Query 009671
Match_columns 529
No_of_seqs 379 out of 3389
Neff 10.5
Searched_HMMs 13730
Date Mon Mar 25 10:26:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009671.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/009671hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2astb2 c.10.1.3 (B:2136-2419) 99.9 1.2E-23 8.9E-28 195.7 22.1 205 244-455 45-253 (284)
2 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.9 3.2E-20 2.3E-24 185.4 28.1 355 103-474 18-440 (460)
3 d2astb2 c.10.1.3 (B:2136-2419) 99.9 4.3E-21 3.2E-25 178.2 17.9 203 141-377 46-252 (284)
4 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 4.5E-18 3.3E-22 169.6 24.1 362 112-492 2-439 (460)
5 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.7 1.6E-16 1.1E-20 151.9 20.9 200 242-448 90-326 (344)
6 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.7 9.4E-15 6.8E-19 139.3 24.3 243 140-414 30-316 (344)
7 d2omza2 c.10.2.1 (A:33-416) In 99.5 2.8E-13 2E-17 131.0 18.3 288 112-440 44-365 (384)
8 d2omza2 c.10.2.1 (A:33-416) In 99.4 1.7E-12 1.2E-16 125.4 18.3 280 140-474 43-365 (384)
9 d1fs1a1 a.158.1.1 (A:109-149) 99.2 3.8E-12 2.7E-16 77.7 3.7 36 51-86 1-36 (41)
10 d1xkua_ c.10.2.7 (A:) Decorin 99.1 1.6E-11 1.1E-15 114.5 5.4 132 292-436 147-283 (305)
11 d1h6ua2 c.10.2.1 (A:36-262) In 99.1 7.2E-10 5.2E-14 98.0 13.6 123 291-433 103-225 (227)
12 d1h6ua2 c.10.2.1 (A:36-262) In 99.0 1.6E-09 1.2E-13 95.6 14.5 185 141-382 41-225 (227)
13 d1ozna_ c.10.2.7 (A:) Reticulo 99.0 4E-11 2.9E-15 110.3 3.8 61 348-411 176-236 (284)
14 d1h6ta2 c.10.2.1 (A:31-240) In 99.0 5.2E-10 3.8E-14 97.5 10.6 165 244-434 45-209 (210)
15 d1ozna_ c.10.2.7 (A:) Reticulo 99.0 1.5E-11 1.1E-15 113.2 0.1 187 240-438 51-238 (284)
16 d1xkua_ c.10.2.7 (A:) Decorin 99.0 2.4E-10 1.7E-14 106.2 8.4 226 167-440 31-256 (305)
17 d2omxa2 c.10.2.1 (A:37-235) In 99.0 5.4E-10 3.9E-14 96.5 10.0 162 243-430 38-199 (199)
18 d2omxa2 c.10.2.1 (A:37-235) In 98.9 5.1E-09 3.7E-13 90.2 13.0 51 320-379 149-199 (199)
19 d1h6ta2 c.10.2.1 (A:31-240) In 98.9 2.9E-09 2.1E-13 92.6 11.5 14 166-179 67-80 (210)
20 d1a9na_ c.10.2.4 (A:) Spliceso 98.8 1.3E-09 9.7E-14 90.2 4.5 82 347-431 61-145 (162)
21 d1p9ag_ c.10.2.7 (G:) von Will 98.8 6E-10 4.4E-14 101.1 1.3 110 320-438 99-208 (266)
22 d1ogqa_ c.10.2.8 (A:) Polygala 98.8 1.7E-10 1.3E-14 107.6 -2.4 227 168-436 51-279 (313)
23 d1p9ag_ c.10.2.7 (G:) von Will 98.7 1.6E-09 1.2E-13 98.1 3.6 60 320-385 147-206 (266)
24 d1pgva_ c.10.1.1 (A:) Tropomod 98.7 9.2E-08 6.7E-12 79.3 13.8 120 313-435 7-141 (167)
25 d1ogqa_ c.10.2.8 (A:) Polygala 98.7 1.9E-10 1.4E-14 107.4 -3.5 18 238-255 142-159 (313)
26 d1a9na_ c.10.2.4 (A:) Spliceso 98.7 7.3E-09 5.3E-13 85.7 6.2 88 320-415 62-152 (162)
27 d1nexb1 a.158.1.1 (B:270-369) 98.7 1.9E-09 1.4E-13 81.1 1.7 48 48-95 3-53 (100)
28 d1io0a_ c.10.1.1 (A:) Tropomod 98.7 2.8E-07 2E-11 76.4 15.1 120 314-436 10-143 (166)
29 d2ovrb1 a.158.1.1 (B:2263-2364 98.6 9E-09 6.6E-13 77.8 3.8 47 46-92 14-62 (102)
30 d1pgva_ c.10.1.1 (A:) Tropomod 98.6 2.2E-07 1.6E-11 77.0 12.7 115 294-411 14-142 (167)
31 d1io0a_ c.10.1.1 (A:) Tropomod 98.6 6.6E-07 4.8E-11 74.0 14.8 116 294-412 16-144 (166)
32 d1jl5a_ c.10.2.6 (A:) Leucine 98.5 2.6E-08 1.9E-12 93.9 5.5 56 399-474 283-338 (353)
33 d1jl5a_ c.10.2.6 (A:) Leucine 98.5 4.4E-08 3.2E-12 92.3 5.2 57 371-439 281-337 (353)
34 d1m9la_ c.10.3.1 (A:) Outer ar 98.5 1.4E-08 9.9E-13 87.1 1.2 105 268-384 45-150 (198)
35 d1dcea3 c.10.2.2 (A:444-567) R 98.4 4.9E-08 3.6E-12 76.5 3.8 29 275-305 2-30 (124)
36 d1p22a1 a.158.1.1 (A:135-252) 98.4 3.4E-08 2.5E-12 76.6 2.0 48 47-94 7-60 (118)
37 d1dcea3 c.10.2.2 (A:444-567) R 98.4 7.4E-08 5.4E-12 75.4 3.7 101 320-430 19-122 (124)
38 d1m9la_ c.10.3.1 (A:) Outer ar 98.4 4.7E-08 3.4E-12 83.7 2.0 127 291-431 44-180 (198)
39 d1xwdc1 c.10.2.7 (C:18-259) Fo 98.1 6.1E-09 4.4E-13 92.9 -10.2 186 241-435 49-235 (242)
40 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.1 3.3E-07 2.4E-11 78.0 1.3 106 272-384 30-136 (192)
41 d1xwdc1 c.10.2.7 (C:18-259) Fo 97.9 3.8E-07 2.8E-11 80.8 -2.3 18 346-363 198-215 (242)
42 d1w8aa_ c.10.2.7 (A:) Slit {Fr 97.8 3.5E-06 2.6E-10 71.4 2.4 35 168-202 30-64 (192)
43 d1koha1 c.10.2.3 (A:201-362) m 97.4 5.2E-05 3.8E-09 61.8 4.4 81 347-430 63-151 (162)
44 d1koha1 c.10.2.3 (A:201-362) m 97.2 0.00011 7.8E-09 59.8 3.9 88 316-406 60-152 (162)
45 d2ifga3 c.10.2.7 (A:36-191) Hi 97.1 8.9E-05 6.5E-09 59.9 2.9 10 402-411 105-114 (156)
46 d2ifga3 c.10.2.7 (A:36-191) Hi 96.9 0.00018 1.3E-08 57.9 2.8 14 292-305 53-66 (156)
No 1
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=1.2e-23 Score=195.69 Aligned_cols=205 Identities=16% Similarity=0.220 Sum_probs=183.2
Q ss_pred CCCCCeEeccccCCCchHHHHHHHhhcCCccEEEeeccccChHHHHHhhcCCCCCeEEecCCCCCChhhHHHHHHhCCCC
Q 009671 244 AKNLRTLKLFRCSGDWDKLLQLVTDRVTSLVEIHLERIQVTDVGLAAISNCLDLEIMHLVKTPECTNLGLAAVAERCKLL 323 (529)
Q Consensus 244 ~~~L~~L~l~~~~~~~~~~l~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~L~~L~L~~~~~~~~~~l~~l~~~~~~L 323 (529)
..+|++|++++| .+....+..+...+++|++|+++++.+++..+..++++++|++|++++|..+++.++..++..+++|
T Consensus 45 ~~~L~~LdLs~~-~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L 123 (284)
T d2astb2 45 PFRVQHMDLSNS-VIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 123 (284)
T ss_dssp CBCCCEEECTTC-EECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTC
T ss_pred CCCCCEEECCCC-ccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhc
Confidence 468999999987 4667778888999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCcccCccChHHHHHHH-hcCccccceEeecc--cCcHHHHHHHHhcCCCCCEEEccCCCCCChhHHHHHHHcCC
Q 009671 324 RKLHIDGWKANRIGDEGLIAVA-KCCPNLQELVLIGV--NPTRVSLEVLASNCQNLERLALCGSDTVGDVEISCIAAKCV 400 (529)
Q Consensus 324 ~~L~L~~~~~~~i~~~~l~~~~-~~~~~L~~L~L~~~--~i~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~l~~l~~~~~ 400 (529)
++|++++| ..+++.++.... ..+++|+.|+++++ .+++.++..+..+||+|++|++++|..+++.++..+. .++
T Consensus 124 ~~L~ls~c--~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~-~~~ 200 (284)
T d2astb2 124 DELNLSWC--FDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFF-QLN 200 (284)
T ss_dssp CEEECCCC--TTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGG-GCT
T ss_pred cccccccc--cccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhc-ccC
Confidence 99999986 578888876644 44689999999976 6889999999899999999999999999999888776 589
Q ss_pred cCCEEEeccC-CCCHHHHHHHHhcCCCccEEEeccCCCCCHHHHHHHHhcCCcEEE
Q 009671 401 ALKKLCIKSC-PVSDHGMEALAGGCPNLVKVKVKKCRAVTTEGADWLRARREYVVV 455 (529)
Q Consensus 401 ~L~~L~l~~~-~i~~~~l~~l~~~~~~L~~L~l~~c~~i~~~~~~~l~~~~~~l~l 455 (529)
+|++|++++| .+++.++..+. .+|+|+.|++.+| +++.++..+.+..|.+.+
T Consensus 201 ~L~~L~L~~C~~i~~~~l~~L~-~~~~L~~L~l~~~--~~d~~l~~l~~~lp~L~i 253 (284)
T d2astb2 201 YLQHLSLSRCYDIIPETLLELG-EIPTLKTLQVFGI--VPDGTLQLLKEALPHLQI 253 (284)
T ss_dssp TCCEEECTTCTTCCGGGGGGGG-GCTTCCEEECTTS--SCTTCHHHHHHHSTTSEE
T ss_pred cCCEEECCCCCCCChHHHHHHh-cCCCCCEEeeeCC--CCHHHHHHHHHhCccccc
Confidence 9999999998 49999988887 5999999999999 799999999998888766
No 2
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=3.2e-20 Score=185.39 Aligned_cols=355 Identities=20% Similarity=0.207 Sum_probs=209.1
Q ss_pred chHHHhccCCceeEEEeeccCCccccCHHHHHHHH---HcCCCccEEecCCCCCCCHHHHHHHHhcC----CCCCEEEec
Q 009671 103 MIPSLFSRFDVVTKLALKCDRRSVSVGDDALILIS---QKCRNLTRLKLRACRELTDAGMSVFAKNC----KGLKKLSCG 175 (529)
Q Consensus 103 ~l~~~~~~~~~l~~L~l~~~~~~~~~~~~~l~~l~---~~~~~L~~L~L~~~~~~~~~~l~~l~~~~----~~L~~L~L~ 175 (529)
.+..+++.+++++.|+|+ ...+++..+..++ ..+++|++|+|+++ .+++.++..+...+ .+|++|+++
T Consensus 18 ~~~~l~~~l~~l~~L~L~----~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N-~i~~~~~~~l~~~l~~~~~~L~~L~L~ 92 (460)
T d1z7xw1 18 RWAELLPLLQQCQVVRLD----DCGLTEARCKDISSALRVNPALAELNLRSN-ELGDVGVHCVLQGLQTPSCKIQKLSLQ 92 (460)
T ss_dssp HHHHHHHHHTTCSEEEEE----SSCCCHHHHHHHHHHHHTCTTCCEEECTTC-CCHHHHHHHHHHTTCSTTCCCCEEECT
T ss_pred HHHHHHHhCCCCCEEEeC----CCCCCHHHHHHHHHHHhcCCCCCEEECcCC-cCChHHHHHHHHHHhcCCCCCCEEECC
Confidence 345566677888888887 5677877776665 56788888888874 77777777776543 368888888
Q ss_pred CcccChHHHHHH---HhcCCCCCEEecCCccCCCccccccccC----------------CC-------------cccCcc
Q 009671 176 SCTFGAKGMNAV---LDNCSTLEELSVKRLRGITDGAAAEPIG----------------PG-------------VAASSL 223 (529)
Q Consensus 176 ~~~~~~~~l~~~---~~~~~~L~~L~l~~~~~~~~~~~~~~~~----------------~~-------------~~~~~L 223 (529)
+|.+++.++..+ +..+++|++|++.++. +.+.++..+.. .. .....+
T Consensus 93 ~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~-i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 171 (460)
T d1z7xw1 93 NCCLTGAGCGVLSSTLRTLPTLQELHLSDNL-LGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDF 171 (460)
T ss_dssp TSCCBGGGHHHHHHHTTSCTTCCEEECCSSB-CHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTC
T ss_pred CCCccccccccccchhhcccccccccccccc-chhhhhhhhhhcccccccccccccccccccchhhhccccccccccccc
Confidence 888877665544 3467888888887652 32221110000 00 000111
Q ss_pred chhhccccccCCc----chh-hhhcCCCCCeEeccccCCCchH--HHHHHHhhcCCccEEEeeccccChHHHHHh-----
Q 009671 224 KTVCLKELYNGQC----FGP-LIIGAKNLRTLKLFRCSGDWDK--LLQLVTDRVTSLVEIHLERIQVTDVGLAAI----- 291 (529)
Q Consensus 224 ~~l~l~~~~~~~~----~~~-~~~~~~~L~~L~l~~~~~~~~~--~l~~l~~~~~~L~~L~l~~~~l~~~~~~~l----- 291 (529)
+.+.+........ ... +.........+.+..+...... .........+.++.+.+..+.+.+......
T Consensus 172 ~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~~~~~~~~~~~ 251 (460)
T d1z7xw1 172 KELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLL 251 (460)
T ss_dssp CEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHT
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhccccccccchhhcccc
Confidence 1111111110000 000 1112234455555554322221 222334456678888888776655443221
Q ss_pred hcCCCCCeEEecCCCCCChhhHHHH---HHhCCCCcEEEecCcccCccChHHHHHHHhc----CccccceEeecccCcHH
Q 009671 292 SNCLDLEIMHLVKTPECTNLGLAAV---AERCKLLRKLHIDGWKANRIGDEGLIAVAKC----CPNLQELVLIGVNPTRV 364 (529)
Q Consensus 292 ~~~~~L~~L~L~~~~~~~~~~l~~l---~~~~~~L~~L~L~~~~~~~i~~~~l~~~~~~----~~~L~~L~L~~~~i~~~ 364 (529)
.....++.++++++ .+........ ....+.++.++++++ .+++.++..+... ...|+.++++++.+++.
T Consensus 252 ~~~~~l~~l~l~~n-~i~~~~~~~~~~~l~~~~~l~~l~l~~n---~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~ 327 (460)
T d1z7xw1 252 HPSSRLRTLWIWEC-GITAKGCGDLCRVLRAKESLKELSLAGN---ELGDEGARLLCETLLEPGCQLESLWVKSCSFTAA 327 (460)
T ss_dssp STTCCCCEEECTTS-CCCHHHHHHHHHHHHHCTTCCEEECTTC---CCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGG
T ss_pred cccccccccccccc-cccccccccccccccccccccccccccc---cccccccchhhccccccccccccccccccchhhh
Confidence 23567888888877 3444433322 234677888888764 4666666555432 35688888888877766
Q ss_pred HHHHH---HhcCCCCCEEEccCCCCCChhHHHHHHHc----CCcCCEEEeccCCCCHHHHHHHHh---cCCCccEEEecc
Q 009671 365 SLEVL---ASNCQNLERLALCGSDTVGDVEISCIAAK----CVALKKLCIKSCPVSDHGMEALAG---GCPNLVKVKVKK 434 (529)
Q Consensus 365 ~l~~l---~~~~~~L~~L~l~~~~~~~~~~l~~l~~~----~~~L~~L~l~~~~i~~~~l~~l~~---~~~~L~~L~l~~ 434 (529)
+...+ ...+++|++|+|+++ .++++++..++.. .+.|++|+|++|.+++.++..+.+ .+++|++|+|++
T Consensus 328 ~~~~l~~~~~~~~~L~~L~Ls~N-~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~ 406 (460)
T d1z7xw1 328 CCSHFSSVLAQNRFLLELQISNN-RLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSN 406 (460)
T ss_dssp GHHHHHHHHHHCSSCCEEECCSS-BCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCS
T ss_pred hhhhcccccccccchhhhheeee-cccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCC
Confidence 65443 345677888888777 4777776666542 456888888888888877666543 367888888888
Q ss_pred CCCCCHHHHHHHHhcCCcEEEEeccCccccccccCCcccc
Q 009671 435 CRAVTTEGADWLRARREYVVVNLDSGEAEHQDASDGGVQE 474 (529)
Q Consensus 435 c~~i~~~~~~~l~~~~~~l~l~l~~~~~~~ld~~~~~~~~ 474 (529)
+. ++++++..+.+... -....+..+++.++.+.+
T Consensus 407 N~-i~~~g~~~l~~~l~-----~~~~~L~~l~l~~~~~~~ 440 (460)
T d1z7xw1 407 NC-LGDAGILQLVESVR-----QPGCLLEQLVLYDIYWSE 440 (460)
T ss_dssp SS-CCHHHHHHHHHHHT-----STTCCCCEEECTTCCCCH
T ss_pred Cc-CCHHHHHHHHHHHH-----hCCCccCEEECCCCCCCH
Confidence 75 88888777766321 112235555566665554
No 3
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=4.3e-21 Score=178.25 Aligned_cols=203 Identities=18% Similarity=0.269 Sum_probs=121.2
Q ss_pred CCccEEecCCCCCCCHHHHHHHHhcCCCCCEEEecCcccChHHHHHHHhcCCCCCEEecCCccCCCccccccccCCCccc
Q 009671 141 RNLTRLKLRACRELTDAGMSVFAKNCKGLKKLSCGSCTFGAKGMNAVLDNCSTLEELSVKRLRGITDGAAAEPIGPGVAA 220 (529)
Q Consensus 141 ~~L~~L~L~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~ 220 (529)
.+|++|++++| .+++..+..++..|++|++|++++|.+++..+..+ ..+++|++|++++|..+++.++.
T Consensus 46 ~~L~~LdLs~~-~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l-~~~~~L~~L~Ls~c~~itd~~l~--------- 114 (284)
T d2astb2 46 FRVQHMDLSNS-VIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTL-AKNSNLVRLNLSGCSGFSEFALQ--------- 114 (284)
T ss_dssp BCCCEEECTTC-EECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHH-TTCTTCSEEECTTCBSCCHHHHH---------
T ss_pred CCCCEEECCCC-ccCHHHHHHHHHhCCCcccccccccCCCcHHHHHH-hcCCCCcCccccccccccccccc---------
Confidence 35666666664 55666666666666666666666666665555443 34566666666666555553322
Q ss_pred CccchhhccccccCCcchhhhhcCCCCCeEeccccCCCchHHHHH-HHhhcCCccEEEeecc--ccChHHHHHhh-cCCC
Q 009671 221 SSLKTVCLKELYNGQCFGPLIIGAKNLRTLKLFRCSGDWDKLLQL-VTDRVTSLVEIHLERI--QVTDVGLAAIS-NCLD 296 (529)
Q Consensus 221 ~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~l~~-l~~~~~~L~~L~l~~~--~l~~~~~~~l~-~~~~ 296 (529)
.+...|++|++|++++|..+++..+.. +...+++|+.|+++++ .+++.++..+. .|++
T Consensus 115 ------------------~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~ 176 (284)
T d2astb2 115 ------------------TLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPN 176 (284)
T ss_dssp ------------------HHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTT
T ss_pred ------------------hhhHHHHhccccccccccccccccchhhhcccccccchhhhccccccccccccccccccccc
Confidence 122456666666666666665555443 3334456666666654 45666655553 4666
Q ss_pred CCeEEecCCCCCChhhHHHHHHhCCCCcEEEecCcccCccChHHHHHHHhcCccccceEeecccCcHHHHHHHHhcCCCC
Q 009671 297 LEIMHLVKTPECTNLGLAAVAERCKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNL 376 (529)
Q Consensus 297 L~~L~L~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~i~~~~l~~~~~~~~~L~~L~L~~~~i~~~~l~~l~~~~~~L 376 (529)
|++|++++|..+++.++..+.+ +++|++|++++| ..+++.++..+. .+|+|+.|++.++ +++.++..+...+|+|
T Consensus 177 L~~L~L~~~~~itd~~~~~l~~-~~~L~~L~L~~C--~~i~~~~l~~L~-~~~~L~~L~l~~~-~~d~~l~~l~~~lp~L 251 (284)
T d2astb2 177 LVHLDLSDSVMLKNDCFQEFFQ-LNYLQHLSLSRC--YDIIPETLLELG-EIPTLKTLQVFGI-VPDGTLQLLKEALPHL 251 (284)
T ss_dssp CSEEECTTCTTCCGGGGGGGGG-CTTCCEEECTTC--TTCCGGGGGGGG-GCTTCCEEECTTS-SCTTCHHHHHHHSTTS
T ss_pred ccccccccccCCCchhhhhhcc-cCcCCEEECCCC--CCCChHHHHHHh-cCCCCCEEeeeCC-CCHHHHHHHHHhCccc
Confidence 7777776666666666555543 666777777654 356665555543 4667777777666 6666666666666665
Q ss_pred C
Q 009671 377 E 377 (529)
Q Consensus 377 ~ 377 (529)
+
T Consensus 252 ~ 252 (284)
T d2astb2 252 Q 252 (284)
T ss_dssp E
T ss_pred c
Confidence 5
No 4
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=4.5e-18 Score=169.56 Aligned_cols=362 Identities=18% Similarity=0.181 Sum_probs=256.9
Q ss_pred CceeEEEeeccCCccccCHHHHHHHHHcCCCccEEecCCCCCCCHHHHHHHH---hcCCCCCEEEecCcccChHHHHHHH
Q 009671 112 DVVTKLALKCDRRSVSVGDDALILISQKCRNLTRLKLRACRELTDAGMSVFA---KNCKGLKKLSCGSCTFGAKGMNAVL 188 (529)
Q Consensus 112 ~~l~~L~l~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~l~~l~---~~~~~L~~L~L~~~~~~~~~l~~~~ 188 (529)
.+|+.|+++ +..+++..+..+...+++++.|+|.+| .+++.++..+. ..+++|++|+|++|.+++.++..+.
T Consensus 2 ~~l~~ld~~----~~~i~~~~~~~l~~~l~~l~~L~L~~~-~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~ 76 (460)
T d1z7xw1 2 LDIQSLDIQ----CEELSDARWAELLPLLQQCQVVRLDDC-GLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVL 76 (460)
T ss_dssp EEEEEEEEE----SCCCCHHHHHHHHHHHTTCSEEEEESS-CCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHH
T ss_pred CCCCEEEee----CCcCChHHHHHHHHhCCCCCEEEeCCC-CCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHH
Confidence 468999999 788999998888888999999999998 78988876654 6789999999999999888888877
Q ss_pred hcC----CCCCEEecCCccCCCccccccccCCCcccCccchhhccccccCCc----------------------------
Q 009671 189 DNC----STLEELSVKRLRGITDGAAAEPIGPGVAASSLKTVCLKELYNGQC---------------------------- 236 (529)
Q Consensus 189 ~~~----~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~---------------------------- 236 (529)
..+ .+|++|+++++ .+++.+...+......+++|+.|.+.++.....
T Consensus 77 ~~l~~~~~~L~~L~L~~n-~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 155 (460)
T d1z7xw1 77 QGLQTPSCKIQKLSLQNC-CLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSA 155 (460)
T ss_dssp HTTCSTTCCCCEEECTTS-CCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBG
T ss_pred HHHhcCCCCCCEEECCCC-Cccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccch
Confidence 654 57999999998 477655443332223678888888866432110
Q ss_pred -----chhhhhcCCCCCeEeccccCCCchHHHHH----HHhhcCCccEEEeeccccChHHHH----HhhcCCCCCeEEec
Q 009671 237 -----FGPLIIGAKNLRTLKLFRCSGDWDKLLQL----VTDRVTSLVEIHLERIQVTDVGLA----AISNCLDLEIMHLV 303 (529)
Q Consensus 237 -----~~~~~~~~~~L~~L~l~~~~~~~~~~l~~----l~~~~~~L~~L~l~~~~l~~~~~~----~l~~~~~L~~L~L~ 303 (529)
....+...+.++.+.+..+.. .+..... +.........+.+..+.+...... .+...+.++.+.+.
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~ls~~~~-~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~ 234 (460)
T d1z7xw1 156 ASCEPLASVLRAKPDFKELTVSNNDI-NEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALG 234 (460)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSBC-HHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECC
T ss_pred hhhccccccccccccccccccccccc-ccccccccccccccccccccccccccccccchhhhcccccccccccccccchh
Confidence 011223456777777776542 2222222 223333467777777655544332 33468899999998
Q ss_pred CCCCCChhhHHH----HHHhCCCCcEEEecCcccCccChHHHH---HHHhcCccccceEeecccCcHHHHHHHHh----c
Q 009671 304 KTPECTNLGLAA----VAERCKLLRKLHIDGWKANRIGDEGLI---AVAKCCPNLQELVLIGVNPTRVSLEVLAS----N 372 (529)
Q Consensus 304 ~~~~~~~~~l~~----l~~~~~~L~~L~L~~~~~~~i~~~~l~---~~~~~~~~L~~L~L~~~~i~~~~l~~l~~----~ 372 (529)
++. +.+.+... .......++.++++++. +...... ......+.++.++++++.+.+.++..+.. .
T Consensus 235 ~n~-~~~~~~~~~~~~~~~~~~~l~~l~l~~n~---i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~ 310 (460)
T d1z7xw1 235 SNK-LGDVGMAELCPGLLHPSSRLRTLWIWECG---ITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEP 310 (460)
T ss_dssp SSB-CHHHHHHHHHHHHTSTTCCCCEEECTTSC---CCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTST
T ss_pred hcc-ccccccchhhccccccccccccccccccc---ccccccccccccccccccccccccccccccccccchhhcccccc
Confidence 773 33333322 23345789999998864 4444333 33455789999999999999988877644 3
Q ss_pred CCCCCEEEccCCCCCChhHHHHHH---HcCCcCCEEEeccCCCCHHHHHHHHh----cCCCccEEEeccCCCCCHHHHHH
Q 009671 373 CQNLERLALCGSDTVGDVEISCIA---AKCVALKKLCIKSCPVSDHGMEALAG----GCPNLVKVKVKKCRAVTTEGADW 445 (529)
Q Consensus 373 ~~~L~~L~l~~~~~~~~~~l~~l~---~~~~~L~~L~l~~~~i~~~~l~~l~~----~~~~L~~L~l~~c~~i~~~~~~~ 445 (529)
...|+.+.++++. +++.++..++ ..+++|++|+|++|.++++++..+.+ ..+.|++|++++|. +++.++..
T Consensus 311 ~~~L~~l~l~~~~-l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~-i~~~~~~~ 388 (460)
T d1z7xw1 311 GCQLESLWVKSCS-FTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD-VSDSSCSS 388 (460)
T ss_dssp TCCCCEEECTTSC-CBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC-CCHHHHHH
T ss_pred ccccccccccccc-hhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCC-CChHHHHH
Confidence 4579999999885 7777655553 55789999999999999998887764 35679999999997 99999998
Q ss_pred HHhcCCcEEEEeccCccccccccCCccccCCccC----------CCcccccCccccC
Q 009671 446 LRARREYVVVNLDSGEAEHQDASDGGVQENGIEF----------PPQMVQPSVASSR 492 (529)
Q Consensus 446 l~~~~~~l~l~l~~~~~~~ld~~~~~~~~~~~~~----------pl~~l~l~~c~~~ 492 (529)
+.+.. .....+.++|+++|.+.+.|... .++.+.+.++...
T Consensus 389 l~~~l------~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~ 439 (460)
T d1z7xw1 389 LAATL------LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 439 (460)
T ss_dssp HHHHH------HHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred HHHHH------hcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCC
Confidence 87742 11245778889999988765321 2778888876644
No 5
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.72 E-value=1.6e-16 Score=151.90 Aligned_cols=200 Identities=18% Similarity=0.171 Sum_probs=130.8
Q ss_pred hcCCCCCeEeccccCCCchH---HHHHHHhhcCCccEEEeeccccChHHHHHh-------------hcCCCCCeEEecCC
Q 009671 242 IGAKNLRTLKLFRCSGDWDK---LLQLVTDRVTSLVEIHLERIQVTDVGLAAI-------------SNCLDLEIMHLVKT 305 (529)
Q Consensus 242 ~~~~~L~~L~l~~~~~~~~~---~l~~l~~~~~~L~~L~l~~~~l~~~~~~~l-------------~~~~~L~~L~L~~~ 305 (529)
..+++|++|++++|. +.+. .+.......++|++|++++|.+++.+...+ ...+.|+.+.++++
T Consensus 90 ~~~~~L~~L~L~~n~-i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n 168 (344)
T d2ca6a1 90 LKCPKLHTVRLSDNA-FGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRN 168 (344)
T ss_dssp TTCTTCCEEECCSCC-CCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSS
T ss_pred hhCCCcccccccccc-cccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccc
Confidence 445556666665543 1221 222233345556666666655544332222 24678888888876
Q ss_pred CCCChhhHHHH---HHhCCCCcEEEecCcccCccChHHHHHH----HhcCccccceEeecccCcHHHHHHH---HhcCCC
Q 009671 306 PECTNLGLAAV---AERCKLLRKLHIDGWKANRIGDEGLIAV----AKCCPNLQELVLIGVNPTRVSLEVL---ASNCQN 375 (529)
Q Consensus 306 ~~~~~~~l~~l---~~~~~~L~~L~L~~~~~~~i~~~~l~~~----~~~~~~L~~L~L~~~~i~~~~l~~l---~~~~~~ 375 (529)
.+++.+...+ ...+++|++|++++| .+++.++..+ ...+++|+.|++++|.+++.+...+ ...+++
T Consensus 169 -~i~~~~~~~l~~~l~~~~~L~~L~L~~n---~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~ 244 (344)
T d2ca6a1 169 -RLENGSMKEWAKTFQSHRLLHTVKMVQN---GIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPN 244 (344)
T ss_dssp -CCTGGGHHHHHHHHHHCTTCCEEECCSS---CCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTT
T ss_pred -cccccccccccchhhhhhhhcccccccc---cccccccccchhhhhcchhhhccccccccccccccccccccccccccc
Confidence 5566655544 345788999999875 5777665443 3456889999999998888765554 357888
Q ss_pred CCEEEccCCCCCChhHHHHHHHc-----CCcCCEEEeccCCCCHHHHHHHHh----cCCCccEEEeccCCCCCH--HHHH
Q 009671 376 LERLALCGSDTVGDVEISCIAAK-----CVALKKLCIKSCPVSDHGMEALAG----GCPNLVKVKVKKCRAVTT--EGAD 444 (529)
Q Consensus 376 L~~L~l~~~~~~~~~~l~~l~~~-----~~~L~~L~l~~~~i~~~~l~~l~~----~~~~L~~L~l~~c~~i~~--~~~~ 444 (529)
|++|++++|. +++.++..++.. .+.|++|++++|.|+++++..+.+ .++.|++|++.++. +.+ +.+.
T Consensus 245 L~~L~Ls~n~-i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~-~~~~~~~~~ 322 (344)
T d2ca6a1 245 LRELGLNDCL-LSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNR-FSEEDDVVD 322 (344)
T ss_dssp CCEEECTTCC-CCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSB-SCTTSHHHH
T ss_pred chhhhhhcCc-cCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCc-CCCcchHHH
Confidence 9999998885 888887777643 356899999999998888776664 46789999998877 543 3454
Q ss_pred HHHh
Q 009671 445 WLRA 448 (529)
Q Consensus 445 ~l~~ 448 (529)
.+.+
T Consensus 323 ~l~~ 326 (344)
T d2ca6a1 323 EIRE 326 (344)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 6
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.66 E-value=9.4e-15 Score=139.33 Aligned_cols=243 Identities=15% Similarity=0.138 Sum_probs=153.5
Q ss_pred CCCccEEecCCCCCCCHHHHHHHHhc---CCCCCEEEecCcccC------hHHHHH---HHhcCCCCCEEecCCccCCCc
Q 009671 140 CRNLTRLKLRACRELTDAGMSVFAKN---CKGLKKLSCGSCTFG------AKGMNA---VLDNCSTLEELSVKRLRGITD 207 (529)
Q Consensus 140 ~~~L~~L~L~~~~~~~~~~l~~l~~~---~~~L~~L~L~~~~~~------~~~l~~---~~~~~~~L~~L~l~~~~~~~~ 207 (529)
...|+.|+|+++ .+++.++..+... .++|+.|+++++... ..++.. .+..+++|++|++.++ .++.
T Consensus 30 ~~~l~~L~Ls~n-~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n-~i~~ 107 (344)
T d2ca6a1 30 DDSVKEIVLSGN-TIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN-AFGP 107 (344)
T ss_dssp CSCCCEEECTTS-EECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC-CCCT
T ss_pred CCCCCEEECcCC-cCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccc-cccc
Confidence 556666666653 5666665555443 345666666654321 122222 2334566666666655 2333
Q ss_pred cccccccCCCcccCccchhhccccccCCcchhhhhcCCCCCeEeccccCCCchHHHHH------------HHhhcCCccE
Q 009671 208 GAAAEPIGPGVAASSLKTVCLKELYNGQCFGPLIIGAKNLRTLKLFRCSGDWDKLLQL------------VTDRVTSLVE 275 (529)
Q Consensus 208 ~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~l~~------------l~~~~~~L~~ 275 (529)
.++.. +...+..+++|++|++++|. +.+..... .....+.|+.
T Consensus 108 ~~~~~------------------------l~~~l~~~~~L~~L~l~~n~-l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~ 162 (344)
T d2ca6a1 108 TAQEP------------------------LIDFLSKHTPLEHLYLHNNG-LGPQAGAKIARALQELAVNKKAKNAPPLRS 162 (344)
T ss_dssp TTHHH------------------------HHHHHHHCTTCCEEECCSSC-CHHHHHHHHHHHHHHHHHHHHHHTCCCCCE
T ss_pred ccccc------------------------hhhhhcccccchheeccccc-ccccccccccccccccccccccccCcccce
Confidence 22111 12233455667777776653 33222111 2234567888
Q ss_pred EEeeccccChHHHHHh----hcCCCCCeEEecCCCCCChhhHHHH----HHhCCCCcEEEecCcccCccChHHHHHH---
Q 009671 276 IHLERIQVTDVGLAAI----SNCLDLEIMHLVKTPECTNLGLAAV----AERCKLLRKLHIDGWKANRIGDEGLIAV--- 344 (529)
Q Consensus 276 L~l~~~~l~~~~~~~l----~~~~~L~~L~L~~~~~~~~~~l~~l----~~~~~~L~~L~L~~~~~~~i~~~~l~~~--- 344 (529)
+.+.++.+++.+...+ ..++.|+.|++.+| .+++.+...+ ...+++|+.|+|++| .+++.+...+
T Consensus 163 l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n-~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N---~i~~~g~~~L~~~ 238 (344)
T d2ca6a1 163 IICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQN-GIRPEGIEHLLLEGLAYCQELKVLDLQDN---TFTHLGSSALAIA 238 (344)
T ss_dssp EECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSS-CCCHHHHHHHHHTTGGGCTTCCEEECCSS---CCHHHHHHHHHHH
T ss_pred eecccccccccccccccchhhhhhhhcccccccc-cccccccccchhhhhcchhhhcccccccc---ccccccccccccc
Confidence 8888888877766554 45788999999887 5676655432 335688999999875 4666665544
Q ss_pred HhcCccccceEeecccCcHHHHHHHHhc-----CCCCCEEEccCCCCCChhHHHHHHH----cCCcCCEEEeccCCCCH
Q 009671 345 AKCCPNLQELVLIGVNPTRVSLEVLASN-----CQNLERLALCGSDTVGDVEISCIAA----KCVALKKLCIKSCPVSD 414 (529)
Q Consensus 345 ~~~~~~L~~L~L~~~~i~~~~l~~l~~~-----~~~L~~L~l~~~~~~~~~~l~~l~~----~~~~L~~L~l~~~~i~~ 414 (529)
...+++|++|+|++|.+++.+...++.. .+.|++|+++++. ++++++..+.. ++++|+.|+|++|.+.+
T Consensus 239 l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~-i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 239 LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNE-IELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp GGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSC-CBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred ccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCc-CChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 4567899999999999998887776542 3569999999885 88888666653 57889999999998644
No 7
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.50 E-value=2.8e-13 Score=131.03 Aligned_cols=288 Identities=19% Similarity=0.178 Sum_probs=171.3
Q ss_pred CceeEEEeeccCCccccCHHHHHHHHHcCCCccEEecCCCCCCCHHHHHHHHhcCCCCCEEEecCcccChHHHHHHHhcC
Q 009671 112 DVVTKLALKCDRRSVSVGDDALILISQKCRNLTRLKLRACRELTDAGMSVFAKNCKGLKKLSCGSCTFGAKGMNAVLDNC 191 (529)
Q Consensus 112 ~~l~~L~l~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~l~~~~~~~ 191 (529)
.++++|+++ ...+++ +..+ ..+++|++|+++++ .+++.. . +..+++|++|++++|.+... .. +..+
T Consensus 44 ~~l~~L~l~----~~~I~~--l~gl-~~L~nL~~L~Ls~N-~l~~l~--~-l~~L~~L~~L~L~~n~i~~i--~~-l~~l 109 (384)
T d2omza2 44 DQVTTLQAD----RLGIKS--IDGV-EYLNNLTQINFSNN-QLTDIT--P-LKNLTKLVDILMNNNQIADI--TP-LANL 109 (384)
T ss_dssp TTCCEEECC----SSCCCC--CTTG-GGCTTCCEEECCSS-CCCCCG--G-GTTCTTCCEEECCSSCCCCC--GG-GTTC
T ss_pred CCCCEEECC----CCCCCC--cccc-ccCCCCCEEeCcCC-cCCCCc--c-ccCCcccccccccccccccc--cc-cccc
Confidence 456777776 333332 1222 34778888888774 454432 1 34577888888888776432 11 4467
Q ss_pred CCCCEEecCCccCCCccccccccCCC---------------------------cccCccchhhc-------cccccCCcc
Q 009671 192 STLEELSVKRLRGITDGAAAEPIGPG---------------------------VAASSLKTVCL-------KELYNGQCF 237 (529)
Q Consensus 192 ~~L~~L~l~~~~~~~~~~~~~~~~~~---------------------------~~~~~L~~l~l-------~~~~~~~~~ 237 (529)
++|+.|++.++............... .....+..+.. .........
T Consensus 110 ~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (384)
T d2omza2 110 TNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD 189 (384)
T ss_dssp TTCCEEECCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCC
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccccccc
Confidence 77888877654322111111000000 00000000000 000111122
Q ss_pred hhhhhcCCCCCeEeccccCCCchHHHHHHHhhcCCccEEEeeccccChHHHHHhhcCCCCCeEEecCCCCCChhhHHHHH
Q 009671 238 GPLIIGAKNLRTLKLFRCSGDWDKLLQLVTDRVTSLVEIHLERIQVTDVGLAAISNCLDLEIMHLVKTPECTNLGLAAVA 317 (529)
Q Consensus 238 ~~~~~~~~~L~~L~l~~~~~~~~~~l~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~L~~L~L~~~~~~~~~~l~~l~ 317 (529)
......+++++.+.++++....... ...+++|++|+++++.+++.+ .+..+++|+.|++.++. ++... . .
T Consensus 190 ~~~~~~l~~~~~l~l~~n~i~~~~~----~~~~~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~-l~~~~--~-~ 259 (384)
T d2omza2 190 ISVLAKLTNLESLIATNNQISDITP----LGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQ-ISNLA--P-L 259 (384)
T ss_dssp CGGGGGCTTCSEEECCSSCCCCCGG----GGGCTTCCEEECCSSCCCCCG--GGGGCTTCSEEECCSSC-CCCCG--G-G
T ss_pred ccccccccccceeeccCCccCCCCc----ccccCCCCEEECCCCCCCCcc--hhhcccccchhccccCc-cCCCC--c-c
Confidence 3345677889999988764221111 245678999999999887643 46678999999999874 33322 2 2
Q ss_pred HhCCCCcEEEecCcccCccChHHHHHHHhcCccccceEeecccCcHHHHHHHHhcCCCCCEEEccCCCCCChhHHHHHHH
Q 009671 318 ERCKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSDTVGDVEISCIAA 397 (529)
Q Consensus 318 ~~~~~L~~L~L~~~~~~~i~~~~l~~~~~~~~~L~~L~L~~~~i~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~l~~l~~ 397 (529)
..+++|+.|+++++....+.+ ...++.++.+.+..+.+++.. .+ ..+++++.|+++++. +++.. . ..
T Consensus 260 ~~~~~L~~L~l~~~~l~~~~~------~~~~~~l~~l~~~~n~l~~~~--~~-~~~~~l~~L~ls~n~-l~~l~--~-l~ 326 (384)
T d2omza2 260 SGLTKLTELKLGANQISNISP------LAGLTALTNLELNENQLEDIS--PI-SNLKNLTYLTLYFNN-ISDIS--P-VS 326 (384)
T ss_dssp TTCTTCSEEECCSSCCCCCGG------GTTCTTCSEEECCSSCCSCCG--GG-GGCTTCSEEECCSSC-CSCCG--G-GG
T ss_pred cccccCCEeeccCcccCCCCc------ccccccccccccccccccccc--cc-chhcccCeEECCCCC-CCCCc--c-cc
Confidence 347899999998875443322 235778888888888776532 22 678889999998874 44421 1 34
Q ss_pred cCCcCCEEEeccCCCCHHHHHHHHhcCCCccEEEeccCCCCCH
Q 009671 398 KCVALKKLCIKSCPVSDHGMEALAGGCPNLVKVKVKKCRAVTT 440 (529)
Q Consensus 398 ~~~~L~~L~l~~~~i~~~~l~~l~~~~~~L~~L~l~~c~~i~~ 440 (529)
.+++|++|++++|.+++. ..+. .+++|++|++++|. +++
T Consensus 327 ~l~~L~~L~L~~n~l~~l--~~l~-~l~~L~~L~l~~N~-l~~ 365 (384)
T d2omza2 327 SLTKLQRLFFANNKVSDV--SSLA-NLTNINWLSAGHNQ-ISD 365 (384)
T ss_dssp GCTTCCEEECCSSCCCCC--GGGG-GCTTCCEEECCSSC-CCB
T ss_pred cCCCCCEEECCCCCCCCC--hhHc-CCCCCCEEECCCCc-CCC
Confidence 688999999999987752 3444 68899999998886 664
No 8
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.43 E-value=1.7e-12 Score=125.40 Aligned_cols=280 Identities=15% Similarity=0.125 Sum_probs=180.5
Q ss_pred CCCccEEecCCCCCCCHHHHHHHHhcCCCCCEEEecCcccChHHHHHHHhcCCCCCEEecCCccCCCccccccccCCCcc
Q 009671 140 CRNLTRLKLRACRELTDAGMSVFAKNCKGLKKLSCGSCTFGAKGMNAVLDNCSTLEELSVKRLRGITDGAAAEPIGPGVA 219 (529)
Q Consensus 140 ~~~L~~L~L~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~ 219 (529)
..+|++|+++++ .+++- .. ...+++|++|++++|.+++-. . ++.+++|++|++.++.-.....+. .
T Consensus 43 l~~l~~L~l~~~-~I~~l--~g-l~~L~nL~~L~Ls~N~l~~l~--~-l~~L~~L~~L~L~~n~i~~i~~l~-------~ 108 (384)
T d2omza2 43 LDQVTTLQADRL-GIKSI--DG-VEYLNNLTQINFSNNQLTDIT--P-LKNLTKLVDILMNNNQIADITPLA-------N 108 (384)
T ss_dssp HTTCCEEECCSS-CCCCC--TT-GGGCTTCCEEECCSSCCCCCG--G-GTTCTTCCEEECCSSCCCCCGGGT-------T
T ss_pred hCCCCEEECCCC-CCCCc--cc-cccCCCCCEEeCcCCcCCCCc--c-ccCCcccccccccccccccccccc-------c
Confidence 357999999986 55431 12 246899999999999975432 2 568999999999987422222221 5
Q ss_pred cCccchhhccccccCCcchhhhhcCCCCCeE-------------------------------------------eccccC
Q 009671 220 ASSLKTVCLKELYNGQCFGPLIIGAKNLRTL-------------------------------------------KLFRCS 256 (529)
Q Consensus 220 ~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L-------------------------------------------~l~~~~ 256 (529)
+++|+.+.+........... .....+..+ ....+.
T Consensus 109 l~~L~~L~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (384)
T d2omza2 109 LTNLTGLTLFNNQITDIDPL--KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK 186 (384)
T ss_dssp CTTCCEEECCSSCCCCCGGG--TTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSC
T ss_pred cccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccc
Confidence 66777776654322111100 001111111 111100
Q ss_pred CCchHHHHHHHhhcCCccEEEeeccccChHHHHHhhcCCCCCeEEecCCCCCChhhHHHHHHhCCCCcEEEecCcccCcc
Q 009671 257 GDWDKLLQLVTDRVTSLVEIHLERIQVTDVGLAAISNCLDLEIMHLVKTPECTNLGLAAVAERCKLLRKLHIDGWKANRI 336 (529)
Q Consensus 257 ~~~~~~l~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~L~~L~L~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~i 336 (529)
. ........+++++.+.+.++.++... ....+++|++|++.++ .+++.+ . ...+++|+.|+++++....+
T Consensus 187 ~----~~~~~~~~l~~~~~l~l~~n~i~~~~--~~~~~~~L~~L~l~~n-~l~~~~--~-l~~l~~L~~L~l~~n~l~~~ 256 (384)
T d2omza2 187 V----SDISVLAKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGN-QLKDIG--T-LASLTNLTDLDLANNQISNL 256 (384)
T ss_dssp C----CCCGGGGGCTTCSEEECCSSCCCCCG--GGGGCTTCCEEECCSS-CCCCCG--G-GGGCTTCSEEECCSSCCCCC
T ss_pred c----ccccccccccccceeeccCCccCCCC--cccccCCCCEEECCCC-CCCCcc--h-hhcccccchhccccCccCCC
Confidence 0 01122346678999999998777643 3456889999999988 344432 2 24579999999998765444
Q ss_pred ChHHHHHHHhcCccccceEeecccCcHHHHHHHHhcCCCCCEEEccCCCCCChhHHHHHHHcCCcCCEEEeccCCCCHHH
Q 009671 337 GDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSDTVGDVEISCIAAKCVALKKLCIKSCPVSDHG 416 (529)
Q Consensus 337 ~~~~l~~~~~~~~~L~~L~L~~~~i~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~l~~l~~~~~~L~~L~l~~~~i~~~~ 416 (529)
.+ ...+++|++|+++++.+.... .+ ..++.++.+.+..+. +++. .. ...+++++.|++++|.+++.
T Consensus 257 ~~------~~~~~~L~~L~l~~~~l~~~~--~~-~~~~~l~~l~~~~n~-l~~~--~~-~~~~~~l~~L~ls~n~l~~l- 322 (384)
T d2omza2 257 AP------LSGLTKLTELKLGANQISNIS--PL-AGLTALTNLELNENQ-LEDI--SP-ISNLKNLTYLTLYFNNISDI- 322 (384)
T ss_dssp GG------GTTCTTCSEEECCSSCCCCCG--GG-TTCTTCSEEECCSSC-CSCC--GG-GGGCTTCSEEECCSSCCSCC-
T ss_pred Cc------ccccccCCEeeccCcccCCCC--cc-ccccccccccccccc-cccc--cc-cchhcccCeEECCCCCCCCC-
Confidence 32 346799999999999876532 22 678899999998775 3331 11 34589999999999998763
Q ss_pred HHHHHhcCCCccEEEeccCCCCCHHHHHHHHhcCCcEEEEeccCccccccccCCcccc
Q 009671 417 MEALAGGCPNLVKVKVKKCRAVTTEGADWLRARREYVVVNLDSGEAEHQDASDGGVQE 474 (529)
Q Consensus 417 l~~l~~~~~~L~~L~l~~c~~i~~~~~~~l~~~~~~l~l~l~~~~~~~ld~~~~~~~~ 474 (529)
..+ ..+++|++|++++|. +++ +..+.. .+.++.+++++|.+.+
T Consensus 323 -~~l-~~l~~L~~L~L~~n~-l~~--l~~l~~----------l~~L~~L~l~~N~l~~ 365 (384)
T d2omza2 323 -SPV-SSLTKLQRLFFANNK-VSD--VSSLAN----------LTNINWLSAGHNQISD 365 (384)
T ss_dssp -GGG-GGCTTCCEEECCSSC-CCC--CGGGGG----------CTTCCEEECCSSCCCB
T ss_pred -ccc-ccCCCCCEEECCCCC-CCC--ChhHcC----------CCCCCEEECCCCcCCC
Confidence 233 479999999999996 765 222221 2457778888888764
No 9
>d1fs1a1 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.21 E-value=3.8e-12 Score=77.70 Aligned_cols=36 Identities=39% Similarity=0.683 Sum_probs=33.8
Q ss_pred ccCCCHHHHHHHHccCChhhhhHHHHHhHHHHHhhc
Q 009671 51 ISNLPDECLACIFQSLSSGDRKRCSLVCRRWLRIEG 86 (529)
Q Consensus 51 ~~~LP~eil~~If~~L~~~d~~~~~~Vck~W~~~~~ 86 (529)
|+.||+||+.+||+||+++|++++++|||+|++++.
T Consensus 1 f~~LP~eil~~If~~L~~~dl~~~~~Vcr~w~~l~~ 36 (41)
T d1fs1a1 1 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLAS 36 (41)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHT
T ss_pred CCcCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC
Confidence 578999999999999999999999999999999854
No 10
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.12 E-value=1.6e-11 Score=114.48 Aligned_cols=132 Identities=19% Similarity=0.155 Sum_probs=63.2
Q ss_pred hcCCCCCeEEecCCCCCChhhHHHHHHhCCCCcEEEecCcccCccChHHHHHHHhcCccccceEeecccCcHHHHHHHHh
Q 009671 292 SNCLDLEIMHLVKTPECTNLGLAAVAERCKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLAS 371 (529)
Q Consensus 292 ~~~~~L~~L~L~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~i~~~~l~~~~~~~~~L~~L~L~~~~i~~~~l~~l~~ 371 (529)
..+++|+.+++.++. +.... ...+++|++|+++++........ ....++.++.|++++|.+.......+ .
T Consensus 147 ~~l~~L~~l~l~~n~-l~~l~----~~~~~~L~~L~l~~n~~~~~~~~----~~~~~~~l~~L~~s~n~l~~~~~~~~-~ 216 (305)
T d1xkua_ 147 QGMKKLSYIRIADTN-ITTIP----QGLPPSLTELHLDGNKITKVDAA----SLKGLNNLAKLGLSFNSISAVDNGSL-A 216 (305)
T ss_dssp GGCTTCCEEECCSSC-CCSCC----SSCCTTCSEEECTTSCCCEECTG----GGTTCTTCCEEECCSSCCCEECTTTG-G
T ss_pred ccccccCccccccCC-ccccC----cccCCccCEEECCCCcCCCCChh----Hhhccccccccccccccccccccccc-c
Confidence 345556666665542 11110 01135566666655433222221 12345566666666665554333222 4
Q ss_pred cCCCCCEEEccCCCCCChhHHHHHHHcCCcCCEEEeccCCCCHHHHHHH-----HhcCCCccEEEeccCC
Q 009671 372 NCQNLERLALCGSDTVGDVEISCIAAKCVALKKLCIKSCPVSDHGMEAL-----AGGCPNLVKVKVKKCR 436 (529)
Q Consensus 372 ~~~~L~~L~l~~~~~~~~~~l~~l~~~~~~L~~L~l~~~~i~~~~l~~l-----~~~~~~L~~L~l~~c~ 436 (529)
.+++|++|++++|. ++.. ..-...+++|++|+|++|+|+.-+-..+ ....++|+.|++.+++
T Consensus 217 ~l~~L~~L~L~~N~-L~~l--p~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~ 283 (305)
T d1xkua_ 217 NTPHLRELHLNNNK-LVKV--PGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNP 283 (305)
T ss_dssp GSTTCCEEECCSSC-CSSC--CTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSS
T ss_pred ccccceeeeccccc-cccc--ccccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCc
Confidence 56666777766663 2211 1112235667777777766543211111 1124567777777666
No 11
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.07 E-value=7.2e-10 Score=98.01 Aligned_cols=123 Identities=21% Similarity=0.203 Sum_probs=62.8
Q ss_pred hhcCCCCCeEEecCCCCCChhhHHHHHHhCCCCcEEEecCcccCccChHHHHHHHhcCccccceEeecccCcHHHHHHHH
Q 009671 291 ISNCLDLEIMHLVKTPECTNLGLAAVAERCKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLA 370 (529)
Q Consensus 291 l~~~~~L~~L~L~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~i~~~~l~~~~~~~~~L~~L~L~~~~i~~~~l~~l~ 370 (529)
+..+++|+.+.++++....... + ...+.++.+.++++....... ...+++|++|+++++.+.+.. .+
T Consensus 103 l~~l~~L~~l~l~~~~~~~~~~---~-~~~~~~~~l~~~~~~~~~~~~------~~~~~~L~~L~l~~n~~~~~~--~l- 169 (227)
T d1h6ua2 103 IAGLQSIKTLDLTSTQITDVTP---L-AGLSNLQVLYLDLNQITNISP------LAGLTNLQYLSIGNAQVSDLT--PL- 169 (227)
T ss_dssp GTTCTTCCEEECTTSCCCCCGG---G-TTCTTCCEEECCSSCCCCCGG------GGGCTTCCEEECCSSCCCCCG--GG-
T ss_pred ccccccccccccccccccccch---h-ccccchhhhhchhhhhchhhh------hccccccccccccccccccch--hh-
Confidence 3445556666665543211111 1 124556666665443211110 124566666666666554321 12
Q ss_pred hcCCCCCEEEccCCCCCChhHHHHHHHcCCcCCEEEeccCCCCHHHHHHHHhcCCCccEEEec
Q 009671 371 SNCQNLERLALCGSDTVGDVEISCIAAKCVALKKLCIKSCPVSDHGMEALAGGCPNLVKVKVK 433 (529)
Q Consensus 371 ~~~~~L~~L~l~~~~~~~~~~l~~l~~~~~~L~~L~l~~~~i~~~~l~~l~~~~~~L~~L~l~ 433 (529)
..+++|++|++++|. +++- .. ..++++|++|+|++|++++. ..+ ..+++|+.|+++
T Consensus 170 ~~l~~L~~L~Ls~n~-l~~l--~~-l~~l~~L~~L~Ls~N~lt~i--~~l-~~l~~L~~L~ls 225 (227)
T d1h6ua2 170 ANLSKLTTLKADDNK-ISDI--SP-LASLPNLIEVHLKNNQISDV--SPL-ANTSNLFIVTLT 225 (227)
T ss_dssp TTCTTCCEEECCSSC-CCCC--GG-GGGCTTCCEEECTTSCCCBC--GGG-TTCTTCCEEEEE
T ss_pred cccccceecccCCCc-cCCC--hh-hcCCCCCCEEECcCCcCCCC--ccc-ccCCCCCEEEee
Confidence 556677777776663 4432 11 23467777777777776642 222 357777777765
No 12
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.03 E-value=1.6e-09 Score=95.64 Aligned_cols=185 Identities=19% Similarity=0.191 Sum_probs=99.0
Q ss_pred CCccEEecCCCCCCCHHHHHHHHhcCCCCCEEEecCcccChHHHHHHHhcCCCCCEEecCCccCCCccccccccCCCccc
Q 009671 141 RNLTRLKLRACRELTDAGMSVFAKNCKGLKKLSCGSCTFGAKGMNAVLDNCSTLEELSVKRLRGITDGAAAEPIGPGVAA 220 (529)
Q Consensus 141 ~~L~~L~L~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~ 220 (529)
.+|+.|++.+| .+++ +.. ...+++|++|++++|.+.... . +..+++|+.+++.++. ++. +
T Consensus 41 ~~L~~L~l~~~-~i~~--l~~-l~~l~~L~~L~ls~n~i~~~~--~-l~~l~~l~~l~~~~n~-~~~--i---------- 100 (227)
T d1h6ua2 41 DGITTLSAFGT-GVTT--IEG-VQYLNNLIGLELKDNQITDLA--P-LKNLTKITELELSGNP-LKN--V---------- 100 (227)
T ss_dssp HTCCEEECTTS-CCCC--CTT-GGGCTTCCEEECCSSCCCCCG--G-GTTCCSCCEEECCSCC-CSC--C----------
T ss_pred CCcCEEECCCC-CCCc--chh-HhcCCCCcEeecCCceeeccc--c-cccccccccccccccc-ccc--c----------
Confidence 46777777765 3432 122 235777777777777654321 1 3466777777776552 211 0
Q ss_pred CccchhhccccccCCcchhhhhcCCCCCeEeccccCCCchHHHHHHHhhcCCccEEEeeccccChHHHHHhhcCCCCCeE
Q 009671 221 SSLKTVCLKELYNGQCFGPLIIGAKNLRTLKLFRCSGDWDKLLQLVTDRVTSLVEIHLERIQVTDVGLAAISNCLDLEIM 300 (529)
Q Consensus 221 ~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~l~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~L~~L 300 (529)
..+..+++|+.+.+.++....... ....+.++.+.+..+.+.... .+..+++|+.|
T Consensus 101 ------------------~~l~~l~~L~~l~l~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L 156 (227)
T d1h6ua2 101 ------------------SAIAGLQSIKTLDLTSTQITDVTP----LAGLSNLQVLYLDLNQITNIS--PLAGLTNLQYL 156 (227)
T ss_dssp ------------------GGGTTCTTCCEEECTTSCCCCCGG----GTTCTTCCEEECCSSCCCCCG--GGGGCTTCCEE
T ss_pred ------------------ccccccccccccccccccccccch----hccccchhhhhchhhhhchhh--hhccccccccc
Confidence 012345566666665554222111 123345666666555443321 23456677777
Q ss_pred EecCCCCCChhhHHHHHHhCCCCcEEEecCcccCccChHHHHHHHhcCccccceEeecccCcHHHHHHHHhcCCCCCEEE
Q 009671 301 HLVKTPECTNLGLAAVAERCKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERLA 380 (529)
Q Consensus 301 ~L~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~i~~~~l~~~~~~~~~L~~L~L~~~~i~~~~l~~l~~~~~~L~~L~ 380 (529)
++.++......+ ...+++|+.|++++|....+.+ ...+++|++|++++|++++.. .+ ..+++|+.|+
T Consensus 157 ~l~~n~~~~~~~----l~~l~~L~~L~Ls~n~l~~l~~------l~~l~~L~~L~Ls~N~lt~i~--~l-~~l~~L~~L~ 223 (227)
T d1h6ua2 157 SIGNAQVSDLTP----LANLSKLTTLKADDNKISDISP------LASLPNLIEVHLKNNQISDVS--PL-ANTSNLFIVT 223 (227)
T ss_dssp ECCSSCCCCCGG----GTTCTTCCEEECCSSCCCCCGG------GGGCTTCCEEECTTSCCCBCG--GG-TTCTTCCEEE
T ss_pred cccccccccchh----hcccccceecccCCCccCCChh------hcCCCCCCEEECcCCcCCCCc--cc-ccCCCCCEEE
Confidence 776653211111 2346777777777664433321 245677777777777766532 22 5777777777
Q ss_pred cc
Q 009671 381 LC 382 (529)
Q Consensus 381 l~ 382 (529)
++
T Consensus 224 ls 225 (227)
T d1h6ua2 224 LT 225 (227)
T ss_dssp EE
T ss_pred ee
Confidence 64
No 13
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.03 E-value=4e-11 Score=110.32 Aligned_cols=61 Identities=20% Similarity=0.191 Sum_probs=26.8
Q ss_pred CccccceEeecccCcHHHHHHHHhcCCCCCEEEccCCCCCChhHHHHHHHcCCcCCEEEeccCC
Q 009671 348 CPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSDTVGDVEISCIAAKCVALKKLCIKSCP 411 (529)
Q Consensus 348 ~~~L~~L~L~~~~i~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~l~~l~~~~~~L~~L~l~~~~ 411 (529)
+++|+.+++++|.++......+ ..+++|++|+++++. ++.... .....+++|++|++++|+
T Consensus 176 l~~L~~l~l~~N~l~~i~~~~f-~~l~~L~~L~l~~N~-i~~~~~-~~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 176 LHSLDRLLLHQNRVAHVHPHAF-RDLGRLMTLYLFANN-LSALPT-EALAPLRALQYLRLNDNP 236 (284)
T ss_dssp CTTCCEEECCSSCCCEECTTTT-TTCTTCCEEECCSSC-CSCCCH-HHHTTCTTCCEEECCSSC
T ss_pred ccccchhhhhhccccccChhHh-hhhhhcccccccccc-cccccc-cccccccccCEEEecCCC
Confidence 4455555555554443222222 444555555555543 222111 112235555666665554
No 14
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.02 E-value=5.2e-10 Score=97.54 Aligned_cols=165 Identities=20% Similarity=0.244 Sum_probs=108.4
Q ss_pred CCCCCeEeccccCCCchHHHHHHHhhcCCccEEEeeccccChHHHHHhhcCCCCCeEEecCCCCCChhhHHHHHHhCCCC
Q 009671 244 AKNLRTLKLFRCSGDWDKLLQLVTDRVTSLVEIHLERIQVTDVGLAAISNCLDLEIMHLVKTPECTNLGLAAVAERCKLL 323 (529)
Q Consensus 244 ~~~L~~L~l~~~~~~~~~~l~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~L~~L~L~~~~~~~~~~l~~l~~~~~~L 323 (529)
+.+|++|++.+|.-..-.+ .+.+++|++|++++|.+++.. .++.+++|+.|+++++ .+++.. . ...+++|
T Consensus 45 L~~L~~L~l~~~~i~~l~~----l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n-~i~~l~--~-l~~l~~L 114 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSVQG----IQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDEN-KVKDLS--S-LKDLKKL 114 (210)
T ss_dssp HHTCCEEECTTSCCCCCTT----GGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSS-CCCCGG--G-GTTCTTC
T ss_pred hcCccEEECcCCCCCCchh----HhhCCCCCEEeCCCccccCcc--ccccCccccccccccc-cccccc--c-ccccccc
Confidence 4567777777764221111 245778888888888777643 3566788888888877 444322 2 2346888
Q ss_pred cEEEecCcccCccChHHHHHHHhcCccccceEeecccCcHHHHHHHHhcCCCCCEEEccCCCCCChhHHHHHHHcCCcCC
Q 009671 324 RKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSDTVGDVEISCIAAKCVALK 403 (529)
Q Consensus 324 ~~L~L~~~~~~~i~~~~l~~~~~~~~~L~~L~L~~~~i~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~l~~l~~~~~~L~ 403 (529)
+.|+++++....+. ....+++++.++++++.+++.. . ...+++|+.++++++. +++. .. ..++++|+
T Consensus 115 ~~L~l~~~~~~~~~------~l~~l~~l~~l~~~~n~l~~~~--~-~~~l~~L~~l~l~~n~-l~~i--~~-l~~l~~L~ 181 (210)
T d1h6ta2 115 KSLSLEHNGISDIN------GLVHLPQLESLYLGNNKITDIT--V-LSRLTKLDTLSLEDNQ-ISDI--VP-LAGLTKLQ 181 (210)
T ss_dssp CEEECTTSCCCCCG------GGGGCTTCCEEECCSSCCCCCG--G-GGGCTTCSEEECCSSC-CCCC--GG-GTTCTTCC
T ss_pred cccccccccccccc------cccccccccccccccccccccc--c-cccccccccccccccc-cccc--cc-ccCCCCCC
Confidence 88888876543332 1345778888888888776533 1 2567889999988875 4432 12 23578899
Q ss_pred EEEeccCCCCHHHHHHHHhcCCCccEEEecc
Q 009671 404 KLCIKSCPVSDHGMEALAGGCPNLVKVKVKK 434 (529)
Q Consensus 404 ~L~l~~~~i~~~~l~~l~~~~~~L~~L~l~~ 434 (529)
+|++++|.+++ +..+. .+++|+.|+|++
T Consensus 182 ~L~Ls~N~i~~--l~~l~-~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 182 NLYLSKNHISD--LRALA-GLKNLDVLELFS 209 (210)
T ss_dssp EEECCSSCCCB--CGGGT-TCTTCSEEEEEE
T ss_pred EEECCCCCCCC--Chhhc-CCCCCCEEEccC
Confidence 99999888875 33443 688899988864
No 15
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.01 E-value=1.5e-11 Score=113.18 Aligned_cols=187 Identities=20% Similarity=0.145 Sum_probs=122.8
Q ss_pred hhhcCCCCCeEeccccCCCchHHHHHHHhhcCCccEEEeec-cccChHHHHHhhcCCCCCeEEecCCCCCChhhHHHHHH
Q 009671 240 LIIGAKNLRTLKLFRCSGDWDKLLQLVTDRVTSLVEIHLER-IQVTDVGLAAISNCLDLEIMHLVKTPECTNLGLAAVAE 318 (529)
Q Consensus 240 ~~~~~~~L~~L~l~~~~~~~~~~l~~l~~~~~~L~~L~l~~-~~l~~~~~~~l~~~~~L~~L~L~~~~~~~~~~l~~l~~ 318 (529)
.+..+++|++|+++++.- ... ........+.++.+.+.. +.++......+..+++|+.|+++++.. ..... ....
T Consensus 51 ~f~~l~~L~~L~ls~n~l-~~i-~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~-~~~~~-~~~~ 126 (284)
T d1ozna_ 51 SFRACRNLTILWLHSNVL-ARI-DAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGL-QELGP-GLFR 126 (284)
T ss_dssp TTTTCTTCCEEECCSSCC-CEE-CTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCC-CCCCT-TTTT
T ss_pred Hhhccccccccccccccc-ccc-ccccccccccccccccccccccccccchhhcccccCCEEecCCccc-ccccc-cccc
Confidence 346677888888876531 110 111223445677776654 355555455567788999999988742 22111 1223
Q ss_pred hCCCCcEEEecCcccCccChHHHHHHHhcCccccceEeecccCcHHHHHHHHhcCCCCCEEEccCCCCCChhHHHHHHHc
Q 009671 319 RCKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSDTVGDVEISCIAAK 398 (529)
Q Consensus 319 ~~~~L~~L~L~~~~~~~i~~~~l~~~~~~~~~L~~L~L~~~~i~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~l~~l~~~ 398 (529)
..++|+.++++++....+.+.. ...+++|+.|++++|.+......++ ..+++|+.+.+.++. ++... .....+
T Consensus 127 ~~~~L~~l~l~~N~l~~i~~~~----f~~~~~L~~L~l~~N~l~~l~~~~f-~~l~~L~~l~l~~N~-l~~i~-~~~f~~ 199 (284)
T d1ozna_ 127 GLAALQYLYLQDNALQALPDDT----FRDLGNLTHLFLHGNRISSVPERAF-RGLHSLDRLLLHQNR-VAHVH-PHAFRD 199 (284)
T ss_dssp TCTTCCEEECCSSCCCCCCTTT----TTTCTTCCEEECCSSCCCEECTTTT-TTCTTCCEEECCSSC-CCEEC-TTTTTT
T ss_pred hhcccchhhhccccccccChhH----hccccchhhcccccCcccccchhhh-ccccccchhhhhhcc-ccccC-hhHhhh
Confidence 3678999999987666665432 3467899999999998875443334 688999999999875 33222 122345
Q ss_pred CCcCCEEEeccCCCCHHHHHHHHhcCCCccEEEeccCCCC
Q 009671 399 CVALKKLCIKSCPVSDHGMEALAGGCPNLVKVKVKKCRAV 438 (529)
Q Consensus 399 ~~~L~~L~l~~~~i~~~~l~~l~~~~~~L~~L~l~~c~~i 438 (529)
+++|+.|++++|.+.......+. .+++|+.|++.+++..
T Consensus 200 l~~L~~L~l~~N~i~~~~~~~~~-~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 200 LGRLMTLYLFANNLSALPTEALA-PLRALQYLRLNDNPWV 238 (284)
T ss_dssp CTTCCEEECCSSCCSCCCHHHHT-TCTTCCEEECCSSCEE
T ss_pred hhhcccccccccccccccccccc-cccccCEEEecCCCCC
Confidence 78999999999997665444554 6899999999986633
No 16
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.01 E-value=2.4e-10 Score=106.22 Aligned_cols=226 Identities=16% Similarity=0.105 Sum_probs=144.9
Q ss_pred CCCCEEEecCcccChHHHHHHHhcCCCCCEEecCCccCCCccccccccCCCcccCccchhhccccccCCcchhhhhcCCC
Q 009671 167 KGLKKLSCGSCTFGAKGMNAVLDNCSTLEELSVKRLRGITDGAAAEPIGPGVAASSLKTVCLKELYNGQCFGPLIIGAKN 246 (529)
Q Consensus 167 ~~L~~L~L~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~ 246 (529)
+++++|+|++|.++.-. ...+..+++|++|++.++....- .+..+..+++
T Consensus 31 ~~l~~L~Ls~N~i~~l~-~~~f~~l~~L~~L~l~~n~~~~i-----------------------------~~~~f~~l~~ 80 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIK-DGDFKNLKNLHTLILINNKISKI-----------------------------SPGAFAPLVK 80 (305)
T ss_dssp TTCCEEECCSSCCCCBC-TTTTTTCTTCCEEECCSSCCCCB-----------------------------CTTTTTTCTT
T ss_pred CCCCEEECcCCcCCCcC-hhHhhcccccccccccccccccc-----------------------------chhhhhCCCc
Confidence 57999999998764211 01244678899998887632211 1123456788
Q ss_pred CCeEeccccCCCchHHHHHHHhhcCCccEEEeeccccChHHHHHhhcCCCCCeEEecCCCCCChhhHHHHHHhCCCCcEE
Q 009671 247 LRTLKLFRCSGDWDKLLQLVTDRVTSLVEIHLERIQVTDVGLAAISNCLDLEIMHLVKTPECTNLGLAAVAERCKLLRKL 326 (529)
Q Consensus 247 L~~L~l~~~~~~~~~~l~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~L~~L~L~~~~~~~~~~l~~l~~~~~~L~~L 326 (529)
|++|++.++. +..-. ....+.++.|.+..+.+.......+.....+..+....+..............+++|+.+
T Consensus 81 L~~L~l~~n~-l~~l~----~~~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l 155 (305)
T d1xkua_ 81 LERLYLSKNQ-LKELP----EKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYI 155 (305)
T ss_dssp CCEEECCSSC-CSBCC----SSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEE
T ss_pred cCEecccCCc-cCcCc----cchhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCcc
Confidence 8888888763 21100 123456888888888777665555666777888887765332222222233457889999
Q ss_pred EecCcccCccChHHHHHHHhcCccccceEeecccCcHHHHHHHHhcCCCCCEEEccCCCCCChhHHHHHHHcCCcCCEEE
Q 009671 327 HIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSDTVGDVEISCIAAKCVALKKLC 406 (529)
Q Consensus 327 ~L~~~~~~~i~~~~l~~~~~~~~~L~~L~L~~~~i~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~l~~l~~~~~~L~~L~ 406 (529)
+++++....+.. ..+++|++|+++++.........+ ..++.+++|.++++. ++.... ....++++|++|+
T Consensus 156 ~l~~n~l~~l~~-------~~~~~L~~L~l~~n~~~~~~~~~~-~~~~~l~~L~~s~n~-l~~~~~-~~~~~l~~L~~L~ 225 (305)
T d1xkua_ 156 RIADTNITTIPQ-------GLPPSLTELHLDGNKITKVDAASL-KGLNNLAKLGLSFNS-ISAVDN-GSLANTPHLRELH 225 (305)
T ss_dssp ECCSSCCCSCCS-------SCCTTCSEEECTTSCCCEECTGGG-TTCTTCCEEECCSSC-CCEECT-TTGGGSTTCCEEE
T ss_pred ccccCCccccCc-------ccCCccCEEECCCCcCCCCChhHh-hcccccccccccccc-cccccc-ccccccccceeee
Confidence 998875444332 135789999999887665544444 678889999998874 433222 1224588999999
Q ss_pred eccCCCCHHHHHHHHhcCCCccEEEeccCCCCCH
Q 009671 407 IKSCPVSDHGMEALAGGCPNLVKVKVKKCRAVTT 440 (529)
Q Consensus 407 l~~~~i~~~~l~~l~~~~~~L~~L~l~~c~~i~~ 440 (529)
|++|.++.. ...+. .+++|+.|+|++|. |+.
T Consensus 226 L~~N~L~~l-p~~l~-~l~~L~~L~Ls~N~-i~~ 256 (305)
T d1xkua_ 226 LNNNKLVKV-PGGLA-DHKYIQVVYLHNNN-ISA 256 (305)
T ss_dssp CCSSCCSSC-CTTTT-TCSSCCEEECCSSC-CCC
T ss_pred ccccccccc-ccccc-cccCCCEEECCCCc-cCc
Confidence 999986532 12333 58899999999986 664
No 17
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.01 E-value=5.4e-10 Score=96.52 Aligned_cols=162 Identities=23% Similarity=0.196 Sum_probs=100.8
Q ss_pred cCCCCCeEeccccCCCchHHHHHHHhhcCCccEEEeeccccChHHHHHhhcCCCCCeEEecCCCCCChhhHHHHHHhCCC
Q 009671 243 GAKNLRTLKLFRCSGDWDKLLQLVTDRVTSLVEIHLERIQVTDVGLAAISNCLDLEIMHLVKTPECTNLGLAAVAERCKL 322 (529)
Q Consensus 243 ~~~~L~~L~l~~~~~~~~~~l~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~L~~L~L~~~~~~~~~~l~~l~~~~~~ 322 (529)
.++++++|++.++.-..-.+ ...+++|+.|++++|.+++.. .+..+++|+.|+++++....-.+ ...+++
T Consensus 38 ~l~~l~~L~l~~~~i~~l~~----l~~l~nL~~L~Ls~N~l~~~~--~l~~l~~L~~L~l~~n~~~~~~~----l~~l~~ 107 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKSIDG----VEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITP----LANLTN 107 (199)
T ss_dssp HHTTCCEEECTTSCCCCCTT----GGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG----GTTCTT
T ss_pred HhcCCCEEECCCCCCCCccc----cccCCCcCcCccccccccCcc--cccCCcccccccccccccccccc----cccccc
Confidence 34677778777764211111 245677888888888776643 36678888888888764322121 234778
Q ss_pred CcEEEecCcccCccChHHHHHHHhcCccccceEeecccCcHHHHHHHHhcCCCCCEEEccCCCCCChhHHHHHHHcCCcC
Q 009671 323 LRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSDTVGDVEISCIAAKCVAL 402 (529)
Q Consensus 323 L~~L~L~~~~~~~i~~~~l~~~~~~~~~L~~L~L~~~~i~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~l~~l~~~~~~L 402 (529)
|+.|+++++....+. ....+++|+.|++++|.+.... .+ ..+++|+.|++.+|. +++-. . ..++++|
T Consensus 108 L~~L~l~~~~~~~~~------~~~~l~~L~~L~l~~n~l~~~~--~l-~~~~~L~~L~l~~n~-l~~l~--~-l~~l~~L 174 (199)
T d2omxa2 108 LTGLTLFNNQITDID------PLKNLTNLNRLELSSNTISDIS--AL-SGLTSLQQLNFSSNQ-VTDLK--P-LANLTTL 174 (199)
T ss_dssp CSEEECCSSCCCCCG------GGTTCTTCSEEECCSSCCCCCG--GG-TTCTTCSEEECCSSC-CCCCG--G-GTTCTTC
T ss_pred ccccccccccccccc------ccchhhhhHHhhhhhhhhcccc--cc-ccccccccccccccc-ccCCc--c-ccCCCCC
Confidence 888888776432221 1235778888888888765432 23 567888888887774 43321 1 2357888
Q ss_pred CEEEeccCCCCHHHHHHHHhcCCCccEE
Q 009671 403 KKLCIKSCPVSDHGMEALAGGCPNLVKV 430 (529)
Q Consensus 403 ~~L~l~~~~i~~~~l~~l~~~~~~L~~L 430 (529)
++|++++|++++- ..+. .+++|+.|
T Consensus 175 ~~L~ls~N~i~~i--~~l~-~L~~L~~L 199 (199)
T d2omxa2 175 ERLDISSNKVSDI--SVLA-KLTNLESL 199 (199)
T ss_dssp CEEECCSSCCCCC--GGGG-GCTTCSEE
T ss_pred CEEECCCCCCCCC--cccc-CCCCCCcC
Confidence 8888888887762 2333 57777765
No 18
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.92 E-value=5.1e-09 Score=90.19 Aligned_cols=51 Identities=22% Similarity=0.266 Sum_probs=24.1
Q ss_pred CCCCcEEEecCcccCccChHHHHHHHhcCccccceEeecccCcHHHHHHHHhcCCCCCEE
Q 009671 320 CKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERL 379 (529)
Q Consensus 320 ~~~L~~L~L~~~~~~~i~~~~l~~~~~~~~~L~~L~L~~~~i~~~~l~~l~~~~~~L~~L 379 (529)
+++|+.|++.+|....+.. ...+++|++|++++|.+++.. .+ ..+++|++|
T Consensus 149 ~~~L~~L~l~~n~l~~l~~------l~~l~~L~~L~ls~N~i~~i~--~l-~~L~~L~~L 199 (199)
T d2omxa2 149 LTSLQQLNFSSNQVTDLKP------LANLTTLERLDISSNKVSDIS--VL-AKLTNLESL 199 (199)
T ss_dssp CTTCSEEECCSSCCCCCGG------GTTCTTCCEEECCSSCCCCCG--GG-GGCTTCSEE
T ss_pred cccccccccccccccCCcc------ccCCCCCCEEECCCCCCCCCc--cc-cCCCCCCcC
Confidence 4555555555443222211 234556666666666555421 22 455555554
No 19
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.92 E-value=2.9e-09 Score=92.60 Aligned_cols=14 Identities=14% Similarity=0.102 Sum_probs=6.6
Q ss_pred CCCCCEEEecCccc
Q 009671 166 CKGLKKLSCGSCTF 179 (529)
Q Consensus 166 ~~~L~~L~L~~~~~ 179 (529)
+++|++|++++|.+
T Consensus 67 l~~L~~L~L~~n~i 80 (210)
T d1h6ta2 67 LPNVTKLFLNGNKL 80 (210)
T ss_dssp CTTCCEEECCSSCC
T ss_pred CCCCCEEeCCCccc
Confidence 44444444444443
No 20
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.80 E-value=1.3e-09 Score=90.22 Aligned_cols=82 Identities=18% Similarity=0.233 Sum_probs=39.8
Q ss_pred cCccccceEeecccCcHHHHHHHHhcCCCCCEEEccCCCCCCh-hHHHHHHHcCCcCCEEEeccCCCCHHH--HHHHHhc
Q 009671 347 CCPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSDTVGD-VEISCIAAKCVALKKLCIKSCPVSDHG--MEALAGG 423 (529)
Q Consensus 347 ~~~~L~~L~L~~~~i~~~~l~~l~~~~~~L~~L~l~~~~~~~~-~~l~~l~~~~~~L~~L~l~~~~i~~~~--l~~l~~~ 423 (529)
.+++|++|++++|.++..... +...+++|++|++++|. +++ ..+..+ ..+++|+.|++++|++++.. -..+...
T Consensus 61 ~l~~L~~L~ls~N~i~~l~~~-~~~~l~~L~~L~L~~N~-i~~~~~l~~l-~~l~~L~~L~l~~N~i~~~~~~r~~~i~~ 137 (162)
T d1a9na_ 61 LLRRLKTLLVNNNRICRIGEG-LDQALPDLTELILTNNS-LVELGDLDPL-ASLKSLTYLCILRNPVTNKKHYRLYVIYK 137 (162)
T ss_dssp CCSSCCEEECCSSCCCEECSC-HHHHCTTCCEEECCSCC-CCCGGGGGGG-GGCTTCCEEECCSSGGGGSTTHHHHHHHH
T ss_pred cCcchhhhhcccccccCCCcc-ccccccccccceecccc-cccccccccc-ccccccchhhcCCCccccccchHHHHHHH
Confidence 345555566655555432211 11445666666666553 322 122222 34666666666666643321 1122335
Q ss_pred CCCccEEE
Q 009671 424 CPNLVKVK 431 (529)
Q Consensus 424 ~~~L~~L~ 431 (529)
+|+|+.|+
T Consensus 138 lp~L~~LD 145 (162)
T d1a9na_ 138 VPQVRVLD 145 (162)
T ss_dssp CTTCSEET
T ss_pred CCCcCeeC
Confidence 67777665
No 21
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.76 E-value=6e-10 Score=101.13 Aligned_cols=110 Identities=15% Similarity=0.122 Sum_probs=55.2
Q ss_pred CCCCcEEEecCcccCccChHHHHHHHhcCccccceEeecccCcHHHHHHHHhcCCCCCEEEccCCCCCChhHHHHHHHcC
Q 009671 320 CKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSDTVGDVEISCIAAKC 399 (529)
Q Consensus 320 ~~~L~~L~L~~~~~~~i~~~~l~~~~~~~~~L~~L~L~~~~i~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~l~~l~~~~ 399 (529)
+++|+.|+++++....+.... ...+++++.|++.++.+.......+ ..+++|+.|+++++. ++...... ...+
T Consensus 99 l~~L~~L~l~~~~~~~~~~~~----~~~l~~l~~L~l~~n~l~~l~~~~~-~~l~~l~~l~l~~N~-l~~~~~~~-~~~l 171 (266)
T d1p9ag_ 99 LPALTVLDVSFNRLTSLPLGA----LRGLGELQELYLKGNELKTLPPGLL-TPTPKLEKLSLANNN-LTELPAGL-LNGL 171 (266)
T ss_dssp CTTCCEEECCSSCCCCCCSST----TTTCTTCCEEECTTSCCCCCCTTTT-TTCTTCCEEECTTSC-CSCCCTTT-TTTC
T ss_pred ccccccccccccccceeeccc----cccccccccccccccccceeccccc-cccccchhccccccc-ccccCccc-cccc
Confidence 455666666554333222211 1234566666666665543222211 455667777776653 32211111 1246
Q ss_pred CcCCEEEeccCCCCHHHHHHHHhcCCCccEEEeccCCCC
Q 009671 400 VALKKLCIKSCPVSDHGMEALAGGCPNLVKVKVKKCRAV 438 (529)
Q Consensus 400 ~~L~~L~l~~~~i~~~~l~~l~~~~~~L~~L~l~~c~~i 438 (529)
++|++|+|++|.++.- ...+. .+++|+.|+|.+++..
T Consensus 172 ~~L~~L~Ls~N~L~~l-p~~~~-~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 172 ENLDTLLLQENSLYTI-PKGFF-GSHLLPFAFLHGNPWL 208 (266)
T ss_dssp TTCCEEECCSSCCCCC-CTTTT-TTCCCSEEECCSCCBC
T ss_pred cccceeecccCCCccc-ChhHC-CCCCCCEEEecCCCCC
Confidence 6777777777775521 11222 3667777777776643
No 22
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=98.76 E-value=1.7e-10 Score=107.63 Aligned_cols=227 Identities=12% Similarity=0.046 Sum_probs=123.3
Q ss_pred CCCEEEecCcccChH-HHHHHHhcCCCCCEEecCCccCCCccccccccCCCcccCccchhhccccccCCcchhhhhcCCC
Q 009671 168 GLKKLSCGSCTFGAK-GMNAVLDNCSTLEELSVKRLRGITDGAAAEPIGPGVAASSLKTVCLKELYNGQCFGPLIIGAKN 246 (529)
Q Consensus 168 ~L~~L~L~~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~ 246 (529)
++++|+|+++.+... .+..-+..+++|++|+|+++..+.. .++..+..+++
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g----------------------------~iP~~i~~L~~ 102 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVG----------------------------PIPPAIAKLTQ 102 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEES----------------------------CCCGGGGGCTT
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCcccccccccccccccc----------------------------ccccccccccc
Confidence 578888888765321 2333355778888888875433221 12334466777
Q ss_pred CCeEeccccCCCchHHHHHHHhhcCCccEEEeeccccChHHHHHhhcCCCCCeEEecCCCCCChhhHHHHHHhCCC-CcE
Q 009671 247 LRTLKLFRCSGDWDKLLQLVTDRVTSLVEIHLERIQVTDVGLAAISNCLDLEIMHLVKTPECTNLGLAAVAERCKL-LRK 325 (529)
Q Consensus 247 L~~L~l~~~~~~~~~~l~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~L~~L~L~~~~~~~~~~l~~l~~~~~~-L~~ 325 (529)
|++|+++++.... .........+.|+.+++..|.+.......+..+++|+.++++++.. ... +......+.. ++.
T Consensus 103 L~~L~Ls~N~l~~--~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l-~~~-ip~~~~~l~~l~~~ 178 (313)
T d1ogqa_ 103 LHYLYITHTNVSG--AIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRI-SGA-IPDSYGSFSKLFTS 178 (313)
T ss_dssp CSEEEEEEECCEE--ECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCC-EEE-CCGGGGCCCTTCCE
T ss_pred cchhhhccccccc--cccccccchhhhcccccccccccccCchhhccCcccceeecccccc-ccc-cccccccccccccc
Confidence 7777777653211 0111233456677777777655444344566777888888877632 111 1111122333 466
Q ss_pred EEecCcccCccChHHHHHHHhcCccccceEeecccCcHHHHHHHHhcCCCCCEEEccCCCCCChhHHHHHHHcCCcCCEE
Q 009671 326 LHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSDTVGDVEISCIAAKCVALKKL 405 (529)
Q Consensus 326 L~L~~~~~~~i~~~~l~~~~~~~~~L~~L~L~~~~i~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~l~~l~~~~~~L~~L 405 (529)
+.++.+.........+ .. ..+..+++..+........ ....++.|+.+++.++..... +.. ...+++|+.|
T Consensus 179 l~~~~n~l~~~~~~~~----~~-l~~~~l~l~~~~~~~~~~~-~~~~~~~l~~l~~~~~~l~~~--~~~-~~~~~~L~~L 249 (313)
T d1ogqa_ 179 MTISRNRLTGKIPPTF----AN-LNLAFVDLSRNMLEGDASV-LFGSDKNTQKIHLAKNSLAFD--LGK-VGLSKNLNGL 249 (313)
T ss_dssp EECCSSEEEEECCGGG----GG-CCCSEEECCSSEEEECCGG-GCCTTSCCSEEECCSSEECCB--GGG-CCCCTTCCEE
T ss_pred cccccccccccccccc----cc-ccccccccccccccccccc-ccccccccccccccccccccc--ccc-cccccccccc
Confidence 7776654332222111 11 2334566655543322111 124667788888877642111 111 1236788888
Q ss_pred EeccCCCCHHHHHHHHhcCCCccEEEeccCC
Q 009671 406 CIKSCPVSDHGMEALAGGCPNLVKVKVKKCR 436 (529)
Q Consensus 406 ~l~~~~i~~~~l~~l~~~~~~L~~L~l~~c~ 436 (529)
++++|.+++.....+. .+++|++|+|+++.
T Consensus 250 ~Ls~N~l~g~iP~~l~-~L~~L~~L~Ls~N~ 279 (313)
T d1ogqa_ 250 DLRNNRIYGTLPQGLT-QLKFLHSLNVSFNN 279 (313)
T ss_dssp ECCSSCCEECCCGGGG-GCTTCCEEECCSSE
T ss_pred cCccCeecccCChHHh-CCCCCCEEECcCCc
Confidence 8888887654334444 57888888888876
No 23
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.74 E-value=1.6e-09 Score=98.14 Aligned_cols=60 Identities=17% Similarity=0.085 Sum_probs=27.0
Q ss_pred CCCCcEEEecCcccCccChHHHHHHHhcCccccceEeecccCcHHHHHHHHhcCCCCCEEEccCCC
Q 009671 320 CKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSD 385 (529)
Q Consensus 320 ~~~L~~L~L~~~~~~~i~~~~l~~~~~~~~~L~~L~L~~~~i~~~~l~~l~~~~~~L~~L~l~~~~ 385 (529)
+++|+.+++++|....+.... ...+++|++|+|++|.++... ..+ ..+++|+.|+|++++
T Consensus 147 l~~l~~l~l~~N~l~~~~~~~----~~~l~~L~~L~Ls~N~L~~lp-~~~-~~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 147 TPKLEKLSLANNNLTELPAGL----LNGLENLDTLLLQENSLYTIP-KGF-FGSHLLPFAFLHGNP 206 (266)
T ss_dssp CTTCCEEECTTSCCSCCCTTT----TTTCTTCCEEECCSSCCCCCC-TTT-TTTCCCSEEECCSCC
T ss_pred cccchhcccccccccccCccc----cccccccceeecccCCCcccC-hhH-CCCCCCCEEEecCCC
Confidence 345555555554433332211 123455555555555544211 111 234556666666554
No 24
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=98.73 E-value=9.2e-08 Score=79.33 Aligned_cols=120 Identities=9% Similarity=0.126 Sum_probs=65.4
Q ss_pred HHHHHHhCCCCcEEEecCcccCccChHHHHHHHh---cCccccceEeecccCcHHHHHHH---HhcCCCCCEEEccCCCC
Q 009671 313 LAAVAERCKLLRKLHIDGWKANRIGDEGLIAVAK---CCPNLQELVLIGVNPTRVSLEVL---ASNCQNLERLALCGSDT 386 (529)
Q Consensus 313 l~~l~~~~~~L~~L~L~~~~~~~i~~~~l~~~~~---~~~~L~~L~L~~~~i~~~~l~~l---~~~~~~L~~L~l~~~~~ 386 (529)
+..+....++|++|+|+++ ..++++++..++. ..++|++|+|++|.+.+.+...+ +...+.|++|++++| .
T Consensus 7 l~~l~~n~~~L~~L~L~~~--~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n-~ 83 (167)
T d1pgva_ 7 INRLREDDTDLKEVNINNM--KRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESN-F 83 (167)
T ss_dssp HHHHHTTCSSCCEEECTTC--CSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSS-B
T ss_pred HHHHHhCCCCCcEEEeCCC--CCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehh-h
Confidence 4444444566666666543 2455555544433 23556666666666665544333 234566666666666 3
Q ss_pred CChhHHHHHHHcC---CcCCEEEeccCC---CCHHHHHHHHh---cCCCccEEEeccC
Q 009671 387 VGDVEISCIAAKC---VALKKLCIKSCP---VSDHGMEALAG---GCPNLVKVKVKKC 435 (529)
Q Consensus 387 ~~~~~l~~l~~~~---~~L~~L~l~~~~---i~~~~l~~l~~---~~~~L~~L~l~~c 435 (529)
+++.++..++..+ +.|++|+++++. +++++...+++ ..+.|+.|++.++
T Consensus 84 i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 84 LTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFA 141 (167)
T ss_dssp CCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCC
T ss_pred cchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCC
Confidence 6666665555443 457777776653 55555443332 3566777766554
No 25
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=98.73 E-value=1.9e-10 Score=107.39 Aligned_cols=18 Identities=22% Similarity=0.132 Sum_probs=10.2
Q ss_pred hhhhhcCCCCCeEecccc
Q 009671 238 GPLIIGAKNLRTLKLFRC 255 (529)
Q Consensus 238 ~~~~~~~~~L~~L~l~~~ 255 (529)
+..+..++.|+.++++++
T Consensus 142 p~~l~~l~~L~~l~l~~n 159 (313)
T d1ogqa_ 142 PPSISSLPNLVGITFDGN 159 (313)
T ss_dssp CGGGGGCTTCCEEECCSS
T ss_pred chhhccCcccceeecccc
Confidence 334455666666666654
No 26
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.71 E-value=7.3e-09 Score=85.66 Aligned_cols=88 Identities=20% Similarity=0.284 Sum_probs=40.7
Q ss_pred CCCCcEEEecCcccCccChHHHHHHHhcCccccceEeecccCcHHH-HHHHHhcCCCCCEEEccCCCCCCh-hHH-HHHH
Q 009671 320 CKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVS-LEVLASNCQNLERLALCGSDTVGD-VEI-SCIA 396 (529)
Q Consensus 320 ~~~L~~L~L~~~~~~~i~~~~l~~~~~~~~~L~~L~L~~~~i~~~~-l~~l~~~~~~L~~L~l~~~~~~~~-~~l-~~l~ 396 (529)
+++|++|++++|....+.+. +...+++|++|++++|.+.+.. +..+ ..+++|++|++.+|. +++ ... ..+.
T Consensus 62 l~~L~~L~ls~N~i~~l~~~----~~~~l~~L~~L~L~~N~i~~~~~l~~l-~~l~~L~~L~l~~N~-i~~~~~~r~~~i 135 (162)
T d1a9na_ 62 LRRLKTLLVNNNRICRIGEG----LDQALPDLTELILTNNSLVELGDLDPL-ASLKSLTYLCILRNP-VTNKKHYRLYVI 135 (162)
T ss_dssp CSSCCEEECCSSCCCEECSC----HHHHCTTCCEEECCSCCCCCGGGGGGG-GGCTTCCEEECCSSG-GGGSTTHHHHHH
T ss_pred CcchhhhhcccccccCCCcc----ccccccccccceecccccccccccccc-ccccccchhhcCCCc-cccccchHHHHH
Confidence 44555555555443333321 1223555566666555554321 2222 455666666666653 222 111 1233
Q ss_pred HcCCcCCEEEeccCCCCHH
Q 009671 397 AKCVALKKLCIKSCPVSDH 415 (529)
Q Consensus 397 ~~~~~L~~L~l~~~~i~~~ 415 (529)
..+|+|+.|| +.+|+.+
T Consensus 136 ~~lp~L~~LD--~~~i~~~ 152 (162)
T d1a9na_ 136 YKVPQVRVLD--FQKVKLK 152 (162)
T ss_dssp HHCTTCSEET--TEECCHH
T ss_pred HHCCCcCeeC--CCCCCHH
Confidence 4466666655 3345443
No 27
>d1nexb1 a.158.1.1 (B:270-369) Cdc4 F-box and linker domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.68 E-value=1.9e-09 Score=81.06 Aligned_cols=48 Identities=27% Similarity=0.294 Sum_probs=41.8
Q ss_pred CCcccCCCHHHHHHHHccCChhhhhHHHHHhHHHHHhh---cccceeeeec
Q 009671 48 YDYISNLPDECLACIFQSLSSGDRKRCSLVCRRWLRIE---GQSRHRLSLN 95 (529)
Q Consensus 48 ~~~~~~LP~eil~~If~~L~~~d~~~~~~Vck~W~~~~---~~~~~~~~l~ 95 (529)
.|++..||+||+.+||+||+++|++++++|||+|++++ ..+|+++.+.
T Consensus 3 ~D~~~~LP~Ell~~I~s~Ld~~dL~~~s~Vcr~W~~~~~~d~~LWr~l~~~ 53 (100)
T d1nexb1 3 RDLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLLIS 53 (100)
T ss_dssp CCHHHHSCHHHHHHHHTTSCHHHHHHHTTTCHHHHHHHHTCSHHHHHHHHH
T ss_pred CCchhhCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 58999999999999999999999999999999999864 2468776543
No 28
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=98.67 E-value=2.8e-07 Score=76.37 Aligned_cols=120 Identities=16% Similarity=0.159 Sum_probs=66.5
Q ss_pred HHHHHhCCCCcEEEecCcccCccChHHHHHHHh---cCccccceEeecccCcHHHHHHHH---hcCCCCCEEEccCCCCC
Q 009671 314 AAVAERCKLLRKLHIDGWKANRIGDEGLIAVAK---CCPNLQELVLIGVNPTRVSLEVLA---SNCQNLERLALCGSDTV 387 (529)
Q Consensus 314 ~~l~~~~~~L~~L~L~~~~~~~i~~~~l~~~~~---~~~~L~~L~L~~~~i~~~~l~~l~---~~~~~L~~L~l~~~~~~ 387 (529)
..+....++|++|+++++ ..+++.++..++. ..++|++|++++|.+++.+...++ ...+.++.+++.+|. +
T Consensus 10 ~~~~~~~~~L~~L~L~~~--~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~-~ 86 (166)
T d1io0a_ 10 KRIQNNDPDLEEVNLNNI--MNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNF-I 86 (166)
T ss_dssp HHHHTTCTTCCEEECTTC--TTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSC-C
T ss_pred HHHHhcCCCCcEEEcCCC--CCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccc-c
Confidence 334444566666666543 3455555555443 345666666666666665544432 345666666666553 5
Q ss_pred ChhHHHHHHHc---CCcCCEEEec--cCCCCHHHHHHHHh---cCCCccEEEeccCC
Q 009671 388 GDVEISCIAAK---CVALKKLCIK--SCPVSDHGMEALAG---GCPNLVKVKVKKCR 436 (529)
Q Consensus 388 ~~~~l~~l~~~---~~~L~~L~l~--~~~i~~~~l~~l~~---~~~~L~~L~l~~c~ 436 (529)
+++++..++.. .++|+.++|+ ++.+++.+...++. .++.|+.|++....
T Consensus 87 ~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 87 SGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp CHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred cchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCC
Confidence 66665555533 4556665554 34566666555443 46667777665543
No 29
>d2ovrb1 a.158.1.1 (B:2263-2364) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.62 E-value=9e-09 Score=77.76 Aligned_cols=47 Identities=23% Similarity=0.339 Sum_probs=41.1
Q ss_pred CCCCcccCCCHHHHHHHHccCChhhhhHHHHHhHHHHHhhc--ccceee
Q 009671 46 TAYDYISNLPDECLACIFQSLSSGDRKRCSLVCRRWLRIEG--QSRHRL 92 (529)
Q Consensus 46 ~~~~~~~~LP~eil~~If~~L~~~d~~~~~~Vck~W~~~~~--~~~~~~ 92 (529)
-..|++..||+||+.+||+||+++|++++++|||+|+.++. ..|+..
T Consensus 14 ~~~D~i~~LP~Eil~~Ils~Ld~~dL~~~~~vcr~w~~l~~~~~lW~~~ 62 (102)
T d2ovrb1 14 FQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREK 62 (102)
T ss_dssp CCCSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHH
T ss_pred hccCChhhCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 45699999999999999999999999999999999999854 346554
No 30
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=98.61 E-value=2.2e-07 Score=76.96 Aligned_cols=115 Identities=15% Similarity=0.127 Sum_probs=71.2
Q ss_pred CCCCCeEEecCCCCCChhhHHHHHH---hCCCCcEEEecCcccCccChHHHHHHH---hcCccccceEeecccCcHHHHH
Q 009671 294 CLDLEIMHLVKTPECTNLGLAAVAE---RCKLLRKLHIDGWKANRIGDEGLIAVA---KCCPNLQELVLIGVNPTRVSLE 367 (529)
Q Consensus 294 ~~~L~~L~L~~~~~~~~~~l~~l~~---~~~~L~~L~L~~~~~~~i~~~~l~~~~---~~~~~L~~L~L~~~~i~~~~l~ 367 (529)
.++|++|+|+++..+++.++..++. ..++|++|+|++| .+++.+...++ +..+.|++|+|++|.+++.++.
T Consensus 14 ~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n---~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~ 90 (167)
T d1pgva_ 14 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANT---AISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 90 (167)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTS---CCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred CCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeecccc---ccchhHHHHHhhhhhhcccccceeeehhhcchHHHH
Confidence 4666666666554566665555443 3356777777664 35555444333 3457777777777777777766
Q ss_pred HHHh---cCCCCCEEEccCCC--CCChhHHHHHH---HcCCcCCEEEeccCC
Q 009671 368 VLAS---NCQNLERLALCGSD--TVGDVEISCIA---AKCVALKKLCIKSCP 411 (529)
Q Consensus 368 ~l~~---~~~~L~~L~l~~~~--~~~~~~l~~l~---~~~~~L~~L~l~~~~ 411 (529)
.++. ..+.|++|+++++. .+++.+...++ ...+.|+.|+++++.
T Consensus 91 ~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 91 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCC
Confidence 6544 34568888887652 35555544433 446788888887764
No 31
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=98.58 E-value=6.6e-07 Score=74.01 Aligned_cols=116 Identities=23% Similarity=0.156 Sum_probs=71.0
Q ss_pred CCCCCeEEecCCCCCChhhHHHHHH---hCCCCcEEEecCcccCccChHHHHHHH---hcCccccceEeecccCcHHHHH
Q 009671 294 CLDLEIMHLVKTPECTNLGLAAVAE---RCKLLRKLHIDGWKANRIGDEGLIAVA---KCCPNLQELVLIGVNPTRVSLE 367 (529)
Q Consensus 294 ~~~L~~L~L~~~~~~~~~~l~~l~~---~~~~L~~L~L~~~~~~~i~~~~l~~~~---~~~~~L~~L~L~~~~i~~~~l~ 367 (529)
.++|++|++.+...+++.++..+.. ..++|++|+|++| .+++.++..++ ...+.++.++++++.+.+.++.
T Consensus 16 ~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n---~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~ 92 (166)
T d1io0a_ 16 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGT---RSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 92 (166)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTS---CCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred CCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCC---cccHHHHHHHHHHHhhcccchhhhhccccccchhHH
Confidence 4566666666554566666555443 3466777777664 35555544433 3456777777777777777665
Q ss_pred HHH---hcCCCCCEEEccCC-CCCChhHHHHHH---HcCCcCCEEEeccCCC
Q 009671 368 VLA---SNCQNLERLALCGS-DTVGDVEISCIA---AKCVALKKLCIKSCPV 412 (529)
Q Consensus 368 ~l~---~~~~~L~~L~l~~~-~~~~~~~l~~l~---~~~~~L~~L~l~~~~i 412 (529)
.+. ...+.|+.++|..+ ..+++.+...++ ..+++|++|+++.+..
T Consensus 93 ~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 93 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCC
Confidence 554 34566777777644 246776655554 3577888888877653
No 32
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.54 E-value=2.6e-08 Score=93.94 Aligned_cols=56 Identities=11% Similarity=0.070 Sum_probs=33.6
Q ss_pred CCcCCEEEeccCCCCHHHHHHHHhcCCCccEEEeccCCCCCHHHHHHHHhcCCcEEEEeccCccccccccCCcccc
Q 009671 399 CVALKKLCIKSCPVSDHGMEALAGGCPNLVKVKVKKCRAVTTEGADWLRARREYVVVNLDSGEAEHQDASDGGVQE 474 (529)
Q Consensus 399 ~~~L~~L~l~~~~i~~~~l~~l~~~~~~L~~L~l~~c~~i~~~~~~~l~~~~~~l~l~l~~~~~~~ld~~~~~~~~ 474 (529)
+++|++|+|++|.++. +...+++|+.|++.+|. +++- |. ....+..+++++|.+..
T Consensus 283 ~~~L~~L~Ls~N~l~~-----lp~~~~~L~~L~L~~N~-L~~l---------~~-----~~~~L~~L~L~~N~L~~ 338 (353)
T d1jl5a_ 283 PPSLEELNVSNNKLIE-----LPALPPRLERLIASFNH-LAEV---------PE-----LPQNLKQLHVEYNPLRE 338 (353)
T ss_dssp CTTCCEEECCSSCCSC-----CCCCCTTCCEEECCSSC-CSCC---------CC-----CCTTCCEEECCSSCCSS
T ss_pred CCCCCEEECCCCccCc-----cccccCCCCEEECCCCc-CCcc---------cc-----ccCCCCEEECcCCcCCC
Confidence 5678888888877653 22346778888887775 5431 11 01235666777777653
No 33
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.47 E-value=4.4e-08 Score=92.29 Aligned_cols=57 Identities=16% Similarity=0.139 Sum_probs=40.2
Q ss_pred hcCCCCCEEEccCCCCCChhHHHHHHHcCCcCCEEEeccCCCCHHHHHHHHhcCCCccEEEeccCCCCC
Q 009671 371 SNCQNLERLALCGSDTVGDVEISCIAAKCVALKKLCIKSCPVSDHGMEALAGGCPNLVKVKVKKCRAVT 439 (529)
Q Consensus 371 ~~~~~L~~L~l~~~~~~~~~~l~~l~~~~~~L~~L~l~~~~i~~~~l~~l~~~~~~L~~L~l~~c~~i~ 439 (529)
..+++|++|++++|. ++. +...+++|+.|++++|.+++ +...+++|++|++++|+ ++
T Consensus 281 ~~~~~L~~L~Ls~N~-l~~-----lp~~~~~L~~L~L~~N~L~~-----l~~~~~~L~~L~L~~N~-L~ 337 (353)
T d1jl5a_ 281 DLPPSLEELNVSNNK-LIE-----LPALPPRLERLIASFNHLAE-----VPELPQNLKQLHVEYNP-LR 337 (353)
T ss_dssp CCCTTCCEEECCSSC-CSC-----CCCCCTTCCEEECCSSCCSC-----CCCCCTTCCEEECCSSC-CS
T ss_pred ccCCCCCEEECCCCc-cCc-----cccccCCCCEEECCCCcCCc-----cccccCCCCEEECcCCc-CC
Confidence 346789999998874 332 11246789999999988764 22345689999999887 55
No 34
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.46 E-value=1.4e-08 Score=87.10 Aligned_cols=105 Identities=17% Similarity=0.229 Sum_probs=51.0
Q ss_pred hhcCCccEEEeeccccChHHHHHhhcCCCCCeEEecCCCCCChhhHHHHHHhCCCCcEEEecCcccCccChHHHHHHHhc
Q 009671 268 DRVTSLVEIHLERIQVTDVGLAAISNCLDLEIMHLVKTPECTNLGLAAVAERCKLLRKLHIDGWKANRIGDEGLIAVAKC 347 (529)
Q Consensus 268 ~~~~~L~~L~l~~~~l~~~~~~~l~~~~~L~~L~L~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~i~~~~l~~~~~~ 347 (529)
..+++|++|++++|.+++. ..+..+++|+.|++++| .++.. ..+...+++|+.|++++|....+ .. ...
T Consensus 45 ~~L~~L~~L~Ls~n~I~~i--~~l~~l~~L~~L~Ls~N-~i~~i--~~~~~~~~~L~~L~l~~N~i~~l-----~~-~~~ 113 (198)
T d1m9la_ 45 STLKACKHLALSTNNIEKI--SSLSGMENLRILSLGRN-LIKKI--ENLDAVADTLEELWISYNQIASL-----SG-IEK 113 (198)
T ss_dssp HHTTTCCEEECSEEEESCC--CCHHHHTTCCEEECCEE-EECSC--SSHHHHHHHCCEEECSEEECCCH-----HH-HHH
T ss_pred hcccccceeECcccCCCCc--ccccCCccccChhhccc-ccccc--ccccccccccccccccccccccc-----cc-ccc
Confidence 3456677777777766543 23445566666666655 22221 11111123466666655432221 11 123
Q ss_pred CccccceEeecccCcHHH-HHHHHhcCCCCCEEEccCC
Q 009671 348 CPNLQELVLIGVNPTRVS-LEVLASNCQNLERLALCGS 384 (529)
Q Consensus 348 ~~~L~~L~L~~~~i~~~~-l~~l~~~~~~L~~L~l~~~ 384 (529)
+++|+.|++++|.+++.. +..+ ..+++|+.|+++++
T Consensus 114 l~~L~~L~L~~N~i~~~~~~~~l-~~l~~L~~L~L~~N 150 (198)
T d1m9la_ 114 LVNLRVLYMSNNKITNWGEIDKL-AALDKLEDLLLAGN 150 (198)
T ss_dssp HHHSSEEEESEEECCCHHHHHHH-TTTTTCSEEEECSS
T ss_pred cccccccccccchhccccccccc-cCCCccceeecCCC
Confidence 455666666666555432 2223 45555555555544
No 35
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.44 E-value=4.9e-08 Score=76.46 Aligned_cols=29 Identities=17% Similarity=0.228 Sum_probs=13.3
Q ss_pred EEEeeccccChHHHHHhhcCCCCCeEEecCC
Q 009671 275 EIHLERIQVTDVGLAAISNCLDLEIMHLVKT 305 (529)
Q Consensus 275 ~L~l~~~~l~~~~~~~l~~~~~L~~L~L~~~ 305 (529)
.|+++++.+++.. .+..+++|++|+++++
T Consensus 2 ~L~Ls~n~l~~l~--~l~~l~~L~~L~ls~N 30 (124)
T d1dcea3 2 VLHLAHKDLTVLC--HLEQLLLVTHLDLSHN 30 (124)
T ss_dssp EEECTTSCCSSCC--CGGGGTTCCEEECCSS
T ss_pred EEEcCCCCCCCCc--ccccCCCCCEEECCCC
Confidence 4555555544321 2344445555555444
No 36
>d1p22a1 a.158.1.1 (A:135-252) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.40 E-value=3.4e-08 Score=76.57 Aligned_cols=48 Identities=29% Similarity=0.546 Sum_probs=41.3
Q ss_pred CCCcccCCC----HHHHHHHHccCChhhhhHHHHHhHHHHHhh--cccceeeee
Q 009671 47 AYDYISNLP----DECLACIFQSLSSGDRKRCSLVCRRWLRIE--GQSRHRLSL 94 (529)
Q Consensus 47 ~~~~~~~LP----~eil~~If~~L~~~d~~~~~~Vck~W~~~~--~~~~~~~~l 94 (529)
..|++..|| |||+.+||+||+++|++++++|||+|+.++ ..+|+.+..
T Consensus 7 ~~D~i~~LP~~l~~EI~~~Ils~Ld~~dL~~~s~Vck~W~~l~~d~~lWk~~~~ 60 (118)
T d1p22a1 7 QRDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIE 60 (118)
T ss_dssp CCCHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHH
T ss_pred cccHHHHCCCCChHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 358999999 499999999999999999999999999984 456776543
No 37
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.39 E-value=7.4e-08 Score=75.39 Aligned_cols=101 Identities=18% Similarity=0.219 Sum_probs=47.9
Q ss_pred CCCCcEEEecCcccCccChHHHHHHHhcCccccceEeecccCcHHHHHHHHhcCCCCCEEEccCCCCCChh-HHHHHHHc
Q 009671 320 CKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSDTVGDV-EISCIAAK 398 (529)
Q Consensus 320 ~~~L~~L~L~~~~~~~i~~~~l~~~~~~~~~L~~L~L~~~~i~~~~l~~l~~~~~~L~~L~l~~~~~~~~~-~l~~l~~~ 398 (529)
+++|++|++++|....+.+ + ...+++|+.|++++|.+++.. .+ ..+++|++|+++++. +++. .+..+ ..
T Consensus 19 l~~L~~L~ls~N~l~~lp~-~----~~~l~~L~~L~l~~N~i~~l~--~~-~~l~~L~~L~l~~N~-i~~~~~~~~l-~~ 88 (124)
T d1dcea3 19 LLLVTHLDLSHNRLRALPP-A----LAALRCLEVLQASDNALENVD--GV-ANLPRLQELLLCNNR-LQQSAAIQPL-VS 88 (124)
T ss_dssp GTTCCEEECCSSCCCCCCG-G----GGGCTTCCEEECCSSCCCCCG--GG-TTCSSCCEEECCSSC-CCSSSTTGGG-GG
T ss_pred CCCCCEEECCCCccCcchh-h----hhhhhcccccccccccccccC--cc-ccccccCeEECCCCc-cCCCCCchhh-cC
Confidence 4556666666554433322 1 124556666666666555421 22 455666666665553 2221 12222 23
Q ss_pred CCcCCEEEeccCCCCHH--HHHHHHhcCCCccEE
Q 009671 399 CVALKKLCIKSCPVSDH--GMEALAGGCPNLVKV 430 (529)
Q Consensus 399 ~~~L~~L~l~~~~i~~~--~l~~l~~~~~~L~~L 430 (529)
+++|+.|++++|++++. ....+...+|+|+.|
T Consensus 89 ~~~L~~L~l~~N~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 89 CPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp CTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred CCCCCEEECCCCcCCcCccHHHHHHHHCcCcceE
Confidence 56666666666654321 112333345555544
No 38
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.36 E-value=4.7e-08 Score=83.67 Aligned_cols=127 Identities=17% Similarity=0.180 Sum_probs=71.0
Q ss_pred hhcCCCCCeEEecCCCCCChhhHHHHHHhCCCCcEEEecCcccCccChHHHHHHHhcCccccceEeecccCcHHHHHHHH
Q 009671 291 ISNCLDLEIMHLVKTPECTNLGLAAVAERCKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLA 370 (529)
Q Consensus 291 l~~~~~L~~L~L~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~i~~~~l~~~~~~~~~L~~L~L~~~~i~~~~l~~l~ 370 (529)
+..+++|++|+++++ .++.. ..+ ..+++|+.|+|++|....+.. +...+++|+.|++++|.++.. ..+
T Consensus 44 l~~L~~L~~L~Ls~n-~I~~i--~~l-~~l~~L~~L~Ls~N~i~~i~~-----~~~~~~~L~~L~l~~N~i~~l--~~~- 111 (198)
T d1m9la_ 44 LSTLKACKHLALSTN-NIEKI--SSL-SGMENLRILSLGRNLIKKIEN-----LDAVADTLEELWISYNQIASL--SGI- 111 (198)
T ss_dssp HHHTTTCCEEECSEE-EESCC--CCH-HHHTTCCEEECCEEEECSCSS-----HHHHHHHCCEEECSEEECCCH--HHH-
T ss_pred HhcccccceeECccc-CCCCc--ccc-cCCccccChhhcccccccccc-----ccccccccccccccccccccc--ccc-
Confidence 455677777777765 23322 112 235677777777765444432 112235677777777777653 223
Q ss_pred hcCCCCCEEEccCCCCCChhH-HHHHHHcCCcCCEEEeccCCCCHHH---------HHHHHhcCCCccEEE
Q 009671 371 SNCQNLERLALCGSDTVGDVE-ISCIAAKCVALKKLCIKSCPVSDHG---------MEALAGGCPNLVKVK 431 (529)
Q Consensus 371 ~~~~~L~~L~l~~~~~~~~~~-l~~l~~~~~~L~~L~l~~~~i~~~~---------l~~l~~~~~~L~~L~ 431 (529)
..+++|+.|+++++. +++.. +.. ...+++|+.|++++|++.... ...+...+|+|+.|+
T Consensus 112 ~~l~~L~~L~L~~N~-i~~~~~~~~-l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 112 EKLVNLRVLYMSNNK-ITNWGEIDK-LAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp HHHHHSSEEEESEEE-CCCHHHHHH-HTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred cccccccccccccch-hcccccccc-ccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence 456677777777663 44432 222 335777777777777643221 112233577777765
No 39
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.09 E-value=6.1e-09 Score=92.87 Aligned_cols=186 Identities=12% Similarity=0.020 Sum_probs=82.1
Q ss_pred hhcCCCCCeEeccccCCCchHHHHHHHhhcCCccEEEeec-cccChHHHHHhhcCCCCCeEEecCCCCCChhhHHHHHHh
Q 009671 241 IIGAKNLRTLKLFRCSGDWDKLLQLVTDRVTSLVEIHLER-IQVTDVGLAAISNCLDLEIMHLVKTPECTNLGLAAVAER 319 (529)
Q Consensus 241 ~~~~~~L~~L~l~~~~~~~~~~l~~l~~~~~~L~~L~l~~-~~l~~~~~~~l~~~~~L~~L~L~~~~~~~~~~l~~l~~~ 319 (529)
+.++++|++|+++++...... -......++.++++.+.. +.+.......+..+++|+.+++.++ .+...........
T Consensus 49 f~~l~~L~~L~ls~n~~~~~i-~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~-~l~~~~~~~~~~~ 126 (242)
T d1xwdc1 49 FSGFGDLEKIEISQNDVLEVI-EADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNT-GIKHLPDVHKIHS 126 (242)
T ss_dssp TTTCTTCCEEEEESCTTCCEE-CSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEEEESC-CCCSCCCCTTTCB
T ss_pred hhccchhhhhhhcccccccee-eccccccccccccccccccccccccccccccccccccccccchh-hhccccccccccc
Confidence 345666666666654321100 000112345566666544 2444444444556677777777765 2222211111111
Q ss_pred CCCCcEEEecCcccCccChHHHHHHHhcCccccceEeecccCcHHHHHHHHhcCCCCCEEEccCCCCCChhHHHHHHHcC
Q 009671 320 CKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSDTVGDVEISCIAAKC 399 (529)
Q Consensus 320 ~~~L~~L~L~~~~~~~i~~~~l~~~~~~~~~L~~L~L~~~~i~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~l~~l~~~~ 399 (529)
...+..+...+.....+....+ ......++.|++.++.++...... ...++++++....+..++.-... ...++
T Consensus 127 l~~l~~~~~~n~~l~~i~~~~~---~~~~~~l~~L~l~~n~l~~i~~~~--~~~~~l~~~~~l~~n~l~~l~~~-~f~~l 200 (242)
T d1xwdc1 127 LQKVLLDIQDNINIHTIERNSF---VGLSFESVILWLNKNGIQEIHNCA--FNGTQLDELNLSDNNNLEELPND-VFHGA 200 (242)
T ss_dssp SSCEEEEEESCTTCCEECTTSS---TTSBSSCEEEECCSSCCCEECTTT--TTTCCEEEEECTTCTTCCCCCTT-TTTTS
T ss_pred cccccccccccccccccccccc---ccccccceeeeccccccccccccc--ccchhhhccccccccccccccHH-HhcCC
Confidence 2233333333322222222111 111236667777777665432211 23455555544333334321111 12457
Q ss_pred CcCCEEEeccCCCCHHHHHHHHhcCCCccEEEeccC
Q 009671 400 VALKKLCIKSCPVSDHGMEALAGGCPNLVKVKVKKC 435 (529)
Q Consensus 400 ~~L~~L~l~~~~i~~~~l~~l~~~~~~L~~L~l~~c 435 (529)
++|++|+|++|+++...... .+.+++|+.+++...
T Consensus 201 ~~L~~L~Ls~N~l~~l~~~~-~~~l~~L~~l~~~~l 235 (242)
T d1xwdc1 201 SGPVILDISRTRIHSLPSYG-LENLKKLRARSTYNL 235 (242)
T ss_dssp CCCSEEECTTSCCCCCCSSS-CTTCCEEESSSEESS
T ss_pred CCCCEEECCCCcCCccCHHH-HcCCcccccCcCCCC
Confidence 88888888888765321111 223444554444443
No 40
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.08 E-value=3.3e-07 Score=77.98 Aligned_cols=106 Identities=15% Similarity=0.120 Sum_probs=48.9
Q ss_pred CccEEEeeccccCh-HHHHHhhcCCCCCeEEecCCCCCChhhHHHHHHhCCCCcEEEecCcccCccChHHHHHHHhcCcc
Q 009671 272 SLVEIHLERIQVTD-VGLAAISNCLDLEIMHLVKTPECTNLGLAAVAERCKLLRKLHIDGWKANRIGDEGLIAVAKCCPN 350 (529)
Q Consensus 272 ~L~~L~l~~~~l~~-~~~~~l~~~~~L~~L~L~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~i~~~~l~~~~~~~~~ 350 (529)
++++|+|++|.++. .....+..+++|+.|+++++. +..... .....+++|++|+|++|....+.... +..+++
T Consensus 30 ~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~-i~~~~~-~~~~~~~~L~~L~Ls~N~l~~l~~~~----F~~l~~ 103 (192)
T d1w8aa_ 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQ-LTGIEP-NAFEGASHIQELQLGENKIKEISNKM----FLGLHQ 103 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSC-CCCBCT-TTTTTCTTCCEEECCSCCCCEECSSS----STTCTT
T ss_pred CCCEEEeCCCCCcccccccccCCCceEeeeeccccc-cccccc-cccccccccceeeeccccccccCHHH----HhCCCc
Confidence 45666666665543 222334455666666666552 211111 11123456666666665544443321 134555
Q ss_pred ccceEeecccCcHHHHHHHHhcCCCCCEEEccCC
Q 009671 351 LQELVLIGVNPTRVSLEVLASNCQNLERLALCGS 384 (529)
Q Consensus 351 L~~L~L~~~~i~~~~l~~l~~~~~~L~~L~l~~~ 384 (529)
|++|+|++|.++......+ ..+++|++|+++++
T Consensus 104 L~~L~L~~N~l~~i~~~~f-~~l~~L~~l~L~~N 136 (192)
T d1w8aa_ 104 LKTLNLYDNQISCVMPGSF-EHLNSLTSLNLASN 136 (192)
T ss_dssp CCEEECCSSCCCEECTTSS-TTCTTCCEEECTTC
T ss_pred ccccccCCccccccCHHHh-cCCccccccccccc
Confidence 6666666555543222222 33444444444443
No 41
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.87 E-value=3.8e-07 Score=80.78 Aligned_cols=18 Identities=6% Similarity=-0.151 Sum_probs=11.4
Q ss_pred hcCccccceEeecccCcH
Q 009671 346 KCCPNLQELVLIGVNPTR 363 (529)
Q Consensus 346 ~~~~~L~~L~L~~~~i~~ 363 (529)
.++++|+.|++++|.++.
T Consensus 198 ~~l~~L~~L~Ls~N~l~~ 215 (242)
T d1xwdc1 198 HGASGPVILDISRTRIHS 215 (242)
T ss_dssp TTSCCCSEEECTTSCCCC
T ss_pred cCCCCCCEEECCCCcCCc
Confidence 346677777777666653
No 42
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=97.78 E-value=3.5e-06 Score=71.35 Aligned_cols=35 Identities=17% Similarity=0.217 Sum_probs=17.2
Q ss_pred CCCEEEecCcccChHHHHHHHhcCCCCCEEecCCc
Q 009671 168 GLKKLSCGSCTFGAKGMNAVLDNCSTLEELSVKRL 202 (529)
Q Consensus 168 ~L~~L~L~~~~~~~~~l~~~~~~~~~L~~L~l~~~ 202 (529)
++++|+|++|.++.......+..+++|++|++.++
T Consensus 30 ~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N 64 (192)
T d1w8aa_ 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRN 64 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSS
T ss_pred CCCEEEeCCCCCcccccccccCCCceEeeeecccc
Confidence 56666666665532111112334556666666543
No 43
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.41 E-value=5.2e-05 Score=61.76 Aligned_cols=81 Identities=25% Similarity=0.387 Sum_probs=34.5
Q ss_pred cCccccceEeecccCcHHH-HHHHHhcCCCCCEEEccCCCCCCh-hHHHHHHHcCCcCCEEEeccCCCCH------HHHH
Q 009671 347 CCPNLQELVLIGVNPTRVS-LEVLASNCQNLERLALCGSDTVGD-VEISCIAAKCVALKKLCIKSCPVSD------HGME 418 (529)
Q Consensus 347 ~~~~L~~L~L~~~~i~~~~-l~~l~~~~~~L~~L~l~~~~~~~~-~~l~~l~~~~~~L~~L~l~~~~i~~------~~l~ 418 (529)
.+++|+.|++++|++++.. +......+++|+.|+++++. +++ ..+..+ ...+|+.|++++|++.. .-..
T Consensus 63 ~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~-i~~l~~l~~l--~~~~L~~L~L~~Npl~~~~~~~~~y~~ 139 (162)
T d1koha1 63 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNE-LKSERELDKI--KGLKLEELWLDGNSLSDTFRDQSTYIS 139 (162)
T ss_dssp HCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSC-CCCGGGHHHH--TTCCCSSCCCTTSTTSSSSSSHHHHHH
T ss_pred hCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCc-cccchhhhhh--hccccceeecCCCCcCcCcccchhHHH
Confidence 4455555555555444321 12222445555555555543 222 222221 12345555555555331 1223
Q ss_pred HHHhcCCCccEE
Q 009671 419 ALAGGCPNLVKV 430 (529)
Q Consensus 419 ~l~~~~~~L~~L 430 (529)
.+.+.+|+|+.|
T Consensus 140 ~i~~~~P~L~~L 151 (162)
T d1koha1 140 AIRERFPKLLRL 151 (162)
T ss_dssp HHHTTSTTCCEE
T ss_pred HHHHHCCCCCEE
Confidence 344445555555
No 44
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.19 E-value=0.00011 Score=59.84 Aligned_cols=88 Identities=25% Similarity=0.246 Sum_probs=46.6
Q ss_pred HHHhCCCCcEEEecCcccCccChHHHHHHHhcCccccceEeecccCcHHHHHHHHhcCCCCCEEEccCCCCCC---h--h
Q 009671 316 VAERCKLLRKLHIDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTRVSLEVLASNCQNLERLALCGSDTVG---D--V 390 (529)
Q Consensus 316 l~~~~~~L~~L~L~~~~~~~i~~~~l~~~~~~~~~L~~L~L~~~~i~~~~l~~l~~~~~~L~~L~l~~~~~~~---~--~ 390 (529)
+...+++|+.|+|++|....+.+ +......+++|+.|++++|.+++..-.... ...+|+.|++.+++-.. + .
T Consensus 60 ~~~~~~~L~~L~Ls~N~i~~l~~--~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l-~~~~L~~L~L~~Npl~~~~~~~~~ 136 (162)
T d1koha1 60 IEENIPELLSLNLSNNRLYRLDD--MSSIVQKAPNLKILNLSGNELKSERELDKI-KGLKLEELWLDGNSLSDTFRDQST 136 (162)
T ss_dssp HHHHCTTCCCCCCCSSCCCCCSG--GGTHHHHSTTCCCCCCTTSCCCCGGGHHHH-TTCCCSSCCCTTSTTSSSSSSHHH
T ss_pred HHHhCCCCCEeeCCCccccCCch--hHHHHhhCCcccccccccCccccchhhhhh-hccccceeecCCCCcCcCcccchh
Confidence 33456677777776665443332 222334567777777777766653221221 23357777777664211 1 1
Q ss_pred HHHHHHHcCCcCCEEE
Q 009671 391 EISCIAAKCVALKKLC 406 (529)
Q Consensus 391 ~l~~l~~~~~~L~~L~ 406 (529)
....+...+|+|+.||
T Consensus 137 y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 137 YISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHHTTSTTCCEET
T ss_pred HHHHHHHHCCCCCEEC
Confidence 2344455577777664
No 45
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.15 E-value=8.9e-05 Score=59.86 Aligned_cols=10 Identities=30% Similarity=0.660 Sum_probs=4.9
Q ss_pred CCEEEeccCC
Q 009671 402 LKKLCIKSCP 411 (529)
Q Consensus 402 L~~L~l~~~~ 411 (529)
|+.|+|++|+
T Consensus 105 l~~L~L~~Np 114 (156)
T d2ifga3 105 LQELVLSGNP 114 (156)
T ss_dssp CCEEECCSSC
T ss_pred ccccccCCCc
Confidence 4444554444
No 46
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.92 E-value=0.00018 Score=57.93 Aligned_cols=14 Identities=21% Similarity=0.287 Sum_probs=6.0
Q ss_pred hcCCCCCeEEecCC
Q 009671 292 SNCLDLEIMHLVKT 305 (529)
Q Consensus 292 ~~~~~L~~L~L~~~ 305 (529)
..+++|+.|+++++
T Consensus 53 ~~l~~L~~L~Ls~N 66 (156)
T d2ifga3 53 RGLGELRNLTIVKS 66 (156)
T ss_dssp CSCCCCSEEECCSS
T ss_pred ccccccCcceeecc
Confidence 33444444444433
Done!