BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009670
(529 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 347 bits (889), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 225/510 (44%), Positives = 296/510 (58%), Gaps = 58/510 (11%)
Query: 11 SDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNF 70
S EDG DKFP+GMRVLAVDD+ TCL+ LE+ L C+Y VT T + AL+MLREN N F
Sbjct: 5 STEDGRHDKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMF 64
Query: 71 DLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRME 130
DLVISDV MPD DGFKLLE +GLEMDLPV+MLSA+SD VMKGI HGACDYL+KPV ++
Sbjct: 65 DLVISDVEMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLK 123
Query: 131 ELKNTWQHVIRR------KKVDPKDQNRSPHEFEKSYRKRKDQ----------------- 167
EL+N W HV+++ K + P + + P + RKRKD+
Sbjct: 124 ELQNIWHHVVKKNIKSYAKLLPPSESDSVP----SASRKRKDKVNDSGDEDDSDREEDDG 179
Query: 168 DGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNV 227
+G ++D DG S T+KKPRVVW+ ELH KF+ AV LGLDKAVPKKILDLM++
Sbjct: 180 EGSEQDGDG---------SGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSI 230
Query: 228 EGLTRENVASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDG---FGGSHSV 284
EGLTRENVASHLQK+RL LK++ + + G++DSSY ++ LDG F + +
Sbjct: 231 EGLTRENVASHLQKYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQLDGLRDFTAARQI 290
Query: 285 NSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQ 344
S G LS S L+ P M +N + G+ SS I+ G Q+ + S N G
Sbjct: 291 PSSGLLSRSHLTKLQPP--MYSSIN------LQGMNSSSFIQQGHHQNSSNSANPFGTYH 342
Query: 345 QAMFPANRNSNLVQGVQTSLEPNQMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAVG 404
+ P +N NL Q + LEP Q P+S+S +IGDF + F+D + G
Sbjct: 343 STLSPRIQNVNLFQRTSSPLEPLQFPRSKS--YIGDFKGLGD---RAIGGSFLDTCMPFG 397
Query: 405 SSSSSVSTSLSNLMMLQANPHQAQSRDAYGNQSSLTVASLNQAYFDLGVHDSSNFLDHGR 464
SSS+S+ ++ +N +MLQAN Q + G Q + N A ++ S F H
Sbjct: 398 SSSTSLPSASTNPLMLQANYTQPLHIASDGIQPCIEGTPSNSASPNISFQGLSRFPGH-- 455
Query: 465 CQESWQDAVQLSKSSSISLPLGEPFILDQV 494
SWQ + ++ SLPL F+ DQV
Sbjct: 456 ---SWQGNLNTTRFPPSSLPLNLAFLPDQV 482
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 334 bits (857), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 195/380 (51%), Positives = 247/380 (65%), Gaps = 46/380 (12%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
+D+FP+GMRVLAVDDDQTCLKILE LR CQY VT TN+A AL++LREN+N FDLVIS
Sbjct: 9 ALDQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVIS 68
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV MPDMDGFKLLELVGLEMDLPV+MLSA+SD K VMKG+ HGACDYLLKPVR+EELKN
Sbjct: 69 DVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNI 128
Query: 136 WQHVIRRK--------------------KVDPKDQNRSPHEFEKSYRKRKDQDGEDEDED 175
WQHV+R + V DQN K RKRKDQ +ED
Sbjct: 129 WQHVVRSRFDKNRGSNNNGDKRDGSGNEGVGNSDQNNG-----KGNRKRKDQ----YNED 179
Query: 176 GDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENV 235
D+D +N++S QKK RVVWT ELH KF+ AVN LG +KA+PKKILDLMNVE LTRENV
Sbjct: 180 EDEDRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENV 239
Query: 236 ASHLQKFRLSLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSAL 295
ASHLQKFRL LKR+ + ++A + + ++++ LDGF G+ A
Sbjct: 240 ASHLQKFRLYLKRISGVANQQAIMA---NSELHFMQMNGLDGFHHRPIPVGSGQYHGGAP 296
Query: 296 S-SSYVPGSMIGRLNSSAGLSMHGIAS--SGMIKPGLSQSFNTSFNTIGK-NQQAMFPAN 351
+ S+ P ++GRLN+ +G+ + ++S +GM F + IGK + + P N
Sbjct: 297 AMRSFPPNGILGRLNTPSGIGVRSLSSPPAGM--------FLQNQTDIGKFHHVSSLPLN 348
Query: 352 RN--SNLVQGVQTSLEPNQM 369
+ N++QG+ LE +Q+
Sbjct: 349 HSDGGNILQGLPMPLEFDQL 368
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 200/417 (47%), Positives = 267/417 (64%), Gaps = 62/417 (14%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
V+D+FP+GMRVLAVDDDQTCL+IL+ L+ CQY VT TN+A TAL++LREN+N FDLVIS
Sbjct: 9 VLDQFPVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVIS 68
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV MPDMDGFKLLELVGLEMDLPV+MLSA+SD K VMKG+ HGACDYLLKPVR+EELKN
Sbjct: 69 DVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNI 128
Query: 136 WQHVIRRKKVDPKDQNRS--PHEFEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPR 193
WQHV+R+ K+ N S +K+ RKRK+Q E+E+E + G++N++ T QKKPR
Sbjct: 129 WQHVVRKSKLKKNKSNVSNGSGNCDKANRKRKEQYEEEEEE---ERGNDNDDPTAQKKPR 185
Query: 194 VVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKT 253
V+WT ELH KF+ AV+ LG+++AVPKKILDLMNV+ LTRENVASHLQKFR++LK++ +
Sbjct: 186 VLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRVALKKVSDDA 245
Query: 254 LEAGMVASVGSKDSSYLRIGALDGFGGSH------SVNSPGRLSSSALSSSYVPGSMIGR 307
++ A++ DS ++++ + G GG + V S + + Y +GR
Sbjct: 246 IQQANRAAI---DSHFMQMNSQKGLGGFYHHHRGIPVGSGQFHGGTTMMRHYSSNRNLGR 302
Query: 308 LNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTIGKNQQAMFPANRNSNLVQGVQTSLEPN 367
LNS +GM +P +S SF + N G N++QG
Sbjct: 303 LNS---------LGAGMFQP-VSSSFPRNHNDGG-------------NILQG-------- 331
Query: 368 QMPQSESTTHIGDFNHINSPTAFTAATGFIDARVAVGSSSSSVSTSLSNLMMLQANP 424
+P E + N+IN AF + T S +S + SNL++L+ NP
Sbjct: 332 -LPLEELQIN----NNINR--AFPSFT----------SQQNSPMVAPSNLLLLEGNP 371
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 301 bits (771), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 173/399 (43%), Positives = 238/399 (59%), Gaps = 57/399 (14%)
Query: 16 VIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVIS 75
V++ FP G+RVL VDDD TCL ILE+ LR C YEVT NRA AL +LR+N++ FD+VIS
Sbjct: 29 VVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVIS 88
Query: 76 DVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
DV+MPDMDGFKLLE VGLEMDLPV+M+SA +V+KG+ HGA DYL+KPVRME LKN
Sbjct: 89 DVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNI 148
Query: 136 WQHVIRRKKV-----------------------------------DPKDQNRSP----HE 156
WQHV+R+++ D D N S +
Sbjct: 149 WQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNN 208
Query: 157 FEKSYRKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKA 216
+ S RKRKD++GE++ +D D+D ++ KKPRVVW+ ELH +F+ AVN LG++KA
Sbjct: 209 WRSSSRKRKDEEGEEQGDDKDED------ASNLKKPRVVWSVELHQQFVAAVNQLGVEKA 262
Query: 217 VPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMV--ASVGSKDSSYLRIGA 274
VPKKIL+LMNV GLTRENVASHLQK+R+ L+RLG + G + + + +D+S+ +
Sbjct: 263 VPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLST 322
Query: 275 LDGFGGSHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFN 334
L+GF ++ G+L + +L+ G +GR A +S G+ S ++ SF+
Sbjct: 323 LNGF-DLQALAVTGQLPAQSLAQLQAAG--LGR---PAMVSKSGLPVSSIVDERSIFSFD 376
Query: 335 TSFNTIGKN---QQAMFPANRNSNLVQGVQTSLEPNQMP 370
+ G+ NL+ GV T L+ Q+P
Sbjct: 377 NTKTRFGEGLGHHGQQPQQQPQMNLLHGVPTGLQ-QQLP 414
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 301 bits (770), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/403 (45%), Positives = 236/403 (58%), Gaps = 63/403 (15%)
Query: 7 GGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLREN 66
GGS+SD FP +RVL VDDD TCL ILE+ L C Y VT NRA +AL +LR+N
Sbjct: 17 GGSNSD------PFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKN 70
Query: 67 RNNFDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKP 126
+N FD+VISDV+MPDMDGFKLLE VGLEMDLPV+M+SA +V+KG+ HGA DYL+KP
Sbjct: 71 KNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKP 130
Query: 127 VRMEELKNTWQHVIRRKKVDPKDQNRSPH-----EFEKSYRKRKDQDGEDED-------- 173
VR+E LKN WQHV+R+K+ + N S H E R R+ Q ED D
Sbjct: 131 VRIEALKNIWQHVVRKKR---NEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNE 187
Query: 174 -----------EDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKIL 222
E+ DD G + E+S++ KKPRVVW+ ELH +F+ AVN LG+DKAVPKKIL
Sbjct: 188 GNGRSSRKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKIL 247
Query: 223 DLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAGMV--ASVGSKDSSYLRIGALDGFGG 280
++MNV GLTRENVASHLQK+R+ L+RLG + G + + + +D S+ + +L+GF
Sbjct: 248 EMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQSFGPLSSLNGFD- 306
Query: 281 SHSVNSPGRLSSSALSSSYVPGSMIGRLNSSAGLSMHGIASSGMIKPGLSQSFNTSFNTI 340
L S A++ P S+ A L G+ + KPG+S S +I
Sbjct: 307 ---------LQSLAVTGQLPPQSL-------AQLQAAGLGRPTLAKPGMSVSPLVDQRSI 350
Query: 341 --GKNQQAMF-----PANRNSNLVQGVQTS----LEPNQMPQS 372
+N + F N NL+ GV T L P Q QS
Sbjct: 351 FNFENPKIRFGDGHGQTMNNGNLLHGVPTGSHMRLRPGQNVQS 393
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/296 (50%), Positives = 188/296 (63%), Gaps = 29/296 (9%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
P+G+RVL VDDD T LKILEK L++C YEVT A AL++LRE ++ +D+VISDV MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 81 DMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
DMDGFKLLE VGLE+DLPV+M+S +T VMKG+ HGACDYLLKP+RM+ELK WQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 141 RRKKVDPKDQNRSPHEFEKSYRKRKDQ-----DGED-------EDEDGDDDGHENEN--- 185
R+K + +D +E + R D+ GED +D D + ++E+
Sbjct: 128 RKKLQEVRDIEGCGYEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLLQDESDPS 187
Query: 186 STTQKKPRVVWTTELHTKFIGAVNLLGLD-KAVPKKILDLMNVEGLTRENVASHLQKFRL 244
S++ KK RVVW+ ELH KF+ AVN +G D KA PKKILDLMNV LTRENVASHLQK+RL
Sbjct: 188 SSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRL 247
Query: 245 SLKRLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGRLSSSALSSSYV 300
L RL V + DSS + G+ SPGR SSYV
Sbjct: 248 YLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGY------QSPGR-------SSYV 290
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 247 bits (631), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/255 (51%), Positives = 169/255 (66%), Gaps = 24/255 (9%)
Query: 18 DKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDV 77
D+FP G+R+L VDDD +CL ILEK L Y+VT+ ++A AL +LRE +++FDLV+SDV
Sbjct: 5 DQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDV 64
Query: 78 YMPDMDGFKLLELVGL-EMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTW 136
+MP M+G+ LL+ VGL EMDLPV+M+S T VM GINHGACDYL+KP+R EELKN W
Sbjct: 65 HMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIW 124
Query: 137 QHVIRRKKVDPKDQNRSPHEFE--------KSYRKRKDQDGEDEDEDGDDDGHENENSTT 188
QHV+RRK V K+ RS E ++ + E+ + + + S
Sbjct: 125 QHVVRRKCVMKKEL-RSSQALEDNKNSGSLETVVVSVSECSEESLMKCRNKKKKKKRSVD 183
Query: 189 Q--------------KKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTREN 234
+ KK RVVW+ ELH +F+ AVN LG+DKAVPK+IL+LMNV GL+REN
Sbjct: 184 RDDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGLSREN 243
Query: 235 VASHLQKFRLSLKRL 249
VASHLQKFRL LKRL
Sbjct: 244 VASHLQKFRLYLKRL 258
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/270 (39%), Positives = 150/270 (55%), Gaps = 22/270 (8%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
+P G+RVL +DDD + L ++E L +C Y+VT A+ + +N DLVISD +
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
P DG +L+ V + +P V++++ DT VMK + +GA D+LLKPVR+EEL N WQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 140 IRRKKVDPKDQN------------------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGH 181
R++ D K+ N R+ +S E+E DD +
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASL-APLENEVRDDMVN 185
Query: 182 ENENSTTQK---KPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASH 238
N T + K R+ WTT+LH +FI AVN LG DKAVPKKIL +M V+ LTRE VASH
Sbjct: 186 YNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH 245
Query: 239 LQKFRLSLKRLGNKTLEAGMVASVGSKDSS 268
LQK+R+ LK+ T + G S + D +
Sbjct: 246 LQKYRMQLKKSIPTTSKHGATLSSTALDKT 275
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/270 (39%), Positives = 150/270 (55%), Gaps = 22/270 (8%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
+P G+RVL +DDD + L ++E L +C Y+VT A+ + +N DLVISD +
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
P DG +L+ V + +P V++++ DT VMK + +GA D+LLKPVR+EEL N WQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 140 IRRKKVDPKDQN------------------RSPHEFEKSYRKRKDQDGEDEDEDGDDDGH 181
R++ D K+ N R+ +S E+E DD +
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASL-APLENEVRDDMVN 185
Query: 182 ENENSTTQK---KPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASH 238
N T + K R+ WTT+LH +FI AVN LG DKAVPKKIL +M V+ LTRE VASH
Sbjct: 186 YNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH 245
Query: 239 LQKFRLSLKRLGNKTLEAGMVASVGSKDSS 268
LQK+R+ LK+ T + G S + D +
Sbjct: 246 LQKYRMQLKKSIPTTSKHGATLSSTALDKT 275
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 147/240 (61%), Gaps = 24/240 (10%)
Query: 20 FPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYM 79
FP G+RVL D+D + L ILE+ L++ QY+VT+ N A+ LR +RN FDL + V
Sbjct: 38 FPEGLRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNN 97
Query: 80 PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
+ D F+ L +G EMDLP++++S K V K + +GA DYL+KP+R E+L+ ++H+
Sbjct: 98 AEGDIFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHL 157
Query: 140 IRRKKVDPKDQNRS--PHEFEKSYRKRKDQDGED--------------EDEDGDDDGHEN 183
+++ + + RS E EK+ ++ G+ E E ++D H++
Sbjct: 158 VKKMR-----ERRSVVTGEAEKAAGEKSSSVGDSTIRNPNKSKRSSCLEAEVNEEDRHDH 212
Query: 184 EN---STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQ 240
+ +++ KK RVVW ELH F+ AV+ LGL++AVPKKILD+M V+ ++RENVASHLQ
Sbjct: 213 NDRACASSAKKRRVVWDEELHQNFLNAVDFLGLERAVPKKILDVMKVDYISRENVASHLQ 272
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 165/301 (54%), Gaps = 20/301 (6%)
Query: 10 SSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNN 69
+S+ ++ +FP VL VD + T L +++ +++ Y+V++ A AL L ++
Sbjct: 20 TSEITSLLSQFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHE 79
Query: 70 FDLVISDVYMPDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRM 129
++VI D +MP +DG + L+ + ++DLPVV++S + T+ VMK +GACDY++KPV+
Sbjct: 80 INIVIWDFHMPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKE 139
Query: 130 EELKNTWQHVIRRKKV------DPKDQNRSPHEFEKSYRKRKDQDGEDEDE------DGD 177
E + N WQH++R++ + PK + F+ DG D D +G
Sbjct: 140 EVMANIWQHIVRKRLIFKPDVAPPKPRMTWSEVFQPVQSHLVPTDGLDRDHFDSITINGG 199
Query: 178 D--DGHENENSTTQKKPRVVWTTELHTKFIGAVNLL-GLDKAVPKKILDL---MNVEGLT 231
+ E + +KPR+ WT ELH KF+ A+ ++ G++KA PK +++ M +EG+T
Sbjct: 200 NGIQNMEKKQGKKPRKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGIT 259
Query: 232 RENVASHLQKFRLSLK--RLGNKTLEAGMVASVGSKDSSYLRIGALDGFGGSHSVNSPGR 289
R NVASHLQK R++L+ ++ +T G + G+ S ++ S+ +N P
Sbjct: 260 RSNVASHLQKHRINLEENQIPQQTQGNGWATAYGTLAPSLQGSDNVNTTIPSYLMNGPAT 319
Query: 290 L 290
L
Sbjct: 320 L 320
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 135/235 (57%), Gaps = 14/235 (5%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
RVL V D L+ + + Y+VT A+ L +N++ DLVI D +MPD++G
Sbjct: 42 RVLLVGADSN--SSLKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIWDFHMPDING 99
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
L ++G +MDLPVV++S + VM+ I +GACD+L+KPV E + W+HV R++
Sbjct: 100 LDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYRKRM 159
Query: 145 ----VDPKDQNRSPHEFEKSYRKRKDQDGEDEDEDGDDD--GHENENSTTQKKPRVVWTT 198
+D ++ + Y + + + +E+G + H+ E S T KKPR+ WT
Sbjct: 160 SKSGLDKPGESGTVESDPDEYDDLEQDNLYESNEEGSKNTCDHKEEKSPT-KKPRMQWTP 218
Query: 199 ELHTKFIGAVNLLG-LDKAVPKKILDLM----NVEGLTRENVASHLQKFRLSLKR 248
ELH KF AV +G L+KA PK IL M NV+GLTR NVASHLQK+R S K+
Sbjct: 219 ELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVASHLQKYRQSSKK 273
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 140/274 (51%), Gaps = 43/274 (15%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPD 81
+ + V+ VDDD L I+ + L+ +Y V + AL L+ R+N DL+I+D YMP
Sbjct: 14 LKINVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRDNIDLIITDYYMPG 73
Query: 82 MDGFKLLELVGLEM-DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
M+G +L + + E +LPV+++S SDT + ++ GA ++ KP+ +L +Q +
Sbjct: 74 MNGLQLKKQITQEFGNLPVLVMS--SDTNKEEESLSCGAMGFIPKPIHPTDLTKIYQFAL 131
Query: 141 RRKK---------VDPKDQNRS--------PHEFEKSYRKRKD----------------- 166
K+ + KD + S P + + KRK+
Sbjct: 132 SNKRNGKSTLSTEQNHKDADVSVPQQITLVPEQADVLKTKRKNCSFKSDSRTVNSTNGSC 191
Query: 167 --QDGEDEDEDGDDDGHENEN----STTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKK 220
DG ++ +G +++ S KK ++ WT LH F+ A+ +GLDKAVPKK
Sbjct: 192 VSTDGSRKNRKRKPNGGPSDDGESMSQPAKKKKIQWTDSLHDLFLQAIRHIGLDKAVPKK 251
Query: 221 ILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTL 254
IL M+V LTRENVASHLQK+R+ L+R+ + L
Sbjct: 252 ILAFMSVPYLTRENVASHLQKYRIFLRRVAEQGL 285
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 136/280 (48%), Gaps = 62/280 (22%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQY-EVTV--TNRAITALKMLRENRNNFDLVISDVY 78
+ + V+ VDD++ L I + L + +Y E+TV + AL L+ R+N DL+I+D Y
Sbjct: 14 LKINVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYY 73
Query: 79 MPDMDGFKLLELVGLEM-DLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQ 137
MP M+G +L + + E +L V+++S SD + ++ GA ++ KP+ +L +Q
Sbjct: 74 MPGMNGLQLKKQITQEFGNLSVLVMS--SDPNKEEESLSCGAMGFIPKPIAPTDLPKIYQ 131
Query: 138 HVIRRKK---------VDPKDQNRS-PHEF----EKSY---------------------- 161
+ K+ + KD N S P + E++Y
Sbjct: 132 FALTYKRNGKSTLSTEQNQKDANVSVPQQIMLVPEQAYVLKTKKKNCSSKSDTRTVNSTN 191
Query: 162 ------------RKRKDQDGEDEDEDGDDDGHENENSTTQKKPRVVWTTELHTKFIGAVN 209
RKRK + G DDG S KK ++ WT L F+ A+
Sbjct: 192 VSHVSTNGSRKNRKRKPKGGPS------DDGESL--SQPPKKKKIWWTNPLQDLFLQAIQ 243
Query: 210 LLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRL 249
+G DK VPKKIL +MNV LTRENVASHLQK+RL +KR+
Sbjct: 244 HIGYDKVVPKKILAIMNVPYLTRENVASHLQKYRLFVKRV 283
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 81/123 (65%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V+ D + +I+ LR+C Y+V + + A ++L+E +N DL+++++ +P +
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSIS 96
Query: 84 GFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHV 139
GF LL LV +E + +PV+M+S+ K+V+K + GA DYL+KP+R ELKN WQHV
Sbjct: 97 GFALLALV-MEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHV 155
Query: 140 IRR 142
RR
Sbjct: 156 WRR 158
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D + +++ LR+C YEV + A + L + +N+ DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + D+PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 141 RR 142
RR
Sbjct: 201 RR 202
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D + +++ LR+C YEV + A + L + +N+ DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + D+PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 141 RR 142
RR
Sbjct: 201 RR 202
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 82/138 (59%), Gaps = 9/138 (6%)
Query: 14 DGVI--DKF--PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNN 69
DG++ ++F I +RVL V+ D + +I+ LR+C Y V + A +ML+ +
Sbjct: 36 DGLVKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPES 95
Query: 70 FDLVISDVYMPDMDGFKLLELVGLEMDL----PVVMLSAYSDTKLVMKGINHGACDYLLK 125
DL++++V +P + G+ LL L+ +E D+ PV+M+S V K + GA DYL+K
Sbjct: 96 VDLILTEVDLPSISGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVK 154
Query: 126 PVRMEELKNTWQHVIRRK 143
P+R EL+N WQHV RR+
Sbjct: 155 PLRRNELRNLWQHVWRRQ 172
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 7/141 (4%)
Query: 7 GGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLREN 66
SS E ++ + P+ RVL + D + I+ LR+C Y V + + A +L+E
Sbjct: 28 AAGSSRETRMLPRMPV--RVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEK 85
Query: 67 RNNFDLVISDVYMPDMDGFKLLELVGLEMD----LPVVMLSAYSDTKLVMKGINHGACDY 122
N DLV+++V +P M GF LL + +E D +PV+M+S+ +V K + GA D+
Sbjct: 86 SFNIDLVLTEVELPLMSGFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADF 144
Query: 123 LLKPVRMEELKNTWQHVIRRK 143
L+KP+R EL+N WQHV R++
Sbjct: 145 LVKPIRKNELRNLWQHVWRKQ 165
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+RVL V++D I+ LR C YEV + I A K+L + N+ D+V+++V MP +
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 137
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + ++PV+M+S++ LV K ++ GA D+L+KP+R ELK WQHV
Sbjct: 138 GIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 197
Query: 141 RR 142
RR
Sbjct: 198 RR 199
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL VD D + +++ LR C YEV A L + +N+ DLV+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + ++PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 141 RR 142
RR
Sbjct: 182 RR 183
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
++VL VD D + +++ LR C YEV A L + +N+ DLV+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 84 GFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
G LL + + ++PV+M+S+ V K ++ GA D+L+KP+R ELKN WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 141 RR 142
RR
Sbjct: 182 RR 183
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
Query: 20 FPI-GMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVY 78
P+ ++VL V++D + I+ L+ C YEVT + A ++L + ++ DLV+++V
Sbjct: 59 LPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVD 118
Query: 79 MPDMDGFKLLELV---GLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNT 135
MP G LL + ++PV+M+S++ LV K +++GA D+L+KP+R ELKN
Sbjct: 119 MPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNL 178
Query: 136 WQHVIRR 142
WQHV RR
Sbjct: 179 WQHVWRR 185
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 1 MTAEEKGGSSSDEDGVIDKFPIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITAL 60
+ E KGG DG ID+ + R+L D+D T L + L EC Y+VT A +
Sbjct: 3 LNGECKGG-----DGFIDRSRV--RILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVI 55
Query: 61 KMLRENRNNFDLVISDVYMPDMDGFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINH 117
L + D++++++ +P G K+L + + DL PV+M+S + +V+K +
Sbjct: 56 DALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKL 115
Query: 118 GACDYLLKPVRMEELKNTWQHVIRRKKV 145
GA DYL+KP+R EL N W H+ RR+++
Sbjct: 116 GAADYLVKPLRTNELLNLWTHMWRRRRM 143
>sp|Q9C9F6|APRR6_ARATH Putative two-component response regulator-like APRR6 OS=Arabidopsis
thaliana GN=APRR6 PE=3 SV=2
Length = 755
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 46/271 (16%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+ +L +D D + L L++ V + A AL M+ + + L+I+++ MP +D
Sbjct: 13 ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72
Query: 84 GFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK 143
L + L+ D+P+++++ TK + AC L KP+ +++KN WQHV +K
Sbjct: 73 SHSFLNALLLK-DIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVFSKK 131
Query: 144 KVDPKDQN----------RSPHEFE-----------------------------KSYRKR 164
+ K N + ++ E ++++KR
Sbjct: 132 SQELKKINITEDQENVMDKDTYQIEAFRANLKRQRISQASLLGRRPFIDTFSTYETFQKR 191
Query: 165 KDQDGEDEDEDGDDDGHENENSTTQKKPRV-----VWTTELHTKFIGAVNLLGLDKAVPK 219
K E + E EN + K V +W +E H KFI A+++LG + PK
Sbjct: 192 KSI-ANVEWKTTPSYAIEIENKRKEWKKSVGRRKSLWNSERHMKFIAAISILGEEDFRPK 250
Query: 220 KILDLMNVEGLTRENVASHLQKFRLSLKRLG 250
IL++MN LT V SHLQK++ + ++
Sbjct: 251 SILEIMNDPNLTHRQVGSHLQKYKAQIDQIS 281
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 189 QKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKR 248
+KKP+V WT ELH KF+ AV LG+DKAVP +IL++MNV+ LTR NVASHLQK+R K
Sbjct: 145 KKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKH 204
Query: 249 LGNKTLEAG 257
L + EA
Sbjct: 205 LLAREAEAA 213
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%)
Query: 183 NENSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKF 242
+NS ++K +V WT ELH +F+ AV LG+DKAVP +IL+LM +E LTR N+ASHLQK+
Sbjct: 207 GKNSHGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKY 266
Query: 243 RLSLKRLGNKTLEAG 257
R K L + EA
Sbjct: 267 RSHRKHLMAREAEAA 281
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
+R+L D D + + + + L C Y+VT + +L D+++++V +P
Sbjct: 28 VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSK 87
Query: 84 GFKLLELVGLEMDL---PVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
FK+L+ + +L P++M+S + +V+K + GA +YL+KP+RM EL N W HV
Sbjct: 88 CFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 147
Query: 141 RRKKV 145
RR+++
Sbjct: 148 RRRRM 152
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 61/112 (54%), Gaps = 12/112 (10%)
Query: 158 EKSYRKRKDQDGEDEDEDGDDDGHENENSTT------------QKKPRVVWTTELHTKFI 205
E+ KR D E DGD D +S+ ++K +V WT ELH +F+
Sbjct: 108 EEVVSKRDDVAAETVTYDGDSDRKRKYSSSASSKNNRISNNEGKRKVKVDWTPELHRRFV 167
Query: 206 GAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKTLEAG 257
AV LG+DKAVP +IL+LM V LTR NVASHLQK+R K L + EA
Sbjct: 168 EAVEQLGVDKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKHLLAREAEAA 219
>sp|P14375|ZRAR_ECOLI Transcriptional regulatory protein ZraR OS=Escherichia coli (strain
K12) GN=zraR PE=1 SV=2
Length = 441
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>sp|Q8X613|ZRAR_ECO57 Transcriptional regulatory protein ZraR OS=Escherichia coli O157:H7
GN=zraR PE=3 SV=1
Length = 441
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +PV++++AYS + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>sp|Q9APD9|ZRAR_KLEOX Transcriptional regulatory protein ZraR OS=Klebsiella oxytoca
GN=zraR PE=3 SV=1
Length = 443
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 3/130 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + N + AL+ +RE FDLV+ D+ M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYRVALANNGLQALEKVREK--VFDLVLCDIRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
+ L E+ +PV++++AYS ++ + GA DYL+KP+ ++L+ T + +
Sbjct: 66 ETLKEIKTFNPSIPVLIMTAYSSVDTAVEALKSGALDYLIKPLDFDKLQLTLSEALAHTR 125
Query: 145 VDPKDQNRSP 154
+ +P
Sbjct: 126 LSESPVTETP 135
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 185 NSTTQKKPRVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRL 244
N T++KK V WT ELH KF+ AV LG+D+A+P +IL+LM V LTR NVASHLQKFR
Sbjct: 292 NKTSRKK--VDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKFRQ 349
Query: 245 SLKRL 249
K +
Sbjct: 350 HRKNI 354
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 18 DKFPIGMRVLAV------DDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFD 71
+ FP G++VL + D D + L Y VT AL + +N +F
Sbjct: 12 ENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFH 71
Query: 72 LVISDVYM-PDMDGFKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRME 130
+ I +V M + + FK LE + LP +M+S MK I GA ++L KP+ E
Sbjct: 72 IAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129
Query: 131 ELKNTWQHVIRR 142
+LKN WQHV+ +
Sbjct: 130 KLKNIWQHVVHK 141
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica
GN=GLK1 PE=2 SV=1
Length = 455
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%)
Query: 194 VVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLSLKRLGNKT 253
V WT ELH +F+ AV LG+DKAVP +IL++M ++ LTR N+ASHLQK+R K + +
Sbjct: 183 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHMIARE 242
Query: 254 LEA 256
EA
Sbjct: 243 AEA 245
>sp|Q8Z333|ZRAR_SALTI Transcriptional regulatory protein ZraR OS=Salmonella typhi GN=zraR
PE=3 SV=1
Length = 441
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + AL +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDVSHCTILQALLRGWGYNVALAYSGHDALAQVREK--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +P+++++A+S + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPILIMTAFSSVETAVEALKAGALDYLIKPLDFDRLQETLEKAL 121
>sp|P25852|ZRAR_SALTY Transcriptional regulatory protein ZraR OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=zraR PE=1 SV=2
Length = 441
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDDD + IL+ LR Y V + AL +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDVSHCTILQALLRGWGYNVALAYSGHDALAQVREK--VFDLVLCDVRMAEMDGI 65
Query: 86 KLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
L E+ L +P+++++A+S + ++ + GA DYL+KP+ + L+ T + +
Sbjct: 66 ATLKEIKALNPAIPILIMTAFSSVETAVEALKAGALDYLIKPLDFDRLQETLEKAL 121
>sp|Q9CD68|MPRA_MYCLE Response regulator MprA OS=Mycobacterium leprae (strain TN) GN=mprA
PE=3 SV=1
Length = 228
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 24 MRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMD 83
MR+LAVDDD+ + L + L Y V + N + AL+M+ R+ D ++ DV MP +D
Sbjct: 1 MRILAVDDDRAVRESLRRSLSFNGYSVELANDGVEALEMV--ARDRPDALVLDVMMPRLD 58
Query: 84 GFKLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
G ++ +L DLP+++L+A + G++ GA DYL KP +EEL + ++RR
Sbjct: 59 GLEVCRQLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARIRALLRR 118
Query: 143 KKVD 146
K D
Sbjct: 119 TKPD 122
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL
PE=2 SV=2
Length = 358
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 187 TTQKKPRVVWTTELHTKFIGAV-NLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFRLS 245
TT KPR+ WT ELH +F+ AV L G DKA PK I+ +M V+GLT ++ SHLQKFRL
Sbjct: 30 TTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLG 89
Query: 246 L---KRLGNKTLEAGMVASV 262
K G+ + + G AS
Sbjct: 90 KQPHKEYGDHSTKEGSRASA 109
>sp|Q9TLQ4|YCF27_CYACA Probable transcriptional regulator ycf27 OS=Cyanidium caldarium
GN=ycf27 PE=3 SV=1
Length = 249
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L VDD+ KIL+ L Y V+ ALK+ ++ DL+I DV MP +DG+
Sbjct: 14 LLIVDDENNIRKILQTRLTLLGYSVSTACNGEEALKIF--TTHSIDLIILDVMMPKLDGY 71
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
+ + + E D+P++ML+A D + G+ GA DY++KP EL+ Q ++RR
Sbjct: 72 GVCQEIRKESDIPIIMLTALEDVLDKVTGLELGADDYVIKPFSPRELEARIQSILRR 128
>sp|P28835|YCF27_PORAE Probable transcriptional regulator ycf27 OS=Porphyridium aerugineum
GN=ycf27 PE=3 SV=1
Length = 240
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++L +DD+ + +ILE L Y+V AL + + R + +LV+ D+ MP +DG
Sbjct: 5 KILVIDDEASIRRILETRLSIIGYDVISAADGEEALSIFK--REHPNLVVLDLMMPKLDG 62
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
+ + + + E D+P++ML+A SD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 63 YGVCQELRKESDVPIIMLTALSDVSDRITGLELGADDYIVKPFSPKELEARIRSVLRR 120
>sp|Q23917|PDE2_DICDI 3',5'-cyclic-nucleotide phosphodiesterase regA OS=Dictyostelium
discoideum GN=regA PE=1 SV=1
Length = 793
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 15/140 (10%)
Query: 21 PIGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMP 80
P +R+L DDD KIL L++ Y VT+ A + + + + +DLV++DV MP
Sbjct: 157 PSKVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMP 216
Query: 81 DMDGFKLLELVG---LEMDLPVVMLSAYS-DTKLVMKGINHGACDYLLKPVRMEELK--- 133
+ GF LL+ + + +PV+++S + D K I G D+L KP+ E LK
Sbjct: 217 HITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPIAKELLKKKI 276
Query: 134 -----NTWQHVIRRKKVDPK 148
+ WQ RRK+ + K
Sbjct: 277 DTVLQSIWQ---RRKEEEYK 293
>sp|P48259|YCF27_CYAPA Probable transcriptional regulator ycf27 OS=Cyanophora paradoxa
GN=ycf27 PE=3 SV=1
Length = 239
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++L VDD+ + +ILE L YEV AL + + N LV+ DV MP +DG
Sbjct: 7 KILVVDDEISIRRILETRLSMIGYEVVTAADGEEALTIFQLEHPN--LVVLDVMMPKLDG 64
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
+ + + + E D+P++ML+A D + G+ GA DY++KP +EL+ + ++RR
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSLLRR 122
>sp|P51358|YCF27_PORPU Probable transcriptional regulator ycf27 OS=Porphyra purpurea
GN=ycf27 PE=3 SV=1
Length = 243
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++L VDD+ + +ILE L YEV + AL + R+ + LV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLTIIGYEVITASNGEEALIIFRKEYPS--LVVLDVMMPKLDG 64
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
+ + + + E D+P++ML+A + + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRR 122
>sp|Q1XDC9|YCF27_PORYE Probable transcriptional regulator ycf27 OS=Porphyra yezoensis
GN=ycf27 PE=3 SV=2
Length = 243
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++L VDD+ + +ILE L YEV + AL + R+ + LV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLTIIGYEVITASNGEEALLVFRKEYPS--LVVLDVMMPKLDG 64
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
+ + + + E D+P++ML+A + + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRR 122
>sp|P33112|SPAR_BACIU Transcriptional regulatory protein SpaR OS=Bacillus subtilis
GN=spaR PE=3 SV=1
Length = 220
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++LAVDD++ L +++ LR Q++V + + + +DL++ DV MPD+DG
Sbjct: 3 KILAVDDEKDILVLIQNILRRDQHQVDILDHVHGQPP---DVFQGYDLILLDVMMPDIDG 59
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRKK 144
F+L + + +D P++ L+A ++ + ++KG+ G DY+ KP + EL +RR++
Sbjct: 60 FELCKQIRPLVDCPILFLTAKTEEEAIVKGLITGGDDYITKPFGVRELSARVNAHLRRER 119
Query: 145 VDPKDQNR 152
D R
Sbjct: 120 RDKHQSKR 127
>sp|P28257|YCF27_GALSU Probable transcriptional regulator ycf27 OS=Galdieria sulphuraria
GN=ycf27 PE=3 SV=1
Length = 255
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
++L DD+ + +ILE L YEV +AL + + N LV+ DV MP +DG
Sbjct: 9 KILIADDESSIRRILETRLSIIGYEVLTAPDGRSALFLFHKEHPN--LVVLDVMMPKIDG 66
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
+ + + + E D+P++ML+A D + G+ GA DY++KP +EL+ + V+RR
Sbjct: 67 YGVCQEIRKESDIPIIMLTALGDVTDRITGLELGADDYVVKPFSPKELEARIRCVLRR 124
>sp|Q4L6C6|ARLR_STAHJ Response regulator ArlR OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=arlR PE=3 SV=1
Length = 219
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 26 VLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDGF 85
+L V+D+Q + LE L Y V + L + NN+DL+I D+ +P+++G
Sbjct: 4 ILIVEDEQNLARFLELELTHDNYSVDIEYEGQAGLD--KALSNNYDLIILDLMLPNINGL 61
Query: 86 KLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRRK 143
++ V E P+++++A SDT + G+++GA DY++KP +EEL + V+RR+
Sbjct: 62 EICRRVRQEQSTPIIIITAKSDTYDKVTGLDYGADDYIVKPFEIEELFARIRAVLRRQ 119
>sp|O53894|MPRA_MYCTU Response regulator MprA OS=Mycobacterium tuberculosis GN=mprA PE=1
SV=1
Length = 230
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPD 81
+ +R+L VDDD+ + L + L Y V + + + AL M+ +R D ++ DV MP
Sbjct: 1 MSVRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRP--DALVLDVMMPR 58
Query: 82 MDGFKLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
+DG ++ +L G DLP+++L+A + G++ GA DYL KP +EEL + ++
Sbjct: 59 LDGLEVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALL 118
Query: 141 RRKKVDPKDQNRS 153
RR K P+D S
Sbjct: 119 RRTK--PEDAAES 129
>sp|A5U123|MPRA_MYCTA Response regulator MprA OS=Mycobacterium tuberculosis (strain ATCC
25177 / H37Ra) GN=mprA PE=3 SV=1
Length = 230
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Query: 22 IGMRVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPD 81
+ +R+L VDDD+ + L + L Y V + + + AL M+ +R D ++ DV MP
Sbjct: 1 MSVRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRP--DALVLDVMMPR 58
Query: 82 MDGFKLL-ELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVI 140
+DG ++ +L G DLP+++L+A + G++ GA DYL KP +EEL + ++
Sbjct: 59 LDGLEVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALL 118
Query: 141 RRKKVDPKDQNRS 153
RR K P+D S
Sbjct: 119 RRTK--PEDAAES 129
>sp|O78428|YCF27_GUITH Probable transcriptional regulator ycf27 OS=Guillardia theta
GN=ycf27 PE=3 SV=1
Length = 254
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDQTCLKILEKFLRECQYEVTVTNRAITALKMLRENRNNFDLVISDVYMPDMDG 84
+VL VDD+ + KILE L Y V + AL + + D+VI D+ MP +DG
Sbjct: 16 KVLIVDDEASIRKILETRLSMIGYFVVTASDGEEALNLFHQEMP--DVVILDIMMPKLDG 73
Query: 85 FKLLELVGLEMDLPVVMLSAYSDTKLVMKGINHGACDYLLKPVRMEELKNTWQHVIRR 142
+ + + + + D+P++ML+A D + G+ GA DY++KP +EL+ + V+RR
Sbjct: 74 YGVCQEIRKDSDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRAVLRR 131
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191,896,069
Number of Sequences: 539616
Number of extensions: 8071485
Number of successful extensions: 38781
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 580
Number of HSP's that attempted gapping in prelim test: 35616
Number of HSP's gapped (non-prelim): 2299
length of query: 529
length of database: 191,569,459
effective HSP length: 122
effective length of query: 407
effective length of database: 125,736,307
effective search space: 51174676949
effective search space used: 51174676949
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)