escherichia coli DEC11C]
gi|378153931|gb|EHX15009.1| transcriptional regulatory protein zraR [Escherichia coli DEC11E]
gi|378160716|gb|EHX21707.1| response regulator [Escherichia coli DEC12B]
gi|378163998|gb|EHX24948.1| transcriptional regulatory protein zraR [Escherichia coli DEC12A]
gi|378164495|gb|EHX25439.1| transcriptional regulatory protein zraR [Escherichia coli DEC12C]
gi|378178628|gb|EHX39391.1| response regulator [Escherichia coli DEC12D]
gi|378181768|gb|EHX42432.1| response regulator [Escherichia coli DEC13A]
gi|378181807|gb|EHX42469.1| response regulator [Escherichia coli DEC12E]
gi|378194855|gb|EHX55364.1| response regulator [Escherichia coli DEC13C]
gi|378195107|gb|EHX55612.1| response regulator [Escherichia coli DEC13B]
gi|378197327|gb|EHX57809.1| response regulator [Escherichia coli DEC13D]
gi|378207958|gb|EHX68344.1| response regulator [Escherichia coli DEC13E]
gi|378213482|gb|EHX73795.1| response regulator [Escherichia coli DEC14B]
gi|378223486|gb|EHX83708.1| response regulator [Escherichia coli DEC14C]
gi|378226223|gb|EHX86412.1| response regulator [Escherichia coli DEC14D]
gi|386151731|gb|EIH03020.1| transcriptional regulator ZraR [Escherichia coli 5.0588]
gi|386166230|gb|EIH32750.1| transcriptional regulator ZraR [Escherichia coli 96.0497]
gi|386179159|gb|EIH56638.1| transcriptional regulator ZraR [Escherichia coli 3.2608]
gi|386181770|gb|EIH64531.1| transcriptional regulator ZraR [Escherichia coli 93.0624]
gi|386203119|gb|EII02110.1| transcriptional regulator ZraR [Escherichia coli 96.154]
gi|386220154|gb|EII36618.1| transcriptional regulator ZraR [Escherichia coli 4.0967]
gi|388335665|gb|EIL02222.1| transcriptional regulatory protein ZraR [Escherichia coli O103:H2
str. CVM9450]
gi|391309004|gb|EIQ66689.1| response regulator [Escherichia coli EPEC C342-62]
gi|397782847|gb|EJK93713.1| transcriptional regulatory protein zraR [Escherichia coli STEC_O31]
gi|431352418|gb|ELG39196.1| transcriptional regulatory protein zraR [Escherichia coli KTE91]
gi|431358826|gb|ELG45472.1| transcriptional regulatory protein zraR [Escherichia coli KTE101]
gi|431381931|gb|ELG66282.1| transcriptional regulatory protein zraR [Escherichia coli KTE135]
gi|431458986|gb|ELH39305.1| transcriptional regulatory protein zraR [Escherichia coli KTE184]
gi|431712408|gb|ELJ76704.1| transcriptional regulatory protein zraR [Escherichia coli KTE90]
Length = 441
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|187730825|ref|YP_001882690.1| transcriptional regulator ZraR [Shigella boydii CDC 3083-94]
gi|191168666|ref|ZP_03030447.1| response regulator ZraR [Escherichia coli B7A]
gi|300824615|ref|ZP_07104723.1| response regulator receiver domain protein [Escherichia coli MS
119-7]
gi|300907558|ref|ZP_07125196.1| response regulator receiver domain protein [Escherichia coli MS
84-1]
gi|301302183|ref|ZP_07208315.1| response regulator receiver domain protein [Escherichia coli MS
124-1]
gi|307315022|ref|ZP_07594608.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli W]
gi|309797709|ref|ZP_07692095.1| response regulator receiver domain protein [Escherichia coli MS
145-7]
gi|331680128|ref|ZP_08380789.1| transcriptional regulatory protein ZraR [Escherichia coli H591]
gi|378715045|ref|YP_005279938.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli KO11FL]
gi|386611413|ref|YP_006126899.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma54 interaction
protein [Escherichia coli W]
gi|386698973|ref|YP_006162810.1| transcriptional regulatory protein ZraR [Escherichia coli KO11FL]
gi|386711953|ref|YP_006175674.1| transcriptional regulatory protein ZraR [Escherichia coli W]
gi|415810149|ref|ZP_11502654.1| transcriptional regulatory protein zraR [Escherichia coli LT-68]
gi|415867887|ref|ZP_11539650.1| response regulator receiver domain protein [Escherichia coli MS
85-1]
gi|417127973|ref|ZP_11975314.1| transcriptional regulator ZraR [Escherichia coli 97.0246]
gi|417227837|ref|ZP_12029595.1| transcriptional regulator ZraR [Escherichia coli 5.0959]
gi|417642026|ref|ZP_12292148.1| transcriptional regulatory protein zraR [Escherichia coli TX1999]
gi|417705204|ref|ZP_12354281.1| transcriptional regulatory protein zraR [Shigella flexneri VA-6]
gi|417829753|ref|ZP_12476297.1| response regulator [Shigella flexneri J1713]
gi|418943675|ref|ZP_13496839.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H43
str. T22]
gi|419172975|ref|ZP_13716842.1| transcriptional regulatory protein zraR [Escherichia coli DEC7A]
gi|419177701|ref|ZP_13721503.1| response regulator [Escherichia coli DEC7B]
gi|419183539|ref|ZP_13727135.1| response regulator [Escherichia coli DEC7C]
gi|419189153|ref|ZP_13732651.1| response regulator [Escherichia coli DEC7D]
gi|419194282|ref|ZP_13737717.1| transcriptional regulatory protein zraR [Escherichia coli DEC7E]
gi|419866639|ref|ZP_14388992.1| transcriptional regulatory protein ZraR [Escherichia coli O103:H25
str. CVM9340]
gi|419923289|ref|ZP_14441248.1| transcriptional regulatory protein ZraR [Escherichia coli 541-15]
gi|420333242|ref|ZP_14834885.1| transcriptional regulatory protein zraR [Shigella flexneri K-1770]
gi|420388373|ref|ZP_14887700.1| transcriptional regulatory protein zraR [Escherichia coli EPECa12]
gi|433137258|ref|ZP_20322576.1| transcriptional regulatory protein zraR [Escherichia coli KTE166]
gi|187427817|gb|ACD07091.1| response regulator ZraR [Shigella boydii CDC 3083-94]
gi|190901306|gb|EDV61074.1| response regulator ZraR [Escherichia coli B7A]
gi|300400725|gb|EFJ84263.1| response regulator receiver domain protein [Escherichia coli MS
84-1]
gi|300522864|gb|EFK43933.1| response regulator receiver domain protein [Escherichia coli MS
119-7]
gi|300842346|gb|EFK70106.1| response regulator receiver domain protein [Escherichia coli MS
124-1]
gi|306905527|gb|EFN36060.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli W]
gi|308118721|gb|EFO55983.1| response regulator receiver domain protein [Escherichia coli MS
145-7]
gi|315063330|gb|ADT77657.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma54 interaction
protein [Escherichia coli W]
gi|315252727|gb|EFU32695.1| response regulator receiver domain protein [Escherichia coli MS
85-1]
gi|323174483|gb|EFZ60108.1| transcriptional regulatory protein zraR [Escherichia coli LT-68]
gi|323380606|gb|ADX52874.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli KO11FL]
gi|331072283|gb|EGI43617.1| transcriptional regulatory protein ZraR [Escherichia coli H591]
gi|333010738|gb|EGK30166.1| transcriptional regulatory protein zraR [Shigella flexneri VA-6]
gi|335573699|gb|EGM60041.1| response regulator [Shigella flexneri J1713]
gi|345389543|gb|EGX19348.1| transcriptional regulatory protein zraR [Escherichia coli TX1999]
gi|375321018|gb|EHS66899.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H43
str. T22]
gi|378009652|gb|EHV72607.1| transcriptional regulatory protein zraR [Escherichia coli DEC7A]
gi|378020735|gb|EHV83474.1| response regulator [Escherichia coli DEC7C]
gi|378023072|gb|EHV85751.1| response regulator [Escherichia coli DEC7D]
gi|378027622|gb|EHV90249.1| response regulator [Escherichia coli DEC7B]
gi|378033853|gb|EHV96424.1| transcriptional regulatory protein zraR [Escherichia coli DEC7E]
gi|383390500|gb|AFH15458.1| transcriptional regulatory protein ZraR [Escherichia coli KO11FL]
gi|383407645|gb|AFH13888.1| transcriptional regulatory protein ZraR [Escherichia coli W]
gi|386143933|gb|EIG90401.1| transcriptional regulator ZraR [Escherichia coli 97.0246]
gi|386207172|gb|EII11677.1| transcriptional regulator ZraR [Escherichia coli 5.0959]
gi|388334346|gb|EIL00942.1| transcriptional regulatory protein ZraR [Escherichia coli O103:H25
str. CVM9340]
gi|388394130|gb|EIL55445.1| transcriptional regulatory protein ZraR [Escherichia coli 541-15]
gi|391247154|gb|EIQ06408.1| transcriptional regulatory protein zraR [Shigella flexneri K-1770]
gi|391300816|gb|EIQ58720.1| transcriptional regulatory protein zraR [Escherichia coli EPECa12]
gi|431652765|gb|ELJ19895.1| transcriptional regulatory protein zraR [Escherichia coli KTE166]
Length = 441
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|432478954|ref|ZP_19720922.1| transcriptional regulatory protein zraR [Escherichia coli KTE210]
gi|431012149|gb|ELD26214.1| transcriptional regulatory protein zraR [Escherichia coli KTE210]
Length = 441
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDTLQATLEKAL 121
>gi|74314498|ref|YP_312917.1| transcriptional regulatory protein ZraR [Shigella sonnei Ss046]
gi|383181306|ref|YP_005459311.1| transcriptional regulatory protein ZraR [Shigella sonnei 53G]
gi|414578887|ref|ZP_11436047.1| transcriptional regulatory protein zraR [Shigella sonnei 3233-85]
gi|415846650|ref|ZP_11525672.1| transcriptional regulatory protein zraR [Shigella sonnei 53G]
gi|418270315|ref|ZP_12888307.1| response regulator [Shigella sonnei str. Moseley]
gi|420356811|ref|ZP_14857834.1| transcriptional regulatory protein zraR [Shigella sonnei 3226-85]
gi|420366032|ref|ZP_14866887.1| response regulator [Shigella sonnei 4822-66]
gi|73857975|gb|AAZ90682.1| response regulator of hydrogenase 3 activity (sensor HydH)
[Shigella sonnei Ss046]
gi|323167475|gb|EFZ53183.1| transcriptional regulatory protein zraR [Shigella sonnei 53G]
gi|391280048|gb|EIQ38724.1| transcriptional regulatory protein zraR [Shigella sonnei 3233-85]
gi|391289970|gb|EIQ48452.1| transcriptional regulatory protein zraR [Shigella sonnei 3226-85]
gi|391291410|gb|EIQ49812.1| response regulator [Shigella sonnei 4822-66]
gi|397894638|gb|EJL11079.1| response regulator [Shigella sonnei str. Moseley]
Length = 441
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|422831761|ref|ZP_16879897.1| transcriptional regulatory protein zraR [Escherichia coli B093]
gi|371616166|gb|EHO04534.1| transcriptional regulatory protein zraR [Escherichia coli B093]
Length = 441
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|386620951|ref|YP_006140531.1| Transcriptional regulatory protein ZraR [Escherichia coli NA114]
gi|387831911|ref|YP_003351848.1| two-component regulator [Escherichia coli SE15]
gi|432424419|ref|ZP_19666952.1| transcriptional regulatory protein zraR [Escherichia coli KTE178]
gi|432502579|ref|ZP_19744325.1| transcriptional regulatory protein zraR [Escherichia coli KTE216]
gi|432561325|ref|ZP_19797974.1| transcriptional regulatory protein zraR [Escherichia coli KTE49]
gi|432696887|ref|ZP_19932075.1| transcriptional regulatory protein zraR [Escherichia coli KTE162]
gi|432708408|ref|ZP_19943481.1| transcriptional regulatory protein zraR [Escherichia coli KTE6]
gi|432923310|ref|ZP_20125996.1| transcriptional regulatory protein zraR [Escherichia coli KTE173]
gi|432923443|ref|ZP_20126026.1| transcriptional regulatory protein zraR [Escherichia coli KTE175]
gi|432983549|ref|ZP_20172295.1| transcriptional regulatory protein zraR [Escherichia coli KTE211]
gi|433098857|ref|ZP_20285016.1| transcriptional regulatory protein zraR [Escherichia coli KTE139]
gi|433108287|ref|ZP_20294239.1| transcriptional regulatory protein zraR [Escherichia coli KTE148]
gi|281181068|dbj|BAI57398.1| two-component regulator [Escherichia coli SE15]
gi|333971452|gb|AEG38257.1| Transcriptional regulatory protein ZraR [Escherichia coli NA114]
gi|430940965|gb|ELC61125.1| transcriptional regulatory protein zraR [Escherichia coli KTE178]
gi|431025381|gb|ELD38489.1| transcriptional regulatory protein zraR [Escherichia coli KTE216]
gi|431088048|gb|ELD93958.1| transcriptional regulatory protein zraR [Escherichia coli KTE49]
gi|431229615|gb|ELF26254.1| transcriptional regulatory protein zraR [Escherichia coli KTE162]
gi|431254336|gb|ELF47611.1| transcriptional regulatory protein zraR [Escherichia coli KTE6]
gi|431433801|gb|ELH15456.1| transcriptional regulatory protein zraR [Escherichia coli KTE173]
gi|431451910|gb|ELH32366.1| transcriptional regulatory protein zraR [Escherichia coli KTE175]
gi|431486655|gb|ELH66304.1| transcriptional regulatory protein zraR [Escherichia coli KTE211]
gi|431611659|gb|ELI80934.1| transcriptional regulatory protein zraR [Escherichia coli KTE139]
gi|431622957|gb|ELI91641.1| transcriptional regulatory protein zraR [Escherichia coli KTE148]
Length = 441
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|170680150|ref|YP_001746389.1| transcriptional regulatory protein ZraR [Escherichia coli SMS-3-5]
gi|170517868|gb|ACB16046.1| response regulator ZraR [Escherichia coli SMS-3-5]
Length = 441
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|170021993|ref|YP_001726947.1| transcriptional regulatory protein ZraR [Escherichia coli ATCC
8739]
gi|194439783|ref|ZP_03071850.1| response regulator ZraR [Escherichia coli 101-1]
gi|251787262|ref|YP_003001566.1| ZraR transcriptional activator [Escherichia coli BL21(DE3)]
gi|253775366|ref|YP_003038197.1| transcriptional regulatory protein ZraR [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163946|ref|YP_003047054.1| transcriptional regulatory protein ZraR [Escherichia coli B str.
REL606]
gi|254290696|ref|YP_003056444.1| fused response regulator/sigma54 interaction protein [Escherichia
coli BL21(DE3)]
gi|300928824|ref|ZP_07144332.1| response regulator receiver domain protein [Escherichia coli MS
187-1]
gi|386616826|ref|YP_006136492.1| transcriptional regulatory protein ZraR [Escherichia coli UMNK88]
gi|386707252|ref|YP_006171099.1| Response regulator containing CheY-like receiver, AAA-type ATPase,
and DNA-binding domains [Escherichia coli P12b]
gi|387614684|ref|YP_006117800.1| two-component system response regulator [Escherichia coli ETEC
H10407]
gi|417610775|ref|ZP_12261261.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_DG131-3]
gi|422789418|ref|ZP_16842147.1| sigma-54 interaction domain-containing protein [Escherichia coli
H489]
gi|422794385|ref|ZP_16847072.1| sigma-54 interaction domain-containing protein [Escherichia coli
TA007]
gi|425291224|ref|ZP_18682027.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
3006]
gi|432367509|ref|ZP_19610619.1| transcriptional regulatory protein zraR [Escherichia coli KTE10]
gi|432487796|ref|ZP_19729700.1| transcriptional regulatory protein zraR [Escherichia coli KTE212]
gi|432528857|ref|ZP_19765925.1| transcriptional regulatory protein zraR [Escherichia coli KTE233]
gi|432673093|ref|ZP_19908607.1| transcriptional regulatory protein zraR [Escherichia coli KTE119]
gi|433175939|ref|ZP_20360435.1| transcriptional regulatory protein zraR [Escherichia coli KTE232]
gi|442599346|ref|ZP_21017065.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|169756921|gb|ACA79620.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli ATCC 8739]
gi|194421280|gb|EDX37300.1| response regulator ZraR [Escherichia coli 101-1]
gi|242379535|emb|CAQ34351.1| ZraR transcriptional activator [Escherichia coli BL21(DE3)]
gi|253326410|gb|ACT31012.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975847|gb|ACT41518.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma54 interaction
protein [Escherichia coli B str. REL606]
gi|253980003|gb|ACT45673.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma54 interaction
protein [Escherichia coli BL21(DE3)]
gi|300463205|gb|EFK26698.1| response regulator receiver domain protein [Escherichia coli MS
187-1]
gi|309704420|emb|CBJ03769.1| two-component system response regulator [Escherichia coli ETEC
H10407]
gi|323958931|gb|EGB54606.1| sigma-54 interaction domain-containing protein [Escherichia coli
H489]
gi|323969078|gb|EGB64386.1| sigma-54 interaction domain-containing protein [Escherichia coli
TA007]
gi|332345995|gb|AEE59329.1| transcriptional regulatory protein ZraR [Escherichia coli UMNK88]
gi|345352649|gb|EGW84894.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_DG131-3]
gi|383105420|gb|AFG42929.1| Response regulator containing CheY-like receiver, AAA-type ATPase,
and DNA-binding domains [Escherichia coli P12b]
gi|408208536|gb|EKI33181.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
3006]
gi|430890548|gb|ELC13181.1| transcriptional regulatory protein zraR [Escherichia coli KTE10]
gi|431012886|gb|ELD26640.1| transcriptional regulatory protein zraR [Escherichia coli KTE212]
gi|431059472|gb|ELD68829.1| transcriptional regulatory protein zraR [Escherichia coli KTE233]
gi|431206969|gb|ELF05287.1| transcriptional regulatory protein zraR [Escherichia coli KTE119]
gi|431686543|gb|ELJ52108.1| transcriptional regulatory protein zraR [Escherichia coli KTE232]
gi|441651847|emb|CCQ02562.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O5:K4(L):H4 str. ATCC 23502]
Length = 441
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|432395409|ref|ZP_19638205.1| transcriptional regulatory protein zraR [Escherichia coli KTE25]
gi|432409094|ref|ZP_19651793.1| transcriptional regulatory protein zraR [Escherichia coli KTE28]
gi|432721166|ref|ZP_19956100.1| transcriptional regulatory protein zraR [Escherichia coli KTE17]
gi|432730094|ref|ZP_19964964.1| transcriptional regulatory protein zraR [Escherichia coli KTE18]
gi|432743783|ref|ZP_19978495.1| transcriptional regulatory protein zraR [Escherichia coli KTE23]
gi|432988516|ref|ZP_20177192.1| transcriptional regulatory protein zraR [Escherichia coli KTE217]
gi|433113301|ref|ZP_20299141.1| transcriptional regulatory protein zraR [Escherichia coli KTE150]
gi|430919693|gb|ELC40614.1| transcriptional regulatory protein zraR [Escherichia coli KTE25]
gi|430925743|gb|ELC46348.1| transcriptional regulatory protein zraR [Escherichia coli KTE28]
gi|431269804|gb|ELF61106.1| transcriptional regulatory protein zraR [Escherichia coli KTE17]
gi|431270332|gb|ELF61501.1| transcriptional regulatory protein zraR [Escherichia coli KTE18]
gi|431280812|gb|ELF71727.1| transcriptional regulatory protein zraR [Escherichia coli KTE23]
gi|431501473|gb|ELH80454.1| transcriptional regulatory protein zraR [Escherichia coli KTE217]
gi|431623478|gb|ELI92148.1| transcriptional regulatory protein zraR [Escherichia coli KTE150]
Length = 441
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|110807854|ref|YP_691374.1| transcriptional regulatory protein ZraR [Shigella flexneri 5 str.
8401]
gi|424840226|ref|ZP_18264863.1| transcriptional regulatory protein ZraR [Shigella flexneri 5a str.
M90T]
gi|110617402|gb|ABF06069.1| Transcriptional Regulatory protein [Shigella flexneri 5 str. 8401]
gi|383469278|gb|EID64299.1| transcriptional regulatory protein ZraR [Shigella flexneri 5a str.
M90T]
Length = 441
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|194434761|ref|ZP_03067012.1| response regulator ZraR [Shigella dysenteriae 1012]
gi|416285190|ref|ZP_11647661.1| Response regulator of zinc sigma-54-dependent two-component system
[Shigella boydii ATCC 9905]
gi|417674802|ref|ZP_12324234.1| transcriptional regulatory protein zraR [Shigella dysenteriae
155-74]
gi|420349990|ref|ZP_14851352.1| transcriptional regulatory protein zraR [Shigella boydii 965-58]
gi|194416985|gb|EDX33103.1| response regulator ZraR [Shigella dysenteriae 1012]
gi|320179532|gb|EFW54483.1| Response regulator of zinc sigma-54-dependent two-component system
[Shigella boydii ATCC 9905]
gi|332085401|gb|EGI90571.1| transcriptional regulatory protein zraR [Shigella dysenteriae
155-74]
gi|391264035|gb|EIQ23032.1| transcriptional regulatory protein zraR [Shigella boydii 965-58]
Length = 441
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|157157738|ref|YP_001465500.1| transcriptional regulatory protein ZraR [Escherichia coli E24377A]
gi|300925874|ref|ZP_07141717.1| response regulator receiver domain protein [Escherichia coli MS
182-1]
gi|301325713|ref|ZP_07219172.1| response regulator receiver domain protein [Escherichia coli MS
78-1]
gi|450229170|ref|ZP_21897723.1| transcriptional regulatory protein ZraR [Escherichia coli O08]
gi|157079768|gb|ABV19476.1| response regulator ZraR [Escherichia coli E24377A]
gi|300418064|gb|EFK01375.1| response regulator receiver domain protein [Escherichia coli MS
182-1]
gi|300847502|gb|EFK75262.1| response regulator receiver domain protein [Escherichia coli MS
78-1]
gi|449313114|gb|EMD03340.1| transcriptional regulatory protein ZraR [Escherichia coli O08]
Length = 441
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|432871964|ref|ZP_20091923.1| transcriptional regulatory protein zraR [Escherichia coli KTE147]
gi|431407265|gb|ELG90482.1| transcriptional regulatory protein zraR [Escherichia coli KTE147]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|16131834|ref|NP_418432.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma54 interaction
protein [Escherichia coli str. K-12 substr. MG1655]
gi|170083465|ref|YP_001732785.1| transcriptional regulatory protein ZraR [Escherichia coli str. K-12
substr. DH10B]
gi|238903061|ref|YP_002928857.1| transcriptional regulatory protein ZraR [Escherichia coli BW2952]
gi|300947388|ref|ZP_07161581.1| response regulator receiver domain protein [Escherichia coli MS
116-1]
gi|300954764|ref|ZP_07167194.1| response regulator receiver domain protein [Escherichia coli MS
175-1]
gi|301023375|ref|ZP_07187165.1| response regulator receiver domain protein [Escherichia coli MS
196-1]
gi|301645739|ref|ZP_07245660.1| response regulator receiver domain protein [Escherichia coli MS
146-1]
gi|312974209|ref|ZP_07788379.1| transcriptional regulatory protein zraR [Escherichia coli 1827-70]
gi|331644741|ref|ZP_08345859.1| transcriptional regulatory protein ZraR [Escherichia coli H736]
gi|386283086|ref|ZP_10060721.1| transcriptional regulatory protein zraR [Escherichia sp. 4_1_40B]
gi|386597478|ref|YP_006093878.1| two component Fis family sigma54-specific transcriptional regulator
[Escherichia coli DH1]
gi|387623637|ref|YP_006131265.1| transcriptional regulatory protein ZraR [Escherichia coli DH1]
gi|388479264|ref|YP_491456.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS [Escherichia coli str. K-12 substr.
W3110]
gi|404377429|ref|ZP_10982561.1| transcriptional regulatory protein zraR [Escherichia sp. 1_1_43]
gi|415775720|ref|ZP_11487404.1| transcriptional regulatory protein zraR [Escherichia coli 3431]
gi|417261064|ref|ZP_12048557.1| transcriptional regulator ZraR [Escherichia coli 2.3916]
gi|417273767|ref|ZP_12061112.1| transcriptional regulator ZraR [Escherichia coli 2.4168]
gi|417279431|ref|ZP_12066740.1| transcriptional regulator ZraR [Escherichia coli 3.2303]
gi|417293749|ref|ZP_12081028.1| transcriptional regulator ZraR [Escherichia coli B41]
gi|417615666|ref|ZP_12266112.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_EH250]
gi|417620697|ref|ZP_12271093.1| transcriptional regulatory protein zraR [Escherichia coli G58-1]
gi|417636964|ref|ZP_12287166.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_S1191]
gi|417947113|ref|ZP_12590314.1| transcriptional regulatory protein ZraR [Escherichia coli XH140A]
gi|417978675|ref|ZP_12619435.1| transcriptional regulatory protein ZraR [Escherichia coli XH001]
gi|418305629|ref|ZP_12917423.1| transcriptional regulatory protein zraR [Escherichia coli UMNF18]
gi|418960115|ref|ZP_13512009.1| transcriptional regulatory protein zraR [Escherichia coli J53]
gi|419151001|ref|ZP_13695644.1| response regulator [Escherichia coli DEC6B]
gi|419156529|ref|ZP_13701080.1| transcriptional regulatory protein zraR [Escherichia coli DEC6C]
gi|419166973|ref|ZP_13711416.1| response regulator [Escherichia coli DEC6E]
gi|419813341|ref|ZP_14338191.1| transcriptional regulatory protein ZraR [Escherichia coli O32:H37
str. P4]
gi|419939932|ref|ZP_14456712.1| transcriptional regulatory protein ZraR [Escherichia coli 75]
gi|422769359|ref|ZP_16823078.1| sigma-54 interaction domain-containing protein [Escherichia coli
E1520]
gi|422773933|ref|ZP_16827613.1| sigma-54 interaction domain-containing protein [Escherichia coli
E482]
gi|423703554|ref|ZP_17677986.1| transcriptional regulatory protein zraR [Escherichia coli H730]
gi|425117634|ref|ZP_18519402.1| transcriptional regulatory protein zraR [Escherichia coli 8.0566]
gi|425122349|ref|ZP_18524014.1| transcriptional regulatory protein zraR [Escherichia coli 8.0569]
gi|425275344|ref|ZP_18666718.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW15901]
gi|425285899|ref|ZP_18676907.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW00353]
gi|425307832|ref|ZP_18697490.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
N1]
gi|432419523|ref|ZP_19662109.1| transcriptional regulatory protein zraR [Escherichia coli KTE44]
gi|432566379|ref|ZP_19802931.1| transcriptional regulatory protein zraR [Escherichia coli KTE51]
gi|432578275|ref|ZP_19814718.1| transcriptional regulatory protein zraR [Escherichia coli KTE56]
gi|432629619|ref|ZP_19865579.1| transcriptional regulatory protein zraR [Escherichia coli KTE77]
gi|432634899|ref|ZP_19870794.1| transcriptional regulatory protein zraR [Escherichia coli KTE81]
gi|432658846|ref|ZP_19894517.1| transcriptional regulatory protein zraR [Escherichia coli KTE111]
gi|432683478|ref|ZP_19918808.1| transcriptional regulatory protein zraR [Escherichia coli KTE156]
gi|432689325|ref|ZP_19924586.1| transcriptional regulatory protein zraR [Escherichia coli KTE161]
gi|432702171|ref|ZP_19937305.1| transcriptional regulatory protein zraR [Escherichia coli KTE171]
gi|432735049|ref|ZP_19969859.1| transcriptional regulatory protein zraR [Escherichia coli KTE42]
gi|432878477|ref|ZP_20095815.1| transcriptional regulatory protein zraR [Escherichia coli KTE154]
gi|432951414|ref|ZP_20144993.1| transcriptional regulatory protein zraR [Escherichia coli KTE197]
gi|433050476|ref|ZP_20237787.1| transcriptional regulatory protein zraR [Escherichia coli KTE120]
gi|442589915|ref|ZP_21008704.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|450253910|ref|ZP_21902473.1| transcriptional regulatory protein ZraR [Escherichia coli S17]
gi|417166|sp|P14375.2|ZRAR_ECOLI RecName: Full=Transcriptional regulatory protein ZraR
gi|396343|gb|AAC43102.1| ORF_o441 [Escherichia coli str. K-12 substr. MG1655]
gi|1790437|gb|AAC76978.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma54 interaction
protein [Escherichia coli str. K-12 substr. MG1655]
gi|85676065|dbj|BAE77315.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS [Escherichia coli str. K12 substr.
W3110]
gi|169891300|gb|ACB05007.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator; sigma54
interaction protein [Escherichia coli str. K-12 substr.
DH10B]
gi|226838496|gb|EEH70526.1| transcriptional regulatory protein zraR [Escherichia sp. 1_1_43]
gi|238861185|gb|ACR63183.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma54 interaction
protein [Escherichia coli BW2952]
gi|260451167|gb|ACX41589.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli DH1]
gi|299880895|gb|EFI89106.1| response regulator receiver domain protein [Escherichia coli MS
196-1]
gi|300318263|gb|EFJ68047.1| response regulator receiver domain protein [Escherichia coli MS
175-1]
gi|300452992|gb|EFK16612.1| response regulator receiver domain protein [Escherichia coli MS
116-1]
gi|301075988|gb|EFK90794.1| response regulator receiver domain protein [Escherichia coli MS
146-1]
gi|310331376|gb|EFP98641.1| transcriptional regulatory protein zraR [Escherichia coli 1827-70]
gi|315138561|dbj|BAJ45720.1| transcriptional regulatory protein ZraR [Escherichia coli DH1]
gi|315617369|gb|EFU97975.1| transcriptional regulatory protein zraR [Escherichia coli 3431]
gi|323933954|gb|EGB30428.1| sigma-54 interaction domain-containing protein [Escherichia coli
E1520]
gi|323938879|gb|EGB35099.1| sigma-54 interaction domain-containing protein [Escherichia coli
E482]
gi|331036041|gb|EGI08278.1| transcriptional regulatory protein ZraR [Escherichia coli H736]
gi|339417727|gb|AEJ59399.1| transcriptional regulatory protein zraR [Escherichia coli UMNF18]
gi|342361177|gb|EGU25323.1| transcriptional regulatory protein ZraR [Escherichia coli XH140A]
gi|344191700|gb|EGV45810.1| transcriptional regulatory protein ZraR [Escherichia coli XH001]
gi|345357379|gb|EGW89577.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_EH250]
gi|345368362|gb|EGX00360.1| transcriptional regulatory protein zraR [Escherichia coli G58-1]
gi|345384455|gb|EGX14319.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_S1191]
gi|359334118|dbj|BAL40565.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS [Escherichia coli str. K-12 substr.
MDS42]
gi|377987990|gb|EHV51172.1| response regulator [Escherichia coli DEC6B]
gi|377991145|gb|EHV54297.1| transcriptional regulatory protein zraR [Escherichia coli DEC6C]
gi|378005608|gb|EHV68609.1| response regulator [Escherichia coli DEC6E]
gi|384377085|gb|EIE34982.1| transcriptional regulatory protein zraR [Escherichia coli J53]
gi|385153821|gb|EIF15847.1| transcriptional regulatory protein ZraR [Escherichia coli O32:H37
str. P4]
gi|385707993|gb|EIG45013.1| transcriptional regulatory protein zraR [Escherichia coli H730]
gi|386119843|gb|EIG68485.1| transcriptional regulatory protein zraR [Escherichia sp. 4_1_40B]
gi|386225468|gb|EII47798.1| transcriptional regulator ZraR [Escherichia coli 2.3916]
gi|386233949|gb|EII65929.1| transcriptional regulator ZraR [Escherichia coli 2.4168]
gi|386237857|gb|EII74798.1| transcriptional regulator ZraR [Escherichia coli 3.2303]
gi|386251937|gb|EIJ01629.1| transcriptional regulator ZraR [Escherichia coli B41]
gi|388405888|gb|EIL66304.1| transcriptional regulatory protein ZraR [Escherichia coli 75]
gi|408189339|gb|EKI15078.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW15901]
gi|408197201|gb|EKI22467.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW00353]
gi|408224324|gb|EKI48041.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
N1]
gi|408562604|gb|EKK38763.1| transcriptional regulatory protein zraR [Escherichia coli 8.0566]
gi|408563814|gb|EKK39942.1| transcriptional regulatory protein zraR [Escherichia coli 8.0569]
gi|430935576|gb|ELC55886.1| transcriptional regulatory protein zraR [Escherichia coli KTE44]
gi|431088947|gb|ELD94775.1| transcriptional regulatory protein zraR [Escherichia coli KTE51]
gi|431111197|gb|ELE15111.1| transcriptional regulatory protein zraR [Escherichia coli KTE56]
gi|431159443|gb|ELE59996.1| transcriptional regulatory protein zraR [Escherichia coli KTE77]
gi|431175729|gb|ELE75728.1| transcriptional regulatory protein zraR [Escherichia coli KTE81]
gi|431205195|gb|ELF03699.1| transcriptional regulatory protein zraR [Escherichia coli KTE111]
gi|431226840|gb|ELF23995.1| transcriptional regulatory protein zraR [Escherichia coli KTE156]
gi|431233887|gb|ELF29469.1| transcriptional regulatory protein zraR [Escherichia coli KTE161]
gi|431248584|gb|ELF42777.1| transcriptional regulatory protein zraR [Escherichia coli KTE171]
gi|431289154|gb|ELF79896.1| transcriptional regulatory protein zraR [Escherichia coli KTE42]
gi|431416541|gb|ELG99019.1| transcriptional regulatory protein zraR [Escherichia coli KTE154]
gi|431476639|gb|ELH56428.1| transcriptional regulatory protein zraR [Escherichia coli KTE197]
gi|431560960|gb|ELI34464.1| transcriptional regulatory protein zraR [Escherichia coli KTE120]
gi|441609872|emb|CCP94617.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|449313686|gb|EMD03885.1| transcriptional regulatory protein ZraR [Escherichia coli S17]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|419372651|ref|ZP_13913751.1| transcriptional regulatory protein zraR [Escherichia coli DEC14A]
gi|378211784|gb|EHX72118.1| transcriptional regulatory protein zraR [Escherichia coli DEC14A]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDTLQATLEKAL 121
>gi|420338201|ref|ZP_14839759.1| response regulator [Shigella flexneri K-315]
gi|391258577|gb|EIQ17670.1| response regulator [Shigella flexneri K-315]
Length = 328
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|415831830|ref|ZP_11517381.1| transcriptional regulatory protein zraR [Escherichia coli OK1357]
gi|323182104|gb|EFZ67514.1| transcriptional regulatory protein zraR [Escherichia coli OK1357]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDTLQATLEKAL 121
>gi|416334277|ref|ZP_11671233.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli WV_060327]
gi|320197100|gb|EFW71718.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli WV_060327]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|432857433|ref|ZP_20084336.1| transcriptional regulatory protein zraR [Escherichia coli KTE146]
gi|431410733|gb|ELG93886.1| transcriptional regulatory protein zraR [Escherichia coli KTE146]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|418040103|ref|ZP_12678354.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli W26]
gi|383476948|gb|EID68876.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli W26]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|419145119|ref|ZP_13689842.1| transcriptional regulatory protein zraR [Escherichia coli DEC6A]
gi|377988681|gb|EHV51858.1| transcriptional regulatory protein zraR [Escherichia coli DEC6A]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|386626918|ref|YP_006146646.1| transcriptional regulatory protein ZraR [Escherichia coli O7:K1
str. CE10]
gi|349740654|gb|AEQ15360.1| transcriptional regulatory protein ZraR [Escherichia coli O7:K1
str. CE10]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|422784709|ref|ZP_16837487.1| sigma-54 interaction domain-containing protein [Escherichia coli
TW10509]
gi|323974204|gb|EGB69336.1| sigma-54 interaction domain-containing protein [Escherichia coli
TW10509]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH-VIRRK 143
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + ++
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALVHTH 125
Query: 144 KVDPKDQNRSPHEF 157
VD + S +F
Sbjct: 126 SVDAETPAVSASQF 139
>gi|420322455|ref|ZP_14824276.1| transcriptional regulatory protein zraR [Shigella flexneri 2850-71]
gi|391245396|gb|EIQ04665.1| transcriptional regulatory protein zraR [Shigella flexneri 2850-71]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|218702639|ref|YP_002410268.1| transcriptional regulatory protein ZraR [Escherichia coli IAI39]
gi|218372625|emb|CAR20500.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein [Escherichia coli IAI39]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|170755155|ref|YP_001781532.1| DNA-binding response regulator [Clostridium botulinum B1 str. Okra]
gi|429245695|ref|ZP_19209070.1| DNA-binding response regulator [Clostridium botulinum CFSAN001628]
gi|169120367|gb|ACA44203.1| DNA-binding response regulator [Clostridium botulinum B1 str. Okra]
gi|428757273|gb|EKX79770.1| DNA-binding response regulator [Clostridium botulinum CFSAN001628]
Length = 221
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+L V+DD I+ + L+E Y V V + A++M R R NFDL+I DV +P +DG
Sbjct: 4 RILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFR--RWNFDLIILDVMLPKIDG 61
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
F + E++ E +P++ML+A + + MKG DY+ KP + L + V+RR
Sbjct: 62 FVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRA- 120
Query: 145 VDPKDQNRSPHEFEK 159
+ ++N S FE+
Sbjct: 121 -NGLEENNSTLTFEE 134
>gi|188492788|ref|ZP_03000058.1| response regulator ZraR [Escherichia coli 53638]
gi|188487987|gb|EDU63090.1| response regulator ZraR [Escherichia coli 53638]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|432795266|ref|ZP_20029334.1| transcriptional regulatory protein zraR [Escherichia coli KTE78]
gi|432796775|ref|ZP_20030806.1| transcriptional regulatory protein zraR [Escherichia coli KTE79]
gi|431334674|gb|ELG21828.1| transcriptional regulatory protein zraR [Escherichia coli KTE78]
gi|431347404|gb|ELG34293.1| transcriptional regulatory protein zraR [Escherichia coli KTE79]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|432619317|ref|ZP_19855413.1| transcriptional regulatory protein zraR [Escherichia coli KTE75]
gi|431150249|gb|ELE51306.1| transcriptional regulatory protein zraR [Escherichia coli KTE75]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|224126559|ref|XP_002329584.1| pseudo response regulator [Populus trichocarpa]
gi|222870293|gb|EEF07424.1| pseudo response regulator [Populus trichocarpa]
Length = 420
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 165 KDQDGEDEDEDGDDDGH-ENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILD 223
+++D + D D H N +KK +V WT ELH KF+ V LG+D+A+P ++L+
Sbjct: 261 QNKDSLNHSNDVASDLHTSNGTRANRKKMKVDWTPELHKKFVQVVEKLGVDQAIPSRVLE 320
Query: 224 LMNVEGLTRENVASHLQKFRL 244
LM VE LTR NVASHLQK+R+
Sbjct: 321 LMKVESLTRHNVASHLQKYRM 341
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+ VL +D+D + ++ L Y V AL + +F + I +V
Sbjct: 14 FPKGLSVLLLDEDNSSAAEIKSKLEALDYIVYTFCNENEALLAISNEPGSFHVAIVEVST 73
Query: 80 PDMDG-FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
+ +G FK LE DLP +M S +MK I GA ++L KP+ ++L+N WQH
Sbjct: 74 SNSNGSFKFLETAK---DLPTIMTSNIHCLNTMMKCIALGAVEFLRKPLSEDKLRNIWQH 130
Query: 139 VIRR 142
V+ +
Sbjct: 131 VVHK 134
>gi|218697712|ref|YP_002405379.1| transcriptional regulatory protein ZraR [Escherichia coli 55989]
gi|332282918|ref|ZP_08395331.1| transcriptional regulatory protein ZraR [Shigella sp. D9]
gi|407467010|ref|YP_006786548.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 2009EL-2071]
gi|407484266|ref|YP_006781416.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 2011C-3493]
gi|410484812|ref|YP_006772358.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 2009EL-2050]
gi|417161108|ref|ZP_11997441.1| transcriptional regulator ZraR [Escherichia coli 99.0741]
gi|417599455|ref|ZP_12250075.1| transcriptional regulatory protein zraR [Escherichia coli 3030-1]
gi|417835440|ref|ZP_12481879.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 01-09591]
gi|417868436|ref|ZP_12513463.1| hydG [Escherichia coli O104:H4 str. C227-11]
gi|419394324|ref|ZP_13935116.1| response regulator [Escherichia coli DEC15A]
gi|419399459|ref|ZP_13940214.1| response regulator [Escherichia coli DEC15B]
gi|419404700|ref|ZP_13945412.1| response regulator [Escherichia coli DEC15C]
gi|419409862|ref|ZP_13950542.1| response regulator [Escherichia coli DEC15D]
gi|419415426|ref|ZP_13956053.1| response regulator [Escherichia coli DEC15E]
gi|422990268|ref|ZP_16981040.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. C227-11]
gi|422997165|ref|ZP_16987927.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. C236-11]
gi|423002261|ref|ZP_16993012.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 09-7901]
gi|423005917|ref|ZP_16996662.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 04-8351]
gi|423012475|ref|ZP_17003206.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-3677]
gi|423021709|ref|ZP_17012414.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4404]
gi|423026865|ref|ZP_17017559.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4522]
gi|423032693|ref|ZP_17023379.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4623]
gi|423035568|ref|ZP_17026244.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423040689|ref|ZP_17031357.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423047374|ref|ZP_17038032.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423055912|ref|ZP_17044718.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423057917|ref|ZP_17046715.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C5]
gi|425425035|ref|ZP_18806174.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
0.1288]
gi|429721750|ref|ZP_19256662.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-9450]
gi|429773828|ref|ZP_19305838.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02030]
gi|429779012|ref|ZP_19310974.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02033-1]
gi|429782847|ref|ZP_19314768.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02092]
gi|429788240|ref|ZP_19320123.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02093]
gi|429794679|ref|ZP_19326516.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02281]
gi|429800639|ref|ZP_19332424.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02318]
gi|429804251|ref|ZP_19336004.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02913]
gi|429809076|ref|ZP_19340787.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-03439]
gi|429814841|ref|ZP_19346507.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-04080]
gi|429819801|ref|ZP_19351427.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-03943]
gi|429906119|ref|ZP_19372092.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-9990]
gi|429910253|ref|ZP_19376212.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-9941]
gi|429916151|ref|ZP_19382095.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4984]
gi|429921200|ref|ZP_19387124.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-5604]
gi|429927007|ref|ZP_19392916.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4986]
gi|429930938|ref|ZP_19396836.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4987]
gi|429937480|ref|ZP_19403364.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4988]
gi|429943157|ref|ZP_19409028.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-5603]
gi|429945839|ref|ZP_19411697.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-6006]
gi|429953402|ref|ZP_19419244.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec12-0465]
gi|429956746|ref|ZP_19422576.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec12-0466]
gi|432762908|ref|ZP_19997367.1| transcriptional regulatory protein zraR [Escherichia coli KTE48]
gi|218354444|emb|CAV01260.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein [Escherichia coli 55989]
gi|332105270|gb|EGJ08616.1| transcriptional regulatory protein ZraR [Shigella sp. D9]
gi|340732020|gb|EGR61159.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 01-09591]
gi|341921725|gb|EGT71321.1| hydG [Escherichia coli O104:H4 str. C227-11]
gi|345347514|gb|EGW79820.1| transcriptional regulatory protein zraR [Escherichia coli 3030-1]
gi|354857018|gb|EHF17475.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. C236-11]
gi|354860811|gb|EHF21252.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 04-8351]
gi|354861335|gb|EHF21775.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. C227-11]
gi|354870041|gb|EHF30447.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 09-7901]
gi|354875807|gb|EHF36172.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-3677]
gi|354884530|gb|EHF44842.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4404]
gi|354888308|gb|EHF48568.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4522]
gi|354891861|gb|EHF52080.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4623]
gi|354903893|gb|EHF63992.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354907415|gb|EHF67478.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354909190|gb|EHF69224.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354911920|gb|EHF71923.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C4]
gi|354919801|gb|EHF79741.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C5]
gi|378232523|gb|EHX92622.1| response regulator [Escherichia coli DEC15A]
gi|378239411|gb|EHX99401.1| response regulator [Escherichia coli DEC15B]
gi|378242184|gb|EHY02147.1| response regulator [Escherichia coli DEC15C]
gi|378250492|gb|EHY10397.1| response regulator [Escherichia coli DEC15D]
gi|378254899|gb|EHY14760.1| response regulator [Escherichia coli DEC15E]
gi|386174247|gb|EIH46247.1| transcriptional regulator ZraR [Escherichia coli 99.0741]
gi|406779974|gb|AFS59398.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 2009EL-2050]
gi|407056563|gb|AFS76614.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 2011C-3493]
gi|407063045|gb|AFS84092.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 2009EL-2071]
gi|408340242|gb|EKJ54748.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
0.1288]
gi|429354376|gb|EKY91076.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02030]
gi|429355281|gb|EKY91973.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02033-1]
gi|429356168|gb|EKY92849.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02092]
gi|429369891|gb|EKZ06462.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02093]
gi|429370588|gb|EKZ07153.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02281]
gi|429373195|gb|EKZ09743.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02318]
gi|429385992|gb|EKZ22443.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02913]
gi|429387937|gb|EKZ24366.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-03439]
gi|429389847|gb|EKZ26265.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-03943]
gi|429399120|gb|EKZ35443.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-04080]
gi|429401326|gb|EKZ37632.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-9990]
gi|429404119|gb|EKZ40398.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-9450]
gi|429412505|gb|EKZ48700.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4984]
gi|429414954|gb|EKZ51127.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4986]
gi|429422504|gb|EKZ58621.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4987]
gi|429426577|gb|EKZ62665.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4988]
gi|429431547|gb|EKZ67595.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-5603]
gi|429437853|gb|EKZ73850.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-5604]
gi|429441940|gb|EKZ77904.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec12-0465]
gi|429447337|gb|EKZ83260.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-6006]
gi|429453977|gb|EKZ89844.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec12-0466]
gi|429458351|gb|EKZ94178.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-9941]
gi|431315006|gb|ELG02936.1| transcriptional regulatory protein zraR [Escherichia coli KTE48]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDTLQATLEKAL 121
>gi|432604827|ref|ZP_19841051.1| transcriptional regulatory protein zraR [Escherichia coli KTE66]
gi|431135985|gb|ELE37858.1| transcriptional regulatory protein zraR [Escherichia coli KTE66]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|407474743|ref|YP_006789143.1| two-component response regulator [Clostridium acidurici 9a]
gi|407051251|gb|AFS79296.1| two-component response regulator [Clostridium acidurici 9a]
Length = 188
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 75/120 (62%), Gaps = 2/120 (1%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++L V+DD +++FL + +Y +T T+ L+ ++N+ +DLVI D+ MP+MDG
Sbjct: 4 KILVVEDDIEIAFAIKEFLAKKRYAITWTSTGKEGLEEFQKNK--YDLVIVDIMMPEMDG 61
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
F L + + ++ D+P++++SA S K +KG+N GA DY+ KP + EL+ IRR K
Sbjct: 62 FTLCKNIRMKSDIPILIMSAKSQEKDKVKGLNIGADDYITKPFSLVELEARIDSHIRRYK 121
>gi|366157619|ref|ZP_09457481.1| transcriptional regulatory protein ZraR [Escherichia sp. TW09308]
gi|432374589|ref|ZP_19617618.1| transcriptional regulatory protein zraR [Escherichia coli KTE11]
gi|430893222|gb|ELC15558.1| transcriptional regulatory protein zraR [Escherichia coli KTE11]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 3/121 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTQ 125
Query: 145 V 145
+
Sbjct: 126 I 126
>gi|416900679|ref|ZP_11929867.1| transcriptional regulatory protein zraR [Escherichia coli STEC_7v]
gi|417116913|ref|ZP_11967774.1| transcriptional regulator ZraR [Escherichia coli 1.2741]
gi|422803652|ref|ZP_16852136.1| sigma-54 interaction domain-containing protein [Escherichia coli
M863]
gi|323963777|gb|EGB59276.1| sigma-54 interaction domain-containing protein [Escherichia coli
M863]
gi|327250477|gb|EGE62187.1| transcriptional regulatory protein zraR [Escherichia coli STEC_7v]
gi|386139457|gb|EIG80612.1| transcriptional regulator ZraR [Escherichia coli 1.2741]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVVLANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|331649858|ref|ZP_08350936.1| transcriptional regulatory protein ZraR [Escherichia coli M605]
gi|417664646|ref|ZP_12314225.1| response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli AA86]
gi|330908320|gb|EGH36839.1| response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli AA86]
gi|331041324|gb|EGI13476.1| transcriptional regulatory protein ZraR [Escherichia coli M605]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|87301814|ref|ZP_01084648.1| two-component response regulator [Synechococcus sp. WH 5701]
gi|87283382|gb|EAQ75337.1| two-component response regulator [Synechococcus sp. WH 5701]
Length = 248
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDD+ + +IL+ L Y+V + + AL+ R++ + DLV+ DV MP +DG+
Sbjct: 11 ILVVDDEASIRRILDTRLSMIGYQVVTASDGVEALEAFRQS--SPDLVVLDVMMPKLDGY 68
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKKV 145
+ + + E D+P+VML+A D + G+ GA DY++KP +EL+ + V+RR +
Sbjct: 69 GVCQELRKESDVPIVMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRCVLRRVEK 128
Query: 146 DP 147
DP
Sbjct: 129 DP 130
>gi|357474449|ref|XP_003607509.1| Two-component response regulator-like APRR2 [Medicago truncatula]
gi|355508564|gb|AES89706.1| Two-component response regulator-like APRR2 [Medicago truncatula]
Length = 442
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%)
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
++K +V WT ELH +F+ AV LG+DKAVP +IL++M ++ LTR N+ASHLQK+R K
Sbjct: 174 KRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKH 233
Query: 249 LGNKTLEAG 257
L + EA
Sbjct: 234 LLAREAEAA 242
>gi|331655705|ref|ZP_08356695.1| transcriptional regulatory protein ZraR [Escherichia coli M718]
gi|331046630|gb|EGI18717.1| transcriptional regulatory protein ZraR [Escherichia coli M718]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLEATLEKAL 121
>gi|293413440|ref|ZP_06656100.1| transcriptional regulatory protein ZraR [Escherichia coli B354]
gi|424818244|ref|ZP_18243395.1| transcriptional regulatory protein ZraR [Escherichia fergusonii
ECD227]
gi|291468035|gb|EFF10534.1| transcriptional regulatory protein ZraR [Escherichia coli B354]
gi|325499264|gb|EGC97123.1| transcriptional regulatory protein ZraR [Escherichia fergusonii
ECD227]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|218551012|ref|YP_002384803.1| transcriptional regulatory protein ZraR [Escherichia fergusonii
ATCC 35469]
gi|422808316|ref|ZP_16856740.1| sigma-54 interaction domain-containing protein [Escherichia
fergusonii B253]
gi|218358553|emb|CAQ91201.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein [Escherichia fergusonii ATCC 35469]
gi|324110916|gb|EGC04908.1| sigma-54 interaction domain-containing protein [Escherichia
fergusonii B253]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|420355628|ref|ZP_14856687.1| transcriptional regulatory protein zraR [Shigella boydii 4444-74]
gi|391271750|gb|EIQ30617.1| transcriptional regulatory protein zraR [Shigella boydii 4444-74]
Length = 392
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|419161879|ref|ZP_13706366.1| transcriptional regulatory protein zraR [Escherichia coli DEC6D]
gi|378003342|gb|EHV66386.1| transcriptional regulatory protein zraR [Escherichia coli DEC6D]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--IFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|420097350|ref|ZP_14608652.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9634]
gi|394384625|gb|EJE62182.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9634]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDTLQATLEKAL 121
>gi|260870715|ref|YP_003237117.1| fused DNA-binding response regulator ZraR in two-component
regulatory system with ZraS: response regulator/sigma 54
interaction protein [Escherichia coli O111:H- str.
11128]
gi|415822094|ref|ZP_11510845.1| transcriptional regulatory protein zraR [Escherichia coli OK1180]
gi|417202070|ref|ZP_12018320.1| transcriptional regulator ZraR [Escherichia coli 4.0522]
gi|417212591|ref|ZP_12022208.1| transcriptional regulator ZraR [Escherichia coli JB1-95]
gi|417594480|ref|ZP_12245166.1| transcriptional regulatory protein zraR [Escherichia coli 2534-86]
gi|419199811|ref|ZP_13743094.1| transcriptional regulatory protein zraR [Escherichia coli DEC8A]
gi|419205364|ref|ZP_13748528.1| response regulator [Escherichia coli DEC8B]
gi|419219007|ref|ZP_13761977.1| response regulator [Escherichia coli DEC8E]
gi|419229655|ref|ZP_13772484.1| response regulator [Escherichia coli DEC9A]
gi|419235210|ref|ZP_13777970.1| response regulator [Escherichia coli DEC9B]
gi|419240568|ref|ZP_13783267.1| response regulator [Escherichia coli DEC9C]
gi|419246164|ref|ZP_13788790.1| response regulator [Escherichia coli DEC9D]
gi|419251988|ref|ZP_13794550.1| response regulator [Escherichia coli DEC9E]
gi|419286975|ref|ZP_13829130.1| response regulator [Escherichia coli DEC10F]
gi|419891238|ref|ZP_14411357.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9570]
gi|419897079|ref|ZP_14416674.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9574]
gi|420090897|ref|ZP_14602658.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9602]
gi|424768680|ref|ZP_18195943.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CFSAN001632]
gi|257767071|dbj|BAI38566.1| fused DNA-binding response regulator ZraR in two-component
regulatory system with ZraS: response regulator/sigma 54
interaction protein [Escherichia coli O111:H- str.
11128]
gi|323177560|gb|EFZ63145.1| transcriptional regulatory protein zraR [Escherichia coli OK1180]
gi|345331587|gb|EGW64047.1| transcriptional regulatory protein zraR [Escherichia coli 2534-86]
gi|378042040|gb|EHW04494.1| transcriptional regulatory protein zraR [Escherichia coli DEC8A]
gi|378045023|gb|EHW07430.1| response regulator [Escherichia coli DEC8B]
gi|378067544|gb|EHW29663.1| response regulator [Escherichia coli DEC9A]
gi|378072520|gb|EHW34578.1| response regulator [Escherichia coli DEC9B]
gi|378075270|gb|EHW37297.1| response regulator [Escherichia coli DEC8E]
gi|378078311|gb|EHW40300.1| response regulator [Escherichia coli DEC9C]
gi|378085927|gb|EHW47809.1| response regulator [Escherichia coli DEC9D]
gi|378088523|gb|EHW50375.1| response regulator [Escherichia coli DEC9E]
gi|378124089|gb|EHW85502.1| response regulator [Escherichia coli DEC10F]
gi|386186957|gb|EIH75780.1| transcriptional regulator ZraR [Escherichia coli 4.0522]
gi|386194831|gb|EIH89074.1| transcriptional regulator ZraR [Escherichia coli JB1-95]
gi|388350728|gb|EIL16062.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9570]
gi|388355897|gb|EIL20712.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9574]
gi|394384974|gb|EJE62523.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9602]
gi|421945849|gb|EKU03034.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CFSAN001632]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDTLQATLEKAL 121
>gi|291285419|ref|YP_003502237.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. CB9615]
gi|387509454|ref|YP_006161710.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. RM12579]
gi|416779198|ref|ZP_11876288.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. G5101]
gi|416790420|ref|ZP_11881177.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H-
str. 493-89]
gi|416802240|ref|ZP_11886066.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H-
str. H 2687]
gi|416813079|ref|ZP_11891005.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. 3256-97]
gi|416823562|ref|ZP_11895607.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. USDA 5905]
gi|416833824|ref|ZP_11900601.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. LSU-61]
gi|419078215|ref|ZP_13623707.1| response regulator [Escherichia coli DEC3F]
gi|419117583|ref|ZP_13662586.1| response regulator [Escherichia coli DEC5A]
gi|419123817|ref|ZP_13668735.1| response regulator [Escherichia coli DEC5B]
gi|419128812|ref|ZP_13673676.1| response regulator [Escherichia coli DEC5C]
gi|419134144|ref|ZP_13678964.1| response regulator [Escherichia coli DEC5D]
gi|419139428|ref|ZP_13684213.1| transcriptional regulatory protein zraR [Escherichia coli DEC5E]
gi|420283284|ref|ZP_14785511.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW06591]
gi|425146867|ref|ZP_18546840.1| transcriptional regulatory protein zraR [Escherichia coli 10.0869]
gi|425251931|ref|ZP_18644855.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
5905]
gi|425264029|ref|ZP_18656001.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC96038]
gi|425270021|ref|ZP_18661627.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
5412]
gi|445014853|ref|ZP_21330944.1| transcriptional regulatory protein zraR [Escherichia coli PA48]
gi|209751638|gb|ACI74126.1| response regulator HydG [Escherichia coli]
gi|209751644|gb|ACI74129.1| response regulator HydG [Escherichia coli]
gi|290765292|gb|ADD59253.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. CB9615]
gi|320639095|gb|EFX08735.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. G5101]
gi|320644489|gb|EFX13552.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H-
str. 493-89]
gi|320649808|gb|EFX18329.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H-
str. H 2687]
gi|320655141|gb|EFX23097.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320660785|gb|EFX28239.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. USDA 5905]
gi|320665903|gb|EFX32934.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. LSU-61]
gi|374361448|gb|AEZ43155.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. RM12579]
gi|377916446|gb|EHU80529.1| response regulator [Escherichia coli DEC3F]
gi|377956639|gb|EHV20186.1| response regulator [Escherichia coli DEC5A]
gi|377958261|gb|EHV21777.1| response regulator [Escherichia coli DEC5B]
gi|377968519|gb|EHV31911.1| response regulator [Escherichia coli DEC5C]
gi|377970169|gb|EHV33540.1| response regulator [Escherichia coli DEC5D]
gi|377979732|gb|EHV43008.1| transcriptional regulatory protein zraR [Escherichia coli DEC5E]
gi|390778950|gb|EIO46700.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW06591]
gi|408161065|gb|EKH89048.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
5905]
gi|408176761|gb|EKI03596.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC96038]
gi|408179972|gb|EKI06618.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
5412]
gi|408588111|gb|EKK62712.1| transcriptional regulatory protein zraR [Escherichia coli 10.0869]
gi|444619781|gb|ELV93807.1| transcriptional regulatory protein zraR [Escherichia coli PA48]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|254486252|ref|ZP_05099457.1| response regulator receiver domain protein [Roseobacter sp. GAI101]
gi|214043121|gb|EEB83759.1| response regulator receiver domain protein [Roseobacter sp. GAI101]
Length = 314
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQ-YEVTVTNRAITALKMLRENRNNFDLVISDVYMPDM 82
MR+LAVDDD L +LE ++ EV V AL+ + +++ FD + D+ MP+M
Sbjct: 1 MRILAVDDDSVVLDLLEVIFKQSDGIEVVVAASGALALEAIATSKDGFDCFLLDISMPEM 60
Query: 83 DGFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
G +L E + G D P++ML+A +D + + GA DY+ KP + ++ Q
Sbjct: 61 TGIELCERIRVHGAHRDTPIIMLTANTDKTSIEQAFAAGASDYITKPFDVADISTRVQIA 120
Query: 140 IRR-------KKVDPKDQNRS 153
R + +DP + +RS
Sbjct: 121 ARMVQSGDTVRAIDPSEPSRS 141
>gi|417141603|ref|ZP_11984455.1| transcriptional regulator ZraR [Escherichia coli 97.0259]
gi|417310611|ref|ZP_12097422.1| Transcriptional regulatory protein zraR [Escherichia coli PCN033]
gi|338767828|gb|EGP22637.1| Transcriptional regulatory protein zraR [Escherichia coli PCN033]
gi|386155506|gb|EIH11857.1| transcriptional regulator ZraR [Escherichia coli 97.0259]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|326520958|dbj|BAJ92842.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 402
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 166 DQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDK-AVPKKILDL 224
D+D +D E D E ++S +KPR W ELH +F+ A+ LG A PK+I +L
Sbjct: 204 DKDSKDATEKDTDKDKEGQSSQPNRKPRRCWAPELHRRFLQALQQLGGSHVATPKQIREL 263
Query: 225 MNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGAL 275
M V+GLT + V SHLQK+RL R + T ++ A+ + +G+
Sbjct: 264 MKVDGLTNDEVKSHLQKYRLHTSRRPSSTAQSSGAATTTQPAPQFFVVGSC 314
>gi|153871532|ref|ZP_02000680.1| adenylate/guanylate cyclase [Beggiatoa sp. PS]
gi|152071998|gb|EDN69316.1| adenylate/guanylate cyclase [Beggiatoa sp. PS]
Length = 594
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 67/114 (58%), Gaps = 11/114 (9%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNR---AITALKMLRENRNNFDLVISDVYMPD 81
+VL VDD+ LKIL +FL++ +EV + AIT +K L+ D+++ D+ MP
Sbjct: 7 KVLIVDDNSVNLKILSRFLKKAHFEVIMAKNGESAITQVKNLKP-----DIILLDIMMPG 61
Query: 82 MDGF---KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEEL 132
MDGF + L+ D+PV+ ++A T +KG GA DY+ KPV+MEE+
Sbjct: 62 MDGFETCRCLKANEESKDIPVIFMTALESTPDKVKGFKIGAIDYITKPVQMEEV 115
>gi|301019445|ref|ZP_07183618.1| response regulator receiver domain protein [Escherichia coli MS
69-1]
gi|419918878|ref|ZP_14437053.1| transcriptional regulatory protein ZraR [Escherichia coli KD2]
gi|300399260|gb|EFJ82798.1| response regulator receiver domain protein [Escherichia coli MS
69-1]
gi|388389091|gb|EIL50629.1| transcriptional regulatory protein ZraR [Escherichia coli KD2]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVVLANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|82546346|ref|YP_410293.1| response regulator of hydrogenase 3 activity [Shigella boydii
Sb227]
gi|417683255|ref|ZP_12332603.1| transcriptional regulatory protein zraR [Shigella boydii 3594-74]
gi|421684625|ref|ZP_16124409.1| response regulator [Shigella flexneri 1485-80]
gi|81247757|gb|ABB68465.1| response regulator of hydrogenase 3 activity [Shigella boydii
Sb227]
gi|332092316|gb|EGI97391.1| transcriptional regulatory protein zraR [Shigella boydii 3594-74]
gi|404335966|gb|EJZ62431.1| response regulator [Shigella flexneri 1485-80]
Length = 408
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQAT 116
>gi|451946630|ref|YP_007467225.1| PAS domain S-box [Desulfocapsa sulfexigens DSM 10523]
gi|451905978|gb|AGF77572.1| PAS domain S-box [Desulfocapsa sulfexigens DSM 10523]
Length = 868
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+L VDD+ L+I++K L YEVT N + A++ML E N FDL+I+D MP M G
Sbjct: 750 RILIVDDEMIVLEIMQKRLEYLGYEVTACNNGLDAVRMLEEKPNAFDLIITDQTMPHMLG 809
Query: 85 FKLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
+++ +++ + ++PV++ S YS + N G YL KPV E L + + V+
Sbjct: 810 TEMVSKMLTIRPEIPVILCSGYSTSVSEETSKNLGIKLYLQKPVEFEVLSKSIRSVL 866
>gi|331685747|ref|ZP_08386329.1| transcriptional regulatory protein ZraR [Escherichia coli H299]
gi|450196287|ref|ZP_21892815.1| transcriptional regulatory protein ZraR [Escherichia coli SEPT362]
gi|331077057|gb|EGI48273.1| transcriptional regulatory protein ZraR [Escherichia coli H299]
gi|449315670|gb|EMD05808.1| transcriptional regulatory protein ZraR [Escherichia coli SEPT362]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|218707623|ref|YP_002415142.1| transcriptional regulatory protein ZraR [Escherichia coli UMN026]
gi|293407621|ref|ZP_06651539.1| transcriptional regulatory protein ZraR [Escherichia coli FVEC1412]
gi|298383369|ref|ZP_06992961.1| two-component system [Escherichia coli FVEC1302]
gi|300897581|ref|ZP_07115990.1| response regulator receiver domain protein [Escherichia coli MS
198-1]
gi|331665661|ref|ZP_08366557.1| transcriptional regulatory protein ZraR [Escherichia coli TA143]
gi|417589196|ref|ZP_12239955.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_C165-02]
gi|419931968|ref|ZP_14449338.1| transcriptional regulatory protein ZraR [Escherichia coli 576-1]
gi|422335720|ref|ZP_16416714.1| transcriptional regulatory protein zraR [Escherichia coli
4_1_47FAA]
gi|432356037|ref|ZP_19599295.1| transcriptional regulatory protein zraR [Escherichia coli KTE2]
gi|432404399|ref|ZP_19647139.1| transcriptional regulatory protein zraR [Escherichia coli KTE26]
gi|432428667|ref|ZP_19671143.1| transcriptional regulatory protein zraR [Escherichia coli KTE181]
gi|432463409|ref|ZP_19705537.1| transcriptional regulatory protein zraR [Escherichia coli KTE204]
gi|432478365|ref|ZP_19720347.1| transcriptional regulatory protein zraR [Escherichia coli KTE208]
gi|432491834|ref|ZP_19733689.1| transcriptional regulatory protein zraR [Escherichia coli KTE213]
gi|432520215|ref|ZP_19757391.1| transcriptional regulatory protein zraR [Escherichia coli KTE228]
gi|432540383|ref|ZP_19777271.1| transcriptional regulatory protein zraR [Escherichia coli KTE235]
gi|432633948|ref|ZP_19869862.1| transcriptional regulatory protein zraR [Escherichia coli KTE80]
gi|432643599|ref|ZP_19879417.1| transcriptional regulatory protein zraR [Escherichia coli KTE83]
gi|432663722|ref|ZP_19899329.1| transcriptional regulatory protein zraR [Escherichia coli KTE116]
gi|432772775|ref|ZP_20007084.1| transcriptional regulatory protein zraR [Escherichia coli KTE54]
gi|432817837|ref|ZP_20051565.1| transcriptional regulatory protein zraR [Escherichia coli KTE115]
gi|432837098|ref|ZP_20070599.1| transcriptional regulatory protein zraR [Escherichia coli KTE140]
gi|432882806|ref|ZP_20098470.1| transcriptional regulatory protein zraR [Escherichia coli KTE158]
gi|432915897|ref|ZP_20121064.1| transcriptional regulatory protein zraR [Escherichia coli KTE190]
gi|433021262|ref|ZP_20209331.1| transcriptional regulatory protein zraR [Escherichia coli KTE105]
gi|433055632|ref|ZP_20242778.1| transcriptional regulatory protein zraR [Escherichia coli KTE122]
gi|433070411|ref|ZP_20257166.1| transcriptional regulatory protein zraR [Escherichia coli KTE128]
gi|433161163|ref|ZP_20345970.1| transcriptional regulatory protein zraR [Escherichia coli KTE177]
gi|433180878|ref|ZP_20365243.1| transcriptional regulatory protein zraR [Escherichia coli KTE82]
gi|433205761|ref|ZP_20389496.1| transcriptional regulatory protein zraR [Escherichia coli KTE95]
gi|218434720|emb|CAR15652.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein [Escherichia coli UMN026]
gi|291425389|gb|EFE98429.1| transcriptional regulatory protein ZraR [Escherichia coli FVEC1412]
gi|298276248|gb|EFI17769.1| two-component system [Escherichia coli FVEC1302]
gi|300358657|gb|EFJ74527.1| response regulator receiver domain protein [Escherichia coli MS
198-1]
gi|331057179|gb|EGI29171.1| transcriptional regulatory protein ZraR [Escherichia coli TA143]
gi|345330576|gb|EGW63045.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_C165-02]
gi|373243283|gb|EHP62796.1| transcriptional regulatory protein zraR [Escherichia coli
4_1_47FAA]
gi|388419875|gb|EIL79581.1| transcriptional regulatory protein ZraR [Escherichia coli 576-1]
gi|430871699|gb|ELB95333.1| transcriptional regulatory protein zraR [Escherichia coli KTE2]
gi|430922159|gb|ELC42920.1| transcriptional regulatory protein zraR [Escherichia coli KTE26]
gi|430949838|gb|ELC69260.1| transcriptional regulatory protein zraR [Escherichia coli KTE181]
gi|430984865|gb|ELD01483.1| transcriptional regulatory protein zraR [Escherichia coli KTE204]
gi|431001272|gb|ELD16856.1| transcriptional regulatory protein zraR [Escherichia coli KTE208]
gi|431016443|gb|ELD29988.1| transcriptional regulatory protein zraR [Escherichia coli KTE213]
gi|431047123|gb|ELD57132.1| transcriptional regulatory protein zraR [Escherichia coli KTE228]
gi|431066166|gb|ELD74910.1| transcriptional regulatory protein zraR [Escherichia coli KTE235]
gi|431166576|gb|ELE66888.1| transcriptional regulatory protein zraR [Escherichia coli KTE80]
gi|431176599|gb|ELE76546.1| transcriptional regulatory protein zraR [Escherichia coli KTE83]
gi|431206057|gb|ELF04489.1| transcriptional regulatory protein zraR [Escherichia coli KTE116]
gi|431323197|gb|ELG10750.1| transcriptional regulatory protein zraR [Escherichia coli KTE54]
gi|431359445|gb|ELG46084.1| transcriptional regulatory protein zraR [Escherichia coli KTE115]
gi|431394165|gb|ELG77703.1| transcriptional regulatory protein zraR [Escherichia coli KTE140]
gi|431422938|gb|ELH05069.1| transcriptional regulatory protein zraR [Escherichia coli KTE158]
gi|431434249|gb|ELH15900.1| transcriptional regulatory protein zraR [Escherichia coli KTE190]
gi|431526021|gb|ELI02791.1| transcriptional regulatory protein zraR [Escherichia coli KTE105]
gi|431564592|gb|ELI37763.1| transcriptional regulatory protein zraR [Escherichia coli KTE122]
gi|431577807|gb|ELI50431.1| transcriptional regulatory protein zraR [Escherichia coli KTE128]
gi|431672509|gb|ELJ38751.1| transcriptional regulatory protein zraR [Escherichia coli KTE177]
gi|431697091|gb|ELJ62237.1| transcriptional regulatory protein zraR [Escherichia coli KTE82]
gi|431714876|gb|ELJ79051.1| transcriptional regulatory protein zraR [Escherichia coli KTE95]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|432682791|ref|ZP_19918140.1| transcriptional regulatory protein zraR [Escherichia coli KTE143]
gi|431216507|gb|ELF14106.1| transcriptional regulatory protein zraR [Escherichia coli KTE143]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|399021363|ref|ZP_10723474.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Herbaspirillum sp. CF444]
gi|398092231|gb|EJL82647.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Herbaspirillum sp. CF444]
Length = 237
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 68/122 (55%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++L VDDDQ +L+ +L + QYEV + + L + + LVI DV +PD DG
Sbjct: 4 KILIVDDDQKTRTLLKTYLEKNQYEVRLAHNGEAFLAEFQRYADELSLVILDVMLPDTDG 63
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
F L ++V + ++P++ML+A SD + G+ GA DY+ KP EL + + RR
Sbjct: 64 FALCKIVRRKSNVPIIMLTASSDETDRVVGLELGADDYIAKPYSPRELLARIKAIHRRTG 123
Query: 145 VD 146
+D
Sbjct: 124 ID 125
>gi|407780118|ref|ZP_11127365.1| two component transcriptional regulator [Nitratireductor pacificus
pht-3B]
gi|407298116|gb|EKF17261.1| two component transcriptional regulator [Nitratireductor pacificus
pht-3B]
Length = 248
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD +L +FLRE + VT+ A A + L N +FDL I DV MP DG
Sbjct: 29 LLVVDDDTRIRGLLNRFLRENGFRVTIAGNAAEARRKL--NGLDFDLAILDVMMPGEDGV 86
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
L + + D+P++ML+A S+T+ + G+ GA DYL KP EL +++RR
Sbjct: 87 SLTRALRADKDMPILMLTALSETESRVVGLEAGADDYLPKPFDPRELVLRINNILRR 143
>gi|302342658|ref|YP_003807187.1| response regulator receiver protein [Desulfarculus baarsii DSM
2075]
gi|301639271|gb|ADK84593.1| response regulator receiver protein [Desulfarculus baarsii DSM
2075]
Length = 288
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 4/120 (3%)
Query: 18 DKFPI-GMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISD 76
+K P+ R+L DD+ ++L++FL ++V + ALK+ RE FDLV+SD
Sbjct: 9 EKLPVRPSRILVADDEDALRELLKRFLETKGHQVVLAQDGREALKLFREQ--PFDLVLSD 66
Query: 77 VYMPDMDGFKLLELVG-LEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
V MP +DG +LL V + PVV++S Y D + V+ + GA ++L KP+R++ L+
Sbjct: 67 VRMPGLDGLQLLAAVKDINPRTPVVLISGYGDIETVVTALKAGAENFLAKPIRIDMLRRV 126
>gi|420382574|ref|ZP_14882008.1| transcriptional regulatory protein zraR [Shigella dysenteriae
225-75]
gi|391298388|gb|EIQ56397.1| transcriptional regulatory protein zraR [Shigella dysenteriae
225-75]
Length = 348
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|417807695|ref|ZP_12454621.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. LB226692]
gi|340737591|gb|EGR71846.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. LB226692]
Length = 408
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDTLQATLEKAL 121
>gi|422367514|ref|ZP_16447950.1| response regulator receiver domain protein [Escherichia coli MS
16-3]
gi|432895993|ref|ZP_20107311.1| transcriptional regulatory protein zraR [Escherichia coli KTE192]
gi|433030968|ref|ZP_20218806.1| transcriptional regulatory protein zraR [Escherichia coli KTE109]
gi|315300747|gb|EFU59972.1| response regulator receiver domain protein [Escherichia coli MS
16-3]
gi|431433098|gb|ELH14771.1| transcriptional regulatory protein zraR [Escherichia coli KTE192]
gi|431539113|gb|ELI15088.1| transcriptional regulatory protein zraR [Escherichia coli KTE109]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L++T + +
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQSTLEKAL 121
>gi|15614827|ref|NP_243130.1| two-component response regulator [Bacillus halodurans C-125]
gi|10174883|dbj|BAB05983.1| two-component response regulator [Bacillus halodurans C-125]
Length = 231
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
RVL VDD++ ++ + E Y V + A+ L+ FDLV+ D+ +PD+DG
Sbjct: 4 RVLVVDDEKKMQVLITVCVSEAGYLVQTAASGLAAMDRLKAE--PFDLVLLDIMLPDVDG 61
Query: 85 FKLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK 143
F L+ +L L+ D+ ++ML+A +T+ +++G+N GA DY++KP +EL V+RRK
Sbjct: 62 FSLIAQLRHLQEDVAIIMLTALGETEHIVRGLNEGADDYIVKPFEPDELNARILSVLRRK 121
>gi|42565471|gb|AAS21003.1| cytokinin response regulator 1 protein [Hyacinthus orientalis]
Length = 254
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
Query: 172 EDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLT 231
E E+ +DD +++ + K+PR+VWT +LHT+ + V LG+ AVPK I+ L GLT
Sbjct: 125 EAENSEDD----QSARSLKRPRLVWTPQLHTRLLTWVAHLGIKTAVPKTIMQLRMSRGLT 180
Query: 232 RENVASHLQKFRL 244
RENVASHLQK+RL
Sbjct: 181 RENVASHLQKYRL 193
>gi|15804595|ref|NP_290636.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. EDL933]
gi|15834181|ref|NP_312954.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. Sakai]
gi|168752030|ref|ZP_02777052.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4113]
gi|168758599|ref|ZP_02783606.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4401]
gi|168764585|ref|ZP_02789592.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4501]
gi|168771477|ref|ZP_02796484.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4486]
gi|168777382|ref|ZP_02802389.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4196]
gi|168780390|ref|ZP_02805397.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4076]
gi|168790365|ref|ZP_02815372.1| response regulator ZraR [Escherichia coli O157:H7 str. EC869]
gi|168798361|ref|ZP_02823368.1| response regulator ZraR [Escherichia coli O157:H7 str. EC508]
gi|195939630|ref|ZP_03085012.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. EC4024]
gi|208805812|ref|ZP_03248149.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4206]
gi|208812972|ref|ZP_03254301.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4045]
gi|208821649|ref|ZP_03261969.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4042]
gi|209396243|ref|YP_002273521.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. EC4115]
gi|217326117|ref|ZP_03442201.1| response regulator ZraR [Escherichia coli O157:H7 str. TW14588]
gi|254796002|ref|YP_003080839.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. TW14359]
gi|261227284|ref|ZP_05941565.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator, sigma54
[Escherichia coli O157:H7 str. FRIK2000]
gi|261257031|ref|ZP_05949564.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator, sigma54
[Escherichia coli O157:H7 str. FRIK966]
gi|387885226|ref|YP_006315528.1| transcriptional regulatory protein ZraR [Escherichia coli Xuzhou21]
gi|416308228|ref|ZP_11654969.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O157:H7 str. 1044]
gi|416324621|ref|ZP_11665327.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O157:H7 str. 1125]
gi|419047294|ref|ZP_13594227.1| response regulator [Escherichia coli DEC3A]
gi|419048809|ref|ZP_13595729.1| response regulator [Escherichia coli DEC3B]
gi|419059930|ref|ZP_13606725.1| response regulator [Escherichia coli DEC3C]
gi|419065912|ref|ZP_13612605.1| response regulator [Escherichia coli DEC3D]
gi|419072328|ref|ZP_13617922.1| response regulator [Escherichia coli DEC3E]
gi|419083368|ref|ZP_13628807.1| response regulator [Escherichia coli DEC4A]
gi|419089314|ref|ZP_13634660.1| response regulator [Escherichia coli DEC4B]
gi|419095880|ref|ZP_13641148.1| response regulator [Escherichia coli DEC4C]
gi|419095978|ref|ZP_13641231.1| response regulator [Escherichia coli DEC4D]
gi|419106654|ref|ZP_13651771.1| response regulator [Escherichia coli DEC4E]
gi|419107223|ref|ZP_13652334.1| response regulator [Escherichia coli DEC4F]
gi|420272508|ref|ZP_14774852.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA22]
gi|420278153|ref|ZP_14780427.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA40]
gi|420284047|ref|ZP_14786269.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW10246]
gi|420294391|ref|ZP_14796504.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW11039]
gi|420307072|ref|ZP_14809053.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW10119]
gi|420318092|ref|ZP_14819956.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1734]
gi|421815079|ref|ZP_16250773.1| transcriptional regulatory protein zraR [Escherichia coli 8.0416]
gi|421820856|ref|ZP_16256334.1| transcriptional regulatory protein zraR [Escherichia coli 10.0821]
gi|421826798|ref|ZP_16262147.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK920]
gi|421832833|ref|ZP_16268114.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA7]
gi|423728283|ref|ZP_17702030.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA31]
gi|424080353|ref|ZP_17817287.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA505]
gi|424093162|ref|ZP_17829065.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1996]
gi|424106046|ref|ZP_17840754.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1990]
gi|424112682|ref|ZP_17846888.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
93-001]
gi|424118615|ref|ZP_17852429.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA3]
gi|424124816|ref|ZP_17858092.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA5]
gi|424130979|ref|ZP_17863861.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA9]
gi|424143851|ref|ZP_17875681.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA14]
gi|424150217|ref|ZP_17881572.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA15]
gi|424165320|ref|ZP_17886993.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA24]
gi|424258710|ref|ZP_17892533.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA25]
gi|424336286|ref|ZP_17898471.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA28]
gi|424452555|ref|ZP_17904176.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA32]
gi|424458718|ref|ZP_17909793.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA33]
gi|424465251|ref|ZP_17915543.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA39]
gi|424471482|ref|ZP_17921259.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA41]
gi|424477971|ref|ZP_17927266.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA42]
gi|424483752|ref|ZP_17932712.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW07945]
gi|424489947|ref|ZP_17938462.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW09098]
gi|424496662|ref|ZP_17944155.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW09195]
gi|424503268|ref|ZP_17950131.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4203]
gi|424509541|ref|ZP_17955886.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4196]
gi|424516945|ref|ZP_17961506.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW14313]
gi|424523072|ref|ZP_17967156.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW14301]
gi|424528945|ref|ZP_17972636.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4421]
gi|424535088|ref|ZP_17978416.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4422]
gi|424541175|ref|ZP_17984099.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4013]
gi|424547321|ref|ZP_17989629.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4402]
gi|424553518|ref|ZP_17995324.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4439]
gi|424559721|ref|ZP_18001094.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4436]
gi|424566044|ref|ZP_18007026.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4437]
gi|424572171|ref|ZP_18012684.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4448]
gi|424578327|ref|ZP_18018339.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1845]
gi|424584152|ref|ZP_18023778.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1863]
gi|425100825|ref|ZP_18503541.1| transcriptional regulatory protein zraR [Escherichia coli 3.4870]
gi|425112902|ref|ZP_18514803.1| transcriptional regulatory protein zraR [Escherichia coli 6.0172]
gi|425128828|ref|ZP_18529978.1| transcriptional regulatory protein zraR [Escherichia coli 8.0586]
gi|425134597|ref|ZP_18535429.1| transcriptional regulatory protein zraR [Escherichia coli 8.2524]
gi|425141190|ref|ZP_18541551.1| transcriptional regulatory protein zraR [Escherichia coli 10.0833]
gi|425152980|ref|ZP_18552574.1| transcriptional regulatory protein zraR [Escherichia coli 88.0221]
gi|425158881|ref|ZP_18558124.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA34]
gi|425165198|ref|ZP_18564065.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA506]
gi|425170948|ref|ZP_18569402.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA507]
gi|425176992|ref|ZP_18575091.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA504]
gi|425183051|ref|ZP_18580728.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1999]
gi|425189354|ref|ZP_18586605.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1997]
gi|425196080|ref|ZP_18592831.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
NE1487]
gi|425208937|ref|ZP_18604715.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK2001]
gi|425214735|ref|ZP_18610118.1| transcriptional regulatory protein zraR [Escherichia coli PA4]
gi|425220817|ref|ZP_18615760.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA23]
gi|425227467|ref|ZP_18621913.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA49]
gi|425233619|ref|ZP_18627639.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA45]
gi|425239544|ref|ZP_18633244.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TT12B]
gi|425245782|ref|ZP_18639069.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
MA6]
gi|425257773|ref|ZP_18650248.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
CB7326]
gi|425314190|ref|ZP_18703337.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1735]
gi|425320172|ref|ZP_18708929.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1736]
gi|425326312|ref|ZP_18714618.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1737]
gi|425332621|ref|ZP_18720413.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1846]
gi|425338798|ref|ZP_18726117.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1847]
gi|425345091|ref|ZP_18731960.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1848]
gi|425350930|ref|ZP_18737369.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1849]
gi|425357201|ref|ZP_18743243.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1850]
gi|425363153|ref|ZP_18748780.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1856]
gi|425369418|ref|ZP_18754474.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1862]
gi|425375723|ref|ZP_18760342.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1864]
gi|425388610|ref|ZP_18772149.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1866]
gi|425395339|ref|ZP_18778425.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1868]
gi|425401394|ref|ZP_18784080.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1869]
gi|425407490|ref|ZP_18789691.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1870]
gi|425413847|ref|ZP_18795589.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
NE098]
gi|425420065|ref|ZP_18801317.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK523]
gi|425431461|ref|ZP_18812050.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
0.1304]
gi|428949868|ref|ZP_19022119.1| transcriptional regulatory protein zraR [Escherichia coli 88.1467]
gi|428955939|ref|ZP_19027709.1| transcriptional regulatory protein zraR [Escherichia coli 88.1042]
gi|428961896|ref|ZP_19033154.1| transcriptional regulatory protein zraR [Escherichia coli 89.0511]
gi|428968559|ref|ZP_19039243.1| transcriptional regulatory protein zraR [Escherichia coli 90.0091]
gi|428974294|ref|ZP_19044585.1| transcriptional regulatory protein zraR [Escherichia coli 90.0039]
gi|428980761|ref|ZP_19050545.1| transcriptional regulatory protein zraR [Escherichia coli 90.2281]
gi|428986506|ref|ZP_19055875.1| transcriptional regulatory protein zraR [Escherichia coli 93.0055]
gi|428992655|ref|ZP_19061622.1| transcriptional regulatory protein zraR [Escherichia coli 93.0056]
gi|428998548|ref|ZP_19067119.1| transcriptional regulatory protein zraR [Escherichia coli 94.0618]
gi|429004944|ref|ZP_19072982.1| transcriptional regulatory protein zraR [Escherichia coli 95.0183]
gi|429011022|ref|ZP_19078396.1| transcriptional regulatory protein zraR [Escherichia coli 95.1288]
gi|429017441|ref|ZP_19084297.1| transcriptional regulatory protein zraR [Escherichia coli 95.0943]
gi|429023274|ref|ZP_19089768.1| transcriptional regulatory protein zraR [Escherichia coli 96.0428]
gi|429029364|ref|ZP_19095315.1| transcriptional regulatory protein zraR [Escherichia coli 96.0427]
gi|429035506|ref|ZP_19101008.1| transcriptional regulatory protein zraR [Escherichia coli 96.0939]
gi|429041613|ref|ZP_19106681.1| transcriptional regulatory protein zraR [Escherichia coli 96.0932]
gi|429047422|ref|ZP_19112114.1| transcriptional regulatory protein zraR [Escherichia coli 96.0107]
gi|429052836|ref|ZP_19117388.1| transcriptional regulatory protein zraR [Escherichia coli 97.0003]
gi|429058371|ref|ZP_19122596.1| transcriptional regulatory protein zraR [Escherichia coli 97.1742]
gi|429063877|ref|ZP_19127820.1| transcriptional regulatory protein zraR [Escherichia coli 97.0007]
gi|429070123|ref|ZP_19133537.1| transcriptional regulatory protein zraR [Escherichia coli 99.0672]
gi|429075841|ref|ZP_19139080.1| transcriptional regulatory protein zraR [Escherichia coli 99.0678]
gi|429081090|ref|ZP_19144211.1| transcriptional regulatory protein zraR [Escherichia coli 99.0713]
gi|429829276|ref|ZP_19360250.1| transcriptional regulatory protein zraR [Escherichia coli 96.0109]
gi|429835742|ref|ZP_19365962.1| transcriptional regulatory protein zraR [Escherichia coli 97.0010]
gi|444933387|ref|ZP_21252379.1| transcriptional regulatory protein zraR [Escherichia coli 99.0814]
gi|444938828|ref|ZP_21257546.1| transcriptional regulatory protein zraR [Escherichia coli 99.0815]
gi|444944459|ref|ZP_21262929.1| transcriptional regulatory protein zraR [Escherichia coli 99.0816]
gi|444949203|ref|ZP_21267501.1| transcriptional regulatory protein zraR [Escherichia coli 99.0839]
gi|444955541|ref|ZP_21273592.1| transcriptional regulatory protein zraR [Escherichia coli 99.0848]
gi|444960963|ref|ZP_21278769.1| transcriptional regulatory protein zraR [Escherichia coli 99.1753]
gi|444966169|ref|ZP_21283713.1| transcriptional regulatory protein zraR [Escherichia coli 99.1775]
gi|444977490|ref|ZP_21294550.1| transcriptional regulatory protein zraR [Escherichia coli 99.1805]
gi|444988243|ref|ZP_21305005.1| transcriptional regulatory protein zraR [Escherichia coli PA11]
gi|444993620|ref|ZP_21310247.1| transcriptional regulatory protein zraR [Escherichia coli PA19]
gi|444998804|ref|ZP_21315290.1| transcriptional regulatory protein zraR [Escherichia coli PA13]
gi|445004312|ref|ZP_21320688.1| transcriptional regulatory protein zraR [Escherichia coli PA2]
gi|445009742|ref|ZP_21325955.1| transcriptional regulatory protein zraR [Escherichia coli PA47]
gi|445020738|ref|ZP_21336687.1| transcriptional regulatory protein zraR [Escherichia coli PA8]
gi|445026168|ref|ZP_21341977.1| transcriptional regulatory protein zraR [Escherichia coli 7.1982]
gi|445031582|ref|ZP_21347233.1| transcriptional regulatory protein zraR [Escherichia coli 99.1781]
gi|445037022|ref|ZP_21352534.1| transcriptional regulatory protein zraR [Escherichia coli 99.1762]
gi|445042719|ref|ZP_21358076.1| transcriptional regulatory protein zraR [Escherichia coli PA35]
gi|445053463|ref|ZP_21368462.1| transcriptional regulatory protein zraR [Escherichia coli 95.0083]
gi|445061444|ref|ZP_21373947.1| transcriptional regulatory protein zraR [Escherichia coli 99.0670]
gi|452970668|ref|ZP_21968895.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
O157:H7 str. EC4009]
gi|20140981|sp|Q8X613.1|ZRAR_ECO57 RecName: Full=Transcriptional regulatory protein ZraR
gi|12518936|gb|AAG59201.1|AE005632_2 response regulator of hydrogenase 3 activity (sensor HydH)
[Escherichia coli O157:H7 str. EDL933]
gi|13364403|dbj|BAB38350.1| response regulator HydG [Escherichia coli O157:H7 str. Sakai]
gi|187767371|gb|EDU31215.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4196]
gi|188014032|gb|EDU52154.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4113]
gi|189001862|gb|EDU70848.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4076]
gi|189354602|gb|EDU73021.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4401]
gi|189359769|gb|EDU78188.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4486]
gi|189365464|gb|EDU83880.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4501]
gi|189370154|gb|EDU88570.1| response regulator ZraR [Escherichia coli O157:H7 str. EC869]
gi|189379122|gb|EDU97538.1| response regulator ZraR [Escherichia coli O157:H7 str. EC508]
gi|208725613|gb|EDZ75214.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4206]
gi|208734249|gb|EDZ82936.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4045]
gi|208741772|gb|EDZ89454.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4042]
gi|209157643|gb|ACI35076.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4115]
gi|209751640|gb|ACI74127.1| response regulator HydG [Escherichia coli]
gi|209751642|gb|ACI74128.1| response regulator HydG [Escherichia coli]
gi|209751646|gb|ACI74130.1| response regulator HydG [Escherichia coli]
gi|217322338|gb|EEC30762.1| response regulator ZraR [Escherichia coli O157:H7 str. TW14588]
gi|254595402|gb|ACT74763.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator, sigma54
interaction protein [Escherichia coli O157:H7 str.
TW14359]
gi|326347144|gb|EGD70874.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O157:H7 str. 1125]
gi|326347605|gb|EGD71327.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O157:H7 str. 1044]
gi|377890718|gb|EHU55174.1| response regulator [Escherichia coli DEC3A]
gi|377901374|gb|EHU65694.1| response regulator [Escherichia coli DEC3C]
gi|377902853|gb|EHU67155.1| response regulator [Escherichia coli DEC3B]
gi|377902883|gb|EHU67184.1| response regulator [Escherichia coli DEC3D]
gi|377906133|gb|EHU70388.1| response regulator [Escherichia coli DEC3E]
gi|377922726|gb|EHU86707.1| response regulator [Escherichia coli DEC4A]
gi|377925870|gb|EHU89807.1| response regulator [Escherichia coli DEC4B]
gi|377935376|gb|EHU99175.1| response regulator [Escherichia coli DEC4C]
gi|377943360|gb|EHV07080.1| response regulator [Escherichia coli DEC4E]
gi|377952166|gb|EHV15764.1| response regulator [Escherichia coli DEC4D]
gi|377967790|gb|EHV31193.1| response regulator [Escherichia coli DEC4F]
gi|386798684|gb|AFJ31718.1| transcriptional regulatory protein ZraR [Escherichia coli Xuzhou21]
gi|390636804|gb|EIN16375.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1996]
gi|390636971|gb|EIN16531.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA505]
gi|390656392|gb|EIN34272.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
93-001]
gi|390658862|gb|EIN36645.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1990]
gi|390673694|gb|EIN49921.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA3]
gi|390677021|gb|EIN53097.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA5]
gi|390680473|gb|EIN56317.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA9]
gi|390695718|gb|EIN70230.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA14]
gi|390696943|gb|EIN71379.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA15]
gi|390711000|gb|EIN83993.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA22]
gi|390716518|gb|EIN89316.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA24]
gi|390717712|gb|EIN90489.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA25]
gi|390723807|gb|EIN96387.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA28]
gi|390736363|gb|EIO07700.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA31]
gi|390737118|gb|EIO08428.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA32]
gi|390740876|gb|EIO11991.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA33]
gi|390755298|gb|EIO24844.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA40]
gi|390757480|gb|EIO26959.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA39]
gi|390761536|gb|EIO30824.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA41]
gi|390764426|gb|EIO33636.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA42]
gi|390785207|gb|EIO52761.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW07945]
gi|390794374|gb|EIO61671.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW11039]
gi|390796667|gb|EIO63935.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW10246]
gi|390799619|gb|EIO66758.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW09098]
gi|390813304|gb|EIO79941.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW10119]
gi|390821063|gb|EIO87278.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW09195]
gi|390822154|gb|EIO88292.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4203]
gi|390827190|gb|EIO92968.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4196]
gi|390840367|gb|EIP04408.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW14313]
gi|390842375|gb|EIP06226.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW14301]
gi|390847399|gb|EIP10942.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4421]
gi|390857879|gb|EIP20303.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4422]
gi|390862280|gb|EIP24480.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4013]
gi|390866210|gb|EIP28185.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4402]
gi|390874611|gb|EIP35714.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4439]
gi|390879968|gb|EIP40687.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4436]
gi|390889862|gb|EIP49565.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4437]
gi|390891016|gb|EIP50659.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4448]
gi|390905479|gb|EIP64422.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1734]
gi|390914710|gb|EIP73245.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1845]
gi|390915476|gb|EIP73990.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1863]
gi|408062685|gb|EKG97187.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA7]
gi|408063234|gb|EKG97730.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK920]
gi|408063628|gb|EKG98118.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA34]
gi|408074839|gb|EKH09092.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA506]
gi|408079994|gb|EKH14095.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA507]
gi|408088037|gb|EKH21432.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA504]
gi|408094314|gb|EKH27350.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1999]
gi|408100535|gb|EKH33034.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1997]
gi|408105457|gb|EKH37625.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
NE1487]
gi|408118363|gb|EKH49506.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK2001]
gi|408124634|gb|EKH55292.1| transcriptional regulatory protein zraR [Escherichia coli PA4]
gi|408134583|gb|EKH64407.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA23]
gi|408136222|gb|EKH65971.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA49]
gi|408143505|gb|EKH72802.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA45]
gi|408151781|gb|EKH80260.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TT12B]
gi|408156947|gb|EKH85132.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
MA6]
gi|408170031|gb|EKH97262.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
CB7326]
gi|408223286|gb|EKI47069.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1735]
gi|408234472|gb|EKI57486.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1736]
gi|408236966|gb|EKI59834.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1737]
gi|408242647|gb|EKI65214.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1846]
gi|408251491|gb|EKI73221.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1847]
gi|408255901|gb|EKI77321.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1848]
gi|408262583|gb|EKI83518.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1849]
gi|408270785|gb|EKI90951.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1850]
gi|408273740|gb|EKI93782.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1856]
gi|408281883|gb|EKJ01251.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1862]
gi|408287940|gb|EKJ06780.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1864]
gi|408302916|gb|EKJ20392.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1868]
gi|408304086|gb|EKJ21524.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1866]
gi|408315475|gb|EKJ31791.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1869]
gi|408321080|gb|EKJ37131.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1870]
gi|408322492|gb|EKJ38477.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
NE098]
gi|408333887|gb|EKJ48806.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK523]
gi|408341340|gb|EKJ55794.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
0.1304]
gi|408544577|gb|EKK22028.1| transcriptional regulatory protein zraR [Escherichia coli 3.4870]
gi|408545388|gb|EKK22823.1| transcriptional regulatory protein zraR [Escherichia coli 6.0172]
gi|408562950|gb|EKK39097.1| transcriptional regulatory protein zraR [Escherichia coli 8.0586]
gi|408575463|gb|EKK51133.1| transcriptional regulatory protein zraR [Escherichia coli 10.0833]
gi|408578151|gb|EKK53688.1| transcriptional regulatory protein zraR [Escherichia coli 8.2524]
gi|408593036|gb|EKK67377.1| transcriptional regulatory protein zraR [Escherichia coli 88.0221]
gi|408598657|gb|EKK72609.1| transcriptional regulatory protein zraR [Escherichia coli 8.0416]
gi|408608255|gb|EKK81656.1| transcriptional regulatory protein zraR [Escherichia coli 10.0821]
gi|427201024|gb|EKV71430.1| transcriptional regulatory protein zraR [Escherichia coli 88.1042]
gi|427201071|gb|EKV71471.1| transcriptional regulatory protein zraR [Escherichia coli 89.0511]
gi|427204141|gb|EKV74427.1| transcriptional regulatory protein zraR [Escherichia coli 88.1467]
gi|427217157|gb|EKV86229.1| transcriptional regulatory protein zraR [Escherichia coli 90.0091]
gi|427221044|gb|EKV89924.1| transcriptional regulatory protein zraR [Escherichia coli 90.2281]
gi|427223716|gb|EKV92446.1| transcriptional regulatory protein zraR [Escherichia coli 90.0039]
gi|427237446|gb|EKW04987.1| transcriptional regulatory protein zraR [Escherichia coli 93.0056]
gi|427237560|gb|EKW05094.1| transcriptional regulatory protein zraR [Escherichia coli 93.0055]
gi|427241819|gb|EKW09240.1| transcriptional regulatory protein zraR [Escherichia coli 94.0618]
gi|427255502|gb|EKW21766.1| transcriptional regulatory protein zraR [Escherichia coli 95.0183]
gi|427257039|gb|EKW23180.1| transcriptional regulatory protein zraR [Escherichia coli 95.0943]
gi|427257238|gb|EKW23370.1| transcriptional regulatory protein zraR [Escherichia coli 95.1288]
gi|427272801|gb|EKW37520.1| transcriptional regulatory protein zraR [Escherichia coli 96.0428]
gi|427274410|gb|EKW39068.1| transcriptional regulatory protein zraR [Escherichia coli 96.0427]
gi|427280132|gb|EKW44511.1| transcriptional regulatory protein zraR [Escherichia coli 96.0939]
gi|427288694|gb|EKW52309.1| transcriptional regulatory protein zraR [Escherichia coli 96.0932]
gi|427295560|gb|EKW58661.1| transcriptional regulatory protein zraR [Escherichia coli 96.0107]
gi|427296909|gb|EKW59954.1| transcriptional regulatory protein zraR [Escherichia coli 97.0003]
gi|427307232|gb|EKW69713.1| transcriptional regulatory protein zraR [Escherichia coli 97.1742]
gi|427310044|gb|EKW72315.1| transcriptional regulatory protein zraR [Escherichia coli 97.0007]
gi|427314908|gb|EKW76930.1| transcriptional regulatory protein zraR [Escherichia coli 99.0672]
gi|427324609|gb|EKW86077.1| transcriptional regulatory protein zraR [Escherichia coli 99.0678]
gi|427325620|gb|EKW87056.1| transcriptional regulatory protein zraR [Escherichia coli 99.0713]
gi|429250416|gb|EKY35076.1| transcriptional regulatory protein zraR [Escherichia coli 96.0109]
gi|429250913|gb|EKY35551.1| transcriptional regulatory protein zraR [Escherichia coli 97.0010]
gi|444534690|gb|ELV14894.1| transcriptional regulatory protein zraR [Escherichia coli 99.0814]
gi|444545018|gb|ELV23982.1| transcriptional regulatory protein zraR [Escherichia coli 99.0815]
gi|444553895|gb|ELV31487.1| transcriptional regulatory protein zraR [Escherichia coli 99.0816]
gi|444555426|gb|ELV32895.1| transcriptional regulatory protein zraR [Escherichia coli 99.0839]
gi|444558964|gb|ELV36223.1| transcriptional regulatory protein zraR [Escherichia coli 99.0848]
gi|444568527|gb|ELV45200.1| transcriptional regulatory protein zraR [Escherichia coli 99.1753]
gi|444571723|gb|ELV48192.1| transcriptional regulatory protein zraR [Escherichia coli 99.1775]
gi|444587586|gb|ELV63015.1| transcriptional regulatory protein zraR [Escherichia coli 99.1805]
gi|444588916|gb|ELV64275.1| transcriptional regulatory protein zraR [Escherichia coli PA11]
gi|444602808|gb|ELV77538.1| transcriptional regulatory protein zraR [Escherichia coli PA13]
gi|444602837|gb|ELV77566.1| transcriptional regulatory protein zraR [Escherichia coli PA19]
gi|444611988|gb|ELV86299.1| transcriptional regulatory protein zraR [Escherichia coli PA2]
gi|444618339|gb|ELV92425.1| transcriptional regulatory protein zraR [Escherichia coli PA47]
gi|444626063|gb|ELV99869.1| transcriptional regulatory protein zraR [Escherichia coli PA8]
gi|444634751|gb|ELW08206.1| transcriptional regulatory protein zraR [Escherichia coli 7.1982]
gi|444636484|gb|ELW09881.1| transcriptional regulatory protein zraR [Escherichia coli 99.1781]
gi|444641654|gb|ELW14882.1| transcriptional regulatory protein zraR [Escherichia coli 99.1762]
gi|444650934|gb|ELW23747.1| transcriptional regulatory protein zraR [Escherichia coli PA35]
gi|444658746|gb|ELW31184.1| transcriptional regulatory protein zraR [Escherichia coli 95.0083]
gi|444666371|gb|ELW38445.1| transcriptional regulatory protein zraR [Escherichia coli 99.0670]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|222524928|ref|YP_002569399.1| winged helix family two component transcriptional regulator
[Chloroflexus sp. Y-400-fl]
gi|222448807|gb|ACM53073.1| two component transcriptional regulator, winged helix family
[Chloroflexus sp. Y-400-fl]
Length = 245
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 4/138 (2%)
Query: 17 IDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISD 76
+D+ P R+L DDD + ++++ L QYE TV + AL+ R +DL+ D
Sbjct: 12 VDQPPPKRRILVADDDPSIGRLIQTALPTQQYETTVVANGLEALEAF--ERETYDLIFLD 69
Query: 77 VYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTW 136
V MP +DGF E + + D+P+V+++A T +++G GA +Y+ KP ++ E
Sbjct: 70 VMMPFVDGFDACERIRAKSDVPIVIITAREGTDDIVQGFRRGADEYITKPFKVAEFVARV 129
Query: 137 QHVIRRKKVDPKDQNRSP 154
+ ++RR VD + +P
Sbjct: 130 EAILRR--VDMQKARTAP 145
>gi|436835258|ref|YP_007320474.1| adenylate/guanylate cyclase [Fibrella aestuarina BUZ 2]
gi|384066671|emb|CCG99881.1| adenylate/guanylate cyclase [Fibrella aestuarina BUZ 2]
Length = 359
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 25 RVLAVDDDQTC-LKILEKF---LRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
++L VDD+ L I +KF +RE QYE + + A+ ++ N + D+V+SD+ MP
Sbjct: 16 KILVVDDEPDLELLIKQKFRRQIREQQYEFSFAQNGLEAIAQIQRN-PDIDVVLSDINMP 74
Query: 81 DMDGFKLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
+MDG LL +L L L VM+SAY D + + +N GA D++ KPV E+L+ T Q
Sbjct: 75 EMDGLTLLTKLAELNPILKAVMVSAYGDMENIRTAMNRGAYDFVCKPVNFEDLELTMQKT 134
Query: 140 IR 141
IR
Sbjct: 135 IR 136
>gi|260858114|ref|YP_003232005.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. 11368]
gi|415785483|ref|ZP_11492983.1| transcriptional regulatory protein zraR [Escherichia coli EPECa14]
gi|417296921|ref|ZP_12084168.1| transcriptional regulator ZraR [Escherichia coli 900105 (10e)]
gi|419212552|ref|ZP_13755611.1| response regulator [Escherichia coli DEC8C]
gi|419218344|ref|ZP_13761330.1| response regulator [Escherichia coli DEC8D]
gi|419258215|ref|ZP_13800693.1| response regulator [Escherichia coli DEC10A]
gi|419258314|ref|ZP_13800789.1| response regulator [Escherichia coli DEC10B]
gi|419264358|ref|ZP_13806754.1| response regulator [Escherichia coli DEC10C]
gi|419274646|ref|ZP_13816935.1| response regulator [Escherichia coli DEC10D]
gi|419877926|ref|ZP_14399429.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9534]
gi|419883864|ref|ZP_14404907.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9545]
gi|419903934|ref|ZP_14422946.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM9942]
gi|419909822|ref|ZP_14428358.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10026]
gi|420103936|ref|ZP_14614727.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9455]
gi|420110729|ref|ZP_14620662.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9553]
gi|420118128|ref|ZP_14627465.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10021]
gi|420123125|ref|ZP_14632023.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10030]
gi|420128695|ref|ZP_14637245.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10224]
gi|420136116|ref|ZP_14644181.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM9952]
gi|424748772|ref|ZP_18176900.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CFSAN001629]
gi|424766577|ref|ZP_18193927.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CFSAN001630]
gi|425382370|ref|ZP_18766340.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1865]
gi|257756763|dbj|BAI28265.1| fused DNA-binding response regulator ZraR in two-component
regulatory system with ZraS: response regulator/sigma 54
interaction protein [Escherichia coli O26:H11 str.
11368]
gi|323155546|gb|EFZ41723.1| transcriptional regulatory protein zraR [Escherichia coli EPECa14]
gi|378047529|gb|EHW09892.1| response regulator [Escherichia coli DEC8C]
gi|378057375|gb|EHW19608.1| response regulator [Escherichia coli DEC8D]
gi|378093222|gb|EHW55039.1| response regulator [Escherichia coli DEC10A]
gi|378113832|gb|EHW75392.1| response regulator [Escherichia coli DEC10D]
gi|378120423|gb|EHW81900.1| response regulator [Escherichia coli DEC10B]
gi|378120662|gb|EHW82132.1| response regulator [Escherichia coli DEC10C]
gi|386260365|gb|EIJ15839.1| transcriptional regulator ZraR [Escherichia coli 900105 (10e)]
gi|388337644|gb|EIL04142.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9534]
gi|388356951|gb|EIL21583.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9545]
gi|388368693|gb|EIL32317.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM9942]
gi|388372441|gb|EIL35865.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10026]
gi|394384916|gb|EJE62467.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10224]
gi|394401182|gb|EJE77027.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10021]
gi|394401723|gb|EJE77502.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9553]
gi|394406026|gb|EJE81109.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9455]
gi|394417578|gb|EJE91302.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10030]
gi|394418916|gb|EJE92558.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM9952]
gi|408292830|gb|EKJ11323.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1865]
gi|421934521|gb|EKT92285.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CFSAN001630]
gi|421943584|gb|EKU00866.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CFSAN001629]
Length = 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDTLQATLEKAL 121
>gi|385681806|ref|ZP_10055734.1| two-component system response regulator [Amycolatopsis sp. ATCC
39116]
Length = 254
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 74/135 (54%), Gaps = 10/135 (7%)
Query: 23 GMRVLAVDDDQTCLKILEKFLRECQ--YEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
G+RVLAVDD L+ + + LRE EVT A+TAL+M++ R FD V D+ MP
Sbjct: 3 GLRVLAVDDVPPALEDICQLLREAPEVAEVTGAGDALTALRMIQSER--FDAVFLDISMP 60
Query: 81 DMDGFKLLELVGLEMDLPV-VMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
+DG +L L+ + PV V ++A+ + GI GA DYLLKPVR E L V
Sbjct: 61 GLDGLELAGLLAKLSEPPVIVFVTAHDGHAVTAYGI--GAVDYLLKPVRAERLSAALGKV 118
Query: 140 IRRKKVDPKDQNRSP 154
+R + P RSP
Sbjct: 119 LR---MLPAGAPRSP 130
>gi|421847857|ref|ZP_16280987.1| transcriptional regulatory protein ZraR [Citrobacter freundii ATCC
8090 = MTCC 1658]
gi|411770738|gb|EKS54487.1| transcriptional regulatory protein ZraR [Citrobacter freundii ATCC
8090 = MTCC 1658]
Length = 441
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR YEV + AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWSYEVALAYSGRAALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++A+S + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAFSSVETAVEALKTGALDYLIKPLDFDRLQETLEKAL 121
>gi|444927761|ref|ZP_21247010.1| transcriptional regulatory protein zraR [Escherichia coli
09BKT078844]
gi|444535903|gb|ELV15952.1| transcriptional regulatory protein zraR [Escherichia coli
09BKT078844]
Length = 441
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|117626266|ref|YP_859589.1| transcriptional regulatory protein ZraR [Escherichia coli APEC O1]
gi|218561070|ref|YP_002393983.1| transcriptional regulatory protein ZraR [Escherichia coli S88]
gi|237702771|ref|ZP_04533252.1| transcriptional regulatory protein ZraR [Escherichia sp. 3_2_53FAA]
gi|386602040|ref|YP_006103546.1| response regulator ZraR [Escherichia coli IHE3034]
gi|419943226|ref|ZP_14459787.1| transcriptional regulatory protein ZraR [Escherichia coli HM605]
gi|422752521|ref|ZP_16806421.1| sigma-54 interaction domain-containing protein [Escherichia coli
H252]
gi|422757783|ref|ZP_16811598.1| sigma-54 interaction domain-containing protein [Escherichia coli
H263]
gi|422842253|ref|ZP_16890217.1| transcriptional regulatory protein zraR [Escherichia coli H397]
gi|432360473|ref|ZP_19603682.1| transcriptional regulatory protein zraR [Escherichia coli KTE4]
gi|432365274|ref|ZP_19608425.1| transcriptional regulatory protein zraR [Escherichia coli KTE5]
gi|432590475|ref|ZP_19826822.1| transcriptional regulatory protein zraR [Escherichia coli KTE58]
gi|432600157|ref|ZP_19836424.1| transcriptional regulatory protein zraR [Escherichia coli KTE62]
gi|432756977|ref|ZP_19991518.1| transcriptional regulatory protein zraR [Escherichia coli KTE22]
gi|432781182|ref|ZP_20015395.1| transcriptional regulatory protein zraR [Escherichia coli KTE59]
gi|432790045|ref|ZP_20024170.1| transcriptional regulatory protein zraR [Escherichia coli KTE65]
gi|432818812|ref|ZP_20052531.1| transcriptional regulatory protein zraR [Escherichia coli KTE118]
gi|432824942|ref|ZP_20058603.1| transcriptional regulatory protein zraR [Escherichia coli KTE123]
gi|433002962|ref|ZP_20191467.1| transcriptional regulatory protein zraR [Escherichia coli KTE227]
gi|433010222|ref|ZP_20198630.1| transcriptional regulatory protein zraR [Escherichia coli KTE229]
gi|433156256|ref|ZP_20341174.1| transcriptional regulatory protein zraR [Escherichia coli KTE176]
gi|433166042|ref|ZP_20350761.1| transcriptional regulatory protein zraR [Escherichia coli KTE179]
gi|433171040|ref|ZP_20355649.1| transcriptional regulatory protein zraR [Escherichia coli KTE180]
gi|115515390|gb|ABJ03465.1| ZraR, fused DNA-binding response regulator in two-component
regulatory system with ZraS: response regulator/sigma54
interaction protein [Escherichia coli APEC O1]
gi|218367839|emb|CAR05634.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein [Escherichia coli S88]
gi|226903084|gb|EEH89343.1| transcriptional regulatory protein ZraR [Escherichia sp. 3_2_53FAA]
gi|294492135|gb|ADE90891.1| response regulator ZraR [Escherichia coli IHE3034]
gi|323948825|gb|EGB44722.1| sigma-54 interaction domain-containing protein [Escherichia coli
H252]
gi|323953784|gb|EGB49591.1| sigma-54 interaction domain-containing protein [Escherichia coli
H263]
gi|371601635|gb|EHN90366.1| transcriptional regulatory protein zraR [Escherichia coli H397]
gi|388421454|gb|EIL81069.1| transcriptional regulatory protein ZraR [Escherichia coli HM605]
gi|430872465|gb|ELB96070.1| transcriptional regulatory protein zraR [Escherichia coli KTE4]
gi|430882778|gb|ELC05851.1| transcriptional regulatory protein zraR [Escherichia coli KTE5]
gi|431116592|gb|ELE20030.1| transcriptional regulatory protein zraR [Escherichia coli KTE58]
gi|431127171|gb|ELE29481.1| transcriptional regulatory protein zraR [Escherichia coli KTE62]
gi|431298987|gb|ELF88609.1| transcriptional regulatory protein zraR [Escherichia coli KTE22]
gi|431323646|gb|ELG11123.1| transcriptional regulatory protein zraR [Escherichia coli KTE59]
gi|431334640|gb|ELG21798.1| transcriptional regulatory protein zraR [Escherichia coli KTE65]
gi|431372280|gb|ELG57943.1| transcriptional regulatory protein zraR [Escherichia coli KTE118]
gi|431376938|gb|ELG62077.1| transcriptional regulatory protein zraR [Escherichia coli KTE123]
gi|431520392|gb|ELH97718.1| transcriptional regulatory protein zraR [Escherichia coli KTE229]
gi|431521014|gb|ELH98265.1| transcriptional regulatory protein zraR [Escherichia coli KTE227]
gi|431669091|gb|ELJ35526.1| transcriptional regulatory protein zraR [Escherichia coli KTE176]
gi|431682555|gb|ELJ48318.1| transcriptional regulatory protein zraR [Escherichia coli KTE179]
gi|431682905|gb|ELJ48551.1| transcriptional regulatory protein zraR [Escherichia coli KTE180]
Length = 441
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L++T + +
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSIETAVEALKTGALDYLIKPLDFDNLQSTLEKAL 121
>gi|420327657|ref|ZP_14829397.1| transcriptional regulatory protein zraR [Shigella flexneri CCH060]
gi|391246721|gb|EIQ05980.1| transcriptional regulatory protein zraR [Shigella flexneri CCH060]
Length = 408
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQAT 116
>gi|422964121|ref|ZP_16973330.1| transcriptional regulatory protein zraR [Escherichia coli H494]
gi|371591560|gb|EHN80516.1| transcriptional regulatory protein zraR [Escherichia coli H494]
Length = 441
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANGGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|334341693|ref|YP_004546673.1| response regulator receiver [Desulfotomaculum ruminis DSM 2154]
gi|334093047|gb|AEG61387.1| response regulator receiver [Desulfotomaculum ruminis DSM 2154]
Length = 224
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPD 81
+G R+L +DDD +L++ L Y V V N T L+M R N +L+I D+ MP
Sbjct: 1 MGARILVIDDDPKITAMLQRALVFEGYRVDVANDGYTGLQMARNNPP--ELLILDIMMPG 58
Query: 82 MDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIR 141
+DG++ + + +P+++LSA + + +KG+N GA DYL+KP +EEL Q ++R
Sbjct: 59 LDGWEFCQRFRKDNVIPILILSAKDEVESRVKGLNLGADDYLVKPFALEELLARIQALLR 118
Query: 142 RKKV 145
R+ +
Sbjct: 119 RRAI 122
>gi|423393581|ref|ZP_17370806.1| hypothetical protein ICG_05428 [Bacillus cereus BAG1X1-3]
gi|401629272|gb|EJS47095.1| hypothetical protein ICG_05428 [Bacillus cereus BAG1X1-3]
Length = 228
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L V+DDQ +++++FL QY+V V + + +K N+ +FDL++ DV MP+++GF
Sbjct: 13 ILVVEDDQEIQELIKQFLMTQQYKVIVASDGLEGMKQF--NKQSFDLILLDVMMPNLNGF 70
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
+ +++ + ++P++ML+A + + MKG + G DY+ KP L + V+RR
Sbjct: 71 ETAKMIRGQSNIPIIMLTALEEEQDQMKGFDLGIDDYITKPFSFHVLMRRVEAVLRR 127
>gi|224138036|ref|XP_002326502.1| pseudo response regulator [Populus trichocarpa]
gi|222833824|gb|EEE72301.1| pseudo response regulator [Populus trichocarpa]
Length = 448
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHL-QKFRLSLK 247
+KK +V WT ELH KF+ AV LG+D+A+P +IL++M VEGLTR NVASHL QK+R+ +
Sbjct: 293 RKKMKVDWTPELHRKFVQAVEKLGVDQAIPSRILEVMKVEGLTRHNVASHLQQKYRMHRR 352
Query: 248 RLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHS 283
+ K E SY + + HS
Sbjct: 353 HILPKEDERQWTQHRDQVQRSYYPHKPIMAYPPYHS 388
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL +D+D ++ L Y V AL + +F + I +V M
Sbjct: 14 FPKGLRVLLLDEDSMSAAEIKSKLEAMDYIVYTFCNETEALSAISNEPGSFHVAIVEVSM 73
Query: 80 PDMD-GFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
+ FK LE DLP +M S+ +MK I GA ++L KP+ ++L+N WQH
Sbjct: 74 SNSSRSFKFLET---SKDLPTIMTSSIDCLNTMMKCIALGAVEFLRKPLSEDKLRNIWQH 130
Query: 139 VIRR 142
V+ +
Sbjct: 131 VVHK 134
>gi|307105497|gb|EFN53746.1| hypothetical protein CHLNCDRAFT_136336 [Chlorella variabilis]
Length = 575
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLG-LDKAVPKKILDLMNVEGLTRENVASHLQK 241
+++ KK R++WT LH +F+ AVN +G +DKA+PK ++ M V GLTRENVASHLQK
Sbjct: 459 DDDPCALKKARLIWTPALHRRFLEAVNRVGGVDKALPKAVMKEMGVSGLTRENVASHLQK 518
Query: 242 FRLSLKR 248
R+ LK+
Sbjct: 519 HRMRLKK 525
>gi|289524120|ref|ZP_06440974.1| DNA-binding response regulator ArlR [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289502776|gb|EFD23940.1| DNA-binding response regulator ArlR [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 228
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
MRVL DDD + L+ L + L +Y V + I A+ L + FDLVI DV MP +D
Sbjct: 2 MRVLIADDDTSLLEQLREILASERYTVDTASNGIEAMDKLYDA--VFDLVILDVMMPHID 59
Query: 84 GFKLLELVGLE-MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
G LLE + +++PV+ML+A D + +KG+N GA DYL KP ++EL + ++RR
Sbjct: 60 GLSLLEQIRKGGINIPVLMLTAKGDVEDKVKGLNLGADDYLAKPFSIDELLARVRALLRR 119
>gi|417235421|ref|ZP_12034541.1| transcriptional regulator ZraR [Escherichia coli 9.0111]
gi|386214971|gb|EII25375.1| transcriptional regulator ZraR [Escherichia coli 9.0111]
Length = 441
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y + + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNIALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|417088070|ref|ZP_11954841.1| transcriptional regulatory protein ZraR [Escherichia coli
cloneA_i1]
gi|355349344|gb|EHF98552.1| transcriptional regulatory protein ZraR [Escherichia coli
cloneA_i1]
Length = 441
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L++T + +
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSIETAVEALKTGALDYLIKPLDFDNLQSTLEKAL 121
>gi|300865288|ref|ZP_07110102.1| Response regulator receiver domain protein [Oscillatoria sp. PCC
6506]
gi|300336761|emb|CBN55252.1| Response regulator receiver domain protein [Oscillatoria sp. PCC
6506]
Length = 403
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDD+QT L +L FLR C ++V V +A++ L R DL++ DV MP +DGF
Sbjct: 11 ILIVDDNQTNLDVLFDFLRNCNFKVLVALDGESAIEQLEYVRP--DLILLDVMMPGIDGF 68
Query: 86 KL---LELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
+ L+ + D+PV+ ++A SDT ++G GA DY+ KP + EE+ + Q +
Sbjct: 69 ETCSRLKAIPATKDIPVIFMTALSDTVNKVRGFQSGAVDYITKPFQHEEVLSRIQTHLTI 128
Query: 143 KKVDPKDQNRS 153
K+ K Q ++
Sbjct: 129 CKLQKKLQEKN 139
>gi|432394687|ref|ZP_19637499.1| transcriptional regulatory protein zraR [Escherichia coli KTE21]
gi|432545865|ref|ZP_19782683.1| transcriptional regulatory protein zraR [Escherichia coli KTE236]
gi|432551346|ref|ZP_19788090.1| transcriptional regulatory protein zraR [Escherichia coli KTE237]
gi|432624398|ref|ZP_19860407.1| transcriptional regulatory protein zraR [Escherichia coli KTE76]
gi|430913055|gb|ELC34190.1| transcriptional regulatory protein zraR [Escherichia coli KTE21]
gi|431069651|gb|ELD77976.1| transcriptional regulatory protein zraR [Escherichia coli KTE236]
gi|431075246|gb|ELD82777.1| transcriptional regulatory protein zraR [Escherichia coli KTE237]
gi|431154706|gb|ELE55468.1| transcriptional regulatory protein zraR [Escherichia coli KTE76]
Length = 441
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGQQALAQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|419807301|ref|ZP_14332366.1| transcriptional regulatory protein ZraR [Escherichia coli AI27]
gi|384469706|gb|EIE53852.1| transcriptional regulatory protein ZraR [Escherichia coli AI27]
Length = 441
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 VTLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDTLQATLEKAL 121
>gi|423468527|ref|ZP_17445293.1| hypothetical protein IEK_05712 [Bacillus cereus BAG6O-1]
gi|402409968|gb|EJV42383.1| hypothetical protein IEK_05712 [Bacillus cereus BAG6O-1]
Length = 221
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L V+DDQ +++++FL QY+V V + + +K N+ +FDL++ DV MP+++GF
Sbjct: 6 ILVVEDDQEIQELIKQFLMTQQYKVIVASDGLEGMKQF--NKQSFDLILLDVMMPNLNGF 63
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
++ +++ + ++P+++L+A + + MKG + G DY+ KP L + V+RR
Sbjct: 64 EVAKMIRSQSNIPIILLTALEEEQDQMKGFDLGIDDYITKPFSFHVLMRRVEAVLRR 120
>gi|224097311|ref|XP_002310903.1| predicted protein [Populus trichocarpa]
gi|222853806|gb|EEE91353.1| predicted protein [Populus trichocarpa]
Length = 408
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 181 HENENSTTQKKPRVVWTTELHTKFIGAVNLL-GLDKAVPKKILDLMNVEGLTRENVASHL 239
H + S+T KPR+ WT ELH +F+ AVN L G +KA PK +L LMNV+GLT +V SHL
Sbjct: 179 HPSPGSSTAHKPRMRWTPELHERFVEAVNKLDGAEKATPKGVLKLMNVKGLTIYHVKSHL 238
Query: 240 QKFRLSLKRLGNKTLEAGMVASVGSKDSS 268
QK+RL+ K L K E S K +S
Sbjct: 239 QKYRLA-KYLPEKKEEKKASCSEEKKVAS 266
>gi|432856080|ref|ZP_20083687.1| transcriptional regulatory protein zraR [Escherichia coli KTE144]
gi|431396308|gb|ELG79790.1| transcriptional regulatory protein zraR [Escherichia coli KTE144]
Length = 441
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGQQALAQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|410462149|ref|ZP_11315750.1| response regulator (CheY-like receiver, AAA-type ATPase and
DNA-binding domain containing protein) [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409984732|gb|EKO41020.1| response regulator (CheY-like receiver, AAA-type ATPase and
DNA-binding domain containing protein) [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 460
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD L++LE L Y+V N + AL++L +R LVISD+ MP MDG
Sbjct: 12 ILVVDDDPHILEVLEVRLVSAGYDVVAANNGLEALEVL--SRQPVRLVISDMRMPGMDGM 69
Query: 86 KLLELVGLEMD-----LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEEL 132
++LE EM+ LP++ L+A+ ++ I HGA DYL KP +EL
Sbjct: 70 RMLE----EMERRGIKLPIIFLTAHGSIPGAVEAIKHGAVDYLTKPFDGQEL 117
>gi|397904466|ref|ZP_10505377.1| Response regulator (CheY-like receiver domain and HTH-type
DNA-binding domain) [Caloramator australicus RC3]
gi|397162476|emb|CCJ32711.1| Response regulator (CheY-like receiver domain and HTH-type
DNA-binding domain) [Caloramator australicus RC3]
Length = 225
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 76/129 (58%), Gaps = 4/129 (3%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+L VDDD +LE +L + Y+V N + ALK+ +E + DL++ DV MP +DG
Sbjct: 4 RILIVDDDVNICDLLEIYLEKEGYKVYKANSGVDALKIFKERQ--LDLIVLDVMMPGLDG 61
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
++ L+ + +PVVML+A +T + G+ GA DY++KP +EL + V+RR K
Sbjct: 62 YETLKEIRKTSAIPVVMLTAKGETFDRVLGLELGADDYIVKPFEPKELVARIRAVLRRYK 121
Query: 145 VDPKDQNRS 153
P+ Q +S
Sbjct: 122 --PQVQKKS 128
>gi|421725181|ref|ZP_16164380.1| transcriptional regulatory protein ZraR [Klebsiella oxytoca M5al]
gi|20141026|sp|Q9APD9.1|ZRAR_KLEOX RecName: Full=Transcriptional regulatory protein ZraR
gi|12584125|gb|AAG59807.1|AF305914_2 HydG [Klebsiella oxytoca]
gi|410374077|gb|EKP28759.1| transcriptional regulatory protein ZraR [Klebsiella oxytoca M5al]
Length = 443
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 3/130 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N + AL+ +RE FDLV+ D+ M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYRVALANNGLQALEKVREK--VFDLVLCDIRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
+ L E+ +PV++++AYS ++ + GA DYL+KP+ ++L+ T + +
Sbjct: 66 ETLKEIKTFNPSIPVLIMTAYSSVDTAVEALKSGALDYLIKPLDFDKLQLTLSEALAHTR 125
Query: 145 VDPKDQNRSP 154
+ +P
Sbjct: 126 LSESPVTETP 135
>gi|416319542|ref|ZP_11662094.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O157:H7 str. EC1212]
gi|420300246|ref|ZP_14802290.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW09109]
gi|420312590|ref|ZP_14814510.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1738]
gi|424086743|ref|ZP_17823208.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA517]
gi|424099849|ref|ZP_17835081.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1985]
gi|424137293|ref|ZP_17869708.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA10]
gi|425106900|ref|ZP_18509195.1| transcriptional regulatory protein zraR [Escherichia coli 5.2239]
gi|425202557|ref|ZP_18598746.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
NE037]
gi|425297489|ref|ZP_18687592.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA38]
gi|444972242|ref|ZP_21289566.1| transcriptional regulatory protein zraR [Escherichia coli 99.1793]
gi|445047880|ref|ZP_21363114.1| transcriptional regulatory protein zraR [Escherichia coli 3.4880]
gi|320190898|gb|EFW65548.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O157:H7 str. EC1212]
gi|390637968|gb|EIN17497.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA517]
gi|390655575|gb|EIN33502.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1985]
gi|390691573|gb|EIN66310.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA10]
gi|390805479|gb|EIO72424.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW09109]
gi|390897400|gb|EIP56729.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1738]
gi|408112214|gb|EKH43883.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
NE037]
gi|408209946|gb|EKI34521.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA38]
gi|408544317|gb|EKK21775.1| transcriptional regulatory protein zraR [Escherichia coli 5.2239]
gi|444575229|gb|ELV51478.1| transcriptional regulatory protein zraR [Escherichia coli 99.1793]
gi|444656713|gb|ELW29233.1| transcriptional regulatory protein zraR [Escherichia coli 3.4880]
Length = 441
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|302754156|ref|XP_002960502.1| hypothetical protein SELMODRAFT_402806 [Selaginella moellendorffii]
gi|300171441|gb|EFJ38041.1| hypothetical protein SELMODRAFT_402806 [Selaginella moellendorffii]
Length = 271
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%)
Query: 178 DDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVAS 237
++ + E S T KK +V W +LH F+ V LGL+KA+P +IL++M VE LTR NVAS
Sbjct: 102 ENCRKKERSLTTKKTKVDWNPDLHRLFVQTVEELGLEKAIPSRILEIMGVESLTRHNVAS 161
Query: 238 HLQKFRLSLKR 248
HLQK+R KR
Sbjct: 162 HLQKYRAQRKR 172
>gi|432768370|ref|ZP_20002759.1| transcriptional regulatory protein zraR [Escherichia coli KTE50]
gi|432957948|ref|ZP_20149157.1| transcriptional regulatory protein zraR [Escherichia coli KTE202]
gi|433065470|ref|ZP_20252366.1| transcriptional regulatory protein zraR [Escherichia coli KTE125]
gi|431321634|gb|ELG09235.1| transcriptional regulatory protein zraR [Escherichia coli KTE50]
gi|431485307|gb|ELH64970.1| transcriptional regulatory protein zraR [Escherichia coli KTE202]
gi|431577277|gb|ELI49922.1| transcriptional regulatory protein zraR [Escherichia coli KTE125]
Length = 441
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGQQALAQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|432716634|ref|ZP_19951644.1| transcriptional regulatory protein zraR [Escherichia coli KTE9]
gi|431269411|gb|ELF60763.1| transcriptional regulatory protein zraR [Escherichia coli KTE9]
Length = 441
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGQQALAQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|24115288|ref|NP_709798.1| transcriptional regulatory protein ZraR [Shigella flexneri 2a str.
301]
gi|30064714|ref|NP_838885.1| transcriptional regulatory protein ZraR [Shigella flexneri 2a str.
2457T]
gi|384545601|ref|YP_005729665.1| Two component, sigma54 specific, transcriptional regulator, Fis
family [Shigella flexneri 2002017]
gi|415856958|ref|ZP_11531787.1| transcriptional regulatory protein zraR [Shigella flexneri 2a str.
2457T]
gi|417704190|ref|ZP_12353292.1| transcriptional regulatory protein zraR [Shigella flexneri K-218]
gi|417724993|ref|ZP_12373786.1| transcriptional regulatory protein zraR [Shigella flexneri K-304]
gi|417726257|ref|ZP_12375018.1| transcriptional regulatory protein zraR [Shigella flexneri K-671]
gi|417736640|ref|ZP_12385269.1| transcriptional regulatory protein zraR [Shigella flexneri 2747-71]
gi|417740419|ref|ZP_12388987.1| transcriptional regulatory protein zraR [Shigella flexneri 4343-70]
gi|417746363|ref|ZP_12394873.1| response regulator [Shigella flexneri 2930-71]
gi|418252400|ref|ZP_12878173.1| response regulator [Shigella flexneri 6603-63]
gi|420339369|ref|ZP_14840912.1| transcriptional regulatory protein zraR [Shigella flexneri K-404]
gi|420376130|ref|ZP_14875918.1| transcriptional regulatory protein zraR [Shigella flexneri 1235-66]
gi|24054583|gb|AAN45505.1| response regulator of hydrogenase 3 activity (sensor HydH)
[Shigella flexneri 2a str. 301]
gi|30042974|gb|AAP18696.1| response regulator of hydrogenase 3 activity (sensor HydH)
[Shigella flexneri 2a str. 2457T]
gi|281603388|gb|ADA76372.1| Two component, sigma54 specific, transcriptional regulator, Fis
family [Shigella flexneri 2002017]
gi|313648655|gb|EFS13095.1| transcriptional regulatory protein zraR [Shigella flexneri 2a str.
2457T]
gi|332749202|gb|EGJ79624.1| transcriptional regulatory protein zraR [Shigella flexneri 2747-71]
gi|332751441|gb|EGJ81843.1| transcriptional regulatory protein zraR [Shigella flexneri 4343-70]
gi|332762843|gb|EGJ93102.1| response regulator [Shigella flexneri 2930-71]
gi|332765543|gb|EGJ95757.1| transcriptional regulatory protein zraR [Shigella flexneri K-671]
gi|332998986|gb|EGK18576.1| transcriptional regulatory protein zraR [Shigella flexneri K-218]
gi|333014344|gb|EGK33697.1| transcriptional regulatory protein zraR [Shigella flexneri K-304]
gi|391276090|gb|EIQ34869.1| transcriptional regulatory protein zraR [Shigella flexneri K-404]
gi|391306924|gb|EIQ64670.1| transcriptional regulatory protein zraR [Shigella flexneri 1235-66]
gi|397902410|gb|EJL18729.1| response regulator [Shigella flexneri 6603-63]
Length = 441
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGAQDYLIKPLDFDNLQATLEKAL 121
>gi|417287781|ref|ZP_12075067.1| transcriptional regulator ZraR [Escherichia coli TW07793]
gi|386248566|gb|EII94738.1| transcriptional regulator ZraR [Escherichia coli TW07793]
Length = 441
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|227885465|ref|ZP_04003270.1| transcriptional regulatory protein ZraR [Escherichia coli 83972]
gi|386641655|ref|YP_006108453.1| transcriptional regulator [Escherichia coli ABU 83972]
gi|432414318|ref|ZP_19656967.1| transcriptional regulatory protein zraR [Escherichia coli KTE39]
gi|432493276|ref|ZP_19735102.1| transcriptional regulatory protein zraR [Escherichia coli KTE214]
gi|227837539|gb|EEJ48005.1| transcriptional regulatory protein ZraR [Escherichia coli 83972]
gi|307556147|gb|ADN48922.1| transcriptional regulatory protein [Escherichia coli ABU 83972]
gi|430931712|gb|ELC52151.1| transcriptional regulatory protein zraR [Escherichia coli KTE39]
gi|431030175|gb|ELD43190.1| transcriptional regulatory protein zraR [Escherichia coli KTE214]
Length = 441
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|300776266|ref|ZP_07086124.1| DNA-binding response regulator [Chryseobacterium gleum ATCC 35910]
gi|300501776|gb|EFK32916.1| DNA-binding response regulator [Chryseobacterium gleum ATCC 35910]
Length = 234
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 3/118 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L V+DD K++ K +E Q+EVTV + +K+ +N +FDL+++D+ +P DG
Sbjct: 4 ILLVEDDDRLSKLIAKGFQEAQFEVTVAYDGNSGMKLALQN--HFDLIVTDIVLPKKDGL 61
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
+ E+ L+ DLPV+ML+A T ++G + GA DYL KP M EL + +++R
Sbjct: 62 EFCNEIKALKPDLPVIMLTALGTTDDKLEGFDAGADDYLTKPFEMRELVARIKVLLKR 119
>gi|389815740|ref|ZP_10206995.1| two-component response regulator [Planococcus antarcticus DSM
14505]
gi|388465707|gb|EIM08022.1| two-component response regulator [Planococcus antarcticus DSM
14505]
Length = 225
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 6/141 (4%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
+VL VDD++ L ++ +LR Y T + AL +L N+ FDLV+ D+ MPD+DG
Sbjct: 6 KVLLVDDEKRMLDLVALYLRPHDYACTKASSGKQALDLL--NKEAFDLVLLDIMMPDIDG 63
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR-- 142
+++ + +PV+ML+A + ++KG+ GA DY+ KP EEL + V+RR
Sbjct: 64 WEVCREIRKFSTIPVIMLTAREQQEDIVKGLRLGADDYMTKPFGEEELLARMEAVLRRSL 123
Query: 143 --KKVDPKDQNRSPHEFEKSY 161
K+++ + FE SY
Sbjct: 124 PSKRIEIEGLTWEEDRFELSY 144
>gi|433132587|ref|ZP_20318002.1| transcriptional regulatory protein zraR [Escherichia coli KTE163]
gi|431641404|gb|ELJ09145.1| transcriptional regulatory protein zraR [Escherichia coli KTE163]
Length = 441
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVETLKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|113474513|ref|YP_720574.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
gi|110165561|gb|ABG50101.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
Length = 1130
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+L VDD+ +++L +L+ Y+VT AL L EN +NFDL++ D+ MP+M
Sbjct: 719 FHILVVDDEPINIQVLNNYLKANNYQVTQALSGKEALAAL-ENNHNFDLILLDIMMPNMT 777
Query: 84 GFKLLELVGLEM---DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G+++ + + LPV+ML+A + ++ G GA DYL KP +EL Q I
Sbjct: 778 GYEVCSQIREKYPAQSLPVLMLTAKNQIADLVMGFQFGANDYLTKPFAKDELLTRIQTHI 837
Query: 141 RRKKVDPKDQNRSPHEF 157
+ K+ + PHE+
Sbjct: 838 KLSKITKAYERFVPHEY 854
>gi|389581397|ref|ZP_10171424.1| diguanylate cyclase (GGDEF) domain-containing protein
[Desulfobacter postgatei 2ac9]
gi|389403032|gb|EIM65254.1| diguanylate cyclase (GGDEF) domain-containing protein
[Desulfobacter postgatei 2ac9]
Length = 361
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 153/341 (44%), Gaps = 58/341 (17%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
P+ +L VDDD + +E+FL YEV + A A+ +L+ + D+V++D+ M
Sbjct: 62 PMAHAILIVDDDIAIKESVEEFLSLMDYEVKSADSAFQAVDILKTFKP--DIVLTDIMMQ 119
Query: 81 DMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
MDG +L L+ + D+ V++++ YS + IN GA D++ KP R EEL + ++
Sbjct: 120 GMDGLELTRLIRDQYDIDVMVMTGYSADYSYEEAINAGASDFIFKPFRFEELNLRIKRML 179
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTEL 200
R E ++++ +D+ +D + DG ++ Q ++ E
Sbjct: 180 R----------------EAAFKRERDKLLKDMKQLAITDGLTGLFNSRQFFHQIKQEVER 223
Query: 201 HTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEA-GMV 259
++ ++LL LD KK D HL+ G+K L + GM+
Sbjct: 224 SQRYSRNLSLLMLDIDFFKKYND-----------TWGHLE---------GDKVLMSMGMI 263
Query: 260 AS--VGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSYVPGSMIG-RLNSSAGLSM 316
S + S DS+Y R G G +V P + L+ + + GS I + + +
Sbjct: 264 ISSCLRSMDSAY-RYG-----GEEFAVILP----ETELNEACLVGSRIKDNVQKAVFIPK 313
Query: 317 HGIASSGMIKPGLSQSFN----TSFNTIGKNQQAMFPANRN 353
HG+ +S + G +Q TSF I + A++ + +N
Sbjct: 314 HGVKTSVTVSIGAAQIVKGEDLTSF--IKRTDNALYLSKKN 352
>gi|422357865|ref|ZP_16438528.1| response regulator receiver domain protein, partial [Escherichia
coli MS 110-3]
gi|315288330|gb|EFU47729.1| response regulator receiver domain protein [Escherichia coli MS
110-3]
Length = 417
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L++T + +
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSIETAVEALKTGALDYLIKPLDFDNLQSTLEKAL 121
>gi|375107110|ref|ZP_09753371.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Burkholderiales bacterium JOSHI_001]
gi|374667841|gb|EHR72626.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Burkholderiales bacterium JOSHI_001]
Length = 234
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 2/119 (1%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+L +DDD+ L +LR ++++T+ A +L + R +FD VI DV +P+MDG
Sbjct: 3 RILLIDDDEELAAPLAAYLR--RFDITLEAAARPSLGLARLAAEDFDAVILDVMLPEMDG 60
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK 143
F++ + D+PV+ML+A D + G+ GA DYL KP EL Q ++RR+
Sbjct: 61 FEVCRRIRHGSDIPVLMLTARGDVTDRVVGLELGADDYLPKPFEPRELAARLQTILRRR 119
>gi|357013339|ref|ZP_09078338.1| winged helix family two component transcriptional regulator
[Paenibacillus elgii B69]
Length = 227
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 74/125 (59%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
M +L V+DD+T LE L++ Q+ + + +A K++ E + F L + D+ +PD
Sbjct: 1 MNILVVEDDKTIASGLEYSLQQDQFSTVLCHDIASAKKVIAEQVDQFALCLFDLSLPDGS 60
Query: 84 GFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK 143
G++L ++V D+PV+ L+A D V+ G++ GA DY+ KP R+ EL + + V+RR
Sbjct: 61 GYELCKMVKERSDVPVIFLTAVDDEVNVVMGLDMGADDYITKPFRIRELLSRIKSVLRRY 120
Query: 144 KVDPK 148
+ P+
Sbjct: 121 QKQPQ 125
>gi|375149572|ref|YP_005012013.1| two component transcriptional regulator, winged helix family
[Niastella koreensis GR20-10]
gi|361063618|gb|AEW02610.1| two component transcriptional regulator, winged helix family
[Niastella koreensis GR20-10]
Length = 229
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
M++L V+D+ +L K L+E YEVTV + +M +N FD+++ D+ +P ++
Sbjct: 1 MKILLVEDEAALASMLNKGLKEAGYEVTVAPDGLIGHEM--AIKNQFDVMVLDIMLPGLN 58
Query: 84 GFKLLELVGLE-MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
G +L + + + +D P++ML+A T+ ++ G++ GA DYL+KP EL+ + +IRR
Sbjct: 59 GIQLCKQIRRQQIDTPILMLTALGTTENIVAGLDSGADDYLVKPFHFAELEARLRTLIRR 118
Query: 143 K 143
K
Sbjct: 119 K 119
>gi|294675080|ref|YP_003575696.1| sensor histidine kinase/DNA-binding response regulator [Prevotella
ruminicola 23]
gi|294473361|gb|ADE82750.1| sensor histidine kinase/DNA-binding response regulator [Prevotella
ruminicola 23]
Length = 1284
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 67/112 (59%), Gaps = 5/112 (4%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKML-RENRNNFDLVISDVYMPDMD 83
+VL VDDD+ + + + L C Y +T AL++L E+ FDLV+SDV MP+MD
Sbjct: 1026 QVLIVDDDEEIGRYIAQEL-GCYYHITPVTSGREALRLLLSESEKQFDLVVSDVMMPEMD 1084
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEEL 132
GF LL ++ M+L PVVML++ + ++G+ GA +L KP M+EL
Sbjct: 1085 GFTLLRMIKTNMNLNHIPVVMLTSKAAVANRLEGLEKGADAFLAKPFDMDEL 1136
>gi|26250776|ref|NP_756816.1| transcriptional regulatory protein ZraR [Escherichia coli CFT073]
gi|110644339|ref|YP_672069.1| transcriptional regulatory protein ZraR [Escherichia coli 536]
gi|191174305|ref|ZP_03035813.1| response regulator ZraR [Escherichia coli F11]
gi|300985437|ref|ZP_07177440.1| response regulator receiver domain protein [Escherichia coli MS
200-1]
gi|306812019|ref|ZP_07446227.1| transcriptional regulatory protein ZraR [Escherichia coli NC101]
gi|386631972|ref|YP_006151692.1| transcriptional regulatory protein ZraR [Escherichia coli str.
'clone D i2']
gi|386636892|ref|YP_006156611.1| transcriptional regulatory protein ZraR [Escherichia coli str.
'clone D i14']
gi|419915863|ref|ZP_14434196.1| transcriptional regulatory protein ZraR [Escherichia coli KD1]
gi|422373381|ref|ZP_16453693.1| response regulator receiver domain protein [Escherichia coli MS
60-1]
gi|432383916|ref|ZP_19626838.1| transcriptional regulatory protein zraR [Escherichia coli KTE15]
gi|432384931|ref|ZP_19627837.1| transcriptional regulatory protein zraR [Escherichia coli KTE16]
gi|432429762|ref|ZP_19672215.1| transcriptional regulatory protein zraR [Escherichia coli KTE187]
gi|432438981|ref|ZP_19681354.1| transcriptional regulatory protein zraR [Escherichia coli KTE188]
gi|432454252|ref|ZP_19696469.1| transcriptional regulatory protein zraR [Escherichia coli KTE201]
gi|432468410|ref|ZP_19710483.1| transcriptional regulatory protein zraR [Escherichia coli KTE205]
gi|432473370|ref|ZP_19715404.1| transcriptional regulatory protein zraR [Escherichia coli KTE206]
gi|432506914|ref|ZP_19748629.1| transcriptional regulatory protein zraR [Escherichia coli KTE220]
gi|432516408|ref|ZP_19753620.1| transcriptional regulatory protein zraR [Escherichia coli KTE224]
gi|432526496|ref|ZP_19763605.1| transcriptional regulatory protein zraR [Escherichia coli KTE230]
gi|432571297|ref|ZP_19807798.1| transcriptional regulatory protein zraR [Escherichia coli KTE53]
gi|432585601|ref|ZP_19821988.1| transcriptional regulatory protein zraR [Escherichia coli KTE57]
gi|432595276|ref|ZP_19831582.1| transcriptional regulatory protein zraR [Escherichia coli KTE60]
gi|432605460|ref|ZP_19841666.1| transcriptional regulatory protein zraR [Escherichia coli KTE67]
gi|432614022|ref|ZP_19850176.1| transcriptional regulatory protein zraR [Escherichia coli KTE72]
gi|432648690|ref|ZP_19884472.1| transcriptional regulatory protein zraR [Escherichia coli KTE86]
gi|432653677|ref|ZP_19889412.1| transcriptional regulatory protein zraR [Escherichia coli KTE87]
gi|432658255|ref|ZP_19893949.1| transcriptional regulatory protein zraR [Escherichia coli KTE93]
gi|432701534|ref|ZP_19936675.1| transcriptional regulatory protein zraR [Escherichia coli KTE169]
gi|432715876|ref|ZP_19950898.1| transcriptional regulatory protein zraR [Escherichia coli KTE8]
gi|432747993|ref|ZP_19982652.1| transcriptional regulatory protein zraR [Escherichia coli KTE43]
gi|432781343|ref|ZP_20015551.1| transcriptional regulatory protein zraR [Escherichia coli KTE63]
gi|432799926|ref|ZP_20033925.1| transcriptional regulatory protein zraR [Escherichia coli KTE84]
gi|432847375|ref|ZP_20079795.1| transcriptional regulatory protein zraR [Escherichia coli KTE141]
gi|432907912|ref|ZP_20116223.1| transcriptional regulatory protein zraR [Escherichia coli KTE194]
gi|432940918|ref|ZP_20138737.1| transcriptional regulatory protein zraR [Escherichia coli KTE183]
gi|432969599|ref|ZP_20158500.1| transcriptional regulatory protein zraR [Escherichia coli KTE207]
gi|432976245|ref|ZP_20165075.1| transcriptional regulatory protein zraR [Escherichia coli KTE209]
gi|432987866|ref|ZP_20176574.1| transcriptional regulatory protein zraR [Escherichia coli KTE215]
gi|432993226|ref|ZP_20181854.1| transcriptional regulatory protein zraR [Escherichia coli KTE218]
gi|432997685|ref|ZP_20186262.1| transcriptional regulatory protein zraR [Escherichia coli KTE223]
gi|433041038|ref|ZP_20228619.1| transcriptional regulatory protein zraR [Escherichia coli KTE113]
gi|433060551|ref|ZP_20247575.1| transcriptional regulatory protein zraR [Escherichia coli KTE124]
gi|433075359|ref|ZP_20261987.1| transcriptional regulatory protein zraR [Escherichia coli KTE129]
gi|433080233|ref|ZP_20266743.1| transcriptional regulatory protein zraR [Escherichia coli KTE131]
gi|433084950|ref|ZP_20271389.1| transcriptional regulatory protein zraR [Escherichia coli KTE133]
gi|433089755|ref|ZP_20276106.1| transcriptional regulatory protein zraR [Escherichia coli KTE137]
gi|433103623|ref|ZP_20289685.1| transcriptional regulatory protein zraR [Escherichia coli KTE145]
gi|433117959|ref|ZP_20303731.1| transcriptional regulatory protein zraR [Escherichia coli KTE153]
gi|433122688|ref|ZP_20308337.1| transcriptional regulatory protein zraR [Escherichia coli KTE157]
gi|433127661|ref|ZP_20313194.1| transcriptional regulatory protein zraR [Escherichia coli KTE160]
gi|433141734|ref|ZP_20326964.1| transcriptional regulatory protein zraR [Escherichia coli KTE167]
gi|433146660|ref|ZP_20331784.1| transcriptional regulatory protein zraR [Escherichia coli KTE168]
gi|433151685|ref|ZP_20336675.1| transcriptional regulatory protein zraR [Escherichia coli KTE174]
gi|433185816|ref|ZP_20370043.1| transcriptional regulatory protein zraR [Escherichia coli KTE85]
gi|433190829|ref|ZP_20374909.1| transcriptional regulatory protein zraR [Escherichia coli KTE88]
gi|433210222|ref|ZP_20393877.1| transcriptional regulatory protein zraR [Escherichia coli KTE97]
gi|433215059|ref|ZP_20398625.1| transcriptional regulatory protein zraR [Escherichia coli KTE99]
gi|442607398|ref|ZP_21022169.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli Nissle 1917]
gi|26111207|gb|AAN83390.1|AE016770_190 Transcriptional Regulatory protein zraR [Escherichia coli CFT073]
gi|110345931|gb|ABG72168.1| transcriptional regulatory protein ZraR [Escherichia coli 536]
gi|190905437|gb|EDV65068.1| response regulator ZraR [Escherichia coli F11]
gi|300306529|gb|EFJ61049.1| response regulator receiver domain protein [Escherichia coli MS
200-1]
gi|305854624|gb|EFM55060.1| transcriptional regulatory protein ZraR [Escherichia coli NC101]
gi|324015258|gb|EGB84477.1| response regulator receiver domain protein [Escherichia coli MS
60-1]
gi|355422871|gb|AER87068.1| transcriptional regulatory protein ZraR [Escherichia coli str.
'clone D i2']
gi|355427791|gb|AER91987.1| transcriptional regulatory protein ZraR [Escherichia coli str.
'clone D i14']
gi|388382722|gb|EIL44568.1| transcriptional regulatory protein ZraR [Escherichia coli KD1]
gi|430902723|gb|ELC24570.1| transcriptional regulatory protein zraR [Escherichia coli KTE15]
gi|430911658|gb|ELC32933.1| transcriptional regulatory protein zraR [Escherichia coli KTE16]
gi|430958215|gb|ELC76811.1| transcriptional regulatory protein zraR [Escherichia coli KTE187]
gi|430959319|gb|ELC77649.1| transcriptional regulatory protein zraR [Escherichia coli KTE188]
gi|430987363|gb|ELD03902.1| transcriptional regulatory protein zraR [Escherichia coli KTE201]
gi|430989799|gb|ELD06248.1| transcriptional regulatory protein zraR [Escherichia coli KTE205]
gi|430995123|gb|ELD11431.1| transcriptional regulatory protein zraR [Escherichia coli KTE206]
gi|431034492|gb|ELD46427.1| transcriptional regulatory protein zraR [Escherichia coli KTE220]
gi|431037500|gb|ELD48482.1| transcriptional regulatory protein zraR [Escherichia coli KTE224]
gi|431047011|gb|ELD57101.1| transcriptional regulatory protein zraR [Escherichia coli KTE230]
gi|431096388|gb|ELE01873.1| transcriptional regulatory protein zraR [Escherichia coli KTE53]
gi|431113763|gb|ELE17415.1| transcriptional regulatory protein zraR [Escherichia coli KTE57]
gi|431125088|gb|ELE27519.1| transcriptional regulatory protein zraR [Escherichia coli KTE60]
gi|431143631|gb|ELE45352.1| transcriptional regulatory protein zraR [Escherichia coli KTE67]
gi|431145742|gb|ELE47352.1| transcriptional regulatory protein zraR [Escherichia coli KTE72]
gi|431177248|gb|ELE77182.1| transcriptional regulatory protein zraR [Escherichia coli KTE86]
gi|431186312|gb|ELE85874.1| transcriptional regulatory protein zraR [Escherichia coli KTE87]
gi|431187081|gb|ELE86601.1| transcriptional regulatory protein zraR [Escherichia coli KTE93]
gi|431239304|gb|ELF33945.1| transcriptional regulatory protein zraR [Escherichia coli KTE169]
gi|431250988|gb|ELF45045.1| transcriptional regulatory protein zraR [Escherichia coli KTE8]
gi|431288988|gb|ELF79741.1| transcriptional regulatory protein zraR [Escherichia coli KTE43]
gi|431333900|gb|ELG21083.1| transcriptional regulatory protein zraR [Escherichia coli KTE63]
gi|431353282|gb|ELG40036.1| transcriptional regulatory protein zraR [Escherichia coli KTE84]
gi|431391735|gb|ELG75345.1| transcriptional regulatory protein zraR [Escherichia coli KTE141]
gi|431425842|gb|ELH07889.1| transcriptional regulatory protein zraR [Escherichia coli KTE194]
gi|431459264|gb|ELH39578.1| transcriptional regulatory protein zraR [Escherichia coli KTE183]
gi|431484817|gb|ELH64489.1| transcriptional regulatory protein zraR [Escherichia coli KTE209]
gi|431489614|gb|ELH69240.1| transcriptional regulatory protein zraR [Escherichia coli KTE207]
gi|431492865|gb|ELH72463.1| transcriptional regulatory protein zraR [Escherichia coli KTE215]
gi|431513233|gb|ELH91317.1| transcriptional regulatory protein zraR [Escherichia coli KTE218]
gi|431520087|gb|ELH97515.1| transcriptional regulatory protein zraR [Escherichia coli KTE223]
gi|431547462|gb|ELI21841.1| transcriptional regulatory protein zraR [Escherichia coli KTE113]
gi|431564913|gb|ELI38059.1| transcriptional regulatory protein zraR [Escherichia coli KTE124]
gi|431581469|gb|ELI53918.1| transcriptional regulatory protein zraR [Escherichia coli KTE129]
gi|431592469|gb|ELI63046.1| transcriptional regulatory protein zraR [Escherichia coli KTE131]
gi|431597023|gb|ELI66948.1| transcriptional regulatory protein zraR [Escherichia coli KTE133]
gi|431599731|gb|ELI69435.1| transcriptional regulatory protein zraR [Escherichia coli KTE137]
gi|431614733|gb|ELI83870.1| transcriptional regulatory protein zraR [Escherichia coli KTE145]
gi|431629587|gb|ELI97948.1| transcriptional regulatory protein zraR [Escherichia coli KTE153]
gi|431638036|gb|ELJ06084.1| transcriptional regulatory protein zraR [Escherichia coli KTE157]
gi|431639201|gb|ELJ07068.1| transcriptional regulatory protein zraR [Escherichia coli KTE160]
gi|431654419|gb|ELJ21475.1| transcriptional regulatory protein zraR [Escherichia coli KTE167]
gi|431656557|gb|ELJ23538.1| transcriptional regulatory protein zraR [Escherichia coli KTE168]
gi|431666424|gb|ELJ33062.1| transcriptional regulatory protein zraR [Escherichia coli KTE174]
gi|431700783|gb|ELJ65713.1| transcriptional regulatory protein zraR [Escherichia coli KTE85]
gi|431700918|gb|ELJ65844.1| transcriptional regulatory protein zraR [Escherichia coli KTE88]
gi|431727659|gb|ELJ91406.1| transcriptional regulatory protein zraR [Escherichia coli KTE97]
gi|431730735|gb|ELJ94295.1| transcriptional regulatory protein zraR [Escherichia coli KTE99]
gi|441711351|emb|CCQ08146.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli Nissle 1917]
Length = 441
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|222158710|ref|YP_002558849.1| Transcriptional regulatory protein zraR [Escherichia coli LF82]
gi|331660565|ref|ZP_08361498.1| transcriptional regulatory protein ZraR [Escherichia coli TA206]
gi|387619317|ref|YP_006122339.1| transcriptional regulatory protein ZraR [Escherichia coli O83:H1
str. NRG 857C]
gi|432443620|ref|ZP_19685941.1| transcriptional regulatory protein zraR [Escherichia coli KTE189]
gi|432448694|ref|ZP_19690988.1| transcriptional regulatory protein zraR [Escherichia coli KTE191]
gi|433016352|ref|ZP_20204671.1| transcriptional regulatory protein zraR [Escherichia coli KTE104]
gi|433025934|ref|ZP_20213894.1| transcriptional regulatory protein zraR [Escherichia coli KTE106]
gi|433326309|ref|ZP_20403194.1| transcriptional regulatory protein ZraR [Escherichia coli J96]
gi|222035715|emb|CAP78460.1| Transcriptional regulatory protein zraR [Escherichia coli LF82]
gi|312948578|gb|ADR29405.1| transcriptional regulatory protein ZraR [Escherichia coli O83:H1
str. NRG 857C]
gi|331052348|gb|EGI24386.1| transcriptional regulatory protein ZraR [Escherichia coli TA206]
gi|430960218|gb|ELC78374.1| transcriptional regulatory protein zraR [Escherichia coli KTE189]
gi|430970379|gb|ELC87451.1| transcriptional regulatory protein zraR [Escherichia coli KTE191]
gi|431525493|gb|ELI02284.1| transcriptional regulatory protein zraR [Escherichia coli KTE104]
gi|431529524|gb|ELI06224.1| transcriptional regulatory protein zraR [Escherichia coli KTE106]
gi|432345615|gb|ELL40116.1| transcriptional regulatory protein ZraR [Escherichia coli J96]
Length = 441
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|157429040|gb|ABB99942.2| hypothetical protein pCT0024 [Listeria monocytogenes]
Length = 226
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 73/120 (60%), Gaps = 4/120 (3%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAIT-ALKMLRENRNNFDLVISDVYMPDM 82
M++L VDD++ L+I++ +L Y V +AI+ A+ + + +NN DLV+ D+ +PD
Sbjct: 1 MKILIVDDEEKILEIIDAYLVANHYSVY---KAISGAMALEKFEKNNPDLVVLDLMLPDT 57
Query: 83 DGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
DG + + ++P++ML+A SD ++ G+ GA DY+LKP +EL Q V+RR
Sbjct: 58 DGLTVCRKIREISNVPIIMLTAKSDEDDILTGLKLGADDYMLKPFSPKELVARIQTVLRR 117
>gi|379058990|ref|ZP_09849516.1| two component transcriptional regulator, winged helix family
protein [Serinicoccus profundi MCCC 1A05965]
Length = 225
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
RVL VDDDQ ++L LR+ YEV A+ M RE R DLV+ DV +P DG
Sbjct: 4 RVLVVDDDQALAEMLGIVLRKEGYEVATCADGGRAMPMFREFRP--DLVLLDVMLPSKDG 61
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEE 131
++ + E +PVVML+A +DTK V+ G+ GA DY++KP + +E
Sbjct: 62 IEVCRELRGESGVPVVMLTARTDTKDVVLGLEAGADDYVVKPFKPQE 108
>gi|313115387|ref|ZP_07800858.1| response regulator receiver domain protein [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310622301|gb|EFQ05785.1| response regulator receiver domain protein [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 233
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 71/117 (60%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
VL +DDD+ +++K + + V + + L++L +N++ L+I DV MPDM+GF
Sbjct: 4 VLIIDDDKKLCALMKKCVEQENLSAVVAHGGLEGLRLLEKNKDTCSLIILDVMMPDMNGF 63
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
++L+ + + ++PV+ML+A SD + + G+ GA DYL KP + EL +IRR
Sbjct: 64 QVLQKIREKNNVPVLMLTAKSDEEDKVSGLRLGADDYLTKPFGINELMARVNSLIRR 120
>gi|300864253|ref|ZP_07109133.1| putative adenylate/guanylate cyclase [Oscillatoria sp. PCC 6506]
gi|300337718|emb|CBN54279.1| putative adenylate/guanylate cyclase [Oscillatoria sp. PCC 6506]
Length = 1140
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 4/137 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+++L VDD+ +++L L +YEVT AL+++ EN DL++ DV MP M
Sbjct: 729 LKILIVDDEPVNIQVLINNLSVLKYEVTQATNGFEALEII-ENGFRPDLILLDVMMPRMS 787
Query: 84 GFKLLELVGLE---MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G+++ +++ + ++LP+VML+A + +++G N GA DYL KP EL + I
Sbjct: 788 GYEVCQILREKFPAIELPIVMLTAKNQVTDLVEGFNSGANDYLSKPFSKNELLARIKTHI 847
Query: 141 RRKKVDPKDQNRSPHEF 157
R K++ PHEF
Sbjct: 848 RLAKINAAYGRFVPHEF 864
>gi|455644043|gb|EMF23157.1| transcriptional regulatory protein ZraR [Citrobacter freundii GTC
09479]
Length = 441
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR YEV + AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYEVALAYSGRAALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++A+S + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAFSSVETAVEALKTGALDYLIKPLDFDRLQETLEKAL 121
>gi|449513573|ref|XP_004164360.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR2-like [Cucumis sativus]
Length = 559
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 188 TQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHL-QKFRLSL 246
++KK +V WT ELH KF+ AV LG+++A+P +IL+LM VEGLTR NVASHL QK+R+
Sbjct: 311 SRKKLKVDWTPELHRKFVQAVEQLGVNQAIPSRILELMKVEGLTRHNVASHLQQKYRMHK 370
Query: 247 KRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHS 283
+ + K + S +Y + F HS
Sbjct: 371 RHILPKEEDGSWSHSKDPMRKNYYPQRPVMAFPPYHS 407
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL +D D + ++ L E +Y V AL + F + I +V
Sbjct: 14 FPKGLRVLLLDGDTSSAAEIKTKLEEMEYVVVTYCNENDALSAISSKPETFHVAIVEVTT 73
Query: 80 PDMDG-FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQH 138
+ +G FK LE DLP +M+S +MK I GA ++L KP+ ++L+N WQH
Sbjct: 74 SNHEGNFKFLEAAK---DLPTIMISNIHCLSTMMKCIALGAMEFLQKPLSDDKLRNIWQH 130
Query: 139 VIRR 142
V+ +
Sbjct: 131 VVHK 134
>gi|325298951|ref|YP_004258868.1| response regulator receiver modulated serine phosphatase
[Bacteroides salanitronis DSM 18170]
gi|324318504|gb|ADY36395.1| response regulator receiver modulated serine phosphatase
[Bacteroides salanitronis DSM 18170]
Length = 388
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 81/137 (59%), Gaps = 9/137 (6%)
Query: 22 IGMRVLAVDDDQTCLKILEKF----LRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
+ +++L+VDD+Q +L ++ +R+ +YE T + + AL+++ E ++ FD+++SD+
Sbjct: 1 MAIKILSVDDEQDLEILLTQYFRRKIRKGEYEFTFAHNGLEALQLVLEKKD-FDIILSDI 59
Query: 78 YMPDMDGFKLLELVGLEMDLP---VVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKN 134
MP+MDG LL + EM P +M+SAY D + +N+GA D+ KP+ +++L
Sbjct: 60 NMPEMDGLTLLTRIN-EMRNPALKCIMVSAYGDMDNIRSAMNNGAFDFATKPIDLDDLSR 118
Query: 135 TWQHVIRRKKVDPKDQN 151
T + I + + QN
Sbjct: 119 TIEKAIEQINFVRESQN 135
>gi|422362895|ref|ZP_16443445.1| response regulator receiver domain protein, partial [Escherichia
coli MS 153-1]
gi|315294338|gb|EFU53689.1| response regulator receiver domain protein [Escherichia coli MS
153-1]
Length = 420
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|318041885|ref|ZP_07973841.1| two-component response regulator [Synechococcus sp. CB0101]
Length = 254
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
P G+++L DD+ +ILE L +EV + + AL++ R + DLV+ DV MP
Sbjct: 10 PEGLKILVADDEANIRRILETRLTMQGHEVLMASNGAEALELFRGSEP--DLVVLDVMMP 67
Query: 81 DMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
++DGF ++E + + ++P+++L+A D + G+ GA DY++KP +EL+ + V+
Sbjct: 68 ELDGFAVVERIRAQSEVPIILLTALGDVADRITGLQLGADDYMVKPFSPKELEARIRCVM 127
Query: 141 RR 142
RR
Sbjct: 128 RR 129
>gi|433200792|ref|ZP_20384667.1| transcriptional regulatory protein zraR [Escherichia coli KTE94]
gi|431716003|gb|ELJ80145.1| transcriptional regulatory protein zraR [Escherichia coli KTE94]
Length = 441
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|309386157|gb|ADO67022.1| response regulator [Enterococcus faecium]
Length = 228
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 4/122 (3%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAIT-ALKMLRENRNNFDLVISDVYMP 80
+ M++L VDD++ L+I++ +L Y V +AI+ A+ + + +NN DLV+ D+ +P
Sbjct: 1 MSMKILIVDDEEKILEIIDAYLVANHYSVY---KAISGAMALEKFEKNNPDLVVLDLMLP 57
Query: 81 DMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
D DG + + ++P++ML+A SD ++ G+ GA DY++KP +EL Q V+
Sbjct: 58 DTDGLTVCRKIREVSNVPIIMLTAKSDEDDILTGLKLGADDYMIKPFSPKELVARIQTVL 117
Query: 141 RR 142
RR
Sbjct: 118 RR 119
>gi|328952038|ref|YP_004369372.1| response regulator receiver protein [Desulfobacca acetoxidans DSM
11109]
gi|328452362|gb|AEB08191.1| response regulator receiver protein [Desulfobacca acetoxidans DSM
11109]
Length = 135
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 25 RVLAVDDDQTCLKILEKFLR-ECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
R+L VDD+ L++L+ + + YEV TN + K+L+E FDL+I+D+ MP +D
Sbjct: 4 RILVVDDEPNMLRLLKAIITGKTSYEVVTTNNPLEVSKLLQEEL--FDLLITDLKMPLLD 61
Query: 84 GFKLLELVG-LEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
G L++ V ++ LP++M++AY + + I GA DY+ KP R E + T + +
Sbjct: 62 GMDLIDTVKKMDPTLPIIMITAYGTIETAEEAIQKGAYDYITKPFRQEAILITLKRALEW 121
Query: 143 KKV 145
+K+
Sbjct: 122 RKM 124
>gi|218692285|ref|YP_002400497.1| transcriptional regulatory protein ZraR [Escherichia coli ED1a]
gi|218429849|emb|CAR10817.2| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein [Escherichia coli ED1a]
Length = 441
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|300979679|ref|ZP_07174651.1| response regulator receiver domain protein, partial [Escherichia
coli MS 45-1]
gi|300409463|gb|EFJ93001.1| response regulator receiver domain protein [Escherichia coli MS
45-1]
Length = 384
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKTLNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>gi|428223345|ref|YP_007107515.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Synechococcus sp. PCC 7502]
gi|427996685|gb|AFY75380.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Synechococcus sp. PCC 7502]
Length = 242
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++L VDD+ + +ILE L YEV A+ M R+ DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYEVVTAGDGEEAIAMFRDEIP--DLVVLDVMMPKLDG 64
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
+ + + + E D+P++ML+A SD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALSDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|383761041|ref|YP_005440023.1| putative OmpR family two-component response regulator [Caldilinea
aerophila DSM 14535 = NBRC 104270]
gi|381381309|dbj|BAL98125.1| putative OmpR family two-component response regulator [Caldilinea
aerophila DSM 14535 = NBRC 104270]
Length = 239
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 77/125 (61%), Gaps = 2/125 (1%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++L V+D+ + ++ LE LR+ YEV N AL+ R+++ DL+I D+ +P +DG
Sbjct: 5 KILVVEDEISLVETLEYSLRKQGYEVITANTGPRALEQARQHQP--DLIILDIMLPGLDG 62
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
F++ ++ EM+ P++ML+A ++ + G+ GA DYL KP M EL + ++RR +
Sbjct: 63 FEICRILRKEMNAPIIMLTARTEEVDRVVGLEMGADDYLTKPFSMRELLARVKAMLRRVR 122
Query: 145 VDPKD 149
+D ++
Sbjct: 123 IDREE 127
>gi|363807950|ref|NP_001241943.1| uncharacterized protein LOC100799248 [Glycine max]
gi|255638900|gb|ACU19752.1| unknown [Glycine max]
Length = 426
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%)
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
++K +V WT ELH +F+ AV LG+DKAVP +IL++M ++ LTR N+ASHLQK+R K
Sbjct: 173 KRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKH 232
Query: 249 LGNKTLEAG 257
L + EA
Sbjct: 233 LLAREAEAA 241
>gi|237721198|ref|ZP_04551679.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|383122178|ref|ZP_09942875.1| hypothetical protein BSIG_3377 [Bacteroides sp. 1_1_6]
gi|229450033|gb|EEO55824.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|251839903|gb|EES67986.1| hypothetical protein BSIG_3377 [Bacteroides sp. 1_1_6]
Length = 435
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+L V+D+ +K L + YE +T A K+L+ + +FDLV+SDV +P+ DG
Sbjct: 4 RILIVEDNIMLAGQQKKRLEKSGYEAEITIDEPGARKLLK--KESFDLVLSDVRLPEGDG 61
Query: 85 FKLLELVGLE-MDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK 143
LLE + E MD+P ++++ Y+ ++ I GA DYL KPV+M+EL+ + + R K
Sbjct: 62 ISLLEWMRKERMDIPFIIMTGYASVPDAVQAIKLGAKDYLAKPVQMDELQRQLKDIFRPK 121
Query: 144 KV 145
V
Sbjct: 122 SV 123
>gi|167950819|ref|ZP_02537893.1| nitrogen regulation protein NR(I) [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 337
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
RV +DDD++ +LEK L++ Q EV A L L R D+++SD+ MP MDG
Sbjct: 6 RVWVIDDDRSIRWVLEKTLQKAQMEVVCFESANGVLDSL--ERQQPDVIVSDIRMPGMDG 63
Query: 85 FKLLELVGLEM-DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK 143
+LLE + L +LPV++++A+SD + + + GA +YL KP ++E + + R+
Sbjct: 64 LELLERINLRFPELPVIIMTAHSDLESAVSAFHGGAFEYLPKPFDVDEAVDQIRRACRQT 123
Query: 144 KVDPKDQ 150
+ K Q
Sbjct: 124 QSQTKRQ 130
>gi|126650201|ref|ZP_01722429.1| hypothetical protein BB14905_17645 [Bacillus sp. B14905]
gi|126592851|gb|EAZ86833.1| hypothetical protein BB14905_17645 [Bacillus sp. B14905]
Length = 1021
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
R+L VDD+ L+++E L QY++ + AL ++ + +DLVISDV MP M G
Sbjct: 689 RILVVDDEPINLRVVETILANEQYDIVTVTSGLDALVSIQSH--EWDLVISDVMMPKMSG 746
Query: 85 FKLLELVGLEM---DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIR 141
++L+ L+ + DLP+++L+A S + + KG GA DY+ KPV EL++ +I+
Sbjct: 747 YELVRLIRKQFSITDLPILLLTARSQPQNLEKGFLAGANDYVTKPVDALELRSRVAALIK 806
Query: 142 RKK 144
K+
Sbjct: 807 VKR 809
>gi|374296383|ref|YP_005046574.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Clostridium clariflavum DSM 19732]
gi|359825877|gb|AEV68650.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Clostridium clariflavum DSM 19732]
Length = 231
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 77/132 (58%), Gaps = 2/132 (1%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
M++L V+DD+ LE L + + + A +A K++ EN + FDL + D+ +PD
Sbjct: 1 MKILLVEDDKVIAAGLEYSLEQENFTTVLCYDAESARKVISENLSQFDLCLFDLALPDGS 60
Query: 84 GFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR- 142
G+ L LV D+PV+ L+A D ++ G++ GA DY+ KP R+ EL + + V+RR
Sbjct: 61 GYDLCRLVKKMQDIPVIFLTAVDDEGNIVMGLDMGADDYITKPFRIRELISRIKSVLRRY 120
Query: 143 -KKVDPKDQNRS 153
K+ + + +N++
Sbjct: 121 NKQQEKQKENKA 132
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.129 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,054,468,333
Number of Sequences: 23463169
Number of extensions: 335526036
Number of successful extensions: 1757054
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 22922
Number of HSP's successfully gapped in prelim test: 79191
Number of HSP's that attempted gapping in prelim test: 1638465
Number of HSP's gapped (non-prelim): 114572
length of query: 529
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 382
effective length of database: 8,910,109,524
effective search space: 3403661838168
effective search space used: 3403661838168
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 79 (35.0 bits)