Query 009673
Match_columns 529
No_of_seqs 371 out of 3411
Neff 8.2
Searched_HMMs 46136
Date Thu Mar 28 15:58:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009673.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009673hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2467 Glycine/serine hydroxy 100.0 2E-109 4E-114 801.4 38.1 452 77-529 15-475 (477)
2 COG0112 GlyA Glycine/serine hy 100.0 8.7E-97 2E-101 727.2 41.6 408 81-528 5-413 (413)
3 PLN02271 serine hydroxymethylt 100.0 2E-92 4.4E-97 737.6 44.3 445 79-529 125-584 (586)
4 PF00464 SHMT: Serine hydroxym 100.0 3.6E-83 7.7E-88 654.7 30.8 391 83-473 1-399 (399)
5 PLN03226 serine hydroxymethylt 100.0 5.3E-74 1.2E-78 609.6 45.6 449 78-529 10-466 (475)
6 PRK13580 serine hydroxymethylt 100.0 4.4E-73 9.4E-78 591.9 42.0 424 81-528 28-487 (493)
7 PTZ00094 serine hydroxymethylt 100.0 5.2E-62 1.1E-66 519.2 46.5 442 79-529 11-452 (452)
8 PRK13034 serine hydroxymethylt 100.0 6.4E-54 1.4E-58 451.9 44.4 412 77-526 3-415 (416)
9 PRK00011 glyA serine hydroxyme 100.0 7.5E-49 1.6E-53 415.0 43.8 412 79-528 2-414 (416)
10 cd00378 SHMT Serine-glycine hy 100.0 5E-46 1.1E-50 391.6 41.4 383 85-479 2-385 (402)
11 COG0436 Aspartate/tyrosine/aro 100.0 1.9E-31 4.1E-36 278.1 32.9 339 103-478 29-390 (393)
12 COG0520 csdA Selenocysteine ly 100.0 2E-30 4.3E-35 270.2 31.2 347 105-478 24-404 (405)
13 cd06451 AGAT_like Alanine-glyo 100.0 5.5E-28 1.2E-32 250.3 33.0 331 105-477 1-355 (356)
14 PRK10874 cysteine sulfinate de 100.0 1.3E-27 2.7E-32 251.8 32.0 343 104-478 20-397 (401)
15 COG1104 NifS Cysteine sulfinat 100.0 7.7E-28 1.7E-32 242.5 28.5 340 111-481 10-379 (386)
16 PRK13238 tnaA tryptophanase/L- 100.0 1.2E-27 2.6E-32 254.3 29.7 341 103-482 37-436 (460)
17 PRK09295 bifunctional cysteine 100.0 2.7E-27 5.8E-32 249.7 31.1 345 104-478 24-403 (406)
18 TIGR03392 FeS_syn_CsdA cystein 100.0 4.9E-27 1.1E-31 247.0 32.9 343 104-478 17-394 (398)
19 TIGR01979 sufS cysteine desulf 100.0 1E-26 2.2E-31 244.9 33.2 344 104-478 19-400 (403)
20 PLN02855 Bifunctional selenocy 100.0 9.7E-27 2.1E-31 246.8 31.3 347 104-480 33-419 (424)
21 COG1168 MalY Bifunctional PLP- 100.0 1.2E-26 2.7E-31 229.4 29.3 337 103-478 26-385 (388)
22 PLN02409 serine--glyoxylate am 100.0 3.6E-26 7.8E-31 240.5 33.9 333 105-479 11-372 (401)
23 TIGR01976 am_tr_V_VC1184 cyste 100.0 1.9E-26 4E-31 242.5 31.5 337 105-473 19-397 (397)
24 PLN00175 aminotransferase fami 100.0 3.6E-26 7.8E-31 241.3 33.6 359 80-478 33-412 (413)
25 cd06453 SufS_like Cysteine des 100.0 2.2E-26 4.8E-31 239.8 30.2 335 109-473 6-373 (373)
26 TIGR01977 am_tr_V_EF2568 cyste 100.0 5.3E-26 1.1E-30 237.2 31.4 335 113-475 11-375 (376)
27 PRK02948 cysteine desulfurase; 100.0 4.1E-26 8.9E-31 238.6 30.0 340 109-478 7-373 (381)
28 TIGR03402 FeS_nifS cysteine de 100.0 9E-26 1.9E-30 235.9 32.1 341 109-479 6-372 (379)
29 TIGR01822 2am3keto_CoA 2-amino 100.0 1.4E-25 3E-30 235.5 31.8 333 103-478 39-388 (393)
30 PF00266 Aminotran_5: Aminotra 99.9 7.8E-26 1.7E-30 235.7 29.0 332 109-469 6-371 (371)
31 TIGR03403 nifS_epsilon cystein 99.9 3E-25 6.5E-30 232.2 31.9 340 109-479 6-375 (382)
32 KOG0257 Kynurenine aminotransf 99.9 6.6E-26 1.4E-30 226.3 25.3 299 80-412 9-344 (420)
33 PRK08960 hypothetical protein; 99.9 5.9E-25 1.3E-29 230.4 32.8 339 103-477 33-385 (387)
34 PRK07366 succinyldiaminopimela 99.9 6.1E-25 1.3E-29 230.4 32.2 336 102-476 30-387 (388)
35 PRK07681 aspartate aminotransf 99.9 1.2E-24 2.5E-29 229.0 34.4 333 103-475 33-384 (399)
36 PRK12414 putative aminotransfe 99.9 5.8E-25 1.3E-29 230.2 31.9 351 83-474 11-382 (384)
37 TIGR02326 transamin_PhnW 2-ami 99.9 1.3E-24 2.9E-29 225.7 34.1 332 104-477 4-360 (363)
38 PLN02651 cysteine desulfurase 99.9 2.6E-25 5.7E-30 231.1 27.7 324 109-466 6-363 (364)
39 COG0075 Serine-pyruvate aminot 99.9 2E-24 4.2E-29 219.6 33.0 340 104-480 6-364 (383)
40 PRK06108 aspartate aminotransf 99.9 1.1E-24 2.3E-29 227.8 32.1 334 102-478 24-381 (382)
41 PRK08361 aspartate aminotransf 99.9 1.4E-24 2.9E-29 228.0 32.7 338 102-478 33-389 (391)
42 TIGR03540 DapC_direct LL-diami 99.9 3.3E-24 7.1E-29 224.5 35.3 334 102-474 29-381 (383)
43 cd00617 Tnase_like Tryptophana 99.9 4.6E-25 1E-29 231.6 28.7 312 140-483 49-412 (431)
44 PRK05957 aspartate aminotransf 99.9 3.1E-24 6.7E-29 225.1 34.8 358 83-479 8-385 (389)
45 PRK06348 aspartate aminotransf 99.9 2.6E-24 5.6E-29 225.3 33.1 359 77-475 4-381 (384)
46 PRK06207 aspartate aminotransf 99.9 2.6E-24 5.6E-29 226.8 33.2 340 102-479 39-402 (405)
47 PRK06290 aspartate aminotransf 99.9 2.2E-24 4.7E-29 227.4 32.5 337 103-479 45-405 (410)
48 PRK07682 hypothetical protein; 99.9 1.6E-24 3.5E-29 226.4 31.2 337 103-478 21-375 (378)
49 PRK13479 2-aminoethylphosphona 99.9 4.3E-24 9.3E-29 222.3 33.8 333 105-479 7-363 (368)
50 PRK07179 hypothetical protein; 99.9 4E-24 8.7E-29 225.6 33.5 326 109-479 60-398 (407)
51 PRK07337 aminotransferase; Val 99.9 2.3E-24 4.9E-29 226.0 31.3 339 102-477 30-387 (388)
52 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 3.4E-24 7.3E-29 224.6 32.5 329 104-478 20-380 (387)
53 TIGR02006 IscS cysteine desulf 99.9 2.2E-24 4.8E-29 227.2 29.6 341 105-480 5-378 (402)
54 PRK13355 bifunctional HTH-doma 99.9 7.2E-24 1.6E-28 230.0 34.2 361 79-478 119-513 (517)
55 cd06454 KBL_like KBL_like; thi 99.9 2.8E-24 6E-29 221.7 29.6 319 115-476 17-348 (349)
56 PRK09082 methionine aminotrans 99.9 2.1E-24 4.5E-29 226.2 29.0 358 81-475 10-385 (386)
57 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 5.5E-24 1.2E-28 221.7 31.8 330 103-478 7-367 (370)
58 PRK08068 transaminase; Reviewe 99.9 9.1E-24 2E-28 221.6 33.2 333 103-474 33-384 (389)
59 PRK09276 LL-diaminopimelate am 99.9 1.1E-23 2.3E-28 220.8 33.5 333 103-474 32-383 (385)
60 COG0399 WecE Predicted pyridox 99.9 2.2E-24 4.8E-29 219.5 27.4 323 111-478 10-372 (374)
61 PRK06939 2-amino-3-ketobutyrat 99.9 6.8E-24 1.5E-28 222.7 31.9 334 103-478 43-392 (397)
62 PRK05942 aspartate aminotransf 99.9 1.3E-23 2.7E-28 220.9 33.6 319 103-454 36-373 (394)
63 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1.3E-23 2.8E-28 217.1 32.1 326 107-476 3-354 (355)
64 TIGR03235 DNA_S_dndA cysteine 99.9 3.6E-24 7.8E-29 221.6 27.7 300 109-436 5-322 (353)
65 PRK07683 aminotransferase A; V 99.9 1.8E-23 4E-28 219.1 32.7 336 103-478 29-382 (387)
66 PRK07309 aromatic amino acid a 99.9 3E-23 6.6E-28 217.7 34.4 338 103-478 31-387 (391)
67 PRK08912 hypothetical protein; 99.9 2E-23 4.4E-28 218.8 32.9 359 83-478 8-385 (387)
68 TIGR01814 kynureninase kynuren 99.9 7.8E-24 1.7E-28 223.3 29.8 338 103-477 27-405 (406)
69 PLN00145 tyrosine/nicotianamin 99.9 1.3E-23 2.9E-28 222.8 31.5 345 103-480 53-425 (430)
70 TIGR00858 bioF 8-amino-7-oxono 99.9 1.2E-23 2.7E-28 217.5 30.6 327 103-473 17-359 (360)
71 PRK07550 hypothetical protein; 99.9 5.7E-23 1.2E-27 215.3 35.0 334 103-475 30-383 (386)
72 PRK13520 L-tyrosine decarboxyl 99.9 3.5E-23 7.5E-28 215.5 32.9 327 107-478 25-370 (371)
73 TIGR03537 DapC succinyldiamino 99.9 2.4E-23 5.2E-28 215.3 31.3 329 105-475 3-349 (350)
74 PRK08636 aspartate aminotransf 99.9 4.5E-23 9.8E-28 217.3 33.9 340 103-479 34-400 (403)
75 PLN02656 tyrosine transaminase 99.9 1.1E-23 2.5E-28 222.2 29.1 345 102-479 31-403 (409)
76 COG0156 BioF 7-keto-8-aminopel 99.9 1.5E-23 3.3E-28 215.0 29.0 325 108-476 44-387 (388)
77 PRK06225 aspartate aminotransf 99.9 3.5E-23 7.6E-28 216.4 32.3 335 102-479 28-376 (380)
78 PRK07777 aminotransferase; Val 99.9 3.5E-23 7.7E-28 217.0 32.1 359 83-477 6-384 (387)
79 PRK07324 transaminase; Validat 99.9 1.1E-23 2.4E-28 219.7 27.9 328 103-479 27-370 (373)
80 PLN02187 rooty/superroot1 99.9 4.2E-23 9.1E-28 220.6 32.6 346 103-480 67-439 (462)
81 PRK05764 aspartate aminotransf 99.9 6.1E-23 1.3E-27 215.5 32.9 335 103-478 32-390 (393)
82 TIGR01437 selA_rel uncharacter 99.9 5.2E-23 1.1E-27 213.5 30.9 311 110-476 21-362 (363)
83 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 8.3E-23 1.8E-27 212.2 32.2 322 108-477 7-360 (361)
84 PRK14807 histidinol-phosphate 99.9 5.9E-23 1.3E-27 212.4 30.9 317 104-477 24-350 (351)
85 PRK06855 aminotransferase; Val 99.9 6.8E-23 1.5E-27 217.7 31.6 346 103-479 33-429 (433)
86 PRK14012 cysteine desulfurase; 99.9 6.1E-23 1.3E-27 216.4 30.5 340 109-480 10-380 (404)
87 PRK08363 alanine aminotransfer 99.9 1.3E-22 2.9E-27 213.4 33.0 336 103-478 31-393 (398)
88 cd00613 GDC-P Glycine cleavage 99.9 9.7E-23 2.1E-27 214.3 31.7 294 147-473 63-398 (398)
89 PRK09148 aminotransferase; Val 99.9 2.3E-22 4.9E-27 212.0 34.5 340 103-480 31-391 (405)
90 PRK05958 8-amino-7-oxononanoat 99.9 1.1E-22 2.5E-27 212.5 32.0 330 103-476 40-384 (385)
91 PRK11658 UDP-4-amino-4-deoxy-L 99.9 3.9E-23 8.4E-28 215.8 28.3 324 112-477 10-377 (379)
92 PRK04870 histidinol-phosphate 99.9 3.7E-23 8.1E-28 214.3 27.6 320 103-476 27-355 (356)
93 PLN03026 histidinol-phosphate 99.9 6.3E-23 1.4E-27 214.4 29.5 317 103-476 53-379 (380)
94 PRK09147 succinyldiaminopimela 99.9 1.3E-22 2.7E-27 213.4 31.6 335 102-477 29-394 (396)
95 cd00616 AHBA_syn 3-amino-5-hyd 99.9 2.4E-23 5.1E-28 215.1 25.6 295 144-474 18-352 (352)
96 TIGR03588 PseC UDP-4-keto-6-de 99.9 4.5E-23 9.7E-28 215.7 27.4 322 114-477 8-380 (380)
97 PLN02483 serine palmitoyltrans 99.9 1E-22 2.2E-27 218.7 29.9 320 115-479 121-466 (489)
98 PLN00143 tyrosine/nicotianamin 99.9 1.3E-22 2.9E-27 214.0 30.3 345 102-479 32-404 (409)
99 TIGR01141 hisC histidinol-phos 99.9 5.7E-23 1.2E-27 212.0 26.9 314 103-473 20-345 (346)
100 PLN02376 1-aminocyclopropane-1 99.9 9.3E-23 2E-27 219.2 29.1 342 103-480 47-439 (496)
101 TIGR03538 DapC_gpp succinyldia 99.9 1.5E-22 3.3E-27 212.6 30.1 333 102-475 28-391 (393)
102 PRK03317 histidinol-phosphate 99.9 1.7E-22 3.6E-27 210.5 29.7 322 104-478 28-363 (368)
103 PRK06107 aspartate aminotransf 99.9 2.8E-22 6E-27 211.2 31.3 335 103-478 34-399 (402)
104 PRK05387 histidinol-phosphate 99.9 1.4E-22 3E-27 209.7 28.1 317 103-478 25-352 (353)
105 PRK08153 histidinol-phosphate 99.9 2.7E-22 5.8E-27 209.0 30.4 320 104-479 34-365 (369)
106 COG0079 HisC Histidinol-phosph 99.9 2.7E-22 5.8E-27 206.0 29.9 316 103-478 23-353 (356)
107 PRK08175 aminotransferase; Val 99.9 9.1E-22 2E-26 206.9 34.6 338 103-478 30-388 (395)
108 cd06502 TA_like Low-specificit 99.9 1E-22 2.2E-27 209.2 26.7 318 109-475 3-337 (338)
109 PRK13392 5-aminolevulinate syn 99.9 1.9E-22 4E-27 213.1 29.4 320 115-478 62-396 (410)
110 PRK15481 transcriptional regul 99.9 1.2E-22 2.5E-27 216.0 28.0 275 171-478 143-430 (431)
111 PLN02450 1-aminocyclopropane-1 99.9 1.7E-22 3.6E-27 216.3 29.3 343 103-478 39-429 (468)
112 PRK01533 histidinol-phosphate 99.9 9.7E-23 2.1E-27 211.8 26.7 309 103-478 30-354 (366)
113 PTZ00377 alanine aminotransfer 99.9 4.5E-22 9.7E-27 214.2 32.6 332 113-480 88-476 (481)
114 TIGR01825 gly_Cac_T_rel pyrido 99.9 5.3E-22 1.2E-26 207.7 32.3 333 103-478 34-380 (385)
115 TIGR01821 5aminolev_synth 5-am 99.9 3.2E-22 7E-27 210.8 30.8 328 107-478 49-395 (402)
116 KOG1549 Cysteine desulfurase N 99.9 6.3E-23 1.4E-27 207.7 24.0 347 103-480 43-419 (428)
117 TIGR03812 tyr_de_CO2_Arch tyro 99.9 5.2E-22 1.1E-26 206.8 31.9 315 114-475 32-372 (373)
118 TIGR03576 pyridox_MJ0158 pyrid 99.9 1.6E-22 3.5E-27 208.1 27.3 301 115-477 35-345 (346)
119 PLN03227 serine palmitoyltrans 99.9 4.3E-22 9.3E-27 208.6 31.0 335 109-480 4-383 (392)
120 TIGR01264 tyr_amTase_E tyrosin 99.9 5.2E-22 1.1E-26 209.1 31.7 340 102-478 31-398 (401)
121 PTZ00433 tyrosine aminotransfe 99.9 2.3E-22 5E-27 212.5 28.9 342 102-479 33-408 (412)
122 PRK03158 histidinol-phosphate 99.9 1.5E-22 3.3E-27 210.0 26.9 314 103-476 30-358 (359)
123 PRK09064 5-aminolevulinate syn 99.9 5.5E-22 1.2E-26 209.3 31.5 328 107-478 50-396 (407)
124 PLN02721 threonine aldolase 99.9 5.1E-22 1.1E-26 205.2 29.8 323 105-478 8-351 (353)
125 PLN02231 alanine transaminase 99.9 6.6E-22 1.4E-26 213.9 31.7 343 103-479 130-527 (534)
126 TIGR01265 tyr_nico_aTase tyros 99.9 2.3E-21 5.1E-26 204.3 35.2 343 102-478 31-400 (403)
127 PRK09265 aminotransferase AlaT 99.9 1.4E-21 3E-26 206.1 33.2 337 103-478 34-400 (404)
128 PRK09275 aspartate aminotransf 99.9 1.8E-22 3.9E-27 215.8 26.5 344 103-481 101-519 (527)
129 PLN02822 serine palmitoyltrans 99.9 9.1E-22 2E-26 210.9 32.0 337 103-480 110-478 (481)
130 PRK02731 histidinol-phosphate 99.9 4.1E-22 8.8E-27 207.4 28.5 318 103-478 33-365 (367)
131 PRK04366 glycine dehydrogenase 99.9 7.9E-22 1.7E-26 211.7 31.4 332 110-480 78-449 (481)
132 PRK09105 putative aminotransfe 99.9 5.5E-22 1.2E-26 206.5 29.1 311 103-477 44-368 (370)
133 PRK08056 threonine-phosphate d 99.9 6E-22 1.3E-26 205.3 29.0 318 103-478 21-354 (356)
134 KOG0259 Tyrosine aminotransfer 99.9 1.3E-21 2.7E-26 192.5 27.7 333 113-480 78-434 (447)
135 PRK00950 histidinol-phosphate 99.9 5.2E-22 1.1E-26 206.0 26.7 315 103-477 35-360 (361)
136 PRK07590 L,L-diaminopimelate a 99.9 1.2E-21 2.6E-26 206.9 29.8 330 103-476 35-408 (409)
137 PRK02610 histidinol-phosphate 99.9 1.3E-21 2.7E-26 204.3 29.6 321 104-478 30-370 (374)
138 PRK03321 putative aminotransfe 99.9 6.4E-22 1.4E-26 204.7 26.4 313 103-477 23-349 (352)
139 PRK05166 histidinol-phosphate 99.9 1.1E-21 2.3E-26 204.6 28.1 318 103-477 37-369 (371)
140 PRK10534 L-threonine aldolase; 99.9 7.4E-22 1.6E-26 202.7 25.5 317 105-477 2-331 (333)
141 PRK13393 5-aminolevulinate syn 99.9 3.8E-21 8.2E-26 202.9 31.4 328 108-479 50-396 (406)
142 TIGR03801 asp_4_decarbox aspar 99.9 6.4E-22 1.4E-26 211.4 25.7 344 103-480 95-517 (521)
143 PRK07865 N-succinyldiaminopime 99.9 2.3E-21 4.9E-26 201.6 29.2 338 80-474 4-363 (364)
144 PLN02672 methionine S-methyltr 99.9 2.6E-21 5.5E-26 218.9 30.4 332 103-478 698-1079(1082)
145 PLN02955 8-amino-7-oxononanoat 99.9 3.2E-21 7E-26 202.2 28.9 327 105-479 104-461 (476)
146 PLN02607 1-aminocyclopropane-1 99.9 3.4E-21 7.4E-26 204.8 29.0 345 103-480 48-438 (447)
147 PRK02769 histidine decarboxyla 99.9 2E-20 4.4E-25 194.3 34.0 316 116-478 36-371 (380)
148 cd06450 DOPA_deC_like DOPA dec 99.9 9.2E-22 2E-26 202.7 23.1 281 144-475 34-344 (345)
149 PRK07568 aspartate aminotransf 99.9 1.7E-20 3.6E-25 197.3 33.0 335 103-479 31-392 (397)
150 PRK01688 histidinol-phosphate 99.9 6.5E-22 1.4E-26 204.6 21.8 277 154-473 63-350 (351)
151 PLN02724 Molybdenum cofactor s 99.9 8.7E-21 1.9E-25 215.1 32.7 353 103-480 34-489 (805)
152 PRK06836 aspartate aminotransf 99.9 1.5E-20 3.2E-25 197.6 31.1 336 104-480 35-392 (394)
153 PRK06358 threonine-phosphate d 99.9 5.3E-21 1.1E-25 198.1 27.3 314 104-477 21-353 (354)
154 PRK14809 histidinol-phosphate 99.9 9.2E-21 2E-25 196.5 28.7 313 103-478 31-356 (357)
155 TIGR02379 ECA_wecE TDP-4-keto- 99.9 5.1E-21 1.1E-25 199.3 26.7 320 113-477 8-375 (376)
156 PRK05839 hypothetical protein; 99.9 9.6E-21 2.1E-25 197.6 28.8 325 103-478 25-373 (374)
157 PRK13237 tyrosine phenol-lyase 99.9 2.2E-20 4.7E-25 194.0 30.5 316 136-483 70-437 (460)
158 PRK07392 threonine-phosphate d 99.9 1.5E-20 3.3E-25 195.1 29.5 316 103-478 23-358 (360)
159 PRK05355 3-phosphoserine/phosp 99.9 4.3E-21 9.2E-26 198.7 25.1 333 104-479 4-358 (360)
160 TIGR03539 DapC_actino succinyl 99.9 9.7E-21 2.1E-25 196.4 27.4 314 103-473 22-356 (357)
161 PF01041 DegT_DnrJ_EryC1: DegT 99.9 3.5E-21 7.5E-26 200.1 24.0 315 116-474 5-363 (363)
162 TIGR01788 Glu-decarb-GAD gluta 99.9 3.7E-20 7.9E-25 195.0 31.6 338 112-478 51-428 (431)
163 PRK04635 histidinol-phosphate 99.9 4.7E-21 1E-25 198.5 24.4 275 155-475 67-351 (354)
164 PRK07908 hypothetical protein; 99.9 2.5E-20 5.4E-25 192.7 29.2 314 102-478 22-346 (349)
165 PRK03080 phosphoserine aminotr 99.9 8.1E-21 1.8E-25 198.3 25.6 327 104-479 13-373 (378)
166 PRK09257 aromatic amino acid a 99.9 7E-21 1.5E-25 200.2 24.5 330 102-476 26-395 (396)
167 PRK00451 glycine dehydrogenase 99.9 3.1E-20 6.7E-25 198.4 29.5 289 153-477 117-446 (447)
168 KOG2862 Alanine-glyoxylate ami 99.9 7.6E-20 1.6E-24 175.6 28.6 332 105-479 19-382 (385)
169 PF00155 Aminotran_1_2: Aminot 99.9 8.2E-21 1.8E-25 197.1 24.0 330 104-473 3-363 (363)
170 cd00609 AAT_like Aspartate ami 99.9 5.4E-20 1.2E-24 188.9 29.6 299 144-474 36-349 (350)
171 TIGR02618 tyr_phenol_ly tyrosi 99.9 2E-20 4.3E-25 193.8 26.1 317 135-483 62-430 (450)
172 PRK05937 8-amino-7-oxononanoat 99.9 4.1E-20 9E-25 192.6 28.9 319 108-480 9-351 (370)
173 PRK04781 histidinol-phosphate 99.9 2.4E-20 5.1E-25 193.9 26.9 284 154-477 65-361 (364)
174 COG1167 ARO8 Transcriptional r 99.9 2.8E-20 6E-25 198.4 27.6 303 146-480 134-456 (459)
175 PLN02397 aspartate transaminas 99.9 2.3E-20 5E-25 197.7 26.3 292 146-478 93-420 (423)
176 TIGR03542 DAPAT_plant LL-diami 99.9 1.3E-19 2.9E-24 190.8 31.7 332 103-476 34-401 (402)
177 PLN02414 glycine dehydrogenase 99.9 6.6E-20 1.4E-24 207.2 31.0 298 152-484 572-912 (993)
178 PLN03032 serine decarboxylase; 99.9 2.8E-19 6.1E-24 184.6 32.8 264 114-399 35-320 (374)
179 PRK06425 histidinol-phosphate 99.9 4E-20 8.6E-25 189.9 25.8 271 154-477 46-331 (332)
180 cd00615 Orn_deC_like Ornithine 99.9 4.9E-21 1.1E-25 193.3 16.3 220 153-391 64-293 (294)
181 PTZ00376 aspartate aminotransf 99.9 5E-20 1.1E-24 194.2 24.7 287 146-478 74-402 (404)
182 PRK15407 lipopolysaccharide bi 99.9 2E-19 4.2E-24 190.6 28.8 300 145-478 64-435 (438)
183 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 1.1E-19 2.4E-24 189.6 26.5 320 114-477 9-374 (375)
184 TIGR01364 serC_1 phosphoserine 99.9 1.4E-19 3E-24 186.5 26.7 325 113-478 2-347 (349)
185 cd00611 PSAT_like Phosphoserin 99.9 3.6E-20 7.9E-25 191.8 22.1 328 105-476 1-353 (355)
186 PRK09440 avtA valine--pyruvate 99.9 1.9E-19 4.1E-24 190.5 27.7 345 103-479 31-411 (416)
187 PRK05968 hypothetical protein; 99.9 5.7E-20 1.2E-24 192.4 22.9 290 142-479 61-386 (389)
188 PRK14808 histidinol-phosphate 99.9 2.8E-19 6E-24 183.8 27.2 303 102-475 19-333 (335)
189 TIGR01366 serC_3 phosphoserine 99.8 2E-19 4.3E-24 186.5 25.6 327 105-478 5-359 (361)
190 PRK06767 methionine gamma-lyas 99.8 1.1E-19 2.4E-24 190.2 23.3 291 142-478 59-384 (386)
191 TIGR01328 met_gam_lyase methio 99.8 2E-19 4.2E-24 188.4 24.6 218 142-396 57-281 (391)
192 PRK03967 histidinol-phosphate 99.8 5E-19 1.1E-23 182.1 26.9 306 103-478 19-333 (337)
193 KOG1360 5-aminolevulinate synt 99.8 1.1E-18 2.3E-23 172.3 25.9 335 105-480 173-525 (570)
194 PRK07811 cystathionine gamma-s 99.8 5.2E-19 1.1E-23 185.0 25.4 215 143-396 60-282 (388)
195 PLN02368 alanine transaminase 99.8 2.3E-19 5E-24 188.4 22.8 245 146-412 109-396 (407)
196 COG2008 GLY1 Threonine aldolas 99.8 4.4E-19 9.5E-24 175.7 22.5 320 109-477 5-341 (342)
197 PRK06234 methionine gamma-lyas 99.8 5.1E-19 1.1E-23 185.9 24.0 291 143-479 63-397 (400)
198 PRK04311 selenocysteine syntha 99.8 2.4E-18 5.2E-23 182.4 29.0 322 110-478 94-463 (464)
199 PRK07504 O-succinylhomoserine 99.8 4.6E-19 9.9E-24 186.0 23.3 216 143-396 64-286 (398)
200 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 4.7E-20 1E-24 190.5 15.0 265 153-435 71-400 (417)
201 PRK05367 glycine dehydrogenase 99.8 2.5E-18 5.4E-23 195.3 29.8 302 148-484 542-880 (954)
202 PRK05664 threonine-phosphate d 99.8 7.8E-19 1.7E-23 180.1 23.5 262 155-478 56-327 (330)
203 PLN02242 methionine gamma-lyas 99.8 1.5E-18 3.2E-23 182.8 25.6 224 142-401 74-305 (418)
204 PRK08045 cystathionine gamma-s 99.8 1.2E-18 2.6E-23 181.9 24.6 212 143-393 51-269 (386)
205 PRK08861 cystathionine gamma-s 99.8 3.3E-18 7.1E-23 178.3 27.7 290 142-480 51-384 (388)
206 PRK08133 O-succinylhomoserine 99.8 1.9E-18 4.1E-23 181.0 25.6 215 143-396 60-281 (390)
207 TIGR01329 cysta_beta_ly_E cyst 99.8 2.2E-18 4.7E-23 179.8 25.6 288 142-479 45-375 (378)
208 PRK07503 methionine gamma-lyas 99.8 2.1E-18 4.5E-23 181.4 25.4 217 143-396 64-287 (403)
209 TIGR01324 cysta_beta_ly_B cyst 99.8 1.6E-18 3.5E-23 180.3 23.6 291 141-478 47-375 (377)
210 PRK08776 cystathionine gamma-s 99.8 6.5E-18 1.4E-22 177.4 28.2 213 142-393 58-277 (405)
211 PRK06959 putative threonine-ph 99.8 1.8E-18 4E-23 178.0 23.4 265 154-480 59-334 (339)
212 PRK08574 cystathionine gamma-s 99.8 2.4E-18 5.1E-23 179.8 24.4 213 142-393 51-269 (385)
213 PRK15029 arginine decarboxylas 99.8 2.3E-18 5E-23 189.9 25.4 296 153-478 210-603 (755)
214 TIGR01140 L_thr_O3P_dcar L-thr 99.8 5E-18 1.1E-22 174.2 26.4 288 103-454 18-317 (330)
215 cd00614 CGS_like CGS_like: Cys 99.8 3.7E-18 7.9E-23 177.8 25.7 215 142-394 38-258 (369)
216 PRK08637 hypothetical protein; 99.8 4.2E-18 9E-23 178.7 25.5 276 171-478 71-385 (388)
217 PRK12566 glycine dehydrogenase 99.8 6E-18 1.3E-22 187.9 27.7 305 145-485 541-882 (954)
218 PRK08247 cystathionine gamma-s 99.8 4.2E-18 9.1E-23 177.1 25.1 284 142-478 50-363 (366)
219 PRK07810 O-succinylhomoserine 99.8 2.5E-18 5.3E-23 180.6 23.4 217 142-396 68-291 (403)
220 PRK08354 putative aminotransfe 99.8 1.3E-17 2.7E-22 169.8 27.5 291 103-476 9-309 (311)
221 PRK08249 cystathionine gamma-s 99.8 5.2E-18 1.1E-22 177.8 24.7 213 142-393 62-280 (398)
222 TIGR00474 selA seryl-tRNA(sec) 99.8 1.4E-17 3.1E-22 176.0 28.1 316 110-473 89-453 (454)
223 PRK08064 cystathionine beta-ly 99.8 6.1E-18 1.3E-22 177.2 24.8 213 142-393 52-270 (390)
224 KOG1359 Glycine C-acetyltransf 99.8 3.7E-18 8E-23 162.6 20.6 326 105-478 69-411 (417)
225 PRK07269 cystathionine gamma-s 99.8 4.3E-18 9.4E-23 176.4 23.1 228 142-411 52-287 (364)
226 PRK07050 cystathionine beta-ly 99.8 8.3E-18 1.8E-22 176.2 25.3 291 142-480 63-392 (394)
227 PLN02452 phosphoserine transam 99.8 2.9E-17 6.3E-22 169.6 28.2 334 103-478 7-362 (365)
228 TIGR00461 gcvP glycine dehydro 99.8 6.4E-17 1.4E-21 180.9 32.6 308 148-484 530-872 (939)
229 PLN02880 tyrosine decarboxylas 99.8 2.3E-17 4.9E-22 176.9 27.8 313 144-479 118-484 (490)
230 TIGR01325 O_suc_HS_sulf O-succ 99.8 9.5E-18 2.1E-22 175.2 24.2 212 143-393 53-270 (380)
231 TIGR03799 NOD_PanD_pyr putativ 99.8 4.4E-17 9.5E-22 175.2 29.4 307 144-472 125-518 (522)
232 PRK00854 rocD ornithine--oxo-a 99.8 5.7E-17 1.2E-21 170.8 29.4 317 114-478 58-400 (401)
233 PRK06460 hypothetical protein; 99.8 3.1E-17 6.7E-22 171.0 26.3 213 142-393 43-261 (376)
234 TIGR03531 selenium_SpcS O-phos 99.8 4.8E-17 1E-21 170.8 27.6 307 146-476 103-443 (444)
235 TIGR02080 O_succ_thio_ly O-suc 99.8 2.3E-17 5E-22 172.2 24.8 213 142-393 49-268 (382)
236 PRK09028 cystathionine beta-ly 99.8 2.4E-17 5.3E-22 171.7 24.5 212 143-393 60-277 (394)
237 PLN02509 cystathionine beta-ly 99.8 2.9E-17 6.4E-22 174.1 25.4 215 142-395 131-352 (464)
238 PRK07505 hypothetical protein; 99.8 3.5E-16 7.6E-21 164.9 32.6 331 104-479 48-399 (402)
239 PRK08114 cystathionine beta-ly 99.8 5.1E-17 1.1E-21 168.9 25.5 213 142-393 60-280 (395)
240 PRK07671 cystathionine beta-ly 99.8 4.4E-17 9.6E-22 169.8 24.1 215 142-395 48-269 (377)
241 PRK05613 O-acetylhomoserine am 99.8 5.1E-17 1.1E-21 171.7 24.5 161 142-328 67-233 (437)
242 TIGR00707 argD acetylornithine 99.8 9.6E-17 2.1E-21 167.6 26.2 311 114-476 44-378 (379)
243 PRK13578 ornithine decarboxyla 99.8 2.4E-17 5.3E-22 180.1 22.0 297 152-478 178-564 (720)
244 PRK06176 cystathionine gamma-s 99.8 1.7E-16 3.7E-21 165.5 27.4 213 142-393 48-266 (380)
245 PRK05939 hypothetical protein; 99.8 8.1E-17 1.7E-21 168.7 24.8 157 142-326 45-206 (397)
246 PRK06702 O-acetylhomoserine am 99.8 6.3E-17 1.4E-21 170.1 23.8 159 142-326 59-223 (432)
247 PRK07582 cystathionine gamma-l 99.8 8.4E-17 1.8E-21 167.2 24.4 282 143-478 50-364 (366)
248 PRK15399 lysine decarboxylase 99.8 1.8E-16 4E-21 173.1 27.3 290 153-478 200-558 (713)
249 PRK05967 cystathionine beta-ly 99.8 1.6E-16 3.5E-21 165.3 25.1 214 141-393 61-280 (395)
250 PLN02590 probable tyrosine dec 99.8 4.4E-16 9.5E-21 167.3 28.7 312 144-478 166-531 (539)
251 PRK06434 cystathionine gamma-l 99.8 1.2E-16 2.7E-21 166.0 23.7 211 142-393 62-278 (384)
252 PRK07812 O-acetylhomoserine am 99.8 1.5E-16 3.3E-21 168.0 24.5 153 142-320 67-222 (436)
253 PRK15400 lysine decarboxylase 99.8 6.4E-17 1.4E-21 176.7 21.9 292 152-478 199-558 (714)
254 PRK01278 argD acetylornithine 99.8 8.4E-16 1.8E-20 161.3 29.3 312 114-478 48-387 (389)
255 PRK08134 O-acetylhomoserine am 99.7 3.6E-16 7.8E-21 165.3 26.3 152 142-320 62-216 (433)
256 PRK06084 O-acetylhomoserine am 99.7 2.5E-16 5.5E-21 166.3 24.5 160 142-328 56-221 (425)
257 PRK08248 O-acetylhomoserine am 99.7 1.5E-16 3.3E-21 168.2 22.7 160 142-328 62-227 (431)
258 PLN02263 serine decarboxylase 99.7 1.5E-15 3.3E-20 159.4 29.7 289 146-478 131-442 (470)
259 PRK05994 O-acetylhomoserine am 99.7 2.8E-16 6.2E-21 166.2 24.5 156 144-326 63-224 (427)
260 PRK07049 methionine gamma-lyas 99.7 2.8E-16 6E-21 166.2 24.2 217 143-396 82-315 (427)
261 KOG1368 Threonine aldolase [Am 99.7 1.6E-16 3.5E-21 151.9 19.9 309 114-477 34-366 (384)
262 PRK04073 rocD ornithine--oxo-a 99.7 1.1E-15 2.3E-20 160.9 28.0 307 113-477 56-395 (396)
263 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 4.7E-16 1E-20 164.4 25.2 160 142-328 55-219 (418)
264 COG1003 GcvP Glycine cleavage 99.7 9.8E-16 2.1E-20 153.8 25.4 298 154-482 115-450 (496)
265 TIGR02617 tnaA_trp_ase tryptop 99.7 1.1E-15 2.3E-20 157.3 25.6 334 113-483 54-445 (467)
266 PRK03244 argD acetylornithine 99.7 3.7E-15 8.1E-20 156.9 30.1 311 115-479 61-394 (398)
267 cd00610 OAT_like Acetyl ornith 99.7 2.4E-15 5.2E-20 158.9 28.5 323 114-476 53-412 (413)
268 COG0076 GadB Glutamate decarbo 99.7 2.2E-15 4.7E-20 159.4 27.3 298 110-434 70-402 (460)
269 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 3.8E-16 8.2E-21 162.1 21.1 289 142-478 53-386 (386)
270 COG3844 Kynureninase [Amino ac 99.7 3.3E-15 7.2E-20 144.8 25.5 340 103-479 31-402 (407)
271 COG0626 MetC Cystathionine bet 99.7 1.6E-15 3.4E-20 155.8 24.2 217 142-396 61-286 (396)
272 KOG0256 1-aminocyclopropane-1- 99.7 1.8E-15 4E-20 150.6 23.8 281 171-478 148-460 (471)
273 TIGR01365 serC_2 phosphoserine 99.7 3.3E-15 7.1E-20 154.5 25.8 295 143-477 35-371 (374)
274 PRK02936 argD acetylornithine 99.7 5.2E-15 1.1E-19 154.6 26.7 314 113-477 45-377 (377)
275 COG1103 Archaea-specific pyrid 99.7 4.6E-15 1E-19 140.2 23.3 323 103-479 16-380 (382)
276 PRK02627 acetylornithine amino 99.7 1.1E-14 2.5E-19 153.0 28.3 310 115-478 57-393 (396)
277 PTZ00125 ornithine aminotransf 99.7 4.6E-14 1E-18 148.6 30.6 318 114-480 48-396 (400)
278 PRK05093 argD bifunctional N-s 99.7 3.4E-14 7.5E-19 149.8 28.6 309 113-479 56-400 (403)
279 TIGR01885 Orn_aminotrans ornit 99.7 5.6E-14 1.2E-18 148.1 30.1 310 114-477 54-400 (401)
280 TIGR03246 arg_catab_astC succi 99.7 4.5E-14 9.8E-19 148.5 28.2 310 114-479 52-395 (397)
281 KOG0633 Histidinol phosphate a 99.7 9.7E-15 2.1E-19 137.3 20.2 279 161-476 82-374 (375)
282 PRK12462 phosphoserine aminotr 99.7 3.7E-14 8.1E-19 145.2 26.3 335 103-478 4-361 (364)
283 cd01494 AAT_I Aspartate aminot 99.7 2.5E-15 5.4E-20 137.6 15.6 163 153-327 5-170 (170)
284 COG1982 LdcC Arginine/lysine/o 99.6 1.4E-14 3.1E-19 152.5 21.4 290 153-474 75-403 (557)
285 PF00282 Pyridoxal_deC: Pyrido 99.6 5.4E-14 1.2E-18 146.1 25.4 244 142-400 73-362 (373)
286 KOG1357 Serine palmitoyltransf 99.6 1.7E-14 3.6E-19 145.3 19.5 319 113-477 155-500 (519)
287 PLN02414 glycine dehydrogenase 99.6 1.3E-13 2.9E-18 156.4 29.0 309 113-475 116-465 (993)
288 PRK12381 bifunctional succinyl 99.6 1.8E-13 3.9E-18 144.4 25.8 317 114-479 56-399 (406)
289 COG1448 TyrB Aspartate/tyrosin 99.6 1.9E-13 4.1E-18 136.2 22.7 323 103-476 27-395 (396)
290 PRK04260 acetylornithine amino 99.6 7.8E-13 1.7E-17 138.2 28.5 307 115-476 46-374 (375)
291 PF01212 Beta_elim_lyase: Beta 99.6 5.9E-16 1.3E-20 154.8 4.6 252 110-400 4-277 (290)
292 TIGR00713 hemL glutamate-1-sem 99.6 1.7E-12 3.6E-17 137.9 30.5 324 103-478 49-421 (423)
293 PF06838 Met_gamma_lyase: Meth 99.6 6.1E-13 1.3E-17 132.0 24.7 246 145-426 55-328 (403)
294 PRK05367 glycine dehydrogenase 99.6 4.7E-13 1E-17 152.6 25.8 273 153-474 126-437 (954)
295 COG2873 MET17 O-acetylhomoseri 99.6 2E-13 4.3E-18 135.0 19.4 165 133-326 53-223 (426)
296 COG4992 ArgD Ornithine/acetylo 99.5 3.7E-12 8.1E-17 129.1 27.5 330 103-480 43-399 (404)
297 PLN02624 ornithine-delta-amino 99.5 9E-12 1.9E-16 133.8 30.5 318 114-480 92-445 (474)
298 COG3977 Alanine-alpha-ketoisov 99.5 1.1E-11 2.3E-16 119.3 26.3 342 104-478 32-410 (417)
299 KOG0634 Aromatic amino acid am 99.5 5.9E-12 1.3E-16 126.8 25.1 285 165-480 122-467 (472)
300 KOG0053 Cystathionine beta-lya 99.5 3.9E-13 8.5E-18 136.6 16.5 213 142-392 75-293 (409)
301 PRK03715 argD acetylornithine 99.5 1.4E-11 2.9E-16 129.5 28.4 313 114-479 53-393 (395)
302 PLN00144 acetylornithine trans 99.5 3.7E-11 8E-16 125.7 31.2 316 113-478 31-379 (382)
303 PRK08117 4-aminobutyrate amino 99.5 6.9E-11 1.5E-15 125.9 30.6 331 113-479 59-429 (433)
304 PRK08088 4-aminobutyrate amino 99.5 8.8E-11 1.9E-15 124.7 30.7 329 114-478 58-422 (425)
305 PRK04612 argD acetylornithine 99.4 1.2E-10 2.6E-15 122.7 29.6 323 113-480 56-404 (408)
306 TIGR03811 tyr_de_CO2_Ent tyros 99.4 5.7E-11 1.2E-15 129.3 25.4 234 143-394 118-476 (608)
307 PRK05964 adenosylmethionine--8 99.4 1.1E-10 2.5E-15 123.8 27.1 325 114-478 59-421 (423)
308 PRK00062 glutamate-1-semialdeh 99.4 1.3E-10 2.9E-15 123.3 27.5 327 103-478 51-423 (426)
309 PRK09792 4-aminobutyrate trans 99.4 6.7E-10 1.5E-14 117.7 31.5 328 113-478 56-420 (421)
310 PRK11522 putrescine--2-oxoglut 99.4 4.6E-10 9.9E-15 119.9 29.6 323 113-480 98-452 (459)
311 PRK04013 argD acetylornithine/ 99.4 4.8E-10 1E-14 116.2 28.5 304 113-479 40-360 (364)
312 COG0001 HemL Glutamate-1-semia 99.4 1.6E-09 3.4E-14 111.3 31.5 320 115-480 71-429 (432)
313 TIGR03372 putres_am_tran putre 99.4 7.7E-10 1.7E-14 117.4 30.2 320 113-477 91-442 (442)
314 PLN02760 4-aminobutyrate:pyruv 99.4 1.3E-09 2.7E-14 117.7 32.2 324 113-480 105-492 (504)
315 PRK08360 4-aminobutyrate amino 99.4 1.4E-09 2.9E-14 116.0 31.9 330 113-480 57-427 (443)
316 PRK12403 putative aminotransfe 99.4 9.1E-10 2E-14 117.8 30.5 321 113-480 70-453 (460)
317 COG1921 SelA Selenocysteine sy 99.3 6.6E-11 1.4E-15 120.0 19.9 228 110-371 35-273 (395)
318 KOG0258 Alanine aminotransfera 99.3 4.1E-10 8.9E-15 112.1 24.1 307 114-453 87-452 (475)
319 PRK06777 4-aminobutyrate amino 99.3 1.6E-09 3.5E-14 114.9 30.6 322 113-478 56-420 (421)
320 PRK07495 4-aminobutyrate amino 99.3 5.4E-09 1.2E-13 110.8 34.5 331 113-479 56-421 (425)
321 KOG2040 Glycine dehydrogenase 99.3 1.3E-10 2.8E-15 121.6 21.3 299 154-490 588-926 (1001)
322 PRK06058 4-aminobutyrate amino 99.3 8.2E-10 1.8E-14 117.8 28.2 329 113-478 72-441 (443)
323 TIGR00461 gcvP glycine dehydro 99.3 5E-10 1.1E-14 126.2 27.2 274 153-474 114-426 (939)
324 TIGR00700 GABAtrnsam 4-aminobu 99.3 1.5E-09 3.3E-14 115.1 29.6 326 113-478 49-419 (420)
325 KOG1383 Glutamate decarboxylas 99.3 1.7E-10 3.7E-15 117.5 21.0 269 146-435 118-413 (491)
326 PRK00615 glutamate-1-semialdeh 99.3 3.5E-09 7.5E-14 112.3 32.1 320 113-480 69-429 (433)
327 COG3033 TnaA Tryptophanase [Am 99.3 2.6E-10 5.6E-15 112.4 20.4 308 155-483 86-448 (471)
328 PRK09264 diaminobutyrate--2-ox 99.3 4.5E-09 9.7E-14 111.6 30.9 332 113-480 55-417 (425)
329 COG0160 GabT 4-aminobutyrate a 99.3 4.8E-09 1E-13 109.6 30.3 328 114-479 73-445 (447)
330 PRK08593 4-aminobutyrate amino 99.3 2.6E-09 5.7E-14 113.9 28.8 323 114-480 59-430 (445)
331 PF02347 GDC-P: Glycine cleava 99.3 7.8E-10 1.7E-14 114.9 23.5 278 153-473 115-429 (429)
332 PRK06105 aminotransferase; Pro 99.3 5.1E-09 1.1E-13 112.1 30.2 323 113-480 64-450 (460)
333 TIGR02407 ectoine_ectB diamino 99.3 7.1E-09 1.5E-13 109.6 30.9 323 113-478 51-411 (412)
334 PF03841 SelA: L-seryl-tRNA se 99.3 7.5E-12 1.6E-16 125.9 7.7 244 110-392 14-295 (367)
335 TIGR00508 bioA adenosylmethion 99.3 2.7E-09 6E-14 113.2 27.7 320 113-478 61-425 (427)
336 PRK07986 adenosylmethionine--8 99.3 2.2E-09 4.8E-14 113.7 26.7 319 113-478 59-422 (428)
337 PRK06918 4-aminobutyrate amino 99.3 4.7E-09 1E-13 112.3 29.4 187 268-480 242-444 (451)
338 PRK09221 beta alanine--pyruvat 99.3 6.2E-09 1.3E-13 111.0 29.9 322 113-478 65-442 (445)
339 PRK13360 omega amino acid--pyr 99.3 1.3E-08 2.9E-13 108.4 32.3 322 113-479 62-440 (442)
340 PRK06541 hypothetical protein; 99.3 7E-09 1.5E-13 111.0 30.1 215 241-479 208-455 (460)
341 PRK07046 aminotransferase; Val 99.3 8.5E-09 1.8E-13 110.1 30.5 314 114-479 92-450 (453)
342 KOG1358 Serine palmitoyltransf 99.3 4.9E-10 1.1E-14 111.6 19.2 331 108-478 99-464 (467)
343 PRK05769 4-aminobutyrate amino 99.2 1.2E-08 2.6E-13 108.8 31.3 200 251-479 221-439 (441)
344 PRK06173 adenosylmethionine--8 99.2 6.1E-09 1.3E-13 110.4 28.6 321 113-479 60-425 (429)
345 PRK06062 hypothetical protein; 99.2 3.3E-08 7.1E-13 105.6 32.1 321 113-480 69-446 (451)
346 PLN02482 glutamate-1-semialdeh 99.2 5.7E-08 1.2E-12 104.1 32.9 315 114-478 116-472 (474)
347 PRK06082 4-aminobutyrate amino 99.2 5.8E-08 1.3E-12 103.9 32.0 321 114-480 88-452 (459)
348 PRK07678 aminotransferase; Val 99.2 6.4E-08 1.4E-12 103.5 31.6 325 113-478 63-448 (451)
349 PRK06149 hypothetical protein; 99.1 3.3E-08 7.1E-13 115.0 31.1 327 114-479 600-970 (972)
350 COG4100 Cystathionine beta-lya 99.1 3.2E-09 7E-14 102.4 18.7 227 146-399 67-313 (416)
351 TIGR00709 dat 2,4-diaminobutyr 99.1 2.7E-08 5.9E-13 106.1 28.1 203 251-479 206-435 (442)
352 PRK05965 hypothetical protein; 99.1 4.5E-08 9.8E-13 104.8 29.5 329 114-479 63-447 (459)
353 COG1932 SerC Phosphoserine ami 99.1 5.4E-09 1.2E-13 104.3 20.6 333 104-478 6-362 (365)
354 PRK05630 adenosylmethionine--8 99.1 5E-08 1.1E-12 103.4 29.4 208 241-478 191-419 (422)
355 PRK06209 glutamate-1-semialdeh 99.1 4E-08 8.7E-13 104.5 28.5 310 113-480 64-406 (431)
356 PRK12389 glutamate-1-semialdeh 99.1 8.9E-08 1.9E-12 101.8 30.8 307 114-478 70-426 (428)
357 COG0403 GcvP Glycine cleavage 99.1 8E-08 1.7E-12 97.5 27.4 285 153-476 125-447 (450)
358 PRK05639 4-aminobutyrate amino 99.1 2.3E-07 4.9E-12 99.3 31.3 331 113-480 69-444 (457)
359 PRK06943 adenosylmethionine--8 99.1 2.3E-07 5.1E-12 99.1 31.1 321 113-479 70-446 (453)
360 PF12897 Aminotran_MocR: Alani 99.1 9.6E-08 2.1E-12 96.1 25.3 342 103-480 23-416 (425)
361 PRK06938 diaminobutyrate--2-ox 99.1 1.3E-07 2.7E-12 101.4 28.2 216 239-480 214-461 (464)
362 PRK07481 hypothetical protein; 99.0 2.2E-07 4.7E-12 99.4 29.5 201 251-479 213-445 (449)
363 PRK07482 hypothetical protein; 99.0 1.8E-07 3.9E-12 100.3 28.7 215 239-479 205-454 (461)
364 PRK07480 putative aminotransfe 99.0 5.4E-07 1.2E-11 96.5 31.5 213 241-480 206-449 (456)
365 PRK07483 hypothetical protein; 99.0 2.6E-07 5.7E-12 98.5 28.8 220 241-480 186-438 (443)
366 PRK08742 adenosylmethionine--8 99.0 4.9E-07 1.1E-11 97.0 30.9 213 240-480 223-468 (472)
367 PRK06916 adenosylmethionine--8 99.0 2.5E-07 5.5E-12 99.1 28.6 321 113-479 72-455 (460)
368 PRK06148 hypothetical protein; 99.0 3.8E-07 8.3E-12 106.4 31.4 322 114-479 639-1010(1013)
369 KOG0628 Aromatic-L-amino-acid/ 99.0 1E-07 2.2E-12 97.3 22.5 316 142-480 107-472 (511)
370 PRK06917 hypothetical protein; 99.0 4.9E-07 1.1E-11 96.5 28.4 330 113-480 47-438 (447)
371 PRK06931 diaminobutyrate--2-ox 99.0 2.2E-06 4.8E-11 91.8 33.2 187 268-480 248-455 (459)
372 PRK07030 adenosylmethionine--8 98.9 1.2E-06 2.6E-11 94.0 29.9 213 240-480 201-447 (466)
373 PRK07036 hypothetical protein; 98.9 1.1E-06 2.4E-11 94.2 29.0 213 241-480 207-453 (466)
374 KOG1402 Ornithine aminotransfe 98.9 1.3E-06 2.8E-11 85.8 25.4 317 114-477 76-425 (427)
375 TIGR00699 GABAtrns_euk 4-amino 98.9 7.7E-07 1.7E-11 94.9 26.1 209 239-477 237-464 (464)
376 PF05889 SLA_LP_auto_ag: Solub 98.9 5.2E-08 1.1E-12 99.2 16.0 315 141-478 49-389 (389)
377 COG0161 BioA Adenosylmethionin 98.9 2.5E-06 5.5E-11 88.9 28.3 211 240-480 200-444 (449)
378 TIGR03251 LAT_fam L-lysine 6-t 98.9 2.1E-06 4.4E-11 91.5 28.1 209 240-475 205-430 (431)
379 KOG0629 Glutamate decarboxylas 98.8 1E-07 2.2E-12 96.2 14.8 237 148-400 141-421 (510)
380 KOG1412 Aspartate aminotransfe 98.8 6.4E-07 1.4E-11 87.2 18.2 275 170-479 101-405 (410)
381 PRK12566 glycine dehydrogenase 98.8 2.2E-06 4.8E-11 96.6 25.1 274 153-474 129-439 (954)
382 KOG1404 Alanine-glyoxylate ami 98.7 1.6E-06 3.5E-11 87.1 21.1 182 267-473 234-432 (442)
383 PRK08297 L-lysine aminotransfe 98.7 7.6E-06 1.7E-10 87.3 28.0 211 240-478 212-440 (443)
384 KOG3846 L-kynurenine hydrolase 98.7 1.1E-06 2.3E-11 85.4 17.3 340 112-480 77-462 (465)
385 KOG1411 Aspartate aminotransfe 98.7 9.2E-07 2E-11 87.3 16.6 351 81-478 29-424 (427)
386 PLN02974 adenosylmethionine-8- 98.6 2E-05 4.3E-10 89.4 28.0 213 241-477 567-816 (817)
387 KOG1401 Acetylornithine aminot 98.5 5.3E-05 1.1E-09 76.9 23.4 250 113-392 72-347 (433)
388 PF00202 Aminotran_3: Aminotra 98.3 5.3E-05 1.2E-09 78.1 19.6 256 113-392 32-315 (339)
389 KOG1403 Predicted alanine-glyo 98.2 0.00055 1.2E-08 66.8 22.3 339 103-479 51-437 (452)
390 PF04864 Alliinase_C: Allinase 98.1 3.4E-05 7.3E-10 77.0 13.0 281 146-476 45-362 (363)
391 KOG2790 Phosphoserine aminotra 97.8 0.0011 2.5E-08 64.2 15.7 329 103-478 7-367 (370)
392 KOG1405 4-aminobutyrate aminot 97.7 0.0016 3.6E-08 64.9 15.5 207 240-478 255-482 (484)
393 KOG2040 Glycine dehydrogenase 97.3 0.0082 1.8E-07 64.4 15.8 279 154-474 169-478 (1001)
394 PLN02994 1-aminocyclopropane-1 97.1 0.0011 2.3E-08 60.1 6.6 56 146-203 94-152 (153)
395 KOG3843 Predicted serine hydro 95.9 0.15 3.2E-06 49.3 12.6 112 236-355 139-262 (432)
396 PF04131 NanE: Putative N-acet 67.5 15 0.00033 34.2 6.1 72 237-314 51-122 (192)
397 COG3010 NanE Putative N-acetyl 61.5 19 0.0004 34.1 5.4 72 237-314 85-157 (229)
398 PRK12595 bifunctional 3-deoxy- 57.6 25 0.00055 36.5 6.4 57 235-291 232-299 (360)
399 PRK13397 3-deoxy-7-phosphohept 56.5 28 0.0006 34.2 6.0 58 235-292 129-197 (250)
400 KOG0630 Predicted pyridoxal-de 55.4 1.6E+02 0.0034 31.7 11.5 91 236-328 272-375 (838)
401 COG1504 Uncharacterized conser 51.6 31 0.00066 29.1 4.6 49 236-285 47-95 (121)
402 cd02067 B12-binding B12 bindin 51.3 42 0.00092 28.4 5.9 43 237-279 36-78 (119)
403 TIGR01361 DAHP_synth_Bsub phos 51.2 37 0.0008 33.5 6.1 57 235-291 139-206 (260)
404 PRK13396 3-deoxy-7-phosphohept 49.7 36 0.00077 35.2 5.9 58 235-292 215-284 (352)
405 cd05126 Mth938 Mth938 domain. 47.7 58 0.0013 27.9 6.0 49 237-286 45-93 (117)
406 PRK02261 methylaspartate mutas 46.8 58 0.0012 28.7 6.1 51 223-278 31-81 (137)
407 PF02310 B12-binding: B12 bind 46.0 39 0.00085 28.5 4.8 52 238-289 38-91 (121)
408 cd00248 Mth938-like Mth938-lik 45.6 1.3E+02 0.0029 25.2 7.9 50 236-286 37-86 (109)
409 cd02072 Glm_B12_BD B12 binding 44.6 52 0.0011 28.8 5.3 53 223-280 27-79 (128)
410 COG1105 FruK Fructose-1-phosph 44.6 58 0.0012 33.0 6.3 53 235-287 108-167 (310)
411 KOG4759 Ribosome recycling fac 43.9 1.9E+02 0.0041 28.4 9.4 86 419-524 156-245 (263)
412 COG2870 RfaE ADP-heptose synth 43.8 66 0.0014 33.7 6.6 69 217-285 107-177 (467)
413 TIGR01501 MthylAspMutase methy 39.8 63 0.0014 28.5 5.1 54 222-280 28-81 (134)
414 COG4566 TtrR Response regulato 39.0 1.8E+02 0.0038 27.4 8.0 50 383-432 17-77 (202)
415 TIGR02026 BchE magnesium-proto 37.7 68 0.0015 34.9 6.1 54 236-290 48-103 (497)
416 cd02071 MM_CoA_mut_B12_BD meth 37.0 83 0.0018 26.9 5.4 50 224-278 28-77 (122)
417 TIGR02370 pyl_corrinoid methyl 36.9 83 0.0018 29.6 5.9 60 222-286 111-174 (197)
418 cd02070 corrinoid_protein_B12- 35.6 85 0.0018 29.5 5.8 60 222-286 109-172 (201)
419 TIGR00496 frr ribosome recycli 34.8 3.4E+02 0.0074 25.1 9.4 49 419-480 67-115 (176)
420 TIGR03586 PseI pseudaminic aci 32.4 1.2E+02 0.0025 31.2 6.4 56 235-292 141-205 (327)
421 cd00520 RRF Ribosome recycling 32.3 3.8E+02 0.0082 24.8 9.3 49 419-480 72-120 (179)
422 cd00984 DnaB_C DnaB helicase C 32.2 1.3E+02 0.0028 28.7 6.7 48 237-284 105-168 (242)
423 cd02069 methionine_synthase_B1 31.7 1E+02 0.0022 29.4 5.6 59 222-285 115-175 (213)
424 smart00642 Aamy Alpha-amylase 30.6 39 0.00084 30.9 2.4 27 261-287 65-91 (166)
425 PRK13398 3-deoxy-7-phosphohept 29.5 82 0.0018 31.2 4.7 57 235-291 141-208 (266)
426 cd05560 Xcc1710_like Xcc1710_l 29.2 1.7E+02 0.0038 24.6 6.0 49 236-286 38-86 (109)
427 PRK00083 frr ribosome recyclin 28.3 4.7E+02 0.01 24.4 9.2 49 419-480 76-124 (185)
428 TIGR00640 acid_CoA_mut_C methy 26.7 1.6E+02 0.0034 25.8 5.5 53 222-279 29-81 (132)
429 PF01904 DUF72: Protein of unk 26.5 2E+02 0.0043 27.7 6.7 71 408-478 121-202 (230)
430 PF14639 YqgF: Holliday-juncti 26.2 52 0.0011 29.6 2.4 43 237-279 49-91 (150)
431 TIGR03275 methan_mark_8 putati 25.6 24 0.00052 34.1 0.1 81 232-317 143-224 (259)
432 PF00128 Alpha-amylase: Alpha 25.6 38 0.00082 33.5 1.6 28 260-287 46-73 (316)
433 COG1091 RfbD dTDP-4-dehydrorha 25.3 3.8E+02 0.0083 26.8 8.5 47 237-284 36-97 (281)
434 PF03437 BtpA: BtpA family; I 24.8 93 0.002 30.6 4.0 71 239-314 159-231 (254)
435 COG3414 SgaB Phosphotransferas 24.0 1.7E+02 0.0036 24.0 4.8 70 253-328 3-75 (93)
436 COG3964 Predicted amidohydrola 22.9 2.6E+02 0.0057 28.3 6.6 50 236-286 136-192 (386)
437 TIGR00789 flhB_rel flhB C-term 22.7 68 0.0015 25.7 2.2 20 268-287 29-48 (82)
438 PRK09441 cytoplasmic alpha-amy 22.6 59 0.0013 35.2 2.4 28 260-287 75-102 (479)
439 COG2515 Acd 1-aminocyclopropan 22.5 6.3E+02 0.014 25.6 9.2 54 141-199 160-214 (323)
440 TIGR01769 GGGP geranylgeranylg 22.1 1.3E+02 0.0029 28.5 4.4 53 231-284 5-58 (205)
441 smart00481 POLIIIAc DNA polyme 21.9 3.4E+02 0.0073 20.1 6.3 47 236-284 13-59 (67)
442 PF02603 Hpr_kinase_N: HPr Ser 21.7 1.2E+02 0.0027 26.2 3.8 44 237-285 64-111 (127)
443 COG0233 Frr Ribosome recycling 20.7 7E+02 0.015 23.3 9.5 47 419-478 78-124 (187)
444 PF01248 Ribosomal_L7Ae: Ribos 20.6 1.8E+02 0.0039 23.4 4.5 44 240-285 20-64 (95)
445 PRK13602 putative ribosomal pr 20.5 1.6E+02 0.0035 23.3 4.0 44 240-285 16-59 (82)
446 TIGR01768 GGGP-family geranylg 20.3 2.2E+02 0.0049 27.4 5.6 46 238-284 15-60 (223)
No 1
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-109 Score=801.40 Aligned_cols=452 Identities=69% Similarity=1.120 Sum_probs=437.0
Q ss_pred chhhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 009673 77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (529)
Q Consensus 77 ~~~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~ 156 (529)
.+.+.+|.+.|||+++++++|+.||+.+|+||+|||+++.+|+||++++|+|||+|||||.|||+|++++|++|.+|++|
T Consensus 15 ~~~~~~l~~~DPev~~ii~~Ek~RQ~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~R 94 (477)
T KOG2467|consen 15 KLGNTPLEEVDPEVHDIIEKEKERQKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKR 94 (477)
T ss_pred hhhcCchhhcChHHHHHHHHHHHhhhcceeEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHH
Confidence 55678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC
Q 009673 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (529)
Q Consensus 157 la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~ 236 (529)
+.+.||++++.|+||||+.|||.||+++++++++|||+||.+|+++|||++|||++..+++++.+.+|+..||.+|+++|
T Consensus 95 ALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG 174 (477)
T KOG2467|consen 95 ALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTG 174 (477)
T ss_pred HHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccc
Q 009673 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 316 (529)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l 316 (529)
.||||.||+.+..+|||+||++.|.|++.+|++++++||++.|+++++|+||.+|+++.++.++||++||||++|+||+|
T Consensus 175 ~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTHKsL 254 (477)
T KOG2467|consen 175 YIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTHKSL 254 (477)
T ss_pred ceehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEeeCCC---------cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 009673 317 RGPRGGMIFFKKDP---------VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA 387 (529)
Q Consensus 317 ~GprgG~i~~~~~~---------~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~ 387 (529)
+|||||+|+++++. ...+++.++|++++||++||+||+|.|+|+|+||+++.+++|++|++|+++|++.|+
T Consensus 255 RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala 334 (477)
T KOG2467|consen 255 RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALA 334 (477)
T ss_pred cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999863 146899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673 388 SRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 467 (529)
Q Consensus 388 ~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~ 467 (529)
++|.++|+.++++|||+|+++||+++.|+|+..+++.|+..+|.+|+|++|||.+++.|+|||||+|++|+||+.|+||+
T Consensus 335 ~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~ 414 (477)
T KOG2467|consen 335 SALISRGYKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFE 414 (477)
T ss_pred HHHHHcCceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 009673 468 AIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529 (529)
Q Consensus 468 ~la~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 529 (529)
+++++|.++++++.++|...++++++||++.+.++.. ..+++.+||++|++|+.+||+|+|
T Consensus 415 ~v~~fi~~av~i~~~~~~~~~~~~lkdf~~~~~~~~~-~~~~v~~Lr~~Ve~fa~~fp~pg~ 475 (477)
T KOG2467|consen 415 KVADFIDRAVKIALEIQKEAGGKKLKDFKKFLSENKV-MSEEVAELRKRVEEFAGQFPMPGF 475 (477)
T ss_pred HHHHHHHHHHHHHHHHHhhcccchHHHHHHHhccCch-hHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999998877999999999876541 124789999999999999999996
No 2
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.7e-97 Score=727.18 Aligned_cols=408 Identities=56% Similarity=0.857 Sum_probs=394.0
Q ss_pred hhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673 81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (529)
Q Consensus 81 ~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~ 160 (529)
..+...||++++++.+|..||++.|+||||||++|+.|++|++|.|+|||+|||||.|||+||+++|++|.+|+++++++
T Consensus 5 ~~l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L 84 (413)
T COG0112 5 ASLADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL 84 (413)
T ss_pred hhHHhcCHHHHHHHHHHHHHHhhceeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence 56778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCH
Q 009673 161 FNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240 (529)
Q Consensus 161 ~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~ 240 (529)
||++. +||||+||+.||.+++.+|++|||+||.+++.||||+|||. +++++|.+|++++|++|++++.||+
T Consensus 85 Fga~~----anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~-----~v~~sG~~~~~v~Y~vd~et~~IDy 155 (413)
T COG0112 85 FGAEY----ANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGS-----PVNFSGKLFNVVSYGVDPETGLIDY 155 (413)
T ss_pred hCCCc----cccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCC-----CCCccceeEEeEecccccccCccCH
Confidence 99997 69999999999999999999999999999999999999995 6889999999999999999999999
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCC
Q 009673 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPR 320 (529)
Q Consensus 241 d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gpr 320 (529)
|++++++.++|||+||++.|.|++.+|++++++||+++|++|++|+||++||++.|.+++|+++||||++|+||||+|||
T Consensus 156 D~~~k~a~e~kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPr 235 (413)
T COG0112 156 DEVEKLAKEVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPR 235 (413)
T ss_pred HHHHHHHHHhCCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC
Q 009673 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG 400 (529)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~ 400 (529)
||+|+++++ ++.++|++++||+.||+|++|.|||.++|++++++++|++|++++++|++.|++.|.+.|++++++
T Consensus 236 GG~Il~~~e-----el~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsG 310 (413)
T COG0112 236 GGIILTNDE-----ELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSG 310 (413)
T ss_pred ceEEEeccH-----HHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecC
Confidence 999999985 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 401 GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 401 gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
+|++|++++|+++.++++..++..|++.||.+|+|.+|+|. +|+.++|||||++++|+|||.++||++++++|.+++..
T Consensus 311 gTdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 311 GTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred CccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 99999999999987899999999999999999999999997 89999999999999999999999999999999999974
Q ss_pred HHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCC
Q 009673 480 TLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 528 (529)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~ 528 (529)
.. . .++++|++|.+||++||++.
T Consensus 391 ~~---------------------~-----~~~~vk~~V~~l~~~fp~y~ 413 (413)
T COG0112 391 LK---------------------D-----VPAEVKEEVAELCRRFPLYK 413 (413)
T ss_pred cc---------------------h-----hHHHHHHHHHHHHHhCCCCC
Confidence 31 1 47899999999999999874
No 3
>PLN02271 serine hydroxymethyltransferase
Probab=100.00 E-value=2e-92 Score=737.56 Aligned_cols=445 Identities=56% Similarity=0.978 Sum_probs=418.8
Q ss_pred hhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 009673 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (529)
Q Consensus 79 ~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la 158 (529)
.++.|.+.||++++++.+|..||+++|+||||||++|+.|++++++.|+|+|++||||.|||+|++++|++|.+|+++++
T Consensus 125 ~~~~l~~~Dpei~~li~~E~~rQ~~~l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~ 204 (586)
T PLN02271 125 GNQPLPEADPDIHELMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERAL 204 (586)
T ss_pred HhccHhhhCHHHHHHHHHHHHHHhcCeeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHH
Confidence 44578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccc-ccccccccceEEEEEcccCCCCCC
Q 009673 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP-KRRVSGTSIYFESMPYRLDESTGL 237 (529)
Q Consensus 159 ~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~-~~~i~~~g~~~~~v~~~v~~~~~~ 237 (529)
++||+++++|++|||+.||+.||++++.+|++|||+||.++++||||++|+++.. .+.++..|.++++++|++|++++.
T Consensus 205 ~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~ 284 (586)
T PLN02271 205 AAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGY 284 (586)
T ss_pred HHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCc
Confidence 9999999999999999999999999999999999999999999999999997542 235678899999999999888899
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccccccc
Q 009673 238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLR 317 (529)
Q Consensus 238 iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~ 317 (529)
+|+|++++.+..++||+|+++.+.|++.+|+++|++||+++|++|++|+||.+|+++.+.+++|+.++|++++|+||||+
T Consensus 285 IDyd~lek~a~~~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLr 364 (586)
T PLN02271 285 IDYDKLEEKALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLR 364 (586)
T ss_pred cCHHHHHHHhhhcCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccCC
Confidence 99999999777779999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEeeCCC--------------cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673 318 GPRGGMIFFKKDP--------------VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (529)
Q Consensus 318 GprgG~i~~~~~~--------------~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a 383 (529)
|||||+|+++++. ...+++.++|++++||++||+|+++.|||++++++++..++|++|++|+++|+
T Consensus 365 GPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NA 444 (586)
T PLN02271 365 GPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNA 444 (586)
T ss_pred CCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 9999999998641 01346889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCH
Q 009673 384 RALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE 463 (529)
Q Consensus 384 ~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~ 463 (529)
+.|++.|.+.|+++++++|++|++++|+++.++++..+++.|+++||.+|++.+|++.+++.++|||||++++|+||+.|
T Consensus 445 kaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e 524 (586)
T PLN02271 445 QALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLE 524 (586)
T ss_pred HHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 009673 464 KEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529 (529)
Q Consensus 464 ~d~~~la~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 529 (529)
+||++++++|.+++++.+++|++. |+++++|++.+.++. .+.+||++|++||++||+|+|
T Consensus 525 ~d~~~iA~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~i~~l~~~V~~~~~~fp~p~~ 584 (586)
T PLN02271 525 SDFETIADFLLRAAQIASAVQREH-GKLQKEFLKGLQNNK-----DIVELRNRVEAFASQFAMPGF 584 (586)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhc-chhhhhhhhccCCHH-----HHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999998888876 788899988886543 789999999999999999975
No 4
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=100.00 E-value=3.6e-83 Score=654.73 Aligned_cols=391 Identities=58% Similarity=0.961 Sum_probs=331.9
Q ss_pred cccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC
Q 009673 83 LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 162 (529)
Q Consensus 83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g 162 (529)
|++.||++++++++|..||+++|+|+||||++||.|++++++.|+|+|++||||.|||+|++++|++|.+|+++++++||
T Consensus 1 l~~~d~ei~~li~~e~~rq~~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~ 80 (399)
T PF00464_consen 1 LKEFDPEIYELIEKEEERQRSTLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG 80 (399)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHSEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHHHHHHhcCccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHH
Q 009673 163 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM 242 (529)
Q Consensus 163 ~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~ 242 (529)
+++++|.+||++.||+.||++++.+|++|||+||.+++.+|||++||+....+++...|.+|++++|++|++++.||+|+
T Consensus 81 ~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~ 160 (399)
T PF00464_consen 81 AEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDE 160 (399)
T ss_dssp -STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHH
T ss_pred CCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHH
Confidence 99999999999999999999999999999999999999999999999876656667788899999999998899999999
Q ss_pred HHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCe
Q 009673 243 LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322 (529)
Q Consensus 243 le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG 322 (529)
+++++++++||+|+++.|+||+.+|+++|++||++.|++|++|++|.+|+|+.|.+++|++++|++++||||+|+|||||
T Consensus 161 l~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrgg 240 (399)
T PF00464_consen 161 LEKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRGG 240 (399)
T ss_dssp HHHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS-E
T ss_pred HHHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCCC--------cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC
Q 009673 323 MIFFKKDP--------VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG 394 (529)
Q Consensus 323 ~i~~~~~~--------~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G 394 (529)
+|+++++. ...+++.++|++++||+.||+|+++.++|++++|+++.+++|++|.+++++|++.|++.|.+.|
T Consensus 241 iI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G 320 (399)
T PF00464_consen 241 IILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERG 320 (399)
T ss_dssp EEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999211 0113899999999999999999999999999999999888999999999999999999999999
Q ss_pred cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673 395 YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473 (529)
Q Consensus 395 ~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i 473 (529)
+++++++|++|++++|+++.++++.++++.|+++||.+|++.+|+|.+++.++||||||+++|+||+.++||++++++|
T Consensus 321 ~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 321 FKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp -EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred cEEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhhC
Confidence 9999999999999999998889999999999999999999999999888889999999999999999999999999986
No 5
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=5.3e-74 Score=609.58 Aligned_cols=449 Identities=71% Similarity=1.156 Sum_probs=407.1
Q ss_pred hhhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 009673 78 FVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (529)
Q Consensus 78 ~~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~l 157 (529)
+....|.+.||+++++|.+|..||+++|+||||||++|+.|++++++.++++|++|+||+|||+|++++|++|++|++++
T Consensus 10 ~~~~~~~~~d~~~~~~i~~e~~~q~~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~ 89 (475)
T PLN03226 10 WGNAPLEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRA 89 (475)
T ss_pred cchhhhhhcCHHHHHHHHHHHHHHHcCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHH
Confidence 45566889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCC
Q 009673 158 LAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL 237 (529)
Q Consensus 158 a~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~ 237 (529)
+++|+.+.+.|.+||+++||+.||.+++.+|++|||+|+.++.+++||++|++......++..+.++++++|+++++++.
T Consensus 90 ~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~ 169 (475)
T PLN03226 90 LEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGL 169 (475)
T ss_pred HHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCC
Confidence 99999999888889999999999999999999999999999999999999997554444566677778888888878899
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccccccc
Q 009673 238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLR 317 (529)
Q Consensus 238 iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~ 317 (529)
+|+++|++++..++||+|+++.++++...|+++|+++|+++|+++++|+||++|++..+..++|++++|++++|+||||+
T Consensus 170 iD~d~Le~~l~~~~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~ 249 (475)
T PLN03226 170 IDYDKLEKKAMLFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLR 249 (475)
T ss_pred cCHHHHHHHHhhcCCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCccccc
Confidence 99999999998778999988888899999999999999999999999999999999888888888899999999999999
Q ss_pred CCCCeEEEeeCCCc--------chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 009673 318 GPRGGMIFFKKDPV--------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 389 (529)
Q Consensus 318 GprgG~i~~~~~~~--------~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~ 389 (529)
||+||+|+++++.. .+.++.+.++...+|+++|+|+++.++++++|++++...+++++.+++.+|+++|++.
T Consensus 250 GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~ 329 (475)
T PLN03226 250 GPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANR 329 (475)
T ss_pred CCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHH
Confidence 99999999987421 1124555778888899999999999999999999998888999999999999999999
Q ss_pred HHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673 390 LVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 469 (529)
Q Consensus 390 L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~l 469 (529)
|.+.|++++++++++|++++++++.++++.++.+.|+++||.++++.+|++.++..+++||+|++++|+||++++||+++
T Consensus 330 L~~~G~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~i 409 (475)
T PLN03226 330 LMSKGYKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKV 409 (475)
T ss_pred HHhCCCEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHH
Confidence 99999999998888999999998888999999999999999999999999888888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 009673 470 ADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529 (529)
Q Consensus 470 a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 529 (529)
+++|.++++....+++++ ++++++|...++.+.. ...+++||++|.+||++||+|++
T Consensus 410 a~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~fp~~~~ 466 (475)
T PLN03226 410 AEFLHRAVTIALKIQKEH-GKKLKDFKKGLESNDF--SKDIEALRAEVEEFATSFPMPGF 466 (475)
T ss_pred HHHHHHHHHHhhhhhhhc-ccchhhhhhhcccccc--HHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999888887775 7888998766643310 03689999999999999999974
No 6
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=4.4e-73 Score=591.88 Aligned_cols=424 Identities=42% Similarity=0.706 Sum_probs=381.5
Q ss_pred hhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673 81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (529)
Q Consensus 81 ~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~ 160 (529)
..|.+.||+++++|++|..||+++|+||||||++|+.|++++++.++|+|++||||.|||+|++++|++|.+|.++++++
T Consensus 28 ~~l~~~d~~~~~~~~~e~~rq~~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~l 107 (493)
T PRK13580 28 DVILHVEPRIAEAIRQELADQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKEL 107 (493)
T ss_pred HHHHhhCHHHHHHHHHHHHHHhcCceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCceeeecCChHHHHHHHHHhhcCC-------------------------------CCEEEEcCCCCCcccccc
Q 009673 161 FNLDENKWGVNVQPLSGSPANFEVYTAILKP-------------------------------HDRIMGLDLPHGGHLSHG 209 (529)
Q Consensus 161 ~g~~~~~~~~~V~~~sGs~A~~~~l~all~p-------------------------------GD~Vl~~~~~~~g~~s~g 209 (529)
||+++ +|||+.||+.||++++.++++| ||+||.+++.+|||++|+
T Consensus 108 f~a~~----anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg 183 (493)
T PRK13580 108 FGAEH----AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG 183 (493)
T ss_pred hCCCc----ccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC
Confidence 99998 6999999999999999999987 899999999999999999
Q ss_pred ccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccc
Q 009673 210 FMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHI 289 (529)
Q Consensus 210 ~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~ 289 (529)
+ ..++.+.++++++|+++++++.+|++++++++++++|++++++.|++++..|+++|++||+++|+++++|+||+
T Consensus 184 ~-----~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~AH~ 258 (493)
T PRK13580 184 F-----RPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAHF 258 (493)
T ss_pred c-----ccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEECchh
Confidence 6 45778888999999999778999999999999997788888889999999999999999999999999999999
Q ss_pred cccccccccC---CCCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHH
Q 009673 290 SGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (529)
Q Consensus 290 ~Gli~~~~~~---~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~ 366 (529)
+|++..+..+ +++.++||+++|+||+|+||+||+|++++ ++.+.++++ .|+++|+|+.+.++|+++++.+
T Consensus 259 ~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~GG~I~~~~------~l~~~L~~a-~P~i~gg~l~p~iAA~avAl~e 331 (493)
T PRK13580 259 AGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKK------EYADAVDKG-CPLVLGGPLPHVMAAKAVALAE 331 (493)
T ss_pred hceeccccchhhcCCCCCCcEEEeCChhhccCCCeEEEEecH------HHHHHHhhC-CCcccCCCccHHHHHHHHHHHH
Confidence 9999866644 56668999999999999999999999998 788888776 4889999999999999999999
Q ss_pred hcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCC
Q 009673 367 AQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALV 445 (529)
Q Consensus 367 ~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~ 445 (529)
+.++++++|++++++|+++|++.|.+.|++++.+++++|++++++.+.+.++..+.+.|+++||.++++.+|.+. +++.
T Consensus 332 ~~~~ef~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~ 411 (493)
T PRK13580 332 ARTPEFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWY 411 (493)
T ss_pred HhCccHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCC
Confidence 887778899999999999999999999999987778999999999876656678889999999999999999875 5567
Q ss_pred CCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCC
Q 009673 446 PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFP 525 (529)
Q Consensus 446 ~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p 525 (529)
+++||||++++|+||++++||++++++|.++++.....+.. .|+++++ +...++ ..++++|++|.+||++||
T Consensus 412 ~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~~~~~~~-~~~~~~~--~~~~~~-----~~~~~~~~~v~~~~~~~p 483 (493)
T PRK13580 412 TSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNTTPGTTA-EGAPSKA--KYELDE-----GVAQEVRARVAELLARFP 483 (493)
T ss_pred CceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhhhhcccc-ccccccc--cccCCH-----HHHHHHHHHHHHHHHhCC
Confidence 89999999999999999999999999999998765333222 3666665 222222 368899999999999999
Q ss_pred C-CC
Q 009673 526 I-PG 528 (529)
Q Consensus 526 ~-~~ 528 (529)
+ |+
T Consensus 484 ~~~~ 487 (493)
T PRK13580 484 LYPE 487 (493)
T ss_pred CCCc
Confidence 8 54
No 7
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=5.2e-62 Score=519.20 Aligned_cols=442 Identities=64% Similarity=1.071 Sum_probs=384.4
Q ss_pred hhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 009673 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (529)
Q Consensus 79 ~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la 158 (529)
++..|++.||++++++.+|.++|+++|+|+||||++||.|++++.+.++++|++|+|+++|+.|+++.+++|+.++++++
T Consensus 11 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a 90 (452)
T PTZ00094 11 LNQSLKEADPELYELIEKEKERQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRAL 90 (452)
T ss_pred hhhhHhhhCHHHHHHHHHHHHHHHcCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHH
Confidence 45668889999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred HHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCC
Q 009673 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238 (529)
Q Consensus 159 ~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~i 238 (529)
++||+++++|.++++++||++||.+++.++++|||+|++.+.+|++|++++.......+...+..+++.++++++ ++.+
T Consensus 91 ~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~-~g~i 169 (452)
T PTZ00094 91 EAFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE-KGLI 169 (452)
T ss_pred HHhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC-CCCc
Confidence 999999888878899999999999999999999999999999999999887533222334455567777887774 4899
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccC
Q 009673 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG 318 (529)
Q Consensus 239 D~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~G 318 (529)
|+++|+++++..+|++|+++.++++...|+++|.++|+++|+++++|++|+.|+++.+..+.++.++|++++|+||||.|
T Consensus 170 d~~~L~~~l~~~~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~G 249 (452)
T PTZ00094 170 DYDKLEELAKAFRPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRG 249 (452)
T ss_pred CHHHHHHHHHHhCCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCC
Confidence 99999999987689998887778888999999999999999999999999999998877777777899999999999999
Q ss_pred CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe
Q 009673 319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV 398 (529)
Q Consensus 319 prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~ 398 (529)
|+||+++++++.. ..+...++...+|.++|+++.+.+++++++++++...+++++.+++.+++++|.+.|.+.|+++.
T Consensus 250 P~Gg~l~~~~~~~--~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~ 327 (452)
T PTZ00094 250 PRSGLIFYRKKVK--PDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLV 327 (452)
T ss_pred CCceEEEEecccc--hHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEe
Confidence 9999999976311 12445566677888889999999999999999887677889999999999999999988899988
Q ss_pred cCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 399 SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 399 ~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.+++++|..++++...++++..+...|+++||.++...+|++..+..+++||+|++.+|++|++++||++++++|.+++.
T Consensus 328 ~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~ 407 (452)
T PTZ00094 328 TGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVK 407 (452)
T ss_pred cCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 75555677788887778888999999999999999888887765566789999999999999999999999999999999
Q ss_pred HHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 009673 479 ITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529 (529)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 529 (529)
....++++. +++..+|.+...++ ..+.++|++|.+||++||+|+.
T Consensus 408 ~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~~ 452 (452)
T PTZ00094 408 LAQEIQKQV-GKKLVDFKKALEKN-----PELQKLRQEVVEFASQFPFPGI 452 (452)
T ss_pred HHhhhhhhc-ccchhhhhhhcccH-----HHHHHHHHHHHHHHHhCCCCCC
Confidence 887776666 66656665544433 3789999999999999999984
No 8
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=6.4e-54 Score=451.91 Aligned_cols=412 Identities=57% Similarity=0.871 Sum_probs=354.0
Q ss_pred chhhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 009673 77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (529)
Q Consensus 77 ~~~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~ 156 (529)
.|+.+.|++.||+++++|++|..+|++.|+|++|||+++|.|++++.+.+.++|+.|++|+|+++|++.++++|++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~ 82 (416)
T PRK13034 3 FFFSDSLEEYDDEVFAAINKELERQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIER 82 (416)
T ss_pred chhhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999998899999999999999999999999989999
Q ss_pred HHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC
Q 009673 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (529)
Q Consensus 157 la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~ 236 (529)
+++++|.+. +.+.+.||+.||.+++.++++|||+|++.+..|++++.+|. .....+..++.+.+++++.++
T Consensus 83 la~l~g~~~----alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~ 153 (416)
T PRK13034 83 AKQLFGCDY----ANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGA-----KVSLSGKWYNAVQYGVDRLTG 153 (416)
T ss_pred HHHHhCCCc----eEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCC-----cceeccceeeeEEcccccccC
Confidence 999999986 45667899999999999999999999999999988766553 222334444546777776678
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccc
Q 009673 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 316 (529)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l 316 (529)
.+|++++++.+...++|+|+++.+.++...|+++|.++|+++|+++++|+||+.|.++.+....++.++|++++|+||++
T Consensus 154 ~~d~~~le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l 233 (416)
T PRK13034 154 LIDYDEVEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTL 233 (416)
T ss_pred CcCHHHHHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccC
Confidence 89999999998666899999877888888899999999999999999999999999887766666667999999999999
Q ss_pred cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcE
Q 009673 317 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK 396 (529)
Q Consensus 317 ~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~ 396 (529)
+||.||+++++++ ++.++++...+++++++++.+.+++++.++.+....++.++++++.+|+++|++.|.+.|++
T Consensus 234 ~g~~GG~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~ 308 (416)
T PRK13034 234 RGPRGGMILTNDE-----EIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYD 308 (416)
T ss_pred CCCCCeEEEECcH-----HHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 9999999998774 56666777777777777888888888777777654556788999999999999999999999
Q ss_pred EecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 397 LVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 397 v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
+..+++++|..++++...+.+...+.+.|+++||.++...+|++. .|..+++||+|++++|++|++++|++++++.|.+
T Consensus 309 ~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~ 388 (416)
T PRK13034 309 LVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILD 388 (416)
T ss_pred eccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHH
Confidence 875446789888888776777778889999999999987788864 5667889999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCC
Q 009673 476 GVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPI 526 (529)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~ 526 (529)
++... + +. +.+++||++|.+|+++||+
T Consensus 389 ~~~~~-------------------~-~~----~~~~~~~~~~~~~~~~~~~ 415 (416)
T PRK13034 389 VLDDL-------------------G-NA----ALEQRVRKEVKALCSRFPI 415 (416)
T ss_pred HHhcC-------------------C-CH----HHHHHHHHHHHHHHHhCCC
Confidence 87621 0 11 2578999999999999996
No 9
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=7.5e-49 Score=414.98 Aligned_cols=412 Identities=54% Similarity=0.847 Sum_probs=340.6
Q ss_pred hhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 009673 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (529)
Q Consensus 79 ~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la 158 (529)
+..+|++.||+++++|+++..++++.|+|+++||++|+.|++++...+.++|+.|+++++++.|.+..+++|+.++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la 81 (416)
T PRK00011 2 FMDNLAEYDPEIADAIEQELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAK 81 (416)
T ss_pred cchhhhhcCHHHHHHHHHHHHHHhcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHH
Confidence 34568999999999999988889999999999999999999999988888898899999999999999999988899999
Q ss_pred HHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCC
Q 009673 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238 (529)
Q Consensus 159 ~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~i 238 (529)
+++|++.. +|.++||+.|+..++.++++|||+|++++++|+++++++. .+.+.+.+.+++.++++++++.+
T Consensus 82 ~~~g~~~~----~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~ 152 (416)
T PRK00011 82 ELFGAEYA----NVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGS-----PVNFSGKLYNVVSYGVDEETGLI 152 (416)
T ss_pred HHhCCCce----eeecCCchHHHHHHHHHhcCCCCEEEEeccccCCcccccc-----ccccccceeeEeecCcCcccCCc
Confidence 99999863 4666899999999999999999999999999988766543 12223333577777777556899
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccC
Q 009673 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG 318 (529)
Q Consensus 239 D~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~G 318 (529)
|++++++.+++.+|++|+++.+++|...|+++|.++|+++|+++++|++|+.|++..+..+.++.++|++++|+||+++|
T Consensus 153 d~~~l~~~i~~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g 232 (416)
T PRK00011 153 DYDEVEKLALEHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRG 232 (416)
T ss_pred CHHHHHHHHHhcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCC
Confidence 99999999976689999998788887789999999999999999999999988876554444555789999999999999
Q ss_pred CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe
Q 009673 319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV 398 (529)
Q Consensus 319 prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~ 398 (529)
|+||+++++++ ++.++++....++..+++....++++..++......+++++.+++.++++++.+.|.+.|+++.
T Consensus 233 ~~gg~i~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 307 (416)
T PRK00011 233 PRGGLILTNDE-----ELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGFRVV 307 (416)
T ss_pred CCceEEEeCCH-----HHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeee
Confidence 99999999753 6777777666666667777778887777766655445688899999999999999999999876
Q ss_pred cCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 399 SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 399 ~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
..++.++++++++.+.+++...+.+.|++.||.++....|.+. .+..+.++|+++..++++|++++|++++++.|++++
T Consensus 308 ~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~ 387 (416)
T PRK00011 308 SGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVL 387 (416)
T ss_pred ecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHH
Confidence 5334568888887655556778888999999999866555542 445567899999888889999999999999999887
Q ss_pred HHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCC
Q 009673 478 EITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 528 (529)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~ 528 (529)
... .++. .++++++||.+|+++||.+.
T Consensus 388 ~~~-------------------~~~~-----~~~~~~~~~~~~~~~~~~~~ 414 (416)
T PRK00011 388 DNP-------------------DDEA-----VIEEVKEEVKELCKRFPLYK 414 (416)
T ss_pred hcc-------------------Ccch-----hHHHHHHHHHHHHHhCCCCC
Confidence 632 0122 57999999999999999654
No 10
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=100.00 E-value=5e-46 Score=391.63 Aligned_cols=383 Identities=62% Similarity=0.979 Sum_probs=318.3
Q ss_pred cCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC
Q 009673 85 EADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD 164 (529)
Q Consensus 85 ~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~ 164 (529)
++|++++.+|.+|...+++.|+|++++|++++.|++++..++..+|..|.++.++|+|.+..+++|+.+++++++++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~ 81 (402)
T cd00378 2 DVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE 81 (402)
T ss_pred CcCHHHHHHHHHHHHHHHhCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC
Confidence 68999999999998888999999999999999999999999888999999999999999999999988889999999998
Q ss_pred CCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHH
Q 009673 165 ENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLE 244 (529)
Q Consensus 165 ~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le 244 (529)
. .+|.+++|++|+..++.++++|||+|++.+|+|+++++++... .+...|..+..++++.+++++.+|+++++
T Consensus 82 ~----~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~id~~~l~ 154 (402)
T cd00378 82 Y----ANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFT---KVSASGKLFESVPYGVDPETGLIDYDALE 154 (402)
T ss_pred c----eeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccc---cccccceeEEEecCCcCcccCCcCHHHHH
Confidence 6 3566788999999999999999999999999999887765321 13345553444554444336899999999
Q ss_pred HHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeEE
Q 009673 245 KTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMI 324 (529)
Q Consensus 245 ~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~i 324 (529)
+.+...++++|+++.+++|...|+++|.++|+++|+++++|++|+.|+++.+..+.++.++|++++|+||+|+||+||++
T Consensus 155 ~~i~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~gg~i 234 (402)
T cd00378 155 KMALEFKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGLI 234 (402)
T ss_pred HHHHhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCceEE
Confidence 99975589999998888988889999999999999999999999998876654444445789999999999999999999
Q ss_pred EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCC
Q 009673 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 404 (529)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~ 404 (529)
+++++ ++.+++.....++..++++...+++++.++.+....+++++++++.++++++.+.|.+.|+.+......+
T Consensus 235 ~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 309 (402)
T cd00378 235 LTRKG-----ELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGGTDN 309 (402)
T ss_pred EeccH-----HHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEeecCCCC
Confidence 99874 5777776655666677777778888777777655435678889999999999999999999886432356
Q ss_pred ceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCC-CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 405 HLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKS-ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 405 ~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~-~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
+++|+++.+.+.+..++.+.|+++||.++....|+... +..+.++|||+..++++|++++|++++++.|.++++.
T Consensus 310 ~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 310 HLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred eEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 88888887555667778888999999998766677642 3456789999999998999999999999999988764
No 11
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-31 Score=278.10 Aligned_cols=339 Identities=19% Similarity=0.191 Sum_probs=249.8
Q ss_pred cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.|+|..+++ .+|+.+++++...+.+... .| + ..+-+.++++.+.+++.+.+|++.+.- .+|.+|+|+ +
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~Y-----~-~~~G~~~LReaia~~~~~~~~~~~~~~-~eiivt~Ga~~ 100 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-HY-----T-PSAGIPELREAIAEKYKRRYGLDVDPE-EEIIVTAGAKE 100 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-CC-----C-CCCCCHHHHHHHHHHHHHHhCCCCCCC-CeEEEeCCHHH
Confidence 5789988876 6789999999987765311 12 1 223355788888899999998654321 247889998 9
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC--CCCCCCHHHHHHHhhhcCCcEEEE
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE--STGLVDYDMLEKTAILFRPKLIIA 257 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~--~~~~iD~d~le~~i~~~~pklIi~ 257 (529)
|++.+++++++|||+|++++|.|..+ ...+.+.|. ++++++++. .+|.+|+|+|++.+++ ++|+|++
T Consensus 101 al~~~~~a~~~pGDeVlip~P~Y~~y--------~~~~~~~gg--~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~l 169 (393)
T COG0436 101 ALFLAFLALLNPGDEVLIPDPGYPSY--------EAAVKLAGG--KPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIIL 169 (393)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCcCH--------HHHHHhcCC--EEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEEE
Confidence 99999999999999999999866543 335566776 677777643 3699999999999999 9999999
Q ss_pred cCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccc-cCCCCC--c---ccEEEecccccc--cCCCCeEE
Q 009673 258 GASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK--Y---CDVVTTTTHKSL--RGPRGGMI 324 (529)
Q Consensus 258 ~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~~~--~---aDiv~~S~hK~l--~GprgG~i 324 (529)
++||||| . ..+++|+++|++||++||+|++ |.++++.+. +++.+. . .-|+++|+||++ +|||.||+
T Consensus 170 n~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEi-Y~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~ 248 (393)
T COG0436 170 NSPNNPTGAVYSKEELKAIVELAREHDIIIISDEI-YEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWV 248 (393)
T ss_pred eCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehh-hhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEe
Confidence 9999998 2 3588999999999999999999 788888774 444433 2 237889999985 89999999
Q ss_pred EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCC
Q 009673 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS-PEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS 402 (529)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~-~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt 402 (529)
+++++ ++.+.+.+.......+.+...+.++.+ ||+.-.. ...+..++.+.++++.+.+.|.+. |+.+..+..
T Consensus 249 v~~~~-----~l~~~~~~~~~~~~~~~~~~~Q~aa~~-aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~ 322 (393)
T COG0436 249 VGPPE-----ELIAALRKLKSYLTSCAPTPAQYAAIA-ALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPE 322 (393)
T ss_pred ecChH-----HHHHHHHHHHHhcccCCCHHHHHHHHH-HhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCC
Confidence 99942 676666533222334555666666554 6664321 234666678999999999999985 588877323
Q ss_pred CCceEEEccCCCCCcH-HHHHHhHhcCCeEEcCCCCCCCC-CC-CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 403 DNHLVLVDLRPMGIDG-ARVEKILDMASITLNKNSVPGDK-SA-LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 403 ~~~~~~v~~~~~~i~~-~~~~~~L~~~GI~v~~~~~Pg~~-~~-~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
..+++|+++... .++ +.+.++|++.||.| +||.. +. .+.++|||++. .+++++++..++|.+.+.
T Consensus 323 Ga~Y~~~~i~~~-~d~~~f~~~Ll~~~gV~v----~PG~~Fg~~~g~~~vRis~~------~~~~~l~~a~~rl~~~~~ 390 (393)
T COG0436 323 GAFYLFPKIPEL-LDSEEFAKKLLEEAGVAV----VPGSGFGEPPGEGYVRLSLA------TSEETLEEALRRLARFLA 390 (393)
T ss_pred eeEEEEeecCCC-CCHHHHHHHHHHhCCEEE----ecccccCCCCCCCeEEEEEe------cCHHHHHHHHHHHHHHHH
Confidence 467788888653 455 45678889999999 67765 32 35689999863 335788888888777664
No 12
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2e-30 Score=270.22 Aligned_cols=347 Identities=22% Similarity=0.243 Sum_probs=258.6
Q ss_pred eeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC-CCCceeeecCChH-HHH
Q 009673 105 LELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGS-PAN 181 (529)
Q Consensus 105 i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~-~~~~~~V~~~sGs-~A~ 181 (529)
+.|. +.....|..|++++..+..+-++....+. +.-.....+..+.+|+.+++++|+++ + +|..|.|+ +++
T Consensus 24 vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~--~~~~~~~t~~~e~aRe~va~~~~a~~~~----eIvft~~tT~al 97 (405)
T COG0520 24 VYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGA--HTLAEEATDLYEAAREAVARFLNADSSD----EIVFTRGTTEAL 97 (405)
T ss_pred EEecCcccccCCHHHHHHHHHHHHhhcCCcCccc--chHHHHHHHHHHHHHHHHHHHhCCCCCC----eEEEeCChhHHH
Confidence 4553 23345799999999987755444322221 22233444555578999999999995 5 45567776 899
Q ss_pred HHHHHhh---cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 182 FEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 182 ~~~l~al---l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
..+..++ +++||+|++.+.+|.+++..+... ....|. ++..++++ +++.+|.|++++.+++ +||+|.++
T Consensus 98 n~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~----~~~~Ga--~v~~i~~~-~~g~~~~~~~~~~i~~-~Tklvais 169 (405)
T COG0520 98 NLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQEL----AKRTGA--KVRVIPLD-DDGLLDLDALEKLITP-KTKLVALS 169 (405)
T ss_pred HHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHH----HHhcCc--EEEEEecC-CCCCcCHHHHHHhcCC-CceEEEEE
Confidence 9888888 699999999999998887655421 122354 66666677 6799999999999988 99999998
Q ss_pred CC-CCC-CCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhH
Q 009673 259 AS-AYP-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVE 335 (529)
Q Consensus 259 ~s-~~p-~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~ 335 (529)
.- |.. ...|+++|.++|+++|+++++|++|+.|....++... ++|++++|.||||.||.| |+++++++
T Consensus 170 ~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l---~~Df~afsgHKwl~gP~GiGvLy~r~~------ 240 (405)
T COG0520 170 HVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQEL---GCDFLAFSGHKWLLGPTGIGVLYVRKE------ 240 (405)
T ss_pred CccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhc---CCCEEEEcccccccCCCceEEEEEchH------
Confidence 43 333 3889999999999999999999999999875554322 699999999999999998 99999984
Q ss_pred HHhhhcc---------------------cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-c
Q 009673 336 LESAINN---------------------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-L 393 (529)
Q Consensus 336 l~~~i~~---------------------~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~ 393 (529)
+.+.+.. ....+..|+|+.....++..|++.++..++.+..++..+.++++.+.|.+ .
T Consensus 241 ~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~ 320 (405)
T COG0520 241 LLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELP 320 (405)
T ss_pred HHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4333311 11122368999999999999999888777888889999999999999988 5
Q ss_pred CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCC---CCCCCCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673 394 GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV---PGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 470 (529)
Q Consensus 394 G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~---Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la 470 (529)
++.++.+.......++.+.-.+++..++...|.+.||.++.+.. |...--..++.+|+|+..++| ++|+++++
T Consensus 321 ~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt----~edid~l~ 396 (405)
T COG0520 321 GVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNT----EEDVDRLL 396 (405)
T ss_pred CeEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCC----HHHHHHHH
Confidence 78888754322334444444567889999999999999976532 221111124459999998886 89999999
Q ss_pred HHHHHHHH
Q 009673 471 DFIHEGVE 478 (529)
Q Consensus 471 ~~i~~~~~ 478 (529)
+.|+++..
T Consensus 397 ~aL~~~~~ 404 (405)
T COG0520 397 EALKKALA 404 (405)
T ss_pred HHHHHHhh
Confidence 99988653
No 13
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.97 E-value=5.5e-28 Score=250.32 Aligned_cols=331 Identities=17% Similarity=0.123 Sum_probs=235.1
Q ss_pred eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 009673 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (529)
Q Consensus 105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~ 184 (529)
+++++++..+|++|++++...+.. + ++. . ..++.+.+++++++++|++.++ ..+.+.+|++|+..+
T Consensus 1 ~~~~~~~~~~~~~v~~a~~~~~~~-----~---~~~---~-~~~~~~~~~~~la~~~g~~~~~--~~~~~~~~t~al~~~ 66 (356)
T cd06451 1 LLLIPGPSNVPPRVLKAMNRPMLG-----H---RSP---E-FLALMDEILEGLRYVFQTENGL--TFLLSGSGTGAMEAA 66 (356)
T ss_pred CcccCCCcCCCHHHHHHhCCCccC-----C---CCH---H-HHHHHHHHHHHHHHHhcCCCCC--EEEEecCcHHHHHHH
Confidence 467899999999999999754321 1 111 1 2233334568999999996432 234456678999999
Q ss_pred HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC
Q 009673 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 264 (529)
Q Consensus 185 l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~ 264 (529)
+.++++|||+|++.++.|.++ .+. ..+...|. +++.+++++ ++.+|++++++.+++++|++|++++++|++
T Consensus 67 ~~~~~~~g~~vl~~~~~~~~~---~~~---~~~~~~g~--~~~~v~~~~-~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~ 137 (356)
T cd06451 67 LSNLLEPGDKVLVGVNGVFGD---RWA---DMAERYGA--DVDVVEKPW-GEAVSPEEIAEALEQHDIKAVTLTHNETST 137 (356)
T ss_pred HHHhCCCCCEEEEecCCchhH---HHH---HHHHHhCC--CeEEeecCC-CCCCCHHHHHHHHhccCCCEEEEeccCCCc
Confidence 999999999999988755432 110 12233454 555666653 578999999999976689999888776654
Q ss_pred --CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhc
Q 009673 265 --DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 341 (529)
Q Consensus 265 --~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~ 341 (529)
..|+++|.++|+++|+++++|++|+.|....+... .++|++++|+||||.+|.| |+++.++ ++.+.+.
T Consensus 138 G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~---~~~d~~~~s~~K~l~~p~g~G~l~~~~------~~~~~~~ 208 (356)
T cd06451 138 GVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDE---WGVDVAYTGSQKALGAPPGLGPIAFSE------RALERIK 208 (356)
T ss_pred ccccCHHHHHHHHHhcCCEEEEeeehhccCccccccc---cCccEEEecCchhccCCCCcceeEECH------HHHHHHH
Confidence 78999999999999999999999887754322111 1579999999999998877 9999987 5554443
Q ss_pred c--ccc----------------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCC-C
Q 009673 342 N--AVF----------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG-S 402 (529)
Q Consensus 342 ~--~~~----------------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~g-t 402 (529)
. ... ....++++...++++..+++.+...+++...++..++++++.+.|.+.|+++..+. .
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 288 (356)
T cd06451 209 KKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPEL 288 (356)
T ss_pred hcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCccc
Confidence 2 000 02345677877888888888766666778888999999999999998898887531 1
Q ss_pred -CCceEEEccCCCCCcHHHHHHhHhcC-CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 403 -DNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 403 -~~~~~~v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
.+.+.++.+ +.+.+...+.+.|.+. ||.+..+. . +..+++||++...++ +++|++++++.|++++
T Consensus 289 ~~~~~~~~~~-~~~~~~~~~~~~L~~~~gI~~~~g~----~-~~~~~~iRis~~~~~----~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 289 RSPTVTAVLV-PEGVDGDEVVRRLMKRYNIEIAGGL----G-PTAGKVFRIGHMGEA----TREDVLGVLSALEEAL 355 (356)
T ss_pred CCCceEEEEC-CCCCCHHHHHHHHHHhCCEEEeccc----c-cccCCEEEEecCCCC----CHHHHHHHHHHHHHHh
Confidence 122234444 3355677888888777 99996432 1 223568999987654 4899999999998865
No 14
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.96 E-value=1.3e-27 Score=251.79 Aligned_cols=343 Identities=20% Similarity=0.244 Sum_probs=244.1
Q ss_pred ceeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCceeeecCChH-H
Q 009673 104 SLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGS-P 179 (529)
Q Consensus 104 ~i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~-r~~~g~~~~d~lE~~a~~~la~~~g~-~~~~~~~~V~~~sGs-~ 179 (529)
.+.|. ++..++|+.|.+++...+.+.+ +.+.. .+..+..+.+.++ .+++.+++++|+ +++ +|..++|+ +
T Consensus 20 ~~yld~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~----~i~~~~~~t~ 92 (401)
T PRK10874 20 GVYLDSAATALKPQAVIEATQQFYSLSA--GNVHRSQFAAAQRLTARYE-AAREQVAQLLNAPDAK----NIVWTRGTTE 92 (401)
T ss_pred eEEEeCCcccCCCHHHHHHHHHHHHhcc--CCCCCcccHHHHHHHHHHH-HHHHHHHHHcCCCCCC----EEEEECCHHH
Confidence 46665 4556889999999988886543 33321 1222344455555 567899999999 554 34445555 8
Q ss_pred HHHHHHHhh----cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673 180 ANFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (529)
Q Consensus 180 A~~~~l~al----l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI 255 (529)
++..++.++ ++|||+|++++++|.+.+.... ......|. +++.++++ +++.+|++++++.+++ +|++|
T Consensus 93 ~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~i~~-~t~lv 164 (401)
T PRK10874 93 SINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWL----MVAQQTGA--KVVKLPLG-ADRLPDVDLLPELITP-RTRIL 164 (401)
T ss_pred HHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHH----HHHHHhCC--EEEEEecC-CCCcCCHHHHHHhcCc-CcEEE
Confidence 888888887 4899999999998866432111 11233454 55566665 4578999999999987 89999
Q ss_pred EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcc
Q 009673 256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL 332 (529)
Q Consensus 256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~ 332 (529)
++++++|++ ..|+++|.++|+++|+++++|++|+.|....+.... ++|++++|+||+ .||.| |++++++
T Consensus 165 ~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~---~~d~~~~s~~K~-~gp~G~G~l~~~~---- 236 (401)
T PRK10874 165 ALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQAL---DIDFYAFSGHKL-YGPTGIGVLYGKS---- 236 (401)
T ss_pred EEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhc---CCCEEEEecccc-cCCCccEEEEEch----
Confidence 998887775 789999999999999999999999877654332111 589999999995 57888 9999987
Q ss_pred hhHHHhhhcccc--------------------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673 333 GVELESAINNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (529)
Q Consensus 333 ~~~l~~~i~~~~--------------------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~ 392 (529)
++.+.+.... .....|+|+...++++..|++.+...++....+++.+.++++.+.|++
T Consensus 237 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~ 314 (401)
T PRK10874 237 --ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAK 314 (401)
T ss_pred --HHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 4544433111 112357888889999998988776666677778888888999999988
Q ss_pred c-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC---CCCCCCeEEEccCCCccCCCCHHHHHH
Q 009673 393 L-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVA 468 (529)
Q Consensus 393 ~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~---~~~~~~~iRig~~~~tt~g~~~~d~~~ 468 (529)
. |+.++.+. .+.++.+.+. +++.+++.+.|.++||.++.+..+... .....++||||+..++| ++|+++
T Consensus 315 ~~g~~~~~~~-~~~i~~~~~~--~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt----~edid~ 387 (401)
T PRK10874 315 LPGFRSFRCQ-DSSLLAFDFA--GVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNT----QSDVDA 387 (401)
T ss_pred CCCEEEeCCC-CCcEEEEEEC--CcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCC----HHHHHH
Confidence 4 88876532 2445555553 456778888999999999654322100 00124789999987765 899999
Q ss_pred HHHHHHHHHH
Q 009673 469 IADFIHEGVE 478 (529)
Q Consensus 469 la~~i~~~~~ 478 (529)
+++.|++++.
T Consensus 388 ll~al~~~~~ 397 (401)
T PRK10874 388 LVNAVDRALE 397 (401)
T ss_pred HHHHHHHHHH
Confidence 9999998765
No 15
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.96 E-value=7.7e-28 Score=242.52 Aligned_cols=340 Identities=21% Similarity=0.240 Sum_probs=251.1
Q ss_pred CCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh-
Q 009673 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI- 188 (529)
Q Consensus 111 en~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~al- 188 (529)
..++.++|+++|..+++..| |+|.+-+..|.+..+.+| .+++.+++++|+++.+ |..|||. ++|..++.+.
T Consensus 10 TTp~~~~v~~~m~~~~~~~f--gNPsS~H~~G~~A~~~ve-~AR~~iA~llga~~~e----IiFTSG~TEsnNlaI~g~~ 82 (386)
T COG1104 10 TTPVDPEVLEAMLPYLTEVF--GNPSSLHSFGREARKAVE-EAREQIAKLLGADPEE----IIFTSGATESNNLAIKGAA 82 (386)
T ss_pred cCCCCHHHHHHHHHHHHhhc--CCccchhHhHHHHHHHHH-HHHHHHHHHhCCCCCe----EEEecCCcHHHHHHHHhhH
Confidence 45789999999999998775 788776666777667777 6899999999999863 4456665 9999888763
Q ss_pred -c----CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC-
Q 009673 189 -L----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY- 262 (529)
Q Consensus 189 -l----~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~- 262 (529)
. +.|.+|+++..+|.+.+....+ ....| +++-+++++ .+|.+|+++|++++++ ++-+|.+.+.||
T Consensus 83 ~a~~~~~~~~HIIts~iEH~aVl~~~~~-----Le~~g--~~Vtyl~V~-~~G~v~~e~L~~al~~-~T~LVSim~aNnE 153 (386)
T COG1104 83 LAYRNAQKGKHIITSAIEHPAVLNTCRY-----LERQG--FEVTYLPVD-SNGLVDLEQLEEALRP-DTILVSIMHANNE 153 (386)
T ss_pred HhhhcccCCCeEEEcccccHHHHHHHHH-----HHhcC--CeEEEeCCC-CCCeEcHHHHHHhcCC-CceEEEEEecccC
Confidence 2 2578999999999877643321 11123 577788887 4799999999999987 788877765554
Q ss_pred -CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673 263 -PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 340 (529)
Q Consensus 263 -p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i 340 (529)
++++|+++|.++|+++|+++++|++|+.|-++.+.... ++|++++|.||. .||+| |+++.+++. .+...+
T Consensus 154 ~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~---~vD~ls~SaHK~-~GpkGiGaLyv~~~~----~~~p~i 225 (386)
T COG1104 154 TGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEEL---GVDLLSFSAHKF-GGPKGIGALYVRPGV----RLEPLI 225 (386)
T ss_pred eeecccHHHHHHHHHHcCCeEEEehhhhcCceecccccc---CcceEEeehhhc-cCCCceEEEEECCCC----ccCcee
Confidence 45999999999999999999999999999876543332 489999999994 69999 999997742 111111
Q ss_pred cc-cccC-CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecCC--CCCceEEEccCCC
Q 009673 341 NN-AVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGG--SDNHLVLVDLRPM 414 (529)
Q Consensus 341 ~~-~~~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~g--t~~~~~~v~~~~~ 414 (529)
.- .... .-.|+.+.+.+++++.|++... .+++....++...+++|.+.|.+ .++.+.... .-.|.+.+.+ .
T Consensus 226 ~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~-~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f--~ 302 (386)
T COG1104 226 HGGGQERGLRSGTENVPGIVGFGKAAEIAV-EELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSF--P 302 (386)
T ss_pred ccCcCCCCCCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEe--C
Confidence 10 0111 1268889999999999998775 56778888899999999999987 344444321 1223333333 4
Q ss_pred CCcHHHHHHhHhcCCeEEcCCCC-------CCCC-------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 415 GIDGARVEKILDMASITLNKNSV-------PGDK-------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 415 ~i~~~~~~~~L~~~GI~v~~~~~-------Pg~~-------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
++.++.+...|+.+||.++.++- |.+. .....+.||||+...|| ++|++++++.+.++++..
T Consensus 303 gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt----~eei~~~~~~l~~~i~~l 378 (386)
T COG1104 303 GVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTT----EEEIDAAAEALKEIIKRL 378 (386)
T ss_pred CCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 67889999999999999987642 1110 01223679999987765 899999999999999865
Q ss_pred H
Q 009673 481 L 481 (529)
Q Consensus 481 ~ 481 (529)
.
T Consensus 379 r 379 (386)
T COG1104 379 R 379 (386)
T ss_pred h
Confidence 3
No 16
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.96 E-value=1.2e-27 Score=254.27 Aligned_cols=341 Identities=17% Similarity=0.211 Sum_probs=238.6
Q ss_pred cceeEecCCC---CCcH----HHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC
Q 009673 103 KSLELIASEN---FTSR----AVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL 175 (529)
Q Consensus 103 ~~i~L~asen---~~~~----~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~ 175 (529)
+.++|..++. +.++ ++.+++...+.... ..|++...+.+++ +.+++++|.+. + +.++
T Consensus 37 ~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~-------~~Y~~~~g~~~Lr----eaia~~~~~~~----v-v~t~ 100 (460)
T PRK13238 37 NPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGD-------EAYAGSRSYYRLE----DAVKDIFGYPY----T-IPTH 100 (460)
T ss_pred CEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCC-------cccCCCCCHHHHH----HHHHHHhCCCc----E-EECC
Confidence 5677777664 3332 46777766664221 2355555677777 56778888764 2 4556
Q ss_pred ChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC---------CCCCCCHHHHHHH
Q 009673 176 SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE---------STGLVDYDMLEKT 246 (529)
Q Consensus 176 sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~---------~~~~iD~d~le~~ 246 (529)
+|++|+..++.++++||| |++++|.+..+ ...+...|. +++.+++++ .++.+|+++|++.
T Consensus 101 ggt~A~~~~~~all~pGD-Vii~~p~~~~~--------~~~i~~~G~--~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~ 169 (460)
T PRK13238 101 QGRAAEQILFPVLIKKGD-VVPSNYHFDTT--------RAHIELNGA--TAVDLVIDEALDTGSRHPFKGNFDLEKLEAL 169 (460)
T ss_pred CHHHHHHHHHHHhCCCCC-EEccCCcccch--------HHHHHHcCC--EEEEEeccccccccccccccCCcCHHHHHHH
Confidence 777999999999999999 88776633322 123455665 666666642 1245999999999
Q ss_pred hhhc---CCcEEEEcCCCCCC---CC---CHHHHHHHHHHhCCEEEEecccccc-cccc-----cccCCC--------CC
Q 009673 247 AILF---RPKLIIAGASAYPR---DF---DYPRMRQIADAVGALLMMDMAHISG-LVAA-----SVVADP--------FK 303 (529)
Q Consensus 247 i~~~---~pklIi~~~s~~p~---~~---d~~~i~~ia~~~g~~livD~ah~~G-li~~-----~~~~~~--------~~ 303 (529)
+++. ++++|+++.|+||+ .. ++++|+++|++||++||+|++|+.+ +++. +..... ..
T Consensus 170 i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s 249 (460)
T PRK13238 170 IEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFS 249 (460)
T ss_pred HhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcc
Confidence 9852 68999999888874 23 4679999999999999999998653 2221 111111 23
Q ss_pred cccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccccC--C--CCCCChHHHHHHHHHHHHHhcCchHHHHHHHH
Q 009673 304 YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFP--G--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV 379 (529)
Q Consensus 304 ~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p--~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~i 379 (529)
++|++++|++|.+.+|.||++++++. ++.++++...+. + .+|+++...++|++.+|++...+ .|.+..
T Consensus 250 ~~D~~~~Sg~K~g~~~~GG~i~~~d~-----~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~---~~~~~~ 321 (460)
T PRK13238 250 YADGLTMSAKKDAMVNIGGLLCFRDE-----DLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDE---DYLAYR 321 (460)
T ss_pred cCcEEEEecccCCCCcceeEEEcChH-----HHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhCh---HHHHHH
Confidence 68999999999999999999999864 788877665422 2 35676777788888888775543 445555
Q ss_pred HHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC-------CC-cHHHHHHhHhcCCeEEcCCC---CCCCCC-----C
Q 009673 380 VSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM-------GI-DGARVEKILDMASITLNKNS---VPGDKS-----A 443 (529)
Q Consensus 380 ~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~-------~i-~~~~~~~~L~~~GI~v~~~~---~Pg~~~-----~ 443 (529)
.+++++|.+.|.+.|++++.+ ...|++++|++.. +. +...+..++++.||.+.... .+.+.. .
T Consensus 322 ~~~~~~l~~~L~~~G~~~~~p-~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~ 400 (460)
T PRK13238 322 IGQVEYLGEGLEEAGVPIQTP-AGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLP 400 (460)
T ss_pred HHHHHHHHHHHHHCCCCeEcc-CCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccC
Confidence 667899999999999998865 3468899988642 12 23456788899999984432 222221 0
Q ss_pred CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHH
Q 009673 444 LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE 482 (529)
Q Consensus 444 ~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~ 482 (529)
-....+|++++ .|+++.+.++++++.|.++.++...
T Consensus 401 ~~~~~~Rla~~---rr~~~~~~~~~~~~~l~~~~~~~~~ 436 (460)
T PRK13238 401 APAELLRLAIP---RRVYTQSHMDYVAEALKAVKENRES 436 (460)
T ss_pred CccceEEEecc---cccCCHHHHHHHHHHHHHHHHhHhh
Confidence 12478999977 6889999999999999998866543
No 17
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.96 E-value=2.7e-27 Score=249.70 Aligned_cols=345 Identities=17% Similarity=0.134 Sum_probs=241.8
Q ss_pred ceeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCceeeecCChH-HH
Q 009673 104 SLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGS-PA 180 (529)
Q Consensus 104 ~i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~-~~~~~~~~V~~~sGs-~A 180 (529)
.+.|. ++..++|+.|++++...+...+.....+ .+..+....+.++ .+++.+++++|. +++ +|..++|+ ++
T Consensus 24 ~iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~r~~la~~~~~~~~~----~v~~t~g~t~~ 97 (406)
T PRK09295 24 LAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRG-IHTLSAQATEKME-NVRKQAALFINARSAE----ELVFVRGTTEG 97 (406)
T ss_pred eEEEeCcccccCCHHHHHHHHHHHHhcCCCCCCc-ccHHHHHHHHHHH-HHHHHHHHHcCcCCCC----eEEEeCCHHHH
Confidence 36665 4567889999999988876444211112 1222334455555 467899999998 444 34456665 88
Q ss_pred HHHHHHh----hcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673 181 NFEVYTA----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (529)
Q Consensus 181 ~~~~l~a----ll~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi 256 (529)
+..++.+ +++|||+|++.+++|.+.+.... ......|. +++.++++ +++.+|+++|++.+++ ++++|+
T Consensus 98 l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~i~~-~t~lv~ 169 (406)
T PRK09295 98 INLVANSWGNSNVRAGDNIIISEMEHHANIVPWQ----MLCARVGA--ELRVIPLN-PDGTLQLETLPALFDE-RTRLLA 169 (406)
T ss_pred HHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHH----HHHHHcCc--EEEEEecC-CCCCCCHHHHHHhcCC-CcEEEE
Confidence 8888776 46899999999988765432211 11123454 55566665 4578999999999987 899999
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcch
Q 009673 257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG 333 (529)
Q Consensus 257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~ 333 (529)
+++++|++ ..|+++|.++|+++|+++++|++|+.|....+... .++|++++|+|| +.||.| |+++++++
T Consensus 170 l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~---~~~D~~~~s~~K-~~gp~G~G~l~~~~~---- 241 (406)
T PRK09295 170 ITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQA---LDCDFYVFSGHK-LYGPTGIGILYVKEA---- 241 (406)
T ss_pred EecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchh---cCCCEEEeehhh-ccCCCCcEEEEEchH----
Confidence 99877776 78999999999999999999999988765332211 158999999999 558888 99999873
Q ss_pred hHHHhhhccc---------------------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673 334 VELESAINNA---------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (529)
Q Consensus 334 ~~l~~~i~~~---------------------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~ 392 (529)
+.+.+... ......|+++...++++..|++.+...+.+...++..+.++++.+.|.+
T Consensus 242 --~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 319 (406)
T PRK09295 242 --LLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLES 319 (406)
T ss_pred --hHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 33322110 0112367899999999999998877667777788888889999999987
Q ss_pred c-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC---CCCCCCeEEEccCCCccCCCCHHHHHH
Q 009673 393 L-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVA 468 (529)
Q Consensus 393 ~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~---~~~~~~~iRig~~~~tt~g~~~~d~~~ 468 (529)
. |++++.+....+++.+.+ .+.+++++.+.|++.||.++.+...... ....++.+|+|.+.++| ++|+++
T Consensus 320 ~~~~~~~~~~~~~~iv~~~~--~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt----~~did~ 393 (406)
T PRK09295 320 VPDLTLYGPQNRLGVIAFNL--GKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNT----HEEVDR 393 (406)
T ss_pred CCCEEEeCCCCCceEEEEEE--CCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCC----HHHHHH
Confidence 4 788876422233443333 3456778888999999999654211000 00124679999988876 899999
Q ss_pred HHHHHHHHHH
Q 009673 469 IADFIHEGVE 478 (529)
Q Consensus 469 la~~i~~~~~ 478 (529)
+++.|+++..
T Consensus 394 l~~~l~~i~~ 403 (406)
T PRK09295 394 LVAGLQRIHR 403 (406)
T ss_pred HHHHHHHHHH
Confidence 9999988643
No 18
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.96 E-value=4.9e-27 Score=247.04 Aligned_cols=343 Identities=20% Similarity=0.221 Sum_probs=241.1
Q ss_pred ceeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCC-CCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChH-H
Q 009673 104 SLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS-P 179 (529)
Q Consensus 104 ~i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~-~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs-~ 179 (529)
.+.|. ++..++|+.|++++...+...+ +.+. ..+..+.++.+.++ .+++.+++++|++ ++ +|.+++|+ +
T Consensus 17 ~iyld~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~----~i~~t~g~t~ 89 (398)
T TIGR03392 17 TVYLDSAATALKPQAVIDATQQFYRLSS--GTVHRSQHQQAQSLTARYE-LARQQVARFLNAPDAE----NIVWTRGTTE 89 (398)
T ss_pred eEEeeCccccCCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHH-HHHHHHHHHhCCCCCC----eEEEeCChHH
Confidence 46665 4556889999999988775433 2332 12223333334444 5678999999995 44 34445555 9
Q ss_pred HHHHHHHhh----cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673 180 ANFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (529)
Q Consensus 180 A~~~~l~al----l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI 255 (529)
++..++.++ ++|||+|++.+++|.+.+.... ......|. +++.++++ .++.+|++++++++++ ++++|
T Consensus 90 ~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~----~~~~~~g~--~v~~v~~~-~~~~~~~~~l~~~i~~-~t~lv 161 (398)
T TIGR03392 90 SINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWL----MVAQQTGA--KVVKLPIG-ADLLPDIRQLPELLTP-RTRIL 161 (398)
T ss_pred HHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHH----HHHHHcCc--EEEEEecC-CCCCcCHHHHHHHhcc-CceEE
Confidence 999888887 5899999999998865432111 11233454 66666665 3478999999999987 89999
Q ss_pred EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcc
Q 009673 256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL 332 (529)
Q Consensus 256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~ 332 (529)
++++++|++ ..|+++|.++|+++|+++++|++|+.|....+... -++|++++|+||. .||.| |++++++
T Consensus 162 ~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~---~~~d~~~~s~~K~-~gp~G~G~l~~~~---- 233 (398)
T TIGR03392 162 ALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQA---LDIDFYAFSGHKL-YGPTGIGVLYGKT---- 233 (398)
T ss_pred EEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhh---cCCCEEEEecccc-cCCCceEEEEEcH----
Confidence 998877775 78999999999999999999999977754322211 1589999999995 47877 9999887
Q ss_pred hhHHHhhhcccc--------------------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673 333 GVELESAINNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (529)
Q Consensus 333 ~~~l~~~i~~~~--------------------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~ 392 (529)
++.+.+.... .....|+++...++++..+++.+...++++..++..+.++++.+.|.+
T Consensus 234 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~ 311 (398)
T TIGR03392 234 --ELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQ 311 (398)
T ss_pred --HHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 4444442110 111257889989999999998776666777778888888999999987
Q ss_pred c-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC--CC-CCCCeEEEccCCCccCCCCHHHHHH
Q 009673 393 L-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK--SA-LVPGGIRIGSPAMTTRGFSEKEFVA 468 (529)
Q Consensus 393 ~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~--~~-~~~~~iRig~~~~tt~g~~~~d~~~ 468 (529)
. |+.+.... .++++.+.+. +++++++.+.|.++||.++.+...... .. ..+++||+|++.++| ++|+++
T Consensus 312 l~g~~~~~~~-~~~i~~~~~~--~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t----~~ei~~ 384 (398)
T TIGR03392 312 LPGFRSFRCP-GSSLLAFDFA--GVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNT----QQDVDA 384 (398)
T ss_pred CCCeEEeCCC-CCcEEEEEeC--CcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCC----HHHHHH
Confidence 4 88876432 2444444443 556788888899999999754311000 00 024689999987765 899999
Q ss_pred HHHHHHHHHH
Q 009673 469 IADFIHEGVE 478 (529)
Q Consensus 469 la~~i~~~~~ 478 (529)
+++.|+++++
T Consensus 385 l~~~l~~~~~ 394 (398)
T TIGR03392 385 LVDAVGAALE 394 (398)
T ss_pred HHHHHHHHHH
Confidence 9999998765
No 19
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.96 E-value=1e-26 Score=244.93 Aligned_cols=344 Identities=19% Similarity=0.193 Sum_probs=239.5
Q ss_pred ceeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChH-H
Q 009673 104 SLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS-P 179 (529)
Q Consensus 104 ~i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~r-~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs-~ 179 (529)
.+.|. ++..++|+.|.+++...+...+. .+... ++.+..+.+.++ .+++.+++++|++ ++ +|..++|+ +
T Consensus 19 ~~yld~~~~~~~p~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~r~~ia~~~~~~~~~----~v~~~~g~t~ 91 (403)
T TIGR01979 19 LVYLDSAATSQKPQQVIDAVAEYYRNSNA--NVHRGIHTLSVRATEAYE-AVREKVAKFINAASDE----EIVFTRGTTE 91 (403)
T ss_pred eEEEeCccccCCCHHHHHHHHHHHHhCCC--CCCCCccHHHHHHHHHHH-HHHHHHHHHhCcCCCC----eEEEeCCHHH
Confidence 36665 35568899999999877765542 22211 122223333444 5678899999998 43 34455655 8
Q ss_pred HHHHHHHhh----cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673 180 ANFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (529)
Q Consensus 180 A~~~~l~al----l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI 255 (529)
++..++.++ ++|||+|++.+++|.+++.... ......|. +++.++++ +++.+|++++++.+++ +|++|
T Consensus 92 ~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~----~~~~~~g~--~~~~v~~~-~~~~~~~~~l~~~i~~-~~~lv 163 (403)
T TIGR01979 92 SINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQ----LLAERTGA--TLKFIPLD-DDGTLDLDDLEKLLTE-KTKLV 163 (403)
T ss_pred HHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHH----HHHHhcCc--EEEEEecC-CCCCCCHHHHHHHhcc-CCeEE
Confidence 888777764 6899999999998876532211 12223454 55566666 5688999999999987 89999
Q ss_pred EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcc
Q 009673 256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL 332 (529)
Q Consensus 256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~ 332 (529)
++++++|++ ..|+++|.++|+++|+++++|++|+.|....+... .++|++++|+||++ ||.| |++++++
T Consensus 164 ~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~---~~~d~~~~s~~K~~-gp~G~g~l~~~~---- 235 (403)
T TIGR01979 164 AITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQA---LDCDFYVFSGHKMY-GPTGIGVLYGKE---- 235 (403)
T ss_pred EEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccc---cCCCEEEEeccccc-CCCCceEEEEch----
Confidence 998777665 78999999999999999999999988765332211 15899999999976 7887 9999987
Q ss_pred hhHHHhhhcccc--------------------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673 333 GVELESAINNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (529)
Q Consensus 333 ~~~l~~~i~~~~--------------------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~ 392 (529)
++.+.+.... .....|+++...++++..+++.+...+++...+++.+.++.+.+.|++
T Consensus 236 --~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 313 (403)
T TIGR01979 236 --ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGE 313 (403)
T ss_pred --HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 4444332110 111257888888888888888776556778888899999999999987
Q ss_pred c-CcEEecCCC---CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCC---CCCCCCCeEEEccCCCccCCCCHHH
Q 009673 393 L-GYKLVSGGS---DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD---KSALVPGGIRIGSPAMTTRGFSEKE 465 (529)
Q Consensus 393 ~-G~~v~~~gt---~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~---~~~~~~~~iRig~~~~tt~g~~~~d 465 (529)
. |++++.+.. ..+++.+.+. +++..++.+.|+++||.++.+..... .....++.+||+++.+++ ++|
T Consensus 314 ~~g~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t----~~d 387 (403)
T TIGR01979 314 IPGLRIYGPRDAEDRGGIISFNVE--GVHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNT----EED 387 (403)
T ss_pred CCCEEEeCCCCccccCceEEEEeC--CcCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCC----HHH
Confidence 4 888876421 1345555543 34667888899999999964321000 000124789999887764 799
Q ss_pred HHHHHHHHHHHHH
Q 009673 466 FVAIADFIHEGVE 478 (529)
Q Consensus 466 ~~~la~~i~~~~~ 478 (529)
+++++++|+++++
T Consensus 388 i~~l~~~l~~~~~ 400 (403)
T TIGR01979 388 IDALVEALKKVRK 400 (403)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987664
No 20
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=9.7e-27 Score=246.79 Aligned_cols=347 Identities=17% Similarity=0.136 Sum_probs=240.9
Q ss_pred ceeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC-CCCceeeecCChH-HH
Q 009673 104 SLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGS-PA 180 (529)
Q Consensus 104 ~i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~-~~~~~~V~~~sGs-~A 180 (529)
.+.|. ++..++|+.|++++...+...+.....+ .++.+.+..+.++ .+++.+++++|++. + +|.+++|+ ++
T Consensus 33 ~iyLd~a~~~~~p~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~r~~la~~~~~~~~~----~v~~t~g~t~a 106 (424)
T PLN02855 33 LVYLDNAATSQKPAAVLDALQDYYEEYNSNVHRG-IHALSAKATDAYE-LARKKVAAFINASTSR----EIVFTRNATEA 106 (424)
T ss_pred eEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCc-cchHHHHHHHHHH-HHHHHHHHHcCCCCCC----EEEEeCCHHHH
Confidence 46664 3456789999999988775443211111 1232333444444 56789999999963 3 34445555 88
Q ss_pred HHHHHHh----hcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673 181 NFEVYTA----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (529)
Q Consensus 181 ~~~~l~a----ll~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi 256 (529)
+..++.+ .++|||+|++++++|.+.+.... ......|. +++.+++++ ++.+|++++++.+++ ++++|+
T Consensus 107 l~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~a~~~g~--~v~~v~~~~-~~~~~~~~l~~~i~~-~t~lv~ 178 (424)
T PLN02855 107 INLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQ----LVAQKTGA--VLKFVGLTP-DEVLDVEQLKELLSE-KTKLVA 178 (424)
T ss_pred HHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHH----HHHHHcCC--EEEEEecCC-CCCcCHHHHHHHhcc-CceEEE
Confidence 8877765 36899999999998875532111 11123354 555666653 456999999999987 899999
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcch
Q 009673 257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG 333 (529)
Q Consensus 257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~ 333 (529)
+++++|++ ..|+++|.++|+++|+++++|++|+.|.+..+.... ++|++++|+|| +.||.| |++++++
T Consensus 179 i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~---~~d~~~~s~~K-~~gp~G~G~l~~~~----- 249 (424)
T PLN02855 179 THHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTL---GADFLVASSHK-MCGPTGIGFLWGKS----- 249 (424)
T ss_pred EeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhc---CCCEEEeeccc-ccCCCccEEEEEch-----
Confidence 98877765 789999999999999999999999877653322111 57999999999 568887 9999987
Q ss_pred hHHHhhhccc--------------------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc
Q 009673 334 VELESAINNA--------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (529)
Q Consensus 334 ~~l~~~i~~~--------------------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~ 393 (529)
++.+++... ......|+++...++++..+++.+...++++..+++.+.++.+.+.|.+.
T Consensus 250 -~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~ 328 (424)
T PLN02855 250 -DLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSV 328 (424)
T ss_pred -hhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC
Confidence 343333211 00123678999999999999987766677888888889999999999874
Q ss_pred -CcEEecCCC-----CCceEEEccCCCCCcHHHHHHhHhcC-CeEEcCCCCC---CCCCCCCCCeEEEccCCCccCCCCH
Q 009673 394 -GYKLVSGGS-----DNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVP---GDKSALVPGGIRIGSPAMTTRGFSE 463 (529)
Q Consensus 394 -G~~v~~~gt-----~~~~~~v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~P---g~~~~~~~~~iRig~~~~tt~g~~~ 463 (529)
|++++.+.. ...++.+.+ .+++.+++.+.|.+. ||.++.+..- ....-..++.||||++.++| +
T Consensus 329 ~g~~i~~~~~~~~~~r~~~v~~~~--~~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt----~ 402 (424)
T PLN02855 329 PGVRIYGPKPSEGVGRAALCAFNV--EGIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNT----K 402 (424)
T ss_pred CCEEEeCCCcccccCcccEEEEEE--CCcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCC----H
Confidence 888886421 123344443 345677888889776 9998753210 00000113679999988876 7
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009673 464 KEFVAIADFIHEGVEIT 480 (529)
Q Consensus 464 ~d~~~la~~i~~~~~~~ 480 (529)
+|++++++.|+++++..
T Consensus 403 ~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 403 EEVDAFIHALKDTIAFF 419 (424)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988754
No 21
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.96 E-value=1.2e-26 Score=229.39 Aligned_cols=337 Identities=19% Similarity=0.232 Sum_probs=245.4
Q ss_pred cceeEecCC-C-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC-CCCceeeecCChH-
Q 009673 103 KSLELIASE-N-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGS- 178 (529)
Q Consensus 103 ~~i~L~ase-n-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~-~~~~~~V~~~sGs- 178 (529)
+.|.|-..+ . .+||.|++|+...+.+. -.|||. . -+++-+..++|.++.++.+. .+| |..+.|-
T Consensus 26 DvlPmWVADMDf~~pp~i~~Al~~rvdhG-vfGY~~----~----~~~~~~ai~~w~~~r~~~~i~~e~---i~~~p~VV 93 (388)
T COG1168 26 DVLPMWVADMDFPTPPEIIEALRERVDHG-VFGYPY----G----SDELYAAIAHWFKQRHQWEIKPEW---IVFVPGVV 93 (388)
T ss_pred CcceeeeecccCCCCHHHHHHHHHHHhcC-CCCCCC----C----CHHHHHHHHHHHHHhcCCCCCcce---EEEcCcch
Confidence 567776666 3 58999999999888765 236763 1 12344456699999998874 333 3345555
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCC--CCCCHHHHHHHhhhcCCcEEE
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST--GLVDYDMLEKTAILFRPKLII 256 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~--~~iD~d~le~~i~~~~pklIi 256 (529)
.++..++.++.+|||.|++..|.|...+ +.+...|. ++++.|+..++ +.+|+++||+.+.+.++|+.+
T Consensus 94 pgi~~~I~~~T~~gd~Vvi~tPvY~PF~--------~~i~~n~R--~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~i 163 (388)
T COG1168 94 PGISLAIRALTKPGDGVVIQTPVYPPFY--------NAIKLNGR--KVIENPLVEDDGRYEIDFDALEKAFVDERVKLFI 163 (388)
T ss_pred HhHHHHHHHhCcCCCeeEecCCCchHHH--------HHHhhcCc--EEEeccccccCCcEEecHHHHHHHHhcCCccEEE
Confidence 9999999999999999999998764332 35666676 66666665444 578999999999887889999
Q ss_pred EcCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-----ccc--EEEecccccc--cCCCCe
Q 009673 257 AGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-----YCD--VVTTTTHKSL--RGPRGG 322 (529)
Q Consensus 257 ~~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-----~aD--iv~~S~hK~l--~GprgG 322 (529)
+++|+||+ . .++.+|.+||.+||+.||+|+.|. .++..|..+.|+. .+| +++.|.+|+| +|.+.+
T Consensus 164 LCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHa-Dlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a 242 (388)
T COG1168 164 LCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHA-DLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCA 242 (388)
T ss_pred EeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccc-cccccCCCccchhhcChhhhcceEEEeeccccccchhhhhe
Confidence 99999997 3 368889999999999999999985 5666663333331 345 7778999996 888888
Q ss_pred EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecC
Q 009673 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSG 400 (529)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~ 400 (529)
.++..++ +++.+..+......+++|+...+.|..+|.++- .+++.+..+.+.+|++++.+.|.+ +++++..+
T Consensus 243 ~~Ii~n~-----~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G-~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p 316 (388)
T COG1168 243 YIIISNR-----ELRAKFLKRLKRNGLHGPSALGIIATEAAYNQG-EPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEP 316 (388)
T ss_pred eEEecCH-----HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecC
Confidence 7777664 554444333333446778888888888888864 355688899999999999999988 48888765
Q ss_pred CCCCceEEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 401 GSDNHLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 401 gt~~~~~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
..+++.|+|++..+++..++.+. |++++|.++.+...| +.+.+.+|+.+ . ++.+-+++..+.|+.+++
T Consensus 317 -~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG---~~g~gf~RlN~--a----cpr~~L~eal~ri~~al~ 385 (388)
T COG1168 317 -QGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFG---EEGSGFVRLNF--A----CPRAILEEALERLKRALK 385 (388)
T ss_pred -CCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccC---cCCCceEEEec--C----CCHHHHHHHHHHHHHHHh
Confidence 24688999999999987666555 588999998765444 34568899875 2 334555555555555443
No 22
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.96 E-value=3.6e-26 Score=240.50 Aligned_cols=333 Identities=16% Similarity=0.136 Sum_probs=240.2
Q ss_pred eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 009673 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (529)
Q Consensus 105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~ 184 (529)
+.+++++..++++|++++...+.+.. ...+ .++-+.+++++++++|++.++ +.+.+++|++++..+
T Consensus 11 ~l~~pGP~~~~~~V~~a~~~~~~~~~-----------~~~~-~~~~~~~~~~l~~~~g~~~~~--~vi~~~~gt~a~~~a 76 (401)
T PLN02409 11 HLFVPGPVNIPERVLRAMNRPNEDHR-----------SPAF-PALTKELLEDVKYIFKTKSGT--PFIFPTTGTGAWESA 76 (401)
T ss_pred eeccCCCCCCCHHHHHHhcCCCCCCC-----------CHHH-HHHHHHHHHHHHHHhCCCCCC--EEEEeCCcHHHHHHH
Confidence 55678888899999999976543211 1223 344446779999999997643 346667788999999
Q ss_pred HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCC
Q 009673 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGASA 261 (529)
Q Consensus 185 l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---~~pklIi~~~s~ 261 (529)
+..+++|||+|++.++.|.+. .+. ..+...|. +++.++.+. +..+|++++++.+++ .++++|+++++.
T Consensus 77 ~~~~~~~Gd~Vlv~~~~~~~~---~~~---~~~~~~g~--~v~~v~~~~-~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~ 147 (401)
T PLN02409 77 LTNTLSPGDKVVSFRIGQFSL---LWI---DQMQRLNF--DVDVVESPW-GQGADLDILKSKLRQDTNHKIKAVCVVHNE 147 (401)
T ss_pred HHhcCCCCCEEEEeCCCchhH---HHH---HHHHHcCC--ceEEEECCC-CCCCCHHHHHHHHhhCcCCCccEEEEEeec
Confidence 999999999999998755332 110 12233454 555555553 345899999999986 378999998766
Q ss_pred CCC--CCCHHHHHHH--HHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHH
Q 009673 262 YPR--DFDYPRMRQI--ADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (529)
Q Consensus 262 ~p~--~~d~~~i~~i--a~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l 336 (529)
+++ ..|+++|.++ |+++|+++++|++|+.|....+.... ++|++++|+||||.||.| |+++.++ ++
T Consensus 148 ~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~---~~D~~~~s~~K~l~~P~G~G~l~~~~------~~ 218 (401)
T PLN02409 148 TSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEW---GVDVALTGSQKALSLPTGLGIVCASP------KA 218 (401)
T ss_pred ccccccCCHHHHHHHHhhhccCcEEEEEcccccCCcccccccc---CccEEEEcCccccCcCCCcceeEECH------HH
Confidence 555 7899999999 99999999999998877553322111 589999999999999887 9999987 44
Q ss_pred Hhhhcccc----c-----------C--CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec
Q 009673 337 ESAINNAV----F-----------P--GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (529)
Q Consensus 337 ~~~i~~~~----~-----------p--~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~ 399 (529)
.+++.... + . ...++|+...+.++..+++.+...++++..++..+.++++.+.|.+.|++++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~ 298 (401)
T PLN02409 219 LEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCT 298 (401)
T ss_pred HHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeecc
Confidence 44433210 0 0 01347888889999999998776778888899999999999999889999886
Q ss_pred CCCC--C-ceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 400 GGSD--N-HLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 400 ~gt~--~-~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
+... . .+.++.+ +.+++..++.+.| +++||.+..+. ++.....||||+..+++ ++|+..+..+|.+
T Consensus 299 ~~~~~~s~~v~~~~~-p~~~~~~~l~~~l~~~~~i~i~~G~-----~~~~~~~~Rig~~g~~~----~~~~~~~~~~~~~ 368 (401)
T PLN02409 299 KKPEWRSDTVTAVVV-PEGIDSAEIVKNAWKKYNLSLGLGL-----NKVAGKVFRIGHLGNVN----ELQLLGALAGVEM 368 (401)
T ss_pred CChhhcccceEEEeC-CCCCCHHHHHHHHHHhCCEEEEcCC-----CcccCCEEEEcCCCCCC----HHHHHHHHHHHHH
Confidence 4211 1 2233433 3567777776554 78899996532 22345789999987654 7999999999999
Q ss_pred HHHH
Q 009673 476 GVEI 479 (529)
Q Consensus 476 ~~~~ 479 (529)
++..
T Consensus 369 ~l~~ 372 (401)
T PLN02409 369 VLKD 372 (401)
T ss_pred HHHH
Confidence 8864
No 23
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.96 E-value=1.9e-26 Score=242.46 Aligned_cols=337 Identities=20% Similarity=0.216 Sum_probs=227.9
Q ss_pred eeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHH
Q 009673 105 LELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANF 182 (529)
Q Consensus 105 i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~ 182 (529)
+.|. ++..++|+.+++++...+..... .++.. |.......++.+.+++.+++++|+++++ |..++|+ +++.
T Consensus 19 ~yl~~~~~~~~p~~v~~a~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~l~~~ia~~~~~~~~~----v~~~~~~t~~l~ 91 (397)
T TIGR01976 19 VFFDNPAGTQIPQSVADAVSAALTRSNA--NRGGA-YESSRRADQVVDDAREAVADLLNADPPE----VVFGANATSLTF 91 (397)
T ss_pred EEecCCccCCCCHHHHHHHHHHHHhcCC--CCCCC-chHHHHHHHHHHHHHHHHHHHcCCCCCe----EEEeCCHHHHHH
Confidence 5553 56667899999999887754321 12111 1111222233335668899999998652 4445554 7776
Q ss_pred HHHHhh---cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 183 EVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 183 ~~l~al---l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
.++.++ ++|||+|++.+++|.+++.... ......|. +++.++++++++.+|++++++.+++ ++++|++++
T Consensus 92 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g~--~~~~~~~~~~~~~~~~~~l~~~i~~-~~~lv~i~~ 164 (397)
T TIGR01976 92 LLSRAISRRWGPGDEVIVTRLDHEANISPWL----QAAERAGA--KVKWARVDEATGELHPDDLASLLSP-RTRLVAVTA 164 (397)
T ss_pred HHHHHHHhcCCCCCEEEEcCCchHhHHHHHH----HHHHhcCC--EEEEEeccccCCCcCHHHHHHhcCC-CceEEEEeC
Confidence 666554 7899999999988766532110 11233454 5666666654688999999999987 899999988
Q ss_pred CCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeEEEeeCCCcchhHHH
Q 009673 260 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELE 337 (529)
Q Consensus 260 s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~ 337 (529)
++|++ ..|+++|.++|+++|+++++|++|+.|....+... .++|++++|+||++ ||+.|++++++ ++.
T Consensus 165 ~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~---~~~d~~~~s~~K~~-g~~~G~l~~~~------~~~ 234 (397)
T TIGR01976 165 ASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQA---TGADFLTCSAYKFF-GPHMGILWGRP------ELL 234 (397)
T ss_pred CCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHH---cCCCEEEEechhhc-CCceEEEEEcH------HHH
Confidence 77775 78999999999999999999999976643222111 15899999999997 78899999987 555
Q ss_pred hhhccccc---------CCCCCCChHHHHHHHHHHHHHhcCch--------------HHHHHHHHHHHHHHHHHHHHhc-
Q 009673 338 SAINNAVF---------PGLQGGPHNHTIGGLAVCLKHAQSPE--------------FKVYQNKVVSNCRALASRLVEL- 393 (529)
Q Consensus 338 ~~i~~~~~---------p~~~g~p~~~~iaala~al~~~~~~~--------------~~~~~~~i~~~a~~l~~~L~~~- 393 (529)
+.+..... ....|+++...++++..|++.+...+ +++..++..+.++++.+.|++.
T Consensus 235 ~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~ 314 (397)
T TIGR01976 235 MNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLP 314 (397)
T ss_pred hhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 54432211 12257888888888888887654332 3455666677788888888875
Q ss_pred CcEEecC---CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCC--------CCCCCCCCCCeEEEccCCCccCCCC
Q 009673 394 GYKLVSG---GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV--------PGDKSALVPGGIRIGSPAMTTRGFS 462 (529)
Q Consensus 394 G~~v~~~---gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~--------Pg~~~~~~~~~iRig~~~~tt~g~~ 462 (529)
+++++.+ ....+++.+.+. +.+..++.+.|+++||.++.+.. |+. +...+.||||++.++|
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~--~~~~~~iRis~~~~~t---- 386 (397)
T TIGR01976 315 GVTLYGVARLAARVPTVSFTVH--GLPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGL--NDEGGVVRVGLAHYNT---- 386 (397)
T ss_pred CEEEeCCCCccCCCceEEEEeC--CcCHHHHHHHHHHCCeEEEeCccchHHHHHHhCC--CCCCCeEEEEeeccCC----
Confidence 4888754 123344444443 45667888999999999975421 111 1124689999987765
Q ss_pred HHHHHHHHHHH
Q 009673 463 EKEFVAIADFI 473 (529)
Q Consensus 463 ~~d~~~la~~i 473 (529)
++|++++++.|
T Consensus 387 ~~di~~l~~~l 397 (397)
T TIGR01976 387 AEEVDRLLEAL 397 (397)
T ss_pred HHHHHHHHHhC
Confidence 89999998764
No 24
>PLN00175 aminotransferase family protein; Provisional
Probab=99.96 E-value=3.6e-26 Score=241.30 Aligned_cols=359 Identities=13% Similarity=0.089 Sum_probs=240.6
Q ss_pred hhhcccCChHHHHHHHHHHHHhhcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 009673 80 DYSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (529)
Q Consensus 80 ~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~l 157 (529)
.+++....++.+..+..... ..+.|+|..++. .+++.+.+++...+.+.. ..|+. .....++++...+++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~Lr~aia~~~ 104 (413)
T PLN00175 33 AKRLEKFKTTIFTQMSSLAI-KHGAINLGQGFPNFDGPDFVKEAAIQAIRDGK-NQYAR------GFGVPELNSAIAERF 104 (413)
T ss_pred hHHhhcCCCCHHHHHHHHhh-cCCeEecCCCCCCCCCCHHHHHHHHHHHhcCC-CCcCC------CCCCHHHHHHHHHHH
Confidence 45566667766655444322 336788877664 357888999887765421 12322 222346666667888
Q ss_pred HHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC
Q 009673 158 LAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (529)
Q Consensus 158 a~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~ 236 (529)
.+.+|.+.+.- .+|.+|+|+ +|+..++.++++|||+|++++|.|..+. ..+...|. +++.++++++++
T Consensus 105 ~~~~g~~~~~~-~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~--------~~~~~~g~--~~~~v~~~~~~~ 173 (413)
T PLN00175 105 KKDTGLVVDPE-KEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYE--------ATLSMAGA--KIKTVTLRPPDF 173 (413)
T ss_pred HHHhCCCCCCC-CCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHH--------HHHHHcCC--EEEEEECCcccC
Confidence 88888653210 146668887 8999999999999999999998775442 13344565 666777765568
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCC--CCC---ccc
Q 009673 237 LVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK---YCD 306 (529)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~---~aD 306 (529)
.+|+++|++.+.+ ++|+|++++|+||+ .. ++++|.++|++||++||+|+++ ..+.+.+...+ .+. ...
T Consensus 174 ~~~~~~l~~~~~~-~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y-~~l~~~~~~~s~~~~~~~~~~v 251 (413)
T PLN00175 174 AVPEDELKAAFTS-KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVY-DKLAFEGDHISMASLPGMYERT 251 (413)
T ss_pred CCCHHHHHHhcCc-CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEeccc-CccccCCcccChhhCCCCcCcE
Confidence 9999999999987 89999999999997 33 5788999999999999999984 44444332111 111 123
Q ss_pred EEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (529)
Q Consensus 307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~ 384 (529)
|+++|++|++ +|+|.||+++++ ++.+.+.........+.+...+.++ +.+|+.. ...+++.++++.++++
T Consensus 252 i~i~SfSK~~~~~G~RiG~~v~~~------~l~~~l~~~~~~~~~~~s~~~Q~a~-~~~l~~~-~~~~~~~~~~~~~~~~ 323 (413)
T PLN00175 252 VTMNSLGKTFSLTGWKIGWAIAPP------HLTWGVRQAHSFLTFATATPMQWAA-VAALRAP-ESYYEELKRDYSAKKD 323 (413)
T ss_pred EEEecchhhccCcchheeeeEeCH------HHHHHHHHHHhhccCCCCHHHHHHH-HHHHhCC-HHHHHHHHHHHHHHHH
Confidence 7889999986 789999999987 6666665432211233334434433 3455421 1234777888999999
Q ss_pred HHHHHHHhcCcEEecCCCCCceEEEccCCCCC-cHHHHH-HhHhcCCeEEcCCCCCCCCC----CCCCCeEEEccCCCcc
Q 009673 385 ALASRLVELGYKLVSGGSDNHLVLVDLRPMGI-DGARVE-KILDMASITLNKNSVPGDKS----ALVPGGIRIGSPAMTT 458 (529)
Q Consensus 385 ~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i-~~~~~~-~~L~~~GI~v~~~~~Pg~~~----~~~~~~iRig~~~~tt 458 (529)
.+.+.|++.|+.+..+ ..++++|+++.+.++ +..++. .+++++||.+. ||... ....++|||++.
T Consensus 324 ~l~~~L~~~g~~~~~p-~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~F~~~~~~~~~~iRls~~---- 394 (413)
T PLN00175 324 ILVEGLKEVGFKVYPS-SGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAI----PPSVFYLNPEDGKNLVRFAFC---- 394 (413)
T ss_pred HHHHHHHHCCCeecCC-CeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEe----CchHhCCCCCCCCCEEEEEEc----
Confidence 9999999988887654 235677888754444 344554 45578899994 44321 123468999964
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 009673 459 RGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 459 ~g~~~~d~~~la~~i~~~~~ 478 (529)
..++++++.++.|.+.++
T Consensus 395 --~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 395 --KDEETLRAAVERMKTKLK 412 (413)
T ss_pred --CCHHHHHHHHHHHHHHHh
Confidence 247899999998887764
No 25
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.95 E-value=2.2e-26 Score=239.84 Aligned_cols=335 Identities=19% Similarity=0.172 Sum_probs=232.9
Q ss_pred cCCCCCcHHHHHHHhhhhhccCCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCC-hHHHHHHHH
Q 009673 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLS-GSPANFEVY 185 (529)
Q Consensus 109 asen~~~~~V~eal~~~l~~~y~~G~p~~r~-~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~s-Gs~A~~~~l 185 (529)
.+..++|+.+.+++...+...+ ++|.... ..+..+.+.+ ..+++++++++|++ ++ +|..++ +++++..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~la~~~~~~~~~----~v~~~~g~t~a~~~~~ 78 (373)
T cd06453 6 AATSQKPQPVIDAIVDYYRHYN--ANVHRGVHELSARATDAY-EAAREKVARFINAPSPD----EIIFTRNTTEAINLVA 78 (373)
T ss_pred ccccCCCHHHHHHHHHHHHhcC--CCCCCCccHHHHHHHHHH-HHHHHHHHHHhCCCCCC----eEEEeCCHHHHHHHHH
Confidence 4567889999999988875443 2332211 1122333333 34668899999998 43 344444 458999899
Q ss_pred HhhcC---CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673 186 TAILK---PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (529)
Q Consensus 186 ~all~---pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~ 262 (529)
.++.. |||+|++.+++|.+++.... ...+..|. +++.++++ +++.+|++++++.+.+ ++++|++.+++|
T Consensus 79 ~~l~~~~~~g~~vl~~~~~~~~~~~~~~----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~~ 150 (373)
T cd06453 79 YGLGRANKPGDEIVTSVMEHHSNIVPWQ----QLAERTGA--KLKVVPVD-DDGQLDLEALEKLLTE-RTKLVAVTHVSN 150 (373)
T ss_pred HHhhhcCCCCCEEEECcchhHHHHHHHH----HHHhhcCc--EEEEeecC-CCCCcCHHHHHHHhcC-CceEEEEeCccc
Confidence 99877 99999999988876432111 01123454 55555565 5678999999999987 899999988777
Q ss_pred CC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhh
Q 009673 263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI 340 (529)
Q Consensus 263 p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i 340 (529)
++ ..|+++|.++|+++|++|++|++|+.|....+... .++|++++|+||++.+++.|++++++ ++.+.+
T Consensus 151 ~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~---~~~d~~~~s~~K~~~~~g~g~~~~~~------~~~~~~ 221 (373)
T cd06453 151 VLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQD---LGCDFLAFSGHKMLGPTGIGVLYGKE------ELLEEM 221 (373)
T ss_pred ccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccc---cCCCEEEeccccccCCCCcEEEEEch------HHhhcC
Confidence 65 77999999999999999999999887765322111 16899999999999776669999987 444444
Q ss_pred ccccc--------------------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEec
Q 009673 341 NNAVF--------------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 399 (529)
Q Consensus 341 ~~~~~--------------------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~ 399 (529)
..... ....|+|+...+.++..+++.+...++++..++..++++++.+.|++. |++++.
T Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 301 (373)
T cd06453 222 PPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYG 301 (373)
T ss_pred CCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC
Confidence 32110 011357777788888888887776677888888889999999999885 788774
Q ss_pred CC-CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC---CCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673 400 GG-SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473 (529)
Q Consensus 400 ~g-t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~---~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i 473 (529)
+. ...+++.+.+. +++..++.+.|.++||.+..+...... ....++.||++++.++| ++|++++++.|
T Consensus 302 ~~~~~~~~~~~~~~--~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t----~~di~~~~~~l 373 (373)
T cd06453 302 DAEDRAGVVSFNLE--GIHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNT----EEEIDALVEAL 373 (373)
T ss_pred CccccCCeEEEEEC--CcCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCC----HHHHHHHHhhC
Confidence 31 23445555543 456778888998999998643211000 01125689999887655 79999998864
No 26
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.95 E-value=5.3e-26 Score=237.16 Aligned_cols=335 Identities=19% Similarity=0.222 Sum_probs=229.8
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC-ChHHHHHHHHHhhcC
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAILK 190 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~-r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~-sGs~A~~~~l~all~ 190 (529)
++|+.|++++...+.+... .++. .|..+....+.++ .+++++++++|++..+ +|.++ ++++++..++.++++
T Consensus 11 ~~p~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~la~~~~~~~~~---~v~~~~g~t~al~~~~~~~~~ 84 (376)
T TIGR01977 11 PKPDEVYEAMADFYKNYGG--SPGRGRYRLALRASREVE-ETRQLLAKLFNAPSSA---HVVFTNNATTALNIALKGLLK 84 (376)
T ss_pred CCCHHHHHHHHHHHHhcCC--CCCcccchHHHHHHHHHH-HHHHHHHHHhCcCCCC---eEEEeCCHHHHHHHHHHhccC
Confidence 4678999999877653211 1111 1111111122222 4558899999987531 34445 455899999999999
Q ss_pred CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCH
Q 009673 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDY 268 (529)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~ 268 (529)
+||+|++.+++|+++..... ......|. +++.++++ +++.+|++++++.+++ ++++|++++++|++ ..|+
T Consensus 85 ~gd~vl~~~~~~~~~~~~~~----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~~~~~ 156 (376)
T TIGR01977 85 EGDHVITTPMEHNSVARPLE----CLKEQIGV--EITIVKCD-NEGLISPERIKRAIKT-NTKLIVVSHASNVTGTILPI 156 (376)
T ss_pred CCCEEEECcchhhHHHHHHH----HHHHHcCc--EEEEEecC-CCCCcCHHHHHHhcCC-CCeEEEEECCCCCccccCCH
Confidence 99999999887765431110 01112243 66666665 4578999999999977 89999998877775 7899
Q ss_pred HHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcc-----
Q 009673 269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN----- 342 (529)
Q Consensus 269 ~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~----- 342 (529)
++|.++|+++|+++++|++|+.|....+... .++|++++|+|||+.||.| |+++.+++. ....+..
T Consensus 157 ~~i~~l~~~~~~~livD~a~~~g~~~~~~~~---~~~D~~~~s~~K~l~~p~g~g~l~~~~~~-----~~~~~~~~~~~~ 228 (376)
T TIGR01977 157 EEIGELAQENGIFFILDAAQTAGVIPIDMTE---LAIDMLAFTGHKGLLGPQGTGGLYIREGI-----KLKPLKSGGTGS 228 (376)
T ss_pred HHHHHHHHHcCCEEEEEhhhccCccCCCchh---cCCCEEEecccccccCCCCceEEEEcCCc-----CcCceecCCCcc
Confidence 9999999999999999999998876543322 2689999999999999998 877776642 1010000
Q ss_pred ----------cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCC-C--CCceEE
Q 009673 343 ----------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGG-S--DNHLVL 408 (529)
Q Consensus 343 ----------~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~g-t--~~~~~~ 408 (529)
....+..|+++...++++..+++.+...+.+...++..++++.+.+.|.+ .|++++.+. . ....+.
T Consensus 229 ~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~ 308 (376)
T TIGR01977 229 HSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVS 308 (376)
T ss_pred ccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEE
Confidence 00012246788888999998998887777788888999999999999986 678877531 1 123333
Q ss_pred EccCCCCCcHHHHHHhHhcC-CeEEcCCCCCCC-----CCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 409 VDLRPMGIDGARVEKILDMA-SITLNKNSVPGD-----KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 409 v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~Pg~-----~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
+.+ .++++.++.+.|.+. ||.+..+..-.. .+....+.|||+++.++ +++|++++++.|++
T Consensus 309 ~~~--~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~----t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 309 FTV--EGIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFN----TEEEIEKLLEALSE 375 (376)
T ss_pred EEE--CCCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCC----CHHHHHHHHHHHhh
Confidence 444 356788898888776 999975421000 01223578999987665 48999999999875
No 27
>PRK02948 cysteine desulfurase; Provisional
Probab=99.95 E-value=4.1e-26 Score=238.63 Aligned_cols=340 Identities=14% Similarity=0.144 Sum_probs=233.8
Q ss_pred cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-HHHHHHHHHh
Q 009673 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTA 187 (529)
Q Consensus 109 asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s~A~~~~l~a 187 (529)
++..++|+.|++++...+...+ +.++..+..+..+.+.++ .+++.+++++|++++ +|.+++| ++++..++.+
T Consensus 7 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~----~i~~~~g~t~a~~~~~~~ 79 (381)
T PRK02948 7 AATTPMSKEALQTYQKAASQYF--GNESSLHDIGGTASSLLQ-VCRKTFAEMIGGEEQ----GIYFTSGGTESNYLAIQS 79 (381)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCccccHHHHHHHHHHH-HHHHHHHHHhCCCCC----eEEEeCcHHHHHHHHHHH
Confidence 4556889999999987775433 233333334434334444 577899999999875 3455666 5998888877
Q ss_pred hc----CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673 188 IL----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (529)
Q Consensus 188 ll----~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p 263 (529)
++ ++||+|++.+.+|.+..... ..+...|. ++..++++ +++.+|+++|++.+++ ++++|++++++|+
T Consensus 80 ~~~~~~~~g~~vv~~~~~h~s~~~~~-----~~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~ 150 (381)
T PRK02948 80 LLNALPQNKKHIITTPMEHASIHSYF-----QSLESQGY--TVTEIPVD-KSGLIRLVDLERAITP-DTVLASIQHANSE 150 (381)
T ss_pred HHHhccCCCCEEEECCcccHHHHHHH-----HHHHhCCC--EEEEEeeC-CCCCCCHHHHHHhcCC-CCEEEEEECCcCC
Confidence 75 67999999887776543211 11223454 55566665 4578999999999977 7899999888877
Q ss_pred C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673 264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 340 (529)
Q Consensus 264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i 340 (529)
+ ..|+++|.++|+++|+++++|++|..|....+.... ++|++++|+||++ ||.| |+++.+++. .+ ..+
T Consensus 151 tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~---~~d~~~~s~~K~~-gp~G~G~l~~~~~~----~~-~~~ 221 (381)
T PRK02948 151 IGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEM---GIDSLSVSAHKIY-GPKGVGAVYINPQV----RW-KPV 221 (381)
T ss_pred cEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccC---CCCEEEecHHhcC-CCCcEEEEEEcCCC----CC-CCc
Confidence 6 789999999999999999999998887543332211 5899999999975 7887 999988741 01 111
Q ss_pred cc---cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc-e-EEEccCCCC
Q 009673 341 NN---AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH-L-VLVDLRPMG 415 (529)
Q Consensus 341 ~~---~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~-~-~~v~~~~~~ 415 (529)
.. .......++++...++++..+++... .+.++..+++.++++++.+.|++.|+++...+..++ + .++.+...+
T Consensus 222 ~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~~ 300 (381)
T PRK02948 222 FPGTTHEKGFRPGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKG 300 (381)
T ss_pred ccCCCCCCCcCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeCC
Confidence 00 00112356788888888888888754 356777889999999999999988876654321122 1 122222234
Q ss_pred CcHHHHHHhHhcCCeEEcCCCC-------CC-------CCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 416 IDGARVEKILDMASITLNKNSV-------PG-------DKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 416 i~~~~~~~~L~~~GI~v~~~~~-------Pg-------~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
++++++...|+++||.++.+.. |. ...+...+.|||++..++| ++|++++++.|+++++
T Consensus 301 ~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t----~~di~~l~~~l~~~~~ 373 (381)
T PRK02948 301 IEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTT----KDQIDTTIHALETIGN 373 (381)
T ss_pred CCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCC----HHHHHHHHHHHHHHHH
Confidence 5677777788899999975431 10 0001124689999887654 8999999999998765
No 28
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.95 E-value=9e-26 Score=235.90 Aligned_cols=341 Identities=18% Similarity=0.220 Sum_probs=234.3
Q ss_pred cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh
Q 009673 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (529)
Q Consensus 109 asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al 188 (529)
++..++|+.|++++...+.+. .|+|+..+..+..+.+.++ .+++++++++|+++++ .+...+|++++..++.++
T Consensus 6 aa~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~---i~~t~~~t~a~~~al~~~ 79 (379)
T TIGR03402 6 NATTRVDPEVLEAMLPYFTEY--FGNPSSMHSFGGEVGKAVE-EAREQVAKLLGAEPDE---IIFTSGGTESDNTAIKSA 79 (379)
T ss_pred cCCCCCCHHHHHHHHHHHHhc--CCCCCcccHHHHHHHHHHH-HHHHHHHHHhCCCCCe---EEEeCcHHHHHHHHHHHH
Confidence 455688999999999887643 3555532222233444444 5679999999998653 233345669988888776
Q ss_pred c---CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-
Q 009673 189 L---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR- 264 (529)
Q Consensus 189 l---~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~- 264 (529)
+ .+||+|++...+|.+...... .+...|. +++.++++ +++.+|++++++.+++ +++++++.+++|++
T Consensus 80 ~~~~~~~~~vv~~~~~~~s~~~~~~-----~~~~~G~--~v~~v~~~-~~g~~~~~~l~~~i~~-~~~lv~i~~~~n~tG 150 (379)
T TIGR03402 80 LAAQPEKRHIITTAVEHPAVLSLCQ-----HLEKQGY--KVTYLPVD-EEGRLDLEELRAAITD-DTALVSVMWANNETG 150 (379)
T ss_pred HHhcCCCCeEEEcccccHHHHHHHH-----HHHHcCC--EEEEEccC-CCCcCCHHHHHHhcCC-CcEEEEEEcccCCee
Confidence 3 467899988887765432221 1122354 55566665 4578999999999987 89999888776665
Q ss_pred -CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhc-
Q 009673 265 -DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN- 341 (529)
Q Consensus 265 -~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~- 341 (529)
..|+++|.++|+++|+++++|++|+.|....+.... ++|++++|+|| +.||.| |+++.+++. .+...+.
T Consensus 151 ~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~---~~D~~~~s~~K-~~gp~G~g~l~v~~~~----~~~p~~~g 222 (379)
T TIGR03402 151 TIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEM---NIDMLSLSGHK-LHGPKGVGALYIRKGT----RFRPLLRG 222 (379)
T ss_pred ecccHHHHHHHHHHcCCEEEEECcccccccccCcccC---CCCEEEEcHHH-cCCCCceEEEEECCCC----CCCCcccC
Confidence 789999999999999999999999887654332221 68999999999 678998 999998742 1111010
Q ss_pred -ccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecCCCC--CceEEEccCCCCC
Q 009673 342 -NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGSD--NHLVLVDLRPMGI 416 (529)
Q Consensus 342 -~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~gt~--~~~~~v~~~~~~i 416 (529)
........|+++...+.++..+++... .++++..++..++++.+.+.|.+ .++.+..+... .+.+.+.+ .+.
T Consensus 223 ~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 299 (379)
T TIGR03402 223 GHQERGRRAGTENVPGIVGLGKAAELAT-EHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISF--EYI 299 (379)
T ss_pred CccCCCcCCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEe--cCC
Confidence 000012257889999999998988765 35566677888888889998874 47777653211 12232223 245
Q ss_pred cHHHHHHhHhcCCeEEcCCCC--CCCCC------------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 417 DGARVEKILDMASITLNKNSV--PGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 417 ~~~~~~~~L~~~GI~v~~~~~--Pg~~~------------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
+++++...|+++||.+..+.. ++... ...++.||+|++.+|| ++|++++++.|++++..
T Consensus 300 ~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t----~~di~~~~~~l~~~~~~ 372 (379)
T TIGR03402 300 EGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNT----EEDIDYVLEVLPPIIAR 372 (379)
T ss_pred CHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCC----HHHHHHHHHHHHHHHHH
Confidence 678888899999999975421 11000 1124789999988876 79999999999987764
No 29
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.95 E-value=1.4e-25 Score=235.52 Aligned_cols=333 Identities=19% Similarity=0.217 Sum_probs=226.1
Q ss_pred cceeEecCCC---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673 103 KSLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (529)
Q Consensus 103 ~~i~L~asen---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs 178 (529)
+.|++..++- ..+|++++++...+. +|..||++.|+..|. +...++| +.+++++|.+. .+.+++|+
T Consensus 39 ~~i~~~~~~~lg~~~~~~v~~~~~~~~~-~~~~~~~~s~~~~G~~~~~~~le----~~ia~~~g~~~-----~ii~~~~~ 108 (393)
T TIGR01822 39 EVLNFCANNYLGLSSHPDLIQAAKDALD-EHGFGMSSVRFICGTQDIHKELE----AKIAAFLGTED-----TILYASCF 108 (393)
T ss_pred eEEEeeCCCccccCCCHHHHHHHHHHHH-HhCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCc-----EEEECchH
Confidence 4577665541 247899999988775 344578888887774 4445555 77889999864 24457888
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCc
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPK 253 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pk 253 (529)
+|+..++.++++|||+|++.++.|.+... .+...+. ..+.+ ..+|++++++.+++. +++
T Consensus 109 ~a~~~~~~~l~~~gd~vi~~~~~~~s~~~--------~~~~~~~--~~~~~------~~~d~~~l~~~i~~~~~~~~~~~ 172 (393)
T TIGR01822 109 DANGGLFETLLGAEDAIISDALNHASIID--------GVRLCKA--KRYRY------ANNDMADLEAQLKEARAAGARHR 172 (393)
T ss_pred HHHHHHHHHhCCCCCEEEEeccccHHHHH--------HHHhcCC--ceEEe------CCCCHHHHHHHHHhhhhcCCCce
Confidence 99999999999999999999988765432 2223332 22222 247899999988752 577
Q ss_pred EEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccccccc----CCCC-CcccEEEecccccccCCCCeEEEe
Q 009673 254 LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV----ADPF-KYCDVVTTTTHKSLRGPRGGMIFF 326 (529)
Q Consensus 254 lIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~----~~~~-~~aDiv~~S~hK~l~GprgG~i~~ 326 (529)
+|+++...+++ ..|+++|+++|++||++|++|++|..|....... ...+ ..+|++++|+||+++|+|+||+++
T Consensus 173 ~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~~~ 252 (393)
T TIGR01822 173 LIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFTTA 252 (393)
T ss_pred EEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEEEe
Confidence 88877554443 6899999999999999999999997776532110 0111 257899999999999999999999
Q ss_pred eCCCcchhHHHhhhcccccCC-CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673 327 KKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 405 (529)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~ 405 (529)
++ ++.+.+.....+. ..++++...+++...+++... +.++..+++.++++++.+.|++.|+.+..+ ...
T Consensus 253 ~~------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~ 322 (393)
T TIGR01822 253 RK------EVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLE--ASNELRDRLWANTRYFRERMEAAGFDIKPA--DHP 322 (393)
T ss_pred CH------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCCCCC--CCC
Confidence 87 6666665422222 233444444555555666542 345677888999999999998888876532 223
Q ss_pred eEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 406 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 406 ~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
++.+.+.. ..+..++.+.|.+.||.+.....|. .+.....+||+++.. .+++|++++++.|.++.+
T Consensus 323 ~~~i~~~~-~~~~~~l~~~L~~~gI~v~~~~~~~--~~~~~~~iRis~~~~----~t~edi~~~~~~l~~~~~ 388 (393)
T TIGR01822 323 IIPVMLYD-AVLAQRFARRLLEEGIYVTGFFYPV--VPKGQARIRVQISAA----HTEEQLDRAVEAFTRIGR 388 (393)
T ss_pred EEEEEeCC-HHHHHHHHHHHHHCCeeEeeeCCCC--CCCCCceEEEEECCC----CCHHHHHHHHHHHHHHHH
Confidence 33333221 1245667777777899986322221 111235699987654 458999999999988765
No 30
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.95 E-value=7.8e-26 Score=235.72 Aligned_cols=332 Identities=21% Similarity=0.235 Sum_probs=230.5
Q ss_pred cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC-CCCceeeecCChHHHHHHHHHh
Q 009673 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGSPANFEVYTA 187 (529)
Q Consensus 109 asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~-~~~~~~V~~~sGs~A~~~~l~a 187 (529)
++..++|+.|++++...+.+.+..+..+. +..+.++.+.++ .+++.+++++|+++ ++ .+...+++.++..++.+
T Consensus 6 ~~~~~~p~~v~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~r~~la~~lg~~~~~~---v~~~~~~t~a~~~~~~~ 80 (371)
T PF00266_consen 6 AGTGPMPKSVLEAISDYLRNFYANPHSGV-SHRSREFAEILE-EAREALAKLLGAPPDEE---VVFTSNGTEALNAVASS 80 (371)
T ss_dssp SSS-B-BHHHHHHHHHHHHHSGSSTSTSS-STTSHHHHHHHH-HHHHHHHHHHTSSTTEE---EEEESSHHHHHHHHHHH
T ss_pred CCccCCCHHHHHHHHHHHHHhhhcCcccc-cchhhhhhHHHH-HHHHHHHHhcCCccccc---cccccccchhhhhhhhc
Confidence 56678999999999988876664432222 223344445554 67899999999998 42 23445666899999999
Q ss_pred h---cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC--CC
Q 009673 188 I---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS--AY 262 (529)
Q Consensus 188 l---l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s--~~ 262 (529)
+ +++||+|++.+.+|.+...... ......|. ++..++.+ .++.+|++++++.+++ ++++|++... ..
T Consensus 81 l~~~~~~g~~vl~~~~~~~s~~~~~~----~~~~~~g~--~v~~i~~~-~~~~~~~~~~~~~l~~-~~~lv~~~~~~~~t 152 (371)
T PF00266_consen 81 LLNPLKPGDEVLVTSNEHPSNRYPWE----EIAKRKGA--EVRVIPAD-PGGSLDLEDLEEALNP-DTRLVSISHVENST 152 (371)
T ss_dssp HHHHGTTTCEEEEEESSHHHHHHHHH----HHHHHTTE--EEEEEEEG-TTSSCSHHHHHHHHHT-TESEEEEESBETTT
T ss_pred cccccccccccccccccccccccccc----cccccchh--hhcccccc-ccchhhhhhhhhhhcc-ccceEEeecccccc
Confidence 8 8999999999987766532111 01123354 44455554 4578999999999986 9999988754 34
Q ss_pred CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhc
Q 009673 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 341 (529)
Q Consensus 263 p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~ 341 (529)
+...|+++|.++|+++|+++++|++|+.|.+..+.... ++|++++|.|| |.||+| |++++++ +..++++
T Consensus 153 G~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~---~~D~~~~s~~K-l~gp~G~g~l~v~~------~~~~~~~ 222 (371)
T PF00266_consen 153 GVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDEL---GADFLVFSSHK-LGGPPGLGFLYVRP------EAIERLR 222 (371)
T ss_dssp TBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTT---TESEEEEESTS-TTSSSTEEEEEEEH------HHHHHHH
T ss_pred cEEeeeceehhhhhccCCceeEechhcccccccccccc---ccceeeecccc-cCCCCchhhheehh------hhhhccc
Confidence 45889999999999999999999999998775443222 68999999999 999999 9999998 3333332
Q ss_pred cc--------------------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecC
Q 009673 342 NA--------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG 400 (529)
Q Consensus 342 ~~--------------------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~ 400 (529)
.. ......|+++...+.++..+++.+...+.++..++..+.++++.+.|.+. ++.++.+
T Consensus 223 p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~ 302 (371)
T PF00266_consen 223 PAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGP 302 (371)
T ss_dssp TSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSS
T ss_pred cccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeee
Confidence 11 11123578999999999999998866667888899999999999999885 4555442
Q ss_pred ---CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCC---CCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673 401 ---GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPG---DKSALVPGGIRIGSPAMTTRGFSEKEFVAI 469 (529)
Q Consensus 401 ---gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg---~~~~~~~~~iRig~~~~tt~g~~~~d~~~l 469 (529)
...+.++.+.+ .+.+++.+.+.|++.||.+..+..-. .......++||+|++.++| ++|++++
T Consensus 303 ~~~~~~~~i~~~~~--~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt----~~dv~~l 371 (371)
T PF00266_consen 303 DDEPRRPSIVSFNL--PGSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNT----EEDVDRL 371 (371)
T ss_dssp SCGGBGTTEEEEEE--TTSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSS----HHHHHHH
T ss_pred cccccccceEEEee--cCCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCC----HHHHhhC
Confidence 11223444444 45678899999988899996531000 0000013799999888876 7999875
No 31
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.95 E-value=3e-25 Score=232.20 Aligned_cols=340 Identities=17% Similarity=0.211 Sum_probs=232.6
Q ss_pred cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCceeeecCChH-HHHHHHHH
Q 009673 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGS-PANFEVYT 186 (529)
Q Consensus 109 asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~-~~~~~~~~V~~~sGs-~A~~~~l~ 186 (529)
++..++++.|++++...+.+.|. .|+..+..+....+.+++ +++.+.+.+|. +++ +|.+++|+ +++..++.
T Consensus 6 aa~~~~~~~v~~~~~~~~~~~~~--n~~~~~~~~~~~~~~l~~-a~~~~~~~~~~~~~~----~i~~t~g~teal~~~~~ 78 (382)
T TIGR03403 6 NATTMLDPKVKELMDPFFCDIYG--NPNSLHQFGTATHPAIAE-ALDKLYKGINARDLD----DIIITSCATESNNWVLK 78 (382)
T ss_pred cCCCCCCHHHHHHHHHHHHhcCc--CCccccHHHHHHHHHHHH-HHHHHHHHcCcCCCC----eEEEeCCHHHHHHHHHH
Confidence 34567889999999988876553 344333333444556664 44566667776 443 45556665 89888888
Q ss_pred hhc-----CC-CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 009673 187 AIL-----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (529)
Q Consensus 187 all-----~p-GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s 260 (529)
++. ++ ||+|++...+|+++..... .+...|. +++.++++ +++.+|++++++.+++ ++++++++++
T Consensus 79 ~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~-----~~~~~G~--~v~~v~~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~ 149 (382)
T TIGR03403 79 GVYFDEILKGGKNHIITTEVEHPAVRATCA-----FLESLGV--EVTYLPIN-EQGTITAEQVREAITE-KTALVSVMWA 149 (382)
T ss_pred HHHHhhcccCCCCEEEEcCCccHHHHHHHH-----HHHHCCC--EEEEEecC-CCCCCCHHHHHHhccc-CCeEEEEEcc
Confidence 762 56 4789999888766542211 1223344 66666666 4578999999999987 7899989888
Q ss_pred CCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHH
Q 009673 261 AYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (529)
Q Consensus 261 ~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~ 337 (529)
+||+ ..|+++|.++|+++|+++++|++|..|.+..+... .++|++++|+||+ .||.| |+++++++. .+.
T Consensus 150 ~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~---~~~D~~~~s~~K~-~gp~G~g~l~vr~~~----~~~ 221 (382)
T TIGR03403 150 NNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQK---AGVDFLSFSAHKF-HGPKGVGGLYIRKGV----ELT 221 (382)
T ss_pred cCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCccc---cCCCEEEEcchhh-CCCCceEEEEECCCC----CCC
Confidence 7776 78999999999999999999999887755332211 1689999999997 58888 999988742 111
Q ss_pred hhhc--ccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCC--CCceEEEccC
Q 009673 338 SAIN--NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGS--DNHLVLVDLR 412 (529)
Q Consensus 338 ~~i~--~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt--~~~~~~v~~~ 412 (529)
..+. ........|+++...+.+++.+++... +..+...+++...++++.+.|.+ .|+.++.+.. ..+++.+.+
T Consensus 222 p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~- 299 (382)
T TIGR03403 222 PLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLAN-EYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISI- 299 (382)
T ss_pred CcccCCCCCCCcccCCcChHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEe-
Confidence 1110 000111257788888988888887654 23566677888888899999987 5788876421 123444444
Q ss_pred CCCCcHHHHHHhHhcCCeEEcCCC-C-CCCC------------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 413 PMGIDGARVEKILDMASITLNKNS-V-PGDK------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 413 ~~~i~~~~~~~~L~~~GI~v~~~~-~-Pg~~------------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.++++..+...|.+.||.++.+. + ++.. .+...+.||+|++.++| ++|++++++.|+++++
T Consensus 300 -~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t----~~did~~~~~l~~~~~ 374 (382)
T TIGR03403 300 -KGVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTT----EEEIDYTIEVFKKAVQ 374 (382)
T ss_pred -CCCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCC----HHHHHHHHHHHHHHHH
Confidence 35677788888999999998542 1 0000 01123679999988765 8999999999998876
Q ss_pred H
Q 009673 479 I 479 (529)
Q Consensus 479 ~ 479 (529)
.
T Consensus 375 ~ 375 (382)
T TIGR03403 375 R 375 (382)
T ss_pred H
Confidence 4
No 32
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.95 E-value=6.6e-26 Score=226.32 Aligned_cols=299 Identities=19% Similarity=0.161 Sum_probs=206.4
Q ss_pred hhhcccCChHHHHHHHHHHHHhhccee-EecCCC--CCcHHHHHHHhhhhhc----cCCCCCCCCCCCCCchhHHHHHHH
Q 009673 80 DYSLGEADPEVCEIITKEKERQFKSLE-LIASEN--FTSRAVMEAVGSCLTN----KYSEGLPGKRYYGGNEYIDELETL 152 (529)
Q Consensus 80 ~~~l~~~d~~~~~~~~~e~~~~~~~i~-L~asen--~~~~~V~eal~~~l~~----~y~~G~p~~r~~~g~~~~d~lE~~ 152 (529)
++++....|.+|..+.+.... -...+ |..+.. ++|+-|.+++...... .|+.| || +.++.+.
T Consensus 9 ~~~l~~~~~~vw~e~~~la~e-~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~------~G----~p~L~~a 77 (420)
T KOG0257|consen 9 NRNLSTSKPYVWTEINRLAAE-HKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRG------YG----LPQLRKA 77 (420)
T ss_pred cccccccCCcHHHHHHHHHHh-cCCCCcccCCCCCCCCcHHHHHHHHHHhccchhcccccc------CC----chHHHHH
Confidence 456777888888877654332 23344 766652 4688888888766543 34322 33 2345555
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (529)
Q Consensus 153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v 231 (529)
.++.+++++|.....- .+|.+|+|+ +++..++++++++||+|++.+|.+.+.. ..+.+.|. .++.++.
T Consensus 78 L~k~~se~~~~~~~~~-~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~--------~~~~maG~--tpv~v~~ 146 (420)
T KOG0257|consen 78 LAKAYSEFYGGLLDPD-DEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYI--------PQVVMAGG--TPVFVPL 146 (420)
T ss_pred HHHHHHHHhccccCCc-ccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhh--------hHHhhcCC--cceeecc
Confidence 6688888888764321 368889999 9999999999999999999999765432 35567776 4555444
Q ss_pred C-------CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccc-c
Q 009673 232 D-------ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-V 298 (529)
Q Consensus 232 ~-------~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~ 298 (529)
. ..+|.+|.++++.++++ |||+|++++|+||+ ...+++|++||++||+++|+|++ |.-+++.+. +
T Consensus 147 ~~~~g~~~s~~~~~D~~~le~~~t~-kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDev-Ye~~v~d~~~h 224 (420)
T KOG0257|consen 147 KPKEGNVSSSDWTLDPEELESKITE-KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEV-YEWLVYDGNKH 224 (420)
T ss_pred ccccccccCccccCChHHHHhhccC-CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhH-hHHHhhCCCcc
Confidence 4 35689999999999999 99999999999997 34699999999999999999998 555666553 2
Q ss_pred CCC--CCc---ccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccc--cCCCCCCChHHHHHHHHHHHHHhc-
Q 009673 299 ADP--FKY---CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQ- 368 (529)
Q Consensus 299 ~~~--~~~---aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~- 368 (529)
... +++ ..+.++|++|++ +|||.||+++++ .+........ +-....+|.. .|.+.|+....
T Consensus 225 ~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~------~L~~~~~~vh~~~~~~~~Tp~q---~A~a~a~~~~~~ 295 (420)
T KOG0257|consen 225 IRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPK------HLYSALFPVHQNFVFTCPTPIQ---EASAAAFALELA 295 (420)
T ss_pred eeeecCCchhheEEEeccccceeeeeeeeeeeeechH------HhhhhHHHHhhccccccCcHHH---HHHHHHHhhhhh
Confidence 221 122 347889999986 899999999965 4433322111 1111222222 22222332211
Q ss_pred --Cc---hH-HHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccC
Q 009673 369 --SP---EF-KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR 412 (529)
Q Consensus 369 --~~---~~-~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~ 412 (529)
++ .+ .++.+.++++++.|.+.|.+.|+++..+ ..++++|+|+.
T Consensus 296 ~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p-~gayyl~adfs 344 (420)
T KOG0257|consen 296 CLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTGP-EGAYYLWADFS 344 (420)
T ss_pred ccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCceEEEEecc
Confidence 11 34 4488999999999999999999998765 34677888987
No 33
>PRK08960 hypothetical protein; Provisional
Probab=99.95 E-value=5.9e-25 Score=230.41 Aligned_cols=339 Identities=13% Similarity=0.100 Sum_probs=218.8
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.++|..+++. +|+.+++++...+.+.. .+|+. .....++++...+++.+.+|...+. -+|.+|+|+ +
T Consensus 33 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~it~G~~~ 103 (387)
T PRK08960 33 DVIHLEIGEPDFTTAEPIVAAGQAALAAGH-TRYTA------ARGLPALREAIAGFYAQRYGVDVDP--ERILVTPGGSG 103 (387)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CccCC------CCCCHHHHHHHHHHHHHHhCCCCCh--hhEEEccCcHH
Confidence 56888877753 68999999988775321 12321 1223456656667777766754322 256678887 9
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
|+..++.++++|||+|++++|+|.++.. .+...|. +++.++++.+ ++.+|++++++.+++ ++++++++
T Consensus 104 al~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~ 172 (387)
T PRK08960 104 ALLLASSLLVDPGKHWLLADPGYPCNRH--------FLRLVEG--AAQLVPVGPDSRYQLTPALVERHWNA-DTVGALVA 172 (387)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcCC--eEEEEecCcccCCCCCHHHHHHHhCc-cceEEEEE
Confidence 9999999999999999999998876532 2234454 5555566544 468999999998887 78888888
Q ss_pred CCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC-ccc-EEEecccccc--cCCCCeEEEeeCC
Q 009673 259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD-VVTTTTHKSL--RGPRGGMIFFKKD 329 (529)
Q Consensus 259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aD-iv~~S~hK~l--~GprgG~i~~~~~ 329 (529)
.|+||+ ..+ +++|+++|++||+++++|+++ .++.+.+.....+. ..+ ++++|+||.+ +|.|.||+++++
T Consensus 173 ~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y-~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~- 250 (387)
T PRK08960 173 SPANPTGTLLSRDELAALSQALRARGGHLVVDEIY-HGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPP- 250 (387)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccc-cccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEcCH-
Confidence 899997 444 567777899999999999984 45544322111122 223 7889999986 789999999987
Q ss_pred CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEE
Q 009673 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 409 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v 409 (529)
++.+.+.........+.+...+.++. .++........++..+.+.++++.+.+.|++.|+.+......+.++|+
T Consensus 251 -----~~~~~~~~~~~~~~~~~s~~~q~a~~-~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~~ 324 (387)
T PRK08960 251 -----AAVPELEKLAQNLYISASTPAQHAAL-ACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLYA 324 (387)
T ss_pred -----HHHHHHHHHHhhhccCCCHHHHHHHH-HHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEEE
Confidence 67666654332222233333334332 344321112335667778888999999998888765322223566788
Q ss_pred ccCCCCCcHHHHHH-hHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 410 DLRPMGIDGARVEK-ILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 410 ~~~~~~i~~~~~~~-~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
++.....+..++.+ +++++||.+.++...+. ....++|||++.. ..+++++..+.|.+++
T Consensus 325 ~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~~~iRi~~~~------~~~~l~~al~~l~~~~ 385 (387)
T PRK08960 325 DISAFGGDAFAFCRHFLETEHVAFTPGLDFGR--HQAGQHVRFAYTQ------SLPRLQEAVERIARGL 385 (387)
T ss_pred eccccCCCHHHHHHHHHHhCCEEEcCchHhCC--CCCCCeEEEEecC------CHHHHHHHHHHHHHHH
Confidence 87543345566654 45789999954322111 1124689998642 2466666666655543
No 34
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.95 E-value=6.1e-25 Score=230.38 Aligned_cols=336 Identities=15% Similarity=0.129 Sum_probs=220.9
Q ss_pred hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCce-eeecCChH
Q 009673 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGV-NVQPLSGS 178 (529)
Q Consensus 102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~-~V~~~sGs 178 (529)
.+.|+|..+++. +++.+.+++...+......+|+. ..| ..++.+.+.+++.+.+|...+. - +|.+|+|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lr~aia~~~~~~~g~~~~~--~~~I~it~Gs 101 (388)
T PRK07366 30 KELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLL---FHG---TLDFREAAAQWYEQRFGLAVDP--ETEVLPLIGS 101 (388)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCC---CCC---CHHHHHHHHHHHHHhhCCcCCC--cCeEEECCCc
Confidence 356888888863 57889999887664321122322 112 2356656667777777754321 2 47779998
Q ss_pred -HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEE
Q 009673 179 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLII 256 (529)
Q Consensus 179 -~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi 256 (529)
+|+..++.++++|||+|++.+|.|.++.. .+...|. ++++++++++ .+.+|++++++.+.. ++|+|+
T Consensus 102 ~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~ 170 (388)
T PRK07366 102 QEGTAHLPLAVLNPGDFALLLDPGYPSHAG--------GVYLAGG--QIYPMPLRAENDFLPVFADIPTEVLA-QARLMV 170 (388)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEEECCCccCCCCCHHHHHHhhcc-cceEEE
Confidence 89999999999999999999998765431 2344565 6677777644 367899999888766 799999
Q ss_pred EcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccccc--CCCC--C-ccc--EEEecccccc--cCCCCe
Q 009673 257 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPF--K-YCD--VVTTTTHKSL--RGPRGG 322 (529)
Q Consensus 257 ~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~--~-~aD--iv~~S~hK~l--~GprgG 322 (529)
+++|+||+ .. .+++|.++|++||++||+|++ |..+.+.+.. ++.. . ..+ ++++|++|++ +|.|.|
T Consensus 171 l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~-Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG 249 (388)
T PRK07366 171 LSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFP-YVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIG 249 (388)
T ss_pred EeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecc-hhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhhe
Confidence 99999997 33 466778899999999999998 4454443321 1111 1 112 6789999986 899999
Q ss_pred EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC
Q 009673 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 402 (529)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt 402 (529)
|+++++ ++.+++.....+...+++.....+++ .++.. ....+++.++.+.++++.+.+.|++.|+.+..+ .
T Consensus 250 ~~v~~~------~li~~l~~~~~~~~~~~~~~~~~~a~-~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p-~ 320 (388)
T PRK07366 250 FAIGNA------QLIQALRQVKAVVDFNQYRGILNGAI-AALTG-PQATVQQTVQIFRQRRDAFINALHQIGWPVPLP-E 320 (388)
T ss_pred ehcCCH------HHHHHHHHHHhhcccCCCHHHHHHHH-HHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-C
Confidence 999887 67776654432222222222222222 23431 112346778888899999999998888765443 2
Q ss_pred CCceEEEccCCC-CCcHHHH-HHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 403 DNHLVLVDLRPM-GIDGARV-EKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 403 ~~~~~~v~~~~~-~i~~~~~-~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
.++++|+++... +.+..++ ..+++++||.+. ||.. +...++++||++. .+++++++..+.|.+.
T Consensus 321 ~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~----pg~~f~~~~~~~iRi~~~------~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 321 ATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAAS----PGSGFGKSGEGYVRFALV------HDPDILEEAVERIAAF 387 (388)
T ss_pred eeEEEEEECCcccCCCHHHHHHHHHHhCCEEEe----CchHhCcCCCCeEEEEec------CCHHHHHHHHHHHHHh
Confidence 356778887532 1234555 455588999994 4443 1223578999864 2367888888777653
No 35
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.2e-24 Score=229.05 Aligned_cols=333 Identities=16% Similarity=0.131 Sum_probs=221.8
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.++|..+++. +++.+.+++...+.+....+|+. .| ..++.+.+.+++.+.+|.+.+. ..+|.+|+|+ +
T Consensus 33 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~~----~G---~~~lr~aia~~~~~~~g~~~~~-~~~I~it~G~~~ 104 (399)
T PRK07681 33 KMIDLSIGNPDMPPADFVREEMVHTANQKESYGYTL----SG---IQEFHEAVTEYYNNTHNVILNA-DKEVLLLMGSQD 104 (399)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCCC----CC---cHHHHHHHHHHHHHHhCCCCCC-CCeEEECCCcHH
Confidence 56888877763 67888999887664321122321 12 2355555667777777764321 0257778998 8
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
++..++.++++|||+|++++|.|.++.. .+...|. ++++++++++ ++.+|++++++.+.+ ++|+|+++
T Consensus 105 al~~~~~~~~~~Gd~Vlv~~P~y~~~~~--------~~~~~G~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~v~l~ 173 (399)
T PRK07681 105 GLVHLPMVYANPGDIILVPDPGYTAYET--------GIQMAGA--TSYYMPLKKENDFLPDLELIPEEIAD-KAKMMILN 173 (399)
T ss_pred HHHHHHHHhCCCCCEEEECCCCccchHH--------HHHhcCC--EEEEEecCCCCCCcCCHHHHHHhccc-cceEEEEe
Confidence 9999999999999999999998765431 2344554 7777777654 368999999988876 89999999
Q ss_pred CCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC---CC---cccEEEecccccc--cCCCCeEEE
Q 009673 259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTHKSL--RGPRGGMIF 325 (529)
Q Consensus 259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~---~aDiv~~S~hK~l--~GprgG~i~ 325 (529)
+|+||+ ..+ +++|.++|+++|++||+|+++ ..+.+.+....+ +. ...|++.|+||.+ +|.|.||++
T Consensus 174 ~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i 252 (399)
T PRK07681 174 FPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAY-AEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMI 252 (399)
T ss_pred CCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccc-hhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEe
Confidence 899997 444 778888999999999999995 444433321111 11 1247889999987 788999999
Q ss_pred eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 405 (529)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~ 405 (529)
+++ ++.+++.........+.+...+.++ ..++... ...+++..+.+.++++.+.+.|++.|+.+..+ ..+.
T Consensus 253 ~~~------~l~~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p-~~g~ 323 (399)
T PRK07681 253 GNE------EIVRALTQFKSNTDYGVFLPIQKAA-CAALRNG-AAFCEKNRGIYQERRDTLVDGFRTFGWNVDKP-AGSM 323 (399)
T ss_pred cCH------HHHHHHHHHHhhcccCCCHHHHHHH-HHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-Ceee
Confidence 887 6777665432211122223333332 3344321 12335667778888899999999888876543 2356
Q ss_pred eEEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 406 LVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 406 ~~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
++|+++. .+++..++... ++++||.+. ||.. +...++++||++. .+++++++.++.|++
T Consensus 324 f~~~~l~-~~~~~~~~~~~l~~~~gv~v~----pg~~f~~~~~~~iRis~~------~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 324 FVWAEIP-KGWTSLSFAYALMDRANVVVT----PGHAFGPHGEGFVRIALV------QDEEVLQQAVENIRN 384 (399)
T ss_pred EEEEECC-CCCCHHHHHHHHHHhCCEEEe----CChhhCcCCCCeEEEEec------CCHHHHHHHHHHHHH
Confidence 7788875 34566665555 455999994 4433 2223578999864 246888888888876
No 36
>PRK12414 putative aminotransferase; Provisional
Probab=99.95 E-value=5.8e-25 Score=230.17 Aligned_cols=351 Identities=15% Similarity=0.164 Sum_probs=227.4
Q ss_pred cccCChHHHHHHHHHHHHhhcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673 83 LGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (529)
Q Consensus 83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~ 160 (529)
+....+.+...+... ..+.+.|+|..+++. +++.+.+++...+.... ..| +......++++.++++++++
T Consensus 11 ~~~~~~~~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y------~~~~G~~~lr~~ia~~l~~~ 82 (384)
T PRK12414 11 LPDVGTTIFTVIGQL-AAQHDALNLSQGAPNFAPDPALVEGVARAMRDGH-NQY------APMAGIAALREALAEKTERL 82 (384)
T ss_pred cccCCccHHHHHHHH-HHhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCC-CCc------CCCCCcHHHHHHHHHHHHHH
Confidence 333444455444332 234467889887753 47888888876654321 123 22222346666677889999
Q ss_pred cCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCC
Q 009673 161 FNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD 239 (529)
Q Consensus 161 ~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD 239 (529)
+|++.+.. .+|.+++|+ +++..++.++++|||+|++++|.|.++. ..+...|. +++.++++.+++.+|
T Consensus 83 ~g~~~~~~-~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~d 151 (384)
T PRK12414 83 YGARYDPA-SEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYA--------PIVRLQGA--TPVAIKLSPEDFRVN 151 (384)
T ss_pred hCCCCCCC-CcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchH--------HHHHHcCC--EEEEEecCccccccC
Confidence 99863210 135556666 8999999999999999999999875432 12334454 666777765567899
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccccCCCC---C---cccEE
Q 009673 240 YDMLEKTAILFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K---YCDVV 308 (529)
Q Consensus 240 ~d~le~~i~~~~pklIi~~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~---~aDiv 308 (529)
++++++.+++ ++|+|++++++||+ . .++++|.++|++||+++|+|+++. .+.+.+....++ . ...++
T Consensus 152 ~~~l~~~l~~-~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~i~ 229 (384)
T PRK12414 152 WDEVAAAITP-RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYE-HVVFDGARHHSMARHRELAERSVI 229 (384)
T ss_pred HHHHHhhcCc-ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhh-hccCCCCCccCcccCcCccCcEEE
Confidence 9999999976 89999999999997 2 368889999999999999999954 444333211122 1 12388
Q ss_pred Eecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673 309 TTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 386 (529)
Q Consensus 309 ~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l 386 (529)
+.|+||.+ +|.|.||+++++ ++.+.+.........+.+...+.+ +..+|+. ...+.+..+.+.++++.+
T Consensus 230 ~~SfSK~~~~pGlRiG~~v~~~------~l~~~l~~~~~~~~~~~s~~~q~a-~~~~l~~--~~~~~~~~~~~~~~r~~l 300 (384)
T PRK12414 230 VSSFGKSYHVTGWRVGYCLAPA------ELMDEIRKVHQFMVFSADTPMQHA-FAEALAE--PASYLGLGAFYQRKRDLL 300 (384)
T ss_pred EecccccccCccceEEEEecCH------HHHHHHHHHHhheecCCCcHHHHH-HHHHhcC--ChHHHHHHHHHHHHHHHH
Confidence 89999976 789999999987 666665543211112222333333 2333432 123445667788889999
Q ss_pred HHHHHhcCcEEecCCCCCceEEEccCCC-C-CcHHHHHHhHhcCCeEEcCCCCCCCCC---CCCCCeEEEccCCCccCCC
Q 009673 387 ASRLVELGYKLVSGGSDNHLVLVDLRPM-G-IDGARVEKILDMASITLNKNSVPGDKS---ALVPGGIRIGSPAMTTRGF 461 (529)
Q Consensus 387 ~~~L~~~G~~v~~~gt~~~~~~v~~~~~-~-i~~~~~~~~L~~~GI~v~~~~~Pg~~~---~~~~~~iRig~~~~tt~g~ 461 (529)
.+.|++.|+.+..+ ..++++|+++... + .+.+.+.+.|+++||.+. ||+.. ....++|||++. .
T Consensus 301 ~~~L~~~g~~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~----pg~~f~~~~~~~~~iRis~~------~ 369 (384)
T PRK12414 301 ARELAGSRFELLPS-EGSFFMLARFRHFSDESDSDFVLRLIRDARVATI----PLSAFYTDGTDTGLIRLSFS------K 369 (384)
T ss_pred HHHHHhCCCeecCC-CcceEEEEcccccCCCCHHHHHHHHHHhCCEEEe----cchhhcCCCCCCCEEEEEec------C
Confidence 99999888876644 2355666677531 2 234556678889999994 54431 112468999865 2
Q ss_pred CHHHHHHHHHHHH
Q 009673 462 SEKEFVAIADFIH 474 (529)
Q Consensus 462 ~~~d~~~la~~i~ 474 (529)
.++++++..+.|.
T Consensus 370 ~~~~~~~~~~rl~ 382 (384)
T PRK12414 370 DDATLVEGARRLC 382 (384)
T ss_pred CHHHHHHHHHHHh
Confidence 3677777777664
No 37
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.94 E-value=1.3e-24 Score=225.71 Aligned_cols=332 Identities=14% Similarity=0.079 Sum_probs=225.5
Q ss_pred ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (529)
Q Consensus 104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~ 183 (529)
.+-+++++..+++.|.+++..... . + +.++.+.++ .+++.+++++|+++++. ..+...+|++++..
T Consensus 4 ~~l~~pgp~~~~~~v~~~~~~~~~-~----------~-~~~~~~~~~-~~r~~la~l~~~~~~~~-~i~~t~~~t~al~~ 69 (363)
T TIGR02326 4 YLLLTPGPLTTSRTVKEAMLFDWC-T----------W-DSDYNIVVE-QIRQQLLALATAEEGYT-SVLLQGSGTFAVEA 69 (363)
T ss_pred eeEecCCCCCCCHHHHHHhCCCCC-C----------C-ChHHHHHHH-HHHHHHHHHhCCCCCce-EEEEcCCCHHHHHH
Confidence 456788888999999999865431 1 1 234555555 57799999999975321 12345666799999
Q ss_pred HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-CCcEEEEcCCCC
Q 009673 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASAY 262 (529)
Q Consensus 184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-~pklIi~~~s~~ 262 (529)
++.+++.+||.+++..+.+.+. .+. ......|. +++.++++ +++.+|++++++.++.. +++++.+.+..+
T Consensus 70 ~~~~l~~~~~~vlv~~~~~~~~---~~~---~~a~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~ 140 (363)
T TIGR02326 70 VIGSAVPKDGKLLVVINGAYGA---RIV---QIAEYLGI--PHHVVDTG-EVEPPDVVEVEAILAADPAITHIALVHCET 140 (363)
T ss_pred HHHhcCCCCCeEEEEeCChhhH---HHH---HHHHHcCC--ceEEEeCC-CCCCCCHHHHHHHHhhCCCccEEEEEeecC
Confidence 9999999999887765432111 000 11223454 44555554 45789999999998763 356666665554
Q ss_pred CC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhh
Q 009673 263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 339 (529)
Q Consensus 263 p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~ 339 (529)
++ ..|+++|.++|+++|+++++|++|+.|....+.... ++|++++|+||||.||.| |++++++ +..++
T Consensus 141 ~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~---~~D~~~~s~~K~l~~p~G~G~l~~~~------~~~~~ 211 (363)
T TIGR02326 141 TTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAEL---HIDYLISSANKCIQGVPGFGFVIARQ------AELAA 211 (363)
T ss_pred CccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhc---CccEEEecCccccccCCcceEEEECH------HHHHH
Confidence 44 789999999999999999999998877543322111 589999999999988888 9999987 33333
Q ss_pred hccccc----------------CC-CCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcCcEEecCC
Q 009673 340 INNAVF----------------PG-LQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGYKLVSGG 401 (529)
Q Consensus 340 i~~~~~----------------p~-~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~g 401 (529)
+..... ++ ...+++...+.++..+++.+... ++++..+++.++++++.+.|.+.|+.++.+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 291 (363)
T TIGR02326 212 CKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDD 291 (363)
T ss_pred hhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCc
Confidence 211000 01 11245666777888888776544 3677889999999999999998999886532
Q ss_pred -CCCce-EEEccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 402 -SDNHL-VLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 402 -t~~~~-~~v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
..++. .++.+... .++...+.+.|+++||.+..+. . ....+||||+.... +.+|++++++.|++++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~----~--~~~~~iRi~~~~~~----~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 292 EIQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGK----V--SQVDCFRIGNIGEV----DAADITRLLTAIGKAM 360 (363)
T ss_pred ccCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCc----C--CCCCEEEEecCCCC----CHHHHHHHHHHHHHHh
Confidence 12232 33444321 2456778888989999996432 1 12468999975433 4799999999998875
No 38
>PLN02651 cysteine desulfurase
Probab=99.94 E-value=2.6e-25 Score=231.13 Aligned_cols=324 Identities=17% Similarity=0.207 Sum_probs=222.6
Q ss_pred cCCCCCcHHHHHHHhhhhhccCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHh
Q 009673 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA 187 (529)
Q Consensus 109 asen~~~~~V~eal~~~l~~~y~~G~p~~-r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~a 187 (529)
++..++|+.|++++...+.+.+ +.|+. .+..+....+.++ .+++.+++++|+++++ .+...+|++++..++.+
T Consensus 6 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~---v~~t~~~t~a~~~~l~~ 79 (364)
T PLN02651 6 QATTPIDPRVLDAMLPFLIEHF--GNPHSRTHLYGWESEDAVE-KARAQVAALIGADPKE---IIFTSGATESNNLAIKG 79 (364)
T ss_pred cCCCCCCHHHHHHHHHHHHhCC--CCCChhhhHHHHHHHHHHH-HHHHHHHHHhCCCCCe---EEEeCCHHHHHHHHHHH
Confidence 4556889999999988876544 33432 1111223333444 5679999999998753 23334555887776655
Q ss_pred h----cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673 188 I----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (529)
Q Consensus 188 l----l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p 263 (529)
+ .++||+|++.+.+|++..... ..+...|. +++.++++ +++.+|++++++.+++ +++++++..++|+
T Consensus 80 ~~~~~~~~g~~vl~~~~~h~s~~~~~-----~~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~i~~-~t~lv~v~~~~n~ 150 (364)
T PLN02651 80 VMHFYKDKKKHVITTQTEHKCVLDSC-----RHLQQEGF--EVTYLPVK-SDGLVDLDELAAAIRP-DTALVSVMAVNNE 150 (364)
T ss_pred HHHhccCCCCEEEEcccccHHHHHHH-----HHHHhcCC--EEEEEccC-CCCcCCHHHHHHhcCC-CcEEEEEECCCCC
Confidence 4 578999999888776542211 11122343 55566665 4678999999999987 8999988877666
Q ss_pred C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673 264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 340 (529)
Q Consensus 264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i 340 (529)
+ ..|+++|.++|+++|+++++|++|+.|.+..+.... ++|++++|.||| .||.| |+++++++ ....+
T Consensus 151 tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~---~~D~~~~s~hK~-~gp~G~g~l~v~~~------~~~~l 220 (364)
T PLN02651 151 IGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDL---GVDLMSISGHKI-YGPKGVGALYVRRR------PRVRL 220 (364)
T ss_pred ceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccC---CCCEEEechhhh-CCCCceEEEEEcCC------CCCCC
Confidence 5 789999999999999999999999988765443222 589999999997 68998 99999884 22222
Q ss_pred cccc------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecCC-CC---CceEE
Q 009673 341 NNAV------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGG-SD---NHLVL 408 (529)
Q Consensus 341 ~~~~------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~g-t~---~~~~~ 408 (529)
.... .....|+|+...++++..+++.+.. +.++..++..+.++++.+.|.+ .|++++.+. .+ .+++.
T Consensus 221 ~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~ 299 (364)
T PLN02651 221 EPLMSGGGQERGRRSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLN 299 (364)
T ss_pred CccccCCCccCCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEE
Confidence 2111 1224688999999999999988764 4577778888888889998875 389888741 11 22333
Q ss_pred EccCCCCCcHHHHHHhHhcCCeEEcCCCC--CCC-----C----C---CCCCCeEEEccCCCccCCCCHHHH
Q 009673 409 VDLRPMGIDGARVEKILDMASITLNKNSV--PGD-----K----S---ALVPGGIRIGSPAMTTRGFSEKEF 466 (529)
Q Consensus 409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~--Pg~-----~----~---~~~~~~iRig~~~~tt~g~~~~d~ 466 (529)
+.+ .+++++++.+.|.+ |.++.+.. ++. . + ....+.+|+|+..+|| ++|+
T Consensus 300 ~~~--~~~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t----~~di 363 (364)
T PLN02651 300 LSF--AYVEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTT----EEEV 363 (364)
T ss_pred EEe--CCCCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCC----HHHc
Confidence 334 46778888888876 88865431 110 0 0 0124689999998887 5665
No 39
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=2e-24 Score=219.55 Aligned_cols=340 Identities=16% Similarity=0.147 Sum_probs=248.0
Q ss_pred ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (529)
Q Consensus 104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~ 183 (529)
.+.|++++..+++.|++||.....++++ .++.+.++ .+.+.++.+|+.+... +.+...||+.++.+
T Consensus 6 ~~Ll~PGP~~v~~~V~~am~~~~~~h~s-----------~~F~~~~~-~~~~~L~~v~~t~~~~--~~ll~gsGt~amEA 71 (383)
T COG0075 6 RLLLTPGPVPVPPRVLLAMARPMVGHRS-----------PDFVGIMK-EVLEKLRKVFGTENGD--VVLLSGSGTLAMEA 71 (383)
T ss_pred ceeeeCCCCCCCHHHHHHhcCCCCCCCC-----------HHHHHHHH-HHHHHHHHHhcCCCCc--EEEEcCCcHHHHHH
Confidence 3678999999999999999876554332 23444444 4558899999998422 45667889999999
Q ss_pred HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-CCcEEEEcCCCC
Q 009673 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASAY 262 (529)
Q Consensus 184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-~pklIi~~~s~~ 262 (529)
++.++++|||+||+... |.+++.+. ..+...|. +++.+... +...+|++++++.+++. ..++|.+.+...
T Consensus 72 av~sl~~pgdkVLv~~n---G~FG~R~~---~ia~~~g~--~v~~~~~~-wg~~v~p~~v~~~L~~~~~~~~V~~vH~ET 142 (383)
T COG0075 72 AVASLVEPGDKVLVVVN---GKFGERFA---EIAERYGA--EVVVLEVE-WGEAVDPEEVEEALDKDPDIKAVAVVHNET 142 (383)
T ss_pred HHHhccCCCCeEEEEeC---ChHHHHHH---HHHHHhCC--ceEEEeCC-CCCCCCHHHHHHHHhcCCCccEEEEEeccC
Confidence 99999999999999874 33333331 12344555 44444443 45689999999999853 356777765544
Q ss_pred CC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCC---------
Q 009673 263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDP--------- 330 (529)
Q Consensus 263 p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~--------- 330 (529)
++ ..|+++|+++|++||+++|+|+..+.|....+.... ++|+++++.+|+|.+|.| |++..+++.
T Consensus 143 STGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~w---giDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~ 219 (383)
T COG0075 143 STGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEW---GIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKH 219 (383)
T ss_pred cccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhc---CccEEEecCchhccCCCccceeEECHHHHHHHhcCCC
Confidence 44 779999999999999999999986666543322222 699999999999999999 999998752
Q ss_pred c-ch---hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC-CCCCc
Q 009673 331 V-LG---VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG-GSDNH 405 (529)
Q Consensus 331 ~-~~---~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~-gt~~~ 405 (529)
. .. .++.+..++. ..+..||..+.+.|+..||+.+..++++++.++++++++++++.+++.|++++.. ...+.
T Consensus 220 ~~~ylDL~~~~~~~~~~--~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~ 297 (383)
T COG0075 220 PSFYLDLKKWLKYMEKK--GSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSP 297 (383)
T ss_pred CceeecHHHHHHHHhhc--CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCC
Confidence 0 11 1222223221 2234578999999999999999988899999999999999999999999998873 22222
Q ss_pred eEEEccCCCCCcHHHHH-HhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 406 LVLVDLRPMGIDGARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 406 ~~~v~~~~~~i~~~~~~-~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
.+..-..+.++++.++. ..++++||.+..+. +++....+|||+... .+.+|+..++.+|..++...
T Consensus 298 tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~-----~~l~gkifRIGhMG~----~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 298 TVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQ-----GPLKGKIFRIGHMGN----VRPEDVLAALAALEAALREL 364 (383)
T ss_pred ceEEEECCCCCCcHHHHHHHHHhCCEEecccc-----cccCccEEEEecCcc----CCHHHHHHHHHHHHHHHHHc
Confidence 33333446777765544 46677899985432 345567899998652 56899999999999998754
No 40
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.1e-24 Score=227.84 Aligned_cols=334 Identities=14% Similarity=0.069 Sum_probs=222.1
Q ss_pred hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--CCCCCCceeeecCCh
Q 009673 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSG 177 (529)
Q Consensus 102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g--~~~~~~~~~V~~~sG 177 (529)
...++|..+++. +++.+.+++...+.+.. .+|+. .....++++...+++.+.+| ++++ +|.+++|
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~la~~~~~~~~~~~~~~----~i~~t~g 92 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALADGE-TFYTH------NLGIPELREALARYVSRLHGVATPPE----RIAVTSS 92 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHHhCCCcCcc----eEEEeCC
Confidence 356889888763 57899999887765421 12322 11234566666688888888 4443 4555676
Q ss_pred H-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC--CCCCCCHHHHHHHhhhcCCcE
Q 009673 178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE--STGLVDYDMLEKTAILFRPKL 254 (529)
Q Consensus 178 s-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~--~~~~iD~d~le~~i~~~~pkl 254 (529)
+ +++..++.++++|||+|++.+|.|..+.. .+...|. +++.++++. +++.+|++++++.+++ ++++
T Consensus 93 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~ 161 (382)
T PRK06108 93 GVQALMLAAQALVGPGDEVVAVTPLWPNLVA--------APKILGA--RVVCVPLDFGGGGWTLDLDRLLAAITP-RTRA 161 (382)
T ss_pred hHHHHHHHHHHhcCCCCEEEEeCCCccchHH--------HHHHCCC--EEEEeeCCCCCCCccCCHHHHHHhcCc-cceE
Confidence 6 89999999999999999999998754421 2334454 566666653 2467999999999876 8999
Q ss_pred EEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccc-c-ccCCCC---C--cccEEEecccccc--cCCC
Q 009673 255 IIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAA-S-VVADPF---K--YCDVVTTTTHKSL--RGPR 320 (529)
Q Consensus 255 Ii~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~-~-~~~~~~---~--~aDiv~~S~hK~l--~Gpr 320 (529)
|+++.++||+ .. ++++|.++|+++|+++|+|++|. ++... + ..+..+ . ...+++.|+||++ +|+|
T Consensus 162 i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R 240 (382)
T PRK06108 162 LFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYE-RLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWR 240 (382)
T ss_pred EEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhh-hhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccc
Confidence 9998888887 33 57889999999999999999954 44332 1 111111 1 1347889999976 6888
Q ss_pred CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEec
Q 009673 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 399 (529)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~ 399 (529)
.||+++++ ++.+.+.........+.+...+.+ ...++... ...+++..+++.++++.+.+.|.+. |+.+..
T Consensus 241 iG~~~~~~------~~~~~~~~~~~~~~~~~~~~~q~a-~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 312 (382)
T PRK06108 241 LGWLVAPP------ALGQVLEKLIEYNTSCVAQFVQRA-AVAALDEG-EDFVAELVARLRRSRDHLVDALRALPGVEVAK 312 (382)
T ss_pred eeeeeCCH------HHHHHHHHHHHhcccCCChHHHHH-HHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCCCcccC
Confidence 99999987 676666543211112233333333 33345421 1234677888888899999999874 777665
Q ss_pred CCCCCceEEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 400 GGSDNHLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 400 ~gt~~~~~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
+ ..+.++|+++.. ..+..++.+. ++++||.+. ||.. ++..++++||++.. +++++++..+.|++++
T Consensus 313 p-~~g~~~~~~l~~-~~~~~~~~~~ll~~~gV~v~----pg~~f~~~~~~~~Ris~~~------~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 313 P-DGAMYAFFRIPG-VTDSLALAKRLVDEAGLGLA----PGTAFGPGGEGFLRWCFAR------DPARLDEAVERLRRFL 380 (382)
T ss_pred C-CeeEEEEEeCCC-CCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCEEEEEecC------CHHHHHHHHHHHHHHH
Confidence 4 224556777753 2355556554 578999994 4433 22235789998753 4789999998888765
Q ss_pred H
Q 009673 478 E 478 (529)
Q Consensus 478 ~ 478 (529)
.
T Consensus 381 ~ 381 (382)
T PRK06108 381 A 381 (382)
T ss_pred h
Confidence 3
No 41
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.4e-24 Score=227.99 Aligned_cols=338 Identities=16% Similarity=0.191 Sum_probs=221.4
Q ss_pred hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (529)
Q Consensus 102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs- 178 (529)
.+.|+|..+++. +++.+.+++...+...+. +| .......++++...+++.+.+|...+. .+|.+++|+
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y------~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~ 103 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGWT-HY------TPNAGIPELREAIAEYYKKFYGVDVDV--DNVIVTAGAY 103 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-CC------CCCCCcHHHHHHHHHHHHHHhCCCCCc--ccEEEeCChH
Confidence 356888877764 467888888776643321 12 112223466666667777777754221 255667776
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEE
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~ 257 (529)
+|+..++.++++|||+|++++|.|.+... .+...|. +++.++++++ ++.+|++++++.+++ ++++|++
T Consensus 104 ~al~~~~~~l~~~g~~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~v~i 172 (391)
T PRK08361 104 EATYLAFESLLEEGDEVIIPDPAFVCYVE--------DAKIAEA--KPIRIPLREENEFQPDPDELLELITK-RTRMIVI 172 (391)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHHcCC--EEEEEecCCccCCCCCHHHHHHhccc-ccEEEEE
Confidence 89999999999999999999998765421 2334454 6667777654 468999999999987 7899999
Q ss_pred cCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-cccEEEecccccc--cCCCCeEEEe
Q 009673 258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSL--RGPRGGMIFF 326 (529)
Q Consensus 258 ~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~aDiv~~S~hK~l--~GprgG~i~~ 326 (529)
++|+||+ ..+ +++|.++|+++++++|+|+++. .+.+.+....++ . ..+++++|+||++ +|.|.||+++
T Consensus 173 ~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~ 251 (391)
T PRK08361 173 NYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYE-HFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIA 251 (391)
T ss_pred eCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccc-cceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhcc
Confidence 8889987 566 7888899999999999999954 333322111111 1 2458889999987 6778899999
Q ss_pred eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCC
Q 009673 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS-PEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDN 404 (529)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~-~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~ 404 (529)
++ ++.+.+.........+.+...+.++ ..+++.-.. ...++..+++.++++.+.+.|++. |+.+..+ ..+
T Consensus 252 ~~------~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p-~g~ 323 (391)
T PRK08361 252 PE------QVIKDMIKLHAYIIGNVASFVQIAG-IEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEP-KGA 323 (391)
T ss_pred CH------HHHHHHHHHHhhhccCCChHHHHHH-HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCC-CEE
Confidence 87 5666554322111112222222222 223432111 123666777888888899999885 7776544 234
Q ss_pred ceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 405 HLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 405 ~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.++|+++...+++..++...| +++||.+. ||.. +...++++||++. .+++++++..+.|.++++
T Consensus 324 ~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~----pg~~f~~~~~~~iRi~~~------~~~~~l~~al~~l~~~l~ 389 (391)
T PRK08361 324 FYVFANIDETGMSSEDFAEWLLEKARVVVI----PGTAFGKAGEGYIRISYA------TSKEKLIEAMERMEKALE 389 (391)
T ss_pred EEEEEECCCCCCCHHHHHHHHHHhCCEEEc----CchhhCCCCCCEEEEEec------CCHHHHHHHHHHHHHHHh
Confidence 567778764456676776655 67899994 4443 2223578999864 246778888877777654
No 42
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.94 E-value=3.3e-24 Score=224.45 Aligned_cols=334 Identities=16% Similarity=0.125 Sum_probs=220.2
Q ss_pred hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (529)
Q Consensus 102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs- 178 (529)
.+.++|..+++. +++.+.+++...+......+|+. ..| ..++++.+.+++.+.+|.+.+.- -+|.+++|+
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lr~~ia~~~~~~~~~~~~~~-~~vi~t~G~~ 101 (383)
T TIGR03540 29 VDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPS---YEG---MLAYRQAVADWYKRRFGVELDPE-TEVLSLIGSK 101 (383)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCC---CHHHHHHHHHHHHHhhCCCCCCC-CeEEECCCcH
Confidence 356788777653 57888999887664321123332 122 34566666688888778753211 146678887
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEE
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~ 257 (529)
+++..++.++++|||+|++++|.|..+.. .....|. ++++++++++ ++.+|++++++.+.+ ++++|++
T Consensus 102 ~~l~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~G~--~v~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~i 170 (383)
T TIGR03540 102 EGIAHIPLAFVNPGDIVLVPDPGYPVYRI--------GTLFAGG--EPYEMPLKEENGFLPDFDAIPEDIAK-KAKLMFI 170 (383)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCcchHH--------HHHhcCC--EEEEEecCcccCCccCHHHHHhhccc-cceEEEE
Confidence 89999999999999999999998765421 2334554 6667777644 467899999988876 8999999
Q ss_pred cCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC---CC---cccEEEecccccc--cCCCCeEE
Q 009673 258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTHKSL--RGPRGGMI 324 (529)
Q Consensus 258 ~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~---~aDiv~~S~hK~l--~GprgG~i 324 (529)
++|+||+ ..+ +++|.++|++||+++|+|+++. .+.+.+....+ +. ...+++.|++|++ +|.|.||+
T Consensus 171 ~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~ 249 (383)
T TIGR03540 171 NYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYS-EITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMA 249 (383)
T ss_pred eCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchh-hhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEE
Confidence 9889997 444 7888999999999999999954 33333211111 11 1237789999987 68899999
Q ss_pred EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCC
Q 009673 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 404 (529)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~ 404 (529)
++++ ++.+++.........+.+...+ .++..++... ....++..+++.++++.+.+.|++.|+.+..+. .+
T Consensus 250 i~~~------~l~~~~~~~~~~~~~~~~~~~q-~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~-~~ 320 (383)
T TIGR03540 250 VGNA------DLIAGLGKVKTNVDSGVFQAIQ-YAAIAALNGP-QDVVKEIRKIYQRRRDLLLEALKKIGIDVEKPK-AT 320 (383)
T ss_pred eCCH------HHHHHHHHHHHhcccCCChHHH-HHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCC-cc
Confidence 9887 6766665432211122222333 3333345431 123366677888999999999999888876542 35
Q ss_pred ceEEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673 405 HLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 474 (529)
Q Consensus 405 ~~~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~ 474 (529)
.++|+++. .+++..++... |+++||.+.. |.. +...++++||++. .+++++++..+.|.
T Consensus 321 ~~~~~~l~-~~~~~~~~~~~ll~~~gi~v~~----g~~f~~~~~~~~Ris~~------~~~~~l~~~l~~l~ 381 (383)
T TIGR03540 321 FYVWVPVP-EGYTSAEFAARLLEETGVVVTP----GVGFGEYGEGYIRISLT------VPDERLEEAVARIK 381 (383)
T ss_pred eEEEEECC-CCCCHHHHHHHHHHHCCEEEec----chhhCccCCCeEEEEec------CCHHHHHHHHHHHh
Confidence 66777775 35666666655 5789999954 432 1122468999974 23566666665554
No 43
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.94 E-value=4.6e-25 Score=231.58 Aligned_cols=312 Identities=20% Similarity=0.274 Sum_probs=220.7
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccc
Q 009673 140 YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSG 219 (529)
Q Consensus 140 ~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~ 219 (529)
|++.....++| +.++++||.+. .|.+++|+.|+..++.++++|||+|+ +++.+.. +...+..
T Consensus 49 Y~~~~g~~~Le----eaia~~~g~~~-----vv~t~~Gt~Al~la~~al~~pGD~V~-~~~~f~~--------~~~~i~~ 110 (431)
T cd00617 49 YAGSKSFYDLE----DAVQDLFGFKH-----IIPTHQGRGAENILFSILLKPGRTVP-SNMHFDT--------TRGHIEA 110 (431)
T ss_pred cCCCCCHHHHH----HHHHHHHCCCe-----EEEcCCHHHHHHHHHHHhCCCCCEEc-cCCcccc--------hHHHHHh
Confidence 44445566777 56778888875 25567888999999999999999874 5443322 1223455
Q ss_pred ccceEEEEEcccCCC---------CCCCCHHHHHHHhhhc---CCcEEEEcCCCCCC---CC---CHHHHHHHHHHhCCE
Q 009673 220 TSIYFESMPYRLDES---------TGLVDYDMLEKTAILF---RPKLIIAGASAYPR---DF---DYPRMRQIADAVGAL 281 (529)
Q Consensus 220 ~g~~~~~v~~~v~~~---------~~~iD~d~le~~i~~~---~pklIi~~~s~~p~---~~---d~~~i~~ia~~~g~~ 281 (529)
.|. +++.+++++. ++.+|+++|++.+++. ++++|+++.|+|++ .. ++++|.++|++||++
T Consensus 111 ~Ga--~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~ 188 (431)
T cd00617 111 NGA--VPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIP 188 (431)
T ss_pred CCC--EeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 665 6777777532 3569999999999863 37889998888864 33 467889999999999
Q ss_pred EEEeccccccccc------ccccCCC--------CCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccc--c
Q 009673 282 LMMDMAHISGLVA------ASVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAV--F 345 (529)
Q Consensus 282 livD~ah~~Gli~------~~~~~~~--------~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~--~ 345 (529)
||.|+||..+... .+....+ +.++|.+++|+||.+.++-||+++++++ ++.++++... +
T Consensus 189 li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~-----~l~~~~~~~~~~~ 263 (431)
T cd00617 189 VVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIGGFLALRDD-----ELYEEARQRVVLY 263 (431)
T ss_pred EEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccceEEEeCcH-----HHHHHHHHhcccc
Confidence 9999998765221 1222222 2368999999999988888999999984 5777766422 1
Q ss_pred CC--CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC-------CC
Q 009673 346 PG--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM-------GI 416 (529)
Q Consensus 346 p~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~-------~i 416 (529)
.+ ..|+.+...++|++.+|++... .++.++..+++++|.+.|.+.|++++.+ ...|++++|+... +.
T Consensus 264 ~~~~~~gG~~~r~~~A~A~gL~e~~~---~~~l~~~~~~r~~l~~~L~~~G~~v~~P-~Ggh~v~~d~~~~~~~~~~~~~ 339 (431)
T cd00617 264 EGFVTYGGMAGRDMEALAQGLREAVE---EDYLRHRVEQVRYLGDRLDEAGVPIVEP-AGGHAVFIDAREFLPHIPQEQF 339 (431)
T ss_pred CCccccccccHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHCCCCccCC-CcceEEEEEhHHhcCCCCcccC
Confidence 11 2466677778888778876432 3556667778899999999999998875 3469999987632 12
Q ss_pred cHHH-HHHhHhcCCeEEcC-CCC--CCCCC-C--C--CCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 009673 417 DGAR-VEKILDMASITLNK-NSV--PGDKS-A--L--VPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEA 483 (529)
Q Consensus 417 ~~~~-~~~~L~~~GI~v~~-~~~--Pg~~~-~--~--~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~ 483 (529)
++.. +..++++.||.+.. +++ +.+.. . . ....+|+++| +|+++.++|+++++.|.+++++...+
T Consensus 340 ~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~p---rr~~t~~~~~~~~~~~~~~~~~~~~~ 412 (431)
T cd00617 340 PAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIP---RRVYTQDHMDYVAAAVIALYERREDI 412 (431)
T ss_pred cHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEecc---ccccCHHHHHHHHHHHHHHHhhHhhC
Confidence 3444 45778999999643 221 32221 0 1 1368999988 68999999999999999999876444
No 44
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.94 E-value=3.1e-24 Score=225.09 Aligned_cols=358 Identities=14% Similarity=0.106 Sum_probs=230.4
Q ss_pred cccCChHHHHHHHHHHHHhhcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673 83 LGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (529)
Q Consensus 83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~ 160 (529)
+....+.++..+.....+....++|..+++ .+++.+.+|+...+.+.-..+|+. ..| ..++.+.+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~---~~G---~~~lr~~~~~~l~~~ 81 (389)
T PRK05957 8 MDAVQSPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQA---VQG---IPPLLEAITQKLQQD 81 (389)
T ss_pred HHhcCCcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCC---CHHHHHHHHHHHHHH
Confidence 333444444433333332235588887775 368889999987664321112322 112 234555666888888
Q ss_pred cCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCC
Q 009673 161 FNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD 239 (529)
Q Consensus 161 ~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD 239 (529)
+|.+.+.. .+|.+++|+ +++..++.++++|||+|++++|.|..+.. .+...|. +++.++++ +++.+|
T Consensus 82 ~g~~~~~~-~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d 149 (389)
T PRK05957 82 NGIELNNE-QAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEM--------AITMAGC--QPILVPTD-DNYQLQ 149 (389)
T ss_pred hCCCCCCC-CeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHH--------HHHhcCC--EEEEeecC-CCCCcC
Confidence 89753201 246668887 88888889999999999999988765432 1233454 66666665 457899
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccc-cCCCC---C-c-ccEE
Q 009673 240 YDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF---K-Y-CDVV 308 (529)
Q Consensus 240 ~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~~---~-~-aDiv 308 (529)
+|++++.+++ ++|+|++++++||+ ..+ +++|.++|+++|+++++|+++ ..+.+.+. ...+. + . -.|+
T Consensus 150 ~~~l~~~i~~-~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y-~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (389)
T PRK05957 150 PEAIEQAITP-KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAY-EYFTYDGVKHFSPGSIPGSGNHTIS 227 (389)
T ss_pred HHHHHHhcCc-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccc-hhccCCCCCccChhhCCCccCcEEE
Confidence 9999999987 89999999899987 445 888999999999999999984 44443321 11111 1 1 2378
Q ss_pred Eecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673 309 TTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 386 (529)
Q Consensus 309 ~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l 386 (529)
+.|++|.+ +|.|.||+++++ ++.+++.........+.+...+.++. .+++.- ...+++..+++.++++.+
T Consensus 228 ~~S~SK~~g~~GlRiG~~~~~~------~~~~~~~~~~~~~~~~~~~~~q~~~~-~~l~~~-~~~~~~~~~~~~~~r~~l 299 (389)
T PRK05957 228 LYSLSKAYGFASWRIGYMVIPI------HLLEAIKKIQDTILICPPVVSQYAAL-GALQVG-KSYCQQHLPEIAQVRQIL 299 (389)
T ss_pred EecchhhccCccceeEEEecCH------HHHHHHHHHHhhcccCCCcHHHHHHH-HHHhCC-hHHHHHHHHHHHHHHHHH
Confidence 89999986 788899999987 67776655432222233333333332 234321 122467778888999999
Q ss_pred HHHHHhc-Cc-EEecCCCCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCC
Q 009673 387 ASRLVEL-GY-KLVSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFS 462 (529)
Q Consensus 387 ~~~L~~~-G~-~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~ 462 (529)
.+.|++. ++ .+..+ ..+.++|+++. .+++..++.+.| +++||.+ .||+. +....+++||++.. ..
T Consensus 300 ~~~L~~~~~~~~~~~~-~gg~~~~~~~~-~~~~~~~~~~~l~~~~gv~v----~pg~~f~~~~~~~iRis~~~-----~~ 368 (389)
T PRK05957 300 LKSLGQLQDRCTLHPA-NGAFYCFLKVN-TDLNDFELVKQLIREYRVAV----IPGTTFGMKNGCYLRIAYGA-----LQ 368 (389)
T ss_pred HHHHHhcCCCccccCC-CeeEEEEEeCC-CCCChHHHHHHHHHHCCEEE----ccchhhCCCCCCEEEEEEec-----CC
Confidence 9999874 43 43332 22456677774 356666666665 6799999 45543 12224689999753 24
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009673 463 EKEFVAIADFIHEGVEI 479 (529)
Q Consensus 463 ~~d~~~la~~i~~~~~~ 479 (529)
++++++..+.|.+.++.
T Consensus 369 ~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 369 KATAKEGIERLVQGLKT 385 (389)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 67888888877776653
No 45
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.6e-24 Score=225.32 Aligned_cols=359 Identities=13% Similarity=0.103 Sum_probs=227.5
Q ss_pred chhhhhcccCChHHHHHHHHHHHHhhcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHH
Q 009673 77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (529)
Q Consensus 77 ~~~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~ 154 (529)
.++.+.+.......+..+..........++|..+++. +++.+++++...+.+.. ..|+. .....++++.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~ia 76 (384)
T PRK06348 4 KFLAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKGH-TRYTD------SGGDVELIEEII 76 (384)
T ss_pred hHHHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCcHHHHHHHH
Confidence 3445556555666554444333222356888877753 35677765544433221 12222 222345666666
Q ss_pred HHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC
Q 009673 155 KRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (529)
Q Consensus 155 ~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~ 233 (529)
+++.+.+|...+. -+|.+++|+ +|+..++.++++|||+|++++|.|.++.. .+...|. +++++++++
T Consensus 77 ~~~~~~~~~~~~~--~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~ 144 (384)
T PRK06348 77 KYYSKNYDLSFKR--NEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKD--------QIEMVGG--KPIILETYE 144 (384)
T ss_pred HHHHHHhCCCCCh--hhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCC--EEEEecCCc
Confidence 7777776654321 256678888 89999999999999999999998765432 2334454 566666542
Q ss_pred -CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCC--CCC--
Q 009673 234 -STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-- 303 (529)
Q Consensus 234 -~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~-- 303 (529)
+++.+|+++|++.+++ ++++|+++.|+||+ .. ++++|.++|+++|++||+|++ |.++.+.+.... .+.
T Consensus 145 ~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~-y~~~~~~~~~~~~~~~~~~ 222 (384)
T PRK06348 145 EDGFQINVKKLEALITS-KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEV-YDGFSFYEDFVPMATLAGM 222 (384)
T ss_pred CcCCcCCHHHHHHhhCc-CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecc-cccceeCCCccchhhcCCC
Confidence 3567999999998876 89999998899997 33 478888999999999999998 445544321111 111
Q ss_pred -cccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHH
Q 009673 304 -YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV 380 (529)
Q Consensus 304 -~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~ 380 (529)
...+++.|++|++ +|.|.||+++++ ++.+.+.........+.+...+.+ ++.++... ....++..+.+.
T Consensus 223 ~~~vi~~~SfSK~~~l~GlRiG~~v~~~------~~~~~~~~~~~~~~~~~~~~~q~~-~~~~l~~~-~~~~~~~~~~~~ 294 (384)
T PRK06348 223 PERTITFGSFSKDFAMTGWRIGYVIAPD------YIIETAKIINEGICFSAPTISQRA-AIYALKHR-DTIVPLIKEEFQ 294 (384)
T ss_pred cCcEEEEecchhccCCccccceeeecCH------HHHHHHHHHHHhccCCCCHHHHHH-HHHHHhCc-HHHHHHHHHHHH
Confidence 1237889999986 689999999987 677666543322122333333333 23344321 112355667777
Q ss_pred HHHHHHHHHHHhc-CcEEecCCCCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCc
Q 009673 381 SNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDK-SALVPGGIRIGSPAMT 457 (529)
Q Consensus 381 ~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~t 457 (529)
++++.+.+.|.+. ++.+..+ ..++++|++++..+++..++.+.| +++||.+. ||+. +...+++|||++.
T Consensus 295 ~r~~~~~~~L~~~~~~~~~~p-~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~----pg~~f~~~~~~~iRi~~~--- 366 (384)
T PRK06348 295 KRLEYAYKRIESIPNLSLHPP-KGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVI----PGKAFGESGEGYIRLACT--- 366 (384)
T ss_pred HHHHHHHHHHhcCCCceeccC-CeeEEEEEecccCCCCHHHHHHHHHHhCCEEEc----CchhhccCCCCeEEEEec---
Confidence 8888899999874 6665543 234567878764456666666554 67899994 4443 2223578999963
Q ss_pred cCCCCHHHHHHHHHHHHH
Q 009673 458 TRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 458 t~g~~~~d~~~la~~i~~ 475 (529)
.+++++++..+.|++
T Consensus 367 ---~~~~~l~~al~~l~~ 381 (384)
T PRK06348 367 ---VGIEVLEEAFNRIEK 381 (384)
T ss_pred ---CCHHHHHHHHHHHHh
Confidence 246777777776654
No 46
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.6e-24 Score=226.78 Aligned_cols=340 Identities=15% Similarity=0.123 Sum_probs=224.3
Q ss_pred hcceeEecCC-C--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673 102 FKSLELIASE-N--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (529)
Q Consensus 102 ~~~i~L~ase-n--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs 178 (529)
.+.++|..++ + .+++.+++++...+.+....+|+. ..| ..++.+.+.+++++.+|.+.+.- -+|.+++|+
T Consensus 39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~LR~aia~~l~~~~g~~~~~~-~~I~it~Ga 111 (405)
T PRK06207 39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTE---YRG---DADIRELLAARLAAFTGAPVDAA-DELIITPGT 111 (405)
T ss_pred CCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCC---CCC---CHHHHHHHHHHHHHHhCCCCCCC-CCEEEeCCc
Confidence 4567887544 4 356788888887664322223443 122 23566666788899889643210 146668887
Q ss_pred -HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC---C-CCCCCCHHHHHHHhhhcCCc
Q 009673 179 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD---E-STGLVDYDMLEKTAILFRPK 253 (529)
Q Consensus 179 -~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~---~-~~~~iD~d~le~~i~~~~pk 253 (529)
+++..++.++++|||+|++++|.|.++. ..+...|. ++++++++ + +++.+|+++|++.+++ +++
T Consensus 112 ~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~--------~~~~~~g~--~v~~v~~~~~~~~~~~~~d~~~l~~~~~~-~~k 180 (405)
T PRK06207 112 QGALFLAVAATVARGDKVAIVQPDYFANR--------KLVEFFEG--EMVPVQLDYLSADKRAGLDLDQLEEAFKA-GVR 180 (405)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCchhHH--------HHHHHcCC--EEEEEeccccCcccCCCcCHHHHHHhhhh-cCe
Confidence 9999999999999999999999876542 12344555 55555554 1 2478999999999877 799
Q ss_pred EEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---Cc-cc--EEEecccccc--cCCC
Q 009673 254 LIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY-CD--VVTTTTHKSL--RGPR 320 (529)
Q Consensus 254 lIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~~-aD--iv~~S~hK~l--~Gpr 320 (529)
+|++++|+||+ ..+ +++|.++|++||++||+|++ |..+.+.+....++ .. .| +++.|++|++ +|+|
T Consensus 181 ~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~-Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlR 259 (405)
T PRK06207 181 VFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQL-YSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYR 259 (405)
T ss_pred EEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc-ccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccc
Confidence 99999999997 444 77888999999999999998 44544433211111 11 12 7889999986 6999
Q ss_pred CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEec
Q 009673 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 399 (529)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~ 399 (529)
.||+++++ ++.+++.........+.+.. ...++..+++.- ...+++..+++.++++.+.+.|++. |+.+..
T Consensus 260 iG~ii~~~------~l~~~~~~~~~~~~~~~~~~-~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 331 (405)
T PRK06207 260 LGVAFGSP------AIIDRMEKLQAIVSLRAAGY-SQAVLRTWFSEP-DGWMKDRIARHQAIRDDLLRVLRGVEGVFVRA 331 (405)
T ss_pred eEEEEcCH------HHHHHHHHHHhHhccCCCHH-HHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCCceecC
Confidence 99999887 67766654322222222222 223333344321 1224666777788888898999775 777654
Q ss_pred CCCCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 400 GGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 400 ~gt~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
+ ....++|+++...+++..++.+.| +++||.+. ||.. +...++++||++. ..++++++..+.|.+++
T Consensus 332 p-~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~----pG~~F~~~~~~~~Ris~~------~~~~~l~~al~rl~~~l 400 (405)
T PRK06207 332 P-QAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVT----PGTEFSPHTADSIRLNFS------QDHAAAVAAAERIAQLI 400 (405)
T ss_pred C-CeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEe----CchHhCCCCCCeEEEEec------CCHHHHHHHHHHHHHHH
Confidence 3 234677888864345666666666 57899994 5543 2223578999974 24688888888887776
Q ss_pred HH
Q 009673 478 EI 479 (529)
Q Consensus 478 ~~ 479 (529)
+.
T Consensus 401 ~~ 402 (405)
T PRK06207 401 ER 402 (405)
T ss_pred HH
Confidence 53
No 47
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.2e-24 Score=227.40 Aligned_cols=337 Identities=16% Similarity=0.083 Sum_probs=226.5
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChH-
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS- 178 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs- 178 (529)
..++|..+++. +++.+.+++...+......+|+. .| ...+.+.+.+++.+.+|++ .+. .-+|.+|+|+
T Consensus 45 ~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~----~G---~~~lr~aia~~~~~~~g~~~~~~-~~~I~it~Gs~ 116 (410)
T PRK06290 45 ELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYAD----NG---IQEFKEAAARYMEKVFGVKDIDP-VTEVIHSIGSK 116 (410)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC----CC---cHHHHHHHHHHHHHHcCCCcCCC-cceEEEccCHH
Confidence 35888888764 57788888876543221123331 12 3466666667887777865 221 0147789998
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEE
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~ 257 (529)
+++..++.++++|||.|++++|.|.+... .+...|. +++.++++++ ++.+|++++++.+.. ++|+|++
T Consensus 117 ~al~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l 185 (410)
T PRK06290 117 PALAMLPSCFINPGDVTLMTVPGYPVTGT--------HTKYYGG--EVYNLPLLEENNFLPDLDSIPKDIKE-KAKLLYL 185 (410)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCccHHH--------HHHHcCC--EEEEEecCCCcCCcCCHHHHHHhhcc-cceEEEE
Confidence 89989999999999999999998754321 2334454 7777777754 477899999998876 8999999
Q ss_pred cCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC--CC---cccEEEecccccc--cCCCCeEEE
Q 009673 258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FK---YCDVVTTTTHKSL--RGPRGGMIF 325 (529)
Q Consensus 258 ~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~--~~---~aDiv~~S~hK~l--~GprgG~i~ 325 (529)
++|+||+ ..+ +++|.++|++||++||+|+++. .+.+.+..++. +. ..+|++.|++|.+ +|.|.||++
T Consensus 186 ~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~-~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii 264 (410)
T PRK06290 186 NYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYA-ALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVV 264 (410)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchh-hceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEE
Confidence 9999998 444 6778888999999999999954 44433321111 11 2458999999986 789999999
Q ss_pred eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 405 (529)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~ 405 (529)
+++ ++.+.+.........+.+...+.+ +..+++. ....++..+++.++++.+.+.|++.|+.+..+ ..++
T Consensus 265 ~~~------~l~~~l~~~~~~~~~~~~~~~q~a-a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p-~g~f 334 (410)
T PRK06290 265 GNE------LIVKAFATVKDNNDSGQFIAIQKA-GIYALDH--PEITEKIREKYSRRLDKLVKILNEVGFKAEMP-GGTF 334 (410)
T ss_pred eCH------HHHHHHHHHHhccccCCcHHHHHH-HHHHhhC--cHHHHHHHHHHHHHHHHHHHHHHhCCCeecCC-Ceee
Confidence 987 677766544333223332333332 2234432 12236677888899999999999988876643 2345
Q ss_pred eEEEccCCCC------CcHHHHHHhHhcC-CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 406 LVLVDLRPMG------IDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 406 ~~~v~~~~~~------i~~~~~~~~L~~~-GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
++|+.++..- .+..++.+.|.+. +|.+ +||.. + .+++||++...+ -++++++++.+.|++.++
T Consensus 335 ~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~----~p~~~--~-~~~lRi~~~~~~---~~~~~~~~~~~~l~~~~~ 404 (410)
T PRK06290 335 YLYVKAPKGTKSGIKFENAEEFSQYLIKEKLIST----VPWDD--A-GHFLRFSVTFEA---KDEEEEDRILEEIKRRLS 404 (410)
T ss_pred EEEEECCCccccCCCCCCHHHHHHHHHHhCCEEE----ECCcc--c-cCeEEEEEEccc---ccccchhHHHHHHHHHHh
Confidence 6677775321 2455666666554 5554 46542 1 368999875433 458999999999999887
Q ss_pred H
Q 009673 479 I 479 (529)
Q Consensus 479 ~ 479 (529)
.
T Consensus 405 ~ 405 (410)
T PRK06290 405 D 405 (410)
T ss_pred h
Confidence 4
No 48
>PRK07682 hypothetical protein; Validated
Probab=99.94 E-value=1.6e-24 Score=226.37 Aligned_cols=337 Identities=15% Similarity=0.101 Sum_probs=225.0
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.|+|..+++. +++.+.+++...+.+.+ .+|+. .....++++.+.+++.+.+|.+.+.- -+|.+++|+ +
T Consensus 21 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~g~~~~~~-~~i~~t~G~~~ 92 (378)
T PRK07682 21 GVISLGVGEPDFVTPWNVREASIRSLEQGY-TSYTA------NAGLLELRQEIAKYLKKRFAVSYDPN-DEIIVTVGASQ 92 (378)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCcHHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChHH
Confidence 56889888864 46677888876654322 22322 22245666666788888778753210 146668876 9
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
|+..++.++++|||+|++++|.|.... ......|. +++.++++. +++.+|++++++++.+ ++++|+++
T Consensus 93 al~~~~~~l~~~gd~vl~~~p~y~~~~--------~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~ 161 (378)
T PRK07682 93 ALDVAMRAIINPGDEVLIVEPSFVSYA--------PLVTLAGG--VPVPVATTLENEFKVQPAQIEAAITA-KTKAILLC 161 (378)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCchhhH--------HHHHHcCC--EEEEeecCCccCCCCCHHHHHhhcCc-ccEEEEEE
Confidence 999999999999999999999875432 12333454 555666653 3578999999999877 89999888
Q ss_pred CCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCC--CCC---cccEEEecccccc--cCCCCeEEEe
Q 009673 259 ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK---YCDVVTTTTHKSL--RGPRGGMIFF 326 (529)
Q Consensus 259 ~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~---~aDiv~~S~hK~l--~GprgG~i~~ 326 (529)
.|+||+ .. ++++|.++|++||+++|+|+++. .+.+.+...+ .+. ...+++.|++|++ +|+|.||+++
T Consensus 162 ~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~ 240 (378)
T PRK07682 162 SPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYA-ELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAA 240 (378)
T ss_pred CCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhh-hcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhc
Confidence 899997 33 48899999999999999999854 4443321111 111 2348889999986 6889999999
Q ss_pred eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 406 (529)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~ 406 (529)
++ ++.+++.........+.+...+.+ ...+|+.. ....++.++++.++++.+.+.|++.|+.+..+ ..+++
T Consensus 241 ~~------~~i~~l~~~~~~~~~~~~~~~q~a-~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p-~g~~~ 311 (378)
T PRK07682 241 PV------YFSEAMLKIHQYSMMCAPTMAQFA-ALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVP-GGAFY 311 (378)
T ss_pred CH------HHHHHHHHHHHhhccCCCHHHHHH-HHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC-CeeEE
Confidence 87 677666543221122333333333 33345421 12346677888899999999999988876554 23455
Q ss_pred EEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 407 VLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 407 ~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.|+.+.+.+++..++.+. ++++||.+.+ |.. ++..++++||++. .+++++++..+.|+++++
T Consensus 312 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~p----g~~f~~~~~~~iRis~~------~~~~~l~~~l~~l~~~l~ 375 (378)
T PRK07682 312 AFPSISSTGLSSEEFAEQLLLEEKVAVVP----GSVFGESGEGFIRCSYA------TSLEQLQEAMKRMKRFVE 375 (378)
T ss_pred EEEeccCCCCCHHHHHHHHHHhCCEEEcC----chhhCcCCCCeEEEEeC------CCHHHHHHHHHHHHHHHh
Confidence 666665445566666655 5688999954 432 1223578999864 246899999998888765
No 49
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.94 E-value=4.3e-24 Score=222.31 Aligned_cols=333 Identities=14% Similarity=0.098 Sum_probs=227.1
Q ss_pred eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 009673 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (529)
Q Consensus 105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~ 184 (529)
.-++++...+++.|+++|.... ..+ ..++.+.++ .+++.+++++|++++.. +.+.+.+|+.++..+
T Consensus 7 ~~~~pgP~~~~~~~~~a~~~~~-~~~-----------~~~~~~~~~-~~~~~l~~l~~~~~~~~-~i~~~~~gt~~l~~~ 72 (368)
T PRK13479 7 LLLTPGPLTTSRTVREAMLRDW-GSW-----------DDDFNALTA-SVRAKLVAIATGEEGYT-CVPLQGSGTFSVEAA 72 (368)
T ss_pred eeecCCCCCCCHHHHHHhCCCC-CCC-----------ChHHHHHHH-HHHHHHHHHhCCCCCce-EEEEcCCcHHHHHHH
Confidence 3467888889999999987543 111 123445444 56688999999965321 233456788999999
Q ss_pred HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-CCcEEEEcCCCCC
Q 009673 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASAYP 263 (529)
Q Consensus 185 l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-~pklIi~~~s~~p 263 (529)
+.++..+||+|++.++.+.+. .+ .......|. +++.++++ +++.+|++++++.+++. ++++|++.+++|+
T Consensus 73 ~~~l~~~~~~vlv~~~~~~~~---~~---~~~~~~~g~--~~~~i~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~ 143 (368)
T PRK13479 73 IGSLVPRDGKVLVPDNGAYGA---RI---AQIAEYLGI--AHVVLDTG-EDEPPDAAEVEAALAADPRITHVALVHCETT 143 (368)
T ss_pred HHhccCCCCeEEEEeCCchHH---HH---HHHHHHcCC--cEEEEECC-CCCCCCHHHHHHHHHhCCCCcEEEEEcccCc
Confidence 999999999999887543221 00 011233454 45555554 34679999999998752 4567877777666
Q ss_pred C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673 264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 340 (529)
Q Consensus 264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i 340 (529)
+ ..|+++|.++|+++|+++++|++|..|....+.... ++|++++|+|||+.||.| |++++++ ++.+.+
T Consensus 144 tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~---~~d~~v~s~~K~l~g~~G~G~l~~~~------~~~~~~ 214 (368)
T PRK13479 144 TGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAEL---GIDALISSANKCIEGVPGFGFVIARR------SELEAC 214 (368)
T ss_pred cccccCHHHHHHHHHHcCCEEEEEcccccCCcccccccc---CceEEEecCccccccCCCceEEEECH------HHHHHh
Confidence 5 789999999999999999999888766432221111 589999999999988888 9999987 444443
Q ss_pred cccccC----------------CCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhcCcEEecCCC-
Q 009673 341 NNAVFP----------------GLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGS- 402 (529)
Q Consensus 341 ~~~~~p----------------~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt- 402 (529)
.....+ ....+++...++++..+++.+...+ +++..+++.++++.+.+.|.+.|+.++.+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 294 (368)
T PRK13479 215 KGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEI 294 (368)
T ss_pred hcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchh
Confidence 322111 1112567777888888888665443 5777889999999999999999988764321
Q ss_pred CCc-eEEEccC-CCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 403 DNH-LVLVDLR-PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 403 ~~~-~~~v~~~-~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
... ...+.+. ..+++..++.+.|.+.||.+..+ .. ...+.+|||+..++ +++|++++++.|++++..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g----~~--~~~~~iRis~~~~~----t~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 295 QSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPG----KL--TQVDTFRIGCIGDV----DAADIRRLVAAIAEALYW 363 (368)
T ss_pred cCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecC----CC--CCCCEEEEecCCCC----CHHHHHHHHHHHHHHHHH
Confidence 111 1222222 12356678888898999999543 11 12468999875443 489999999999988753
No 50
>PRK07179 hypothetical protein; Provisional
Probab=99.94 E-value=4e-24 Score=225.60 Aligned_cols=326 Identities=18% Similarity=0.243 Sum_probs=225.1
Q ss_pred cCCCCC----cHHHHHHHhhhhhccCCCCCC-CCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673 109 ASENFT----SRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (529)
Q Consensus 109 asen~~----~~~V~eal~~~l~~~y~~G~p-~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~ 183 (529)
.|.+|+ .|+|++++...+. +|..+.. ...+..|.+...++| +.+++++|.+. + +.+++|++||..
T Consensus 60 ~~~~YL~l~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~----~-~~~~sG~~An~~ 129 (407)
T PRK07179 60 QSNDYLNLSGHPDIIKAQIAALQ-EEGDSLVMSAVFLHDDSPKPQFE----KKLAAFTGFES----C-LLCQSGWAANVG 129 (407)
T ss_pred ecCCccCCCCCHHHHHHHHHHHH-HhCCCCCccccccCCchHHHHHH----HHHHHHhCCCc----E-EEECCHHHHHHH
Confidence 456664 6899999988875 3422221 234555556666776 67889999875 3 557889999999
Q ss_pred HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (529)
Q Consensus 184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p 263 (529)
++.++..+||.|++..+.|.+... .+...|. ++++++ ..|+++|++.+++.++++|++.+++++
T Consensus 130 ~l~~l~~~g~~v~~~~~~h~s~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~lV~v~~v~n~ 193 (407)
T PRK07179 130 LLQTIADPNTPVYIDFFAHMSLWE--------GVRAAGA--QAHPFR------HNDVDHLRRQIERHGPGIIVVDSVYST 193 (407)
T ss_pred HHHHhCCCCCEEEEECCcCHHHHH--------HHHHCCC--eEEEec------CCCHHHHHHHHHhcCCeEEEECCCCCC
Confidence 999999999999987765543321 1223343 444432 368999999997645888888877666
Q ss_pred C--CCCHHHHHHHHHHhCCEEEEecccccccccccc---c-CCCC-CcccEEEecccccccCCCCeEEEeeCCCcchhHH
Q 009673 264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASV---V-ADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVEL 336 (529)
Q Consensus 264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~---~-~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l 336 (529)
+ ..|+++|.++|+++|++||+|++|..|...... . ...+ ..+|++++|+||++ |+++|++++++ ++
T Consensus 194 tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~-g~~~G~l~~~~------~~ 266 (407)
T PRK07179 194 TGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAF-AGRAGIITCPR------EL 266 (407)
T ss_pred CCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhh-hccCeEEEeCH------HH
Confidence 5 789999999999999999999999866432110 0 1111 14699999999998 46799999987 56
Q ss_pred HhhhcccccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCC
Q 009673 337 ESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG 415 (529)
Q Consensus 337 ~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~ 415 (529)
.+.+.....++. .+++....++++.++++.+.. ..+..+++.++++++.+.|.+.|+++... .+++.+.+.. .
T Consensus 267 ~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~--~~~~~~~l~~~~~~l~~~L~~~g~~v~~~---~~i~~l~~~~-~ 340 (407)
T PRK07179 267 AEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIES--ADDRRARLHANARFLREGLSELGYNIRSE---SQIIALETGS-E 340 (407)
T ss_pred HHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCCC---CCEEEEEeCC-H
Confidence 665544333332 345556667766667776532 24567889999999999999888876632 3455554422 1
Q ss_pred CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 416 IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 416 i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
.+...+.+.|.++||.++.-..|+. +..++.|||+++.. ++++|++++++.|++++..
T Consensus 341 ~~~~~~~~~L~~~GI~~~~~~~p~~--~~~~~~lRis~~~~----~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 341 RNTEVLRDALEERNVFGAVFCAPAT--PKNRNLIRLSLNAD----LTASDLDRVLEVCREARDE 398 (407)
T ss_pred HHHHHHHHHHHHCCceEeeecCCCC--CCCCceEEEEECCC----CCHHHHHHHHHHHHHHHHh
Confidence 2345677888899998653223322 22357899998764 4589999999999988764
No 51
>PRK07337 aminotransferase; Validated
Probab=99.94 E-value=2.3e-24 Score=226.05 Aligned_cols=339 Identities=14% Similarity=0.109 Sum_probs=220.7
Q ss_pred hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (529)
Q Consensus 102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs- 178 (529)
.+.++|..+++. +++.+.+++...+.+.. .+|+. .....++++...+++.+.+|...+. .+|.+++|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~~t~G~~ 100 (388)
T PRK07337 30 RDIIHMGIGEPDFTAPEPVVEAAARALRRGV-TQYTS------ALGLAPLREAIAAWYARRFGLDVAP--ERIVVTAGAS 100 (388)
T ss_pred CCEEEeCCcCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHHhCCCCCh--HhEEEecCcH
Confidence 356888777653 57888999887765321 12322 2223456666667777777764322 256667776
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEE
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~ 257 (529)
+|+..++.+++++||+|++++|.|.++.. .+...|. +++.++++++ ++.+|++++++.+.+ ++++|++
T Consensus 101 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l 169 (388)
T PRK07337 101 AALLLACLALVERGDEVLMPDPSYPCNRH--------FVAAAEG--RPVLVPSGPAERFQLTAADVEAAWGE-RTRGVLL 169 (388)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEeecCCccCCcCCHHHHHhhcCc-cceEEEE
Confidence 89998999999999999999998865421 2233454 5666667643 578999999999987 8899999
Q ss_pred cCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-ccc-EEEecccccc--cCCCCeEEEeeC
Q 009673 258 GASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD-VVTTTTHKSL--RGPRGGMIFFKK 328 (529)
Q Consensus 258 ~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aD-iv~~S~hK~l--~GprgG~i~~~~ 328 (529)
+.|+||+ .. ++++|.++|+++|+++|+|+++ .++.+.+...+... +.+ +++.|+||.+ +|+|.||+++++
T Consensus 170 ~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~ 248 (388)
T PRK07337 170 ASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIY-QGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPE 248 (388)
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccc-cccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCH
Confidence 8899987 33 4788889999999999999984 44443322112222 233 5678999987 689999999987
Q ss_pred CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe-cCCCCCceE
Q 009673 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV-SGGSDNHLV 407 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~-~~gt~~~~~ 407 (529)
++.+++.........+.+...+.+++ .++..-....+++.++++.++++.+.+.|++.|+.+. .+ ..++++
T Consensus 249 ------~l~~~l~~~~~~~~~~~s~~~q~~~~-~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p-~~g~f~ 320 (388)
T PRK07337 249 ------ALVGTFEKLAQNLFICASALAQHAAL-ACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMP-DGAFYV 320 (388)
T ss_pred ------HHHHHHHHHHHHhccCCChHHHHHHH-HHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCC-CeeEEE
Confidence 67666654432222223333344332 2343111123466677888889999999988877642 23 345678
Q ss_pred EEccCCC----CCcHHHHH-HhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 408 LVDLRPM----GIDGARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 408 ~v~~~~~----~i~~~~~~-~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
|++++.. .++..++. ++++++||.+.++...+. ....+++||++.. .++++++..++|.+++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~--~~~~~~~Ri~~~~------~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 321 YADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGP--HAPRDYIRLSYAT------SMSRLEEAVARLGKLF 387 (388)
T ss_pred EEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCC--CCCCCEEEEEecC------CHHHHHHHHHHHHHHh
Confidence 8888532 24555554 557889999954322111 1135789999642 3677777777776543
No 52
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.94 E-value=3.4e-24 Score=224.58 Aligned_cols=329 Identities=14% Similarity=0.101 Sum_probs=213.9
Q ss_pred ceeEec--CCCCCcHHHHHHHhhhhhccCCCCCCCC-CCCCC---chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673 104 SLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGG---NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (529)
Q Consensus 104 ~i~L~a--sen~~~~~V~eal~~~l~~~y~~G~p~~-r~~~g---~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG 177 (529)
-|+|.+ --.++++++++|+..+.. .+ +.|.. .+..+ .+.+++ +++.+++++|++. + +.+++|
T Consensus 20 ~~~~~~~~~~~p~~~~~~~a~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~----l~~~lA~~~g~~~----~-~~~~g~ 87 (387)
T PRK09331 20 FINLDPIQRGGILTPEARKALIEYGD-GY--SVCDYCPGRLDQIKKPPIAD----FHEDLAEFLGMDE----A-RVTHGA 87 (387)
T ss_pred ccccChhhcCCCCCHHHHHHHHHHHh-cc--CCCcccccccccccChHHHH----HHHHHHHHhCCCc----E-EEeCCH
Confidence 355544 235789999999988763 22 22211 11111 223344 4478899999975 2 234566
Q ss_pred HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-CCCCCCCHHHHHHHhhhc------
Q 009673 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILF------ 250 (529)
Q Consensus 178 s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-~~~~~iD~d~le~~i~~~------ 250 (529)
++++.+++.+++++||+|++..+.|.+.+. .+...|. +++.++++ .+++.+|++++++.+++.
T Consensus 88 t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~--------~~~~~G~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 157 (387)
T PRK09331 88 REGKFAVMHSLCKKGDYVVLDGLAHYTSYV--------AAERAGL--NVREVPKTGYPEYKITPEAYAEKIEEVKEETGK 157 (387)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCchHHHHH--------HHHHcCC--EEEEEeCccCcCCCcCHHHHHHHHHHhhhccCC
Confidence 699999999999999999998876544321 2334555 66666652 145789999999998753
Q ss_pred CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCC-CeEEEee
Q 009673 251 RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPR-GGMIFFK 327 (529)
Q Consensus 251 ~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gpr-gG~i~~~ 327 (529)
++++|+++++++++ ..|+++|.++|+++|+++++|++|+.|....+... .++|++++|+||++++|. +|+++++
T Consensus 158 ~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~---~g~D~~~~s~~K~l~~~~~~G~l~~~ 234 (387)
T PRK09331 158 PPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKK---LGADFIVGSGHKSMAASAPSGVLATT 234 (387)
T ss_pred CCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHH---cCCCEEEeeCcccccCCCCEEEEEEC
Confidence 68999988776654 78999999999999999999999988754322111 158999999999997654 4999998
Q ss_pred CCCcchhHHHhhhcccccCC-------CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEec
Q 009673 328 KDPVLGVELESAINNAVFPG-------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 399 (529)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~p~-------~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~ 399 (529)
+ ++.+.+.....++ +.++.....++++..+++.+. +..+..++..++++++.+.|.+. |++++.
T Consensus 235 ~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~--~~~~~~~~~~~~~~~l~~~L~~l~g~~~~~ 306 (387)
T PRK09331 235 E------EYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVV--ERVKRWDEEVKKARWFVDELEKIEGFKQLG 306 (387)
T ss_pred H------HHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCEEEec
Confidence 7 5655543321111 111222222333333454432 11233455677888999999997 999884
Q ss_pred CC-CCCceEEEccC-------CCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673 400 GG-SDNHLVLVDLR-------PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 471 (529)
Q Consensus 400 ~g-t~~~~~~v~~~-------~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~ 471 (529)
.. ..+.+..++.. ..+.++..+.+.|.++||..- .++ ....+|+++ .|.+++|++++++
T Consensus 307 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~---~~~-----~~~i~ri~~-----~g~t~~di~~l~~ 373 (387)
T PRK09331 307 EKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGI---KPG-----ATKEFKLST-----YGLTWEQVEYVAD 373 (387)
T ss_pred cCcCcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEE---ccC-----CceEEEEEe-----ccCCHHHHHHHHH
Confidence 21 22334434432 112234568888988999842 111 234467765 3567899999999
Q ss_pred HHHHHHH
Q 009673 472 FIHEGVE 478 (529)
Q Consensus 472 ~i~~~~~ 478 (529)
.|+++++
T Consensus 374 aL~~i~~ 380 (387)
T PRK09331 374 AFKEIAE 380 (387)
T ss_pred HHHHHHH
Confidence 9998765
No 53
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.94 E-value=2.2e-24 Score=227.17 Aligned_cols=341 Identities=18% Similarity=0.188 Sum_probs=228.4
Q ss_pred eeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC-hHHHH
Q 009673 105 LELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPAN 181 (529)
Q Consensus 105 i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~r~~-~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s-Gs~A~ 181 (529)
+.|. ++..++++.|++++...+...+ +.|..+.+ .+.. ..+.-+.+++.+++++|+++++ |..++ |++++
T Consensus 5 ~yld~aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~r~~la~~~g~~~~~----v~~~~g~t~a~ 77 (402)
T TIGR02006 5 IYLDYAATTPVDPRVAEKMMPYLTEKF--GNPASRSHSFGWE-AEEAVENARNQVAELIGADSRE----IVFTSGATESN 77 (402)
T ss_pred EEeeCCcCCCCCHHHHHHHHHHHHhcC--CCCChhhhHHHHH-HHHHHHHHHHHHHHHhCCCCCe----EEEeCCHHHHH
Confidence 4443 3556889999999988775544 33432211 1111 1233335678899999998753 33444 45898
Q ss_pred HHHHHhh----cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 009673 182 FEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 257 (529)
Q Consensus 182 ~~~l~al----l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~ 257 (529)
..++.++ .++||+|++.+++|.+...... .+...|. +++.++++ +++.+|++++++.+++ ++++|++
T Consensus 78 ~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~-----~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~v 148 (402)
T TIGR02006 78 NLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCR-----YLEREGF--EVTYLPPK-SNGLIDLEELKAAIRD-DTILVSI 148 (402)
T ss_pred HHHHHHHHHhhcCCCCEEEECCCccHHHHHHHH-----HHHhcCC--EEEEEccC-CCCcCCHHHHHHhcCC-CCEEEEE
Confidence 8887765 3789999999888765432211 1122344 56666665 4678999999999987 7899988
Q ss_pred cCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchh
Q 009673 258 GASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGV 334 (529)
Q Consensus 258 ~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~ 334 (529)
.+++|++ ..|+++|.++|+++|+++++|++|+.|.+..+... .++|++++|+||++ ||.| |+++++++
T Consensus 149 ~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~---~~~D~~~~s~~K~~-gp~G~G~l~~~~~----- 219 (402)
T TIGR02006 149 MHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNE---LKVDLMSISGHKIY-GPKGIGALYVRRK----- 219 (402)
T ss_pred ECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCccc---cCCCEEEEehhhhc-CCCceEEEEEccC-----
Confidence 8777665 78999999999999999999999998866433221 16899999999965 7887 99988874
Q ss_pred HHHhhhccccc------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCC--CCc
Q 009673 335 ELESAINNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGS--DNH 405 (529)
Q Consensus 335 ~l~~~i~~~~~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt--~~~ 405 (529)
....+..... ....|+++...++++..+++.+. .+++...++..+.++++.+.|++ .++.+..+.. ..+
T Consensus 220 -~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~ 297 (402)
T TIGR02006 220 -PRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPG 297 (402)
T ss_pred -CCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCC
Confidence 1112221111 12357889999999998998765 46677778888888889998877 4666654311 112
Q ss_pred eEEEccCCCCCcHHHHHHhHhcCCeEEcCCC--CCCCC------------CCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673 406 LVLVDLRPMGIDGARVEKILDMASITLNKNS--VPGDK------------SALVPGGIRIGSPAMTTRGFSEKEFVAIAD 471 (529)
Q Consensus 406 ~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~--~Pg~~------------~~~~~~~iRig~~~~tt~g~~~~d~~~la~ 471 (529)
...+.+. +++++.+...|. +|.+..+. .++.. .....+.||+|+..+|| ++|++++++
T Consensus 298 ~~~v~f~--~~~~~~~~~~l~--~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t----~edid~l~~ 369 (402)
T TIGR02006 298 NLNVSFN--YVEGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTT----EEEIDYAVK 369 (402)
T ss_pred eEEEEEe--CcCHHHHHHhcC--CEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCC----HHHHHHHHH
Confidence 2233343 345566666663 66654332 11110 00124789999988765 899999999
Q ss_pred HHHHHHHHH
Q 009673 472 FIHEGVEIT 480 (529)
Q Consensus 472 ~i~~~~~~~ 480 (529)
.|++++...
T Consensus 370 ~l~~~~~~~ 378 (402)
T TIGR02006 370 LVKSAIDKL 378 (402)
T ss_pred HHHHHHHHH
Confidence 999987654
No 54
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.94 E-value=7.2e-24 Score=230.03 Aligned_cols=361 Identities=15% Similarity=0.086 Sum_probs=224.8
Q ss_pred hhhhcccCChHHHHHHHHHHHHh----hcceeEecCCC-----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHH
Q 009673 79 VDYSLGEADPEVCEIITKEKERQ----FKSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDEL 149 (529)
Q Consensus 79 ~~~~l~~~d~~~~~~~~~e~~~~----~~~i~L~asen-----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~l 149 (529)
..+++..+.+++...+..+..+. .+.|+|..++. .+|+.+++++...+... .+|+. .....++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~--~~Y~~------~~G~~~l 190 (517)
T PRK13355 119 KSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDT--EGYSD------SKGLFSA 190 (517)
T ss_pred hhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcC--CCCCC------CcChHHH
Confidence 34556666666544332222222 25688887553 24889999988766422 23443 1223455
Q ss_pred HHHHHHHHHHHcC--CCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEE
Q 009673 150 ETLCQKRALAAFN--LDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 226 (529)
Q Consensus 150 E~~a~~~la~~~g--~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~ 226 (529)
.+.+.+++.+..+ ++++ +|.+++|+ +++..++.++++|||+|++++|.|..+. ..+...|. ++
T Consensus 191 Reaia~~~~~~~~~~~~~~----~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~--------~~~~~~g~--~~ 256 (517)
T PRK13355 191 RKAIMQYAQLKGLPNVDVD----DIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWT--------ACVNLAGG--TA 256 (517)
T ss_pred HHHHHHHHHhcCCCCCChh----HEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHH--------HHHHHCCC--EE
Confidence 5455556555443 4443 57779988 8999999999999999999999775432 12344564 66
Q ss_pred EEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673 227 MPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (529)
Q Consensus 227 v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~ 300 (529)
+.++++++ ++.+|++++++.+++ ++|+|++++|+||+ ..+ +++|.++|++||++||+|++ |..+++.+....
T Consensus 257 v~~~~~~~~~~~~d~~~l~~~~~~-~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~-Y~~~~~~~~~~~ 334 (517)
T PRK13355 257 VHYRCDEQSEWYPDIDDIRSKITS-RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEI-YDRLVMDGLEHT 334 (517)
T ss_pred EEeecCcccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehh-hhhhcCCCCCcc
Confidence 77777654 478999999999987 89999999999997 445 78899999999999999998 445554432111
Q ss_pred CC-C-ccc---EEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHH
Q 009673 301 PF-K-YCD---VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (529)
Q Consensus 301 ~~-~-~aD---iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~ 373 (529)
++ . ..| ++++|++|++ +|+|.||++++.......++.+.++...... .+.+...+. +...+|.. ...+.
T Consensus 335 s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~q~-a~~~aL~~--~~~~~ 410 (517)
T PRK13355 335 SIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNMLANMR-LCSNVPAQS-IVQTALGG--HQSVK 410 (517)
T ss_pred cHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHHhcCc-CCcChHHHH-HHHHHhcC--CccHH
Confidence 21 1 123 3458999985 8999999996531100002333332211111 122222233 33334532 11122
Q ss_pred HH---HHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEccCCCC---CcH-HHHHHhHhcCCeEEcCCCCCCCCC-CC
Q 009673 374 VY---QNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMG---IDG-ARVEKILDMASITLNKNSVPGDKS-AL 444 (529)
Q Consensus 374 ~~---~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~~---i~~-~~~~~~L~~~GI~v~~~~~Pg~~~-~~ 444 (529)
++ .+++.++++.+.+.|++. |+.+..+ ..++++|+++.... .+. +.+.++|++.||.|. ||... ..
T Consensus 411 ~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p-~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~F~~~ 485 (517)
T PRK13355 411 DYLVPGGRVYEQRELVYNALNAIPGISAVKP-KAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIV----QGTGFNWD 485 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccCCC-CeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEe----CcchhCCC
Confidence 22 234566778888999885 8877654 23566676764321 123 456788899999994 55431 22
Q ss_pred CCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 445 VPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 445 ~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.+++|||++. .+++++++.++.|.+.+.
T Consensus 486 ~~~~~Ris~~------~~~~~l~~a~~rl~~~~~ 513 (517)
T PRK13355 486 KPDHFRVVYL------PRLEDLEDAMDRLADFFS 513 (517)
T ss_pred CcCEEEEEeC------CCHHHHHHHHHHHHHHHH
Confidence 4678999972 357889988888888775
No 55
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.94 E-value=2.8e-24 Score=221.67 Aligned_cols=319 Identities=19% Similarity=0.188 Sum_probs=215.4
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCC
Q 009673 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD 193 (529)
Q Consensus 115 ~~~V~eal~~~l~~~y~~G~p~~r~~~g-~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD 193 (529)
+|+|++++...+. +|..++.+.+++.| ++...++ ++.+++++|.+. .+.+++|++++.+++.++++|||
T Consensus 17 ~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~l----~~~la~~~~~~~-----~iv~~sg~~a~~~~~~~~~~~gd 86 (349)
T cd06454 17 HPEVIEAAKEALD-KYGVGAGGSRLISGTSDLHEEL----EEELAEFHGKEA-----ALVFSSGYAANDGVLSTLAGKGD 86 (349)
T ss_pred CHHHHHHHHHHHH-HhCCCCCCcCeecCCchHHHHH----HHHHHHHhCCCC-----EEEeccHHHHHHHHHHHhcCCCC
Confidence 5899999998886 35443333333333 3333444 478889999863 35568999999988899999999
Q ss_pred EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh----cCCcEEEEcCCCCCC--CCC
Q 009673 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL----FRPKLIIAGASAYPR--DFD 267 (529)
Q Consensus 194 ~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~----~~pklIi~~~s~~p~--~~d 267 (529)
+|++.++.|.+... .....|. ++++++ .+|++++++++++ .++++++++++++++ ..|
T Consensus 87 ~Vl~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~ 150 (349)
T cd06454 87 LIISDSLNHASIID--------GIRLSGA--KKRIFK------HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP 150 (349)
T ss_pred EEEEehhhhHHHHH--------HHHHcCC--ceEEec------CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC
Confidence 99999887654321 1223444 444432 3578889988875 357788887666554 789
Q ss_pred HHHHHHHHHHhCCEEEEeccccccccccccc-----CCCCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcc
Q 009673 268 YPRMRQIADAVGALLMMDMAHISGLVAASVV-----ADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINN 342 (529)
Q Consensus 268 ~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-----~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~ 342 (529)
+++|.++|+++|+++|+|++|..|....... .....+.|++++|+||++. ++||+++.++ ++.+.+..
T Consensus 151 ~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~gG~i~~~~------~~~~~~~~ 223 (349)
T cd06454 151 LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFG-AVGGYIAGSK------ELIDYLRS 223 (349)
T ss_pred HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhc-ccCCEEECCH------HHHHHHHH
Confidence 9999999999999999999987775532110 0011257899999999984 5789998876 56665544
Q ss_pred cccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHH
Q 009673 343 AVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARV 421 (529)
Q Consensus 343 ~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~ 421 (529)
...+.. .++.+...++++..+++.... ++...+++.++++.+.+.|.+.|+.++.+. ...+.++.+ ..+.+.+++
T Consensus 224 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~~~~~~~-~~~~~~~~~ 299 (349)
T cd06454 224 YARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELGFPVGGSP-SHIIPPLIG-DDPAKAVAF 299 (349)
T ss_pred hchhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccCCC-CCcEEEEeC-CChHHHHHH
Confidence 332222 234455566666677776543 466788899999999999998888766542 223233222 222345778
Q ss_pred HHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 422 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 422 ~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
.+.|.+.||.+.....+. .....+.|||+++.. .+++|++++++.|+++
T Consensus 300 ~~~L~~~gI~~~~~~~~~--~~~~~~~iRi~~~~~----~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 300 SDALLERGIYVQAIRYPT--VPRGTARLRISLSAA----HTKEDIDRLLEALKEV 348 (349)
T ss_pred HHHHHhCCceEEEecCCc--cCCCCCeEEEEEeCC----CCHHHHHHHHHHHHHh
Confidence 888877899996532211 112246899998654 3489999999999764
No 56
>PRK09082 methionine aminotransferase; Validated
Probab=99.94 E-value=2.1e-24 Score=226.21 Aligned_cols=358 Identities=13% Similarity=0.112 Sum_probs=232.0
Q ss_pred hhcccCChHHHHHHHHHHHHhhcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 009673 81 YSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (529)
Q Consensus 81 ~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la 158 (529)
+++......++..+..... ....|+|..+++. .++.+.+++...+...+ .+|+. .....++++...+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~~a~~l~ 81 (386)
T PRK09082 10 SKLPNVGTTIFTVMSALAA-EHGAINLSQGFPDFDGPPYLVEALAYAMAAGH-NQYPP------MTGVAALREAIAAKTA 81 (386)
T ss_pred hHhhccCccHHHHHHHHHh-hCCEEEecCCCCCCCCCHHHHHHHHHHHHcCC-CCCCC------CCCcHHHHHHHHHHHH
Confidence 3344444445444433221 2355888776653 46888998887664322 22322 1223456666668888
Q ss_pred HHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCC
Q 009673 159 AAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL 237 (529)
Q Consensus 159 ~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~ 237 (529)
+++|.+.+.- .+|.+++|+ +|+..++.++++|||+|++++|.|.++.. .+...|. +++.++++.+++.
T Consensus 82 ~~~~~~~~~~-~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~ 150 (386)
T PRK09082 82 RLYGRQYDAD-SEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAP--------AIELAGG--RAVRVALQPPDFR 150 (386)
T ss_pred HHhCCCCCCC-CcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEEecCccccc
Confidence 8889864311 146667775 99999999999999999999998765421 2344554 6777777655789
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccc-cCCCC--C---ccc
Q 009673 238 VDYDMLEKTAILFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF--K---YCD 306 (529)
Q Consensus 238 iD~d~le~~i~~~~pklIi~~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~~--~---~aD 306 (529)
+|++++++.+++ ++++|++++++||+ . .++++|.++|++||+++|+|++| ..+.+.+. .++.. . ...
T Consensus 151 ~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y-~~~~~~~~~~~s~~~~~~~~~~~ 228 (386)
T PRK09082 151 VDWQRFAAAISP-RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVY-EHIVFDGAGHASVLRHPELRERA 228 (386)
T ss_pred CCHHHHHHhcCc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhh-hhhccCCCCCCChhhCcCccCcE
Confidence 999999999987 89999998888886 2 46889999999999999999985 34443321 12211 1 234
Q ss_pred EEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (529)
Q Consensus 307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~ 384 (529)
+++.|++|++ +|+|.||+++++ ++.+.+.........+.+...+.+ ++..+.. .....++..+.+.++++
T Consensus 229 i~~~S~SK~~~~~G~RiG~iv~~~------~l~~~~~~~~~~~~~~~~~~~q~~-~~~~l~~-~~~~~~~~~~~~~~~~~ 300 (386)
T PRK09082 229 FVVSSFGKTYHVTGWKVGYCVAPA------ALSAEFRKVHQYNTFTVNTPAQLA-LADYLRA-EPEHYLELPAFYQAKRD 300 (386)
T ss_pred EEEeechhhccchhhhhhhhhCCH------HHHHHHHHHHhhhcCCCChHHHHH-HHHHHhC-ChHHHHHHHHHHHHHHH
Confidence 8889999987 789999999987 666665543211112223333332 2333432 12334667778889999
Q ss_pred HHHHHHHhcCcEEecCCCCCceEEEccCC-CCCcHHHHHHh-HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673 385 ALASRLVELGYKLVSGGSDNHLVLVDLRP-MGIDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 462 (529)
Q Consensus 385 ~l~~~L~~~G~~v~~~gt~~~~~~v~~~~-~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~ 462 (529)
.+.+.|++.|+.+..+ ..++++|++++. .+++..++.+. ++++||.+.++...+. .+...+++||++. ..
T Consensus 301 ~~~~~L~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~-~~~~~~~~Ri~~~------~~ 372 (386)
T PRK09082 301 RFRAALANSRFKLLPC-EGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYA-DPFPHRLVRLCFA------KQ 372 (386)
T ss_pred HHHHHHHhCCCcccCC-CeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCC-CCCCCCEEEEEec------CC
Confidence 9999999888876554 235667778753 24566677665 5889999954321111 1223578999964 24
Q ss_pred HHHHHHHHHHHHH
Q 009673 463 EKEFVAIADFIHE 475 (529)
Q Consensus 463 ~~d~~~la~~i~~ 475 (529)
++++++..+.|.+
T Consensus 373 ~~~l~~~~~rl~~ 385 (386)
T PRK09082 373 EETLDAAAERLCQ 385 (386)
T ss_pred HHHHHHHHHHHhh
Confidence 6777777776653
No 57
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.94 E-value=5.5e-24 Score=221.72 Aligned_cols=330 Identities=16% Similarity=0.157 Sum_probs=214.6
Q ss_pred cceeEec--CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCch---hHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673 103 KSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNE---YIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~a--sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~---~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG 177 (529)
..|+|.+ .-..+..++.+++.. |..|+.++|+.+|.. +.+.+++ .++.+++++|++. +.+ ..+|
T Consensus 7 ~~~~~~~~~~~g~~~~~~~~a~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~-~~e~lA~~~g~~~----~~i-~~g~ 75 (370)
T TIGR02539 7 GSINLNPLQRGGVLTEAARKALVE-----FGDGYSVCDFCGGRLDQITKPPIHD-FLEDLAEFLGMDE----ARV-THGA 75 (370)
T ss_pred cccccChhhhCCCCcHHHHHHHHH-----HhhccccccccccccccccchHHHH-HHHHHHHHhCCCc----eEE-ECCh
Confidence 4566655 234567777777754 444666666544432 1112222 2356899999986 233 4666
Q ss_pred HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhh------c
Q 009673 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAIL------F 250 (529)
Q Consensus 178 s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~------~ 250 (529)
++++..++.++++|||+|++..++|.+.+. .+...|. +++.++.+. .++.+|+++|++.+++ .
T Consensus 76 ~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 145 (370)
T TIGR02539 76 REGKFAVMHALCKEGDWVVLDGLAHYTSYV--------AAERAGL--NVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGK 145 (370)
T ss_pred HHHHHHHHHHhhCCCCEEEECCcccHHHHH--------HHHHcCC--EEEEEecCCcccCCcCHHHHHHHHHHhhhccCC
Confidence 699999999999999999998877644321 2344565 555555543 2478999999999864 2
Q ss_pred CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccC-CCCeEEEee
Q 009673 251 RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG-PRGGMIFFK 327 (529)
Q Consensus 251 ~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~G-prgG~i~~~ 327 (529)
++++|+++++++++ ..|+++|.++|+++|+++++|++|..|........ .+.|++++|+||++++ .+.|+++++
T Consensus 146 ~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~---~~~di~v~s~sK~~~~~g~~G~l~~~ 222 (370)
T TIGR02539 146 PPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKE---IGADFIVGSGHKSMAASGPCGVLGMS 222 (370)
T ss_pred CcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHH---cCCCEEEeeCcccccCCCCEEEEEEC
Confidence 67899988777665 78999999999999999999999988743211111 1579999999999853 345999998
Q ss_pred CCCcchhHHHhhhcccccCCC-------CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC
Q 009673 328 KDPVLGVELESAINNAVFPGL-------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG 400 (529)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~p~~-------~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~ 400 (529)
+ ++.+.+.....|.. .++......+++..++.... +..+. ..+..++++++.+.|++.|++++..
T Consensus 223 ~------~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~l~~-~~~~~~~~~~l~~~L~~~g~~~~~~ 294 (370)
T TIGR02539 223 E------EWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVV-ERVKR-WDEEVKKTRWFVAELEDIGFIQLGQ 294 (370)
T ss_pred H------HHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHhCCcEEEcc
Confidence 7 67666654332211 12222122333333454321 12222 3344555678999999999987531
Q ss_pred -CCCCceEEEccCCC-------CCcHHHHHHhHhcCCeE-EcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673 401 -GSDNHLVLVDLRPM-------GIDGARVEKILDMASIT-LNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 471 (529)
Q Consensus 401 -gt~~~~~~v~~~~~-------~i~~~~~~~~L~~~GI~-v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~ 471 (529)
...+++++++++.. ..+...+.+.|.+.||. +. |+ .++.|||++. +.+++|++++++
T Consensus 295 ~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir----~~-----~~~~iRis~~-----~~t~e~i~~l~~ 360 (370)
T TIGR02539 295 KPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIR----SG-----QTKYFKLSVY-----GLTKEQVEYVVD 360 (370)
T ss_pred CCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCcccc----CC-----cceEEEEEec-----CCCHHHHHHHHH
Confidence 23466777765321 01234688889889997 42 22 2468999862 357899999999
Q ss_pred HHHHHHH
Q 009673 472 FIHEGVE 478 (529)
Q Consensus 472 ~i~~~~~ 478 (529)
.|+++++
T Consensus 361 ~L~~~~~ 367 (370)
T TIGR02539 361 SFEEIVE 367 (370)
T ss_pred HHHHHHH
Confidence 9988764
No 58
>PRK08068 transaminase; Reviewed
Probab=99.94 E-value=9.1e-24 Score=221.57 Aligned_cols=333 Identities=15% Similarity=0.095 Sum_probs=215.9
Q ss_pred cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.|+|..++. .+++.+.+++...+......+|+. ....+++++...+++.+.+|.+.+. .-+|.+++|+ +
T Consensus 33 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~g~~~lr~aia~~~~~~~g~~~~~-~~~i~it~G~~~ 105 (389)
T PRK08068 33 DVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSP------FRGYPFLKEAAADFYKREYGVTLDP-ETEVAILFGGKA 105 (389)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCC-CccEEEcCCcHH
Confidence 4588876653 245778888877664322123322 1123466666667777777854321 0145567877 8
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
++..++.++++|||+|++++|.|+.+.. .+...|. +++.++++++ ++.+|++++++.+.+ ++++|+++
T Consensus 106 ~l~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~i~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~ 174 (389)
T PRK08068 106 GLVELPQCLMNPGDTILVPDPGYPDYLS--------GVALARA--QFETMPLIAENNFLPDYTKIPEEVAE-KAKLMYLN 174 (389)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEeecccccCCCCCHHHHHHhccc-cceEEEEE
Confidence 8888899999999999999998765421 2344565 6667777644 468899999998876 89999999
Q ss_pred CCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC-CC-----cccEEEecccccc--cCCCCeEEE
Q 009673 259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP-FK-----YCDVVTTTTHKSL--RGPRGGMIF 325 (529)
Q Consensus 259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~-~~-----~aDiv~~S~hK~l--~GprgG~i~ 325 (529)
+|+||+ ..+ +++|.++|+++|+++|+|+++ ..+.+.+..+.+ +. ...+++.|++|++ +|.|.||++
T Consensus 175 ~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay-~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~ 253 (389)
T PRK08068 175 YPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAY-GAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAV 253 (389)
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhh-hhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEe
Confidence 899997 444 567888899999999999984 333333211111 11 1238889999987 789999999
Q ss_pred eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 405 (529)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~ 405 (529)
+++ ++.+.+.....+...+.+...+.++. .++.. .....+..++++.++++.+.+.|++.|+.+..+ ..++
T Consensus 254 ~~~------~l~~~l~~~~~~~~~~~~~~~q~~~~-~~l~~-~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~-~g~~ 324 (389)
T PRK08068 254 GNE------SVIEAINLLQDHLFVSLFGAIQDAAI-EALLS-DQSCVAELVARYESRRNAFISACREIGWEVDAP-KGSF 324 (389)
T ss_pred cCH------HHHHHHHHHHhhccCCCChHHHHHHH-HHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-CeeE
Confidence 887 67777655433322333333333332 23321 113346778888999999999998888876543 2345
Q ss_pred eEEEccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673 406 LVLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 474 (529)
Q Consensus 406 ~~~v~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~ 474 (529)
++|+++.. +++..++.+.|. ++||.+.. |.. +...++++||++. ..++.+++..+.|.
T Consensus 325 ~~~v~~~~-~~~~~~~~~~l~~~~gi~v~p----g~~f~~~~~~~iRi~~~------~~~~~l~~al~~l~ 384 (389)
T PRK08068 325 FAWMPVPK-GYTSEQFADLLLEKAHVAVAP----GNGFGEHGEGYVRVGLL------TDEERLREAVERIG 384 (389)
T ss_pred EEEEECCC-CCCHHHHHHHHHHhCCEEEec----chHhCccCCCeEEEEEc------CCHHHHHHHHHHHH
Confidence 66777753 456677766665 58999954 332 2223578999973 22455555555443
No 59
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.94 E-value=1.1e-23 Score=220.77 Aligned_cols=333 Identities=16% Similarity=0.129 Sum_probs=215.8
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.++|..+++. +++.+.+++...+.......|+. ....+++.+.+.+++.+.+|.+.+.- -+|.+|+|+ +
T Consensus 32 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~g~~~~~~-~~ii~t~G~~~ 104 (385)
T PRK09276 32 DVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPS------YEGMLEFRKAVADWYKRRFGVELDPE-TEVISLIGSKE 104 (385)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCCcHHHHHHHHHHHHHHhCCCCCCC-CcEEEccCcHH
Confidence 56888877763 57788999887664321112332 11234566666678877778643210 136668887 8
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
++..++.++++|||+|++++|.|..+.. .....|. +++.++++.+ ++.+|++++++.+.. ++++|+++
T Consensus 105 ~i~~~~~~~~~~gd~Vl~~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~l~ 173 (385)
T PRK09276 105 GIAHIPLAFVNPGDVVLVPDPGYPVYKI--------GTIFAGG--EPYFMPLKEENGFLPDLDAIPEDVAK-KAKLMFIN 173 (385)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcChHH--------HHHHcCC--EEEEEecCCCCCCcCCHHHHHHhccc-cceEEEEe
Confidence 9999999999999999999997754321 2234555 6666667544 467899999988876 89999999
Q ss_pred CCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC---CC---cccEEEecccccc--cCCCCeEEE
Q 009673 259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTHKSL--RGPRGGMIF 325 (529)
Q Consensus 259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~---~aDiv~~S~hK~l--~GprgG~i~ 325 (529)
+|+||+ ..+ +++|.++|++||++||+|+++. .+.+.+....+ ++ ...+++.|++|.+ +|.|.||++
T Consensus 174 ~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i 252 (385)
T PRK09276 174 YPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYS-EIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAV 252 (385)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchh-heecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeee
Confidence 899997 444 6788889999999999999954 33332211111 11 1247889999986 788999999
Q ss_pred eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 405 (529)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~ 405 (529)
+++ ++.+.+.........+.+.. ...+...++... ....++..+++.++++.+.+.|++.|+.+..+ ..+.
T Consensus 253 ~~~------~l~~~~~~~~~~~~~~~~~~-~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~ 323 (385)
T PRK09276 253 GNA------DLIAGLGKVKSNVDSGVFQA-IQEAGIAALNGP-QEVVEELRKIYQERRDILVEGLRKLGLEVEPP-KATF 323 (385)
T ss_pred CCH------HHHHHHHHHHhhccCCCCHH-HHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-Ccce
Confidence 887 66666654322111222222 222223344321 12336667778888999999999888876654 2355
Q ss_pred eEEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673 406 LVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 474 (529)
Q Consensus 406 ~~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~ 474 (529)
++|+++. .+++..++.+. ++++||.+. ||.. ....++++||++. ..++++.+..+.|.
T Consensus 324 ~~~v~~~-~~~~~~~l~~~ll~~~gi~v~----~g~~f~~~~~~~~Ris~~------~~~~~l~~~l~~l~ 383 (385)
T PRK09276 324 YVWAPVP-KGYTSAEFATLLLDKAGVVVT----PGNGFGEYGEGYFRIALT------VPDERIEEAVERIK 383 (385)
T ss_pred EEEEECC-CCCCHHHHHHHHHHhCCEEEC----CchhhCCCCCCeEEEEeC------CCHHHHHHHHHHHh
Confidence 6788775 34566666555 567899994 4433 1223578999864 23566666665554
No 60
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.94 E-value=2.2e-24 Score=219.48 Aligned_cols=323 Identities=18% Similarity=0.185 Sum_probs=227.0
Q ss_pred CCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-c
Q 009673 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-L 189 (529)
Q Consensus 111 en~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l 189 (529)
...+....++++...+.+.|-. ..+++.++| +.+++++|+.+. |.+.|||.|+++++.+| +
T Consensus 10 ~p~i~~~e~~~v~~vl~sg~i~---------~G~~v~~FE----~~~ae~~G~k~a-----va~~sgT~AL~laL~al~i 71 (374)
T COG0399 10 RPSIGEEELAAVQEVLKSGWLT---------GGPFVRRFE----QAFAEYLGVKYA-----VAVSSGTAALHLALLALAI 71 (374)
T ss_pred CCCcchHHHHHHHHHHHcCCee---------cChHHHHHH----HHHHHHhCCCeE-----EEecChHHHHHHHHHhcCC
Confidence 3346677788888888776622 125688888 678999999983 56699999999999977 7
Q ss_pred CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHH
Q 009673 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYP 269 (529)
Q Consensus 190 ~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~ 269 (529)
+|||+|++++.++.+.. +.+...|+ +++.+++|++++.+|++.||+.|++ +||+|+.. .-++...|++
T Consensus 72 g~GDeVI~ps~TfvATa--------n~i~~~Ga--~PVFvDid~~T~nid~~~ie~aIt~-~tKAIipV-hl~G~~~dm~ 139 (374)
T COG0399 72 GPGDEVIVPSFTFVATA--------NAVLLVGA--KPVFVDIDPDTLNIDPDLIEAAITP-RTKAIIPV-HLAGQPCDMD 139 (374)
T ss_pred CCCCEEEecCCchHHHH--------HHHHHcCC--eEEEEecCCcccCCCHHHHHHHccc-CCeEEEEe-hhccCCCCHH
Confidence 99999999998764432 34556676 9999999999999999999999999 89999874 4455678999
Q ss_pred HHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccc--ccccCCCCeEEEeeCCCcchhHHHhhhcccccCC
Q 009673 270 RMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG 347 (529)
Q Consensus 270 ~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~ 347 (529)
+|.+||++||++||.|+||+.|..+.|..... ..|+.++||| |.++...||+++++++ ++.++++.....|
T Consensus 140 ~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt--~Gd~~~fSF~~~K~ittgEGGav~tnd~-----ela~k~~~lr~hG 212 (374)
T COG0399 140 AIMALAKRHGLPVIEDAAQAHGATYKGKKVGS--FGDIGAFSFHATKNLTTGEGGAVVTNDE-----ELAEKARSLRNHG 212 (374)
T ss_pred HHHHHHHHcCCeEEEEcchhccCeecCccccc--ccceEEEEecCCCCccccCceEEEeCCH-----HHHHHHHHHHHhC
Confidence 99999999999999999999999887654332 3577777777 9896669999999996 7777765433333
Q ss_pred CCC-----------C--ChHH-HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecC--C--CCCceEE
Q 009673 348 LQG-----------G--PHNH-TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG--G--SDNHLVL 408 (529)
Q Consensus 348 ~~g-----------~--p~~~-~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~--g--t~~~~~~ 408 (529)
... | ..+. ..||+. +.++ +.+++..++..++++.+.+.|++. ++.+... + ...|++.
T Consensus 213 ~~~~~~~~y~~~~~G~N~rm~~iqAAig--l~QL--~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~ 288 (374)
T COG0399 213 LSRDAVFKYLHEELGYNYRLTEIQAAIG--LAQL--ERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYT 288 (374)
T ss_pred cCCCccccceeeecccccCHHHHHHHHH--HHHH--HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeE
Confidence 211 1 1122 223322 2232 334566777777888888888874 3444332 2 1234445
Q ss_pred EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCC--------------C----CCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673 409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKS--------------A----LVPGGIRIGSPAMTTRGFSEKEFVAIA 470 (529)
Q Consensus 409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~--------------~----~~~~~iRig~~~~tt~g~~~~d~~~la 470 (529)
+-+...+++.+.+.+.|++.||.......|-+.. | .....+++.+ . -+++++|+++++
T Consensus 289 i~~~~~~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~--~--p~l~~~~~~~V~ 364 (374)
T COG0399 289 ILVDEEGISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPL--H--PNLSEEDVDRVI 364 (374)
T ss_pred EEecCCCCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccC--C--CCCCHHHHHHHH
Confidence 5454445677889999999987743333342211 0 0112355432 2 258899999999
Q ss_pred HHHHHHHH
Q 009673 471 DFIHEGVE 478 (529)
Q Consensus 471 ~~i~~~~~ 478 (529)
+.|.+++.
T Consensus 365 ~~l~~~~~ 372 (374)
T COG0399 365 EALKEVLG 372 (374)
T ss_pred HHHHHHhc
Confidence 99998875
No 61
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.94 E-value=6.8e-24 Score=222.75 Aligned_cols=334 Identities=19% Similarity=0.201 Sum_probs=220.5
Q ss_pred cceeEecCC--CC-CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 009673 103 KSLELIASE--NF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (529)
Q Consensus 103 ~~i~L~ase--n~-~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~ 179 (529)
+.|+|..++ .+ +++.+++++...+.. +..++++.++..|.. ++.+..++++++++|.+. +|.+++|++
T Consensus 43 ~~i~l~~~~~~~~~~~~~i~~a~~~~~~~-~~~~~~~~~~~~G~~---~l~~~l~~~la~~~g~~~-----~i~~tsG~~ 113 (397)
T PRK06939 43 EVINFCANNYLGLANHPELIAAAKAALDS-HGFGMASVRFICGTQ---DLHKELEEKLAKFLGTED-----AILYSSCFD 113 (397)
T ss_pred eEEEeeccCccccCCCHHHHHHHHHHHHH-cCCCCcccccccCCc---HHHHHHHHHHHHHhCCCc-----EEEEcChHH
Confidence 457776554 22 688899998877643 333455545444542 233344588899999762 466799999
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---c--CCcE
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---F--RPKL 254 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---~--~pkl 254 (529)
++..++.++++|||+|++.+|.|.++.. .+...+. +++.++ .+|++++++.+++ . ++++
T Consensus 114 a~~~~~~~l~~~gd~vi~~~~~~~~~~~--------~~~~~~~--~~~~~~------~~d~~~l~~~i~~~~~~~~~~~~ 177 (397)
T PRK06939 114 ANGGLFETLLGKEDAIISDALNHASIID--------GVRLCKA--KRYRYA------NNDMADLEAQLKEAKEAGARHKL 177 (397)
T ss_pred HHHHHHHHhCCCCCEEEEEhhhhHHHHH--------HHHhcCC--ceEEeC------CCCHHHHHHHHHhhhccCCCCeE
Confidence 9999999999999999999988765421 2233443 344433 2588999888864 2 5677
Q ss_pred EEEcCCC--CCCCCCHHHHHHHHHHhCCEEEEecccccccccc-cc--cC-CCC-CcccEEEecccccccCCCCeEEEee
Q 009673 255 IIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV--VA-DPF-KYCDVVTTTTHKSLRGPRGGMIFFK 327 (529)
Q Consensus 255 Ii~~~s~--~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~~--~~-~~~-~~aDiv~~S~hK~l~GprgG~i~~~ 327 (529)
|+.+... .+...++++|.++|++||++||+|++|..|.... +. .. ..+ +..|++++|+||+++|+|+||++++
T Consensus 178 v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~ 257 (397)
T PRK06939 178 IATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGR 257 (397)
T ss_pred EEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeC
Confidence 7776433 3336789999999999999999999986664322 11 00 011 2468999999999988999999998
Q ss_pred CCCcchhHHHhhhcccccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673 328 KDPVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 406 (529)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~ 406 (529)
+ ++.+.+.....+.. .+++.....+++..+++.+. ..++..+++.++++.+.+.|++.|+++..+ ...+
T Consensus 258 ~------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~ 327 (397)
T PRK06939 258 K------EVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAAGFTLGPG--EHPI 327 (397)
T ss_pred H------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCcCCC--CCCE
Confidence 7 67666654322222 23333334444445666543 235677888999999999999888776543 2233
Q ss_pred EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 407 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 407 ~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+.+.+. .+.+..++.+.|.+.||.+.....|. .+....+||++++.. .+++|++++++.|+++++
T Consensus 328 ~~~~~~-~~~~~~~~~~~L~~~gI~v~~~~~~~--~~~~~~~iRi~~~~~----~~~~~i~~~l~~L~~~~~ 392 (397)
T PRK06939 328 IPVMLG-DAKLAQEFADRLLEEGVYVIGFSFPV--VPKGQARIRTQMSAA----HTKEQLDRAIDAFEKVGK 392 (397)
T ss_pred EEEEEC-CHHHHHHHHHHHHHCCceEeeeCCCC--CCCCCceEEEEECCC----CCHHHHHHHHHHHHHHHH
Confidence 333332 22345667777777799986432221 111246799987654 358999999999988775
No 62
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.3e-23 Score=220.87 Aligned_cols=319 Identities=15% Similarity=0.151 Sum_probs=207.5
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.++|..++.. +|+.+++++...+.+....+|+. .....++++...+++.+.+|.+.+.- -+|.+++|+ +
T Consensus 36 ~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~~~~~~~~-~~i~vt~G~~~ 108 (394)
T PRK05942 36 DLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPP------FEGTASFRQAITDWYHRRYGVELDPD-SEALPLLGSKE 108 (394)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCC------CCCCHHHHHHHHHHHHHHHCCCcCCC-CeEEEccChHH
Confidence 45777655432 45667887766554221123332 22234666666678887778643210 136668887 9
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
|+..++.++++|||+|++++|.|+++.. .+...|. ++++++++.+ ++.+|++++++.+.+ ++|+|+++
T Consensus 109 al~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~ 177 (394)
T PRK05942 109 GLTHLALAYVNPGDVVLVPSPAYPAHFR--------GPLIAGA--QIYPIILKPENDWLIDLSSIPEEVAQ-QAKILYFN 177 (394)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCC--EEEEeecCCccCCccCHHHHHHhccc-cceEEEEc
Confidence 9999999999999999999998876532 1233454 6667777644 467999999998876 89999999
Q ss_pred CCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC---CC---cccEEEecccccc--cCCCCeEEE
Q 009673 259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTHKSL--RGPRGGMIF 325 (529)
Q Consensus 259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~---~aDiv~~S~hK~l--~GprgG~i~ 325 (529)
+|+||+ ..+ +++|.++|+++|+++|+|+++. .+.+.+....+ +. ...+++.|++|.+ +|.|.||++
T Consensus 178 ~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~ 256 (394)
T PRK05942 178 YPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYA-ELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVV 256 (394)
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccch-hhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeee
Confidence 899997 444 7888899999999999999854 33332221111 11 2347789999976 788999999
Q ss_pred eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 405 (529)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~ 405 (529)
+++ ++.+.+.........+.+...+. ++..+++.. ....++.++++.++++.+.+.|.+.|+.+..+ ..+.
T Consensus 257 ~~~------~l~~~l~~~~~~~~~~~~~~~q~-~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~-~~~~ 327 (394)
T PRK05942 257 GNR------HIIQGLRTLKTNLDYGIFSALQK-AAETALQLP-DSYLQQVQERYRTRRDFLIQGLGELGWNIPPT-KATM 327 (394)
T ss_pred cCH------HHHHHHHHHHhhcccCCCHHHHH-HHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-Ceee
Confidence 987 67776654322111122223233 333445421 22336667778888889999998888876654 2345
Q ss_pred eEEEccCCCCCcHHHH-HHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccC
Q 009673 406 LVLVDLRPMGIDGARV-EKILDMASITLNKNSVPGDK-SALVPGGIRIGSP 454 (529)
Q Consensus 406 ~~~v~~~~~~i~~~~~-~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~ 454 (529)
++|+++.. +++..++ .++|+++||.+. ||+. +...+++|||++.
T Consensus 328 f~~~~~~~-~~~~~~~~~~~l~~~gV~v~----~g~~f~~~~~~~iRis~~ 373 (394)
T PRK05942 328 YLWVPCPV-GMGSTDFALNVLQKTGVVVT----PGNAFGEGGEGYVRISLI 373 (394)
T ss_pred EEEEECCC-CCCHHHHHHHHHHHCCEEEe----CChhhCcCCCCeEEEEec
Confidence 67777753 4455554 456788999994 4443 1223579999973
No 63
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.93 E-value=1.3e-23 Score=217.12 Aligned_cols=326 Identities=16% Similarity=0.141 Sum_probs=220.3
Q ss_pred EecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH
Q 009673 107 LIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (529)
Q Consensus 107 L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~ 186 (529)
++++...+++.|++++..... .+. ..+.+.++ .+++.+++++|++++.. ..+.+.+|++++..++.
T Consensus 3 ~~p~p~~~~~~~~~~~~~~~~-~~~-----------~~~~~~~~-~~~~~la~~~~~~~~~~-~i~~~~~gt~~l~~~~~ 68 (355)
T TIGR03301 3 LTPGPLSTSATVRDAMLVDWC-HWD-----------SEFNDVTD-QVRDRLLALAGGDDNHT-CVLLQGSGTFAVEATIG 68 (355)
T ss_pred CcCCCCCCCHHHHHHhhhhcc-CCC-----------HHHHHHHH-HHHHHHHHHhcCCCCCc-EEEEeCCcHHHHHHHHH
Confidence 567777889999999986331 111 12333333 45689999999986432 11235678899999999
Q ss_pred hhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-CCcEEEEcCCCCCC-
Q 009673 187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASAYPR- 264 (529)
Q Consensus 187 all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-~pklIi~~~s~~p~- 264 (529)
+++++||++++.++.+-+. .+. ......|. +++.++++ +++.+|++++++.+++. +++++++.++++++
T Consensus 69 ~~~~~~~~vi~~~~~~~~~---~~~---~~a~~~g~--~~~~i~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G 139 (355)
T TIGR03301 69 SLVPRDGKLLVLINGAYGE---RLA---KICEYLGI--PHTDLNFS-EYEPPDLNRIEEALAADPDITHVATVHHETTTG 139 (355)
T ss_pred hccCCCCeEEEECCCchhh---HHH---HHHHHcCC--ceEEEecC-CCCCCCHHHHHHHHHhCCCceEEEEEecCCccc
Confidence 9999999888766543211 010 11223444 45555554 35789999999998762 34566655555543
Q ss_pred -CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673 265 -DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 340 (529)
Q Consensus 265 -~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i 340 (529)
..|+++|.++|++||+++++|++|+.|.... .+. ++|++++|+|||+.|+.| |++++++ ++.+.+
T Consensus 140 ~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~-----~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~------~~~~~~ 208 (355)
T TIGR03301 140 ILNPLEAIAKVARSHGAVLIVDAMSSFGAIPI-----DIEELDVDALIASANKCLEGVPGFGFVIARR------DLLEAS 208 (355)
T ss_pred chhHHHHHHHHHHHcCCEEEEEeccccCCccc-----chhhcCccEEEecCCcccccCCceeEEEECH------HHHHHh
Confidence 7799999999999999999999887764321 222 589999999999988777 9999988 444443
Q ss_pred ccccc----------------CCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhcCcEEecCC-C
Q 009673 341 NNAVF----------------PGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGG-S 402 (529)
Q Consensus 341 ~~~~~----------------p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~G~~v~~~g-t 402 (529)
..... .....+++...+.++..+++.+...+ +++..+++.++++.+.+.|++.|++++.+. .
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~ 288 (355)
T TIGR03301 209 AGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERW 288 (355)
T ss_pred hCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCC
Confidence 31100 01123566677777777887765555 677888899999999999998898866432 2
Q ss_pred CCc-eEEEccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 403 DNH-LVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 403 ~~~-~~~v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
.+. ++++.+... ..+.+++.+.|.+.||.+..+ .. ...++|||++...+ +++|++++++.|+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~----~~--~~~~~iRis~~~~~----~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 289 QSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPG----KL--TLADTFRIGTIGEI----DAADIERLLEAIKDA 354 (355)
T ss_pred CCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECC----cc--ccccEEEEecCCCC----CHHHHHHHHHHHHhh
Confidence 233 334554321 235567889999999999543 21 11368999975443 489999999999865
No 64
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.93 E-value=3.6e-24 Score=221.65 Aligned_cols=300 Identities=19% Similarity=0.236 Sum_probs=211.7
Q ss_pred cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHH
Q 009673 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG-GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYT 186 (529)
Q Consensus 109 asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~-g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~ 186 (529)
++..++|+.|++++...+.+.+ +.|+.+.+. +....+.++ .+++++++++|++++ +|.+++|+ +++..++.
T Consensus 5 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~----~v~~~~g~t~a~~~~l~ 77 (353)
T TIGR03235 5 NATTPIDPAVAEAMLPWLLEEF--GNPSSRTHEFGHNAKKAVE-RARKQVAEALGADTE----EVIFTSGATESNNLAIL 77 (353)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCCchhhHHHHHHHHHHH-HHHHHHHHHhCCCCC----eEEEeCCHHHHHHHHHH
Confidence 3456789999999988875544 355543221 223333344 567899999999875 34456664 88888888
Q ss_pred hhc----CCC-CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673 187 AIL----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (529)
Q Consensus 187 all----~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (529)
++. ++| |.|++...+|+++..... .....|. +++.++++ +++.+|++++++.+++ ++++|++++++
T Consensus 78 ~l~~~~~~~g~~~vi~~~~~~~s~~~~~~-----~~~~~G~--~v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~ 148 (353)
T TIGR03235 78 GLARAGEQKGKKHIITSAIEHPAVLEPIR-----ALERNGF--TVTYLPVD-ESGRIDVDELADAIRP-DTLLVSIMHVN 148 (353)
T ss_pred HHHHhcccCCCCeeeEcccccHHHHHHHH-----HHHhcCC--EEEEEccC-CCCcCCHHHHHHhCCC-CCEEEEEEccc
Confidence 875 366 788888877765432211 1122343 66666666 4578999999999976 78999988777
Q ss_pred CCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHh
Q 009673 262 YPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (529)
Q Consensus 262 ~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~ 338 (529)
|++ ..|+++|.++|+++|+++++|++|+.|.+..+.... ++|++++|+||++ ||.| |+++++++ ...
T Consensus 149 n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~---~~D~~~~s~~K~~-gp~g~g~l~~~~~------~~~ 218 (353)
T TIGR03235 149 NETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSAD---RIDLISCSGHKIY-GPKGIGALVIRKR------GKP 218 (353)
T ss_pred CCceeccCHHHHHHHHHHcCCEEEEEchhhcCCcccccccc---CCCEEEeehhhcC-CCCceEEEEEccC------ccc
Confidence 775 789999999999999999999999988765443221 5899999999985 8887 99999874 211
Q ss_pred --hhccccc------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEc
Q 009673 339 --AINNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD 410 (529)
Q Consensus 339 --~i~~~~~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~ 410 (529)
.+....+ ....|+++...++++..+++.+. .+.++..+++.++++.+.+.|++.|++++.+.......++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~ 297 (353)
T TIGR03235 219 KAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIAR-RNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILN 297 (353)
T ss_pred ccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEE
Confidence 1111111 12257888899999999998764 46677888999999999999988999987532212222333
Q ss_pred cCCCCCcHHHHHHhHhcCCeEEcCCC
Q 009673 411 LRPMGIDGARVEKILDMASITLNKNS 436 (529)
Q Consensus 411 ~~~~~i~~~~~~~~L~~~GI~v~~~~ 436 (529)
+...+++.+++...|++ +|.+..+.
T Consensus 298 ~~~~~~~~~~v~~~L~~-~i~v~~g~ 322 (353)
T TIGR03235 298 FSIDGVNSEALIVNLRA-DAAVSTGS 322 (353)
T ss_pred EEeCCcCHHHHHHHHhC-CeEEEchh
Confidence 43346778889999976 89986553
No 65
>PRK07683 aminotransferase A; Validated
Probab=99.93 E-value=1.8e-23 Score=219.07 Aligned_cols=336 Identities=13% Similarity=0.135 Sum_probs=221.0
Q ss_pred cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
..++|..+++ +.++.+.+++...+.+.+ .+|+. .....++++...+++.+.+|+..+. ..+|.+++|+ +
T Consensus 29 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~l~~~~g~~~~~-~~~I~~t~G~~~ 100 (387)
T PRK07683 29 NLISLTIGQPDFPTPSHVKEAAKRAITENY-TSYTH------NAGLLELRKAACNFVKDKYDLHYSP-ESEIIVTIGASE 100 (387)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHHhCCCCCC-CCcEEEeCChHH
Confidence 5588877664 346788899887775432 12322 1223466666667777666764221 0145667776 9
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
|+..++.+++++||+|++++|.+.++. ..+...|. ++++++++.+++.+|.+++++.+++ ++++|++++
T Consensus 101 al~~~~~~l~~~gd~Vl~~~p~y~~~~--------~~~~~~g~--~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~i~i~~ 169 (387)
T PRK07683 101 AIDIAFRTILEPGTEVILPAPIYPGYE--------PIIRLCGA--KPVFIDTRSTGFRLTAEALENAITE-KTRCVVLPY 169 (387)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCccchH--------HHHHHcCC--EEEEeecCcccCCCCHHHHHHhcCc-CceEEEEeC
Confidence 999999999999999999998765432 12334554 6777777756678899999999877 899999999
Q ss_pred CCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC-C-----cccEEEecccccc--cCCCCeEEEe
Q 009673 260 SAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-----YCDVVTTTTHKSL--RGPRGGMIFF 326 (529)
Q Consensus 260 s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~-----~aDiv~~S~hK~l--~GprgG~i~~ 326 (529)
++||+ .. ++++|.++|+++|+++|+|+++. .+.+.+.. .++ . .-.+++.|++|.+ +|.|.||+++
T Consensus 170 p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~-~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~ 247 (387)
T PRK07683 170 PSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYS-ELVYEQPH-TSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFA 247 (387)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccc-cceeCCCc-CChhhccCCcCCeEEEeeccccccCccceeEEEEc
Confidence 99987 33 48889999999999999999854 33333211 121 1 1248889999987 7889999999
Q ss_pred eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 406 (529)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~ 406 (529)
++ ++.+++.........+.+...+.++ ...+..- ....+..++++.++++.+.+.|.+.|+.+..+ ..+++
T Consensus 248 ~~------~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~ 318 (387)
T PRK07683 248 PS------YLAKHILKVHQYNVTCASSISQYAA-LEALTAG-KDDAKMMRHQYKKRRDYVYNRLISMGLDVEKP-TGAFY 318 (387)
T ss_pred CH------HHHHHHHHHHHhccCCCChHHHHHH-HHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC-CeeEE
Confidence 87 6666654322111112222322222 2234321 12235566777888999999998888776544 23455
Q ss_pred EEEccCCCCCcHHHH-HHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 407 VLVDLRPMGIDGARV-EKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 407 ~~v~~~~~~i~~~~~-~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.|+.+...+++..++ ..+|+++||.+. ||.. +...++++||++. .+++++++..++|.+++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~ll~~~gI~v~----pg~~f~~~~~~~~Ri~~~------~~~~~~~~al~~l~~~l~ 382 (387)
T PRK07683 319 LFPSIGHFTMSSFDFALDLVEEAGLAVV----PGSAFSEYGEGYVRLSYA------YSIETLKEGLDRLEAFLQ 382 (387)
T ss_pred EEEecccCCCCHHHHHHHHHHhCCEEEc----CchhhCCCCCCeEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 566665434555454 456788999994 4433 2234679999874 347888888888887765
No 66
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.93 E-value=3e-23 Score=217.73 Aligned_cols=338 Identities=17% Similarity=0.174 Sum_probs=220.7
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
..|+|..+++. +++.+.+++...+...+. .|+ .....+++++.+.+++...+|+..+.. .+|.+++|+ +
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~-~~i~it~G~~~ 102 (391)
T PRK07309 31 GILKLTLGEPDFTTPDHVKEAAKRAIDANQS-HYT------GMAGLLELRQAAADFVKEKYNLDYAPE-NEILVTIGATE 102 (391)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-CCC------CCCCcHHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChHH
Confidence 56777766653 467788888866643221 222 222245677777788877777743211 246667876 9
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEE
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIA 257 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~ 257 (529)
|+.+++.++++|||+|++.+|.|+++.. .....|. +++.++.+++++.+|++++++.++.. ++++|++
T Consensus 103 al~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l 172 (391)
T PRK07309 103 ALSASLTAILEPGDKVLLPAPAYPGYEP--------IVNLVGA--EIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVIL 172 (391)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCC--EEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEE
Confidence 9999999999999999999998766421 2334554 56666666445789999999988642 5789999
Q ss_pred cCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC-C---cccEEEecccccc--cCCCCeEEEe
Q 009673 258 GASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K---YCDVVTTTTHKSL--RGPRGGMIFF 326 (529)
Q Consensus 258 ~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~---~aDiv~~S~hK~l--~GprgG~i~~ 326 (529)
++|+||+ .. ++++|.++|++||+++|+|+++ ..+.+.+....++ . .-.+++.|+||.+ +|.|.||+++
T Consensus 173 ~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~ 251 (391)
T PRK07309 173 NYPANPTGVTYSREQIKALADVLKKYDIFVISDEVY-SELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFA 251 (391)
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccc-cceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEe
Confidence 8888887 33 4889999999999999999984 4444432211121 1 1227889999986 7899999999
Q ss_pred eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 406 (529)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~ 406 (529)
++ ++.+++.... +....+++.....++..+++.. ........+++.++++.+.+.|++.|+.+..+. .+.+
T Consensus 252 ~~------~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~-gg~~ 322 (391)
T PRK07309 252 PA------EFTAQLIKSH-QYLVTAATTMAQFAAVEALTNG-KDDALPMKKEYIKRRDYIIEKMTDLGFKIIKPD-GAFY 322 (391)
T ss_pred CH------HHHHHHHHHH-hhcccCCChHHHHHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHHHHCCCeecCCC-eeEE
Confidence 87 6766665432 1111122222233333344321 112245567778888899999988888776542 2455
Q ss_pred EEEccCCC-CCcHHHHH-HhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 407 VLVDLRPM-GIDGARVE-KILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 407 ~~v~~~~~-~i~~~~~~-~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+|+.+... ..+..++. ++++++||.+. ||.. ++..+++|||++.. .++++++..+.|++++.
T Consensus 323 ~~~~l~~~~~~~~~~~~~~l~~~~gv~v~----pg~~f~~~~~~~iRi~~~~------~~~~l~~~i~~l~~~~~ 387 (391)
T PRK07309 323 IFAKIPAGYNQDSFKFLQDFARKKAVAFI----PGAAFGPYGEGYVRLSYAA------SMETIKEAMKRLKEYME 387 (391)
T ss_pred EEEECCCCCCCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCEEEEEecC------CHHHHHHHHHHHHHHHH
Confidence 66666431 12445555 55678999994 5543 23346799998652 36788888888877664
No 67
>PRK08912 hypothetical protein; Provisional
Probab=99.93 E-value=2e-23 Score=218.80 Aligned_cols=359 Identities=15% Similarity=0.127 Sum_probs=228.2
Q ss_pred cccCChHHHHHHHHHHHHhhcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673 83 LGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (529)
Q Consensus 83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~ 160 (529)
+....+..+..+.+... ....++|..+.. ..|+.+.+++...+.+.. .+|+. .....++++...+++.+.
T Consensus 8 ~~~~~~~~~~~~~~~~~-~~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~ia~~~~~~ 79 (387)
T PRK08912 8 FADLPTTIFEVMSQLAR-EHGAINLGQGFPDDPGPEDVRRAAADALLDGS-NQYPP------MMGLPELRQAVAAHYARF 79 (387)
T ss_pred HhhCCCCHHHHHHHHHh-hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCcHHHHHHHHHHHHHH
Confidence 43444444443433222 134577765543 346778888766554322 22332 122346666666788877
Q ss_pred cCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCC
Q 009673 161 FNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD 239 (529)
Q Consensus 161 ~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD 239 (529)
+|.+.+.. .+|.+++|+ +|+..++.++++|||+|++++|.|.++.. .+...|. +++.++++++++.+|
T Consensus 80 ~g~~~~~~-~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~ 148 (387)
T PRK08912 80 QGLDLDPE-TEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLP--------LIRRAGG--VPRLVRLEPPHWRLP 148 (387)
T ss_pred hCCCCCCc-ccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEEecCcccCcCC
Confidence 78653321 256667776 89988999999999999999998764421 2334554 666666765568899
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC---C---CcccEE
Q 009673 240 YDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---F---KYCDVV 308 (529)
Q Consensus 240 ~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~---~~aDiv 308 (529)
++++++.+.. ++|+|++++++||+ ..+ +++|.++|++||+++|+|+++. .+.+.+....+ + ...+++
T Consensus 149 ~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~ 226 (387)
T PRK08912 149 RAALAAAFSP-RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWE-HVVFDGRRHIPLMTLPGMRERTVK 226 (387)
T ss_pred HHHHHHHhCc-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhh-hcccCCCCCcChhhCCCccCceEE
Confidence 9999999877 88999999999997 444 7778999999999999999854 33333211111 1 124589
Q ss_pred Eecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673 309 TTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 386 (529)
Q Consensus 309 ~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l 386 (529)
++|+||.+ +|.|.||+++++ ++.+.+.........+.+...+. ++..++.. ....+++..+++.++++.+
T Consensus 227 ~~S~SK~~g~~GlRiG~~~~~~------~~~~~l~~~~~~~~~~~~~~~q~-~~~~~l~~-~~~~~~~~~~~~~~~~~~l 298 (387)
T PRK08912 227 IGSAGKIFSLTGWKVGFVCAAP------PLLRVLAKAHQFLTFTTPPNLQA-AVAYGLGK-PDDYFEGMRADLARSRDRL 298 (387)
T ss_pred EeechhhccCcCceeEEEecCH------HHHHHHHHHHhhccccCChHHHH-HHHHHHhC-CHHHHHHHHHHHHHHHHHH
Confidence 99999986 788899999987 66666544322211222222222 22334431 1122366778888999999
Q ss_pred HHHHHhcCcEEecCCCCCceEEEccCCCC--CcHHHHHHh-HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCH
Q 009673 387 ASRLVELGYKLVSGGSDNHLVLVDLRPMG--IDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE 463 (529)
Q Consensus 387 ~~~L~~~G~~v~~~gt~~~~~~v~~~~~~--i~~~~~~~~-L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~ 463 (529)
.+.|++.|+.+..+ ..++++|+++...+ .+..++.+. ++++||.+..+...+.. ...++++||++.. .+
T Consensus 299 ~~~L~~~g~~~~~~-~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~-~~~~~~iRl~~~~------~~ 370 (387)
T PRK08912 299 AAGLRRIGFPVLPS-QGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEE-DPVTSVVRFCFAK------RD 370 (387)
T ss_pred HHHHHhCCCcccCC-CcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCC-CCCCCEEEEEEeC------CH
Confidence 99999988876654 23566777875422 355555555 57899999543211111 1135789999752 36
Q ss_pred HHHHHHHHHHHHHHH
Q 009673 464 KEFVAIADFIHEGVE 478 (529)
Q Consensus 464 ~d~~~la~~i~~~~~ 478 (529)
+++++..+.|.++++
T Consensus 371 ~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 371 ATLDEAVERLAAARR 385 (387)
T ss_pred HHHHHHHHHHHHHHh
Confidence 888888888877654
No 68
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.93 E-value=7.8e-24 Score=223.29 Aligned_cols=338 Identities=15% Similarity=0.084 Sum_probs=219.9
Q ss_pred cceeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 009673 103 KSLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (529)
Q Consensus 103 ~~i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~ 181 (529)
+.+.|. .+-.++|+.|.+++..++. .|..+..+.++.+...+....+ .. +.+ +++|++++++ +...++|+++
T Consensus 27 ~~iyld~~a~g~~p~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~-~~~-~l~g~~~~~v---~~~~~~t~~l 99 (406)
T TIGR01814 27 AVIYLDGNSLGLMPKAARNALKEELD-KWAKIAIRGHNTGKAPWFTLDE-SL-LKL-RLVGAKEDEV---VVMNTLTINL 99 (406)
T ss_pred CcEEecCCCcCcCcHHHHHHHHHHHH-HHHHhhhccCccCCCChhhhhh-hh-ccc-cccCCCCCcE---EEeCCchHHH
Confidence 457776 4555779999999987664 3322211112221122222222 22 334 8999987642 3334455888
Q ss_pred HHHHHhhcCCCC---EEEEcCCCCCccccccccccccccccccceEE--EEEcccCCCCCCCCHHHHHHHhhh--cCCcE
Q 009673 182 FEVYTAILKPHD---RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE--SMPYRLDESTGLVDYDMLEKTAIL--FRPKL 254 (529)
Q Consensus 182 ~~~l~all~pGD---~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~--~v~~~v~~~~~~iD~d~le~~i~~--~~pkl 254 (529)
..++.++++||+ .|++.+.+|++.+.... ......|..+. .+.++.+ +++.+|++++++.++. .++++
T Consensus 100 ~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~----~~~~~~g~~~~~~~~~~~~~-~~g~~~~~~l~~~~~~~~~~t~l 174 (406)
T TIGR01814 100 HLLLASFYKPTPKRYKILLEAKAFPSDHYAIE----SQLQLHGLTVEESMVQIEPR-EEETLRLEDILDTIEKNGDDIAV 174 (406)
T ss_pred HHHHHHhcCCcCCccEEEecCCCCChHHHHHH----HHHHhcCCCcccceEEeccC-CCCccCHHHHHHHHHhcCCCeEE
Confidence 888888877753 57766677765321110 01122343221 1333333 3478899999888752 27888
Q ss_pred EEEcCCCCC--CCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeEEEeeCCCcc
Q 009673 255 IIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVL 332 (529)
Q Consensus 255 Ii~~~s~~p--~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~ 332 (529)
|++.+.++. ...|+++|.++|+++|+++++|++|+.|.+..++... ++|++++|+||||.||.||.+++.++
T Consensus 175 v~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~---gvD~~~~s~hK~l~g~pG~~l~v~~~--- 248 (406)
T TIGR01814 175 ILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDW---GVDFACWCTYKYLNAGPGAGAFVHEK--- 248 (406)
T ss_pred EEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccC---CCCEEEEcCccccCCCCCeEEEEehh---
Confidence 888765544 3889999999999999999999999999875543222 68999999999997666766666553
Q ss_pred hhHHHhhhccc----------------------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673 333 GVELESAINNA----------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (529)
Q Consensus 333 ~~~l~~~i~~~----------------------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L 390 (529)
.+. .+... ......|+|+...++++..+++.+...+.+...++....++++.+.|
T Consensus 249 --~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l 325 (406)
T TIGR01814 249 --HAH-TERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELI 325 (406)
T ss_pred --hhh-hcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 111 11000 00012478999999999999998876777888888888899999988
Q ss_pred Hhc-----CcEEecCCC---CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc-CCCccCCC
Q 009673 391 VEL-----GYKLVSGGS---DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS-PAMTTRGF 461 (529)
Q Consensus 391 ~~~-----G~~v~~~gt---~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~-~~~tt~g~ 461 (529)
.+. |++++.+.. ...++.+.+. ++++++.+.|.++||.+... .++.||||. +.+||
T Consensus 326 ~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~---~~~~~~~~~L~~~gi~v~~~---------~~~~iRiS~~~~~nt--- 390 (406)
T TIGR01814 326 KARCGGPPVLTIITPRDHAQRGCQLSLTHP---VPGKAVFQALIKRGVIGDKR---------EPSVIRVAPVPLYNT--- 390 (406)
T ss_pred HhhcCCCCceEEeCCCChhhcCCeEEEEec---CCHHHHHHHHHHCCEEEecc---------CCCeEEEechhccCC---
Confidence 773 477776421 1223334432 35778888898999988421 246899998 55654
Q ss_pred CHHHHHHHHHHHHHHH
Q 009673 462 SEKEFVAIADFIHEGV 477 (529)
Q Consensus 462 ~~~d~~~la~~i~~~~ 477 (529)
++|++++++.|++++
T Consensus 391 -~~did~l~~~l~~~~ 405 (406)
T TIGR01814 391 -FVDVYDAVNVLEEIL 405 (406)
T ss_pred -HHHHHHHHHHHHHHh
Confidence 899999999998754
No 69
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.93 E-value=1.3e-23 Score=222.77 Aligned_cols=345 Identities=14% Similarity=0.086 Sum_probs=221.9
Q ss_pred cceeEecCCC------CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC
Q 009673 103 KSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS 176 (529)
Q Consensus 103 ~~i~L~asen------~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s 176 (529)
+.|+|..++. .+++.+.+++...+......+|+. .....++++.+.+++.+.+|.+.+. -+|.+|+
T Consensus 53 ~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~~~~~~~--~~v~it~ 124 (430)
T PLN00145 53 PVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYST------CVGLLPARRAIAEYLSRDLPYELST--DDIYLTA 124 (430)
T ss_pred CeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCC------CccCHHHHHHHHHHHhhccCCCCCh--hhEEEeC
Confidence 5678876654 357899999988775432223432 1223456655556666655554322 2566788
Q ss_pred hH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcE
Q 009673 177 GS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKL 254 (529)
Q Consensus 177 Gs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pkl 254 (529)
|+ +|+..++.++++|||+|++++|.|..+.. ...+.|. +++.+++.++ ++.+|++++++++++ ++++
T Consensus 125 G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~ 193 (430)
T PLN00145 125 GCAQAIEIIMSVLAQPGANILLPRPGYPLYEA--------RAVFSGL--EVRHFDLLPERGWEVDLEGVEALADE-NTVA 193 (430)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCC--EEEEeeCCcccCCcCCHHHHHHHhCc-CceE
Confidence 86 99999999999999999999997754321 2234454 5566665433 578999999999887 8899
Q ss_pred EEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---Cc--ccEEEeccccc--ccCCCCe
Q 009673 255 IIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY--CDVVTTTTHKS--LRGPRGG 322 (529)
Q Consensus 255 Ii~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~~--aDiv~~S~hK~--l~GprgG 322 (529)
|++++|+||+ ..+ +++|.++|+++|++||+|++ |..+++.+....++ .. .-++++|++|. ++|+|.|
T Consensus 194 i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~-Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG 272 (430)
T PLN00145 194 MVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEV-YDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLG 272 (430)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEecc-chhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEE
Confidence 9999999997 454 77888999999999999998 45555433211122 11 22788999998 4899999
Q ss_pred EEEeeCCCcch--hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEec
Q 009673 323 MIFFKKDPVLG--VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 399 (529)
Q Consensus 323 ~i~~~~~~~~~--~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~ 399 (529)
|++.+++.... .++.+.+.... .....++....+++..+|+.-....+++.+++++++++.+.+.|++. |+.+..
T Consensus 273 ~iv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~ 350 (430)
T PLN00145 273 WIATCDPNGILKETKVVDSIRNYL--NISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPH 350 (430)
T ss_pred EEEEecchhhhhhhHHHHHHHHHh--cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 99985321000 01122333221 11112222233333334543112335778888999999999999884 776532
Q ss_pred CCCCCceEEEccCCC---CC-cH-HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673 400 GGSDNHLVLVDLRPM---GI-DG-ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 474 (529)
Q Consensus 400 ~gt~~~~~~v~~~~~---~i-~~-~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~ 474 (529)
......++|+++... ++ +. +.+.++|++.||.+ .||.... .++++||++. ..++++++..+.|.
T Consensus 351 ~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v----~pG~~fg-~~~~lRis~~------~~~~~l~~al~rl~ 419 (430)
T PLN00145 351 KPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVV----LPGSALG-MKNWLRITFA------IDPPSLEDGLERLK 419 (430)
T ss_pred CCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEE----eCccccC-CCCeEEEEeC------CCHHHHHHHHHHHH
Confidence 223456778776421 22 33 34567888999999 4554321 2589999964 24788888888888
Q ss_pred HHHHHH
Q 009673 475 EGVEIT 480 (529)
Q Consensus 475 ~~~~~~ 480 (529)
+.+...
T Consensus 420 ~~~~~~ 425 (430)
T PLN00145 420 SFCLRH 425 (430)
T ss_pred HHHHHh
Confidence 877654
No 70
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.93 E-value=1.2e-23 Score=217.55 Aligned_cols=327 Identities=20% Similarity=0.200 Sum_probs=217.6
Q ss_pred cceeEecCCC---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673 103 KSLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (529)
Q Consensus 103 ~~i~L~asen---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs 178 (529)
+.|+|..+++ ..++.+++++...+. +|..++.+.++..|. +..++++ +.+++++|.+. +|.+++|+
T Consensus 17 ~~id~~~~~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~~~~~-----~i~~~~G~ 86 (360)
T TIGR00858 17 RLLNFSSNDYLGLASHPEVIQAAQQGAE-QYGAGSTASRLVSGNSPLHEELE----EELAEWKGTEA-----ALLFSSGY 86 (360)
T ss_pred eEEecccCCcccCCCCHHHHHHHHHHHH-hcCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCC-----EEEECchH
Confidence 4577777643 245899999988773 455555443333332 3334444 77788888543 56679999
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc---CCcEE
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLI 255 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~---~pklI 255 (529)
+++..++.++++|||+|++.++.|..... .+...|. +++.++ .+|++++++.++.. ++++|
T Consensus 87 ~~~~~~l~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~~~~~~~~~~~~v 150 (360)
T TIGR00858 87 LANVGVISALVGKGDLILSDALNHASLID--------GCRLSGA--RVRRYR------HNDVEHLERLLEKNRGERRKLI 150 (360)
T ss_pred HHHHHHHHHhCCCCCEEEEEccccHHHHH--------HHHhcCC--ceEEec------CCCHHHHHHHHHHcccCCCeEE
Confidence 88888888889999999999887654421 2233443 333332 36899999988753 46778
Q ss_pred EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccccccc---C-CCC--CcccEEEecccccccCCCCeEEEee
Q 009673 256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV---A-DPF--KYCDVVTTTTHKSLRGPRGGMIFFK 327 (529)
Q Consensus 256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~---~-~~~--~~aDiv~~S~hK~l~GprgG~i~~~ 327 (529)
+++.+++++ ..|+++|.++|+++|+++|+|++|..|....... . ..+ ...+++++|+||+| |++|||++++
T Consensus 151 ~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~gG~~~~~ 229 (360)
T TIGR00858 151 VTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKAL-GSYGAYVAGS 229 (360)
T ss_pred EEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhh-hccCcEEEcC
Confidence 877665544 6799999999999999999999987664422100 0 111 14679999999998 5578999988
Q ss_pred CCCcchhHHHhhhcccccCC-CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673 328 KDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 406 (529)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~ 406 (529)
+ ++.+.+.....+. ..++++...++++..+++... ..+...+++.++++.+.+.|.+.|+.+..+ ...+
T Consensus 230 ~------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~ 299 (360)
T TIGR00858 230 Q------ALIDYLINRARTLIFSTALPPAVAAAALAALELIQ--EEPWRREKLLALIARLRAGLEALGFTLMPS--CTPI 299 (360)
T ss_pred H------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHHcCCccCCC--CCCE
Confidence 7 6666654332222 223344455555556676443 224567889999999999999888776643 2446
Q ss_pred EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673 407 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473 (529)
Q Consensus 407 ~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i 473 (529)
+++.+.. ..+..++.+.|.++||.+.....++. +..++++||+++..+ +++|++++++.|
T Consensus 300 ~~~~~~~-~~~~~~~~~~l~~~gI~v~~~~~~~~--~~~~~~iRis~~~~~----~~~~i~~~l~~l 359 (360)
T TIGR00858 300 VPVIIGD-NASALALAEELQQQGIFVGAIRPPTV--PAGTSRLRLTLSAAH----TPGDIDRLAEAL 359 (360)
T ss_pred EEEEeCC-HHHHHHHHHHHHHCCeeEeeeCCCCC--CCCCceEEEEEcCCC----CHHHHHHHHHhh
Confidence 6666542 23456788888889999964322221 112458999987654 479999998876
No 71
>PRK07550 hypothetical protein; Provisional
Probab=99.93 E-value=5.7e-23 Score=215.33 Aligned_cols=334 Identities=15% Similarity=0.078 Sum_probs=218.5
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
..++|..+++. +++.+.+++.+.+.+.....| +......++++.+.+++.+.+|..... -+|.+++|+ +
T Consensus 30 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y------~~~~G~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~~ 101 (386)
T PRK07550 30 PLIDLSQAVPGYPPPPELLRALAEAAADPAAHLY------GPVEGLPELREAYAAHYSRLYGAAISP--EQVHITSGCNQ 101 (386)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCC------CCCCCCHHHHHHHHHHHHHHhCCCCCc--ceEEEecCcHH
Confidence 45788777753 467888888776532211122 211223467766778888887865322 256678886 8
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
|+..++.++++|||+|++++|.|.++.. .+...|. ++++++++++ ++.+|++++++.+++ ++++|++.
T Consensus 102 al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~v~~~ 170 (386)
T PRK07550 102 AFWAAMVTLAGAGDEVILPLPWYFNHKM--------WLDMLGI--RPVYLPCDEGPGLLPDPAAAEALITP-RTRAIALV 170 (386)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEEecCCCcCCCCCHHHHHHHhcc-cCcEEEEe
Confidence 9999999999999999999998765421 2234454 6777777643 567899999999987 89998888
Q ss_pred CCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCC-CCC----c-ccEEEecccccc--cCCCCeEEE
Q 009673 259 ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD-PFK----Y-CDVVTTTTHKSL--RGPRGGMIF 325 (529)
Q Consensus 259 ~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~-~~~----~-aDiv~~S~hK~l--~GprgG~i~ 325 (529)
.|+||+ .. ++++|.++|+++|+++|+|+++. ++...+..+. .+. + -.+++.|++|++ +|.|.||++
T Consensus 171 ~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~ 249 (386)
T PRK07550 171 TPNNPTGVVYPPELLHELYDLARRHGIALILDETYR-DFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVV 249 (386)
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccch-hhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeee
Confidence 888887 33 37899999999999999999853 4332221111 111 1 136789999987 588999999
Q ss_pred eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCC
Q 009673 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDN 404 (529)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~ 404 (529)
+++ ++.+.+.........+.+...+. +++.++... ....++.++++.++++.+.+.|.+. ++.+... ..
T Consensus 250 ~~~------~~~~~~~~~~~~~~~~~s~~~q~-~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--g~ 319 (386)
T PRK07550 250 ASP------ARIAEIEKFMDTVAICAPRIGQI-AVAWGLPNL-ADWRAGNRAEIARRRDAFRAVFARLPGWELLAS--GA 319 (386)
T ss_pred cCH------HHHHHHHHHHhhcccCCCcHHHH-HHHHHhccH-HHHHHHHHHHHHHHHHHHHHHHHhCCCceeCCC--ce
Confidence 987 56665554332222222233222 233344321 1222455667788888899999874 6655432 34
Q ss_pred ceEEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 405 HLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 405 ~~~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
++.|+.+...+++..++... ++++||.+. ||.. +....+++||++.. ..++++++..+.|.+
T Consensus 320 ~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~----pg~~f~~~~~~~iRis~~~-----~~~~~~~~~~~~l~~ 383 (386)
T PRK07550 320 YFAYVRHPFPDRPSREVARRLAKEAGILCL----PGTMFGPGQEGYLRLAFAN-----ADVAGIGELVERLRA 383 (386)
T ss_pred EEEEecCCCCCCCHHHHHHHHHHhcCEEEe----CchhhCCCCCCEEEEEeec-----CCHHHHHHHHHHHHh
Confidence 66777775435667777665 578999995 4432 11225689999743 347899888888865
No 72
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.93 E-value=3.5e-23 Score=215.49 Aligned_cols=327 Identities=18% Similarity=0.138 Sum_probs=219.4
Q ss_pred EecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH
Q 009673 107 LIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (529)
Q Consensus 107 L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~ 186 (529)
|.....+..|.+.+++...+...+ +.+. .+.+ ..++++.+++++++++|++... .+...+|++++..++.
T Consensus 25 ~~~~~~~~~~~~~~a~~~~~~~~~--~~~~--~~~~---~~~~~~~~~~~la~~~g~~~~~---~~~~~ggt~a~~~a~~ 94 (371)
T PRK13520 25 LSSMCTEPHPIARKAHEMFLETNL--GDPG--LFPG---TAKLEEEAVEMLGELLHLPDAY---GYITSGGTEANIQAVR 94 (371)
T ss_pred eeeeecCchHHHHHHHHHHHhcCC--CCcc--cCcc---HHHHHHHHHHHHHHHhCCCCCC---eEEecCcHHHHHHHHH
Confidence 444445677888999987765432 2332 2222 2344456779999999987642 2334566799988887
Q ss_pred hhcC----CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673 187 AILK----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (529)
Q Consensus 187 all~----pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~ 262 (529)
++.+ +||+|++.++.|.++. +.+...|. +++.++.+ +++.+|+++|++.+++ ++++|++..+++
T Consensus 95 ~~~~~~~~~~~~vl~~~~~h~s~~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~vi~~~~~~ 162 (371)
T PRK13520 95 AARNLAKAEKPNIVVPESAHFSFD--------KAADMLGV--ELRRAPLD-DDYRVDVKAVEDLIDD-NTIGIVGIAGTT 162 (371)
T ss_pred HHHhhccCCCceEEecCcchHHHH--------HHHHHcCc--eEEEecCC-CCCcCCHHHHHHHHhh-CCEEEEEEcCCc
Confidence 7643 6899999887654321 12234454 45555554 4578999999999987 677666554433
Q ss_pred --CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCC--C--CCcccEEEecccccccC-CCCeEEEeeCCCcchhH
Q 009673 263 --PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--P--FKYCDVVTTTTHKSLRG-PRGGMIFFKKDPVLGVE 335 (529)
Q Consensus 263 --p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~--~~~aDiv~~S~hK~l~G-prgG~i~~~~~~~~~~~ 335 (529)
+...|+++|.++|+++|+++++|++|..+......... . ..++|.+++|+|||+.+ .++|++++.++ +
T Consensus 163 ~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~-----~ 237 (371)
T PRK13520 163 ELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDE-----S 237 (371)
T ss_pred CCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEEEcCH-----H
Confidence 34789999999999999999999998755432211111 1 12689999999998754 34576666553 4
Q ss_pred HHhhhcccccCCC--------CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673 336 LESAINNAVFPGL--------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 407 (529)
Q Consensus 336 l~~~i~~~~~p~~--------~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~ 407 (529)
+.+.+... .++. .|+++...++++..+++.+...+++++.++..++++++.+.|++.|++++.+. ..+++
T Consensus 238 ~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~v 315 (371)
T PRK13520 238 YLDALAVD-TPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGFEPVIEP-VLNIV 315 (371)
T ss_pred HHHhhccc-CccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCC-CceEE
Confidence 55554311 1211 23444445667777887766667788899999999999999998899843321 23455
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.+++. +.+++.+.|.+.||.+.... .++.+||+++..+ +++|++++++.|++++.
T Consensus 316 ~~~~~----~~~~v~~~L~~~gi~v~~~~--------~~~~iRis~~~~~----t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 316 AFDDP----NPDEVREKLRERGWRVSVTR--------CPEALRIVCMPHV----TREHIENFLEDLKEVKK 370 (371)
T ss_pred EEecC----CHHHHHHHHHHCCceeccCC--------CCCEEEEEEECCC----CHHHHHHHHHHHHHHhh
Confidence 55553 46788888888899985421 2467999976654 58999999999987654
No 73
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.93 E-value=2.4e-23 Score=215.27 Aligned_cols=329 Identities=13% Similarity=0.089 Sum_probs=216.7
Q ss_pred eeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHH
Q 009673 105 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN 181 (529)
Q Consensus 105 i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~ 181 (529)
+++..+++ ++++.+.+++.+.... ...|+. .....++++.+.+++.+.+|++.+. ..+|.+|+|+ +|+
T Consensus 3 ~~~~~g~p~~~~~~~~~~~~~~~~~~--~~~Y~~------~~G~~~lr~aia~~~~~~~g~~~~~-~~~Iiit~Gs~~ai 73 (350)
T TIGR03537 3 FDFGTGDPKEPTPPFIRKALIDAVPE--VSQYPS------ALGTKALREAISGWFERRFGVKLDP-DAQVLPSAGSKEAI 73 (350)
T ss_pred EeccCCCCCCCCCHHHHHHHHHHHhc--cCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCC-CCcEEEcCChHHHH
Confidence 34444443 3578888888765431 112332 1223466666678888777865321 0157789998 899
Q ss_pred HHHHHhhcCCC---CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEE
Q 009673 182 FEVYTAILKPH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (529)
Q Consensus 182 ~~~l~all~pG---D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~ 257 (529)
+.++.++++|| |+|++++|.|.++. ..+...|. ++++++++++ ++.+|++++++++.+ ++|+|++
T Consensus 74 ~~~~~~~~~~g~~~d~Vl~~~p~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~i~i 142 (350)
T TIGR03537 74 FHFPLVFIDPEEDRRRVIFGTPGYPVYE--------RGALFAGG--EPTAVKLKKEDGFLLRLEKVEKSILE-ETKIVWI 142 (350)
T ss_pred HHHHHHHcCCCCCCceEEEcCCCCcchH--------HHHHhcCC--EEEEcccCcccCCccCHHHHHHhhhh-ccEEEEE
Confidence 99999999988 69999998775443 23445565 7777777643 467999999999887 8999999
Q ss_pred cCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC-c--ccEEEecccccc--cCCCCeEEEee
Q 009673 258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y--CDVVTTTTHKSL--RGPRGGMIFFK 327 (529)
Q Consensus 258 ~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~--aDiv~~S~hK~l--~GprgG~i~~~ 327 (529)
+.|+||+ ..+ +++|.++|+++|+++|+|+++. .+...+..++... . -.+++.|+||++ +|.|.||++.+
T Consensus 143 ~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~ 221 (350)
T TIGR03537 143 NYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYT-EIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGD 221 (350)
T ss_pred eCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEecccc-ccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecC
Confidence 9899997 455 8889999999999999999854 2222221111111 1 237888999986 78899999987
Q ss_pred CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 407 (529)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~ 407 (529)
+ ++.+++.....+...+.+...+.++. .++. .....++.++++.++++.+.+.|.+.|+.+..+ ..+.++
T Consensus 222 ~------~~~~~~~~~~~~~~~~~~~~~q~~~~-~~l~--~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~-~g~~~~ 291 (350)
T TIGR03537 222 E------KLISFLRKLRANFGVASPDFVQAAAK-AAWS--DDNHVLERRKIFKRKRDLFIEFFNKVGLEYLYP-DATFYL 291 (350)
T ss_pred H------HHHHHHHHHHHhhccCCCHHHHHHHH-HHhC--CcHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-CeEEEE
Confidence 6 67666654433322333333223222 2332 112235667778888888999998888876654 235567
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
|+++.. +++..++.+.|.++||.+. ||.. +....+++||++. .+++++++..+.+++
T Consensus 292 ~~~~~~-~~~~~~l~~~L~~~gv~v~----~g~~f~~~~~~~~Ri~~~------~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 292 WVKVPS-GIDAKDYALRLLENGIVVA----PGENFGSGEEGYVRVALV------PTLEECEEALRLWER 349 (350)
T ss_pred EEECCC-CCCHHHHHHHHHHCCEEEc----CchhhCCCCCCEEEEEec------CCHHHHHHHHHHHhc
Confidence 777753 4566778888878999994 4433 1223578999862 236788887776653
No 74
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.93 E-value=4.5e-23 Score=217.29 Aligned_cols=340 Identities=16% Similarity=0.132 Sum_probs=217.7
Q ss_pred cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.++|..++. .+++.+++++...+......+|+. ..| ...+++.+.+++.+.+|.+.+. .-+|.+|+|+ +
T Consensus 34 ~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lR~~ia~~l~~~~~~~~~~-~~~I~it~G~~~ 106 (403)
T PRK08636 34 DIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSV---SKG---IYKLRLAICNWYKRKYNVDLDP-ETEVVATMGSKE 106 (403)
T ss_pred CEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCC---CCC---CHHHHHHHHHHHHHHhCCCCCC-CCeEEECCChHH
Confidence 4577765543 256667777765443211223432 122 3356666668888888865321 0147779998 9
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHH----HHHhhh--cCC
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDML----EKTAIL--FRP 252 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~l----e~~i~~--~~p 252 (529)
|+..++.++++|||.|++++|.|.++.. .....|. ++++++++. +++.+|++.+ +++++. .++
T Consensus 107 al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 176 (403)
T PRK08636 107 GYVHLVQAITNPGDVAIVPDPAYPIHSQ--------AFILAGG--NVHKMPLEYNEDFELDEDQFFENLEKALRESSPKP 176 (403)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEEeccccccCccChhhhhhHHHHHHhhccCCc
Confidence 9999999999999999999998765432 2344565 666666642 3478898754 555543 267
Q ss_pred cEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCC---CC-ccc--EEEecccccc--cCC
Q 009673 253 KLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK-YCD--VVTTTTHKSL--RGP 319 (529)
Q Consensus 253 klIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~-~aD--iv~~S~hK~l--~Gp 319 (529)
++|+++.|+||+ .. .+++|.++|++|++++|+|+++ ..+.+.+....+ ++ ..| +++.|++|++ +|.
T Consensus 177 ~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y-~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl 255 (403)
T PRK08636 177 KYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAY-ADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGW 255 (403)
T ss_pred eEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccc-hhhccCCCCCCChhcCCCccccEEEEEecccccCCccc
Confidence 889998889997 33 4678888999999999999984 444443321111 12 223 4578999987 899
Q ss_pred CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec
Q 009673 320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (529)
Q Consensus 320 rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~ 399 (529)
|.||+++++ ++.+.+.+.......+.+...+.++. .++... ....++.++.+.++++.+.+.|.+.|+.+..
T Consensus 256 RiG~iv~~~------~li~~~~~~~~~~~~~~~~~~q~~~~-~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 327 (403)
T PRK08636 256 RVGFVVGNK------KLVGALKKIKSWLDYGMFTPIQVAAT-IALDGD-QSCVEEIRETYRKRRDVLIESFANAGWELQK 327 (403)
T ss_pred eeeeeeCCH------HHHHHHHHHHHHhcccCChHHHHHHH-HHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence 999999887 67666554322111233334444332 234321 1223566777888888999999888877654
Q ss_pred CCCCCceEEEccCCC--CCcHHHHH-HhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 400 GGSDNHLVLVDLRPM--GIDGARVE-KILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 400 ~gt~~~~~~v~~~~~--~i~~~~~~-~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
+ ..+.++|+++++. +++..++. ++++++||.+. ||.. +....+++||++. ..++++++..+.|++
T Consensus 328 p-~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~----pg~~f~~~~~~~iRi~~~------~~~~~l~~~~~rl~~ 396 (403)
T PRK08636 328 P-RASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVS----PGIGFGEYGDEYVRIALI------ENENRIRQAARNIKK 396 (403)
T ss_pred C-CcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEe----cchhhCcCCCCeEEEEec------CCHHHHHHHHHHHHH
Confidence 4 2356778887532 23445554 55778999994 5543 1223578999873 347888888888887
Q ss_pred HHHH
Q 009673 476 GVEI 479 (529)
Q Consensus 476 ~~~~ 479 (529)
+++.
T Consensus 397 ~l~~ 400 (403)
T PRK08636 397 FLKE 400 (403)
T ss_pred HHHh
Confidence 7753
No 75
>PLN02656 tyrosine transaminase
Probab=99.93 E-value=1.1e-23 Score=222.18 Aligned_cols=345 Identities=16% Similarity=0.074 Sum_probs=222.0
Q ss_pred hcceeEecCCC------CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC
Q 009673 102 FKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL 175 (529)
Q Consensus 102 ~~~i~L~asen------~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~ 175 (529)
++.|+|..+++ .+|+.+++++.+.+......+|.. ..| ..++++.+.+++.+.+|...+. .+|.++
T Consensus 31 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lr~~ia~~~~~~~g~~~~~--~~i~~t 102 (409)
T PLN02656 31 KRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAP---TVG---LPQARRAIAEYLSRDLPYKLSL--DDVFIT 102 (409)
T ss_pred CeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCC---CCC---CHHHHHHHHHHHHHhcCCCCCc--ccEEEe
Confidence 46788887775 357999999987765432223322 112 2355555556776666654322 256667
Q ss_pred ChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCc
Q 009673 176 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPK 253 (529)
Q Consensus 176 sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pk 253 (529)
+|+ +|+..++.++++|||+|++++|.|..+. ......|. +++.++++++ ++.+|++++++.+++ +++
T Consensus 103 ~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g~--~~~~i~~~~~~~~~~d~~~l~~~~~~-~~~ 171 (409)
T PLN02656 103 SGCTQAIDVALSMLARPGANILLPRPGFPIYE--------LCAAFRHL--EVRYVDLLPEKGWEVDLDAVEALADQ-NTV 171 (409)
T ss_pred CChHHHHHHHHHHHhCCCCeEEEeCCCCCcHH--------HHHHHcCC--EEEEEeCCCcCCCCCCHHHHHHHhcc-Cce
Confidence 877 9999999999999999999999875431 12233454 6666666533 568999999998877 788
Q ss_pred EEEEcCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccccCCCC---Cc--ccEEEecccccc--cCCCC
Q 009673 254 LIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY--CDVVTTTTHKSL--RGPRG 321 (529)
Q Consensus 254 lIi~~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~~--aDiv~~S~hK~l--~Gprg 321 (529)
+|++++|+||+ . .++++|.++|+++|++||+|++ |.++.+.+....++ .. .-+++.|++|++ +|+|.
T Consensus 172 ~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~-y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRi 250 (409)
T PLN02656 172 ALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEV-YGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRL 250 (409)
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehh-hhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeE
Confidence 88888899987 3 3688999999999999999998 44555443211222 11 127789999984 89999
Q ss_pred eEEEeeCCCcc--hhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEe
Q 009673 322 GMIFFKKDPVL--GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV 398 (529)
Q Consensus 322 G~i~~~~~~~~--~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~ 398 (529)
||++++++... ..++.+++...... . ++++.....++..+++......+++.++++.++++.+.+.|++. ++...
T Consensus 251 G~~i~~~~~~~~~~~~~~~~~~~~~~~-~-~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~ 328 (409)
T PLN02656 251 GWFVTTDPSGSFRDPKIVERIKKYFDI-L-GGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCP 328 (409)
T ss_pred EEEEEeCcccccccHHHHHHHHHHHhh-h-cCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCC
Confidence 99998531000 01455555443221 1 22233333344445543212235777888889999999999875 33322
Q ss_pred cCCCCCceEEEccCC---CCC-cH-HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673 399 SGGSDNHLVLVDLRP---MGI-DG-ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473 (529)
Q Consensus 399 ~~gt~~~~~~v~~~~---~~i-~~-~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i 473 (529)
.....+.++|+++.. .+. +. +.+.++|.++||.+. ||.... .++++||++. .+++++++..+.|
T Consensus 329 ~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~----pg~~fg-~~~~iRi~~~------~~~e~l~eal~rl 397 (409)
T PLN02656 329 HKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIIL----PGTAVG-LKNWLRITFA------ADPSSLEEALGRI 397 (409)
T ss_pred cCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEe----cchhcC-CCCeEEEEeC------CCHHHHHHHHHHH
Confidence 222234667877742 112 23 346788899999994 554321 3578999964 2478888888888
Q ss_pred HHHHHH
Q 009673 474 HEGVEI 479 (529)
Q Consensus 474 ~~~~~~ 479 (529)
++++..
T Consensus 398 ~~~~~~ 403 (409)
T PLN02656 398 KSFYLR 403 (409)
T ss_pred HHHHHH
Confidence 877653
No 76
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.93 E-value=1.5e-23 Score=214.99 Aligned_cols=325 Identities=22% Similarity=0.260 Sum_probs=233.0
Q ss_pred ecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673 108 IASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (529)
Q Consensus 108 ~asen~~----~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~ 182 (529)
..|+||+ +|.+++++...+ .+|..|..++|...|+ +.+.+|| +.+++++|.+.. +..+||..||.
T Consensus 44 f~SNdYLGLa~~~~~~~a~~~~~-~~~g~g~~gsR~i~G~~~~h~~LE----~~lA~f~g~e~a-----l~f~SGy~AN~ 113 (388)
T COG0156 44 FCSNDYLGLASHPELIEAAKAAI-RRYGVGAGGSRLISGTSDLHVELE----EELADFLGAEAA-----LLFSSGFVANL 113 (388)
T ss_pred eeccCcccccCCHHHHHHHHHHH-HHhCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCcE-----EEEcccchhHH
Confidence 4577775 788999998776 4566778888966655 5567788 788999999962 55799999999
Q ss_pred HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEE
Q 009673 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIA 257 (529)
Q Consensus 183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pklIi~ 257 (529)
.++.+|+++||.|+.....|.+.+. .++.+++ +.+.|. ..|+++||+.+++. +.++|++
T Consensus 114 ~~i~~l~~~~dli~~D~lnHASiid--------G~rls~a--~~~~f~------HnD~~~Le~~l~~~~~~~~~~~~Ivt 177 (388)
T COG0156 114 GLLSALLKKGDLIFSDELNHASIID--------GIRLSRA--EVRRFK------HNDLDHLEALLEEARENGARRKLIVT 177 (388)
T ss_pred HHHHHhcCCCcEEEEechhhhhHHH--------HHHhCCC--cEEEec------CCCHHHHHHHHHhhhccCCCceEEEE
Confidence 9999999999999998887755431 3445554 555554 46889999999763 1456665
Q ss_pred c--CCCCCCCCCHHHHHHHHHHhCCEEEEeccccccccccc---cc-CCCCC--cccEEEecccccccCCCCeEEEeeCC
Q 009673 258 G--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAAS---VV-ADPFK--YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (529)
Q Consensus 258 ~--~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~---~~-~~~~~--~aDiv~~S~hK~l~GprgG~i~~~~~ 329 (529)
. +|+.+...|+++|++++++||+++++|+||+.|..... .. ...+. ..||+++|++|.| |--||++.++.
T Consensus 178 egVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAl-Gs~Gg~v~g~~- 255 (388)
T COG0156 178 EGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKAL-GSSGGYIAGSA- 255 (388)
T ss_pred eccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhh-cccCceeeCcH-
Confidence 5 67777799999999999999999999999999987642 11 11121 3589999999998 57889999998
Q ss_pred CcchhHHHhhhcccccCCCCCCChHH-HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673 330 PVLGVELESAINNAVFPGLQGGPHNH-TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~p~~~g~p~~~-~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~ 408 (529)
.+.+.+.....|++.++...+ ..++...+++.+. +..+.++++.++...+...+...|+.+.. +.++++.
T Consensus 256 -----~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~--~~~~~r~~L~~~~~~~~~~~~~~~~~~~~--s~s~I~p 326 (388)
T COG0156 256 -----ALIDYLRNRARPFIFSTALPPAVAAAALAALRILE--EGPERRERLQELAAFFRSLLKALGLVLLP--SESPIIP 326 (388)
T ss_pred -----HHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHhcCCccCC--CCCCeee
Confidence 777777655455554443333 3344445677654 34677888999999998777777887643 3456554
Q ss_pred EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
+-+.... ....+...|.+.||.+.....| +.|.+...+|++..+ .++++|++++++.+.++
T Consensus 327 v~~gd~~-~a~~~s~~l~~~Gi~v~~i~~P--TVp~gtarlRi~lta----~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 327 VILGDEE-RALEASRALLEEGIYVSAIRPP--TVPKGTARLRITLTA----AHTEEDIDRLAEALSEV 387 (388)
T ss_pred eEeCCHH-HHHHHHHHHHHCCeeEeeecCC--CCCCCcceEEEEecC----CCCHHHHHHHHHHHHhh
Confidence 4444322 2344555565559998764323 234456789998765 46799999999998764
No 77
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.93 E-value=3.5e-23 Score=216.45 Aligned_cols=335 Identities=16% Similarity=0.147 Sum_probs=216.6
Q ss_pred hcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673 102 FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (529)
Q Consensus 102 ~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs- 178 (529)
.+.|+|..++| +.++.+++++...+.......|+. .+...++ ++++++++|++++ +|.+++|+
T Consensus 28 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~------~~g~~~l----r~~ia~~l~~~~~----~v~~~~g~t 93 (380)
T PRK06225 28 KEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPP------PEGFPEL----RELILKDLGLDDD----EALITAGAT 93 (380)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCC------CcchHHH----HHHHHHhcCCCCC----cEEEeCCHH
Confidence 35688877776 468899999988775432222322 1222333 4778888999875 34456655
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC--CCCCCCHHHHHHHhhhcCCcEEE
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE--STGLVDYDMLEKTAILFRPKLII 256 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~--~~~~iD~d~le~~i~~~~pklIi 256 (529)
+|+..++.+++++||+|++++|.|..+. ..+...|. ++++++++. .++.+|++++++.+++ ++++|+
T Consensus 94 ~al~~~~~~~~~~gd~vl~~~p~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~v~ 162 (380)
T PRK06225 94 ESLYLVMRAFLSPGDNAVTPDPGYLIID--------NFASRFGA--EVIEVPIYSEECNYKLTPELVKENMDE-NTRLIY 162 (380)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchH--------HHHHHhCc--eEEeeccccccCCccCCHHHHHhhcCC-CceEEE
Confidence 9999999999999999999998664321 12234454 566666532 2468999999999887 789998
Q ss_pred EcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccc--cCCCCeEEEeeC
Q 009673 257 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL--RGPRGGMIFFKK 328 (529)
Q Consensus 257 ~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l--~GprgG~i~~~~ 328 (529)
+.+|+||+ .. ++++|.++|+++|+++|+|+++ .++.........+. ...+++.|++|++ +|.|.||+++++
T Consensus 163 l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~ 241 (380)
T PRK06225 163 LIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTY-RDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATP 241 (380)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhH-HHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecCH
Confidence 88888886 22 5889999999999999999984 23221110000111 2357888999987 477889999987
Q ss_pred CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceE
Q 009673 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLV 407 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~ 407 (529)
++.+.+...... ..+. +....++...++... ....+...+.+.++++.+.+.|++ .|+.+........++
T Consensus 242 ------~l~~~~~~~~~~-~~~~-~~~~~~~a~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 312 (380)
T PRK06225 242 ------DLIEVVKSIVIN-DLGT-NVIAQEAAIAGLKVK-DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMM 312 (380)
T ss_pred ------HHHHHHHHHHhc-ccCC-CHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEE
Confidence 676665543211 1222 222222222344321 112244445556667778888887 464332111234567
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
|+++...+++..++.+.|.++||.+..+...+ ....++++|+++. .++++++++++.|++++..
T Consensus 313 ~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~--~~~~~~~iR~s~~------~~~e~l~~~~~~l~~~~~~ 376 (380)
T PRK06225 313 VIDISEAGIDPEDLVEYLLERKIFVRQGTYTS--KRFGDRYIRVSFS------IPREQVEVFCEEFPDVVET 376 (380)
T ss_pred EEEcccccCCHHHHHHHHHHCCEEEcCCcccC--cCCCCceEEEEeC------CCHHHHHHHHHHHHHHHHH
Confidence 88876555677888888889999995432111 1224578999963 3579999999999988763
No 78
>PRK07777 aminotransferase; Validated
Probab=99.93 E-value=3.5e-23 Score=216.95 Aligned_cols=359 Identities=15% Similarity=0.135 Sum_probs=225.3
Q ss_pred cccCChHHHHHHHHHHHHhhcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673 83 LGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (529)
Q Consensus 83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~ 160 (529)
+....++++..+.+... ....++|..+.. ..++.+.+++...+.... .+|+. .....++++.+.+++.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~-~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~ 77 (387)
T PRK07777 6 LRPFGTTIFAEMSALAV-RTGAVNLGQGFPDEDGPPEMLEAAQEAIAGGV-NQYPP------GPGIPELRAAIAAQRRRR 77 (387)
T ss_pred hhhcCccHHHHHHHHHh-hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHH
Confidence 44445554443333332 235688876542 245667777766554321 12322 222346666666778888
Q ss_pred cCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC--CCC
Q 009673 161 FNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGL 237 (529)
Q Consensus 161 ~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~--~~~ 237 (529)
+|.+.+.- .+|.+++|+ +|+.+++.++++|||+|++..|.|.++. ..+...|. +++.++++++ ++.
T Consensus 78 ~g~~~~~~-~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~--------~~~~~~g~--~~~~~~~~~~~~~~~ 146 (387)
T PRK07777 78 YGLEYDPD-TEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYA--------AVIAMAGA--HRVPVPLVPDGRGFA 146 (387)
T ss_pred hCCCCCCC-CcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhH--------HHHHHCCC--EEEEeecCCccCCCc
Confidence 88864210 135567776 8999999999999999999998775432 12334454 5556666543 467
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC------Cccc
Q 009673 238 VDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF------KYCD 306 (529)
Q Consensus 238 iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~------~~aD 306 (529)
+|++++++.+.+ ++++|++++++||+ .. ++++|.++|+++|+++|+|+++ .++.+.+....++ ...+
T Consensus 147 ~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y-~~~~~~~~~~~~~~~~~~~~~~~ 224 (387)
T PRK07777 147 LDLDALRAAVTP-RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVY-EHLVFDGARHLPLATLPGMRERT 224 (387)
T ss_pred CCHHHHHHhcCc-ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccc-hhcccCCCCcccHhhCCCCcCcE
Confidence 999999999877 89999999888887 22 5889999999999999999985 4444332211121 1346
Q ss_pred EEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (529)
Q Consensus 307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~ 384 (529)
+++.|+||++ +|.|.||+++++ ++.+.+...........+...+. +++.++... ....+...+.+.++++
T Consensus 225 i~~~S~SK~~g~~GlRiG~~~~~~------~l~~~~~~~~~~~~~~~~~~~q~-~~~~~l~~~-~~~~~~~~~~~~~~~~ 296 (387)
T PRK07777 225 VTISSAAKTFNVTGWKIGWACGPA------PLIAAVRAAKQYLTYVGGAPFQP-AVAHALDHE-DAWVAALRDSLQAKRD 296 (387)
T ss_pred EEEeechhhccCcCceeEEEecCH------HHHHHHHHHHhhcccCCCCHHHH-HHHHHHhCC-cHHHHHHHHHHHHHHH
Confidence 8999999987 588889999887 56665543221111111222222 222334321 2233667788899999
Q ss_pred HHHHHHHhcCcEEecCCCCCceEEEccCCCC-CcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673 385 ALASRLVELGYKLVSGGSDNHLVLVDLRPMG-IDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 462 (529)
Q Consensus 385 ~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~-i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~ 462 (529)
.+.+.|.+.|+.+..+ ..++++|++++..+ .++.++.+.| +++||.|.++...+...+..++++||++. ..
T Consensus 297 ~l~~~L~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~------~~ 369 (387)
T PRK07777 297 RLAAGLAEAGFEVHDS-AGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFC------KR 369 (387)
T ss_pred HHHHHHHhCCCCccCC-CcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEec------CC
Confidence 9999999888876654 23566676764322 3556666666 67899995432111111123568999864 24
Q ss_pred HHHHHHHHHHHHHHH
Q 009673 463 EKEFVAIADFIHEGV 477 (529)
Q Consensus 463 ~~d~~~la~~i~~~~ 477 (529)
++++++..+.|.++.
T Consensus 370 ~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 370 DDTLDEAIRRLRALR 384 (387)
T ss_pred HHHHHHHHHHHHHHh
Confidence 788888888877654
No 79
>PRK07324 transaminase; Validated
Probab=99.93 E-value=1.1e-23 Score=219.66 Aligned_cols=328 Identities=19% Similarity=0.169 Sum_probs=211.0
Q ss_pred cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc-CCCCCCCceeeecCChH-
Q 009673 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-NLDENKWGVNVQPLSGS- 178 (529)
Q Consensus 103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~-g~~~~~~~~~V~~~sGs- 178 (529)
+.++|..+|. .+|+.+ +++...+.+.. .+|.. ..|. .+++ +.+++++ +++++ +|.+++|+
T Consensus 27 ~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~-~~Y~~---~~G~---~~lr----~~ia~~~~~~~~~----~vi~t~G~~ 90 (373)
T PRK07324 27 CIDSLTLEELLALAGKNP-EAFYQELGQKK-LTYGW---IEGS---PEFK----EAVASLYQNVKPE----NILQTNGAT 90 (373)
T ss_pred CCCCCcHHHHHhccCcch-HHHHHHHhcCC-ccCCC---CCCC---HHHH----HHHHHHhcCCChh----hEEEcCChH
Confidence 4566666664 356666 76665554321 13322 1122 3444 4455555 35554 45567776
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEE
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~ 257 (529)
+|+..++.++++|||+|+++.|.|..+. ..+...|. +++.++++++ ++.+|++++++.+++ ++|+|++
T Consensus 91 ~al~~~~~~l~~~gd~Vl~~~P~y~~~~--------~~~~~~g~--~v~~v~~~~~~~~~~d~~~l~~~~~~-~~kli~i 159 (373)
T PRK07324 91 GANFLVLYALVEPGDHVISVYPTYQQLY--------DIPESLGA--EVDYWQLKEENGWLPDLDELRRLVRP-NTKLICI 159 (373)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCchhHH--------HHHHHcCC--EEEEEecccccCCCCCHHHHHHhCCC-CCcEEEE
Confidence 9999999999999999999998765432 12234454 6667777654 367899999998877 8999999
Q ss_pred cCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccc--cCCCCeEEEeeC
Q 009673 258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKK 328 (529)
Q Consensus 258 ~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l--~GprgG~i~~~~ 328 (529)
++|+||+ ..+ +++|+++|++||+++++|++ |.++...+..++... .-.|++.|++|++ +|+|.||+++++
T Consensus 160 ~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~-y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~ 238 (373)
T PRK07324 160 NNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEV-YRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANE 238 (373)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcc-ccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCH
Confidence 9999987 555 88899999999999999998 456554332222222 1237889999986 699999999976
Q ss_pred CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceE
Q 009673 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLV 407 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~ 407 (529)
++.+.+.+.......+.+...+.++. .+++.. ....+...+.+.++++.+.+.|.+. ++.++.+. ...+.
T Consensus 239 ------~li~~~~~~~~~~~~~~~~~~q~~a~-~~l~~~-~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~-gg~~~ 309 (373)
T PRK07324 239 ------EVIDILRKYRDYTMICAGVFDDMLAS-LALEHR-DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPK-AVSTS 309 (373)
T ss_pred ------HHHHHHHHHhCcEEecCChHHHHHHH-HHHcCH-HHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCC-ceEEE
Confidence 67776665432222233333344332 234321 1123556667778888888888774 66655542 22344
Q ss_pred EEccCCCCCcHHHH-HHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARV-EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 408 ~v~~~~~~i~~~~~-~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
++.+.. +++..++ .++|+++||.+ .||.... .++++||++. ..++.+++..+.|.+.+..
T Consensus 310 ~i~~~~-~~~~~~~~~~ll~~~gv~v----~pg~~F~-~~~~iRis~~------~~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 310 FVKLDV-DMPSEDFCLKLLKETGVLL----VPGNRFD-LEGHVRIGYC------CDTETLKKGLKKLSEFLRE 370 (373)
T ss_pred EEEeCC-CCCHHHHHHHHHHhcCEEE----ECccccC-CCCeEEEEec------CCHHHHHHHHHHHHHHHHh
Confidence 554532 3455555 45568899999 4554421 3579999963 3467888888888777653
No 80
>PLN02187 rooty/superroot1
Probab=99.93 E-value=4.2e-23 Score=220.56 Aligned_cols=346 Identities=13% Similarity=0.081 Sum_probs=219.5
Q ss_pred cceeEecCCC-----C-CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC
Q 009673 103 KSLELIASEN-----F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS 176 (529)
Q Consensus 103 ~~i~L~asen-----~-~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s 176 (529)
+.|.|..++. + +++.+.+++...+......+|. ......++++.+.+++.+.+|...+. -+|.+++
T Consensus 67 ~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~------~~~G~~~lR~aiA~~~~~~~~~~~~~--~~I~it~ 138 (462)
T PLN02187 67 TILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYG------PGAGILPARRAVADYMNRDLPHKLTP--EDIFLTA 138 (462)
T ss_pred CeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC------CCCChHHHHHHHHHHHHHhcCCCCCc--ccEEEeC
Confidence 5688876653 2 4678888888776533212232 12223456655667776665543221 2566788
Q ss_pred hH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcE
Q 009673 177 GS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKL 254 (529)
Q Consensus 177 Gs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pkl 254 (529)
|+ +|+..++.++++|||+|++++|.|.++. ..+...|. +++.+++.+ +++.+|++++++++++ ++++
T Consensus 139 G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~--------~~~~~~g~--~~~~~~l~~~~~~~~d~~~l~~~~~~-~~~~ 207 (462)
T PLN02187 139 GCNQGIEIVFESLARPNANILLPRPGFPHYD--------ARAAYSGL--EVRKFDLLPEKEWEIDLEGIEAIADE-NTVA 207 (462)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCCCccHH--------HHHHHcCC--EEEEEeCccccCCccCHHHHHHhcCC-CcEE
Confidence 87 9999999999999999999999876432 12334555 555665543 3589999999999876 7889
Q ss_pred EEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC----c-ccEEEecccccc--cCCCCe
Q 009673 255 IIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----Y-CDVVTTTTHKSL--RGPRGG 322 (529)
Q Consensus 255 Ii~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~-aDiv~~S~hK~l--~GprgG 322 (529)
|++++|+||+ .. .+++|.++|++||++||+|++ |..+++.+....++. . .-++++|++|++ +|+|.|
T Consensus 208 v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~-Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG 286 (462)
T PLN02187 208 MVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEV-YDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIG 286 (462)
T ss_pred EEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEecc-ccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeE
Confidence 9998899997 44 478888999999999999998 455554432111221 1 126779999985 899999
Q ss_pred EEEeeCCCcchhHHHhhhcccccCC-CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEE-ecC
Q 009673 323 MIFFKKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL-VSG 400 (529)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v-~~~ 400 (529)
|++++++... .++.+.+.....+. ...+++....+++..+|+......+++..+.+.++++.+.+.|++.+... +..
T Consensus 287 ~~v~~~p~~~-~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~ 365 (462)
T PLN02187 287 WIALNDPEGV-FETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKK 365 (462)
T ss_pred EEEecCchhH-HHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCC
Confidence 9998542100 00222333222111 11222333334444456431112347778888999999999998854322 211
Q ss_pred CCCCceEEEccCC---CCC-cH-HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 401 GSDNHLVLVDLRP---MGI-DG-ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 401 gt~~~~~~v~~~~---~~i-~~-~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
.....++|+++.. .++ +. +.+.+++.++||.+. ||.... .+++|||++. ..++.+++..++|.+
T Consensus 366 P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~----pG~~fg-~~~~iRis~~------~~~e~l~~al~rL~~ 434 (462)
T PLN02187 366 PESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFL----PGDALG-LKNWMRITIG------VEAHMLEDALERLKG 434 (462)
T ss_pred CCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEE----CccccC-CCCeEEEEeC------CCHHHHHHHHHHHHH
Confidence 1234666776532 222 33 445677799999994 554321 3578999863 347888888888888
Q ss_pred HHHHH
Q 009673 476 GVEIT 480 (529)
Q Consensus 476 ~~~~~ 480 (529)
+++..
T Consensus 435 ~l~~~ 439 (462)
T PLN02187 435 FCTRH 439 (462)
T ss_pred HHHHh
Confidence 87644
No 81
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.93 E-value=6.1e-23 Score=215.53 Aligned_cols=335 Identities=16% Similarity=0.126 Sum_probs=219.9
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
..++|..+++. +++.+.+++...+.+.. ..|+. ......+++...+++.+.+|...+. .+|.+++|+ +
T Consensus 32 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~~~~g~~~ 102 (393)
T PRK05764 32 DVISLGAGEPDFDTPEHIKEAAIEALDDGK-TKYTP------AAGIPELREAIAAKLKRDNGLDYDP--SQVIVTTGAKQ 102 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCcCC------CCChHHHHHHHHHHHHHHhCCCCCH--HHEEEeCCcHH
Confidence 45777776653 46888898887765322 12322 2234566666667776666643211 245567776 8
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
|+..++.+++++||.|++++|.|.++.. .+...|. ++++++++++ ++.+|++++++.+++ ++++|+++
T Consensus 103 a~~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 171 (393)
T PRK05764 103 ALYNAFMALLDPGDEVIIPAPYWVSYPE--------MVKLAGG--VPVFVPTGEENGFKLTVEQLEAAITP-KTKALILN 171 (393)
T ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHH--------HHHHcCC--EEEEEecCcccCCcCCHHHHHHhhCc-cceEEEEE
Confidence 9999999999999999999997765421 2334454 6666666643 468999999999876 78999998
Q ss_pred CCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCC---C--C--cccEEEecccccc--cCCCCeEE
Q 009673 259 ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---F--K--YCDVVTTTTHKSL--RGPRGGMI 324 (529)
Q Consensus 259 ~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~--~--~aDiv~~S~hK~l--~GprgG~i 324 (529)
+|+||+ .. ++++|.++|++||+++++|+++. .+...+....+ + + ..++++.|++|++ +|+|.||+
T Consensus 172 ~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i 250 (393)
T PRK05764 172 SPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYE-KLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYA 250 (393)
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHCCcEEEEecccc-ceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEE
Confidence 888887 33 58899999999999999999854 44432211111 1 1 2468899999986 67788999
Q ss_pred EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCC
Q 009673 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSD 403 (529)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~ 403 (529)
++++ ++.+.+.........+.+...+. ++..++.. .....++..+++.++++.+.+.|++. |+.+..+ ..
T Consensus 251 ~~~~------~~~~~~~~~~~~~~~~~~~~~q~-~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~g 321 (393)
T PRK05764 251 AGPK------ELIKAMSKLQSHSTSNPTSIAQY-AAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKP-EG 321 (393)
T ss_pred ecCH------HHHHHHHHHHhhcccCCChHHHH-HHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC-Cc
Confidence 9887 67766654332222222233232 22334432 12234666777888888899999886 8877654 23
Q ss_pred CceEEEccCCC----CCcHHHHH-HhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 404 NHLVLVDLRPM----GIDGARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 404 ~~~~~v~~~~~----~i~~~~~~-~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
++++|+++... +.+..++. .+++++||.+. ||.... .+++|||++. .+++++++.++.|.++++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~f~-~~~~vRis~~------~~~~~~~~~i~~l~~~~~ 390 (393)
T PRK05764 322 AFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVV----PGIAFG-APGYVRLSYA------TSLEDLEEGLERIERFLE 390 (393)
T ss_pred ceEEEEecccccccccCCHHHHHHHHHHhCCEEEc----cccccC-CCCEEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 45667776532 11235554 45578999994 443321 2578999863 358999999999988775
No 82
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.92 E-value=5.2e-23 Score=213.50 Aligned_cols=311 Identities=17% Similarity=0.145 Sum_probs=206.4
Q ss_pred CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc
Q 009673 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 189 (529)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all 189 (529)
+-+++|++|+++|.....+ | +. .+++.+.+++++++++|.+. + +.+.+|++|+++++.+++
T Consensus 21 g~s~~~~~v~~a~~~~~~~-~---------~~----~~~~~~~~~~~~a~~~g~~~----~-~~~~g~t~al~~al~al~ 81 (363)
T TIGR01437 21 GVSTVSDEVADAQKRGAQN-Y---------FE----IKELVNKTGEYIANLLGVED----A-VIVSSASAGIAQSVAAVI 81 (363)
T ss_pred CCCCCCHHHHHHHHHHHhc-C---------CC----HHHHHHHHHHHHHHhhCCCe----E-EEEcCHHHHHHHHHHHHh
Confidence 4456899999999877533 2 11 23444456688999999874 2 445667799999999999
Q ss_pred CCCC---------------EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcE
Q 009673 190 KPHD---------------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL 254 (529)
Q Consensus 190 ~pGD---------------~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pkl 254 (529)
+||| +|+++.+.+ .++.. .....+...|. ++++++++ +.+|++++++++++ +|++
T Consensus 82 ~~Gd~~~~~~~~~s~~~~~eVi~~~~~~-~~~~~---~~~~~~~~~g~--~~v~v~~~---~~~d~~~le~ai~~-~t~a 151 (363)
T TIGR01437 82 TRGNRYLVENLHDSKIEVNEVVLPKGHN-VDYGA---PVETMVRLGGG--KVVEAGYA---NECSAEQLEAAITE-KTAA 151 (363)
T ss_pred cCCCcchhhcccccccccceEEEECccc-hhcCC---chHHHHHhcCC--eEEEEcCC---CCCCHHHHHHhcCh-hceE
Confidence 9998 777765322 11100 00112334554 66676653 57999999999988 8997
Q ss_pred EE-EcCCCCC--CCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccccCCCCeEEEeeCCC
Q 009673 255 II-AGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDP 330 (529)
Q Consensus 255 Ii-~~~s~~p--~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~GprgG~i~~~~~~ 330 (529)
|+ +++++++ ...|+++|.++|++||+++++|++|...+ ..... ++|++++|+||+|+||++|+++.++
T Consensus 152 i~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~------~~~~~~g~D~~~~S~~K~l~gp~~G~l~~~~-- 223 (363)
T TIGR01437 152 ILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL------QKYYRLGADLVIYSGAKAIEGPTSGLVLGKK-- 223 (363)
T ss_pred EEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch------HHHHHcCCCEEEEeCCcccCCCceEEEEEcH--
Confidence 66 4554444 37899999999999999999999986221 11111 5899999999999999999998876
Q ss_pred cchhHHHhhhcccccC---CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecC--CC--
Q 009673 331 VLGVELESAINNAVFP---GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSG--GS-- 402 (529)
Q Consensus 331 ~~~~~l~~~i~~~~~p---~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~--gt-- 402 (529)
++.+.+...... ..+.+ ...++++..+++.+...+ .+..++..++++.+.+.|.+ .|+.+... ..
T Consensus 224 ----~~i~~~~~~~~~~~~~~~~~--~~~~~gl~aAl~~~~~~~-~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~ 296 (363)
T TIGR01437 224 ----KYIEWVKLQSKGIGRAMKVG--KENILGLTAALEQYLSTG-KESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGR 296 (363)
T ss_pred ----HHHHHHHhccCCCcceeccC--HHHHHHHHHHHHHHHccC-cccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCC
Confidence 555544321111 11111 123677777887665322 33444555677789999988 58887632 11
Q ss_pred --CCceEEEccCCCCCcHHHHHHhHhcCC--eEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 403 --DNHLVLVDLRPMGIDGARVEKILDMAS--ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 403 --~~~~~~v~~~~~~i~~~~~~~~L~~~G--I~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
+...+.++....++++.++.+.|.+.| |.+... + ...+.+|++... ++++|++.++++|+++
T Consensus 297 ~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~--~-----~~~~~~~l~~~~-----~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 297 DIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGY--K-----ANEGIIEIDPRS-----VTGGQLDIIVERIREI 362 (363)
T ss_pred cCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeee--e-----ecCCeEEEEeec-----CCHHHHHHHHHHHHHh
Confidence 112223444335788899999998777 666431 1 235678888653 5589999999999875
No 83
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.92 E-value=8.3e-23 Score=212.16 Aligned_cols=322 Identities=14% Similarity=0.107 Sum_probs=208.9
Q ss_pred ecCCCCCcHHHHHHHhhhhhccCCCCCCCC-CC---CCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHH
Q 009673 108 IASENFTSRAVMEAVGSCLTNKYSEGLPGK-RY---YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANF 182 (529)
Q Consensus 108 ~asen~~~~~V~eal~~~l~~~y~~G~p~~-r~---~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~ 182 (529)
|.+..++.+.+++++..+.. .+ +.+.. .. ..+.+.+.+++ +.+++++|++. +.+++|+ +++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~l~----~~la~~~g~~~------i~~~~g~t~al~ 73 (361)
T cd06452 7 IQRGGRLTPEARKALIEWGD-GY--SVCDFCRGRLDEIEKPPIKDFH----HDLAEFLGMDE------ARVTPGAREGKF 73 (361)
T ss_pred hhcCCCCCHHHHHHHHHHhc-cc--CCccccccccccccCchHHHHH----HHHHHHcCCce------EEEeCCHHHHHH
Confidence 44567889999999986652 12 12211 00 11223344554 77889999832 3345555 8999
Q ss_pred HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhh------cCCcEE
Q 009673 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAIL------FRPKLI 255 (529)
Q Consensus 183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~------~~pklI 255 (529)
.++.++++|||+|++.++.|.+.+. .+...|. +++.++++.+ ++.+|++++++.+++ .++++|
T Consensus 74 ~~l~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv 143 (361)
T cd06452 74 AVMHSLCEKGDWVVVDGLAHYTSYV--------AAERAGL--NVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALA 143 (361)
T ss_pred HHHHHhcCCCCEEEEcCCcchHHHH--------HHHhcCC--EEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEE
Confidence 9999999999999998876654321 2334554 6666666543 358999999998863 268899
Q ss_pred EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccccC-CCCeEEEeeCCCc
Q 009673 256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPV 331 (529)
Q Consensus 256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~G-prgG~i~~~~~~~ 331 (529)
++++++|++ ..|+++|.++|+++|+++++|++|+.|..... ... ++|++++|+||++.+ +++|++++++
T Consensus 144 ~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~----~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~--- 216 (361)
T cd06452 144 LLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVS----GKELGADFIVGSGHKSMAASAPIGVLATTE--- 216 (361)
T ss_pred EEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCC----HHHcCCCEEEecCCccccCCCCeEEEEECH---
Confidence 999888775 78999999999999999999999887643211 111 589999999999854 4569999987
Q ss_pred chhHHHhhhcccccC-------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCC-C
Q 009673 332 LGVELESAINNAVFP-------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG-S 402 (529)
Q Consensus 332 ~~~~l~~~i~~~~~p-------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~g-t 402 (529)
++.+++.....+ ...+++....++++..+++... +..+..++..++++++.+.|++. |++++... .
T Consensus 217 ---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~ 291 (361)
T cd06452 217 ---EWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVK--ERVKRWDEEVEKARWFVAELEKIEGIKQLGEKPK 291 (361)
T ss_pred ---HHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCCC
Confidence 666665442211 1122333333434444554432 22223344456678899999986 99887421 2
Q ss_pred CCceEEEccCC-------CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 403 DNHLVLVDLRP-------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 403 ~~~~~~v~~~~-------~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
..+++.++... ...++.++.+.|.++||.+. .++ ....+|+++. |.+++|++.++++|++
T Consensus 292 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~---~~~-----~~~~~ri~~~-----g~~~e~~~~l~~al~~ 358 (361)
T cd06452 292 NHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGI---KPG-----LTRYFKLSTY-----GLTWEQVEYVVDAFKE 358 (361)
T ss_pred CCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEE---cCC-----CceEEEEEec-----CCCHHHHHHHHHHHHH
Confidence 33444454421 01123468888888899863 122 2457898863 4678999999999986
Q ss_pred HH
Q 009673 476 GV 477 (529)
Q Consensus 476 ~~ 477 (529)
+.
T Consensus 359 ~~ 360 (361)
T cd06452 359 IA 360 (361)
T ss_pred Hh
Confidence 53
No 84
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=5.9e-23 Score=212.44 Aligned_cols=317 Identities=15% Similarity=0.145 Sum_probs=216.0
Q ss_pred ceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HH
Q 009673 104 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 180 (529)
Q Consensus 104 ~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A 180 (529)
.+.|..+++. +|+.+.+++...+......+|+. +...+++ +.++++++++++ +|.+++|+ ++
T Consensus 24 ~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~-------~~~~~lr----~~ia~~~~~~~~----~i~it~G~~~~ 88 (351)
T PRK14807 24 KYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPD-------PTAEKLR----EELARYCSVVPT----NIFVGNGSDEI 88 (351)
T ss_pred eeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCC-------ccHHHHH----HHHHHHhCCCcc----cEEEecCHHHH
Confidence 4667777764 68999999887664222222322 1123443 667778888875 56678998 78
Q ss_pred HHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 009673 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (529)
Q Consensus 181 ~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s 260 (529)
+..++.++++|||+|++++|.|..+. ......|. +++.++++ +++.+|++++++.++..++|+|+++++
T Consensus 89 l~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~~~~k~v~l~~p 157 (351)
T PRK14807 89 IHLIMLAFINKGDVVIYPHPSFAMYS--------VYSKIAGA--VEIPVKLK-EDYTYDVGSFIKVIEKYQPKLVFLCNP 157 (351)
T ss_pred HHHHHHHhcCCCCEEEEeCCChHHHH--------HHHHHcCC--eEEEeecC-CCCCCCHHHHHHHhhccCCCEEEEeCC
Confidence 88888999999999999998765331 12234454 66677776 457899999999997658999999989
Q ss_pred CCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-c-ccEEEecccccc--cCCCCeEEEeeCCCcchh
Q 009673 261 AYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGV 334 (529)
Q Consensus 261 ~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~-aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~ 334 (529)
+||+ ..+.+++.++|++++.++|+|++|. ++. .......+. . -.++++|++|++ +|+|.||+++++
T Consensus 158 ~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~-~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~------ 229 (351)
T PRK14807 158 NNPTGSVIEREDIIKIIEKSRGIVVVDEAYF-EFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANE------ 229 (351)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCEEEEeCcch-hhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCH------
Confidence 9987 7789999999999899999999963 332 111111111 1 238889999986 789999999987
Q ss_pred HHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEEEccCC
Q 009673 335 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRP 413 (529)
Q Consensus 335 ~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~~~ 413 (529)
++.+.+.....+. ..+...+.+ +..+++. ..+++..+.+.++++.+.+.|.+ .|+.+..+ .+.++|+.+.
T Consensus 230 ~~~~~~~~~~~~~--~~~~~~q~~-~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~--~~~~~~i~~~- 300 (351)
T PRK14807 230 NILKYLNLVKSPY--NINSLSQVI-ALKVLRT---GVLKERVNYILNERERLIKELSKIPGIKVYPS--KTNFILVKFK- 300 (351)
T ss_pred HHHHHHHHccCCC--CcCHHHHHH-HHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcEECcC--CccEEEEEcC-
Confidence 6777665543222 122333332 2223432 34567777788888889999977 48776543 2456677664
Q ss_pred CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 414 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 414 ~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
+.+++.+.|.++||.|... ......++++||++. ..++++++.+.|++++
T Consensus 301 ---~~~~~~~~l~~~gV~v~~~----~~~~~~~~~iRis~~-------~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 301 ---DADYVYQGLLERGILVRDF----SKVEGLEGALRITVS-------SCEANDYLINGLKELL 350 (351)
T ss_pred ---CHHHHHHHHHHCCEEEEEC----CCCCCCCCeEEEEcC-------CHHHHHHHHHHHHHhh
Confidence 4567888888899999542 111123578999964 2688999998887653
No 85
>PRK06855 aminotransferase; Validated
Probab=99.92 E-value=6.8e-23 Score=217.71 Aligned_cols=346 Identities=16% Similarity=0.119 Sum_probs=216.0
Q ss_pred cceeEecCCC-----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673 103 KSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~asen-----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG 177 (529)
+.+.+..++. .+|+.+.+++...+.+.-..+|+. ..| ..++.+...+++.+.+|++.+. -+|.+|+|
T Consensus 33 ~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~---~~G---~~~LReaia~~~~~~~g~~~~~--~~I~it~G 104 (433)
T PRK06855 33 KITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCP---TKG---VLETREFLAELNNKRGGAQITP--DDIIFFNG 104 (433)
T ss_pred cccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCC---CCC---CHHHHHHHHHHHHhccCCCCCH--hHEEEcCc
Confidence 4577765554 568888888877654321123322 112 3456656668888777765321 26778999
Q ss_pred H-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhc-CCcE
Q 009673 178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-RPKL 254 (529)
Q Consensus 178 s-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~-~pkl 254 (529)
+ +|+..++. +++|||.|++.+|.|.++... .....| .+++.++++++ ++.+|+++|++.++.. ++++
T Consensus 105 ~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~-------~~~~~g--~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~ 174 (433)
T PRK06855 105 LGDAIAKIYG-LLRREARVIGPSPAYSTHSSA-------EAAHAG--YPPVTYRLDPENNWYPDLDDLENKVKYNPSIAG 174 (433)
T ss_pred HHHHHHHHHH-hcCCCCeEEEeCCCCchHHHH-------HHHhcC--CeEEEEecccccCCCCCHHHHHHHHhcCCCceE
Confidence 8 88887764 889999999999988653210 011223 36677777643 4689999999998742 5788
Q ss_pred EEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC----C-cccEEEecccccc--cCCCCe
Q 009673 255 IIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF----K-YCDVVTTTTHKSL--RGPRGG 322 (529)
Q Consensus 255 Ii~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~----~-~aDiv~~S~hK~l--~GprgG 322 (529)
+++++|+||+ .. .+++|.++|++||++||+|++ |..+.+.+....++ + +..|+++|++|++ +|+|.|
T Consensus 175 i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~-Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG 253 (433)
T PRK06855 175 ILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEI-YNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCG 253 (433)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc-ccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEE
Confidence 8888899997 34 467788889999999999998 45555543211222 1 1238889999987 799999
Q ss_pred EEEeeCCC--cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHHHhc-CcEEe
Q 009673 323 MIFFKKDP--VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRALASRLVEL-GYKLV 398 (529)
Q Consensus 323 ~i~~~~~~--~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~ 398 (529)
|++++... .....+.+.+...... ..+.+...+ .++..+++.-. ....++..+.+.++++.+.+.|.+. |+.+.
T Consensus 254 ~ii~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Q-~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~ 331 (433)
T PRK06855 254 WIEVYNADKDEVFKKYINSILNAKMI-EVCSTTLPQ-MAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVN 331 (433)
T ss_pred EEEEeCCchhhHHHHHHHHHHHhhcc-ccCCChHHH-HHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecc
Confidence 99984310 0000223333222111 112223323 33333443210 1123566777888888999999774 76654
Q ss_pred cCCCCCceEEEccCCCC--------------------------CcH-HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEE
Q 009673 399 SGGSDNHLVLVDLRPMG--------------------------IDG-ARVEKILDMASITLNKNSVPGDKSALVPGGIRI 451 (529)
Q Consensus 399 ~~gt~~~~~~v~~~~~~--------------------------i~~-~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRi 451 (529)
.+ ..++++|++++..- .+. +.+..+|+++||.+ +||+.......++||
T Consensus 332 ~p-~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v----~PG~~F~~~~~~~Rl 406 (433)
T PRK06855 332 RT-NGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICV----VPLSSFCTELNGFRV 406 (433)
T ss_pred CC-CeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEE----ecCCcCCCCCCceEE
Confidence 43 23567788885320 112 33456678999999 566542112346999
Q ss_pred ccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 452 GSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 452 g~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
++.. .+++++++..+.|.+++..
T Consensus 407 s~~~-----~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 407 TLLE-----RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred EECC-----CcHHHHHHHHHHHHHHHHH
Confidence 9753 3479999999999888763
No 86
>PRK14012 cysteine desulfurase; Provisional
Probab=99.92 E-value=6.1e-23 Score=216.36 Aligned_cols=340 Identities=15% Similarity=0.174 Sum_probs=219.6
Q ss_pred cCCCCCcHHHHHHHhhhhh--ccCCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHH
Q 009673 109 ASENFTSRAVMEAVGSCLT--NKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (529)
Q Consensus 109 asen~~~~~V~eal~~~l~--~~y~~G~p~~r~~-~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l 185 (529)
++..++|+.|++++...+. +.+. .++.+.. .+....+.++ .+++++++++|++++++ +...+|++++..++
T Consensus 10 a~~~~~~~~v~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~r~~ia~~~g~~~~~v---~~~~g~t~al~~~l 83 (404)
T PRK14012 10 SATTPVDPRVAEKMMPYLTMDGTFG--NPASRSHRFGWQAEEAVD-IARNQIADLIGADPREI---VFTSGATESDNLAI 83 (404)
T ss_pred cCCCCCCHHHHHHHHHHHHhcccCc--CCCchhhHHHHHHHHHHH-HHHHHHHHHcCcCcCeE---EEeCCHHHHHHHHH
Confidence 3456889999999988775 4442 2322111 1111112233 45688999999987532 33455668988887
Q ss_pred Hhh----cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673 186 TAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (529)
Q Consensus 186 ~al----l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (529)
.++ .++||+|++.+++|.+...... .+...|. +++.++++ +++.+|+++|++++++ ++++|++...+
T Consensus 84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~-----~~~~~g~--~~~~v~~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~~ 154 (404)
T PRK14012 84 KGAAHFYQKKGKHIITSKTEHKAVLDTCR-----QLEREGF--EVTYLDPQ-SNGIIDLEKLEAAMRD-DTILVSIMHVN 154 (404)
T ss_pred HHHHHhhcCCCCEEEEecCccHHHHHHHH-----HHHhCCC--EEEEEccC-CCCcCCHHHHHHhcCC-CCEEEEEECcC
Confidence 766 3799999999888765432211 1112354 56666666 4688999999999987 89999888776
Q ss_pred CCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHh
Q 009673 262 YPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (529)
Q Consensus 262 ~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~ 338 (529)
|++ ..|+++|.++|+++|+++++|++|+.|....+... .++|++++|+||.+ ||.| |+++++++ ...
T Consensus 155 n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~---~~~D~~~~s~~K~~-gp~g~G~l~~~~~------~~~ 224 (404)
T PRK14012 155 NEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSK---LKVDLMSFSAHKIY-GPKGIGALYVRRK------PRV 224 (404)
T ss_pred CCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCccc---CCCCEEEEehhhcc-CCCceEEEEEecC------CCC
Confidence 655 78999999999999999999999988765433221 15899999999955 7777 88888874 111
Q ss_pred hhccccc------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCC--CCCceEEE
Q 009673 339 AINNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGG--SDNHLVLV 409 (529)
Q Consensus 339 ~i~~~~~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~g--t~~~~~~v 409 (529)
++..... ....|+++...+.++..+++... .+..+..++..+.++++.+.|++ .++.+.... ...+..++
T Consensus 225 ~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~ 303 (404)
T PRK14012 225 RLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAK-EEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNV 303 (404)
T ss_pred CCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEE
Confidence 2211100 01245677888888887887654 34566777888888888888877 456654321 11222222
Q ss_pred ccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC------------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 410 DLRPMGIDGARVEKILDMASITLNKNSVPGDK------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 410 ~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~------------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
.+.. .+.+.+...|++.+|.....+.|... .....+.|||+++..+ +++|++++++.|++++
T Consensus 304 ~~~~--~~~~~~~~~l~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~----t~~dvd~~~~~l~~~~ 377 (404)
T PRK14012 304 SFNY--VEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFT----TEEEIDYAIELVRKSI 377 (404)
T ss_pred EEeC--cCHHHHHHhCCCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCC----CHHHHHHHHHHHHHHH
Confidence 2221 13456666676444443322223211 0112468999988765 4899999999999987
Q ss_pred HHH
Q 009673 478 EIT 480 (529)
Q Consensus 478 ~~~ 480 (529)
...
T Consensus 378 ~~~ 380 (404)
T PRK14012 378 GKL 380 (404)
T ss_pred HHH
Confidence 754
No 87
>PRK08363 alanine aminotransferase; Validated
Probab=99.92 E-value=1.3e-22 Score=213.41 Aligned_cols=336 Identities=16% Similarity=0.102 Sum_probs=214.8
Q ss_pred cceeEecCCC-----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673 103 KSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~asen-----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG 177 (529)
+.|+|..++. .+++.+.+++...+.+.. ..| +......++++...+++...+|...+. .+|.+++|
T Consensus 31 ~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~-~~Y------~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~it~G 101 (398)
T PRK08363 31 KVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGH-NYY------GPSEGLPELREAIVKREKRKNGVDITP--DDVRVTAA 101 (398)
T ss_pred CeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCC-CCC------CCCCCcHHHHHHHHHHHHHhcCCCCCh--hhEEEeCC
Confidence 5688887664 368889999987764321 112 212224566666667776666643221 25666888
Q ss_pred H-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEc-ccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673 178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDESTGLVDYDMLEKTAILFRPKLI 255 (529)
Q Consensus 178 s-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~-~v~~~~~~iD~d~le~~i~~~~pklI 255 (529)
+ +|+..++.++++|||+|++++|.|.++.. .+...|. +++.+ +++++++.+|++++++.+++ ++++|
T Consensus 102 ~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~v~~~~~~~~~~~~d~~~l~~~~~~-~~~~v 170 (398)
T PRK08363 102 VTEALQLIFGALLDPGDEILIPGPSYPPYTG--------LVKFYGG--VPVEYRTIEEEGWQPDIDDIRKKITE-KTKAI 170 (398)
T ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCC--EEEEeccccccCCcCCHHHHHhhCCc-ceEEE
Confidence 6 89999999999999999999998765431 2233443 55555 45545678999999999877 78999
Q ss_pred EEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC--CCcc--cEEEecccccc--cCCCCeEE
Q 009673 256 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FKYC--DVVTTTTHKSL--RGPRGGMI 324 (529)
Q Consensus 256 i~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~--~~~a--Div~~S~hK~l--~GprgG~i 324 (529)
++++|+||+ ..+ +++|.++|+++|+++|+|+++. .+.+.+..... +... -+++.|+||++ +|.|.||+
T Consensus 171 ~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~ 249 (398)
T PRK08363 171 AVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYD-LMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYI 249 (398)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhh-hhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEE
Confidence 999889987 344 8899999999999999999854 44433211111 1111 26679999984 78899999
Q ss_pred Ee--eCCCcchhHHHhhhccccc---CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEe
Q 009673 325 FF--KKDPVLGVELESAINNAVF---PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV 398 (529)
Q Consensus 325 ~~--~~~~~~~~~l~~~i~~~~~---p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~ 398 (529)
++ ++ ++.+.+..... ....+.....+.+ +..+|.. .....++..+++.++++.+.+.|.+. |+.+.
T Consensus 250 ~~~~~~------~~~~~l~~~~~~~~~~~~~~s~~~q~~-~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~ 321 (398)
T PRK08363 250 YFVDPE------GKLAEVREAIDKLARIRLCPNTPAQFA-AIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGISTT 321 (398)
T ss_pred EEeCcH------HHHHHHHHHHHHHhcccccCChHHHHH-HHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCEec
Confidence 98 43 33333322110 0001222222222 2334432 12234677788889999999999875 77765
Q ss_pred cCCCCCceEEEccCCCC-CcH-HHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 399 SGGSDNHLVLVDLRPMG-IDG-ARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 399 ~~gt~~~~~~v~~~~~~-i~~-~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
.+ ..+++.|+.+.... .+. +.+.++|+++||.+. ||.. +...++++||++. .+++++++..+.|.+
T Consensus 322 ~p-~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~----~g~~f~~~~~~~iRis~~------~~~~~l~~~l~~l~~ 390 (398)
T PRK08363 322 KP-QGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFV----HGSGFGEYGAGHFRLVFL------PPVEILEEAMDRFEE 390 (398)
T ss_pred CC-CeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCeEEEEec------CCHHHHHHHHHHHHH
Confidence 43 23455555664311 133 445677899999994 4443 2223578999963 247889988888887
Q ss_pred HHH
Q 009673 476 GVE 478 (529)
Q Consensus 476 ~~~ 478 (529)
++.
T Consensus 391 ~~~ 393 (398)
T PRK08363 391 FMR 393 (398)
T ss_pred HHH
Confidence 665
No 88
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.92 E-value=9.7e-23 Score=214.28 Aligned_cols=294 Identities=19% Similarity=0.145 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCC--CCEEEEcCCCCCcccccccccccccccccc--
Q 009673 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKP--HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-- 221 (529)
Q Consensus 147 d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~p--GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g-- 221 (529)
.++.+.+++++++++|++.++ +.+. .+|+ +++.+++.+++++ ||+|+++++.|+++... +...+
T Consensus 63 ~~~~~~~~~~la~~~g~~~~~--v~~~-~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~--------~~~~~~~ 131 (398)
T cd00613 63 LQALFELQTMLCELTGMDVAN--ASLQ-DEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAV--------ARTRGEP 131 (398)
T ss_pred HHHHHHHHHHHHHHHCCCccc--eecc-CchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHH--------HHHhccc
Confidence 355556678999999998643 3333 4455 5666666677776 99999999988766321 12222
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCH-HHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDY-PRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~-~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
...+++.++++ +++.+|++++++.+.+ ++++|++++++..+ ..|+ ++|+++|+++|+++|+|++|..+.......
T Consensus 132 ~g~~~~~v~~~-~~~~~d~~~l~~~i~~-~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~- 208 (398)
T cd00613 132 LGIEVVEVPSD-EGGTVDLEALKEEVSE-EVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPG- 208 (398)
T ss_pred CCcEEEEeccC-CCCCcCHHHHHHhcCC-CeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChH-
Confidence 01255566664 3568999999999987 89999888665333 5565 999999999999999999886654221110
Q ss_pred CCCCcccEEEecccccc-----cCCCCeEEEeeCCCcchhHHHhhhccc-----------------------------cc
Q 009673 300 DPFKYCDVVTTTTHKSL-----RGPRGGMIFFKKDPVLGVELESAINNA-----------------------------VF 345 (529)
Q Consensus 300 ~~~~~aDiv~~S~hK~l-----~GprgG~i~~~~~~~~~~~l~~~i~~~-----------------------------~~ 345 (529)
..++|++++|+|||+ .||++|++++++ ++.+.+... ..
T Consensus 209 --~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~ 280 (398)
T cd00613 209 --EYGADIVVGNLQKTGVPHGGGGPGAGFFAVKK------ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKAT 280 (398)
T ss_pred --HcCCCEEEeeccccCCCCCCCCCceeEEEEhh------hhHhhCCCCeeccccccCCCcceEEecccchhhccccccc
Confidence 115899999999997 247789999987 344332110 00
Q ss_pred CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC-CCcHHHHHHh
Q 009673 346 PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM-GIDGARVEKI 424 (529)
Q Consensus 346 p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~-~i~~~~~~~~ 424 (529)
+.+.++ .....++.+.++......++++..+++.++++++.+.|++.+......+...+.+++++... +.+..++.+.
T Consensus 281 ~~~~~~-~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 359 (398)
T cd00613 281 SNICTG-QALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKA 359 (398)
T ss_pred ccceec-HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHh
Confidence 001111 12222223334555555567888899999999999999986554322221223345555421 3455678888
Q ss_pred HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673 425 LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473 (529)
Q Consensus 425 L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i 473 (529)
|.+.||.+.... | ..++.||++.+.++| ++|++++++.|
T Consensus 360 L~~~gi~~~~~~-~-----~~~~~lRis~~~~~t----~edid~~~~~L 398 (398)
T cd00613 360 LIDGGFHAPTMY-L-----PVDGTLMIEPTETET----KEELDALLEAL 398 (398)
T ss_pred hhhcCccccccc-c-----CCCCeEEEEcCCCCC----HHHHHHHHHhC
Confidence 888999874321 1 135789999877654 89999998764
No 89
>PRK09148 aminotransferase; Validated
Probab=99.92 E-value=2.3e-22 Score=212.05 Aligned_cols=340 Identities=14% Similarity=0.099 Sum_probs=213.8
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
..|+|..+++. +++.+++++...+.+....+|+. ..| ..++++...+++.+.+|.+.+. .-+|.+|+|+ +
T Consensus 31 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lr~aia~~~~~~~g~~~~~-~~~I~it~G~~~ 103 (405)
T PRK09148 31 DIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSA---SKG---IPGLRRAQAAYYARRFGVKLNP-DTQVVATLGSKE 103 (405)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCC---CCC---CHHHHHHHHHHHHHHhCCCCCC-CCcEEEcCChHH
Confidence 45788776653 46888888876653221123332 112 2355556667777777764221 0156779988 9
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCC-CCCCHHHHHHHhhhcCCcEEEEc
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~-~~iD~d~le~~i~~~~pklIi~~ 258 (529)
++..++.++++|||+|++++|.|.++.. .....|. ++++++++.++ +..+++++.+...+ ++++|+++
T Consensus 104 al~~~~~~l~~~gd~Vl~~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~~~~l~~~~~~~~~-~~~~v~l~ 172 (405)
T PRK09148 104 GFANMAQAITAPGDVILCPNPSYPIHAF--------GFIMAGG--VIRSVPAEPDEEFFPALERAVRHSIP-KPIALIVN 172 (405)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHhcCC--EEEEEeCCCCCCCccCHHHHHhhccc-cceEEEEe
Confidence 9999999999999999999998765421 1233454 66666665433 44455544433334 78999999
Q ss_pred CCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccc-cCCC--CC---cccEEEecccccc--cCCCCeEEE
Q 009673 259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--FK---YCDVVTTTTHKSL--RGPRGGMIF 325 (529)
Q Consensus 259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~--~~---~aDiv~~S~hK~l--~GprgG~i~ 325 (529)
.|+||+ ..+ +++|.++|++||++||+|+++ ..+.+.+. .++. ++ ...+++.|++|.+ +|+|.||++
T Consensus 173 ~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y-~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v 251 (405)
T PRK09148 173 YPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAY-SEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAV 251 (405)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccc-hhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeee
Confidence 999997 444 467888999999999999984 44443221 1111 11 1236689999986 789999999
Q ss_pred eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 405 (529)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~ 405 (529)
+++ ++.+.+.........+.+...+.++ ..+|.. .....+..++++.++++.+.+.|.+.|+.+..+ ..+.
T Consensus 252 ~~~------~~i~~l~~~~~~~~~~~~~~~q~~~-~~~L~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p-~~g~ 322 (405)
T PRK09148 252 GNE------RLIAALTRVKSYLDYGAFTPIQVAA-TAALNG-PQDCIAEMRELYKKRRDVLVESFGRAGWDIPPP-AASM 322 (405)
T ss_pred CCH------HHHHHHHHHHHHhccCCChHHHHHH-HHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCC-CeeE
Confidence 987 6777665432211122222333332 223432 112346677888999999999999888865543 2356
Q ss_pred eEEEccCCC--CCcHHHHH-HhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 406 LVLVDLRPM--GIDGARVE-KILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 406 ~~~v~~~~~--~i~~~~~~-~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
++|++++.. .++..++. .+|++.||.|. ||.. +...++++||++. ..++++++..+.|.+++...
T Consensus 323 f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~f~~~~~~~~Ri~~~------~~~~~l~~al~~l~~~l~~~ 391 (405)
T PRK09148 323 FAWAPIPEAFRHLGSLEFSKLLVEKADVAVA----PGVGFGEHGDGYVRIALV------ENEQRIRQAARNIKRFLSSA 391 (405)
T ss_pred EEEEECCCccCCCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCeEEEEec------CCHHHHHHHHHHHHHHHHHH
Confidence 678777532 12344554 45678999994 4443 1123578999874 23688888888887777543
No 90
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.92 E-value=1.1e-22 Score=212.50 Aligned_cols=330 Identities=17% Similarity=0.196 Sum_probs=216.1
Q ss_pred cceeEecCCC--C-CcHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673 103 KSLELIASEN--F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (529)
Q Consensus 103 ~~i~L~asen--~-~~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs 178 (529)
+.|++..+++ + .+|.|++++...+. +|..+++..+...|. +..++ .++++++++|.+. .+.+++|+
T Consensus 40 ~~id~~~~~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~----l~~~la~~~~~~~-----~i~~~~g~ 109 (385)
T PRK05958 40 RMLNFASNDYLGLARHPRLIAAAQQAAR-RYGAGSGGSRLVTGNSPAHEA----LEEELAEWFGAER-----ALLFSSGY 109 (385)
T ss_pred eEEEeeCCCcccCCCCHHHHHHHHHHHH-hcCCCCCCcCcccCCcHHHHH----HHHHHHHHhCCCc-----EEEECcHH
Confidence 5577877764 3 57899999988774 344333333322222 22233 4477888888532 45668888
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEE
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLII 256 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi 256 (529)
+++..++.++++|||+|++.++.|+++.. .....|. +++.++ ..|++++++.++.. ++.+++
T Consensus 110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~i~~~~~~~~lvi 173 (385)
T PRK05958 110 AANLAVLTALAGKGDLIVSDKLNHASLID--------GARLSRA--RVRRYP------HNDVDALEALLAKWRAGRALIV 173 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEeCccCHHHHH--------HHHhcCC--ceEEeC------CCCHHHHHHHHHhccCCCeEEE
Confidence 88888888889999999999988765432 2233443 344433 24889999988763 245566
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccc-cc-cCC--CCC-c-ccEEEecccccccCCCCeEEEeeC
Q 009673 257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV-VAD--PFK-Y-CDVVTTTTHKSLRGPRGGMIFFKK 328 (529)
Q Consensus 257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~~-~~~--~~~-~-aDiv~~S~hK~l~GprgG~i~~~~ 328 (529)
++.+.+++ ..++++|+++|++||+++|+|++|..|.... +. ... .+. . .++++.|+||++ |+.||+++.++
T Consensus 174 ~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~Gg~~~~~~ 252 (385)
T PRK05958 174 TESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKAL-GSSGAAVLGSE 252 (385)
T ss_pred EEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhc-ccCCcEEEcCH
Confidence 65554443 6789999999999999999999987665431 11 010 122 2 348889999998 66789998886
Q ss_pred CCcchhHHHhhhcccccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673 329 DPVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 407 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~ 407 (529)
++.+.+.....+.. .++++..+++++..+++..... +...+++.++++.+.+.|++.|+++..+ .+.++
T Consensus 253 ------~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~ 322 (385)
T PRK05958 253 ------TLIDYLINRARPFIFTTALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRALGFQLMDS--QSAIQ 322 (385)
T ss_pred ------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCCC--CCCEE
Confidence 56665543222222 2334455555555677655332 4667888899999999999888876553 23455
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
++.+.. ..+..++.+.|.+.||.+.....|. .+..+.++||+.+.. .+++|++++++.|+++
T Consensus 323 ~~~~~~-~~~~~~~~~~l~~~gI~v~~~~~~~--~~~~~~~lRis~~~~----~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 323 PLIVGD-NERALALAAALQEQGFWVGAIRPPT--VPAGTSRLRITLTAA----HTEADIDRLLEALAEA 384 (385)
T ss_pred EEEeCC-HHHHHHHHHHHHHCCceEecccCCC--CCCCCceEEEEecCC----CCHHHHHHHHHHHHhc
Confidence 665532 2345668888888999996432221 112346899997643 3589999999999765
No 91
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.92 E-value=3.9e-23 Score=215.83 Aligned_cols=324 Identities=15% Similarity=0.162 Sum_probs=211.7
Q ss_pred CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cC
Q 009673 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LK 190 (529)
Q Consensus 112 n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~ 190 (529)
...+++.++++...+.+.+. +. .+...++| +.+++++|.+. .|.++||++|+.+++.++ ++
T Consensus 10 p~~~~~e~~~~~~~l~~~~~--------~~-g~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~lal~al~~~ 71 (379)
T PRK11658 10 PAMGDEELAAVKEVLRSGWI--------TT-GPKNQALE----QAFCQLTGNQH-----AIAVSSATAGMHITLMALGIG 71 (379)
T ss_pred CCCCHHHHHHHHHHHHcCCc--------cC-CHhHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCC
Confidence 33456667777766654331 11 24467777 67889999874 255688899999999999 89
Q ss_pred CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHH
Q 009673 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPR 270 (529)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~ 270 (529)
|||+|++++++|.+... .+...|. +++.++++++++.+|++++++.+++ ++|+|+..++ ++...|+++
T Consensus 72 ~Gd~Viv~~~~~~~~~~--------~~~~~G~--~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~~~~~-~G~~~d~~~ 139 (379)
T PRK11658 72 PGDEVITPSLTWVSTLN--------MIVLLGA--TPVMVDVDRDTLMVTPEAIEAAITP-RTKAIIPVHY-AGAPADLDA 139 (379)
T ss_pred CCCEEEECCCcHHHHHH--------HHHHcCC--EEEEEecCCCcCCcCHHHHHHhccc-CCeEEEEeCC-CCCcCCHHH
Confidence 99999999987765421 2334555 7777778766778999999999987 8998886543 445789999
Q ss_pred HHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccccCCC--
Q 009673 271 MRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL-- 348 (529)
Q Consensus 271 i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~-- 348 (529)
|.++|+++|++||+|++|..|....+...... +.++++++.+|.+++++||+++++++ ++.++++.....+.
T Consensus 140 i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~-g~~~~Sf~~~K~l~~g~GG~v~~~~~-----~~~~~~~~~~~~G~~~ 213 (379)
T PRK11658 140 IRAIGERYGIPVIEDAAHAVGTYYKGRHIGAR-GTAIFSFHAIKNITCAEGGLVVTDDD-----ELADRLRSLKFHGLGV 213 (379)
T ss_pred HHHHHHHcCCeEEEECCCccCCeECCeecCCC-CCEEEeCCCCCcCcccCceEEEECCH-----HHHHHHHHHHHcCCCc
Confidence 99999999999999999998877654222111 34677778889999999999998764 55444432111110
Q ss_pred ------------------CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe-cCCC---CC-c
Q 009673 349 ------------------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV-SGGS---DN-H 405 (529)
Q Consensus 349 ------------------~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~-~~gt---~~-~ 405 (529)
.|. + ..+..+.+|+...+...+++..++.+++++.+.+.|.+.++..+ .+.. .+ +
T Consensus 214 ~~~~~~~~~~~~~~~~~~~G~-n-~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~ 291 (379)
T PRK11658 214 DAFDRQTQGRAPQAEVLTPGY-K-YNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWH 291 (379)
T ss_pred chhhhhcccCCCcceeecccc-c-cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEE
Confidence 011 0 11222233333333345677777888888888888877543322 2211 11 3
Q ss_pred eEEEccCC--CCCcHHHHHHhHhcCCeEEcCCCCCCCCCC-CC--------C-------CeEEEccCCCccCCCCHHHHH
Q 009673 406 LVLVDLRP--MGIDGARVEKILDMASITLNKNSVPGDKSA-LV--------P-------GGIRIGSPAMTTRGFSEKEFV 467 (529)
Q Consensus 406 ~~~v~~~~--~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~-~~--------~-------~~iRig~~~~tt~g~~~~d~~ 467 (529)
++.+.+.. .+++.+++.+.|++.||.+...+.|.+..+ +. + ..|. +|. ..+++++|++
T Consensus 292 ~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~--lP~--~~~l~~~~~~ 367 (379)
T PRK11658 292 LFIIRVDEERCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICS--LPL--FPDMTDADVD 367 (379)
T ss_pred EEEEEECCccccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEE--ccC--CCCCCHHHHH
Confidence 33333322 245778899999999998765444443211 10 0 1222 231 1468899999
Q ss_pred HHHHHHHHHH
Q 009673 468 AIADFIHEGV 477 (529)
Q Consensus 468 ~la~~i~~~~ 477 (529)
++++.|++++
T Consensus 368 ~i~~~i~~~~ 377 (379)
T PRK11658 368 RVITALQQIA 377 (379)
T ss_pred HHHHHHHHHH
Confidence 9999998864
No 92
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=3.7e-23 Score=214.33 Aligned_cols=320 Identities=18% Similarity=0.145 Sum_probs=219.5
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.++|..++|+ +|+.+++++...+......+|+. .| ..+++ +.+++++|.+.+ .+|.+++|+ +
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----~~---~~~lr----~~ia~~~~~~~~---~~I~~t~G~~~ 92 (356)
T PRK04870 27 GMVKLDAMENPYRLPAELRAELGERLAEVALNRYPD----PR---AAALK----AALRAAMGVPAG---ADVLLGNGSDE 92 (356)
T ss_pred CceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC----CC---HHHHH----HHHHHHhCcCCC---CcEEEcCCHHH
Confidence 56888888884 68999999987764321123432 01 23333 667788888653 256779998 7
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
++..++.++++|||+|++++|.|.++. ..+...|. ++++++++ +++.+|++++++.+...++++|++++
T Consensus 93 ~i~~~~~~~~~~gd~vlv~~P~y~~~~--------~~~~~~g~--~~~~i~~~-~~~~~d~~~l~~~~~~~~~~~v~l~~ 161 (356)
T PRK04870 93 LIQLLALACAKPGATVLAPEPGFVMYR--------MSAKLAGL--EFVGVPLT-ADFTLDLPAMLAAIAEHRPALVFLAY 161 (356)
T ss_pred HHHHHHHHhcCCCCEEEECCCCHHHHH--------HHHHHcCC--EEEEecCC-CCCCCCHHHHHHHhhcCCCCEEEEcC
Confidence 888888899999999999998765432 12344565 67777776 45789999999998765899999998
Q ss_pred CCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-c-ccEEEeccccc-ccCCCCeEEEeeCCCcchh
Q 009673 260 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKS-LRGPRGGMIFFKKDPVLGV 334 (529)
Q Consensus 260 s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~-aDiv~~S~hK~-l~GprgG~i~~~~~~~~~~ 334 (529)
|+||+ ..+.+++.+|++..++++|+|+++. .+......+ .+. . ..+++.|++|+ ++|+|.||+++++
T Consensus 162 p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~-~~~~~~~~~-~~~~~~~vi~~~S~SK~~~~GlRiG~~i~~~------ 233 (356)
T PRK04870 162 PNNPTGNLFDDADVERIIEAAPGLVVVDEAYQ-PFAGDSWLP-RLARFPNLLVMRTVSKLGLAGLRLGYLAGHP------ 233 (356)
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCEEEEECCch-hhcCcchHH-HHhhCCCEEEEecchhhhhHHHhhhhhhCCH------
Confidence 99997 7788888888877789999999853 332211111 111 1 23788999993 3789999999987
Q ss_pred HHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEccCC
Q 009673 335 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRP 413 (529)
Q Consensus 335 ~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~ 413 (529)
++.+++.....+. +.....+.+ ...+++. ...+++..+++.++++.+.+.|++. |+.+..+ .+.++|+.+.
T Consensus 234 ~~i~~~~~~~~~~--~~~~~~q~~-a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~~~~~~~- 305 (356)
T PRK04870 234 AWIAELDKVRPPY--NVNVLTQAT-ALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVTVFPS--AANFILVRVP- 305 (356)
T ss_pred HHHHHHHHccCCC--cCCHHHHHH-HHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCC--CCeEEEEECC-
Confidence 6777766543222 122222222 2223432 1235677788889999999999885 8776543 3456777664
Q ss_pred CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 414 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 414 ~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
+..++.+.|+++||.|...... ....++++||++. +.++++++.+.|+++
T Consensus 306 ---~~~~~~~~l~~~gI~v~~~~~f---~~~~~~~iRis~~-------~~~~~~~l~~al~~~ 355 (356)
T PRK04870 306 ---DAAAVFDGLKTRGVLVKNLSGM---HPLLANCLRVTVG-------TPEENAQFLAALKAA 355 (356)
T ss_pred ---CHHHHHHHHHHCCEEEEECCCC---CCCCCCeEEEeCC-------CHHHHHHHHHHHHHh
Confidence 4567888899999999643221 1224578999964 368999999998765
No 93
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=6.3e-23 Score=214.41 Aligned_cols=317 Identities=17% Similarity=0.150 Sum_probs=215.3
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.|+|..++|+ +|+.+++++..... ...||. . ...++ ++.+++++|++++ +|.+++|+ +
T Consensus 53 ~~i~l~~n~~p~~~~~~v~~a~~~~~~---~~~Yp~------~-~~~~l----r~~ia~~~~~~~~----~I~~t~Ga~~ 114 (380)
T PLN03026 53 DIVKLDANENPYGPPPEVLEALGNMKF---PYVYPD------P-ESRRL----RAALAEDSGLESE----NILVGCGADE 114 (380)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHhhHh---hccCCC------C-CHHHH----HHHHHHHhCcChh----hEEEcCCHHH
Confidence 56889888875 67889998864211 111222 1 12333 4678888998875 56679998 8
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
++..++.++++|||+|++++|.|+.+. ......|. +++.++.+ +++.+|++++++.+...++++|++++
T Consensus 115 ~i~~~~~~~~~~gd~Vlv~~P~y~~y~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~~~~~~v~l~~ 183 (380)
T PLN03026 115 LIDLLMRCVLDPGDKIIDCPPTFGMYV--------FDAAVNGA--EVIKVPRT-PDFSLDVPRIVEAVETHKPKLLFLTS 183 (380)
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHH--------HHHHHcCC--EEEEeecC-CCCCcCHHHHHHHHhccCCcEEEEeC
Confidence 888888899999999999998764321 12234454 66666665 45789999999998433899999999
Q ss_pred CCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccc--cCCCCeEEEeeCCCcch
Q 009673 260 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 333 (529)
Q Consensus 260 s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~ 333 (529)
|+||+ ..+.+++.+|++.. +++++|+++ ..+...+.....+. ...+++.|++|.+ +|+|.||+++++
T Consensus 184 P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY-~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~----- 256 (380)
T PLN03026 184 PNNPDGSIISDDDLLKILELP-ILVVLDEAY-IEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL----- 256 (380)
T ss_pred CCCCCCCCCCHHHHHHHHhcC-CEEEEECcc-hhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCH-----
Confidence 99997 78999999999864 899999995 33332211111111 1248889999986 799999999987
Q ss_pred hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC-cEEecCCCCCceEEEccC
Q 009673 334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG-YKLVSGGSDNHLVLVDLR 412 (529)
Q Consensus 334 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G-~~v~~~gt~~~~~~v~~~ 412 (529)
++.+.+.+...+. +.+...+.+ ...+|+. ...+++..+++.++++.+.+.|++.+ +.+... .++++|+++.
T Consensus 257 -~~i~~l~~~~~~~--~~~~~~q~a-a~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~--~~~f~~~~~~ 328 (380)
T PLN03026 257 -SIIEYLWRAKQPY--NVSVAAEVA-ACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLEPYPS--DANFILCRVT 328 (380)
T ss_pred -HHHHHHHHhcCCC--CCCHHHHHH-HHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCeECCC--CCeEEEEECC
Confidence 6777766544332 222232333 3334532 12346777888889999999998865 444332 3567777764
Q ss_pred CCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 413 PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 413 ~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
. +.+..++.+.|.++||.+... .. ...++++||++. +.++++++.+.|+++
T Consensus 329 ~-~~~~~~~~~~l~~~gI~v~~~----~~-~~~~~~lRis~~-------~~~~~~~l~~al~~~ 379 (380)
T PLN03026 329 S-GRDAKKLKEDLAKMGVMVRHY----NS-KELKGYIRVSVG-------KPEHTDALMEALKQL 379 (380)
T ss_pred C-CCCHHHHHHHHHHCCeEEEEC----CC-CCCCCEEEEecC-------CHHHHHHHHHHHHHh
Confidence 3 356677888888999999643 22 123578999864 368999999998753
No 94
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.92 E-value=1.3e-22 Score=213.42 Aligned_cols=335 Identities=14% Similarity=0.110 Sum_probs=215.6
Q ss_pred hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChH
Q 009673 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS 178 (529)
Q Consensus 102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs 178 (529)
++.|+|..+++. +++.+.+++...+... ..|+. ..| ..++.+.+.+++.+.+|.+ .+.- .+|.+++|+
T Consensus 29 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~--~~Y~~---~~G---~~~lr~~ia~~~~~~~g~~~~~~~-~~i~it~G~ 99 (396)
T PRK09147 29 LPPISLSIGEPKHPTPAFIKDALAANLDGL--ASYPT---TAG---LPALREAIAAWLERRYGLPALDPA-TQVLPVNGS 99 (396)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHhhhh--cCCCC---CCC---CHHHHHHHHHHHHHHhCCCcCCcc-ceEEECCCh
Confidence 367888777753 5788888887665321 12332 112 2355556667888888854 2210 156678888
Q ss_pred -HHHHHHHHhhcCC---CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCc
Q 009673 179 -PANFEVYTAILKP---HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPK 253 (529)
Q Consensus 179 -~A~~~~l~all~p---GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pk 253 (529)
+++..++.++++| ||.|++++|.|.++. ......|. ++++++++++ ++.+|++++++.+.+ ++|
T Consensus 100 ~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~--------~~~~~~g~--~~~~vp~~~~~~~~~d~~~l~~~~~~-~~k 168 (396)
T PRK09147 100 REALFAFAQTVIDRDGPGPLVVCPNPFYQIYE--------GAALLAGA--EPYFLNCDPANNFAPDFDAVPAEVWA-RTQ 168 (396)
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEcCCCccchH--------HHHHhcCC--EEEEeccCccccCccCHHHHHHHHhh-ccE
Confidence 9999999999999 999999999775432 12334554 6777777644 468999999888866 899
Q ss_pred EEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCC--CCC-----c---cc--EEEeccccc-
Q 009673 254 LIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-----Y---CD--VVTTTTHKS- 315 (529)
Q Consensus 254 lIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~-----~---aD--iv~~S~hK~- 315 (529)
+|++++|+||+ .. .+++|.++|++|+++||+|+++ ..+.+.+..+. .+. + .+ +++.|++|.
T Consensus 169 ~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 247 (396)
T PRK09147 169 LLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECY-SEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRS 247 (396)
T ss_pred EEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccc-cccccCCCCCCchhhhhccccCccccccEEEEecccccc
Confidence 99999999997 33 5778888899999999999984 34443321111 010 1 12 888999995
Q ss_pred -ccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC
Q 009673 316 -LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG 394 (529)
Q Consensus 316 -l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G 394 (529)
++|+|.||+++++ ++.+.+.........+.+...+.+++ .++. .....++.++++.++++.+.+.|.+.
T Consensus 248 ~~~GlRiG~~~~~~------~l~~~~~~~~~~~~~~~~~~~q~a~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~- 317 (396)
T PRK09147 248 NVPGLRSGFVAGDA------ALLKKFLLYRTYHGCAMPPAVQAASI-AAWN--DEAHVRENRALYREKFDAVTPILAPV- 317 (396)
T ss_pred CCccceeeeecCCH------HHHHHHHHHhhhcccCCCHHHHHHHH-HHhc--chhHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 5899999999987 67666654321111122222222222 2332 12234667778888888888988774
Q ss_pred cEEecCCCCCceEEEccCCCCCcHHHH-HHhHhcCCeEEcCCCCCCCC---CCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673 395 YKLVSGGSDNHLVLVDLRPMGIDGARV-EKILDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVAIA 470 (529)
Q Consensus 395 ~~v~~~gt~~~~~~v~~~~~~i~~~~~-~~~L~~~GI~v~~~~~Pg~~---~~~~~~~iRig~~~~tt~g~~~~d~~~la 470 (529)
+.+..+ ..+.++|++++ .+..++ ..+|+++||.+.++...+.. .....+++||++. ..++++++..
T Consensus 318 ~~~~~p-~~g~f~~~~~~---~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~------~~~~~l~~~l 387 (396)
T PRK09147 318 LDVQLP-DAGFYLWAKVP---GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALV------APLAECVEAA 387 (396)
T ss_pred cCCCCC-CeeEEEEEECC---CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEec------CCHHHHHHHH
Confidence 444333 23567788875 244555 45557899999544322211 1123578999864 2367888888
Q ss_pred HHHHHHH
Q 009673 471 DFIHEGV 477 (529)
Q Consensus 471 ~~i~~~~ 477 (529)
+.|.+++
T Consensus 388 ~rl~~~~ 394 (396)
T PRK09147 388 ERIVDFC 394 (396)
T ss_pred HHHHHHh
Confidence 7777654
No 95
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.92 E-value=2.4e-23 Score=215.07 Aligned_cols=295 Identities=18% Similarity=0.186 Sum_probs=198.7
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 144 ~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
+...++| +.+++++|.+. .+.++||++|+..++.++ ++|||+|+++.+.|.+... .+...|.
T Consensus 18 ~~~~~~~----~~la~~~~~~~-----~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~--------~~~~~g~ 80 (352)
T cd00616 18 PKVREFE----KAFAEYLGVKY-----AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATAN--------AILLLGA 80 (352)
T ss_pred HHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH--------HHHHcCC
Confidence 3455666 67888999753 355678999999999998 6899999999987654321 2333454
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCC
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF 302 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~ 302 (529)
+++.++++++++.+|++++++.+++ ++++|++.+ .++...|+++|.++|+++|+++|+|++|..|....+. ++
T Consensus 81 --~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~---~~ 153 (352)
T cd00616 81 --TPVFVDIDPDTYNIDPELIEAAITP-RTKAIIPVH-LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGR---KV 153 (352)
T ss_pred --eEEEEecCCCcCCcCHHHHHHhcCc-CCeEEEEEC-CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCE---Ec
Confidence 7777777755788999999999976 899988864 3455789999999999999999999999988764332 11
Q ss_pred C-cccEEEeccc--ccccCCCCeEEEeeCCCcchhHHHhhhcccccCCC-----------CC-CChHHHHHHHHHHHHHh
Q 009673 303 K-YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL-----------QG-GPHNHTIGGLAVCLKHA 367 (529)
Q Consensus 303 ~-~aDiv~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~-----------~g-~p~~~~iaala~al~~~ 367 (529)
. ..|+.++|+| |+++++.||+++++++ ++.+++......+. .+ +.....+.+ +.++..
T Consensus 154 ~~~~d~~~~S~~~~K~~~~~~gg~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-a~~~~~- 226 (352)
T cd00616 154 GTFGDAGAFSFHPTKNLTTGEGGAVVTNDE-----ELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQA-AIGLAQ- 226 (352)
T ss_pred ccCcceeEEcCCCCCCCcccCceEEEECCH-----HHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHH-HHHHHH-
Confidence 1 3678888866 9998888999988763 45444332111110 00 001111111 112221
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCC----CCceEEEccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCC
Q 009673 368 QSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGS----DNHLVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDK 441 (529)
Q Consensus 368 ~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt----~~~~~~v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~ 441 (529)
...+++..++..++++++.+.|.+ .|++++.+.. ..+.+.+.+... +.+.+++.+.|++.||.++....|...
T Consensus 227 -l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~~~~~~ 305 (352)
T cd00616 227 -LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYPPLHH 305 (352)
T ss_pred -HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeecCcccc
Confidence 124567778888999999999988 5888765422 123334444321 457788999999999988755444221
Q ss_pred CC------------C------CCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673 442 SA------------L------VPGGIRIGSPAMTTRGFSEKEFVAIADFIH 474 (529)
Q Consensus 442 ~~------------~------~~~~iRig~~~~tt~g~~~~d~~~la~~i~ 474 (529)
.+ + ..+.|||++... ++++|++++++.|+
T Consensus 306 ~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~----~t~~di~~i~~~l~ 352 (352)
T cd00616 306 QPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPS----LTEEEIDRVIEALR 352 (352)
T ss_pred CHhhhhccCCCcCCChHHHHHHhCeEEccCCCC----CCHHHHHHHHHHhC
Confidence 00 0 126799988754 55999999999873
No 96
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.92 E-value=4.5e-23 Score=215.66 Aligned_cols=322 Identities=18% Similarity=0.184 Sum_probs=209.5
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCCC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~pG 192 (529)
.+++.++++...+.+.+ ++. .+..+++| +.+++++|.+. .|.++||++|+..++.++ ++||
T Consensus 8 ~~~~~~~~v~~~~~~~~--------~~~-g~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~~~l~al~~~~G 69 (380)
T TIGR03588 8 IDQDDIDAVVEVLKSDF--------LTQ-GPTVPAFE----EALAEYVGAKY-----AVAFNSATSALHIACLALGVGPG 69 (380)
T ss_pred CCHHHHHHHHHHHhcCC--------ccC-ChhHHHHH----HHHHHHHCCCe-----EEEEcCHHHHHHHHHHHcCCCCC
Confidence 44555666666654432 111 23456666 67888999875 244578999999999999 8999
Q ss_pred CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCCCCCCCCHH
Q 009673 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGASAYPRDFDYP 269 (529)
Q Consensus 193 D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---~~pklIi~~~s~~p~~~d~~ 269 (529)
|+|++++++|.+.. ..+...|. +++.++++++++.+|++++++.+++ .++++|++.++ ++...|++
T Consensus 70 d~Viv~~~~~~~~~--------~~~~~~G~--~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~~-~G~~~~~~ 138 (380)
T TIGR03588 70 DRVWTTPITFVATA--------NCALYCGA--KVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVDF-AGKSVDMQ 138 (380)
T ss_pred CEEEeCCcchHHHH--------HHHHHcCC--EEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeCC-CCccCCHH
Confidence 99999998765432 12334554 7788888767788999999999982 27898887543 45578999
Q ss_pred HHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccc--ccccCCCCeEEEeeCCCcchhHHHhhhcccccCC
Q 009673 270 RMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG 347 (529)
Q Consensus 270 ~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~ 347 (529)
+|.++|+++|++||+|++|+.|....+.......+.|++++|+| |+++++.||+++++++ ++.++++.....+
T Consensus 139 ~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~-----~~~~~~~~~~~~g 213 (380)
T TIGR03588 139 AIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDE-----ELAERMRLLRSHG 213 (380)
T ss_pred HHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEEEecCCCCcccccCceEEEECCH-----HHHHHHHHHHHCC
Confidence 99999999999999999999986643311111124699999998 8898889999998774 4554433211000
Q ss_pred ---------------------CCC-CChHHHH-HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecC--C
Q 009673 348 ---------------------LQG-GPHNHTI-GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG--G 401 (529)
Q Consensus 348 ---------------------~~g-~p~~~~i-aala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~--g 401 (529)
..| +..+..+ +++ ++.++ ..+++..++.+++++++.+.|.+. ++.+... +
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~--g~~qL--~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~ 289 (380)
T TIGR03588 214 ITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAAL--GLSQL--KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLG 289 (380)
T ss_pred CCCCcccccccccCcceeeeeccccccCccHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCC
Confidence 001 0111122 222 22222 235677788888899999999874 3443322 1
Q ss_pred C--CCceEEEccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCCCC-C--------CC-------CeEEEccCCCccCCCC
Q 009673 402 S--DNHLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSA-L--------VP-------GGIRIGSPAMTTRGFS 462 (529)
Q Consensus 402 t--~~~~~~v~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~-~--------~~-------~~iRig~~~~tt~g~~ 462 (529)
. ..+.+.+.+.. .+.+.+++.+.|.+.||.++..+.|.+..+ + .+ ..|++..+. .++
T Consensus 290 ~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~----~l~ 365 (380)
T TIGR03588 290 SKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHP----ALT 365 (380)
T ss_pred CEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCC----CCC
Confidence 1 11333333332 345778899999999999876554533110 0 01 346665432 467
Q ss_pred HHHHHHHHHHHHHHH
Q 009673 463 EKEFVAIADFIHEGV 477 (529)
Q Consensus 463 ~~d~~~la~~i~~~~ 477 (529)
++|++++++.|++++
T Consensus 366 ~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 366 LEQQQRVVETLRKVL 380 (380)
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999998763
No 97
>PLN02483 serine palmitoyltransferase
Probab=99.92 E-value=1e-22 Score=218.73 Aligned_cols=320 Identities=18% Similarity=0.182 Sum_probs=206.5
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCC
Q 009673 115 SRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD 193 (529)
Q Consensus 115 ~~~V~eal~~~l~~~y~~G~p~~r~-~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD 193 (529)
++++.+++. +|..+..+.|. |+....+.++| +.+++++|.+. .|.+++|+.+|..++.++++|||
T Consensus 121 ~~~~~~ai~-----~~g~~~~~sr~~~g~~~~~~ele----~~lA~~~g~~~-----ai~~~~G~~an~~~i~al~~~Gd 186 (489)
T PLN02483 121 TPRVIESLK-----KYSASTCSSRVDGGTTKLHRELE----ELVARFVGKPA-----AIVFGMGYATNSTIIPALIGKGG 186 (489)
T ss_pred HHHHHHHHH-----HhCCCCCccccccCCcHHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHhCCCCC
Confidence 345555543 35445556664 33355666666 77889999764 35668999999999999999999
Q ss_pred EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc------CC-----cEEEEcCCC-
Q 009673 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF------RP-----KLIIAGASA- 261 (529)
Q Consensus 194 ~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~------~p-----klIi~~~s~- 261 (529)
.|++.++.|.+... .+...|. +++.++.+ |.+++++.+++. ++ +++++..+.
T Consensus 187 ~Vi~d~~~h~s~~~--------~~~~~Ga--~v~~~~~~------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~ 250 (489)
T PLN02483 187 LIISDSLNHNSIVN--------GARGSGA--TIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIY 250 (489)
T ss_pred EEEEcchhhHHHHH--------HHHHcCC--eEEEEeCC------CHHHHHHHHHhhhhccccccccCCceEEEEECCCC
Confidence 99999998866532 2344565 55555432 456665554320 22 555554333
Q ss_pred --CCCCCCHHHHHHHHHHhCCEEEEecccccccccc-c--cc-CCCC--CcccEEEecccccccCCCCeEEEeeCCCcch
Q 009673 262 --YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VV-ADPF--KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLG 333 (529)
Q Consensus 262 --~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~--~~-~~~~--~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~ 333 (529)
.+...++++|.++|++||++|++|++|..|.... + .. ...+ ...||+++|+||++ |+.|||+++++
T Consensus 251 s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~-g~~GG~i~~~~----- 324 (489)
T PLN02483 251 SMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSF-GSCGGYIAGSK----- 324 (489)
T ss_pred CCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhc-ccCceEEEcCH-----
Confidence 2347899999999999999999999997664321 1 00 0111 25789999999998 56789999887
Q ss_pred hHHHhhhcccccCCC-CCCChHHHHHHHHHHHHHhcCc----hHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673 334 VELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSP----EFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (529)
Q Consensus 334 ~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~----~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~ 408 (529)
++.+.+........ .++.+...+++...+|+.+... ...+..+++.++++++.+.|++.|+.+..+ .+++.++
T Consensus 325 -~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~~-~~sp~~~ 402 (489)
T PLN02483 325 -ELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVLGD-NDSPVMP 402 (489)
T ss_pred -HHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcccCC-CCCCEEE
Confidence 67777765322211 2222333444444566644321 235667889999999999999999876643 2233333
Q ss_pred EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
+-+.. ..+...+.+.|.+.||.+.....|. .+...+.+||++.+. .+++|++++++.|++++..
T Consensus 403 l~l~~-~~~~~~~~~~Ll~~GI~v~~~~fp~--~p~~~~~vRi~isa~----~t~edId~~l~~L~~~~~~ 466 (489)
T PLN02483 403 IMLYN-PAKIPAFSRECLKQNVAVVVVGFPA--TPLLLARARICISAS----HSREDLIKALEVISEVGDL 466 (489)
T ss_pred EEECC-HHHHHHHHHHHHHCCcEEeeeCCCC--CCCCCceEEEEeCCC----CCHHHHHHHHHHHHHHHHH
Confidence 32211 1123456666767899996532332 233457899987654 4589999999999998753
No 98
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.92 E-value=1.3e-22 Score=214.00 Aligned_cols=345 Identities=14% Similarity=0.076 Sum_probs=216.9
Q ss_pred hcceeEecCCC------CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC
Q 009673 102 FKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL 175 (529)
Q Consensus 102 ~~~i~L~asen------~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~ 175 (529)
++.|+|..++. .+|+.+.+++...+......+|.. ..|. .++.+...+++.+.+|.+.+. -+|.++
T Consensus 32 ~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~---~~G~---~~lr~aia~~~~~~~g~~~~~--~~I~it 103 (409)
T PLN00143 32 RLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAP---TGGI---LPARRAIADYLSNDLPYQLSP--DDVYLT 103 (409)
T ss_pred CceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCC---CCCC---HHHHHHHHHHHHhhcCCCCCH--hhEEEe
Confidence 36688876654 478889999887765432122321 1122 345555557777766654321 256678
Q ss_pred ChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCc
Q 009673 176 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPK 253 (529)
Q Consensus 176 sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pk 253 (529)
+|+ +++..++.++++|||.|++++|.|.++.. .....|. +++.+++++ +++.+|+++|+++++. +++
T Consensus 104 ~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~ 172 (409)
T PLN00143 104 LGCKHAAEIIIKVLARPEANILLPRPGFPDVET--------YAIFHHL--EIRHFDLLPEKGWEVDLDAVEAIADE-NTI 172 (409)
T ss_pred cChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHH--------HHHHcCC--EEEEEeccCCCCCcCCHHHHHHhccc-CCE
Confidence 888 99999999999999999999998755421 2234454 566666643 3568999999998876 788
Q ss_pred EEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---Cc--ccEEEeccccc--ccCCCC
Q 009673 254 LIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY--CDVVTTTTHKS--LRGPRG 321 (529)
Q Consensus 254 lIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~~--aDiv~~S~hK~--l~Gprg 321 (529)
++++++|+||+ ..+ +++|.++|++||+++|+|++ |..+.+.+....++ .. .-+++.|++|+ ++|+|.
T Consensus 173 ~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~-Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRv 251 (409)
T PLN00143 173 AMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEV-YGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGL 251 (409)
T ss_pred EEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEcc-ccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccce
Confidence 88888899997 444 77888889999999999998 45555443211222 11 12788999998 489999
Q ss_pred eEEEee-CC-CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEE-e
Q 009673 322 GMIFFK-KD-PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL-V 398 (529)
Q Consensus 322 G~i~~~-~~-~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v-~ 398 (529)
||++++ ++ .....+..+.+.....+... .+.. ..+++..+|+......+++..+++.++++.+.+.|.+.+... .
T Consensus 252 G~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~-~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~ 329 (409)
T PLN00143 252 GWLVTCDPSGLLQICEIADSIKKALNPAPF-PPTF-IQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCP 329 (409)
T ss_pred EEEEeeCchhhhhhHHHHHHHHHHHhccCC-CCch-HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999984 32 00000112222222111111 1222 223333344321112457778888888888989998754322 2
Q ss_pred cCCCCCceEEEccCCC---CC-cH-HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673 399 SGGSDNHLVLVDLRPM---GI-DG-ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473 (529)
Q Consensus 399 ~~gt~~~~~~v~~~~~---~i-~~-~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i 473 (529)
.......++|+++... ++ +. +.+.+++.++||.+. ||.... .++++||++. .+++++++..+.|
T Consensus 330 ~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~f~-~~~~iRi~~~------~~~~~l~~al~rl 398 (409)
T PLN00143 330 QKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIIL----PGVTVG-LKNWLRITFA------VEQSSLEDGLGRL 398 (409)
T ss_pred CCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEe----CccccC-CCCeEEEEEc------CCHHHHHHHHHHH
Confidence 2222356788888531 22 33 345677789999994 554321 3578999864 2478888888888
Q ss_pred HHHHHH
Q 009673 474 HEGVEI 479 (529)
Q Consensus 474 ~~~~~~ 479 (529)
.++++.
T Consensus 399 ~~~l~~ 404 (409)
T PLN00143 399 KSFCGR 404 (409)
T ss_pred HHHHHH
Confidence 887753
No 99
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.92 E-value=5.7e-23 Score=212.01 Aligned_cols=314 Identities=17% Similarity=0.160 Sum_probs=213.3
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
..|+|..++|. +|+.+++++...+... .+|+. .. ..++ ++.+++++|++++ +|.+++|+ +
T Consensus 20 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~--~~y~~------~~-~~~l----r~~ia~~~~~~~~----~i~~~~G~~~ 82 (346)
T TIGR01141 20 EVIKLNSNENPFGPPPKAKEALRAEADKL--HRYPD------PD-PAEL----KQALADYYGVDPE----QILLGNGSDE 82 (346)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHhHHHh--hcCCC------CC-HHHH----HHHHHHHhCcChH----HEEEcCCHHH
Confidence 45788777763 6889999998765321 12322 11 1334 3677888898764 45567777 8
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
++..++.+++++||+|++++|.|+.+. ......|. +++.+++++ ++.+|++++++.+.+ ++++|+++.
T Consensus 83 ~l~~~~~~l~~~gd~v~~~~p~y~~~~--------~~~~~~g~--~~~~~~~~~-~~~~d~~~l~~~~~~-~~~~v~l~~ 150 (346)
T TIGR01141 83 IIELLIRAFLEPGDAVLVPPPTYSMYE--------ISAKIHGA--EVVKVPLDE-DGQLDLEDILVAIDD-KPKLVFLCS 150 (346)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCHHHHH--------HHHHHcCC--eEEEeccCC-CCCCCHHHHHHhcCC-CCCEEEEeC
Confidence 888888999999999999998764321 11233454 666777763 478999999998766 899999998
Q ss_pred CCCCC--CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCCC--cccEEEecccccc--cCCCCeEEEeeCCCc
Q 009673 260 SAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPV 331 (529)
Q Consensus 260 s~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l--~GprgG~i~~~~~~~ 331 (529)
++||+ ..+.+++.++|+.+ |+++++|++|. ++...+.....+. ..+++++|+||++ +|+|.||+++++
T Consensus 151 p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--- 226 (346)
T TIGR01141 151 PNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYG-EFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA--- 226 (346)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchh-hhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCH---
Confidence 88887 78999999999887 99999999965 3332110000011 1247789999997 578889999987
Q ss_pred chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEc
Q 009673 332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVD 410 (529)
Q Consensus 332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~ 410 (529)
++.+++.....+. +.+.. ...+...+++.. ..+++..+++.++++.+.+.|.+. |+.+..+ ...+++++
T Consensus 227 ---~~~~~~~~~~~~~--~~~~~-~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~--~g~~~~~~ 296 (346)
T TIGR01141 227 ---EIIDALNKVRAPF--NLSRL-AQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLEVYPS--DANFVLIR 296 (346)
T ss_pred ---HHHHHHHhccCCC--CCCHH-HHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEECCC--cCCEEEEe
Confidence 6777765543222 22222 233323334321 135777888899999999999885 8886543 34667777
Q ss_pred cCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673 411 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473 (529)
Q Consensus 411 ~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i 473 (529)
+.. +.+++.+.|.++||.+.. |......++++|+++. +++|++++++.|
T Consensus 297 ~~~---~~~~~~~~L~~~gI~v~~----g~~f~~~~~~iRls~~-------~~~~i~~~~~~l 345 (346)
T TIGR01141 297 FPR---DADALFEALLEKGIIVRD----LNSYPGLPNCLRITVG-------TREENDRFLAAL 345 (346)
T ss_pred cCC---CHHHHHHHHHHCCeEEEe----CCCcCCCCCeEEEecC-------CHHHHHHHHHHh
Confidence 753 567788888889999954 3321111678999953 478999888776
No 100
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.92 E-value=9.3e-23 Score=219.20 Aligned_cols=342 Identities=14% Similarity=0.115 Sum_probs=213.7
Q ss_pred cceeEecCCCCC-----cHHHHHHHhhhhhcc-CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC----CCCCCCceee
Q 009673 103 KSLELIASENFT-----SRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNV 172 (529)
Q Consensus 103 ~~i~L~asen~~-----~~~V~eal~~~l~~~-y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g----~~~~~~~~~V 172 (529)
..|+|...||.+ ++.+++.....+... -...++....|+......++.+.+.+++.+.+| ++++ +|
T Consensus 47 g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe----~I 122 (496)
T PLN02376 47 GIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE----RV 122 (496)
T ss_pred ceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh----hE
Confidence 458999999976 333333322111110 000123322333333345677667788888877 5554 56
Q ss_pred ecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccc-cccceEEEEEcccCC-CCCCCCHHHHHHHhhh
Q 009673 173 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDE-STGLVDYDMLEKTAIL 249 (529)
Q Consensus 173 ~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~-~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~ 249 (529)
.+++|+ +|+..++.++++|||.|++++|.|+++.. .+. ..|. ++++++++. +++.+|++++++.+..
T Consensus 123 vit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~--------~~~~~~G~--~vv~v~~~~~~~~~~~~~~le~a~~~ 192 (496)
T PLN02376 123 VMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDR--------DLRWRTGV--EIIPVPCSSSDNFKLTVDAADWAYKK 192 (496)
T ss_pred EEccchHHHHHHHHHHhCCCCCEEEECCCCccchHH--------HHHhhCCC--EEEEEeCCCCccCcCCHHHHHHHHHH
Confidence 678888 99999999999999999999998876531 122 2454 677777754 3478999999765421
Q ss_pred -----cCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC---C-C-----c--cc--
Q 009673 250 -----FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---F-K-----Y--CD-- 306 (529)
Q Consensus 250 -----~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~-~-----~--aD-- 306 (529)
.++|+|++++|+||+ ..+ +++|.++|+++|++||+|++| ..+++.+....+ + . . .+
T Consensus 193 a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY-~~~~f~~~~~~si~~l~~~~~~~~~~~~~v 271 (496)
T PLN02376 193 AQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIY-AATVFAGGDFVSVAEVVNDVDISEVNVDLI 271 (496)
T ss_pred HHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCc-cccccCCCCcccHHHhhccccccccCCCeE
Confidence 368989999999997 444 667888899999999999995 444433211111 1 0 0 12
Q ss_pred EEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchH-H----HHHHHH
Q 009673 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-K----VYQNKV 379 (529)
Q Consensus 307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~----~~~~~i 379 (529)
+++.|+||.| +|.|.||++.+++ .+.+.+......+ ..+...+ .+++..|. ...| + +.++++
T Consensus 272 ~vv~S~SK~~glpGlRvG~li~~~~-----~l~~~~~~~~~~~--~vs~~~Q-~a~~~~L~---d~~~~~~~l~~~r~~l 340 (496)
T PLN02376 272 HIVYSLSKDMGLPGFRVGIVYSFND-----SVVSCARKMSSFG--LVSSQTQ-LMLASMLS---DDQFVDNFLMESSRRL 340 (496)
T ss_pred EEEEeccccCCCCcceEEEEEECCH-----HHHHHHHHHhhcC--CCCHHHH-HHHHHHhC---ChhHHHHHHHHHHHHH
Confidence 4578999986 7999999999653 4555443322111 1222222 22222332 2233 3 336667
Q ss_pred HHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCC-----C-cHHHH-HHhHhcCCeEEcCCCCCCCC-CCCCCCeEEE
Q 009673 380 VSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG-----I-DGARV-EKILDMASITLNKNSVPGDK-SALVPGGIRI 451 (529)
Q Consensus 380 ~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~-----i-~~~~~-~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRi 451 (529)
.++++.+.+.|.+.|+.+..+ ....++|++++... . +..++ ..+++++||.+. ||.. ....++++||
T Consensus 341 ~~r~~~l~~~L~~~gi~~~~~-~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~----pGs~F~~~~~g~~Ri 415 (496)
T PLN02376 341 GIRHKVFTTGIKKADIACLTS-NAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVS----PGSSFRCTEPGWFRI 415 (496)
T ss_pred HHHHHHHHHHHHHCCCcccCC-CceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEe----CccccCCCCCCEEEE
Confidence 778888889998888876654 23467888885321 1 11233 345567899995 4443 2224689999
Q ss_pred ccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 452 GSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 452 g~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
++.. +.++++++..+.|.+++...
T Consensus 416 ~fa~-----~~~~~l~~al~rl~~~l~~~ 439 (496)
T PLN02376 416 CFAN-----MDDDTLHVALGRIQDFVSKN 439 (496)
T ss_pred EeeC-----CCHHHHHHHHHHHHHHHHHh
Confidence 9743 45788888888888888643
No 101
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.92 E-value=1.5e-22 Score=212.56 Aligned_cols=333 Identities=17% Similarity=0.133 Sum_probs=212.9
Q ss_pred hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC--CCCceeeecCCh
Q 009673 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE--NKWGVNVQPLSG 177 (529)
Q Consensus 102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~--~~~~~~V~~~sG 177 (529)
+..++|..+++. +|+.+.+++.+.+... ..|+. ..| ..++.+...+++.+.+|.+. + ..-+|.+++|
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~--~~Y~~---~~G---~~~lr~aia~~~~~~~~~~~~~~-~~~~i~it~G 98 (393)
T TIGR03538 28 KPPIALSIGEPKHPTPAFVLEALRENLHGL--STYPT---TKG---LPELRQAIARWLERRFDLPTGVD-PERHVLPVNG 98 (393)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhcc--CCCCC---CCC---CHHHHHHHHHHHHHhhCCcccCC-CCceEEECCC
Confidence 467888877764 6788999998765321 12322 112 23555556677877777541 1 1015677898
Q ss_pred H-HHHHHHHHhhcCCCCE--EEEcCCCCCccccccccccccccccccceEEEEEcccCCCC-CCCCHHHHHHHhhhcCCc
Q 009673 178 S-PANFEVYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPK 253 (529)
Q Consensus 178 s-~A~~~~l~all~pGD~--Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~-~~iD~d~le~~i~~~~pk 253 (529)
+ +++..++.++++|||. |++++|.|.++. ......|. +++.+++++++ +.+|++++++.+.+ ++|
T Consensus 99 a~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k 167 (393)
T TIGR03538 99 TREALFAFAQAVINPGQAPLVVMPNPFYQIYE--------GAALLAGA--EPYFLNCTAENGFLPDFDAVPESVWR-RCQ 167 (393)
T ss_pred cHHHHHHHHHHHcCCCCcceEEecCCCCcchH--------HHHHhcCC--eEEEeeccccCCCCCCHHHHHHHHhh-cce
Confidence 8 9999999999999996 888888765432 12334554 67777776443 68999999998877 899
Q ss_pred EEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccc--cCCCC---C--c-----ccEEEeccccc-
Q 009673 254 LIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV--VADPF---K--Y-----CDVVTTTTHKS- 315 (529)
Q Consensus 254 lIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~--~~~~~---~--~-----aDiv~~S~hK~- 315 (529)
+|++++|+||+ ..+ +++|.++|++||++||+|+++ ..+.+.+. .+..+ . + --+++.|++|.
T Consensus 168 ~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~ 246 (393)
T TIGR03538 168 LLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECY-SELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRS 246 (393)
T ss_pred EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcch-hhcccCCCCCCcCHHHhcccccccccccEEEEecchhhc
Confidence 99999999997 444 788889999999999999984 34433221 11111 0 1 12788999995
Q ss_pred -ccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC
Q 009673 316 -LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG 394 (529)
Q Consensus 316 -l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G 394 (529)
++|+|.||+++++ ++.+++.........+.+...+.+++ .++.. ....++..+++.++++.+.+.|++.
T Consensus 247 ~~~GlRvG~~i~~~------~l~~~~~~~~~~~~~~~~~~~q~~~~-~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~- 316 (393)
T TIGR03538 247 NLPGLRSGFVAGDA------EILKAFLRYRTYHGCAMPIPTQLASI-AAWND--EQHVRENRALYREKFAAVLEILGQV- 316 (393)
T ss_pred CCcccceEEEecCH------HHHHHHHHHHHhhccCcCHHHHHHHH-HHhcC--hHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 4899999999987 67666654322111222233333322 23321 2234667777888888898988774
Q ss_pred cEEecCCCCCceEEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCC---CCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673 395 YKLVSGGSDNHLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVAIA 470 (529)
Q Consensus 395 ~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~---~~~~~~~iRig~~~~tt~g~~~~d~~~la 470 (529)
+.+..+ ..+.++|++++ .+..++.+. ++++||.+.++...+.. .....+++||++.. +++++++..
T Consensus 317 ~~~~~p-~gg~f~~~~~~---~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~------~~~~l~~~l 386 (393)
T TIGR03538 317 LDLELP-DAGFYLWPKVP---GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA------PLEECVEAA 386 (393)
T ss_pred CcccCC-CeeEEEEEECC---CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC------CHHHHHHHH
Confidence 333322 23567788875 245555544 57899999544321110 11235689999642 368888888
Q ss_pred HHHHH
Q 009673 471 DFIHE 475 (529)
Q Consensus 471 ~~i~~ 475 (529)
+.|.+
T Consensus 387 ~~l~~ 391 (393)
T TIGR03538 387 ERIRS 391 (393)
T ss_pred HHHHH
Confidence 77765
No 102
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.7e-22 Score=210.45 Aligned_cols=322 Identities=18% Similarity=0.168 Sum_probs=219.7
Q ss_pred ceeEecCCCC--CcHHHHHHHhhhhhcc--CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673 104 SLELIASENF--TSRAVMEAVGSCLTNK--YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (529)
Q Consensus 104 ~i~L~asen~--~~~~V~eal~~~l~~~--y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs- 178 (529)
.++|..++|+ +|+.+++++...+... ...+||. .....+++.+.+++.+.+|.+.+. .+|.+++|+
T Consensus 28 ~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~-------~g~~~lr~aia~~~~~~~~~~~~~--~~I~it~G~~ 98 (368)
T PRK03317 28 PVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPD-------RDAVALRADLAAYLTAQTGVGLTV--ENVWAANGSN 98 (368)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCC-------CchHHHHHHHHHHhhhhccCCCCh--hhEEECCCHH
Confidence 4788888874 6889999998776421 1123432 113456656667777776654321 367789998
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
+++..++.++++|||.|++++|.|.++.. .....|. ++++++.+ +++.+|++++++++...++|+|+++
T Consensus 99 ~~l~~~~~~~~~~gd~v~v~~P~y~~~~~--------~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~i~l~ 167 (368)
T PRK03317 99 EILQQLLQAFGGPGRTALGFVPSYSMHPI--------IARGTHT--EWVEGPRA-ADFTLDVDAAVAAIAEHRPDVVFLT 167 (368)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHhcCC--eeEEcccC-CCCCCCHHHHHHHHhccCCCEEEEe
Confidence 89999999999999999999998754421 2223343 66666654 4578999999999876588999988
Q ss_pred CCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC----ccc-EEEecccccc--cCCCCeEEEeeCC
Q 009673 259 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKKD 329 (529)
Q Consensus 259 ~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~aD-iv~~S~hK~l--~GprgG~i~~~~~ 329 (529)
.|+||+ ..+.+++.++++.++++||+|++|. ++...+. +.... ..+ +++.|++|.+ +|.|.||+++++
T Consensus 168 ~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~-~~~~~~~-~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~- 244 (368)
T PRK03317 168 SPNNPTGTALPLDDVEAILDAAPGIVVVDEAYA-EFRRSGT-PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAP- 244 (368)
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCceEEEeCCch-hhcccCC-cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCH-
Confidence 999987 7899999999999999999999964 3332221 11111 123 6778999987 588999999987
Q ss_pred CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEE
Q 009673 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 409 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v 409 (529)
++.+.+.....+. +.+.. ..++...+++.. ..+.+..+++.++++.+.+.|++.|+.+..+. .+++.|.
T Consensus 245 -----~~~~~l~~~~~~~--~~s~~-~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~ 313 (368)
T PRK03317 245 -----AVVDALRLVRLPY--HLSAV-TQAAARAALRHA--DELLASVAALRAERDRVVAWLRELGLRVAPSD-ANFVLFG 313 (368)
T ss_pred -----HHHHHHHhcCCCC--CCCHH-HHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHHHHHCCCEeCCCC-CcEEEEe
Confidence 6777776543222 22222 222333345432 24455667778888889999988888766532 2333333
Q ss_pred ccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 410 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 410 ~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
++. +..++.+.|.++||.+... . .++++||++. ++++++++.+.+++++.
T Consensus 314 ~~~----~~~~~~~~l~~~Gv~v~~~----~----~~~~iRi~~~-------~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 314 RFA----DRHAVWQGLLDRGVLIRDV----G----IPGWLRVTIG-------TPEENDAFLAALAEVLA 363 (368)
T ss_pred ccC----CHHHHHHHHHHCCEEEEeC----C----CCCeEEEecC-------CHHHHHHHHHHHHHHHH
Confidence 442 4567888888899999532 1 2478999963 36899999999988764
No 103
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.91 E-value=2.8e-22 Score=211.23 Aligned_cols=335 Identities=14% Similarity=0.056 Sum_probs=219.0
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.++|..+.+. +++.+.+++...+.... .+|+. .....++++.+.+++++.+|.+.+. .+|.+++|+ +
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~ia~~l~~~~g~~~~~--~~i~~t~G~~~ 104 (402)
T PRK06107 34 SIVDLTVGEPDFDTPDHIKQAAVAAIERGE-TKYTL------VNGTPALRKAIIAKLERRNGLHYAD--NEITVGGGAKQ 104 (402)
T ss_pred CEEEcCCCCCCCCCCHHHHHHHHHHHHcCC-CCCCC------CCCCHHHHHHHHHHHHHhcCCCCCh--hhEEEeCCHHH
Confidence 45788776653 46888898887775321 12322 1223355556668888888886432 367778987 9
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
|+..++.++++|||+|++++|.|.++.. .+...+. .++.++++. +++.+|++++++.+.+ ++++|+++
T Consensus 105 al~~~~~~~~~~gd~vl~~~p~y~~y~~--------~~~~~~~--~~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~ 173 (402)
T PRK06107 105 AIFLALMATLEAGDEVIIPAPYWVSYPD--------MVLANDG--TPVIVACPEEQGFKLTPEALEAAITP-RTRWLILN 173 (402)
T ss_pred HHHHHHHHhcCCCCEEEEecCCCcCHHH--------HHHHcCC--EEEEecCCcccCCCCCHHHHHhhcCc-CceEEEEE
Confidence 9999999999999999999987654421 2223333 455666643 3467999999999876 88999888
Q ss_pred CCCCCC--CC---CHHHHHHHHHHh-CCEEEEecccccccccccc-cCCCC---Cc---ccEEEecccccc--cCCCCeE
Q 009673 259 ASAYPR--DF---DYPRMRQIADAV-GALLMMDMAHISGLVAASV-VADPF---KY---CDVVTTTTHKSL--RGPRGGM 323 (529)
Q Consensus 259 ~s~~p~--~~---d~~~i~~ia~~~-g~~livD~ah~~Gli~~~~-~~~~~---~~---aDiv~~S~hK~l--~GprgG~ 323 (529)
+|+||+ .. ++++|+++|+++ |+++|+|+++. .+.+.+. .+... ++ --++++|+||.+ +|.|.||
T Consensus 174 ~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~-~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~ 252 (402)
T PRK06107 174 APSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYD-HIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGY 252 (402)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhcc-ccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceee
Confidence 888887 34 467788889998 99999999853 4433221 11111 11 237789999986 7889999
Q ss_pred EEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCC
Q 009673 324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS 402 (529)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt 402 (529)
+++++ ++.+.+......... +++....+++..+|.. .....++..+.+.++++.+.+.|++. |+.+..+ .
T Consensus 253 ~~~~~------~~~~~~~~~~~~~~~-~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p-~ 323 (402)
T PRK06107 253 AAGPA------DLIAAINKLQSQSSS-CPSSISQAAAAAALNG-DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVP-D 323 (402)
T ss_pred eecCH------HHHHHHHHHHHhccc-CCChHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC-C
Confidence 99987 677666543321112 2233333333334431 12233667778888899999999874 7766543 2
Q ss_pred CCceEEEccCC-------CCC---cHHH-HHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673 403 DNHLVLVDLRP-------MGI---DGAR-VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 471 (529)
Q Consensus 403 ~~~~~~v~~~~-------~~i---~~~~-~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~ 471 (529)
.+.++|++++. .+. +..+ +..+++++||.+. ||.... .++++||++. .+++++++..+
T Consensus 324 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~----pg~~Fg-~~~~iRis~~------~~~e~l~~~l~ 392 (402)
T PRK06107 324 GAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVV----QGTAYG-LSPYFRLSIA------TSLETLEEACA 392 (402)
T ss_pred cceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEe----CccccC-CCCeEEEEeC------CCHHHHHHHHH
Confidence 35666777631 121 3444 5567788999994 554321 2578999974 24789888888
Q ss_pred HHHHHHH
Q 009673 472 FIHEGVE 478 (529)
Q Consensus 472 ~i~~~~~ 478 (529)
.|.+++.
T Consensus 393 ~l~~~l~ 399 (402)
T PRK06107 393 RIERAVA 399 (402)
T ss_pred HHHHHHH
Confidence 8887764
No 104
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.4e-22 Score=209.72 Aligned_cols=317 Identities=20% Similarity=0.190 Sum_probs=215.1
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.|+|..++|+ +++.+++++...+.+.. ..||. .. ..++ ++.++++++++++ +|.+++|+ +
T Consensus 25 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-~~y~~------~~-~~~l----r~aia~~~~~~~~----~I~it~G~~~ 88 (353)
T PRK05387 25 KLIKLNTNENPYPPSPKVLEAIRAALGDDL-RLYPD------PN-ADAL----RQAIAAYYGLDPE----QVFVGNGSDE 88 (353)
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHhhhhh-hcCCC------Cc-HHHH----HHHHHHHhCCCHH----HEEEcCCHHH
Confidence 56888888875 47889999987654322 12332 11 1233 4677788888875 56678988 9
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
++..++.++++|||+|++++|.|..+. ......|. +++.++++ +++.+|++++++ +.++|++++
T Consensus 89 al~~~~~~l~~~gd~vlv~~P~y~~~~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~-----~~~~v~~~~ 152 (353)
T PRK05387 89 VLAHAFLAFFNHDRPLLFPDITYSFYP--------VYAGLYGI--PYEEIPLD-DDFSIDVEDYLR-----PNGGIIFPN 152 (353)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCHHHHH--------HHHHHcCC--EEEEeecC-CCCCCCHHHHHh-----cCCEEEEeC
Confidence 999999999999999999998764321 12234454 66666665 457899999863 357888888
Q ss_pred CCCCC--CCCHHHHHHHHHHh-CCEEEEecccccccccccccCCCC-C--cccEEEecccccc--cCCCCeEEEeeCCCc
Q 009673 260 SAYPR--DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPF-K--YCDVVTTTTHKSL--RGPRGGMIFFKKDPV 331 (529)
Q Consensus 260 s~~p~--~~d~~~i~~ia~~~-g~~livD~ah~~Gli~~~~~~~~~-~--~aDiv~~S~hK~l--~GprgG~i~~~~~~~ 331 (529)
|+||+ ..+.+++.+|++.+ |+++|+|++|. .+. +....++ . ...++++|++|++ +|+|.||+++++
T Consensus 153 P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~-~~~--~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--- 226 (353)
T PRK05387 153 PNAPTGIALPLAEIERILAANPDSVVVIDEAYV-DFG--GESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP--- 226 (353)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCcEEEEeCccc-ccC--CcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCH---
Confidence 99997 77899999999876 99999999863 221 1111111 1 2348899999975 789999999876
Q ss_pred chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEcc
Q 009673 332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 411 (529)
Q Consensus 332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~ 411 (529)
++.+.+..........+.+.....++..++.. ...+++..+++.++++.+.+.|++.|+.+..+ ..+++|+.+
T Consensus 227 ---~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~~~~~ 299 (353)
T PRK05387 227 ---ELIEALNRVKNSFNSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEALGFEVLPS--KANFVFARH 299 (353)
T ss_pred ---HHHHHHHHhhccCCCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeECCC--cCcEEEEEC
Confidence 67776654322111112223333333334431 12346778888899999999999888876543 245666665
Q ss_pred CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 412 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 412 ~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
. +.+..++.+.|.++||.+... +. +..++++||++. ++++++++.+.|++++.
T Consensus 300 ~--~~~~~~~~~~l~~~gi~v~~~---~~--~~~~~~iRis~~-------~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 300 P--SHDAAELAAKLRERGIIVRHF---NK--PRIDQFLRITIG-------TDEEMEALVDALKEILA 352 (353)
T ss_pred C--CCCHHHHHHHHHHCCEEEEEC---CC--CCCCCeEEEEeC-------CHHHHHHHHHHHHHHhh
Confidence 4 356677888888999999532 11 123578999863 36899999999988764
No 105
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=2.7e-22 Score=208.96 Aligned_cols=320 Identities=17% Similarity=0.109 Sum_probs=215.5
Q ss_pred ceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HH
Q 009673 104 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 180 (529)
Q Consensus 104 ~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A 180 (529)
.++|..+++. +++.+++++...+...+ +|+. .. ..+++ +.++++++++++ +|.+++|+ ++
T Consensus 34 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~~--~Y~~------~~-~~~Lr----~~ia~~~~~~~~----~I~it~G~~~~ 96 (369)
T PRK08153 34 RARIGANESGFGPSPSVIAAMREAAAEIW--KYGD------PE-NHDLR----HALAAHHGVAPE----NIMVGEGIDGL 96 (369)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHHHhh--cCCC------Cc-cHHHH----HHHHHHhCCCHH----HEEEcCCHHHH
Confidence 3688888874 58899999886653211 2332 11 23444 566777888774 56779998 77
Q ss_pred HHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 009673 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (529)
Q Consensus 181 ~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s 260 (529)
+..++.++++|||.|++.+|.|.+... .+...|. +++.++++. ..+|++++++.+...++++|+++.|
T Consensus 97 l~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~--~~~~vp~~~--~~~~~~~l~~~~~~~~~~~i~l~~P 164 (369)
T PRK08153 97 LGLIVRLYVEPGDPVVTSLGAYPTFNY--------HVAGFGG--RLVTVPYRD--DREDLDALLDAARRENAPLVYLANP 164 (369)
T ss_pred HHHHHHHhcCCCCEEEECCCcchHHHH--------HHHHcCC--eEEEeeCCC--CCCCHHHHHHHhcccCCcEEEEeCC
Confidence 778888889999999999987754421 1233454 556666642 3689999987776558999999889
Q ss_pred CCCC--CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCCC--c-ccEEEecccccc--cCCCCeEEEeeCCCc
Q 009673 261 AYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPV 331 (529)
Q Consensus 261 ~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~--~-aDiv~~S~hK~l--~GprgG~i~~~~~~~ 331 (529)
+||+ ..+.+++.++++.. |++||+|+++ ..+...+.. .++. . -.+++.|++|++ +|+|.||+++++
T Consensus 165 ~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y-~~~~~~~~~-~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~--- 239 (369)
T PRK08153 165 DNPMGSWHPAADIVAFIEALPETTLLVLDEAY-CETAPAGAA-PPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAP--- 239 (369)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCcEEEEeCch-hhhcCcccc-hhhhhcCCCEEEEecchHhccCcchheeeeecCH---
Confidence 9987 67777777776644 8999999985 344433211 1221 1 237889999987 689999999987
Q ss_pred chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEcc
Q 009673 332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 411 (529)
Q Consensus 332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~ 411 (529)
++.+.+.....+ .+. +....+++..+++. ....++..+.+.++++.+.+.|++.|+.+.+. ..+++++++
T Consensus 240 ---~~~~~l~~~~~~--~~~-s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~p~--~~~f~~~~~ 309 (369)
T PRK08153 240 ---GTIKAFDKVRNH--FGM-NRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARANGLTPLPS--ATNFVAIDC 309 (369)
T ss_pred ---HHHHHHHHhhcC--CCC-CHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC--cCcEEEEEC
Confidence 676666543322 222 33333333344531 12236677778888888999998888865532 356677777
Q ss_pred CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 412 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 412 ~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
.........+.+.|.++||.+.. |+.. ..++++||++. +++|++++++.|++++..
T Consensus 310 ~~~~~~a~~l~~~l~~~Gi~v~~---p~~~--~~~~~iRis~~-------~~~~~~~~~~al~~~~~~ 365 (369)
T PRK08153 310 GRDGAFARAVLDGLIARDIFVRM---PGVA--PLDRCIRVSCG-------PDEELDLFAEALPEALEA 365 (369)
T ss_pred CCCcccHHHHHHHHHHCCeEEee---CCCC--CCCCeEEEecC-------CHHHHHHHHHHHHHHHHH
Confidence 43333456777778889999842 3321 13568999964 379999999999988764
No 106
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.91 E-value=2.7e-22 Score=206.05 Aligned_cols=316 Identities=22% Similarity=0.239 Sum_probs=225.1
Q ss_pred cceeEecCCCCC--cHHHHHHHhhhhh--ccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC-CCCCCCceeeecCCh
Q 009673 103 KSLELIASENFT--SRAVMEAVGSCLT--NKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~asen~~--~~~V~eal~~~l~--~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g-~~~~~~~~~V~~~sG 177 (529)
..+.|.++||+. |+.+++++...+. ++| |.. ...+++ +.+++.+| .+.+ +|.++.|
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~~~~rY----Pd~-------~~~~l~----~a~a~~~~~~~~~----~V~~gnG 83 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALDKLNRY----PDP-------DYRELR----AALAEYYGVVDPE----NVLVGNG 83 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHHhhccC----CCC-------cHHHHH----HHHHHHhCCCCcc----eEEEcCC
Confidence 358899999974 5888888876653 333 331 122333 66788889 6654 6777999
Q ss_pred H-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673 178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (529)
Q Consensus 178 s-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi 256 (529)
+ +.+..++.+++.|||+|+++.|+|+.+- ......|+ +++.+++++ +.+|++.+.+.+.+ ++++|+
T Consensus 84 sde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~--------~~a~~~g~--~~~~v~~~~--~~~d~~~~~~~~~~-~~~lv~ 150 (356)
T COG0079 84 SDELIELLVRAFVEPGDTVLIPEPTFSMYE--------IAAQLAGA--EVVKVPLKE--FRLDLDAILAAIRD-KTKLVF 150 (356)
T ss_pred hHHHHHHHHHHhhcCCCEEEEcCCChHHHH--------HHHHhcCC--eEEEecccc--cccCHHHHHHhhhc-CCCEEE
Confidence 9 8888999999999999999999875442 12334554 667776663 89999999999988 899999
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCCCccc--EEEecccccc--cCCCCeEEEeeC
Q 009673 257 AGASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFKYCD--VVTTTTHKSL--RGPRGGMIFFKK 328 (529)
Q Consensus 257 ~~~s~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~~aD--iv~~S~hK~l--~GprgG~i~~~~ 328 (529)
+++||||+ ..+.++|.+++... +.+|++|+| |.......... .+.+.+ +++-|++|.+ +|.|.||+++++
T Consensus 151 i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEA-Y~eF~~~~~~~-l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~ 228 (356)
T COG0079 151 LCNPNNPTGTLLPREELRALLEALPEGGLVVIDEA-YIEFSPESSLE-LLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP 228 (356)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCc-hhhcCCchhhh-hccCCCCEEEEEecHHhhhcchhceeeccCCH
Confidence 99999998 66777777777654 889999999 44433311110 011223 7889999974 899999999988
Q ss_pred CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcE-EecCCCCCceE
Q 009673 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK-LVSGGSDNHLV 407 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~-v~~~gt~~~~~ 407 (529)
++.+.+++...|+...+ ...++..++++.. +..++..+++...++++.+.|++.|+. +.. +..+++
T Consensus 229 ------~~i~~l~~vr~p~~v~~---~a~~aa~aal~~~--~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~p--S~aNFv 295 (356)
T COG0079 229 ------ELIAALNKVRPPFNVSS---PALAAAIAALRDA--DYLEESVERIREERERLYAALKALGLFGVFP--SQANFV 295 (356)
T ss_pred ------HHHHHHHHhcCCCCCCH---HHHHHHHHHcccH--HHHHHHHHHHHHHHHHHHHHHHhCCCCeecC--CCCcEE
Confidence 89999988776653322 2222222334321 334788888999999999999998754 444 236778
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
++++.. +. ...+.+.|.++||.++...-+ +..++++||++. +++|.+++.++|.++++
T Consensus 296 lv~~~~-~~-~~~l~~~L~~~giivR~~~~~----~~~~~~lRitvg-------t~een~~ll~AL~~~~~ 353 (356)
T COG0079 296 LVRVPD-AE-AAALAEALLKKGILVRDCSSV----GLLPGYLRITVG-------TPEENDRLLAALREVLK 353 (356)
T ss_pred EEECCC-cc-HHHHHHHHHHCCEEEEeCCCC----CCCCCeEEEEeC-------CHHHHHHHHHHHHHHHh
Confidence 887754 22 457888898999999864211 234679999863 36888999999988775
No 107
>PRK08175 aminotransferase; Validated
Probab=99.91 E-value=9.1e-22 Score=206.85 Aligned_cols=338 Identities=15% Similarity=0.105 Sum_probs=213.3
Q ss_pred cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
..++|..++. .+++.+.+++...+.+....+|+. .....++++...+++.+.+|...+. ..+|.+++|+ +
T Consensus 30 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~g~~~~~-~~~i~~t~G~~~ 102 (395)
T PRK08175 30 DIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYST------SRGIPRLRRAISRWYQDRYDVDIDP-ESEAIVTIGSKE 102 (395)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCC-CCcEEEccCcHH
Confidence 4566655442 246667777766553322222322 1223456666667777777764321 0146678988 8
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEE
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIA 257 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~ 257 (529)
++..++.++++|||+|++++|.|..+.. .....|. +++.++++++ ..+.++++++++.. ++++|++
T Consensus 103 ~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~--~~~~~~l~~~l~~~~~~~~~v~i 170 (395)
T PRK08175 103 GLAHLMLATLDHGDTVLVPNPSYPIHIY--------GAVIAGA--QVRSVPLVEG--VDFFNELERAIRESYPKPKMMIL 170 (395)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCC--eEEEEecccC--CCcHHHHHHHHhhccCCceEEEE
Confidence 8888888999999999999998765421 1233454 6667766643 23578888887642 6899999
Q ss_pred cCCCCCC--CCCH---HHHHHHHHHhCCEEEEecccccccccccccCCC---CC-ccc--EEEecccccc--cCCCCeEE
Q 009673 258 GASAYPR--DFDY---PRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK-YCD--VVTTTTHKSL--RGPRGGMI 324 (529)
Q Consensus 258 ~~s~~p~--~~d~---~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~-~aD--iv~~S~hK~l--~GprgG~i 324 (529)
+.|+||+ ..+. ++|.++|+++|+++|+|+++. .+.+.+....+ +. ..| +++.|++|++ +|.|.||+
T Consensus 171 ~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~-~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~ 249 (395)
T PRK08175 171 GFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYA-DIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFM 249 (395)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchH-hhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheee
Confidence 8888887 4554 788899999999999999853 44433221111 11 123 6779999997 78899999
Q ss_pred EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCC
Q 009673 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 404 (529)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~ 404 (529)
+.++ ++.+++.+.......+.+...+.++ ..++... ....+..++.+.++++.+.+.|++.|+.+..+ ..+
T Consensus 250 ~~~~------~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p-~~g 320 (395)
T PRK08175 250 VGNP------ELVSALARIKSYHDYGTFTPLQVAA-IAALEGD-QQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMP-KAS 320 (395)
T ss_pred eCCH------HHHHHHHHHHhhcccCCCcHHHHHH-HHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC-CEE
Confidence 9887 6777665432111122223333332 2344321 12346667778888999999999888876543 235
Q ss_pred ceEEEccCCC--CCcHHHHH-HhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 405 HLVLVDLRPM--GIDGARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 405 ~~~~v~~~~~--~i~~~~~~-~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.++|+++... ..+..++. ++++++||.|..+... +...++++||++. ..++.+++..+.|.+++.
T Consensus 321 ~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f---~~~~~~~lRis~~------~~~~~~~~al~~l~~~l~ 388 (395)
T PRK08175 321 MYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGF---GDYGDTHVRFALI------ENRDRIRQAIRGIKAMFR 388 (395)
T ss_pred EEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhh---CcCCCCeEEEEeC------CCHHHHHHHHHHHHHHHH
Confidence 6778887532 12345555 4567899999543222 1223568999863 246888888888777764
No 108
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.91 E-value=1e-22 Score=209.22 Aligned_cols=318 Identities=18% Similarity=0.147 Sum_probs=200.7
Q ss_pred cCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH
Q 009673 109 ASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (529)
Q Consensus 109 asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~ 186 (529)
.+||+ +++.+++++...+.. + . + |+..+...+++ +++++++| +. ..+.+.+|++|+..++.
T Consensus 3 ~~~~~~~~~~~v~~a~~~~~~~-~----~--~-~~~~~~~~~l~----~~~a~~~g-~~----~~~~~~~gt~a~~~~~~ 65 (338)
T cd06502 3 RSDTVTGPTPEMLEAMAAANVG-D----D--V-YGEDPTTAKLE----ARAAELFG-KE----AALFVPSGTAANQLALA 65 (338)
T ss_pred ccccCCCCCHHHHHHHHhcccC-C----c--c-cCCCHHHHHHH----HHHHHHhC-CC----eEEEecCchHHHHHHHH
Confidence 36665 588999999765421 1 1 1 22233344444 78889999 33 24666888899999999
Q ss_pred hhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh------cCCcEEEEcCC
Q 009673 187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL------FRPKLIIAGAS 260 (529)
Q Consensus 187 all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~------~~pklIi~~~s 260 (529)
++++|||+|++.++.|.++..... .....|. +++.++.+ ++.+|+++|++++++ .++++|+++++
T Consensus 66 ~l~~~gd~v~~~~~~~~~~~~~~~-----~~~~~g~--~~~~v~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p 136 (338)
T cd06502 66 AHTQPGGSVICHETAHIYTDEAGA-----PEFLSGV--KLLPVPGE--NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENT 136 (338)
T ss_pred HhcCCCCeEEEecCcceeeecCCc-----HHHHcCc--eEEeecCC--CCcCCHHHHHHHhhccCCCcCCcceEEEEEee
Confidence 999999999999887754421110 1123454 56666654 368999999999874 26889998877
Q ss_pred CCCC----CCCHHHHHHHHHHhCCEEEEecccccccc-cccccCCCC-CcccEEEecccccccCCCCeEEEeeCCCcchh
Q 009673 261 AYPR----DFDYPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGV 334 (529)
Q Consensus 261 ~~p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli-~~~~~~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~ 334 (529)
+|++ ..++++|.++|+++|+++++|+||..+.. ..+...... .++|+++.|+||+++.|.|++++.++
T Consensus 137 ~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~------ 210 (338)
T cd06502 137 TEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNR------ 210 (338)
T ss_pred cCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCH------
Confidence 7765 24678899999999999999999764432 112110111 25789999999999767666566666
Q ss_pred HHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC
Q 009673 335 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM 414 (529)
Q Consensus 335 ~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~ 414 (529)
++.+.+.....+ ..++...+.+.+.+ ++..+....+.++.+++.++++++.+.|++.|+.+.. ...+++++.+...
T Consensus 211 ~~~~~~~~~~~~-~~~~~~~~~~~~~a-~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~v~~~~~ 286 (338)
T cd06502 211 DFIARARRRRKQ-AGGGMRQSGFLAAA-GLAALENDLWLRRLRHDHEMARRLAEALEELGGLESE--VQTNIVLLDPVEA 286 (338)
T ss_pred HHHHHHHHHHHH-hCCChhhHHHHHHH-HHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCCCccc--ccCCeEEEecCCc
Confidence 666666543211 11222222222211 2222223346677788899999999999988875433 2345555554321
Q ss_pred CCcHHHHHHhHh---cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 415 GIDGARVEKILD---MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 415 ~i~~~~~~~~L~---~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
......+.+.|. +.||.+... ..+.|||+.+..+ +++|++++++.+++
T Consensus 287 ~~~~~~l~~~l~~~~~~gi~~~~~---------~~~~lRi~~~~~~----~~~~i~~~~~~l~~ 337 (338)
T cd06502 287 NAVFVELSKEAIERRGEGVLFYAW---------GEGGVRFVTHWDT----TEEDVDELLSALKA 337 (338)
T ss_pred cHHHHHHHHHHHHhhhCCEEEEec---------CCCeEEEEeecCC----CHHHHHHHHHHHhc
Confidence 111112222222 579888432 1268999887554 47999999998864
No 109
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.91 E-value=1.9e-22 Score=213.11 Aligned_cols=320 Identities=18% Similarity=0.180 Sum_probs=210.0
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc--CC
Q 009673 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (529)
Q Consensus 115 ~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--~p 191 (529)
+|.|++++...+ .+|..+..+.|.+.|. +...++| +++++++|.+. .|.++||++||..++.++. .|
T Consensus 62 ~p~v~~a~~~~~-~~~~~~~~~s~~~~~~~~~~~~Le----~~la~~~g~~~-----~i~~~sG~~a~~~~i~~l~~~~~ 131 (410)
T PRK13392 62 HPDVIGAMVDAL-DRYGAGAGGTRNISGTSHPHVLLE----RELADLHGKES-----ALLFTSGYVSNDAALSTLGKLLP 131 (410)
T ss_pred CHHHHHHHHHHH-HHcCCCCchhhhcccChHHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHHHHHHHHhcCCC
Confidence 789999998766 4565555555544433 3445555 77889999753 4667999999998888775 48
Q ss_pred CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCCCCC--CC
Q 009673 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGASAYPR--DF 266 (529)
Q Consensus 192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---~~pklIi~~~s~~p~--~~ 266 (529)
||.|+...+.|++.+. .+...|. ++..++. .|.+++++.+.. .++++|++++++||+ ..
T Consensus 132 g~~vi~~~~~h~s~~~--------~~~~~g~--~~~~~~~------~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~ 195 (410)
T PRK13392 132 GCVILSDALNHASMIE--------GIRRSGA--EKQVFRH------NDLADLEEQLASVDPDRPKLIAFESVYSMDGDIA 195 (410)
T ss_pred CCEEEEehhhhHHHHH--------HHHHcCC--eEEEEeC------CCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccc
Confidence 9988877666654321 2233454 3333321 245555555542 368899999888776 78
Q ss_pred CHHHHHHHHHHhCCEEEEecccccccccc-c--cc--CCCCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhc
Q 009673 267 DYPRMRQIADAVGALLMMDMAHISGLVAA-S--VV--ADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN 341 (529)
Q Consensus 267 d~~~i~~ia~~~g~~livD~ah~~Gli~~-~--~~--~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~ 341 (529)
|+++|.++|+++|+++++|++|..|.... + .. ....+..|++++|++|++++ .|||+++++ ++.+.++
T Consensus 196 ~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~-~GG~~~~~~------~~~~~l~ 268 (410)
T PRK13392 196 PIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGC-LGGYIAASA------DLIDFVR 268 (410)
T ss_pred cHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhc-ccchhhcCH------HHHHHHH
Confidence 99999999999999999999998776422 1 10 01112468999999999854 468998876 6666555
Q ss_pred ccccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHH
Q 009673 342 NAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGAR 420 (529)
Q Consensus 342 ~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~ 420 (529)
+...+.. ..+.+....+++..+|+.... .....+++.++++++.+.|++.|+++..+ +++++.+.+. ...+..+
T Consensus 269 ~~~~~~~~s~~~~~~~~~a~~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~~i~~~-~~~~~~~ 343 (410)
T PRK13392 269 SFAPGFIFTTALPPAVAAGATAAIRHLKT--SQTERDAHQDRVAALKAKLNANGIPVMPS--PSHIVPVMVG-DPTLCKA 343 (410)
T ss_pred HhCcchhccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCCC--CCCEEEEEeC-CHHHHHH
Confidence 4332221 222222344555567776533 23456778888999999999889887643 3444444342 1112345
Q ss_pred HHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 421 VEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 421 ~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+.+.| +++||.+.....|+- +.+.++|||+.+... +++|++++++.|.++++
T Consensus 344 ~~~~L~~~~GI~v~~~~~p~~--~~~~~~lRis~~~~~----t~edid~l~~aL~~~~~ 396 (410)
T PRK13392 344 ISDRLMSEHGIYIQPINYPTV--PRGTERLRITPTPLH----DDEDIDALVAALVAIWD 396 (410)
T ss_pred HHHHHHHhCCEEEeeeCCCCC--CCCCceEEEEECCCC----CHHHHHHHHHHHHHHHH
Confidence 66666 678999976433321 223468999987654 58999999999988865
No 110
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.91 E-value=1.2e-22 Score=216.04 Aligned_cols=275 Identities=15% Similarity=0.157 Sum_probs=189.1
Q ss_pred eeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh
Q 009673 171 NVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL 249 (529)
Q Consensus 171 ~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~ 249 (529)
+|.+++|+ +|+..++.++++|||.|++.+|.|.++.. .+...|. ++++++++. + .+|+|+++++++.
T Consensus 143 ~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~-~-g~~~~~l~~~~~~ 210 (431)
T PRK15481 143 EIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSIN--------MLRYAGF--SASPVSVDA-E-GMQPEKLERALAQ 210 (431)
T ss_pred eEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHcCC--eEEeeccCC-C-CCCHHHHHHHHhc
Confidence 56778988 99999999999999999999998765431 3344565 677777763 2 4899999999876
Q ss_pred cCCcEEEEc-CCCCCC--CCCH---HHHHHHHHHh-CCEEEEecccccccccccccCCCCC---cccEEEecccccc-cC
Q 009673 250 FRPKLIIAG-ASAYPR--DFDY---PRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL-RG 318 (529)
Q Consensus 250 ~~pklIi~~-~s~~p~--~~d~---~~i~~ia~~~-g~~livD~ah~~Gli~~~~~~~~~~---~aDiv~~S~hK~l-~G 318 (529)
++|+++++ +|+||+ ..+. ++|.++|+++ +++||+|+++ ..+...+ ...++. .--+++.|+||++ +|
T Consensus 211 -~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y-~~~~~~~-~~~~~~~~~~~vi~~~SfSK~~~~G 287 (431)
T PRK15481 211 -GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHF-ALLSSSP-YHSVIPQTTQRWALIRSVSKALGPD 287 (431)
T ss_pred -CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCch-hhhccCC-CCCCCcCCCCCEEEEeeeccccCCC
Confidence 89998887 899997 5554 4899999999 9999999984 4443322 122222 1238889999987 78
Q ss_pred CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHHHhcCcEE
Q 009673 319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRALASRLVELGYKL 397 (529)
Q Consensus 319 prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-~~~~~~~~~~i~~~a~~l~~~L~~~G~~v 397 (529)
+|.||++.++ ++.+.+.........+.+.. ...+++.+|+.-. ....++.++.+.++++.+.+.|++.|+.+
T Consensus 288 lRiG~~i~~~------~~~~~~~~~~~~~~~~~s~~-~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~ 360 (431)
T PRK15481 288 LRLAFVASDS------ATSARLRLRLNSGTQWVSHL-LQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAI 360 (431)
T ss_pred ceeEEEeCCH------HHHHHHHHHHhccccCCCHH-HHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 8899999987 67666654322222222233 2333333454210 01135667788899999999999888876
Q ss_pred ecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 398 VSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 398 ~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
..+ ..++++|++++. +..++.+.|.++||.+.++...+. ....+++||++.. .+++++++.++.|++++
T Consensus 361 ~~p-~gg~f~~~~l~~---~~~~~~~~l~~~gV~v~pg~~f~~--~~~~~~iRis~~~-----~~~~~i~~~~~~l~~~~ 429 (431)
T PRK15481 361 PSP-GDGLNLWLPLDT---DSQATALTLAKSGWLVREGEAFGV--SAPSHGLRITLST-----LNDAEINRLAADLHQAL 429 (431)
T ss_pred ccC-CCeEEEEEECCC---CHHHHHHHHHHCCcEEecCCcccc--CCCCCeEEEEcCC-----CChHHHHHHHHHHHHHh
Confidence 433 235677888753 346677777789999954332211 1123579999754 34799999999998876
Q ss_pred H
Q 009673 478 E 478 (529)
Q Consensus 478 ~ 478 (529)
+
T Consensus 430 ~ 430 (431)
T PRK15481 430 N 430 (431)
T ss_pred c
Confidence 4
No 111
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=1.7e-22 Score=216.35 Aligned_cols=343 Identities=17% Similarity=0.136 Sum_probs=216.0
Q ss_pred cceeEecCCCCCcHHHHHHHhhhhhc----cCC-C-CCCCCCCCCCchhHHHHHHHHHHHHHHHcC----CCCCCCceee
Q 009673 103 KSLELIASENFTSRAVMEAVGSCLTN----KYS-E-GLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNV 172 (529)
Q Consensus 103 ~~i~L~asen~~~~~V~eal~~~l~~----~y~-~-G~p~~r~~~g~~~~d~lE~~a~~~la~~~g----~~~~~~~~~V 172 (529)
..|+|..+||..+..+++.......+ .+. . -.....+|+......++.+.+.+++.+.+| ++++ +|
T Consensus 39 g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~----~I 114 (468)
T PLN02450 39 GIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPN----KL 114 (468)
T ss_pred eeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChH----He
Confidence 45899999997665555554333211 000 0 000011122222234566666677877766 3443 57
Q ss_pred ecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccc-cccceEEEEEcccCC-CCCCCCHHHHHHHhhh
Q 009673 173 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDE-STGLVDYDMLEKTAIL 249 (529)
Q Consensus 173 ~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~-~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~ 249 (529)
.+++|+ +++..++.++++|||.|++++|.|.++.. .+. ..|. ++++++++. +++.+|++++++.+++
T Consensus 115 iit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~--------~~~~~~g~--~~v~v~~~~~~~~~~~~~~le~~~~~ 184 (468)
T PLN02450 115 VLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDR--------DLKWRTGV--EIVPIHCSSSNGFQITESALEEAYQQ 184 (468)
T ss_pred EEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHH--------HHhhcCCc--EEEEEecCCccCCcCCHHHHHHHHHH
Confidence 789998 89999999999999999999998765421 222 2454 677777753 4578899999988764
Q ss_pred -----cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccc-cCCCC------------Cc-c
Q 009673 250 -----FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF------------KY-C 305 (529)
Q Consensus 250 -----~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~~------------~~-a 305 (529)
.++|+|++++|+||+ .. .+++|.++|++||++||+|++ |.++.+.+. ..+.+ .. -
T Consensus 185 ~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~-Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~ 263 (468)
T PLN02450 185 AQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEI-YSGTVFDSPGFVSVMEVLKDRKLENTDVSNR 263 (468)
T ss_pred HHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEcc-ccccccCCCCcccHHHHhhhcccccCCCCCc
Confidence 378999998999997 33 467788889999999999998 444443321 11111 01 1
Q ss_pred cEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc--CchHHHHHHHHHH
Q 009673 306 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ--SPEFKVYQNKVVS 381 (529)
Q Consensus 306 Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~--~~~~~~~~~~i~~ 381 (529)
-+++.|++|.+ +|.|.||++++++ .+.+.+.+.. .. ...+... ..+++.+|+.-. ...+++.++++.+
T Consensus 264 vi~l~S~SK~~~l~GlRiG~li~~~~-----~l~~~~~~~~-~~-~~~s~~~-Q~a~~~~L~~~~~~~~~l~~~~~~l~~ 335 (468)
T PLN02450 264 VHIVYSLSKDLGLPGFRVGAIYSNDE-----MVVSAATKMS-SF-GLVSSQT-QYLLSALLSDKKFTKNYLEENQKRLKQ 335 (468)
T ss_pred EEEEEeccccCCCCCccEEEEEECCH-----HHHHHHHHHh-hc-CCCCHHH-HHHHHHHhCCchhHHHHHHHHHHHHHH
Confidence 27889999986 8999999999863 3444443321 11 1122232 223333343210 0123566788888
Q ss_pred HHHHHHHHHHhcCcEEecCCCCCceEEEccCCC----CCcH-H-HHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccC
Q 009673 382 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPM----GIDG-A-RVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSP 454 (529)
Q Consensus 382 ~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~----~i~~-~-~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~ 454 (529)
+++.+.+.|++.|+.+..+ ..+.++|++++.. .... . .+.++|+++||.+. ||.. ....++++||++.
T Consensus 336 rr~~l~~~L~~~gi~~~~~-~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~----PG~~f~~~~~g~~Rl~f~ 410 (468)
T PLN02450 336 RQKKLVSGLEAAGIKCLKS-NAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNIS----PGSSCHCTEPGWFRVCFA 410 (468)
T ss_pred HHHHHHHHHHHcCCcccCC-CceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEe----CccccCCCCCCEEEEEec
Confidence 8999999999888876543 2355778887521 1111 1 24455678999994 5543 2224679999975
Q ss_pred CCccCCCCHHHHHHHHHHHHHHHH
Q 009673 455 AMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 455 ~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
. .+++++++..+.|++++.
T Consensus 411 ~-----~~~~~l~~~l~ri~~~l~ 429 (468)
T PLN02450 411 N-----MSEETLDLAMKRLKSFVE 429 (468)
T ss_pred C-----CCHHHHHHHHHHHHHHHH
Confidence 3 347899999999888775
No 112
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=9.7e-23 Score=211.83 Aligned_cols=309 Identities=17% Similarity=0.185 Sum_probs=213.0
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.|.|..+||+ +|+.+++++...+.+.. .||. .| ..++. +.+++.+|++++ +|.+++|+ +
T Consensus 30 ~~i~l~~nen~~~~~~~v~~a~~~~~~~~~--~Yp~----~g---~~~Lr----~aia~~~~~~~~----~I~vt~Gs~e 92 (366)
T PRK01533 30 SFVKLASNENPFGCSPRVLDELQKSWLDHA--LYPD----GG---ATTLR----QTIANKLHVKME----QVLCGSGLDE 92 (366)
T ss_pred ceEEeCCCCCCCCCCHHHHHHHHHHHHhcC--cCCC----CC---HHHHH----HHHHHHhCCCcc----eEEECCCHHH
Confidence 56899999985 68899999987654321 1332 11 22333 566778899875 56678998 8
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
++..++.++++|||+|++++|.|.++. ......|. +++.++++ ++.+|++++++.+++ ++++|++++
T Consensus 93 ~i~~~~~~l~~~gd~vlv~~P~y~~~~--------~~~~~~g~--~v~~v~~~--~~~~d~~~l~~~~~~-~~~~v~i~~ 159 (366)
T PRK01533 93 VIQIISRAVLKAGDNIVTAGATFPQYR--------HHAIIEGC--EVKEVALN--NGVYDLDEISSVVDN-DTKIVWICN 159 (366)
T ss_pred HHHHHHHHhcCCCCEEEEcCCcHHHHH--------HHHHHcCC--EEEEeecC--CCCcCHHHHHHHhCc-CCcEEEEeC
Confidence 999999999999999999999775432 12334555 66666664 457999999998876 899999999
Q ss_pred CCCCC--CCCHHHHHHHHH---HhCCEEEEecccccccccccccCCCC---C-c-ccEEEecccccc--cCCCCeEEEee
Q 009673 260 SAYPR--DFDYPRMRQIAD---AVGALLMMDMAHISGLVAASVVADPF---K-Y-CDVVTTTTHKSL--RGPRGGMIFFK 327 (529)
Q Consensus 260 s~~p~--~~d~~~i~~ia~---~~g~~livD~ah~~Gli~~~~~~~~~---~-~-aDiv~~S~hK~l--~GprgG~i~~~ 327 (529)
|+||+ ..+.+++.+|++ +++ ++|+|++++ .+...+..+..+ . + --+++.|++|++ +|+|.||++++
T Consensus 160 P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~ 237 (366)
T PRK01533 160 PNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYY-EYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH 237 (366)
T ss_pred CCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHH-HhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC
Confidence 99997 566666555554 444 677899864 444322111111 1 1 237889999986 78999999998
Q ss_pred CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchH-HHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 406 (529)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~ 406 (529)
+ ++.+.+.....+ .+.+.. ...++..+|+ ..++ ++..+.+.++++.+.+.|+..|+++..+ +..+
T Consensus 238 ~------~~~~~l~~~~~~--~~~~~~-~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~~~--~~nf 303 (366)
T PRK01533 238 E------ELIEKLNVVRLP--FNVSSL-AQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKENEIPFYQS--QTNF 303 (366)
T ss_pred H------HHHHHHHHhcCC--CCcCHH-HHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCC--cCcE
Confidence 7 777777654432 222222 3333333443 2333 5666777788888888888888876654 3556
Q ss_pred EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 407 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 407 ~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+|+.+. +...+.+.|.++||.|.. + ++++||++. +.++++++.++|++++.
T Consensus 304 ~~~~~~----~~~~~~~~l~~~GI~Vr~---------~-~~~iRis~~-------~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 304 IFLPVE----NGGEIYEACAHAGFIIRP---------F-PNGVRITVG-------TREQNEGVISVLQQHFE 354 (366)
T ss_pred EEEeCC----CHHHHHHHHHHCCcEEcc---------C-CCceEEeCC-------CHHHHHHHHHHHHHHHH
Confidence 788763 356788888899999963 1 467999863 36999999999988765
No 113
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.91 E-value=4.5e-22 Score=214.24 Aligned_cols=332 Identities=14% Similarity=0.102 Sum_probs=210.9
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhc-C
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL-K 190 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all-~ 190 (529)
..|..+++++...+.+.- .+ .-.|+...-..++++...+++.+..|.+.+. -+|.+|+|+ +|+..++.+++ +
T Consensus 88 ~~P~~~~~~~~~~~~~~~-~~---~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~--~~I~it~Ga~~al~~~~~~l~~~ 161 (481)
T PTZ00377 88 LFPADVVARAKEYLNAIG-GG---TGAYTDSAGYPFVRKAVAAFIERRDGVPKDP--SDIFLTDGASSGIKLLLQLLIGD 161 (481)
T ss_pred cCCHHHHHHHHHHHHhCC-Cc---ccCcCcccCCHHHHHHHHHHHHHhcCCCCCh--hhEEEcCCHHHHHHHHHHHhccC
Confidence 346688888765543311 00 0112222234566666668888777765432 367789998 99999999998 7
Q ss_pred CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhc-----CCcEEEEcCCCCCC
Q 009673 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-----RPKLIIAGASAYPR 264 (529)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~-----~pklIi~~~s~~p~ 264 (529)
|||.|++++|.|.++. ..+...|. +++.++++++ ++.+|+++|++.+++. ++|+|++++|+||+
T Consensus 162 ~gD~Vlv~~P~y~~y~--------~~~~~~g~--~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPT 231 (481)
T PTZ00377 162 PSDGVMIPIPQYPLYS--------AAITLLGG--KQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPT 231 (481)
T ss_pred CCCEEEECCCCchhHH--------HHHHHcCC--EEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCC
Confidence 9999999999776542 13345555 6677777654 4689999999998752 68988888899997
Q ss_pred --CCC---HHHHHHHHHHhCCEEEEeccccccccccc--ccCCC------CC--c----ccEEEecccccc---cCCCCe
Q 009673 265 --DFD---YPRMRQIADAVGALLMMDMAHISGLVAAS--VVADP------FK--Y----CDVVTTTTHKSL---RGPRGG 322 (529)
Q Consensus 265 --~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~--~~~~~------~~--~----aDiv~~S~hK~l---~GprgG 322 (529)
..+ +++|.++|++||++||+|+++ ..+++.+ ..++. +. + .-+++.|++|++ +|+|.|
T Consensus 232 G~~~s~e~~~~i~~~a~~~~~~iI~De~Y-~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG 310 (481)
T PTZ00377 232 GQVLTRDVMEEIIKFCYEKGIVLMADEVY-QENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGG 310 (481)
T ss_pred CcCCCHHHHHHHHHHHHHCCCEEEEehhh-HhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceE
Confidence 444 788999999999999999984 4554422 11110 11 1 126778999974 699999
Q ss_pred EEEe---eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh--cCc---hH----HHHHHHHHHHHHHHHHHH
Q 009673 323 MIFF---KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSP---EF----KVYQNKVVSNCRALASRL 390 (529)
Q Consensus 323 ~i~~---~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~--~~~---~~----~~~~~~i~~~a~~l~~~L 390 (529)
|+++ ++ ++.+++.+..... .+.+...+.+ +..+++.. ... .+ +...+++.++++.+.+.|
T Consensus 311 ~~~~~~~p~------~li~~l~~~~~~~-~~~~~~~Q~a-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L 382 (481)
T PTZ00377 311 YFELTNIPP------EVREQIYKLASIN-LCSNVVGQLM-TGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDEL 382 (481)
T ss_pred EEEEeCCCH------HHHHHHHHHhhee-cCCChHHHHH-HHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9987 44 6777665543222 2333333333 33344310 011 12 222234577888899999
Q ss_pred Hhc-CcEEecCCCCCceEEEccC-CCC---------C--cHHHHHHhHhcCCeEEcCCCCCCCCC-C-CCCCeEEEccCC
Q 009673 391 VEL-GYKLVSGGSDNHLVLVDLR-PMG---------I--DGARVEKILDMASITLNKNSVPGDKS-A-LVPGGIRIGSPA 455 (529)
Q Consensus 391 ~~~-G~~v~~~gt~~~~~~v~~~-~~~---------i--~~~~~~~~L~~~GI~v~~~~~Pg~~~-~-~~~~~iRig~~~ 455 (529)
++. |+.+..+ ..++++|+++. +.+ + +...+..+|++.||.+ .||+.. . ...+++||++.
T Consensus 383 ~~~~g~~~~~p-~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v----~pG~~F~~~~~~~~~Rls~~- 456 (481)
T PTZ00377 383 NKIEGVSCQPV-EGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVV----VPGSGFGQKPGTYHFRITIL- 456 (481)
T ss_pred hcCCCcEeecC-CeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEE----eCCcccCCCCCCCEEEEEEC-
Confidence 875 8887654 22456676653 111 1 1223567888999999 455441 1 13468999864
Q ss_pred CccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 456 MTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 456 ~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
.+++++++..+.|.++++..
T Consensus 457 -----~~~e~l~~~l~rl~~~~~~~ 476 (481)
T PTZ00377 457 -----PPEEQIEEMVKKIKEFHESF 476 (481)
T ss_pred -----CCHHHHHHHHHHHHHHHHHH
Confidence 34688999988888877643
No 114
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.91 E-value=5.3e-22 Score=207.74 Aligned_cols=333 Identities=19% Similarity=0.181 Sum_probs=215.3
Q ss_pred cceeEecCC--CC-CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 009673 103 KSLELIASE--NF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (529)
Q Consensus 103 ~~i~L~ase--n~-~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~ 179 (529)
+.|+|..++ .+ .++.+++++...+. ++...+...++..|. ..+.+.+.+++++++|.+. .|.+++|++
T Consensus 34 ~~id~~~~~~~g~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~g~---~~l~~~l~~~l~~~~g~~~-----~i~~~sG~~ 104 (385)
T TIGR01825 34 EVINLSSNNYLGFADHPRLKEAAAQAIQ-QYGVGAGAVRTIAGT---LRLHEELEEKLAKFKKTEA-----ALVFQSGFN 104 (385)
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHH-HcCCCCCccCcccCC---cHHHHHHHHHHHHHhCCCc-----EEEECcHHH
Confidence 557887654 34 68899998887653 332222222223333 2333445588889999653 466799999
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc---CCcEEE
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLII 256 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~---~pklIi 256 (529)
++..++.++++|||.|++.++.|+++.. .+...|. +++.+ ..+|++++++.+++. ++++|+
T Consensus 105 a~~~a~~~~~~~gd~vi~~~~~~~~~~~--------~~~~~g~--~~~~~------~~~d~~~l~~~l~~~~~~~~~~v~ 168 (385)
T TIGR01825 105 TNQGVLSALLRKGDIVLSDELNHASIID--------GLRLTKA--TKKIY------KHADMDDLDRVLRENPSYGKKLIV 168 (385)
T ss_pred HHHHHHHHhCCCCCEEEEEccccHHHHH--------HHHhcCC--ceEEe------CCCCHHHHHHHHHhhccCCCeEEE
Confidence 9999999999999999999887765431 1223333 33332 157888998877642 577888
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccc-cc---cCCCC-CcccEEEecccccccCCCCeEEEeeCC
Q 009673 257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV---VADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (529)
Q Consensus 257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~~---~~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~ 329 (529)
++...+++ ..|+++|.++|++||+++|+|++|..|.... +. ....+ ...|+++.|+||++ |++|||+++++
T Consensus 169 ~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~gG~~~~~~- 246 (385)
T TIGR01825 169 TDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAI-GVVGGYAAGHK- 246 (385)
T ss_pred EecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHh-hcCCCEEecCH-
Confidence 77655543 6799999999999999999999986664421 10 00112 24689999999998 56789998877
Q ss_pred CcchhHHHhhhcccccCCCCC-CChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673 330 PVLGVELESAINNAVFPGLQG-GPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~p~~~g-~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~ 408 (529)
++.+.+.....++..+ .++...++++..+++.... ..+..+++.++++.+.+.|.+.|+++..+. ..++.
T Consensus 247 -----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~~~ 317 (385)
T TIGR01825 247 -----ELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKLGYDTGGSE--TPITP 317 (385)
T ss_pred -----HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCCCC--CCEEE
Confidence 6666664432222222 2334445555566765432 234667778889999999998888876542 23333
Q ss_pred EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+.+.. ..+..++.+.|.+.||.+.....|.. +.....||++.+.. .+++|++++++.|+++++
T Consensus 318 ~~~~~-~~~~~~~~~~L~~~gi~v~~~~~~~~--~~~~~~iRi~~~~~----~~~e~i~~~~~~l~~~~~ 380 (385)
T TIGR01825 318 VVIGD-EKAAQEFSRRLFDEGIFAQSIVFPTV--PRGTARIRNIPTAE----HTKDDLDQALDAYEKVGK 380 (385)
T ss_pred EEECC-HHHHHHHHHHHHHCCcEEcccCCCCC--CCCCceEEEEEcCC----CCHHHHHHHHHHHHHHHH
Confidence 33321 12345666666666999854322211 12346799976543 458999999999998774
No 115
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.91 E-value=3.2e-22 Score=210.76 Aligned_cols=328 Identities=21% Similarity=0.250 Sum_probs=214.5
Q ss_pred EecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 009673 107 LIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (529)
Q Consensus 107 L~asen~~----~~~V~eal~~~l~~~y~~G~p~~r~~~g-~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~ 181 (529)
...|.+|+ +|+|++|+...+ ++|..|..++|...| .+...++| +.+++++|.+. .+..+||++||
T Consensus 49 ~~~sn~ylgl~~~p~v~~a~~~~~-~~~~~~~~~s~~~~g~~~~~~~Le----~~la~~~g~~~-----~l~~~sG~~an 118 (402)
T TIGR01821 49 VWCSNDYLGMGQHPEVLQAMHETL-DKYGAGAGGTRNISGTNIPHVELE----AELADLHGKES-----ALVFTSGYVAN 118 (402)
T ss_pred EeEccCcCCCCCCHHHHHHHHHHH-HHcCCCCcchhhhhCCcHHHHHHH----HHHHHHhCCCe-----EEEECchHHHH
Confidence 34567764 789999998777 456656556664433 44455555 77888999653 36679999999
Q ss_pred HHHHHhhcC--CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEE
Q 009673 182 FEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLII 256 (529)
Q Consensus 182 ~~~l~all~--pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---~~pklIi 256 (529)
..++..+.. +||.|+.....|++... .+...|. +...++ ..|++++++.++. .++++|+
T Consensus 119 ~~ai~~l~~~~~~~~v~~~~~~h~s~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~~~~v~ 182 (402)
T TIGR01821 119 DATLATLAKIIPGCVIFSDELNHASMIE--------GIRHSGA--EKFIFR------HNDVAHLEKLLQSVDPNRPKIIA 182 (402)
T ss_pred HHHHHHhhCCCCCCEEEEcchHhHHHHH--------HHHHcCC--eEEEEC------CCCHHHHHHHHHhccCCCCeEEE
Confidence 999988765 78888776555543321 1223343 333332 2477888887763 2578888
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccc---cccC-CCC-CcccEEEecccccccCCCCeEEEeeCC
Q 009673 257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVVA-DPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (529)
Q Consensus 257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~---~~~~-~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~ 329 (529)
++++++++ ..|+++|.++|++||+++++|++|..|.... +... ..+ ...|++++|++|++ |..|||+++++
T Consensus 183 ~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~-g~~GG~i~~~~- 260 (402)
T TIGR01821 183 FESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAF-GVVGGYIAASR- 260 (402)
T ss_pred EcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhh-ccCCceeecCH-
Confidence 88776664 7899999999999999999999998775422 1111 111 13689999999998 45669998887
Q ss_pred CcchhHHHhhhcccccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673 330 PVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~ 408 (529)
++.+.+.....+.. .++.+...+++...+++.+... ....++..++++++.+.|++.|++++.+ .++++.
T Consensus 261 -----~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~i~~ 331 (402)
T TIGR01821 261 -----KLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALGIPVIPN--PSHIVP 331 (402)
T ss_pred -----HHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCCC--CCCEEE
Confidence 66666543221211 2223333444444577765432 4455666788999999999888876653 344544
Q ss_pred EccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 409 VDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 409 v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+.+.. .....++.+.| ++.||.+.....|.- +.+...|||+.+.. ++++|++++++.|+++++
T Consensus 332 i~~~~-~~~a~~~~~~L~~~~Gi~v~~~~~p~~--~~g~~~lRis~~~~----~t~edi~~~~~~l~~~~~ 395 (402)
T TIGR01821 332 VIIGD-AALCKKVSDLLLNKHGIYVQPINYPTV--PRGTERLRITPTPA----HTDKMIDDLVEALLLVWD 395 (402)
T ss_pred EEeCC-HHHHHHHHHHHHhcCCEEEEeECCCCC--CCCCceEEEEeCCC----CCHHHHHHHHHHHHHHHH
Confidence 44421 11234566665 567999976433321 22346899998765 458999999999998875
No 116
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.91 E-value=6.3e-23 Score=207.69 Aligned_cols=347 Identities=19% Similarity=0.199 Sum_probs=219.1
Q ss_pred cceeEec-CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HH
Q 009673 103 KSLELIA-SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 180 (529)
Q Consensus 103 ~~i~L~a-sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A 180 (529)
+.+.|.. +..+++++|++||..++.+.| |.|..++| |.+..+.+| .+|+.+++++|+++.+ |..|+|+ ++
T Consensus 43 ~~vyld~~at~p~~~~Vldam~~~~~~~~--~nPh~~~y-~w~~~~~~E-~aR~~VAklInAd~~d----IiFts~ATEs 114 (428)
T KOG1549|consen 43 RPVYLDNQATGPMDPRVLDAMLPYLLEYL--GNPHSRSY-GWKAEDAVE-AAREQVAKLINADPSD----IVFTSGATES 114 (428)
T ss_pred ccEEEecCcCCCCCHHHHHHHHHHHHHhh--cCCCcccc-chhhhHHHH-HHHHHHHHHhCCCCCc----EEEeCCchHH
Confidence 4566653 456889999999998887665 67877733 445556677 5789999999999974 4456665 99
Q ss_pred HHHHHHhh-cCCCC----EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673 181 NFEVYTAI-LKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (529)
Q Consensus 181 ~~~~l~al-l~pGD----~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI 255 (529)
|.+++.++ ..++| +|+.++.+|.++.-.. ..+...++++..+|++ +++.+|.+.+++.|++ +|+++
T Consensus 115 ~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~-------~~l~~~g~~Vt~lpv~-~~~~~d~~~~~~~i~~-~T~lv 185 (428)
T KOG1549|consen 115 NNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSC-------RALQEEGLEVTYLPVE-DSGLVDISKLREAIRS-KTRLV 185 (428)
T ss_pred HHHHHHHhhccccccccceEEEecccCcchhHHH-------HHHHhcCeEEEEeccC-ccccccHHHHHHhcCC-CceEE
Confidence 99999887 55777 9999998887764221 1122233688888887 7799999999999999 99999
Q ss_pred EEcC-CCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcc
Q 009673 256 IAGA-SAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL 332 (529)
Q Consensus 256 i~~~-s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~ 332 (529)
.+.. ++.++ .+|+++|+++|++.|+.+++|+||..|.+..|+... ++|++++|.|||+ ||+| |++++++...
T Consensus 186 ~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~el---n~D~~s~s~HK~y-gp~~iGaLYvr~~~~- 260 (428)
T KOG1549|consen 186 SIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQEL---NADFLSISAHKIY-GPPGIGALYVRRKRP- 260 (428)
T ss_pred EEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHc---Cchheeeeccccc-CCCcceEEEEccCCC-
Confidence 8874 33344 789999999999999999999999999886665443 5899999999987 7776 9999987210
Q ss_pred hhHHHhhhcccccC------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecCCCC-
Q 009673 333 GVELESAINNAVFP------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGSD- 403 (529)
Q Consensus 333 ~~~l~~~i~~~~~p------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~gt~- 403 (529)
.+. ....... ...|+.......++..|.+.+.. +..-....+.+....+...+.. ....+...+..
T Consensus 261 --~~~--~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~-~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~~ 335 (428)
T KOG1549|consen 261 --RLR--VEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNK-EMAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKSR 335 (428)
T ss_pred --ccc--ccCcccCCccccccccCCcCchhhhhhHHHHHHHHh-hcchhHHHHHHHHHHHHHHHhhhCchhhccCCcccc
Confidence 010 0000011 12455566666677666665432 2122222223333444444322 12222221111
Q ss_pred -CceEEEccC-CCCCcH-HHHHHhHhcCCeEEcCCC-CC-------CCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673 404 -NHLVLVDLR-PMGIDG-ARVEKILDMASITLNKNS-VP-------GDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 472 (529)
Q Consensus 404 -~~~~~v~~~-~~~i~~-~~~~~~L~~~GI~v~~~~-~P-------g~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~ 472 (529)
....-+.+. ..+... .+....-..-|..+..+. -| |.......++||||...+|+ ++|++++++.
T Consensus 336 ~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t----~~di~~~~~~ 411 (428)
T KOG1549|consen 336 YPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTT----EEDIDYLVDA 411 (428)
T ss_pred cccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCc----HHHHHHHHHH
Confidence 111222222 112111 111111111222221111 11 11112346789999988876 8999999999
Q ss_pred HHHHHHHH
Q 009673 473 IHEGVEIT 480 (529)
Q Consensus 473 i~~~~~~~ 480 (529)
|.+.++..
T Consensus 412 i~~~v~~~ 419 (428)
T KOG1549|consen 412 IKKLVSLL 419 (428)
T ss_pred HHHHHHhc
Confidence 99888754
No 117
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.91 E-value=5.2e-22 Score=206.84 Aligned_cols=315 Identities=17% Similarity=0.137 Sum_probs=209.2
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---- 189 (529)
+.+.+.+++...+... .|.++ .|.+. ..+++.+++++++++|+++++ .+..++|++++..++.++.
T Consensus 32 ~~~~~~~a~~~~~~~~--~~~~~--~~~~~---~~~~~~~~~~la~~~g~~~~~---~~~~~g~~~~~~~~~~~~~~~~~ 101 (373)
T TIGR03812 32 PHPIAVKAYDMFIETN--LGDPG--LFPGT---KKIEEEVVGSLGNLLHLPDAY---GYIVSGGTEANIQAVRAAKNLAR 101 (373)
T ss_pred chHHHHHHHHHHhhcC--CCCcc--cCccH---HHHHHHHHHHHHHHhCCCCCC---eEEeccHHHHHHHHHHHHHHHHh
Confidence 4455677776554332 23333 23332 344556779999999998642 2334555688887776653
Q ss_pred --CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCc-EEEEcCCCCCC--
Q 009673 190 --KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK-LIIAGASAYPR-- 264 (529)
Q Consensus 190 --~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pk-lIi~~~s~~p~-- 264 (529)
++||+|+++++.|.+.. +.+...|. +++.++++ +++.+|++++++.+++ ++. ++++. +++++
T Consensus 102 ~~~~g~~vl~~~~~h~~~~--------~~~~~~G~--~~~~v~~~-~~~~~d~~~l~~~l~~-~~~~vv~~~-~~~~tG~ 168 (373)
T TIGR03812 102 EEKRTPNIIVPESAHFSFE--------KAAEMLGL--ELRYAPLD-EDYTVDVKDVEDLIDD-NTIGIVGIA-GTTELGQ 168 (373)
T ss_pred ccCCCcEEEECCcchHHHH--------HHHHHcCC--eEEEEeeC-CCCCcCHHHHHHHHhh-CcEEEEEEC-CCCCCCc
Confidence 47899999887664321 13344565 55556665 4678999999999977 564 44444 44443
Q ss_pred CCCHHHHHHHHHHhCCEEEEeccccccccccc---cc--CCCC--CcccEEEecccccccCC-CCeEEE-eeCCCcchhH
Q 009673 265 DFDYPRMRQIADAVGALLMMDMAHISGLVAAS---VV--ADPF--KYCDVVTTTTHKSLRGP-RGGMIF-FKKDPVLGVE 335 (529)
Q Consensus 265 ~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~---~~--~~~~--~~aDiv~~S~hK~l~Gp-rgG~i~-~~~~~~~~~~ 335 (529)
..|+++|.++|+++|+++++|+||..+.+... .. ...+ .++|++++|+|||+.+| ++|+++ .++ +
T Consensus 169 ~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~------~ 242 (373)
T TIGR03812 169 IDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSK------S 242 (373)
T ss_pred cCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCH------H
Confidence 77999999999999999999999875543211 11 1111 26899999999986444 445444 454 5
Q ss_pred HHhhhcccccCCC--------CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673 336 LESAINNAVFPGL--------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 407 (529)
Q Consensus 336 l~~~i~~~~~p~~--------~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~ 407 (529)
+.+.++.. .++. .|+++...++++..+++.+...++++..++..+++++|.+.|++.|+..+.+. ..+++
T Consensus 243 ~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~v 320 (373)
T TIGR03812 243 YLKYLSVD-APYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIEP-VLNIV 320 (373)
T ss_pred HHhhhccc-CcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCC-CceEE
Confidence 55554321 1211 25666677888888888776667788899999999999999999887654332 23444
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
.+.+. +...+.+.|.+.||.+.... .+..||++++.. .+++|++++++.|++
T Consensus 321 ~~~~~----~~~~v~~~L~~~gi~v~~~~--------~~~~iRis~~~~----~t~edid~l~~~L~~ 372 (373)
T TIGR03812 321 AFEVD----DPEEVRKKLRDRGWYVSVTR--------CPKALRIVVMPH----VTREHIEEFLEDLKE 372 (373)
T ss_pred EEEeC----CHHHHHHHHHHCCceeccCC--------CCCEEEEEEECC----CCHHHHHHHHHHHhh
Confidence 44432 24578888888899985421 246899998654 458999999999875
No 118
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.91 E-value=1.6e-22 Score=208.13 Aligned_cols=301 Identities=14% Similarity=0.098 Sum_probs=190.9
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC-hHHHHHHHHHhhcCCCC
Q 009673 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTAILKPHD 193 (529)
Q Consensus 115 ~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s-Gs~A~~~~l~all~pGD 193 (529)
.|.++++....+ ++|. | ..+..+++| +.+++++|+++++ +.+++ |++||..++.++++|||
T Consensus 35 ~~~~~~~~~~~~-~~~~-g--------~~~~~~~Le----~~lA~~~g~~~e~----ilv~~gg~~a~~~~~~al~~~gd 96 (346)
T TIGR03576 35 GFKIDEEDLELL-ETYV-G--------PAIFEEKVQ----ELGREHLGGPEEK----ILVFNRTSSAILATILALEPPGR 96 (346)
T ss_pred ChhHHHHHHHHH-HHhc-C--------CHHHHHHHH----HHHHHHcCCCcce----EEEECCHHHHHHHHHHHhCCCCC
Confidence 577777776554 3441 1 124445555 7889999997653 33344 55999999999999999
Q ss_pred EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-C---CCHH
Q 009673 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-D---FDYP 269 (529)
Q Consensus 194 ~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~---~d~~ 269 (529)
+|+++.|+...|.+.. ..+.+.|. +++.+ .|+++++. . + ++++|+++.+++.+ . .+++
T Consensus 97 ~Vli~~~d~p~~~s~~-----~~~~l~ga--~~~~~--------~~l~~l~~-~-~-~~~lIiitg~s~~G~v~~~~~L~ 158 (346)
T TIGR03576 97 KVVHYLPEKPAHPSIP-----RSCKLAGA--EYFES--------DELSELKK-I-D-GTSLVVITGSTMDLKVVSEEDLK 158 (346)
T ss_pred EEEECCCCCCCchhHH-----HHHHHcCC--EEecc--------CCHHHHhh-C-c-CceEEEEECCCCCCcccCHHHHH
Confidence 9998655444443221 13444554 32221 24555432 2 3 68888876544333 3 5899
Q ss_pred HHHHHHHHhCCEEEEecccccccccc-cccCCCCC-cccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccccCC
Q 009673 270 RMRQIADAVGALLMMDMAHISGLVAA-SVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG 347 (529)
Q Consensus 270 ~i~~ia~~~g~~livD~ah~~Gli~~-~~~~~~~~-~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~ 347 (529)
+|+++|+++|++|++|+||..|.... +. ..... +.|++++|+||+++|+|+||+++++ ++.+.+.+...+.
T Consensus 159 ~i~~la~~~~~~livDEAy~~~~~~~~~~-~~~~~~~~divv~s~SKalaG~r~G~v~~~~------~li~~l~~~~~~~ 231 (346)
T TIGR03576 159 RVIKQAKSKEAIVLVDDASGARVRRLYGQ-PPALDLGADLVVTSTDKLMDGPRGGLLAGRK------ELVDKIKSVGEQF 231 (346)
T ss_pred HHHHHHHHcCCEEEEECCccccccccCCC-CCHHHcCCcEEEeccchhccccceEEEEeCH------HHHHHHHHhhcCc
Confidence 99999999999999999998765321 11 11111 4689999999999999999999998 7777776654444
Q ss_pred CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhc
Q 009673 348 LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDM 427 (529)
Q Consensus 348 ~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~ 427 (529)
..+.+.. ..++...+|+... .+...+.+.++++.+.+.+.+ +.+... ...++++++.... +.+.+.++|++
T Consensus 232 ~~s~~~~-~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~--~~~~~~--~~~f~~~~~~~~~-~~~~~~~ll~~ 302 (346)
T TIGR03576 232 GLEAQAP-LLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDK--LNVERT--PTGFVIKGVEEEK-LIEIGLDLLRN 302 (346)
T ss_pred ccCccHH-HHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHh--CCCCcC--CCeEEEEeCCCCC-HHHHHHHHHHh
Confidence 3333333 4444445676432 244556666777766677764 444332 2346787875311 23667889999
Q ss_pred CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHH---HHHHHHHHHHHHH
Q 009673 428 ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK---EFVAIADFIHEGV 477 (529)
Q Consensus 428 ~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~---d~~~la~~i~~~~ 477 (529)
+||.+. |+...+..++++||++. ..++ +++++.+.|++.+
T Consensus 303 ~gV~v~----~~~~f~~~~~~vRis~~------~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 303 YGIITI----TAVGMPGASKTLRFDLA------AKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred CCEEEe----CCcccCCCCCeEEEEEe------cChHHhcCHHHHHHHHHhcc
Confidence 999995 44321223678999853 1233 6999998887643
No 119
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.91 E-value=4.3e-22 Score=208.64 Aligned_cols=335 Identities=13% Similarity=0.093 Sum_probs=215.7
Q ss_pred cCCCCC----cHHHHHHHhhhhhccCCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673 109 ASENFT----SRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (529)
Q Consensus 109 asen~~----~~~V~eal~~~l~~~y~~G~p~~r~-~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~ 183 (529)
+|.+|+ .|+++++....+ .+|..|..+.|. |+......++| +++++++|.+. .+.++||+.|+..
T Consensus 4 ~s~dyLgl~~~~~~~~~~~~a~-~~~g~~~~~sr~~yg~~~~~~~LE----~~lA~~~g~e~-----al~~~sG~~a~~~ 73 (392)
T PLN03227 4 ATHDFLSTSSSPTLRQTALESL-SHYGCGSCGPRGFYGTIDAHLELE----QCMAEFLGTES-----AILYSDGASTTSS 73 (392)
T ss_pred cCcCccCCCCCHHHHHHHHHHH-HHhCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHH
Confidence 455554 688999888776 467777777774 44445566777 78899999975 3667999999999
Q ss_pred HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh----------cCCc
Q 009673 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL----------FRPK 253 (529)
Q Consensus 184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~----------~~pk 253 (529)
++.++++|||+|++.++.|++.+. .+.+.+. +++.++.+ ..-|++.+.+.+.. .+++
T Consensus 74 ~i~~l~~~GD~Vl~~~~~h~s~~~--------~~~l~~~--~~~~~~~~---d~~~l~~~~~~i~~~~~a~~~~~~~~t~ 140 (392)
T PLN03227 74 TVAAFAKRGDLLVVDRGVNEALLV--------GVSLSRA--NVRWFRHN---DMKDLRRVLEQVRAQDVALKRKPTDQRR 140 (392)
T ss_pred HHHHhCCCCCEEEEeccccHHHHH--------HHHHcCC--eEEEeCCC---CHHHHHHHHHHhhhhccccccccCCCcE
Confidence 999999999999999987765432 1223332 45454432 11233333334321 1467
Q ss_pred EEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccc---ccc----CCCCCcccEEEecccccccCCCCeEE
Q 009673 254 LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVV----ADPFKYCDVVTTTTHKSLRGPRGGMI 324 (529)
Q Consensus 254 lIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~---~~~----~~~~~~aDiv~~S~hK~l~GprgG~i 324 (529)
+|++.++.+++ ..|+++|+++|++||+++|+|++|..|.... +.. ..|..++|++++|++|.+ ||.||++
T Consensus 141 ~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~~gg~v 219 (392)
T PLN03227 141 FLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GSVGGMT 219 (392)
T ss_pred EEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hccCcEE
Confidence 88887655443 7899999999999999999999998665422 110 012336799999999985 7999999
Q ss_pred EeeCCCcchhHHHhhhcccccCCCCCCC--hHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC--
Q 009673 325 FFKKDPVLGVELESAINNAVFPGLQGGP--HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG-- 400 (529)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p--~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~-- 400 (529)
++++ ++.+.+.........++. .....+++ .+++.... .++..+++.++.++|.+.|++.+++.+.+
T Consensus 220 ~~~~------~~~~~~~~~~~~~~~~~~~~p~~~~aa~-~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~r 290 (392)
T PLN03227 220 VGSE------EVVDHQRLSGSGYCFSASAPPFLAKADA-TATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYALKLR 290 (392)
T ss_pred ecCH------HHHHHHHHhCcCccccCCCCHHHHHHHH-HHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence 8887 566554332222233432 22334443 34544322 24677888999999999998755542211
Q ss_pred -------CCCCceEEEccCCCCCc--------HHHHHHhHhcCCeEEcCCC-CCCCC-CCCCCCeEEEccCCCccCCCCH
Q 009673 401 -------GSDNHLVLVDLRPMGID--------GARVEKILDMASITLNKNS-VPGDK-SALVPGGIRIGSPAMTTRGFSE 463 (529)
Q Consensus 401 -------gt~~~~~~v~~~~~~i~--------~~~~~~~L~~~GI~v~~~~-~Pg~~-~~~~~~~iRig~~~~tt~g~~~ 463 (529)
.+.++++.+.+.+...+ ...+.+.|.+.||.+.... .|... ....+..||+.+++ ++++
T Consensus 291 g~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~----~~t~ 366 (392)
T PLN03227 291 NRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANA----SHTR 366 (392)
T ss_pred cccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecC----CCCH
Confidence 12344555555321111 1367778888999885311 11100 11124679998754 5779
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009673 464 KEFVAIADFIHEGVEIT 480 (529)
Q Consensus 464 ~d~~~la~~i~~~~~~~ 480 (529)
+|++++++.|++++...
T Consensus 367 eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 367 EDIDKLLTVLGEAVEAI 383 (392)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998654
No 120
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.91 E-value=5.2e-22 Score=209.12 Aligned_cols=340 Identities=16% Similarity=0.098 Sum_probs=211.8
Q ss_pred hcceeEecCCC------CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--CCCCCCceeee
Q 009673 102 FKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQ 173 (529)
Q Consensus 102 ~~~i~L~asen------~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g--~~~~~~~~~V~ 173 (529)
++.++|..++. .+++.+++++...+......+|.. ..| ..++++...+++.+ .+ ++++ +|.
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g---~~~lr~aia~~~~~-~~~~~~~~----~i~ 99 (401)
T TIGR01264 31 KPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAP---TVG---ALSAREAIASYYHN-PDGPIEAD----DVV 99 (401)
T ss_pred CCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCC---CCC---CHHHHHHHHHHHhh-cCCCCCHH----HEE
Confidence 35588876553 367889999887665432123321 112 23444333344433 22 3333 466
Q ss_pred cCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcC
Q 009673 174 PLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFR 251 (529)
Q Consensus 174 ~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~ 251 (529)
+++|+ +|+..++.++++|||+|++++|.|..+. ......|. ++++++++.+ ++.+|++.+++.++. +
T Consensus 100 ~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~--------~~~~~~g~--~v~~~~~~~~~~~~~d~~~l~~~~~~-~ 168 (401)
T TIGR01264 100 LCSGCSHAIEMCIAALANAGQNILVPRPGFPLYE--------TLAESMGI--EVKLYNLLPDKSWEIDLKQLESLIDE-K 168 (401)
T ss_pred ECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHH--------HHHHHcCC--EEEEeecCCccCCCCCHHHHHHHhcc-C
Confidence 68877 9999999999999999999998765432 12334454 5666666533 578999999998876 7
Q ss_pred CcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-cc-cEEEeccccc--ccCC
Q 009673 252 PKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YC-DVVTTTTHKS--LRGP 319 (529)
Q Consensus 252 pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~a-Div~~S~hK~--l~Gp 319 (529)
+++|++++|+||+ .. ++++|.++|+++|++|++|++ |..+.+.+....++ . .. -|++.|++|+ ++|.
T Consensus 169 ~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~-y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl 247 (401)
T TIGR01264 169 TAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEI-YGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGW 247 (401)
T ss_pred ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhh-hhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccc
Confidence 8999999999997 33 588899999999999999998 44555433211121 1 11 2778999997 4899
Q ss_pred CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEe
Q 009673 320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV 398 (529)
Q Consensus 320 rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~ 398 (529)
|.||+++++......++.+.+.....+. .+.+.. ...++..++.......+++.++++.++++.+.+.|++. |+.+.
T Consensus 248 RiG~iv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~ 325 (401)
T TIGR01264 248 RLGWIIIHDRRGILRDIRDGLVKLSQRI-LGPCTI-VQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPV 325 (401)
T ss_pred eEEEEEecCcchhHHHHHHHHHHHhhcc-CCCCcH-HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCccc
Confidence 9999998752100112333333221111 111122 22333334543112334777888888999999999885 66644
Q ss_pred cCCCCCceEEEccCC----CCCcHHHHH-HhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673 399 SGGSDNHLVLVDLRP----MGIDGARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473 (529)
Q Consensus 399 ~~gt~~~~~~v~~~~----~~i~~~~~~-~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i 473 (529)
.+ ....++|+++.. ...+..++. .+++++||.+. ||.... .++++||++. ..++++++..+.|
T Consensus 326 ~p-~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~----pg~~f~-~~~~iRis~~------~~~~~l~~~l~rl 393 (401)
T TIGR01264 326 MP-SGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCL----PGSCFE-YPGFFRVVLT------VPVVMMEEACSRI 393 (401)
T ss_pred CC-CeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEe----CchhcC-CCCeEEEEEc------CCHHHHHHHHHHH
Confidence 33 235677887642 122445554 44578999994 443311 3579999864 2367888888888
Q ss_pred HHHHH
Q 009673 474 HEGVE 478 (529)
Q Consensus 474 ~~~~~ 478 (529)
.+.++
T Consensus 394 ~~~~~ 398 (401)
T TIGR01264 394 QEFCE 398 (401)
T ss_pred HHHHh
Confidence 77654
No 121
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.91 E-value=2.3e-22 Score=212.46 Aligned_cols=342 Identities=16% Similarity=0.142 Sum_probs=217.2
Q ss_pred hcceeEecCCC------CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--------CCCCC
Q 009673 102 FKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--------LDENK 167 (529)
Q Consensus 102 ~~~i~L~asen------~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g--------~~~~~ 167 (529)
.+.|+|..++. ++++.+.+++...+......+|+. .....++++.+.+++.+.++ ++++
T Consensus 33 ~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~------~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~- 105 (412)
T PTZ00433 33 KSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPP------TVGSPEAREAVATYWRNSFVHKESLKSTIKKD- 105 (412)
T ss_pred CCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCC------CCCcHHHHHHHHHHHHhhccccccccCCCChh-
Confidence 35678876553 468899999887665321123332 22234566555566666553 3443
Q ss_pred CceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHH
Q 009673 168 WGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEK 245 (529)
Q Consensus 168 ~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~ 245 (529)
+|.+|+|+ +++..++.++++|||+|++++|.|..+.. .....|. +++.++++++ ++.+|++++++
T Consensus 106 ---~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~i~~~~~~~~~~d~~~l~~ 172 (412)
T PTZ00433 106 ---NVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYET--------VCKAYGI--EMRFYNCRPEKDWEADLDEIRR 172 (412)
T ss_pred ---hEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHH--------HHHHcCC--EEEEEecCccccCcCCHHHHHH
Confidence 56678887 99999999999999999999998755421 2334454 5666666543 57899999999
Q ss_pred HhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCC---CC--cccEEEeccccc
Q 009673 246 TAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK--YCDVVTTTTHKS 315 (529)
Q Consensus 246 ~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~--~aDiv~~S~hK~ 315 (529)
.+++ ++++|++++|+||+ .. ++++|.++|+++|++||+|+++ ..+.+.+....+ +. ..-+++.|++|+
T Consensus 173 ~~~~-~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~ 250 (412)
T PTZ00433 173 LVDD-RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIY-AGMVFNGATFTSVADFDTTVPRVILGGTAKN 250 (412)
T ss_pred Hhcc-CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccc-cccccCCCCccchhhccCCCceEEEccchhh
Confidence 8877 89999999999987 23 5788899999999999999984 455543321111 11 123778999997
Q ss_pred c--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-
Q 009673 316 L--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE- 392 (529)
Q Consensus 316 l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~- 392 (529)
+ +|.|.||+++.++.....++.+.+....... .+.+...+. +++.++.......+++..+++.++++.+.+.|++
T Consensus 251 ~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~q~-a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 328 (412)
T PTZ00433 251 LVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLV-CGPCSVVQA-ALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGEC 328 (412)
T ss_pred cCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhcc-CCCChHHHH-HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5 8899999997321000014555544322211 223233232 2333443211122466777888889999999987
Q ss_pred cCcEEecCCCCCceEEEccCCC---CC-cHHHHHHh-HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673 393 LGYKLVSGGSDNHLVLVDLRPM---GI-DGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 467 (529)
Q Consensus 393 ~G~~v~~~gt~~~~~~v~~~~~---~i-~~~~~~~~-L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~ 467 (529)
.|+.+..+ ..+.++|+.+... ++ +..++.+. ++++||.+. ||.... .++++||++. ..+++++
T Consensus 329 ~~~~~~~p-~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~f~-~~~~iRis~~------~~~e~l~ 396 (412)
T PTZ00433 329 IGLSPTMP-RGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVL----PGEIFH-MPGFTRLTIS------RPVEVLR 396 (412)
T ss_pred CCCcccCC-CeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEe----CccccC-CCCeEEEEec------CCHHHHH
Confidence 47765543 2345667766421 12 34455444 467899994 444321 2579999863 2378888
Q ss_pred HHHHHHHHHHHH
Q 009673 468 AIADFIHEGVEI 479 (529)
Q Consensus 468 ~la~~i~~~~~~ 479 (529)
+..+.|.+++..
T Consensus 397 ~al~~l~~~~~~ 408 (412)
T PTZ00433 397 EAVERIKAFCER 408 (412)
T ss_pred HHHHHHHHHHHH
Confidence 888888887764
No 122
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.5e-22 Score=209.99 Aligned_cols=314 Identities=18% Similarity=0.165 Sum_probs=214.0
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.++|..++|+ +++.+++++...+.. .. .||. ....+++ +.++++++++++ +|.+++|+ +
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~~-~~p~-------~g~~~lr----~~ia~~~~~~~~----~i~~t~G~~~ 92 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDE-LA-LYPD-------GYAPELR----TKVAKHLGVDEE----QLLFGAGLDE 92 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHH-hh-cCCC-------CcHHHHH----HHHHHHhCCCHH----HEEECCCHHH
Confidence 55788777764 578899998766532 11 1221 1123343 667778888764 56678888 8
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
++..++.+++++||+|++++|.|++.. ......|. +++.++++ ++.+|++++++.+++ +++++++++
T Consensus 93 ~l~~~~~~~~~~gd~v~~~~p~y~~~~--------~~~~~~g~--~~~~~~~~--~~~~d~~~l~~~~~~-~~~~v~i~~ 159 (359)
T PRK03158 93 VIQMISRALLNPGTNTVMAEPTFSQYR--------HNAIIEGA--EVREVPLK--DGGHDLEAMLKAIDE-QTKIVWICN 159 (359)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCHHHHH--------HHHHHcCC--eEEEEecC--CCCcCHHHHHHhcCC-CCCEEEEeC
Confidence 888888899999999999999775432 12233454 55566665 467999999998877 899999888
Q ss_pred CCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCCC-----cccEEEecccccc--cCCCCeEEEeeC
Q 009673 260 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-----YCDVVTTTTHKSL--RGPRGGMIFFKK 328 (529)
Q Consensus 260 s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~~-----~aDiv~~S~hK~l--~GprgG~i~~~~ 328 (529)
|+||+ ..+.+++.++++. +|+++|+|++|. .+...+..+.++. ...+++.|++|++ +|.|.||+++++
T Consensus 160 p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 238 (359)
T PRK03158 160 PNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYY-EYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE 238 (359)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchH-hhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH
Confidence 99997 6788999998887 599999999954 3333222222111 1347889999987 689999999987
Q ss_pred CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 407 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~ 407 (529)
++.+.+.....+ .+.+...+.+ +..+++ ... .++..+.+.++++.+.+.|.+.|+.+..++ ..++
T Consensus 239 ------~~~~~~~~~~~~--~~~~~~~q~~-~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--g~~i 304 (359)
T PRK03158 239 ------ELIEKLNIARPP--FNTTRIAQYA-AIAALE---DQAFLKECVEKNAEGLEQYYAFCKEYGLFYYPSQ--TNFI 304 (359)
T ss_pred ------HHHHHHHHhcCC--CCCCHHHHHH-HHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCCeeCCCc--CcEE
Confidence 677776654332 2333333333 233443 223 355666677788888888888888776532 4567
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
|+++. .+..++.+.|.++||.+. ||+... .+++|||++. +.+|++++.+.|+++
T Consensus 305 ~~~~~---~~~~~~~~~l~~~gv~v~----~g~~f~-~~~~iRi~~~-------~~~~~~~l~~al~~~ 358 (359)
T PRK03158 305 FVDTG---RDANELFEALLKKGYIVR----SGAALG-FPTGVRITIG-------LKEQNDKIIELLKEL 358 (359)
T ss_pred EEECC---CCHHHHHHHHHHCCeEEe----eCCCCC-CCCeEEEecC-------CHHHHHHHHHHHHHh
Confidence 77663 356677777778999995 443321 2578999863 479999999999875
No 123
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.91 E-value=5.5e-22 Score=209.32 Aligned_cols=328 Identities=19% Similarity=0.215 Sum_probs=212.6
Q ss_pred EecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 009673 107 LIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYG-GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (529)
Q Consensus 107 L~asen~~----~~~V~eal~~~l~~~y~~G~p~~r~~~-g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~ 181 (529)
...|.||+ +|.|++++...+. +|..+..++|.+. ..+...++| +.+++++|.+. .+.++||++||
T Consensus 50 ~~~s~dylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~g~~~~~~~l~----~~la~~~g~~~-----~~~~~sG~~an 119 (407)
T PRK09064 50 VWCSNDYLGMGQHPKVIEAMIEALD-RCGAGAGGTRNISGTNHYHVELE----RELADLHGKEA-----ALVFTSGYVSN 119 (407)
T ss_pred EEECCCCcCCCCCHHHHHHHHHHHH-HcCCCCCCcCcCccCHHHHHHHH----HHHHHHhCCCc-----EEEECcHHHHH
Confidence 34566653 7899999987764 4555555555443 344555665 67788888643 45679999999
Q ss_pred HHHHHhhcC--CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEE
Q 009673 182 FEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLII 256 (529)
Q Consensus 182 ~~~l~all~--pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---~~pklIi 256 (529)
..++..+.. +++.|+.....|.+.+. .+...+. +...++ ..|++++++.++. .++++|+
T Consensus 120 ~~ai~~l~~~~~~~~i~~~~~~h~s~~~--------~~~~~~~--~~~~~~------~~d~~~le~~l~~~~~~~~~~v~ 183 (407)
T PRK09064 120 DATLSTLAKLIPDCVIFSDELNHASMIE--------GIRRSRC--EKHIFR------HNDVAHLEELLAAADPDRPKLIA 183 (407)
T ss_pred HHHHHHHhCCCCCCEEEEeCcchHHHHH--------HHHHcCC--cEEEEC------CCCHHHHHHHHHhccCCCCeEEE
Confidence 988887754 78777766554433221 1222333 222332 2478888887763 2678888
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccc-c--cc-CCCC-CcccEEEecccccccCCCCeEEEeeCC
Q 009673 257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VV-ADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (529)
Q Consensus 257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~--~~-~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~ 329 (529)
++++.+++ ..|+++|.++|+++|++|++|++|..|.... + .. ...+ ...|++++|++|++ |+.||++++++
T Consensus 184 ~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~-g~~GG~~~~~~- 261 (407)
T PRK09064 184 FESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAF-GVMGGYIAGSA- 261 (407)
T ss_pred EeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhh-hccCceEecCH-
Confidence 88666553 6799999999999999999999998775421 1 10 0111 24589999999998 56789999887
Q ss_pred CcchhHHHhhhcccccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673 330 PVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~ 408 (529)
++.+.+.....+.. ..+.+....++...+++.+... ....+++.++++++.+.|.+.|++++.+ .++++.
T Consensus 262 -----~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~iv~ 332 (407)
T PRK09064 262 -----ALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAAGIPVMPN--ESHIVP 332 (407)
T ss_pred -----HHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCCCC--CCCEEE
Confidence 66665543222221 2222333334444567765432 3446778899999999999989887653 245555
Q ss_pred EccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 409 VDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 409 v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+.+.. ..+..++.+.| ++.||.+.....|.. +.+.+.+||+.+.. ++++|++++++.|+++++
T Consensus 333 i~~~~-~~~~~~l~~~L~~~~gi~v~~~~~p~~--~~~~~~lRis~~~~----~t~edi~~l~~~l~~~~~ 396 (407)
T PRK09064 333 VMVGD-PEKCKKASDMLLEEHGIYVQPINYPTV--PRGTERLRITPTPF----HTDEMIDHLVEALVEVWA 396 (407)
T ss_pred EEeCC-HHHHHHHHHHHHHhCCEEEeeECCCCC--CCCCceEEEEeCCC----CCHHHHHHHHHHHHHHHH
Confidence 54431 12345566665 567999976433321 22346799997654 458999999999998875
No 124
>PLN02721 threonine aldolase
Probab=99.91 E-value=5.1e-22 Score=205.22 Aligned_cols=323 Identities=18% Similarity=0.167 Sum_probs=204.2
Q ss_pred eeEecCCC-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673 105 LELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (529)
Q Consensus 105 i~L~asen-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~ 183 (529)
++|..+++ ++++.+++++...... . ...||. +..+++| +.+++++|.+. .+.+++|++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~a~~~~~~~-----~-~~~~~~--~~~~~l~----~~la~~~~~~~-----~~~~~~Gs~a~~~ 70 (353)
T PLN02721 8 VDLRSDTVTKPTDAMRAAMANAEVD-----D-DVLGYD--PTALRLE----EEMAKIFGKEA-----ALFVPSGTMGNLI 70 (353)
T ss_pred hhhhcccccCCCHHHHHHHHhccCC-----C-cccCCC--HHHHHHH----HHHHHHhCCce-----eEEecCccHHHHH
Confidence 55655554 4678899998642100 1 112222 3355666 66788899874 2445789988888
Q ss_pred HHHhhcC-CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh------cCCcEEE
Q 009673 184 VYTAILK-PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL------FRPKLII 256 (529)
Q Consensus 184 ~l~all~-pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~------~~pklIi 256 (529)
++.++++ |||+|++.++.|.+.+..+. .....|. +++.++.+ +++.+|+|++++.+++ .++++|+
T Consensus 71 ~l~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v~ 142 (353)
T PLN02721 71 SVLVHCDVRGSEVILGDNSHIHLYENGG-----ISTLGGV--HPRTVKNN-EDGTMDLDAIEAAIRPKGDDHFPTTRLIC 142 (353)
T ss_pred HHHHHccCCCCeEEEcCccceehhcccc-----hhhhcCc--eeEecCCC-cCCCcCHHHHHHHHHhccCCCCCcceEEE
Confidence 8888887 99999999987632221000 1223343 66666665 4578999999999973 2788888
Q ss_pred EcC-CCCCC--CCC---HHHHHHHHHHhCCEEEEeccccccccc-ccccCCCC-CcccEEEecccccccCCCCeEEEeeC
Q 009673 257 AGA-SAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVA-ASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKK 328 (529)
Q Consensus 257 ~~~-s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~-~~~~~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~ 328 (529)
++. +++|+ ..+ +++|.++|+++|+++++|++|..+... .+..+..+ .++|.++.|+||++++|.||+++.++
T Consensus 143 l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~ 222 (353)
T PLN02721 143 LENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGSK 222 (353)
T ss_pred EeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecCH
Confidence 864 56654 344 789999999999999999997654321 12111111 26788899999999887766666666
Q ss_pred CCcchhHHHhhhcccccCCCCCCChH-HHHHHHH-HHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEE-ecCCCCC
Q 009673 329 DPVLGVELESAINNAVFPGLQGGPHN-HTIGGLA-VCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKL-VSGGSDN 404 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~~p~~~g~p~~-~~iaala-~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v-~~~gt~~ 404 (529)
++.+.+...... ..+++.. ...++.+ .+++. +.+..++..++++.+.+.|++. |+.+ +.+ ...
T Consensus 223 ------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~ 289 (353)
T PLN02721 223 ------SFIRKAKRLRKT-LGGGMRQVGVLAAAALVALQE-----NVPKLEDDHKKAKLLAEGLNQIKGLRVNVAA-VET 289 (353)
T ss_pred ------HHHHhHHHHHHh-cCCCeehhHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhCCCcEEecCC-ccc
Confidence 565554332111 1112111 1111111 12322 2223455567788999999885 7765 332 234
Q ss_pred ceEEEccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 405 HLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 405 ~~~~v~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+++++++.. .+.+...+.+.|.++||.+.. + .+.+||++++.. ++++|+++++++|++++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~----~-----~~~~lR~~~~~~----~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 290 NIVYFDITDGSRITAEKLCKSLEEHGVLLMP----G-----NSSRIRVVTHHQ----ISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred eEEEEEccCCccccHHHHHHHHHhCCcEEec----C-----CCceEEEEecCc----CCHHHHHHHHHHHHHHhh
Confidence 566666643 114567888889999999953 3 256899987533 468999999999988653
No 125
>PLN02231 alanine transaminase
Probab=99.91 E-value=6.6e-22 Score=213.94 Aligned_cols=343 Identities=15% Similarity=0.126 Sum_probs=214.6
Q ss_pred cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHH
Q 009673 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN 181 (529)
Q Consensus 103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~ 181 (529)
+.|++.+++...|..+++.....+.+..... .-.|+...-..++.+.+.+++.+..|.+.+. .+|.+|+|+ +|+
T Consensus 130 ~~i~~~~~~~~fp~~~i~~a~~~l~~~~~~~---~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~p--e~I~iT~Ga~~ai 204 (534)
T PLN02231 130 SLLDKSETHGLFSADAIERAWQILDQIPGRA---TGAYSHSQGIKGLRDAIAAGIEARDGFPADP--NDIFLTDGASPAV 204 (534)
T ss_pred ccCCCCCccccCCHHHHHHHHHHHHhcCCcc---ccCcCCCCCcHHHHHHHHHHHHhccCCCCCc--ccEEEeCCHHHHH
Confidence 4466655555566777777766664322100 0013323334566666678888777765332 367789998 899
Q ss_pred HHHHHhhc-CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhc-----CCcE
Q 009673 182 FEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-----RPKL 254 (529)
Q Consensus 182 ~~~l~all-~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~-----~pkl 254 (529)
..++.+++ .|||.|++++|.|..+. ..+...|. ++++++++++ +|.+|+++|++.+++. ++|+
T Consensus 205 ~~~~~~l~~~~gd~Vli~~P~Y~~y~--------~~~~~~g~--~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ 274 (534)
T PLN02231 205 HMMMQLLIRSEKDGILCPIPQYPLYS--------ASIALHGG--TLVPYYLDEATGWGLEISELKKQLEDARSKGITVRA 274 (534)
T ss_pred HHHHHHhccCCCCEEEEeCCCChhHH--------HHHHHcCC--EEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEE
Confidence 99999998 48999999999876542 13344554 6777778754 4799999999988652 6888
Q ss_pred EEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccc-ccCCCCC---------ccc---EEEecccccc
Q 009673 255 IIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS-VVADPFK---------YCD---VVTTTTHKSL 316 (529)
Q Consensus 255 Ii~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~-~~~~~~~---------~aD---iv~~S~hK~l 316 (529)
|++++|+||+ .. .+++|.++|+++|++||+|++ |..+++.+ ....++. .-| +++.|++|.+
T Consensus 275 ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEv-Y~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~ 353 (534)
T PLN02231 275 LVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEV-YQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGY 353 (534)
T ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcc-chhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCccc
Confidence 8888899997 33 577888999999999999998 45555532 1111110 012 5668999964
Q ss_pred ---cCCCCeEEEee--CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh--cCchHH-------HHHHHHHHH
Q 009673 317 ---RGPRGGMIFFK--KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSPEFK-------VYQNKVVSN 382 (529)
Q Consensus 317 ---~GprgG~i~~~--~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~--~~~~~~-------~~~~~i~~~ 382 (529)
+|+|+||+++. ++ ++.+.+.+..... .+++...++++ ..+++.- ....|+ +..+.+.++
T Consensus 354 ~g~pGlRiGy~~~~~~~~-----~l~~~l~k~~~~~-~~s~~~~Q~~~-~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r 426 (534)
T PLN02231 354 YGECGKRGGYMEVTGFTS-----DVREQIYKVASVN-LCSNISGQILA-SLVMSPPKPGDESYESYMAEKDGILSSLARR 426 (534)
T ss_pred ccCCccceEEEEEecCCH-----HHHHHHHHHHhhh-cCCChHHHHHH-HHHhCCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 69999999863 22 5666654432211 22323333332 2233210 011232 235678888
Q ss_pred HHHHHHHHHhc-CcEEecCCCCCceEEEccCC--CCC---------cHHH-HHHhHhcCCeEEcCCCCCCCCC-C-CCCC
Q 009673 383 CRALASRLVEL-GYKLVSGGSDNHLVLVDLRP--MGI---------DGAR-VEKILDMASITLNKNSVPGDKS-A-LVPG 447 (529)
Q Consensus 383 a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~--~~i---------~~~~-~~~~L~~~GI~v~~~~~Pg~~~-~-~~~~ 447 (529)
++.+.+.|++. |+.+..+ ..++++|+++.. ..+ +... +..+|++.||.+ +||... . .+..
T Consensus 427 ~~~l~~~L~~~~gi~~~~p-~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~v----vPGs~Fg~~~g~~ 501 (534)
T PLN02231 427 AKTLEDALNSLEGVTCNKA-EGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVV----VPGSGFGQVPGTW 501 (534)
T ss_pred HHHHHHHHhcCCCceecCC-CeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEE----eCCcccCCCCCCC
Confidence 99999999885 8887654 235666645531 111 1222 355678899999 566542 1 1234
Q ss_pred eEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 448 GIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 448 ~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
++|+++. .+++++++.++.|.+.++.
T Consensus 502 ~~Rit~~------~~~e~l~eal~RL~~~~~~ 527 (534)
T PLN02231 502 HFRCTIL------PQEDKIPAIVSRLTEFHKS 527 (534)
T ss_pred eEEEEeC------CCHHHHHHHHHHHHHHHHH
Confidence 6999862 3478888888888776653
No 126
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.91 E-value=2.3e-21 Score=204.25 Aligned_cols=343 Identities=18% Similarity=0.131 Sum_probs=211.2
Q ss_pred hcceeEecCCC------CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC
Q 009673 102 FKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL 175 (529)
Q Consensus 102 ~~~i~L~asen------~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~ 175 (529)
.+.++|..++. ++++.+++++...+...+..+|+. ..| ..++++.+.+++...++.+.+. -+|.++
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~---~~g---~~~lr~~ia~~l~~~~~~~~~~--~~ii~t 102 (403)
T TIGR01265 31 KPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAP---SVG---ALAAREAVAEYLSSDLPGKLTA--DDVVLT 102 (403)
T ss_pred CCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCC---CCC---CHHHHHHHHHHHHhhcCCCCCH--HHEEEe
Confidence 46788876653 467899999987775443223322 112 2344433334433333332111 245567
Q ss_pred ChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCc
Q 009673 176 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPK 253 (529)
Q Consensus 176 sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pk 253 (529)
+|+ +|+..++.+++++||+|++++|.|.... ......|. +++.++++++ ++.+|++++++.+.+ +++
T Consensus 103 ~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~ 171 (403)
T TIGR01265 103 SGCSQAIEICIEALANPGANILVPRPGFPLYD--------TRAAFSGL--EVRLYDLLPEKDWEIDLDGLEALADE-KTV 171 (403)
T ss_pred cChHHHHHHHHHHhCCCCCEEEEeCCCchhHH--------HHHHHcCC--EEEEecCCcccCCccCHHHHHHHhCc-Ccc
Confidence 775 9999999999999999999998765321 12233454 5666666433 578999999998876 789
Q ss_pred EEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-cc-cEEEecccccc--cCCCC
Q 009673 254 LIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YC-DVVTTTTHKSL--RGPRG 321 (529)
Q Consensus 254 lIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~a-Div~~S~hK~l--~Gprg 321 (529)
++++++|+||+ .. ++++|.++|+++|+++|+|++ |..+.+.+....++ . .. -++++|++|++ +|.|.
T Consensus 172 ~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~-y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRi 250 (403)
T TIGR01265 172 AIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEI-YGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRL 250 (403)
T ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcc-ccccccCCCCccchhhhccCCcEEEEeecccccCCCcceE
Confidence 99998888887 33 488999999999999999998 44554433111121 1 11 26779999984 88999
Q ss_pred eEEEeeCCC-cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEec
Q 009673 322 GMIFFKKDP-VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 399 (529)
Q Consensus 322 G~i~~~~~~-~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~ 399 (529)
||+++++.. ....++.+.+...... ..+ ++.....++..++.......+++..+++.++++.+.+.|+.. |+.+..
T Consensus 251 G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 328 (403)
T TIGR01265 251 GWIIIHDPHGIFRDTVLQGLKNLLQR-ILG-PATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPK 328 (403)
T ss_pred EEEEEeCchhhhHHHHHHHHHHHhhh-hcC-CChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecC
Confidence 999985320 0000133333222111 112 223333344445543211234667788888999999999875 776543
Q ss_pred CCCCCceEEEccCCCC----CcHHHHHH-hHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673 400 GGSDNHLVLVDLRPMG----IDGARVEK-ILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 474 (529)
Q Consensus 400 ~gt~~~~~~v~~~~~~----i~~~~~~~-~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~ 474 (529)
+ ..+.++|+++.... .+..++.+ +++++||.+ .||.... .+++|||++. ..++.+++..+.|.
T Consensus 329 p-~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v----~pg~~f~-~~~~iRis~~------~~~~~l~~~l~~l~ 396 (403)
T TIGR01265 329 P-EGAMYLMVKLELELFPEIKDDVDFCEKLVREESVIC----LPGSAFG-LPNWVRITIT------VPESMLEEACSRIK 396 (403)
T ss_pred C-CceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEE----eCccccC-CCCeEEEEec------CCHHHHHHHHHHHH
Confidence 3 23567788775321 24555544 468899999 4554321 3678999964 23667777777776
Q ss_pred HHHH
Q 009673 475 EGVE 478 (529)
Q Consensus 475 ~~~~ 478 (529)
++++
T Consensus 397 ~~~~ 400 (403)
T TIGR01265 397 EFCE 400 (403)
T ss_pred HHHH
Confidence 6654
No 127
>PRK09265 aminotransferase AlaT; Validated
Probab=99.91 E-value=1.4e-21 Score=206.10 Aligned_cols=337 Identities=14% Similarity=0.062 Sum_probs=207.4
Q ss_pred cceeEecCCC-----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc--CCCCCCCceeeecC
Q 009673 103 KSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF--NLDENKWGVNVQPL 175 (529)
Q Consensus 103 ~~i~L~asen-----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~--g~~~~~~~~~V~~~ 175 (529)
+.++|..++. .+++.+.+++...+... .+|+.. .| ..++.+...+++.... +++++ +|.++
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~--~~Y~~~---~G---~~~lr~~ia~~~~~~~~~~~~~~----~i~~t 101 (404)
T PRK09265 34 KILKLNIGNPAPFGFEAPDEILRDVIRNLPTA--QGYSDS---KG---LFSARKAIMQYYQQKGIPDVDVD----DIYIG 101 (404)
T ss_pred CeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC--CCCCCC---CC---cHHHHHHHHHHHhccCCCCCCcc----cEEEe
Confidence 5688876432 26788888887655422 234331 12 2344433334443322 45554 56678
Q ss_pred ChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCc
Q 009673 176 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPK 253 (529)
Q Consensus 176 sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pk 253 (529)
+|+ +++..++.++++|||+|++++|.|..+.. .+...|. +++.++++.+ ++.+|++++++.+.+ +++
T Consensus 102 ~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~v~~~~~~~~~~~~d~~~l~~~~~~-~~~ 170 (404)
T PRK09265 102 NGVSELIVMAMQALLNNGDEVLVPAPDYPLWTA--------AVSLSGG--KPVHYLCDEEAGWFPDLDDIRSKITP-RTK 170 (404)
T ss_pred CChHHHHHHHHHHhCCCCCEEEEeCCCCcChHH--------HHHHcCC--EEEEEecccccCCCCCHHHHHHhccc-cce
Confidence 888 78888999999999999999998764321 2223443 5555555533 567999999999876 799
Q ss_pred EEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-ccc-EEEecccccc--cCCCC
Q 009673 254 LIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCD-VVTTTTHKSL--RGPRG 321 (529)
Q Consensus 254 lIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~aD-iv~~S~hK~l--~Gprg 321 (529)
+|++++|+||+ ..+ +++|.++|+++|+++|+|+++ ..+.+.+....++ . ... +++.|++|++ +|.|.
T Consensus 171 ~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRi 249 (404)
T PRK09265 171 AIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIY-DKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRV 249 (404)
T ss_pred EEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhh-hhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccce
Confidence 99988899887 566 888999999999999999984 3544333211111 1 112 5679999986 78999
Q ss_pred eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH---HHHHHHHHHHHHHHHHhc-CcEE
Q 009673 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY---QNKVVSNCRALASRLVEL-GYKL 397 (529)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~---~~~i~~~a~~l~~~L~~~-G~~v 397 (529)
||++.+.......++.+.+..... ...+.+...+. ++..+|.. ...++.+ .+++.++++.+.+.|++. |+.+
T Consensus 250 G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~-~~~~~l~~--~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~ 325 (404)
T PRK09265 250 GWMVLSGPKKHAKGYIEGLDMLAS-MRLCANVPAQH-AIQTALGG--YQSINELILPGGRLYEQRDRAWELLNAIPGVSC 325 (404)
T ss_pred EEEEEeCchHHHHHHHHHHHHHhc-cccCCCcHHHH-HHHHHhcC--chhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 999974321000013333321111 11122222233 33334431 1122222 246677788888888774 7765
Q ss_pred ecCCCCCceEEEccCCCC---C-cHHHHHHhHhcCCeEEcCCCCCCCCC-CCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673 398 VSGGSDNHLVLVDLRPMG---I-DGARVEKILDMASITLNKNSVPGDKS-ALVPGGIRIGSPAMTTRGFSEKEFVAIADF 472 (529)
Q Consensus 398 ~~~gt~~~~~~v~~~~~~---i-~~~~~~~~L~~~GI~v~~~~~Pg~~~-~~~~~~iRig~~~~tt~g~~~~d~~~la~~ 472 (529)
..+ ..+.++|+++.... . +.+.+.+.|.++||.+. ||... ...++++||++. .+++++++..+.
T Consensus 326 ~~p-~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~----pg~~F~~~~~~~~Ri~~~------~~~e~l~~~l~r 394 (404)
T PRK09265 326 VKP-KGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLV----QGTGFNWPEPDHFRIVTL------PRVDDLEEAIGR 394 (404)
T ss_pred cCC-CcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEE----CchhhCCCCCCeEEEEeC------CCHHHHHHHHHH
Confidence 544 23566777775321 1 23457888999999994 44431 223578999972 347899999999
Q ss_pred HHHHHH
Q 009673 473 IHEGVE 478 (529)
Q Consensus 473 i~~~~~ 478 (529)
|.++++
T Consensus 395 l~~~l~ 400 (404)
T PRK09265 395 IGRFLS 400 (404)
T ss_pred HHHHHH
Confidence 988775
No 128
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.8e-22 Score=215.84 Aligned_cols=344 Identities=15% Similarity=0.158 Sum_probs=209.5
Q ss_pred cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCC-ceeeecCChH-
Q 009673 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKW-GVNVQPLSGS- 178 (529)
Q Consensus 103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~-~~~V~~~sGs- 178 (529)
+.|+|..++. .+|+.|.++......+. ||.. .|. ....|+++...+.+.++...... ..+|.+|+|+
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~~~~~~~~----Y~~~---~g~--~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~ 171 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELVDGIIGDN----YPVP---DRM--LKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGT 171 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHHhcCC----CCCC---CCC--HHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHH
Confidence 4577777663 35677777554443222 3321 111 23334444445444433321100 0267778887
Q ss_pred HHHHHHHHh-----hcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCC
Q 009673 179 PANFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRP 252 (529)
Q Consensus 179 ~A~~~~l~a-----ll~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~p 252 (529)
+|+..++.+ +++|||+|++++|.|..+.. .+.+.|...++++++.+++ +|.+|.++|++++++ ++
T Consensus 172 ~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~--------~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~-~t 242 (527)
T PRK09275 172 AAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLE--------IPELPRYDLEVVHINADEENEWQYPDSELEKLRDP-SI 242 (527)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHH--------HHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC-CC
Confidence 888888876 68999999999997754421 2334454457777776544 489999999998877 89
Q ss_pred cEEEEcCCCCCC--CCC---HHHHHHHHHH--hCCEEEEecccccccccccccCCCCC---cccEEEecccccc--cCCC
Q 009673 253 KLIIAGASAYPR--DFD---YPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL--RGPR 320 (529)
Q Consensus 253 klIi~~~s~~p~--~~d---~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~~---~aDiv~~S~hK~l--~Gpr 320 (529)
|+|++++|+||+ ..+ +++|.++|++ ++++||+|+++. .+.. . ..+.+. .--|++.|++|++ +|||
T Consensus 243 kai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~-~f~~-~-~~s~~~~~~~~~I~v~SfSK~f~mtG~R 319 (527)
T PRK09275 243 KALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYG-TFVD-D-FRSLFAVLPYNTILVYSFSKYFGATGWR 319 (527)
T ss_pred CEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCCh-hhcc-c-ccCHHHhCCCCEEEEeehhhhccCcHhH
Confidence 999999999997 444 7788888965 499999999843 3432 1 111111 2348889999986 8999
Q ss_pred CeEEEeeCCCcchhHHHhhh--------------------------------cccccCCCCCCChHHHHH-H---HHHHH
Q 009673 321 GGMIFFKKDPVLGVELESAI--------------------------------NNAVFPGLQGGPHNHTIG-G---LAVCL 364 (529)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i--------------------------------~~~~~p~~~g~p~~~~ia-a---la~al 364 (529)
.||++++++.. ..++.+.+ .........|.+...+.+ + +..++
T Consensus 320 lG~i~~~~~~v-~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all 398 (527)
T PRK09275 320 LGVIALHEDNV-FDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALL 398 (527)
T ss_pred HhhhhcCchhH-HHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence 99999987410 00011111 111111112333344443 3 22223
Q ss_pred HHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec-CCCCCceEEEccCCCC---------------CcH-HHHHHhHhc
Q 009673 365 KHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-GGSDNHLVLVDLRPMG---------------IDG-ARVEKILDM 427 (529)
Q Consensus 365 ~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~-~gt~~~~~~v~~~~~~---------------i~~-~~~~~~L~~ 427 (529)
+. .....++.++.+.++++.+.+.| |+.+.. +....++.++|+...+ .+. +.+.+++++
T Consensus 399 ~~-~~~~~~~~~~~~~~Rr~~l~~~L---g~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e 474 (527)
T PRK09275 399 DE-EDAYKKAMKDIIRRRYKALYEGL---GLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEE 474 (527)
T ss_pred hC-chHHHHHHHHHHHHHHHHHHHHc---CCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhc
Confidence 32 11223566777788888787776 443321 2223567788875311 133 345677789
Q ss_pred CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHH
Q 009673 428 ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITL 481 (529)
Q Consensus 428 ~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~ 481 (529)
+||.+ +||......++++||++.. .+++++.++.+.|.+++....
T Consensus 475 ~gV~v----~PG~~Fg~~~~~vRis~a~-----~~~~~~~~~~~rl~~~l~~y~ 519 (527)
T PRK09275 475 TGVVL----LPGGGFGGPEWSVRVSLAN-----LNEEDYAKIGKAIRKLLDEYY 519 (527)
T ss_pred CCEEE----eCchhhCCCCCeEEEEEec-----CCHHHHHHHHHHHHHHHHHHH
Confidence 99999 6765521135789999743 457999999999999887654
No 129
>PLN02822 serine palmitoyltransferase
Probab=99.91 E-value=9.1e-22 Score=210.94 Aligned_cols=337 Identities=15% Similarity=0.170 Sum_probs=219.0
Q ss_pred cceeEecCCC---CCcHHHHHHHhhhhhccCCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673 103 KSLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (529)
Q Consensus 103 ~~i~L~asen---~~~~~V~eal~~~l~~~y~~G~p~~r~-~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs 178 (529)
+.|++..+.. ..++++++++...+ .+|..|+.+.|. |+..+...++| +.++++++.+. .|..++|.
T Consensus 110 ~~id~~s~~~lgl~~~~~i~ea~~~al-~~~G~g~~g~r~~yg~~~~~~~Le----e~La~~~~~~~-----~i~~s~G~ 179 (481)
T PLN02822 110 DVVNFASANYLGLIGNEKIKESCTSAL-EKYGVGSCGPRGFYGTIDVHLDCE----TKIAKFLGTPD-----SILYSYGL 179 (481)
T ss_pred eEEEeECCCcCCCCCCHHHHHHHHHHH-HHhCCCCcccCccccCHHHHHHHH----HHHHHHhCCCC-----EEEECCHH
Confidence 4577654321 25899999998877 456667777765 45455555555 77889999764 35567887
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh--------c
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--------F 250 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~--------~ 250 (529)
.++.+++.+++++||.|++....|.+.. ..+.+.+. +++.++.+ |.++++..+++ .
T Consensus 180 ~a~~sai~a~~~~gd~Ii~d~~~H~s~~--------~~~~ls~~--~~~~~~~n------d~~~l~~~l~~~~~~~~~~~ 243 (481)
T PLN02822 180 STIFSVIPAFCKKGDIIVADEGVHWGIQ--------NGLYLSRS--TIVYFKHN------DMESLRNTLEKLTAENKRKK 243 (481)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCccHHHH--------HHHHHcCC--eEEEECCC------CHHHHHHHHHHHhhhhcccC
Confidence 7889999999999999997655443221 12334454 56666543 33444433321 1
Q ss_pred CC-cEEEEcCC--CCCCCCCHHHHHHHHHHhCCEEEEecccccccccc-c--cc-CCCC--CcccEEEecccccccCCCC
Q 009673 251 RP-KLIIAGAS--AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VV-ADPF--KYCDVVTTTTHKSLRGPRG 321 (529)
Q Consensus 251 ~p-klIi~~~s--~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~--~~-~~~~--~~aDiv~~S~hK~l~Gprg 321 (529)
++ ++|+++.. +.+...|+++|+++|++||+++|+|++|..|.... | .. ...+ ...|++++|++|++ |..|
T Consensus 244 ~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKal-g~~G 322 (481)
T PLN02822 244 KLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHAL-ATEG 322 (481)
T ss_pred CCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhh-hhCC
Confidence 34 57777643 34448899999999999999999999998776532 1 10 0111 24689999999998 5677
Q ss_pred eEEEeeCCCcchhHHHhhhcccccCCCCCC--ChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEe
Q 009673 322 GMIFFKKDPVLGVELESAINNAVFPGLQGG--PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV 398 (529)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~--p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~ 398 (529)
||+++++ ++.+.+......+..++ |...+.+++ .+|+... ...+..+++.++++.+.+.|++. |+.+.
T Consensus 323 G~i~g~~------~ii~~~~~~~~~~~fsa~lPp~~~~Aa~-~aL~~l~--~~~~~~~~l~~~~~~l~~~L~~~~g~~~~ 393 (481)
T PLN02822 323 GFCTGSA------RVVDHQRLSSSGYVFSASLPPYLASAAI-TAIDVLE--DNPSVLAKLKENIALLHKGLSDIPGLSIG 393 (481)
T ss_pred eEEEcCH------HHHHHHHhcCCceeeccccCHHHHHHHH-HHHHHHH--hCHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 9999987 67666654333333333 344444444 3676543 23567889999999999999884 88775
Q ss_pred cCCCCCceEEEccCCC-CC---c---HHHHHHh-HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673 399 SGGSDNHLVLVDLRPM-GI---D---GARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 470 (529)
Q Consensus 399 ~~gt~~~~~~v~~~~~-~i---~---~~~~~~~-L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la 470 (529)
.+ ..++++++.+... +. + ..++.+. |+++||.+.....|.-.....+.++||++.+ +++++|+++++
T Consensus 394 ~~-~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~----~~t~edI~~~~ 468 (481)
T PLN02822 394 SN-TLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSA----GHTESDILKAS 468 (481)
T ss_pred CC-CCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECC----CCCHHHHHHHH
Confidence 43 2456676766431 10 1 1345544 4689999975322321111124579997653 36799999999
Q ss_pred HHHHHHHHHH
Q 009673 471 DFIHEGVEIT 480 (529)
Q Consensus 471 ~~i~~~~~~~ 480 (529)
+.|++++...
T Consensus 469 ~~l~~~~~~~ 478 (481)
T PLN02822 469 ESLKRVAASV 478 (481)
T ss_pred HHHHHHHHHH
Confidence 9999887653
No 130
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=4.1e-22 Score=207.38 Aligned_cols=318 Identities=19% Similarity=0.171 Sum_probs=215.8
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.++|..++|+ +++.+++++...+.. + ..|+.. . ..+++ +.+++++|++++ +|.+++|+ +
T Consensus 33 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~~------~-~~~lr----~~ia~~~~~~~~----~i~~t~G~~~ 95 (367)
T PRK02731 33 DIIKLASNENPLGPSPKAIEAIRAAADE-L-HRYPDG------S-GFELK----AALAEKFGVDPE----RIILGNGSDE 95 (367)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC------c-HHHHH----HHHHHHhCcCHH----HEEEcCCHHH
Confidence 56888877765 578899998876532 2 223321 1 13444 567778898764 56678888 7
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
++..++.+++++||+|++.+|.|..+. ......|. +++.++. +++.+|++++++.+++ ++++|++++
T Consensus 96 ~l~~~~~~l~~~gd~vl~~~p~y~~~~--------~~~~~~g~--~~~~~~~--~~~~~~~~~l~~~~~~-~~~~v~l~~ 162 (367)
T PRK02731 96 ILELLARAYLGPGDEVIYSEHGFAVYP--------IAAQAVGA--KPVEVPA--KDYGHDLDAMLAAVTP-RTRLVFIAN 162 (367)
T ss_pred HHHHHHHHhcCCCCEEEEecCCHHHHH--------HHHHHcCC--eEEEecc--cCCCCCHHHHHHHhCC-CCcEEEEeC
Confidence 777788889999999999998764321 11233454 5666665 3578999999999976 899999998
Q ss_pred CCCCC--CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCC---C-c-ccEEEecccccc--cCCCCeEEEeeC
Q 009673 260 SAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPF---K-Y-CDVVTTTTHKSL--RGPRGGMIFFKK 328 (529)
Q Consensus 260 s~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~---~-~-aDiv~~S~hK~l--~GprgG~i~~~~ 328 (529)
++||+ ..+.+++.++++.+ |+++++|++|. .+...+....++ + . -.++++|++|++ +|+|.||+++++
T Consensus 163 p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~ 241 (367)
T PRK02731 163 PNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYA-EYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP 241 (367)
T ss_pred CCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHH-HhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH
Confidence 88887 77899999999875 89999999854 333222111111 1 1 237788999985 688899999987
Q ss_pred CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 407 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~ 407 (529)
++.+.+.....+. +.+...+.+ +..+++ ... .++..+.+.++++.+.+.|++.|+.+..+ ...++
T Consensus 242 ------~~~~~l~~~~~~~--~~~~~~~~~-a~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~g~~~ 307 (367)
T PRK02731 242 ------EIIDALNRVRQPF--NVNSLALAA-AVAALD---DDAFVEKSRALNAEGMAWLTEFLAELGLEYIPS--VGNFI 307 (367)
T ss_pred ------HHHHHHHHccCCC--CCCHHHHHH-HHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC--CceEE
Confidence 6777665543222 222222222 222332 223 36667777888888999998888876543 35677
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
|+++. .+.+..++.+.|.++||.+.....++ .+++|||++. +.+|++++.+.|+++++
T Consensus 308 ~i~~~-~~~~~~~~~~~L~~~gI~v~~~~~~~-----~~~~iRis~~-------~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 308 LVDFD-DGKDAAEAYQALLKRGVIVRPVAGYG-----LPNALRITIG-------TEEENRRFLAALKEFLA 365 (367)
T ss_pred EEECC-CCCCHHHHHHHHHHCCEEEEeCCCCC-----CCCeEEEecC-------CHHHHHHHHHHHHHHHh
Confidence 87773 34567788888888999995432111 2578999963 36899999999988764
No 131
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.91 E-value=7.9e-22 Score=211.68 Aligned_cols=332 Identities=17% Similarity=0.158 Sum_probs=213.9
Q ss_pred CCCCCcHHHHHHHhhhh-hccCCCCC-CCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHH--
Q 009673 110 SENFTSRAVMEAVGSCL-TNKYSEGL-PGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY-- 185 (529)
Q Consensus 110 sen~~~~~V~eal~~~l-~~~y~~G~-p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l-- 185 (529)
....+++.+.+++.+.. ...|+ .| |... .+-..++....++++++++|++. +.+..++|+.+....+
T Consensus 78 ~~~~~~p~i~~~~~~~~~~~~~t-pYq~e~~----sqG~lel~~~~~~~la~l~G~~~----~~l~~~~GA~a~~~~l~~ 148 (481)
T PRK04366 78 CTMKYNPKINEKVARLPGFAELH-PLQPEET----VQGALELMYELQEWLKEITGMDA----VTLQPAAGAHGELTGLLM 148 (481)
T ss_pred cCCCCCHHHHHHHHhCcchhcCC-CCCChhh----hhHHHHHHHHHHHHHHHHhCCCc----eEEEeCcHHHHHHHHHHH
Confidence 34567899999887651 11221 12 1111 11233445567799999999974 4677788875554322
Q ss_pred -H-hhcCCCC----EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 186 -T-AILKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 186 -~-all~pGD----~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
. .++++|| +|+++++.|+.+.. .+...|. +++.++++ +++.+|+++|++.+++ ++++|++++
T Consensus 149 ~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~--------~~~~~G~--~vv~v~~~-~~~~~D~e~L~~~i~~-~t~~V~v~~ 216 (481)
T PRK04366 149 IRAYHEARGDTKRTEVIVPDSAHGTNPA--------SAAMAGF--KVVEIPSN-EDGLVDLEALKAAVGE-DTAALMLTN 216 (481)
T ss_pred HHHHhhccCcCCCCEEEEcCCccHhHHH--------HHHHcCC--EEEEeecC-CCCCcCHHHHHhhccc-CCeEEEEeC
Confidence 2 3467887 99999988865542 2334554 66666665 4689999999999987 899998887
Q ss_pred CCCCC-C-CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccccCCC------CeEEEeeCCC
Q 009673 260 SAYPR-D-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR------GGMIFFKKDP 330 (529)
Q Consensus 260 s~~p~-~-~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~Gpr------gG~i~~~~~~ 330 (529)
|+..+ . .|+++|+++|+++|+++++|++|..++.. .. .+-+ ++|++++++||||.+|. +|+++++++
T Consensus 217 Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g--~~-~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~- 292 (481)
T PRK04366 217 PNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILG--KA-RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE- 292 (481)
T ss_pred CCCccccchHHHHHHHHHHHcCCEEEEEecChhhhcc--cC-CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh-
Confidence 77433 3 48999999999999999999998766432 11 2223 79999999999986543 368888773
Q ss_pred cchhHHHhhhccc-------cc------C-----CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673 331 VLGVELESAINNA-------VF------P-----GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (529)
Q Consensus 331 ~~~~~l~~~i~~~-------~~------p-----~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~ 392 (529)
+.+++... .+ + .-.++.+...+.+.+..+..+..+++++..++...++++|++.|.+
T Consensus 293 -----~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~ 367 (481)
T PRK04366 293 -----LAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKD 367 (481)
T ss_pred -----hHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 33322100 00 0 0001111112222222344444556777788889999999999988
Q ss_pred cCcEEecCCCCCceEEEcc---CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673 393 LGYKLVSGGSDNHLVLVDL---RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 469 (529)
Q Consensus 393 ~G~~v~~~gt~~~~~~v~~---~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~l 469 (529)
. +.+..++...+.++++. ...+++..++.+.|.+.||.+.....|. ...+.+|++....+| ++|++++
T Consensus 368 ~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~----~~~~~l~is~~e~~t----~edid~l 438 (481)
T PRK04366 368 I-YDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPL----IVPEALMIEPTETES----KETLDAF 438 (481)
T ss_pred h-CcccCCCCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCcccccc----ccCCeEEEcccCCCC----HHHHHHH
Confidence 6 55443222223345553 2234567889999999999875332231 125689999877655 7999999
Q ss_pred HHHHHHHHHHH
Q 009673 470 ADFIHEGVEIT 480 (529)
Q Consensus 470 a~~i~~~~~~~ 480 (529)
++.|.++.+..
T Consensus 439 ~~~l~~i~~~~ 449 (481)
T PRK04366 439 IAAMKQIAEEA 449 (481)
T ss_pred HHHHHHHHHHH
Confidence 99999887654
No 132
>PRK09105 putative aminotransferase; Provisional
Probab=99.91 E-value=5.5e-22 Score=206.53 Aligned_cols=311 Identities=16% Similarity=0.127 Sum_probs=211.1
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.+.|..++|+ +|+.+++++...+.. . ..|+. .. .+++. +.+++.+|++++ +|.+++|+ +
T Consensus 44 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~Y~~------~~-~~~Lr----~aia~~~~v~~e----~I~it~Gs~~ 106 (370)
T PRK09105 44 GAVFLNANECPLGPSPAARDAAARSAAL-S-GRYDL------EL-EDDLR----TLFAAQEGLPAD----HVMAYAGSSE 106 (370)
T ss_pred CcEEecCCCCCCCCCHHHHHHHHHHHHH-h-cCCCC------ch-HHHHH----HHHHHHhCcChh----hEEEcCChHH
Confidence 55888888874 589999999876532 1 11221 11 33443 566778899875 56668887 9
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
++..++.++++|||+|++++|.|..+.. .....|. +++.++++ +++.+|++++++. .+ ++++|++++
T Consensus 107 ai~~~~~~l~~~gd~Vli~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~-~~-~~~~v~l~n 173 (370)
T PRK09105 107 PLNYAVLAFTSPTAGLVTADPTYEAGWR--------AADAQGA--PVAKVPLR-ADGAHDVKAMLAA-DP-NAGLIYICN 173 (370)
T ss_pred HHHHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCC--eEEEecCC-CCCCCCHHHHHhc-CC-CCCEEEEeC
Confidence 9999999999999999999998765421 2334554 66666665 3578999999876 34 789999999
Q ss_pred CCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCCC----ccc-EEEecccccc--cCCCCeEEEeeC
Q 009673 260 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKK 328 (529)
Q Consensus 260 s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~~----~aD-iv~~S~hK~l--~GprgG~i~~~~ 328 (529)
|+||+ ..+.+++.++++. +|+++|+|++|. .+.. .++... +.+ +++.|++|++ +|+|.||+++++
T Consensus 174 P~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~-~f~~---~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~ 249 (370)
T PRK09105 174 PNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYI-HFSD---APSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP 249 (370)
T ss_pred CCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchH-Hhcc---CcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCH
Confidence 99997 6777888877754 489999999963 2221 111111 234 6778999986 789999999987
Q ss_pred CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~ 408 (529)
++.+.+... . ....+.. ...+...+|.. ....++..+++.++++.+.+.|++.|+.+..+ ...+++
T Consensus 250 ------~~i~~l~~~-~--~~~~~~~-~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~--~~~f~~ 315 (370)
T PRK09105 250 ------DLLAKLARF-G--HNPLPVP-AAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKKGYKCTPS--QANCFM 315 (370)
T ss_pred ------HHHHHHHhc-C--CCCcCHH-HHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCC--CCcEEE
Confidence 677766553 1 1112222 22222334432 12336667888899999999999888876653 233445
Q ss_pred EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
+++. .+..++.+.|.+.||.+... .+ ..++++||++. ++++++++.+.|++++
T Consensus 316 ~~~~---~~~~~l~~~L~~~gI~v~~~-~~-----~~~~~~Ris~~-------~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 316 VDVK---RPAKAVADAMAKQGVFIGRS-WP-----IWPNWVRVTVG-------SEEEMAAFRSAFAKVM 368 (370)
T ss_pred EeCC---CCHHHHHHHHHHCCcEEecC-CC-----CCCCeEEEEcC-------CHHHHHHHHHHHHHHh
Confidence 6653 35677777777789998322 11 12578999964 3688999999988765
No 133
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.91 E-value=6e-22 Score=205.33 Aligned_cols=318 Identities=14% Similarity=0.101 Sum_probs=205.2
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.++|..++|+ +|+.+++++...+.. . ..||. ....++ ++.++++++++++ +|.+++|+ +
T Consensus 21 ~~i~l~~~~~~~~~p~~~~~a~~~~~~~-~-~~y~~-------~~~~~l----r~~ia~~~~~~~~----~i~it~Ga~~ 83 (356)
T PRK08056 21 QLLDFSANINPLGMPVSLKRAIIDNLDC-A-ERYPD-------VEYRHL----HQALARHHQVPAS----WILAGNGETE 83 (356)
T ss_pred hEEEeccccCCCCCCHHHHHHHHHHHHh-c-ccCcC-------ccHHHH----HHHHHHHhCcChh----hEEECCCHHH
Confidence 45888888885 689999999866542 1 12332 112333 3667788899875 56678888 8
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
++..++.++ .||| +++++|.+..+. ..+...|. +++.++++++ ++.+| +++++.+.+ ++|+|+++
T Consensus 84 ~l~~~~~~l-~~g~-viv~~P~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~~-~~~~~~~~~-~~k~v~l~ 149 (356)
T PRK08056 84 SIFAVVSGL-KPRR-AMIVTPGFAEYR--------RALQQVGC--EIRRYSLREADGWQLT-DAILEALTP-DLDCLFLC 149 (356)
T ss_pred HHHHHHHHh-CCCC-EEEeCCCcHHHH--------HHHHHcCC--eEEEEecccccCCCcc-HHHHHhccC-CCCEEEEe
Confidence 888787776 7887 566666543221 12344555 6667666543 35666 455555654 89999999
Q ss_pred CCCCCC--CCC---HHHHHHHHHHhCCEEEEeccccccccccccc-CCCCC--cccEEEecccccc--cCCCCeEEEeeC
Q 009673 259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKK 328 (529)
Q Consensus 259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~~~--~aDiv~~S~hK~l--~GprgG~i~~~~ 328 (529)
+|+||+ ..+ +++|.++|+++|+++|+|++ |.++...+.. ...+. ...+++.|+||++ +|.|.||+++++
T Consensus 150 ~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~-y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~ 228 (356)
T PRK08056 150 TPNNPTGLLPERQLLQAIAERCKSLNIALILDEA-FIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSD 228 (356)
T ss_pred CCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecc-hhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCC
Confidence 999997 555 77889999999999999998 4444432211 11122 2458889999986 788999999854
Q ss_pred CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchH-HHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCce
Q 009673 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHL 406 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~ 406 (529)
+ ++.+.+.+...+. +.+.....+...++ ....+ ++..+++.++++.+.+.|++. |+.+..+ .+.+
T Consensus 229 ~-----~~~~~l~~~~~~~---~~~~~~~~~a~~~l---~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--~~~~ 295 (356)
T PRK08056 229 D-----AAVARMRRQQMPW---SINAFAALAGEVIL---QDRAYQQATWQWLAEEGARFYQALCALPLLTVWPG--RANY 295 (356)
T ss_pred H-----HHHHHHHHhCCCC---chhHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC--CCcE
Confidence 2 5655555432221 11111212211223 22333 556777888999999999875 7776543 3566
Q ss_pred EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 407 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 407 ~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+|+++.. +..++.+.|.++||.+..+... ....+++|||++. ++++++.+.+.|+++++
T Consensus 296 ~~~~~~~---~~~~~~~~l~~~gI~v~~~~~f---~~~~~~~iRis~~-------~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 296 LFLRCER---PDIDLQRALLTQRILIRSCANY---PGLDSRYYRVAIR-------SAAENERLLAALRNVLT 354 (356)
T ss_pred EEEEcCC---ChHHHHHHHHHCCeEEEECCCC---CCCCCCEEEEEEc-------CHHHHHHHHHHHHHHHc
Confidence 7877642 3456777777899999643211 1223468999963 36999999999987654
No 134
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=1.3e-21 Score=192.49 Aligned_cols=333 Identities=18% Similarity=0.113 Sum_probs=221.9
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCC--CceeeecCChH-HHHHHHHHhhc
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK--WGVNVQPLSGS-PANFEVYTAIL 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~--~~~~V~~~sGs-~A~~~~l~all 189 (529)
.+++.+.+|+...+...-..||..+ .|. . .|++.++++++-+.+. -.-.|..|+|. +|+..++.+|.
T Consensus 78 ~ts~~a~~Av~~al~Sgk~N~Yaps---~G~---~----~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA 147 (447)
T KOG0259|consen 78 RTSQEAEQAVVDALRSGKGNGYAPS---VGI---L----PARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLA 147 (447)
T ss_pred cCCHHHHHHHHHHHhcCCCCCcCCc---ccc---H----HHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhc
Confidence 4788899998877765544555321 111 1 2445555553332110 01246678887 99999999999
Q ss_pred CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--C-
Q 009673 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--D- 265 (529)
Q Consensus 190 ~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~- 265 (529)
+||..||++.|.+. .|.......+ .++.+|++-++ +|.||++.+|.++++ +|.+|++..|+||. .
T Consensus 148 ~p~aNILlPrPGfp--------~Y~~~a~~~~--lEVR~ydlLPe~~weIDL~~veal~DE-NT~AivviNP~NPcGnVy 216 (447)
T KOG0259|consen 148 NPGANILLPRPGFP--------LYDTRAIYSG--LEVRYYDLLPEKDWEIDLDGVEALADE-NTVAIVVINPNNPCGNVY 216 (447)
T ss_pred CCCCceecCCCCCc--------hHHHhhhhcC--ceeEeecccCcccceechHHHHHhhcc-CeeEEEEeCCCCCCcccc
Confidence 99999999987543 2222223344 47778887655 589999999999998 89988888898885 3
Q ss_pred --CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-c---c-cEEEecccc-cc-cCCCCeEEEeeCCCcchh--
Q 009673 266 --FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y---C-DVVTTTTHK-SL-RGPRGGMIFFKKDPVLGV-- 334 (529)
Q Consensus 266 --~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~---a-Div~~S~hK-~l-~GprgG~i~~~~~~~~~~-- 334 (529)
.-+++|+++|+++|+.+|.|+. |-.+++.+-...|+. . + -+..++.+| |+ +|||.|||+.++..+...
T Consensus 217 s~~HL~kiae~A~klgi~vIaDEV-Y~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~ 295 (447)
T KOG0259|consen 217 SEDHLKKIAETAKKLGIMVIADEV-YGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDT 295 (447)
T ss_pred cHHHHHHHHHHHHHhCCeEEehhh-cceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccch
Confidence 3478999999999999999998 444555543323332 1 2 256689999 44 999999999988642111
Q ss_pred HHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEEEccCC
Q 009673 335 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRP 413 (529)
Q Consensus 335 ~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~~~ 413 (529)
...+.+.. +-....+|.....+|+-.-|+...++-|.....-++.|++..++.|++ +++.+........+.|+.+.-
T Consensus 296 ~~~q~~~~--~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~ 373 (447)
T KOG0259|consen 296 KVVQGIKN--FLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNL 373 (447)
T ss_pred HHHHHHHH--HHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccch
Confidence 11122221 112234555556667766677654444688888899999999999998 677744322234455554321
Q ss_pred -----CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 414 -----MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 414 -----~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
.+-|.+++.++.+|..+.+ +||.... .++++||.+. +.++.+++..++|++...+-
T Consensus 374 s~~~~~~dD~dFc~kL~~Eesv~~----LPG~af~-~~nw~Ri~i~------~~~~~leea~~Rik~Fc~RH 434 (447)
T KOG0259|consen 374 SLFPDIEDDVDFCQKLAREESVIC----LPGQAFG-LKNWLRIVIT------VEEEMLEEAFSRIKEFCDRH 434 (447)
T ss_pred hhhccccccHHHHHHHhhhcceEE----ecccccc-CCCeEEEEEc------cChHHHHHHHHHHHHHHHhh
Confidence 1224456777778999998 7887532 3789999753 55688888888888876543
No 135
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.90 E-value=5.2e-22 Score=206.04 Aligned_cols=315 Identities=16% Similarity=0.111 Sum_probs=206.5
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeec-CChH-
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGS- 178 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~-~sGs- 178 (529)
+.|+|..++|+ +++.+++++...+.. + .+|+. .. ..+++ +.+++++|++++ +|.+ ++|+
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~y~~------~~-~~~lr----~~ia~~~~~~~~----~i~~~~~Ga~ 97 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSK-I-HRYPE------PD-APELR----EALSKYTGVPVE----NIIVGGDGMD 97 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHh-h-cCCCC------CC-HHHHH----HHHHHHhCCCHH----HEEEeCCCHH
Confidence 45888888774 568888888765542 1 22332 11 13444 667788898875 4555 7887
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
+++..++.++++|||+|++++|.+..+. ......|. +++.++.+ +++.+|++++++.++. ++++|+++
T Consensus 98 ~~i~~~~~~~~~~gd~vlv~~p~y~~~~--------~~~~~~g~--~~~~~~~~-~~~~~~~~~l~~~~~~-~~~~v~~~ 165 (361)
T PRK00950 98 EVIDTLMRTFIDPGDEVIIPTPTFSYYE--------ISAKAHGA--KPVYAKRE-EDFSLDVDSVLNAITE-KTKVIFLC 165 (361)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHH--------HHHHHcCC--EEEEeecC-CCCCcCHHHHHHHhcc-CCCEEEEe
Confidence 7778888888999999999998654321 12233454 55666544 4578999999998876 89999988
Q ss_pred CCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcc--cEEEecccccc--cCCCCeEEEeeCCCcc
Q 009673 259 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYC--DVVTTTTHKSL--RGPRGGMIFFKKDPVL 332 (529)
Q Consensus 259 ~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~a--Div~~S~hK~l--~GprgG~i~~~~~~~~ 332 (529)
+++||+ ..+.+++.++|+++|+++|+|++|. ++..... ....... -+++.|++|.+ +|.|.||+++++
T Consensus 166 ~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~-~~~~~~~-~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~---- 239 (361)
T PRK00950 166 TPNNPTGNLIPEEDIRKILESTDALVFVDEAYV-EFAEYDY-TPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE---- 239 (361)
T ss_pred CCCCCCCCCcCHHHHHHHHHHCCcEEEEECchh-hhCccch-HHHHHhcCCEEEEEeehHhhcCchhhcchhcCCH----
Confidence 888887 7899999999999999999999964 3321111 0001111 27779999987 578899999987
Q ss_pred hhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEcc
Q 009673 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 411 (529)
Q Consensus 333 ~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~ 411 (529)
++.+.+.....+.. .+.. ..+++..++. ..+ +++..+++.++++.+.+.|. +.+..+ .+.++|+++
T Consensus 240 --~~~~~~~~~~~~~~--~~~~-~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~l~---~~~~~~--~~~~i~~~~ 306 (361)
T PRK00950 240 --WLIDYYMRAKTPFS--LTRL-SQAAAIAALS---DKEYIEKSIEHGIKSREYLYNELP---FKVYPS--EANFVLVDV 306 (361)
T ss_pred --HHHHHHHHhcCCCC--CCHH-HHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhhcC---eeECCC--cceEEEEEC
Confidence 67666654433222 1122 2222222332 223 35555566666666655553 554432 346677777
Q ss_pred CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 412 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 412 ~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
. +.+..++.+.|.++||.+..+... +...+++|||++. +++|++++.+.|++++
T Consensus 307 ~--~~~~~~~~~~l~~~gv~v~~~~~f---~~~~~~~lRis~~-------~~~~~~~l~~~L~~il 360 (361)
T PRK00950 307 T--PMTAKEFCEELLKRGVIVRDCTSF---RGLGDYYIRVSIG-------TFEENERFLEILKEIV 360 (361)
T ss_pred C--CCCHHHHHHHHHHCCEEEeeCCcc---CCCCCCeEEEECC-------CHHHHHHHHHHHHHHh
Confidence 3 456778888888889999543211 1223578999964 3689999999998765
No 136
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.90 E-value=1.2e-21 Score=206.93 Aligned_cols=330 Identities=15% Similarity=0.125 Sum_probs=203.7
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhcc----CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNK----YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS 176 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~----y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s 176 (529)
+.++|..+++. +++.+.+++...+... ...+|. ......++++.+.+++.+..|.+.+. -+|.+|+
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~------~~~G~~~LR~aia~~~~~~~g~~~~~--~~I~it~ 106 (409)
T PRK07590 35 KIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYG------PEQGYDFLREKIAENDYQARGCDISA--DEIFISD 106 (409)
T ss_pred ceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCC------CCCCCHHHHHHHHHHHHHhcCCcCCh--hhEEECC
Confidence 56888888764 5788889888776531 111231 11223355555556666666554321 2677899
Q ss_pred hH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccce---------EEEEEcccCCC-CCCCCHHHHHH
Q 009673 177 GS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY---------FESMPYRLDES-TGLVDYDMLEK 245 (529)
Q Consensus 177 Gs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~---------~~~v~~~v~~~-~~~iD~d~le~ 245 (529)
|+ +++.. +..+++|||+|++.+|.|.++.. .+...|.. .++++++++++ ++.+|.++
T Consensus 107 Ga~~al~~-l~~~~~~gd~V~v~~P~Y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~--- 174 (409)
T PRK07590 107 GAKCDTGN-ILDIFGPDNTIAVTDPVYPVYVD--------TNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE--- 174 (409)
T ss_pred CHHHHHHH-HHHhcCCCCEEEEeCCCCcchHH--------HHHHcCCcccccccccccceeEeecccccCCcccCcc---
Confidence 98 77765 45677999999999998765432 22233331 12667777643 34455321
Q ss_pred HhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC---Cc---ccEEEecccc
Q 009673 246 TAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY---CDVVTTTTHK 314 (529)
Q Consensus 246 ~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~~---aDiv~~S~hK 314 (529)
.++|+|++++|+||+ .. .+++|.++|++||++||+|++| ..+.+.+..+.++ +. .-|+++|++|
T Consensus 175 ----~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y-~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK 249 (409)
T PRK07590 175 ----EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAY-EAFISDPSLPHSIYEIEGARECAIEFRSFSK 249 (409)
T ss_pred ----cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccc-hhhccCCCCCcchhhCCCcccceEEEecCcc
Confidence 379999998999997 33 4667888899999999999985 3444333222222 22 1267899999
Q ss_pred cc--cCCCCeEEEeeCCCcchhHHHhhh------------cccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHH
Q 009673 315 SL--RGPRGGMIFFKKDPVLGVELESAI------------NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV 380 (529)
Q Consensus 315 ~l--~GprgG~i~~~~~~~~~~~l~~~i------------~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~ 380 (529)
++ +|.|.||+++++ ++.+.+ .........+.+...+. +++.++..-.....++..+.+.
T Consensus 250 ~~~~pGlRiG~~i~~~------~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~-a~~~~l~~~~~~~~~~~~~~~~ 322 (409)
T PRK07590 250 TAGFTGTRCAYTVVPK------ELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQR-AAEAVYSPEGKAQIKELIDYYM 322 (409)
T ss_pred ccCCcCceeEEEEcCH------HHhhhccccchhhhHHHHHHHHhhcccCcCHHHHH-HHHHHhcCCcHHHHHHHHHHHH
Confidence 86 899999999987 555421 11111111122223333 3333443211123456677888
Q ss_pred HHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHH-HhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCcc
Q 009673 381 SNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVE-KILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTT 458 (529)
Q Consensus 381 ~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~-~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt 458 (529)
++++.+.+.|++.|+.+..+ ..++++|++++. +++..++. .+++++||.+. ||.. +....+++||++.
T Consensus 323 ~~r~~l~~~L~~~~~~~~~~-~g~~f~wi~~~~-~~~~~~~~~~l~~~~gv~v~----pg~~f~~~~~~~iRi~~~---- 392 (409)
T PRK07590 323 ENAKIIREGLESAGFEVYGG-VNAPYIWVKTPD-GMSSWDFFDKLLQEANVVGT----PGSGFGPSGEGYFRLSAF---- 392 (409)
T ss_pred HHHHHHHHHHHhcCCceecC-CcceEEEEECCC-CCCHHHHHHHHHHHCCEEEe----ChhHhCCCCCCEEEEEcc----
Confidence 89999999999888776543 235678888854 45555554 45567899994 4433 1223568999841
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 009673 459 RGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 459 ~g~~~~d~~~la~~i~~~ 476 (529)
.+++++++..+.|.++
T Consensus 393 --~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 393 --GSRENVLEAMERIKKA 408 (409)
T ss_pred --CCHHHHHHHHHHHHhh
Confidence 2478888888888664
No 137
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1.3e-21 Score=204.29 Aligned_cols=321 Identities=14% Similarity=0.117 Sum_probs=208.9
Q ss_pred ceeEecCCCC--CcHHHHHHHhhhhhccC-CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC----CCCCCCceeeecCC
Q 009673 104 SLELIASENF--TSRAVMEAVGSCLTNKY-SEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNVQPLS 176 (529)
Q Consensus 104 ~i~L~asen~--~~~~V~eal~~~l~~~y-~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g----~~~~~~~~~V~~~s 176 (529)
.+.|..++|+ +|+.+++++.+.+.+.+ ..+||. .| ..++++...+++.+.+| ++++ +|.+|+
T Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----~G---~~~Lr~aia~~~~~~~~~~~~v~~~----~I~it~ 98 (374)
T PRK02610 30 LDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPD----GG---HEALKQAIAEYVNESAAGSSQITPA----NISVGN 98 (374)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCC----Cc---hHHHHHHHHHHhCccccccCCCCHH----HEEEcC
Confidence 4678788874 68999999987665432 123432 12 23455444455544432 4443 577899
Q ss_pred hH-HHHHHHHHhhcCCCC-EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cC
Q 009673 177 GS-PANFEVYTAILKPHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FR 251 (529)
Q Consensus 177 Gs-~A~~~~l~all~pGD-~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---~~ 251 (529)
|+ +++..++.+++.+|| +|++++|.|.++. ..+...|. +++.++++++++.+|++++++.++. .+
T Consensus 99 Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~--------~~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 168 (374)
T PRK02610 99 GSDELIRSLLIATCLGGEGSILVAEPTFSMYG--------ILAQTLGI--PVVRVGRDPETFEIDLAAAQSAIEQTQNPP 168 (374)
T ss_pred ChHHHHHHHHHHHcCCCCCeEEEcCCChHHHH--------HHHHHcCC--EEEEecCCcccCCCCHHHHHHHHHhhcCCC
Confidence 98 888878888888886 8999999775432 13345565 6677777655689999999998874 48
Q ss_pred CcEEEEcCCCCCC--CCCHHHHHHHHH-HhCCEEEEecccccccccccccCCCCC-cc-cEEEecccccc--cCCCCeEE
Q 009673 252 PKLIIAGASAYPR--DFDYPRMRQIAD-AVGALLMMDMAHISGLVAASVVADPFK-YC-DVVTTTTHKSL--RGPRGGMI 324 (529)
Q Consensus 252 pklIi~~~s~~p~--~~d~~~i~~ia~-~~g~~livD~ah~~Gli~~~~~~~~~~-~a-Div~~S~hK~l--~GprgG~i 324 (529)
+|+|++++|+||+ ..+.+++.++++ .+|++||+|+++. .+.... ....+. +. -|++.|++|++ +|+|.||+
T Consensus 169 ~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~-~~~~~~-~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~ 246 (374)
T PRK02610 169 VRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYF-EFSQTT-LVGELAQHPNWVILRTFSKAFRLAAHRVGYA 246 (374)
T ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEecccc-ccCccc-hHHHHhcCCCEEEEEecchhccCcccceeee
Confidence 9999998899997 556666555543 1489999999853 332111 001111 11 27789999986 89999999
Q ss_pred EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCC
Q 009673 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSD 403 (529)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~ 403 (529)
++++ ++.+.+.....+. +.+...+.++ ..+++.. +.+.+..+++.++++.+.+.|++. |+.+.+. .
T Consensus 247 v~~~------~l~~~l~~~~~~~--~~~~~~q~a~-~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~--~ 313 (374)
T PRK02610 247 IGHP------ELIAVLEKVRLPY--NLPSFSQLAA-QLALEHR--QELLAAIPEILQERDRLYQALQELPQLRVWPS--A 313 (374)
T ss_pred ecCH------HHHHHHHHhcCCC--CCCHHHHHHH-HHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEeCCC--c
Confidence 9977 6777766543222 2233333332 3344321 234444455566677788888774 6665432 3
Q ss_pred CceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 404 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 404 ~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+.++|+++.. +.+..++.+.|.++||.+.. .++++||++. +++++++..+.|++++.
T Consensus 314 g~f~~~~l~~-~~~~~~~~~~l~~~gi~v~~----------~~~~lRls~~-------~~~~~~~~l~~l~~~l~ 370 (374)
T PRK02610 314 ANFLYLRLSQ-DAALAALHQALKAQGTLVRH----------TGGGLRITIG-------TPEENQRTLERLQAALT 370 (374)
T ss_pred ceEEEEeCCC-CCCHHHHHHHHHHCCEEEEe----------CCCeEEEeCC-------CHHHHHHHHHHHHHHHh
Confidence 5677887753 45667788889999999842 1468999863 14678888888877664
No 138
>PRK03321 putative aminotransferase; Provisional
Probab=99.90 E-value=6.4e-22 Score=204.74 Aligned_cols=313 Identities=17% Similarity=0.140 Sum_probs=212.5
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.|+|..+++. +++.+++++...+.. + ..||. ...++++ +.+++++|++++ +|.+++|+ +
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~-------~g~~~lr----~~ia~~~~~~~~----~I~~~~G~~~ 85 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAG-V-NRYPD-------MGAVELR----AALAEHLGVPPE----HVAVGCGSVA 85 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHh-c-CcCCC-------CcHHHHH----HHHHHHhCcCHH----HEEECCCHHH
Confidence 35788777663 577999999876542 1 22331 1233444 667788888764 56678998 7
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
++..++.++++|||+|++++|.+..+. ......|. +++.+++++ ++.+|++++++.+++ ++++|++++
T Consensus 86 ~l~~~~~~~~~~gd~Vli~~p~y~~~~--------~~~~~~g~--~~~~v~~~~-~~~~~~~~l~~~~~~-~~~~v~l~~ 153 (352)
T PRK03321 86 LCQQLVQATAGPGDEVIFAWRSFEAYP--------ILVQVAGA--TPVQVPLTP-DHTHDLDAMAAAITD-RTRLIFVCN 153 (352)
T ss_pred HHHHHHHHhcCCCCEEEeCCCCHHHHH--------HHHHHcCC--EEEEccCCC-CCCCCHHHHHHhhcc-CCCEEEEeC
Confidence 777788888999999999987653221 11233454 666777763 478999999999977 899999988
Q ss_pred CCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCCC----ccc-EEEecccccc--cCCCCeEEEeeC
Q 009673 260 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKK 328 (529)
Q Consensus 260 s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~~----~aD-iv~~S~hK~l--~GprgG~i~~~~ 328 (529)
++||+ ..+.+++.++|+. +|+++++|++|. ++...+..+.++. ..+ ++++|++|.+ +|.|.||+++++
T Consensus 154 p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 232 (352)
T PRK03321 154 PNNPTGTVVTPAELARFLDAVPADVLVVLDEAYV-EYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP 232 (352)
T ss_pred CCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHH-HhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH
Confidence 88887 7799999999987 599999999853 4443322212121 122 6778999987 588999999987
Q ss_pred CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~ 408 (529)
++.+.+.+...+. +.+...+.++ ..++.. ...+.+..+++.++++.+.+.|.+.|+.+..+ ...++|
T Consensus 233 ------~~~~~~~~~~~~~--~~s~~~q~~a-~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~--~g~~i~ 299 (352)
T PRK03321 233 ------EVIAALRKVAVPF--SVNSLAQAAA-IASLAA--EDELLERVDAVVAERDRVRAALRAAGWTVPPS--QANFVW 299 (352)
T ss_pred ------HHHHHHHHhcCCC--CCCHHHHHHH-HHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC--CCCEEE
Confidence 6777776543222 2223333333 224432 23455566667777788889998888765433 345677
Q ss_pred EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
+++. .+..++.+.|+++||.+.. +...+|||++. +.++++++.++|++++
T Consensus 300 i~l~---~~~~~~~~~l~~~gI~v~~---------~~~~~iRi~~~-------~~~~~~~~~~al~~~~ 349 (352)
T PRK03321 300 LPLG---ERTADFAAAAAEAGVVVRP---------FAGEGVRVTIG-------APEENDAFLRAARAWR 349 (352)
T ss_pred EeCC---CCHHHHHHHHHHCCEEEEc---------cCCCcEEEeeC-------CHHHHHHHHHHHHHHh
Confidence 7763 2456788888899999853 12356999963 3799999999998764
No 139
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1.1e-21 Score=204.61 Aligned_cols=318 Identities=17% Similarity=0.151 Sum_probs=211.4
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.|+|..++|+ +++.+.+++...... . ..|+. ... +.+ ++.+++++|++++ +|.+++|+ +
T Consensus 37 ~~i~l~~~~~~~~~~~~~~~al~~~~~~-~-~~Y~~------~~g-~~l----r~~ia~~~~~~~~----~i~~t~G~~~ 99 (371)
T PRK05166 37 RIAKLGSNENPLGPSPAVRRAFADIAEL-L-RLYPD------PQG-RAL----REAIAARTGVPAD----RIILGNGSED 99 (371)
T ss_pred ceEEcCCCCCCCCCCHHHHHHHHHHHHH-h-hcCCC------CcH-HHH----HHHHHHHhCcCHH----HEEEcCCHHH
Confidence 45888877764 688899988754322 1 12332 111 233 3667778898764 56678988 8
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
++..++.++++|||+|++.+|.|..+.. .+...|. ++++++++ +++.+|++++++.+++ ++|+|++++
T Consensus 100 ~l~~~~~~~~~~gd~vli~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~~~~~l~~~~~~-~~~~v~l~~ 167 (371)
T PRK05166 100 LIAVICRAVLRPGDRVVTLYPSFPLHED--------YPTMMGA--RVERVTVT-PDLGFDLDALCAAVAR-APRMLMFSN 167 (371)
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCC--eEEEeecC-CCCCCCHHHHHHhhhc-CCCEEEEeC
Confidence 8888889999999999999987754321 2234454 66666665 3578999999999877 899999999
Q ss_pred CCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCC---C--c-ccEEEecccccc--cCCCCeEEEee
Q 009673 260 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPF---K--Y-CDVVTTTTHKSL--RGPRGGMIFFK 327 (529)
Q Consensus 260 s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~---~--~-aDiv~~S~hK~l--~GprgG~i~~~ 327 (529)
++||+ ..+.+++.+|++. .++++++|+++ ..+...+..++.+ . + .-|++.|++|.+ +|+|.||++..
T Consensus 168 p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~ 246 (371)
T PRK05166 168 PSNPVGSWLTADQLARVLDATPPETLIVVDEAY-AEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVS 246 (371)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcH-HHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecC
Confidence 99997 6777777777664 47899999984 3444322222211 1 1 137889999986 89999998875
Q ss_pred CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 407 (529)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~ 407 (529)
++ ++.+.+.....+ .+.+...+.++ ..++.. ...+++..+.+.++++.+.+.|++.|+.+..+ ...++
T Consensus 247 ~~-----~l~~~~~~~~~~--~~~~~~~q~~~-~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~p~--~g~fl 314 (371)
T PRK05166 247 DP-----ELVGLLDRVRTP--FNVNGAAQAAA-LAALDD--EEHLAKGVALALAERERLKKELAEMGYRIAPS--RANFL 314 (371)
T ss_pred CH-----HHHHHHHHhccC--CCCCHHHHHHH-HHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCcCeeCCC--cCCEE
Confidence 43 666666543322 22222222222 223431 12346667788888999999999888876543 24567
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
|+++.. +..++.+.|.++||.+.. |..+ ..+++|||++. +.++++++.+.|++++
T Consensus 315 ~~~~~~---~~~~l~~~l~~~gi~v~p----~~~~-~~~~~iRi~~~-------~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 315 FFDARR---PASAVAEALLRQGVIVKP----WKQP-GFETFIRVSIG-------SPEENDHFVAALDKVL 369 (371)
T ss_pred EEeCCC---CHHHHHHHHHHCCeEEec----CCCC-CCCCeEEEEcC-------CHHHHHHHHHHHHHHh
Confidence 777542 456777788788999954 4321 23678999964 2578899988887654
No 140
>PRK10534 L-threonine aldolase; Provisional
Probab=99.90 E-value=7.4e-22 Score=202.67 Aligned_cols=317 Identities=16% Similarity=0.186 Sum_probs=202.7
Q ss_pred eeEecCCCC-CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673 105 LELIASENF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (529)
Q Consensus 105 i~L~asen~-~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~ 183 (529)
|+|..++|+ +||.+++++....... .+ |+......++| +.+++++|+++. +.+.+|++++..
T Consensus 2 ~~~~~~~~~~p~~~~~~a~~~~~~~~-------~~-Y~~~~~~~~L~----~~la~~~g~~~~-----~v~~~g~~a~~~ 64 (333)
T PRK10534 2 IDLRSDTVTRPSRAMLEAMMAAPVGD-------DV-YGDDPTVNALQ----DYAAELSGKEAA-----LFLPTGTQANLV 64 (333)
T ss_pred cccccccCCCCCHHHHHHHHhccCCC-------cc-cCCCHHHHHHH----HHHHHHhCCCeE-----EEeCchHHHHHH
Confidence 456666665 7899999987543211 12 32334455666 667888998762 345677788998
Q ss_pred HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc
Q 009673 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAG 258 (529)
Q Consensus 184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pklIi~~ 258 (529)
++.++++|||+|+++.+.|...+..+ .....+ ..+++.++++ +++.+|+++|++++++. ++++|+++
T Consensus 65 ~l~~~~~~gd~vi~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~ 136 (333)
T PRK10534 65 ALLSHCERGEEYIVGQAAHNYLYEAG------GAAVLG-SIQPQPIDAA-ADGTLPLDKVAAKIKPDDIHFARTRLLSLE 136 (333)
T ss_pred HHHHhcCCCCeeEEechhhhhHhcCC------chHHhc-CceEEeecCC-CCCCCCHHHHHHhhcccCcCcccceEEEEe
Confidence 88899999999998776553211100 011222 1355666665 46899999999988653 58899998
Q ss_pred CCCCCCCCCHH---HHHHHHHHhCCEEEEecccccccccc-cccCCCC-CcccEEEecccccccCCCCeEEEeeCCCcch
Q 009673 259 ASAYPRDFDYP---RMRQIADAVGALLMMDMAHISGLVAA-SVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLG 333 (529)
Q Consensus 259 ~s~~p~~~d~~---~i~~ia~~~g~~livD~ah~~Gli~~-~~~~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~ 333 (529)
+|+++...+.+ +|.++|+++|++|++|+||..+.... +.....+ .+.|.++.|+||.++.+.||++++++
T Consensus 137 np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~G~~~~~~~----- 211 (333)
T PRK10534 137 NTHNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNR----- 211 (333)
T ss_pred cCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcccceEEcCH-----
Confidence 88777766654 55678899999999999976432111 1111011 24576667899988666566788877
Q ss_pred hHHHhhhcccccCCCCCCChHHHH-HHH-HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEcc
Q 009673 334 VELESAINNAVFPGLQGGPHNHTI-GGL-AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 411 (529)
Q Consensus 334 ~~l~~~i~~~~~p~~~g~p~~~~i-aal-a~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~ 411 (529)
++.+.+.....+. .++...... ++. ..+|+. ..++.++..++++++.+.|.+.|+++..+ .++++++++
T Consensus 212 -~~i~~~~~~~~~~-~~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~r~~l~~~L~~~g~~~~~~--~~nfv~~~~ 282 (333)
T PRK10534 212 -DYIKRARRWRKMT-GGGMRQAGILAAAGLYALKH-----NVARLQEDHDNAAWLAEQLREAGADVMRQ--DTNMLFVRV 282 (333)
T ss_pred -HHHHHHHHHHHHh-CCchhhHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHhCCCccCCC--CceEEEEEC
Confidence 6777666543322 111111111 111 112321 23445556677889999999999987654 356778777
Q ss_pred CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 412 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 412 ~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
.. .+..++.+.|.++||.+. |+ ..+|++... | +++++++++.+.|++.+
T Consensus 283 ~~--~~~~~~~~~l~~~gi~v~----~~-------~~~rl~~~~---r-~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 283 GE--EQAAALGEYMRERNVLIN----AS-------PIVRLVTHL---D-VSREQLAEVVAHWRAFL 331 (333)
T ss_pred Cc--hhHHHHHHHHHHcCeeec----CC-------ceEEEEEEe---C-CCHHHHHHHHHHHHHHh
Confidence 52 235678899999999994 32 257886532 2 46899999999998655
No 141
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.90 E-value=3.8e-21 Score=202.87 Aligned_cols=328 Identities=18% Similarity=0.196 Sum_probs=214.0
Q ss_pred ecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673 108 IASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (529)
Q Consensus 108 ~asen~~----~~~V~eal~~~l~~~y~~G~p~~r~~~g-~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~ 182 (529)
..|++|+ .|+|++++...+. +|..+..+.|...| .+...++| +.+++++|.+. .+..+||++||.
T Consensus 50 ~~sn~ylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----~~~~~SG~~An~ 119 (406)
T PRK13393 50 WCSNDYLGMGQHPAVLAAMHEALD-TCGAGAGGTRNISGTNHYHVLLE----AELADLHGKEA-----ALLFTSGYVSNW 119 (406)
T ss_pred eecccccCCCCCHHHHHHHHHHHH-HcCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEeCCcHHHHH
Confidence 4566664 7899999988774 56555555554433 33445555 77889999753 356799999999
Q ss_pred HHHHhhcC--CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEEE
Q 009673 183 EVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIA 257 (529)
Q Consensus 183 ~~l~all~--pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---~~pklIi~ 257 (529)
.++.++.. +||.|+.....|+..+. .+...|. +...++ ..|++++++.++. .++++|++
T Consensus 120 ~ai~~l~~~~~g~~I~~~~~~H~s~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~~~~v~~ 183 (406)
T PRK13393 120 AALSTLGSRLPGCVILSDELNHASMIE--------GIRHSRA--EKRIFR------HNDPADLERKLSDLDPHRPKLVAF 183 (406)
T ss_pred HHHHHhhcCCCCCEEEEccchhHHHHH--------HHHHcCC--eEEEeC------CCCHHHHHHHHHhccCCCCEEEEE
Confidence 99988765 88888877777654432 1223343 333333 2477788777753 25678888
Q ss_pred cCCCCC--CCCCHHHHHHHHHHhCCEEEEecccccccccc-c--ccC-CCC-CcccEEEecccccccCCCCeEEEeeCCC
Q 009673 258 GASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VVA-DPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDP 330 (529)
Q Consensus 258 ~~s~~p--~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~--~~~-~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~~ 330 (529)
++++++ ...|+++|.++|+++|+++++|++|..|+... + ... ..+ +..|++++|++|.++ ..|||+++++
T Consensus 184 ~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g-~~GG~~~~~~-- 260 (406)
T PRK13393 184 ESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFG-VMGGYITGSA-- 260 (406)
T ss_pred cCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhc-ccCceeeCCH--
Confidence 765544 37899999999999999999999998786432 1 110 111 235889999999984 4579998876
Q ss_pred cchhHHHhhhcccccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEE
Q 009673 331 VLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 409 (529)
Q Consensus 331 ~~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v 409 (529)
++.+.+.....++. .++.+....++...+++...... ...+++.++++++.+.|++.|++++.+ ...++.+
T Consensus 261 ----~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~i~~v 332 (406)
T PRK13393 261 ----ALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKAGIPHLPN--PSHIVPV 332 (406)
T ss_pred ----HHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHcCCCcCCC--CCCeEEE
Confidence 66666554322221 23334444455556777654322 234566788899999998888876643 2344444
Q ss_pred ccCCCCCcHHHHHHhHhc-CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 410 DLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 410 ~~~~~~i~~~~~~~~L~~-~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
.+.. ..+...+.+.|.+ +||.+.....|. .+.+.+.|||+.+..+ +++|++++++.|++++..
T Consensus 333 ~~~~-~~~~~~l~~~L~~~~Gi~v~~~~~p~--~p~g~~~iRis~~~~~----t~edid~l~~~l~~~~~~ 396 (406)
T PRK13393 333 MVGD-PVLCKQISDELLDRYGIYVQPINYPT--VPRGTERLRITPSPLH----TDADIEHLVQALSEIWAR 396 (406)
T ss_pred EeCC-HHHHHHHHHHHHHhCCEEEEeECCCC--CCCCCceEEEEECCCC----CHHHHHHHHHHHHHHHHh
Confidence 3321 1133556666655 799997643332 1223468999987654 589999999999988753
No 142
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.90 E-value=6.4e-22 Score=211.36 Aligned_cols=344 Identities=15% Similarity=0.161 Sum_probs=207.9
Q ss_pred cceeEecCCC-CCcHHHHHHHhhhh-hccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCC-ceeeecCChH-
Q 009673 103 KSLELIASEN-FTSRAVMEAVGSCL-TNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKW-GVNVQPLSGS- 178 (529)
Q Consensus 103 ~~i~L~asen-~~~~~V~eal~~~l-~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~-~~~V~~~sGs- 178 (529)
+.|++..++. +.++..++++...+ ... ||. ........|+.+.+++.+.++...... ..+|.+++|+
T Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~----Y~~-----p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat 165 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFLYEMCDGIIGDN----YPV-----PDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGT 165 (521)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHhhcCC----CCC-----CCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHH
Confidence 4467766663 33445555555443 222 321 112234566666667776654321111 0267778887
Q ss_pred HHHHHHHHh-----hcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-C-----CCCCHHHHHHHh
Q 009673 179 PANFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-T-----GLVDYDMLEKTA 247 (529)
Q Consensus 179 ~A~~~~l~a-----ll~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~-----~~iD~d~le~~i 247 (529)
+|+..++.+ +++|||+|++++|.|..+.. .+...+...++++++.+++ . |.+|.+++++++
T Consensus 166 ~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~--------~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~ 237 (521)
T TIGR03801 166 AAMCYIFDSLKANELLKKGDKIALMTPIFTPYLE--------IPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLR 237 (521)
T ss_pred HHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHH--------HHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhc
Confidence 888888876 78999999999997754421 2233443457777766532 2 789999999988
Q ss_pred hhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHh--CCEEEEecccccccccccccCCCCC---cccEEEecccccc-
Q 009673 248 ILFRPKLIIAGASAYPR--DF---DYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL- 316 (529)
Q Consensus 248 ~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~---~aDiv~~S~hK~l- 316 (529)
++ ++|+|++++|+||+ .. .+++|.++|++| +++||+|+++. .+.. + ..+.+. .--+++.|++|++
T Consensus 238 ~~-~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~-~f~~-~-~~sl~~~~~~~vI~v~SfSK~fg 313 (521)
T TIGR03801 238 DP-SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYG-TFVD-D-FRSLFAELPYNTIGVYSFSKYFG 313 (521)
T ss_pred CC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCch-hhcc-c-ccchhhhCCCCEEEEEcchhhcc
Confidence 76 89999999999997 44 477888889987 99999999854 3332 1 112111 1238889999986
Q ss_pred -cCCCCeEEEeeCCCc---c---h-hHHHhhhc------------------------ccccCCCC--CCChHHHHH--HH
Q 009673 317 -RGPRGGMIFFKKDPV---L---G-VELESAIN------------------------NAVFPGLQ--GGPHNHTIG--GL 360 (529)
Q Consensus 317 -~GprgG~i~~~~~~~---~---~-~~l~~~i~------------------------~~~~p~~~--g~p~~~~ia--al 360 (529)
+|||.||++++++.. . + .+..+.++ ........ ++|...+++ ++
T Consensus 314 ~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~ 393 (521)
T TIGR03801 314 ATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSL 393 (521)
T ss_pred CchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHH
Confidence 899999999986310 0 0 00111111 00000111 233333333 33
Q ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec-CCCCCceEEEccCCCC---------------CcH-HHHHH
Q 009673 361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-GGSDNHLVLVDLRPMG---------------IDG-ARVEK 423 (529)
Q Consensus 361 a~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~-~gt~~~~~~v~~~~~~---------------i~~-~~~~~ 423 (529)
..+++. .....++.++.+.++++.+.+.| |+.+.. +....+++++|+...+ .+. +.+.+
T Consensus 394 ~all~~-~~~y~~~~~~~~~~R~~~l~~~L---g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~ 469 (521)
T TIGR03801 394 FALMDK-ENAYKAETKDICRRREKLLFRGL---GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFR 469 (521)
T ss_pred HHHhcc-chhHHHHHHHHHHHHHHHHHHhc---CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHH
Confidence 323332 11223566677778888777777 554321 2223567788886321 123 44667
Q ss_pred hHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 424 ILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 424 ~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
++++.||.+ +||......++++||++.. .+++++.++.+.|.+++...
T Consensus 470 L~~e~gV~v----~PG~~Fg~~~~~vRisla~-----l~~~~~~~~~~rl~~~~~~~ 517 (521)
T TIGR03801 470 LAEETGIVL----LPGGGFGGPEWSVRVSLAN-----LNEYDYAEIGRAIRKILDEY 517 (521)
T ss_pred HHHhCCEEE----eCchhcCCCCCeEEEEecC-----CCHHHHHHHHHHHHHHHHHH
Confidence 778999999 6776522235679999742 45789999999999888654
No 143
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.90 E-value=2.3e-21 Score=201.62 Aligned_cols=338 Identities=14% Similarity=0.088 Sum_probs=209.7
Q ss_pred hhhcccCChHHHHHHHHHHHH-hhcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 009673 80 DYSLGEADPEVCEIITKEKER-QFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (529)
Q Consensus 80 ~~~l~~~d~~~~~~~~~e~~~-~~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~ 156 (529)
.+++...+...+.-+...... ....++|..+++ +.++.+++++...... .+|+. ..| ..++++.+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~---~~Y~~---~~G---~~~lr~~ia~~ 74 (364)
T PRK07865 4 SARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADA---PGYPT---TAG---TPELREAIVGW 74 (364)
T ss_pred cccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh---CCCCC---ccC---CHHHHHHHHHH
Confidence 445666666655554333322 235678876654 3467888888754321 12332 112 23555566688
Q ss_pred HHHHcCCC-CCCCceeeecCChH-HHHHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC
Q 009673 157 ALAAFNLD-ENKWGVNVQPLSGS-PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (529)
Q Consensus 157 la~~~g~~-~~~~~~~V~~~sGs-~A~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~ 233 (529)
+.+.+|.+ .+. -+|.+++|+ +++..++.++ ++|||+|++++|.|.++.. .+...|. +++.++
T Consensus 75 l~~~~~~~~~~~--~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~--- 139 (364)
T PRK07865 75 LARRRGVTGLDP--AAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEV--------GARLAGA--TVVRAD--- 139 (364)
T ss_pred HHHHcCCCCCCc--ccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHH--------HHHhcCC--EEEecC---
Confidence 88877754 221 267789998 8887777777 7999999999998765421 2334454 555543
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-----
Q 009673 234 STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----- 303 (529)
Q Consensus 234 ~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----- 303 (529)
++++++. .++++|++++++||+ .. ++++|.++|+++|++||+|++|. .+.+.+.....+.
T Consensus 140 -----~~~~l~~----~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~ 209 (364)
T PRK07865 140 -----SLTELGP----QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYL-ELGWDAEPVSILDPRVCG 209 (364)
T ss_pred -----ChhhCCc----ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-hhccCCCCCccccccccC
Confidence 2233322 378999998899997 33 46788889999999999999954 4443221111111
Q ss_pred ---cccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHH
Q 009673 304 ---YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (529)
Q Consensus 304 ---~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~ 378 (529)
.-.++++|++|.+ +|.|+||+++++ ++.+.+...........+...+. ++..++.. ....++.++.
T Consensus 210 ~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~------~~~~~~~~~~~~~~~~~~~~~q~-~~~~~l~~--~~~~~~~~~~ 280 (364)
T PRK07865 210 GDHTGLLAVHSLSKQSNLAGYRAGFVAGDP------ALVAELLEVRKHAGMMVPAPVQA-AMVAALGD--DAHVREQRER 280 (364)
T ss_pred CccceEEEEeechhccCCCceeeEEEecCH------HHHHHHHHHHHhcCCCcCHHHHH-HHHHHhCC--HHHHHHHHHH
Confidence 1238889999986 799999999887 67666654322211222233222 22223322 1223566777
Q ss_pred HHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCc
Q 009673 379 VVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMT 457 (529)
Q Consensus 379 i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~t 457 (529)
+.++++.+.+.|++.|+.+..+. .+.++|+.+. .+..++.+.|.+.||.+.. |.. ++..++++||++..
T Consensus 281 ~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~---~~~~~~~~~l~~~gv~v~p----g~~f~~~~~~~iRi~~~~-- 350 (364)
T PRK07865 281 YARRRAVLRPALEAAGFRVDHSE-AGLYLWATRG---EDCWDTVAWLAERGILVAP----GDFYGPAGAQHVRVALTA-- 350 (364)
T ss_pred HHHHHHHHHHHHHHcCCcccCCC-ccEEEEEeCC---CCHHHHHHHHHHCCEEEeC----ccccCcCCCCEEEEEecC--
Confidence 88888999999988887765432 2455666652 2456677888899999954 332 12235789999642
Q ss_pred cCCCCHHHHHHHHHHHH
Q 009673 458 TRGFSEKEFVAIADFIH 474 (529)
Q Consensus 458 t~g~~~~d~~~la~~i~ 474 (529)
+++++++.++.|+
T Consensus 351 ----~~~~~~~~~~~l~ 363 (364)
T PRK07865 351 ----TDERIAAAVERLA 363 (364)
T ss_pred ----CHHHHHHHHHHhh
Confidence 3688888888764
No 144
>PLN02672 methionine S-methyltransferase
Probab=99.89 E-value=2.6e-21 Score=218.92 Aligned_cols=332 Identities=13% Similarity=0.106 Sum_probs=216.5
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhcc-CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~-y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs- 178 (529)
+.|.|..++|+ +|+.+++++...+... ++.|+| ++.+..++++++.+|++.+.. -+|.+++|+
T Consensus 698 ~vI~LsinE~d~ppPp~V~eAi~eal~~~~~s~g~p------------dlr~aLa~~la~~~Gv~~d~~-e~IIvt~Gs~ 764 (1082)
T PLN02672 698 SLIHMDVDESFLPVPSAVKASIFESFVRQNISESET------------DPRPSILQFIKSNYGFPTDSC-TEFVYGDTSL 764 (1082)
T ss_pred CEEEEeCCCCCCCCCHHHHHHHHHHHhhcCCCCCCh------------HHHHHHHHHHHHHhCcCCCCC-CEEEEeCCHH
Confidence 56889888874 6899999998765321 111111 223455688999999986421 256678898
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEEEE
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIA 257 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pklIi~ 257 (529)
+++..++.++++|||.|++++|.|+.+. ..+...|. +++.+++++ +++.+|+++++++++..+.++|++
T Consensus 765 elL~lll~aLl~pGD~VLVp~PtY~~Y~--------~~a~~~Ga--~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L 834 (1082)
T PLN02672 765 ALFNKLVLCCVQEGGTLCFPAGSNGTYV--------SAAKFLKA--NFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYI 834 (1082)
T ss_pred HHHHHHHHHHcCCCCEEEEeCCChHHHH--------HHHHHcCC--EEEEEecccccCCCCCHHHHHHHhccCCCCEEEE
Confidence 7777888999999999999999776543 23455665 666777764 358999999999986533456777
Q ss_pred cCCC-CCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccC--CCC-------Cc-----ccEEEecccccc-
Q 009673 258 GASA-YPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPF-------KY-----CDVVTTTTHKSL- 316 (529)
Q Consensus 258 ~~s~-~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~-------~~-----aDiv~~S~hK~l- 316 (529)
++|+ ||+ .. .+++|.++|++||++||+|++ |.++.+.+... .++ .. .-++++|++|.+
T Consensus 835 ~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEa-YsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~ 913 (1082)
T PLN02672 835 SGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTS-FSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELL 913 (1082)
T ss_pred ECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCC-CCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhc
Confidence 7776 887 33 577888899999999999999 44555433110 011 01 126778999864
Q ss_pred -cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh--cCc----hHHHHHHHHHHHHHHHHHH
Q 009673 317 -RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSP----EFKVYQNKVVSNCRALASR 389 (529)
Q Consensus 317 -~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~--~~~----~~~~~~~~i~~~a~~l~~~ 389 (529)
+|+|.||++++++ ++.+.+.... ...+.....+.++.+ ++... ... ..+++++.+.++++.+.+.
T Consensus 914 lpGLRIGylIap~~-----eLi~~l~~~~--~~s~~~~~~q~Aaaa-alall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~ 985 (1082)
T PLN02672 914 SGGHEFGFLALNDS-----VLIDAFHSAP--GLSRPHSTLKYTIKK-LLGLKNQKSSDLLDGVAEQKKILKSRAERLKET 985 (1082)
T ss_pred cHHHHheeEEeCCH-----HHHHHHHHhh--hhcCCCcHHHHHHHH-HHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999763 4777665421 111111222333221 22111 111 2356667789999999999
Q ss_pred HHhcCcEEecCCCCCceEEEccCC----------------CCCcHHHHHH-hHhcCCeEEcCCCCCCCCCCCCCCeEEEc
Q 009673 390 LVELGYKLVSGGSDNHLVLVDLRP----------------MGIDGARVEK-ILDMASITLNKNSVPGDKSALVPGGIRIG 452 (529)
Q Consensus 390 L~~~G~~v~~~gt~~~~~~v~~~~----------------~~i~~~~~~~-~L~~~GI~v~~~~~Pg~~~~~~~~~iRig 452 (529)
|.+.|+.+..+ ..++++|+++.. .+.+..++.+ +++++||.+.+ |... ..++++||+
T Consensus 986 L~~~Gi~v~~P-eGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~P----Gs~F-G~~g~~RIs 1059 (1082)
T PLN02672 986 LEACGWDVLEP-QGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINS----SSWT-GIPGYCRFS 1059 (1082)
T ss_pred HHHCCCeEecC-CcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEec----Cccc-CCCCeEEEE
Confidence 99989887654 235666766531 0235555555 45678999954 4221 125789998
Q ss_pred cCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 453 SPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 453 ~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+. .+++++++..+.|++.+.
T Consensus 1060 fa------~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1060 FA------LEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred ec------CCHHHHHHHHHHHHHHHH
Confidence 63 357899998888877554
No 145
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.89 E-value=3.2e-21 Score=202.23 Aligned_cols=327 Identities=16% Similarity=0.156 Sum_probs=222.5
Q ss_pred eeEecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 009673 105 LELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (529)
Q Consensus 105 i~L~asen~~----~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~ 179 (529)
+....|.+|+ .|+++++....+ .+|..|..++|...|+ .+..++| +.+++++|.+.. +..+||..
T Consensus 104 ~l~FsSndYLGL~~~p~v~~a~~~ai-~~yG~g~~gSrl~~G~~~~h~~LE----~~LA~f~g~e~a-----ll~sSGy~ 173 (476)
T PLN02955 104 LLLFSGNDYLGLSSHPTISNAAANAA-KEYGMGPKGSALICGYTTYHRLLE----SSLADLKKKEDC-----LVCPTGFA 173 (476)
T ss_pred EEEeeccCccCCCCCHHHHHHHHHHH-HHcCCCCCCcCccccChHHHHHHH----HHHHHHHCCCcE-----EEECChHH
Confidence 3445688875 789999988776 6788888888877765 5566777 778999999872 55799999
Q ss_pred HHHHHHHhhc--------------CCCCEEEEcCCCCCccccccccccccccccccc--eEEEEEcccCCCCCCCCHHHH
Q 009673 180 ANFEVYTAIL--------------KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI--YFESMPYRLDESTGLVDYDML 243 (529)
Q Consensus 180 A~~~~l~all--------------~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~--~~~~v~~~v~~~~~~iD~d~l 243 (529)
||..++.+|+ +.+|.|+.....|.+.+. | +..+.. ..+++.|+ ..|+|+|
T Consensus 174 AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~d-G-------~~ls~~~~~a~~~~f~------HND~~~L 239 (476)
T PLN02955 174 ANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIID-G-------VRLAERQGNVEVFVYR------HCDMYHL 239 (476)
T ss_pred HHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHH-H-------HHhccccCCceEEEeC------CCCHHHH
Confidence 9999998873 456777776666644321 1 222210 12444544 4589999
Q ss_pred HHHhhhcC--CcEEEEc--CCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccc---cccC-CCC-CcccEEEecccc
Q 009673 244 EKTAILFR--PKLIIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVVA-DPF-KYCDVVTTTTHK 314 (529)
Q Consensus 244 e~~i~~~~--pklIi~~--~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~---~~~~-~~~-~~aDiv~~S~hK 314 (529)
+++++..+ .++|++. ++..+...|+++|.++|++||++||+|+||..|.+.. |... ..+ +..|++++|++|
T Consensus 240 e~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsK 319 (476)
T PLN02955 240 NSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSK 319 (476)
T ss_pred HHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCcc
Confidence 98886532 3455554 4555568899999999999999999999999887644 1111 111 246899999999
Q ss_pred cccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCCh-HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc
Q 009673 315 SLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPH-NHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (529)
Q Consensus 315 ~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~-~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~ 393 (529)
.+ |.+||++++++ ++.+.++...-+++.++.. ....++..++++.+... +..++++.+|.+++.+. .
T Consensus 320 A~-G~~GGfi~gs~------~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~---~ 387 (476)
T PLN02955 320 AA-GCHGGFIACSK------KWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKAL---S 387 (476)
T ss_pred ch-hccCceeecHH------HHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHh---c
Confidence 97 78899999988 6777666433344444433 33344444567665433 34667888888888773 3
Q ss_pred CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673 394 GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473 (529)
Q Consensus 394 G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i 473 (529)
|+.+ .++++.+-+... .....+.+.|.+.||.|+....|- .|.+..++||++.+ .++++|++++++.|
T Consensus 388 G~~~-----~sPI~pI~ig~~-~~a~~~~~~L~~~Gi~v~~i~yPt--VP~g~~rLRi~lsA----~Ht~edId~lv~~L 455 (476)
T PLN02955 388 GVDI-----SSPIISLVVGNQ-EKALKASRYLLKSGFHVMAIRPPT--VPPNSCRLRVTLSA----AHTTEDVKKLITAL 455 (476)
T ss_pred CCCC-----CCCEEEEEeCCH-HHHHHHHHHHHHCCCEEEEECCCC--CCCCCceEEEeeCC----CCCHHHHHHHHHHH
Confidence 6653 145554444321 133557888989999997654442 23445689998765 46799999999999
Q ss_pred HHHHHH
Q 009673 474 HEGVEI 479 (529)
Q Consensus 474 ~~~~~~ 479 (529)
.++...
T Consensus 456 ~~~~~~ 461 (476)
T PLN02955 456 SSCLDF 461 (476)
T ss_pred HHHHhh
Confidence 887653
No 146
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.89 E-value=3.4e-21 Score=204.81 Aligned_cols=345 Identities=15% Similarity=0.158 Sum_probs=216.6
Q ss_pred cceeEecCCCCC-cHHHHHHHhhhhhc-cCC-CC---CCCCCCCCCchhHHHHHHHHHHHHHHHcC----CCCCCCceee
Q 009673 103 KSLELIASENFT-SRAVMEAVGSCLTN-KYS-EG---LPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNV 172 (529)
Q Consensus 103 ~~i~L~asen~~-~~~V~eal~~~l~~-~y~-~G---~p~~r~~~g~~~~d~lE~~a~~~la~~~g----~~~~~~~~~V 172 (529)
..|+|.-.||.+ ...+.+.+...... .+. .+ ....-+|.+......+.+...+++.+.+| ++++ +|
T Consensus 48 g~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~----~I 123 (447)
T PLN02607 48 GVIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPD----RI 123 (447)
T ss_pred ceEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHH----He
Confidence 358999999975 44455555443210 000 00 00112333333345666666678877776 3443 56
Q ss_pred ecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccc-cccceEEEEEcccCCC-CCCCCHHHHHHHhhh
Q 009673 173 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDES-TGLVDYDMLEKTAIL 249 (529)
Q Consensus 173 ~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~-~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~ 249 (529)
.+++|+ +|+.+++.++++|||.|++++|.|+++.. .+. ..|. ++++++++.+ ++.+|+++++++++.
T Consensus 124 vit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~--------~~~~~~g~--~vv~v~~~~~~~f~~~~~~le~a~~~ 193 (447)
T PLN02607 124 VLTAGATAANELLTFILADPGDALLVPTPYYPGFDR--------DLRWRTGV--KIVPIHCDSSNNFQVTPQALEAAYQE 193 (447)
T ss_pred EEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCCc--EEEEEeCCCCCCCcCCHHHHHHHHHH
Confidence 678987 89988989999999999999998876532 122 2343 6677777643 467999999998864
Q ss_pred -----cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccc-cCCCC------C--c-cc--E
Q 009673 250 -----FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF------K--Y-CD--V 307 (529)
Q Consensus 250 -----~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~~------~--~-aD--i 307 (529)
.++|+|++++|+||+ .. .+++|.++|++||+++|+|++ |.+.++.+. ..+.. . . .+ +
T Consensus 194 a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEi-Ya~~~f~~~~f~S~~s~~~~~~~~~~~~~v~ 272 (447)
T PLN02607 194 AEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEI-YSGSVFSASEFVSVAEIVEARGYKGVAERVH 272 (447)
T ss_pred HHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEecc-ccccccCCCCcccHHHHHhhcCCCCCcCcEE
Confidence 378999999999997 33 477888999999999999998 444443321 11100 0 0 12 6
Q ss_pred EEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh--cCchHHHHHHHHHHHH
Q 009673 308 VTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSPEFKVYQNKVVSNC 383 (529)
Q Consensus 308 v~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~--~~~~~~~~~~~i~~~a 383 (529)
++.|++|.| +|.|.|+++...+ ++...+...... .+.++..+. +++..|..- ......+.++++.+++
T Consensus 273 vi~s~SK~fg~~GlRvG~ivs~n~-----~l~~~~~~~~~~--~~~s~~~q~-~~~~~L~d~~~~~~~l~~~r~~l~~~~ 344 (447)
T PLN02607 273 IVYSLSKDLGLPGFRVGTIYSYND-----KVVTTARRMSSF--TLVSSQTQH-LLASMLSDEEFTENYIRTNRERLRKRY 344 (447)
T ss_pred EEEcchhcCCCCcceEEEEEEcCH-----HHHHHHHHHhhc--CCCCHHHHH-HHHHHhCCchhHHHHHHHHHHHHHHHH
Confidence 779999986 7899999998542 565555433211 111222222 222223210 0011245566677788
Q ss_pred HHHHHHHHhcCcEEecCCCCCceEEEccCCC---C-CcH-HHH-HHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCC
Q 009673 384 RALASRLVELGYKLVSGGSDNHLVLVDLRPM---G-IDG-ARV-EKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAM 456 (529)
Q Consensus 384 ~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~---~-i~~-~~~-~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~ 456 (529)
+.+.+.|++.|+++..+ ....++|++++.. . .+. .++ .++++++||.+. ||.. ....++++||++..
T Consensus 345 ~~~~~~L~~~gi~~~~~-~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~----pG~~f~~~~~g~fRi~fa~- 418 (447)
T PLN02607 345 EMIVQGLRRAGIECLKG-NAGLFCWMNLSPLLETPTREGELALWDSILREVKLNIS----PGSSCHCSEPGWFRVCFAN- 418 (447)
T ss_pred HHHHHHHHhCCCCcccC-CeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEc----CccccCCCCCCEEEEEecc-
Confidence 88999999888876553 3356788888531 0 111 234 355677899994 5544 22357899998643
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 457 TTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 457 tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
+.++++++..++|.+++...
T Consensus 419 ----~~~~~l~~gl~Ri~~~l~~~ 438 (447)
T PLN02607 419 ----MSEDTLEVALKRIHRFMDRR 438 (447)
T ss_pred ----CCHHHHHHHHHHHHHHHHHH
Confidence 35799999999999888644
No 147
>PRK02769 histidine decarboxylase; Provisional
Probab=99.89 E-value=2e-20 Score=194.33 Aligned_cols=316 Identities=16% Similarity=0.115 Sum_probs=211.8
Q ss_pred HHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCC-CceeeecCChHHHHHHHHHhh--cCCC
Q 009673 116 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK-WGVNVQPLSGSPANFEVYTAI--LKPH 192 (529)
Q Consensus 116 ~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~-~~~~V~~~sGs~A~~~~l~al--l~pG 192 (529)
...++.+...+.+.+ |.|...+..|.. ..++|+.+++++++++|+++++ |+ +.+++||++|..++.+. ..|+
T Consensus 36 ~~~~~~~~~~~~~n~--gnp~~~~~~g~~-~~~~e~~~~~~~a~l~g~~~~~~~G--~~TsGgTean~~a~~~ar~~~~~ 110 (380)
T PRK02769 36 YSALKRFFSFSINNC--GDPYSKSNYPLN-SFDFERDVMNFFAELFKIPFNESWG--YITNGGTEGNLYGCYLARELFPD 110 (380)
T ss_pred HHHHHHHHHhhhccC--CCccccCCCCCC-hHHHHHHHHHHHHHHhCCCCCCCCE--EEecChHHHHHHHHHHHHHhCCC
Confidence 455555555554544 455443322222 4568888999999999998654 32 23344569988776544 3688
Q ss_pred CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCC--CCCCH
Q 009673 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYP--RDFDY 268 (529)
Q Consensus 193 D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p--~~~d~ 268 (529)
++|++++.+|.+.. +.....|.... .++++ +++.+|+++|++.+++. +|.+|+++..++. ...|+
T Consensus 111 ~~ii~s~~~H~Sv~--------ka~~~lg~~~~--~V~~~-~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi 179 (380)
T PRK02769 111 GTLYYSKDTHYSVS--------KIARLLRIKSR--VITSL-PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNI 179 (380)
T ss_pred cEEEeCCCceehHH--------HHHHHcCCCCc--eeccC-CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCH
Confidence 99999888776543 23334454333 34455 36889999999999873 3888877754433 48899
Q ss_pred HHHHHHHHHhC---CEEEEecccccccccccccCCCCC---cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhc
Q 009673 269 PRMRQIADAVG---ALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 341 (529)
Q Consensus 269 ~~i~~ia~~~g---~~livD~ah~~Gli~~~~~~~~~~---~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~ 341 (529)
++|+++|+++| +|+++|+||+.+.++......+++ ++|.++.|+||++.+|.| |+++++++ ..+.+.
T Consensus 180 ~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~------~~~~~~ 253 (380)
T PRK02769 180 KEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKK------YVERIS 253 (380)
T ss_pred HHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehh------hhhhcc
Confidence 99999999998 699999998877664321111222 699999999999988998 99999983 333321
Q ss_pred c------cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCC
Q 009673 342 N------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG 415 (529)
Q Consensus 342 ~------~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~ 415 (529)
. .....+.|+++...+++++.+|+.+...++++..++..++++++.+.|++.|++++... ...++.++..
T Consensus 254 ~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p---~~~~v~f~~~- 329 (380)
T PRK02769 254 VDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNP---NSITVVFPCP- 329 (380)
T ss_pred cCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCC---CceEEEEcCC-
Confidence 1 01123467877778889999999888888999999999999999999999999987532 2233334322
Q ss_pred CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 416 IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 416 i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+ +.+ . .|..++. .++.+||.+..- .+.+.++.+.+-+.+.+.
T Consensus 330 -~-~~~---~--~~w~l~~----------~~~~~hi~~~~~----~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 330 -S-ERI---W--KKWHLAT----------SGNQAHIITMPH----HNKQQIDSLIDELIFDLK 371 (380)
T ss_pred -C-HHH---H--hCeeEcc----------cCCEEEEEECCC----CCHHHHHHHHHHHHHHHh
Confidence 1 222 1 4555532 134788865332 345777777766665554
No 148
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.89 E-value=9.2e-22 Score=202.73 Aligned_cols=281 Identities=17% Similarity=0.103 Sum_probs=191.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhhcC------------CC--CEEEEcCCCCCccccc
Q 009673 144 EYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILK------------PH--DRIMGLDLPHGGHLSH 208 (529)
Q Consensus 144 ~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs~A~~~~l~all~------------pG--D~Vl~~~~~~~g~~s~ 208 (529)
+...++|+.+++++++++|.+ .+.. .+.+++|++||+.++.++.. +| +.|+++++.|.++.
T Consensus 34 ~~~~~le~~~~~~~~~~~g~~~~~~~--~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~-- 109 (345)
T cd06450 34 PAATEMEAEVVNWLAKLFGLPSEDAD--GVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVE-- 109 (345)
T ss_pred chhHHHHHHHHHHHHHHhCCCCCCCC--EEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHH--
Confidence 456789999999999999997 2221 24456667999998888742 33 37777776665432
Q ss_pred cccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCE
Q 009673 209 GFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAYPR--DFDYPRMRQIADAVGAL 281 (529)
Q Consensus 209 g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~ 281 (529)
+.+...|. +++.+++++ ++.+|+++|++.+++. ++++|+++.+++++ ..|+++|.++|+++|++
T Consensus 110 ------~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~ 180 (345)
T cd06450 110 ------KAAAYLDV--KVRLVPVDE-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLW 180 (345)
T ss_pred ------HHHHHHhc--CeEEeeeCC-CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCe
Confidence 12233344 666666663 4689999999998752 57788777666554 78999999999999999
Q ss_pred EEEecccccccccccccC---CCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHH
Q 009673 282 LMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTI 357 (529)
Q Consensus 282 livD~ah~~Gli~~~~~~---~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~i 357 (529)
+++|++|..+........ ..+.++|++++|+||++.+|.+ |+++.+ +
T Consensus 181 l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~-----------------------------~ 231 (345)
T cd06450 181 LHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR-----------------------------A 231 (345)
T ss_pred EEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH-----------------------------H
Confidence 999999877764322111 1123689999999999877665 765432 2
Q ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEccCCC---CCcHHHHHHhHhcCCeEEc
Q 009673 358 GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPM---GIDGARVEKILDMASITLN 433 (529)
Q Consensus 358 aala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~---~i~~~~~~~~L~~~GI~v~ 433 (529)
.++..+++.+...++++..++..++++++.+.|.+. |+.++.+. +..++.+.+.+. +++..++.+.|.+.|+.+.
T Consensus 232 ~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~ 310 (345)
T cd06450 232 LKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEP-NLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHV 310 (345)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-ceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEE
Confidence 333445555545667888899999999999999884 78776532 344555555432 3455678888888865442
Q ss_pred CCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 434 ~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
.. .... .++.+|+++.... .+++|++++++.|++
T Consensus 311 ~~----~~~~-~~~~lRis~~~~~---~t~~di~~l~~~l~~ 344 (345)
T cd06450 311 PA----TTLG-GPNVLRFVVTNPL---TTRDDADALLEDIER 344 (345)
T ss_pred Ee----eEEC-CeEEEEEEecCCC---CCHHHHHHHHHHHHh
Confidence 21 1101 3568999986542 258999999998875
No 149
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.7e-20 Score=197.32 Aligned_cols=335 Identities=17% Similarity=0.173 Sum_probs=207.4
Q ss_pred cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--CCCCCCceeeecCChH
Q 009673 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSGS 178 (529)
Q Consensus 103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g--~~~~~~~~~V~~~sGs 178 (529)
+.++|..+++ .+++.+.+++...... ..+|+. ..| ..++++...+++. ..| ++++ +|.+++|+
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~---~~g---~~~lr~~ia~~~~-~~~~~~~~~----~i~~t~G~ 97 (397)
T PRK07568 31 KVYHLNIGQPDIKTPEVFFEAIKNYDEE--VLAYSH---SQG---IPELREAFAKYYK-KWGIDVEPD----EILITNGG 97 (397)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHhcC--CcCcCC---CCC---CHHHHHHHHHHHH-HhCCCCCcc----eEEEcCCh
Confidence 4577877665 3678888888754321 112322 112 2344444444444 233 3443 45567776
Q ss_pred -HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCC-CC-CCHHHHHHHhhhcCCcEE
Q 009673 179 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GL-VDYDMLEKTAILFRPKLI 255 (529)
Q Consensus 179 -~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~-~~-iD~d~le~~i~~~~pklI 255 (529)
+|+..++.++++|||+|++++|.|..+.. .....|. ++++++++.++ +. .|++++++.+++ ++++|
T Consensus 98 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~g~~~~~~~~l~~~~~~-~~~~v 166 (397)
T PRK07568 98 SEAILFAMMAICDPGDEILVPEPFYANYNG--------FATSAGV--KIVPVTTKIEEGFHLPSKEEIEKLITP-KTKAI 166 (397)
T ss_pred HHHHHHHHHHhcCCCCEEEEecCCCccHHH--------HHHHcCC--EEEEeecCcccCCCCCCHHHHHHhcCc-cceEE
Confidence 89998999999999999999987654321 1233454 55666665333 33 468999999877 88999
Q ss_pred EEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccc-cCCCCC--c-cc--EEEecccccc--cCCCCe
Q 009673 256 IAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK--Y-CD--VVTTTTHKSL--RGPRGG 322 (529)
Q Consensus 256 i~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~~~--~-aD--iv~~S~hK~l--~GprgG 322 (529)
++++|+||+ .. ++++|.++|+++|+++++|++ |.++.+.+. .++... . .+ +++.|+||++ +|.|.|
T Consensus 167 ~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~-y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G 245 (397)
T PRK07568 167 LISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEV-YREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIG 245 (397)
T ss_pred EEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEecc-chhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceE
Confidence 888888887 33 578999999999999999998 445544332 112111 1 22 7889999987 588999
Q ss_pred EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCC
Q 009673 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG 401 (529)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~g 401 (529)
|++++++ ++.+.+....... .+.+...+.+ ++.+++.. ...+++..+.+.++++.+.+.|.+. |+.+..+
T Consensus 246 ~~~~~~~-----~~~~~~~~~~~~~-~~~s~~~q~~-~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p- 316 (397)
T PRK07568 246 CLISKNK-----ELIAAAMKLCQAR-LSPPTLEQIG-AAALLDTP-ESYFDEVREEYKKRRDILYEELNKIPGVVCEKP- 316 (397)
T ss_pred EEecCCH-----HHHHHHHHHhhcc-CCCCcHHHHH-HHHHhhCC-HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC-
Confidence 9998642 5655543322111 2333333333 33345421 1234666777888899999999874 6665543
Q ss_pred CCCceEEEccCCCCCcHHHHHHhH-hc-----CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 402 SDNHLVLVDLRPMGIDGARVEKIL-DM-----ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 402 t~~~~~~v~~~~~~i~~~~~~~~L-~~-----~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
..++++|+++.. .+..++.+.| ++ .||.+.++...+......+++|||++. .+++++++..+.|.+
T Consensus 317 ~g~~~~~~~l~~--~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~------~~~~~~~~~~~~l~~ 388 (397)
T PRK07568 317 KGAFYIIAKLPV--DDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV------LNEEDLKRAMEILKE 388 (397)
T ss_pred CcceEEEEecCC--CCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe------CCHHHHHHHHHHHHH
Confidence 234556777753 2455565555 33 699984432111111123468999963 346899999999988
Q ss_pred HHHH
Q 009673 476 GVEI 479 (529)
Q Consensus 476 ~~~~ 479 (529)
+++.
T Consensus 389 ~l~~ 392 (397)
T PRK07568 389 ALEK 392 (397)
T ss_pred HHHH
Confidence 7764
No 150
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=6.5e-22 Score=204.64 Aligned_cols=277 Identities=17% Similarity=0.134 Sum_probs=186.5
Q ss_pred HHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCC-CEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673 154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (529)
Q Consensus 154 ~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v 231 (529)
++++++.+|++++ +|.+++|+ +++..++.++++|| |+|++++|.|+.+ ...+...|. +++.+++
T Consensus 63 ~~~~a~~~g~~~~----~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y--------~~~~~~~G~--~~~~v~~ 128 (351)
T PRK01688 63 IENYAAYAGVKPE----QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMY--------SVSAETIGV--EIRTVPT 128 (351)
T ss_pred HHHHHHHhCCCHH----HEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHH--------HHHHHHcCC--EEEEeec
Confidence 4778889999885 56779998 89999999999997 9999999876432 112344565 6666666
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCCC-ccc
Q 009673 232 DESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-YCD 306 (529)
Q Consensus 232 ~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~-~aD 306 (529)
+ +++.+|++++++.+ + ++++|++++|+||+ ..+.+++.++++.. +++||+|+++. .+.........+. +..
T Consensus 129 ~-~~~~~d~~~l~~~~-~-~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~-~f~~~~s~~~~~~~~~n 204 (351)
T PRK01688 129 L-DNWQLDLPAIADNL-D-GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYI-EFCPQASLAGWLAEYPH 204 (351)
T ss_pred C-CCCCCCHHHHHHhc-c-CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchh-hcCCCCChHHHHhhCCC
Confidence 5 35889999999887 4 79999999999997 66777766666532 68999999953 3321110000011 222
Q ss_pred -EEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673 307 -VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (529)
Q Consensus 307 -iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a 383 (529)
+++.|+||++ +|.|.||+++++ ++.+.+.+...+...+ ...+.+| ..+|.....+.+++..+++.+++
T Consensus 205 ~iv~rSfSK~~glaGlRiGy~i~~~------~~i~~l~~~~~~~~v~--~~~~~~a-~~~L~~~~~~~~~~~~~~~~~~r 275 (351)
T PRK01688 205 LVILRTLSKAFALAGLRCGFTLANE------EVINLLLKVIAPYPLS--TPVADIA-AQALSPQGIAAMRERVAEINANR 275 (351)
T ss_pred EEEEecchHhhcCHHHHHhHHhCCH------HHHHHHHhccCCCCCC--HHHHHHH-HHHHhcchHHHHHHHHHHHHHHH
Confidence 7889999986 688999999987 6777776654443211 2222222 22343210123466677888889
Q ss_pred HHHHHHHHhc-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673 384 RALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 462 (529)
Q Consensus 384 ~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~ 462 (529)
+++.+.|.+. |+..+.+ +..+++++++. +.+++.+.|.++||.|.... ..+..++++||++. +
T Consensus 276 ~~l~~~L~~~~~~~~~~p-s~~nfi~~~~~----~~~~l~~~L~~~gi~vr~~~----~~~~~~~~iRis~~-------~ 339 (351)
T PRK01688 276 QWLIAALKEIPCVEQVFD-SETNYILARFT----ASSAVFKSLWDQGIILRDQN----KQPGLSNCLRITIG-------T 339 (351)
T ss_pred HHHHHHHHhCCCCCeECC-CCCcEEEEEcC----CHHHHHHHHHHCCeEEEECC----CcCCCCCeEEEeCC-------C
Confidence 9999999885 6643333 23566777764 45778888888999996432 11113578999864 3
Q ss_pred HHHHHHHHHHH
Q 009673 463 EKEFVAIADFI 473 (529)
Q Consensus 463 ~~d~~~la~~i 473 (529)
++|++++.+.|
T Consensus 340 ~~e~~~l~~al 350 (351)
T PRK01688 340 REECQRVIDAL 350 (351)
T ss_pred HHHHHHHHHhh
Confidence 69999998876
No 151
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.89 E-value=8.7e-21 Score=215.06 Aligned_cols=353 Identities=18% Similarity=0.163 Sum_probs=227.8
Q ss_pred cceeEec-CCCCCcH-HHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIA-SENFTSR-AVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~a-sen~~~~-~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.+.|.. +-.++++ .|.+++...+.+.+ ++|...+..+....+.++ .+++.+++++|++++++ .|..|+|+ +
T Consensus 34 ~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~--~np~s~~~~s~~~~~~~e-~aR~~ia~~lga~~~~~--~VvFtsnaT~ 108 (805)
T PLN02724 34 GVVYLDHAGATLYSESQLEAALADFSSNVY--GNPHSQSDSSMRSSDTIE-SARQQVLEYFNAPPSDY--ACVFTSGATA 108 (805)
T ss_pred CCEeEeCCCCCCCCHHHHHHHHHHHHhhcc--CCCCcCcchhhhHHHHHH-HHHHHHHHHhCCCccce--EEEEeCChHH
Confidence 4566653 4455555 55555544444333 344433333444455555 68899999999986542 34456655 8
Q ss_pred HHHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-------CCCCCCH--HHHHHHhh-
Q 009673 180 ANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-------STGLVDY--DMLEKTAI- 248 (529)
Q Consensus 180 A~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-------~~~~iD~--d~le~~i~- 248 (529)
|+..+..++ +++||+|++...+|.+.+.... .....|. ++..++++. +.+.+|. ++|++.++
T Consensus 109 alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~-----~a~~~G~--~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~ 181 (805)
T PLN02724 109 ALKLVGETFPWSSESHFCYTLENHNSVLGIRE-----YALEKGA--AAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTS 181 (805)
T ss_pred HHHHHHHHCCCCCCCeEEEeeccccchHHHHH-----HHHHcCC--eEEeccchhccccccccccccccchhhhhhhhhh
Confidence 988888887 7899999998888877653211 1112344 444444431 1234443 66766542
Q ss_pred --------hcCCcEEEEcC-CC-CCCCCCHHHHHHHHHHh--------CCEEEEecccccccccccccCCCCCcccEEEe
Q 009673 249 --------LFRPKLIIAGA-SA-YPRDFDYPRMRQIADAV--------GALLMMDMAHISGLVAASVVADPFKYCDVVTT 310 (529)
Q Consensus 249 --------~~~pklIi~~~-s~-~p~~~d~~~i~~ia~~~--------g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~ 310 (529)
..++++|++.+ +| .+...|++.|..+++.. ++++++|+||+.|.+..++... ++|++++
T Consensus 182 ~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~---~~Dfl~~ 258 (805)
T PLN02724 182 KLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRY---PADFVVV 258 (805)
T ss_pred hhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhc---CCCEEEE
Confidence 12567888874 33 33488999876655532 3579999999999876554322 5899999
Q ss_pred cccccccCCCC-eEEEeeCCCcchhHHHhhhccccc-----------------------CCCCCCChHHHHHHHHHHHHH
Q 009673 311 TTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVF-----------------------PGLQGGPHNHTIGGLAVCLKH 366 (529)
Q Consensus 311 S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~-----------------------p~~~g~p~~~~iaala~al~~ 366 (529)
|+|||++||.| |+++++++ +.+.+....+ ....|+++...++++..|++.
T Consensus 259 S~HK~~GgP~G~G~L~vr~~------~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~ 332 (805)
T PLN02724 259 SFYKIFGYPTGLGALLVRRD------AAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKL 332 (805)
T ss_pred ecceeccCCCCceEEEEehh------hhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHH
Confidence 99999988998 99999883 3332221111 123688999999999999998
Q ss_pred hcCchHHHHHHHHHHHHHHHHHHHHhc-------CcEEecCC-------CCCceEEEccCC---CCCcHHHHHHhHhcCC
Q 009673 367 AQSPEFKVYQNKVVSNCRALASRLVEL-------GYKLVSGG-------SDNHLVLVDLRP---MGIDGARVEKILDMAS 429 (529)
Q Consensus 367 ~~~~~~~~~~~~i~~~a~~l~~~L~~~-------G~~v~~~g-------t~~~~~~v~~~~---~~i~~~~~~~~L~~~G 429 (529)
+...+++...++....++++.+.|.+. ++.++.+. ....++.+.+.. ..+...++.+++.+.|
T Consensus 333 l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~g 412 (805)
T PLN02724 333 LNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSG 412 (805)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcC
Confidence 876677888888889999999999874 36666432 011233333321 1133456777778899
Q ss_pred eEEcCCCC--CCCC-C---------------------------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 430 ITLNKNSV--PGDK-S---------------------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 430 I~v~~~~~--Pg~~-~---------------------------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
|.++.+.. |+-. . ....+.+|+|+.+++| ++|+++++++|++....
T Consensus 413 I~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt----~eDvd~lv~~l~~~~~~ 488 (805)
T PLN02724 413 IQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMST----FEDCQKFIDFIISSFVS 488 (805)
T ss_pred cEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCC----HHHHHHHHHHHHHHhhc
Confidence 99976542 2200 0 0013779999998886 79999999999997754
Q ss_pred H
Q 009673 480 T 480 (529)
Q Consensus 480 ~ 480 (529)
.
T Consensus 489 ~ 489 (805)
T PLN02724 489 T 489 (805)
T ss_pred C
Confidence 3
No 152
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.5e-20 Score=197.57 Aligned_cols=336 Identities=18% Similarity=0.136 Sum_probs=210.4
Q ss_pred ceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCChH-
Q 009673 104 SLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGS- 178 (529)
Q Consensus 104 ~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V~~~sGs- 178 (529)
.++|..+.. ++++.+.+++...+...... ..+ |+.......+++.+.+++.+.++. +++ +|.+++|+
T Consensus 35 ~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~---~~~-y~~~~g~~~lr~~ia~~l~~~~~~~~~~~----~i~~t~G~~ 106 (394)
T PRK06836 35 VFDFSLGNPSVPPPAAVKEALRELAEEEDPG---LHG-YMPNAGYPEVREAIAESLNRRFGTPLTAD----HIVMTCGAA 106 (394)
T ss_pred eEEecCcCCCCCCCHHHHHHHHHHHhcCCcC---ccc-CCCCCCCHHHHHHHHHHHHHHhCCCCCcC----cEEEeCChH
Confidence 467765543 35788999987665432110 011 222223345555555666665554 343 45667776
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
+++..++.++++|||.|++++|.+.++.. .....|. +++.++++++++.+|++++++.+++ ++++|+++
T Consensus 107 ~al~~~~~~l~~~gd~Vli~~p~~~~~~~--------~~~~~g~--~v~~v~~~~~~~~~d~~~l~~~~~~-~~~~v~~~ 175 (394)
T PRK06836 107 GALNVALKAILNPGDEVIVFAPYFVEYRF--------YVDNHGG--KLVVVPTDTDTFQPDLDALEAAITP-KTKAVIIN 175 (394)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCC--EEEEEecCCccCcCCHHHHHhhcCc-CceEEEEe
Confidence 89999999999999999999987765421 2233454 6777777765678999999999977 89999998
Q ss_pred CCCCCC--CCC---HHHHHHHHHH------hCCEEEEeccccccccccccc-CCCCC--cccEEEecccccc--cCCCCe
Q 009673 259 ASAYPR--DFD---YPRMRQIADA------VGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSL--RGPRGG 322 (529)
Q Consensus 259 ~s~~p~--~~d---~~~i~~ia~~------~g~~livD~ah~~Gli~~~~~-~~~~~--~aDiv~~S~hK~l--~GprgG 322 (529)
+++||+ ..+ +++|.++|++ ||+++++|+++ ..+...+.. +..+. ...++++|++|.+ +|.|.|
T Consensus 176 ~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG 254 (394)
T PRK06836 176 SPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPY-REIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIG 254 (394)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccc-cccccCCCCCCChHHccCcEEEEecchhhccCcceeeE
Confidence 889987 444 6677788888 89999999984 445443211 11111 2348889999987 588899
Q ss_pred EEEeeCCCcchhHHHhhhcccc-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCC
Q 009673 323 MIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG 401 (529)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~g 401 (529)
|+++++.......+...+.... ..+....+.. ...+++..+. .. ...+.+.++++.+.+.|++.|+.+..+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~q~~~~~~l~----~~--~~~~~~~~~r~~l~~~L~~~g~~~~~~~ 327 (394)
T PRK06836 255 YIAVNPEMEDADDLVAALVFANRILGFVNAPAL-MQRVVAKCLD----AT--VDVSIYKRNRDLLYDGLTELGFECVKPQ 327 (394)
T ss_pred EEecCHHHhhhHHHHHHHHHHhhccccccCCHH-HHHHHHHHhC----Ch--HHHHHHHHHHHHHHHHHHhCCCEeecCC
Confidence 9999863100000111111110 0011122222 2222222222 21 1245567778888899988888766542
Q ss_pred CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 402 SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 402 t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
.++++|+.+.. .+..++.+.|.++||.+. ||.... .++++||++. .+++++++..+.|+++++..
T Consensus 328 -gg~~~~~~~~~--~~~~~~~~~l~~~gv~v~----~g~~f~-~~~~iRi~~~------~~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 328 -GAFYLFPKSPE--EDDVAFCEKAKKHNLLLV----PGSGFG-CPGYFRLSYC------VDTETIERSLPAFEKLAKEY 392 (394)
T ss_pred -ceEEEEEeCCC--CCHHHHHHHHHhCCEEEE----CchhcC-CCCeEEEEec------CCHHHHHHHHHHHHHHHHHh
Confidence 34566666543 356777788889999995 443311 2578999974 34799999999998888643
No 153
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.89 E-value=5.3e-21 Score=198.09 Aligned_cols=314 Identities=16% Similarity=0.139 Sum_probs=206.1
Q ss_pred ceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HH
Q 009673 104 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 180 (529)
Q Consensus 104 ~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A 180 (529)
.++|..++|+ +|+.+.+++...+.. ..+||. .. ..+++ +.++++++++++ +|.+++|+ ++
T Consensus 21 ~~~l~~~~~~~~~p~~~~~a~~~~~~~--~~~Y~~------~~-~~~lr----~~ia~~~~~~~~----~i~it~Ga~~~ 83 (354)
T PRK06358 21 ILDFSANINPLGVPESLKQAITENLDK--LVEYPD------PD-YLELR----KRIASFEQLDLE----NVILGNGATEL 83 (354)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHh--hhcCCC------cc-HHHHH----HHHHHHhCCChh----hEEECCCHHHH
Confidence 5788877775 588999998876532 122332 11 23343 667777888875 56679998 88
Q ss_pred HHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 181 ~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
+..++.++ .+ |.|++++|.|+.+. ......|. +++.++++.+ ++.+| +++.+.+.. ++++|+++.
T Consensus 84 l~~~~~~~-~~-~~v~i~~P~y~~~~--------~~~~~~g~--~~~~~~~~~~~~~~~d-~~~~~~~~~-~~~~v~~~~ 149 (354)
T PRK06358 84 IFNIVKVT-KP-KKVLILAPTFAEYE--------RALKAFDA--EIEYAELTEETNFAAN-EIVLEEIKE-EIDLVFLCN 149 (354)
T ss_pred HHHHHHHh-CC-CcEEEecCChHHHH--------HHHHHcCC--eeEEEeCccccCCCcc-HHHHHhhcc-CCCEEEEeC
Confidence 88888876 44 68889998775432 12234454 5666666543 46789 666666665 799998888
Q ss_pred CCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC---Cccc--EEEecccccc--cCCCCeEEEee
Q 009673 260 SAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCD--VVTTTTHKSL--RGPRGGMIFFK 327 (529)
Q Consensus 260 s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~~aD--iv~~S~hK~l--~GprgG~i~~~ 327 (529)
|+||+ .. .+++|.++|+++|+++|+|++ |..+...+....++ +..+ +++.|++|++ +|.|.||++++
T Consensus 150 P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~-Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~ 228 (354)
T PRK06358 150 PNNPTGQLISKEEMKKILDKCEKRNIYLIIDEA-FMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTS 228 (354)
T ss_pred CCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCc-ccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecC
Confidence 99997 34 477888889999999999998 44555433212211 1112 7889999986 79999999986
Q ss_pred CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchH-HHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCc
Q 009673 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNH 405 (529)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~ 405 (529)
++ .+.+.+.....+. +.....+. +...++. ...+ ++.++.+.++++.+.+.|++. |+.+..+. ..
T Consensus 229 ~~-----~~~~~~~~~~~~~--~~~~~~q~-~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~--g~ 295 (354)
T PRK06358 229 NK-----NLAEKLLQMREPW--SINTFADL-AGQTLLD---DKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPS--VN 295 (354)
T ss_pred CH-----HHHHHHHHhCCCC--cchHHHHH-HHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCc--ce
Confidence 42 5666665443221 11122222 2222332 2233 667778888899999999874 77666542 34
Q ss_pred eEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 406 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 406 ~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
++|+.+.. ..++.+.|.++||.+.. |+. +...+++|||++. +.++++++.+.+++++
T Consensus 296 f~~~~~~~----~~~~~~~l~~~gI~v~~----~~~f~~~~~~~iRls~~-------~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 296 FIFFKLEK----PIDLRKELLKKGILIRS----CSNYRGLDENYYRVAVK-------SREDNKKLLKALEVIL 353 (354)
T ss_pred EEEEEcCc----hHHHHHHHHHCCeEEEE----CCCCCCCCCCEEEEEeC-------CHHHHHHHHHHHHHHh
Confidence 67776642 35677777788999954 443 1223578999863 3699999999998765
No 154
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=9.2e-21 Score=196.54 Aligned_cols=313 Identities=16% Similarity=0.139 Sum_probs=202.3
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.++|..++|+ +|+.+++++.+.+.. ..+||. .| ...+. +.+++.++++++ +|.+++|+ +
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~----~~---~~~lr----~~ia~~~~~~~~----~I~it~G~~~ 93 (357)
T PRK14809 31 DLVKLSSNENPHGPSPAAVEAIREAAER--VHSYPK----AS---HADLT----AALADRWDVSPE----QVWLANGGDG 93 (357)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhh--hhcCCC----CC---HHHHH----HHHHHHhCCCcc----eEEECCCHHH
Confidence 56888888774 678899998776542 123432 11 22333 556677788875 56678888 8
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
++..++.++++|||.|++++|.|..+. ......|. .++.++++. +++.+|.+++++.. + ++|+|+++
T Consensus 94 al~~~~~~~~~~gd~V~v~~P~y~~~~--------~~~~~~g~--~~~~~~l~~~~~~~~~~~~~~~~~-~-~~k~i~l~ 161 (357)
T PRK14809 94 ALDYLARAMLDPGDTVLVPDPGFAYYG--------MSARYHHG--EVREYPVSKADDFEQTADTVLDAY-D-GERIVYLT 161 (357)
T ss_pred HHHHHHHHhcCCCCEEEEeCCChHHHH--------HHHHHcCC--eEEEEecccCcCCCcCHHHHHHhh-c-CCcEEEEe
Confidence 999999999999999999998764221 12234454 444444543 34678888887765 2 68999999
Q ss_pred CCCCCC--CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCCC-c-ccEEEecccccc--cCCCCeEEEeeCCC
Q 009673 259 ASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKSL--RGPRGGMIFFKKDP 330 (529)
Q Consensus 259 ~s~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~-~-aDiv~~S~hK~l--~GprgG~i~~~~~~ 330 (529)
+|+||+ ..+.+++.++++.. +++||+|+++. .+...+.....++ . --+++.|++|++ +|+|.||+++++
T Consensus 162 ~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~-- 238 (357)
T PRK14809 162 SPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYG-EFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE-- 238 (357)
T ss_pred CCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhh-hccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--
Confidence 999997 67777777776654 78999999853 3432211000011 1 127789999987 699999999987
Q ss_pred cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEE
Q 009673 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 409 (529)
Q Consensus 331 ~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v 409 (529)
++.+++.+...+. +.+...+.+++ .+|. .++ +++..+.+.++++.+.+.|...++ .+ ...++|+
T Consensus 239 ----~~~~~~~~~~~~~--~~~~~~~~~a~-~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~---~~--~g~f~~~ 303 (357)
T PRK14809 239 ----EWADAYARVNTPF--AASELACRAGL-AALD---DDEHVERTVETARWAREYIREELDAPTW---ES--AGNFVLA 303 (357)
T ss_pred ----HHHHHHHHhCCCC--CCCHHHHHHHH-HHhC---CHHHHHHHHHHHHHHHHHHHHHhcCccC---CC--CCCEEEE
Confidence 6777776543222 22222222222 2332 223 356666777777778787754322 22 2456777
Q ss_pred ccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 410 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 410 ~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
++. +..++.+.|+++||.|.. |.... .+++|||++. +.+++++..++|+++++
T Consensus 304 ~~~----~~~~~~~~l~~~gv~v~~----g~~f~-~~~~iRls~~-------~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 304 EVG----DASAVAEAAQERGVIVRD----CTSFG-LPECIRITCG-------TREETERAVEVLNEVLA 356 (357)
T ss_pred ECC----CHHHHHHHHHHCCEEEEE----CccCC-CCCeEEEecC-------CHHHHHHHHHHHHHHhc
Confidence 663 456777888899999954 33211 2478999852 26899999998887653
No 155
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.89 E-value=5.1e-21 Score=199.25 Aligned_cols=320 Identities=13% Similarity=0.120 Sum_probs=206.3
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCC
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 191 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~p 191 (529)
..+++.++++...+...+- ++..+...++| +++++++|.+. .|.+.+|++|+..++.++ ++|
T Consensus 8 ~~~~~e~~a~~~~~~~~~~--------~~~g~~~~~~e----~~la~~~g~~~-----~v~~~sgt~aL~~~l~al~~~p 70 (376)
T TIGR02379 8 PVTGQELEYIAEAISEGKL--------SGDGPFSRRCE----TWLENRTGTKK-----ALLTPSCTAALEMAALLLDIQP 70 (376)
T ss_pred CCCHHHHHHHHHHHHcCCc--------cCCcHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCC
Confidence 3566678888777755432 11124456666 67888888864 245577779999888888 899
Q ss_pred CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHH
Q 009673 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRM 271 (529)
Q Consensus 192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i 271 (529)
||+|++++++|.+... .+...|. +++.++++++++.+|++++++.+++ ++|+|+.+++ ++...|+++|
T Consensus 71 Gd~Viv~~~t~~~~~~--------~~~~~G~--~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~~~-~G~~~d~~~I 138 (376)
T TIGR02379 71 GDEVIMPSYTFVSTAN--------AFVLRGA--KIVFVDIRPDTMNIDETLIESAITH-RTKAIVPVHY-AGVACDMDTI 138 (376)
T ss_pred cCEEEECCCCcHHHHH--------HHHHcCC--EEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEeCC-CCCccCHHHH
Confidence 9999999987755421 2334454 7888888877788999999999987 8999986543 4567899999
Q ss_pred HHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccc--cc-cCCCCeEEEeeCCCcchhHHHhhhcccccCCC
Q 009673 272 RQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHK--SL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGL 348 (529)
Q Consensus 272 ~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK--~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~ 348 (529)
.++|+++|++||+|++|+.|....+..... ..|+.++|+|+ .+ +|++||+++++++ ++.++++.....|.
T Consensus 139 ~~la~~~~i~vIeDaa~~~g~~~~~~~~g~--~~~~~~fSf~~~K~l~~g~~gG~v~~~~~-----~~~~~~~~~~~~g~ 211 (376)
T TIGR02379 139 MALANKHQLFVIEDAAQGVMSTYKGRALGS--IGHLGTFSFHETKNYTSGGEGGALLINDQ-----AFIERAEIIREKGT 211 (376)
T ss_pred HHHHHHCCCEEEEECccccCCccCCcccCC--CCCEEEEeCCCCCcCcccCCceEEEECCH-----HHHHHHHHHHHhCC
Confidence 999999999999999998876443321111 35788888875 44 5779999999864 55555432111000
Q ss_pred -----------------CCC-ChHHHH-HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc---C-cEEe--cCCC-
Q 009673 349 -----------------QGG-PHNHTI-GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL---G-YKLV--SGGS- 402 (529)
Q Consensus 349 -----------------~g~-p~~~~i-aala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~---G-~~v~--~~gt- 402 (529)
.|. ..+..+ ||+. +.++ ..+++..++.+++++.+.+.|.+. + ..+. .++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g--~~qL--~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~ 287 (376)
T TIGR02379 212 NRSQFFRGEVDKYTWRDIGSSYLPSELQAAYL--WAQL--EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQ 287 (376)
T ss_pred CCccccccCCCcceeeeecccCCccHHHHHHH--HHHH--HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCe
Confidence 111 111122 3322 2222 234566677777777788887653 2 2221 1121
Q ss_pred -CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCC----CC-------------CCeEEEccCCCccCCCCHH
Q 009673 403 -DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSA----LV-------------PGGIRIGSPAMTTRGFSEK 464 (529)
Q Consensus 403 -~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~----~~-------------~~~iRig~~~~tt~g~~~~ 464 (529)
..|++++.+.. +.+.+++.+.|.++||.++..+.|.+..+ +. ...|.+ |.. .+++++
T Consensus 288 ~~~~~~~i~~~~-~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~L--P~~--~~l~~~ 362 (376)
T TIGR02379 288 HNAHMFYIKLKD-EDDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRL--PLY--YGLSKE 362 (376)
T ss_pred eeeEEEEEEECC-cCCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEc--cCC--CCCCHH
Confidence 11344454532 34678899999999999876555554311 10 112444 322 358899
Q ss_pred HHHHHHHHHHHHH
Q 009673 465 EFVAIADFIHEGV 477 (529)
Q Consensus 465 d~~~la~~i~~~~ 477 (529)
|++++++.|++++
T Consensus 363 ~~~~i~~~i~~~~ 375 (376)
T TIGR02379 363 DQARVIQTICDYL 375 (376)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998764
No 156
>PRK05839 hypothetical protein; Provisional
Probab=99.89 E-value=9.6e-21 Score=197.61 Aligned_cols=325 Identities=14% Similarity=0.116 Sum_probs=201.4
Q ss_pred cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
..++|..+++ .+++.+.+++..... . ...|+. .....++.+...+++++.+|.+.+. -+|.+++|+ +
T Consensus 25 ~~i~l~~~~p~~~~~~~~~~a~~~~~~-~-~~~Y~~------~~G~~~lr~aia~~l~~~~g~~~~~--~~I~it~G~~~ 94 (374)
T PRK05839 25 KGLDLTIGEPQFETPKFIQDALKNNAH-L-LNKYPK------SAGEESLREAQRGFFKRRFKIELKE--NELIPTFGTRE 94 (374)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHhh-c-cCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCc--ceEEEecCcHH
Confidence 4577877775 367888888876432 1 122332 1122355556668888888853221 367889998 7
Q ss_pred HHHHHHHhhc--CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEE
Q 009673 180 ANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLII 256 (529)
Q Consensus 180 A~~~~l~all--~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi 256 (529)
|+..++.+++ ++||.|++++|.|..+.. .....|. ++++++++++ ++.+|.++.+ + + ++|+|+
T Consensus 95 al~~~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~~~d~~~~~--~-~-~~k~v~ 160 (374)
T PRK05839 95 VLFNFPQFVLFDKQNPTIAYPNPFYQIYEG--------AAIASRA--KVLLMPLTKENDFTPSLNEKE--L-Q-EVDLVI 160 (374)
T ss_pred HHHHHHHHHhcCCCCCEEEECCCCchhhHH--------HHHhcCC--EEEEeecccccCCcCCcchhh--h-c-cccEEE
Confidence 8877777764 589999999987754421 2334554 7777777643 3667765442 2 3 689999
Q ss_pred EcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC---------c-ccEEEeccccc--ccCC
Q 009673 257 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK---------Y-CDVVTTTTHKS--LRGP 319 (529)
Q Consensus 257 ~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~---------~-aDiv~~S~hK~--l~Gp 319 (529)
+++|+||+ .. .+++|.++|+++|++||+|+++. .+...+..++.+. + --+++.|++|. ++|.
T Consensus 161 i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~-~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl 239 (374)
T PRK05839 161 LNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYS-EIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGL 239 (374)
T ss_pred EeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchh-hcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccc
Confidence 99999997 33 46778888999999999999843 3332211111110 1 12788999997 4899
Q ss_pred CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec
Q 009673 320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (529)
Q Consensus 320 rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~ 399 (529)
|.||+++++ ++.+++.........+.+...+.++. .++. .....++..+++.++++.+.+.| |+. .+
T Consensus 240 RiG~ii~~~------~~~~~~~~~~~~~~~~~~~~~q~~~~-~~l~--~~~~~~~~~~~~~~~~~~~~~~l---~~~-~p 306 (374)
T PRK05839 240 RSGFIAGDA------SILKKYKAYRTYLGCASPLPLQKAAA-VAWL--DDEHAEFFRNIYAKNLKLAREIL---GIT-IP 306 (374)
T ss_pred eeEEEecCH------HHHHHHHHHHhhcCCCCChHHHHHHH-HHhc--cchHHHHHHHHHHHHHHHHHHhc---CCC-CC
Confidence 999999986 67766654322111233333333332 2332 12233666777777777766654 443 22
Q ss_pred CCCCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 400 GGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 400 ~gt~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
..+.++|+++. +..++.+.| +++||.|.++...+. ....++++||++. .+++++++..+.|.+++.
T Consensus 307 --~gg~fi~~~~~----~~~~~~~~l~~~~gi~v~pg~~f~~-~~~~~~~iRis~~------~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 307 --PATFYVWLPVD----NDEEFTKKLYQNEGIKVLPGSFLGR-NGIGKGYVRIALV------YDTPKLEKALEIIKTYLE 373 (374)
T ss_pred --CeeEEEEEeCC----ChHHHHHHHHHHCCEEEeCchhhCC-CCCCCCeEEEEec------CCHHHHHHHHHHHHHHhh
Confidence 23567788774 234555555 569999954322111 1113589999973 247888888888887764
No 157
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.88 E-value=2.2e-20 Score=194.03 Aligned_cols=316 Identities=17% Similarity=0.220 Sum_probs=213.4
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccc
Q 009673 136 GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKR 215 (529)
Q Consensus 136 ~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~ 215 (529)
|...|+|.+...++| +.+++++|.++ .|.++||+.|+..++...++|||+| +...+ +. +...
T Consensus 70 GDd~Yagd~s~~~LE----~~vAe~lG~e~-----aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~---f~----Tt~a 131 (460)
T PRK13237 70 GDEAYAGSRNFYHLE----ETVQEYYGFKH-----VVPTHQGRGAENLLSRIAIKPGQYV--PGNMY---FT----TTRY 131 (460)
T ss_pred cchhhcCCCcHHHHH----HHHHHHHCCCe-----EEEeCCHHHHHHHHHHhCCCCcCEE--CCccc---hH----hhHH
Confidence 333467777788888 67788999986 3667899999998766668999976 33222 11 1111
Q ss_pred ccccccceEEEEEcc---------cCCCCCCCCHHHHHHHhhhcC---CcEEEEc--CCCCCC-C---CCHHHHHHHHHH
Q 009673 216 RVSGTSIYFESMPYR---------LDESTGLVDYDMLEKTAILFR---PKLIIAG--ASAYPR-D---FDYPRMRQIADA 277 (529)
Q Consensus 216 ~i~~~g~~~~~v~~~---------v~~~~~~iD~d~le~~i~~~~---pklIi~~--~s~~p~-~---~d~~~i~~ia~~ 277 (529)
.+...|. ..+.+. .++.++.+|+++|++.|++.. +.+|.+. .+.+++ . .++++|.++|++
T Consensus 132 hI~~~Ga--~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~ 209 (460)
T PRK13237 132 HQELNGG--IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDK 209 (460)
T ss_pred HHHhCCc--EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHH
Confidence 1334444 222221 124578999999999998632 2233222 222222 2 478999999999
Q ss_pred hCCEEEEecccccc---ccc---ccccCCC--------CCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhccc
Q 009673 278 VGALLMMDMAHISG---LVA---ASVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA 343 (529)
Q Consensus 278 ~g~~livD~ah~~G---li~---~~~~~~~--------~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~ 343 (529)
||+.||.|+||..| +|- .+....+ +.++|.+++|+||.+.++-||+|+++++ ++.++++..
T Consensus 210 ~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~D~-----eL~~~~r~~ 284 (460)
T PRK13237 210 HGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMNDE-----ELFDEAKEL 284 (460)
T ss_pred cCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEECCH-----HHHHHHHHh
Confidence 99999999999988 331 1111222 2479999999999998888999999986 888887765
Q ss_pred --ccCCC--CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC-----
Q 009673 344 --VFPGL--QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM----- 414 (529)
Q Consensus 344 --~~p~~--~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~----- 414 (529)
.++|+ .|+.....++|++++|.+... .+|.++..++.++|.+.|.+.|++++.+ +..|-+++|....
T Consensus 285 ~~~~eG~~tygg~~grd~~alAvgl~E~~~---~~y~~~ri~~~~~l~~~L~~~Gvpv~~p-~ggH~v~vda~~~lph~~ 360 (460)
T PRK13237 285 VVVYEGMPSYGGMAGRDMEAMAIGIEESVQ---YEYIEHRVGQVRYLGEKLLAAGVPIVEP-VGGHAVFLDARRFLPHLP 360 (460)
T ss_pred ccccCCCcCCCChhhhHHHHHHhHHHhhch---HHHHHHHHHHHHHHHHHHHHCCCceecC-CCceEEEEEhHHhCCCCC
Confidence 44453 445444578899988987654 3788889999999999999999999975 3468888875421
Q ss_pred --CCcHHHH-HHhHhcCCeEEc-CCCC-----CCCCCCCCC--CeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 009673 415 --GIDGARV-EKILDMASITLN-KNSV-----PGDKSALVP--GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEA 483 (529)
Q Consensus 415 --~i~~~~~-~~~L~~~GI~v~-~~~~-----Pg~~~~~~~--~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~ 483 (529)
...++.+ ..+..+.||... .+++ |.......+ .-+|+.+|- |-+|.+.|+.+++.|..+.++...+
T Consensus 361 ~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaipr---r~yt~~h~~~v~~~~~~~~~~~~~~ 437 (460)
T PRK13237 361 QDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPR---RVYTYAHMDVVADSVIKLYKHREDI 437 (460)
T ss_pred cccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeecccc---ccccHHHHHHHHHHHHHHHHhHhhc
Confidence 2223443 444467888642 2221 111111111 469998764 5588999999999999998876544
No 158
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.88 E-value=1.5e-20 Score=195.12 Aligned_cols=316 Identities=14% Similarity=0.103 Sum_probs=204.6
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.++|..++|+ +|+.+++++...+.. ..+|+. .. ..+++ +.+++.++++++ +|.+++|+ +
T Consensus 23 ~~i~l~~~~n~~~~~~~~~~a~~~~~~~--~~~Y~~------~~-~~~Lr----~aia~~~~v~~~----~I~it~G~~~ 85 (360)
T PRK07392 23 AILDFSASINPLGPPESVIAAIQSALSA--LRHYPD------PD-YRELR----LALAQHHQLPPE----WILPGNGAAE 85 (360)
T ss_pred cEEEeCCcCCCCCCCHHHHHHHHHHHHH--hhcCCC------cC-HHHHH----HHHHHHhCcChh----hEEECCCHHH
Confidence 45888888774 678999998766543 123332 11 12343 556667788875 56679998 8
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC----CCCHHHHHHHhhhcCCcEE
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG----LVDYDMLEKTAILFRPKLI 255 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~----~iD~d~le~~i~~~~pklI 255 (529)
++..++.++. +||.|++++|.|.++. ..+...|. ++++++++.+++ ..|++++++.. . +++++
T Consensus 86 ~i~~~~~~l~-~g~~vlv~~P~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~ 152 (360)
T PRK07392 86 LLTWAGRELA-QLRAVYLITPAFGDYR--------RALRAFGA--TVKELPLPLDQPSPGLTLRLQTLPPQL-T-PNDGL 152 (360)
T ss_pred HHHHHHHHhC-CCCeEEEECCCcHHHH--------HHHHHcCC--eEEEEecccccCCcccccCHHHHHHhc-c-CCCEE
Confidence 8888888765 7899999999775542 23344565 666666654432 35677776543 2 67899
Q ss_pred EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-c-ccEEEecccccc--cCCCCeEEEe
Q 009673 256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-Y-CDVVTTTTHKSL--RGPRGGMIFF 326 (529)
Q Consensus 256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~-aDiv~~S~hK~l--~GprgG~i~~ 326 (529)
++++|+||+ ..+.++|.++++++++ +|+|+++ ..+...+..++.+ . + --+++.|++|++ +|.|.||+++
T Consensus 153 ~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y-~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~ 230 (360)
T PRK07392 153 LLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAF-MDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIA 230 (360)
T ss_pred EEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECch-hhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeC
Confidence 999999998 6788999999999985 6669984 4544333212211 1 1 127889999986 7999999999
Q ss_pred eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchH-HHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCC
Q 009673 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVEL-GYKLVSGGSDN 404 (529)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~ 404 (529)
++ ++.+++.....+ .+.+.. ...++..+++ ...+ +...+.+.++++.+.+.|++. |+.+..+ ..
T Consensus 231 ~~------~~~~~~~~~~~~--~~~s~~-~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--~~ 296 (360)
T PRK07392 231 HP------DRLQRWQQWRDP--WPVNGL-AAAAAIAALA---DRDFQQQTWAWLPPAREALFQGLASLPGLTPLPS--AA 296 (360)
T ss_pred CH------HHHHHHHhhCCC--CCCCHH-HHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCC--CC
Confidence 87 666666544322 122222 2333333443 2233 444566778888899999874 7776543 34
Q ss_pred ceEEEccCCCCCcHHHHH-HhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 405 HLVLVDLRPMGIDGARVE-KILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 405 ~~~~v~~~~~~i~~~~~~-~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+++|+++.. +..++. ++|+++||.+. ||.. +...+++|||++.. .++++++.+.+.+++.
T Consensus 297 ~fl~~~~~~---~~~~l~~~ll~~~gv~v~----pg~~f~~~~~~~iRi~~~~-------~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 297 NFLLVQSQG---SALQLQEKLLQQHRILIR----DCLSFPELGDRYFRVAVRT-------EAENQRLLEALAAILA 358 (360)
T ss_pred CEEEEEcCC---CHHHHHHHHHhhCCEEEE----eCCCCCCCCCCEEEEEeCC-------HHHHHHHHHHHHHHhh
Confidence 667777642 445555 44678999995 4443 22235789998642 4678888888877654
No 159
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.88 E-value=4.3e-21 Score=198.70 Aligned_cols=333 Identities=13% Similarity=0.074 Sum_probs=220.3
Q ss_pred ceeEecCCCCCcHHHHHHHhhhhhccCCC--CCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 009673 104 SLELIASENFTSRAVMEAVGSCLTNKYSE--GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (529)
Q Consensus 104 ~i~L~asen~~~~~V~eal~~~l~~~y~~--G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~ 181 (529)
.+.++|+...+|+.|++|+...+.+-.+. |.+. ......++.+.++ .+++.++++||.+.+ +.+.+...||+.|+
T Consensus 4 ~~l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~-~~hr~~~f~~~~~-~~~~~l~~l~~~~~~-~~v~~~~gsgt~~~ 80 (360)
T PRK05355 4 VYNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVME-ISHRSKEFEAVAE-EAEADLRELLNIPDN-YKVLFLQGGASLQF 80 (360)
T ss_pred eeeccCCCCCCCHHHHHHHHHHhhccccCCccccc-cCCCCHHHHHHHH-HHHHHHHHHhCCCCC-cEEEEEcCCchHHH
Confidence 35678899999999999998876321111 1111 1122345555555 567999999998432 22445567777999
Q ss_pred HHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHH-HhhhcCCcEEEEcCC
Q 009673 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEK-TAILFRPKLIIAGAS 260 (529)
Q Consensus 182 ~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~-~i~~~~pklIi~~~s 260 (529)
.+++..++.+||++++.... .++|.+. +.....|. . ..+..++..+..+..++++ .+++ ++++|.+.+.
T Consensus 81 Ea~~~nl~~~g~~~l~i~~G---~fg~r~~---~~a~~~g~--~-~~~~~~~~~g~~~~~~~~~~~l~~-~~~~V~~th~ 150 (360)
T PRK05355 81 AMVPMNLLGGGKKADYVDTG---SWSKKAI---KEAKKYGE--V-NVAASSEDDGFTYIPPLDEWQLSD-DAAYVHYTSN 150 (360)
T ss_pred HHHHHhcCCCCCeEEEEECC---HHHHHHH---HHHHHhCC--c-eEEecccccCCCCCCChhhccCCC-CCCEEEEccC
Confidence 99999999999999988643 3333331 12223343 1 2222332234444444444 6665 7899988865
Q ss_pred CCCC--CC-CHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHH
Q 009673 261 AYPR--DF-DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (529)
Q Consensus 261 ~~p~--~~-d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l 336 (529)
.+++ .. |+++| +|+++++|++++.|....++ +..|++++|.||+| ||.| |+++++++ +
T Consensus 151 eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv-----~~~d~~~~ssqK~l-gP~Glg~l~~s~~------~ 212 (360)
T PRK05355 151 ETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDV-----SKFGLIYAGAQKNI-GPAGLTIVIVRED------L 212 (360)
T ss_pred CCcceEecCccccc------CCCcEEEEcCccccCccCCH-----HHccEEEEeccccc-cCCceEEEEECHH------H
Confidence 5444 44 56655 89999999999988764332 23579999999998 6998 99999984 3
Q ss_pred Hhhhccc-----------ccCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcCcE-EecC-CC
Q 009673 337 ESAINNA-----------VFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGYK-LVSG-GS 402 (529)
Q Consensus 337 ~~~i~~~-----------~~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G~~-v~~~-gt 402 (529)
.+++... ......++|+.+.+.++..+|+.+... +++++.++..+.++++.+.|++.|+. .+.+ ..
T Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~ 292 (360)
T PRK05355 213 LGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPED 292 (360)
T ss_pred HhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhh
Confidence 3333221 001124799999999999999998877 78999999999999999999997752 2221 11
Q ss_pred CC-ceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 403 DN-HLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 403 ~~-~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
.+ ....+.+. .+++..++...+.+.||.+. +|.. ..+.+|+|+..+++ ++|++++.++|++++.+
T Consensus 293 rs~~v~sf~~~-~~~~~~~~~~~~~~~Gi~~~----~~~~---~~g~vRiS~~~~nt----~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 293 RSRMNVPFTLA-DEELDKKFLAEAKAAGLVGL----KGHR---SVGGMRASIYNAMP----LEGVQALVDFMKEFERR 358 (360)
T ss_pred cCCcEEEEEcC-ChHHHHHHHHHHHHCCCccc----CCCC---ccCcEEEECCCCCC----HHHHHHHHHHHHHHHHh
Confidence 12 22333332 22233456567778999972 2321 24789999876665 79999999999997753
No 160
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.88 E-value=9.7e-21 Score=196.37 Aligned_cols=314 Identities=14% Similarity=0.098 Sum_probs=195.4
Q ss_pred cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChH-
Q 009673 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS- 178 (529)
Q Consensus 103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs- 178 (529)
..++|..+++ ++++.+.+++..... ..+|+. .....++++.+.+++.+.+|.+ .+. .+|.+++|+
T Consensus 22 ~~i~l~~~~p~~~~~~~~~~~~~~~~~---~~~Y~~------~~G~~~lr~~ia~~~~~~~~~~~~~~--~~I~it~G~~ 90 (357)
T TIGR03539 22 GIVDLSVGTPVDPVPPLIRAALAAAAD---APGYPQ------TWGTPELREAIVDWLERRRGVPGLDP--TAVLPVIGTK 90 (357)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHh---hCCCCc------ccCCHHHHHHHHHHHHHhcCCCCCCc--CeEEEccChH
Confidence 4577876654 457888888865432 122332 1112355555667777776654 322 267779987
Q ss_pred HHHHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 009673 179 PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 257 (529)
Q Consensus 179 ~A~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~ 257 (529)
+++..++.++ ++|||.|++++|.|.++.. .+...|. +++.++ |++.+. ..++++|++
T Consensus 91 ~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~--------~~~~l~----~~~~~~v~~ 148 (357)
T TIGR03539 91 ELVAWLPTLLGLGPGDTVVIPELAYPTYEV--------GALLAGA--TPVAAD--------DPTELD----PVGPDLIWL 148 (357)
T ss_pred HHHHHHHHHHcCCCCCEEEECCCCcHHHHH--------HHHhcCC--EEeccC--------ChhhcC----ccCccEEEE
Confidence 8888887877 7999999999998754421 2234454 444442 223222 237899999
Q ss_pred cCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--------cccEEEecccccc--cCCCCe
Q 009673 258 GASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--------YCDVVTTTTHKSL--RGPRGG 322 (529)
Q Consensus 258 ~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--------~aDiv~~S~hK~l--~GprgG 322 (529)
++++||+ .. ++++|.++|++||+++|+|+++. .+.+.+.....+. .-.+++.|++|.+ +|+|+|
T Consensus 149 ~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G 227 (357)
T TIGR03539 149 NSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYL-ELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAG 227 (357)
T ss_pred eCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchh-hhccCCCCccceecccCCCccccEEEEeccccccCCCceeEE
Confidence 8899997 34 46778899999999999999853 3333221111111 1137889999984 899999
Q ss_pred EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC
Q 009673 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 402 (529)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt 402 (529)
|+++++ ++.+++.........+.+...+ .++..++.. ....+..++.+.++++.+.+.|.+.|+.+..+ .
T Consensus 228 ~~i~~~------~~~~~~~~~~~~~~~~~~~~~q-~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p-~ 297 (357)
T TIGR03539 228 FVAGDP------ALVAELLTVRKHAGLMVPAPVQ-AAMVAALGD--DGHVAEQKARYAARRAQLKPALEKAGFRIDHS-E 297 (357)
T ss_pred EEecCH------HHHHHHHHHHhhcccCCCHHHH-HHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCC-C
Confidence 999876 6766665432222222222222 333334421 12235566777888888999998888776544 2
Q ss_pred CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673 403 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473 (529)
Q Consensus 403 ~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i 473 (529)
.+.++|+.+. .+..++.+.|.++||.+. ||.. ++..+++|||++.. +++++++..+.|
T Consensus 298 ~~~~~~~~~~---~~~~~~~~~l~~~gV~v~----pg~~f~~~~~~~iRis~~~------~~~~i~~~~~~l 356 (357)
T TIGR03539 298 AGLYLWATRG---EDAWDTVDRLAELGILVA----PGDFYGPAGSQHVRVALTA------TDERIAAAVARL 356 (357)
T ss_pred ccEEEEEECC---CCHHHHHHHHHhCCEEEC----CccccCCCCCCeEEEEecC------CHHHHHHHHHhh
Confidence 3455666653 245677788899999995 4432 12235789999742 367777776654
No 161
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.88 E-value=3.5e-21 Score=200.08 Aligned_cols=315 Identities=19% Similarity=0.199 Sum_probs=203.9
Q ss_pred HHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCCCCE
Q 009673 116 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDR 194 (529)
Q Consensus 116 ~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~pGD~ 194 (529)
.+.++++...+.+.+.. ...+.++++| +.++++||.++ -|.++||+.|+++++.++ ++|||+
T Consensus 5 ~e~~~~v~~~l~s~~~~--------~~g~~~~~fE----~~~a~~~g~~~-----~~~~~sgt~Al~~al~~l~~~~gde 67 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLS--------TYGPYVEEFE----KEFAEYFGVKY-----AVAVSSGTSALHLALRALGLGPGDE 67 (363)
T ss_dssp HHHHHHHHHHHHHTCCS--------SSSHHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHTTGGTTSE
T ss_pred HHHHHHHHHHHHhCCcc--------CCCHHHHHHH----HHHHHHhCCCe-----EEEeCChhHHHHHHHHhcCCCcCce
Confidence 45566666666655421 1135688888 67899999876 366799999999999998 789999
Q ss_pred EEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHH
Q 009673 195 IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQI 274 (529)
Q Consensus 195 Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~i 274 (529)
|+++..++.+.. ..+...|. +++.++++++++.+|++++++++++ ++|+|++. +.++...|+++|.++
T Consensus 68 Vi~p~~t~~~~~--------~ai~~~G~--~pv~~Di~~~~~~id~~~~~~~i~~-~t~ai~~~-h~~G~~~d~~~i~~~ 135 (363)
T PF01041_consen 68 VIVPAYTFPATA--------SAILWAGA--EPVFVDIDPETLNIDPEALEKAITP-KTKAILVV-HLFGNPADMDAIRAI 135 (363)
T ss_dssp EEEESSS-THHH--------HHHHHTT---EEEEE-BETTTSSB-HHHHHHHHHT-TEEEEEEE--GGGB---HHHHHHH
T ss_pred EecCCCcchHHH--------HHHHHhcc--EEEEEeccCCcCCcCHHHHHHHhcc-CccEEEEe-cCCCCcccHHHHHHH
Confidence 999987654432 24555665 9999999999999999999999998 88988875 334446699999999
Q ss_pred HHHhCCEEEEecccccccccccccCCCCCcccEEEeccc--ccccCCCCeEEEeeCCCcchhHHHhhhcccccCCC----
Q 009673 275 ADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL---- 348 (529)
Q Consensus 275 a~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~---- 348 (529)
|+++|++||.|+||+.|....|..... ..|+.++||| |.++...||+|+++++ ++.++++.....+.
T Consensus 136 ~~~~~i~lIeD~a~a~g~~~~g~~~G~--~gd~~~fSf~~~K~i~~geGG~v~~~~~-----~~~~~~~~~~~~g~~~~~ 208 (363)
T PF01041_consen 136 ARKHGIPLIEDAAQAFGARYKGRPVGS--FGDIAIFSFHPTKIITTGEGGAVVTNDP-----ELAERARALRNHGRSRDA 208 (363)
T ss_dssp HHHTT-EEEEE-TTTTT-EETTEETTS--SSSEEEEESSTTSSS-SSS-EEEEESTH-----HHHHHHHHHTBTTEETSE
T ss_pred HHHcCCcEEEccccccCceeCCEeccC--CCCceEecCCCCCCCcCCCCeeEEecHH-----HHHHHhhhhhccCcCccc
Confidence 999999999999999997765532222 4688888887 8898889999999985 56555533221111
Q ss_pred ---------CC-CChHHHH-HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEec--CCCC---CceEEEcc
Q 009673 349 ---------QG-GPHNHTI-GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS--GGSD---NHLVLVDL 411 (529)
Q Consensus 349 ---------~g-~p~~~~i-aala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~--~gt~---~~~~~v~~ 411 (529)
.| ...++.+ ||+ ++.++ ..+++..++.+++++.+.+.|.+. ++.... ++.. .+.+.+-+
T Consensus 209 ~~~~~~~~~~g~n~rm~~~~AAi--gl~QL--~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~ 284 (363)
T PF01041_consen 209 FRRYRHELPPGYNFRMSELQAAI--GLAQL--KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRL 284 (363)
T ss_dssp CSTTEESSSS--B-B-BHHHHHH--HHHHH--HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEE
T ss_pred cccccccccCCcccccHHHHHHH--HHHHH--HHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccc
Confidence 01 0112222 222 33333 345677888888999999999884 554443 2211 12223333
Q ss_pred CCC-CCcHHHHHHhHhcCCeEEcCCC-CCCCC-CCCC----------C-------CeEEEccCCCccCCCCHHHHHHHHH
Q 009673 412 RPM-GIDGARVEKILDMASITLNKNS-VPGDK-SALV----------P-------GGIRIGSPAMTTRGFSEKEFVAIAD 471 (529)
Q Consensus 412 ~~~-~i~~~~~~~~L~~~GI~v~~~~-~Pg~~-~~~~----------~-------~~iRig~~~~tt~g~~~~d~~~la~ 471 (529)
... ..+.+.+.+.|.+.||.+...+ .|.+. +.+. + ..|.+.++ ..++++|++++++
T Consensus 285 ~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~----~~lt~edv~~I~~ 360 (363)
T PF01041_consen 285 PDEALADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIH----PRLTEEDVDYIAE 360 (363)
T ss_dssp TCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHS----TTSCHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCC----CCCCHHHHHHHhh
Confidence 321 1356889999999999998765 23321 1110 0 12444332 2578999999999
Q ss_pred HHH
Q 009673 472 FIH 474 (529)
Q Consensus 472 ~i~ 474 (529)
.|+
T Consensus 361 ~ir 363 (363)
T PF01041_consen 361 AIR 363 (363)
T ss_dssp HHH
T ss_pred ccC
Confidence 874
No 162
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.88 E-value=3.7e-20 Score=195.00 Aligned_cols=338 Identities=12% Similarity=0.036 Sum_probs=220.1
Q ss_pred CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-C-CCCceeeecCChHHHHHHHHHhhc
Q 009673 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-E-NKWGVNVQPLSGSPANFEVYTAIL 189 (529)
Q Consensus 112 n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~-~~~~~~V~~~sGs~A~~~~l~all 189 (529)
.++.|.+.+++.+.+...+ |.|.. .|. ..++|+.+++|+++++|++ + +++.. +.+++||+||+.++.+..
T Consensus 51 t~~~p~~~~~~~~~l~~~~--~np~s---~~~--~~~le~~~~~~la~llg~~~~~~~~~g-~~TsGgTEAn~~al~~ar 122 (431)
T TIGR01788 51 TWMEPEARKLMDETINKNM--IDKDE---YPQ--TAEIENRCVNMLADLWHAPAKDAEAVG-TSTIGSSEAIMLGGLAMK 122 (431)
T ss_pred CCCCHHHHHHHHHHHhcCC--CCccc---Ccc--HHHHHHHHHHHHHHHhCCCCCCCCCeE-EEechHHHHHHHHHHHHH
Confidence 4567889999988875433 34432 122 2388889999999999998 3 33322 223566699998876542
Q ss_pred --------CCC-----CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673 190 --------KPH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (529)
Q Consensus 190 --------~pG-----D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi 256 (529)
+.| -.|++.+.+|.+.. +.....|. ++..+++|++++.+|+++|++++++ +|.+|+
T Consensus 123 ~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~--------ka~~~lg~--~v~~i~~d~~~~~vd~~~L~~~i~~-~t~lV~ 191 (431)
T TIGR01788 123 WRWRKRMEAAGKPTDKPNLVMGSNVQVCWE--------KFARYFDV--ELREVPMDPGRYVIDPEQVVEAVDE-NTIGVV 191 (431)
T ss_pred HHHHHHHHhcCCCCCCcEEEEcCcchHHHH--------HHHHHcCc--eeEEEecCCCceeeCHHHHHHHHhh-CCeEEE
Confidence 112 26777776664432 22333454 5666667753468999999999987 788887
Q ss_pred EcCCC--CCCCCCHHHHHHHHHHh------CCEEEEecccccccccc--cccCCCC--CcccEEEecccccccCCCC-eE
Q 009673 257 AGASA--YPRDFDYPRMRQIADAV------GALLMMDMAHISGLVAA--SVVADPF--KYCDVVTTTTHKSLRGPRG-GM 323 (529)
Q Consensus 257 ~~~s~--~p~~~d~~~i~~ia~~~------g~~livD~ah~~Gli~~--~~~~~~~--~~aDiv~~S~hK~l~Gprg-G~ 323 (529)
+...+ .+...|+++|+++|+++ |+|+++|++|+.+..+. +..+..+ .++|.++.|.|||+.||.| |+
T Consensus 192 ~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~ 271 (431)
T TIGR01788 192 CILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVGW 271 (431)
T ss_pred EEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcEE
Confidence 77443 34489999999999999 99999999987554322 1112222 3789999999999889998 99
Q ss_pred EEeeCCCcchhHHHhhhccc--------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-C
Q 009673 324 IFFKKDPVLGVELESAINNA--------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-G 394 (529)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~--------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G 394 (529)
++++++. .+.+.+... ....+.++......++++..|......++.+..++..+++++|.+.|++. +
T Consensus 272 l~~r~~~----~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~ 347 (431)
T TIGR01788 272 VIWRDEE----ALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGP 347 (431)
T ss_pred EEEeChH----HcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9998741 122222110 00122333333344455666666666788999999999999999999884 6
Q ss_pred cEEecCCCCCceEEEccCC---CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673 395 YKLVSGGSDNHLVLVDLRP---MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 471 (529)
Q Consensus 395 ~~v~~~gt~~~~~~v~~~~---~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~ 471 (529)
++++.+....+++.+.+.+ .+++..++.+.|.+.|+.+.....|-. ..+...+|+.+... .+.+.++.+.+
T Consensus 348 ~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~--~~~~~~lR~~~~~~----~~~~~~~~~~~ 421 (431)
T TIGR01788 348 FEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKN--AEDIVVMRIVVREG----FSRDLAELLIE 421 (431)
T ss_pred EEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCc--cCCeEEEEEEecCC----CCHHHHHHHHH
Confidence 9988642223333333332 135567788999999998754433311 01123589876433 44677788888
Q ss_pred HHHHHHH
Q 009673 472 FIHEGVE 478 (529)
Q Consensus 472 ~i~~~~~ 478 (529)
.|.+++.
T Consensus 422 ~~~~~~~ 428 (431)
T TIGR01788 422 DIEAALA 428 (431)
T ss_pred HHHHHHH
Confidence 7777665
No 163
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=4.7e-21 Score=198.50 Aligned_cols=275 Identities=20% Similarity=0.189 Sum_probs=186.4
Q ss_pred HHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCC-CEEEEcCCCCCccccccccccccccccccceEEEEEcccC
Q 009673 155 KRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (529)
Q Consensus 155 ~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~ 232 (529)
+.+++++|++++ +|.+++|+ +++..++.++++|| |+|++++|.|..+. ......|. +++.++++
T Consensus 67 ~aia~~~~~~~~----~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~--------~~~~~~g~--~v~~v~~~ 132 (354)
T PRK04635 67 NAYSAYAGVAPE----QILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYA--------ISAETFNV--GVKALPLT 132 (354)
T ss_pred HHHHHHhCcCHH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH--------HHHHHcCC--EEEEEecC
Confidence 566778899885 56779998 89999999999999 99999998765321 12234455 66666665
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHh-CCEEEEecccccccccccccCCCCC-ccc-E
Q 009673 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK-YCD-V 307 (529)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~-g~~livD~ah~~Gli~~~~~~~~~~-~aD-i 307 (529)
+++.+|.+.+++ + + ++|+|++++|+||+ ..+.+++.++++.. +++||+|+++. .+........... +.. +
T Consensus 133 -~~~~~~~~~l~~-~-~-~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~-~~~~~~s~~~~~~~~~~~i 207 (354)
T PRK04635 133 -ADYQLPLDYIEQ-L-D-GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYI-EFCPEYSVADLLASYPNLV 207 (354)
T ss_pred -CCCCCCHHHHHh-c-c-CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchH-hhccCcchHHHHhhCCCEE
Confidence 357899998873 3 4 89999999999997 77889999998864 79999999954 3221110000001 111 6
Q ss_pred EEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 009673 308 VTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (529)
Q Consensus 308 v~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~ 385 (529)
++.|+||++ +|.|.||+++++ ++.+.+.....+. +.+...+.+++ .++.....+..++..+++.++++.
T Consensus 208 v~~S~SK~~~l~GlRlG~~i~~~------~~~~~l~~~~~~~--~~~~~~~~~a~-~~l~~~~~~~~~~~~~~~~~~r~~ 278 (354)
T PRK04635 208 VLRTLSKAFALAGARCGFTLANE------ELIEILMRVIAPY--PVPLPVSEIAT-QALSEAGLARMKFQVLDLNAQGAR 278 (354)
T ss_pred EEechHHHhhhhHHHHhhhhCCH------HHHHHHHhhcCCC--CCCHHHHHHHH-HHHhcccHHHHHHHHHHHHHHHHH
Confidence 889999986 688999999987 6777766543222 22222222222 233321111235556778888899
Q ss_pred HHHHHHhcC-cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHH
Q 009673 386 LASRLVELG-YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK 464 (529)
Q Consensus 386 l~~~L~~~G-~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~ 464 (529)
+.+.|++.+ +.+..++ ..++|+++. +..++.+.|+++||.+.... . ...++++||++. +++
T Consensus 279 l~~~L~~~~~~~~~~~~--g~f~~~~~~----~~~~~~~~l~~~gv~v~~~~----~-~~~~~~lRis~~-------~~e 340 (354)
T PRK04635 279 LQAALSMYGGAKVLEGN--GNYVLAKFD----DVDAVFKALWDAGIVARAYK----D-PRLANCIRFSFS-------NRA 340 (354)
T ss_pred HHHHHHhCCCceECCCC--CcEEEEECC----CHHHHHHHHHHCCEEEEECC----C-CCCCCeEEEEeC-------CHH
Confidence 999998865 7766542 346677664 35678888999999996421 1 123568999963 379
Q ss_pred HHHHHHHHHHH
Q 009673 465 EFVAIADFIHE 475 (529)
Q Consensus 465 d~~~la~~i~~ 475 (529)
|+++++++|++
T Consensus 341 ~~~~l~~al~~ 351 (354)
T PRK04635 341 ETDKLIGLIRN 351 (354)
T ss_pred HHHHHHHHHHH
Confidence 99999999865
No 164
>PRK07908 hypothetical protein; Provisional
Probab=99.88 E-value=2.5e-20 Score=192.72 Aligned_cols=314 Identities=15% Similarity=0.164 Sum_probs=206.5
Q ss_pred hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (529)
Q Consensus 102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs- 178 (529)
.+.++|..++|+ +|+.+++++...+... .+||.. .| ..++ ++.+++++|++++ +|.+++|+
T Consensus 22 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~---~g---~~~l----r~aia~~~~~~~~----~I~it~Ga~ 85 (349)
T PRK07908 22 PGLLDFAVNVRHDTPPEWLRERLAARLGDL--AAYPST---ED---ERRA----RAAVAARHGRTPD----EVLLLAGAA 85 (349)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhHh--hcCCCc---cc---hHHH----HHHHHHHhCcChh----hEEECCCHH
Confidence 367889888874 6888999998766432 234321 11 2233 3667778898875 56678888
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
+++..++. ++||+ +++..|.+.... ..+...|. +++.++++. ++.+|++.+ ++ ++++++++
T Consensus 86 ~al~~~~~--l~~~~-viv~~P~y~~~~--------~~~~~~G~--~i~~v~~~~-~~~~d~~~l----~~-~~~~i~l~ 146 (349)
T PRK07908 86 EGFALLAR--LRPRR-AAVVHPSFTEPE--------AALRAAGI--PVHRVVLDP-PFRLDPAAV----PD-DADLVVIG 146 (349)
T ss_pred HHHHHHHh--cCCCe-EEEeCCCChHHH--------HHHHHcCC--EEEeeccCc-ccCcChhHh----cc-CCCEEEEc
Confidence 88887776 57754 555677654332 12334554 777777764 378888855 33 78999999
Q ss_pred CCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCC--CCccc-EEEecccccc--cCCCCeEEEeeCCCc
Q 009673 259 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FKYCD-VVTTTTHKSL--RGPRGGMIFFKKDPV 331 (529)
Q Consensus 259 ~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~--~~~aD-iv~~S~hK~l--~GprgG~i~~~~~~~ 331 (529)
+++||+ ..+.++|.++|++ +.++|+|++|. .++. +..++. ....+ +++.|+||++ +|+|.||+++++
T Consensus 147 np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~-~~~~-~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~--- 220 (349)
T PRK07908 147 NPTNPTSVLHPAEQLLALRRP-GRILVVDEAFA-DAVP-GEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAP--- 220 (349)
T ss_pred CCCCCCCCCcCHHHHHHHHhc-CCEEEEECcch-hhcc-CCccccccccCCCEEEEeecccccCCccceeeeeecCH---
Confidence 999997 7789999999964 88999999854 2332 211111 11223 6778999975 789999999887
Q ss_pred chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEcc
Q 009673 332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 411 (529)
Q Consensus 332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~ 411 (529)
++.+.+.........+ ....+++...+.......+++.++++.++++.+.+.|++.|+++..+ ....++|+++
T Consensus 221 ---~~~~~~~~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p-~~g~~~~~~~ 293 (349)
T PRK07908 221 ---DVLARLTRGRAHWPVG---TLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVVDP-AAAPFVLVRV 293 (349)
T ss_pred ---HHHHHHHhcCCCCCcc---HHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccC-CCceEEEEEC
Confidence 6777765543222122 22333332222211112345667788888999999998888877654 2356778777
Q ss_pred CCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 412 RPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 412 ~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.. .+++.+.|+++||.+.. |+. +...+++|||++. +++|++++.+.|++++.
T Consensus 294 ~~----~~~~~~~l~~~gI~v~~----g~~f~~~~~~~vRis~~-------~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 294 PD----AELLRKRLRERGIAVRR----GDTFPGLDPDYLRLAVR-------PRAEVPVLVQALAEILK 346 (349)
T ss_pred Cc----HHHHHHHHHhCCEEEEE----CCCCCCCCCCeEEEEeC-------CCccHHHHHHHHHHHHh
Confidence 52 46788889999999954 433 1223679999973 36899999999988754
No 165
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.88 E-value=8.1e-21 Score=198.29 Aligned_cols=327 Identities=15% Similarity=0.104 Sum_probs=209.9
Q ss_pred ceeEecCCCCCcHH-HHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673 104 SLELIASENFTSRA-VMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (529)
Q Consensus 104 ~i~L~asen~~~~~-V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~ 182 (529)
.++++++...+++. |++++....... ..| +.++.+.++ .+++.++++||++.+ ..+.+...|||.++.
T Consensus 13 ~~~f~~Gp~~~~~~~v~~a~~~~~~~~------~hr---~~~f~~~~~-~~r~~l~~l~~~~~~-~~v~~~~gs~T~~~~ 81 (378)
T PRK03080 13 DPRFSSGPCKKRPGWQLEALADALLGR------SHR---QKPVKALLK-RVIEGTRELLSLPEG-YEVGIVPGSDTGAWE 81 (378)
T ss_pred CCCcCCCCcCCChHHHHHHHHhhhccc------CcC---CHHHHHHHH-HHHHHHHHHhCCCCC-ceEEEECCchHHHHH
Confidence 46677888777777 999998543210 111 235555555 678999999998532 112222347889999
Q ss_pred HHHHhhcCC-CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673 183 EVYTAILKP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (529)
Q Consensus 183 ~~l~all~p-GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (529)
+++.+++++ ++.|+. +-+|+..+. .. .....|. .++..++.+ +++.+|+++++ . +++|.+++..
T Consensus 82 ~~~~~l~~~~~~~vi~-~g~f~~~~~----~~--~~~~~g~-~~v~~~~~~-~g~~~d~~~i~----~--~~~V~~~h~~ 146 (378)
T PRK03080 82 MALWSLLGARRVDHLA-WESFGSKWA----TD--VVKQLKL-EDPRVLEAD-YGSLPDLSAVD----F--DRDVVFTWNG 146 (378)
T ss_pred HHHHhcCCCCcceEEE-eCHHHHHHH----HH--HHhhcCC-CCceEeccC-CCCCCCHhhcC----C--CCCEEEEecC
Confidence 999999875 455554 444443211 00 0012233 033333343 45678887743 2 4566666433
Q ss_pred --CCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHh
Q 009673 262 --YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (529)
Q Consensus 262 --~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~ 338 (529)
++...|+++|++ +++|+++++|++|+.|....++. .+|++++|.||||.||.| |+++++++ ..+
T Consensus 147 t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~-----~iD~~~~s~~K~l~~P~G~g~l~v~~~------~~~ 213 (378)
T PRK03080 147 TTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWS-----KLDVYTFSWQKVLGGEGGHGMAILSPR------AVE 213 (378)
T ss_pred Cccceeccchhhcc--ccCCCeEEEecccccccCCCCHH-----HCcEEEEehhhhCCCCCceEEEEECHH------HHH
Confidence 344889999999 88999999999999987754432 379999999999999998 99999983 333
Q ss_pred hhccc---------------------c-cCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcC-
Q 009673 339 AINNA---------------------V-FPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG- 394 (529)
Q Consensus 339 ~i~~~---------------------~-~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G- 394 (529)
++... . ..+..++|+...+.++..+|+.+... ++++..++..+.++++.+.|.+.+
T Consensus 214 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~ 293 (378)
T PRK03080 214 RLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPW 293 (378)
T ss_pred hhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 22210 0 11223567777888888899988776 678888999999999999998865
Q ss_pred cEEecC--CCCC-ceEEEccCCC--CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673 395 YKLVSG--GSDN-HLVLVDLRPM--GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 469 (529)
Q Consensus 395 ~~v~~~--gt~~-~~~~v~~~~~--~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~l 469 (529)
+.++.. ...+ .++.+.+... +.+.+ +...|.+.||.+..+... . ..+.+|||...+++ ++|++++
T Consensus 294 ~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~-~~~~l~~~~i~v~~g~~~----~-~~~~vRis~~~~~t----~~di~~l 363 (378)
T PRK03080 294 ATPLVADPATRSNTSVTLDFVDAQAAVDAA-AVAKLLRENGAVDIEPYR----D-APNGLRIWCGPTVE----PADVEAL 363 (378)
T ss_pred cccccCCccccCccEEEEEcCCchHHHHHH-HHHHHHHcCCeecccccc----C-CCCcEEEecCCCCC----HHHHHHH
Confidence 566532 1112 2333333320 23333 444454558877532110 1 24789999877665 8999999
Q ss_pred HHHHHHHHHH
Q 009673 470 ADFIHEGVEI 479 (529)
Q Consensus 470 a~~i~~~~~~ 479 (529)
+++|++++..
T Consensus 364 ~~al~~~~~~ 373 (378)
T PRK03080 364 TPWLDWAFER 373 (378)
T ss_pred HHHHHHHHHH
Confidence 9999987664
No 166
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.88 E-value=7e-21 Score=200.18 Aligned_cols=330 Identities=16% Similarity=0.189 Sum_probs=198.9
Q ss_pred hcceeEecCC----C-CCc--HHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceee
Q 009673 102 FKSLELIASE----N-FTS--RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNV 172 (529)
Q Consensus 102 ~~~i~L~ase----n-~~~--~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V 172 (529)
.+.|+|..+. + .+| +.+.+++...+.+....+|.. ..| ..++.+...+++.+..+. ++++ +.|
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~---~~G---~~~lR~aia~~~~~~~~~~~~~~~--i~v 97 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLP---IEG---LAAYRQAVQELLFGADSPALAAGR--VAT 97 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCC---CCC---CHHHHHHHHHHhcCCCCcccccCe--EEE
Confidence 3568887652 2 234 678888876653322112322 123 235555555666554432 3432 134
Q ss_pred ecCChH-HHHHHHHHhh--cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc-CCCCCCCCHHHHHHHhh
Q 009673 173 QPLSGS-PANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAI 248 (529)
Q Consensus 173 ~~~sGs-~A~~~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v-~~~~~~iD~d~le~~i~ 248 (529)
.+|+|+ +|+..++.++ ++|||+|++++|.|.++.. .+...|. +++++++ +++++.+|+|++++.++
T Consensus 98 ~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~--------~~~~~g~--~~v~v~~~~~~~~~~d~~~l~~~~~ 167 (396)
T PRK09257 98 VQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRA--------IFEAAGL--EVKTYPYYDAATKGLDFDAMLADLS 167 (396)
T ss_pred EecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHH--------HHHHcCC--cEEEEeccccccCccCHHHHHHHHH
Confidence 778988 8998887655 5899999999998765531 3345565 6666666 33457899999999887
Q ss_pred hcC--CcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccc-cccCCCC---C--c-ccEEEecccc
Q 009673 249 LFR--PKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAA-SVVADPF---K--Y-CDVVTTTTHK 314 (529)
Q Consensus 249 ~~~--pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~-~~~~~~~---~--~-aDiv~~S~hK 314 (529)
..+ .+++++++++||+ .. .+++|.++|++||+++|+|++ |.++.+. +....++ . + --|+++|++|
T Consensus 168 ~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~-Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK 246 (396)
T PRK09257 168 QAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIA-YQGFGDGLEEDAYGLRAFAAAGLELLVASSFSK 246 (396)
T ss_pred hCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecc-ccccccchHHHHHHHHHHHhcCCcEEEEEEcCC
Confidence 433 3455567899997 33 477888999999999999998 5555432 1101111 1 1 1277899999
Q ss_pred cc--cCCCCeEEEe--eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh-----cCchHHHHHHHHHHHHHH
Q 009673 315 SL--RGPRGGMIFF--KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA-----QSPEFKVYQNKVVSNCRA 385 (529)
Q Consensus 315 ~l--~GprgG~i~~--~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~-----~~~~~~~~~~~i~~~a~~ 385 (529)
++ +|+|.||+++ .+.. ...++..++.........+.+.. ...+++..+..- .....++.++++.++++.
T Consensus 247 ~~~~~GlRiG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~ 324 (396)
T PRK09257 247 NFGLYGERVGALSVVAEDAE-EADRVLSQLKATIRTNYSNPPAH-GAAIVATILNDPELRAEWEAELEEMRERIKAMRQL 324 (396)
T ss_pred cCccccccceeEEEEeCCHH-HHHHHHHHHHHHhhhhcCCCcHH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87 5999999984 2210 00012222322211111222222 222222223210 011234567788888999
Q ss_pred HHHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCC
Q 009673 386 LASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF 461 (529)
Q Consensus 386 l~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~ 461 (529)
+.+.|++.+ +.+..+ ..+.+.|+.+ +.+.+.+++++.||.+ +| .+ ||++.. .
T Consensus 325 l~~~L~~~~~~~~~~~~~p-~gg~~~w~~l-----~~~~~~~l~~~~~V~~----~p--------~~-ri~~~~-----~ 380 (396)
T PRK09257 325 LVEALKAKGPSRDFDFIAR-QRGMFSYSGL-----TPEQVDRLREEFGVYA----VG--------SG-RINVAG-----L 380 (396)
T ss_pred HHHHHHhcCCCCCcccccc-cceEEEecCC-----CHHHHHHHHHcCCEEE----cC--------CC-eEEEee-----C
Confidence 999998864 444333 2245666655 3466778889999988 33 12 998753 4
Q ss_pred CHHHHHHHHHHHHHH
Q 009673 462 SEKEFVAIADFIHEG 476 (529)
Q Consensus 462 ~~~d~~~la~~i~~~ 476 (529)
++++++++++.|+++
T Consensus 381 ~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 381 NESNIDYVAEAIAAV 395 (396)
T ss_pred CHHHHHHHHHHHHhh
Confidence 579999999999875
No 167
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.88 E-value=3.1e-20 Score=198.39 Aligned_cols=289 Identities=16% Similarity=0.145 Sum_probs=189.8
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcc
Q 009673 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (529)
Q Consensus 153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~ 230 (529)
.++++++++|++.+ ++.+++|+ +++.+++.++ .++||+|+++++.|+++..... ......|. +++.++
T Consensus 117 ~~~~la~l~g~~~~----~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~----~~~~~~G~--~~~~v~ 186 (447)
T PRK00451 117 YQTMICELTGMDVA----NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLK----TYLKGQGI--EVVEVP 186 (447)
T ss_pred HHHHHHHHhCCCcc----eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHH----HHHHhCCc--EEEEec
Confidence 34688999999874 45556666 7777788887 4899999999987765432110 00111343 667777
Q ss_pred cCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEE--ecccccccccccccCCCCC-ccc
Q 009673 231 LDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMM--DMAHISGLVAASVVADPFK-YCD 306 (529)
Q Consensus 231 v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~liv--D~ah~~Gli~~~~~~~~~~-~aD 306 (529)
+++ + .+|++++++.+++ ++++|+++++++.+ ..|+++|.++|+++|+++++ |.. ..|.+ ..+.. ++|
T Consensus 187 ~~~-~-~~d~~~l~~~i~~-~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~-----~~~~~~~~D 257 (447)
T PRK00451 187 YED-G-VTDLEALEAAVDD-DTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLL-----KPPGEYGAD 257 (447)
T ss_pred CCC-C-CCCHHHHHHhcCC-CeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccC-----CCcccCCCC
Confidence 764 4 8999999999987 89999988774433 77999999999999999998 533 33332 11222 689
Q ss_pred EEEeccccc-----ccCCCCeEEEeeCCCcchhHHHhhhc----------------------------ccccCCCCCCCh
Q 009673 307 VVTTTTHKS-----LRGPRGGMIFFKKDPVLGVELESAIN----------------------------NAVFPGLQGGPH 353 (529)
Q Consensus 307 iv~~S~hK~-----l~GprgG~i~~~~~~~~~~~l~~~i~----------------------------~~~~p~~~g~p~ 353 (529)
++++|.||+ ++||+.|++++++ ++.+.+. +.......+++.
T Consensus 258 ~~~~s~~k~~~~~~~~Gpg~G~l~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (447)
T PRK00451 258 IVVGEGQPLGIPLSFGGPYLGFFATRK------KLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQ 331 (447)
T ss_pred EEEECCCcCCCCCCCCCCCchHHHhhH------HHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccH
Confidence 999998886 6889889999887 3444321 000000111111
Q ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEE
Q 009673 354 NHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITL 432 (529)
Q Consensus 354 ~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v 432 (529)
.....+.+.+++.+...++++..+++.++++++.+.|++. |+++.. +...+.+.+++. .+..++.+.|.+.||.+
T Consensus 332 ~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~~~~~~v~~~---~~~~~~~~~L~~~gi~~ 407 (447)
T PRK00451 332 ALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFD-GPFFNEFVVRLP---KPAEEVNEALLEKGILG 407 (447)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecC-CCeEEEEEEecC---CCHHHHHHHHHhcCCCC
Confidence 1111222224554555567888999999999999999985 687763 211122234442 24677888888888875
Q ss_pred cCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 433 NKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 433 ~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
. +++.. .+...+.+|++++.++| ++|++++++.|++++
T Consensus 408 ~---~~~~~~~~~~~~~~rvs~~~~~t----~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 408 G---YDLGRYYPELGNHLLVCVTEKRT----KEDIDALVAALGEVL 446 (447)
T ss_pred C---cccccccCCcCCEEEEecCCCCC----HHHHHHHHHHHHHHh
Confidence 3 22221 11124689999876654 799999999998653
No 168
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.88 E-value=7.6e-20 Score=175.57 Aligned_cols=332 Identities=16% Similarity=0.120 Sum_probs=232.8
Q ss_pred eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 009673 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (529)
Q Consensus 105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~ 184 (529)
..|++++..+|.+|++||.... .|+.. .++...+ ....+-++..|....+. ..+..++|+.+..++
T Consensus 19 ~L~gPGPsnl~~~V~~A~~~~~-----lgh~s------Pe~~qIm-~~v~egikyVFkT~n~~--tf~isgsGh~g~E~a 84 (385)
T KOG2862|consen 19 TLLGPGPSNLSGRVQEAMSRPS-----LGHMS------PEFVQIM-DEVLEGIKYVFKTANAQ--TFVISGSGHSGWEAA 84 (385)
T ss_pred eeecCCCcCCCHHHHHhhcCCc-----cccCC------HHHHHHH-HHHHHHHHHHhccCCCc--eEEEecCCcchHHHH
Confidence 3678888889999999997432 33322 2333333 34557788899888654 357788999999999
Q ss_pred HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC--CC
Q 009673 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS--AY 262 (529)
Q Consensus 185 l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s--~~ 262 (529)
+..++.|||.|++... |.+++.+.. ..+..|+.+++++ .+ ......+|+|++.+..++|++|++... +.
T Consensus 85 l~N~lePgd~vLv~~~---G~wg~ra~D---~~~r~ga~V~~v~--~~-~G~~~~le~i~~~lsqh~p~~vfv~hgdsST 155 (385)
T KOG2862|consen 85 LVNLLEPGDNVLVVST---GTWGQRAAD---CARRYGAEVDVVE--AD-IGQAVPLEEITEKLSQHKPKAVFVTHGDSST 155 (385)
T ss_pred HHhhcCCCCeEEEEEe---chHHHHHHH---HHHhhCceeeEEe--cC-cccCccHHHHHHHHHhcCCceEEEEecCccc
Confidence 9999999999998864 333333211 2244566445444 43 356899999999999999999998743 34
Q ss_pred CCCCC-HHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHHh
Q 009673 263 PRDFD-YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (529)
Q Consensus 263 p~~~d-~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~ 338 (529)
+...| ++.+.++|++|++++++|...+.|.... -++ ++|+..+..+|.+.+|.| +.|..++. ..+
T Consensus 156 gV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F-----~mDewgVDvaytgSQKaL~aP~GLsiisfS~k------a~~ 224 (385)
T KOG2862|consen 156 GVLQDLLAISGELCHKHEALLLVDTVASLGGTEF-----EMDEWGVDVAYTGSQKALGAPAGLSIISFSDK------ALE 224 (385)
T ss_pred cccchHHHHHHHHhhcCCeEEEEechhhcCCccc-----eehhhcccEEEecchhhcCCCCCcceeecCHH------HHH
Confidence 44677 6677799999999999998766554321 122 799999999999999999 88888774 222
Q ss_pred hhc------------------cccc----CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcE
Q 009673 339 AIN------------------NAVF----PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK 396 (529)
Q Consensus 339 ~i~------------------~~~~----p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~ 396 (529)
+++ .... ..+..+|....+.++-+||..+..+++++..++.+++++.+...|++.|+.
T Consensus 225 ~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq 304 (385)
T KOG2862|consen 225 AIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQ 304 (385)
T ss_pred HHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 221 1111 112346788889999999999888889999999999999999999999988
Q ss_pred EecCCC--CCce-EEEccCCCCCcHHHHHHhHhc-CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673 397 LVSGGS--DNHL-VLVDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 472 (529)
Q Consensus 397 v~~~gt--~~~~-~~v~~~~~~i~~~~~~~~L~~-~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~ 472 (529)
...... .... -.+.+ +.++|..++...+.. .++.+..+ .++..+..+|||+...+ -+-+-|+.+.+.
T Consensus 305 ~fv~~e~~rlptvttv~v-p~gvDw~dVv~~~~~~~~vei~gg-----lg~~~gKv~RIGl~gcn---a~~e~i~~v~~l 375 (385)
T KOG2862|consen 305 LFVVDEELRLPTVTTVKV-PYGVDWKDVVAYAMSHYVVEIGGG-----LGPTVGKVFRIGLLGCN---ANVEYIDNVVEL 375 (385)
T ss_pred ceecChhhccCcceeeec-CCCCCHHHHHHHHHHhcCEEeccc-----cCCCcccEEEEEEeecc---CCcHHHHHHHHH
Confidence 765211 1111 12223 568899887666655 57776432 23456788999976554 345788888888
Q ss_pred HHHHHHH
Q 009673 473 IHEGVEI 479 (529)
Q Consensus 473 i~~~~~~ 479 (529)
|+.++..
T Consensus 376 l~~alq~ 382 (385)
T KOG2862|consen 376 LKLALQR 382 (385)
T ss_pred HHHHHhh
Confidence 8777653
No 169
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.87 E-value=8.2e-21 Score=197.06 Aligned_cols=330 Identities=20% Similarity=0.222 Sum_probs=207.8
Q ss_pred ceeEecCCCC------CcHHHHHHHhh-hhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC
Q 009673 104 SLELIASENF------TSRAVMEAVGS-CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS 176 (529)
Q Consensus 104 ~i~L~asen~------~~~~V~eal~~-~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s 176 (529)
.|+|..+++. .++++++++.. .....-..+|+. .....++++...+++.+..|.+.+.. .+|.+++
T Consensus 3 ~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~-~~i~~~~ 75 (363)
T PF00155_consen 3 VINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPP------PQGYPELREAIADFLGRRYGVPVDPE-ANILVTS 75 (363)
T ss_dssp EEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTC------TTHHHHHHHHHHHHHHHHHTHHTTGG-EGEEEES
T ss_pred EEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCC------chhhHHHHHHHHHHhhhccCcccccc-eEEEEec
Confidence 4666655542 34566666654 222222223332 22345666555555554444443321 2677899
Q ss_pred hH-HHHHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-CCCCCCCHHHHHHHhhhc---
Q 009673 177 GS-PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILF--- 250 (529)
Q Consensus 177 Gs-~A~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-~~~~~iD~d~le~~i~~~--- 250 (529)
|+ +++..++..+ .++||+|++++|.|.++. ..+...|. ++++++++ .+++.+|+++|++.+++.
T Consensus 76 G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~--------~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 145 (363)
T PF00155_consen 76 GAQAALFLLLRLLKINPGDTVLVPDPCYPSYI--------EAARLLGA--EVIPVPLDSENDFHLDPEALEEALDELPSK 145 (363)
T ss_dssp HHHHHHHHHHHHHHSSTTSEEEEEESSSTHHH--------HHHHHTTS--EEEEEEEEETTTTEETHHHHHHHHHTSHTT
T ss_pred ccccchhhhhhcccccccccceecCCcccccc--------ccccccCc--eeeecccccccccccccccccccccccccc
Confidence 99 5566666677 789999999999876543 13344565 56666654 246899999999999874
Q ss_pred --CCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccC----CCCC-ccc-EEEecccccc-
Q 009673 251 --RPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVA----DPFK-YCD-VVTTTTHKSL- 316 (529)
Q Consensus 251 --~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~----~~~~-~aD-iv~~S~hK~l- 316 (529)
++++|+++.++||+ ..+ +++|.++|+++|+++|+|++|. ++...+... ..+. +.+ +++.|++|++
T Consensus 146 ~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g 224 (363)
T PF00155_consen 146 GPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYS-DLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFG 224 (363)
T ss_dssp TETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTT-TGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTT
T ss_pred ccccceeeecccccccccccccccccchhhhhcccccceeeeecee-ccccCCCccCcccccccccccceeeeecccccc
Confidence 46789999999987 444 4555556999999999999954 444332110 1111 233 8889999986
Q ss_pred -cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHHhc
Q 009673 317 -RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS--PEFKVYQNKVVSNCRALASRLVEL 393 (529)
Q Consensus 317 -~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~--~~~~~~~~~i~~~a~~l~~~L~~~ 393 (529)
+|.|.||+++++ ++.+.+.....++.. +.. ...+++..+..... ...++.++++.++++.+.+.|++.
T Consensus 225 ~~GlRvG~i~~~~------~~~~~l~~~~~~~~~--~~~-~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 295 (363)
T PF00155_consen 225 LPGLRVGYIVAPP------ELIERLRRFQRSGLS--SSP-MQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI 295 (363)
T ss_dssp SGGGTEEEEEEEH------HHHHHHHHHHHHTTS--SHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccccchh------hhhhhhhhccccccc--cch-hhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh
Confidence 678889999977 677777654433322 222 22222223332211 145778889999999999999988
Q ss_pred CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhc-CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673 394 GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 472 (529)
Q Consensus 394 G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~-~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~ 472 (529)
|+.+..+. .+++.|+.+... +..++.+.|.+ .||.+.++..++ . +++|||++ +. .++++++++++.
T Consensus 296 ~~~~~~~~-~~~~~~~~~~~~--~~~~l~~~L~~~~gi~v~pg~~~~----~-~~~iRi~~-a~----~~~e~~~~~~~~ 362 (363)
T PF00155_consen 296 GITVLPPE-AGFFLWVRLDPN--DAEELAQELLEEYGILVRPGSYFG----V-PGYIRISL-AS----HSEEDLEEALER 362 (363)
T ss_dssp TSEEEHHS-BSSEEEEEESHH--HHHHHHHHHHHHHTEEEEEGGGGT----S-TTEEEEEG-GC----SCHHHHHHHHHH
T ss_pred hhheeecc-CccEEEEEcccc--hHHHHHHHHHHhCCEEEEecCCCC----C-CCEEEEEe-cc----CCHHHHHHHHhh
Confidence 99988653 345666665422 34556555555 599995443332 2 78999997 22 458999999887
Q ss_pred H
Q 009673 473 I 473 (529)
Q Consensus 473 i 473 (529)
|
T Consensus 363 l 363 (363)
T PF00155_consen 363 L 363 (363)
T ss_dssp H
T ss_pred C
Confidence 5
No 170
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.87 E-value=5.4e-20 Score=188.93 Aligned_cols=299 Identities=19% Similarity=0.180 Sum_probs=196.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCceeeecC-ChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 144 ~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~-sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
...+++++..++++...++..... .++.++ +|++++..++.++.++||+|+++++.|.++.. .+...|.
T Consensus 36 ~~~~~l~~~l~~~l~~~~~~~~~~--~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~--------~~~~~~~ 105 (350)
T cd00609 36 PGLPELREAIAEWLGRRGGVDVPP--EEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEA--------AARLAGA 105 (350)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCc--ceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHCCC
Confidence 345677766667777766642211 133334 45599999999999999999999987765531 2333443
Q ss_pred eEEEEEcccCCCCCCCCH--HHHHHHhhhcCCcEEEEcCCCCCC--CCCHH---HHHHHHHHhCCEEEEecccccccccc
Q 009673 223 YFESMPYRLDESTGLVDY--DMLEKTAILFRPKLIIAGASAYPR--DFDYP---RMRQIADAVGALLMMDMAHISGLVAA 295 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~--d~le~~i~~~~pklIi~~~s~~p~--~~d~~---~i~~ia~~~g~~livD~ah~~Gli~~ 295 (529)
+++.++++. ++..+. +.++..+.+ ++++|++..++|++ ..|.+ +|.++|+++|+++++|++|..+.. .
T Consensus 106 --~~~~i~~~~-~~~~~~~~~~~~~~~~~-~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~-~ 180 (350)
T cd00609 106 --EVVPVPLDE-EGGFLLDLELLEAAKTP-KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVY-D 180 (350)
T ss_pred --EEEEEeccc-ccCCccCHHHHHhhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhcee-C
Confidence 566666653 334443 666666655 89999988777765 55544 555899999999999999765432 2
Q ss_pred cccC----CCCC-cccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc
Q 009673 296 SVVA----DPFK-YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ 368 (529)
Q Consensus 296 ~~~~----~~~~-~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~ 368 (529)
+... ..-. +.|++++|+||++ .|++.|+++++++ ++.+.+..... ...++++.....++..+++...
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~ 254 (350)
T cd00609 181 GEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE-----ELLERLKKLLP-YTTSGPSTLSQAAAAAALDDGE 254 (350)
T ss_pred CcccccccCcCccCcEEEEeecccccCCcccceEEEecCHH-----HHHHHHHHHHH-hcccCCChHHHHHHHHHHhCcH
Confidence 2211 1111 5789999999998 4667799999874 46665554322 2234555666666666666432
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCe
Q 009673 369 SPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGG 448 (529)
Q Consensus 369 ~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~ 448 (529)
.+++...+++.++++++.+.|.+.+...+.......++++.+.. ..+.+.+.++|.++||.+.....+. +..+.+
T Consensus 255 -~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~gi~i~~~~~~~---~~~~~~ 329 (350)
T cd00609 255 -EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPE-GDDEEFLERLLLEAGVVVRPGSAFG---EGGEGF 329 (350)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCC-CChHHHHHHHHHhCCEEEecccccc---cCCCCe
Confidence 45678888899999999999998665432221234556666543 2345678889999999996532221 124678
Q ss_pred EEEccCCCccCCCCHHHHHHHHHHHH
Q 009673 449 IRIGSPAMTTRGFSEKEFVAIADFIH 474 (529)
Q Consensus 449 iRig~~~~tt~g~~~~d~~~la~~i~ 474 (529)
+||+.... ++|+++++++|+
T Consensus 330 iRi~~~~~------~~~i~~~~~al~ 349 (350)
T cd00609 330 VRLSFATP------EEELEEALERLA 349 (350)
T ss_pred EEEEeeCC------HHHHHHHHHHhh
Confidence 99997532 799999998875
No 171
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.87 E-value=2e-20 Score=193.82 Aligned_cols=317 Identities=19% Similarity=0.213 Sum_probs=212.9
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccc
Q 009673 135 PGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPK 214 (529)
Q Consensus 135 p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~ 214 (529)
.|...|+|.+...++| +.+++++|.++ -|.++||+.|+..+....++|||+| +++.|-. +..
T Consensus 62 ~GDe~yag~~s~~~lE----~~va~~~G~~~-----av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~-------Tt~ 123 (450)
T TIGR02618 62 MGDEAYAGSRNFYHLE----RTVRELYGFKY-----VVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFT-------TTR 123 (450)
T ss_pred hcchhhcCCCcHHHHH----HHHHHHHCCCe-----EEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHH-------HHH
Confidence 3444577778888898 67788999986 3567899999776666679999988 4443311 111
Q ss_pred cccccccceEEEEEcccC---------CCCCCCCHHHHHHHhhhcC---CcEEEEcCCCC---CCC---CCHHHHHHHHH
Q 009673 215 RRVSGTSIYFESMPYRLD---------ESTGLVDYDMLEKTAILFR---PKLIIAGASAY---PRD---FDYPRMRQIAD 276 (529)
Q Consensus 215 ~~i~~~g~~~~~v~~~v~---------~~~~~iD~d~le~~i~~~~---pklIi~~~s~~---p~~---~d~~~i~~ia~ 276 (529)
..+...|. .++.++.+ +.++.+|+++|++.|++.. +++|.+..++| +.. .+++++.++|+
T Consensus 124 ahIe~~Ga--v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~ 201 (450)
T TIGR02618 124 YHQEKNGA--TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCE 201 (450)
T ss_pred HHHHhCCe--EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHH
Confidence 11344554 33333222 3568999999999998632 23444443332 223 46899999999
Q ss_pred HhCCEEEEeccccccccc------ccccCCC--------CCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcc
Q 009673 277 AVGALLMMDMAHISGLVA------ASVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINN 342 (529)
Q Consensus 277 ~~g~~livD~ah~~Gli~------~~~~~~~--------~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~ 342 (529)
+||++|+.|+||.+|--+ .+....+ +.++|.+++|++|...+|-||+|+.+++ ++.++++.
T Consensus 202 ~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d~-----~l~~k~r~ 276 (450)
T TIGR02618 202 AHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDD-----EMFQSAKE 276 (450)
T ss_pred HcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCCH-----HHHHHHHH
Confidence 999999999999885311 1222222 2379999999999999999999998875 78777765
Q ss_pred c--ccCCC--CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC--CC
Q 009673 343 A--VFPGL--QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM--GI 416 (529)
Q Consensus 343 ~--~~p~~--~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~--~i 416 (529)
. .+.|+ .|+-....+.|++.+|++... ..|..+...++++|.+.|.+.|++++.+ ..+|.+++|.... .+
T Consensus 277 ~~~~~eG~~tyGgla~r~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L~~~Gvpv~~p-~ggh~V~vda~~~lph~ 352 (450)
T TIGR02618 277 LVVVFEGMPSYGGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAAGVPIVEP-VGGHAVFLDARRFLPHI 352 (450)
T ss_pred HhhhcCCccccCchhhhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHCCCcccCC-CCcceEEEEhHHhCCCC
Confidence 4 33332 344344567888888887653 3677888888999999999999999764 4568898886431 12
Q ss_pred -----cHHHH-HHhHhcCCeEEc-CCCC-----CCCCCCCCC--CeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHH
Q 009673 417 -----DGARV-EKILDMASITLN-KNSV-----PGDKSALVP--GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE 482 (529)
Q Consensus 417 -----~~~~~-~~~L~~~GI~v~-~~~~-----Pg~~~~~~~--~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~ 482 (529)
.++.+ ..+..+.||... .+++ |-......+ .-+|+.+|- |-+|.+.|+++++.+..+.++...
T Consensus 353 ~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaipr---r~yt~~h~~~v~~~~~~~~~~~~~ 429 (450)
T TIGR02618 353 PQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPR---RVYTYAHMDVVADGIIKLYKHRDD 429 (450)
T ss_pred ChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeecccc---ccccHhHHHHHHHHHHHHHhhHhh
Confidence 23333 344467787632 2221 111111111 469998764 558899999999999999887644
Q ss_pred H
Q 009673 483 A 483 (529)
Q Consensus 483 ~ 483 (529)
+
T Consensus 430 ~ 430 (450)
T TIGR02618 430 I 430 (450)
T ss_pred c
Confidence 4
No 172
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.87 E-value=4.1e-20 Score=192.57 Aligned_cols=319 Identities=18% Similarity=0.159 Sum_probs=200.1
Q ss_pred ecCCCCC----cHHHHHHHhhhhhccC-------CCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecC
Q 009673 108 IASENFT----SRAVMEAVGSCLTNKY-------SEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPL 175 (529)
Q Consensus 108 ~asen~~----~~~V~eal~~~l~~~y-------~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~ 175 (529)
.+|.+|+ ++.+.+++...+.. | ..|..|+|...|. +.++++| +.+++++|.+. + +..+
T Consensus 9 ~~s~~YL~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~gs~~~~g~~~~~~~~e----~~la~~~~~~~----~-l~~~ 78 (370)
T PRK05937 9 FVTNDFLGFSRSDTLVHEVEKRYRL-YCRQFPHAQLGYGGSRAILGPSSLLDDLE----HKIAHFHGAPE----A-FIVP 78 (370)
T ss_pred eECCCccCCCCCHHHHHHHHHHHHH-hccccCCCCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCe----E-EEEC
Confidence 3466654 56666666554432 3 2345566655543 3455555 78899999965 2 5579
Q ss_pred ChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----
Q 009673 176 SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF----- 250 (529)
Q Consensus 176 sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~----- 250 (529)
||+.||..++..+.++||.|+.....|++.+.. +..... ..+.++ .+|+++++++++..
T Consensus 79 sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~--------~~~~~~--~~~~~~------~~d~~~l~~~l~~~~~~~~ 142 (370)
T PRK05937 79 SGYMANLGLCAHLSSVTDYVLWDEQVHISVVYS--------LSVISG--WHQSFR------HNDLDHLESLLESCRQRSF 142 (370)
T ss_pred ChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHH--------HHHcCC--ceEEec------CCCHHHHHHHHHhhhccCC
Confidence 999999877777778899998877777655421 111111 122332 46899999988742
Q ss_pred CCcEEEEcCCCCC--CCCCHHHHHHHHHHhCCEEEEeccccccccccccc----CCCCCcccEEEecccccccCCCCeEE
Q 009673 251 RPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV----ADPFKYCDVVTTTTHKSLRGPRGGMI 324 (529)
Q Consensus 251 ~pklIi~~~s~~p--~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~----~~~~~~aDiv~~S~hK~l~GprgG~i 324 (529)
++.+|++++.+++ ...|+++|.++|+++|+++++|++|+.|.+..+.. ...+...++++.|++|.+ |+.|+.+
T Consensus 143 ~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G~~v 221 (370)
T PRK05937 143 GRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMGAAL 221 (370)
T ss_pred CcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCceEE
Confidence 2345556655443 38899999999999999999999999887644321 111112346778999987 6788666
Q ss_pred EeeCCCcchhHHHhhhcccccCC-CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCC
Q 009673 325 FFKKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 403 (529)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~ 403 (529)
++.+ ++...+.....|. ..++.+...++++..+++.+...+ ....+++.++++++.+.|...+ .+
T Consensus 222 l~~~------~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~-----~~-- 287 (370)
T PRK05937 222 LSSS------EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSAA-----PG-- 287 (370)
T ss_pred EcCH------HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCCC-----CC--
Confidence 6655 4433332111121 123345556777777887664333 4455666677777766664321 11
Q ss_pred CceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 404 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 404 ~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
....+.+. +.+.+.+.+.|++.||.+.....| ..+.||++++..+| ++|++++++.|.++++..
T Consensus 288 -~~~~i~~~--~~~~~~~~~~L~~~gi~v~~~~~~------~~~~iRis~~~~~t----~edid~l~~~L~~~~~~~ 351 (370)
T PRK05937 288 -CVQPIFLP--GISEQELYSKLVETGIRVGVVCFP------TGPFLRVNLHAFNT----EDEVDILVSVLATYLEKY 351 (370)
T ss_pred -CEEEEEeC--ChhHHHHHHHHHHCCeeEEeeCCC------CCCEEEEEcCCCCC----HHHHHHHHHHHHHHHHHh
Confidence 11112232 234567888899999998643222 23579999887665 899999999999987643
No 173
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=2.4e-20 Score=193.94 Aligned_cols=284 Identities=15% Similarity=0.101 Sum_probs=188.5
Q ss_pred HHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCC-CEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673 154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (529)
Q Consensus 154 ~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v 231 (529)
++.+++++|++++ +|.+++|+ +++..++.++++|| |+|++.+|.++.+. ......|. +++++++
T Consensus 65 r~~ia~~~~~~~~----~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~--------~~~~~~g~--~~~~v~~ 130 (364)
T PRK04781 65 RSALAALYGCAPE----QLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYA--------VCARLQNA--PLVEVPL 130 (364)
T ss_pred HHHHHHHhCcChH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH--------HHHHHcCC--EEEEEec
Confidence 3667778898874 56778987 89999999999999 79999888654221 11233454 6666666
Q ss_pred CC--CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCCC-c
Q 009673 232 DE--STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-Y 304 (529)
Q Consensus 232 ~~--~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~~-~ 304 (529)
+. +++.+|++++++.+...++++|++++|+||+ ..+.+++.++++. ++++||+|+++. .+.........+. +
T Consensus 131 ~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~-~f~~~~~~~~~~~~~ 209 (364)
T PRK04781 131 VDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYG-EFSDVPSAVGLLARY 209 (364)
T ss_pred CCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcch-hhcCCcchHHHHhhC
Confidence 32 2356899998665544489999999999997 6788888877764 479999999843 4332110000011 1
Q ss_pred c-cEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 009673 305 C-DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381 (529)
Q Consensus 305 a-Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~ 381 (529)
. -+++.|++|++ +|+|.||+++++ ++.+.+.+...+. +.....+.++. .++.........+..+++.+
T Consensus 210 ~~vi~~~SfSK~~gl~GlRvGy~v~~~------~l~~~l~~~~~~~--~~~~~~~~~a~-~~l~~~~~~~~~~~~~~~~~ 280 (364)
T PRK04781 210 DNLAVLRTLSKAHALAAARIGSLIANA------ELIAVLRRCQAPY--PVPTPCAALAE-QALSAPALAVTARRVAEVRA 280 (364)
T ss_pred CCEEEEecChhhcccccceeeeeeCCH------HHHHHHHhccCCC--CCCHHHHHHHH-HHHhcccHHHHHHHHHHHHH
Confidence 1 27889999986 799999999987 7888777654433 22222233332 23432100123556667888
Q ss_pred HHHHHHHHHHhc-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCC
Q 009673 382 NCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG 460 (529)
Q Consensus 382 ~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g 460 (529)
+++.+.+.|++. |+..+.+ +...++|+++. +.+++.+.|.++||.|.. |+..+..++++||++.
T Consensus 281 ~r~~l~~~L~~~~~~~~~~p-~~g~f~~~~~~----~~~~~~~~l~~~gI~v~~----~~~~~~~~~~~Ris~~------ 345 (364)
T PRK04781 281 ERERLHAALAQLPGVRRVYP-SQGNFLLVRFD----DAEAAFQALLAAGVVVRD----QRAAPRLSDALRITLG------ 345 (364)
T ss_pred HHHHHHHHHHhCCCCCeECC-CCCcEEEEEcC----CHHHHHHHHHHCCeEEee----CCCCCCCCCeEEEeCC------
Confidence 899999999885 6642333 23456777764 356788889999999954 3321123578999864
Q ss_pred CCHHHHHHHHHHHHHHH
Q 009673 461 FSEKEFVAIADFIHEGV 477 (529)
Q Consensus 461 ~~~~d~~~la~~i~~~~ 477 (529)
++++++++.+.|+++.
T Consensus 346 -~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 346 -TPEQNDRVLAALQRTQ 361 (364)
T ss_pred -CHHHHHHHHHHHHHHH
Confidence 3799999999997643
No 174
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.87 E-value=2.8e-20 Score=198.40 Aligned_cols=303 Identities=17% Similarity=0.159 Sum_probs=204.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceE
Q 009673 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF 224 (529)
Q Consensus 146 ~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~ 224 (529)
...+.+...+++....|+..+. .+|.+|+|+ +|+.++...+++|||+|++-+|+|.+.+. .....|.
T Consensus 134 ~~~LR~~ia~~l~~~~g~~~~~--~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~--------~~~~~g~-- 201 (459)
T COG1167 134 LPELREAIAAYLLARRGISCEP--EQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQ--------ALEALGA-- 201 (459)
T ss_pred cHHHHHHHHHHHHHhcCCccCc--CeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHH--------HHHHcCC--
Confidence 3455555667777677777542 368889999 99999999999999999999998765532 3344554
Q ss_pred EEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCCC--CCC---HHHHHHHHHHhCCEEEEeccccccccccccc
Q 009673 225 ESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (529)
Q Consensus 225 ~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~-~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~ 298 (529)
+++++++| ...+|+|+|++.+...++|++++. ...||+ ..+ -++|.++|++||+++|.|.. +..+.+.+..
T Consensus 202 ~~~~vp~d--~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~-y~el~~~~~p 278 (459)
T COG1167 202 RVIPVPVD--EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDY-YGELRYDGPP 278 (459)
T ss_pred cEEecCCC--CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCc-chhhhcCCCC
Confidence 77777776 357999999999988889999987 446886 344 45799999999999999987 4444444332
Q ss_pred CCCCC-----cccEEEecccccc-cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHH-hcCch
Q 009673 299 ADPFK-----YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH-AQSPE 371 (529)
Q Consensus 299 ~~~~~-----~aDiv~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~-~~~~~ 371 (529)
+.++. +--|.++||||++ +|.|.||+++++ ++.+++.........+++...+ .+++.-+.. .....
T Consensus 279 ~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~------~~~~~~~~~k~~~~~~~s~~~Q-~~la~~l~~G~~~~h 351 (459)
T COG1167 279 PPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPP------ELIEKLLRLKQAADLGPSSLSQ-AALAAFLLSGHYDRH 351 (459)
T ss_pred CCChHhhCCCCCEEEEeeehhhcccccceeeeeCCH------HHHHHHHHHHHHhcCCCChHHH-HHHHHHHHcCCHHHH
Confidence 32332 2238899999997 899999999998 6666654332222233333322 222221221 00112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC---cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC---CCCC
Q 009673 372 FKVYQNKVVSNCRALASRLVELG---YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---SALV 445 (529)
Q Consensus 372 ~~~~~~~i~~~a~~l~~~L~~~G---~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~---~~~~ 445 (529)
....++.+.++++.+.+.|.+.+ +.+..+ ....++|+.+. .+++...+...+.+.||.+... |.. .+..
T Consensus 352 l~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p-~gG~flwl~l~-~~~~~~~l~~~a~~~gv~i~~~---g~~f~~~~~~ 426 (459)
T COG1167 352 LRRLRREYARRRDALLEALAEYLPELATWTRP-EGGLFLWLELP-EGIDARELLAAALEKGVVVTPL---GSAFSADGDP 426 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCeeeecC-CceEEEEEEcC-CCCCHHHHHHHHHHCCCEEEcC---CccccCCCCC
Confidence 25566667778888888888842 233323 23456777774 5678888888888889988541 332 1113
Q ss_pred CCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 446 PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 446 ~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
.+++|+|+... +++++++..+.|.+++...
T Consensus 427 ~~~~Rl~~s~~-----~~e~i~~gi~~l~~~~~~~ 456 (459)
T COG1167 427 RNGLRLSFSSP-----SEEEIEEGIKRLAALLREA 456 (459)
T ss_pred CCeEEEEcCCC-----CHHHHHHHHHHHHHHHHHH
Confidence 45899998653 4789999888888887653
No 175
>PLN02397 aspartate transaminase
Probab=99.87 E-value=2.3e-20 Score=197.71 Aligned_cols=292 Identities=20% Similarity=0.240 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHHHHHcCCC--CCCCc-eeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673 146 IDELETLCQKRALAAFNLD--ENKWG-VNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 146 ~d~lE~~a~~~la~~~g~~--~~~~~-~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
..++.+...+++.+..+.. .+.+. ++|..++|+.++...+.+++.|||+|++++|.|.++.. .+...|.
T Consensus 93 ~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~--------~~~~~g~ 164 (423)
T PLN02397 93 LAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHN--------IFRDAGV 164 (423)
T ss_pred CHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHH--------HHHHcCC
Confidence 3456555556554433221 11110 12334455555666666777899999999998866532 3345565
Q ss_pred eEEEEEccc-CCCCCCCCHHHHHHHhhh--cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccc
Q 009673 223 YFESMPYRL-DESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVA 294 (529)
Q Consensus 223 ~~~~v~~~v-~~~~~~iD~d~le~~i~~--~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~ 294 (529)
+++++++ +++++.+|++.+++.+.. .+++++++++|+||+ .. .+++|.++|++||++||+|++ |.++.+
T Consensus 165 --~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~-Y~~l~~ 241 (423)
T PLN02397 165 --PVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSA-YQGFAS 241 (423)
T ss_pred --eEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecc-cCCccC
Confidence 6667666 334578999999888763 256788888899997 33 577888999999999999998 666665
Q ss_pred ccc---cCC--CCC--cc-cEEEecccccc--cCCCCeEEE--eeCCCcchhHHHh----hhcccccCCCCCCChHHHHH
Q 009673 295 ASV---VAD--PFK--YC-DVVTTTTHKSL--RGPRGGMIF--FKKDPVLGVELES----AINNAVFPGLQGGPHNHTIG 358 (529)
Q Consensus 295 ~~~---~~~--~~~--~a-Div~~S~hK~l--~GprgG~i~--~~~~~~~~~~l~~----~i~~~~~p~~~g~p~~~~ia 358 (529)
.+. ... .+. +. -|+++|++|++ +|+|.||++ ..+. ++.+ .+.........+.+...+ .
T Consensus 242 ~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~q-~ 315 (423)
T PLN02397 242 GDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSA-----DVAVRVKSQLKLIARPMYSNPPIHGA-S 315 (423)
T ss_pred CchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCH-----HHHHHHHHHHHHHHhcccCCCcHHHH-H
Confidence 331 111 111 11 27789999986 699999985 3221 3322 332221111222222222 2
Q ss_pred HHHHHHHHh--cC---chHHHHHHHHHHHHHHHHHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCC
Q 009673 359 GLAVCLKHA--QS---PEFKVYQNKVVSNCRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAS 429 (529)
Q Consensus 359 ala~al~~~--~~---~~~~~~~~~i~~~a~~l~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~G 429 (529)
+.+.+|..- .. ..+++..+++.++++.+.+.|++.| +.++.+ ..+++.|+++. .+.+.++|+++|
T Consensus 316 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p-~gg~fl~~~l~-----~~~~~~Ll~~~~ 389 (423)
T PLN02397 316 IVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITK-QIGMFSFTGLN-----KEQVDRMTKEYH 389 (423)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccC-CceEEEecCCC-----HHHHHHHHHhCC
Confidence 222233210 00 1135667788999999999999876 665433 23566777663 456777789999
Q ss_pred eEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 430 ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 430 I~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
|.+. +++ ||++.. .++++++++++.|++++.
T Consensus 390 V~v~------------~~~-Ri~~~~-----~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 390 IYMT------------RDG-RISMAG-----LSSKNVPYLADAIHAVVT 420 (423)
T ss_pred EEEC------------CCC-eEEEee-----CCHHHHHHHHHHHHHHHh
Confidence 9983 123 988643 557999999999999875
No 176
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.87 E-value=1.3e-19 Score=190.84 Aligned_cols=332 Identities=15% Similarity=0.147 Sum_probs=197.8
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.++|..+++. +++.|.+++...+.+.... .....|+.......+.+.+.+++.+ .+++++ +|.+++|+ +
T Consensus 34 ~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~Y~p~~g~~~lr~aia~~~~~-~~~~~d----~I~it~Ga~~ 106 (402)
T TIGR03542 34 DIIRLGIGDTTQPLPASVIEAFHNAVDELASE--ETFRGYGPEQGYPFLREAIAENDYR-GRIDPE----EIFISDGAKC 106 (402)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhccccc--ccccCCCCCCCCHHHHHHHHHHHHh-cCCCHH----HEEECCCcHH
Confidence 56888877764 6788999988776542110 0001121111223444333333221 156664 56779998 7
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc---------eEEEEEcccCCC-CCCCCHHHHHHHhhh
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI---------YFESMPYRLDES-TGLVDYDMLEKTAIL 249 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~---------~~~~v~~~v~~~-~~~iD~d~le~~i~~ 249 (529)
++.. +..++.|||+|++++|.|.++.. .....|. +.++++++.+++ ++.+|++. .
T Consensus 107 al~~-l~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~ 171 (402)
T TIGR03542 107 DVFR-LQSLFGSDNTVAVQDPVYPAYVD--------SNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------E 171 (402)
T ss_pred HHHH-HHHhcCCCCEEEEeCCCCcchHH--------HHHHcCCccccccccccceEEEeecchhhCCCCCccc------c
Confidence 7765 46677899999999998765431 1222332 115556666533 34555422 1
Q ss_pred cCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---Cc---ccEEEecccccc--
Q 009673 250 FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY---CDVVTTTTHKSL-- 316 (529)
Q Consensus 250 ~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~~---aDiv~~S~hK~l-- 316 (529)
.++++|++++|+||+ ..+ +++|.++|+++|++||+|+++ ..+...+..+.++ +. .-+++.|++|.+
T Consensus 172 ~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y-~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~ 250 (402)
T TIGR03542 172 PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAY-SAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGF 250 (402)
T ss_pred CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchh-hhhccCCCCCcchhhCCCCcccEEEEecCccccCC
Confidence 278999999999997 444 788899999999999999984 4444333222222 21 126689999976
Q ss_pred cCCCCeEEEeeCCCcchhHHH--------hhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Q 009673 317 RGPRGGMIFFKKDPVLGVELE--------SAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALAS 388 (529)
Q Consensus 317 ~GprgG~i~~~~~~~~~~~l~--------~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~ 388 (529)
+|.|.||+++++ ++. +.+.........+.+...+.++ ..++..-....+.+..+.+.++++.+.+
T Consensus 251 pGlRiG~~i~~~------~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 323 (402)
T TIGR03542 251 TGVRLGWTVVPK------ELTYADGHSVIQDWERRQCTKFNGASYPVQRAA-EAAYAGEGLQPILEAISYYMENARILRK 323 (402)
T ss_pred CCcceEEEEecH------HHhhcchhhHHHHHHHHhhhcccCCCHHHHHHH-HHHHcCcchhHHHHHHHHHHHHHHHHHH
Confidence 789999999987 443 2221111111112222333332 2233211111234556677888888999
Q ss_pred HHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHH
Q 009673 389 RLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEF 466 (529)
Q Consensus 389 ~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~ 466 (529)
.|++.|+.+..+ ....++|+.+.. .++..++.+. +++.||.+. ||+. +....+++||+.. .+++++
T Consensus 324 ~L~~~~~~~~~~-~~~~f~~v~l~~-~~~~~~l~~~l~~~~gv~v~----pg~~f~~~~~~~iRis~~------~~~~~l 391 (402)
T TIGR03542 324 ALEAAGFKVYGG-EHAPYLWVKTPE-GISSWDFFDFLLYQYHVVGT----PGSGFGPSGEGFVRFSAF------GKRENI 391 (402)
T ss_pred HHHhcCceecCC-CceeEEEEECCC-CCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCEEEEEec------CCHHHH
Confidence 998888776543 345677888753 4566565554 567899995 4433 2223578999842 247888
Q ss_pred HHHHHHHHHH
Q 009673 467 VAIADFIHEG 476 (529)
Q Consensus 467 ~~la~~i~~~ 476 (529)
++..+.|+++
T Consensus 392 ~~~l~~l~~~ 401 (402)
T TIGR03542 392 VEACERIKEA 401 (402)
T ss_pred HHHHHHHHhh
Confidence 8888888764
No 177
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.87 E-value=6.6e-20 Score=207.15 Aligned_cols=298 Identities=21% Similarity=0.190 Sum_probs=207.3
Q ss_pred HHHHHHHHHcCCCCCCCceeeecCChH---HHHHHHHHhhcCC-CC----EEEEcCCCCCccccccccccccccccccce
Q 009673 152 LCQKRALAAFNLDENKWGVNVQPLSGS---PANFEVYTAILKP-HD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 223 (529)
Q Consensus 152 ~a~~~la~~~g~~~~~~~~~V~~~sGs---~A~~~~l~all~p-GD----~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~ 223 (529)
.+++++++++|.+. +.+++.+|+ .++..++.++.++ || +|++++.+|+.+.... .+.|.
T Consensus 572 ~~r~~la~i~g~~~----v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a--------~~~G~- 638 (993)
T PLN02414 572 DLGDLLCEITGFDS----FSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASA--------AMCGM- 638 (993)
T ss_pred HHHHHHHHHhCCCe----EEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHH--------HHCCC-
Confidence 56799999999954 678888885 4788888888876 98 8999999988775322 23454
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHhhh--cCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 224 FESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 224 ~~~v~~~v~~~~~~iD~d~le~~i~~--~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
+++.++++ +++.+|+++|++++++ .++++|++.+++|-+ ..|+++|+++|+++|+++++|++|..++... .
T Consensus 639 -~vv~v~~d-~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l---~ 713 (993)
T PLN02414 639 -KIVVVGTD-AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGL---T 713 (993)
T ss_pred -EEEEeccC-CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCc---C
Confidence 77777776 5789999999999985 257888888766554 5679999999999999999999998776421 2
Q ss_pred CCCC-cccEEEecccccccCCC-----C-eEEEeeCCCcchhHHHhhhccc----------cc-CCCCCC----ChHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR-----G-GMIFFKKDPVLGVELESAINNA----------VF-PGLQGG----PHNHTI 357 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr-----g-G~i~~~~~~~~~~~l~~~i~~~----------~~-p~~~g~----p~~~~i 357 (529)
.|.+ ++||+++|.||||.||. | |++++++. +...+-.. .+ +...|+ +..+..
T Consensus 714 ~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~------L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al 787 (993)
T PLN02414 714 SPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH------LAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSAL 787 (993)
T ss_pred CccccCCCEEEecCCccCCcCcccCCCCeeeEEEchh------hcccCCCCccccCCCcccccCCCCcCCccchhhhhHH
Confidence 2333 79999999999986554 3 88888873 32222100 00 111233 222222
Q ss_pred HHH-HHH-HHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCC---CCCceEEEccCC----CCCcHHHHHHhHhcC
Q 009673 358 GGL-AVC-LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG---SDNHLVLVDLRP----MGIDGARVEKILDMA 428 (529)
Q Consensus 358 aal-a~a-l~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~g---t~~~~~~v~~~~----~~i~~~~~~~~L~~~ 428 (529)
.++ +.+ +..+..+++++..++...|++++++.|.+ ++.+...+ ...|-++++++. .+++..++.+.|.++
T Consensus 788 ~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~-~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~ 866 (993)
T PLN02414 788 ILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEG-HYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDY 866 (993)
T ss_pred HHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHh-hCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHc
Confidence 221 122 34444456677788999999999999987 55544322 223455666652 246668888888899
Q ss_pred CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 009673 429 SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAK 484 (529)
Q Consensus 429 GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~~ 484 (529)
||.....+.| .++.+||+..... +++|++++++.+..+.....++.
T Consensus 867 Gihapt~~~p------v~~~lmiepTE~~----skeelDrf~~al~~i~~e~~~~~ 912 (993)
T PLN02414 867 GFHAPTMSWP------VPGTLMIEPTESE----SKAELDRFCDALISIREEIADIE 912 (993)
T ss_pred CcEEeeeccc------cCCEEEEEeeeeC----CHHHHHHHHHHHHHHHHHHHHHh
Confidence 9987432222 3678999876654 48999999999988887776553
No 178
>PLN03032 serine decarboxylase; Provisional
Probab=99.87 E-value=2.8e-19 Score=184.62 Aligned_cols=264 Identities=17% Similarity=0.150 Sum_probs=188.3
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCC-ceeeecCChHHHHHHHHHhhc--C
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKW-GVNVQPLSGSPANFEVYTAIL--K 190 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~-~~~V~~~sGs~A~~~~l~all--~ 190 (529)
....+++++...+.+.+ |.|.+.+..|.. ..++|+.+++++++++|.+++++ + +.+++||+||+.++.+.. .
T Consensus 35 ~~~~~~~~~~~~~~~~~--gnP~s~~~~g~~-a~~~e~~v~~~ia~llg~~~~~~~G--~fTsGGTEaNl~al~~ar~~~ 109 (374)
T PLN03032 35 FDYGELSQLMKYSINNL--GDPFIESNYGVH-SRQFEVGVLDWFARLWELEKDEYWG--YITTCGTEGNLHGILVGREVF 109 (374)
T ss_pred cChHHHHHHHHhcccCC--CCCcccCCCCcc-HHHHHHHHHHHHHHHhCCCCccCCE--EEeCchHHHHHHHHHHHHHhC
Confidence 45567888888776655 677665433333 56788899999999999987653 3 334666799998877653 3
Q ss_pred CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEc--CCCCCCCC
Q 009673 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAG--ASAYPRDF 266 (529)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~~--~s~~p~~~ 266 (529)
+++.|+++..+|.+.. +.+...|.. +..++++ .++.+|+++|++++++. +|.+|+++ ++..+.+.
T Consensus 110 ~~~~vi~s~~~H~Sv~--------kaa~~lg~~--~~~V~~d-~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~id 178 (374)
T PLN03032 110 PDGILYASRESHYSVF--------KAARMYRME--AVKVPTL-PSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVD 178 (374)
T ss_pred CCcEEEeCCCceeHHH--------HHHHHcCCC--CeEeeeC-CCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCC
Confidence 5668888777665442 233445543 3345566 46899999999999763 46677765 33444589
Q ss_pred CHHHHHHHHHHhC-----CEEEEecccccccccccccCC--CC-CcccEEEecccccccCCCC-eEEEeeCCCcchhHHH
Q 009673 267 DYPRMRQIADAVG-----ALLMMDMAHISGLVAASVVAD--PF-KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (529)
Q Consensus 267 d~~~i~~ia~~~g-----~~livD~ah~~Gli~~~~~~~--~~-~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~ 337 (529)
|+++|+++|+++| +|+++|+|++.+.++...... .+ .++|.++.|+||++..|.| |+++++++ +.
T Consensus 179 pi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~------~~ 252 (374)
T PLN03032 179 DLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKK------HV 252 (374)
T ss_pred CHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEch------hh
Confidence 9999999999996 599999998777664321111 12 2589999999998766999 99999973 33
Q ss_pred hhhccc------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec
Q 009673 338 SAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (529)
Q Consensus 338 ~~i~~~------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~ 399 (529)
+.+... ....+.|+.+-...++++.+|+....++|.+..++..++++++.+.|++.|+.++.
T Consensus 253 ~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~ 320 (374)
T PLN03032 253 KALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRL 320 (374)
T ss_pred HhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEE
Confidence 333210 11234566555566777778888877889999999999999999999998888765
No 179
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.87 E-value=4e-20 Score=189.86 Aligned_cols=271 Identities=13% Similarity=0.074 Sum_probs=179.4
Q ss_pred HHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC
Q 009673 154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (529)
Q Consensus 154 ~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~ 232 (529)
++.+++.+|++.. +|.+++|+ +++..++. +++||+ |++++|.|..+. ..+...|. +++.++++
T Consensus 46 r~~ia~~~~~~~~----~I~it~Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~--------~~~~~~G~--~v~~vp~~ 109 (332)
T PRK06425 46 EDQIKIYTQGLKI----KVLIGPGLTHFIYRLLS-YINVGN-IIIVEPNFNEYK--------GYAFTHGI--RISALPFN 109 (332)
T ss_pred HHHHHHHhCCCcc----eEEECCCHHHHHHHHHH-HhCCCc-EEEeCCChHHHH--------HHHHHcCC--eEEEEeCC
Confidence 3678889999874 57779998 88887776 578875 555688664432 23445665 66666665
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-
Q 009673 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K- 303 (529)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~- 303 (529)
. ..+|.+.+++ .++|+|++++|+||+ ..+ +++|.++|+++|++||+|++ |..+.+.+ .+... +
T Consensus 110 ~--~~~~~~~l~~----~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~-Y~~~~~~~-~~~~~~~~~~ 181 (332)
T PRK06425 110 L--INNNPEILNN----YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEA-FIDFVPNR-AEEDVLLNRS 181 (332)
T ss_pred c--ccCcHHHHhh----cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecc-hhcccccc-chhHHHHhcc
Confidence 3 3456555542 389999999999997 444 66777788999999999998 44444322 11111 1
Q ss_pred c-ccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchH-HHHHHHH
Q 009673 304 Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKV 379 (529)
Q Consensus 304 ~-aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i 379 (529)
+ --+++.|++|++ +|+|.||+++++ ++.+.+.....+...+ ..+. . ++.......+ ++..+.+
T Consensus 182 ~~~vi~~~SfSK~~~l~GlRiGy~v~~~------~li~~l~~~~~~~~~~-----~~~~-~-~l~~~~~~~~~~~~~~~~ 248 (332)
T PRK06425 182 YGNVIIGRSLTKILGIPSLRIGYIATDD------YNMKISRKITEPWSVC-----DPAI-D-FIRSIDLDYVAKHSLDIM 248 (332)
T ss_pred CCCEEEEeecHHhcCCchhhheeeecCH------HHHHHHHHcCCCCccC-----HHHH-H-HHHHhhhHHHHHHHHHHH
Confidence 1 127889999975 799999999987 7777776543322111 1111 1 1221111222 4567788
Q ss_pred HHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCcc
Q 009673 380 VSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTT 458 (529)
Q Consensus 380 ~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt 458 (529)
.++++.+.+.|++.|+.+..+. ...++|+.+. +..++.+.|.++||.+.. |.. +...++++||++.
T Consensus 249 ~~~r~~l~~~L~~~g~~~~~~~-~g~f~~~~~~----~~~~~~~~l~~~gi~v~~----~~~f~~~~~~~iRis~~---- 315 (332)
T PRK06425 249 ENERSYLINNLEAMGFRAAGDP-SANFITFMIP----DAHDFYSYLLKNGILVRL----LDDYECLGEQYIRIAIR---- 315 (332)
T ss_pred HHHHHHHHHHHHHCCCEECCCC-CceEEEEEcC----CHHHHHHHHHHCCeEEEE----CCCCCCCCCCEEEEEeC----
Confidence 8889999999998888876432 3456777663 456777777788999954 332 1223578999964
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 009673 459 RGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 459 ~g~~~~d~~~la~~i~~~~ 477 (529)
+.++++++.++|++++
T Consensus 316 ---~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 316 ---RRSFNIKLVNALRNFL 331 (332)
T ss_pred ---CHHHHHHHHHHHHHHh
Confidence 3689999999998764
No 180
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.86 E-value=4.9e-21 Score=193.26 Aligned_cols=220 Identities=18% Similarity=0.153 Sum_probs=155.9
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC
Q 009673 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (529)
Q Consensus 153 a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~ 232 (529)
+++.++++||.+. +.+.+.+++.++.+++.++++|||+|++..+.|.+++. .+...|. +++.++.+
T Consensus 64 ~~~~~A~~~ga~~----~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~--------~~~~~g~--~~~~v~~~ 129 (294)
T cd00615 64 AQELAARAFGAKH----TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVIN--------GLVLSGA--VPVYLKPE 129 (294)
T ss_pred HHHHHHHHhCCCC----EEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHH--------HHHHCCC--EEEEecCc
Confidence 4478899999875 22333344589999999999999999999987765431 2344555 44444433
Q ss_pred CCC-----CCCCHHHHHHHhhh-cCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCC-C-
Q 009673 233 EST-----GLVDYDMLEKTAIL-FRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K- 303 (529)
Q Consensus 233 ~~~-----~~iD~d~le~~i~~-~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~- 303 (529)
.+. +.+|++++++.+++ .++++|++++|++.+ ..|+++|.++|+++|+++++|+||+.++...+..+... .
T Consensus 130 ~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~ 209 (294)
T cd00615 130 RNPYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMA 209 (294)
T ss_pred cCcccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhc
Confidence 222 47999999999975 268888888776544 78999999999999999999999886654333222222 2
Q ss_pred cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673 304 YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (529)
Q Consensus 304 ~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~ 382 (529)
++|++++|+||+++|+++ |++..+++.. ...++.........++|++..++++..+++.+.. +..++.++..++
T Consensus 210 ~~div~~S~hK~l~g~~~~~~l~~~~~~~----~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~-~g~~~~~~~~~~ 284 (294)
T cd00615 210 GADIVVQSTHKTLPALTQGSMIHVKGDLV----NPDRVNEALNLHQSTSPSYLILASLDVARAMMAL-EGKELVEELIEL 284 (294)
T ss_pred CCcEEEEchhcccchHhHHHHHHhCCCcC----CHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHH-HhHHHHHHHHHH
Confidence 689999999999999886 6776665311 1222333222334578899999999988887642 336677888888
Q ss_pred HHHHHHHHH
Q 009673 383 CRALASRLV 391 (529)
Q Consensus 383 a~~l~~~L~ 391 (529)
++.+++.|.
T Consensus 285 ~~~~r~~l~ 293 (294)
T cd00615 285 ALYARQEIN 293 (294)
T ss_pred HHHHHHHHh
Confidence 888888775
No 181
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.86 E-value=5e-20 Score=194.22 Aligned_cols=287 Identities=17% Similarity=0.219 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHHHHHcC--CCCCCCceeee--cCChH-HHHHHHHH---hhcCCCCEEEEcCCCCCcccccccccccccc
Q 009673 146 IDELETLCQKRALAAFN--LDENKWGVNVQ--PLSGS-PANFEVYT---AILKPHDRIMGLDLPHGGHLSHGFMTPKRRV 217 (529)
Q Consensus 146 ~d~lE~~a~~~la~~~g--~~~~~~~~~V~--~~sGs-~A~~~~l~---all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i 217 (529)
..++.+.+.+++.+..+ ++++ +|. .+.|+ +|+..++. ++++|||+|++++|.|.++.. .+
T Consensus 74 ~~~lR~aia~~~~~~~~~~~~~~----~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~--------~~ 141 (404)
T PTZ00376 74 LQSFIEAAQKLLFGEASYALAEK----RIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVN--------IF 141 (404)
T ss_pred CHHHHHHHHHHhcCCCccccccC----eEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HH
Confidence 34565555566654433 2343 333 35555 77666554 678999999999998765432 33
Q ss_pred ccccceEEEEEcccC-CCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccc
Q 009673 218 SGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHI 289 (529)
Q Consensus 218 ~~~g~~~~~v~~~v~-~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~ 289 (529)
...|. +++++++. ++++.+|++.+++.++.. +++++++++|+||+ .. ++++|.++|++||+++|+|++ |
T Consensus 142 ~~~G~--~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~-Y 218 (404)
T PTZ00376 142 KSAGL--NVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMA-Y 218 (404)
T ss_pred HHcCC--ceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehh-h
Confidence 45565 66777773 235889999999988642 34677778999997 33 577888899999999999998 5
Q ss_pred cccccccc---cCC--CCC-cc--cEEEecccccc--cCCCCeEEE---eeCCCcchhHHHh----hhcccccCCCCCCC
Q 009673 290 SGLVAASV---VAD--PFK-YC--DVVTTTTHKSL--RGPRGGMIF---FKKDPVLGVELES----AINNAVFPGLQGGP 352 (529)
Q Consensus 290 ~Gli~~~~---~~~--~~~-~a--Div~~S~hK~l--~GprgG~i~---~~~~~~~~~~l~~----~i~~~~~p~~~g~p 352 (529)
.++.+.+. ... .+. .. -++++|+||++ +|+|.||++ .++ ++.+ .+.+.......+.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~ 292 (404)
T PTZ00376 219 QGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANK------EEAANVLSQLKLIIRPMYSSPP 292 (404)
T ss_pred cCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCH------HHHHHHHHHHHHHHhhhcCCCc
Confidence 55554321 100 011 11 27889999986 699999984 444 4333 22221111122222
Q ss_pred hHHHHHHHHHHHHHhc--C---chHHHHHHHHHHHHHHHHHHHHhcCc----EEecCCCCCceEEEccCCCCCcHHHHHH
Q 009673 353 HNHTIGGLAVCLKHAQ--S---PEFKVYQNKVVSNCRALASRLVELGY----KLVSGGSDNHLVLVDLRPMGIDGARVEK 423 (529)
Q Consensus 353 ~~~~iaala~al~~~~--~---~~~~~~~~~i~~~a~~l~~~L~~~G~----~v~~~gt~~~~~~v~~~~~~i~~~~~~~ 423 (529)
...+. +.+.+++.-. . ...++..+++.++++.+.+.|.+.++ .+..+ ..+.+.|+++ +.+.++.
T Consensus 293 ~~~q~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p-~gg~f~~~~~-----~~~~~~~ 365 (404)
T PTZ00376 293 IHGAR-IADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIIN-QIGMFSFTGL-----TKEQVER 365 (404)
T ss_pred hHHHH-HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccc-CceEEEecCC-----CHHHHHH
Confidence 22222 2223342100 0 11234456778889999999988653 33332 2345666655 2355666
Q ss_pred hHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 424 ILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 424 ~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+++++||.+ +|| + ||++.. .++++++++++.|++++.
T Consensus 366 L~~~~~v~v----~p~--------~-Ris~~~-----~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 366 LIEKYHIYL----LDN--------G-RISVAG-----LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred HHHhCCEee----cCC--------C-eEEEec-----cCHHhHHHHHHHHHHHHh
Confidence 777889998 453 2 998743 457999999999998765
No 182
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.86 E-value=2e-19 Score=190.64 Aligned_cols=300 Identities=17% Similarity=0.171 Sum_probs=193.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh---------cCCCCEEEEcCCCCCcccccccccccc
Q 009673 145 YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---------LKPHDRIMGLDLPHGGHLSHGFMTPKR 215 (529)
Q Consensus 145 ~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al---------l~pGD~Vl~~~~~~~g~~s~g~~~~~~ 215 (529)
...++| +.+++++|.+. .+.++||++|+..++.++ ++|||+|++++++|.+...
T Consensus 64 ~~~~fe----~~lA~~~g~~~-----~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~-------- 126 (438)
T PRK15407 64 FNDAFE----KKLAEFLGVRY-----ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVN-------- 126 (438)
T ss_pred hHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHH--------
Confidence 456676 67888999874 355688999999988876 4899999999988755421
Q ss_pred ccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccc
Q 009673 216 RVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA 295 (529)
Q Consensus 216 ~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~ 295 (529)
.+...|. +++.++++++++.+|++++++.+++ ++++|++.++ .+...|+++|.++|+++|++||+|++|+.|..+.
T Consensus 127 ~v~~~G~--~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~~~-~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~ 202 (438)
T PRK15407 127 PIIQNGL--VPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIAHT-LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYD 202 (438)
T ss_pred HHHHcCC--EEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEeCC-CCChhhHHHHHHHHHHCCCEEEEECccchhhhcC
Confidence 3334454 7778888767789999999999987 8999888743 3335789999999999999999999999998765
Q ss_pred cccCCCCCcccEEEeccc--ccccCCCCeEEEeeCCCcchhHHHhhhcccccCC--------------------------
Q 009673 296 SVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG-------------------------- 347 (529)
Q Consensus 296 ~~~~~~~~~aDiv~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~-------------------------- 347 (529)
+..... ..|+.++|+| |.++...||+++++++ ++.+++......+
T Consensus 203 g~~~G~--~gd~~~fSf~~~k~~~~geGG~l~t~d~-----~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (438)
T PRK15407 203 GRMTGT--FGDIATLSFYPAHHITMGEGGAVFTNDP-----LLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPF 275 (438)
T ss_pred Ceeeec--cCceEEEeCCCCCCccccCceEEEECCH-----HHHHHHHHHHHhCcccccccccccccccccccccccccc
Confidence 532211 3588888887 6576556899999985 4443322110000
Q ss_pred ---------CCCC-ChHH-HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-C-cEEec--CCCCC--ceEEEc
Q 009673 348 ---------LQGG-PHNH-TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-G-YKLVS--GGSDN--HLVLVD 410 (529)
Q Consensus 348 ---------~~g~-p~~~-~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G-~~v~~--~gt~~--~~~~v~ 410 (529)
..|. ..+. ..||+ ++.++ ..+++..++.+++++.+.+.|.+. + +.+.. ++... +.+.+-
T Consensus 276 ~~~~~~~~~~~G~n~rmsel~AAi--g~~qL--~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~ 351 (438)
T PRK15407 276 GYDHKYTYSHLGYNLKITDMQAAI--GLAQL--EKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPIT 351 (438)
T ss_pred cccccccccccccccCccHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEE
Confidence 0010 0111 22332 23333 345677888888899999999763 3 22221 12211 222333
Q ss_pred cCC-CCCcHHHHHHhHhcCCeEEcCCCC-CCCCCC-CC----------CC----eEE-EccCCCccCCCCHHHHHHHHHH
Q 009673 411 LRP-MGIDGARVEKILDMASITLNKNSV-PGDKSA-LV----------PG----GIR-IGSPAMTTRGFSEKEFVAIADF 472 (529)
Q Consensus 411 ~~~-~~i~~~~~~~~L~~~GI~v~~~~~-Pg~~~~-~~----------~~----~iR-ig~~~~tt~g~~~~d~~~la~~ 472 (529)
+.. .+.+.+++.+.|.+.||.++..+. |-+..+ +. |. .-| |++|.. .+++++|++++++.
T Consensus 352 ~~~~~~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~--~~l~~~~v~~i~~~ 429 (438)
T PRK15407 352 VKEDAGFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVY--PGLTEEMLDYVIEK 429 (438)
T ss_pred ECCcCCCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCC--CCCCHHHHHHHHHH
Confidence 322 245678899999999998764432 222100 00 00 001 233322 35889999999999
Q ss_pred HHHHHH
Q 009673 473 IHEGVE 478 (529)
Q Consensus 473 i~~~~~ 478 (529)
|+++++
T Consensus 430 i~~~~~ 435 (438)
T PRK15407 430 IEEFFG 435 (438)
T ss_pred HHHHHh
Confidence 998774
No 183
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.86 E-value=1.1e-19 Score=189.61 Aligned_cols=320 Identities=12% Similarity=0.083 Sum_probs=200.0
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCCC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~pG 192 (529)
.+++-++++...+.+.+. ++..+..+++| +++++++|.+. .+.+++|++|+.+++.++ ++||
T Consensus 9 ~~~~~~~~~~~~l~~~~~--------~g~~~~~~~~e----~~la~~~g~~~-----~v~~~sgt~al~~~l~~~~~~~G 71 (375)
T PRK11706 9 VVGTELDYIQQAMSSGKL--------CGDGGFTRRCQ----QWLEQRFGSAK-----VLLTPSCTAALEMAALLLDIQPG 71 (375)
T ss_pred CCHHHHHHHHHHHHcCCc--------cCCCHHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHhCCCCC
Confidence 344456666666654432 22124456666 67788899864 244567779988777766 7999
Q ss_pred CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHH
Q 009673 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMR 272 (529)
Q Consensus 193 D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~ 272 (529)
|+|++++++|.+.. ..+...|. +++.++++++++.+|++++++.+++ ++|+|++.++ ++...|+++|.
T Consensus 72 d~Viv~~~t~~~~~--------~~~~~~G~--~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~~~-~G~~~~~~~i~ 139 (375)
T PRK11706 72 DEVIMPSYTFVSTA--------NAFVLRGA--KIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPVHY-AGVACEMDTIM 139 (375)
T ss_pred CEEEECCCCcHHHH--------HHHHHcCC--EEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEeCC-CCCccCHHHHH
Confidence 99999998775442 13344565 7788888877788999999999987 8999887643 45578999999
Q ss_pred HHHHHhCCEEEEecccccccccccccCCCCC-cccEEEeccc--ccccCCCCeEEEeeCCCcchhHHHhhhcccccCC--
Q 009673 273 QIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG-- 347 (529)
Q Consensus 273 ~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~-- 347 (529)
++|+++|++||+|++|+.|....+. ++. ..|+.++|+| |.++...||+++++++ ++.+++......+
T Consensus 140 ~la~~~~i~vIeD~a~a~g~~~~~~---~~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~-----~~~~~~~~~~~~g~~ 211 (375)
T PRK11706 140 ALAKKHNLFVVEDAAQGVMSTYKGR---ALGTIGHIGCFSFHETKNYTAGEGGALLINDP-----ALIERAEIIREKGTN 211 (375)
T ss_pred HHHHHcCCEEEEECccccccccCCe---eeecCcCEEEEeCCCCccccccCCeEEEECCH-----HHHHHHHHHHHcCCC
Confidence 9999999999999999888643321 222 3688888888 9986556676777654 5554432211100
Q ss_pred ---------------CCCC-Ch-HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc---C-cEEe--cCCC--
Q 009673 348 ---------------LQGG-PH-NHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL---G-YKLV--SGGS-- 402 (529)
Q Consensus 348 ---------------~~g~-p~-~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~---G-~~v~--~~gt-- 402 (529)
..|. .. ....+++. +.++ ..+++..++..++++.+.+.|.+. | +.+. .++.
T Consensus 212 ~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~--~~ql--~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 287 (375)
T PRK11706 212 RSQFFRGQVDKYTWVDIGSSYLPSELQAAYL--WAQL--EAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKH 287 (375)
T ss_pred cchhhccCCCcceeeecccccCcCHHHHHHH--HHHH--HHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCce
Confidence 0111 11 12233322 2222 234556667777778888888663 2 3322 1111
Q ss_pred CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCC-CC---------CC----eEE-EccCCCccCCCCHHHHH
Q 009673 403 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSA-LV---------PG----GIR-IGSPAMTTRGFSEKEFV 467 (529)
Q Consensus 403 ~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~-~~---------~~----~iR-ig~~~~tt~g~~~~d~~ 467 (529)
..+++++.+.. +.+.+++.+.|.++||.+...+.|.+..+ +. +. .=| +++|.. ..++++|++
T Consensus 288 ~~~~~~~~~~~-~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~--~~l~~~~~~ 364 (375)
T PRK11706 288 NAHMFYIKLRD-LEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLF--YNLTDVEQR 364 (375)
T ss_pred eeEEEEEEECC-cCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCC--CCCCHHHHH
Confidence 12344444432 34678899999999999875544533211 00 00 001 233322 358899999
Q ss_pred HHHHHHHHHH
Q 009673 468 AIADFIHEGV 477 (529)
Q Consensus 468 ~la~~i~~~~ 477 (529)
++++.|++++
T Consensus 365 ~i~~~i~~~~ 374 (375)
T PRK11706 365 TVIDTILEFF 374 (375)
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 184
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.86 E-value=1.4e-19 Score=186.52 Aligned_cols=325 Identities=15% Similarity=0.128 Sum_probs=213.1
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCC-CCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCC
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP 191 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~-~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~p 191 (529)
..|..|++++..++.+-.+.|... .......++.+.++ .+++.++++|+.+.+ +.+.+...|||.|+.+++..++.+
T Consensus 2 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~-~~~~~l~~l~~~~~~-~~v~~~~gsgT~a~ea~~~nl~~~ 79 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVAN-EAESDLRELLNIPDN-YEVLFLQGGATGQFAAVPLNLLAE 79 (349)
T ss_pred CCCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHH-HHHHHHHHHhCCCCC-ceEEEEcCCchHHHHHHHHhcCCC
Confidence 368899999998876422222110 11122445555555 567999999998433 224455566889999999999999
Q ss_pred CCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCH
Q 009673 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDY 268 (529)
Q Consensus 192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~ 268 (529)
||++++.... .+++.+. ......|. ...+..+-. +....+|+++++ +++ ++++|.+.+..+++ ..+
T Consensus 80 ~~~~l~i~~G---~fg~r~~---~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~v~~th~ETstGv~~~- 148 (349)
T TIGR01364 80 GKVADYIVTG---AWSKKAA---KEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISE-DAAYVHYCANETIHGVEFR- 148 (349)
T ss_pred CCeEEEEECC---HHHHHHH---HHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCC-CCCEEEEcCCCCcccEecc-
Confidence 9999988643 3333332 12233454 344342211 122356777665 334 78999887655544 333
Q ss_pred HHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccc---
Q 009673 269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAV--- 344 (529)
Q Consensus 269 ~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~--- 344 (529)
++++.+++++++|++++.|....++ +..|++++|.||+| ||.| |+++++++ ..++++...
T Consensus 149 ----~l~~~~~~l~iVDavss~g~~~id~-----~~~d~~~~ssqK~l-gP~Glg~l~~s~~------~~~~~~~~~~~~ 212 (349)
T TIGR01364 149 ----ELPDVKNAPLVADMSSNILSRPIDV-----SKFGLIYAGAQKNI-GPAGLTVVIVRKD------LLGRASRITPSM 212 (349)
T ss_pred ----eecccCCCeEEEEccccccCccCCH-----HHccEEEEeccccc-CCCceEEEEECHH------HHhhcccCCCCc
Confidence 6777789999999999888764332 23579999999998 6998 99999883 333221110
Q ss_pred --------cCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhc-CcEEecC--CCCC-ceEEEcc
Q 009673 345 --------FPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVEL-GYKLVSG--GSDN-HLVLVDL 411 (529)
Q Consensus 345 --------~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~--gt~~-~~~~v~~ 411 (529)
.....|+|+.+.+.++..+|+.+... ++++..++..+.++++.+.|++. |+..... ...+ ....+.+
T Consensus 213 ~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~ 292 (349)
T TIGR01364 213 LNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTL 292 (349)
T ss_pred chHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEec
Confidence 01123799999999999999998877 68999999999999999999997 6644421 1112 1223333
Q ss_pred CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 412 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 412 ~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
....+ ..++.+.+.+.||.+ .+|.. ..+.+|+|+..+++ ++|++++.++|+++++
T Consensus 293 ~~~~~-~~~~~~~~~~~Gi~~----~~~~~---~~g~vRvS~~~~nt----~edid~l~~al~~~~~ 347 (349)
T TIGR01364 293 GNEEL-EKRFLKEAEERGLVS----LKGHR---SVGGMRASIYNAMP----LEGVQALVDFMKEFQK 347 (349)
T ss_pred CChhH-hHHHHHHHHHCCCcc----cCCcc---ccCeeEEECcCCCC----HHHHHHHHHHHHHHHH
Confidence 32222 245556778899944 23322 24689999876654 8999999999998664
No 185
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.86 E-value=3.6e-20 Score=191.82 Aligned_cols=328 Identities=15% Similarity=0.119 Sum_probs=203.1
Q ss_pred eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCC-CCCCC---chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHH
Q 009673 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGG---NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (529)
Q Consensus 105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~-r~~~g---~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A 180 (529)
++++++...+|+.|++|+..++.+ |. .++. .|..+ .++.+.++ .+++.++++||++.++ .+.+...|||++
T Consensus 1 ~~~~pGp~~~p~~V~~a~~~~~~~-~~--~~~rg~~~~~~r~~~~~~~~~-~~r~~l~~l~~~~~~~-~vvf~~gs~T~a 75 (355)
T cd00611 1 INFSAGPAALPEEVLEQAQKELLD-FN--GLGMSVMEMSHRSKDFEAIVN-EAESDLRELLNIPDNY-KVLFLQGGATGQ 75 (355)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHhh-cc--cCCccccccCCCCHHHHHHHH-HHHHHHHHHhCCCCCc-eEEEEcCCchHH
Confidence 467888999999999999988744 32 2221 11112 34445555 5789999999984322 132333447799
Q ss_pred HHHHHHhhcC---CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCC-HHHHHHHhhhcCCcEEE
Q 009673 181 NFEVYTAILK---PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD-YDMLEKTAILFRPKLII 256 (529)
Q Consensus 181 ~~~~l~all~---pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD-~d~le~~i~~~~pklIi 256 (529)
+.+++.+++. +||.|+.- .+.+.+. ......|. ++..++.+.+....+ .+..+..+++ ++++|.
T Consensus 76 ~~~~~~~l~~~~~~~~~i~~g------~~~~~~~---~~a~~~g~--~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~lV~ 143 (355)
T cd00611 76 FAAVPLNLLGDKGTADYVVTG------AWSAKAA---KEAKRYGG--VVVIVAAKEEGKYTKIPDVETWDLAP-DAAYVH 143 (355)
T ss_pred HHHHHHhcCCCCCeEEEEECC------HHHHHHH---HHHHhcCC--CcEEEecccccCCCCCCCHhhcCCCC-CCCEEE
Confidence 9999999987 55555432 1222110 01122243 333333432211223 2222233444 789998
Q ss_pred EcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhH
Q 009673 257 AGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVE 335 (529)
Q Consensus 257 ~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~ 335 (529)
+++..+.+-..+ .++++.+|+++++|++|++|....++. ..|++++|.||+| ||.| |+++++++
T Consensus 144 ~~h~~t~tG~~~---~~i~~~~g~~~~VDa~qs~g~~~idv~-----~~~~~~ss~~K~l-GP~G~g~l~~~~~------ 208 (355)
T cd00611 144 YCSNETIHGVEF---DEVPDTGGVPLVADMSSNILSRPIDVS-----KFGVIYAGAQKNL-GPAGVTVVIVRKD------ 208 (355)
T ss_pred EeCCcccccEEc---ceecccCCCeEEEEccccccCCCCCHH-----HhCEEEeeccccc-CCCceEEEEECHH------
Confidence 876555541112 245566999999999999987644332 2456777799987 7998 99999883
Q ss_pred HHhhhccc-----------ccCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhc-CcE-EecC-
Q 009673 336 LESAINNA-----------VFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVEL-GYK-LVSG- 400 (529)
Q Consensus 336 l~~~i~~~-----------~~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~-G~~-v~~~- 400 (529)
+.+++... ......|+|+.+.+.++..+++.+... +++...++..+.++++.+.|.+. |+. ...+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~ 288 (355)
T cd00611 209 LLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDK 288 (355)
T ss_pred HHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCH
Confidence 33322210 001125799999999999999998877 68999999999999999999996 852 2111
Q ss_pred CCCCceEEEccCCCCC-cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 401 GSDNHLVLVDLRPMGI-DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 401 gt~~~~~~v~~~~~~i-~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
..... .++.+...++ ...+....+.+.|+.+ .+++. ..+.+|+|+..++| ++|++++.++|+++
T Consensus 289 ~~rs~-~vvsf~~~~~~l~~~~~~~~~r~G~~~----~~~~~---~~g~vR~S~~~~nt----~edi~~l~~al~~~ 353 (355)
T cd00611 289 RARSR-MNVPFRLGKEELEKEFLKEAEAAGMIG----LKGHR---SVGGIRASIYNALS----LEGVQALADFMKEF 353 (355)
T ss_pred HHcCc-eEEEEEcCChhhhHHHHHHHHHCCCcc----cCCCc---ccCeEEEEccCCCC----HHHHHHHHHHHHHH
Confidence 11121 2233332232 1134445677789964 23332 23689999977665 89999999999874
No 186
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.85 E-value=1.9e-19 Score=190.54 Aligned_cols=345 Identities=14% Similarity=0.090 Sum_probs=202.1
Q ss_pred cceeEecCCCC-C---cHHHHHHHhhhhhcc-CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673 103 KSLELIASENF-T---SRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~asen~-~---~~~V~eal~~~l~~~-y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG 177 (529)
+.|+|..+... . .+.+.+++...+... +.. ....|+......++.+.+.+++.+.+|.+.+. -+|.+++|
T Consensus 31 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~--~~I~it~G 105 (416)
T PRK09440 31 GAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTE---ALGNYDGPQGKDELIEALAALLNERYGWNISP--QNIALTNG 105 (416)
T ss_pred CceeccCCCCCccCCHHHHHHHHHHHHhcCccccc---ccccCCCCCCCHHHHHHHHHHHHHHhCCCCCh--hhEEEccC
Confidence 45888765432 2 235666666554321 100 00112222223456656668888777765321 36778999
Q ss_pred H-HHHHHHHHhhcC-----CCCEEEE-cCCCCCccccccccccccccccccceEEEEEcccCCC--CCCCCHHHHHHHhh
Q 009673 178 S-PANFEVYTAILK-----PHDRIMG-LDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAI 248 (529)
Q Consensus 178 s-~A~~~~l~all~-----pGD~Vl~-~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~--~~~iD~d~le~~i~ 248 (529)
+ +|+..++.++++ |||.|++ .+|+|.++..... .. . .+.+....+++ ++.+ .+.+|+++++ +.
T Consensus 106 a~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~--~~-~-~~~~~~~~~~~--~~~~~~~~~~d~~~l~--~~ 177 (416)
T PRK09440 106 SQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGL--EE-D-LFVSYRPNIEL--LPEGQFKYHVDFEHLH--ID 177 (416)
T ss_pred hHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhh--cc-C-ceeeccccccc--ccccccccCCCHHHcc--cC
Confidence 8 899989999885 6999999 6998866532110 00 0 01111112222 3322 3579999997 34
Q ss_pred hcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCC--CC-CcccEEEeccccc-ccCC
Q 009673 249 LFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PF-KYCDVVTTTTHKS-LRGP 319 (529)
Q Consensus 249 ~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~-~~aDiv~~S~hK~-l~Gp 319 (529)
. +++++++++|+||+ .. .+++|.++|+++|++||+|+++... ........ +. ..--|+++|++|+ ++|+
T Consensus 178 ~-~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~-~~~~~~~~~~~~~~~~vI~~~SfSK~~~pGl 255 (416)
T PRK09440 178 E-DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPP-FPGIIFSEATPLWNPNIILCMSLSKLGLPGV 255 (416)
T ss_pred C-CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCcccc-CCCcchhhcCccccCCeEEEecccccCCCcc
Confidence 4 78999999999997 34 4778888999999999999996421 10000000 00 1112778999997 4899
Q ss_pred CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHH-----HHHHHHHHHHHHHHHHHh--
Q 009673 320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV-----YQNKVVSNCRALASRLVE-- 392 (529)
Q Consensus 320 rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~-----~~~~i~~~a~~l~~~L~~-- 392 (529)
|.||+++++ ++.+++.........+.+...+.++ +.++. ..++.. ..+.+.++++.+.+.|.+
T Consensus 256 RiG~~i~~~------~l~~~~~~~~~~~~~~~s~~~q~~~-~~~l~---~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l 325 (416)
T PRK09440 256 RCGIVIADE------EIIEALSNMNGIISLAPGRLGPAIA-AEMIE---SGDLLRLSETVIRPFYRQKVQLAIALLRRYL 325 (416)
T ss_pred eEEEEeCCH------HHHHHHHHHHHHhccCCCcHHHHHH-HHHhc---cchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999987 6777665433222222223333332 23343 222321 334455666777777765
Q ss_pred --cCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCC--CCCCC--CCCCeEEEccCCCccCCCCHHHH
Q 009673 393 --LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVP--GDKSA--LVPGGIRIGSPAMTTRGFSEKEF 466 (529)
Q Consensus 393 --~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~P--g~~~~--~~~~~iRig~~~~tt~g~~~~d~ 466 (529)
.++.+..+ ..+.++|+++...+++..++.+.|.++||.+.++... +.... ...+++||++. .+++++
T Consensus 326 ~~~~~~~~~p-~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~------~~~~~l 398 (416)
T PRK09440 326 PDEPCLIHKP-EGAIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV------QDDEEI 398 (416)
T ss_pred ccCCeEEecC-CCceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEec------CCHHHH
Confidence 24454433 2356778888643456677778888999999654321 11000 01358999964 247999
Q ss_pred HHHHHHHHHHHHH
Q 009673 467 VAIADFIHEGVEI 479 (529)
Q Consensus 467 ~~la~~i~~~~~~ 479 (529)
++..+.|.+++..
T Consensus 399 ~~~i~~l~~~~~~ 411 (416)
T PRK09440 399 EKGIAILAEEVEK 411 (416)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999888764
No 187
>PRK05968 hypothetical protein; Provisional
Probab=99.85 E-value=5.7e-20 Score=192.38 Aligned_cols=290 Identities=17% Similarity=0.138 Sum_probs=190.8
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++...++| +.+++++|.+. .+.++||+.|+..++.++++|||+|++..+.|++.+... ...+...|
T Consensus 61 ~~p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~----~~~~~~~G 127 (389)
T PRK05968 61 DNPTVRAFE----EMLAKLEGAED-----ARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLF----ETILKRMG 127 (389)
T ss_pred CChhHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHH----HHHHHHcC
Confidence 345567777 67889999975 245689999999999999999999999998877653211 01122334
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. +++.++. .|++++++.+ + ++|+|++.+|.++. ..|+++|.++|+++|+++++|++|..+...
T Consensus 128 ~--~v~~vd~------~d~~~l~~~i-~-~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~----- 192 (389)
T PRK05968 128 V--EVDYVDG------RDEEAVAKAL-P-GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQ----- 192 (389)
T ss_pred c--eEEEeCC------CCHHHHHHhc-c-cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhcc-----
Confidence 3 5555432 2889999888 4 68999998877776 579999999999999999999998665421
Q ss_pred CCCC-cccEEEecccccccCC---CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
.|+. ++|++++|+||++.|| ++|+++.++ ++.+++.....+...+..+. ..+++ .+..+ ..+..+
T Consensus 193 ~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~------~~~~~l~~~~~~~~g~~~~~-~~A~~--~l~~L--~tl~~r 261 (389)
T PRK05968 193 RPITLGVDLVIHSASKYLGGHSDTVAGVVAGSK------EHIARINAEAYPYLGAKLSP-FEAWL--LLRGL--RTLPLR 261 (389)
T ss_pred CchhcCCcEEEeeccccccCCCCeEEEEEEECH------HHHHHHHHHHHHhCCCCCCh-HHHHH--HHccc--CcHHHH
Confidence 2333 6899999999999875 468888776 56666554322222122221 22221 23322 234677
Q ss_pred HHHHHHHHHHHHHHHHh-cCcEEec-CCCCC----------ceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCC-----C
Q 009673 376 QNKVVSNCRALASRLVE-LGYKLVS-GGSDN----------HLVLVDLRPMGIDGARVEKILDMASITLNKNSV-----P 438 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~-~G~~v~~-~gt~~----------~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~-----P 438 (529)
.++..++++.+.+.|++ .++..+. ++..+ .++.+++.. +.+..++.+.|+..++.++.+.. |
T Consensus 262 ~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~-~~~~~~f~~~L~~~~~~~s~G~~~slv~p 340 (389)
T PRK05968 262 MKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE-GIDVRAFADALKLFRLGVSWGGHESLVVP 340 (389)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC-HHHHHHHHHhCCccEEecCCCCCCceeee
Confidence 88888999999999988 4664443 32111 244455542 33455677778777777765421 3
Q ss_pred CCCC-----------C--CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 439 GDKS-----------A--LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 439 g~~~-----------~--~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
.... . ..++-||+|+.. |+.+.+.+-|.+++..
T Consensus 341 ~~~~~~~~~~~~~~~~~gi~~~liR~SvGl--------E~~~dl~~dl~~al~~ 386 (389)
T PRK05968 341 AEVVLQQKAQPNSAARFGVSPRSVRLHVGL--------EGTEALWADLEQALAA 386 (389)
T ss_pred CcccccccCCHHHHHhcCCCCCeEEEEecc--------CCHHHHHHHHHHHHHH
Confidence 2110 0 114579998653 5677777777777653
No 188
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=2.8e-19 Score=183.79 Aligned_cols=303 Identities=17% Similarity=0.168 Sum_probs=200.6
Q ss_pred hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC---CCCCCCceeeecCC
Q 009673 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN---LDENKWGVNVQPLS 176 (529)
Q Consensus 102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g---~~~~~~~~~V~~~s 176 (529)
.+.|+|..++|+ +|+.+++++...+.......||. . ...+++ +.+++.++ ++++ +|.+++
T Consensus 19 ~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~------~-~~~~Lr----~aia~~~~~~~~~~~----~i~it~ 83 (335)
T PRK14808 19 RDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYD------S-PDEELI----EKILSYLDTDFLSKN----NVSVGN 83 (335)
T ss_pred CceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC------C-ChHHHH----HHHHHHhCCCCCCcc----eEEEcC
Confidence 366889888874 68899999887654221111222 1 134454 44555555 6554 577799
Q ss_pred hH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673 177 GS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (529)
Q Consensus 177 Gs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI 255 (529)
|+ +++..++.++ |.|++++|.|.++. ..+...|. +++.+++++ ++.+|.+. + . ++++|
T Consensus 84 Ga~~~i~~~~~~~----d~v~v~~P~y~~~~--------~~~~~~g~--~~~~v~~~~-~~~~~~~~----~-~-~~~~i 142 (335)
T PRK14808 84 GADEIIYVMMLMF----DRSVFFPPTYSCYR--------IFAKAVGA--KFLEVPLTK-DLRIPEVN----V-G-EGDVV 142 (335)
T ss_pred CHHHHHHHHHHHh----CcEEECCCCHHHHH--------HHHHHcCC--eEEEecCCC-cCCCChhH----c-c-CCCEE
Confidence 98 8998888877 78999998765442 23445665 666777763 45555332 2 2 57899
Q ss_pred EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-c-ccEEEecccccc--cCCCCeEEEeeCC
Q 009673 256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKSL--RGPRGGMIFFKKD 329 (529)
Q Consensus 256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~-aDiv~~S~hK~l--~GprgG~i~~~~~ 329 (529)
++++|+||+ ..+.+++.+|+ +++++||+|+++. .+.. ......+. . --+++.|++|++ +|+|.||+++++
T Consensus 143 ~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~-~f~~-~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~- 218 (335)
T PRK14808 143 FIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYY-EFHG-ESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSE- 218 (335)
T ss_pred EEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchh-hhcC-CchHHHHHhCCCEEEEEechhhccCcccceEEEEeCH-
Confidence 999999997 77888999998 5799999999853 3321 11111111 1 127889999986 599999999987
Q ss_pred CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEE
Q 009673 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 409 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v 409 (529)
++.+.+.....+ .+.....+.++ ..+++. ...+++..+.+.++++.+.+.|++.|+.+..+ +..++|+
T Consensus 219 -----~~~~~l~~~~~~--~~~~~~~q~a~-~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~--~g~f~~~ 286 (335)
T PRK14808 219 -----KFIDAYNRVRLP--FNVSYVSQMFA-KVALDH--REIFEERTKFIVEERERMKSALREMGYRITDS--RGNFVFI 286 (335)
T ss_pred -----HHHHHHHHhcCC--CCCCHHHHHHH-HHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC--CCeEEEE
Confidence 677777654422 22223333333 334542 12346667778888889999999888886654 3456677
Q ss_pred ccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 410 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 410 ~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
.+. +.+..++.+.|.++||.|.. . ..++||++. +.++++++.+.|++
T Consensus 287 ~l~--~~~~~~~~~~l~~~Gi~V~~--~--------~~~~Risi~-------~~~~~~~~~~~l~~ 333 (335)
T PRK14808 287 FME--KEEKERLLEHLRAKNIAVRS--F--------REGVRITIG-------KREENDMILKELEV 333 (335)
T ss_pred eCC--CccHHHHHHHHHHCCeEEEE--C--------CCCeEEecC-------CHHHHHHHHHHHHh
Confidence 664 23456788889999999963 1 257999863 36899999988864
No 189
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.85 E-value=2e-19 Score=186.51 Aligned_cols=327 Identities=12% Similarity=0.045 Sum_probs=209.4
Q ss_pred eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 009673 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (529)
Q Consensus 105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~ 184 (529)
..+++++..++++|++++......-. +.+.| +.++.+.++ .+++.+++++|++.+ +.+.+...|||.++.++
T Consensus 5 ~~f~pGP~~~~~~v~~a~~~~~~~~~---~~~hr---~~~f~~~~~-~~r~~l~~l~~~~~~-~~v~f~~gs~T~a~~~~ 76 (361)
T TIGR01366 5 GRFGSGPSKVRLEQLQALTTTAASLF---GTSHR---QAPVKNLVG-RVREGLAELFSLPDG-YEVILGNGGATAFWDAA 76 (361)
T ss_pred CcccCCCcCCCHHHHHHHHhcCcccc---ccCcC---ChHHHHHHH-HHHHHHHHHhCCCCC-ceEEEECCchhHHHHHH
Confidence 45778888999999999874210000 11222 345566666 578999999999643 21222235578999999
Q ss_pred HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC-
Q 009673 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP- 263 (529)
Q Consensus 185 l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p- 263 (529)
+.+++.+ +.+++..-.++..+.|.. +.....+ ..+.+. ++ ++..++. .+.+ ++++|++++..+.
T Consensus 77 ~~~l~~~-~~l~i~~G~~~~~~~~~a----~~~~~~~-~~~~~~--~~-~~~~~~~-----~~~~-~~~lV~~~h~et~t 141 (361)
T TIGR01366 77 TFGLIEK-KSLHLSFGEFSSKFAKAV----KLAPWLG-EPIIVT--AD-PGSAPEP-----QADP-GVDVIAWAHNETST 141 (361)
T ss_pred HHhcccc-cccEEecCHHHHHHHHHH----HhhhccC-CceEEe--cC-CCCCCCC-----ccCC-CCCEEEEcccCCcc
Confidence 9998743 222222222222211111 0000111 123333 33 2333443 2334 7899988854443
Q ss_pred -CCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhc
Q 009673 264 -RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 341 (529)
Q Consensus 264 -~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~ 341 (529)
...|+++| ++++|+++++|+++++|....++ +.+|++++|.||+|.+|.| ++++.+++ +.+++.
T Consensus 142 G~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv-----~~~D~~~~s~~K~lg~~~Gl~~~~~s~~------~~~~~~ 207 (361)
T TIGR01366 142 GVAVPVRRP---EGSDDALVVIDATSGAGGLPVDI-----AETDVYYFAPQKNFASDGGLWLAIMSPA------ALERIE 207 (361)
T ss_pred ceecccccc---cccCCCeEEEEcCccccCCCCCH-----HHCCEEEEEchhhcCCCCceEEEEECHH------HHhhhh
Confidence 37888776 58899999999999988764432 2379999999999977766 55566663 222221
Q ss_pred --------------------ccccCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcC-cEEec
Q 009673 342 --------------------NAVFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-YKLVS 399 (529)
Q Consensus 342 --------------------~~~~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G-~~v~~ 399 (529)
...-.+..++|+...+.++..+++.+... +++...++..+.++++.+.|.+.+ ++++.
T Consensus 208 ~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~ 287 (361)
T TIGR01366 208 AIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFV 287 (361)
T ss_pred cccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCC
Confidence 11112446788888888999999988766 478888999999999999999976 45543
Q ss_pred CCC--CC-ceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 400 GGS--DN-HLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 400 ~gt--~~-~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
... .+ ....+.+ +.+++..++.+.|+++||.+.... ..+..+.+|||+..++| ++|+++++++|+++
T Consensus 288 ~~~~~~s~~v~~v~~-~~g~~~~~v~~~L~~~gI~i~~~~-----~~l~~~~vRis~~~~~t----~~di~~l~~al~~~ 357 (361)
T TIGR01366 288 TDPGKRSQVVGTIDF-VDDIDAATVAKILRANGIVDTEPY-----RKLGRNQLRVAMFPAID----PDDVEALTECVDWV 357 (361)
T ss_pred CChhhcccceEEEEC-CCccCHHHHHHHHHHCCCeeccCc-----cccCCCcEEEEcCCCCC----HHHHHHHHHHHHHH
Confidence 211 11 1234455 367888889999998999984321 12334679999987655 89999999999987
Q ss_pred HH
Q 009673 477 VE 478 (529)
Q Consensus 477 ~~ 478 (529)
++
T Consensus 358 ~~ 359 (361)
T TIGR01366 358 VE 359 (361)
T ss_pred Hh
Confidence 65
No 190
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.85 E-value=1.1e-19 Score=190.20 Aligned_cols=291 Identities=16% Similarity=0.133 Sum_probs=187.5
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+++| +.+++++|.+. .|.+.||+.|+..++.++++|||+|+++++.|++.+.... ......|
T Consensus 59 ~~pt~~~Le----~~lA~l~G~~~-----al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~----~~~~~~g 125 (386)
T PRK06767 59 GNPTVKLFE----ERMAVLEGGEE-----ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLE----VLEEKFM 125 (386)
T ss_pred CCcchHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHH----HHHhhcC
Confidence 345567777 67889999764 3567899999999999999999999999987765532110 0001112
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
+++..++ ..|++++++++++ ++++|++++++||+ ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 126 --i~~~~~~------~~d~~~l~~~i~~-~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~-----~ 191 (386)
T PRK06767 126 --ITHSFCD------METEADIENKIRP-NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYL-----Q 191 (386)
T ss_pred --eEEEEeC------CCCHHHHHHhhCc-CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 2222221 3488999999987 89999999999887 78999999999999999999999765432 2
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
.|+. ++|++++|++|++.|+. ||++++++ ++.+++.........+.... ..+++ ++..+. ....+
T Consensus 192 ~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~------~~i~~~~~~~~~~~g~~~~~-~~a~l--~~~~L~--tl~~r 260 (386)
T PRK06767 192 RPLELGCDAVVHSATKYIGGHGDVVAGVTICKT------RALAEKIRPMRKDIGGIMAP-FDAWL--LLRGLK--TLAVR 260 (386)
T ss_pred CchhcCCcEEEecCcceecCCCCceeEEEEeCh------HHHHHHHHHHHHHhCCCCCH-HHHHH--HHcCCC--cHHHH
Confidence 2343 78999999999997754 69999987 44433221111111111111 11221 222221 33567
Q ss_pred HHHHHHHHHHHHHHHHh-cCcEEec-CCC---------CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCC------CC
Q 009673 376 QNKVVSNCRALASRLVE-LGYKLVS-GGS---------DNHLVLVDLRPMGIDGARVEKILDMASITLNKNS------VP 438 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~-~G~~v~~-~gt---------~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~------~P 438 (529)
.++..++++.+++.|++ +++..+. +.. .+.++.+++.....+...+.+.|+..++.++.+. .|
T Consensus 261 ~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p 340 (386)
T PRK06767 261 MDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHP 340 (386)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCC
Confidence 78889999999999998 4776432 211 1234555554211234557777777888776542 13
Q ss_pred CCCC--C----------CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 439 GDKS--A----------LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 439 g~~~--~----------~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
...+ . ..++-||+++. -||.+.+.+-|.+++.
T Consensus 341 ~~~~~~~~~~~~~~~~gi~~~l~R~svG--------lE~~~dl~~dl~~al~ 384 (386)
T PRK06767 341 ATMTHAAIPAELRQEMGIYDNLIRLSVG--------LESWEDIVSDLEQALK 384 (386)
T ss_pred CccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHh
Confidence 2210 0 12356898864 3677777777777664
No 191
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.85 E-value=2e-19 Score=188.35 Aligned_cols=218 Identities=19% Similarity=0.179 Sum_probs=153.2
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+++| +++++++|.+. .+.++||+.|+..++.++++|||+|+++++.|++.+... ...+...|
T Consensus 57 ~~p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~----~~~~~~~G 123 (391)
T TIGR01328 57 GNPTVSNLE----GRIAFLEGTEA-----AVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALL----EHALTKFG 123 (391)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHH----HHHHhcCC
Confidence 345677777 67899999876 356689999999999999999999999998776543211 01122334
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. ++..++++ |++++++.+++ ++++|+++.++||+ ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 124 ~--~~~~vd~~------d~e~l~~~i~~-~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~-----~ 189 (391)
T TIGR01328 124 I--QVDFINMA------IPEEVKAHIKD-NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPML-----T 189 (391)
T ss_pred e--EEEEECCC------CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhcc-----C
Confidence 3 55565442 78999999987 89999999888886 77999999999999999999999876543 2
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
.++. ++|++++|++|+++|+. ||+++.++ ++.+++.........|+......+++ +++.+ ..+..+
T Consensus 190 ~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~------~li~~l~~~~~~~~~g~~l~~~~a~l--~l~~L--~tl~~r 259 (391)
T TIGR01328 190 NPVALGVDVVVHSATKYIGGHGDVVAGLICGKA------ELLQQIRMVGIKDMTGSVISPFDAWL--ILRGL--KTLNIR 259 (391)
T ss_pred CchhcCCCEEEccccccccCCCCceEEEEEcCH------HHHHHHHHHHHHhCCCCCCCcHHHHH--HHhCc--CcHHHH
Confidence 2343 79999999999997643 68888776 66665543211111222121122222 23322 234567
Q ss_pred HHHHHHHHHHHHHHHHh-cCcE
Q 009673 376 QNKVVSNCRALASRLVE-LGYK 396 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~-~G~~ 396 (529)
+++..+|++.+.+.|++ +++.
T Consensus 260 ~~~~~~na~~la~~L~~~p~v~ 281 (391)
T TIGR01328 260 MKRHSENAMKVAEYLKSHPAVE 281 (391)
T ss_pred HHHHHHHHHHHHHHHHhCCCcc
Confidence 88889999999999988 4443
No 192
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=5e-19 Score=182.11 Aligned_cols=306 Identities=17% Similarity=0.127 Sum_probs=198.8
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.|+|..++|+ +|+.+++++.+.+......+||. .| ..+++ +.+++++|++++ +|.+++|+ +
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----~g---~~~lr----~~ia~~~~~~~~----~I~~t~G~~~ 83 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPH----IT---SDPLR----EAIAEFYGLDAE----NIAVGNGSDE 83 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCC----CC---HHHHH----HHHHHHhCcCcc----eEEEcCCHHH
Confidence 45788777765 57889999887664221123432 11 23333 667788888875 56678988 7
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
++..++.++ +||+|++++|.|+.+. ......|. ++++++++ +++.+|++.+++.+ . +++++++++
T Consensus 84 ~l~~~~~~~--~gd~V~v~~P~y~~~~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~-~-~~~~v~~~~ 148 (337)
T PRK03967 84 LISYLVKLF--EGKHIVITPPTFGMYS--------FYAKLNGI--PVIDVPLK-EDFTIDGERIAEKA-K-NASAVFICS 148 (337)
T ss_pred HHHHHHHHh--CCCeEEEeCCChHHHH--------HHHHHcCC--eEEEeecC-CCCCcCHHHHHHhc-c-CCCEEEEeC
Confidence 777666655 8999999999775321 12234454 66677666 35789999998865 3 688998889
Q ss_pred CCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-c-ccEEEecccccc--cCCCCeEEEeeCCCcch
Q 009673 260 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 333 (529)
Q Consensus 260 s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~-aDiv~~S~hK~l--~GprgG~i~~~~~~~~~ 333 (529)
|+||+ ..+.++|.++++ +|+++|+|+++. .+.... ....+. . --+++.|++|++ +|.|.||+++++
T Consensus 149 P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~-~~~~~~-~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~----- 220 (337)
T PRK03967 149 PNNPTGNLQPEEEILKVLE-TGKPVVLDEAYA-EFSGKS-LIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANE----- 220 (337)
T ss_pred CCCCCCCCCCHHHHHHHHh-cCCEEEEECchh-hhcccc-hHHHHhhCCCEEEEecchHhhcchhhhheeeecCH-----
Confidence 99997 778899999995 799999999854 332111 000011 1 127889999986 789999999987
Q ss_pred hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCC
Q 009673 334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (529)
Q Consensus 334 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~ 413 (529)
++.+.+.....+. +. +.....++..+++. .+.+.+..+.+.++++.+.+.|.+.. .. ....++|+++.
T Consensus 221 -~~i~~~~~~~~~~--~~-~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~---~~--~~~~~~~~~~~- 288 (337)
T PRK03967 221 -EIIDALYRIKPPF--SL-NILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEYA---YP--SDANFLLLKLD- 288 (337)
T ss_pred -HHHHHHHhhcCCC--CC-CHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccCc---CC--CCCcEEEEhHH-
Confidence 6777776544332 22 22222233334432 12335556667777888888886542 22 23456666542
Q ss_pred CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 414 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 414 ~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+.+.|.++||.+... ++ ..++++||++. +.++.+++.+.|.++..
T Consensus 289 -------~~~~l~~~gi~v~~~--~~----~~~~~~Ri~~~-------~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 289 -------AYDYLLENGIVVRKL--SG----RLEGHIRVTVG-------KREENDEFIKALKEIKE 333 (337)
T ss_pred -------HHHHHHHCCEEEEeC--CC----CCCCeEEEecC-------CHHHHHHHHHHHHHHHH
Confidence 556677789999642 21 23568999864 36888999999887654
No 193
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.84 E-value=1.1e-18 Score=172.32 Aligned_cols=335 Identities=17% Similarity=0.198 Sum_probs=235.2
Q ss_pred eeEecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 009673 105 LELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (529)
Q Consensus 105 i~L~asen~~----~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~ 179 (529)
+...-|+.|+ .|.|++|+...+ ++|..|..|.|...|+ .+.-++| +.++++.+-+.+ +..+|..-
T Consensus 173 VtVWCSNDYLgms~Hp~V~~A~~~tl-~~hG~GAGGTRNIsG~s~~hv~LE----~eLA~LHqK~aA-----LlFsSCfV 242 (570)
T KOG1360|consen 173 VTVWCSNDYLGMSRHPEVLDAMHDTL-DRHGAGAGGTRNISGHSKHHVRLE----AELADLHQKEAA-----LLFSSCFV 242 (570)
T ss_pred eEEEecCccccccCChHHHHHHHHHH-HHcCCCcCCccccCCCCchhhhHH----HHHHHHhcCcce-----eeeeeeee
Confidence 4444566664 699999999887 5777788888877665 4455677 567888887763 34577778
Q ss_pred HHHHHHHhhc--CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc---CCcE
Q 009673 180 ANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKL 254 (529)
Q Consensus 180 A~~~~l~all--~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~---~pkl 254 (529)
||...+..|. -||-+|......|.+.+- .++-++. .-+.+ ..-|+++|++++... .||+
T Consensus 243 ANDstLftLak~lpgcei~SD~gNHASMI~--------GIrns~v--~K~IF------rHND~~hL~~lL~~~~~svPKi 306 (570)
T KOG1360|consen 243 ANDSTLFTLAKKLPGCEIFSDEGNHASMIQ--------GIRNSRV--PKHIF------RHNDLDHLEQLLQSSPKSVPKI 306 (570)
T ss_pred ccchHHHHHHHHCCCcEEeccccchHHHHH--------HhhhcCC--cceee------ccCCHHHHHHHHHhCCCCCCce
Confidence 9998888874 489999877655543321 1222221 11111 145888888888753 5788
Q ss_pred EEEc--CCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccc---cc--cCCCCCcccEEEecccccccCCCCeEEEee
Q 009673 255 IIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SV--VADPFKYCDVVTTTTHKSLRGPRGGMIFFK 327 (529)
Q Consensus 255 Ii~~--~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~---~~--~~~~~~~aDiv~~S~hK~l~GprgG~i~~~ 327 (529)
|.+. +|..+.+.|+++|+++|++||++.++|+.|+.|+... |+ .+..+...||+++++-|+| |--||+|...
T Consensus 307 vAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKaf-GcVGGYIAat 385 (570)
T KOG1360|consen 307 VAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAF-GCVGGYIAAT 385 (570)
T ss_pred EEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhc-ccccceehhh
Confidence 8876 4556669999999999999999999999999998743 22 2222336899999999998 7889999998
Q ss_pred CCCcchhHHHhhhcccccCCCCC-CChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673 328 KDPVLGVELESAINNAVFPGLQG-GPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 406 (529)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~p~~~g-~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~ 406 (529)
. ++.+.++...-.++.. +.....+++.-.+.+.+...+....+++.++|.+++++.|.+.|++++. ..+|+
T Consensus 386 ~------~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~--~pSHI 457 (570)
T KOG1360|consen 386 R------KLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIP--NPSHI 457 (570)
T ss_pred h------hHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCcccC--CCcce
Confidence 8 7888887654332222 2223344444446666666666778888899999999999999999987 35788
Q ss_pred EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 407 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 407 ~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
+.+.+.....+.+....++.++||.|-..-+| +.+.+...+||.-. -+++++-|+.+.+.+..+++..
T Consensus 458 iPv~vgda~l~~~~sd~Li~~h~iYvQaINyP--TV~rG~E~LRiaPT----P~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 458 IPVRVGDAALAKQASDILISKHNIYVQAINYP--TVARGTERLRIAPT----PHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred eeeeccCHHHHHHHHHHHHHhcCeEEEeccCC--cccccceeeecCCC----CCCCHHHHHHHHHHHHHHHHHc
Confidence 77766543333344556678899998653233 23455678999532 3467899999999999888754
No 194
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=5.2e-19 Score=185.04 Aligned_cols=215 Identities=24% Similarity=0.246 Sum_probs=151.1
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
++...++| +.+++++|.+.. +.++||++|+.+++.++++|||+|+++++.|++.+.... ......|
T Consensus 60 ~p~~~~Le----~~lA~~~g~~~~-----i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~----~~~~~~g- 125 (388)
T PRK07811 60 NPTRTALE----EQLAALEGGAYG-----RAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLID----KVFTRWG- 125 (388)
T ss_pred CccHHHHH----HHHHHHhCCCce-----EEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHH----HhCcCCC-
Confidence 34466777 678899999863 445899999999999999999999999998875432110 0111123
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~ 300 (529)
.++..++ ..|++++++.+++ ++|+|+++.|+||+ ..|+++|+++|+++|++||+|+++..+.. ..
T Consensus 126 -i~~~~~d------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~-----~~ 192 (388)
T PRK07811 126 -VEYTPVD------LSDLDAVRAAITP-RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYL-----QQ 192 (388)
T ss_pred -eEEEEeC------CCCHHHHHHhcCc-CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCcccc-----CC
Confidence 2444433 2589999999987 89999999998886 78999999999999999999999766533 23
Q ss_pred CCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccC-CCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 301 PFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 301 ~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p-~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
++. ++|++++|++|++.||. +|+++++++ ++.+++...... +...+| ..+ +.++..+ ..+..+
T Consensus 193 p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~-----~l~~~~~~~~~~~g~~~s~----~~a-~l~~~~L--~tl~~R 260 (388)
T PRK07811 193 PLALGADVVVHSTTKYIGGHSDVVGGALVTNDE-----ELDEAFAFLQNGAGAVPGP----FDA-YLTLRGL--KTLAVR 260 (388)
T ss_pred chhhCCcEEEecCceeecCCCCcEEEEEEECCH-----HHHHHHHHHHHhcCCCCCH----HHH-HHHHhcc--CcHHHH
Confidence 444 78999999999998873 699888764 565554432111 111111 111 1223322 235667
Q ss_pred HHHHHHHHHHHHHHHHh-cCcE
Q 009673 376 QNKVVSNCRALASRLVE-LGYK 396 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~-~G~~ 396 (529)
.++..+|+..+.+.|++ .++.
T Consensus 261 ~~~~~~na~~la~~L~~~p~v~ 282 (388)
T PRK07811 261 MDRHSENAEAVAEFLAGHPEVS 282 (388)
T ss_pred HHHHHHHHHHHHHHHHhCCCee
Confidence 78889999999999987 4554
No 195
>PLN02368 alanine transaminase
Probab=99.84 E-value=2.3e-19 Score=188.45 Aligned_cols=245 Identities=11% Similarity=0.040 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhc-CCCCEEEEcCCCCCccccccccccccccccccce
Q 009673 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 223 (529)
Q Consensus 146 ~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all-~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~ 223 (529)
..++.+.+.+++.+.+|++.+. -+|.+|+|+ +++..++.+++ +|||+|++++|.|..+. ..+...|.
T Consensus 109 ~~~LR~aia~~~~~~~g~~~~~--~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~--------~~~~~~g~- 177 (407)
T PLN02368 109 LPGVRKEVAEFIERRDGYPSDP--ELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYS--------ATISLLGG- 177 (407)
T ss_pred CHHHHHHHHHHHHHhcCCCCCh--hhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHH--------HHHHHcCC-
Confidence 3466666668888877864321 267779998 89999999987 79999999999776442 23445565
Q ss_pred EEEEEcccCCC-CCCCCHHHHHHHhhhc-----CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccc
Q 009673 224 FESMPYRLDES-TGLVDYDMLEKTAILF-----RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGL 292 (529)
Q Consensus 224 ~~~v~~~v~~~-~~~iD~d~le~~i~~~-----~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gl 292 (529)
++++++++++ ++.+|++++++.+++. ++|++++++|+||+ .. .+++|.++|++||++||+|++ |..+
T Consensus 178 -~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~-Y~~l 255 (407)
T PLN02368 178 -TLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEV-YQQN 255 (407)
T ss_pred -EEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcc-cccc
Confidence 6777777643 4789999999998742 68988998899997 33 567788889999999999998 5555
Q ss_pred ccccc--cCCC------C----C-c-ccEEEecccccc---cCCCCeEEEe---eCCCcchhHHHhhhcccccCCCCCCC
Q 009673 293 VAASV--VADP------F----K-Y-CDVVTTTTHKSL---RGPRGGMIFF---KKDPVLGVELESAINNAVFPGLQGGP 352 (529)
Q Consensus 293 i~~~~--~~~~------~----~-~-aDiv~~S~hK~l---~GprgG~i~~---~~~~~~~~~l~~~i~~~~~p~~~g~p 352 (529)
++.+. +.+. + . + --|++.|+||++ +|+|.||+++ ++ ++.+.+.+.... ..+.+
T Consensus 256 ~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~------~li~~~~~~~~~-~~~~~ 328 (407)
T PLN02368 256 IYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPP------KTVEEIYKVASI-ALSPN 328 (407)
T ss_pred ccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCH------HHHHHHHHHhcc-cCCCC
Confidence 54432 1110 0 0 1 127779999985 6999999985 44 566666553211 12333
Q ss_pred hHHHHHHHHHHHHHhc--Cc---hH----HHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEccC
Q 009673 353 HNHTIGGLAVCLKHAQ--SP---EF----KVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR 412 (529)
Q Consensus 353 ~~~~iaala~al~~~~--~~---~~----~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~ 412 (529)
...+.++ ..+|+.-. .. .+ +++.+.+.++++.+.+.|++. |+.+..+ ..++++|.++.
T Consensus 329 ~~~Q~aa-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P-~Gafy~~~~i~ 396 (407)
T PLN02368 329 VSGQIFM-GLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFT-EGAMYSFPQIK 396 (407)
T ss_pred cHHHHHH-HHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCC-CeeeEeccCCC
Confidence 3444443 33453210 00 12 345677888999999999984 8877654 23566676664
No 196
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.83 E-value=4.4e-19 Score=175.68 Aligned_cols=320 Identities=18% Similarity=0.202 Sum_probs=201.8
Q ss_pred cCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH
Q 009673 109 ASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (529)
Q Consensus 109 asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~ 186 (529)
.|+|. ..|+++|+|...-. .+..-||..++...+| ++++++||... .+.+.|||.||..++.
T Consensus 5 ~SDn~~g~~~~m~eam~~a~~-------~~~~~YG~D~~~~~~e----~~~ae~~g~~a-----~~Fv~sGT~aN~lal~ 68 (342)
T COG2008 5 RSDNVAGPTPEMREALAAANA-------VGDDVYGEDPTTNALE----QRIAELFGKEA-----ALFVPSGTQANQLALA 68 (342)
T ss_pred ccCccCCCCHHHHHHHHhccc-------cCCCCCCCCHHHHHHH----HHHHHHhCCce-----EEEecCccHHHHHHHH
Confidence 46665 57999999975421 1223477777778777 78899999843 3556999999999999
Q ss_pred hhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhh----c--CCcEEEEcC
Q 009673 187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAIL----F--RPKLIIAGA 259 (529)
Q Consensus 187 all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~----~--~pklIi~~~ 259 (529)
+.++||+.|++-.-.|- |......+.+.+ ...++++.+ .++.+++|+|++.+.. + +|.+++.+.
T Consensus 69 ~~~~~~~~vi~~~~aHi------~~~E~Ga~~~~~---~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~ 139 (342)
T COG2008 69 AHCQPGESVICHETAHI------YTDECGAPEFFG---GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENT 139 (342)
T ss_pred HhcCCCCeEEEeccccc------eecccCcHHHHc---CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeec
Confidence 99999999998775442 211112333333 223333443 5689999999998763 1 345566664
Q ss_pred CC-CCCCC---CHHHHHHHHHHhCCEEEEecccccccc-cccccCCCC-CcccEEEecccccccCCCCeEEEeeCCCcch
Q 009673 260 SA-YPRDF---DYPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLG 333 (529)
Q Consensus 260 s~-~p~~~---d~~~i~~ia~~~g~~livD~ah~~Gli-~~~~~~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~ 333 (529)
++ .++.. .+++|+++||++|+.|+.|+|...... ..+...... .++|+++++++|.++.|-+.+++++.
T Consensus 140 ~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~----- 214 (342)
T COG2008 140 ATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNR----- 214 (342)
T ss_pred cCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCH-----
Confidence 43 34444 467788899999999999998654432 223111112 28999999999998777778888887
Q ss_pred hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEEEcc
Q 009673 334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDL 411 (529)
Q Consensus 334 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~ 411 (529)
++.++.+...-.. |+ .+.+.--++++.....+.. |.....+-.+.++.|.+.|.+ +|+++..+ .+++++++++
T Consensus 215 -~~~~~a~~~rK~~--Gg-l~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~-~~tN~vf~~l 289 (342)
T COG2008 215 -DFAKRARRWRKRA--GG-LMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFP-VETNMVFVRL 289 (342)
T ss_pred -HHHHHHHHHHHHh--cc-cHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccC-CcccEEEEEC
Confidence 7777654332111 11 1112111222222222233 333333333338999999985 69999887 5678888887
Q ss_pred CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 412 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 412 ~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
+...++.......+...|+.++.. ..-+|+-++ +..+++|+++++..++.++
T Consensus 290 ~~~~i~~l~~~~~~~~~~~~~~~~----------~~~vRfvts----~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 290 PESAIEALRLAGALFYRGVLIGAH----------GEIVRFVTS----WATSEEDVDELVAAIKALL 341 (342)
T ss_pred ChHHHHHHHhhchhheeeeeccCC----------CceEEEEee----ccCCHHHHHHHHHHHHHhh
Confidence 643333333344445555554210 035898654 4456899999999887653
No 197
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.83 E-value=5.1e-19 Score=185.88 Aligned_cols=291 Identities=16% Similarity=0.199 Sum_probs=187.1
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
++...++| +.+++++|.+. .+.+.||+.|+..++.++++|||+|+++++.|++.+... ...+...|.
T Consensus 63 ~p~~~~Le----~~iA~~~g~~~-----~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~----~~~~~~~G~ 129 (400)
T PRK06234 63 NPTSTEVE----NKLALLEGGEA-----AVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALL----NHGLTRYGV 129 (400)
T ss_pred CccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHH----HHHHhhCCe
Confidence 34566777 67888899763 356789999999999999999999999998776543211 011233454
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHh--CCEEEEeccccccccccccc
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVV 298 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~ 298 (529)
+++.++. .|++++++.+++ ++|+|++++|+||+ ..|+++|.++|+++ |+++++|+++..+..
T Consensus 130 --~v~~vd~------~d~e~l~~~i~~-~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~----- 195 (400)
T PRK06234 130 --EVTFVDT------SNLEEVRNALKA-NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYI----- 195 (400)
T ss_pred --EEEEECC------CCHHHHHHHhcc-CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhc-----
Confidence 5656543 379999999987 89999999999887 78999999999997 999999999766533
Q ss_pred CCCCC-cccEEEecccccccCC--C-CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673 299 ADPFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (529)
Q Consensus 299 ~~~~~-~aDiv~~S~hK~l~Gp--r-gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (529)
..++. ++|++++|++|++.|+ + +|++++++ ++.+++.........|.......+++ .+..+ ..+..
T Consensus 196 ~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~------~~~~~l~~~~~~~~~g~~l~p~~a~l--~~~~l--~tl~~ 265 (400)
T PRK06234 196 QRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKE------EFINQVKLFGIKDMTGSVIGPFEAFL--IIRGM--KTLQI 265 (400)
T ss_pred CCchhhCCcEEEeeccccccCCCCceeEEEEecH------HHHHHHHHHHHHHhcCCCCCHHHHHH--HHhcc--CcHHH
Confidence 13333 6899999999999764 3 59999987 56665543211111122111122222 23322 23456
Q ss_pred HHHHHHHHHHHHHHHHHhc-CcE-EecCC---------------CCCceEEEccCCCCC-cHHHHHHhHhcCCeEEcCCC
Q 009673 375 YQNKVVSNCRALASRLVEL-GYK-LVSGG---------------SDNHLVLVDLRPMGI-DGARVEKILDMASITLNKNS 436 (529)
Q Consensus 375 ~~~~i~~~a~~l~~~L~~~-G~~-v~~~g---------------t~~~~~~v~~~~~~i-~~~~~~~~L~~~GI~v~~~~ 436 (529)
++++..+|+..+.+.|.+. .+. +..++ ..++++.+++.. +. ....+.+.|+-.++.++.+.
T Consensus 266 r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~-~~~~~~~f~~~l~~~~~~~s~G~ 344 (400)
T PRK06234 266 RMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKG-GVEEGKVVMNNVKLATLAVSLGD 344 (400)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecC-cHHHHHHHHHhCCcceEeccCCC
Confidence 7788889999999999873 332 22221 123345555532 11 12345556666666665432
Q ss_pred ------CCCCCC------------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 437 ------VPGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 437 ------~Pg~~~------------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
.|...+ ...++-||+++. -||.+.+.+-|.+++..
T Consensus 345 ~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG--------lE~~~dl~~dl~~al~~ 397 (400)
T PRK06234 345 AETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVG--------LEDVDDIIADLKQALDL 397 (400)
T ss_pred CCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeC--------CCCHHHHHHHHHHHHHH
Confidence 132110 012356899864 26777777777777763
No 198
>PRK04311 selenocysteine synthase; Provisional
Probab=99.83 E-value=2.4e-18 Score=182.37 Aligned_cols=322 Identities=17% Similarity=0.168 Sum_probs=200.5
Q ss_pred CCCCCcHHHHHHHhhhhhccCCC-CCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh
Q 009673 110 SENFTSRAVMEAVGSCLTNKYSE-GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (529)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~-G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al 188 (529)
+-.++|+++++++...+.+ |.. .|--.....| +..+.+| +.+++++|.+. + +.++||+.|+..++.+
T Consensus 94 g~s~l~~~v~eav~~~~~~-~~~le~~l~~g~~g-~r~~~~e----~~lA~l~Gae~----a-~vv~sgtaAl~l~l~~- 161 (464)
T PRK04311 94 GRALLSEAAIEAVTEAARG-YSNLEYDLATGKRG-SRDRALA----ALLCALTGAED----A-LVVNNNAAAVLLALNA- 161 (464)
T ss_pred CCCCCCHHHHHHHHHHHhc-ccccccchhhcccc-hHHHHHH----HHHHHHhCCCe----E-EEECCHHHHHHHHHHH-
Confidence 4457899999999877653 321 1100000112 2234444 78899999985 2 4468899999888765
Q ss_pred cCCCCEEEEcCCCCC---ccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--
Q 009673 189 LKPHDRIMGLDLPHG---GHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP-- 263 (529)
Q Consensus 189 l~pGD~Vl~~~~~~~---g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p-- 263 (529)
+.+||+|++.+.++. +.+... ..+...|. +++.++.+ ...+++++++++++ +|++|++.+++|+
T Consensus 162 l~~GdeVIvs~~e~~~~ggs~~i~-----~~~~~~G~--~l~~v~~~---~~t~~~dle~aI~~-~TklV~~vh~sN~~i 230 (464)
T PRK04311 162 LAAGKEVIVSRGELVEIGGAFRIP-----DVMRQAGA--RLVEVGTT---NRTHLRDYEQAINE-NTALLLKVHTSNYRI 230 (464)
T ss_pred hCCCCEEEEcchhhhhcCcchhhH-----HHHHHCCc--EEEEECCC---CCCCHHHHHHhcCc-cCeEEEEEcCCCccc
Confidence 589999999876442 221110 11233454 66666543 34679999999987 8999888766554
Q ss_pred ----CCCCHHHHHHHHHHhCCEEEEeccccccccc----cc--ccC---CCCC-cccEEEecccccccCCCCeEEEeeCC
Q 009673 264 ----RDFDYPRMRQIADAVGALLMMDMAHISGLVA----AS--VVA---DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (529)
Q Consensus 264 ----~~~d~~~i~~ia~~~g~~livD~ah~~Gli~----~~--~~~---~~~~-~aDiv~~S~hK~l~GprgG~i~~~~~ 329 (529)
...|+++|+++|++||+++++|.+ +|.+. .+ ..+ .++. ++|++++|+||++.||.+|++++++
T Consensus 231 ~G~~~~~dl~eI~~lak~~gi~vivD~g--sG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~- 307 (464)
T PRK04311 231 EGFTKEVSLAELAALGKEHGLPVVYDLG--SGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKK- 307 (464)
T ss_pred cccCCcCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcH-
Confidence 257999999999999999999985 33321 11 111 2233 7999999999999999999999987
Q ss_pred CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCch-----------HHHHHHHHHHHHHHHHHHHHhc---Cc
Q 009673 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-----------FKVYQNKVVSNCRALASRLVEL---GY 395 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-----------~~~~~~~i~~~a~~l~~~L~~~---G~ 395 (529)
++.+++.+....-.. ...-..++++...+.....+. +....++..+++..+.+.|.+. ++
T Consensus 308 -----~li~~l~~~~~~r~l-r~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~ 381 (464)
T PRK04311 308 -----ELIARLKKHPLKRAL-RVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAF 381 (464)
T ss_pred -----HHHHHHhhchhHHHH-hcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCe
Confidence 677666531100000 001124555555555332211 1123367778999999999874 22
Q ss_pred --EEec------CCCCC----ceEEEccCCCCCcHHHHHHhHhcCC--eEEcCCCCCCCCCCCCCCeEEEccCCCccCCC
Q 009673 396 --KLVS------GGSDN----HLVLVDLRPMGIDGARVEKILDMAS--ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF 461 (529)
Q Consensus 396 --~v~~------~gt~~----~~~~v~~~~~~i~~~~~~~~L~~~G--I~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~ 461 (529)
.+.. +|+.. .-.-+.+.+.+.+...+++.|++.. |.... ..+.+.+- -|.+
T Consensus 382 ~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~----------~~~~~~ld-----~r~~ 446 (464)
T PRK04311 382 AVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGRI----------EDGRLLLD-----LRTL 446 (464)
T ss_pred eEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEEE----------ECCEEEEE-----eCcC
Confidence 3432 22221 1223445555667888999998744 44421 23445543 2557
Q ss_pred CHHHHHHHHHHHHHHHH
Q 009673 462 SEKEFVAIADFIHEGVE 478 (529)
Q Consensus 462 ~~~d~~~la~~i~~~~~ 478 (529)
.++|++.+++.+.+++.
T Consensus 447 ~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 447 EEEDEERLAAALLEALN 463 (464)
T ss_pred CHHHHHHHHHHHHHHhh
Confidence 79999999999988753
No 199
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.83 E-value=4.6e-19 Score=186.01 Aligned_cols=216 Identities=20% Similarity=0.192 Sum_probs=148.3
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
++..+++| +.+++++|++.. . .+.||+.|+..++.++++|||+|+++++.|+++..... ......|
T Consensus 64 ~p~~~~Le----~~lA~l~G~~~~----~-~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~----~~~~~~G- 129 (398)
T PRK07504 64 NPTVDMFE----KRMCALEGAEDA----R-ATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVE----TLLPRYG- 129 (398)
T ss_pred CchHHHHH----HHHHHHhCCCee----e-EecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHH----HHHhhcC-
Confidence 45566777 678899999873 2 35799999988888899999999999988776532110 0011223
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~ 300 (529)
.++..++ .+|++++++++++ ++|+|++++|+||+ ..|+++|.++|+++|+++++|++|..+.. ..
T Consensus 130 -~~v~~vd------~~d~e~l~~ai~~-~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~-----~~ 196 (398)
T PRK07504 130 -IESTLVD------GLDLDNWEKAVRP-NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLF-----QK 196 (398)
T ss_pred -eEEEEEC------CCCHHHHHHhcCc-CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCcccccc-----CC
Confidence 3554532 3789999999987 89999999999986 78999999999999999999999876643 23
Q ss_pred CCC-cccEEEecccccccC--CC-CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHH
Q 009673 301 PFK-YCDVVTTTTHKSLRG--PR-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (529)
Q Consensus 301 ~~~-~aDiv~~S~hK~l~G--pr-gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~ 376 (529)
++. ++|++++|+||++.| ++ ||+++++++ .+.+++..... ..|.......++ .++..+ ..+..+.
T Consensus 197 ~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~-----~i~~~~~~~~~--~~g~~~s~~~A~--~~l~~L--~tl~~R~ 265 (398)
T PRK07504 197 PLELGAHIVVYSATKHIDGQGRCLGGVVLSDKA-----WIEEHLQDYFR--HTGPSLSPFNAW--TLLKGL--ETLPVRV 265 (398)
T ss_pred chhhCCCEEEeeccccccCCccceEEEEEeCcH-----HHHHHHHHHHH--HhCCCCCHHHHH--HHHhcc--chHHHHH
Confidence 444 789999999999965 34 478887763 22222322110 012111112222 223332 2356778
Q ss_pred HHHHHHHHHHHHHHHh-cCcE
Q 009673 377 NKVVSNCRALASRLVE-LGYK 396 (529)
Q Consensus 377 ~~i~~~a~~l~~~L~~-~G~~ 396 (529)
++..+|+..+.+.|.+ .++.
T Consensus 266 ~~~~~na~~la~~L~~~p~v~ 286 (398)
T PRK07504 266 RQQTESAAAIADFLAGHPKVA 286 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCcc
Confidence 8888999999999987 3443
No 200
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.83 E-value=4.7e-20 Score=190.45 Aligned_cols=265 Identities=19% Similarity=0.255 Sum_probs=176.6
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (529)
Q Consensus 153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v 231 (529)
+++.++++||++... ..++|| .+|.++++++++|||+||+....|-+.+. .+.+.|+ .+++++.
T Consensus 71 Ae~~aA~~fGAd~t~-----flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~--------alil~ga--~Pvyi~p 135 (417)
T PF01276_consen 71 AEELAARAFGADKTF-----FLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYN--------ALILSGA--IPVYIPP 135 (417)
T ss_dssp HHHHHHHHHTESEEE-----EESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHH--------HHHHHTE--EEEEEEE
T ss_pred HHHHHHHhcCCCeEE-----EEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHH--------HHHHcCC--eEEEecC
Confidence 447889999999853 247888 99999999999999999999877655431 3445665 5555443
Q ss_pred C-CCC---CCCCH-----HHHHHHhhhcC----CcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccc
Q 009673 232 D-EST---GLVDY-----DMLEKTAILFR----PKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASV 297 (529)
Q Consensus 232 ~-~~~---~~iD~-----d~le~~i~~~~----pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~ 297 (529)
. .+. +.+++ +.|+++++++. ++++++.+|+|-+ ..|+++|.++|+++|++|++|+||++.+.+.+.
T Consensus 136 ~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~l 215 (417)
T PF01276_consen 136 EDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPL 215 (417)
T ss_dssp EE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGG
T ss_pred CccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCC
Confidence 2 121 24566 99999998732 3448888888877 779999999999999999999999877665543
Q ss_pred cCCCCC-ccc-------EEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc
Q 009673 298 VADPFK-YCD-------VVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ 368 (529)
Q Consensus 298 ~~~~~~-~aD-------iv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~ 368 (529)
..+.+. ++| +++.|+||++++... ++|..+.+... -.++++....-....+|++..+|++..|.+++.
T Consensus 216 p~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v---~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~ 292 (417)
T PF01276_consen 216 PRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIV---DHERVNEALSMHQTTSPSYPLMASLDVARAQME 292 (417)
T ss_dssp GTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCT---THHHHHHHHHHHS-SS--HHHHHHHHHHHHHHS
T ss_pred ccchhhccCccccccceeeeechhhcccccccceEEEecCCCcc---cHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHh
Confidence 333344 789 999999999998876 88888875200 123444432222356889999999999888773
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHh----cCcEEecCC----C------------------------CCceEEEcc-----
Q 009673 369 SPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGG----S------------------------DNHLVLVDL----- 411 (529)
Q Consensus 369 ~~~~~~~~~~i~~~a~~l~~~L~~----~G~~v~~~g----t------------------------~~~~~~v~~----- 411 (529)
..+.++..++..++++.+++.|++ .++.++.+. . |.--+.+.+
T Consensus 293 ~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ti~~pG~~~ 372 (417)
T PF01276_consen 293 EEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKLTINTPGIDA 372 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTEEEEE-STBET
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCccccCCcEEEEEccCcCc
Confidence 345578888889999999999943 466665421 0 111123333
Q ss_pred ----CCCCCcHHHHHHhHhcCCeEEcCC
Q 009673 412 ----RPMGIDGARVEKILDMASITLNKN 435 (529)
Q Consensus 412 ----~~~~i~~~~~~~~L~~~GI~v~~~ 435 (529)
...|+++..+.+.|+++||.+.+.
T Consensus 373 ~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~ 400 (417)
T PF01276_consen 373 DGELSELGIPGYIVEKYLREHGIQVEKT 400 (417)
T ss_dssp TSSB-SS---HHHHHHHHHHTTEE-SEE
T ss_pred CCcccccCCCHHHHHHHHHHcCCEEEec
Confidence 456788999999999999999763
No 201
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.83 E-value=2.5e-18 Score=195.32 Aligned_cols=302 Identities=19% Similarity=0.179 Sum_probs=202.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh----cCCCC----EEEEcCCCCCcccccccccccccccc
Q 009673 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----LKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSG 219 (529)
Q Consensus 148 ~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al----l~pGD----~Vl~~~~~~~g~~s~g~~~~~~~i~~ 219 (529)
+++...++++++++|.+. +.+++.+|+.|+++.++++ .++|| +|++++..|+++.. .+.+
T Consensus 542 ~~i~e~q~~l~eltG~d~----~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~--------sa~~ 609 (954)
T PRK05367 542 ELIDQLEAWLAEITGYDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPA--------SAVM 609 (954)
T ss_pred HHHHHHHHHHHHHHCCCC----EEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHH--------HHHH
Confidence 444456699999999985 5677777878886665554 25776 58888877766532 2334
Q ss_pred ccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccc
Q 009673 220 TSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA 295 (529)
Q Consensus 220 ~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~ 295 (529)
.|. +++.++++ +++.+|+++|++.++++ ++.+|++.++++.+ ..|+++|+++|+++|+++++|+||..+++..
T Consensus 610 ~G~--~vv~v~~d-~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l 686 (954)
T PRK05367 610 AGM--KVVVVACD-ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGL 686 (954)
T ss_pred CCC--EEEEECCC-CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCC
Confidence 454 77777776 46899999999999764 45667677666555 3689999999999999999999997665532
Q ss_pred cccCCCCC-cccEEEecccccccCCCC------eEEEeeCCCcchhHHHhhhccc-----ccCCCCCCChHH----HHHH
Q 009673 296 SVVADPFK-YCDVVTTTTHKSLRGPRG------GMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNH----TIGG 359 (529)
Q Consensus 296 ~~~~~~~~-~aDiv~~S~hK~l~Gprg------G~i~~~~~~~~~~~l~~~i~~~-----~~p~~~g~p~~~----~iaa 359 (529)
. .|.. ++|++++++||||++|.| |++++++. +...+... ......|..... ...+
T Consensus 687 ~---~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~------l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~ 757 (954)
T PRK05367 687 A---RPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH------LAPFLPGHPVQIAGGETGIGAVSAAPFGSASIL 757 (954)
T ss_pred C---ChhhcCCCEEEecCcccCCCCcCCCCCceEEEeeccc------ccccCCCCccCcCCCCCCcCcchhHHHHHHHHH
Confidence 1 2323 799999999999865553 58888762 33222111 011111111111 1111
Q ss_pred --HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC---CCCCceEEEccCCC----CCcHHHHHHhHhcCCe
Q 009673 360 --LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG---GSDNHLVLVDLRPM----GIDGARVEKILDMASI 430 (529)
Q Consensus 360 --la~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~---gt~~~~~~v~~~~~----~i~~~~~~~~L~~~GI 430 (529)
.+..+..+..+++++..++...+++++.+.|.+ ++++... +...|-+++++++. +++..++.+.|.++||
T Consensus 758 ~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~-~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~ 836 (954)
T PRK05367 758 PISWMYIRMMGAEGLRQATEVAILNANYIAKRLKD-HYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGF 836 (954)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-hcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCC
Confidence 112244455566788888888999999999977 3554332 22345567777421 4566889999999999
Q ss_pred EEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 009673 431 TLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAK 484 (529)
Q Consensus 431 ~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~~ 484 (529)
.....+.| .++.+||.....+ +++|++++++++..+.....++.
T Consensus 837 ~~~t~~~p------v~~~l~i~ptE~~----s~~elDr~~~al~~i~~e~~~~~ 880 (954)
T PRK05367 837 HAPTMSFP------VAGTLMVEPTESE----SKAELDRFCDAMIAIRAEIDEVE 880 (954)
T ss_pred eEeecCCc------cCCEEEEEeeecC----CHHHHHHHHHHHHHHHHHHHHhh
Confidence 87542223 3578999876654 48999999999988887665543
No 202
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.83 E-value=7.8e-19 Score=180.12 Aligned_cols=262 Identities=17% Similarity=0.174 Sum_probs=171.4
Q ss_pred HHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC
Q 009673 155 KRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (529)
Q Consensus 155 ~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~ 233 (529)
+.+++.+|.+ +|.+++|+ +++..++ .+.|||+|++++|.|..+. ..+...|. +++.+++
T Consensus 56 ~~ia~~~~~~------~I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~--------~~~~~~g~--~~~~v~~-- 115 (330)
T PRK05664 56 AAARAYYGAP------QLLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHA--------HAWRRAGH--QVRELDE-- 115 (330)
T ss_pred HHHHHHhCCC------CEEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHH--------HHHHHcCC--eEEEech--
Confidence 5677778863 46679998 7877654 4689999999999775442 23344565 6666543
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC-ccc-
Q 009673 234 STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD- 306 (529)
Q Consensus 234 ~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aD- 306 (529)
+++++.+. +++++++++|+||+ ..+ +++|.++|+++|++||+|+++. ........ ..+. +..
T Consensus 116 -------~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~-~~~~~~s~-~~~~~~~~v 184 (330)
T PRK05664 116 -------AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFM-DNTPQHSL-AACAHRPGL 184 (330)
T ss_pred -------hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcc-cCCCcccc-cccccCCCE
Confidence 24555553 67888888899997 444 5666677789999999999853 32211000 0111 112
Q ss_pred EEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (529)
Q Consensus 307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~ 384 (529)
+++.|++|++ +|+|.||+++++ ++.+.+.....+... ....+. +...+|.. ....+..++++.++++
T Consensus 185 i~~~SfSK~~gl~GlRiG~~v~~~------~l~~~~~~~~~~~~~--~~~~~~-~~~~~L~~--~~~~~~~~~~~~~~r~ 253 (330)
T PRK05664 185 IVLRSFGKFFGLAGARLGFVLAEP------ALLRALAELLGPWTV--SGPTRW-LAQAALAD--TPWQRRQRERLLAASQ 253 (330)
T ss_pred EEEeeccccccCCCcceEEEEeCH------HHHHHHHHhcCCCCC--CHHHHH-HHHHHHhC--hHHHHHHHHHHHHHHH
Confidence 7889999986 799999999987 677777654333221 122222 22334432 1223566778888899
Q ss_pred HHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHH
Q 009673 385 ALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK 464 (529)
Q Consensus 385 ~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~ 464 (529)
.+.+.|++.|+... + +...++|+.+. +..++.+.|.++||.|.. . + .+++|||++.. +++
T Consensus 254 ~l~~~L~~~~~~~~-~-~~~~f~~~~~~----~~~~~~~~l~~~gi~v~~--f-~-----~~~~iRis~~~------~~~ 313 (330)
T PRK05664 254 RLAALLRRHGLTPA-G-GCALFQWVRTE----DAAALHEFLARRGILTRL--F-E-----QPASLRFGLPA------DEA 313 (330)
T ss_pred HHHHHHHHCCCccc-C-CcceEEEEecC----CHHHHHHHHHHCCeEEEE--C-C-----CCCeEEEECCC------CHH
Confidence 99999998877532 2 22345565542 567788889999999953 1 1 24689999642 368
Q ss_pred HHHHHHHHHHHHHH
Q 009673 465 EFVAIADFIHEGVE 478 (529)
Q Consensus 465 d~~~la~~i~~~~~ 478 (529)
+++++.+.|+++.+
T Consensus 314 ~~~~l~~al~~~~~ 327 (330)
T PRK05664 314 DWARLDQALLAYRK 327 (330)
T ss_pred HHHHHHHHHHHHHh
Confidence 89999999887654
No 203
>PLN02242 methionine gamma-lyase
Probab=99.83 E-value=1.5e-18 Score=182.85 Aligned_cols=224 Identities=18% Similarity=0.193 Sum_probs=157.3
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++...++| +.+++++|.+.. +.+.||++|+..++.++++|||+|++.++.|+++...... ......|
T Consensus 74 ~~Pt~~~LE----~~lA~l~g~~~~-----l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~---~~~~~~G 141 (418)
T PLN02242 74 FNPTVLNLG----RQMAALEGTEAA-----YCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAH---FLPRKCN 141 (418)
T ss_pred CChhHHHHH----HHHHHHhCCCeE-----EEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHH---hhhhccC
Confidence 567778888 678899999862 3468889999999999999999999999877654211000 0011234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. +++.++. .|++++++++++.++|+|++++++||+ ..|+++|+++|+++|++||+|++|.. +..
T Consensus 142 ~--~~~~~d~------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~-~~~----- 207 (418)
T PLN02242 142 I--TTTFVDI------TDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAP-MVL----- 207 (418)
T ss_pred c--eEEEcCC------CCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCc-cCC-----
Confidence 3 4444332 389999999976459999999999987 67999999999999999999999743 221
Q ss_pred CCCC-cccEEEecccccccC--CC-CeEEEeeCCCcchhHHHhhhcccccC--CCCCCChHHHHHHHHHHHHHhcCchHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRG--PR-GGMIFFKKDPVLGVELESAINNAVFP--GLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~G--pr-gG~i~~~~~~~~~~~l~~~i~~~~~p--~~~g~p~~~~iaala~al~~~~~~~~~ 373 (529)
.+.. ++|++++|++|++.| ++ ||++++++ ++.+.+...... ...|.+...+.+++. + .. ...+.
T Consensus 208 ~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~------~li~~l~~~~~~~~~~~g~~~~~~~A~l~-~-~~--l~tl~ 277 (418)
T PLN02242 208 SPARLGADVVVHSISKFISGGADIIAGAVCGPA------ELVNSMMDLHHGALMLLGPTMNPKVAFEL-S-ER--LPHLS 277 (418)
T ss_pred CHHHcCCcEEEEeCccccCCCCCceEEEEEcCH------HHHHHHHHHhhhhhhccCCCCCHHHHHHH-H-cC--CCcHH
Confidence 2222 589999999999854 34 69999887 566655433111 123443434444332 2 21 12456
Q ss_pred HHHHHHHHHHHHHHHHHHhcCcEEecCC
Q 009673 374 VYQNKVVSNCRALASRLVELGYKLVSGG 401 (529)
Q Consensus 374 ~~~~~i~~~a~~l~~~L~~~G~~v~~~g 401 (529)
.++++..+|++.+++.|++.++++..++
T Consensus 278 ~r~~~~~~~a~~la~~L~~~~~~V~yP~ 305 (418)
T PLN02242 278 LRMKEHCRRAMEYAKRMKELGLKVIYPG 305 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEECCC
Confidence 6778899999999999999888887543
No 204
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=1.2e-18 Score=181.87 Aligned_cols=212 Identities=19% Similarity=0.215 Sum_probs=147.7
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
++..+.+| ++++++.|.+. .+...+|++|+..++.++++|||+|+++++.|++.+.... ......+
T Consensus 51 ~pt~~~L~----~~lA~l~g~~~-----~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~----~~~~~~g- 116 (386)
T PRK08045 51 NPTRDVVQ----RALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFD----SLAKRGC- 116 (386)
T ss_pred CccHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHH----HHHhhCC-
Confidence 44566666 77888888642 3556777899999999999999999999998876432110 0001111
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~ 300 (529)
.++..+ + ..|++++++.+++ ++|+|++++|+||+ ..|+++|.++|+++|+++++|+++..+.. ..
T Consensus 117 -i~v~~v--d----~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~-----~~ 183 (386)
T PRK08045 117 -YRVLFV--D----QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPAL-----QN 183 (386)
T ss_pred -eEEEEe--C----CCCHHHHHHhccc-CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCcccc-----CC
Confidence 233332 2 3689999999987 89999999999997 78999999999999999999999765532 34
Q ss_pred CCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 301 PFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 301 ~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
|+. ++|+++.|+||++.|+. +|+++++++ ++.+++..... .+...+| .... .+++.+. .+..+
T Consensus 184 pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~-----~~~~~l~~~~~~~g~~~~p-~~~~----l~~rgl~--tl~~R 251 (386)
T PRK08045 184 PLALGADLVLHSCTKYLNGHSDVVAGVVIAKDP-----DVVTELAWWANNIGVTGGA-FDSY----LLLRGLR--TLVPR 251 (386)
T ss_pred chhhCCCEEEeecceeccCCCCceeEEEEeCcH-----HHHHHHHHHHHhcCCCCCH-HHHH----HHHhhhc--cHHHH
Confidence 454 78999999999998887 588877653 56555542211 1211121 1111 1222222 25677
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 009673 376 QNKVVSNCRALASRLVEL 393 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~~ 393 (529)
+++..+|+..+++.|++.
T Consensus 252 ~~~~~~na~~la~~L~~~ 269 (386)
T PRK08045 252 MELAQRNAQAIVKYLQTQ 269 (386)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 899999999999999884
No 205
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=3.3e-18 Score=178.30 Aligned_cols=290 Identities=17% Similarity=0.160 Sum_probs=186.0
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
|++..+.+| +.++++.|.+. .+...+|++|+..++.++++|||+|+++++.|++.+.... . ....
T Consensus 51 ~npt~~~Le----~~lA~leg~e~-----ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~-----~-~~~~ 115 (388)
T PRK08861 51 GNPNRGLLE----QTLSELESGKG-----AVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFN-----T-RANK 115 (388)
T ss_pred CCchHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHH-----H-HHhc
Confidence 455677777 67888999653 2444566699999999999999999999988876432110 0 0111
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
.++++..++ ..|++++++++++ ++++|++++|+||+ ..|+++|.++|+++|+++++|+++..+.. .
T Consensus 116 ~gi~v~~vd------~~d~e~l~~~i~~-~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~-----~ 183 (388)
T PRK08861 116 GDFKVQFVD------QSDAAALDAALAK-KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVL-----Q 183 (388)
T ss_pred CCeEEEEEC------CCCHHHHHHhcCc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence 123555543 3589999999987 89999999999987 78999999999999999999999876643 2
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
.|++ ++|++++|+||++.|+. ||+++++++ ++.+++..... ..|.... ...+ +..++.+. -+.-+
T Consensus 184 ~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~-----~~~~~~~~~~~--~~G~~~~-p~~a-~l~~rgl~--Tl~lR 252 (388)
T PRK08861 184 KPLELGADFVIHSTTKYINGHSDVIGGVLITKTK-----EHAEELAWWGN--CIGATGT-PFDS-YMTLRGIR--TLGAR 252 (388)
T ss_pred CCcccCCCEEEeecceeccCCCcceeEEEEecHH-----HHHHHHHHHHh--ccCCCCC-hHHH-HHHHhcCC--CHHHH
Confidence 4555 79999999999999875 688888653 56555543211 1122111 1111 12233332 34677
Q ss_pred HHHHHHHHHHHHHHHHhc-CcE-EecCCCC---------------CceEEEccCCCCCcHHHHHHhHhcC---CeEEcCC
Q 009673 376 QNKVVSNCRALASRLVEL-GYK-LVSGGSD---------------NHLVLVDLRPMGIDGARVEKILDMA---SITLNKN 435 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~~-G~~-v~~~gt~---------------~~~~~v~~~~~~i~~~~~~~~L~~~---GI~v~~~ 435 (529)
+++..+|+..+++.|++. .+. |..|+-. ..++.+++. + +.+.+.+.++.. .+.++.+
T Consensus 253 ~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~--~-~~~~~~~f~~~l~l~~~~~s~G 329 (388)
T PRK08861 253 MRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFA--G-SFEQLKVFVKALALFSLAESLG 329 (388)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeC--C-CHHHHHHHHhcCCcceEccCCC
Confidence 899999999999999884 332 3323211 123344443 2 234445555443 3333332
Q ss_pred C------CCCCCC------------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 436 S------VPGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 436 ~------~Pg~~~------------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
. .|.... ...++-||+++. -||.+.+.+-|.+++...
T Consensus 330 ~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG--------lE~~~dli~Dl~~al~~~ 384 (388)
T PRK08861 330 GVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVG--------LEDAQDLIADLDQAFAKA 384 (388)
T ss_pred CCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeC--------cCCHHHHHHHHHHHHHHH
Confidence 1 122110 012356898864 378888888888887654
No 206
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.82 E-value=1.9e-18 Score=180.95 Aligned_cols=215 Identities=25% Similarity=0.263 Sum_probs=149.0
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
++..+++| +++++++|.+. .+.++||++|+..++.++++|||+|++.++.|++.+... ...+...|.
T Consensus 60 ~p~~~~le----~~la~l~g~~~-----~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~----~~~~~~~G~ 126 (390)
T PRK08133 60 NPTVTMFQ----ERLAALEGAEA-----CVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLF----EKIFARFGI 126 (390)
T ss_pred ChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHH----HHHHHHcCc
Confidence 45566666 67889999875 255688889999999999999999999998887654211 011222343
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~ 300 (529)
+++.++++ |++++++.+++ ++|+|+++.++||+ ..|+++|.++|+++|+++++|+++..+.. ..
T Consensus 127 --~v~~vd~~------d~~~l~~~i~~-~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~-----~~ 192 (390)
T PRK08133 127 --ETTFVDLT------DLDAWRAAVRP-NTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPAL-----QQ 192 (390)
T ss_pred --EEEEECCC------CHHHHHHhcCc-CCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCccccc-----CC
Confidence 66665542 78999999987 89999999888886 78999999999999999999999765432 23
Q ss_pred CCC-cccEEEecccccccCC--C-CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHH
Q 009673 301 PFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (529)
Q Consensus 301 ~~~-~aDiv~~S~hK~l~Gp--r-gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~ 376 (529)
|+. ++|++++|+||++.|+ + ||+++.++ ++.+++...... .|. ......+. .+++.+ ..+..+.
T Consensus 193 pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~------~~~~~~~~~~~~--~g~-~~~~~~a~-~~l~gl--~tl~~R~ 260 (390)
T PRK08133 193 PLKLGADVVIHSATKYLDGQGRVLGGAVVGSK------ELMEEVFGFLRT--AGP-TLSPFNAW-VFLKGL--ETLSLRM 260 (390)
T ss_pred chhhCCcEEEeecceeecCCcceEeEEEEcCH------HHHHHHHHHHHH--hCC-CCCHHHHH-HHHccc--chHHHHH
Confidence 344 6899999999998653 3 48888776 444433221111 111 11122221 123322 2456778
Q ss_pred HHHHHHHHHHHHHHHhc-CcE
Q 009673 377 NKVVSNCRALASRLVEL-GYK 396 (529)
Q Consensus 377 ~~i~~~a~~l~~~L~~~-G~~ 396 (529)
++..+|++.+.+.|++. ++.
T Consensus 261 ~~~~~~a~~la~~L~~~p~v~ 281 (390)
T PRK08133 261 EAHSANALALAEWLEAHPGVE 281 (390)
T ss_pred HHHHHHHHHHHHHHHhCCCee
Confidence 88889999999999883 554
No 207
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.82 E-value=2.2e-18 Score=179.76 Aligned_cols=288 Identities=20% Similarity=0.186 Sum_probs=188.0
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
|++..+++| +++++++|.+. .+.++||+.|+.+++. +++|||+|+++++.|++...... ......|
T Consensus 45 ~~p~~~~le----~~la~l~g~~~-----~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~----~~~~~~G 110 (378)
T TIGR01329 45 GNPTRTALE----SLLAKLDKADR-----AFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLT----QVVPRSG 110 (378)
T ss_pred CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHH----HHHHHcC
Confidence 455566776 77889999854 3556889888877665 88999999999988765432100 0112234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. +++.++. .|++++++++++ ++|+|++++++||+ ..|+++|+++|+++|+++++|++|..+.. .
T Consensus 111 ~--~v~~vd~------~d~~~le~~i~~-~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~-----~ 176 (378)
T TIGR01329 111 V--VVVHVDT------TDLDKVKAALGP-KTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL-----C 176 (378)
T ss_pred c--EEEEeCC------CCHHHHHHhcCc-CceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 3 5555443 389999999987 89999999888886 77999999999999999999999866543 2
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (529)
.++. ++|++++|+||++.|+. +|+++++++ ++.+++..... .+....| .-+. ..+..+ ..+..
T Consensus 177 ~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~-----~~~~~~~~~~~~~G~~~~~---~~a~--l~~~~l--~tl~~ 244 (378)
T TIGR01329 177 NPLELGADIVYHSATKFLAGHSDVMAGVLAVKGE-----EIAKKVYFLQNSTGSGLAP---FDCW--LLLRGI--KTLAI 244 (378)
T ss_pred ChhhcCCcEEEEecceeccCCccceeEEEEeCcH-----HHHHHHHHHHHhcCCcCCH---HHHH--HHHccC--CCHHH
Confidence 3444 78999999999998864 689988764 55555543322 1211111 1111 112222 34577
Q ss_pred HHHHHHHHHHHHHHHHHhc-Cc-EEecCCC---------------CCceEEEccCCCCCc-HHHHHHhHhcCCeEEcCCC
Q 009673 375 YQNKVVSNCRALASRLVEL-GY-KLVSGGS---------------DNHLVLVDLRPMGID-GARVEKILDMASITLNKNS 436 (529)
Q Consensus 375 ~~~~i~~~a~~l~~~L~~~-G~-~v~~~gt---------------~~~~~~v~~~~~~i~-~~~~~~~L~~~GI~v~~~~ 436 (529)
+.++..+|+..+.+.|++. .+ .+..++- ...++.+++ .+.+ ...+...|+..+|.++.+.
T Consensus 245 R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~--~~~~~~~~~~~~L~~~~i~~s~G~ 322 (378)
T TIGR01329 245 RIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFET--GSVALSKRLVEATKLFSITVSFGS 322 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEE--CCHHHHHHHHHhCcCcccccCCCC
Confidence 7889999999999999873 22 2222210 112344444 2333 4567777777888776643
Q ss_pred C------CCCCC--C----------CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 437 V------PGDKS--A----------LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 437 ~------Pg~~~--~----------~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
+ |-... . ..++-||+|+. -||.+.+.+-|.+++..
T Consensus 323 ~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG--------lE~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 323 VNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVG--------IEDVDDLISDLDIAFVT 375 (378)
T ss_pred CCceeeCCCccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHHh
Confidence 2 32110 0 12456898864 37788888888877763
No 208
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.82 E-value=2.1e-18 Score=181.36 Aligned_cols=217 Identities=18% Similarity=0.192 Sum_probs=151.0
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
++...++| +.+++++|.+. .|.++||+.|+..++.++++|||+|++..+.|++.+... ...+...|.
T Consensus 64 ~p~~~~le----~~lA~l~g~~~-----~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~----~~~~~~~G~ 130 (403)
T PRK07503 64 NPTLALLE----QRMASLEGGEA-----AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFL----HHGLGEFGV 130 (403)
T ss_pred CchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHH----HHHHhhCCE
Confidence 34566777 67889999875 355689999999999999999999999988776543211 011222343
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~ 300 (529)
++..+++ .|++++++.+++ ++|+|++..++||+ ..|+++|.++|+++|++||+|++|..+.. ..
T Consensus 131 --~v~~vd~------~d~~~l~~~i~~-~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~-----~~ 196 (403)
T PRK07503 131 --TVRHVDL------TDPAALKAAISD-KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYL-----QR 196 (403)
T ss_pred --EEEEeCC------CCHHHHHHhcCc-cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-----CC
Confidence 5555543 378999999987 89999998888887 77999999999999999999999865532 22
Q ss_pred CCC-cccEEEecccccccCC---CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHH
Q 009673 301 PFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (529)
Q Consensus 301 ~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~ 376 (529)
++. ++|++++|++|+++|+ +||+++.++ ++.+++.........|.......+++ ++..+ ..+..+.
T Consensus 197 ~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~------~l~~~l~~~~~~~~~g~~~s~~~a~l--~l~~L--~tl~~r~ 266 (403)
T PRK07503 197 PLELGADLVVHSATKYLGGHGDITAGLVVGGK------ALADRIRLEGLKDMTGAVMSPFDAFL--LMRGL--KTLALRM 266 (403)
T ss_pred chhhCCCEEEccccccccCCCceeEEEEEcCH------HHHHHHHhhhHHhCcCCCCCHHHHHH--HHcCc--chHHHHH
Confidence 333 6899999999999764 378888665 66666642211112222122222222 23332 2345667
Q ss_pred HHHHHHHHHHHHHHHhc-CcE
Q 009673 377 NKVVSNCRALASRLVEL-GYK 396 (529)
Q Consensus 377 ~~i~~~a~~l~~~L~~~-G~~ 396 (529)
++..+|++.+.+.|.+. .+.
T Consensus 267 ~~~~~na~~~a~~L~~~p~v~ 287 (403)
T PRK07503 267 DRHCASAQAVAEWLARHPAVE 287 (403)
T ss_pred HHHHHHHHHHHHHHHhCCCcc
Confidence 78889999999999883 443
No 209
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.82 E-value=1.6e-18 Score=180.30 Aligned_cols=291 Identities=14% Similarity=0.088 Sum_probs=182.8
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccc
Q 009673 141 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 220 (529)
Q Consensus 141 ~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~ 220 (529)
.|++..+.+| +.++++.|.+. .+.+.||++|+..++.++++|||+|+++++.|++..... .......
T Consensus 47 ~gnPt~~~lE----~~lA~l~g~~~-----~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~----~~~~~~~ 113 (377)
T TIGR01324 47 RGTLTHFALQ----DAMCELEGGAG-----CYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFC----DIVLKRM 113 (377)
T ss_pred CCCccHHHHH----HHHHHHhCCCc-----EEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHH----HHHHHhc
Confidence 3667778888 67788899764 245678889999999999999999999988775432100 0011122
Q ss_pred cceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccccccc
Q 009673 221 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (529)
Q Consensus 221 g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~ 298 (529)
|. ++..++.+ +.+++++.+++ ++|+|++++++||+ ..|+++|+++|+++|+++++|++|..|...
T Consensus 114 gi--~v~~~d~~------~~e~l~~~i~~-~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~---- 180 (377)
T TIGR01324 114 GV--DITYYDPL------IGEDIATLIQP-NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLF---- 180 (377)
T ss_pred Cc--EEEEECCC------CHHHHHHhcCC-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcccccc----
Confidence 33 44443321 23789998887 89999999888886 679999999999999999999999887653
Q ss_pred CCCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673 299 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (529)
Q Consensus 299 ~~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (529)
.|++ ++|++++|+||++.|+. ||++++++ +..+++..... ..|....+ ..+. ..++.+. .+..
T Consensus 181 -~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~------~~~~~l~~~~~--~~G~~l~p-~~a~-~~~rgl~--tl~~ 247 (377)
T TIGR01324 181 -KPLEHGVDISIQAGTKYLVGHSDIMIGTVVANA------RTWDQLREHSY--LMGQMVDA-DDAY-TTLRGLR--TLGV 247 (377)
T ss_pred -CccccCceEEEecCceeccCCCCceEEEEEeCH------HHHHHHHHHHH--HhCCCCCH-HHHH-HHHhhhh--hHHH
Confidence 2444 79999999999998865 48888876 44444432111 11221111 1111 1222221 2345
Q ss_pred HHHHHHHHHHHHHHHHHhc-Cc-EEecCC---------------CCCceEEEccCCCCC-cHHHHHHhHhcCCeEEcCCC
Q 009673 375 YQNKVVSNCRALASRLVEL-GY-KLVSGG---------------SDNHLVLVDLRPMGI-DGARVEKILDMASITLNKNS 436 (529)
Q Consensus 375 ~~~~i~~~a~~l~~~L~~~-G~-~v~~~g---------------t~~~~~~v~~~~~~i-~~~~~~~~L~~~GI~v~~~~ 436 (529)
++++..+|+..+++.|++. .+ .+..++ ...+++.+++...+. ....+.+.|+..++.++-+.
T Consensus 248 R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG~ 327 (377)
T TIGR01324 248 RLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWGG 327 (377)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCCC
Confidence 6888899999999999883 33 233221 123455556542111 12345555655666665432
Q ss_pred C------CC-CCC-------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 437 V------PG-DKS-------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 437 ~------Pg-~~~-------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+ |. ... ...++-||+++. -||.+.+.+-|.+++.
T Consensus 328 ~~sl~~~~~~~~~~~~~~~~~~~~~liR~svG--------lE~~~dl~~dl~~al~ 375 (377)
T TIGR01324 328 YESLALCNQPELGHRPNIKRNLEGPLIRVHIG--------LENVDDLKADLKAGFE 375 (377)
T ss_pred ccceeecCCCCCCHHHHHhccCCCCEEEEEeC--------CCCHHHHHHHHHHHHh
Confidence 1 11 000 011245898864 2677777777777664
No 210
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=6.5e-18 Score=177.43 Aligned_cols=213 Identities=23% Similarity=0.237 Sum_probs=149.5
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+++| ++++++.|.+. .|.++||++|+..++.++++|||+|+++++.|++.... + .......|
T Consensus 58 ~~p~~~~Le----~~lA~l~g~~~-----~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~-~---~~~~~~~g 124 (405)
T PRK08776 58 GNPTRDLLG----EALAELEGGAG-----GVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRL-F---NALAKKGH 124 (405)
T ss_pred CChHHHHHH----HHHHHHhCCCc-----eEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHH-H---HHHHHhcC
Confidence 345556666 67888899754 46678999999999999999999999999887653211 0 00111123
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
.+++.++ ..|++++++.+++ ++|+|++++|+||+ ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 125 --~~v~~v~------~~d~~~l~~~i~~-~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~-----~ 190 (405)
T PRK08776 125 --FALITAD------LTDPRSLADALAQ-SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPAL-----Q 190 (405)
T ss_pred --cEEEEEC------CCCHHHHHHhcCc-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 2444433 2488999999977 89999999999887 78999999999999999999999865432 2
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccc-cCCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (529)
.|+. ++|++++|+||++.|+. +|+++++++ ++.+++.... ..+.. ++ .+.+. ..++.+ ..+..
T Consensus 191 ~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~-----~l~~~l~~~~~~~g~~--~s--~~~a~-l~~~gl--~tl~~ 258 (405)
T PRK08776 191 KPLEFGADLVLHSTTKYINGHSDVVGGAVVARDA-----ELHQQLVWWANALGLT--GS--PFDAF-LTLRGL--RTLDA 258 (405)
T ss_pred CcccccCCEEEecCceeecCCCCceEEEEEeCCH-----HHHHHHHHHHHhcCCC--CC--HHHHH-HHHhhh--CcHHH
Confidence 3444 78999999999998774 588877654 5666554321 11221 11 12111 122222 34577
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 009673 375 YQNKVVSNCRALASRLVEL 393 (529)
Q Consensus 375 ~~~~i~~~a~~l~~~L~~~ 393 (529)
++++..+|+..+.+.|++.
T Consensus 259 r~~~~~~na~~la~~L~~~ 277 (405)
T PRK08776 259 RLRVHQENADAIAALLDGH 277 (405)
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 8899999999999999873
No 211
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.82 E-value=1.8e-18 Score=177.97 Aligned_cols=265 Identities=18% Similarity=0.181 Sum_probs=173.4
Q ss_pred HHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC
Q 009673 154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (529)
Q Consensus 154 ~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~ 232 (529)
++.+++++|++.. -+|.+++|+ +++..+ ..+++||| |++.+|.|..+. ..+...|. ++++++.+
T Consensus 59 ~~~ia~~~~~~~~---~~I~i~~Gs~e~i~~l-~~~~~~g~-v~v~~P~y~~y~--------~~~~~~g~--~~~~v~~~ 123 (339)
T PRK06959 59 AACAARYYGAPDA---AHVLPVAGSQAAIRAL-PALLPRGR-VGIAPLAYSEYA--------PAFARHGH--RVVPLDEA 123 (339)
T ss_pred HHHHHHHhCCCCc---ccEEECcCHHHHHHHH-HHhcCCCe-EEEcCCCcHHHH--------HHHHHCCC--EEEeeccc
Confidence 4778899999742 257779998 777644 55678887 777888765432 13344554 66665543
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHH---HHHhCCEEEEecccccccccccccCCCC-Ccc-
Q 009673 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQI---ADAVGALLMMDMAHISGLVAASVVADPF-KYC- 305 (529)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~i---a~~~g~~livD~ah~~Gli~~~~~~~~~-~~a- 305 (529)
. +.+ .+ +++++++++||||+ ..+.+++.++ |++++.++|+|+++. .+...... ..+ .+.
T Consensus 124 ~-------~~~----~~-~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~-~~~~~~s~-~~~~~~~~ 189 (339)
T PRK06959 124 A-------DTL----PA-ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFA-DTLPAASL-AAHTDRPG 189 (339)
T ss_pred c-------hhc----cc-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCc-cCCCcccc-hhccCCCC
Confidence 1 222 22 45788888899997 5565555554 567899999999854 33321000 011 111
Q ss_pred cEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchH-HHHHHHHHHH
Q 009673 306 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSN 382 (529)
Q Consensus 306 Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~~ 382 (529)
-+++.|++|.+ +|.|.||+++++ ++.+.+.+...+.. .+.. ...+...+|+ ..++ ++.++++.++
T Consensus 190 vi~l~SfSK~~gl~GlRiGy~v~~~------~li~~l~~~~~~~~--vs~~-~q~a~~~~L~---~~~~~~~~~~~~~~~ 257 (339)
T PRK06959 190 LVVLRSVGKFFGLAGVRAGFVLAAP------ALLAALRDALGAWT--VSGP-ARHAVRAAFA---DAAWQAAMRERLAAD 257 (339)
T ss_pred EEEEecChhhcCCcchheEEEecCH------HHHHHHHHhcCCCC--CcHH-HHHHHHHHhC---cHHHHHHHHHHHHHH
Confidence 27889999986 789999999987 78777766543322 2122 2222333443 2333 6677888889
Q ss_pred HHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673 383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 462 (529)
Q Consensus 383 a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~ 462 (529)
++.+.+.|++.|+.+.. ...++|+++. +..++.+.|.++||.|... + .++++||++. .+
T Consensus 258 r~~l~~~L~~~g~~~~~---~~~f~~~~~~----~~~~l~~~l~~~GI~vr~~---~-----~~~~lRisi~------~~ 316 (339)
T PRK06959 258 GARLAALLRAHGFAVHA---TPLFSWTDDP----RAAALHAALARRGIWTRYF---A-----PPPSVRFGLP------AD 316 (339)
T ss_pred HHHHHHHHHHCCCCccC---cceEEEEeCC----CHHHHHHHHHhCCeEEEEC---C-----CCCeEEEECC------CC
Confidence 99999999998887653 2355677653 3567888888999999631 1 2468999852 23
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 009673 463 EKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 463 ~~d~~~la~~i~~~~~~~ 480 (529)
++|++++.+.|++++...
T Consensus 317 ~~e~~~l~~al~~~~~~~ 334 (339)
T PRK06959 317 EAEWQRLEDALAECVPTL 334 (339)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 689999999998876543
No 212
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=2.4e-18 Score=179.77 Aligned_cols=213 Identities=19% Similarity=0.167 Sum_probs=148.9
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++.+.++| +.+++++|.+. .|.++||+.|+..++.++++|||+|+++++.|++..... +.+...|
T Consensus 51 ~np~~~~lE----~~lA~l~g~~~-----~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~-----~~~~~~g 116 (385)
T PRK08574 51 ENPTLRPLE----EALAKLEGGVD-----ALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLL-----KSLEKFG 116 (385)
T ss_pred CCccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHH-----HHhhccC
Confidence 456677888 67889999864 245688999999999999999999999998887653211 0111223
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. ++..+ .+|++++++++++.++|+|+++.++||+ ..|+++|+++|+++|+++++|++|..++..
T Consensus 117 ~--~v~~~-------~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~----- 182 (385)
T PRK08574 117 V--KVVLA-------YPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLY----- 182 (385)
T ss_pred c--EEEEE-------CCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-----
Confidence 2 33332 2468999999876579999999888887 789999999999999999999998777543
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
.++. ++|++++|+||++.|+. ||+++++++ ++.+++...... .|.......++ .+++.+ ..+..+
T Consensus 183 ~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~-----~~~~~~~~~~~~--~g~~~~p~~a~--l~l~~l--~tL~~R 251 (385)
T PRK08574 183 RPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSG-----EFLEELWEWRRR--LGTIMQPFEAY--LVLRGL--KTLEVR 251 (385)
T ss_pred ChhhhCCcEEEeeCceeecCCCCceeEEEEECcH-----HHHHHHHHHHHh--cCCCCCHHHHH--HHHccc--CcHHHH
Confidence 2333 68999999999998864 686666553 565555422111 12111111222 223332 235677
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 009673 376 QNKVVSNCRALASRLVEL 393 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~~ 393 (529)
.++..+|+..+.+.|++.
T Consensus 252 ~~~~~~na~~la~~L~~~ 269 (385)
T PRK08574 252 FERQCRNAMAIAEFLSEH 269 (385)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 888899999999999873
No 213
>PRK15029 arginine decarboxylase; Provisional
Probab=99.82 E-value=2.3e-18 Score=189.88 Aligned_cols=296 Identities=15% Similarity=0.099 Sum_probs=201.6
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (529)
Q Consensus 153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v 231 (529)
+++.++++||++...+ .++|| .+|.++++++++|||+|++...+|-+.+ | .+.++|+ .++++.-
T Consensus 210 Aq~~aA~~fgA~~t~F-----lvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~-~-------al~L~ga--~Pvyl~P 274 (755)
T PRK15029 210 SEKYAARVFGADRSWS-----VVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIE-Q-------GLILTGA--KPVYMVP 274 (755)
T ss_pred HHHHHHHHhCCCcEEE-----EeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH-H-------HHHHcCC--eEEEecc
Confidence 5588899999998532 36777 8999999999999999999887665543 1 3455665 5655432
Q ss_pred C-CCC---CCCC-----HHHHHHHhhhc---------CCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEeccccccc
Q 009673 232 D-EST---GLVD-----YDMLEKTAILF---------RPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGL 292 (529)
Q Consensus 232 ~-~~~---~~iD-----~d~le~~i~~~---------~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gl 292 (529)
. .+. +.++ ++.|++++..+ ||+++++.+|+|-+ ..|+++|.++|+++|++|++|+||++.+
T Consensus 275 ~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~ 354 (755)
T PRK15029 275 SRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_pred cccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECcccccc
Confidence 1 111 2345 89999988653 23488998888776 7799999999999999999999998876
Q ss_pred ccccccC--CCC-------Cccc-EEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHH
Q 009673 293 VAASVVA--DPF-------KYCD-VVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLA 361 (529)
Q Consensus 293 i~~~~~~--~~~-------~~aD-iv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala 361 (529)
.+.+..+ +.+ .++| +++.|+||+|++... ++|..+...... + .++++.+..-..+.+|++..+|++-
T Consensus 355 ~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~i-d-~~r~~~~l~~~qSTSPSY~LmASLD 432 (755)
T PRK15029 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAI-N-FSRFNQAYMMHATTSPLYAICASND 432 (755)
T ss_pred ccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCcccc-C-HHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 5544443 333 3688 999999999988766 788775520000 1 2344444333345789999999999
Q ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-C------------------------------------------cEEe
Q 009673 362 VCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-G------------------------------------------YKLV 398 (529)
Q Consensus 362 ~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G------------------------------------------~~v~ 398 (529)
+|..++.....++..++..+.+..+++.|.+. + +.++
T Consensus 433 ~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (755)
T PRK15029 433 VAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVM 512 (755)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhhhccccceeee
Confidence 88877654234566777777788888888662 2 2222
Q ss_pred cCC---------------CCCceEEEccCCCCCcHH---------HHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccC
Q 009673 399 SGG---------------SDNHLVLVDLRPMGIDGA---------RVEKILDMASITLNKNSVPGDKSALVPGGIRIGSP 454 (529)
Q Consensus 399 ~~g---------------t~~~~~~v~~~~~~i~~~---------~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~ 454 (529)
.++ -|.--+++.++..+.+|. .+.++|+++||.+.... ...+=
T Consensus 513 ~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~---------~~~vL---- 579 (755)
T PRK15029 513 HPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT---------DFQIM---- 579 (755)
T ss_pred cccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecC---------CCeEE----
Confidence 110 011113344444455665 89999999999997531 12222
Q ss_pred CCccCCCCHHHHHHHHHHHHHHHH
Q 009673 455 AMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 455 ~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.+.+.|.++++++++.+.|.+.-+
T Consensus 580 ~l~s~g~t~~~~~~L~~aL~~~~~ 603 (755)
T PRK15029 580 FLFSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHH
Confidence 244557788999999998887643
No 214
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.82 E-value=5e-18 Score=174.15 Aligned_cols=288 Identities=20% Similarity=0.231 Sum_probs=179.8
Q ss_pred cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHH
Q 009673 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN 181 (529)
Q Consensus 103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~ 181 (529)
+.+++..++|+.++.+.+.....+ .. ||. .. ..+++ +++++++|.+++ +|.+++|+ +++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~-~~----y~~------~~-~~~lr----~~la~~~~~~~~----~i~~t~G~~~~i 77 (330)
T TIGR01140 18 DWLDFSTGINPLGPPVPPIPASAW-AR----YPD------PE-YDELR----AAAAAYYGLPAA----SVLPVNGAQEAI 77 (330)
T ss_pred heeEccccCCCCCCChhhcchHHH-hh----CCC------cc-HHHHH----HHHHHHhCCChh----hEEECCCHHHHH
Confidence 457787777765433333322211 12 221 11 23444 777888898764 56678988 666
Q ss_pred HHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (529)
Q Consensus 182 ~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (529)
..+ ..++.+| .|++.+|.|..+.. .....|. +++.++ |++++++.+. ++++|+++.|+
T Consensus 78 ~~~-~~~l~~g-~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~--------d~~~l~~~~~--~~~~v~i~~p~ 135 (330)
T TIGR01140 78 YLL-PRLLAPG-RVLVLAPTYSEYAR--------AWRAAGH--EVVELP--------DLDRLPAALE--ELDVLVLCNPN 135 (330)
T ss_pred HHH-HHHhCCC-eEEEeCCCcHHHHH--------HHHHcCC--EEEEeC--------CHHHHHhhcc--cCCEEEEeCCC
Confidence 665 4446788 68888887754421 2223343 555543 7899998883 57888888888
Q ss_pred CCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccc--cCCCCeEEEeeCCCcc
Q 009673 262 YPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVL 332 (529)
Q Consensus 262 ~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l--~GprgG~i~~~~~~~~ 332 (529)
||+ ..+ +++|+++|+++|+++|+|++|. ++..........+ ..+++++|+||++ +|.|.||+++++
T Consensus 136 NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~---- 210 (330)
T TIGR01140 136 NPTGRLIPPETLLALAARLRARGGWLVVDEAFI-DFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP---- 210 (330)
T ss_pred CCCCCCCCHHHHHHHHHHhHhcCCEEEEECccc-ccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCH----
Confidence 887 556 6677888899999999999964 3332210000001 2358999999997 567779999987
Q ss_pred hhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchH-HHHHHHHHHHHHHHHHHHHhcC-cEEecCCCCCceEEEc
Q 009673 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVELG-YKLVSGGSDNHLVLVD 410 (529)
Q Consensus 333 ~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~~a~~l~~~L~~~G-~~v~~~gt~~~~~~v~ 410 (529)
++.+.+...... . + .+....+++...++ ..++ +..++++.++++.+.+.|++.+ +.+..+ ...+.|++
T Consensus 211 --~~~~~l~~~~~~-~-~-~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~f~~~~ 280 (330)
T TIGR01140 211 --ALLARLREALGP-W-T-VNGPARAAGRAALA---DTAWQAATRARLAAERARLAALLARLGGLEVVGG--TALFLLVR 280 (330)
T ss_pred --HHHHHHHhcCCC-C-C-chHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHHhCCCceECCC--CCeEEEEE
Confidence 677777654322 2 1 12222222222332 3344 6667888899999999998876 554432 34667777
Q ss_pred cCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccC
Q 009673 411 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSP 454 (529)
Q Consensus 411 ~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~ 454 (529)
+. +..++.+.|.++||.+..+..++ ....++|||++.
T Consensus 281 ~~----~~~~l~~~l~~~gi~v~pg~~f~---~~~~~~iRi~~~ 317 (330)
T TIGR01140 281 TP----DAAALHEALARRGILIRDFDNFP---GLDPRYLRFALP 317 (330)
T ss_pred cC----CHHHHHHHHHHCCEEEEECCCCC---CCCCCEEEEEec
Confidence 64 24667777878899995433221 123468999864
No 215
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.82 E-value=3.7e-18 Score=177.79 Aligned_cols=215 Identities=22% Similarity=0.211 Sum_probs=151.7
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+++| +++++++|.+. .+.++||++|+..++.++++|||+|++..+.|++...... ......|
T Consensus 38 ~~p~~~~le----~~la~l~g~~~-----a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~----~~~~~~g 104 (369)
T cd00614 38 GNPTVDALE----KKLAALEGGEA-----ALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFE----RLLPKLG 104 (369)
T ss_pred CChhHHHHH----HHHHHHHCCCC-----EEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHH----HHHhhcC
Confidence 456677887 67888999764 3556899999999999999999999999987765431100 0111234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. ++..++.+ |++++++.+++ ++++|++.+++||+ ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 105 ~--~~~~v~~~------d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~-----~ 170 (369)
T cd00614 105 I--EVTFVDPD------DPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL-----Q 170 (369)
T ss_pred e--EEEEeCCC------CHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhc-----C
Confidence 3 55554432 58999999987 89999999888876 77999999999999999999999876643 2
Q ss_pred CCCC-cccEEEecccccccCC---CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
.++. ++|++++|++|++.|+ ++|+++++++ ++.+++...... .|+......++ .+++.+ ..+..+
T Consensus 171 ~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~-----~l~~~l~~~~~~--~g~~~~p~~a~--~~l~~l--~tl~~r 239 (369)
T cd00614 171 RPLELGADIVVHSATKYIGGHSDVIAGVVVGSGE-----ALIQRLRFLRLA--LGTILSPFDAW--LLLRGL--KTLPLR 239 (369)
T ss_pred ChhhhCCcEEEeccceeccCCCCceEEEEEeCcH-----HHHHHHHHHHHh--hCCCCCHHHHH--HHHcCC--CCHHHH
Confidence 3444 6899999999999764 4799999773 455555432211 11111111111 123332 234567
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 009673 376 QNKVVSNCRALASRLVELG 394 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~~G 394 (529)
.++..+|++.+.+.|++.+
T Consensus 240 ~~~~~~na~~la~~L~~~~ 258 (369)
T cd00614 240 MERHSENALKVAEFLEKHP 258 (369)
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 8889999999999998853
No 216
>PRK08637 hypothetical protein; Provisional
Probab=99.81 E-value=4.2e-18 Score=178.68 Aligned_cols=276 Identities=16% Similarity=0.175 Sum_probs=168.0
Q ss_pred eeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccc-ccccceEEEEEcccCCCCCCCCHHHHHHHhh
Q 009673 171 NVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAI 248 (529)
Q Consensus 171 ~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i-~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~ 248 (529)
+|.+|+|+ +++..++.++++|||+|++++|.|+.+.. .+ ...|. ++++++++.+++.+|++++++.++
T Consensus 71 ~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~~g~--~vv~v~~~~~~~~~d~~~l~~~~~ 140 (388)
T PRK08637 71 LPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKL--------TFNTRRGA--EIVTYPIFDEDGGFDTDALKEALQ 140 (388)
T ss_pred eeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHhcCC--EEEEecccCCCCcCCHHHHHHHHH
Confidence 56678888 89999999999999999999998765431 11 12454 677777732446789999998886
Q ss_pred ---hcCCcEEEEcCCCCCC--CC---CHHHHHHHHHH-----hCCEEEEecccccccccccccCCC-C----C-cccE--
Q 009673 249 ---LFRPKLIIAGASAYPR--DF---DYPRMRQIADA-----VGALLMMDMAHISGLVAASVVADP-F----K-YCDV-- 307 (529)
Q Consensus 249 ---~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~-----~g~~livD~ah~~Gli~~~~~~~~-~----~-~aDi-- 307 (529)
+...+++++++|+||+ .. .+++|.++|++ |+++||+|++ |.++.+.+....+ + + ...+
T Consensus 141 ~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~-Y~~l~~~~~~~~~~~~~~~~~~~~vi~ 219 (388)
T PRK08637 141 AAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDA-YFGLFYEDSYKESLFAALANLHSNILA 219 (388)
T ss_pred hhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEeccc-chhcccCCccchhhHHHhhcccccceE
Confidence 2133456677899997 33 46677777765 8999999998 4555544321111 1 1 1122
Q ss_pred -EEeccccc--ccCCCCeEEEeeCCCcchhHHHhhhccc----ccCCCCCCChHHHHHHHHHHHHHhcCchHH----HHH
Q 009673 308 -VTTTTHKS--LRGPRGGMIFFKKDPVLGVELESAINNA----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFK----VYQ 376 (529)
Q Consensus 308 -v~~S~hK~--l~GprgG~i~~~~~~~~~~~l~~~i~~~----~~p~~~g~p~~~~iaala~al~~~~~~~~~----~~~ 376 (529)
.+.|++|. ++|.|.||++++.......++.+.+... ......+.+.. ..+++..++. ...+. +..
T Consensus 220 i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~-~q~a~~~~l~---~~~~~~~~~~~~ 295 (388)
T PRK08637 220 VKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHP-SQSAVLRALN---SPEFDKEKQEKF 295 (388)
T ss_pred EEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcH-HHHHHHHHhC---CHHHHHHHHHHH
Confidence 33599996 3899999998653000000455544321 11111222233 2233333342 22332 233
Q ss_pred HHHHHHHHHHHHHHHhc----CcEEecCCCCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEE
Q 009673 377 NKVVSNCRALASRLVEL----GYKLVSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRI 451 (529)
Q Consensus 377 ~~i~~~a~~l~~~L~~~----G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRi 451 (529)
..+.++++.+.+.|.+. ++.+..+ ..+.++|+.+. +.+..++.+.| +++||.+.. + .++++||
T Consensus 296 ~~~~~r~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~l~--~~~~~~l~~~l~~~~gv~~~~----~-----~~~~iRi 363 (388)
T PRK08637 296 QILKERYEKTKEVLYDGKYDDAWQAYPF-NSGYFMCLKLK--GVDAEELRVHLLEKYGIGTIA----L-----NETDLRI 363 (388)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcccccc-cceEEEEecCC--hHHHHHHHHHHhhhcceEEEe----c-----cCCceEE
Confidence 44556666677777654 4555443 23456677774 33556665555 678998742 1 2568999
Q ss_pred ccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 452 GSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 452 g~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
++.. ..++++++.++.|.++++
T Consensus 364 ~~~~-----~~~~~i~~~~~~l~~~~~ 385 (388)
T PRK08637 364 AFSC-----VEEEDIPELFDSIYKAIK 385 (388)
T ss_pred Eeec-----CCHHHHHHHHHHHHHHHH
Confidence 8753 347899999998888775
No 217
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.81 E-value=6e-18 Score=187.94 Aligned_cols=305 Identities=20% Similarity=0.241 Sum_probs=196.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC-------C-CCEEEEcCCCCCccccccccccccc
Q 009673 145 YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-------P-HDRIMGLDLPHGGHLSHGFMTPKRR 216 (529)
Q Consensus 145 ~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~-------p-GD~Vl~~~~~~~g~~s~g~~~~~~~ 216 (529)
+.+.+.+. ++++++++|.+. +.+++.+|+.+++++++++-. + .++|+++...|+.+.. .
T Consensus 541 ~lq~i~el-q~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa--------s 607 (954)
T PRK12566 541 YRAMIDEL-EAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA--------S 607 (954)
T ss_pred HHHHHHHH-HHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH--------H
Confidence 44555543 389999999997 589999999888888877632 3 3567777766655532 1
Q ss_pred cccccceEEEEEcccCCCCCCCCHHHHHHHhhhcC--CcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccc
Q 009673 217 VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR--PKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGL 292 (529)
Q Consensus 217 i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~--pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gl 292 (529)
....| ++++.++.| ++|.+|+++|++++++.+ +.+|++.++++.+ ..++++|+++|+++|+++++|++|..++
T Consensus 608 a~~~G--ieVv~Vp~D-~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~ 684 (954)
T PRK12566 608 AQMAG--MRVVIVECD-PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQ 684 (954)
T ss_pred HHHCC--CEEEEeccC-CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhc
Confidence 22344 477777777 578999999999997434 4456666666554 4679999999999999999999998665
Q ss_pred ccccccCCCCC-cccEEEecccccccCCCC-eEE-----EeeCCCcchhHHHhhhcccc---cCC---CCCC----ChHH
Q 009673 293 VAASVVADPFK-YCDVVTTTTHKSLRGPRG-GMI-----FFKKDPVLGVELESAINNAV---FPG---LQGG----PHNH 355 (529)
Q Consensus 293 i~~~~~~~~~~-~aDiv~~S~hK~l~Gprg-G~i-----~~~~~~~~~~~l~~~i~~~~---~p~---~~g~----p~~~ 355 (529)
... ..|-+ ++||+++++||||++|+| |.. .+++ .+...+.... ..+ -.|+ +...
T Consensus 685 ~~l---~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~------~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gs 755 (954)
T PRK12566 685 VGL---ARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRA------HLAPFVANHPVVPVEGPDPNNGAVSAAPWGS 755 (954)
T ss_pred cCC---CChhhcCCCEEEecCCcccCcCccCCCCccchhhhhh------hhhhhccCCCCcCCCCCCCCCCceeecccch
Confidence 532 22333 799999999999987776 333 2232 2222222110 000 0111 1111
Q ss_pred -HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC---CCceEEEccCC----CCCcHHHHHHhHhc
Q 009673 356 -TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS---DNHLVLVDLRP----MGIDGARVEKILDM 427 (529)
Q Consensus 356 -~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt---~~~~~~v~~~~----~~i~~~~~~~~L~~ 427 (529)
.++-.+.++-.....+.++.......|++++.+.|.+ ++.+...+. ..|-+.+++.+ .+++..++.+.|.+
T Consensus 756 a~~l~~A~~Yi~~lG~eLk~aa~~ailnAnYla~rL~~-~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d 834 (954)
T PRK12566 756 ASILPISWMYIAMMGPQLADASEVAILSANYLANQLGG-AFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMD 834 (954)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHhHh-hCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHH
Confidence 1121222222222223444455557799999999977 555443221 12445566542 24666778888889
Q ss_pred CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 009673 428 ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKK 485 (529)
Q Consensus 428 ~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~~~ 485 (529)
+||.....+.| .++.+||+....++ ++|++++++.+..+.....++..
T Consensus 835 ~Gihapt~~fP------v~~~LmIepTE~es----keEIDrf~eAL~~I~~e~~~v~~ 882 (954)
T PRK12566 835 YGFHAPTMSFP------VPGTLMVEPTESES----KAELDRFVEAMLSIRAEIGKVQE 882 (954)
T ss_pred CCcEEeEEeec------cCCEEEEEeeeeCC----HHHHHHHHHHHHHHHHHHHHHHc
Confidence 99987543233 36789998766654 89999999999998887766643
No 218
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.81 E-value=4.2e-18 Score=177.08 Aligned_cols=284 Identities=17% Similarity=0.178 Sum_probs=179.7
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+++| +.++++.|.+. .+.+.||++|+..++ ++++|||+|+++++.|++.+... .......|
T Consensus 50 ~~pt~~~le----~~la~l~g~~~-----~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~----~~~~~~~G 115 (366)
T PRK08247 50 GNPTRGVLE----QAIADLEGGDQ-----GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLF----EEHWKKWN 115 (366)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHH----HHHhhccC
Confidence 455677777 67899999976 255688888888665 68899999999999887643211 01122334
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. ++..++. .|++++++++++ ++++|++++|+||+ ..|+++|.++|+++|+++|+|+++..++. .
T Consensus 116 ~--~v~~vd~------~d~~~l~~~i~~-~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~-----~ 181 (366)
T PRK08247 116 V--RFVYVNT------ASLKAIEQAITP-NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVL-----Q 181 (366)
T ss_pred c--eEEEECC------CCHHHHHHhccc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccc-----c
Confidence 3 5555442 489999999987 89999999999986 56899999999999999999999754432 2
Q ss_pred CCCC-cccEEEecccccccCC---CCeEEEeeCCCcchhHHHhhhcccccC-CCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~p-~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (529)
.|+. ++|++++|++|++.|+ ++|+++.+++ ++.+++...... +..-+| ..+.. ++..+ ..+..
T Consensus 182 ~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~-----~l~~~~~~~~~~~g~~~s~-~~a~l----~~~~l--~tl~~ 249 (366)
T PRK08247 182 RPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQ-----ELCERLAYYQNAAGAVLSP-FDSWL----LIRGM--KTLAL 249 (366)
T ss_pred CchhcCCcEEEeecceeccCCCceeeeEEecChH-----HHHHHHHHHHHhcCCCCCh-HHHHH----HHhcc--CcHHH
Confidence 2333 6899999999999876 6799988743 565554432211 111111 11111 22222 23456
Q ss_pred HHHHHHHHHHHHHHHHHh-cCcEE-ecCCCCCceEEEccCCCCCcHHHHHHhHhcC---CeEEcCC------CCCCCCC-
Q 009673 375 YQNKVVSNCRALASRLVE-LGYKL-VSGGSDNHLVLVDLRPMGIDGARVEKILDMA---SITLNKN------SVPGDKS- 442 (529)
Q Consensus 375 ~~~~i~~~a~~l~~~L~~-~G~~v-~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~---GI~v~~~------~~Pg~~~- 442 (529)
++++..+|++.+.+.|++ .++.. ..++. ..++.+.+. + .+...++++.. .+.++-+ ..|+...
T Consensus 250 r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~-gg~~sf~~~--~--~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~ 324 (366)
T PRK08247 250 RMRQHEENAKAIAAFLNEQPGVTDVLYPGR-GGMLSFRLQ--D--EEWVNPFLKSLKLITFAESLGGVESFITYPATQTH 324 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeEEecCCc-CcEEEEEEC--C--HHHHHHHHHcCCcceEccCCCCCceEEECCccccc
Confidence 677789999999999998 47664 33422 234444553 1 23333333321 2222211 0344221
Q ss_pred -----------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 443 -----------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 443 -----------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
...++-+|++.. -||.+.+.+-|.+++.
T Consensus 325 ~~~~~~~r~~~gi~~~~~R~svG--------lE~~~dl~~dl~~al~ 363 (366)
T PRK08247 325 ADIPEEIRIANGVCNRLLRFSVG--------IENVEDLIADLKQAFK 363 (366)
T ss_pred ccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHh
Confidence 112345888754 3677888777777775
No 219
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.81 E-value=2.5e-18 Score=180.59 Aligned_cols=217 Identities=17% Similarity=0.189 Sum_probs=151.5
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+++| +.+++++|.+. .+.+.||+.|+..++.++++|||+|++.+..|++.+.. ....+...|
T Consensus 68 ~~p~~~~le----~~lA~l~g~~~-----al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~----~~~~~~~~G 134 (403)
T PRK07810 68 GNPTVSMFE----ERLRLIEGAEA-----CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVV----CNEILPRWG 134 (403)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHH----HHHHHHHcC
Confidence 345577777 67889999874 36679999999999999999999999988666554321 111122334
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. +++.++. .|++++++++++ ++++|++++|+||+ ..|+++|+++|+++|++|++|++|..+...
T Consensus 135 ~--~v~~vd~------~d~~~l~~ai~~-~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~----- 200 (403)
T PRK07810 135 V--ETVFVDG------EDLSQWEEALSV-PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQ----- 200 (403)
T ss_pred c--EEEEECC------CCHHHHHHhcCc-CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccC-----
Confidence 4 5555542 389999999987 89999999898887 779999999999999999999998766432
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
.++. ++|++++|+||++.|.. ||+++++++ .+.+++..... ..|.......+++ +++.+ ..+..+
T Consensus 201 ~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~-----~~~~~l~~~~~--~~g~~~s~~~a~l--~l~~L--~tl~~R 269 (403)
T PRK07810 201 RGLPLGADVVVYSGTKHIDGQGRVLGGAILGDRE-----YIDGPVQKLMR--HTGPALSAFNAWV--LLKGL--ETLALR 269 (403)
T ss_pred ChhhcCCcEEEccCCceecCCcCceeEEEEeChH-----HHHHHHHHHHH--HhCCCCCHHHHHH--HHhcc--CcHHHH
Confidence 2333 78999999999997643 599988873 23323332111 1122112222222 23332 235678
Q ss_pred HHHHHHHHHHHHHHHHh-cCcE
Q 009673 376 QNKVVSNCRALASRLVE-LGYK 396 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~-~G~~ 396 (529)
.++..+|+..+.+.|++ +++.
T Consensus 270 ~~~~~~~a~~~a~~L~~~p~v~ 291 (403)
T PRK07810 270 VRHSNASALRIAEFLEGHPAVR 291 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCcc
Confidence 88999999999999987 3443
No 220
>PRK08354 putative aminotransferase; Provisional
Probab=99.81 E-value=1.3e-17 Score=169.78 Aligned_cols=291 Identities=15% Similarity=0.107 Sum_probs=173.5
Q ss_pred cceeEecCCCC-CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HH
Q 009673 103 KSLELIASENF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 180 (529)
Q Consensus 103 ~~i~L~asen~-~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A 180 (529)
+.|+|..++|+ .|+.+.+++...+.. . .+||. ...+ ++++++++|. +|.+|+|+ +|
T Consensus 9 ~~i~l~~~~np~~p~~~~~a~~~~~~~-~-~~yp~---------~~~l----~~~ia~~~~~-------~I~vt~G~~~a 66 (311)
T PRK08354 9 GLIDFSASVNPYPPEWLDEMFERAKEI-S-GRYTY---------YEWL----EEEFSKLFGE-------PIVITAGITEA 66 (311)
T ss_pred ceeEecCCCCCCCCHHHHHHHHHHHHH-h-hcCCC---------hHHH----HHHHHHHHCC-------CEEECCCHHHH
Confidence 45888888876 477888888765432 1 23442 1233 3667777773 45678988 88
Q ss_pred HHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 009673 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (529)
Q Consensus 181 ~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s 260 (529)
+..++. ++.|||+|++++|.|.++. ..+...|. +++.+ .+|++.+++.++ +++++++++|
T Consensus 67 l~~~~~-~~~~gd~vlv~~P~y~~~~--------~~~~~~g~--~~~~~-------~~d~~~l~~~~~--~~~~vi~~~P 126 (311)
T PRK08354 67 LYLIGI-LALRDRKVIIPRHTYGEYE--------RVARFFAA--RIIKG-------PNDPEKLEELVE--RNSVVFFCNP 126 (311)
T ss_pred HHHHHH-hhCCCCeEEEeCCCcHHHH--------HHHHHcCC--EEeec-------CCCHHHHHHhhc--CCCEEEEecC
Confidence 776664 4459999999999876542 12334454 44443 367889988875 4678888889
Q ss_pred CCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccc--cCCCCeEEEeeCCCcch
Q 009673 261 AYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 333 (529)
Q Consensus 261 ~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~ 333 (529)
+||+ .. .+++|.++|+++|+++|+|+++ .++...+.... ..--+++.|++|++ +|+|.||+++..
T Consensus 127 ~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y-~~f~~~~~~~~--~~~vi~~~S~SK~~~l~GlRiG~~v~~~----- 198 (311)
T PRK08354 127 NNPDGKFYNFKELKPLLDAVEDRNALLILDEAF-IDFVKKPESPE--GENIIKLRTFTKSYGLPGIRVGYVKGFE----- 198 (311)
T ss_pred CCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcc-hhccccccccC--CCcEEEEeccHhhcCCccceeeeeeehH-----
Confidence 9997 33 4677778889999999999984 45444321111 12247889999986 799999999833
Q ss_pred hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEccC
Q 009673 334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR 412 (529)
Q Consensus 334 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~ 412 (529)
+...++. .+...+ ..+.+++. ++.. .+++ ++.++.+.+.+..+.. +.....+ +..++++++.
T Consensus 199 -~~l~~~~---~~~~~~---~~~~~~~~-~~~~---~~~~----~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~ 261 (311)
T PRK08354 199 -EAFRSVR---MPWSIG---STGYAFLE-FLIE---DDFE----HLRKTMPLIWREKERFEKALYVKS--DANFFIKDVG 261 (311)
T ss_pred -HHHHHcC---CCccCC---HHHHHHHH-HHHH---hHHH----HHHHHHHHHHHHHHHHHHhcCCCC--CCcEEEEECC
Confidence 3323222 121111 12222222 2221 1221 2222222222222221 1111122 2344556553
Q ss_pred CCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 413 PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 413 ~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
+..++.+.|.++||.+.. |.... .++++||++. ..++.+++.+.++++
T Consensus 262 ----~~~~~~~~l~~~gv~v~~----g~~f~-~~~~iRi~~~-------~~~~~~~l~~al~~~ 309 (311)
T PRK08354 262 ----DAEKFVEFLKRNGILVRD----CTSFG-LPGYIRFSVR-------DREENEKLIRALREW 309 (311)
T ss_pred ----CHHHHHHHHHHCCeEEEe----cccCC-CCCeEEEEeC-------CHHHHHHHHHHHHHh
Confidence 356677788889999954 43321 2579999964 257788888888764
No 221
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=5.2e-18 Score=177.85 Aligned_cols=213 Identities=20% Similarity=0.218 Sum_probs=149.9
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+++| +++++++|.+. .|.++||++|+..++.++++|||+|++.++.|++...... ..+...|
T Consensus 62 ~~p~~~~le----~~lA~l~g~~~-----~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~----~~~~~~G 128 (398)
T PRK08249 62 TNPTVQAFE----EKVRILEGAEA-----ATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFT----EFLPRMG 128 (398)
T ss_pred CChHHHHHH----HHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHH----HHHhhCC
Confidence 456667777 67889999865 3667999999999999999999999999998865421110 0112234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. ++..++ ..|++++++++++ ++|+|+++.|+||+ ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 129 i--~v~~vd------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~-----~ 194 (398)
T PRK08249 129 V--DVTLCE------TGDHEQIEAEIAK-GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPIN-----Q 194 (398)
T ss_pred e--EEEEcC------CCCHHHHHHhcCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCcccc-----C
Confidence 3 544433 3689999999987 89999999898887 78999999999999999999999765432 1
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
.++. ++|++++|+||++.|+. ||++++++ ++.+++..... ..|.......+.+ +++.+ ..+..+
T Consensus 195 ~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~------~l~~~l~~~~~--~~g~~~s~~~a~l--~l~~l--~tL~~R 262 (398)
T PRK08249 195 NPLALGADLVIHSATKFLSGHADALGGVVCGSK------ELMEQVYHYRE--INGATMDPMSAYL--ILRGM--KTLKLR 262 (398)
T ss_pred CchhhCCCEEeccCceecCCCCCceEEEEECCH------HHHHHHHHHHH--hcCCCCCHHHHHH--HHhCc--chHHHH
Confidence 2333 78999999999997653 48888765 66665543221 1122111122222 22222 234567
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 009673 376 QNKVVSNCRALASRLVEL 393 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~~ 393 (529)
+++..+|++.+.+.|++.
T Consensus 263 ~~~~~~na~~la~~L~~~ 280 (398)
T PRK08249 263 VRQQQESAMALAKYLQTH 280 (398)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 788899999999999873
No 222
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.81 E-value=1.4e-17 Score=176.01 Aligned_cols=316 Identities=18% Similarity=0.207 Sum_probs=194.1
Q ss_pred CCCCCcHHHHHHHhhhhhccCCC-CCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh
Q 009673 110 SENFTSRAVMEAVGSCLTNKYSE-GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (529)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~-G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al 188 (529)
+-.++|+.|++++...+.+ |.. .|.-.....| ...+.+| +.+++++|.+.. +.++||+.|+..++.+
T Consensus 89 g~s~l~~~vieAv~~~~~~-y~~l~~~l~~g~~g-~r~~~le----~~lA~l~gae~a-----lvv~sg~aAi~l~l~~- 156 (454)
T TIGR00474 89 GRAPLAEEAIEAVTDAARG-YSNLEYDLETGKRG-SRYSHVE----GLLCELTGAEDA-----LVVNNNAAAVLLALNT- 156 (454)
T ss_pred CCCCCCHHHHHHHHHHHhc-ccchhccccccccc-hHHHHHH----HHHHHHhCCCcE-----EEECCHHHHHHHHHHH-
Confidence 3446799999999877753 321 1100000112 2234444 788999999863 3458899999888754
Q ss_pred cCCCCEEEEcCCCC---CccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-
Q 009673 189 LKPHDRIMGLDLPH---GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR- 264 (529)
Q Consensus 189 l~pGD~Vl~~~~~~---~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~- 264 (529)
+.+||+|++.+.+| |+.+... ..+...|. +++.++.+ ...|++++++++++ +|++|++.+++|++
T Consensus 157 l~~GdeVIvs~~e~v~~ggs~~i~-----~~~~~~G~--~~~~v~~~---~~~~l~dle~aI~~-~T~lv~~~h~sN~~~ 225 (454)
T TIGR00474 157 LAKGKEVIVSRGELVEIGGSFRIP-----DVMEQSGA--KLVEVGTT---NRTHLKDYEDAITE-NTALLLKVHTSNYRI 225 (454)
T ss_pred hCCcCEEEECCChhhhhcchhhHH-----HHHHHcCC--EEEEeCCC---CCCCHHHHHHhcCc-CCEEEEEEccCcccc
Confidence 68999999988653 3322210 11233454 56665543 34689999999987 89998877655542
Q ss_pred -----CCCHHHHHHHHHHhCCEEEEecccccccccc----cc--cC---CCCC-cccEEEecccccccCCCCeEEEeeCC
Q 009673 265 -----DFDYPRMRQIADAVGALLMMDMAHISGLVAA----SV--VA---DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (529)
Q Consensus 265 -----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~----~~--~~---~~~~-~aDiv~~S~hK~l~GprgG~i~~~~~ 329 (529)
..|+++|+++|++||+++++|.+ +|.+.. +. .+ .+.. ++|++++|.||+|.||.+|++++++
T Consensus 226 ~G~~~~~dl~~I~~la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~- 302 (454)
T TIGR00474 226 VGFTEEVSIAELVALGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKK- 302 (454)
T ss_pred cCCCCCCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECH-
Confidence 57999999999999999999974 454311 11 11 1222 7999999999999999999999987
Q ss_pred CcchhHHHhhhcccccCC-CCCCChHHHHHHHHHHHHHhcCch--H---------HHHHHHHHHHHHHHHHHHHh---cC
Q 009673 330 PVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPE--F---------KVYQNKVVSNCRALASRLVE---LG 394 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~--~---------~~~~~~i~~~a~~l~~~L~~---~G 394 (529)
++.+++......- +. ..-..++++...+.....+. + ....++..+++..+.+.|.+ .|
T Consensus 303 -----~~i~~l~~~~l~r~lr--~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~ 375 (454)
T TIGR00474 303 -----ELIERLKKNPLTRALR--VDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPG 375 (454)
T ss_pred -----HHHHhhhhchhHHHHh--hChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCC
Confidence 5655544321100 00 00113344444554433221 0 12234777889999999977 33
Q ss_pred c--EEec------CCCC--C--ceEEEccCCCCCcHHHHHHhHhcCC--eEEcCCCCCCCCCCCCCCeEEEccCCCccCC
Q 009673 395 Y--KLVS------GGSD--N--HLVLVDLRPMGIDGARVEKILDMAS--ITLNKNSVPGDKSALVPGGIRIGSPAMTTRG 460 (529)
Q Consensus 395 ~--~v~~------~gt~--~--~~~~v~~~~~~i~~~~~~~~L~~~G--I~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g 460 (529)
+ .+.. +|+- . .-.-+.+.+.+.+..++++.|++.. |.... ..+.+.+-. |.
T Consensus 376 ~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~~lr~~~~~ii~r~----------~~~~~~ld~-----r~ 440 (454)
T TIGR00474 376 FELEIVPGLSQVGGGSLPDERLPSYAVTLTPDGLSAEKLEARLRELPPPIIGRI----------EDDRFLLDL-----RT 440 (454)
T ss_pred ceEEEEEcCCcccCCCCcCCCCCeEEEEEecCCCCHHHHHHHHhcCCCCEEEEE----------ECCEEEEEe-----Cc
Confidence 3 3332 2221 1 1123345555667888999998766 44321 134454432 45
Q ss_pred CCHHHHHHHHHHH
Q 009673 461 FSEKEFVAIADFI 473 (529)
Q Consensus 461 ~~~~d~~~la~~i 473 (529)
+.++|++.+++.|
T Consensus 441 ~~~~~~~~~~~~~ 453 (454)
T TIGR00474 441 LLEDEEELLIEAL 453 (454)
T ss_pred CCHHHHHHHHHHh
Confidence 7789999998876
No 223
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=6.1e-18 Score=177.15 Aligned_cols=213 Identities=20% Similarity=0.183 Sum_probs=150.5
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+++| +++++++|.+. .+.++||+.|+.+++. ++++||+|+++++.|++.+.... ..+...|
T Consensus 52 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~----~~~~~~G 117 (390)
T PRK08064 52 GNPTREALE----DIIAELEGGTK-----GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMIT----EVLSRFG 117 (390)
T ss_pred CChhHHHHH----HHHHHHhCCCC-----eEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHH----HHHHHcC
Confidence 455667777 77889999874 3556999998887776 78999999999998876542111 1122234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. +++.+++ .|++++++.+++ ++++|++++|+||+ ..|+++|.++|+++|+++++|+++..+.. .
T Consensus 118 ~--~v~~v~~------~d~~~l~~~l~~-~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~-----~ 183 (390)
T PRK08064 118 I--EHTFVDM------TNLEEVAQNIKP-NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLL-----Q 183 (390)
T ss_pred C--EEEEECC------CCHHHHHHhcCC-CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccc-----c
Confidence 4 5555443 278999999987 89999999999887 78999999999999999999999765432 2
Q ss_pred CCCC-cccEEEecccccccCCCC---eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPRG---GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gprg---G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
.+++ ++|+++.|+||++.|+.+ |+++++++ ++.++++....+. |......-+.+ +++.+ ..+..+
T Consensus 184 ~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~-----~~~~~l~~~~~~~--g~~~~~~~a~l--~~~gl--~tl~~R 252 (390)
T PRK08064 184 KPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDE-----ELAQKLYFLQNSF--GAVLGVQDCWL--VLRGL--KTLHVR 252 (390)
T ss_pred CchhhCCcEEEeecceeccCCccceeEEEEeCCH-----HHHHHHHHHHHhc--CCCCCHHHHHH--HHccc--CcHHHH
Confidence 2333 689999999999988764 88887653 6666665443321 22111111221 22222 224577
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 009673 376 QNKVVSNCRALASRLVEL 393 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~~ 393 (529)
.++..+|+..+.+.|++.
T Consensus 253 ~~~~~~~a~~la~~L~~~ 270 (390)
T PRK08064 253 LEHSSETANKIALYLQEH 270 (390)
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 888899999999999884
No 224
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.80 E-value=3.7e-18 Score=162.64 Aligned_cols=326 Identities=21% Similarity=0.236 Sum_probs=219.0
Q ss_pred eeEecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCCchhH-HHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 009673 105 LELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYI-DELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (529)
Q Consensus 105 i~L~asen~~----~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~-d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~ 179 (529)
|.+.-.+||+ .|+|.+|-...+ ..|..|..+.|+..|.+.+ ..+| ..++++.+.+. .+...++-.
T Consensus 69 ilnFcaNnYLGLsshPeii~a~~~al-eeyGaGlssvrfIcGtq~iHk~LE----~kiAqfh~rED-----~ilypscfd 138 (417)
T KOG1359|consen 69 ILNFCANNYLGLSSHPEIINAGQKAL-EEYGAGLSSVRFICGTQDIHKLLE----SKIAQFHGRED-----TILYPSCFD 138 (417)
T ss_pred eeeecccccccccCChHHHHHHHHHH-HHhCCCccceeEEecchHHHHHHH----HHHHHHhCCCc-----eEEeccccc
Confidence 4444556664 689999988766 5688888889998887644 4566 66788888775 355678889
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhh---hcCCcEEE
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI---LFRPKLII 256 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~---~~~pklIi 256 (529)
||..++-++++|.|-|+...+.|.+.+ +| +++.. .-..+|+-+++..+. +.|-|+|+
T Consensus 139 ANag~feail~pedAvfSDeLNhASII-dG-------irLck------------ry~h~dv~~l~~~l~~a~k~r~klv~ 198 (417)
T KOG1359|consen 139 ANAGAFEAILTPEDAVFSDELNHASII-DG-------IRLCK------------RYRHVDVFDLEHCLISACKMRLKLVV 198 (417)
T ss_pred cchHHHHHhcChhhhhhccccccchhh-hh-------hHHHh------------hhccchhHHHHHHHHHhhhheEEEEE
Confidence 999999999999999998888775543 22 22221 113455555554332 23667776
Q ss_pred Ec--CCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccc---cc--cCCCCCcccEEEecccccccCCCCeEEEeeCC
Q 009673 257 AG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SV--VADPFKYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (529)
Q Consensus 257 ~~--~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~---~~--~~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~ 329 (529)
.. .|..+...|+++|.+++++||++|++|++|..|.... |. ........|++.+++.|.+.|-.|||+.+++
T Consensus 199 TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp~- 277 (417)
T KOG1359|consen 199 TDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGPK- 277 (417)
T ss_pred ecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCCh-
Confidence 65 4555668899999999999999999999999887643 11 1122235789999999999999999999998
Q ss_pred CcchhHHHhhhcccccCCCCCCChHHHHHHHH-HHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce-E
Q 009673 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLA-VCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL-V 407 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala-~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~-~ 407 (529)
.+.+.++...-|++.++...+.+.+.+ .++..++.. .....+...+.+++++.+...||.+... +|. .
T Consensus 278 -----~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s--~~~i~~~~a~~qrfr~~me~aGftIsg~---~hPI~ 347 (417)
T KOG1359|consen 278 -----PLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVS--SKEIQSRQANTQRFREFMEAAGFTISGA---SHPIC 347 (417)
T ss_pred -----hHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHhcCceecCC---CCCcc
Confidence 677777665556654443332222222 233333221 3445667778888999988899998652 342 2
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.+-+..... ...+.+.|.+.||.|-.-+.|- .|-++..||+-..+. ++++|++++.+++.++.+
T Consensus 348 pv~lGda~l-A~~~ad~lLk~Gi~Vigfs~Pv--VP~gkariRVqiSAa----Ht~edid~~i~Af~~vgr 411 (417)
T KOG1359|consen 348 PVMLGDARL-ASKMADELLKRGIYVIGFSYPV--VPKGKARIRVQISAA----HTEEDIDRLIEAFSEVGR 411 (417)
T ss_pred ceecccHHH-HHHHHHHHHhcCceEEeecCCc--CCCCceEEEEEEehh----cCHHHHHHHHHHHHHHHH
Confidence 222222111 2345566667899985433332 233456789877665 459999999999988765
No 225
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.80 E-value=4.3e-18 Score=176.38 Aligned_cols=228 Identities=16% Similarity=0.205 Sum_probs=153.0
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+++| +.++++.|.+. -+..+||++|+.+++ .+++|||+|+++.+.+++.... +. .....+
T Consensus 52 ~~p~~~~le----~~lA~leg~~~-----~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~-~~----~~~~~~ 116 (364)
T PRK07269 52 KNPTRAKLE----ETLAAIESADY-----ALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRW-FN----QQEKEG 116 (364)
T ss_pred CCccHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHH-HH----HHHhcC
Confidence 345677888 67788888764 255678889999888 4679999999998877654311 00 000000
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
.+. + ++..|++++++.+++ ++|+|++++|+||+ ..|+++|+++|+++|+++++|++++.++. .
T Consensus 117 -~~~-----~---~~~~d~~~l~~~i~~-~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~-----~ 181 (364)
T PRK07269 117 -RFH-----F---TYANTEEELIAAIEE-DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIY-----Q 181 (364)
T ss_pred -cEE-----E---EecCCHHHHHHhcCc-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 011 1 234689999999987 89999999999987 67999999999999999999999665432 2
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
.|++ ++|++++|+||++.|+. ||+|+++++ ++.+++..... ..|......-++ .++..+ ..+..+
T Consensus 182 ~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~-----~l~~~~~~~~~--~~G~~~s~~~a~--l~~~~L--~tL~~r 250 (364)
T PRK07269 182 RPIELGADIVLHSATKYLSGHNDVLAGVVVTNDL-----ELYEKLFYNLN--TTGAVLSPFDSY--LLMRGL--KTLSLR 250 (364)
T ss_pred CchhhCCcEEEecCceeccCCCcccceEEEeCcH-----HHHHHHHHHHH--HhCCCCCHHHHH--HHHcCC--CcHHHH
Confidence 4555 79999999999998755 699888764 56665543211 112211111222 223333 235778
Q ss_pred HHHHHHHHHHHHHHHHhc-Cc-EEecCCCCCceEEEcc
Q 009673 376 QNKVVSNCRALASRLVEL-GY-KLVSGGSDNHLVLVDL 411 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~~-G~-~v~~~gt~~~~~~v~~ 411 (529)
+++..+|+..+.+.|++. ++ .+..++. ..++.+.+
T Consensus 251 ~~~~~~na~~~a~~L~~~p~v~~v~ypg~-gg~~sf~~ 287 (364)
T PRK07269 251 MERSTANAQEVVAFLKKSPAVKEVLYTGK-GGMISFKV 287 (364)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEeCCCc-CcEEEEEE
Confidence 889999999999999874 44 3443432 23444444
No 226
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=8.3e-18 Score=176.20 Aligned_cols=291 Identities=17% Similarity=0.114 Sum_probs=188.1
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+++| +++++++|.+. .+...||++|+..++.++++|||+|+++++.|++...... ......|
T Consensus 63 ~~pt~~~Le----~~lA~l~g~~~-----~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~----~~~~~~G 129 (394)
T PRK07050 63 ATPTSLALA----QRLAEIEGGRH-----ALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGE----WLARDFG 129 (394)
T ss_pred CCHHHHHHH----HHHHHHhCCCe-----EEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHH----HHHHhcC
Confidence 566677777 67888999764 2445777899999999999999999999998875432110 0112234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. ++..++.. |.+++++.+++ ++|+|++++|+||+ ..|+++|+++|+++|+++++|++|..+...
T Consensus 130 i--~v~~vd~~------~~~~l~~~i~~-~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~----- 195 (394)
T PRK07050 130 I--TVRFYDPL------IGAGIADLIQP-NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAF----- 195 (394)
T ss_pred e--EEEEECCC------CHHHHHHhcCC-CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccccccc-----
Confidence 3 55554421 45788888887 89999999998886 679999999999999999999998776542
Q ss_pred CCCC-cccEEEecccccccCC---CCeEEEeeCCCcchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (529)
.|+. ++|+++.|++|++.|. .||+++++++ ++.+++..... .|. +.. ...+ ..+++.+ ..+..
T Consensus 196 ~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~-----~~~~~~~~~~~~~G~--~~~--~~~a-~l~lr~l--~tl~~ 263 (394)
T PRK07050 196 KPFEHGVDISVQALTKYQSGGSDVLMGATITADA-----ELHAKLKLARMRLGI--GVS--ADDC-SLVLRGL--PSLQV 263 (394)
T ss_pred CHHHcCCeEEEEECCceecCCCCeeEEEEEECCH-----HHHHHHHHHHHhcCC--CCC--HHHH-HHHHcCC--CcHHH
Confidence 3333 6899999999999654 3788887664 67666653322 121 111 1111 1233322 24566
Q ss_pred HHHHHHHHHHHHHHHHHhc-CcE-EecCC---------------CCCceEEEccCCCCC---cHHHHHHhHhcCCeEEcC
Q 009673 375 YQNKVVSNCRALASRLVEL-GYK-LVSGG---------------SDNHLVLVDLRPMGI---DGARVEKILDMASITLNK 434 (529)
Q Consensus 375 ~~~~i~~~a~~l~~~L~~~-G~~-v~~~g---------------t~~~~~~v~~~~~~i---~~~~~~~~L~~~GI~v~~ 434 (529)
++++..+|+..+.+.|.+. ++. +..++ ...+++.+.+.. +. +...+.+.|+..++.++.
T Consensus 264 Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~-~~~~~~~~~~~~~l~~~~~~~s~ 342 (394)
T PRK07050 264 RLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDE-RYSPAQVDAFVEALELFAIGWSW 342 (394)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC-CCCHHHHHHHHHcCCCCeecccc
Confidence 7888999999999999873 443 22111 112344444532 22 234456666667776654
Q ss_pred CC-----CCCCC---C----CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 435 NS-----VPGDK---S----ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 435 ~~-----~Pg~~---~----~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
+. .|... . ....+-|||++. -||.+.+.+-|.+++...
T Consensus 343 G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svG--------lE~~~dl~~dl~~al~~~ 392 (394)
T PRK07050 343 GGACSLAMPYDVASMRTAKWPHRGTLVRLYIG--------LEDEADLIADLEQALEAA 392 (394)
T ss_pred CCccceEeeCcccccchhhcCCCCCEEEEEeC--------cCCHHHHHHHHHHHHHHh
Confidence 32 12210 0 112256999864 367888888887777643
No 227
>PLN02452 phosphoserine transaminase
Probab=99.80 E-value=2.9e-17 Score=169.56 Aligned_cols=334 Identities=15% Similarity=0.135 Sum_probs=214.4
Q ss_pred cceeEecCCCCCcHHHHHHHhhhhhccCCCCC--CCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHH
Q 009673 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGL--PGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (529)
Q Consensus 103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~--p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A 180 (529)
..+++++++..+|+.|++++...+.+--..|. .. -...+.++.+.++ .+++.++++++++.+ +.+.+...+||.+
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~-~sHRs~~f~~i~~-~~~~~L~~l~~~p~~-y~v~~l~Gsgt~~ 83 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVME-MSHRGKEFLSIIQ-KAEADLRELLDIPDN-YEVLFLQGGASTQ 83 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccc-cCCCchHHHHHHH-HHHHHHHHHhCCCCC-ceEEEEeCccHHH
Confidence 35789999999999999999988654322222 11 1122345555444 567999999998543 4455556778899
Q ss_pred HHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 009673 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (529)
Q Consensus 181 ~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s 260 (529)
+.+++..++.+||++++..- |.++..+. +.+...|........+-......+|+++++. .+ +.+.|.+++.
T Consensus 84 ~ea~~~nl~~~~~~~l~~~~---G~fg~r~~---~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~v~~~hn 154 (365)
T PLN02452 84 FAAIPLNLCKPGDKADFVVT---GSWSKKAA---KEAKKYCKTNVIASGKDEKYTKIPSVSEWEL--TP-DAKFVHICAN 154 (365)
T ss_pred HHHHHHhcCCCCCeEEEEEC---CHHHHHHH---HHHHHhCCCcEEEecCCCCCCCCCChHHcCC--CC-CCcEEEECCC
Confidence 99999999999999998863 33332221 1112233211111111011112567776521 22 4677777654
Q ss_pred CCC--C-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHH
Q 009673 261 AYP--R-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (529)
Q Consensus 261 ~~p--~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l 336 (529)
..+ . ..|++++. ++++++|+++.+|....+ +...++..+|.||+| ||.| |++++++ ++
T Consensus 155 ETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~pid-----v~~~~v~~~saqK~l-GP~Gl~~v~vr~------~~ 216 (365)
T PLN02452 155 ETIHGVEFKDYPDVG------NVPLVADMSSNFLSKPVD-----VSKYGVIYAGAQKNV-GPSGVTIVIIRK------DL 216 (365)
T ss_pred CCCCcEecCcccccC------CCeEEEECCccccCcccC-----HHHcCEEEEeccccc-CCCCeEEEEEcH------HH
Confidence 433 3 35666553 389999999887765333 222345557999998 7998 9999988 44
Q ss_pred Hhhhcccc---c--------CCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHh-cCcEEe-cC-C
Q 009673 337 ESAINNAV---F--------PGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVE-LGYKLV-SG-G 401 (529)
Q Consensus 337 ~~~i~~~~---~--------p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~-~G~~v~-~~-g 401 (529)
.+++.... + ....+||+.+.+.++..+|+.+... +++.+.++..++++.+.+.|.+ .|+... .+ .
T Consensus 217 l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~ 296 (365)
T PLN02452 217 IGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKS 296 (365)
T ss_pred HhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChH
Confidence 43332110 0 0123699999999999999988765 6899999999999999999988 577211 11 1
Q ss_pred CCCc-eEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 402 SDNH-LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 402 t~~~-~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
..+. .+.+.+.... ..+++.+.++++|+.. ++|+.+ -+++|+|+- . .++.++++.+++++++.-+
T Consensus 297 ~rs~~~vsF~~~~~~-~~~~f~~~~~~~g~~~----~~G~r~---~gg~R~s~y--n--a~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 297 VRSLMNVPFTLGGSE-LEAEFVKEAAKAGMVQ----LKGHRS---VGGMRASIY--N--AMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred HhCCeEEEEEcCCch-hHHHHHHHHHHCCCcc----cCCccc---cCceEEECc--C--CCCHHHHHHHHHHHHHHHH
Confidence 1122 2233333322 3466888899999998 677753 346999863 2 3678999999999987654
No 228
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.80 E-value=6.4e-17 Score=180.94 Aligned_cols=308 Identities=20% Similarity=0.213 Sum_probs=200.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC--------CCCEEEEcCCCCCcccccccccccccccc
Q 009673 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--------PHDRIMGLDLPHGGHLSHGFMTPKRRVSG 219 (529)
Q Consensus 148 ~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--------pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~ 219 (529)
+++...++|+++++|.+. +.+++.+|+.|+++.++++-. ..++|++++-.|+.+.. ....
T Consensus 530 q~i~elq~~l~eltGmd~----~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPa--------sa~~ 597 (939)
T TIGR00461 530 ELIAQLEKWLCSITGFDA----ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPA--------SAAM 597 (939)
T ss_pred HHHHHHHHHHHHHHCCCC----cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHH--------HHHH
Confidence 334445699999999995 578889999888876666532 33578888877765532 1234
Q ss_pred ccceEEEEEcccCCCCCCCCHHHHHHHhhh--cCCcEEEEcCCCCCC-CCC-HHHHHHHHHHhCCEEEEecccccccccc
Q 009673 220 TSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPR-DFD-YPRMRQIADAVGALLMMDMAHISGLVAA 295 (529)
Q Consensus 220 ~g~~~~~v~~~v~~~~~~iD~d~le~~i~~--~~pklIi~~~s~~p~-~~d-~~~i~~ia~~~g~~livD~ah~~Gli~~ 295 (529)
.|. +++.++.+ +++.+|+++|++++++ .++++|++.++++.+ ..| +++|+++|+++|.++++|+||..++...
T Consensus 598 ~G~--~Vv~V~~d-~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l 674 (939)
T TIGR00461 598 AGM--QVVPVNCD-QDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGL 674 (939)
T ss_pred CCC--EEEEeccC-CCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCCCC
Confidence 454 77777776 5789999999999985 378888888766544 444 9999999999999999999986654422
Q ss_pred cccCCCCC-cccEEEeccccccc-----CCCC-eEEEeeCCCc---chhHHHhhhcc---cc-cCCCCCCChHHH-H-HH
Q 009673 296 SVVADPFK-YCDVVTTTTHKSLR-----GPRG-GMIFFKKDPV---LGVELESAINN---AV-FPGLQGGPHNHT-I-GG 359 (529)
Q Consensus 296 ~~~~~~~~-~aDiv~~S~hK~l~-----Gprg-G~i~~~~~~~---~~~~l~~~i~~---~~-~p~~~g~p~~~~-i-aa 359 (529)
..|-+ ++|++++|.||+|. |++| |++.+++... ....+.+..+. -. .......+..+. + ..
T Consensus 675 ---~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~ 751 (939)
T TIGR00461 675 ---TSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPI 751 (939)
T ss_pred ---CCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHH
Confidence 12322 79999999999986 5555 8999987320 00001000000 00 000000011111 1 12
Q ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC---CCceEEEccCC----CCCcHHHHHHhHhcCCeEE
Q 009673 360 LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS---DNHLVLVDLRP----MGIDGARVEKILDMASITL 432 (529)
Q Consensus 360 la~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt---~~~~~~v~~~~----~~i~~~~~~~~L~~~GI~v 432 (529)
.++.+..+..+++++..++...|++++.++|.+ +++++.++. ..|-+++++++ .+++..++.+.|.+.|+..
T Consensus 752 a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~ha 830 (939)
T TIGR00461 752 SWMYIKMMGNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHA 830 (939)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeec
Confidence 223455566677888899999999999999987 677766432 23556777764 2466788999999999985
Q ss_pred cCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 009673 433 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAK 484 (529)
Q Consensus 433 ~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~~ 484 (529)
...+.| ..+.+=|.... .-+.+|++++++++..+.....++.
T Consensus 831 pt~~~p------v~g~lmiepTE----~eskeelD~f~~al~~I~~e~~~~~ 872 (939)
T TIGR00461 831 PTLSFP------VPGTLMVEPTE----SESLEELDRFCDAMIAIKEEINALV 872 (939)
T ss_pred cccCCc------cCCeEEEEeec----cCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 332222 22333232222 2458999999999988877665543
No 229
>PLN02880 tyrosine decarboxylase
Probab=99.80 E-value=2.3e-17 Score=176.93 Aligned_cols=313 Identities=14% Similarity=0.106 Sum_probs=193.7
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCC----ceeeecCChHHHHHHHHHhhcC----------CCC-EEEEcCCCCCccccc
Q 009673 144 EYIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAILK----------PHD-RIMGLDLPHGGHLSH 208 (529)
Q Consensus 144 ~~~d~lE~~a~~~la~~~g~~~~~~----~~~V~~~sGs~A~~~~l~all~----------pGD-~Vl~~~~~~~g~~s~ 208 (529)
+...++|+.+.+|+++++|.+...+ +.-+..++||+||+.++.+..+ ... .|++.+- +|++.
T Consensus 118 p~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~---aH~Sv 194 (490)
T PLN02880 118 PAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQ---THSAL 194 (490)
T ss_pred cccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCC---chHHH
Confidence 3466899999999999999986422 1123345667999887765321 112 2333332 34432
Q ss_pred cccccccccccccceE-EEEEcccCC-CCCCCCHHHHHHHhhhc-----CCcEEEEc--CCCCCCCCCHHHHHHHHHHhC
Q 009673 209 GFMTPKRRVSGTSIYF-ESMPYRLDE-STGLVDYDMLEKTAILF-----RPKLIIAG--ASAYPRDFDYPRMRQIADAVG 279 (529)
Q Consensus 209 g~~~~~~~i~~~g~~~-~~v~~~v~~-~~~~iD~d~le~~i~~~-----~pklIi~~--~s~~p~~~d~~~i~~ia~~~g 279 (529)
. |.+...|.+. .++.+++|. +++.+|+++|++.|.+. .|-+|+.+ .++.+...|+++|+++|++||
T Consensus 195 ~-----Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~ 269 (490)
T PLN02880 195 Q-----KACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNG 269 (490)
T ss_pred H-----HHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcC
Confidence 2 3556666542 234455653 35799999999999753 25566654 344445889999999999999
Q ss_pred CEEEEecccccccccccccC---CCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh-------cccc----
Q 009673 280 ALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI-------NNAV---- 344 (529)
Q Consensus 280 ~~livD~ah~~Gli~~~~~~---~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i-------~~~~---- 344 (529)
+|++||+||+.+......+. ..++.+|.++.++|||+..|.+ |++++++.. .+...+ ....
T Consensus 270 iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~----~l~~~~~~~~~Yl~~~~~~~~ 345 (490)
T PLN02880 270 MWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRN----ALIQSLSTNPEFLKNKASQAN 345 (490)
T ss_pred CEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHH----HHHHHHccCHHHhcCcccccc
Confidence 99999999776644322211 1234689999999999999998 999988631 111111 1000
Q ss_pred ----cC--CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEEEccCCCCCc
Q 009673 345 ----FP--GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRPMGID 417 (529)
Q Consensus 345 ----~p--~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~~~~~i~ 417 (529)
+. ..+.+.... ...++..++....+++.++.++..+.++++.+.|++ .+++++.+. +..++.+.+.+.+.+
T Consensus 346 ~~~~~~~~~i~~~rr~~-alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~-~~~iv~Fr~~~~~~~ 423 (490)
T PLN02880 346 SVVDYKDWQIPLGRRFR-SLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPR-IFSLVCFRLVPPKNN 423 (490)
T ss_pred CCCChhccCcCCCCccc-HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-ceEEEEEEEeCCCCC
Confidence 00 011111111 224445666666667788888888999999999977 689988753 233444444433222
Q ss_pred H-------HHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 418 G-------ARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 418 ~-------~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
. ..+.+.| ++..+.+....+. +..++|+++.... .+++|++.+.+.|.++...
T Consensus 424 ~~~~~~~n~~l~~~l~~~g~~~v~~t~~~------g~~~lR~~~~n~~---tt~~di~~~~~~i~~~~~~ 484 (490)
T PLN02880 424 EDNGNKLNHDLLDAVNSSGKIFISHTVLS------GKYVLRFAVGAPL---TEERHVTAAWKVLQDEASK 484 (490)
T ss_pred hhhHHHHHHHHHHHHHhCCCEEEEEEEEC------CEEEEEEEecCCC---CCHHHHHHHHHHHHHHHHH
Confidence 1 2243444 3455666543332 2458999864333 4589999999999887653
No 230
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.80 E-value=9.5e-18 Score=175.21 Aligned_cols=212 Identities=21% Similarity=0.251 Sum_probs=147.7
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
++..+++| +.+++++|.+. + +...||++|+.+++.++++|||+|++.++.|++.+... ...+...|.
T Consensus 53 ~p~~~~le----~~la~l~g~~~----~-~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~----~~~~~~~g~ 119 (380)
T TIGR01325 53 NPTVAAFE----ERIAALEGAER----A-VATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFI----SEILPRFGI 119 (380)
T ss_pred CchHHHHH----HHHHHHhCCCc----E-EEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHH----HHHHHHhCC
Confidence 45566777 67888999864 2 45689999999999999999999999887776543211 011222343
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~ 300 (529)
++..++. .|++++++.+++ ++++|++..++||+ ..|+++|.++|+++|+++++|+++..+.. ..
T Consensus 120 --~v~~v~~------~d~~~l~~~i~~-~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~-----~~ 185 (380)
T TIGR01325 120 --EVSFVDP------TDLNAWEAAVKP-NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVL-----QQ 185 (380)
T ss_pred --EEEEECC------CCHHHHHHhcCC-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-----CC
Confidence 5555443 278999998877 89999999888876 77999999999999999999999765432 23
Q ss_pred CCC-cccEEEecccccccCC--C-CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHH
Q 009673 301 PFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (529)
Q Consensus 301 ~~~-~aDiv~~S~hK~l~Gp--r-gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~ 376 (529)
|++ ++|++++|+||++.|+ + ||++++++ ++.+.+...... .|+... ...+ +.+++.+ ..+..+.
T Consensus 186 pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~------~~~~~l~~~~~~--~g~~~~-p~~a-~~~l~~l--~tl~~r~ 253 (380)
T TIGR01325 186 PLKLGADVVVYSATKHIDGQGRVMGGVIAGSE------ELMAEVAVYLRH--TGPAMS-PFNA-WVLLKGL--ETLSLRM 253 (380)
T ss_pred chhhCCCEEEeeccceecCCCCeEEEEEEeCH------HHHHHHHHHHHh--hCCCCC-HHHH-HHHHhcc--CcHHHHH
Confidence 444 6899999999999775 2 48888877 555555432211 121111 1111 1233322 2345678
Q ss_pred HHHHHHHHHHHHHHHhc
Q 009673 377 NKVVSNCRALASRLVEL 393 (529)
Q Consensus 377 ~~i~~~a~~l~~~L~~~ 393 (529)
++..++++.+.+.|++.
T Consensus 254 ~~~~~~a~~la~~L~~~ 270 (380)
T TIGR01325 254 QKQFDSALAIAEWLQAQ 270 (380)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 88999999999999884
No 231
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.79 E-value=4.4e-17 Score=175.20 Aligned_cols=307 Identities=18% Similarity=0.166 Sum_probs=191.2
Q ss_pred hhHHHHHHHHHHHHHHHcCCCC------------CCCceeeecCChHHHHHHHHHhh----cC-----------------
Q 009673 144 EYIDELETLCQKRALAAFNLDE------------NKWGVNVQPLSGSPANFEVYTAI----LK----------------- 190 (529)
Q Consensus 144 ~~~d~lE~~a~~~la~~~g~~~------------~~~~~~V~~~sGs~A~~~~l~al----l~----------------- 190 (529)
+...++|+.+.+|++++++..+ ..++ +..++||+||+.++.+- ++
T Consensus 125 pa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G--~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~ 202 (522)
T TIGR03799 125 KAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLG--AFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAAL 202 (522)
T ss_pred cchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCe--EEcCchHHHHHHHHHHHHHHhccccccccccccccchhhh
Confidence 4467899999999999985321 1222 33466779999877653 21
Q ss_pred -----CCCEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEEEc---
Q 009673 191 -----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAG--- 258 (529)
Q Consensus 191 -----pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~~~~iD~d~le~~i~~---~~pklIi~~--- 258 (529)
+++.|++.+.+|.+. . +.....|.+ .+++.+++| +++.+|+++|++.+++ .+++.+++.
T Consensus 203 ~~~~~~~~~v~~S~~~H~S~---~-----kaa~~lglg~~~v~~vp~d-~~g~~d~~~L~~~i~~~~~~g~~~~~vvata 273 (522)
T TIGR03799 203 KHYGYDGLAILVSERGHYSL---G-----KAADVLGIGRDNLIAIKTD-ANNRIDVDALRDKCAELAEQNIKPLAIVGVA 273 (522)
T ss_pred hhccCCceEEEECCCchHHH---H-----HHHHHcCCCcccEEEEEeC-CCCcCCHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 134566666555432 1 233344432 145566676 5689999999999863 134433322
Q ss_pred -CCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccC---CCCCcccEEEecccccccCCCC-eEEEeeCCCcch
Q 009673 259 -ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG 333 (529)
Q Consensus 259 -~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~---~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~ 333 (529)
.+..+...|+++|+++|+++|+|+++|+||+.+....+.+. ..++++|.+++++|||+.+|.| |+++++++
T Consensus 274 Gtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~---- 349 (522)
T TIGR03799 274 GTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDP---- 349 (522)
T ss_pred cCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCH----
Confidence 23344589999999999999999999999775544332211 1123689999999999999999 99999874
Q ss_pred hHHHhhhccc---c---------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecC
Q 009673 334 VELESAINNA---V---------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSG 400 (529)
Q Consensus 334 ~~l~~~i~~~---~---------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~ 400 (529)
++.+.+... . ...++|+.....+ .++.+++.+...+++++.++..+.++++.+.|++ .+++++.+
T Consensus 350 -~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al-~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~ 427 (522)
T TIGR03799 350 -ALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAM-LVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTE 427 (522)
T ss_pred -HHHHHhccCcchhcCCCCCccccceeecCcchHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecC
Confidence 333322210 0 0123455554443 5778888888788999999999999999999987 58999875
Q ss_pred CCCCceEEEccCCCCC-------------------cH--HHHHHhHhcCCeE-EcCCCCCCCC-CCCCCCeEEEcc-CCC
Q 009673 401 GSDNHLVLVDLRPMGI-------------------DG--ARVEKILDMASIT-LNKNSVPGDK-SALVPGGIRIGS-PAM 456 (529)
Q Consensus 401 gt~~~~~~v~~~~~~i-------------------~~--~~~~~~L~~~GI~-v~~~~~Pg~~-~~~~~~~iRig~-~~~ 456 (529)
.. -+++.+.+.+.++ +. ..+.+.+.+.|.. ++...+.+.. .....-.+|+.+ ...
T Consensus 428 p~-l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~ 506 (522)
T TIGR03799 428 PE-LCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPL 506 (522)
T ss_pred CC-ccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCC
Confidence 32 2333333333221 10 2355556566654 4332222111 001124599865 333
Q ss_pred ccCCCCHHHHHHHHHH
Q 009673 457 TTRGFSEKEFVAIADF 472 (529)
Q Consensus 457 tt~g~~~~d~~~la~~ 472 (529)
| +++|++.+.+-
T Consensus 507 t----t~~~i~~~l~~ 518 (522)
T TIGR03799 507 T----THEILQDILDE 518 (522)
T ss_pred C----CHHHHHHHHHH
Confidence 3 47888877653
No 232
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.79 E-value=5.7e-17 Score=170.83 Aligned_cols=317 Identities=14% Similarity=0.070 Sum_probs=190.6
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--- 190 (529)
-.|.|.+++...+.. +..+.+ .+. ++...++| ++++++++.+. .+..+||++|+..++..+..
T Consensus 58 ~~~~i~~a~~~~~~~-~~~~~~---~~~-~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~al~~a~~~~~ 123 (401)
T PRK00854 58 CHPKILAAMVEQAGR-LTLTSR---AFR-NDQLAPLY----EELAALTGSHK-----VLPMNSGAEAVETAIKAVRKWGY 123 (401)
T ss_pred CCHHHHHHHHHHHhh-cccccc---ccC-CHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 378888888877743 332222 111 23344444 67788888653 35568999999999987742
Q ss_pred ------CC-CEEEEcCCCC-Cccccccccccccccc---cccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 191 ------PH-DRIMGLDLPH-GGHLSHGFMTPKRRVS---GTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 191 ------pG-D~Vl~~~~~~-~g~~s~g~~~~~~~i~---~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
+| ++|++.+-.+ |.... .......... +......+..++ ..|++++++.+.+ ++++|++++
T Consensus 124 ~~~g~~~~~~~vi~~~~~~HG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~i~~-~~~aii~e~ 195 (401)
T PRK00854 124 EVKGVPEGQAEIIVCADNFHGRTLS-IVGFSTDPDARGGFGPFTPGFRVVP------FGDAEALEAAITP-NTVAFLVEP 195 (401)
T ss_pred hccCCCCCCceEEEECCCcCCccHH-HHhccCCccccccCCCCCCCeEEeC------CCCHHHHHHHhCC-CeEEEEEcc
Confidence 24 6787776543 32110 0000000000 000000111111 2589999999987 899999998
Q ss_pred CCCCC--CCC----HHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEecccccccC--CCCeEEEeeC
Q 009673 260 SAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLRG--PRGGMIFFKK 328 (529)
Q Consensus 260 s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l~G--prgG~i~~~~ 328 (529)
+.+++ ..+ +++|+++|++||+++|+|++|. |+...+.. ..... ..|+++++ |++.| +++|++++++
T Consensus 196 ~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~ 272 (401)
T PRK00854 196 IQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-GLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSNS 272 (401)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCchHhHHhhcCCCCCEEEec--ccccCCccCeEEEEEcH
Confidence 77764 343 9999999999999999999985 54332210 00111 36887764 99843 5789999988
Q ss_pred CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC-CCCCceE
Q 009673 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG-GSDNHLV 407 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~-gt~~~~~ 407 (529)
++.+.+.........+++.. ..++...+|+.+... ...+++.++.+++.+.|++.+...+.. .....++
T Consensus 273 ------~~~~~l~~~~~~~t~~~~~~-~~aa~~a~L~~l~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~ 342 (401)
T PRK00854 273 ------EVLGVLKPGQHGSTFGGNPL-ACAVARAALKVLTEE---GMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLML 342 (401)
T ss_pred ------HHHhcccCCCCCCCCCcCHH-HHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHhhccCceEEEeccceEE
Confidence 66666653322223344333 334444467654322 245777778888999998865432211 1123444
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.+.+.....+..++.+.|.+.||.+.. ...+.||++.+.. ++++|++++++.|++++.
T Consensus 343 ~i~~~~~~~~~~~~~~~L~~~GV~v~~---------~~~~~lR~~p~~~----~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 343 AVELEPEAGGARQYCEALKERGLLAKD---------THDHTIRLAPPLV----ITREQVDWALEQIAKVLA 400 (401)
T ss_pred EEEEecCchhHHHHHHHHHHCCeEEec---------CCCCEEEEeCCcc----cCHHHHHHHHHHHHHHhh
Confidence 444433223456777888888999842 1246899987643 468999999999988763
No 233
>PRK06460 hypothetical protein; Provisional
Probab=99.79 E-value=3.1e-17 Score=170.99 Aligned_cols=213 Identities=17% Similarity=0.166 Sum_probs=145.5
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+++| +.+++++|.+. .+.+++|++|+..++.++++|||+|+++++.+++.+.. +...+...|
T Consensus 43 ~~p~~~~L~----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~----~~~~~~~~G 109 (376)
T PRK06460 43 ANPTVLELT----KKIVELENAEM-----GVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRF----FTDYLKNWG 109 (376)
T ss_pred CCccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHH----HHHHHHhhC
Confidence 344556666 67889999875 24458999999999999999999999988766543221 111223345
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. ++..++.+ +.+.+++.+++ ++|+|++++++||+ ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 110 ~--~v~~~~~~------~~~~l~~~~~~-~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~-----~ 175 (376)
T PRK06460 110 V--NVDASNPG------SDNIIEKAKSK-RYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPIN-----Q 175 (376)
T ss_pred c--EEEEECCC------CHHHHHHhcCC-CceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcccc-----C
Confidence 4 44444432 23445555554 89999999999987 78999999999999999999999764421 1
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
.++. ++|+++.|+||++.|++ +|++++++ ++.+++.....+...+ ... ..+. .+++. ...++.+
T Consensus 176 ~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~------~l~~~l~~~~~~~g~~-~~~--~~a~-~~l~~--~~~l~~r 243 (376)
T PRK06460 176 KPLELGADIVVHSASKFLAGHNDVIAGLAAGYG------KLLNVIDQMRRTLGTS-LDP--HAAY-LTLRG--IKTLKIR 243 (376)
T ss_pred ChhhcCCCEEEeecceeccCCCCceEEEEecCH------HHHHHHHHHHHhcCCC-CCH--HHHH-HHHhc--hhhHHHH
Confidence 2232 58999999999998875 69998877 6766665433222111 111 2221 22322 1345678
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 009673 376 QNKVVSNCRALASRLVEL 393 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~~ 393 (529)
++++.+|++.+.+.|++.
T Consensus 244 ~~~~~~n~~~l~~~L~~~ 261 (376)
T PRK06460 244 MDVINRNAEQIAEFLEGH 261 (376)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 889999999999999873
No 234
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.79 E-value=4.8e-17 Score=170.81 Aligned_cols=307 Identities=15% Similarity=0.195 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhc--C-CCCEEEEcCCCCCcccccccccccccccccc
Q 009673 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL--K-PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 146 ~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all--~-pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
.-.+.....+++++++|++.... -+.+.+|| .++.+++.++- + +||+|+++...|.+.. +++.+.|
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~--a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~--------kAi~~~G 172 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKS--AFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCI--------KAISTAG 172 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCE--EEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHH--------HHHHHcC
Confidence 44455555688999999983221 23346777 57777777764 2 6999999886543321 4566777
Q ss_pred ceEEEEEcc--cCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCC-CC--CCCCHHHHHHHHHHhCCEEEEeccccccccc
Q 009673 222 IYFESMPYR--LDESTGLVDYDMLEKTAILF--RPKLIIAGASA-YP--RDFDYPRMRQIADAVGALLMMDMAHISGLVA 294 (529)
Q Consensus 222 ~~~~~v~~~--v~~~~~~iD~d~le~~i~~~--~pklIi~~~s~-~p--~~~d~~~i~~ia~~~g~~livD~ah~~Gli~ 294 (529)
. +++.++ ++++++.+|+++|+++|++. +..++++++++ ++ ...|+++|.++|++||+|+|+|+||..+...
T Consensus 173 ~--~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~ 250 (444)
T TIGR03531 173 F--EPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNK 250 (444)
T ss_pred C--eEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChh
Confidence 6 666666 45667999999999999863 33555565554 32 3689999999999999999999998754432
Q ss_pred ccccC-CCCC--cccEEEecccccccCCC-CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCc
Q 009673 295 ASVVA-DPFK--YCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSP 370 (529)
Q Consensus 295 ~~~~~-~~~~--~aDiv~~S~hK~l~Gpr-gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~ 370 (529)
..... ..+. .+|++++|+||++..|- ||+++++++ ++.+.+... .++... ...... ++.++......
T Consensus 251 ~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~-----el~~~i~~~-y~g~~~--~s~~~~-~~~~ll~~G~~ 321 (444)
T TIGR03531 251 YMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDE-----NFIQEISKS-YPGRAS--ASPSLD-VLITLLSLGSK 321 (444)
T ss_pred hhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCH-----HHHHHHHHh-ccCCCC--ChHHHH-HHHHHHHhCHH
Confidence 11111 1122 37999999999986654 467777664 677766653 233221 112222 23344445556
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh----cCcEEecCCCCCceEE-EccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCCCCC
Q 009673 371 EFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSDNHLVL-VDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSAL 444 (529)
Q Consensus 371 ~~~~~~~~i~~~a~~l~~~L~~----~G~~v~~~gt~~~~~~-v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~ 444 (529)
+++++.++..++++++.+.|.+ .|..++.- ..|.+.+ +.+... +-+...+-..|-..+|.-.....||+....
T Consensus 322 g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~-~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~ 400 (444)
T TIGR03531 322 GYLELLKERKEMYKYLKELLQKLAERHGERLLDT-PENPISSAMTLSTLKGKDPTMLGSMLYSRRVTGPRVVTNGDSKTV 400 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecC-CCCceeEEEecccccccCHHHHHHHHHhCCCCCceeecCCCceEE
Confidence 7899999999999999999876 46776642 2344332 223211 223445555565555532211134442111
Q ss_pred CCCeEEE---c-------cCCCc---cCCCCHHHHHHHHHHHHHH
Q 009673 445 VPGGIRI---G-------SPAMT---TRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 445 ~~~~iRi---g-------~~~~t---t~g~~~~d~~~la~~i~~~ 476 (529)
++..+ | +|++| .-|++++|++.+++.++++
T Consensus 401 --~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 401 --GGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred --CCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 12222 1 12333 3589999999999988764
No 235
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.79 E-value=2.3e-17 Score=172.17 Aligned_cols=213 Identities=22% Similarity=0.231 Sum_probs=146.2
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+++| +.++++.|.+. + +...+|++|+..++.++++|||+|+++++.|++.+.... ......+
T Consensus 49 ~~p~~~~le----~~lA~l~g~~~----v-~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~----~~~~~~~ 115 (382)
T TIGR02080 49 GNPTRDLLQ----QALAELEGGAG----A-VVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLN----ALAKKGC 115 (382)
T ss_pred CCchHHHHH----HHHHHHhCCCc----E-EEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHH----HHHhhcC
Confidence 445566777 67888888542 2 344566699999999999999999999998876432110 0001112
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
.++..+ + ..|++++++++++ ++|+|+++.|+||+ ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 116 --~~v~~~--d----~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~-----~ 181 (382)
T TIGR02080 116 --FRVLFV--D----QGDEQALRAALAQ-KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPAL-----Q 181 (382)
T ss_pred --eEEEEE--C----CCCHHHHHHhcCc-CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 233332 2 2488999999987 89999999999987 78999999999999999999999866543 2
Q ss_pred CCCC-cccEEEecccccccCC---CCeEEEeeCCCcchhHHHhhhcccc-cCCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (529)
.++. ++|++++|+||++.|+ ++|++++++. ++.+++.... ..+...+|. -+. .+++.+ ..+..
T Consensus 182 ~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~-----~~~~~l~~~~~~~g~~~sp~---~a~--l~lr~l--~tl~~ 249 (382)
T TIGR02080 182 NPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDP-----QVAEELAWWANNLGVTGGAF---DSY--LTLRGL--RTLVA 249 (382)
T ss_pred CchhhCCCEEEeecceeccCCCCceeEEEEeCCH-----HHHHHHHHHHHccCCCCCHH---HHH--HHHccc--chHHH
Confidence 2343 6899999999999775 4698888654 5666554322 112222222 111 123332 23456
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 009673 375 YQNKVVSNCRALASRLVEL 393 (529)
Q Consensus 375 ~~~~i~~~a~~l~~~L~~~ 393 (529)
++++..+|+..+.+.|++.
T Consensus 250 R~~~~~~na~~~a~~L~~~ 268 (382)
T TIGR02080 250 RMRLQQRNAQAIVEYLQTQ 268 (382)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 6888899999999999873
No 236
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=2.4e-17 Score=171.69 Aligned_cols=212 Identities=15% Similarity=0.109 Sum_probs=144.5
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
++..+.+| +.++++.|.+. + +...||++|+..++.++++|||+|+++++.|++..... .......|.
T Consensus 60 npt~~~Le----~~iA~le~~~~----~-~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~----~~~l~~~Gi 126 (394)
T PRK09028 60 TPTHFAFQ----AAIVELEGGAG----T-ALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLC----DKILKGFGI 126 (394)
T ss_pred CchHHHHH----HHHHHHhCCCc----E-EEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHH----HHhhhhcce
Confidence 44456666 56677777653 2 44578889999999999999999999998876543210 001112333
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~ 300 (529)
++..++. .|.+.+++.+++ ++|+|++++++||+ ..|+++|+++|+++|+++++|++|..+.. ..
T Consensus 127 --~v~~v~~------~~~e~l~~~l~~-~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~-----~~ 192 (394)
T PRK09028 127 --ETTYYDP------MIGEGIRELIRP-NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN-----SR 192 (394)
T ss_pred --EEEEECC------CCHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc-----CC
Confidence 4434332 246789998877 89999999999997 67999999999999999999999876532 34
Q ss_pred CCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHH
Q 009673 301 PFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (529)
Q Consensus 301 ~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~ 376 (529)
|++ ++|+++.|.|||+.|+. +|+++.++ ++.+++..... ..|.... ...+. ..++.+ .-+.-++
T Consensus 193 Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~------~~~~~l~~~~~--~~G~~~~-p~~a~-l~~rgl--~TL~lR~ 260 (394)
T PRK09028 193 PFEMGVDISIQAATKYIVGHSDVMLGTATANE------KHWDQLREHSY--LMGQCTS-PDDVY-LAMRGL--RTLGVRL 260 (394)
T ss_pred ccccCceEEEEeCCeEecCCCCEEEEEEECCH------HHHHHHHHHHH--hcCCCCC-HHHHH-HHHccc--CcHHHHH
Confidence 555 79999999999998885 47776555 45444432211 1122111 11111 123322 2356778
Q ss_pred HHHHHHHHHHHHHHHhc
Q 009673 377 NKVVSNCRALASRLVEL 393 (529)
Q Consensus 377 ~~i~~~a~~l~~~L~~~ 393 (529)
++..+|+..+++.|++.
T Consensus 261 ~~~~~na~~la~~L~~~ 277 (394)
T PRK09028 261 AQHEKNALKVANWLATR 277 (394)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 99999999999999884
No 237
>PLN02509 cystathionine beta-lyase
Probab=99.78 E-value=2.9e-17 Score=174.11 Aligned_cols=215 Identities=21% Similarity=0.208 Sum_probs=145.7
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
|++..+.+| +++++++|.+. .+.++||+.|+.+ +..+++|||+|+++++.|+++..... ..+...|
T Consensus 131 gnpt~~aLE----~~lA~leg~e~-----ai~~~SG~aAi~~-il~ll~~GD~VI~~~~~y~~t~~ll~----~~l~~~G 196 (464)
T PLN02509 131 GNPTRDALE----SLLAKLDKADR-----AFCFTSGMAALSA-VTHLIKNGEEIVAGDDVYGGSDRLLS----QVVPRSG 196 (464)
T ss_pred CCHHHHHHH----HHHHHHhCCCE-----EEEeCcHHHHHHH-HHHHhCCCCEEEEcCCchhhHHHHHH----HHHHHCC
Confidence 667777777 67788888664 2556888887754 44679999999999988765421000 0112234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. +++.++ ..|++++++.+++ ++|+|++++++||+ ..|+++|+++|+++|+++++|++|..+...
T Consensus 197 ~--~v~~vd------~~d~e~l~~ai~~-~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~----- 262 (464)
T PLN02509 197 V--VVKRVN------TTNLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLS----- 262 (464)
T ss_pred e--EEEEeC------CCCHHHHHHhCCc-CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccC-----
Confidence 3 555543 2478999999987 89999999998886 779999999999999999999998776542
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
.++. ++|++++|+||++.|+. ||+++++++ .+.+.+...... .|+......++ ..++.+ ..+..+
T Consensus 263 ~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~-----~l~~~~~~~~~~--~g~~l~p~~A~--l~lr~L--~tL~~R 331 (464)
T PLN02509 263 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-----KLAKEVYFLQNS--EGSGLAPFDCW--LCLRGI--KTMALR 331 (464)
T ss_pred ChhhcCCcEEEecCcccccCCCccceeEEEeccH-----HHHHHHHHHHHh--cCCCcCHHHHH--HHHhhh--hhHHHH
Confidence 2343 79999999999998865 588887663 343333211110 11111111121 123322 234677
Q ss_pred HHHHHHHHHHHHHHHHh-cCc
Q 009673 376 QNKVVSNCRALASRLVE-LGY 395 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~-~G~ 395 (529)
+++..+++..+.+.|++ +.+
T Consensus 332 ~~r~~~nA~~la~~L~~~p~V 352 (464)
T PLN02509 332 IEKQQENARKIAMYLSSHPRV 352 (464)
T ss_pred HHHHHHHHHHHHHHHhcCCCc
Confidence 89999999999999987 344
No 238
>PRK07505 hypothetical protein; Provisional
Probab=99.78 E-value=3.5e-16 Score=164.87 Aligned_cols=331 Identities=15% Similarity=0.138 Sum_probs=189.1
Q ss_pred ceeEecCCCCC----cHHHHHHHhhhhhccCC-CCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673 104 SLELIASENFT----SRAVMEAVGSCLTNKYS-EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (529)
Q Consensus 104 ~i~L~asen~~----~~~V~eal~~~l~~~y~-~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs 178 (529)
.|++... +++ +|+|++|+...+. +|. .+....+.....+...+ ..+.+++++|. + .+..+||+
T Consensus 48 ~ld~~s~-~~lgl~~~p~v~~A~~~~l~-~~g~~~~~~~~~~~~~~~~~~----l~~~la~~~~~--~----~~~~~sG~ 115 (402)
T PRK07505 48 FVNFVSC-SYLGLDTHPAIIEGAVDALK-RTGSLHLSSSRTRVRSQILKD----LEEALSELFGA--S----VLTFTSCS 115 (402)
T ss_pred EEEeecC-CccCCCCCHHHHHHHHHHHH-HhCCCCCCccchhhhhHHHHH----HHHHHHHHhCC--C----EEEECChH
Confidence 4666543 343 8999999998875 342 11111221112233333 34788889987 2 24457999
Q ss_pred HHHHHHHHhh----cCCCC-EEEEcCC-CCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCC
Q 009673 179 PANFEVYTAI----LKPHD-RIMGLDL-PHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP 252 (529)
Q Consensus 179 ~A~~~~l~al----l~pGD-~Vl~~~~-~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~p 252 (529)
+|+..++..+ ..+|+ .|++.+. .|++.. ++ ......+. +++.++. .|++++++++++ ++
T Consensus 116 ~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~--~~----~~~~~~~~--~v~~~~~------~d~~~l~~~~~~-~~ 180 (402)
T PRK07505 116 AAHLGILPLLASGHLTGGVPPHMVFDKNAHASLN--IL----KGICADET--EVETIDH------NDLDALEDICKT-NK 180 (402)
T ss_pred HHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHH--hh----hhhhhcCC--eEEEeCC------CCHHHHHHHHhc-CC
Confidence 9998777543 22343 2444443 333211 00 01111122 4445442 488999998876 67
Q ss_pred cEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccc-ccc-c---CCC--CCcccEEEecccccccCCCCeE
Q 009673 253 KLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVA-ASV-V---ADP--FKYCDVVTTTTHKSLRGPRGGM 323 (529)
Q Consensus 253 klIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~-~~~-~---~~~--~~~aDiv~~S~hK~l~GprgG~ 323 (529)
++++++.|++|+ ..++++|.++|+++|++||+|++|..+... .+. . ... .....++++|++|.++++ ||+
T Consensus 181 ~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~-Gg~ 259 (402)
T PRK07505 181 TVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS-GGV 259 (402)
T ss_pred CEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc-CeE
Confidence 888887777775 788999999999999999999998643221 111 0 011 112347788999998644 788
Q ss_pred EEeeCCCcchhHHHhhhcccccCCCC-CCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC
Q 009673 324 IFFKKDPVLGVELESAINNAVFPGLQ-GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 402 (529)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~~~p~~~-g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt 402 (529)
++..++ ++.+.+.....+... ++++...+++...+++....+.+.+..+++.++.+.+.+.+... ..+.
T Consensus 260 ~~~~~~-----~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~g~ 329 (402)
T PRK07505 260 IMLGDA-----EQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE-----QSGS 329 (402)
T ss_pred EEeCCH-----HHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----CCCC
Confidence 876432 666666553333332 34444556555556664444444555555555554443332211 1111
Q ss_pred CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 403 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 403 ~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
...+.++.+.. ..+...+.+.|.+.||.+.....|.. +.....|||+.+.. ++++|++++++.|++++..
T Consensus 330 ~~~i~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~p~~--~~~~~~lRi~~~~~----~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 330 FLPIRLIYIGD-EDTAIKAAKQLLDRGFYTSPVFFPVV--AKGRAGLRIMFRAS----HTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred CCCEEEEEeCC-HHHHHHHHHHHHHCCCeEeeecCCCC--CCCCceEEEecCcc----CCHHHHHHHHHHHHHHHHh
Confidence 11112222221 11245677788889999965433321 11236899987654 4589999999999988764
No 239
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=5.1e-17 Score=168.90 Aligned_cols=213 Identities=13% Similarity=0.069 Sum_probs=149.7
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
|++..+.+| ++++++-|.+. -+.+.||+.|+.+++.++++|||+|++.+..|++..... .......|
T Consensus 60 ~nPt~~~le----~~la~LEg~~~-----a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~----~~~l~~~G 126 (395)
T PRK08114 60 GTLTHFSLQ----EAMCELEGGAG-----CALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFC----SKILSKLG 126 (395)
T ss_pred CChhHHHHH----HHHHHHhCCCe-----EEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHH----HHHHHhcC
Confidence 677788888 67788888765 245688999999999999999999999887776543211 00111224
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhC--CEEEEecccccccccccc
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVG--ALLMMDMAHISGLVAASV 297 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g--~~livD~ah~~Gli~~~~ 297 (529)
. ++..++ ..|.+++++++++ ++|+|++..+.||+ ..|+++|+++|+++| +++++|+++..++.
T Consensus 127 i--~v~~vd------~~d~~~l~~~l~~-~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~---- 193 (395)
T PRK08114 127 V--TTTWFD------PLIGADIAKLIQP-NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL---- 193 (395)
T ss_pred c--EEEEEC------CCCHHHHHHhcCC-CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc----
Confidence 3 444543 2478999999987 89999999988887 789999999999985 99999999877654
Q ss_pred cCCCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHH
Q 009673 298 VADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (529)
Q Consensus 298 ~~~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~ 373 (529)
..|++ ++|+++.|.||++.|+. +|.++.++ ++.+.+..... ..|. ......+. ..++.+ .-+.
T Consensus 194 -~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~------~~~~~l~~~~~--~~G~-~~~p~~a~-l~~rgl--~TL~ 260 (395)
T PRK08114 194 -FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANA------RCWEQLRENSY--LMGQ-MVDADTAY-MTSRGL--RTLG 260 (395)
T ss_pred -cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCH------HHHHHHHHHHH--hccC-CCCHHHHH-HHHcCC--CcHH
Confidence 34454 79999999999999984 48777665 44444432211 1222 11111111 122322 2245
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 009673 374 VYQNKVVSNCRALASRLVEL 393 (529)
Q Consensus 374 ~~~~~i~~~a~~l~~~L~~~ 393 (529)
-++++..+|+..+++.|++.
T Consensus 261 lR~~~~~~na~~va~~L~~h 280 (395)
T PRK08114 261 VRLRQHEESSLKVAEWLAEH 280 (395)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 67899999999999999984
No 240
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.77 E-value=4.4e-17 Score=169.80 Aligned_cols=215 Identities=19% Similarity=0.175 Sum_probs=147.6
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+++| +.+++++|.+. .+.+.||+.|+..++ ++++|||+|+++++.|++.+.... ..+...|
T Consensus 48 ~~p~~~~Le----~~lA~l~g~~~-----~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~----~~~~~~G 113 (377)
T PRK07671 48 GNPTRAALE----ELIAVLEGGHA-----GFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMT----KVLNRFG 113 (377)
T ss_pred CChHHHHHH----HHHHHHhCCCc-----eEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHH----HHHhcCC
Confidence 456667777 67889999875 255689998877654 688999999999998765432110 0112234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. +++.++ ..|++++++++++ ++|+|++++|+||+ ..|+++|.++|+++|+++++|+++..+.. .
T Consensus 114 ~--~v~~v~------~~d~~~l~~ai~~-~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~-----~ 179 (377)
T PRK07671 114 I--EHTFVD------TSNLEEVEEAIRP-NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYW-----Q 179 (377)
T ss_pred e--EEEEEC------CCCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCcccc-----C
Confidence 3 555544 2489999999987 89999999999986 78999999999999999999999654322 2
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
.++. ++|++++|++|++.|+. +|+++++++ ++.+++...... .|+......+. .+++.+ ..+..+
T Consensus 180 ~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~-----~l~~~~~~~~~~--~g~~~~~~~a~--l~~~~l--~tl~~R 248 (377)
T PRK07671 180 SPISLGADIVLHSATKYLGGHSDVVAGLVVVNSP-----ELAEDLHFVQNS--TGGILGPQDSW--LLLRGL--KTLGIR 248 (377)
T ss_pred ChhhhCCeEEEecCcccccCCccceeEEEEeCcH-----HHHHHHHHHHHh--hcCCCCHHHHH--HHHcCc--ChHHHH
Confidence 3444 78999999999998875 588877664 566655432211 11111111111 123322 224567
Q ss_pred HHHHHHHHHHHHHHHHh-cCc
Q 009673 376 QNKVVSNCRALASRLVE-LGY 395 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~-~G~ 395 (529)
+++..+|+..+.+.|++ .++
T Consensus 249 ~~~~~~na~~la~~L~~~~~v 269 (377)
T PRK07671 249 MEEHETNSRAIAEFLNNHPAV 269 (377)
T ss_pred HHHHHHHHHHHHHHHHcCCCe
Confidence 88889999999999987 344
No 241
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=5.1e-17 Score=171.68 Aligned_cols=161 Identities=19% Similarity=0.181 Sum_probs=121.6
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+.+| +.+++++|.+. .|.++||+.|+.+++.+++++||+|++++..|++...... ..+...|
T Consensus 67 ~~pt~~~le----~~la~l~g~~~-----~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~----~~l~~~G 133 (437)
T PRK05613 67 TNPTVEALE----NRIASLEGGVH-----AVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFL----VTLNRLG 133 (437)
T ss_pred cChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHH----HHHHhcC
Confidence 456667777 77889999864 4667999999999999999999999999888877632110 0112234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
+++..++ ++ .|++++++.+++ ++++|++..+.||. ..|+++|+++|+++|+++++|++|..|.. .
T Consensus 134 --i~v~~vd-~~----~d~e~l~~~l~~-~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~-----~ 200 (437)
T PRK05613 134 --IEVTFVE-NP----DDPESWQAAVQP-NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL-----V 200 (437)
T ss_pred --eEEEEEC-CC----CCHHHHHHhCCc-cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc-----c
Confidence 3666654 22 289999999988 89999887776664 78999999999999999999999876643 2
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeC
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~ 328 (529)
.+++ ++|++++|+||+++|.. ||+++.+.
T Consensus 201 ~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~ 233 (437)
T PRK05613 201 RPLELGADVVVASLTKFYTGNGSGLGGVLIDGG 233 (437)
T ss_pred ChHHhCCCEEEeeccceecCCCcceeEEEEecC
Confidence 3344 79999999999997753 47776543
No 242
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.77 E-value=9.6e-17 Score=167.64 Aligned_cols=311 Identities=17% Similarity=0.144 Sum_probs=188.1
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh---cC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---LK 190 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al---l~ 190 (529)
.+|.|.+++...+... . ....+ |. .+...++| +++++++|.+. .+...||++|+..++.++ ..
T Consensus 44 ~~p~v~~a~~~~~~~~-~--~~~~~-~~-~~~~~~l~----~~la~~~g~~~-----~~~~~sg~~a~~~a~~~~~~~~~ 109 (379)
T TIGR00707 44 AHPKLVEALKEQLEKL-V--HVSNL-YY-TEPQEELA----EKLVEHSGADR-----VFFCNSGAEANEAALKLARKYTG 109 (379)
T ss_pred CCHHHHHHHHHHHhhc-c--ccccc-cC-CHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHhh
Confidence 4589999988766432 1 11112 22 23344444 78888999763 244577889999888755 22
Q ss_pred ----CCCEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC-C--CCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673 191 ----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST-G--LVDYDMLEKTAILFRPKLIIAGASAY 262 (529)
Q Consensus 191 ----pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~~-~--~iD~d~le~~i~~~~pklIi~~~s~~ 262 (529)
+||+|+++++.+.++..... ...+.. +.....++..+. . ..|++++++.+++ ++++|+++.+++
T Consensus 110 ~~~~~~~~vi~~~~~yh~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~p~~~ 181 (379)
T TIGR00707 110 DKGKEKKKIIAFENSFHGRTMGAL-------SATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDD-ETAAVIVEPIQG 181 (379)
T ss_pred ccCCCCCeEEEECCCcCCccHHHH-------HhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhh-CeeEEEEEcccc
Confidence 47999999987644321110 000100 000011121111 1 1289999999987 789999975554
Q ss_pred CC-C--C---CHHHHHHHHHHhCCEEEEecccccccccccccCCC---CC-cccEEEecccccc-cCCCCeEEEeeCCCc
Q 009673 263 PR-D--F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPV 331 (529)
Q Consensus 263 p~-~--~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~-~aDiv~~S~hK~l-~GprgG~i~~~~~~~ 331 (529)
++ . . ++++|.++|+++|+++++|++|. ++...+. ..+ .. ..|++ +++|++ +|+|.|++++++
T Consensus 182 ~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~-~~~~~~~~~~~d~~--t~sK~~~~G~riG~~~~~~--- 254 (379)
T TIGR00707 182 EGGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGK-FFAYEHYGIEPDII--TLAKGLGGGVPIGATLAKE--- 254 (379)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccch-hhhHHhcCCCCCEE--EEcccccCCcccEEEEEcH---
Confidence 43 2 2 37899999999999999999974 5433221 111 11 34665 468998 567889999987
Q ss_pred chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe-cC-CCCCceEEE
Q 009673 332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV-SG-GSDNHLVLV 409 (529)
Q Consensus 332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~-~~-gt~~~~~~v 409 (529)
++.+.+.........+. +...+++...+|+.+.. .++.+++.++++.+.+.|.+.+.... .. .....++++
T Consensus 255 ---~~~~~~~~~~~~~~~~~-~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~ 327 (379)
T TIGR00707 255 ---EVAEAFTPGDHGSTFGG-NPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGI 327 (379)
T ss_pred ---HHHhhhcCCCCCCCCCC-CHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHhhCCCCccccCceEEEE
Confidence 67777654322222333 33344444456765432 24567777788888888876433221 10 012345566
Q ss_pred ccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 410 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 410 ~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
.+.. +..++.+.|.+.||.+.. + ..+++||+.+.. .++++++++.+.|+++
T Consensus 328 ~~~~---~~~~~~~~l~~~Gv~v~~----~-----~~~~lRi~~~~~----~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 328 ELEA---PCKDIVKKALEKGLLVNC----A-----GPKVLRFLPPLI----ITKEEIDEAVSALEEA 378 (379)
T ss_pred EecC---cHHHHHHHHHHCCcEEee----C-----CCCEEEEECCCc----CCHHHHHHHHHHHHHh
Confidence 5542 356788889999999953 2 246899986543 3589999999999765
No 243
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.77 E-value=2.4e-17 Score=180.10 Aligned_cols=297 Identities=18% Similarity=0.153 Sum_probs=197.4
Q ss_pred HHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcc
Q 009673 152 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (529)
Q Consensus 152 ~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~ 230 (529)
.+++.++++||++...+ +++|| .+|.++++++++|||+||+...+|-+.+ |+ ++.++|+ .++++.
T Consensus 178 eAq~~AA~~fgAd~tyF-----lvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~-hg------aLiLsGa--~PVYl~ 243 (720)
T PRK13578 178 DAQKHAAKVFNADKTYF-----VLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNH-HG------ALIQAGA--TPVYLE 243 (720)
T ss_pred HHHHHHHHHhCCCceEE-----EeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH-HH------HHHHcCC--eEEEee
Confidence 35688999999998633 36777 8999999999999999999887665432 22 1345665 666543
Q ss_pred cCC-CC---CCCCHHH-----HHHHhhhc--------C-CcEEEEcCCCCCC-CCCHHHHHHH-HHHhCCEEEEeccccc
Q 009673 231 LDE-ST---GLVDYDM-----LEKTAILF--------R-PKLIIAGASAYPR-DFDYPRMRQI-ADAVGALLMMDMAHIS 290 (529)
Q Consensus 231 v~~-~~---~~iD~d~-----le~~i~~~--------~-pklIi~~~s~~p~-~~d~~~i~~i-a~~~g~~livD~ah~~ 290 (529)
-.. .. +.|+.+. |++++.++ + .+++++.+|+|-+ ..|++.|.++ ++.++ +|++|+||+.
T Consensus 244 P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhga 322 (720)
T PRK13578 244 TARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVG 322 (720)
T ss_pred ccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchh
Confidence 221 11 3456544 88888764 2 3888898888776 7799999998 68888 9999999987
Q ss_pred ccccccc----cCCCCC-ccc----EEEecccccccCCCC-eEEEeeCCCcch---hHHHhhhcccccCCCCCCChHHHH
Q 009673 291 GLVAASV----VADPFK-YCD----VVTTTTHKSLRGPRG-GMIFFKKDPVLG---VELESAINNAVFPGLQGGPHNHTI 357 (529)
Q Consensus 291 Gli~~~~----~~~~~~-~aD----iv~~S~hK~l~Gprg-G~i~~~~~~~~~---~~l~~~i~~~~~p~~~g~p~~~~i 357 (529)
.+.+.+. .++.+. ++| +++.|+||+|++... ++|..++..... +--.++++.+..-..+.+|++..+
T Consensus 323 h~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTSPsY~Lm 402 (720)
T PRK13578 323 YEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTSPFYPLF 402 (720)
T ss_pred hhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHHHHcCCChHHHHH
Confidence 6654332 112233 788 999999999988766 788776531000 000234554433334578999999
Q ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH-Hh-cCcEEecC---------------------------CC------
Q 009673 358 GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL-VE-LGYKLVSG---------------------------GS------ 402 (529)
Q Consensus 358 aala~al~~~~~~~~~~~~~~i~~~a~~l~~~L-~~-~G~~v~~~---------------------------gt------ 402 (529)
|++-+|...+.....++..++..+.+..+++.| +. .++.++.+ +.
T Consensus 403 ASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf~ 482 (720)
T PRK13578 403 AALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFE 482 (720)
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccccCccccccc
Confidence 999887666544344677778888888888888 43 46666521 00
Q ss_pred ---------CCceEEEccCCCCCc------------HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCC
Q 009673 403 ---------DNHLVLVDLRPMGID------------GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF 461 (529)
Q Consensus 403 ---------~~~~~~v~~~~~~i~------------~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~ 461 (529)
|.--+++.+ .|++ +..+.+.|++.||.+.+.. ...+=+ +.+.|.
T Consensus 483 ~~~~~~~~lDP~KltI~t--~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d---------~~~vL~----l~s~g~ 547 (720)
T PRK13578 483 GYAEDQYFVDPCKLLLTT--PGIDAETGEYEDFGIPATILANYLRENGIVPEKCD---------LNSILF----LLTPAE 547 (720)
T ss_pred cccccccccCCceEEEEc--CCcCcccccccccCccHHHHHHHHHHcCCEEEecC---------CCeEEE----EeCCCC
Confidence 111112222 2344 6889999977799997642 122222 444577
Q ss_pred CHHHHHHHHHHHHHHHH
Q 009673 462 SEKEFVAIADFIHEGVE 478 (529)
Q Consensus 462 ~~~d~~~la~~i~~~~~ 478 (529)
++++++++.+.|.+.-+
T Consensus 548 t~~~~~~Lv~aL~~f~~ 564 (720)
T PRK13578 548 DMAKLQQLVAMLARFEK 564 (720)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 89999999998887633
No 244
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.77 E-value=1.7e-16 Score=165.47 Aligned_cols=213 Identities=16% Similarity=0.128 Sum_probs=145.5
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++....+| ++++++.|.+. .+.++||+.|+.+++ ++++|||+|+++++.|++.+.... ..+...|
T Consensus 48 ~~p~~~~Le----~~la~l~g~~~-----al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~----~~~~~~g 113 (380)
T PRK06176 48 GNPTRFALE----ELIADLEGGVK-----GFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFD----KVLVKNG 113 (380)
T ss_pred CChhHHHHH----HHHHHHhCCCC-----EEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHH----HHHHhcC
Confidence 456677777 67889999876 255699999888655 578999999999988766542110 0112223
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
+++..++ ..|++++++.+++ ++++|++..|+||+ ..|+++|.++|+++|+++|+|+++..+.. .
T Consensus 114 --i~v~~vd------~~d~e~l~~ai~~-~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~-----~ 179 (380)
T PRK06176 114 --LSCTIID------TSDLSQIKKAIKP-NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYY-----Q 179 (380)
T ss_pred --eEEEEcC------CCCHHHHHHhcCc-CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence 3544443 2489999999987 89999999888886 77999999999999999999999765432 2
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
.|+. ++|++++|+||++.|+. ||+++.+++ ++.+++..... ..|.... ...+ ...++.+ ..+..+
T Consensus 180 ~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~-----~~~~~~~~~~~--~~G~~~~-~~~~-~l~~~gl--~tl~~R 248 (380)
T PRK06176 180 NPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNE-----ALAQEIAFFQN--AIGGVLG-PQDS-WLLQRGI--KTLGLR 248 (380)
T ss_pred CccccCCCEEEecCceeccCCccceeeEEEecHH-----HHHHHHHHHHH--HhcCCCC-HHHH-HHHHhcc--CcHHHH
Confidence 3444 79999999999998865 688888653 55555432211 1111000 0111 1111111 234567
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 009673 376 QNKVVSNCRALASRLVEL 393 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~~ 393 (529)
+++..+|+..+.+.|++.
T Consensus 249 ~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 249 MEAHQKNALCVAEFLEKH 266 (380)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 788889999999999873
No 245
>PRK05939 hypothetical protein; Provisional
Probab=99.77 E-value=8.1e-17 Score=168.72 Aligned_cols=157 Identities=17% Similarity=0.149 Sum_probs=121.8
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
|++.++.+| +.++++.|.+. .|.++||+.|+..++.++++|||+|+++++.|+++..... .+...|
T Consensus 45 g~p~~~~lE----~~la~leg~~~-----~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~-----~l~~~G 110 (397)
T PRK05939 45 GTPTTAALE----AKITKMEGGVG-----TVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFG-----TLRGLG 110 (397)
T ss_pred CCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHH-----HHHhcC
Confidence 677888888 67888999876 3567899999999999999999999999988877643211 122334
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. +++.+++ .|+|++++.+++ ++++|+++.++||+ ..|+++|+++|+++|+++++|++|..+...
T Consensus 111 ~--~v~~v~~------~d~e~l~~~l~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~~----- 176 (397)
T PRK05939 111 V--EVTMVDA------TDVQNVAAAIRP-NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWLF----- 176 (397)
T ss_pred C--EEEEECC------CCHHHHHHhCCC-CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccccccc-----
Confidence 4 5555543 389999999987 89999999888886 679999999999999999999998766421
Q ss_pred CCCC-cccEEEecccccccCCCC--eEEEe
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPRG--GMIFF 326 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gprg--G~i~~ 326 (529)
.+.. ++|+++.|+||++.|+.. |.++.
T Consensus 177 ~~~~~gaDivv~S~sK~~~g~g~~igg~v~ 206 (397)
T PRK05939 177 RPKDVGASLVINSLSKYIAGHGNALGGAVT 206 (397)
T ss_pred CccccCCEEEEecCeecccCCCCeEEEEEe
Confidence 2333 799999999999976432 44444
No 246
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=6.3e-17 Score=170.12 Aligned_cols=159 Identities=16% Similarity=0.194 Sum_probs=122.2
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
|++.++.+| +.++++.|... + |.+.||+.|+.+++.++++|||+|+++.+.|++..... ...+...|
T Consensus 59 ~nPtv~~lE----~~la~leg~~~----a-v~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~----~~~l~~~G 125 (432)
T PRK06702 59 GNPTLAAFE----QKLAELEGGVG----A-VATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLF----GVSLRKLG 125 (432)
T ss_pred CCcHHHHHH----HHHHHHhCCCc----E-EEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHH----HHHHHHCC
Confidence 457788888 67888999876 2 55789999999999999999999999998876543210 00123345
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. ++..++ ..+|+++++++|++ +||+|++..++||+ ..|+++|+++|+++|+++++|++.... ...
T Consensus 126 i--~v~~vd-----~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP-----~~~ 192 (432)
T PRK06702 126 I--DVTFFN-----PNLTADEIVALAND-KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATP-----YLC 192 (432)
T ss_pred C--EEEEEC-----CCCCHHHHHHhCCc-CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCch-----hhC
Confidence 4 555543 24789999999998 89999999888887 679999999999999999999984322 223
Q ss_pred CCCC-cccEEEecccccccCCCC---eEEEe
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPRG---GMIFF 326 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gprg---G~i~~ 326 (529)
.|++ ++||++.|++|++.|.-. |.++.
T Consensus 193 ~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~ 223 (432)
T PRK06702 193 QAFEHGANIIVHSTTKYIDGHASSLGGIVID 223 (432)
T ss_pred ChhhcCCCEEEEccccccCCCcceeceEEEe
Confidence 4565 799999999999977654 55553
No 247
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.77 E-value=8.4e-17 Score=167.21 Aligned_cols=282 Identities=18% Similarity=0.176 Sum_probs=172.0
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
++...++| +.++++++ .+ .|.++||+.|+..++.++++|||+|+++++.|++..... ...+...|
T Consensus 50 ~p~~~~Le----~~lA~l~~--~~----~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~----~~~l~~~G- 114 (366)
T PRK07582 50 NPTWRALE----AALGELEG--AE----ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALA----REYLAPLG- 114 (366)
T ss_pred CccHHHHH----HHHHHHcC--CC----EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHH----HHHHhcCe-
Confidence 34456666 55677772 22 466799999999999999999999999988765432110 00111234
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~ 300 (529)
.+++.++.+. . .+ .+.+ ++++|+++.|+||+ ..|+++|.++|+++|+++++|++|.... + ..
T Consensus 115 -~~v~~v~~~~-~----~~----~~~~-~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~---~--~~ 178 (366)
T PRK07582 115 -VTVREAPTAG-M----AE----AALA-GADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPL---G--QR 178 (366)
T ss_pred -EEEEEECCCC-h----HH----Hhcc-CceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcc---c--cC
Confidence 3666665431 1 11 2223 78999999999987 6799999999999999999999975321 1 12
Q ss_pred CCC-cccEEEecccccccCCCC---eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHH
Q 009673 301 PFK-YCDVVTTTTHKSLRGPRG---GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (529)
Q Consensus 301 ~~~-~aDiv~~S~hK~l~Gprg---G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~ 376 (529)
|++ ++|++++|+||+++|+.| |+++++++ ++.+++...... ....+.... +. .+++.+. .+..++
T Consensus 179 p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~-----~l~~~l~~~~~~-~g~~~~~~~-a~--l~~r~l~--tl~~R~ 247 (366)
T PRK07582 179 PLELGADLVVASDTKALTGHSDLLLGYVAGRDP-----ELMAAVERWRLL-AGAIPGPFE-AW--LAHRSLG--TLGLRF 247 (366)
T ss_pred chhcCCcEEEecccccccCCCCeeEEEEEcCcH-----HHHHHHHHHHHH-hCCCCCHHH-HH--HHHhccc--cHHHHH
Confidence 333 689999999999988764 99888653 566655432111 111122111 11 1222222 245667
Q ss_pred HHHHHHHHHHHHHHHh-cCcEE-ecCCC---------------CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCC
Q 009673 377 NKVVSNCRALASRLVE-LGYKL-VSGGS---------------DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPG 439 (529)
Q Consensus 377 ~~i~~~a~~l~~~L~~-~G~~v-~~~gt---------------~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg 439 (529)
++..+|+..+++.|++ +.+.- ..++- .+.++.+++. +.+.+.+.|+..++.....++-|
T Consensus 248 ~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~----~~~~~~~~~~~l~~~~~~~s~G~ 323 (366)
T PRK07582 248 ARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA----DAAAAERFVAASRLVVAATSFGG 323 (366)
T ss_pred HHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC----CHHHHHHHHHhCCcceecccCCC
Confidence 8889999999999988 34432 22221 1223444443 45667788888877653221111
Q ss_pred CCC----------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 440 DKS----------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 440 ~~~----------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
..+ ...++-||+++.. ||.+.+.+-|.+++.
T Consensus 324 ~~sl~~~~~~~~~~~~~~liR~svGl--------E~~~dli~dl~~al~ 364 (366)
T PRK07582 324 VHTSADRRARWGDAVPEGFVRLSCGI--------EDTDDLVADLERALD 364 (366)
T ss_pred ccchhhhHHHcCCCCCCCeEEEEecc--------CCHHHHHHHHHHHHh
Confidence 000 1224579998763 445555555555543
No 248
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.76 E-value=1.8e-16 Score=173.14 Aligned_cols=290 Identities=16% Similarity=0.142 Sum_probs=197.1
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (529)
Q Consensus 153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v 231 (529)
+++.+++.||++...+ +++|| .+|.++++++++|||+||+...+|-+.+ | .+.++|+ .++++.-
T Consensus 200 Ae~~aA~~fgAd~tyf-----vvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~-~-------aLilsga--~PVYl~P 264 (713)
T PRK15399 200 AEEYIARTFGAEQSYI-----VTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLA-H-------LLMMSDV--VPIWLKP 264 (713)
T ss_pred HHHHHHHHhCCCcEEE-----EeCChHHHHHHHHHHhcCCCCEEEeecccHHHHH-H-------HHHHcCC--eeEEecc
Confidence 5588899999998532 36786 8999999999999999999887665543 2 3445665 6666432
Q ss_pred CC-CC---CCCCH-----HHHHHHhhhc----CCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEE-EEeccccccccccc
Q 009673 232 DE-ST---GLVDY-----DMLEKTAILF----RPKLIIAGASAYPR-DFDYPRMRQIADAVGALL-MMDMAHISGLVAAS 296 (529)
Q Consensus 232 ~~-~~---~~iD~-----d~le~~i~~~----~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~l-ivD~ah~~Gli~~~ 296 (529)
.. .. +.|+. +.|++++.++ +|+.+++.+|+|-+ ..|++.|.++| |+.+ ++|+||+....+..
T Consensus 265 ~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p 341 (713)
T PRK15399 265 TRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHP 341 (713)
T ss_pred cccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCc
Confidence 21 11 34555 8899888753 45688888888776 67999999888 6766 69999986554333
Q ss_pred ccC--CCCC---cccEE---EecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh
Q 009673 297 VVA--DPFK---YCDVV---TTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA 367 (529)
Q Consensus 297 ~~~--~~~~---~aDiv---~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~ 367 (529)
..+ +++. ++|.+ +.|+||+|++... ++|..+... + .++++.+..-..+.+|++..+|++.+|...+
T Consensus 342 ~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~v----d-~~~~n~a~~m~~STSPsY~LmASLD~a~~~m 416 (713)
T PRK15399 342 IYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEY----D-EETFNEAFMMHTSTSPSYPIVASVETAAAML 416 (713)
T ss_pred ccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCC----C-HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Confidence 222 2332 46766 9999999998766 788775521 1 2345544333345789999999999887776
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHhc-C------cEEecC-------------C---------------CCCceEEEccC
Q 009673 368 QSPEFKVYQNKVVSNCRALASRLVEL-G------YKLVSG-------------G---------------SDNHLVLVDLR 412 (529)
Q Consensus 368 ~~~~~~~~~~~i~~~a~~l~~~L~~~-G------~~v~~~-------------g---------------t~~~~~~v~~~ 412 (529)
.....++..++.++.+..+++.|.+. + |.++.+ + .|.--+++..+
T Consensus 417 ~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~ 496 (713)
T PRK15399 417 RGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTP 496 (713)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEec
Confidence 54344677778888888888888763 3 344421 0 01111233332
Q ss_pred ---------CCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 413 ---------PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 413 ---------~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
..|+++..+.+.|+++||.+.+.. ...+=+ +.+.|.++++++++.+.|.+.-+
T Consensus 497 g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d---------~~~vL~----l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 497 GMDEQGNMSEEGIPAALVAKFLDERGIVVEKTG---------PYNLLF----LFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred CcccccccccCCCCHHHHHHHHHHcCCEEEecC---------CCeEEE----EeCCCCCHHHHHHHHHHHHHHHH
Confidence 347888899999999999997641 122222 44557789999999998887643
No 249
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=1.6e-16 Score=165.31 Aligned_cols=214 Identities=17% Similarity=0.057 Sum_probs=146.8
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccc
Q 009673 141 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 220 (529)
Q Consensus 141 ~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~ 220 (529)
.|++..+.+| ++++.+-+.+. .|.++||++|+.+++.++++|||+|+++++.|++...... ......
T Consensus 61 ~gnPt~~~Le----~~la~le~~~~-----~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~----~~l~~~ 127 (395)
T PRK05967 61 RGTPTTDALC----KAIDALEGSAG-----TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCD----TMLKRL 127 (395)
T ss_pred CCChHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHH----HHHHhc
Confidence 3667777777 56677766553 3667889999999999999999999999988876532100 012233
Q ss_pred cceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccccccc
Q 009673 221 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (529)
Q Consensus 221 g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~ 298 (529)
|. ++..++.+ +.+.+++++++ ++|+|++++|+||. ..|+++|+++|+++|+++++|+++...+ .
T Consensus 128 Gi--~v~~vd~~------~~e~l~~al~~-~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~-----~ 193 (395)
T PRK05967 128 GV--EVEYYDPE------IGAGIAKLMRP-NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPL-----Y 193 (395)
T ss_pred Ce--EEEEeCCC------CHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCce-----e
Confidence 44 44444321 35789999987 89999999988886 6799999999999999999999865432 2
Q ss_pred CCCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673 299 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (529)
Q Consensus 299 ~~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (529)
..|++ ++|+++.|.+|++.|.. +|+++.++ ++.+++..... ..|.. .....| +..++.+ .-+.-
T Consensus 194 ~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~------~~~~~l~~~~~--~~G~~-~~p~da-~l~~rgl--~Tl~l 261 (395)
T PRK05967 194 FRPLDFGVDISIHAATKYPSGHSDILLGTVSANE------KCWPQLLEAHG--TLGLC-AGPDDT-YQILRGL--RTMGI 261 (395)
T ss_pred cChhHcCCCEEEEecccccCCCCCeeEEEEEcCH------HHHHHHHHHHH--HcCCC-CCHHHH-HHHHcCc--ccHHH
Confidence 35666 79999999999987743 47776665 44444432111 12221 111111 1123322 23567
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 009673 375 YQNKVVSNCRALASRLVEL 393 (529)
Q Consensus 375 ~~~~i~~~a~~l~~~L~~~ 393 (529)
++++..+|+..+++.|++.
T Consensus 262 R~~~~~~na~~lA~~L~~h 280 (395)
T PRK05967 262 RLEHHRKSALEIARWLEGR 280 (395)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 7889999999999999883
No 250
>PLN02590 probable tyrosine decarboxylase
Probab=99.76 E-value=4.4e-16 Score=167.35 Aligned_cols=312 Identities=16% Similarity=0.101 Sum_probs=194.3
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCC----ceeeecCChHHHHHHHHHhhcC--------C--CCEEE-EcCCCCCccccc
Q 009673 144 EYIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAILK--------P--HDRIM-GLDLPHGGHLSH 208 (529)
Q Consensus 144 ~~~d~lE~~a~~~la~~~g~~~~~~----~~~V~~~sGs~A~~~~l~all~--------p--GD~Vl-~~~~~~~g~~s~ 208 (529)
+...++|+.+.+|+++++|.+...+ +.-+..++||+||+.++.+.-+ . .+-|+ +.+- .|++.
T Consensus 166 Pa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~---aH~Sv 242 (539)
T PLN02590 166 PAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQ---THSSF 242 (539)
T ss_pred chhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCC---chHHH
Confidence 4567899999999999999986421 1123446777999887765321 0 12233 3332 33332
Q ss_pred cccccccccccccceE-EEEEcccCC-CCCCCCHHHHHHHhhhc-----CCcEEEEc--CCCCCCCCCHHHHHHHHHHhC
Q 009673 209 GFMTPKRRVSGTSIYF-ESMPYRLDE-STGLVDYDMLEKTAILF-----RPKLIIAG--ASAYPRDFDYPRMRQIADAVG 279 (529)
Q Consensus 209 g~~~~~~~i~~~g~~~-~~v~~~v~~-~~~~iD~d~le~~i~~~-----~pklIi~~--~s~~p~~~d~~~i~~ia~~~g 279 (529)
.|.+.+.|.+. .++.+++|. +++.+|+++|+++|.+. .|-+|+.+ .++.+...|+++|++||++||
T Consensus 243 -----~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g 317 (539)
T PLN02590 243 -----RKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYG 317 (539)
T ss_pred -----HHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhC
Confidence 24556666532 244555664 35799999999999653 25566654 344455889999999999999
Q ss_pred CEEEEecccccccccccccC---CCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHh-------hhccc-----
Q 009673 280 ALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES-------AINNA----- 343 (529)
Q Consensus 280 ~~livD~ah~~Gli~~~~~~---~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~-------~i~~~----- 343 (529)
+|++||+|+.........+. ..++.+|.++.++|||+..|.+ |+++++++. .+.+ .+...
T Consensus 318 ~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~----~l~~a~~~~~~YL~~~~~~~~ 393 (539)
T PLN02590 318 IWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRY----SLIDALKTNPEYLEFKVSKKD 393 (539)
T ss_pred CeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHH----HHHHHhhcCHHHhCCcccccc
Confidence 99999998543332222211 2234789999999999988877 999988741 1111 11110
Q ss_pred -c--c--CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEEEccCCCCCc
Q 009673 344 -V--F--PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRPMGID 417 (529)
Q Consensus 344 -~--~--p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~~~~~i~ 417 (529)
. + ...+.+... ....++.+|+....++|.+++++..+.++++.+.|++ .+|+++.+.. -.++.+.+.+.+.+
T Consensus 394 ~~~d~~d~~i~lsRr~-raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~-l~iVcFr~~~~~~~ 471 (539)
T PLN02590 394 TVVNYKDWQISLSRRF-RSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRY-FSLVCFRLAPVDGD 471 (539)
T ss_pred cCCCccccCCCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc-eEEEEEEecCCCCC
Confidence 0 0 012233232 3455667788777788999999999999999999987 5899987532 22333333332222
Q ss_pred H-------HHHHHhHhcCCe-EEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 418 G-------ARVEKILDMASI-TLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 418 ~-------~~~~~~L~~~GI-~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
. ..+.+.|.+.|. .+....+. +...||+++... -.+++|++.+.+.|.+...
T Consensus 472 ~~~~~~ln~~l~~~l~~~G~~~vs~t~~~------g~~~lR~~i~n~---~T~~~dv~~~~~~i~~~a~ 531 (539)
T PLN02590 472 EDQCNERNRELLAAVNSTGKIFISHTALS------GKFVLRFAVGAP---LTEEKHVTEAWQIIQKHAS 531 (539)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeeEEC------CEEEEEEEecCC---CCCHHHHHHHHHHHHHHHH
Confidence 1 234555555554 44332222 234799876322 2458999999999987644
No 251
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.76 E-value=1.2e-16 Score=165.99 Aligned_cols=211 Identities=17% Similarity=0.122 Sum_probs=145.0
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
|++.++++| ++++++.|.+. .|.+.||+.|+.+++.++++|||+|+++...|++.+... ...+...|
T Consensus 62 ~~P~~~~lE----~~la~leg~~~-----av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~----~~~~~~~G 128 (384)
T PRK06434 62 GNPTVQAFE----EKYAVLENAEH-----ALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFF----NKVLKTLG 128 (384)
T ss_pred CChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHH----HHHHHhcC
Confidence 678889999 66888999875 366799999999999999999999999877666654211 11222334
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. +++.+++++. ..++ +...++|+|++..++||+ ..|+++|+++|+++| +++|+++..+. ..
T Consensus 129 i--~v~fvd~~~~-~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~-----~~ 191 (384)
T PRK06434 129 I--HVDYIDTDRL-NSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPY-----NQ 191 (384)
T ss_pred c--EEEEECCCCh-hhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcc-----cC
Confidence 3 6667666531 1122 222368999999888876 789999999999998 56799975432 23
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
.|++ ++|++++|.||++.|+. ||+|+++++ ++.+++..... ..|......-|+ ..+..+ ..+..+
T Consensus 192 ~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~-----~~~~~~~~~~~--~~G~~~~~~~A~--l~~~gL--~tL~~R 260 (384)
T PRK06434 192 NPLDLGADVVIHSATKYISGHSDVVMGVAGTNNK-----SIFNNLVERRK--TLGSNPDPIQAY--LALRGL--KTLGLR 260 (384)
T ss_pred CchhcCCCEEEeecccccCCCCCceEEEEecCcH-----HHHHHHHHHHH--hcCCCCCHHHHH--HHHhCC--CcHHHH
Confidence 4555 79999999999998865 688888664 56555543210 112211112222 223333 346788
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 009673 376 QNKVVSNCRALASRLVEL 393 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~~ 393 (529)
+++..+|+..+.+.|.+.
T Consensus 261 ~~r~~~~a~~~a~~L~~~ 278 (384)
T PRK06434 261 MEKHNKNGMELARFLRDS 278 (384)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 899999999999999883
No 252
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=1.5e-16 Score=168.01 Aligned_cols=153 Identities=20% Similarity=0.179 Sum_probs=116.6
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+.+| +.+++++|.+. .+.+.||+.|+.+++.++++|||+|++....|++.+... ...+...|
T Consensus 67 ~~p~~~~Le----~~lA~l~g~~~-----av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~----~~~l~~~G 133 (436)
T PRK07812 67 MNPTQDVVE----QRIAALEGGVA-----ALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLF----HYTLPKLG 133 (436)
T ss_pred CCchHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHH----HHHhhcCe
Confidence 455677777 67889999876 256689999999999999999999999987776543110 00111123
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
++++.++ + ..|++++++++++ ++++|++..++||. ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 134 --i~v~~vd-d----~~d~e~l~~ai~~-~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~-----~ 200 (436)
T PRK07812 134 --IEVSFVE-D----PDDLDAWRAAVRP-NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL-----I 200 (436)
T ss_pred --EEEEEEC-C----CCCHHHHHHhCCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 3555543 2 2389999999987 89999998888776 78999999999999999999999876644 2
Q ss_pred CCCC-cccEEEecccccccCCC
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR 320 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr 320 (529)
.++. ++|+++.|+||+++|+.
T Consensus 201 ~pl~~GaDivv~S~tK~lgg~G 222 (436)
T PRK07812 201 RPLEHGADIVVHSATKYLGGHG 222 (436)
T ss_pred CchhcCCCEEEEecccccCCCC
Confidence 3444 79999999999997664
No 253
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.75 E-value=6.4e-17 Score=176.70 Aligned_cols=292 Identities=16% Similarity=0.129 Sum_probs=199.9
Q ss_pred HHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcc
Q 009673 152 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (529)
Q Consensus 152 ~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~ 230 (529)
.+++.+++.||++...+ +++|| .+|.++++++++|||+||+...+|-+.+ | .+.++|+ .++++.
T Consensus 199 eAe~~AA~~fgAd~tyf-----vvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~-h-------aLilsga--~PVYl~ 263 (714)
T PRK15400 199 EAEEYIARVFNADRSYM-----VTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLT-H-------LMMMSDV--TPIYFR 263 (714)
T ss_pred HHHHHHHHHhCCCcEEE-----EeCchHHHHHHHHHHhcCCCCEEEeecccHHHHH-H-------HHHHcCC--eEEEec
Confidence 35588899999998632 36786 8999999999999999999887665432 2 3445665 666654
Q ss_pred cCC-CC---CCCC-----HHHHHHHhhhc----CCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEeccccccccccc
Q 009673 231 LDE-ST---GLVD-----YDMLEKTAILF----RPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAAS 296 (529)
Q Consensus 231 v~~-~~---~~iD-----~d~le~~i~~~----~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~ 296 (529)
... +. +.|+ .+.|++.+.++ +|+.+++.+|+|-+ ..|++.|.++|+.++ +++|+||+....+.+
T Consensus 264 P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p 341 (714)
T PRK15400 264 PTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSP 341 (714)
T ss_pred ccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCc
Confidence 321 11 2345 89999998763 34478888888766 789999999998887 789999987654444
Q ss_pred ccC--CCCC-cc---c--EEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh
Q 009673 297 VVA--DPFK-YC---D--VVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA 367 (529)
Q Consensus 297 ~~~--~~~~-~a---D--iv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~ 367 (529)
..+ +++. ++ | +++.|+||+|++... ++|..+... + .++++.+..-..+.+|++..+|++.+|...+
T Consensus 342 ~~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~v----d-~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m 416 (714)
T PRK15400 342 IYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDV----N-EETFNEAYMMHTTTSPHYGIVASTETAAAMM 416 (714)
T ss_pred ccCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCC----C-HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Confidence 332 3342 45 5 999999999988766 677665421 1 2345444333345789999999999887776
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHh-cC------cEEecCC----------------------------CCCceEEEccC
Q 009673 368 QSPEFKVYQNKVVSNCRALASRLVE-LG------YKLVSGG----------------------------SDNHLVLVDLR 412 (529)
Q Consensus 368 ~~~~~~~~~~~i~~~a~~l~~~L~~-~G------~~v~~~g----------------------------t~~~~~~v~~~ 412 (529)
.....++..++.++.+..+++.|.+ .+ |.++.+. .|.--+++.++
T Consensus 417 ~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tp 496 (714)
T PRK15400 417 KGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTP 496 (714)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeC
Confidence 5434567778888888888888877 34 5554211 01111233332
Q ss_pred C---------CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 413 P---------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 413 ~---------~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
. .|+++..+.+.|+++||.+.+.. ...+=+ +.+.|.++++++++.+.|.+.-+
T Consensus 497 gi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d---------~~~iLf----l~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 497 GMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTG---------PYNLLF----LFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred CCCCCccccccCCCHHHHHHHHHHcCCEEEecC---------CCeEEE----EeCCCCCHHHHHHHHHHHHHHHH
Confidence 2 46778889999999999997641 122222 34457789999999998887633
No 254
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.75 E-value=8.4e-16 Score=161.28 Aligned_cols=312 Identities=15% Similarity=0.124 Sum_probs=183.2
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh----c
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----L 189 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al----l 189 (529)
-.|+|.+|+...+...+..+ .. + .++...+++ ++++++++.+. .+...||++|+..++.++ .
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~---~~-~-~~~~~~~la----~~l~~~~~~~~-----v~~~~sGseA~~~al~~ar~~~~ 113 (389)
T PRK01278 48 AHPHLVEALKEQAEKLWHVS---NL-Y-RIPEQERLA----ERLVENSFADK-----VFFTNSGAEAVECAIKTARRYHY 113 (389)
T ss_pred CCHHHHHHHHHHHHhcCccc---cc-c-CChHHHHHH----HHHHhhCCCCE-----EEEcCCcHHHHHHHHHHHHHHHH
Confidence 47888988887775322111 11 1 123233333 66777765432 245688999999988766 5
Q ss_pred CCCC----EEEEcCCCCCccccccccccccccccccceEEEEEc-ccCCCCC----CCCHHHHHHHhhhcCCcEEEEcCC
Q 009673 190 KPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDESTG----LVDYDMLEKTAILFRPKLIIAGAS 260 (529)
Q Consensus 190 ~pGD----~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~-~v~~~~~----~iD~d~le~~i~~~~pklIi~~~s 260 (529)
++|| +|++.++.|.|..... ....+.......+ +.. .++ ..|++++++.+++ ++++|+++..
T Consensus 114 ~~G~~~r~~vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~l~~-~~~avivep~ 184 (389)
T PRK01278 114 GKGHPERYRIITFEGAFHGRTLAT-------IAAGGQEKYLEGFGPLV-PGFDQVPFGDIEALKAAITP-NTAAILIEPI 184 (389)
T ss_pred hcCCCCCCEEEEECCCcCCCcHHH-------HhccCChhhcccCCCCC-CCceEeCCCCHHHHHHhhCC-CeEEEEEecc
Confidence 6787 8999987664432111 1111110000000 111 111 2689999999977 8999999865
Q ss_pred CCCC------CCCHHHHHHHHHHhCCEEEEeccccccccccccc-CC-CCC-cccEEEecccccc-cCCCCeEEEeeCCC
Q 009673 261 AYPR------DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDP 330 (529)
Q Consensus 261 ~~p~------~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~-~~~-~aDiv~~S~hK~l-~GprgG~i~~~~~~ 330 (529)
++++ ..++++|+++|++||+++|+|++|. |+...+.. .. ... ..|++ +++|.+ +|+|.|++++++
T Consensus 185 ~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~-- 259 (389)
T PRK01278 185 QGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-GMGRTGKLFAHEWAGVTPDIM--AVAKGIGGGFPLGACLATE-- 259 (389)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCcceeecccCCCCCEE--EEehhccCCcceEEEEEcH--
Confidence 5443 2368999999999999999999964 54332211 10 011 24654 567998 568899999987
Q ss_pred cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcE-Eec--CCCCCc
Q 009673 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYK-LVS--GGSDNH 405 (529)
Q Consensus 331 ~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~-v~~--~gt~~~ 405 (529)
++.+.+.........+++.. ..++..++++.+... ++.+++.++.+.+.+.|++. ... ++. .+ ...
T Consensus 260 ----~~~~~~~~~~~~~t~~~~~~-~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g-~G~ 330 (389)
T PRK01278 260 ----EAAKGMTPGTHGSTYGGNPL-AMAVGNAVLDVILAP---GFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRG-KGL 330 (389)
T ss_pred ----HHHhccCCCCCCCCCCccHH-HHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHhhCCCceeeEec-ccE
Confidence 66666654333333344333 333333467665432 33455556666666666542 111 221 11 123
Q ss_pred eEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 406 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 406 ~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
++++.+.. +..++.+.|.+.||.+ .|+ ..+.|||+.+.. +++++++++++.|.+++.
T Consensus 331 ~~~i~~~~---~~~~~~~~l~~~GV~~----~p~-----~~~~lR~~p~~~----~~~~~i~~~l~~l~~~l~ 387 (389)
T PRK01278 331 LLGLKCVV---PNRDLVQALRDEGLLT----VGA-----GDNVVRLLPPLI----ITEEEIDEALERLERAAE 387 (389)
T ss_pred EEEEEEec---CHHHHHHHHHHCCeEE----eec-----CCCEEEEeCCcc----cCHHHHHHHHHHHHHHHH
Confidence 33444421 4566767776779998 443 246899986532 458999999999988764
No 255
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=3.6e-16 Score=165.33 Aligned_cols=152 Identities=20% Similarity=0.216 Sum_probs=118.8
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++.++++| +.++++.|.++ .|.+.||++|+.+++.+++++||+|++++.+|++...... ..+...|
T Consensus 62 ~~p~~~~le----~~lA~l~g~~~-----av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~----~~l~~~G 128 (433)
T PRK08134 62 SNPTVAVLE----ERVAALEGGVG-----AIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLH----YTLRRFG 128 (433)
T ss_pred cChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHH----HHHhhCC
Confidence 456677777 67889999876 2557999999999999999999999999988865422100 0111234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
.+++.++++ |++++++.+++ +||+|++..++||+ ..|+++|+++|+++|+++++|++|..+.. .
T Consensus 129 --i~v~~vd~~------d~~~l~~~i~~-~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~-----~ 194 (433)
T PRK08134 129 --IETTFVKPG------DIDGWRAAIRP-NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYL-----L 194 (433)
T ss_pred --eEEEEECCC------CHHHHHHhcCC-CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 366665542 79999999988 89999998888885 78999999999999999999999887754 2
Q ss_pred CCCC-cccEEEecccccccCCC
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR 320 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr 320 (529)
.|+. ++|++++|.||++.|+.
T Consensus 195 ~pl~~GaD~vv~S~tK~l~g~g 216 (433)
T PRK08134 195 RPFEHGADLVYHSATKFLGGHG 216 (433)
T ss_pred CchhcCCCEEEeccccccCCCC
Confidence 3444 79999999999997665
No 256
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=2.5e-16 Score=166.30 Aligned_cols=160 Identities=21% Similarity=0.194 Sum_probs=118.9
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+++| +.++++.|.+. .+.+.||++|+.+++.++++|||+|++.++.|++.+... ...+...|
T Consensus 56 ~~pt~~~Le----~~lA~l~g~~~-----~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~----~~~l~~~g 122 (425)
T PRK06084 56 MNPTNDVLE----QRVAALEGGVG-----ALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLL----AHTLPRIG 122 (425)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----eeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHH----HHhcccce
Confidence 345566777 67888998764 345689999999999999999999999988776543210 00111123
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
.++..++ ..|++++++.+++ ++++|++++++||+ ..|+++|.++|+++|++||+|++|..+.. .
T Consensus 123 --i~v~~~d------~~d~e~le~ai~~-~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~-----~ 188 (425)
T PRK06084 123 --IETRFAA------HDDIAALEALIDE-RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVL-----C 188 (425)
T ss_pred --eEEEEEC------CCCHHHHHHHhcc-CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 2433432 2489999999987 89999999888886 77999999999999999999999876543 2
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeC
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~ 328 (529)
.|++ ++|++++|+||++.|+. ||+++.+.
T Consensus 189 ~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~ 221 (425)
T PRK06084 189 RPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSG 221 (425)
T ss_pred ChhhcCCCEEEECchhcccccccceeEEEEeCC
Confidence 3444 69999999999997654 46666543
No 257
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=1.5e-16 Score=168.17 Aligned_cols=160 Identities=21% Similarity=0.173 Sum_probs=120.4
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+.+| +.++++.|.+. .+.++||+.|+..++.++++|||+|+++++.|++.+... ...+...|
T Consensus 62 ~~p~~~~Le----~~lA~leg~~~-----al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~----~~~~~~~G 128 (431)
T PRK08248 62 MNPTTDVFE----KRIAALEGGIG-----ALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLF----AHTLPKLG 128 (431)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHH----HHHHHhCC
Confidence 455667777 67888999764 356789999999999999999999999998876543211 01122234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
.+++.++. .|++++++++++ ++++|++.+++||+ ..|+++|.++|+++|+++|+|+++..+.. .
T Consensus 129 --v~v~~vd~------~d~e~l~~ai~~-~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~-----~ 194 (431)
T PRK08248 129 --ITVKFVDP------SDPENFEAAITD-KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYL-----L 194 (431)
T ss_pred --EEEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCcccc-----C
Confidence 36666543 489999999987 89999999888886 78999999999999999999998764422 2
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeC
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~ 328 (529)
.|++ ++|+++.|+||+++|+. ||+++.+.
T Consensus 195 ~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~ 227 (431)
T PRK08248 195 RPIEHGADIVVHSATKFIGGHGTSIGGVIVDSG 227 (431)
T ss_pred ChhHcCCCEEEEcCccccCCCCCceEEEEEeCC
Confidence 3344 79999999999997764 25555443
No 258
>PLN02263 serine decarboxylase
Probab=99.74 E-value=1.5e-15 Score=159.43 Aligned_cols=289 Identities=14% Similarity=0.084 Sum_probs=190.4
Q ss_pred HHHHHHHHHHHHHHHcCCCC-CCCceeeecCChHHHHHHHHHhhcC--CCCEEEEcCCCCCccccccccccccccccccc
Q 009673 146 IDELETLCQKRALAAFNLDE-NKWGVNVQPLSGSPANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 146 ~d~lE~~a~~~la~~~g~~~-~~~~~~V~~~sGs~A~~~~l~all~--pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
..++|..+.+|+++++|.+. +.|+ +..++||++|+.++.+.-+ +...|++++-.| ++. .|.+.+.|.
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G--~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH---~Sv-----~KAa~llgi 200 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWG--YITNCGTEGNLHGILVGREVFPDGILYASRESH---YSV-----FKAARMYRM 200 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeE--EEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCcc---HHH-----HHHHHhcCC
Confidence 56899999999999999986 3465 3346677999988877632 334555555433 322 245667776
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcC--CcEEEEc--CCCCCCCCCHHHHHHHHHHhCC-----EEEEecccccccc
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFR--PKLIIAG--ASAYPRDFDYPRMRQIADAVGA-----LLMMDMAHISGLV 293 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~--pklIi~~--~s~~p~~~d~~~i~~ia~~~g~-----~livD~ah~~Gli 293 (529)
+.+.++++ +++.+|+++|++.|.+.+ |-+|+.+ ....+...|+++|.++|+++|+ |+++|+|. .|.+
T Consensus 201 --~~~~Vp~d-~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~-GG~~ 276 (470)
T PLN02263 201 --ECVKVDTL-VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGAL-FGLM 276 (470)
T ss_pred --cceEeccC-CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccc-hhhH
Confidence 45556666 578999999999997643 5555554 3344448899999999999997 99999984 4543
Q ss_pred c-ccccCCCCC---cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcc------cccCCCCCCChHHHHHHHHH
Q 009673 294 A-ASVVADPFK---YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN------AVFPGLQGGPHNHTIGGLAV 362 (529)
Q Consensus 294 ~-~~~~~~~~~---~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~------~~~p~~~g~p~~~~iaala~ 362 (529)
. .-....++. .+|.++.++|||+..|-+ |++++++. ..+.+.. ...+.+.|+.+....+.++.
T Consensus 277 lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~------~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~ 350 (470)
T PLN02263 277 MPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRME------HINVLSSNVEYLASRDATIMGSRNGHAPIFLWY 350 (470)
T ss_pred hhhcccccccCCCcCccEEEECCccccCCCcCEEEEEEehh------hHhhhccChHhhCCCCCCcCCCCCcHHHHHHHH
Confidence 2 111111233 489999999999988888 99999873 2222111 11234556655555667777
Q ss_pred HHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCC
Q 009673 363 CLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKS 442 (529)
Q Consensus 363 al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~ 442 (529)
.|+.....+|.++.++..++++++.+.|++.|+.++... ... ++.++.. + +.. ...|..++.
T Consensus 351 ~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p-~s~--~V~f~~p--~-~~~----~~~gW~L~~-------- 412 (470)
T PLN02263 351 TLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAMLNE-LSS--TVVFERP--K-DEE----FVRRWQLAC-------- 412 (470)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCC-Cce--EEEEecC--c-hHH----hhcceEEcc--------
Confidence 888877788999999999999999999999898877532 222 2323321 1 111 134665542
Q ss_pred CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 443 ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 443 ~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.+..+||.+.. ..+.+.++++.+-|.+...
T Consensus 413 --~~~~~Hivvmp----hv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 413 --QGNIAHVVVMP----SVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred --CCCcEEEEEcC----CCCHHHHHHHHHHHHHHHh
Confidence 12357876532 1345777777776665544
No 259
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=2.8e-16 Score=166.24 Aligned_cols=156 Identities=22% Similarity=0.228 Sum_probs=119.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccce
Q 009673 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 223 (529)
Q Consensus 144 ~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~ 223 (529)
+....+| +.++++.|.+. .+.+.||++|+.+++.++++|||+|++..+.|++...... ..+...|.
T Consensus 63 p~~~~le----~~lA~l~g~~~-----al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~----~~~~~~G~- 128 (427)
T PRK05994 63 PTNAVLE----ERVAALEGGTA-----ALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFG----HAFKSFGW- 128 (427)
T ss_pred ccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHH----HHHHhcCc-
Confidence 4456666 67888999875 3556999999999999999999999999988876532100 01122343
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCC
Q 009673 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP 301 (529)
Q Consensus 224 ~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~ 301 (529)
+++.++. .|++++++.+++ ++++|++.+++||+ ..|+++|.++|+++|+++++|++|..+.. ..|
T Consensus 129 -~v~~vd~------~d~~~l~~ai~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~-----~~p 195 (427)
T PRK05994 129 -QVRWADA------DDPASFERAITP-RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYL-----IRP 195 (427)
T ss_pred -EEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcccccc-----CCc
Confidence 5555442 378999999987 89999999888886 78999999999999999999999876543 234
Q ss_pred CC-cccEEEecccccccCCCC---eEEEe
Q 009673 302 FK-YCDVVTTTTHKSLRGPRG---GMIFF 326 (529)
Q Consensus 302 ~~-~aDiv~~S~hK~l~Gprg---G~i~~ 326 (529)
++ ++|+++.|+||++.|+.+ |+++.
T Consensus 196 l~~gaDivv~S~tK~lgg~~~~~gG~v~~ 224 (427)
T PRK05994 196 IEHGADIVVHSLTKFLGGHGNSMGGIIVD 224 (427)
T ss_pred cccCCcEEEEcCccccCCCCCcEEEEEEe
Confidence 54 799999999999977653 55553
No 260
>PRK07049 methionine gamma-lyase; Validated
Probab=99.74 E-value=2.8e-16 Score=166.23 Aligned_cols=217 Identities=18% Similarity=0.143 Sum_probs=146.5
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
++....+| +.++++.|.+. .+.++||+.|+.+++.++++|||+|++.+|.|+++..... ......|.
T Consensus 82 ~Pt~~~Le----~~lA~leg~~~-----~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~----~~l~~~Gi 148 (427)
T PRK07049 82 HPNSEIVE----DRLAVYEGAES-----AALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLA----KTFRNFGV 148 (427)
T ss_pred CcCHHHHH----HHHHHHhCCCc-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHH----HHHHhcCc
Confidence 34456666 67888888764 3556889999999999999999999999998876532100 00112343
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhh----cCCcEEEEcCCCCCC--CCCHHHHHHHHHH------hCCEEEEeccccc
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAIL----FRPKLIIAGASAYPR--DFDYPRMRQIADA------VGALLMMDMAHIS 290 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~----~~pklIi~~~s~~p~--~~d~~~i~~ia~~------~g~~livD~ah~~ 290 (529)
+++.++ + ..|++++++.+.+ .++|+|++++|+||+ ..|+++|.++++. +++++++|++...
T Consensus 149 --~~v~~~-~----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~ 221 (427)
T PRK07049 149 --GAVGFA-D----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLG 221 (427)
T ss_pred --EEEEEe-C----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccc
Confidence 444543 1 2567788766642 378999999999998 7899999999988 8999999998432
Q ss_pred ccccccccCCCCC-cccEEEecccccccC---CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHH
Q 009673 291 GLVAASVVADPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (529)
Q Consensus 291 Gli~~~~~~~~~~-~aDiv~~S~hK~l~G---prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~ 366 (529)
. . ...|+. ++|+++.|++|++.| .|+|+++.++ ++.+++.....+. .++........ +++.
T Consensus 222 ~-~----~~~pl~~g~divv~S~SK~~gG~~glr~G~vv~~~------~l~~~l~~~~~~~-g~~ls~~~a~l---~~r~ 286 (427)
T PRK07049 222 P-V----FQKPLEHGADLSVYSLTKYVGGHSDLVAGAVLGRK------ALIRQVRALRSAI-GTQLDPHSCWM---LGRS 286 (427)
T ss_pred c-c----cCCccccCCCEEEEcCceeecCCCCcEEEEEECCH------HHHHHHHHHHHhc-CCCCCHHHHHH---HHcC
Confidence 2 2 123444 689999999999864 5789999876 6766665432221 11111111111 2222
Q ss_pred hcCchHHHHHHHHHHHHHHHHHHHHhc-CcE
Q 009673 367 AQSPEFKVYQNKVVSNCRALASRLVEL-GYK 396 (529)
Q Consensus 367 ~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~ 396 (529)
+ ..+..++++..+|++.+.+.|++. ++.
T Consensus 287 L--~tl~~R~~~~~~~a~~la~~L~~~p~V~ 315 (427)
T PRK07049 287 L--ETLVLRMERANRNARAVAEFLRDHPKVE 315 (427)
T ss_pred C--ChHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 2 235667788899999999999883 543
No 261
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.74 E-value=1.6e-16 Score=151.94 Aligned_cols=309 Identities=19% Similarity=0.227 Sum_probs=205.9
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc-CCC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-KPH 192 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all-~pG 192 (529)
++.+.+++|..... |...|+-.+...+|| ++.+++||-+.. +.++||+.+|+++++.-+ +||
T Consensus 34 PTdeMr~am~eA~v--------gDdVyGeD~tt~rLE----~~vA~l~GKEAg-----LFv~SGTmgNllaIm~Hc~~rg 96 (384)
T KOG1368|consen 34 PTDEMRRAMAEASV--------GDDVYGEDPTTNRLE----QRVAELFGKEAG-----LFVPSGTMGNLLAIMVHCHQRG 96 (384)
T ss_pred ChHHHHHHHhhccc--------CcccccCCccHHHHH----HHHHHHhCccce-----eeecccccccHHHHHHHhcCCC
Confidence 45677888765432 233455555567788 678899999874 445999999998888754 599
Q ss_pred CEEEEcCCCCCcccccccccccccc-ccccceEEEEEcccCCCCCCCCHHHHHHHhhhcC-------CcEEEEcCCCC--
Q 009673 193 DRIMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-------PKLIIAGASAY-- 262 (529)
Q Consensus 193 D~Vl~~~~~~~g~~s~g~~~~~~~i-~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~-------pklIi~~~s~~-- 262 (529)
.+|++-+..|- |-|. ...+ .+.|. .+.++.. ++++.+|+++||..+...+ +++|++....+
T Consensus 97 ~eii~gd~~HI----~~~E--~gg~s~l~gv--~~~tv~~-e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~ 167 (384)
T KOG1368|consen 97 SEIIVGDRAHI----HRYE--QGGISQLAGV--HVRTVKN-ENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNC 167 (384)
T ss_pred ceEEeccchhe----eehh--ccChhhhccc--eeEeeee-CCCCeeeHHHHHHhhcCCCCCccCCCceEEEeecccccc
Confidence 99998876542 1111 1122 23343 4444433 2568999999999997432 58898875543
Q ss_pred CC-CCC---HHHHHHHHHHhCCEEEEecccccccc-cccccCCCC----CcccEEEecccccccCCCCeEEEeeCCCcch
Q 009673 263 PR-DFD---YPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF----KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLG 333 (529)
Q Consensus 263 p~-~~d---~~~i~~ia~~~g~~livD~ah~~Gli-~~~~~~~~~----~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~ 333 (529)
++ ..| ++++.++|++||+.|++|+|...... +.++ |+ ..+|-|...++|.|..|-|.+|++++
T Consensus 168 Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV---~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k----- 239 (384)
T KOG1368|consen 168 GGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGV---PVKKICSAFDSVSICLSKGLGAPVGSVIVGSK----- 239 (384)
T ss_pred CceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCC---CHHHHHHhhhhhhhhhhccCCCCcccEEEccH-----
Confidence 43 445 45677889999999999988654322 1121 22 25788999999999999999999999
Q ss_pred hHHHhhh---cccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC-cEEecCCCCCceEEE
Q 009673 334 VELESAI---NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG-YKLVSGGSDNHLVLV 409 (529)
Q Consensus 334 ~~l~~~i---~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G-~~v~~~gt~~~~~~v 409 (529)
+++++. ++.. .||.-...+.|.+ +|--+ ...++ ..++..++++.|++.++..+ +++-.+..+++++.+
T Consensus 240 -~FI~kA~~~RKal----GGGmRQsGvLaaa-aLval-~~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~ 311 (384)
T KOG1368|consen 240 -DFIDKARHFRKAL----GGGMRQSGVLAAA-ALVAL-DENVP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNM 311 (384)
T ss_pred -HHHHHHHHHHHHh----cCchhHHHHHHHH-HHHHh-hcchH-HHHHHHHHHHHHHHHhccccceeeecchhhcceeee
Confidence 677654 3332 2222222222211 22211 23344 45667788899999998865 777666556777766
Q ss_pred ccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 410 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 410 ~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
.+...+++.+++.+.|++.||.+ ++|+ ...+||.+++ ..+.++++.+...+.+.+
T Consensus 312 ~l~q~~~~~~~l~~~~~k~gi~l----m~~~-----s~r~Rivlh~----Qvt~~~ve~~~~~~~k~~ 366 (384)
T KOG1368|consen 312 VLCQARLTAEELCKFLEKNGILL----MGGA-----SRRIRIVLHH----QVTDEDVEYVKSVLSKKF 366 (384)
T ss_pred ecccccCCHHHHHHHHHHCCeEE----eecc-----ccceEEEEEE----ecCHHHHHHHHHHHHHHH
Confidence 66666788999999999999998 4443 3569998764 356899999888885433
No 262
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.74 E-value=1.1e-15 Score=160.92 Aligned_cols=307 Identities=13% Similarity=0.114 Sum_probs=184.7
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
.-.|.|.+|+...+. ++.... +.+ .++...+++ ++++++++.+. .+..+||++|+..++....
T Consensus 56 h~~p~v~~ai~~~~~-~~~~~~---~~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGseA~e~Alk~a~~~~ 121 (396)
T PRK04073 56 HRHPKIIQALKDQAD-KVTLTS---RAF-HSDQLGPWY----EKVAKLTGKDM-----VLPMNTGAEAVETAIKAARRWA 121 (396)
T ss_pred CCCHHHHHHHHHHHh-hccccc---ccc-CCHHHHHHH----HHHHhcCCCCe-----EEEcCChHHHHHHHHHHHHHHh
Confidence 347888888887764 332211 111 122222333 66777776542 3556899999998887652
Q ss_pred ------CCC-CEEEEcCCCC-Cccccccccccccccccccce-----EE-----EEEcccCCCCCCCCHHHHHHHhhhcC
Q 009673 190 ------KPH-DRIMGLDLPH-GGHLSHGFMTPKRRVSGTSIY-----FE-----SMPYRLDESTGLVDYDMLEKTAILFR 251 (529)
Q Consensus 190 ------~pG-D~Vl~~~~~~-~g~~s~g~~~~~~~i~~~g~~-----~~-----~v~~~v~~~~~~iD~d~le~~i~~~~ 251 (529)
++| ++|+..+-.+ |.+.. .++..+.. +. +..++ ..|++++++.+.+ +
T Consensus 122 ~~~~g~~~~r~~ii~~~~~~HG~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~i~~-~ 186 (396)
T PRK04073 122 YDVKGVEPNKAEIIACEGNFHGRTMA--------AVSLSSEEEYKRGFGPMLPGIKKIP------YGDLEALKAAITP-N 186 (396)
T ss_pred hhccCCCCCCCEEEEECCCcCCCCHH--------HHhhcCCcccccCCCCCCCCceEeC------CCCHHHHHHhccc-C
Confidence 144 6788776543 32211 11111100 00 11111 2278999998876 7
Q ss_pred CcEEEEcCCCCCC--CCC----HHHHHHHHHHhCCEEEEecccccccccccc-cC-CCCC-cccEEEecccccccC--CC
Q 009673 252 PKLIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDVVTTTTHKSLRG--PR 320 (529)
Q Consensus 252 pklIi~~~s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~-~~~~-~aDiv~~S~hK~l~G--pr 320 (529)
+++|+++.+.+++ ..+ +++|.++|++||+++|+|++|. |+...+. .. .... ..|+++ ++|.+++ +|
T Consensus 187 ~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~~~pdi~~--~sK~lg~gg~~ 263 (396)
T PRK04073 187 TAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-GLGRTGKLFACDWDNVTPDMYI--LGKALGGGVFP 263 (396)
T ss_pred eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcCcHHHHhhhcCCCCCEEE--ecccccCCCCc
Confidence 8999998776654 333 8999999999999999999965 4432221 11 0111 357776 4699843 68
Q ss_pred CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC
Q 009673 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG 400 (529)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~ 400 (529)
.|++++++ ++.+.+.........+++.....+++ ++|+.+...+ +.++..++.++|.+.|++.+...+..
T Consensus 264 ig~~~~~~------~i~~~~~~~~~~~t~~~~~~~~aaa~-aaL~~~~~~~---l~~~~~~~~~~l~~~L~~l~~~~i~~ 333 (396)
T PRK04073 264 ISCVAANR------DILGVFTPGSHGSTFGGNPLACAVSI-AALEVLEEEK---LPERSLELGEYFKEQLKEIDNPMIKE 333 (396)
T ss_pred ceEEEEcH------HHHhhhcCCCCCCCCCCCHHHHHHHH-HHHHHHHhcC---HHHHHHHHHHHHHHHHHhhcCCcccc
Confidence 89999987 67776654332333444444444443 4676554333 34666677888889888754322221
Q ss_pred -CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 401 -GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 401 -gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
.....++.+++.. +...+.+.|.++||.+... .++.|||+.+.. .+++|++++++.|++++
T Consensus 334 ~~~~g~~~~~~~~~---~~~~~~~~l~~~Gv~~~~~---------~~~~iRi~p~l~----~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 334 VRGRGLFIGVELNE---PARPYCEALKEEGLLCKET---------HETVIRFAPPLV----ITKEELDWAFEKIKAVL 395 (396)
T ss_pred eecceEEEEEEecc---hHHHHHHHHHHCCeEEecC---------CCCEEEEECCcc----cCHHHHHHHHHHHHHHh
Confidence 0123445555532 3566777788899998421 246899987644 45899999999998765
No 263
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.74 E-value=4.7e-16 Score=164.38 Aligned_cols=160 Identities=21% Similarity=0.176 Sum_probs=120.4
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+++| +.+++++|.+. .+.++||+.|+..++.++++|||+|++.++.|++.+... ...+...|
T Consensus 55 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~----~~~~~~~G 121 (418)
T TIGR01326 55 MNPTTDVLE----QRIAALEGGVA-----ALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLF----KHTLKRLG 121 (418)
T ss_pred CChhHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHH----HHHHHHcC
Confidence 345566666 77889999754 366789999999999999999999999998876543211 01122334
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. +++.++. .|++++++.+++ ++++|++..++||+ ..|+++|+++|+++|+++|+|+++..+.. .
T Consensus 122 ~--~v~~v~~------~d~~~l~~~l~~-~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~-----~ 187 (418)
T TIGR01326 122 I--EVRFVDP------DDPEEFEKAIDE-NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYL-----C 187 (418)
T ss_pred c--EEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhc-----C
Confidence 3 5555542 289999999987 89999999888886 67999999999999999999999865532 2
Q ss_pred CCCC-cccEEEecccccccC--CCCeEEEeeC
Q 009673 300 DPFK-YCDVVTTTTHKSLRG--PRGGMIFFKK 328 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~G--prgG~i~~~~ 328 (529)
.++. ++|++++|+||++.| .+.|++++++
T Consensus 188 ~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 188 RPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred CchhcCCeEEEECccccccCCccceEEEEEec
Confidence 3444 689999999999854 5557666654
No 264
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.73 E-value=9.8e-16 Score=153.76 Aligned_cols=298 Identities=22% Similarity=0.217 Sum_probs=200.9
Q ss_pred HHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh----cCCC----CEEEEcCCCCCccccccccccccccccccceEE
Q 009673 154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----LKPH----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (529)
Q Consensus 154 ~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al----l~pG----D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~ 225 (529)
++|+++..|.+. +.+|+.+|+++-++-++++ ...| +.||+++-.||-+. .+++-++++
T Consensus 115 q~~L~~ITG~Da----vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNP----------ASAam~G~~ 180 (496)
T COG1003 115 QEWLKEITGMDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNP----------ASAAMAGFK 180 (496)
T ss_pred HHHHHHhcCCce----eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCCh----------hhHhhcCce
Confidence 489999999997 7899999997666544443 2233 58999998777653 223333468
Q ss_pred EEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC
Q 009673 226 SMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK 303 (529)
Q Consensus 226 ~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~ 303 (529)
++.++.+ ++|.+|+|+|++++.+ ++.++.+++||.-+ ..++.+|++|.+++|..|..|+|..-+++.. ..|-+
T Consensus 181 VV~V~~~-~~G~VDlddLk~k~~~-~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~---~rPGd 255 (496)
T COG1003 181 VVVVKCD-ENGNVDLDDLRAKAED-NLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGL---ARPGD 255 (496)
T ss_pred EEEEecC-CCCCccHHHHHHHhcc-ceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhcc---ccccc
Confidence 8888887 6799999999999987 88889998888776 4589999999999999999999865554421 23333
Q ss_pred -cccEEEecccccccCCCC------eEEEeeCCCc---ch---h-HHHh-hhc--c----cccCCCCCCChHHHHHHHHH
Q 009673 304 -YCDVVTTTTHKSLRGPRG------GMIFFKKDPV---LG---V-ELES-AIN--N----AVFPGLQGGPHNHTIGGLAV 362 (529)
Q Consensus 304 -~aDiv~~S~hK~l~Gprg------G~i~~~~~~~---~~---~-~l~~-~i~--~----~~~p~~~g~p~~~~iaala~ 362 (529)
++||+-..+||+|+.|.| |-|.+++... .. + +..+ ..+ . .+....+|+..+. ..+.
T Consensus 256 ~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il---~~a~ 332 (496)
T COG1003 256 MGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASIL---PIAW 332 (496)
T ss_pred cccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHH---HHHH
Confidence 789999999999966655 4455544210 00 0 0000 000 0 0011113332222 2222
Q ss_pred H-HHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC--CCceEEEccC----CCCCcHHHHHHhHhcCCeEEcCC
Q 009673 363 C-LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS--DNHLVLVDLR----PMGIDGARVEKILDMASITLNKN 435 (529)
Q Consensus 363 a-l~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt--~~~~~~v~~~----~~~i~~~~~~~~L~~~GI~v~~~ 435 (529)
+ +..+..+++++..+..+-|++++.++|+. .+++...+. ..|-+++|.+ ..|++..++.++|.++|+.....
T Consensus 333 ~YI~~mG~~GL~~ase~AvLNANYia~rL~~-~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~ 411 (496)
T COG1003 333 AYIRMMGADGLKQASEVAVLNANYIARRLKG-YYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTM 411 (496)
T ss_pred HHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh-cCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcc
Confidence 2 33444556777888889999999999986 566654333 5688888887 45788899999999999986544
Q ss_pred CCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHH
Q 009673 436 SVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE 482 (529)
Q Consensus 436 ~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~ 482 (529)
+.|- ..++.+=|-- |..-+++++++.++++..+...+.+
T Consensus 412 ~FPl----iV~~tLMIEP----TEsEsk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 412 YFPL----IVAGTLMIEP----TESESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred cCcc----ccccceeecC----CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4442 1344444421 2235689999999999888776643
No 265
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.73 E-value=1.1e-15 Score=157.31 Aligned_cols=334 Identities=17% Similarity=0.184 Sum_probs=216.2
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC-C
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-P 191 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~-p 191 (529)
-++++.++||.. |...|+|.+.+..|| +.++++||.+. -+.+++|..++..++..+++ |
T Consensus 54 apS~~m~aAM~~-----------GDD~Y~gdpSv~~Le----e~vael~G~E~-----alpthqGRgaE~Il~~~~~~~~ 113 (467)
T TIGR02617 54 AVTQSMQAAMMR-----------GDEAYSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKR 113 (467)
T ss_pred CCCHHHHHHHHc-----------CCcccccCchHHHHH----HHHHHHhCCce-----EEECCCCchHHHHHHHhhcccc
Confidence 478888888863 233467777788888 66788999986 25568999999999999988 8
Q ss_pred CCEEEEcCC----CCCccccccccccccccccccceEEEEEcc--------cC-CCCCCCCHHHHHHHhhhcC---CcEE
Q 009673 192 HDRIMGLDL----PHGGHLSHGFMTPKRRVSGTSIYFESMPYR--------LD-ESTGLVDYDMLEKTAILFR---PKLI 255 (529)
Q Consensus 192 GD~Vl~~~~----~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~--------v~-~~~~~iD~d~le~~i~~~~---pklI 255 (529)
||++.+-.. .|..|+..+ ...+...|. .++.+. ++ +.+|.+|+++|++.|++.. .-.+
T Consensus 114 g~e~g~~~~~~~v~hn~~fett----~g~a~l~G~--~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v 187 (467)
T TIGR02617 114 EQEKGLDRSKMVAFSNYFFDTT----QGHSQINGC--TARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYI 187 (467)
T ss_pred cccccccccccccceEEEEecc----hHHHHHcCc--eeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceee
Confidence 998885443 233222211 112334554 333321 11 1247999999999998632 2222
Q ss_pred EEc---CCCCCCCC---CHHHHHHHHHHhCCEEEEecccccc-c--------ccccccCC-----CCCcccEEEeccccc
Q 009673 256 IAG---ASAYPRDF---DYPRMRQIADAVGALLMMDMAHISG-L--------VAASVVAD-----PFKYCDVVTTTTHKS 315 (529)
Q Consensus 256 i~~---~s~~p~~~---d~~~i~~ia~~~g~~livD~ah~~G-l--------i~~~~~~~-----~~~~aDiv~~S~hK~ 315 (529)
... +...+... ++++++++|++||+.++.|+|-.+. . .+.+..+. -+.++|.++.|++|.
T Consensus 188 ~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKg 267 (467)
T TIGR02617 188 VATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKD 267 (467)
T ss_pred eeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCC
Confidence 222 22223333 5778889999999999999876543 2 12222111 124799999999999
Q ss_pred ccCCCCeEEEeeCCCcchhHHHhhhccc-----ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673 316 LRGPRGGMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (529)
Q Consensus 316 l~GprgG~i~~~~~~~~~~~l~~~i~~~-----~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L 390 (529)
+..|-||+++++++. +.++.++.+.. -|+ ++||.....+.|+++.|.+... .+|.++.....++|.+.|
T Consensus 268 lgApvGg~Lag~d~~--~~~l~~~~~~~~i~~EGf~-tYGGlagrd~ea~a~Gl~e~~~---~~yl~~ri~qv~yl~~~L 341 (467)
T TIGR02617 268 AMVPMGGLLCFKDDS--FFDVYTECRTLCVVQEGFP-TYGGLEGGAMERLAVGLYDGMN---LDWLAYRINQVQYLVNGL 341 (467)
T ss_pred CCCcccceEEecchh--HHHHHHHHHhhcccccCCc-CcCchhHHHHHHHHhhhhhccc---HHHHHHHHHHHHHHHHHH
Confidence 988999999999840 00223333221 122 2567777788899888988754 456777777789999999
Q ss_pred HhcCcEEecCCCCCceEEEccCC-------CCCcHHHH-HHhHhcCCeEE-cCCCC-----CCCCCCCC--CCeEEEccC
Q 009673 391 VELGYKLVSGGSDNHLVLVDLRP-------MGIDGARV-EKILDMASITL-NKNSV-----PGDKSALV--PGGIRIGSP 454 (529)
Q Consensus 391 ~~~G~~v~~~gt~~~~~~v~~~~-------~~i~~~~~-~~~L~~~GI~v-~~~~~-----Pg~~~~~~--~~~iRig~~ 454 (529)
.+.|++++. +..|-+++|... ....+..+ ..+..+.||.. ..+++ |-...... -.-+|+.+|
T Consensus 342 ~~~Gvpi~~--~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~Rlaip 419 (467)
T TIGR02617 342 EEIGVVCQQ--AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIP 419 (467)
T ss_pred HhCCCcEEe--cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccc
Confidence 999999886 346888887432 12233444 34446788863 22222 21111111 246999876
Q ss_pred CCccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 009673 455 AMTTRGFSEKEFVAIADFIHEGVEITLEA 483 (529)
Q Consensus 455 ~~tt~g~~~~d~~~la~~i~~~~~~~~~~ 483 (529)
- |-+|.+.|+.+++.+..+.++...+
T Consensus 420 R---rvyt~~h~d~v~~~~~~~~~~~~~i 445 (467)
T TIGR02617 420 R---ATYTQTHMDFIIEAFKHVKENAPNI 445 (467)
T ss_pred c---ccccHhHHHHHHHHHHHHHhhhhhc
Confidence 4 5588999999999999998876544
No 266
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.73 E-value=3.7e-15 Score=156.87 Aligned_cols=311 Identities=18% Similarity=0.123 Sum_probs=188.2
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhhcCCC-
Q 009673 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILKPH- 192 (529)
Q Consensus 115 ~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs~A~~~~l~all~pG- 192 (529)
+|.+.+++...+.. +.. ...+ |. .....++ .++++++++.+ .+. .+...+|++|+..++..+..+|
T Consensus 61 ~p~v~~ai~~~~~~-~~~--~~~~-~~-~~~~~~l----a~~l~~~~~~~~~~~---v~~~~sgsea~~~al~~~~~~g~ 128 (398)
T PRK03244 61 HPAVVEAVTRQLAT-LGH--VSNL-FA-TEPQIAL----AERLVELLGAPEGGR---VFFCNSGAEANEAAFKLARLTGR 128 (398)
T ss_pred CHHHHHHHHHHHHh-ccC--ccCc-cC-CHHHHHH----HHHHHHhCCCCCCCE---EEEeCchHHHHHHHHHHHHHHCC
Confidence 68899998877643 211 1112 22 1212223 36788888854 221 2445677899999998776677
Q ss_pred CEEEEcCCCCCccccccccccccccccccce----------EEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY----------FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (529)
Q Consensus 193 D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~----------~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~ 262 (529)
++|+..++.|.|+... .....+.. ..+..++ ..|++++++.+.+ ++++|++..+.+
T Consensus 129 ~~ii~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~~~~-~~~aviiep~~~ 194 (398)
T PRK03244 129 TKIVAAEGGFHGRTMG-------ALALTGQPAKRAPFEPLPGGVEHVP------YGDVDALAAAVDD-DTAAVFLEPIQG 194 (398)
T ss_pred CeEEEECCCcCCccHH-------HHhccCCcccccCCCCCCCCceEeC------CCCHHHHHHhhcC-CeEEEEEecccC
Confidence 4677666654333100 01111110 0111111 1478999998865 789999886665
Q ss_pred CC--CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CCCC-C-cccEEEecccccc-cCCCCeEEEeeCCCcc
Q 009673 263 PR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPF-K-YCDVVTTTTHKSL-RGPRGGMIFFKKDPVL 332 (529)
Q Consensus 263 p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~~-~-~aDiv~~S~hK~l-~GprgG~i~~~~~~~~ 332 (529)
++ ..+ +++|.++|++||+++|+|++|. |+...+.. .... . ..|+++ ++|+| +|.|.|++++++
T Consensus 195 ~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pDi~t--~sK~l~~G~~ig~~~~~~---- 267 (398)
T PRK03244 195 EAGVVPPPAGYLAAAREITDRHGALLVLDEVQT-GIGRTGAWFAHQHDGVTPDVVT--LAKGLGGGLPIGACLAFG---- 267 (398)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCcccchHHhhhhhCCCCCEEE--EchhhhCCcccEEEEEcH----
Confidence 54 444 8899999999999999999974 43222211 0011 1 357764 56998 456789999987
Q ss_pred hhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC-CCCCceEEEcc
Q 009673 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG-GSDNHLVLVDL 411 (529)
Q Consensus 333 ~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~-gt~~~~~~v~~ 411 (529)
++.+.+.........+++.. ..++...+|+.+... ++.+++.+..++|.+.|++.+++++.. .....+.++.+
T Consensus 268 --~~~~~~~~~~~~~t~~~~~~-~~aaa~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~i~~ 341 (398)
T PRK03244 268 --PAADLLTPGLHGSTFGGNPV-ACAAALAVLDTIASE---GLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLGIVL 341 (398)
T ss_pred --HHHhhccCCCCcCCCCCCHH-HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEEEEE
Confidence 67666654322223344333 333334456654432 445677777888999998865532221 01234556665
Q ss_pred CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 412 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 412 ~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
... ....+.+.|.++||.+... .+..||++.+.. ++++|++++++.|++++..
T Consensus 342 ~~~--~~~~~~~~l~~~Gv~~~~~---------~~~~iR~~p~~~----~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 342 TAP--VAKAVEAAAREAGFLVNAV---------APDVIRLAPPLI----ITDAQVDAFVAALPAILDA 394 (398)
T ss_pred ecc--HHHHHHHHHHHCCeEEeec---------CCCEEEEECCCc----CCHHHHHHHHHHHHHHHHh
Confidence 321 3456778888899998531 246799997653 4589999999999998864
No 267
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.73 E-value=2.4e-15 Score=158.89 Aligned_cols=323 Identities=18% Similarity=0.126 Sum_probs=188.8
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cCC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~p 191 (529)
.+|.|++++...+.. .+ .++.. ++..+... .+.+.++++++.+.+. .+..+||++|+..++..+ ..+
T Consensus 53 ~~p~v~~a~~~~~~~-~~-~~~~~--~~~~~~~~----~l~~~l~~~~~~~~~~---v~~~~sgsea~~~al~~~~~~~~ 121 (413)
T cd00610 53 NHPEVVEALKEQLAK-LT-HFSLG--FFYNEPAV----ELAELLLALTPEGLDK---VFFVNSGTEAVEAALKLARAYTG 121 (413)
T ss_pred CCHHHHHHHHHHHHh-Cc-CccCc--ccCCHHHH----HHHHHHHHhCCCCCCE---EEEcCcHHHHHHHHHHHHHHHcC
Confidence 578999999877732 11 11110 01122233 3447888999865442 345678889999998876 367
Q ss_pred CCEEEEcCCCCCcccccccccc-----ccccccccceEEEEEcccCC-----CCCCCCHHHHHHHhhhc--CCcEEEEcC
Q 009673 192 HDRIMGLDLPHGGHLSHGFMTP-----KRRVSGTSIYFESMPYRLDE-----STGLVDYDMLEKTAILF--RPKLIIAGA 259 (529)
Q Consensus 192 GD~Vl~~~~~~~g~~s~g~~~~-----~~~i~~~g~~~~~v~~~v~~-----~~~~iD~d~le~~i~~~--~pklIi~~~ 259 (529)
+|+|++.++.+.|......... ........ ..++.++.++ ..+..|+++|++.++.+ ++++|++..
T Consensus 122 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p 199 (413)
T cd00610 122 RKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLL--PGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEP 199 (413)
T ss_pred CCeEEEECCCcCCccHHHHHhcCCccccccCCCCC--CCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEcc
Confidence 9999999987644321110000 00000001 1233333321 11345899999988762 466777764
Q ss_pred CCCC-C-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEeccccccc-CCCCeEEEeeCC
Q 009673 260 SAYP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKD 329 (529)
Q Consensus 260 s~~p-~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~-GprgG~i~~~~~ 329 (529)
.+++ + ..+ +++|.++|++||+++|+|++|. |+...+.. . .... ..|++ |++|++. |.|.|++++++
T Consensus 200 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-g~g~~g~~~~~~~~~~~~d~~--t~sK~l~~g~~~g~~~~~~- 275 (413)
T cd00610 200 IQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT-GFGRTGKMFAFEHFGVEPDIV--TLGKGLGGGLPLGAVLGRE- 275 (413)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhhHhhcCCCCCeE--EEcccccCccccEEEEEcH-
Confidence 4333 2 455 8999999999999999999975 43211110 0 0011 34665 5569984 46779998887
Q ss_pred CcchhHHHhhh--cccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCc--EEec--CCCC
Q 009673 330 PVLGVELESAI--NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY--KLVS--GGSD 403 (529)
Q Consensus 330 ~~~~~~l~~~i--~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~--~v~~--~gt~ 403 (529)
++.+.+ ......+..+++.. .+++..++++.+.. .++.+++.++.+++.+.|++.+. .++. .+ .
T Consensus 276 -----~~~~~~~~~~~~~~~t~~~~~~-~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~ 345 (413)
T cd00610 276 -----EIMDAFPAGPGLHGGTFGGNPL-ACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAEKHPLVGDVRG-R 345 (413)
T ss_pred -----HHHHhhccCCCCCCCCCCcCHH-HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeec-C
Confidence 677765 22222222333333 34444446766543 24567777788888888876321 2211 11 2
Q ss_pred CceEEEccCCCC-------CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 404 NHLVLVDLRPMG-------IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 404 ~~~~~v~~~~~~-------i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
..++++.+.... .+...+.+.|.++||.+.. +. +..+|++.+.. ++++|++++++.|.++
T Consensus 346 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~----~~-----~~~lR~~~~~~----~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 346 GLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRP----SG-----GNVIRLLPPLI----ITEEEIDEGLDALDEA 412 (413)
T ss_pred ceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEee----cC-----CCEEEEECCCc----CCHHHHHHHHHHHHHh
Confidence 345555553321 2345677888889999943 21 46799986543 5689999999998765
No 268
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.72 E-value=2.2e-15 Score=159.39 Aligned_cols=298 Identities=20% Similarity=0.228 Sum_probs=194.6
Q ss_pred CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc
Q 009673 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 189 (529)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all 189 (529)
.+..+++.+.+++...+.... +.++ .| +...++|+.+..++++++|.+.+..+ +.++.||+||+.++.+..
T Consensus 70 ~~~~~~~~a~~~~~~~~~~nl--~d~~--~~---p~a~~~E~~~v~~l~~l~~~~~~~~G--~~t~GgTean~lal~aar 140 (460)
T COG0076 70 CPTRVPPVAAELLVSALNKNL--GDPD--ES---PAAAELEERVVNMLSDLLGAPEEASG--TFTSGGTEANLLALLAAR 140 (460)
T ss_pred CCCCCHHHHHHHHHHHHhhcC--CCcc--cC---hhHHHHHHHHHHHHHHHhCCCCCCce--EEEcChHHHHHHHHHHHH
Confidence 444567788888887775433 2332 12 23568899999999999999754333 334556699998776642
Q ss_pred C-----C---CC------EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCc-E
Q 009673 190 K-----P---HD------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK-L 254 (529)
Q Consensus 190 ~-----p---GD------~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pk-l 254 (529)
+ . +. +|+++.- +|++.- |.+.+.|...+.++ .++.+..+|+++|+++|.+.... +
T Consensus 141 ~~~~~~~~~~~~~~~~~P~ii~s~~---aH~s~~-----Kaa~~lG~~~~~v~--~~~~~~~id~~~l~~~i~~~t~~g~ 210 (460)
T COG0076 141 ERWRKRALAESGKPGGKPNIVCSET---AHFSFE-----KAARYLGLGLRRVP--TVPTDYRIDVDALEEAIDENTIGGV 210 (460)
T ss_pred HHHHHHhhhcccccCCCCeEEecCc---chhHHH-----HHHHHhCCCceeEE--eccCccccCHHHHHHHHHhhccCce
Confidence 1 1 11 5666654 344322 45667777555555 44336899999999999985544 1
Q ss_pred EEEc--CCCCCCCCCHHHHHHHHHHhCCEEEEeccccccccc-ccccCCC----CCcccEEEecccccccCCCC-eEEEe
Q 009673 255 IIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVA-ASVVADP----FKYCDVVTTTTHKSLRGPRG-GMIFF 326 (529)
Q Consensus 255 Ii~~--~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~-~~~~~~~----~~~aDiv~~S~hK~l~Gprg-G~i~~ 326 (529)
|+.. .+..+...|+++|.+||+++++|+++|+|. .|.+. ....... ++++|.++.++||++..|.+ |++++
T Consensus 211 vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~-GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~ 289 (460)
T COG0076 211 VVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAF-GGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLF 289 (460)
T ss_pred EEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccc-cceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEE
Confidence 4333 444555899999999999999999999984 44432 2222222 24799999999999878877 99999
Q ss_pred eCCCcchhHHHhhhccc--ccCC-------CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC-cE
Q 009673 327 KKDPVLGVELESAINNA--VFPG-------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG-YK 396 (529)
Q Consensus 327 ~~~~~~~~~l~~~i~~~--~~p~-------~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G-~~ 396 (529)
+++. ++.+.+... ..++ +.++......++....++.+..++|.+..++..++++++++.|++.| ++
T Consensus 290 rd~e----~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e 365 (460)
T COG0076 290 RDEE----ALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFE 365 (460)
T ss_pred ECHH----HhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcE
Confidence 9851 233322211 1111 12333343556666678887778899999999999999999999976 99
Q ss_pred EecCCCCCceEEEccCCCC-Cc-HHHHHHhHhcCCeEEcC
Q 009673 397 LVSGGSDNHLVLVDLRPMG-ID-GARVEKILDMASITLNK 434 (529)
Q Consensus 397 v~~~gt~~~~~~v~~~~~~-i~-~~~~~~~L~~~GI~v~~ 434 (529)
++.++ .+.++.++... .+ ..+....+++.|..+..
T Consensus 366 ~~~~p---~l~~V~fr~~~~~~~~~~~~~~~~~~gw~v~~ 402 (460)
T COG0076 366 LVNEP---ELPIVAFRLKDDEDTLADLSERLDRRGWQVPA 402 (460)
T ss_pred eecCC---ccceEEEEcCCcccchhchHHHHHhcCceeec
Confidence 88743 33344443211 11 23455666667877754
No 269
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.72 E-value=3.8e-16 Score=162.08 Aligned_cols=289 Identities=21% Similarity=0.245 Sum_probs=177.3
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
|++..+.+| ++++++.|.+. -+...||..|+.+++.+++++||+|++.+..|++....- .......|
T Consensus 53 gnPt~~~le----~~la~Le~g~~-----a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~----~~~l~~~g 119 (386)
T PF01053_consen 53 GNPTVRALE----QRLAALEGGED-----ALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLL----EELLPRFG 119 (386)
T ss_dssp C-HHHHHHH----HHHHHHHT-SE-----EEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHH----HHCHHHTT
T ss_pred ccccHHHHH----HHHHHhhcccc-----eeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhh----hhhhcccC
Confidence 678888888 67788888864 245689999999999999999999999988776643211 01111223
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhC-CEEEEeccccccccccccc
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVG-ALLMMDMAHISGLVAASVV 298 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g-~~livD~ah~~Gli~~~~~ 298 (529)
+++..++ .-|++++++++++ ++++|++..|.||. ..|+++|+++|+++| +++++|.+....+ .
T Consensus 120 --v~v~~~d------~~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~-----~ 185 (386)
T PF01053_consen 120 --VEVTFVD------PTDLEALEAALRP-NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPY-----N 185 (386)
T ss_dssp --SEEEEES------TTSHHHHHHHHCT-TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTT-----T
T ss_pred --cEEEEeC------chhHHHHHhhccc-cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeecccccee-----e
Confidence 3555543 2478999999998 99999999999997 789999999999999 9999999854432 2
Q ss_pred CCCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673 299 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (529)
Q Consensus 299 ~~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (529)
..|+. ++|+++.|.+|++.|.. +|.+++++.. ++.+++.... ...|... ....+. ..++.+ ..+..
T Consensus 186 ~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~----~~~~~l~~~~--~~~G~~~-~p~da~-ll~rgl--~Tl~~ 255 (386)
T PF01053_consen 186 QNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSS----ELYDRLREFR--RLLGATL-SPFDAW-LLLRGL--RTLPL 255 (386)
T ss_dssp C-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHH----HHHHHHHHHH--HHHT-B---HHHHH-HHHHHH--TTHHH
T ss_pred eccCcCCceEEEeeccccccCCcceeeEEEEECchh----hhhhhhcchh--hhcCccc-hHHHHH-HHhcCC--CcHHH
Confidence 35666 79999999999998876 5888877621 4555443221 1112211 112211 123333 23567
Q ss_pred HHHHHHHHHHHHHHHHHhc-CcE-EecCCC---------------CCceEEEccCCCCCcHHHHHHhHhcCCeE---EcC
Q 009673 375 YQNKVVSNCRALASRLVEL-GYK-LVSGGS---------------DNHLVLVDLRPMGIDGARVEKILDMASIT---LNK 434 (529)
Q Consensus 375 ~~~~i~~~a~~l~~~L~~~-G~~-v~~~gt---------------~~~~~~v~~~~~~i~~~~~~~~L~~~GI~---v~~ 434 (529)
++++..+|+..+++.|++. .+. |..++- ...++.+++.. ..+.+.+.++...+. ++.
T Consensus 256 R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~---~~~~~~~f~~~l~l~~~~~Sl 332 (386)
T PF01053_consen 256 RMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKG---GEEAARRFLDALKLFSIAPSL 332 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESS---HHHHHHHHHHH-SSSEESSS-
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEecc---chhhhHhHHhhhhhHhhhhhc
Confidence 8899999999999999984 443 332211 11244555542 113555666555543 221
Q ss_pred CC------CCCCC------------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 435 NS------VPGDK------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 435 ~~------~Pg~~------------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+. .|... ....++-||+++. -||.+.|.+-|+++++
T Consensus 333 Gg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvG--------lEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 333 GGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVG--------LEDPDDLIADLEQALE 386 (386)
T ss_dssp SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE----------SS-HHHHHHHHHHHHH
T ss_pred CCcccccccccchhhccCChhhhhccCCCCCeeEEEec--------cCCHHHHHHHHHHhcC
Confidence 11 13211 0112356899864 2788888888877764
No 270
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.72 E-value=3.3e-15 Score=144.79 Aligned_cols=340 Identities=17% Similarity=0.165 Sum_probs=226.3
Q ss_pred cceeEecCC-CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 009673 103 KSLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (529)
Q Consensus 103 ~~i~L~ase-n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~ 181 (529)
+.|.|..+. .-.|+.+...........|.++...+...+-..|.+.-|. .-++++.+.|+...+ |.++.+++.|
T Consensus 31 ~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~-lgdklApLiGA~~~E----vvv~dtts~n 105 (407)
T COG3844 31 GVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPER-LGDKLAPLIGARAGE----VVVTDTTSIN 105 (407)
T ss_pred CeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhH-HHHHhhhhhcCCCCc----eEEeCCcchH
Confidence 456665433 2457677777777777778776554433333445554443 448899999999865 3346666665
Q ss_pred HH-HHHhh--cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 182 FE-VYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 182 ~~-~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
.. ++.+. ..+|++|+++.-. ...+ .++....-+...+.. +++ .+.++++++++.+++ .+.+|+++
T Consensus 106 l~k~L~aalr~~~~r~vIv~E~~--~fpT-dly~a~g~~~~~~~~-----~~~---~~~~~P~~~~~~~~d-d~AvV~L~ 173 (407)
T COG3844 106 LFKVLAAALRPQEGRRVIVSEGD--NFPT-DLYIAEGLADLLGIG-----YDL---EGVIAPRALEEAITD-DVAVVLLS 173 (407)
T ss_pred HHHHHHHHhccCCCceEEeecCC--CCCc-chhhhcchhhhhccc-----ccc---eeeeChHHHHHhhcc-ceEEEEec
Confidence 53 44444 3469999987632 2222 222222222223321 222 256788899999988 78888888
Q ss_pred CCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccccccc-CCCC-eEEEeeCCC----
Q 009673 259 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLR-GPRG-GMIFFKKDP---- 330 (529)
Q Consensus 259 ~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~-Gprg-G~i~~~~~~---- 330 (529)
..+|-+ ..|+.+|..+|++||++++.|-||++|.++.+.+.. ++|+-++++||.|. ||.+ +++++.++.
T Consensus 174 ~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~---gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~ 250 (407)
T COG3844 174 HVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAA---GADFAIGCSYKYLNGGPGAPAGLFVAPRHRERS 250 (407)
T ss_pred cccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeeccc---CCCeeeeeeceeccCCCCCceeEEecccccccc
Confidence 777665 789999999999999999999999999886655444 69999999999995 4555 788887642
Q ss_pred -----cch-----hHHHhhhcc--cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cC
Q 009673 331 -----VLG-----VELESAINN--AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LG 394 (529)
Q Consensus 331 -----~~~-----~~l~~~i~~--~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G 394 (529)
.++ +.+.+.... ....+.+|++.+..++++..+|+.....+..+.+++.....+++.+.++. .+
T Consensus 251 ~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~ 330 (407)
T COG3844 251 WPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYG 330 (407)
T ss_pred ccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCC
Confidence 011 111111111 11123468888888898888888776666778888888888888877765 26
Q ss_pred cEEecCC----CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673 395 YKLVSGG----SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 470 (529)
Q Consensus 395 ~~v~~~g----t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la 470 (529)
+++.++. ..+|..+ ... .+..+.+.|.++||+.+.. .|+.+|++...+.+ +-+|+=..+
T Consensus 331 l~l~tPr~~~~rGsqvS~---~hp--~~~~V~qaLi~rGVigD~R---------~P~vlRfgftPlY~---~~~DVw~AV 393 (407)
T COG3844 331 LTLVTPRAHEERGSQVSL---YHP--HGYQVMQALIDRGVIGDFR---------EPDVLRFGFTPLYV---SFVDVWDAV 393 (407)
T ss_pred cEEeccchhhhccceeeE---ecC--cHHHHHHHHHHcCcccccc---------CCCeeeecCcccee---chhHHHHHH
Confidence 7787752 1234322 221 4788999999999997542 47889999754442 368898899
Q ss_pred HHHHHHHHH
Q 009673 471 DFIHEGVEI 479 (529)
Q Consensus 471 ~~i~~~~~~ 479 (529)
+.|.+++..
T Consensus 394 ~~L~evL~t 402 (407)
T COG3844 394 DALEEVLDT 402 (407)
T ss_pred HHHHHHHHh
Confidence 999888864
No 271
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.71 E-value=1.6e-15 Score=155.84 Aligned_cols=217 Identities=23% Similarity=0.224 Sum_probs=149.8
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
|++..+.+| +.++++=|.+. -+...||..|+..++.+++++||+|+..+..||+.+... .+-..-.|
T Consensus 61 ~nPT~~~lE----~~~a~LEg~~~-----~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~----~~~l~~~g 127 (396)
T COG0626 61 GNPTRDALE----EALAELEGGED-----AFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLF----EKILQKFG 127 (396)
T ss_pred CCccHHHHH----HHHHHhhCCCc-----EEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHH----HHHHHhcC
Confidence 577788888 56677777775 255699999999999999999999999988777654211 01111122
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
+++..++ .-|.+++++.+.+.++|+|++..|.||+ ..|+++|+++|+++|+.+++|.+-..+ ...
T Consensus 128 --i~~~~~d------~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP-----~~q 194 (396)
T COG0626 128 --VEVTFVD------PGDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATP-----VLQ 194 (396)
T ss_pred --eEEEEEC------CCChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccc-----ccc
Confidence 3444433 2244566666663489999999999998 789999999999999999999984443 345
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhccccc--CCCCCCChHHHHHHHHHHHHHhcCchHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF--PGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~--p~~~g~p~~~~iaala~al~~~~~~~~~ 373 (529)
.|++ ++|||+.|.+|.+.|.. +|+++++++ ++.+.+..... .|..-+|. -| ...++-+. -+.
T Consensus 195 ~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~-----~~~~~~~~~~~~~~G~~l~p~----dA-~l~lRGlk--TL~ 262 (396)
T COG0626 195 RPLELGADIVVHSATKYLGGHSDVLGGVVLTPNE-----ELYELLFFAQRANTGAVLSPF----DA-WLLLRGLR--TLA 262 (396)
T ss_pred ChhhcCCCEEEEeccccccCCcceeeeEEecChH-----HHHHHHHHHHHhhcCCCCCHH----HH-HHHHhccc--hHH
Confidence 6776 79999999999998754 387776664 55555422111 12222221 11 22334332 356
Q ss_pred HHHHHHHHHHHHHHHHHHh-cCcE
Q 009673 374 VYQNKVVSNCRALASRLVE-LGYK 396 (529)
Q Consensus 374 ~~~~~i~~~a~~l~~~L~~-~G~~ 396 (529)
.++++..+|+..+++.|++ +.+.
T Consensus 263 ~Rm~~~~~nA~~IA~~L~~~p~V~ 286 (396)
T COG0626 263 LRMERHNENALKIAEFLADHPKVK 286 (396)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeE
Confidence 7789999999999999988 3443
No 272
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.71 E-value=1.8e-15 Score=150.60 Aligned_cols=281 Identities=18% Similarity=0.215 Sum_probs=186.3
Q ss_pred eeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccc-cccceEEEEEcccCCC-CCCCCHHHHHHHh
Q 009673 171 NVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDES-TGLVDYDMLEKTA 247 (529)
Q Consensus 171 ~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~-~~g~~~~~v~~~v~~~-~~~iD~d~le~~i 247 (529)
+|.++.|+ .||.++...|.+|||.-|++.|.|+|.-- .++ ..| ++++++.++.. ++.++.+++|.+.
T Consensus 148 ~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdr--------dl~~rTg--veivpv~c~Ss~~f~itv~alE~A~ 217 (471)
T KOG0256|consen 148 RVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDR--------DLRWRTG--VEIVPVHCSSSNGFQITVEALEAAL 217 (471)
T ss_pred ceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccc--------cceeccC--ceEEEEEeecCCCccccHHHHHHHH
Confidence 34446665 99999999999999999999998887522 222 234 47778777654 4799999998877
Q ss_pred hh-----cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC-C-------ccc--E
Q 009673 248 IL-----FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-------YCD--V 307 (529)
Q Consensus 248 ~~-----~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~-------~aD--i 307 (529)
.+ .+.|.|++.+|+||- .. .+..+...|.++|+.||+|+. |+|-++....-.++ + ..| -
T Consensus 218 ~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEI-ya~sVF~~~~F~Sv~ev~~~~~~~~~rvH 296 (471)
T KOG0256|consen 218 NQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEI-YAGSVFDKSEFRSVLEVRKDPHLDPDRVH 296 (471)
T ss_pred HHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehh-hcccccCccCceEHHHHhhccccCCCcEE
Confidence 53 367888888888884 33 466777888999999999998 66766553211111 1 112 4
Q ss_pred EEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 009673 308 VTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (529)
Q Consensus 308 v~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~ 385 (529)
++.|++|-| +|.|.|.|+..++ ++.....+....+..++...+.++++- +=++..+....+..+++..+.++
T Consensus 297 ivyslSKD~GlpGfRvGviYS~ne-----~VvsaA~kmssf~~vSs~tQ~~la~LL-SD~~f~~~yl~en~~Rl~~rh~~ 370 (471)
T KOG0256|consen 297 IVYSLSKDFGLPGFRVGVIYSNNE-----DVVSAATKMSSFGLVSSQTQYLLASLL-SDEEFTREYLRENNKRLRIRHRY 370 (471)
T ss_pred EEEEeccccCCCceEEEEEEecCh-----HHHHHHHHHhhccCCcHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHH
Confidence 678999965 7888899999886 676666554333332222222233221 11222222236667788888889
Q ss_pred HHHHHHhcCcEEecCCCCCceEEEccCCC----CCcHH--HHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCcc
Q 009673 386 LASRLVELGYKLVSGGSDNHLVLVDLRPM----GIDGA--RVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTT 458 (529)
Q Consensus 386 l~~~L~~~G~~v~~~gt~~~~~~v~~~~~----~i~~~--~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt 458 (529)
+.+.|++.|++++..+ ..-++|+|++.. ...++ -..+.+++.++.++ ||.. -...+|++|+.+..
T Consensus 371 ~~~gLk~lgI~cl~s~-AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlS----pG~s~~C~EpGWFRvcFAn--- 442 (471)
T KOG0256|consen 371 IVEGLKALGIPCLKSN-AGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLS----PGSSCHCHEPGWFRVCFAN--- 442 (471)
T ss_pred HHhhHHhcCCceeecC-CeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccC----CCCcceecCCCeEEEEecc---
Confidence 9999999999998753 345678898642 11221 24566677788884 5544 34568999998754
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 009673 459 RGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 459 ~g~~~~d~~~la~~i~~~~~ 478 (529)
+.++.++...++|+..+.
T Consensus 443 --~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 443 --MSEETLEVAMRRLKQFLD 460 (471)
T ss_pred --CCHHHHHHHHHHHHHHHH
Confidence 556666667777777665
No 273
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.71 E-value=3.3e-15 Score=154.45 Aligned_cols=295 Identities=13% Similarity=0.145 Sum_probs=191.5
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc-CCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all-~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
.++.+.++ .+.+.++++|+.+.+ +.+.+...|||.++.+++..++ ++||+|++.. .++..+.. +.....|
T Consensus 35 ~~F~~i~~-e~~~~L~~l~~~~~~-~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-----~FG~r~~~--eia~~~g 105 (374)
T TIGR01365 35 KLGKEKLA-EAIKKTREMLGVPAD-YLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-----SFGKGWVT--DVTKQLK 105 (374)
T ss_pred HHHHHHHH-HHHHHHHHHhCCCCC-cEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-----HHHHHHHH--HHHHhcC
Confidence 44545444 566899999998543 3355667889999999999999 5899999753 33332210 1122344
Q ss_pred ce-EEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC--CCCCCCCHHHHHHHHHHhCCEEEEeccccccccccccc
Q 009673 222 IY-FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS--AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (529)
Q Consensus 222 ~~-~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s--~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~ 298 (529)
.. +..+. .+ .+..+|+++++. +.. |++++. +.+...|++++.... +++++++|+....|..
T Consensus 106 ~~~v~~l~--~~-~g~~~~~~~ve~-----~~~-v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~----- 169 (374)
T TIGR01365 106 LPDVRVLE--AE-YGKLPDLKKVDF-----KND-VVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQ----- 169 (374)
T ss_pred CCCcEEEc--CC-CCCCCCHHHcCC-----CCC-EEEecCCCchheecccccccccc--CCCcEEEEccchhcCC-----
Confidence 41 33333 22 456889999872 122 444433 344467776655322 5899999997666543
Q ss_pred CCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcc---------------------ccc-CCCCCCChHH
Q 009673 299 ADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN---------------------AVF-PGLQGGPHNH 355 (529)
Q Consensus 299 ~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~---------------------~~~-p~~~g~p~~~ 355 (529)
+..++.+|++++|.+|+|.+|.| ++++.+++ ..++++. ... ..+..+|+.+
T Consensus 170 ~l~~d~iDv~~tgsQK~L~~ppGls~v~vs~~------Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~ 243 (374)
T TIGR01365 170 DLDYHKLDVVTFSWQKVLGGEGAHGMLILSPR------AVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSML 243 (374)
T ss_pred CCChhHCcEEEEechhccCCCCceEEEEECHH------HHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHH
Confidence 22233589999999999999999 89999884 2221110 000 1223466777
Q ss_pred HHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcC-cEEecC--CCCCceE-EEccCCCCC-----c-----HHH
Q 009673 356 TIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-YKLVSG--GSDNHLV-LVDLRPMGI-----D-----GAR 420 (529)
Q Consensus 356 ~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G-~~v~~~--gt~~~~~-~v~~~~~~i-----~-----~~~ 420 (529)
.+.++..+++.+..+ +++++.++..++++.+++.+++.| +.++.. ...++.+ .+.+...++ + ..+
T Consensus 244 ~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~ 323 (374)
T TIGR01365 244 CVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKE 323 (374)
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHH
Confidence 777777778766554 689999999999999999999998 776652 2223322 233433333 2 577
Q ss_pred HHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 421 ~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
+.+.|.+.||.+..+ - +...+..+|||+... ++.+|++.+.++|+=+.
T Consensus 324 ~~~~l~~~gi~i~~G----~-~~~~~~~fRIg~~G~----i~~~di~~l~~~l~~~~ 371 (374)
T TIGR01365 324 LISTLEKEGVAYDIG----S-YRDAPSGLRIWCGAT----VEKSDLECLCPWLDWAF 371 (374)
T ss_pred HHHHHHHCCEEEecc----c-cccCCCceEEecCCc----CCHHHHHHHHHHHHHHH
Confidence 889998899998432 2 122347899997543 56899999999987554
No 274
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.70 E-value=5.2e-15 Score=154.62 Aligned_cols=314 Identities=16% Similarity=0.140 Sum_probs=185.0
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCC
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 191 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~p 191 (529)
..+|+|.+++...+.+... ....+ ..+++....+++.+.++.+. .+..+||++|+..++... ..+
T Consensus 45 ~~~p~v~~a~~~~~~~~~~---~~~~~------~~~~~~~la~~l~~~~~~~~-----~~~~~sG~~a~~~A~~~a~~~~ 110 (377)
T PRK02936 45 HCHPTVTKAVQEQLDDIWH---VSNLF------TNSLQEEVASLLAENSAGDL-----VFFCNSGAEANEAALKLARKHT 110 (377)
T ss_pred CCCHHHHHHHHHHHHhccc---ccccc------CCHHHHHHHHHHHhcCCCCE-----EEEeCCcHHHHHHHHHHHHHhc
Confidence 3578899998887754221 11111 12334344466666665432 345689999999988843 334
Q ss_pred C-CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC---CCCCHHHHHHHhhhcCCcEEEEcCCCCCC--
Q 009673 192 H-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAILFRPKLIIAGASAYPR-- 264 (529)
Q Consensus 192 G-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~~---~~iD~d~le~~i~~~~pklIi~~~s~~p~-- 264 (529)
| ++|++.+..+.|....+ +...+.. ...-..++.++. -..|++++++.+.+ ++++|++....+.+
T Consensus 111 g~~~vi~~~~~~Hg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~ii~e~i~~~~G~ 182 (377)
T PRK02936 111 GKSKIVTFEQSFHGRTFGT-------MSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE-EVAAVMLEVVQGEGGV 182 (377)
T ss_pred CCCeEEEECCCcCCCcHHh-------hhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC-CeEEEEEecccCCCCC
Confidence 5 67888876543221111 1111110 000000111010 01278999999876 78888886443222
Q ss_pred ----CCCHHHHHHHHHHhCCEEEEecccccccccccccCC--CCC-cccEEEecccccc-cCCCCeEEEeeCCCcchhHH
Q 009673 265 ----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVEL 336 (529)
Q Consensus 265 ----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~-~aDiv~~S~hK~l-~GprgG~i~~~~~~~~~~~l 336 (529)
..++++|+++|++||+++|+|++| .|+...+.... .+. ..|++ +++|++ +|+|+|++++++ ++
T Consensus 183 ~~~~~~~l~~l~~l~~~~~~~lI~DEv~-~g~g~~g~~~~~~~~~~~~di~--t~sK~l~~G~~ig~v~~~~------~~ 253 (377)
T PRK02936 183 IPADPAFLQEVQTLCKKFGALLIIDEVQ-TGIGRTGTLFAYEQFGLDPDIV--TVAKGLGNGIPVGAMIGKK------EL 253 (377)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCchhhHHHhhCCCCcEE--EEcccccCCCccEEEEEcH------HH
Confidence 234899999999999999999997 46543331100 011 24665 578998 567899999987 67
Q ss_pred HhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEecC-CCCCceEEEccCC
Q 009673 337 ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSG-GSDNHLVLVDLRP 413 (529)
Q Consensus 337 ~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~~-gt~~~~~~v~~~~ 413 (529)
.+.+.........+++.. ..++..++++.... .++.+++.++.+.+.+.|++. ++..+.. .....++++++..
T Consensus 254 ~~~~~~~~~~~t~~~~~~-~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~ 329 (377)
T PRK02936 254 GTAFGPGSHGSTFGGNPL-AMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTE 329 (377)
T ss_pred HhhccCCCCCCCCCCCHH-HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecc
Confidence 776654332233344333 44444446765432 245567777888888888762 3332221 0123566777653
Q ss_pred CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 414 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 414 ~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
+...+.+.|.+.||.+. |+ ..+.|||+.+.. .++++++++++.|.+++
T Consensus 330 ---~~~~~~~~l~~~gv~v~----~~-----g~~~lRi~p~~~----~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 330 ---EVAPVIEQLREEGLLVL----SA-----GPNVIRLLPPLV----VTKEELDQAVYLLKKVL 377 (377)
T ss_pred ---hHHHHHHHHHHCCeEEe----cC-----CCCEEEEECCcc----cCHHHHHHHHHHHHHhC
Confidence 24667788889999983 32 246899986543 56899999999997753
No 275
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.70 E-value=4.6e-15 Score=140.25 Aligned_cols=323 Identities=17% Similarity=0.201 Sum_probs=204.0
Q ss_pred cceeEec--CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCC-C------chhHHHHHHHHHHHHHHHcCCCCCCCceeee
Q 009673 103 KSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG-G------NEYIDELETLCQKRALAAFNLDENKWGVNVQ 173 (529)
Q Consensus 103 ~~i~L~a--sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~-g------~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~ 173 (529)
+.||+.+ --..++++.++|+-. |..||.--.|.. | .+.+..+- +.+++++|.|. +.
T Consensus 16 ~~iNv~PiQrGGiLt~eArkal~E-----~gDGYSvCD~C~~Grldei~kPpI~~F~----~dlaeFlg~D~------~R 80 (382)
T COG1103 16 GFINVNPIQRGGILTEEARKALLE-----WGDGYSVCDFCLEGRLDEITKPPIKDFL----EDLAEFLGMDE------VR 80 (382)
T ss_pred CccccChhhccCcCCHHHHHHHHH-----hcCCcchhhhhccCccccccCCcHHHHH----HHHHHHhCCce------ee
Confidence 5677655 334678999999863 445554322221 1 12222222 34889999985 45
Q ss_pred cCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-CCCCCCCHHHHHHHhhhc-
Q 009673 174 PLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILF- 250 (529)
Q Consensus 174 ~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-~~~~~iD~d~le~~i~~~- 250 (529)
+|.|+ +|-++++.+++++||.|++..+.| ++..- +....|. ++..+|-. ...+.+++|...+.|++.
T Consensus 81 ~t~GARe~KfavMhal~~~gd~vV~D~~aH---Yttyv-----AAEragl--~v~eVp~tg~Pey~i~~e~y~~viee~~ 150 (382)
T COG1103 81 VTAGAREAKFAVMHALCKEGDWVVVDSLAH---YTTYV-----AAERAGL--NVAEVPNTGYPEYKITPEGYAEVIEEVK 150 (382)
T ss_pred ecccchhhHHHHHHHhccCCCEEEEcCcch---HHHHH-----HHHhcCC--eEEecCCCCCCceEecHHHHHHHHHHHH
Confidence 59999 999999999999999999887644 43221 2334454 55555521 113577887766655431
Q ss_pred -----CCcEEEEcCC--CCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccccC-CCC
Q 009673 251 -----RPKLIIAGAS--AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRG-PRG 321 (529)
Q Consensus 251 -----~pklIi~~~s--~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~G-prg 321 (529)
.|.+.++.++ +|+...|.+++++||+++|++++...|+..|-.+.. .-+ ++|++++|.||+++. .+.
T Consensus 151 ~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs----~ke~g~DFiVgSGHKsmAAs~Pi 226 (382)
T COG1103 151 DEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVS----GKEIGADFIVGSGHKSMAASAPI 226 (382)
T ss_pred hccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeecccccc----ccccCCCEEEecCccchhccCCe
Confidence 2667777754 566688999999999999999999999877754322 112 799999999999843 345
Q ss_pred eEEEeeCCCcchhHHHhhhccc--c-cC-------C--CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 009673 322 GMIFFKKDPVLGVELESAINNA--V-FP-------G--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 389 (529)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~--~-~p-------~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~ 389 (529)
|++..+. ++.+.+-+. . ++ | ..|.|....+|++-...+.+ ....+-+++++.+.+.
T Consensus 227 Gvl~~~e------E~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRV------krWdeEv~kaR~fv~e 294 (382)
T COG1103 227 GVLAMSE------EWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERV------KRWDEEVEKARWFVAE 294 (382)
T ss_pred eEEeehh------HHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHH------HHHHHHHHHHHHHHHH
Confidence 8888877 565543211 0 11 1 24555555555544333332 2234456678899999
Q ss_pred HHhcC-cEEecCCCCCceE-EEccCCC-------CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCC
Q 009673 390 LVELG-YKLVSGGSDNHLV-LVDLRPM-------GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG 460 (529)
Q Consensus 390 L~~~G-~~v~~~gt~~~~~-~v~~~~~-------~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g 460 (529)
|.+.| +..+.....+|-. .+..+.. .-.+-++.+.|.+.||.-- -|| ....+.+|+ .|
T Consensus 295 lEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI---~~G-----~Tk~~K~sv-----yG 361 (382)
T COG1103 295 LEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGI---QPG-----QTKYFKLSV-----YG 361 (382)
T ss_pred HHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCcccc---ccC-----ceeEEEEEe-----ec
Confidence 99864 7665533334422 2211100 0123457788888888631 233 245677764 68
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 009673 461 FSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 461 ~~~~d~~~la~~i~~~~~~ 479 (529)
+++|+++++++.++++++.
T Consensus 362 l~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 362 LSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 8999999999999998864
No 276
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.69 E-value=1.1e-14 Score=152.98 Aligned_cols=310 Identities=16% Similarity=0.136 Sum_probs=180.3
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCC--
Q 009673 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH-- 192 (529)
Q Consensus 115 ~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pG-- 192 (529)
.|.|.+++...+... .. .... |. .+. .....+++++++|.+. .+...+|++|+.+++..+..++
T Consensus 57 ~p~v~~a~~~~~~~~-~~--~~~~-~~-~~~----~~~la~~l~~~~~~~~-----v~~~~gg~eA~~~al~~a~~~~~~ 122 (396)
T PRK02627 57 HPKLVEAIQEQAAKL-IH--TSNL-YY-IEP----QEELAEKLVELSGMDK-----VFFCNSGAEANEAAIKLARKYGHK 122 (396)
T ss_pred CHHHHHHHHHHHhhc-cc--cccc-cC-CHH----HHHHHHHHHhhcCCCE-----EEECCCcHHHHHHHHHHHHHHhcc
Confidence 478888888766432 11 1111 11 222 2233477778777642 2445677799999998765444
Q ss_pred -----CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCCC----CCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673 193 -----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDESTG----LVDYDMLEKTAILFRPKLIIAGASAY 262 (529)
Q Consensus 193 -----D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~~~----~iD~d~le~~i~~~~pklIi~~~s~~ 262 (529)
++|++.++.+.|.. .. .+...+.. +.....++. .+. ..|++++++.+.+ ++++|++..+++
T Consensus 123 ~~~~~~~ii~~~~~yhg~~-----~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~i~~-~~~~vii~p~~~ 193 (396)
T PRK02627 123 KGIEKPEIITAENSFHGRT-----LA--TLSATGQPKYQEGFEPLV-EGFIYVPFNDIEALKAAITD-KTAAVMLEPIQG 193 (396)
T ss_pred cCCCCCeEEEECCCcCccc-----HH--HHHhcCCccccccCCCCC-CCceEeCCCCHHHHHHhcCC-CeEEEEEecccC
Confidence 67888877653221 10 11111110 000011111 111 2389999999976 789999876554
Q ss_pred CC---C---CCHHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-cccEEEecccccc-cCCCCeEEEeeCCCc
Q 009673 263 PR---D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSL-RGPRGGMIFFKKDPV 331 (529)
Q Consensus 263 p~---~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~aDiv~~S~hK~l-~GprgG~i~~~~~~~ 331 (529)
++ . ..+++|.++|++||+++|+|++|. |+...+.. .++ . ..|++ +++|.+ +|.|.|++++++
T Consensus 194 ~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~-g~g~~g~~-~~~~~~~~~pdi~--t~sK~~~~G~rig~~~~~~--- 266 (396)
T PRK02627 194 EGGVNPADKEYLQALRELCDENGILLILDEVQT-GMGRTGKL-FAYQHYGIEPDIM--TLAKGLGGGVPIGAVLAKE--- 266 (396)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-CCCccCce-eeehhcCCCCCEE--EEcchhhCCcccEEEEEcH---
Confidence 43 1 248899999999999999999965 54333211 111 1 24665 467998 567889999987
Q ss_pred chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEec--CCCCCceE
Q 009673 332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS--GGSDNHLV 407 (529)
Q Consensus 332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~--~gt~~~~~ 407 (529)
++.+.+.........+++.. ..++...+++.... .++.+++.++.+.+.+.|.+. .+..+. .+ ...++
T Consensus 267 ---~~~~~~~~~~~~~t~~~~~~-~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~ 338 (396)
T PRK02627 267 ---KVADVFTPGDHGSTFGGNPL-ACAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEKYPGIKEVRG-LGLMI 338 (396)
T ss_pred ---HHHhccCCCCCCCCCCCCHH-HHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeeeecc-CcEEE
Confidence 67766654322223333333 33343445665433 234566666677777766552 121111 11 23455
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
++.+. .+..++.+.|.+.||.+.. + ..+.+||+.+.. +++++++++.+.|++++.
T Consensus 339 ~i~~~---~~~~~~~~~l~~~Gv~v~~----~-----~~~~lRi~~~~~----~~~~~i~~~~~~l~~~l~ 393 (396)
T PRK02627 339 GIELD---RPAAEIVKKALEKGLLINV----T-----GDNVLRLLPPLI----ISKEEIDEAVDRLEEVLK 393 (396)
T ss_pred EEEec---CcHHHHHHHHHHCCeEEee----c-----CCCEEEEECCcc----cCHHHHHHHHHHHHHHHH
Confidence 66552 2456677777677999943 2 236799986532 468999999999988775
No 277
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.68 E-value=4.6e-14 Score=148.61 Aligned_cols=318 Identities=14% Similarity=0.097 Sum_probs=183.8
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---- 189 (529)
-+|.|.+++...+. .+..+. +.+ ..+...++ .+.++++++.+. .+..+||++|+..++..+.
T Consensus 48 ~~p~v~~a~~~~~~-~~~~~~---~~~-~~~~~~~~----~~~l~~~~~~~~-----~~~~~SGs~A~e~al~~~~~~~~ 113 (400)
T PTZ00125 48 CHPKILAALINQAQ-KLTLTS---RAF-YNDVLGLA----EKYITDLFGYDK-----VLPMNSGAEAGETALKFARKWGY 113 (400)
T ss_pred CCHHHHHHHHHHHH-hccccc---ccc-cCHHHHHH----HHHHHhCCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 57899999987763 332221 111 12223333 366777777643 3557899999999888663
Q ss_pred ------CCCCEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCC---CCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 190 ------KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES---TGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 190 ------~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~---~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
..+++|+..+-.+.|.... .+...+.. +.....+..+. -...|++++++.++..++++|++..
T Consensus 114 ~~~~~~~~~~~vl~~~~~~Hg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep 186 (400)
T PTZ00125 114 EVKGIPENQAKIIFCNGNFSGRTIG-------ACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEP 186 (400)
T ss_pred hccCCCCCCCeEEEECCCcCCccHH-------HHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcC
Confidence 1357788777543222100 11111110 00000000000 0124899999998633789999876
Q ss_pred CCCCC--CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CCCCC--cccEEEecccccccC--CCCeEEEeeC
Q 009673 260 SAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSLRG--PRGGMIFFKK 328 (529)
Q Consensus 260 s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~~~--~aDiv~~S~hK~l~G--prgG~i~~~~ 328 (529)
+.+++ ..+ +++|.++|++||+++|+|++|. |+...+.. ..... ..|++++ +|++.| ++.|++++++
T Consensus 187 ~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~-g~g~~G~~~~~~~~~~~pd~~~~--sK~l~~g~~~ig~v~~~~ 263 (400)
T PTZ00125 187 IQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQT-GLGRTGKLLAHDHEGVKPDIVLL--GKALSGGLYPISAVLAND 263 (400)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhHHHhcCCCCCEEEE--cccccCCCcCcEEEEEcH
Confidence 65554 454 9999999999999999999974 44222211 11111 2577765 499854 4779999988
Q ss_pred CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----CcE-EecCCCC
Q 009673 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GYK-LVSGGSD 403 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~----G~~-v~~~gt~ 403 (529)
++.+.+.........+++... .++...+++.+...++ .+++.+..+.+.+.|++. ++. .+.+ .
T Consensus 264 ------~~~~~~~~~~~~~t~~~~~~~-~~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~--~ 331 (400)
T PTZ00125 264 ------DVMLVIKPGEHGSTYGGNPLA-CAVAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPWVKEIRG--K 331 (400)
T ss_pred ------HHHhhccCCCCCCCCCcCHHH-HHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCCeEEEec--c
Confidence 677766543222233443333 3333345666543333 345555666677777652 221 1222 2
Q ss_pred CceEEEccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 404 NHLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 404 ~~~~~v~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
..+.++.+.. .+.+...+.+.|.++||.+. |+ ....|||+.+.. ++++|++++.+.|.+++...
T Consensus 332 g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~----~~-----~~~~lRi~~~~~----~~~~~i~~~l~~l~~~l~~~ 396 (400)
T PTZ00125 332 GLLNAIVFDHSDGVNAWDLCLKLKENGLLAK----PT-----HDNIIRFAPPLV----ITKEQLDQALEIIKKVLKSF 396 (400)
T ss_pred cEEEEEEEccCcchHHHHHHHHHHHCCeEEe----ec-----CCCEEEEECCcc----CCHHHHHHHHHHHHHHHHHH
Confidence 2344454432 23345567777778899984 32 246899997633 56899999999999887643
No 278
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.67 E-value=3.4e-14 Score=149.80 Aligned_cols=309 Identities=15% Similarity=0.104 Sum_probs=184.0
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
.-+|+|.+++...+.+....+. ....+...+++ ++++++++.+. ....+||++||..++....
T Consensus 56 h~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~----~~l~~~~~~~~-----~~~~~sGseA~e~a~klar~~~ 121 (403)
T PRK05093 56 HCHPALVKALKEQGEKLWHISN-----VFTNEPALRLA----KKLIDATFAER-----VFFANSGAEANEAAFKLARRYA 121 (403)
T ss_pred CCCHHHHHHHHHHHHhcCcccC-----ccCCHHHHHHH----HHHHhhCCCCE-----EEEeCchHHHHHHHHHHHHHHH
Confidence 3588999999887754221111 11222223333 66777776542 2456899999999887541
Q ss_pred -----CCCCEEEEcCCC-CCccccccccccccccccccce-----E-----EEEEcccCCCCCCCCHHHHHHHhhhcCCc
Q 009673 190 -----KPHDRIMGLDLP-HGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILFRPK 253 (529)
Q Consensus 190 -----~pGD~Vl~~~~~-~~g~~s~g~~~~~~~i~~~g~~-----~-----~~v~~~v~~~~~~iD~d~le~~i~~~~pk 253 (529)
...++|+..+-. ||.+.. .++..+.. + ..+.++ ..|++++++.+.+ +++
T Consensus 122 ~~~~~~~~~~ii~~~~~~HG~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~a 186 (403)
T PRK05093 122 CDRHGPEKTEIIAFHNSFHGRTLF--------TVSVGGQPKYSDGFGPKPADITHVP------FNDLAAVKAVIDD-HTC 186 (403)
T ss_pred hhcCCCCCCeEEEEcCCcCCchhh--------hHhhcCChhhhhcCCCCCCCcEEeC------CCCHHHHHHHhcC-CeE
Confidence 123467766644 333220 01111100 0 111111 2388999998876 788
Q ss_pred EEEEcCCCCCC--C-----CCHHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-cccEEEecccccc-cCCCC
Q 009673 254 LIIAGASAYPR--D-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSL-RGPRG 321 (529)
Q Consensus 254 lIi~~~s~~p~--~-----~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~aDiv~~S~hK~l-~Gprg 321 (529)
+|+++ |.+|. . ..+++|+++|++||+++|+|++|. |+...+.. .+. . ..|+ .|++|++ +|+|.
T Consensus 187 aiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~-~~~~~~~~~pdi--~s~sK~l~~G~ri 261 (403)
T PRK05093 187 AVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-GMGRTGDL-FAYMHYGVTPDI--LTSAKALGGGFPI 261 (403)
T ss_pred EEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccc-hhhhhcCCCCCE--EEecccccCCcce
Confidence 99888 33332 2 238999999999999999999965 65443321 111 1 2455 4677998 67889
Q ss_pred eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCc--EEe-
Q 009673 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY--KLV- 398 (529)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~--~v~- 398 (529)
|++++++ ++.+.+.........+++...+.++ ..+|+.+.. .++.+++.++.+.+.+.|++.+. .++
T Consensus 262 g~vv~~~------~i~~~l~~~~~~~t~~~~~~~~~aa-~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 331 (403)
T PRK05093 262 GAMLTTA------EIASHFKVGTHGSTYGGNPLACAVA-EAVFDIINT---PEVLEGVKARRQRFVDGLQKINQKYGVFS 331 (403)
T ss_pred EEEEEcH------HHHhhcCCCCCCCCCCCCHHHHHHH-HHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 9999988 6777765433333344444444443 345665533 24567788888999999987532 121
Q ss_pred -cCCCCCceEEEccCCCC-CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 399 -SGGSDNHLVLVDLRPMG-IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 399 -~~gt~~~~~~v~~~~~~-i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
.++ ...++++.+.+.. .+..++...|.+.||.+. |+ +.+.+||+.+.. +++++++++.+.|.++
T Consensus 332 ~~~~-~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~----~~-----g~~~lRl~~~~~----~~~~~i~~~~~~l~~~ 397 (403)
T PRK05093 332 EIRG-MGLLIGAELKPQYKGRARDFLNAAAEEGVMVL----VA-----GPDVLRFAPSLV----IEEADIDEGLARFEKA 397 (403)
T ss_pred eEee-CceEEEEEecCcchhHHHHHHHHHHHCCeEEe----cC-----CCCEEEEeCCCC----CCHHHHHHHHHHHHHH
Confidence 111 1344555553321 124556677777899984 21 246899976543 4589999999999988
Q ss_pred HHH
Q 009673 477 VEI 479 (529)
Q Consensus 477 ~~~ 479 (529)
+..
T Consensus 398 l~~ 400 (403)
T PRK05093 398 VAK 400 (403)
T ss_pred HHH
Confidence 753
No 279
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.67 E-value=5.6e-14 Score=148.09 Aligned_cols=310 Identities=14% Similarity=0.097 Sum_probs=183.4
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---- 189 (529)
..|+|.+|+...+. ++..+.+ .+ ..+...+++ +++++++|.+. .+..+||++||..++..+.
T Consensus 54 ~~p~v~~a~~~~~~-~~~~~~~---~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~ai~~a~~~~~ 119 (401)
T TIGR01885 54 CHPKIVKALTEQAQ-KLTLSSR---AF-YNDVFGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETAIKLARKWGY 119 (401)
T ss_pred CCHHHHHHHHHHHH-hcccccc---cc-CCHHHHHHH----HHHHhhcCCCE-----EEEeCccHHHHHHHHHHHHHHhh
Confidence 47999999987764 2332221 11 233334444 67778888542 3557999999999888642
Q ss_pred -----CC-CCEEEEcCCCCCccccccccccccccccccce-----E-----EEEEcccCCCCCCCCHHHHHHHhhhc--C
Q 009673 190 -----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILF--R 251 (529)
Q Consensus 190 -----~p-GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-----~-----~~v~~~v~~~~~~iD~d~le~~i~~~--~ 251 (529)
.+ .++|+.....|.|... + .+...+.. + ..+.++ ..|+++|+++++.. +
T Consensus 120 ~~~~~~~~~~~i~~~~~~yhg~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~ 186 (401)
T TIGR01885 120 KVKGIPENQAIIVSAKGNFHGRTL-G------AISMSTDPDSRTNFGPYVPGFKKIP------YNNLEALEEALEDHGPN 186 (401)
T ss_pred hhcCCCCCCCEEEEECCCcCcccH-H------HHhCcCCcccccccCCCCCCceEeC------CCCHHHHHHHHHhcCCC
Confidence 23 3567766655433210 0 11111100 0 111111 23789999988643 3
Q ss_pred CcEEEEcCCCC--CCCCC----HHHHHHHHHHhCCEEEEecccccccccccccC-CC-CC-cccEEEecccccccC--CC
Q 009673 252 PKLIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DP-FK-YCDVVTTTTHKSLRG--PR 320 (529)
Q Consensus 252 pklIi~~~s~~--p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~-~~-~~-~aDiv~~S~hK~l~G--pr 320 (529)
..+|++....+ +...+ +++|+++|++||+++|+|++| .|+...+... .. .. ..|++++ +|.++| ++
T Consensus 187 ~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~-~g~g~~G~~~~~~~~~~~~di~~~--gK~l~~g~~~ 263 (401)
T TIGR01885 187 VCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQ-TGLGRTGKLLCVDHENVKPDIVLL--GKALSGGVYP 263 (401)
T ss_pred EEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCccchhhHHhhcCCCCCEEEe--eccccCCCCC
Confidence 34666653322 22333 899999999999999999997 5653333211 00 11 3577765 499854 67
Q ss_pred CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec-
Q 009673 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS- 399 (529)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~- 399 (529)
.|++++++ ++.+.+.......+.+++.. ..++...+|+.+..++ ..++..++.+++.+.|++.+..++.
T Consensus 264 ig~v~~~~------~i~~~~~~~~~~~t~~~~p~-~~~aa~a~L~~i~~~~---l~~~~~~~~~~~~~~L~~l~~~~~~~ 333 (401)
T TIGR01885 264 VSAVLADD------DVMLTIKPGEHGSTYGGNPL-ACAVAVAALEVLEEEK---LAENAEKLGEIFRDQLKKLPKPIITE 333 (401)
T ss_pred cEEEEEcH------HHHhhccCCCCCCCCCCCHH-HHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhccCCceeE
Confidence 78898887 67776654333333444333 3334444677664333 3456666788899999886544432
Q ss_pred -CCCCCceEEEccCCC--CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 400 -GGSDNHLVLVDLRPM--GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 400 -~gt~~~~~~v~~~~~--~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
.+ ...+..+.+... +.+..++.+.|.++||.+.+ . .+..+||+++. .++++|++++++.|.++
T Consensus 334 ~~g-~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~----~-----~~~~lRi~p~l----~~t~~~i~~~l~~l~~~ 399 (401)
T TIGR01885 334 VRG-RGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKP----T-----HGNIIRLAPPL----VITEEQLDEGLEIIKKV 399 (401)
T ss_pred Eee-cCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEe----c-----CCCEEEEeCCc----cCCHHHHHHHHHHHHHH
Confidence 12 223333333221 12456778888889999843 1 25689998763 36799999999999876
Q ss_pred H
Q 009673 477 V 477 (529)
Q Consensus 477 ~ 477 (529)
+
T Consensus 400 l 400 (401)
T TIGR01885 400 I 400 (401)
T ss_pred h
Confidence 5
No 280
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.66 E-value=4.5e-14 Score=148.53 Aligned_cols=310 Identities=16% Similarity=0.128 Sum_probs=183.4
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---- 189 (529)
-.|+|.+|+...+.+-+..+. . + .++...+++ ++++++++.+. ....+||++||..++....
T Consensus 52 ~~p~v~~a~~~~~~~~~~~~~---~-~-~~~~~~~la----~~L~~~~~~~~-----~~f~~SGseA~e~Alk~ar~~~~ 117 (397)
T TIGR03246 52 AHPELVKALIEQADKLWHIGN---G-Y-TNEPVLRLA----KKLVDATFADK-----VFFCNSGAEANEAALKLARRYAL 117 (397)
T ss_pred CCHHHHHHHHHHHHhcccccC---c-c-CCHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 478999999887754221111 1 1 123333333 67777776542 2456899999999888651
Q ss_pred ---CC-CCEEEEcCCC-CCccccccccccccccccccce-----E-----EEEEcccCCCCCCCCHHHHHHHhhhcCCcE
Q 009673 190 ---KP-HDRIMGLDLP-HGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILFRPKL 254 (529)
Q Consensus 190 ---~p-GD~Vl~~~~~-~~g~~s~g~~~~~~~i~~~g~~-----~-----~~v~~~v~~~~~~iD~d~le~~i~~~~pkl 254 (529)
++ .++|+..+-. ||.+.. .+...+.. + .+..++ ..|++++++.+.+ ++++
T Consensus 118 ~~~~~~r~~ii~~~~~yHG~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~aa 182 (397)
T TIGR03246 118 DKHGADKSEIVAFKNSFHGRTLF--------TVSVGGQPKYSQGFAPLPGGIKHAP------YNDLAAAKALISD-KTCA 182 (397)
T ss_pred hcCCCCCCEEEEECCCcCCccHH--------HHHhcCCcccccCCCCCCCceEEeC------CCCHHHHHHHhcc-CeEE
Confidence 12 3567766643 333210 11111110 0 111111 2488999999976 7888
Q ss_pred EEEcCCCCC-C-----CCCHHHHHHHHHHhCCEEEEecccccccccccccCC--CCC-cccEEEecccccc-cCCCCeEE
Q 009673 255 IIAGASAYP-R-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGGMI 324 (529)
Q Consensus 255 Ii~~~s~~p-~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~-~aDiv~~S~hK~l-~GprgG~i 324 (529)
|++...+.. + ...+++|+++|++||+++|+|++| .|+...|.... .+. ..|++ +++|.+ +|.+.|++
T Consensus 183 vi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~Gr~G~~~a~~~~gv~pDi~--t~~K~lggG~pigav 259 (397)
T TIGR03246 183 VIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDIL--TSAKALGGGFPIGAM 259 (397)
T ss_pred EEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcCCccccchhhhhcCCCCCEE--EeehhhhCCcceeEE
Confidence 888743322 1 234899999999999999999997 66632222110 111 35776 467998 67788999
Q ss_pred EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC--cEEec--C
Q 009673 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLVS--G 400 (529)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G--~~v~~--~ 400 (529)
++++ ++.+.+.......+.++... ..++..++++.+.. .+..+++.++.+++.+.|++.+ +.++. .
T Consensus 260 ~~~~------~i~~~~~~~~~~~t~~~~p~-~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vr 329 (397)
T TIGR03246 260 LTTT------EIAAHLKVGTHGTTYGGNPL-ACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVFSEIR 329 (397)
T ss_pred EEcH------HHHHhccCCCcCCCCCCCHH-HHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEeee
Confidence 9987 67776654322223333333 34443446665533 3456778888888999887743 22222 1
Q ss_pred CCCCceEEEccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 401 GSDNHLVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 401 gt~~~~~~v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
+ ...++.+.+... ......+.+.|.++||.+... +++.+|+..+.. ++++|++++++.|.+++..
T Consensus 330 g-~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------g~~~lR~~p~~~----~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 330 G-KGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIA---------GPNVVRFAPSLV----ISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred c-CceEEEEEEcCchhhHHHHHHHHHHHCCeEEeec---------CCCEEEEeCCCC----CCHHHHHHHHHHHHHHHHH
Confidence 1 122223333211 112456777788899998421 246899975532 5699999999999988763
No 281
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.66 E-value=9.7e-15 Score=137.35 Aligned_cols=279 Identities=17% Similarity=0.169 Sum_probs=182.9
Q ss_pred cCCCCCCCceeeecCChH-HHHHHHHHhhcCCC-CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCC
Q 009673 161 FNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238 (529)
Q Consensus 161 ~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~i 238 (529)
-++.++ |+.+..|+ +.+.+++.+.+.|| ++|+...|+++.+. ...+ ..+ .+++.+++++ ++.+
T Consensus 82 kpLt~d----nic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~------v~A~--iNd--~eVvkvpl~p-dF~l 146 (375)
T KOG0633|consen 82 KPLTSD----NICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYV------VDAA--IND--AEVVKVPLNP-DFSL 146 (375)
T ss_pred CCCCcc----ceEEecCcHHHHHHHHhheecCCccceeecCCcceeEE------EEee--cCC--ceEEEecCCC-Cccc
Confidence 455664 67778999 88889999999999 89999888765321 1112 233 3777888875 6999
Q ss_pred CHHHHHHHhhhc-CCcEEEEcCCCCCC--CCCHHHHHHHHHH-hCCEEEEecccccccccccccCCCC--Cccc-EEEec
Q 009673 239 DYDMLEKTAILF-RPKLIIAGASAYPR--DFDYPRMRQIADA-VGALLMMDMAHISGLVAASVVADPF--KYCD-VVTTT 311 (529)
Q Consensus 239 D~d~le~~i~~~-~pklIi~~~s~~p~--~~d~~~i~~ia~~-~g~~livD~ah~~Gli~~~~~~~~~--~~aD-iv~~S 311 (529)
|.|++.+.++.. ++|++++++|+||+ .+-.+.|.+|.+- -|.++++|+|+ ..+...+ ...++ .|.. ++..+
T Consensus 147 nvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAY-idFsg~~-S~~~lV~kYpNLivlqT 224 (375)
T KOG0633|consen 147 NVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAY-IDFSGVE-SRMKLVKKYPNLIVLQT 224 (375)
T ss_pred cHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeee-Eeecccc-ccchHhHhCCceeehhh
Confidence 999999988764 78999999999998 4555566666543 27899999994 3332211 11111 2445 66789
Q ss_pred ccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 009673 312 THKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 389 (529)
Q Consensus 312 ~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~ 389 (529)
++|++ +|.|.|+-+++. .+.+.++....|+..+.+. ..+|++ |+..-.....+.++..+.+.+.+|...
T Consensus 225 lSKsfGLAGiRvG~~~~~~------~ia~iln~~KaPYNiS~~~--s~~AL~-Als~~n~kkme~~rdaiv~er~RL~ke 295 (375)
T KOG0633|consen 225 LSKSFGLAGIRVGYGAFPL------SIAEILNRAKAPYNISVAG--SVAALA-ALSDSNGKKMEDVRDAIVRERERLFKE 295 (375)
T ss_pred hhhhcCcceeEeecccccH------HHHHHHHhccCCccccchh--HHHHHH-hcCcccchHHHHHHHHHHHHHHHHHHH
Confidence 99985 788999999988 6888787777776543321 233333 232111123467788888889999999
Q ss_pred HHh-cCcEEecCCCCCceEEEccCCC--CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHH
Q 009673 390 LVE-LGYKLVSGGSDNHLVLVDLRPM--GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEF 466 (529)
Q Consensus 390 L~~-~G~~v~~~gt~~~~~~v~~~~~--~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~ 466 (529)
|.+ .++.-+.+|.+++++++.+... +.+.....+.+...||.|+.. |. .+...|++||+.. ++|+-
T Consensus 296 Lt~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfr---gs-e~~c~G~lRitvG-------t~Een 364 (375)
T KOG0633|consen 296 LTEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFR---GS-EEGCKGYLRITVG-------TPEEN 364 (375)
T ss_pred hhcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEc---CC-ccccceeEEEEcC-------Ccccc
Confidence 988 3444345667888888776421 111122344456799999743 22 1235788999642 24666
Q ss_pred HHHHHHHHHH
Q 009673 467 VAIADFIHEG 476 (529)
Q Consensus 467 ~~la~~i~~~ 476 (529)
..+.+.+++.
T Consensus 365 tvL~k~~K~~ 374 (375)
T KOG0633|consen 365 TVLMKCLKQF 374 (375)
T ss_pred hHHHHHHHhh
Confidence 6676666543
No 282
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.66 E-value=3.7e-14 Score=145.25 Aligned_cols=335 Identities=14% Similarity=0.091 Sum_probs=210.1
Q ss_pred cceeEecCCCCCcHHHHHHHhhhhhccCCCCCC-CCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 009673 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (529)
Q Consensus 103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p-~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~ 181 (529)
+..+++|++..+|++|++++...+.+....|.. -.....+.++.+.++ .+.+.++++|+++.+ +.+.+...+||.++
T Consensus 4 ~~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~-~~~~~Lr~Ll~~P~~-y~Vlfl~GggT~~~ 81 (364)
T PRK12462 4 NQLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLA-QAEADLRDLLGIPDE-YGVVFLQGGSSLQF 81 (364)
T ss_pred ccceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHH-HHHHHHHHHhCCCCC-CeEEEEeccHHHHH
Confidence 457889999999999999999888764433321 111222345555554 567999999999543 33556666778999
Q ss_pred HHHHHhhcCCCCEEE-EcCCCCCccccccccccccccccccceEEEEEcccC-CCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 182 FEVYTAILKPHDRIM-GLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 182 ~~~l~all~pGD~Vl-~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
.++.+.|+++||+++ +.. .|+++..+.. .....| .++++...-. ..+..++++++ .+.+ +.+.|.++.
T Consensus 82 ea~~~Nll~~g~~~~~~~~---tG~fg~r~~~---ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~-d~~~v~~t~ 151 (364)
T PRK12462 82 SMIPMNFSRPGAAAPEYVT---TGYWSRKAIG---EASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDA-RAPFRHYVS 151 (364)
T ss_pred HHHHHHcCCCCCcEEEEEe---CCHHHHHHHH---HHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCC-CCcEEEEcc
Confidence 999999999999765 443 3444433211 111223 1233221000 01235666665 1222 467777664
Q ss_pred CCCC--CCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHH
Q 009673 260 SAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (529)
Q Consensus 260 s~~p--~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l 336 (529)
.... ...+ ++.+.+++++++|++...+.. +..++..|++.++.+|+|+ |.| ++++.+++ .
T Consensus 152 NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~-----pid~~~~dvi~agsQKnlg-P~Gltvvivs~~------a 214 (364)
T PRK12462 152 NETVEGLQFP-----DAAGLPDSPLIADMSSDFMSR-----PFDVEAYGMVYAHAQKNLG-PAGVTVAIIRRA------L 214 (364)
T ss_pred CCCCceEecC-----cccccCCCeEEEEcCchhhCC-----CCChHHccEEEeeccccCC-CCceEEEEECHH------H
Confidence 4333 3343 233346899999997444322 2233345999999999995 888 88888884 3
Q ss_pred Hhhhcccc-----------cCCCCCCChHHHHHHHHHHHHHhcCc--hHHHHHHHHHHHHHHHHHHHHhc-CcEEec--C
Q 009673 337 ESAINNAV-----------FPGLQGGPHNHTIGGLAVCLKHAQSP--EFKVYQNKVVSNCRALASRLVEL-GYKLVS--G 400 (529)
Q Consensus 337 ~~~i~~~~-----------~p~~~g~p~~~~iaala~al~~~~~~--~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~--~ 400 (529)
.++..... .....-||....+.++..+|+.+..+ +.+.+.++..+.++.+++.+.+. |+.... +
T Consensus 215 l~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~ 294 (364)
T PRK12462 215 LERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHR 294 (364)
T ss_pred HhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCh
Confidence 33322110 00123488999999999999988776 78999999999999999999885 354332 2
Q ss_pred CCCCceE-EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 401 GSDNHLV-LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 401 gt~~~~~-~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
...+.+. .+.+..... .+++.+..+++|+.- +-|+.+ -+|+|+|+- + .++.++++.|++++++.-+
T Consensus 295 ~~RS~mnv~f~~~~~~l-~~~f~~~a~~~gl~~----lkGhr~---vgg~Ras~y--n--a~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 295 AARSTMNVAFRFRQPRL-DTLFKEQSTEAGFCG----LSGHRS---IGGIRASLY--N--AVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred hhcCcceEEEEcCCHHH-HHHHHHHHHHCCCcc----ccCCcc---cCceEEEcC--C--CCCHHHHHHHHHHHHHHHH
Confidence 2223332 334433222 245667778899986 334432 578999862 2 3678999999999987644
No 283
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.66 E-value=2.5e-15 Score=137.64 Aligned_cols=163 Identities=26% Similarity=0.312 Sum_probs=115.4
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC
Q 009673 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (529)
Q Consensus 153 a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~ 232 (529)
++++++++|+.+.+. +.+ .++|++|+..++.++.++|++|++.++.|.++.. . .....|. +++.++.+
T Consensus 5 ~~~~l~~~~~~~~~~--~~~-~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~--~-----~~~~~g~--~~~~v~~~ 72 (170)
T cd01494 5 LEEKLARLLQPGNDK--AVF-VPSGTGANEAALLALLGPGDEVIVDANGHGSRYW--V-----AAELAGA--KPVPVPVD 72 (170)
T ss_pred HHHHHHHHcCCCCCc--EEE-eCCcHHHHHHHHHHhCCCCCEEEEeecccceehh--h-----HHHhcCC--EEEEeccC
Confidence 347889999644332 333 3477899999999999999999999998877642 1 1233444 56666655
Q ss_pred CCC-CCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEE
Q 009673 233 EST-GLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVT 309 (529)
Q Consensus 233 ~~~-~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~ 309 (529)
..+ ...|.+.+++.....+|++++++.+++++ ..|+++|.++|+++|+++++|++|..+............++|+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~ 152 (170)
T cd01494 73 DAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVT 152 (170)
T ss_pred CCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEE
Confidence 322 22333356555544488999998776665 568899999999999999999998876654322111223689999
Q ss_pred ecccccccCCCCeEEEee
Q 009673 310 TTTHKSLRGPRGGMIFFK 327 (529)
Q Consensus 310 ~S~hK~l~GprgG~i~~~ 327 (529)
.|+||+|.++++|+++++
T Consensus 153 ~s~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 153 FSLHKNLGGEGGGVVIVK 170 (170)
T ss_pred EEcccccCCCceEEEEeC
Confidence 999999988888999874
No 284
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.64 E-value=1.4e-14 Score=152.51 Aligned_cols=290 Identities=19% Similarity=0.242 Sum_probs=192.9
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (529)
Q Consensus 153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v 231 (529)
+++.+++.||++...+ +++|| .||..+++++++|||+||+....|-++. || +-++|+ .++++.-
T Consensus 75 Aqe~aA~~fgAd~tyF-----vvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~-~g-------lilaGa--~Pvyl~p 139 (557)
T COG1982 75 AQELAARVFGADHTYF-----VVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIH-HG-------LILAGA--TPVYLEP 139 (557)
T ss_pred HHHHHHHHhCCCceEE-----EECCccHHHHHHHHhhcCCCCEEEecCCccHHHH-HH-------HHHcCC--ceEEecC
Confidence 4578899999998643 25666 8999999999999999999988775543 22 345565 5554332
Q ss_pred --CCC---CCCCCHHHHHHHhhhcC-C-cEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCC-C
Q 009673 232 --DES---TGLVDYDMLEKTAILFR-P-KLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP-F 302 (529)
Q Consensus 232 --~~~---~~~iD~d~le~~i~~~~-p-klIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~-~ 302 (529)
++. -+.|+.+.+++.+.+++ . |++++..++|-+ ..+.++|.+.++..++|+.+|.+|.......+..+.+ .
T Consensus 140 ~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~ 219 (557)
T COG1982 140 SRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESAL 219 (557)
T ss_pred CCCccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhh
Confidence 221 15789999988776632 3 677777777655 7899999999999999999999987655444433332 2
Q ss_pred -CcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH----H
Q 009673 303 -KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY----Q 376 (529)
Q Consensus 303 -~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~----~ 376 (529)
.++|+++-|+||.+++..- .+|..++... --.++++.+..-...++|.+..+|++.+|-.+....+ ++. .
T Consensus 220 ~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~---~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G-~~l~~~~~ 295 (557)
T COG1982 220 NGGADFVTQSTHKLLAALSQASMIHVKDGRA---VNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAG-RELWQEVI 295 (557)
T ss_pred hcCceEEEechhhhhhhhhhhHHHhhCCCcc---CCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhh-HHHHHHHH
Confidence 2789999999999977655 7888775200 1234555544444467889999999987544433222 333 4
Q ss_pred HHHHHHHHHHHHHHHh-cCcEEecCCC--------------------CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCC
Q 009673 377 NKVVSNCRALASRLVE-LGYKLVSGGS--------------------DNHLVLVDLRPMGIDGARVEKILDMASITLNKN 435 (529)
Q Consensus 377 ~~i~~~a~~l~~~L~~-~G~~v~~~gt--------------------~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~ 435 (529)
....+.++.+.+...+ .+++++.++. |.--+.+..+..|+++..+.++|++.||...+.
T Consensus 296 ~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e~gii~e~~ 375 (557)
T COG1982 296 DEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLREHGIIPEET 375 (557)
T ss_pred HHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHHHcCCeeeec
Confidence 5555666666666665 3577665431 111123344467899999999999999988653
Q ss_pred CCCCCCCCCCCCe--EEEccCCCccCCCCHHHHHHHHHHHH
Q 009673 436 SVPGDKSALVPGG--IRIGSPAMTTRGFSEKEFVAIADFIH 474 (529)
Q Consensus 436 ~~Pg~~~~~~~~~--iRig~~~~tt~g~~~~d~~~la~~i~ 474 (529)
. ... +=++ +.. |-...++++++++..
T Consensus 376 ~---------d~~~lll~~-~~~---gk~~~lv~~L~~f~r 403 (557)
T COG1982 376 G---------DYSNLLLFS-PGI---GKWQTLVDRLLEFKR 403 (557)
T ss_pred C---------CceeeEEee-ecc---chHHHHHHHHHHHHH
Confidence 1 111 1122 111 445678888888877
No 285
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.64 E-value=5.4e-14 Score=146.09 Aligned_cols=244 Identities=19% Similarity=0.167 Sum_probs=157.9
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCC----ceeeecCChHHHHHHHHHhhcC--------C-----CCEEEEcCCCCCc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAILK--------P-----HDRIMGLDLPHGG 204 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~----~~~V~~~sGs~A~~~~l~all~--------p-----GD~Vl~~~~~~~g 204 (529)
..+...++|..+.+|+++++|.+.+.. +.-+..++||++|+.++.+..+ . ++.+++.+- .+
T Consensus 73 ~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~--~a 150 (373)
T PF00282_consen 73 ASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSE--QA 150 (373)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEET--TS
T ss_pred cccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccc--cc
Confidence 346678999999999999999993211 1345556777999887765421 1 233444332 23
Q ss_pred cccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--C---CcEEEEc--CCCCCCCCCHHHHHHHHHH
Q 009673 205 HLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--R---PKLIIAG--ASAYPRDFDYPRMRQIADA 277 (529)
Q Consensus 205 ~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~---pklIi~~--~s~~p~~~d~~~i~~ia~~ 277 (529)
|++. .+...+.|.. ++.++++ +++.+|+++|++++.+. + |-+|+.+ .+..+...|+++|++||++
T Consensus 151 H~S~-----~Kaa~~lGlg--~~~I~~~-~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~ 222 (373)
T PF00282_consen 151 HYSI-----EKAARILGLG--VRKIPTD-EDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEK 222 (373)
T ss_dssp -THH-----HHHHHHTTSE--EEEE-BB-TTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHH
T ss_pred ccHH-----HHhcceeeeE--EEEecCC-cchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccc
Confidence 4332 2456777875 5566676 47899999999988653 2 3244443 3444458899999999999
Q ss_pred hCCEEEEeccccccccccc-ccC--CCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh-------c-----
Q 009673 278 VGALLMMDMAHISGLVAAS-VVA--DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI-------N----- 341 (529)
Q Consensus 278 ~g~~livD~ah~~Gli~~~-~~~--~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i-------~----- 341 (529)
+|+|+++|+|+........ ..+ ..++.+|-++.++|||+..|-+ |+++++++. .+.... .
T Consensus 223 ~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~----~l~~~~~~~~~Yl~~~~~~ 298 (373)
T PF00282_consen 223 YNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKS----DLRDAFSINADYLGNDDRE 298 (373)
T ss_dssp CT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGG----GHHGGGEEEETCTT-S-SS
T ss_pred cceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeeccc----chHHHhccChhhhcccccc
Confidence 9999999998543222212 111 2234799999999999988877 999988851 122211 1
Q ss_pred -----ccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecC
Q 009673 342 -----NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSG 400 (529)
Q Consensus 342 -----~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~ 400 (529)
......++++. -...+.++..++....++|.++.++..+++++|.+.|++ .+++++.+
T Consensus 299 ~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~ 362 (373)
T PF00282_consen 299 SDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNE 362 (373)
T ss_dssp S-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESST
T ss_pred cccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 00012235554 334455666788777788999999999999999999998 46888764
No 286
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.63 E-value=1.7e-14 Score=145.32 Aligned_cols=319 Identities=19% Similarity=0.194 Sum_probs=202.5
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCC
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP 191 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~p 191 (529)
+..+.+.+++. +|.....++|...|+ +.+.++| +..++++|.+.+ +...-|-..|...+.+|+.|
T Consensus 155 ~ca~~~~~~~~-----kygl~~css~~e~G~~~~hkelE----~l~A~f~g~e~a-----~vF~mGf~TNs~~~p~l~~~ 220 (519)
T KOG1357|consen 155 PCAEASLKSFD-----KYGLSRCSSRHEAGTTEEHKELE----ELVARFLGVEDA-----IVFSMGFATNSMNIPSLLGK 220 (519)
T ss_pred cCChHHHHHHH-----HhcccccccchhcccHHHHHHHH----HHHHHhcCCcce-----EEEeccccccccCcceeecC
Confidence 44677777775 344444455554444 4456777 667889999974 33467778888889999999
Q ss_pred CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---------cCC--cEEEEc--
Q 009673 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---------FRP--KLIIAG-- 258 (529)
Q Consensus 192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---------~~p--klIi~~-- 258 (529)
|-.|+...+.|.+... .++.+|+ .+.-+.. -|.++||+.+++ ++| |++++.
T Consensus 221 gsLIiSDelNHaSi~~--------GaRLSgA--tiRVfkH------Ndm~~LEr~Lrd~I~~gqP~Thrp~kki~iiveg 284 (519)
T KOG1357|consen 221 GSLIISDELNHASLIT--------GARLSGA--TTRVFRH------NDMQGLERLLRDAIVYGQPKTHRPWKKILICVEG 284 (519)
T ss_pred Ccceeeccccchheec--------cccccCc--eEEEEec------CCHHHHHHHHHHHHhcCCCCcCCcchheeeeecc
Confidence 9999999988866543 3456776 3333332 245566655543 123 455554
Q ss_pred -CCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccc-cc----cCCC-CCcccEEEecccccccCCCCeEEEeeCCCc
Q 009673 259 -ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV----VADP-FKYCDVVTTTTHKSLRGPRGGMIFFKKDPV 331 (529)
Q Consensus 259 -~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~~----~~~~-~~~aDiv~~S~hK~l~GprgG~i~~~~~~~ 331 (529)
++.-+.+.++.++.++++++.++|+.|+||+.|.... |. +..+ ...+||+.+++.|++ |--||+|.+++
T Consensus 285 iysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSf-ga~GGyiagsk--- 360 (519)
T KOG1357|consen 285 IYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSF-GAAGGYIAGSK--- 360 (519)
T ss_pred ceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhc-ccccceecCcH---
Confidence 4555668899999999999999999999999998743 21 1111 125789999999997 56789999998
Q ss_pred chhHHHhhhcccccCCCCCCChHHHHHH-HHHHHHHhcC----chHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673 332 LGVELESAINNAVFPGLQGGPHNHTIGG-LAVCLKHAQS----PEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 406 (529)
Q Consensus 332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaa-la~al~~~~~----~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~ 406 (529)
++.+.++...-....++....-+++ ...+++.+.. ...++..+++.+|+++++..|.+.||-+... .|+..
T Consensus 361 ---~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~-~dSpV 436 (519)
T KOG1357|consen 361 ---ELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVYGN-NDSPV 436 (519)
T ss_pred ---HHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEecC-CCCCc
Confidence 6777665432111222211111111 1234554442 2347888999999999999999999987754 34543
Q ss_pred EEEc-cCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 407 VLVD-LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 407 ~~v~-~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
+.+- ..+.. - .++.+.|.+.+|.+-....|. .|+..+.+|+...+- ++.|+++++.+.+.++=
T Consensus 437 vplll~~~~k-~-~~f~r~~l~~nigvVvvgfPa--tpl~e~r~R~c~Sa~----ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 437 VPLLLYGPAK-I-VAFSREMLERNIGVVVVGFPA--TPLLESRARFCLSAS----HTKEDLDRALEVIDRVG 500 (519)
T ss_pred ceeeecCccc-c-cHHHHHHHhcCceEEEEeCCC--chHHHhHHHhhhccc----ccHHHHHHHHHHHhhhc
Confidence 3221 22221 2 344545555555443332342 355678889876654 45788888888877654
No 287
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.63 E-value=1.3e-13 Score=156.36 Aligned_cols=309 Identities=14% Similarity=0.113 Sum_probs=189.9
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh-
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGG--NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI- 188 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g--~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~al- 188 (529)
++|+.|++++.+... .|+. |.+ |..- ....+.+. ..+..+++++|++.+ |+..+.++ .+..++++++
T Consensus 116 ~~P~~v~~~i~~~~~-~~Ta-ytP--YqaEisQG~lqal~-~~Qt~ia~LtG~~~a----naSL~d~aTAaaea~~~a~~ 186 (993)
T PLN02414 116 HVPPVILRNILENPG-WYTQ-YTP--YQAEIAQGRLESLL-NYQTMITDLTGLPMS----NASLLDEGTAAAEAMAMCNN 186 (993)
T ss_pred cCCHHHHHHHHhChH-HHhh-cCC--CchHHHHHHHHHHH-HHHHHHHHHhCCChh----hEeecCChHHHHHHHHHHHh
Confidence 478888788875542 1211 111 1110 01122333 356889999999985 44445544 5566666666
Q ss_pred cCCC--CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC-CC
Q 009673 189 LKPH--DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP-RD 265 (529)
Q Consensus 189 l~pG--D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p-~~ 265 (529)
+++| |+|++.+..|+.+..... ......|. +++.++++. .| ...+ ..-.+++.+|++. ..
T Consensus 187 ~~~g~~~~VlVs~~~hP~~~~v~~----t~a~~~Gi--eV~~v~~~~----~~------~~~~-~v~~vlvq~P~~~G~v 249 (993)
T PLN02414 187 ILKGKKKKFLIASNCHPQTIDVCQ----TRADGLGL--EVVVADEKD----FD------YSSG-DVCGVLVQYPATDGEV 249 (993)
T ss_pred cccCCCCEEEEcCccCHhHHHHHH----HhhhhcCC--EEEEecchh----hc------cccC-ceEEEEEecCCCCeEE
Confidence 5555 789999988876543211 01122343 555554431 11 1111 2223445555544 47
Q ss_pred CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccc-----cCCCCeEEEeeCCCcchhHHHhh
Q 009673 266 FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL-----RGPRGGMIFFKKDPVLGVELESA 339 (529)
Q Consensus 266 ~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l-----~GprgG~i~~~~~~~~~~~l~~~ 339 (529)
.|+++|+++|+++|+++++ +++..++.... .|-+ ++||++++.|||+ +||+.|+++++++ +...
T Consensus 250 ~dv~~I~~~ah~~GaL~iV-aad~lal~~l~---~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~------~~r~ 319 (993)
T PLN02414 250 LDYAEFVKNAHANGVKVVM-ATDLLALTMLK---PPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQE------YKRL 319 (993)
T ss_pred cCHHHHHHHHHHcCCEEEE-EECHHHhcCCC---CHhhccCcEEEECCCccccCCCCCCCCeeEEEECHH------HHhh
Confidence 8999999999999999999 77766655321 1222 8999999999997 7787899999884 3222
Q ss_pred hc---------ccccCC--------------CCCCChHHHHHHHHHHH-----HHhcCchHHHHHHHHHHHHHHHHHHHH
Q 009673 340 IN---------NAVFPG--------------LQGGPHNHTIGGLAVCL-----KHAQSPEFKVYQNKVVSNCRALASRLV 391 (529)
Q Consensus 340 i~---------~~~~p~--------------~~g~p~~~~iaala~al-----~~~~~~~~~~~~~~i~~~a~~l~~~L~ 391 (529)
+- ....++ -.++.+.....++.+++ ..+...+.++..+++..++.++++.|.
T Consensus 320 ~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~ 399 (993)
T PLN02414 320 MPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLK 399 (993)
T ss_pred CCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHh
Confidence 11 000000 13454553333332222 233446678888999999999999998
Q ss_pred hcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673 392 ELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 471 (529)
Q Consensus 392 ~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~ 471 (529)
+.|+++..+ .....+.+.+. +..++.+.|.++||.++.. ..+.+|++++..+| ++|++.+++
T Consensus 400 ~~G~~~~~~-~~f~~vt~~~~----~~~~v~~~L~~~gI~l~~~---------~~~~lrvs~~e~~T----~edId~L~~ 461 (993)
T PLN02414 400 KLGFQVQSL-PFFDTVKVKCS----DADAIADAAAKVGINLRVV---------DANTVTVSFDETTT----LEDVDKLFK 461 (993)
T ss_pred hcCCccCCC-CCcCeEEEecC----CHHHHHHHHHHCCCeeEEe---------cCCeEEEEeeccCC----HHHHHHHHH
Confidence 899888654 12223444442 3477888999999987542 13569999988776 799999999
Q ss_pred HHHH
Q 009673 472 FIHE 475 (529)
Q Consensus 472 ~i~~ 475 (529)
.|..
T Consensus 462 ~l~~ 465 (993)
T PLN02414 462 VFAG 465 (993)
T ss_pred HHcc
Confidence 9964
No 288
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.61 E-value=1.8e-13 Score=144.44 Aligned_cols=317 Identities=18% Similarity=0.129 Sum_probs=186.3
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---- 189 (529)
-.|.|.+|+...+..-+.. +..+. ++...++ .++++++++.+. ....+||++|+..++....
T Consensus 56 ~~p~v~~A~~~~~~~~~~~---~~~~~--~~~~~~l----a~~l~~~~~~~~-----v~~~~sGseA~e~Alk~ar~~~~ 121 (406)
T PRK12381 56 AHPALREALNEQASKFWHT---GNGYT--NEPVLRL----AKKLIDATFADR-----VFFCNSGAEANEAALKLARKYAH 121 (406)
T ss_pred CCHHHHHHHHHHHhhcccc---cCccC--CHHHHHH----HHHHHhhCCCCe-----EEEcCCcHHHHHHHHHHHHHHHh
Confidence 4788999888777532111 11111 2222222 367777776542 3556899999999887641
Q ss_pred ----CCCCEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCC---CCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673 190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES---TGLVDYDMLEKTAILFRPKLIIAGASA 261 (529)
Q Consensus 190 ----~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~---~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (529)
.+..+|+..+..|-|... + .+...+.. +..-.-++.+. -...|++++++.+++ ++++|++. |.
T Consensus 122 ~~~~~~r~~ii~~~~~yHG~t~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aaviiE-Pv 192 (406)
T PRK12381 122 DRYGSHKSGIVAFKNAFHGRTL-F------TVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDD-QTCAVIVE-PI 192 (406)
T ss_pred hcCCCCCCeEEEECCCcCCcch-h------HHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccC-CeeEEEEe-CC
Confidence 245688888765433211 1 11112210 00000000000 123588999999976 78888886 44
Q ss_pred CCC-------CCCHHHHHHHHHHhCCEEEEecccccccccccccCC--CCC-cccEEEecccccc-cCCCCeEEEeeCCC
Q 009673 262 YPR-------DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDP 330 (529)
Q Consensus 262 ~p~-------~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~-~aDiv~~S~hK~l-~GprgG~i~~~~~~ 330 (529)
++. ...+++|+++|++||+++|+|++| .|+...+.... .+. ..|++ |++|.+ +|++.|++++++
T Consensus 193 ~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~-tG~gr~G~~~~~~~~~v~pDi~--t~sK~l~gG~~ig~~~~~~-- 267 (406)
T PRK12381 193 QGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDVL--TTAKALGGGFPIGAMLTTE-- 267 (406)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh-hCCCCCcchhhhHhhCCCCCEE--EehhhhhCCCceEEEEEcH--
Confidence 432 235889999999999999999997 56533332110 011 24664 677998 677889999987
Q ss_pred cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC--cEEecCC-CCCceE
Q 009673 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLVSGG-SDNHLV 407 (529)
Q Consensus 331 ~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G--~~v~~~g-t~~~~~ 407 (529)
++.+.+.........+++... .++...+++.+.. .+..+++.++.+++.+.|++.+ +.++... ....++
T Consensus 268 ----~~~~~~~~~~~~~t~~~~pl~-~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~ 339 (406)
T PRK12381 268 ----KCASVMTVGTHGTTYGGNPLA-SAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLI 339 (406)
T ss_pred ----HHHhhcCCCCCCCCCCCCHHH-HHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEE
Confidence 677776553333333443333 3333345665533 2456777888888888887743 3222210 112334
Q ss_pred EEccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 408 LVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 408 ~v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
++.+... .-....+.+.|.++||.+.. . .+..|||+.+.. ++++|++++.+.|.+++..
T Consensus 340 ~~~l~~~~~~~~~~~~~~l~~~Gv~v~~----~-----g~~~lRl~p~~~----~t~~~i~~~~~~l~~~l~~ 399 (406)
T PRK12381 340 GCVLNAEYAGKAKQISQEAAKAGVMVLI----A-----GPNVVRFAPALN----ISEEEITTGLDRFARACER 399 (406)
T ss_pred EEEecCchhhHHHHHHHHHHHCCcEEee----C-----CCCEEEEeCCcc----CCHHHHHHHHHHHHHHHHH
Confidence 4444321 01235677888899999842 1 235899986643 4589999999999998864
No 289
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.60 E-value=1.9e-13 Score=136.20 Aligned_cols=323 Identities=18% Similarity=0.208 Sum_probs=201.6
Q ss_pred cceeEecC-------CCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC-----CCCce
Q 009673 103 KSLELIAS-------ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-----NKWGV 170 (529)
Q Consensus 103 ~~i~L~as-------en~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~-----~~~~~ 170 (529)
+.|||..+ ..++-+.|.+|-...+.+..+..| .+-+-.+.+.+. ..+-+||.++ +.+ +
T Consensus 27 ~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Y------l~i~G~~~f~~~---~~~llFG~d~~~l~~~Rv-~ 96 (396)
T COG1448 27 NKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNY------LPIEGLPEFLEA---VQKLLFGADSPALAEDRV-A 96 (396)
T ss_pred CeeeeeeeeeeCCCCCcchhHHHHHHHHHhhcccccccc------CCcCCcHHHHHH---HHHHhcCCCcHHHHhhhH-h
Confidence 56888642 235568888888766655443333 333333444432 2334688552 333 4
Q ss_pred eeecCChHHHHHHHHH--hhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc-CCCCCCCCHHHHHHHh
Q 009673 171 NVQPLSGSPANFEVYT--AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTA 247 (529)
Q Consensus 171 ~V~~~sGs~A~~~~l~--all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v-~~~~~~iD~d~le~~i 247 (529)
.+|..+||.|+..+-. .-..|..+|.+++|+++.|.. -+...++++..|++ |.++..+|++.+.+.+
T Consensus 97 t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~----------If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L 166 (396)
T COG1448 97 TVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKA----------IFEAAGLEVETYPYYDAETKGLDFDGMLADL 166 (396)
T ss_pred heecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHH----------HHHhcCCceeeeeccccccccccHHHHHHHH
Confidence 6899999988876543 335688889999999988742 12333457766665 5567789999988777
Q ss_pred hhcCC-cEEEEc-CCCCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccccC--CCC----C-cc-cEEEecc
Q 009673 248 ILFRP-KLIIAG-ASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPF----K-YC-DVVTTTT 312 (529)
Q Consensus 248 ~~~~p-klIi~~-~s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~----~-~a-Div~~S~ 312 (529)
+.... .+|++. ..+||+ ...|++|.++.++.|.+.+.|.| |-|+-.+ ... ..+ . +. =+|++|+
T Consensus 167 ~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~A-YQGF~~G-leeDa~~lR~~a~~~~~~lva~S~ 244 (396)
T COG1448 167 KTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIA-YQGFADG-LEEDAYALRLFAEVGPELLVASSF 244 (396)
T ss_pred HhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehh-hhhhccc-hHHHHHHHHHHHHhCCcEEEEehh
Confidence 65333 355554 557777 23588999999999999999998 5554322 110 011 0 12 2788999
Q ss_pred cccc--cCCCCeE-EEeeCCCcchhHHHhhh----cccccCCCCCCChHHHHHHHHHHH-----HHhcCchHHHHHHHHH
Q 009673 313 HKSL--RGPRGGM-IFFKKDPVLGVELESAI----NNAVFPGLQGGPHNHTIGGLAVCL-----KHAQSPEFKVYQNKVV 380 (529)
Q Consensus 313 hK~l--~GprgG~-i~~~~~~~~~~~l~~~i----~~~~~p~~~g~p~~~~iaala~al-----~~~~~~~~~~~~~~i~ 380 (529)
+|+| .|-|.|. .++..+. +...++ ... ....+++|..+...-.+..| +..-..+...+++++.
T Consensus 245 SKnfgLYgERVGa~~vva~~~----~~a~~v~sqlk~~-iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~ 319 (396)
T COG1448 245 SKNFGLYGERVGALSVVAEDA----EEADRVLSQLKAI-IRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRIL 319 (396)
T ss_pred hhhhhhhhhccceeEEEeCCH----HHHHHHHHHHHHH-HHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9986 6788754 4443321 222222 221 22334566655544333332 2221234577889999
Q ss_pred HHHHHHHHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCC
Q 009673 381 SNCRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM 456 (529)
Q Consensus 381 ~~a~~l~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~ 456 (529)
+.+..|.+.|++.| |..+.. ...++. . .|.+.+++.++.+++||.+.. +| ||++.
T Consensus 320 ~mR~~lv~~L~~~~~~~~f~~i~~--Q~GMFs--y--~Gls~~QV~rLree~~IY~v~------------sG-Ri~va-- 378 (396)
T COG1448 320 EMRQALVDALKALGAPRNFDFIIS--QRGMFS--Y--TGLSPEQVDRLREEFGIYLVA------------SG-RINVA-- 378 (396)
T ss_pred HHHHHHHHHHHhhCCCcccchHhh--cCceee--c--CCCCHHHHHHHHHhccEEEec------------CC-eeeec--
Confidence 99999999998833 444432 122222 2 267889999999999999832 22 88765
Q ss_pred ccCCCCHHHHHHHHHHHHHH
Q 009673 457 TTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 457 tt~g~~~~d~~~la~~i~~~ 476 (529)
|+++..++++++.|.++
T Consensus 379 ---Gl~~~ni~~va~ai~~v 395 (396)
T COG1448 379 ---GLNTSNIDYVAKAIAAV 395 (396)
T ss_pred ---cCChhhHHHHHHHHHhh
Confidence 46679999999999875
No 290
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.59 E-value=7.8e-13 Score=138.17 Aligned_cols=307 Identities=14% Similarity=0.120 Sum_probs=173.0
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cCCC
Q 009673 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 192 (529)
Q Consensus 115 ~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~pG 192 (529)
.|+|++|+...+...+ +++. .+ ...++ ..+++.+....+. ..+...||++||..++... ...+
T Consensus 46 ~p~v~~a~~~~~~~~~--~~~~-~~------~~~~~----~~la~~l~~~~~~--~~~~~~SGseA~~~Al~~ar~~~~~ 110 (375)
T PRK04260 46 HPQVQQALQKQAGLIW--HSPN-LY------LNSLQ----EEVAQKLIGDKDY--LAFFCNSGAEANEAAIKIARKATGK 110 (375)
T ss_pred CHHHHHHHHHHHHhcC--cccC-cc------CCHHH----HHHHHHHhcCcCC--EEEEcCccHHHHHHHHHHHHHhcCC
Confidence 6789999887764321 1221 11 12233 2333333222221 2245688999999888765 2456
Q ss_pred CEEEEcCCCCCccccccccccccccccccce-----EEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--C
Q 009673 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--D 265 (529)
Q Consensus 193 D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-----~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~ 265 (529)
++|++.+..+-|..... +...+.. +.. .++........|++++++.+.+ ++.+|++...++++ .
T Consensus 111 ~~vv~~~~~yHg~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~dl~~l~~~l~~-~~a~vi~e~v~~~~G~~ 181 (375)
T PRK04260 111 QEIITFQNSFHGRTFGS-------MSATGQDKIKDGFGD-GVPHFSYAIFNDLNSVKALVNK-NTAAVMLELVQGESGVL 181 (375)
T ss_pred CeEEEECCCcCcccHHH-------HhccCCcccCCCCCC-CCCCeEEeCCCCHHHHHHhcCC-CeEEEEECCeECCCCCc
Confidence 78888776543221111 1111110 000 0000000012488999988865 67788877544332 2
Q ss_pred C----CHHHHHHHHHHhCCEEEEecccccccccccccCC--CCC-cccEEEeccccccc-CCCCeEEEeeCCCcchhHHH
Q 009673 266 F----DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELE 337 (529)
Q Consensus 266 ~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~-~aDiv~~S~hK~l~-GprgG~i~~~~~~~~~~~l~ 337 (529)
. .++++.++|+++|+++++|++|. |+...+.... -.. ..|++ |++|.|+ |.+.|++++++ ++.
T Consensus 182 ~~~~~~l~~~~~l~~~~~~~~i~De~~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~------~~~ 252 (375)
T PRK04260 182 PADKDFVKALADYCQETGILLIVDEVQT-GMGRTGKLYAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKS------SLG 252 (375)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhHhhCCCCCEE--EecccccCCcceEEEEEcH------HHH
Confidence 2 28999999999999999999974 6533331111 011 24655 6789995 67889999987 676
Q ss_pred hhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cC-cEEecCCCCCceEEEccC
Q 009673 338 SAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LG-YKLVSGGSDNHLVLVDLR 412 (529)
Q Consensus 338 ~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G-~~v~~~gt~~~~~~v~~~ 412 (529)
+.+.........+++.. ..++....++....+ ++.+++.++.+.+.+.|.+ .+ +..+.+ ...++++.+.
T Consensus 253 ~~~~~~~~~~t~~~~~~-~~~aa~a~l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~g~~~~~~~~ 326 (375)
T PRK04260 253 GAFGYGSHGSTFGGNKL-SMAAASATLDIMLTA---GFLEQALENGNYLQEQLQKALQDKETVTTVRG--LGYMIGIETT 326 (375)
T ss_pred hhcCCCCCCCCCCcCHH-HHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHhhCCCeeEEec--cceEEEEEec
Confidence 66654322223333333 333333456554332 3445555555555555544 32 222222 2345566653
Q ss_pred CCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 413 PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 413 ~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
.+...+.+.|.+.||.+. |. ..+.+|++.+.. ++++|++++++.|+++
T Consensus 327 ---~~~~~~~~~l~~~Gi~v~----~~-----~~~~lR~~~~~~----~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 327 ---ADLSQLVEAARDKGLIVL----TA-----GTNVIRLLPPLT----LTKEEIEQGIAILSEV 374 (375)
T ss_pred ---CcHHHHHHHHHhCCCEEe----cC-----CCCEEEEcCCCc----cCHHHHHHHHHHHHHh
Confidence 245678888889999983 32 247899987543 5689999999998765
No 291
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.59 E-value=5.9e-16 Score=154.84 Aligned_cols=252 Identities=20% Similarity=0.229 Sum_probs=161.9
Q ss_pred CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc
Q 009673 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 189 (529)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all 189 (529)
|+| ..|+++++|.... .|.. .|++.++..++| ++++++||.+.. +.+.+|+.||..++.+++
T Consensus 4 SD~-~~~~m~~a~~~a~-----~gd~---~Yg~D~~~~~l~----~~i~~l~g~e~a-----~f~~sGT~An~~al~~~~ 65 (290)
T PF01212_consen 4 SDT-PTPAMLEAMAAAN-----VGDD---AYGEDPTTARLE----ERIAELFGKEAA-----LFVPSGTMANQLALRAHL 65 (290)
T ss_dssp -SS-S-HHEEHHHHHTT-----SB-C---CTTSSHHHHHHH----HHHHHHHTSSEE-----EEESSHHHHHHHHHHHHH
T ss_pred ccC-CCHHHHHHHHccc-----cCCc---ccCCChhHHHHH----HHHHHHcCCCEE-----EEeCCCChHHHHHHHHHH
Confidence 566 7899999995432 1222 377788888888 778899999863 456899999999999999
Q ss_pred CCCCEEEEcCCCCCcccccccccccccc-ccccceEEEEEcccCCCCCCCCHHHHHHHhhh-----cCCcEEEEcCCCC-
Q 009673 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-----FRPKLIIAGASAY- 262 (529)
Q Consensus 190 ~pGD~Vl~~~~~~~g~~s~g~~~~~~~i-~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~-----~~pklIi~~~s~~- 262 (529)
+|++.|++.+..| + +......+ .+.|. ++++++-+ +++.+|+++|++.+.. .+|++|.+..+++
T Consensus 66 ~~~~~vi~~~~aH---i---~~~E~ga~~~~~G~--~~~~l~~~-~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~ 136 (290)
T PF01212_consen 66 RPGESVICADTAH---I---HFDETGAIEELSGA--KLIPLPSD-DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTEL 136 (290)
T ss_dssp HTTEEEEEETTEH---H---HHSSTTHHHHHTTC--EEEEEBEC-TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTT
T ss_pred hcCCceeccccce---e---eeeccchhhHhcCc--EEEECCCc-ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcC
Confidence 9999999887643 2 11111222 34554 66676543 2389999999999987 3578999987766
Q ss_pred --CCCC---CHHHHHHHHHHhCCEEEEecccccccc-cccccCCC-CCcccEEEecccccccCCCCeEEEeeCCCcchhH
Q 009673 263 --PRDF---DYPRMRQIADAVGALLMMDMAHISGLV-AASVVADP-FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVE 335 (529)
Q Consensus 263 --p~~~---d~~~i~~ia~~~g~~livD~ah~~Gli-~~~~~~~~-~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~ 335 (529)
++.. ++++|.++|++||++|+.|+|-..... ..+..... ..++|++++|++|.+..|-|+++++++ +
T Consensus 137 ~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~------~ 210 (290)
T PF01212_consen 137 AGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPGGAVLAGNK------E 210 (290)
T ss_dssp TTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSSEEEEEESH------H
T ss_pred CCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEcccccccceEEEech------H
Confidence 3444 567788889999999999988543221 11111111 137999999999999888889999998 5
Q ss_pred HHhhhccc--ccCC--CCCCChHHHHHH----HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC
Q 009673 336 LESAINNA--VFPG--LQGGPHNHTIGG----LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG 400 (529)
Q Consensus 336 l~~~i~~~--~~p~--~~g~p~~~~iaa----la~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~ 400 (529)
+.++.... .+.+ .+.+ .+++ ...++... +.+.....+..++++.|.+.|+..|+.+..+
T Consensus 211 ~i~~~~~~~k~~gg~~~~~G----~~~a~~~~~~~~l~~l--~~~~~~~~~~~~~A~~La~~l~~~~~~~~~~ 277 (290)
T PF01212_consen 211 FIAKARRQRKRLGGGMRQAG----VLAAAELYQFAALRAL--ELWLERARHANAMAKRLAAGLEALGGVLPRP 277 (290)
T ss_dssp HHHHHHHHHHHHTHHHHHTT----HHHHHHHHHHHHHCHE--ECSHHHHHCHHHHHHCHHHCHHEECEEEETT
T ss_pred HHHHHHHHHHHhccCeeecc----eeeeechhhHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 43321111 1110 0111 1222 01122222 2235666777888999999999888876654
No 292
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.59 E-value=1.7e-12 Score=137.90 Aligned_cols=324 Identities=15% Similarity=0.093 Sum_probs=177.3
Q ss_pred cceeEecCC-----CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673 103 KSLELIASE-----NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~ase-----n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG 177 (529)
..|++..+- .+.+|+|.+|+...+.+.. .|...++...+ .++++++.+.... . .+..+||
T Consensus 49 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-------~~~~~~~~~~~----lae~l~~~~~~~~-~---v~~~~sG 113 (423)
T TIGR00713 49 EYIDYVLSWGPLILGHAHPRVVEAVKEALERGT-------SYGAPTEAEIL----LAKEIISRVPSVE-M---VRFVNSG 113 (423)
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCC-------cCCCCCHHHHH----HHHHHHHhCCccc-E---EEEeCCH
Confidence 346665432 2568999999988775421 11111222222 3366667665432 1 2446888
Q ss_pred HHHHHHHHHhh--cCCCCEEEEcCCCCCccccccccccccccccccce---------------EEEEEcccCCCCCCCCH
Q 009673 178 SPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY---------------FESMPYRLDESTGLVDY 240 (529)
Q Consensus 178 s~A~~~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~---------------~~~v~~~v~~~~~~iD~ 240 (529)
++|+..++... ....++|+..++.|-|+.. +. ......+.. ...+.++ ..|+
T Consensus 114 seA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~ 182 (423)
T TIGR00713 114 TEATMSAVRLARGYTGRDKIIKFEGCYHGHHD-AL----LVKAGSGAATLGLPTSPGVPEDFAKLTLVLP------YNDL 182 (423)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEcCCCCCChh-hh----hccccCcccccCCCCCCCCCcccccceEEeC------CCCH
Confidence 99999888753 2346899999887644310 00 000000000 0011111 1389
Q ss_pred HHHHHHhhh--cCCcEEEEc-CCCCCC-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CCCCC-cccEEEe
Q 009673 241 DMLEKTAIL--FRPKLIIAG-ASAYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK-YCDVVTT 310 (529)
Q Consensus 241 d~le~~i~~--~~pklIi~~-~s~~p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~~~-~aDiv~~ 310 (529)
+++++.++. .++++|++. .+++++ ..+ +++|+++|++||+++|+|++| .|+...... ...+. ..|++
T Consensus 183 ~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~-~g~r~g~~~~~~~~~~~pDi~-- 259 (423)
T TIGR00713 183 EALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVM-TGFRVALGGAQEYFGVEPDLT-- 259 (423)
T ss_pred HHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccc-cccccCcchhHHHhCCCcchh--
Confidence 999998874 256778775 444444 322 789999999999999999996 555321110 00111 24655
Q ss_pred cccccc-cCCCCeEEEeeCCCcchhHHHhhhccc---ccCCCCCCChHHHHHHHHHHHHHhcCchH-HHHHHHHHHHHHH
Q 009673 311 TTHKSL-RGPRGGMIFFKKDPVLGVELESAINNA---VFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRA 385 (529)
Q Consensus 311 S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~---~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~~a~~ 385 (529)
+++|.+ +|+|.|++++++ ++.+.+... ......+++.....+++ ++|+.+...++ ....+.....++.
T Consensus 260 t~sK~l~~G~pig~v~~~~------~i~~~~~~~~~~~~~~T~~~~~~~~aaa~-a~l~~~~~~~~~~~~~~~~~~~~~~ 332 (423)
T TIGR00713 260 TLGKIIGGGLPVGAFGGRR------EIMERLAPEGPVYQAGTLSGNPLAMAAGL-ATLKLLDEEGVYTELDELAKRLAEG 332 (423)
T ss_pred hhhhhhcCCCceeeeeEHH------HHHHhhCcCCCeeeccCCCCCHHHHHHHH-HHHHHHhcccHHHHHHHHHHHHHHH
Confidence 578998 568899999988 677776531 12223344444444443 46776554333 2333333333344
Q ss_pred HHHHHHhcCcEEecCCCCCceEEEccCCCC---------CcH---HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc
Q 009673 386 LASRLVELGYKLVSGGSDNHLVLVDLRPMG---------IDG---ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS 453 (529)
Q Consensus 386 l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~---------i~~---~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~ 453 (529)
|.+.+.+.++.....+. ..++.+.+.... .+. ..+.+.|.++||.+... ..+.+|++.
T Consensus 333 l~~~~~~~~~~~~v~~~-g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~---------~~~~~~l~~ 402 (423)
T TIGR00713 333 LSEVLEDTGIPHTVNRV-GSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPS---------QFEACFLSA 402 (423)
T ss_pred HHHHHHhcCCCeEEEee-ccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecC---------CccceeeEC
Confidence 44445555654321111 122222221110 112 24556676799998431 113478764
Q ss_pred CCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 454 PAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 454 ~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+ ++++|++++.+.|.+++.
T Consensus 403 ~------~t~~~i~~~~~~l~~~l~ 421 (423)
T TIGR00713 403 A------HTEEDIENTIEAAEEVFA 421 (423)
T ss_pred C------CCHHHHHHHHHHHHHHHh
Confidence 3 468999999999988775
No 293
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.58 E-value=6.1e-13 Score=132.04 Aligned_cols=246 Identities=18% Similarity=0.262 Sum_probs=138.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCC-CC---------Cccccccccccc
Q 009673 145 YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDL-PH---------GGHLSHGFMTPK 214 (529)
Q Consensus 145 ~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~-~~---------~g~~s~g~~~~~ 214 (529)
-.|.+| +-+++.||++.+- |..|..|||+|+..++.++++|||+++...- +| .+. ..|
T Consensus 55 GRd~le----~iyA~vfgaE~AL--VRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~-~~G----- 122 (403)
T PF06838_consen 55 GRDKLE----RIYADVFGAEDAL--VRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGN-GPG----- 122 (403)
T ss_dssp HHHHHH----HHHHHHCT-SEEE--EETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSS-SSS-----
T ss_pred cHHHHH----HHHHHHhCchhhh--hcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCC-CCC-----
Confidence 456666 6789999999752 5677789999999999999999999997541 22 111 111
Q ss_pred cccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC-CCCCC--CC---CHHHHHHHHHHh--CCEEEEec
Q 009673 215 RRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA-SAYPR--DF---DYPRMRQIADAV--GALLMMDM 286 (529)
Q Consensus 215 ~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~-s~~p~--~~---d~~~i~~ia~~~--g~~livD~ 286 (529)
.+.-.|. ....+++. +++.+|+|.+++.+++ ++|+|.+.- -.|.. .. +++++.++.|+. ++++++|.
T Consensus 123 -SL~e~Gi--~Y~~v~L~-~dg~~D~~~i~~~~~~-~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDN 197 (403)
T PF06838_consen 123 -SLKEFGI--KYREVPLT-EDGTIDWEAIKKALKP-NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDN 197 (403)
T ss_dssp -STGGGT---EEEE--B--TTSSB-HHHHHHHHHT-TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-
T ss_pred -ChHHhCc--eeEEEeec-CCCCcCHHHHHHhhcc-CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 1222344 33445565 4689999999999997 899999873 34543 23 455555555554 78999999
Q ss_pred ccccccccccccCCCCC-cccEEEecccccccC---CCCeEEEeeCCCcchhHHHhhh-cccccCCCCC--CChHHHHHH
Q 009673 287 AHISGLVAASVVADPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAI-NNAVFPGLQG--GPHNHTIGG 359 (529)
Q Consensus 287 ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~G---prgG~i~~~~~~~~~~~l~~~i-~~~~~p~~~g--~p~~~~iaa 359 (529)
++. .++- ...|.. ++|++.+|+-|...| |-||+|++++ ++.++. .+...||+.. ++.....-.
T Consensus 198 CYG-EFvE---~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~------~lVe~~a~RLTaPGiG~e~G~t~~~~R~ 267 (403)
T PF06838_consen 198 CYG-EFVE---TQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRK------DLVERAAYRLTAPGIGKEVGATLGTNRL 267 (403)
T ss_dssp TTT-TTTS---SS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESH------HHHHHHHHHHS-TTTGGGSS--TTTHHH
T ss_pred Ccc-eecc---ccCccccchhheeccceeCCCCCccCcCCEEechH------HHHHHHHhhhcCCccccccccCcchHHH
Confidence 842 2221 223444 899999999999854 7889999998 777765 3344566521 111111110
Q ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce---EEEccCCCCCcHHHHHHhHh
Q 009673 360 LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL---VLVDLRPMGIDGARVEKILD 426 (529)
Q Consensus 360 la~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~---~~v~~~~~~i~~~~~~~~L~ 426 (529)
+.-.|= .. ...+.+..+-+...+..++++|+++.+...+... -.+.+. +.+.+...++
T Consensus 268 ~~QGlF--lA---P~vV~eAlKgaif~A~~fe~lG~~v~P~~~~~R~DiIQai~l~----~~e~l~~FC~ 328 (403)
T PF06838_consen 268 MFQGLF--LA---PHVVGEALKGAIFAAALFEKLGFEVSPKPDDPRSDIIQAIELG----SPEKLIAFCQ 328 (403)
T ss_dssp HHHHHH--HH---HHHHHHHHHHHHHHHHHHHHTT-EEES-TTS--SSS-EEEE-S----SHHHHHHHHH
T ss_pred HHhHHh--hc---hHHHHHHHHHHHHHHHHHHHcCCcCCCCCCCCCCceEEEEECC----CHHHHHHHHH
Confidence 000110 00 3445556666776777778899999874333221 233333 4566666554
No 294
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.57 E-value=4.7e-13 Score=152.60 Aligned_cols=273 Identities=16% Similarity=0.105 Sum_probs=175.9
Q ss_pred HHHHHHHHcCCCCCCCceeeecCCh-HHHHHHHHHhh-cCCC--CEEEEcCCCCCccccccccccccccccccceEEEEE
Q 009673 153 CQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAI-LKPH--DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (529)
Q Consensus 153 a~~~la~~~g~~~~~~~~~V~~~sG-s~A~~~~l~al-l~pG--D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~ 228 (529)
.+..+++++|++.. |+..+.+ |.+..++++++ .++| |+|++.+..|+....... ......| ++++.
T Consensus 126 ~Qt~la~LtG~~~a----naSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~----t~a~~~G--~ev~~ 195 (954)
T PRK05367 126 FQTMVADLTGLEIA----NASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLR----TRAEPLG--IEVVV 195 (954)
T ss_pred HHHHHHHHHCCChh----hccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHH----HHHHhCC--CEEEE
Confidence 56889999999975 3444444 45555666666 4554 999999988866542110 0112234 46666
Q ss_pred cccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-ccc
Q 009673 229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 306 (529)
Q Consensus 229 ~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aD 306 (529)
++.+. |.+ .+ ++..+++.+|++.+ ..|+++|+++|+++|+++++|+.+.+..+. ..|-+ ++|
T Consensus 196 ~~~~~-----d~~------~~-~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l----~~pge~GaD 259 (954)
T PRK05367 196 GDAAK-----ALD------HD-DVFGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLL----TPPGEMGAD 259 (954)
T ss_pred ecCcc-----CCC------cc-cEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCC----CChhhcCCC
Confidence 55532 111 11 34455565665554 779999999999999999999876443321 22333 899
Q ss_pred EEEeccccc-----ccCCCCeEEEeeCCCcchhHHHhhhccc------------cc-----------CCCCCCChHHH--
Q 009673 307 VVTTTTHKS-----LRGPRGGMIFFKKDPVLGVELESAINNA------------VF-----------PGLQGGPHNHT-- 356 (529)
Q Consensus 307 iv~~S~hK~-----l~GprgG~i~~~~~~~~~~~l~~~i~~~------------~~-----------p~~~g~p~~~~-- 356 (529)
|+++++||| ++||..|+++++++ +.+.+... .+ ....++.+...
T Consensus 260 i~vgs~qkfg~P~g~GGP~aGflavr~~------~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~q 333 (954)
T PRK05367 260 IAVGSAQRFGVPMGFGGPHAAYFAVRDA------YKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQ 333 (954)
T ss_pred EEEeeCcccCCCCCCCCCCEEEEEECHH------HHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHH
Confidence 999999999 67886799999883 33322100 00 00123333221
Q ss_pred -HHHHHHH--HHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEc
Q 009673 357 -IGGLAVC--LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 433 (529)
Q Consensus 357 -iaala~a--l~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~ 433 (529)
+.++.++ +..+...++++..+++..++.++++.|.+.|+++..+. ....+.+.+. .+..++.+.|.++||.+.
T Consensus 334 aL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~-~f~~~~~~~~---~~~~~i~~~l~~~gi~~~ 409 (954)
T PRK05367 334 VLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDS-FFDTLTVEVG---GDAAAVLARALAAGINLR 409 (954)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCC-CCCeEEEeCC---CCHHHHHHHHHHCCceec
Confidence 2222222 23444567788899999999999999988899876542 1122334432 356889999999999984
Q ss_pred CCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673 434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 474 (529)
Q Consensus 434 ~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~ 474 (529)
.. ..+.+||+....+| ++|++.+++.|.
T Consensus 410 ~~---------~~~~l~is~~e~~t----~~did~l~~~l~ 437 (954)
T PRK05367 410 RV---------DDDHVGISLDETTT----REDLAALLAVFG 437 (954)
T ss_pred cc---------cCCEEEEEecccCC----HHHHHHHHHHHc
Confidence 31 24679999887765 899999999997
No 295
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.57 E-value=2e-13 Score=135.05 Aligned_cols=165 Identities=22% Similarity=0.167 Sum_probs=122.1
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccc
Q 009673 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (529)
Q Consensus 133 G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~ 212 (529)
||.-+|. .|+..+.+| +|++.+=|--. -+.+.||..|...++..++++||.|+..+--|||.+.--..
T Consensus 53 G~iYsRi--~NPT~~vlE----~RiAaLEGG~a-----a~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~- 120 (426)
T COG2873 53 GNIYTRI--MNPTTDVLE----ERIAALEGGVA-----ALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSH- 120 (426)
T ss_pred Cceeeec--cCchHHHHH----HHHHHhhcchh-----hhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHH-
Confidence 4444443 466778888 67777665543 24558999999999999999999999988878876432110
Q ss_pred cccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccc
Q 009673 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHIS 290 (529)
Q Consensus 213 ~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~ 290 (529)
.....|. ++..++ ..|+|.+++.|++ ++|+|++..-.||. ..|+++|.+||+++|+++|+|.+-..
T Consensus 121 ---tl~~~Gi--~v~fvd------~~d~~~~~~aI~~-nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~at 188 (426)
T COG2873 121 ---TLKRLGI--EVRFVD------PDDPENFEAAIDE-NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFAT 188 (426)
T ss_pred ---HHHhcCc--EEEEeC------CCCHHHHHHHhCc-ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCc
Confidence 1122343 555543 3469999999999 99999999888887 78999999999999999999987332
Q ss_pred ccccccccCCCCC-cccEEEecccccccCCC---CeEEEe
Q 009673 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFF 326 (529)
Q Consensus 291 Gli~~~~~~~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~ 326 (529)
. ..-.|++ ++|||+.|++||+.|-. ||+|+-
T Consensus 189 p-----yl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD 223 (426)
T COG2873 189 P-----YLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVD 223 (426)
T ss_pred c-----eecchhhcCCCEEEEeecccccCCccccceEEEe
Confidence 2 2345777 89999999999996632 355543
No 296
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.55 E-value=3.7e-12 Score=129.11 Aligned_cols=330 Identities=19% Similarity=0.195 Sum_probs=192.9
Q ss_pred cceeEecCC---C--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673 103 KSLELIASE---N--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~ase---n--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG 177 (529)
..|++.++- | --+|.+.+|+...+..-+- .+.-|+. +..+++ .+++.++.+ ..+ -....+||
T Consensus 43 ~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h---~sn~~~~-----~~~~~l-a~~L~~~s~-~~d---~vff~NSG 109 (404)
T COG4992 43 EYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWH---VSNLFYN-----EPQAEL-AEKLVELSP-FAD---RVFFCNSG 109 (404)
T ss_pred EeeeeccceeeeccCCCCHHHHHHHHHHHHHhhh---cccccCC-----hHHHHH-HHHHHhhCc-ccc---EEEEcCCc
Confidence 457766532 2 2479999999876643331 1111221 222323 367777776 333 23567899
Q ss_pred HHHHHHHHHhh---cC-CC-CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC---CCCCHHHHHHHhh
Q 009673 178 SPANFEVYTAI---LK-PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAI 248 (529)
Q Consensus 178 s~A~~~~l~al---l~-pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~~---~~iD~d~le~~i~ 248 (529)
++||.+++..- .. |+ -+|+...-.+-|. |.+ .+++.+.. +.--..|+-+.- -.-|+++++++++
T Consensus 110 aEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGR-T~g------alS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~ 182 (404)
T COG4992 110 AEANEAALKLARKYTGDPEKSKIIAFENSFHGR-TLG------ALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAID 182 (404)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCc-cce------eeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhc
Confidence 99999988654 22 22 3777776554332 111 23333321 111111222111 1348999999999
Q ss_pred hcCCcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccc-cCC-CCC-cccEEEeccccccc-C
Q 009673 249 LFRPKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VAD-PFK-YCDVVTTTTHKSLR-G 318 (529)
Q Consensus 249 ~~~pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~-~~~-~aDiv~~S~hK~l~-G 318 (529)
+ ++.+|++..- .-++ ..-+++++++|++||+++|.|+.|. |+--.|. ... -.. ..||++.. |.|. |
T Consensus 183 ~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQt-G~GRTGk~fA~e~~gV~PDI~tla--K~LgGG 258 (404)
T COG4992 183 E-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQT-GLGRTGKLFAYEHYGVEPDILTLA--KALGGG 258 (404)
T ss_pred c-CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecccc-CCCccchHHHHHHhCCCCCEEEee--ccccCC
Confidence 8 8888888632 1222 2237899999999999999999974 4322221 000 001 25888866 9994 4
Q ss_pred CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcE
Q 009673 319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYK 396 (529)
Q Consensus 319 prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~ 396 (529)
.+.|.++.++ ++.+.+....-..+.|+... ..++..++++.+.+++ ..+++.+..++|.+.|++. .++
T Consensus 259 ~PigA~la~~------~~~~~~~~G~HgSTfGGNpL-acAv~~a~l~~l~~e~---ll~~v~~~g~~~~~~L~~l~~~~~ 328 (404)
T COG4992 259 FPIGAMLATE------EIASAFTPGDHGSTFGGNPL-ACAVALAVLEVLLEEG---LLENVREKGEYLLQRLRELKRRYP 328 (404)
T ss_pred ccceeeEEch------hhhhcCCCCcccCCCCcCHH-HHHHHHHHHHHHcchh---HHHHHHHHHHHHHHHHHHHhhcCC
Confidence 5557777765 55555544333333455333 3443344677776544 4566777788888888873 444
Q ss_pred EecCCC-CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 397 LVSGGS-DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 397 v~~~gt-~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
++..-. ..-++=+.+... .....+.+.|.+.|+.+... .+..||+.-| ++ ++++|+++..+.+.+
T Consensus 329 ~v~~vRG~GLmiGiel~~~-~~a~~~~~~~~~~gvL~~~a---------~~~ViR~~Pp-L~---i~~eei~~~~~~l~~ 394 (404)
T COG4992 329 LVKEVRGRGLMIGIELKEP-YRARDIVRALREEGVLVLPA---------GPNVIRFLPP-LV---ITEEEIDEALDALER 394 (404)
T ss_pred ceeeeecceeEEEEEecCc-ccHHHHHHHHHHCCeEEecC---------CCCeEEecCC-cc---CCHHHHHHHHHHHHH
Confidence 443211 122222344332 13577888899999998532 2468999644 44 679999999999999
Q ss_pred HHHHH
Q 009673 476 GVEIT 480 (529)
Q Consensus 476 ~~~~~ 480 (529)
++...
T Consensus 395 ~l~~~ 399 (404)
T COG4992 395 ALAAA 399 (404)
T ss_pred HHHHh
Confidence 98754
No 297
>PLN02624 ornithine-delta-aminotransferase
Probab=99.53 E-value=9e-12 Score=133.78 Aligned_cols=318 Identities=17% Similarity=0.146 Sum_probs=174.9
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--- 190 (529)
-.|.|.+|+...+.. +..+.+ ++. ++...++ .+.++++++.+. .+..+||++|+..++.....
T Consensus 92 ~~p~v~~ai~~ql~~-~~~~~~--~~~--~~~~~~l----a~~L~~~~~~~~-----~~f~~SGseA~e~AlklAr~~~~ 157 (474)
T PLN02624 92 CHPKIIKALTEQAEK-LTLSSR--AFY--NDKFPEF----AEYLTSMFGYDM-----VLPMNTGAEGVETAIKLARKWGY 157 (474)
T ss_pred CCHHHHHHHHHHHHh-cCCccc--ccC--CHHHHHH----HHHHHhhcCCCe-----EEEeCChHHHHHHHHHHHHHHHH
Confidence 389999999988753 332221 222 2222223 366778887553 24469999999988863321
Q ss_pred -----C-CC-EEEEcCCCCCccccccccccccccccccceEEEEEc-ccCCCC---CCCCHHHHHHHhhhc--CCcEEEE
Q 009673 191 -----P-HD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDEST---GLVDYDMLEKTAILF--RPKLIIA 257 (529)
Q Consensus 191 -----p-GD-~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~-~v~~~~---~~iD~d~le~~i~~~--~pklIi~ 257 (529)
+ |+ +|+...-.| ||.... .++..+.......+ +..+.. ...|++.+++.++.. ++.+|++
T Consensus 158 ~~~g~~~~~~~ii~~~~~y-----HG~t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiii 230 (474)
T PLN02624 158 EKKGIPKNEAIIVSCCGCF-----HGRTLA--AISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLF 230 (474)
T ss_pred hhcCCCCCCcEEEEECCCc-----CCCCHH--HhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEE
Confidence 2 33 455554222 332110 11111110000000 000000 013788999888642 4567888
Q ss_pred cCCCCCC--CCC----HHHHHHHHHHhCCEEEEecccccccccccc-cCCC-CC-cccEEEecccccccC--CCCeEEEe
Q 009673 258 GASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASV-VADP-FK-YCDVVTTTTHKSLRG--PRGGMIFF 326 (529)
Q Consensus 258 ~~s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~-~~-~aDiv~~S~hK~l~G--prgG~i~~ 326 (529)
....+++ ..+ +++|+++|++||+++|+|++|. |+...|. .... .. ..|+++. +|.++| ++.|++++
T Consensus 231 Epv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G~GrtG~~~a~~~~~i~pDiv~l--sK~lggG~~pigav~~ 307 (474)
T PLN02624 231 EPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-GLARTGKMLACDWEEVRPDVVIL--GKALGGGVIPVSAVLA 307 (474)
T ss_pred CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcCcCcchhhHHhcCCCCCEEEe--cccccCCCCcceeeee
Confidence 7555443 344 9999999999999999999975 5432221 1100 01 3577775 599854 57888888
Q ss_pred eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC--cE----EecC
Q 009673 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YK----LVSG 400 (529)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G--~~----v~~~ 400 (529)
++ ++.+.+.........+++.....++ .++|+.+...+ ..++..++.+.+.+.|.+.. +. .+.+
T Consensus 308 ~~------~i~~~~~~~~~~~T~~g~pl~~aaa-~aaLe~l~~~~---l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg 377 (474)
T PLN02624 308 DK------DVMLCIKPGEHGSTFGGNPLASAVA-MAALQVVQDEK---LAERSAKLGQELRDQLQKIQKQFPKLIKEVRG 377 (474)
T ss_pred cH------HHHhHhccCCcCCCCCCCHHHHHHH-HHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHhCCCceEEEEe
Confidence 77 5655554332222334444444443 34676554333 33445555666666665521 21 1222
Q ss_pred CCCCceEEEccCCC---CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 401 GSDNHLVLVDLRPM---GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 401 gt~~~~~~v~~~~~---~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
. ..+..+.+... .....++.+.|.++||.+. |+ ....|||+.+.. ++++|++++++.|++++
T Consensus 378 -~-G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~----p~-----~~~~lR~~p~l~----~t~e~id~~l~~L~~~l 442 (474)
T PLN02624 378 -R-GLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAK----PT-----HDTIIRLAPPLS----ISEDELQECSKALSDVL 442 (474)
T ss_pred -e-EEEEEEEecCCCcChHHHHHHHHHHHhCCeEEe----cC-----CCCEEEEECCcc----CCHHHHHHHHHHHHHHH
Confidence 1 22333333221 1123457777888999984 32 246799986533 66999999999999887
Q ss_pred HHH
Q 009673 478 EIT 480 (529)
Q Consensus 478 ~~~ 480 (529)
...
T Consensus 443 ~~~ 445 (474)
T PLN02624 443 EHD 445 (474)
T ss_pred HHH
Confidence 543
No 298
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.52 E-value=1.1e-11 Score=119.25 Aligned_cols=342 Identities=17% Similarity=0.165 Sum_probs=185.8
Q ss_pred ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCC--CCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HH
Q 009673 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGK--RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 180 (529)
Q Consensus 104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~--r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A 180 (529)
.|.|..++.-.=|++.+.....+.+-.++|-... -.|.|.+-.+.+-+...+.+.+.+|.+-.. -|+..|+|| .+
T Consensus 32 ~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~--~NIalTnGSQs~ 109 (417)
T COG3977 32 AIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITA--QNIALTNGSQSA 109 (417)
T ss_pred ceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc--ceeeecCCccch
Confidence 3555544443456666665544433223321110 014455544544445558888999988543 488899999 77
Q ss_pred HHHHHHhhc---CCCC--EEEE-cCCCCCccccccccccccccccccceEEEE--EcccCCC---CCCCCHHHHHHHhhh
Q 009673 181 NFEVYTAIL---KPHD--RIMG-LDLPHGGHLSHGFMTPKRRVSGTSIYFESM--PYRLDES---TGLVDYDMLEKTAIL 249 (529)
Q Consensus 181 ~~~~l~all---~pGD--~Vl~-~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v--~~~v~~~---~~~iD~d~le~~i~~ 249 (529)
.+.++.-+. ..|+ +|+. +.|+|-|+- .+...+-.|... .+++.+. .+.+|+++|. +.+
T Consensus 110 fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~---------d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~e 178 (417)
T COG3977 110 FFYLFNLFAGRRSDGTEKKILLPLAPEYIGYA---------DAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IGE 178 (417)
T ss_pred HHHHHHHhcCccCCCcceeEeeccChhhcccc---------ccccCccceeeccCCcccccccceeeccCHHHcc--ccc
Confidence 777666553 3454 4444 355553321 111111111111 1112222 2578998874 334
Q ss_pred cCCcEEEEcCCCCCC-----CCCHHHHHHHHHHhCCEEEEeccccc---ccccccccCCCCCcc-cEEEeccccc-ccCC
Q 009673 250 FRPKLIIAGASAYPR-----DFDYPRMRQIADAVGALLMMDMAHIS---GLVAASVVADPFKYC-DVVTTTTHKS-LRGP 319 (529)
Q Consensus 250 ~~pklIi~~~s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~---Gli~~~~~~~~~~~a-Div~~S~hK~-l~Gp 319 (529)
.+.+|+++-|.||+ ..++.+|-++|++||++|+.|.|+.. ++++.+..+ +=+- -+.++|+||. |+|.
T Consensus 179 -~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~--~w~~NiilC~SLSK~GLPG~ 255 (417)
T COG3977 179 -STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATP--LWNENIILCMSLSKLGLPGS 255 (417)
T ss_pred -ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccc--cCCCCEEEEeehhhcCCCCc
Confidence 78899999888887 23577888899999999999998532 222222211 1122 2788999995 7899
Q ss_pred CCeEEEeeCCCcchhHHHhhhccc-----ccCCCCCCChHHHHHHHHH---HHHHhcCchH-HHHHHHHHHHHHHHHHHH
Q 009673 320 RGGMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAV---CLKHAQSPEF-KVYQNKVVSNCRALASRL 390 (529)
Q Consensus 320 rgG~i~~~~~~~~~~~l~~~i~~~-----~~p~~~g~p~~~~iaala~---al~~~~~~~~-~~~~~~i~~~a~~l~~~L 390 (529)
|.|+++.++ ++.+.+.+. ..|+-.|. ++++-.. .|..+.++-. .=|.+++......|..+|
T Consensus 256 R~GIiIane------~viqaitnmn~iisLap~~~G~----Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~l 325 (417)
T COG3977 256 RCGIIIANE------KVIQAITNMNGIISLAPGRMGP----AIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYL 325 (417)
T ss_pred ceeEEEccH------HHHHHHHhccceeeecCCCccH----HHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 999999998 677665432 12332221 2322110 1111110000 112233333333344444
Q ss_pred HhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCC--CCCCC--CCCCCCeEEEccCCCccCCCCHHHH
Q 009673 391 VELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNS--VPGDK--SALVPGGIRIGSPAMTTRGFSEKEF 466 (529)
Q Consensus 391 ~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~--~Pg~~--~~~~~~~iRig~~~~tt~g~~~~d~ 466 (529)
-+..+.+..+ ...-+.|+-+....++..++++.|+..||.+-++. .||-. =|.....+|++.. -.++.+
T Consensus 326 p~~~~~iHkp-EGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~------~~~~~i 398 (417)
T COG3977 326 PEYRCLIHKP-EGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYV------PEPEKI 398 (417)
T ss_pred CccceeeecC-CcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecC------CCHHHH
Confidence 4334444443 22344555555666788999999999999984332 23322 1223357999853 235666
Q ss_pred HHHHHHHHHHHH
Q 009673 467 VAIADFIHEGVE 478 (529)
Q Consensus 467 ~~la~~i~~~~~ 478 (529)
+.=..+|.+.++
T Consensus 399 e~Gva~lae~ve 410 (417)
T COG3977 399 EKGVAILAEEVE 410 (417)
T ss_pred HHHHHHHHHHHH
Confidence 666666655554
No 299
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.51 E-value=5.9e-12 Score=126.79 Aligned_cols=285 Identities=14% Similarity=0.133 Sum_probs=175.7
Q ss_pred CCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHH
Q 009673 165 ENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDML 243 (529)
Q Consensus 165 ~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~l 243 (529)
..+| +|..|+|. .+++.++..++++||.|++-..++.+.++ .++..| +.+++++.| ...+|+|.|
T Consensus 122 ~~~w--diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~--------s~~a~g--v~~ipv~md--~~Gi~pE~l 187 (472)
T KOG0634|consen 122 YKNW--DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQ--------SMEALG--VKIIPVKMD--QDGIDPESL 187 (472)
T ss_pred CCCc--eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHH--------hccccC--ceEEecccc--CCCCCHHHH
Confidence 4556 56678887 99999999999999999998876654432 344556 477887775 457999999
Q ss_pred HHHhhhc--------CCcEEEEc-CCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccc--c-----------
Q 009673 244 EKTAILF--------RPKLIIAG-ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAA--S----------- 296 (529)
Q Consensus 244 e~~i~~~--------~pklIi~~-~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~--~----------- 296 (529)
++.+..- +|+++..- .-.||+ .. --++|.+||++|++++|.|+.++.-.... +
T Consensus 188 ~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~ 267 (472)
T KOG0634|consen 188 EEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSS 267 (472)
T ss_pred HHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccH
Confidence 9988531 36777653 345665 22 24689999999999999999865432210 0
Q ss_pred ------ccCCCCC----cccEEEecccccc-cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHH
Q 009673 297 ------VVADPFK----YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (529)
Q Consensus 297 ------~~~~~~~----~aDiv~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~ 365 (529)
..++.+. +--|-..||+|-+ +|.|.||+.+++ .+.+++-...--.+++ |+.....-+..-|+
T Consensus 268 ~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~------~~l~ril~~ae~~t~~-pSg~sq~iv~a~l~ 340 (472)
T KOG0634|consen 268 SMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNS------LFLKRILDLAEVATSG-PSGFSQGIVYAMLK 340 (472)
T ss_pred HHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCH------HHHHHHhhhcceeecC-cccccHHHHHHHHH
Confidence 0111111 1124557999987 788999999998 4555543222111222 22111111122244
Q ss_pred HhcCchH----HHHHHHHHHHHHHHHHHHHh---cC-cEEecCCCCCceEEEccC------CCCCc-H-HHHHHhHhcCC
Q 009673 366 HAQSPEF----KVYQNKVVSNCRALASRLVE---LG-YKLVSGGSDNHLVLVDLR------PMGID-G-ARVEKILDMAS 429 (529)
Q Consensus 366 ~~~~~~~----~~~~~~i~~~a~~l~~~L~~---~G-~~v~~~gt~~~~~~v~~~------~~~i~-~-~~~~~~L~~~G 429 (529)
....++| .+.+..+..++..+..+|.+ .+ +++..+ ....+.|+.+. +..++ . +.+...+.+.|
T Consensus 341 ~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P-~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~g 419 (472)
T KOG0634|consen 341 RWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPP-KAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNG 419 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecC-CcceEEEEEecccccccccchHHHHHHHHHHHHHCC
Confidence 4333333 34445556667777777776 24 444444 34566777663 13344 2 23566678899
Q ss_pred eEEcCCCCCCCC-----CCC-CCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 430 ITLNKNSVPGDK-----SAL-VPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 430 I~v~~~~~Pg~~-----~~~-~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
|.+ ++|.. ... .+-.+|++... ...+++++-.+++..+++..
T Consensus 420 V~~----v~G~~F~v~p~~s~~kiffRls~a~-----a~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 420 VKL----VCGSWFMVDPESSWSKIFFRLSIAF-----AEPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred eEE----ecCceeEEcCccCCCcceEEEEeec-----CCHHHHHHHHHHHHHHHHHH
Confidence 998 44432 111 12379998754 34688888888888887754
No 300
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.51 E-value=3.9e-13 Score=136.60 Aligned_cols=213 Identities=20% Similarity=0.169 Sum_probs=145.6
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
|++..+.+| ..++++-|+.. .+...||..|...++..|+++||+|+..+..|+|... +.. +-....|
T Consensus 75 ~nPt~~~le----~~iaal~ga~~-----~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~--~l~--~~~~~~g 141 (409)
T KOG0053|consen 75 GNPTRDVLE----SGIAALEGAAH-----ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLR--ILR--KFLPKFG 141 (409)
T ss_pred CCCchHHHH----HHHHHHhCCce-----EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHH--HHH--HHHHHhC
Confidence 567778887 67788889886 2556899999999999999999999999988877532 110 0011122
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. +...++ .-|++++++.+++ ++++|++.+|.||. ..|+++|+++|+++|+++++|++-..+ ...
T Consensus 142 i--e~~~vd------~~~~~~~~~~i~~-~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p-----~~~ 207 (409)
T KOG0053|consen 142 G--EGDFVD------VDDLKKILKAIKE-NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSP-----YNQ 207 (409)
T ss_pred c--eeeeec------hhhHHHHHHhhcc-CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcc-----ccc
Confidence 2 333322 2356778888888 89999999999998 789999999999999999999973222 234
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
.|++ |||||+.|.+|++.|-. +|.++.+.. ++.+++..... .+.+.++ .+.+ ...++.+. .+.-+
T Consensus 208 ~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~-----~~~~~l~~~~~-~lg~~~~--p~~~-~ll~Rglk--tl~lR 276 (409)
T KOG0053|consen 208 DPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSE-----ELASRLKFLQE-DLGWCED--PFDL-FLLSRGLK--TLHLR 276 (409)
T ss_pred ChhhcCCCEEEEeeeeeecCCcceeeeEEecCcH-----HHHHHHHHHHH-HhcCCCC--HHHH-HHHhcCcc--hhhhh
Confidence 5566 69999999999998854 488888743 67666654321 1111222 1111 11122111 12345
Q ss_pred HHHHHHHHHHHHHHHHh
Q 009673 376 QNKVVSNCRALASRLVE 392 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~ 392 (529)
+++..+|+..+++.|.+
T Consensus 277 i~~~~ena~~~A~~Le~ 293 (409)
T KOG0053|consen 277 INKHSENALKIALLLEA 293 (409)
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 67777888888999877
No 301
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.50 E-value=1.4e-11 Score=129.49 Aligned_cols=313 Identities=16% Similarity=0.143 Sum_probs=171.5
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---- 189 (529)
-.|+|.+++...+.. ...++. .++ .+.+....+++.+..+.+. .+..+||++|+..++....
T Consensus 53 ~~p~v~~a~~~q~~~-~~~~~~--~~~------~~~~~~la~~l~~~~~~~~-----v~f~~SGseA~e~Aik~ar~~~~ 118 (395)
T PRK03715 53 CNPGMVEALAAQAEK-LINPSP--AFY------NEPMAKLAGLLTQHSCFDK-----VFFANSGAEANEGAIKLARKWGR 118 (395)
T ss_pred CCHHHHHHHHHHHHh-cccccc--ccc------CHHHHHHHHHHhhccCCCE-----EEEeCCcHHHHHHHHHHHHHHhh
Confidence 368888888877642 222221 111 2233333355555544332 3556899999999887663
Q ss_pred --CCC-CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCC---CCCCCHHHHHHHhhhcCCcEEEEcCCC-
Q 009673 190 --KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES---TGLVDYDMLEKTAILFRPKLIIAGASA- 261 (529)
Q Consensus 190 --~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~---~~~iD~d~le~~i~~~~pklIi~~~s~- 261 (529)
++| ++|+..+..+ ||.... .++..+.. +.....+..+. ....|++++++.+.+ ++.+|++....
T Consensus 119 ~~~~~r~~ii~~~~~y-----HG~t~~--~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aavi~Epv~~ 190 (395)
T PRK03715 119 KHKNGAYEIITFDHSF-----HGRTLA--TMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITD-KTVAVMLEPVQG 190 (395)
T ss_pred ccCCCCcEEEEECCCc-----CCChHH--HHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCC-CceEEEEeCCcC
Confidence 234 5677776543 222110 12222210 01001111000 013578999988875 67888876322
Q ss_pred CCC-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccccC-CCCeEEEeeCCCcc
Q 009673 262 YPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVL 332 (529)
Q Consensus 262 ~p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~G-prgG~i~~~~~~~~ 332 (529)
..+ ..+ +++|+++|++||+++|+|++|. |+--.|.. . .-+. ..|++++ .|.|+| ...|.+++++
T Consensus 191 ~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~GRtG~~~a~~~~gv~PDi~t~--gK~lg~G~p~~av~~~~---- 263 (395)
T PRK03715 191 EGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-GCGRTGTLFAYELSGIEPDIMTL--GKGIGGGVPLAALLAKA---- 263 (395)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCcchhhHhhcCCCCceeee--hhhhhCCcceEEEEEcc----
Confidence 122 334 8999999999999999999976 54222210 0 0011 3688765 499955 3457777777
Q ss_pred hhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----CcEEecCCCCCceEE
Q 009673 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GYKLVSGGSDNHLVL 408 (529)
Q Consensus 333 ~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~----G~~v~~~gt~~~~~~ 408 (529)
++.. ........+.++... ..++..++|+.+.++ +..+++.++.++|.+.|++. ++.-+. | ...+.-
T Consensus 264 --~i~~-~~~~~~~~T~~g~pl-~~aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~i~~vr-G-~Glm~~ 334 (395)
T PRK03715 264 --EVAV-FEAGDQGGTYNGNPL-MTAVGVAVISQLLAP---GFLEGVRARGEYLKEKLLELSEERGLEGER-G-EGLLRA 334 (395)
T ss_pred --cccc-ccCCCcCCCCCCCHH-HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHhhcCCcCeEE-c-ceeEEE
Confidence 4432 111111122233333 343333467666432 45667777788888888752 433222 2 234444
Q ss_pred EccCCCCCcHHHHHHhHhcC---CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 409 VDLRPMGIDGARVEKILDMA---SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 409 v~~~~~~i~~~~~~~~L~~~---GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
+.+... ....+.+.+.+. ||.+... .+..|||..+.. ++++|++++++.|++++..
T Consensus 335 i~l~~~--~~~~~~~~~~~~~~~Gi~~~~~---------~~~~lR~~p~l~----~t~~ei~~~~~~l~~~l~~ 393 (395)
T PRK03715 335 LLLGKD--IGPQIVEKARDMQPDGLLLNAP---------RPNLLRFMPALN----VTTEEIDQMIAMLRSVLDK 393 (395)
T ss_pred EEecCc--hHHHHHHHHHhccCCCEEEeec---------CCCEEEEeCCcc----cCHHHHHHHHHHHHHHHHh
Confidence 455321 123444444444 9998531 235799986643 6699999999999988863
No 302
>PLN00144 acetylornithine transaminase
Probab=99.50 E-value=3.7e-11 Score=125.70 Aligned_cols=316 Identities=17% Similarity=0.135 Sum_probs=175.3
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
+-.|+|.+|+...+... . +.... +. ++. .+ ...+++.+..+.+. .....||++|+..++....
T Consensus 31 h~~p~v~~ai~~q~~~~-~--~~~~~-~~-~~~--~~--~la~~l~~~~~~~~-----v~f~~sGseA~e~AlklAr~~~ 96 (382)
T PLN00144 31 HGDPDWVKAVAEQAGTL-A--HVSNV-YH-TIP--QV--ELAKRLVASSFADR-----VFFCNSGTEANEAAIKFARKYQ 96 (382)
T ss_pred CCCHHHHHHHHHHHHhc-C--Ccccc-cc-CHH--HH--HHHHHHHhcCCCCe-----EEEeCCcHHHHHHHHHHHHHHH
Confidence 34788888888777532 1 11111 11 221 11 22355666654432 2456899999998876431
Q ss_pred C------C------CCEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC---CCCCHHHHHHHhhhcCCc
Q 009673 190 K------P------HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAILFRPK 253 (529)
Q Consensus 190 ~------p------GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~~---~~iD~d~le~~i~~~~pk 253 (529)
. + ..+|+...-.|- |.... .....+.. +.....+..++. ...|++.+++.+...+++
T Consensus 97 ~~~~~~~~~~~~~~r~~ii~~~~~yH-----G~t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~a 169 (382)
T PLN00144 97 RVRAPDKKDPAASSATEFVSFSNSFH-----GRTLG--ALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTA 169 (382)
T ss_pred hccCCCCccccccccceEEEECCCcc-----cccHH--HHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeE
Confidence 1 1 246887775442 22100 01111110 000000000000 023789999888655788
Q ss_pred EEEEcCCCCCC----CCC--HHHHHHHHHHhCCEEEEeccccccccccccc-CC-CCC-cccEEEecccccc-cCCCCeE
Q 009673 254 LIIAGASAYPR----DFD--YPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTTTTHKSL-RGPRGGM 323 (529)
Q Consensus 254 lIi~~~s~~p~----~~d--~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~-~~~-~aDiv~~S~hK~l-~GprgG~ 323 (529)
+|++....+++ ... +++|+++|++||+++|.|++|. |+...+.. +. ... ..|++ +++|.+ +|.+.|+
T Consensus 170 avi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~PDi~--t~sK~l~~G~pig~ 246 (382)
T PLN00144 170 AVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQC-GLGRTGYLWAHEAYGVEPDIM--TLAKPLAGGLPIGA 246 (382)
T ss_pred EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchHhhhhhcCCCCCEE--EecccccCCcceEE
Confidence 88887544443 223 8899999999999999999954 54322311 11 011 35754 456998 4677899
Q ss_pred EEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecC-
Q 009673 324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSG- 400 (529)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~- 400 (529)
+++++ ++.+.+.........+++... .++..++++.+.+.++ .+++.+..+.+.+.|.+ .....+..
T Consensus 247 v~~~~------~~~~~~~~~~~~~T~~~~pl~-~aaa~a~l~~i~~~~~---~~~~~~~g~~l~~~l~~~~~~~~~~~~v 316 (382)
T PLN00144 247 VLVTE------KVASAINPGDHGSTFAGGPLV-CNAALAVLDKISKPGF---LASVAKKGEYLRELLRRKLGGNPHVKEV 316 (382)
T ss_pred EEEcH------HHHhccCCCCCCCCCCCCHHH-HHHHHHHHHHHhhchH---HHHHHHHHHHHHHHHHHHHhhCCCceee
Confidence 99987 677766543333334443333 3333445676654444 44444445555555543 11211111
Q ss_pred -CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 401 -GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 401 -gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+ ...+.++.+. .+...+...+.+.||.+. |+. ....||++.+.. ++++|+++.++.|.+++.
T Consensus 317 rg-~G~~~~l~l~---~~~~~~~~~~~~~Gv~i~----~~~----~~~~lrl~p~~~----~~~~~i~~~~~~l~~~l~ 379 (382)
T PLN00144 317 RG-VGLLVGIQLD---VPAGPLVDACRDSGLLVL----TAG----KGDVVRLVPPLV----ISEAELEQAVEILADCLP 379 (382)
T ss_pred ec-CceEEEEEec---CccHHHHHHHHHCCeEEe----ecC----CCCEEEEeCCCc----cCHHHHHHHHHHHHHHHH
Confidence 2 2345666552 234667788889999984 321 136899986642 458999999999998885
No 303
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.46 E-value=6.9e-11 Score=125.86 Aligned_cols=331 Identities=15% Similarity=0.080 Sum_probs=174.2
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cC
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~ 190 (529)
.-+|.|.+|+...+.. +..+..+.+ .++...+ ..+++++++.-..+ ..+..+||++|+..++... ..
T Consensus 59 h~~p~v~~a~~~q~~~-~~~~~~~~~---~~~~~~~----la~~L~~~~~~~~~---~v~f~~SGseA~e~AlklAr~~t 127 (433)
T PRK08117 59 HRHPKVVQAIKEQADK-LMHGPSGVI---YYESILK----LAEELAEITPGGLD---CFFFSNSGAEAIEGALKLAKHVT 127 (433)
T ss_pred CCCHHHHHHHHHHHHh-ccCcccccc---CCHHHHH----HHHHHHHhCCCCCC---EEEEeCcHHHHHHHHHHHHHHhc
Confidence 3578899998877643 322222211 1222222 33677777732222 2344589999999988742 11
Q ss_pred CCCEEEEcCCC-CCccccccccc-----cccccccccceEEEEEcccC---CCCC------CCCHHHHHHHhhh----cC
Q 009673 191 PHDRIMGLDLP-HGGHLSHGFMT-----PKRRVSGTSIYFESMPYRLD---ESTG------LVDYDMLEKTAIL----FR 251 (529)
Q Consensus 191 pGD~Vl~~~~~-~~g~~s~g~~~-----~~~~i~~~g~~~~~v~~~v~---~~~~------~iD~d~le~~i~~----~~ 251 (529)
...+|+..+-. ||.+...-... ......-....+..++++.. +... ..|++++++.++. .+
T Consensus 128 gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 207 (433)
T PRK08117 128 KRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEE 207 (433)
T ss_pred CCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCc
Confidence 23567766543 33221100000 00000000000112222210 0000 0256677776642 24
Q ss_pred CcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccc-cCCCC
Q 009673 252 PKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSL-RGPRG 321 (529)
Q Consensus 252 pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l-~Gprg 321 (529)
+.+||+.. ++.+...+ +++++++|++||+++|+|++|. |+...|.. . ..+. -.|+ .+++|.+ .|.+.
T Consensus 208 ~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~gr~G~~~~~~~~gv~pDi--~t~sK~lg~G~pi 284 (433)
T PRK08117 208 VAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-GFGRTGEWFAAQTFGVVPDI--MTIAKGIASGLPL 284 (433)
T ss_pred EEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccccchhHhhcCCCCCE--eehhhhccCCCcc
Confidence 55666652 22223444 9999999999999999999976 65333311 0 0111 2465 4677998 45777
Q ss_pred eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC--cEEec
Q 009673 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLVS 399 (529)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G--~~v~~ 399 (529)
|++++++ ++.+.+......+..++ +....++..++|+.+... ...+++.++.+++.+.|.+.. +.++.
T Consensus 285 gav~~~~------~i~~~~~~~~~~~T~~~-np~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~ 354 (433)
T PRK08117 285 SAVVASK------ELMEQWPLGSHGTTFGG-NPVACAAALATLEVIKEE---KLLDNANEMGAYALERLEVLKEKHPVIG 354 (433)
T ss_pred eeEEEcH------HHHhhccCCCCCCCCCc-CHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcee
Confidence 8888887 66666543333333333 333444444567765433 345566666777777776631 22221
Q ss_pred --CCCCCceEEEccCCC-----CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673 400 --GGSDNHLVLVDLRPM-----GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 472 (529)
Q Consensus 400 --~gt~~~~~~v~~~~~-----~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~ 472 (529)
.+. .-+..+.+... ......+.+.|.+.||.+... |. ....+|+..+.. ++++|++++++.
T Consensus 355 ~vrg~-Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~----~~~~lRl~p~~~----~t~~~i~~~~~~ 422 (433)
T PRK08117 355 DVRGI-GLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLC---GN----AGNVLRMIPPLT----VTKEEIDEGLDI 422 (433)
T ss_pred eeecC-CcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeec---CC----CCCEEEEeCCcc----CCHHHHHHHHHH
Confidence 111 12233344211 111244667778899988431 11 246899986543 568999999999
Q ss_pred HHHHHHH
Q 009673 473 IHEGVEI 479 (529)
Q Consensus 473 i~~~~~~ 479 (529)
|.+++..
T Consensus 423 l~~~l~~ 429 (433)
T PRK08117 423 LDEALTE 429 (433)
T ss_pred HHHHHHH
Confidence 9998864
No 304
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.46 E-value=8.8e-11 Score=124.75 Aligned_cols=329 Identities=15% Similarity=0.046 Sum_probs=171.7
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cCC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~p 191 (529)
-+|.+.+++...+.+ +...+.. ..+++ ..+ +++ +++.+..+.+... ..+..+||++|+..++... ...
T Consensus 58 ~~~~i~~a~~~~~~~-~~~~~~~---~~~~~--~~~-~la-~~l~~~~~~~~~~--~~~f~~sGsea~e~Alklar~~~~ 127 (425)
T PRK08088 58 LHPKVVAAVEAQLKK-LSHTCFQ---VLAYE--PYL-ELC-EKMNQKVPGDFAK--KTLLVTTGSEAVENAVKIARAATK 127 (425)
T ss_pred CCHHHHHHHHHHHhh-CCCcccc---ccCCH--HHH-HHH-HHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHHhC
Confidence 478888888877753 2111110 01111 122 233 5666766644311 2456799999888776543 223
Q ss_pred CCEEEEcCCCCCccccccccccccc-cc-ccc-----ceEEEEEcccCCCCCCC--CHHHHHHHhhh----cCCcEEEEc
Q 009673 192 HDRIMGLDLPHGGHLSHGFMTPKRR-VS-GTS-----IYFESMPYRLDESTGLV--DYDMLEKTAIL----FRPKLIIAG 258 (529)
Q Consensus 192 GD~Vl~~~~~~~g~~s~g~~~~~~~-i~-~~g-----~~~~~v~~~v~~~~~~i--D~d~le~~i~~----~~pklIi~~ 258 (529)
..+|+..++.|-|... +....... .. ..+ ..+..++++.+..+... +++++++.+.. .+..+|++.
T Consensus 128 r~~iv~~~~~yHG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~E 206 (425)
T PRK08088 128 RSGVIAFTGAYHGRTH-YTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIE 206 (425)
T ss_pred CCeEEEECCccCCccH-HHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEEC
Confidence 3456666766533311 10000000 00 000 00112223332111111 14568887751 245677765
Q ss_pred CC-CCCC-CC----CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccc-cCCCCeEEEeeCC
Q 009673 259 AS-AYPR-DF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL-RGPRGGMIFFKKD 329 (529)
Q Consensus 259 ~s-~~p~-~~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l-~GprgG~i~~~~~ 329 (529)
.. ++++ .. .+++|.++|+++|+++|+|++|. |+...+.. ..++ +.+.-+.|++|.+ +|.|.|++++++
T Consensus 207 pi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~-g~g~~g~~-~~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~- 283 (425)
T PRK08088 207 PVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT-GAGRTGTL-FAMEQMGVAADLTTFAKSIAGGFPLAGVTGRA- 283 (425)
T ss_pred cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcch-hHHhhcCCCCCEEEEeccccCCCcceeeEecH-
Confidence 32 3333 22 38899999999999999999965 54322211 1111 1222246778998 567889999987
Q ss_pred CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCc-EEecCCCCC
Q 009673 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGY-KLVSGGSDN 404 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~-~v~~~gt~~ 404 (529)
++.+.+.........+++.. ..++....++...... ..+++.+..+++.+.|.+ .+. ..+.+ . .
T Consensus 284 -----~~~~~~~~~~~~~t~~~~~~-~~~a~~~~l~~~~~~~---~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g-~-G 352 (425)
T PRK08088 284 -----EVMDAIAPGGLGGTYAGNPI-ACAAALAVLKVFEQEN---LLQKANALGEKLKDGLLAIAEKHPEIGDVRG-L-G 352 (425)
T ss_pred -----HHHhhcCCCCCCCCCCcCHH-HHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCeEEEec-c-c
Confidence 67777655443333444333 3333344566543333 333444444444444433 222 11222 1 3
Q ss_pred ceEEEccCC-------CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 405 HLVLVDLRP-------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 405 ~~~~v~~~~-------~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
.+.|+.+.. .......+.+.+.+.||.+. |+.. .+..||++.+.. .+++|+++.++.|.+++
T Consensus 353 ~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~----~~~~---~~~~iRl~~~~~----~t~~ei~~~i~~l~~~l 421 (425)
T PRK08088 353 AMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILL----SCGP---YYNVLRILVPLT----IEDAQIRQGLEIIAQCF 421 (425)
T ss_pred eEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEe----cCCC---CCCEEEEECCCC----cCHHHHHHHHHHHHHHH
Confidence 456666521 11124557777778898873 3221 146799987643 45899999999999888
Q ss_pred H
Q 009673 478 E 478 (529)
Q Consensus 478 ~ 478 (529)
.
T Consensus 422 ~ 422 (425)
T PRK08088 422 D 422 (425)
T ss_pred H
Confidence 6
No 305
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.44 E-value=1.2e-10 Score=122.75 Aligned_cols=323 Identities=15% Similarity=0.126 Sum_probs=174.0
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
.-.|.|.+|+...+.+-. +.+..++ ++. .+ ...+++.+++... + -....+||++|+..++....
T Consensus 56 h~~p~v~~ai~~q~~~~~---~~~~~~~--~~~--~~--~la~~L~~~~~~~-~---~v~f~~sGseA~e~AlklAr~~~ 122 (408)
T PRK04612 56 HNDPDLVAALTEQAGKLW---HTSNVFY--SAP--PL--KLAEELVTASRFA-E---KVFLCNSGTEANEAAIKLVRKWA 122 (408)
T ss_pred CCCHHHHHHHHHHHHhcc---ccccccC--CHH--HH--HHHHHHHhhCCCC-C---EEEEcCchHHHHHHHHHHHHHHH
Confidence 347888888887765321 1111111 111 11 1235566655322 2 13456899999998876432
Q ss_pred ---C--CC-CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCC---CCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 190 ---K--PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES---TGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 190 ---~--pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~---~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
+ ++ .+|+...-.| ||.... .+...+.. +..-..++.+. -...|.+.+++.+...++.+|++..
T Consensus 123 ~~~g~~~~r~~ii~~~~~y-----HG~t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP 195 (408)
T PRK04612 123 SSQGRPADKRVIVTFRGSF-----HGRTLA--AVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEP 195 (408)
T ss_pred HhhCCCCCCcEEEEECCCc-----CCccHH--HHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEECC
Confidence 1 22 3688776543 222110 11111100 00000000000 0123788999888653456666653
Q ss_pred CC-CCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC-CcccEEEecccccc-cCCCCeEEEeeCCCc
Q 009673 260 SA-YPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-KYCDVVTTTTHKSL-RGPRGGMIFFKKDPV 331 (529)
Q Consensus 260 s~-~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~~aDiv~~S~hK~l-~GprgG~i~~~~~~~ 331 (529)
.. .++ .. -+++|+++|++||+++|+|++|. |+-..+...... .+...-+.+++|.+ +|++.|++++++
T Consensus 196 ~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~piga~~~~~--- 271 (408)
T PRK04612 196 IQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQC-GMGRTGTLFAHWQEQVTPDIVTLAKALGGGFPIGAMLAGP--- 271 (408)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCchhhhhhcCCCCCEEEEcchhcCCCceEEEEECH---
Confidence 22 111 22 38899999999999999999975 543222110000 02223334567998 466778888887
Q ss_pred chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEec--CCCCCceE
Q 009673 332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS--GGSDNHLV 407 (529)
Q Consensus 332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~--~gt~~~~~ 407 (529)
++.+.+.........+++.. ..++...+|+.+.++ +..+++.++.+++.+.|++. .+.++. .|. ..+.
T Consensus 272 ---~~~~~~~~~~~~~t~~~~p~-~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~-Gl~~ 343 (408)
T PRK04612 272 ---KVAETMQFGAHGTTFGGNPL-AAAVARVALRKLASP---QIAANVARQSAALRAGLEALNAEFGVFAQVRGR-GLML 343 (408)
T ss_pred ---HHHhhhcCCCcCCCCCCCHH-HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecc-ceEE
Confidence 66666554333333444333 344444467665443 45667777777888877663 222222 121 2233
Q ss_pred EEccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 408 LVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 408 ~v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
-+.+.+. .-....+.+.|.+.||.+.. .++..||+..+. .++++|++++.+.|.+++...
T Consensus 344 ~i~~~~~~~~~a~~i~~~l~~~Gvlv~~---------~g~~~lRl~Ppl----~it~eeid~~l~~l~~~l~~~ 404 (408)
T PRK04612 344 GAVLAPAHAGQAGAILDLAAEHGLLLLQ---------AGPDVLRFVPAL----NLTDAELADGLARLRLALADY 404 (408)
T ss_pred EEEecCchhhHHHHHHHHHHHCCeEEee---------CCCCEEEEcCCc----cCCHHHHHHHHHHHHHHHHHH
Confidence 3333221 11235677788899999832 124689997553 367999999999999988643
No 306
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.41 E-value=5.7e-11 Score=129.34 Aligned_cols=234 Identities=18% Similarity=0.148 Sum_probs=150.5
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC----C-----C------------------C--
Q 009673 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK----P-----H------------------D-- 193 (529)
Q Consensus 143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~----p-----G------------------D-- 193 (529)
.+....+|+.+.+++++++|.+. .|+. .+++||.||+.++.+..+ | + |
T Consensus 118 SP~~t~lE~~vi~~la~l~G~~~-~~G~--~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~ 194 (608)
T TIGR03811 118 SPATSQMEEEVGKEFATLMGYKN-GWGH--IVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEI 194 (608)
T ss_pred CchHHHHHHHHHHHHHHHhCCCC-CCeE--EeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccc
Confidence 34567899999999999999986 4654 346777999987665311 1 0 0
Q ss_pred -----------------------------EEEEcCCCCCccccccccccccccccccceE-EEEEcccCCCCCCCCHHHH
Q 009673 194 -----------------------------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDML 243 (529)
Q Consensus 194 -----------------------------~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~-~~v~~~v~~~~~~iD~d~l 243 (529)
+++++. .+|+|.. |.+...|.+. .++.+++| +++.+|+++|
T Consensus 195 ~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~---~aHyS~~-----KAa~ilGlG~~~vv~VpvD-~~~rmd~~~L 265 (608)
T TIGR03811 195 MDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQ---TKHYSWL-----KAADIIGIGLDQVIPVPVD-SNYRMDINEL 265 (608)
T ss_pred cccccccccchhhhhhhccccccccccceEEEECC---CccHHHH-----HHHHHcCCCcccEEEeecC-CCCcCCHHHH
Confidence 233332 2233322 3445566542 35567777 5689999999
Q ss_pred HHHhhhc----CC-cEEEEc--CCCCCCCCCHHHHHHHH---HHhCC--EEEEecccccccc---cccc-----------
Q 009673 244 EKTAILF----RP-KLIIAG--ASAYPRDFDYPRMRQIA---DAVGA--LLMMDMAHISGLV---AASV----------- 297 (529)
Q Consensus 244 e~~i~~~----~p-klIi~~--~s~~p~~~d~~~i~~ia---~~~g~--~livD~ah~~Gli---~~~~----------- 297 (529)
++.|.+. .| -+|+.+ .+..+.+.|+++|.++| +++|+ |+++|+|++ |.. ..+.
T Consensus 266 ~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyG-G~~~~l~~~~~~~~~p~~~~~ 344 (608)
T TIGR03811 266 EKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYG-GYGRAIFLDEDDNFIPYDDLQ 344 (608)
T ss_pred HHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeecccc-chhhhhhccccccccccchhh
Confidence 9988642 12 234433 44555588999999999 66888 699999854 421 1010
Q ss_pred --------c------C--------CCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcc---cc------c
Q 009673 298 --------V------A--------DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN---AV------F 345 (529)
Q Consensus 298 --------~------~--------~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~---~~------~ 345 (529)
. . ..++++|-++..+||++.-|-+ |++++++. .+.+.+.. .. .
T Consensus 345 ~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~-----~~~~~~~~~a~Yl~~~~~~~ 419 (608)
T TIGR03811 345 EVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDI-----RMRDVISYFATYVFEKGADI 419 (608)
T ss_pred cccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCH-----HHHHHHhcCcchhccccccC
Confidence 0 0 0134799999999999877877 88888875 33332211 00 1
Q ss_pred C------CCCCCChHHHHHHHHHHHHHh--cCchHHHHHHHHHHHHHHHHHHHHhcC
Q 009673 346 P------GLQGGPHNHTIGGLAVCLKHA--QSPEFKVYQNKVVSNCRALASRLVELG 394 (529)
Q Consensus 346 p------~~~g~p~~~~iaala~al~~~--~~~~~~~~~~~i~~~a~~l~~~L~~~G 394 (529)
| +..|+..-...++++.+++.+ ...+|.++.++..++++++.+.|++.+
T Consensus 420 p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~ 476 (608)
T TIGR03811 420 PALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLE 476 (608)
T ss_pred cccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1 123332223455666777766 556889999999999999999998743
No 307
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.41 E-value=1.1e-10 Score=123.79 Aligned_cols=325 Identities=18% Similarity=0.131 Sum_probs=173.1
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---- 189 (529)
-.|+|.+|+...+.. ....... . +. ++ ... ...+++.+++.-..+. ....+||++|+..++....
T Consensus 59 ~~p~v~~ai~~q~~~-~~~~~~~-~-~~-~~---~~~-~la~~l~~~~p~~~~~---v~f~~sGseA~e~A~klar~~~~ 127 (423)
T PRK05964 59 NHPYIDQAIREQLDR-LDHVIFA-G-FT-HE---PAE-RLAQRLVALTPGGLDH---VFFSDSGSVAVEVALKMALQYWR 127 (423)
T ss_pred CCHHHHHHHHHHHhh-CCCcccc-c-cC-CH---HHH-HHHHHHHHhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHHH
Confidence 468888888877643 2111000 0 11 11 112 2336677776422221 2446899999998876431
Q ss_pred ---CCC-CEEEEcCCCCCccccccccccc-ccc---ccccc--eEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEE
Q 009673 190 ---KPH-DRIMGLDLPHGGHLSHGFMTPK-RRV---SGTSI--YFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIA 257 (529)
Q Consensus 190 ---~pG-D~Vl~~~~~~~g~~s~g~~~~~-~~i---~~~g~--~~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~ 257 (529)
++| .+|+...-.|-|... +..... ... .+.+. ....++++.+ +....+++++++.+.+. +..+|++
T Consensus 128 ~~~~~~r~~ii~~~~~yHG~t~-~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~l~~~l~~~~~~iaavi~ 205 (423)
T PRK05964 128 NRGEPGRSRFLSLRGGYHGDTI-GTMSVGDRGGMHALYTPLLFEQVTAPFPPD-GYEQATLDALEALLEKHAGEIAAFIV 205 (423)
T ss_pred hcCCCCCcEEEEEcCCcCCccH-HHHhcCCCccccccccCcCCCCEEeCCCcc-hhHHHHHHHHHHHHHhCCCcEEEEEE
Confidence 133 578877755433210 100000 000 00000 0122233211 10112378888888642 3446666
Q ss_pred cC--CCCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccccCC--CCeEEE
Q 009673 258 GA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP--RGGMIF 325 (529)
Q Consensus 258 ~~--s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~Gp--rgG~i~ 325 (529)
.. ...++ ...+++|+++|++||+++|+|++| .|+...|.. . .... ..|+++. .|+|.|. +.|+++
T Consensus 206 Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tg~gr~G~~~a~~~~~v~pDi~~~--~K~l~gG~~p~~av~ 282 (423)
T PRK05964 206 EPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIA-TGFGRTGTLFACEQAGVSPDIMCL--SKGLTGGYLPLAATL 282 (423)
T ss_pred ecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCcCcchhHHHhcCCCCCeeee--ehhhhcCcccceEEE
Confidence 53 22222 224889999999999999999997 454322211 0 0011 3577655 5999553 568888
Q ss_pred eeCCCcchhHHHhhhccc------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEe
Q 009673 326 FKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV 398 (529)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~ 398 (529)
+++ ++.+.+... ...+..++ +...+++..++++.+..+ .+.+++.++.+++.+.|++. +++.+
T Consensus 283 ~~~------~i~~~~~~~~~~~~~~~~~T~~~-np~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i 352 (423)
T PRK05964 283 CTA------EIFEAFYSDDRAKAFMHSPSYTA-NPLACAAANASLDLFEDE---PVLERVAALSAGLAEGLEPFRDLPGV 352 (423)
T ss_pred EcH------HHHHhhhcCCcccccccCCCCCc-CHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhccCCCe
Confidence 877 676665321 11111222 333454444567765443 34566777777788877763 33322
Q ss_pred cC-CCCCceEEEccCCCCC--cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 399 SG-GSDNHLVLVDLRPMGI--DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 399 ~~-gt~~~~~~v~~~~~~i--~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
.. .....+..+.+..... ....+.+.|.++||.+... ...+||+.+.. ++++|++++++.+++
T Consensus 353 ~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~----------~~~lR~~p~l~----~t~edId~~v~~l~~ 418 (423)
T PRK05964 353 ADVRVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPL----------GNTIYLMPPYI----ITAEELDRITDAIVE 418 (423)
T ss_pred EEeecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEec----------CCEEEEeCCcc----cCHHHHHHHHHHHHH
Confidence 21 0122333444432110 1356778888899998431 24799986644 468999999999998
Q ss_pred HHH
Q 009673 476 GVE 478 (529)
Q Consensus 476 ~~~ 478 (529)
++.
T Consensus 419 al~ 421 (423)
T PRK05964 419 VAD 421 (423)
T ss_pred HHh
Confidence 875
No 308
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.40 E-value=1.3e-10 Score=123.32 Aligned_cols=327 Identities=16% Similarity=0.115 Sum_probs=176.6
Q ss_pred cceeEecCC--C---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673 103 KSLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~ase--n---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG 177 (529)
..|++..+. . ..+|+|.+++...+.+.. . ++...+. +....+++.+++.- .+. + ....||
T Consensus 51 ~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~--~-----~~~~~~~----~~~la~~L~~~~~~-~~~--v-~~~~sG 115 (426)
T PRK00062 51 EYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL--S-----FGAPTEL----EVELAELVIELVPS-IEM--V-RMVNSG 115 (426)
T ss_pred EEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC--c-----CCCCCHH----HHHHHHHHHHhCCC-CCE--E-EEecCH
Confidence 346665442 1 467899999988775421 1 1111221 11233666666531 222 2 446889
Q ss_pred HHHHHHHHHhhcC--CCCEEEEcCCCCCcccccccccc--cccc----ccccceEEEE---EcccCCCCCCCCHHHHHHH
Q 009673 178 SPANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTP--KRRV----SGTSIYFESM---PYRLDESTGLVDYDMLEKT 246 (529)
Q Consensus 178 s~A~~~~l~all~--pGD~Vl~~~~~~~g~~s~g~~~~--~~~i----~~~g~~~~~v---~~~v~~~~~~iD~d~le~~ 246 (529)
++|+..++..... .+++|+..+..|-|+. .+.... .... ...+.....+ .+.+ ...|++++++.
T Consensus 116 seA~e~Aik~a~~~~g~~~ii~~~~~yHG~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d~~~l~~~ 190 (426)
T PRK00062 116 TEATMSAIRLARGYTGRDKIIKFEGCYHGHA-DSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTA----PYNDLEAVEEL 190 (426)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEcCccCCch-hhhhhccCccccccCCCCCCCCCcccccceEEc----CCCCHHHHHHH
Confidence 9999998886532 3678998887664431 000000 0000 0000000000 0111 12478999888
Q ss_pred hhh--cCCcEEEEc-C-CCCCCCCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CCCCC-cccEEEecccccc
Q 009673 247 AIL--FRPKLIIAG-A-SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK-YCDVVTTTTHKSL 316 (529)
Q Consensus 247 i~~--~~pklIi~~-~-s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~~~-~aDiv~~S~hK~l 316 (529)
+.. .++.+|++. . ++.+...+ +++|+++|++||+++|+|++|. |+...+.. ...+. ..|+ .+++|.+
T Consensus 191 i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-G~r~g~~~~~~~~~~~pDi--~~~gK~l 267 (426)
T PRK00062 191 FEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT-GFRVALGGAQGYYGVTPDL--TTLGKII 267 (426)
T ss_pred HHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh-ccccCCccHHHHhCCCcch--HhhhhHh
Confidence 864 245677776 2 23333445 8999999999999999999975 65322111 11111 2465 4567998
Q ss_pred -cCCCCeEEEeeCCCcchhHHHhhhccc--ccC-CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673 317 -RGPRGGMIFFKKDPVLGVELESAINNA--VFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (529)
Q Consensus 317 -~GprgG~i~~~~~~~~~~~l~~~i~~~--~~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~ 392 (529)
.|++.|++++++ ++.+.++.. .+. ...+++.. ..++..++|+.+... +..+++.++.+++.+.|++
T Consensus 268 ~~G~p~ga~~~~~------~i~~~~~~~~~~~~~~T~~~~p~-~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~ 337 (426)
T PRK00062 268 GGGLPVGAFGGRR------EIMEQLAPLGPVYQAGTLSGNPL-AMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKE 337 (426)
T ss_pred hCCCcceeeeEHH------HHHHhhccCCCceecccCcCCHH-HHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHH
Confidence 466788888887 677766421 111 12234333 344444467766443 3456666666777776654
Q ss_pred ----cCcEEecCCCCCceEEEccCCCCC---------c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCC
Q 009673 393 ----LGYKLVSGGSDNHLVLVDLRPMGI---------D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM 456 (529)
Q Consensus 393 ----~G~~v~~~gt~~~~~~v~~~~~~i---------~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~ 456 (529)
.++.....+ ...+.-+.+..... + ...+.+.|.++||.+... ....+|+. +
T Consensus 338 ~~~~~~~~~~vrg-~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~---------~~~~~~~~---~ 404 (426)
T PRK00062 338 AAKKAGIPLTVNR-VGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPS---------QFEAGFVS---A 404 (426)
T ss_pred HHHHcCCceEEEE-ecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecC---------CcCceeee---c
Confidence 354331111 12222222221100 1 135777788899998532 11235553 2
Q ss_pred ccCCCCHHHHHHHHHHHHHHHH
Q 009673 457 TTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 457 tt~g~~~~d~~~la~~i~~~~~ 478 (529)
-++++|++++.+.+.+++.
T Consensus 405 ---~~t~~ei~~~~~~l~~~l~ 423 (426)
T PRK00062 405 ---AHTDEDIEKTLEAARKAFA 423 (426)
T ss_pred ---cCCHHHHHHHHHHHHHHHH
Confidence 2679999999999998875
No 309
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.39 E-value=6.7e-10 Score=117.73 Aligned_cols=328 Identities=14% Similarity=0.114 Sum_probs=173.3
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhh-cC
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAI-LK 190 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs~A~~~~l~al-l~ 190 (529)
.-.|.|.+|+...+.. +.. .....+ .++ ..+ ++ .+++.+++... .+ ..+..+||++|+..++... .-
T Consensus 56 h~~p~v~~ai~~ql~~-~~~--~~~~~~-~~~--~~~-~l-a~~l~~~~p~~~~~---~~~f~~sGseA~e~AlklAr~~ 124 (421)
T PRK09792 56 HRHPDLVAAVEQQLQQ-FTH--TAYQIV-PYE--SYV-TL-AEKINALAPVSGQA---KTAFFTTGAEAVENAVKIARAH 124 (421)
T ss_pred CCCHHHHHHHHHHHHh-ccC--cccCcc-CCH--HHH-HH-HHHHHHhCCCCCCc---eEEEeCChHHHHHHHHHHHHHh
Confidence 3478888888877653 221 110001 111 112 22 35566665422 11 1345689999999887643 22
Q ss_pred CC-CEEEEcCCCCCccccccccc-------cccccccccceEEEEEcccCCCCCC---CCHHHHHHHhhh----cCCcEE
Q 009673 191 PH-DRIMGLDLPHGGHLSHGFMT-------PKRRVSGTSIYFESMPYRLDESTGL---VDYDMLEKTAIL----FRPKLI 255 (529)
Q Consensus 191 pG-D~Vl~~~~~~~g~~s~g~~~-------~~~~i~~~g~~~~~v~~~v~~~~~~---iD~d~le~~i~~----~~pklI 255 (529)
.| .+|+...-.|-|.-. +... ...........+..++++.+. .+. -|++.+++.+.. .++.+|
T Consensus 125 tgr~~ii~~~~~yHG~t~-~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~~~~~~~~iaav 202 (421)
T PRK09792 125 TGRPGVIAFSGGFHGRTY-MTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFKSDIEAKQVAAI 202 (421)
T ss_pred cCCCeEEEECCCcCCccH-HHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHHhccCCCceEEE
Confidence 33 478877754433210 0000 000000000011233443321 111 134778887762 256788
Q ss_pred EEcCCCCCC---CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC---CC-cccEEEecccccc-cCCCCeEE
Q 009673 256 IAGASAYPR---DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK-YCDVVTTTTHKSL-RGPRGGMI 324 (529)
Q Consensus 256 i~~~s~~p~---~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~-~aDiv~~S~hK~l-~GprgG~i 324 (529)
++....+++ ..+ +++|+++|++||+++|+|+++. |+...+.. .. +. ..|++ +++|+| +|.+.|++
T Consensus 203 i~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~G~~-~a~~~~~~~pDi~--t~gK~l~~G~pigav 278 (421)
T PRK09792 203 IFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQS-GFARTGKL-FAMDHYADKPDLM--TMAKSLAGGMPLSGV 278 (421)
T ss_pred EEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCCch-hHHHhcCCCCcEE--EeehhhcCCCceEEE
Confidence 887443332 334 8899999999999999999854 44222211 11 11 35765 456998 46778999
Q ss_pred EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEecCCC
Q 009673 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSGGS 402 (529)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~~gt 402 (529)
++++ ++.+.+.......+.+++.....++++ .++.+.+. +..+++.+..+++.+.|++. .++.+..-+
T Consensus 279 ~~~~------~i~~~~~~~~~~~T~~gnpl~~aaa~a-~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vr 348 (421)
T PRK09792 279 VGNA------NIMDAPAPGGLGGTYAGNPLAVAAAHA-VLNIIDKE---SLCERANQLGQRLKNTLIDAKESVPAIAAVR 348 (421)
T ss_pred EEcH------HHHhccCCCCcCCCCCCCHHHHHHHHH-HHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhCCCcceec
Confidence 9987 677666543333334444444444443 55655433 33445545555555555441 122121111
Q ss_pred -CCceEEEccCCCC------CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 403 -DNHLVLVDLRPMG------IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 403 -~~~~~~v~~~~~~------i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
...+.++.+.... .....+...+.++||.+... | . ....||+..+. + ++++|+++.+++|.+
T Consensus 349 G~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~---g---~-~~~~irl~P~l-~---i~~~ei~~~~~~l~~ 417 (421)
T PRK09792 349 GLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTC---G---A-YGNVIRFLYPL-T---IPDAQFDAAMKILQD 417 (421)
T ss_pred ccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeec---C---C-CCCEEEEeCCC-c---CCHHHHHHHHHHHHH
Confidence 1244566664221 12345667777899998311 1 1 24689997554 2 568999999999988
Q ss_pred HHH
Q 009673 476 GVE 478 (529)
Q Consensus 476 ~~~ 478 (529)
++.
T Consensus 418 ~l~ 420 (421)
T PRK09792 418 ALS 420 (421)
T ss_pred HHh
Confidence 874
No 310
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.38 E-value=4.6e-10 Score=119.87 Aligned_cols=323 Identities=14% Similarity=0.091 Sum_probs=172.6
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
.-.|+|.+|+...+.. ... . .+++. ++. .....+++.+++.-..+ ......|||+|+..++....
T Consensus 98 H~~p~v~~Ai~~ql~~-l~~--~-~~~~~-~~~----~~~lae~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~t 165 (459)
T PRK11522 98 HRNPVVVSAVQNQLAK-QPL--H-SQELL-DPL----RAMLAKTLAALTPGKLK---YSFFCNSGTESVEAALKLAKAYQ 165 (459)
T ss_pred CCCHHHHHHHHHHHhh-Ccc--c-ccccC-CHH----HHHHHHHHHHhCCCCCC---EEEEeCCchHHHHHHHHHHHHHh
Confidence 3479999999887753 211 1 11111 221 22223666666543222 12446899999998886431
Q ss_pred -CCC-CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC---CCCCHHHHHHHhhh-----cCCcEEEEc
Q 009673 190 -KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAIL-----FRPKLIIAG 258 (529)
Q Consensus 190 -~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~~---~~iD~d~le~~i~~-----~~pklIi~~ 258 (529)
+.| .+|+...-.| ||.... .+...+.. +..-..+..+.. ...|.+++++.+.. .+..+||+.
T Consensus 166 ~~~gr~~ii~~~~~y-----HG~t~~--~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvE 238 (459)
T PRK11522 166 SPRGKFTFIATSGAF-----HGKSLG--ALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILE 238 (459)
T ss_pred ccCCCcEEEEecCCC-----CCCcHH--HhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEe
Confidence 123 3577665443 222100 11111110 000000110000 12377888887753 133456665
Q ss_pred C--CCCCCCCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccccCC--CCeEEEee
Q 009673 259 A--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP--RGGMIFFK 327 (529)
Q Consensus 259 ~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~Gp--rgG~i~~~ 327 (529)
. ++.+...+ +++++++|++||+++|+|++|. |+--.|.. . .-+. ..|+++ +.|.|+|. ..|.++++
T Consensus 239 pv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt--~gK~lggG~~Pigav~~~ 315 (459)
T PRK11522 239 PIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQT-GMGRTGKMFACEHENVQPDILC--LAKALGGGVMPIGATIAT 315 (459)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHcCCEEEecccee-cCCccchhhhhhccCCCCCEEE--echhhhCCCccceeEEEc
Confidence 2 22223344 8999999999999999999984 53211210 0 0011 358875 46999652 45555565
Q ss_pred CCCcchhHHHhhhccc--ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcE-EecC--
Q 009673 328 KDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYK-LVSG-- 400 (529)
Q Consensus 328 ~~~~~~~~l~~~i~~~--~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~-v~~~-- 400 (529)
+ ++.+.+... .+..+.+++.. ..++..++|+.+.++ +..+++.++.++|.+.|++. .+. ++..
T Consensus 316 ~------~i~~~~~~~~~~~~~T~~gnp~-~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~Vr 385 (459)
T PRK11522 316 E------EVFSVLFDNPFLHTTTFGGNPL-ACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREYPDLVQEAR 385 (459)
T ss_pred H------HHHHHhccCCcccCCCCCCCHH-HHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeEE
Confidence 5 455544221 22223344333 333333467776553 34677777788888888763 232 2211
Q ss_pred CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 401 GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 401 gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
| ...+.-+.+.... ....+.+.|.++||.+... . .....+|+..+.. ++++|++++++.+.+++...
T Consensus 386 G-~Gl~~giel~~~~-~~~~i~~~l~~~Gvl~~~~-~------~~~~~lr~~Ppl~----~t~~~id~~l~~l~~~l~~~ 452 (459)
T PRK11522 386 G-KGMLMAIEFVDNE-IGYNFASEMFRQRVLVAGT-L------NNAKTIRIEPPLT----LTIEQCEQVLKAARKALAAM 452 (459)
T ss_pred e-ceeEEEEEecCch-HHHHHHHHHHHCCeEEEec-C------CCCCEEEEECCcc----CCHHHHHHHHHHHHHHHHHH
Confidence 1 1233444443321 2345777787899998532 1 1246799976533 67999999999999988754
No 311
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.37 E-value=4.8e-10 Score=116.19 Aligned_cols=304 Identities=15% Similarity=0.128 Sum_probs=166.7
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCC
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 191 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~p 191 (529)
.-.|+|.+|+...+.+-.. .+..| . ++...++ .++++++++.+. .+..+|||+|+..++... ..+
T Consensus 40 h~~p~v~~ai~~ql~~~~~---~~~~~-~-~~~~~~l----a~~l~~~~~~~~-----v~~~~SGseA~e~Alklar~~~ 105 (364)
T PRK04013 40 HNHPEWVEEMSEQLEKLVV---AGPMF-E-HEEKEEM----LEELSKWVNYEY-----VYMGNSGTEAVEAALKFARLYT 105 (364)
T ss_pred CCCHHHHHHHHHHHHhcCC---ccCCc-C-CHHHHHH----HHHHHhhcCCCE-----EEEeCchHHHHHHHHHHHHHHh
Confidence 3468888988877754221 11111 1 2222222 366777776653 255699999999988755 345
Q ss_pred C-CEEEEcCCCCCccccccccccccccccccc-----eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCC
Q 009673 192 H-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPR 264 (529)
Q Consensus 192 G-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~-----~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~-~p~ 264 (529)
| ++|+..+..|-|... + .+...+. .+.+...++.... ..|.+.+++.+.+ ++.+|++.... .++
T Consensus 106 gr~~Ii~~~~syHG~t~-~------~ls~~~~~~~~~~~~p~~~~~~~~~-~~d~~~l~~~i~~-~~aAvivEpi~g~gG 176 (364)
T PRK04013 106 GRKEIIAMTNAFHGRTM-G------ALSATWKPKYREDFEPLVPGFKHIP-FNDVEAAKEAITK-ETAAVIFEPIQGEGG 176 (364)
T ss_pred CCCEEEEECCccccCch-h------hccCCCCcccccCCCCCCCCcEEec-CCCHHHHHHHhcC-CcEEEEEcCCcCCCC
Confidence 6 899988765433211 1 0111110 0111110111001 2378889988876 78888886322 222
Q ss_pred --CCC---HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccccC-CCCeEEEeeCCCcchhH
Q 009673 265 --DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVLGVE 335 (529)
Q Consensus 265 --~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~G-prgG~i~~~~~~~~~~~ 335 (529)
..| +++++++|++||+++|.|+++. |+ -.|.. . .-+. ..|+++++ |.++| ...|.++.++ +
T Consensus 177 ~~~~~~~yl~~lr~lc~~~gillI~DEv~t-G~-RtG~~~a~~~~gv~PDiv~~g--K~lggG~P~~a~~~~~------~ 246 (364)
T PRK04013 177 IVPAKEEFVKTLRDLTEDVGALLIADEVQS-GL-RTGKFLAIEHYKVEPDIVTMG--KGIGNGVPVSLTLTNF------D 246 (364)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEechhh-cC-CCCchhHHHhcCCCCCEEEec--ccccCCceeEEEEecc------c
Confidence 344 8999999999999999999975 54 33311 1 1112 46888875 99854 3446666665 3
Q ss_pred HHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCC
Q 009673 336 LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG 415 (529)
Q Consensus 336 l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~ 415 (529)
+. ......+.++......+++ +.|+.+.++++.+..++ ..+.|...-+.-+. |. .-+.-+.+..
T Consensus 247 ~~----~~~~~~T~~gnp~~~aaa~-a~l~~i~~~~l~~~~~~-------~l~~l~~~~v~~vR-G~-Gl~~gve~~~-- 310 (364)
T PRK04013 247 VE----RGKHGSTFGGNPLACKAVA-VTLRILRRERLVEKAGE-------KFIEIKGERVVTTR-GR-GLMIGIVLKK-- 310 (364)
T ss_pred cc----CCCcCCCCCcCHHHHHHHH-HHHHHHHhccHHHHHHH-------HHHHhccCcceeee-eC-cEEEEEEeCC--
Confidence 31 1112233444333333333 35776655443222222 11233221111111 11 1223334432
Q ss_pred CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 416 IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 416 i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
....+.+.+.++|+.+... +...||+. |.++ ++++|++++.++|.+++..
T Consensus 311 -~~~~i~~~~~~~Gll~~~~---------g~~vlr~~-Ppl~---it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 311 -PVGKYVEELQNRGYLVHTA---------GQRVIRLL-PPLI---ISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred -cHHHHHHHHHhCCcEEeeC---------CCCEEEEe-CCcc---cCHHHHHHHHHHHHHHHHH
Confidence 1345777778899998431 23579996 4455 6799999999999999864
No 312
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.37 E-value=1.6e-09 Score=111.34 Aligned_cols=320 Identities=18% Similarity=0.094 Sum_probs=177.7
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cCCC
Q 009673 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 192 (529)
Q Consensus 115 ~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~pG 192 (529)
+|.|.+|+...+.+..+.|.|. ++|-...+.+.+++..-. . + -.++|||+|+..++..- .---
T Consensus 71 ~p~V~~Av~~~l~~G~~fg~Pt-----------e~Ei~~Aell~~~~p~~e-~--v-rfvnSGTEAtmsAiRlARa~TgR 135 (432)
T COG0001 71 HPAVVEAVQEQLERGLSFGAPT-----------ELEVELAELLIERVPSIE-K--V-RFVNSGTEATMSAIRLARAYTGR 135 (432)
T ss_pred CHHHHHHHHHHHHhcCCCCCCC-----------HHHHHHHHHHHHhcCccc-E--E-EEecchhHHHHHHHHHHHHhhCC
Confidence 6789999999998887766654 334445588888887732 1 2 23589999999888643 2234
Q ss_pred CEEEEcCCCCCccccccccccccc------cccccce----EEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEc--
Q 009673 193 DRIMGLDLPHGGHLSHGFMTPKRR------VSGTSIY----FESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAG-- 258 (529)
Q Consensus 193 D~Vl~~~~~~~g~~s~g~~~~~~~------i~~~g~~----~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~~-- 258 (529)
|+|+...-.|-||........... ....|.- -..+.++ .-|++.+++++++. +...||+.
T Consensus 136 ~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~------yND~~al~~~~~~~g~~IAaVIvEPv 209 (432)
T COG0001 136 DKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLP------YNDLEALEEAFEEYGDDIAAVIVEPV 209 (432)
T ss_pred CeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEec------CCCHHHHHHHHHHcCCcEEEEEeccc
Confidence 788888766555532111100000 0001100 0111222 34899999999875 44567765
Q ss_pred CCCCCCCC----CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccc-cCCCCeEEEeeCCCcc
Q 009673 259 ASAYPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPVL 332 (529)
Q Consensus 259 ~s~~p~~~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l-~GprgG~i~~~~~~~~ 332 (529)
..|.+.+. -++.|+++|++||++||.|+.+...-+..+....-+. ..|+.+.+ |.+ .|...|.+-+++
T Consensus 210 ~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlttlG--KiIGGGlP~ga~gGr~---- 283 (432)
T COG0001 210 AGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTTLG--KIIGGGLPIGAFGGRA---- 283 (432)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcchhhhh--hhhcCCcceeeeccHH----
Confidence 23433322 3789999999999999999985422222121111111 35776654 988 456778888888
Q ss_pred hhHHHhhhcccccCCCCCCC--hHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCcEEecCCCCCce
Q 009673 333 GVELESAINNAVFPGLQGGP--HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSDNHL 406 (529)
Q Consensus 333 ~~~l~~~i~~~~~p~~~g~p--~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~~v~~~gt~~~~ 406 (529)
++.+.+...-.-+..|+. +..+++|-.++++++.+.+ ...+++.+..+.|.+.|++ .|+++......+.+
T Consensus 284 --eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~--~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~ 359 (432)
T COG0001 284 --EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEE--GVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMF 359 (432)
T ss_pred --HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceE
Confidence 777766543211111221 2334455445777766421 1234444555666665544 67765542222222
Q ss_pred E--EEccCCCCC------cH---HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 407 V--LVDLRPMGI------DG---ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 407 ~--~v~~~~~~i------~~---~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
. +.+..+... +. ..+...|.+.||.+.+ +. + ...=+| .-++++|+++..+++.+
T Consensus 360 ~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~p----s~---~--ea~flS------~ahte~di~~~~~a~~~ 424 (432)
T COG0001 360 GIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAP----SQ---F--EAGFLS------TAHTEEDIDRTLEAADE 424 (432)
T ss_pred EEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCC----cc---c--cceeee------cccCHHHHHHHHHHHHH
Confidence 2 112111110 11 1233466778999832 21 1 111222 23679999999999998
Q ss_pred HHHHH
Q 009673 476 GVEIT 480 (529)
Q Consensus 476 ~~~~~ 480 (529)
+++..
T Consensus 425 ~~~~~ 429 (432)
T COG0001 425 AFKEL 429 (432)
T ss_pred HHHHh
Confidence 77643
No 313
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.37 E-value=7.7e-10 Score=117.43 Aligned_cols=320 Identities=17% Similarity=0.133 Sum_probs=169.3
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
.-.|+|.+|+...+.+-. +. .+++. ++. .....+++.+++....+ .....+|||+|+..++....
T Consensus 91 h~hp~v~~Av~~ql~~l~---~~-~~~~~-~~~----~~~lAe~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~t 158 (442)
T TIGR03372 91 HRNPNVIAAVENQLAKQP---LH-SQELL-DPL----RALLAKTLAALTPGKLK---YSFFCNSGTESVEAALKLAKAYQ 158 (442)
T ss_pred CCCHHHHHHHHHHHHhCC---Cc-ccccC-CHH----HHHHHHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHHH
Confidence 457899999987775321 11 12221 221 11233667777643322 23456899999998876431
Q ss_pred -CCC-CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC---CCCCHHHHHHHhhh-----cCCcEEEEc
Q 009673 190 -KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAIL-----FRPKLIIAG 258 (529)
Q Consensus 190 -~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v~~~v~~~~---~~iD~d~le~~i~~-----~~pklIi~~ 258 (529)
+.| .+|+...-.|-|... + .+...+.. +.....++.+.- -..|.+.+++.++. .+..+||+.
T Consensus 159 ~~~gr~~ii~~~~~yHG~t~-~------~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvE 231 (442)
T TIGR03372 159 SPRGKFTFIAASGAFHGKSL-G------ALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILE 231 (442)
T ss_pred hhcCCcEEEEECCCccCCCH-H------HhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 123 578877654422210 1 11111110 000000010000 02367777776642 234566665
Q ss_pred C--CCCCCCCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccccCC--CCeEEEee
Q 009673 259 A--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP--RGGMIFFK 327 (529)
Q Consensus 259 ~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~Gp--rgG~i~~~ 327 (529)
. ++.+...+ +++++++|++||+++|+|++|. |+--.|.. . .-.. ..|+++ +.|.++|. ..|.++++
T Consensus 232 pv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt--~gK~lg~G~~Pigavv~~ 308 (442)
T TIGR03372 232 PIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT-GMGRTGKMFACEHEGVQPDILC--LAKALGGGVMPIGATIAT 308 (442)
T ss_pred CccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeccc-CCCccccchhhhhcCCCCCeee--ehhhhcCCcccceEEEec
Confidence 2 22223444 8999999999999999999983 43211211 0 0011 368887 56999542 46666677
Q ss_pred CCCcchhHHHhhhccc--ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcE-Eec--C
Q 009673 328 KDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYK-LVS--G 400 (529)
Q Consensus 328 ~~~~~~~~l~~~i~~~--~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~-v~~--~ 400 (529)
+ ++.+.+... .+..+.++... ..++..++|+.+.+++ ..++..+..++|.+.|++. .++ .+. .
T Consensus 309 ~------~i~~~~~~~~~~~~~T~~gnp~-~~Aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vR 378 (442)
T TIGR03372 309 E------AVFSVLFDNPFLHTTTFGGNPL-ACAAALATINELLEKN---LPAQAAIKGDFLLDGFQQLAAEYPDLIIEAR 378 (442)
T ss_pred H------HHHHhhhccCccccCCCCCCHH-HHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhCCCceEEEe
Confidence 6 566555221 22233344333 3333334677665433 3455666677777777653 122 111 1
Q ss_pred CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 401 GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 401 gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
| ...+.-+.+.... ....+.+.|.+.||.+... .| ....+||..|. + ++++|++++.+++.+++
T Consensus 379 G-~Gl~~giel~~~~-~~~~i~~~l~~~Gvl~~~~-~~------~~~~lr~~Ppl-~---~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 379 G-KGLLMAIEFRDNE-IGYAFAKELFQQNILVAGT-LN------NAKSIRIEPPL-T---ITIEQCALVIKAAKDAL 442 (442)
T ss_pred c-ceEEEEEEeCChH-HHHHHHHHHHHCCcEEeec-CC------CCCEEEEECCc-c---cCHHHHHHHHHHHHHhC
Confidence 1 2234444443221 2355777788899998532 11 13579997553 3 67999999999998753
No 314
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.36 E-value=1.3e-09 Score=117.69 Aligned_cols=324 Identities=13% Similarity=0.096 Sum_probs=170.2
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC-CCCCCCceeeecCChHHHHHHHHHhhc--
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGSPANFEVYTAIL-- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g-~~~~~~~~~V~~~sGs~A~~~~l~all-- 189 (529)
.-.|.|.+|+...+.. +...... +...++...++ .+++.+++. .+.+ .....+||++|+.+++....
T Consensus 105 h~hp~v~~Av~~ql~~-~~~~~~~--~~~~~~~~~~l----ae~L~~~~~~~~~~---~v~f~~SGsEA~e~AlKlAr~~ 174 (504)
T PLN02760 105 GSEPRLVAAATEQLNK-LPFYHSF--WNRTTKPSLDL----AKELLEMFTARKMG---KVFFTNSGSEANDTQVKLVWYY 174 (504)
T ss_pred CCCHHHHHHHHHHHhh-ccceecc--cccCcHHHHHH----HHHHHhhcCCCCCC---EEEEeCChHHHHHHHHHHHHHH
Confidence 3479999999887743 3211110 01112222222 256666643 2222 12446899999999887652
Q ss_pred -----CCC-CEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccC-----CCCC-----CCCHH
Q 009673 190 -----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLD-----ESTG-----LVDYD 241 (529)
Q Consensus 190 -----~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~------------~~~~v~~~v~-----~~~~-----~iD~d 241 (529)
.+| .+|+..+-.|-|.. .+ .+++.|. .+..+++|.. +... ...++
T Consensus 175 ~~~~g~~~r~~iI~~~~~yHG~t-~~------a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 247 (504)
T PLN02760 175 NNALGRPNKKKFIARSKSYHGST-LI------SASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLAD 247 (504)
T ss_pred HHhcCCCCCcEEEEECCCccCCh-Hh------hhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHH
Confidence 233 57777765432221 01 1111111 0111121100 0000 01134
Q ss_pred HHHHHhhh---cCCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEeccc-ccccccccccCCCCC-cccEEEe
Q 009673 242 MLEKTAIL---FRPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAH-ISGLVAASVVADPFK-YCDVVTT 310 (529)
Q Consensus 242 ~le~~i~~---~~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah-~~Gli~~~~~~~~~~-~aDiv~~ 310 (529)
++++.+.. .++.+||+.. .+.+...+ +++|+++|++||+++|+|++| .+|-........-+. ..|++++
T Consensus 248 ~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtl 327 (504)
T PLN02760 248 NLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSL 327 (504)
T ss_pred HHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEEe
Confidence 57776642 1345666652 22223444 999999999999999999998 344432211000011 3687766
Q ss_pred cccccccCC--CCeEEEeeCCCcchhHHHhhhccc-------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 009673 311 TTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381 (529)
Q Consensus 311 S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~ 381 (529)
+ |.++|. ..|.+++++ ++.+.+... ...++.++... .+++..++|+.+.++ +..+++.+
T Consensus 328 g--K~lggG~~PigAv~~~~------~i~d~~~~~~~~~~~~~h~~T~~gnPl-~~Aaala~Le~i~~~---~l~~~~~~ 395 (504)
T PLN02760 328 A--KALSSAYMPIGAVLVSP------EISDVIHSQSNKLGSFAHGFTYSGHPV-SCAVALEALKIYKER---NIPEHVNK 395 (504)
T ss_pred c--ccccCCccccceEeecH------HHHhhhhcccccccCcccCCCCCCCHH-HHHHHHHHHHHHHhC---CHHHHHHH
Confidence 4 999652 455677776 566655321 12233445333 333333467766543 34667777
Q ss_pred HHHHHHHHHHhc-CcEEecC--CCCCceEEEccCCCC-----C--c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCe
Q 009673 382 NCRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-----I--D---GARVEKILDMASITLNKNSVPGDKSALVPGG 448 (529)
Q Consensus 382 ~a~~l~~~L~~~-G~~v~~~--gt~~~~~~v~~~~~~-----i--~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~ 448 (529)
+.++|.+.|++. ...++.. |. .-+.-+.+.... . + ...+.+.|.+.||.+... ...
T Consensus 396 ~g~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------g~~ 464 (504)
T PLN02760 396 IAPRFQDGIKAFSGSPIIGEIRGT-GLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA----------GDN 464 (504)
T ss_pred HHHHHHHHHHHHhcCCCeeeEEeC-ceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEec----------CCE
Confidence 777888877662 1222211 11 122223332110 0 0 234667778899998421 246
Q ss_pred EEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 449 IRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 449 iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
+|++.| ++ ++++|++++.+++.+++...
T Consensus 465 lrl~Pp-l~---it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 465 IMMSPP-LI---ITPEEVDELISIYGKALKAT 492 (504)
T ss_pred EEEECC-CC---CCHHHHHHHHHHHHHHHHHH
Confidence 899755 33 66999999999999988643
No 315
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.36 E-value=1.4e-09 Score=115.97 Aligned_cols=330 Identities=15% Similarity=0.051 Sum_probs=174.1
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-c-C
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-L-K 190 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l-~ 190 (529)
.-.|.|.+|+...+.... . ....++ .++. .+| ..+++.+++....+ -....+|||+|+..++... . .
T Consensus 57 h~~p~v~~Ai~~ql~~~~-~--~~~~~~-~~~~--~~~--la~~L~~~~p~~~~---~v~f~~sGsEAve~AlklAr~~t 125 (443)
T PRK08360 57 HNNPRVVKAIKEQTDKLI-H--YTPIYG-FPVE--PLL--LAEKLIEIAPGDNP---KVSFGLSGSDANDGAIKFARAYT 125 (443)
T ss_pred CCCHHHHHHHHHHHHhcc-C--cccccc-CcHH--HHH--HHHHHHHhCCCCCC---EEEEcCCHHHHHHHHHHHHHHhc
Confidence 357889999887775321 1 111111 1221 122 23667777654322 1345689999999887643 2 2
Q ss_pred CCCEEEEcCCCC-Cccccccccccccccc--ccc--ceEEEEEcccCCC-CCC--------CCHHHHHHHhhh----cCC
Q 009673 191 PHDRIMGLDLPH-GGHLSHGFMTPKRRVS--GTS--IYFESMPYRLDES-TGL--------VDYDMLEKTAIL----FRP 252 (529)
Q Consensus 191 pGD~Vl~~~~~~-~g~~s~g~~~~~~~i~--~~g--~~~~~v~~~v~~~-~~~--------iD~d~le~~i~~----~~p 252 (529)
...+|+...-.| |.+......+...... ..+ ..+..++++-... .+. .+.+.+++.+.. .++
T Consensus 126 gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 205 (443)
T PRK08360 126 KRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGV 205 (443)
T ss_pred CCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCe
Confidence 234666665433 3221100000000000 000 0012223221000 000 234556666642 357
Q ss_pred cEEEEcCCCCCC--CC----CHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccc-cCCCCe
Q 009673 253 KLIIAGASAYPR--DF----DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSL-RGPRGG 322 (529)
Q Consensus 253 klIi~~~s~~p~--~~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l-~GprgG 322 (529)
++|++....+++ .. -+++|.++|++||+++|+|++|. |+...+.. . ..+. ..|+++ ++|.+ +|++.|
T Consensus 206 AAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~gr~G~~~a~~~~~~~pDiit--lsK~l~~G~pig 282 (443)
T PRK08360 206 AALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQS-GLGRTGKWFAIEHFGVEPDIIT--LGKPLGGGLPIS 282 (443)
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCccchhhhhcCCCCCEEE--ecccccCCceeE
Confidence 888887432332 22 28899999999999999999965 44322321 1 0111 357764 57998 567889
Q ss_pred EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEecC
Q 009673 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSG 400 (529)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~~ 400 (529)
++++++ ++.+.+......+..+++.....++ ..+++.+.+.+ ..+++.++.++|.+.|++. .+.++..
T Consensus 283 av~~~~------~i~~~~~~~~~~~T~~~~p~~~aaa-~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~~ 352 (443)
T PRK08360 283 ATIGRA------EIMDSLPPLAHAFTLSGNPVASAAA-LAVIEEIEEKN---LLKRAEKLGNYTKKRLEEMKKKHELIGD 352 (443)
T ss_pred EEEEcH------HHHhhhcCCCCCCCCCcCHHHHHHH-HHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHhCCCeee
Confidence 999987 6777665432333344444443333 34676654433 4566666677777777652 2332221
Q ss_pred --CCCCceEEEccCCC----CCc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673 401 --GSDNHLVLVDLRPM----GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 471 (529)
Q Consensus 401 --gt~~~~~~v~~~~~----~i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~ 471 (529)
+ ..-++-+.+... .-+ ...+...|.++||.+... ....+|+..+.. ++++|++++.+
T Consensus 353 vrg-~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---------~~~~lr~~P~l~----~t~~~id~~~~ 418 (443)
T PRK08360 353 VRG-IGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFF---------SGNVLRIQPPLT----IEKEVLDEGLD 418 (443)
T ss_pred eec-cceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeec---------CCCEEEEeCCCC----CCHHHHHHHHH
Confidence 1 112222333211 001 234667788899998431 136799975533 67999999999
Q ss_pred HHHHHHHHH
Q 009673 472 FIHEGVEIT 480 (529)
Q Consensus 472 ~i~~~~~~~ 480 (529)
.+.+++...
T Consensus 419 ~l~~~l~~~ 427 (443)
T PRK08360 419 ILEEAIEDV 427 (443)
T ss_pred HHHHHHHHH
Confidence 999998753
No 316
>PRK12403 putative aminotransferase; Provisional
Probab=99.36 E-value=9.1e-10 Score=117.84 Aligned_cols=321 Identities=17% Similarity=0.137 Sum_probs=163.6
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc--
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYG-GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~-g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all-- 189 (529)
.-.|+|.+|+...+.. +..+. .++. .++...+++ ++++++++-..+ ..+..+||++|+.+++....
T Consensus 70 h~hp~v~~A~~~q~~~-~~~~~---~~~~~~~~~~~~la----e~L~~~~p~~~~---~v~f~~SGseA~e~AiklAr~~ 138 (460)
T PRK12403 70 YGRKDLAAAAARQMEQ-LPYYN---MFFHTTHPAVIELS----ELLFSLLPGHYS---HAIYTNSGSEANEVLIRTVRRY 138 (460)
T ss_pred CCCHHHHHHHHHHHHh-CCCee---cccccCCHHHHHHH----HHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHH
Confidence 3468899998877743 32211 1222 223223333 677777763322 23556899999999887653
Q ss_pred -----CCCCEEE-EcCCC-CCccccccccccccccccccce-----------EEEEEcccC-CCCCC--------CCHHH
Q 009673 190 -----KPHDRIM-GLDLP-HGGHLSHGFMTPKRRVSGTSIY-----------FESMPYRLD-ESTGL--------VDYDM 242 (529)
Q Consensus 190 -----~pGD~Vl-~~~~~-~~g~~s~g~~~~~~~i~~~g~~-----------~~~v~~~v~-~~~~~--------iD~d~ 242 (529)
++++.++ ...-. ||..+ + .++..+.. +..++++.. ...+. .+.++
T Consensus 139 ~~~~g~~~r~~ii~~~~~yHG~t~--~------~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 210 (460)
T PRK12403 139 WQVLGKPQKKIMIGRWNGYHGSTL--A------ATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQ 210 (460)
T ss_pred HHhhCCCCCcEEEEECCCcCcccH--h------hhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHH
Confidence 3444444 33322 33211 0 11111110 111221110 00001 11355
Q ss_pred HHHHhhh---cCCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEecccccccccccc--cCCCCC-cccEEEe
Q 009673 243 LEKTAIL---FRPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASV--VADPFK-YCDVVTT 310 (529)
Q Consensus 243 le~~i~~---~~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~--~~~~~~-~aDiv~~ 310 (529)
+++.+.+ .+..+||+.. ++.+...+ +++++++|++||+++|+|++|. |+--.|. ...-+. ..|+++
T Consensus 211 le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGRtG~~~a~e~~gv~PDiv~- 288 (460)
T PRK12403 211 LEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIG-GFGRTGEWFAHEHFGFEPDTLS- 288 (460)
T ss_pred HHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhhhhhcCCCCCeEE-
Confidence 6655532 1345666652 22223344 9999999999999999999983 3311111 001111 358887
Q ss_pred cccccccCC--CCeEEEeeCCCcchhHHHhhhccc--c--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHH-HHH
Q 009673 311 TTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA--V--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV-SNC 383 (529)
Q Consensus 311 S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~--~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~-~~a 383 (529)
+.|.|+|. ..|.+++++ ++.+.+... . ..++.+++ ....++..++|+.+.+++ ..+++. ++.
T Consensus 289 -~gK~lggG~~Piga~v~~~------~i~~~~~~~~~~~~~~~T~~gn-Pl~~Aaala~L~~i~~~~---l~~~~~~~~g 357 (460)
T PRK12403 289 -IAKGLTSGYVPMGGLVLSK------RIAEALVEQGGVFAHGLTYSGH-PVAAAVAIANLKALRDEG---VVTRVKDDTG 357 (460)
T ss_pred -EcccccccccceEEEEECH------HHHHHHhcCCCccccCCCCCCC-HHHHHHHHHHHHHHHhcc---HHHHHHHHHH
Confidence 56998543 345555666 565554321 1 12233443 334444444677665433 355554 566
Q ss_pred HHHHHHHHhc--CcEEecC--CCCCceEEEccCCCC-----Cc-----HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeE
Q 009673 384 RALASRLVEL--GYKLVSG--GSDNHLVLVDLRPMG-----ID-----GARVEKILDMASITLNKNSVPGDKSALVPGGI 449 (529)
Q Consensus 384 ~~l~~~L~~~--G~~v~~~--gt~~~~~~v~~~~~~-----i~-----~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~i 449 (529)
++|.+.|++. .+.++.. |. ..+.-+.+.... .+ ...+...+.+.||.+... .+.+
T Consensus 358 ~~l~~~L~~l~~~~~~i~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------~~~~ 426 (460)
T PRK12403 358 PYLQRCLREVFGDHPLVGEVQGA-GLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST----------LGRM 426 (460)
T ss_pred HHHHHHHHHHHhcCCCEEeEeec-ceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEec----------CCEE
Confidence 7777777541 2222221 11 122223332110 01 122445567799998421 1358
Q ss_pred EEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 450 RIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 450 Rig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
|+.. .++ ++++|++++++.+++++...
T Consensus 427 ~l~P-pl~---it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 427 IMAP-ALV---AGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred EEEC-CCC---CCHHHHHHHHHHHHHHHHHH
Confidence 8864 444 57999999999999998753
No 317
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.35 E-value=6.6e-11 Score=120.00 Aligned_cols=228 Identities=18% Similarity=0.165 Sum_probs=142.1
Q ss_pred CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh
Q 009673 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (529)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g-~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al 188 (529)
+.+..++++++++...+. .|.+ ..|+-+ ..+...+... .+.++..+|.+.. +.++.-+.|++.++.++
T Consensus 35 G~s~~~~e~iea~~~~~~-~~v~----Le~~l~~g~~~~R~~~~-~~~~~~~~~aea~-----~ivnnn~aAVll~~~al 103 (395)
T COG1921 35 GRSLYSPEAIEAMKEAMR-APVE----LETDLKTGKRGARLTEL-AELLCGLTGAEAA-----AIVNNNAAAVLLTLNAL 103 (395)
T ss_pred CCccCCHHHHHHHHHHhc-ccce----eeeecccchhhHHHHHH-HHHHhcccchhhe-----eeECCcHHHHHHHHhhh
Confidence 556789999999987664 2221 112111 1223333322 2344444554442 22345558888888888
Q ss_pred cCCCCEEEEcCCCC-CccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEE-cCCCCCC--
Q 009673 189 LKPHDRIMGLDLPH-GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA-GASAYPR-- 264 (529)
Q Consensus 189 l~pGD~Vl~~~~~~-~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~-~~s~~p~-- 264 (529)
..++..|+..-+.- |+++.-. ..+...|+ +.+.++ .+..-...+++.+|.+ ++++++= -++||+.
T Consensus 104 ~~~~EvVis~g~lV~gg~~~v~-----d~~~~aG~--~l~EvG---~tn~t~~~d~~~AIne-~ta~llkV~s~~~~f~~ 172 (395)
T COG1921 104 AEGKEVVVSRGELVEGGAFRVP-----DIIRLAGA--KLVEVG---TTNRTHLKDYELAINE-NTALLLKVHSSNYGFTG 172 (395)
T ss_pred ccCCeEEEEccccccCCCCChh-----HHHHHcCC--EEEEec---ccCcCCHHHHHHHhcc-CCeeEEEEeeccccccc
Confidence 87556665433322 3443211 24456665 556654 2356677888999988 7887654 3566654
Q ss_pred CCCHHHHHHHHHHhCCEEEEecccccccccccccCC--C-C-CcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhh
Q 009673 265 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--P-F-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI 340 (529)
Q Consensus 265 ~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~-~-~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i 340 (529)
..+.+++.+||+++|+++++|.+ +|..... .+. + + .++|+|++|.+|.|.||++|+|++++ ++++++
T Consensus 173 ~l~~~~l~~ia~~~~lpvivD~a--Sg~~v~~-e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkK------elI~~l 243 (395)
T COG1921 173 MLSEEELVEIAHEKGLPVIVDLA--SGALVDK-EPDLREALALGADLVSFSGDKLLGGPQAGIIVGKK------ELIEKL 243 (395)
T ss_pred cccHHHHHHHHHHcCCCEEEecC--Ccccccc-ccchhHHHhcCCCEEEEecchhcCCCccceEechH------HHHHHH
Confidence 56788899999999999999986 4432111 111 1 1 28999999999999999999999999 788877
Q ss_pred ccccc--CCCCCCChHHHHHHHHHHHHHhcCch
Q 009673 341 NNAVF--PGLQGGPHNHTIGGLAVCLKHAQSPE 371 (529)
Q Consensus 341 ~~~~~--p~~~g~p~~~~iaala~al~~~~~~~ 371 (529)
.+... ..-.+ -..++++..+|+.....+
T Consensus 244 q~~~l~Ralrv~---K~tla~l~~aLe~y~~~~ 273 (395)
T COG1921 244 QSHPLKRALRVD---KETLAALEAALELYLQPE 273 (395)
T ss_pred HhhhhhhhhhcC---cHhHHHHHHHHHHHcCch
Confidence 65321 11122 236778888888776543
No 318
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.34 E-value=4.1e-10 Score=112.05 Aligned_cols=307 Identities=17% Similarity=0.170 Sum_probs=180.3
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh-cCC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI-LKP 191 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~al-l~p 191 (529)
.|..+++.....|..- .|..| .|...+-+.-+++.+.+.+.++=| .+.+| -+|..|+|+ .|+..++.-+ ..+
T Consensus 87 fp~Dai~RA~~~L~~~--gGs~G--aYS~SqGv~~vR~~VA~~I~rRDG-~p~~p-~dI~LT~GAS~ai~~il~l~~~~~ 160 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDC--GGSLG--AYSDSQGVPGVRKHVAEFIERRDG-IPADP-EDIFLTTGASPAIRSILSLLIAGK 160 (475)
T ss_pred CCHHHHHHHHHHHHhc--CCccc--ccccccCChhHHHHHHHHHHhccC-CCCCH-HHeeecCCCcHHHHHHHHHHhcCC
Confidence 4555555555555421 22222 233334455566666677788878 44445 468889987 7887777766 468
Q ss_pred CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhh----cCCcEEEEcCCCCCC--
Q 009673 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAIL----FRPKLIIAGASAYPR-- 264 (529)
Q Consensus 192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~----~~pklIi~~~s~~p~-- 264 (529)
.|-||++-|.|+ .|...+...|. ..++|-+|++ +|.+|.++|++.+.+ .+|+++++-+|.||+
T Consensus 161 ~~GvliPiPQYP--------LYsAti~l~~~--~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGq 230 (475)
T KOG0258|consen 161 KTGVLIPIPQYP--------LYSATISLLGG--TQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQ 230 (475)
T ss_pred CCceEeecCCCc--------hhHHHHHHhCC--cccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccch
Confidence 899999988553 33334555554 5667778865 489999999887654 467877666788887
Q ss_pred ---CCCHHHHHHHHHHhCCEEEEecccccccccccc-cCCCC---------Cccc----EEEecccccc---cCCCCeEE
Q 009673 265 ---DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF---------KYCD----VVTTTTHKSL---RGPRGGMI 324 (529)
Q Consensus 265 ---~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~~---------~~aD----iv~~S~hK~l---~GprgG~i 324 (529)
...+++|..+|.+.|++|+.|+.+ -..++.+. .-..| .+.| +...|+||.+ +|.|||+.
T Consensus 231 vls~e~ie~i~~fa~~~~l~llaDEVY-Q~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYm 309 (475)
T KOG0258|consen 231 VLSEENIEGIICFAAEEGLVLLADEVY-QDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYM 309 (475)
T ss_pred hhcHHHHHHHHHHHHHcCeEEechHHH-HhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCee
Confidence 457999999999999999999873 33333321 00011 1332 3445777876 78999986
Q ss_pred EeeC-CCcchhHHHhhh--------------cccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 009673 325 FFKK-DPVLGVELESAI--------------NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 389 (529)
Q Consensus 325 ~~~~-~~~~~~~l~~~i--------------~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~ 389 (529)
=.-. .......+.+.+ +..+.|..-|.+.+....+ +-....+.+..+++.+.+.
T Consensus 310 Ev~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~-----------Ekd~il~~l~~ra~l~~~~ 378 (475)
T KOG0258|consen 310 ESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSS-----------EKDGILSSLRSRAKLTEDA 378 (475)
T ss_pred ecccCChhHHHHHHHHHhhhhcCCccchhhhceecCCCCCCCcchhhhhh-----------hhHhHHHHHHHHhHHHHHH
Confidence 4322 110000111111 1112222334444433321 1133455666778888888
Q ss_pred HHh-cCcEEecCCCCCceEE--EccCC--------CCCcHHH--HHHhHhcCCeEEcCCCCCCCCCCCCC--CeEEEcc
Q 009673 390 LVE-LGYKLVSGGSDNHLVL--VDLRP--------MGIDGAR--VEKILDMASITLNKNSVPGDKSALVP--GGIRIGS 453 (529)
Q Consensus 390 L~~-~G~~v~~~gt~~~~~~--v~~~~--------~~i~~~~--~~~~L~~~GI~v~~~~~Pg~~~~~~~--~~iRig~ 453 (529)
+++ .|+.+.... ...+.+ ++++. .++..+. +.++|++.||.+ +||......+ -++|..+
T Consensus 379 ~ns~~gi~cn~~q-GAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcv----VPGSGFGQ~~GtyH~R~Ti 452 (475)
T KOG0258|consen 379 FNSLEGISCNPVQ-GAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICV----VPGSGFGQKEGTYHFRTTI 452 (475)
T ss_pred HhhcCceeeccCc-cceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEE----ecCCCCCCCCceeEEEEee
Confidence 888 588776531 122222 23322 2333333 568899999999 7776533333 3688754
No 319
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.34 E-value=1.6e-09 Score=114.87 Aligned_cols=322 Identities=14% Similarity=0.079 Sum_probs=172.5
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhh-cC
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAI-LK 190 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs~A~~~~l~al-l~ 190 (529)
.-.|.|.+|+...+.+ ... .....+. ++ ..++ ++ +++.+++... .+ ..+..+|||+|+..++... .-
T Consensus 56 h~~p~v~~ai~~ql~~-~~~--~~~~~~~-~~--~~~~-la-~~l~~~~p~~~~~---~~~f~~sGseA~e~AlklAr~~ 124 (421)
T PRK06777 56 HRHPKVVAAVRQQLDQ-FTH--TAYQIVP-YA--SYVT-LA-ERINALAPIDGPA---KTAFFTTGAEAVENAVKIARAY 124 (421)
T ss_pred CCCHHHHHHHHHHHhh-ccc--ccccccC-Ch--HHHH-HH-HHHHHhCCCCCCc---eEEEeCCcHHHHHHHHHHHHHh
Confidence 3478888888877653 211 1100011 11 1222 33 5666766431 12 1344689999999887643 22
Q ss_pred CC-CEEEEcCCCCCccccccccccccccccccc-------------eEEEEEcccCCC--CCCCCHHHHHHHhhh----c
Q 009673 191 PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDES--TGLVDYDMLEKTAIL----F 250 (529)
Q Consensus 191 pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~-------------~~~~v~~~v~~~--~~~iD~d~le~~i~~----~ 250 (529)
.| .+|+...-.|-|.- .+ .++..+. .+..++++-... ....|++.+++.+.. .
T Consensus 125 tgr~~ii~~~~~yHG~t-~~------~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~ 197 (421)
T PRK06777 125 TGRPGVIAFGGAFHGRT-LL------TMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPD 197 (421)
T ss_pred hCCCeEEEEcCCcCCcc-HH------HHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCC
Confidence 23 46777765442221 01 0111110 011112221000 011246677777752 2
Q ss_pred CCcEEEEcCC-CCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEecccccc-cCCC
Q 009673 251 RPKLIIAGAS-AYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPR 320 (529)
Q Consensus 251 ~pklIi~~~s-~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l-~Gpr 320 (529)
+..+|++... +..+ ..+ +++|+++|++||+++|+|++|. |+...+... ..++ ..|++ +++|.+ +|++
T Consensus 198 ~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~pDiv--~~sK~l~~G~p 274 (421)
T PRK06777 198 QVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQT-GFARTGKLFAMEYYDVKPDLI--TMAKSLGGGMP 274 (421)
T ss_pred ceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCccCCchhhhhhcCCCCCEE--eeehhhcCCCc
Confidence 3556776522 1122 233 8999999999999999999965 653333210 0011 35776 467998 5678
Q ss_pred CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----Cc-
Q 009673 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GY- 395 (529)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~----G~- 395 (529)
.|++++++ ++.+.+.......+.+++..... +..++|+.+.+ ++..+++.++.++|.+.|++. ++
T Consensus 275 igav~~~~------~i~~~~~~~~~~~T~~~~p~~~a-aa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i 344 (421)
T PRK06777 275 ISAVVGRA------EVMDAPAPGGLGGTYAGNPLAVA-AALAVLDVIAE---EKLCQRALILGAHLVEVLEKAKASCPAI 344 (421)
T ss_pred eEEEEEcH------HHHhccCCCCCCCCCCcCHHHHH-HHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 89999987 67776654433334444444433 33446765543 345677777788888888763 21
Q ss_pred EEecCCCCCceEEEccCC--CCCc----HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673 396 KLVSGGSDNHLVLVDLRP--MGID----GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 469 (529)
Q Consensus 396 ~v~~~gt~~~~~~v~~~~--~~i~----~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~l 469 (529)
..+.+ ... ++.+.+.. .+.+ ...+.+.|.+.||.+. |+.. + .+.+||..| ++ +++++++++
T Consensus 345 ~~vrg-~G~-~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~----~~~~--~-g~~lr~~pp-l~---i~~~~i~~~ 411 (421)
T PRK06777 345 VDIRA-RGS-MVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLL----SCGV--H-GNVIRFLYP-LT---IPDAQFSKA 411 (421)
T ss_pred EEecC-ceE-EEEEEEecCccCCccHHHHHHHHHHHHhCCeEEe----ecCC--C-CCEEEEeCC-CC---CCHHHHHHH
Confidence 11222 112 22322221 1111 1234444667999984 3321 1 358999855 33 568999999
Q ss_pred HHHHHHHHH
Q 009673 470 ADFIHEGVE 478 (529)
Q Consensus 470 a~~i~~~~~ 478 (529)
+++|.+++.
T Consensus 412 ~~~l~~~l~ 420 (421)
T PRK06777 412 LNILTRLLA 420 (421)
T ss_pred HHHHHHHHh
Confidence 999988763
No 320
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.34 E-value=5.4e-09 Score=110.83 Aligned_cols=331 Identities=16% Similarity=0.141 Sum_probs=173.7
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cC
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~ 190 (529)
.-.|.|.+|+...+.. ... .....+ .++ ..++ ..+++.+++.-...+ -....+|||+|+..++... ..
T Consensus 56 h~~p~v~~ai~~ql~~-l~~--~~~~~~-~~~--~~~~--la~~l~~~~p~~~~~--~v~f~~SGseA~e~AlklAr~~t 125 (425)
T PRK07495 56 HRHPRVIAAVKAQLDR-FTH--TCHQVV-PYE--NYVR--LAERLNALVPGDFAK--KTIFVTTGAEAVENAVKIARAAT 125 (425)
T ss_pred CCCHHHHHHHHHHHhh-ccC--cccCcc-CCH--HHHH--HHHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHhh
Confidence 3578888888877653 211 100001 111 1222 336677776432111 1355689999999887643 22
Q ss_pred CCCEEEEcCCCCCcc-ccc----cc-cccccccccccceEEEEEcccCCCCCC---CCHHHHHHHhhh----cCCcEEEE
Q 009673 191 PHDRIMGLDLPHGGH-LSH----GF-MTPKRRVSGTSIYFESMPYRLDESTGL---VDYDMLEKTAIL----FRPKLIIA 257 (529)
Q Consensus 191 pGD~Vl~~~~~~~g~-~s~----g~-~~~~~~i~~~g~~~~~v~~~v~~~~~~---iD~d~le~~i~~----~~pklIi~ 257 (529)
...+|+...-.|-|. +.. +. ........-.-..+..++++.+. .+. -+++++++.+.. .++.+|++
T Consensus 126 gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~~~~~~~~~iaavi~ 204 (425)
T PRK07495 126 GRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLFKADVDPQRVAAIII 204 (425)
T ss_pred CCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHHHhccCCCceEEEEE
Confidence 235777776544222 100 00 00000000000012233433221 111 124555666542 24667777
Q ss_pred cCC-CCCC-C----CCHHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEecccccc-cCCCCeEEEee
Q 009673 258 GAS-AYPR-D----FDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSL-RGPRGGMIFFK 327 (529)
Q Consensus 258 ~~s-~~p~-~----~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l-~GprgG~i~~~ 327 (529)
... .+++ . .-+++|+++|++||+++|+|++|. |+-..+.. ..... ..|+++ ++|.+ .|.+.|+++++
T Consensus 205 EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~a~~~~gv~pDi~t--lsK~l~~G~pigav~~~ 281 (425)
T PRK07495 205 EPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT-GFARTGKLFAMEHHEVAADLTT--MAKGLAGGFPLAAVTGR 281 (425)
T ss_pred CCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-cCCcCCCceeecccCCCCCEEe--ehhhhcCCccceEEEEc
Confidence 622 2222 1 238899999999999999999964 54333311 00111 246655 56998 45678999998
Q ss_pred CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEecC--CCC
Q 009673 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSG--GSD 403 (529)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~~--gt~ 403 (529)
+ ++.+.+.........+++.....+++ ++++.+... ++.+++.+..++|.+.|++. .+..+.. +.
T Consensus 282 ~------~i~~~~~~~~~~~T~~~~pl~~aaa~-a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~- 350 (425)
T PRK07495 282 A------EIMDAPGPGGLGGTYGGNPLGIAAAH-AVLDVIEEE---DLCERANQLGNRLKQRLASLRETVPEIADIRGP- 350 (425)
T ss_pred H------HHHhccCCCCcCCCCCCCHHHHHHHH-HHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecC-
Confidence 7 67666654333333444444433333 457766543 34555666666777776552 1222211 21
Q ss_pred CceEEEccCCCC---Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 404 NHLVLVDLRPMG---ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 404 ~~~~~v~~~~~~---i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
..+.++.+.... -+ ...+.+.+.+.|+.+... | + ....|||. |.++ ++++|+++++++|.+++
T Consensus 351 Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---g---~-~~~~~r~~-Ppl~---it~~~id~~~~~l~~~l 419 (425)
T PRK07495 351 GFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTC---G---V-HGNVIRFL-APIT---IQDDVFAEALDILEASI 419 (425)
T ss_pred ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeec---C---C-CCCEEEEe-CCCc---cCHHHHHHHHHHHHHHH
Confidence 344555553211 01 234666777899998431 1 1 13679996 4455 67999999999999998
Q ss_pred HH
Q 009673 478 EI 479 (529)
Q Consensus 478 ~~ 479 (529)
..
T Consensus 420 ~~ 421 (425)
T PRK07495 420 LE 421 (425)
T ss_pred HH
Confidence 64
No 321
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.33 E-value=1.3e-10 Score=121.56 Aligned_cols=299 Identities=23% Similarity=0.282 Sum_probs=184.1
Q ss_pred HHHHHHHcCCCCCCCceeeecCChHHH---HHHHHHhhc-CCCC----EEEEcCCCCCccccccccccccccccccceEE
Q 009673 154 QKRALAAFNLDENKWGVNVQPLSGSPA---NFEVYTAIL-KPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (529)
Q Consensus 154 ~~~la~~~g~~~~~~~~~V~~~sGs~A---~~~~l~all-~pGD----~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~ 225 (529)
.+++.+..|.|. +..|+.||.++ -+.++.+.+ ..|+ ..|++.-.||.+.. ...+.| .+
T Consensus 588 e~~Lc~iTG~D~----~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPA--------SA~Mag--mk 653 (1001)
T KOG2040|consen 588 EKDLCEITGFDS----FSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPA--------SAAMAG--MK 653 (1001)
T ss_pred HHHhheeecccc----eeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChh--------hHHhcC--CE
Confidence 388999999987 57899999854 444666664 2332 34445444554421 223444 58
Q ss_pred EEEcccCCCCCCCCHHHHHHHhhhcCC--cEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCC
Q 009673 226 SMPYRLDESTGLVDYDMLEKTAILFRP--KLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP 301 (529)
Q Consensus 226 ~v~~~v~~~~~~iD~d~le~~i~~~~p--klIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~ 301 (529)
+++++++ .+|.||+.+|++.+++++- .++.+.+|+.-+ ...+++++++.++||--|..|+|.--..+. . -.|
T Consensus 654 vvpV~~~-~~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVG--l-c~p 729 (1001)
T KOG2040|consen 654 VVPVGCD-ANGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVG--L-CRP 729 (1001)
T ss_pred EEEeecc-CCCCccHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceec--c-cCC
Confidence 8888887 5789999999999987543 456777765444 557999999999999999999875432221 1 122
Q ss_pred CC-cccEEEecccccccC------CCCeEEEeeCCCcchhHHHhhhcc--cccC----------CCCCCC-hHHHHHHHH
Q 009673 302 FK-YCDVVTTTTHKSLRG------PRGGMIFFKKDPVLGVELESAINN--AVFP----------GLQGGP-HNHTIGGLA 361 (529)
Q Consensus 302 ~~-~aDiv~~S~hK~l~G------prgG~i~~~~~~~~~~~l~~~i~~--~~~p----------~~~g~p-~~~~iaala 361 (529)
-+ ++|+.--.+||+|+= |..|-|.+++ .+...+-. .+.+ .....| ....|..+.
T Consensus 730 Gd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~------HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpIS 803 (1001)
T KOG2040|consen 730 GDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK------HLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPIS 803 (1001)
T ss_pred ccccccceeecccceeeecCCCCCCCCCccchhh------hccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhH
Confidence 22 789999999999843 3335565555 22222110 0000 001111 112233333
Q ss_pred HH-HHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec-C--CCCCceEEEccCCC----CCcHHHHHHhHhcCCeEEc
Q 009673 362 VC-LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-G--GSDNHLVLVDLRPM----GIDGARVEKILDMASITLN 433 (529)
Q Consensus 362 ~a-l~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~-~--gt~~~~~~v~~~~~----~i~~~~~~~~L~~~GI~v~ 433 (529)
.+ ++.+...+++.-.+-..-|+.++.++|+.. ++++. + +...|-+++|+++. |+...++.++|.++|+...
T Consensus 804 waYikmMG~~GL~~as~~AiLNaNYMakRLe~h-Ykil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaP 882 (1001)
T KOG2040|consen 804 WAYIKMMGSGGLKDASKIAILNANYMAKRLESH-YKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAP 882 (1001)
T ss_pred HHHHHHhcccccchhhHHHhhhhHHHHHHHhhc-cceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCC
Confidence 33 455555666666777888999999999875 44443 2 34567788998753 5777889999999999864
Q ss_pred CCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 009673 434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGS 490 (529)
Q Consensus 434 ~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~~~~~~~~ 490 (529)
..+.| .++.+-|-- |..-+.+|+++.++++ +++-.++.+...|.
T Consensus 883 TmswP------V~gtLMIEP----TESE~k~ElDRfcdAl---iSIreEI~~ie~G~ 926 (1001)
T KOG2040|consen 883 TMSWP------VAGTLMIEP----TESEDKAELDRFCDAL---ISIREEIAQIEEGR 926 (1001)
T ss_pred ccccc------cCCceEecc----CccccHHHHHHHHHHH---HHHHHHHHHHHccC
Confidence 33333 344454431 1223456666666655 45555554444343
No 322
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.33 E-value=8.2e-10 Score=117.83 Aligned_cols=329 Identities=14% Similarity=0.087 Sum_probs=169.8
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH---hhc
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT---AIL 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~---all 189 (529)
.-.|+|.+|+...+.+ ...-... ...++ ...+ ..+++.+.+...... .....+||++|+..++. ...
T Consensus 72 h~~p~v~~ai~~q~~~-~~~~~~~---~~~~~---~~~~-la~~l~~~~p~~~~~--~v~f~~sGseA~e~AlklAr~~t 141 (443)
T PRK06058 72 NSAPRVVEAVREQVAR-FTHTCFM---VTPYE---GYVA-VAEQLNRLTPGDHEK--RSALFNSGAEAVENAVKIARSYT 141 (443)
T ss_pred CCCHHHHHHHHHHHHh-ccCcccc---ccCCH---HHHH-HHHHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHhh
Confidence 4578999998877753 2110000 01111 1122 336677776432111 13456899999998887 333
Q ss_pred CCCCEEEEcCCCCCccccccccc-------cccccccccceEEEEEc--ccCC-CCCCCC--------HHHHHHHhhhcC
Q 009673 190 KPHDRIMGLDLPHGGHLSHGFMT-------PKRRVSGTSIYFESMPY--RLDE-STGLVD--------YDMLEKTAILFR 251 (529)
Q Consensus 190 ~pGD~Vl~~~~~~~g~~s~g~~~-------~~~~i~~~g~~~~~v~~--~v~~-~~~~iD--------~d~le~~i~~~~ 251 (529)
+ .++|+..+..|-|.-. +... ........-.....+++ +.+. .....+ .+.+++.+...+
T Consensus 142 g-r~~ii~~~~~yHG~t~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 219 (443)
T PRK06058 142 G-RQAVVVFDHAYHGRTN-LTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADN 219 (443)
T ss_pred C-CCeEEEECCCcCcChH-HHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCc
Confidence 3 3788888765433210 0000 00000000000111121 1110 001111 223334333235
Q ss_pred CcEEEEcCC-CCCC-CC----CHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccc-cCCCC
Q 009673 252 PKLIIAGAS-AYPR-DF----DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSL-RGPRG 321 (529)
Q Consensus 252 pklIi~~~s-~~p~-~~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l-~Gprg 321 (529)
+.+||+..- ..++ .. -+++|+++|++||+++|+|+++. |+.-.|.. . .-+. ..|+++.+ |.+ .|.+.
T Consensus 220 iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfgRtG~~fa~~~~gv~PDiv~~g--K~l~~G~Pi 296 (443)
T PRK06058 220 LAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQT-GFARTGAWFACEHEGIVPDLITTA--KGIAGGLPL 296 (443)
T ss_pred eEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcChhhhHHHhcCCCCCEEEEc--ccccCCCcc
Confidence 677777522 1222 22 38999999999999999999964 54222211 0 0011 35888775 998 45677
Q ss_pred eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEec
Q 009673 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS 399 (529)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~ 399 (529)
|++++++ ++.+.+......++.++.... .++..++|+.+.++ +..+++.+..++|.+.|++. .+.++.
T Consensus 297 ~av~~~~------~i~~~~~~~~~~~T~~gnpl~-~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~ 366 (443)
T PRK06058 297 SAVTGRA------EIMDAPHPGGLGGTYGGNPVA-CAAALAAIETIEED---DLVARARQIEALMTDRLRALAAEDDRIG 366 (443)
T ss_pred EEEEEcH------HHHhhccCCCCCCCCCCCHHH-HHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHhhCCcEE
Confidence 8888887 676666543333334443333 44434467665443 34566666677788887662 123221
Q ss_pred --CCCCCceEEEccCCC--CC-c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673 400 --GGSDNHLVLVDLRPM--GI-D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 471 (529)
Q Consensus 400 --~gt~~~~~~v~~~~~--~i-~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~ 471 (529)
.|. ..+..+.+... .. + ...+.+.|.+.||.+.. +. ++ ...||+..| ++ ++++|++++++
T Consensus 367 ~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~----~~--~~-~~~lr~~Pp-l~---~t~~~i~~~~~ 434 (443)
T PRK06058 367 DVRGR-GAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLT----CG--TY-GNVIRLLPP-LV---IGDELLREGLD 434 (443)
T ss_pred eeecc-ceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEec----cC--CC-CCEEEEECC-Cc---cCHHHHHHHHH
Confidence 121 22333333211 11 1 23355566789999843 21 11 257999644 33 67999999999
Q ss_pred HHHHHHH
Q 009673 472 FIHEGVE 478 (529)
Q Consensus 472 ~i~~~~~ 478 (529)
+|++++.
T Consensus 435 ~l~~~l~ 441 (443)
T PRK06058 435 VLEAALA 441 (443)
T ss_pred HHHHHHH
Confidence 9998875
No 323
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.33 E-value=5e-10 Score=126.15 Aligned_cols=274 Identities=13% Similarity=0.069 Sum_probs=170.5
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh-c--CCCCEEEEcCCCCCccccccccccccccccccceEEEEE
Q 009673 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI-L--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (529)
Q Consensus 153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~al-l--~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~ 228 (529)
.+..+++++|++.. |.....++ .+..+++++. . +++++|++++..|+...... .+ .....| ++++.
T Consensus 114 ~Qt~i~eLtGm~~a----NaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~---~t-~a~~~g--~~v~~ 183 (939)
T TIGR00461 114 FQTVVSDLTGLPVA----NASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVL---HT-RAKPFG--IEVIV 183 (939)
T ss_pred HHHHHHHHHCCChh----hhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHH---HH-HHHhcC--cEEEE
Confidence 45889999999974 33334443 3333444453 2 34589999887765432110 00 112223 35544
Q ss_pred cccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-ccc
Q 009673 229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 306 (529)
Q Consensus 229 ~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aD 306 (529)
+ |+++|++.+ ++..+++.+|++-+ ..|+++|.++++++|++++++.-..+. .....|-+ ++|
T Consensus 184 ~---------~~~~l~~~~---~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al----~ll~~Pge~GaD 247 (939)
T TIGR00461 184 V---------DCSDIKKAV---DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMAL----TLLTPPGHYGAD 247 (939)
T ss_pred E---------cHHHHhhcC---CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHh----CCcCCHHHcCCc
Confidence 3 445566555 35677777777665 669999999999999999997543222 22233433 799
Q ss_pred EEEecccccc-----cCCCCeEEEeeCCCcchhHHHhhhc---------cc---ccCC-C----------CCCC---hHH
Q 009673 307 VVTTTTHKSL-----RGPRGGMIFFKKDPVLGVELESAIN---------NA---VFPG-L----------QGGP---HNH 355 (529)
Q Consensus 307 iv~~S~hK~l-----~GprgG~i~~~~~~~~~~~l~~~i~---------~~---~~p~-~----------~g~p---~~~ 355 (529)
|++++.+++. +||..|++.++++ +...+- .. .+.. + -++. ...
T Consensus 248 i~vg~~q~fg~p~g~GGP~aG~~a~~~~------l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~q 321 (939)
T TIGR00461 248 IVLGSSQRFGVPMGYGGPHAAFFAVKDE------YNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQ 321 (939)
T ss_pred EEeeCCCccCCCCCCCCCceeeeeecHh------hHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHH
Confidence 9988877763 5888899999884 222210 00 0000 0 1121 122
Q ss_pred HHHHHHHH--HHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEc
Q 009673 356 TIGGLAVC--LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 433 (529)
Q Consensus 356 ~iaala~a--l~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~ 433 (529)
.+.|+.++ +..+...++++..+++..++.+|.+.|.+.|+++..+ .--..+.+++. ..+.+++.+.|.+.||.++
T Consensus 322 aL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~-~fF~~~~v~~~--~~~~~~i~~~~~~~gi~l~ 398 (939)
T TIGR00461 322 VLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINK-TWFDTLTVKVG--NGISSELLKAAEEFNINLR 398 (939)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-CccceEEEEeC--CCCHHHHHHHHHHCCCeee
Confidence 33333333 3445556778889999999999999999999998764 11112344442 1346778888999999975
Q ss_pred CCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673 434 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 474 (529)
Q Consensus 434 ~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~ 474 (529)
.. ..+.+++++...+| ++|++.+++.+.
T Consensus 399 ~~---------~~~~i~~s~~E~~t----~~di~~l~~~~~ 426 (939)
T TIGR00461 399 AV---------DTTTVGIALDETTT----KADVENLLKVFD 426 (939)
T ss_pred ec---------CCCEEEEEeecCCC----HHHHHHHHHHhc
Confidence 41 23579999887765 799999999995
No 324
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.33 E-value=1.5e-09 Score=115.11 Aligned_cols=326 Identities=14% Similarity=0.068 Sum_probs=166.2
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhh-c-
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAI-L- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs~A~~~~l~al-l- 189 (529)
.-.|+|.+|+...+......++. ...++ .. .+++ +++.+++.-. .+ .....+|||+|+..++... .
T Consensus 49 h~~p~v~~a~~~ql~~~~~~~~~----~~~~~--~~-~~la-~~l~~~~p~~~~~---~v~f~~sGseA~e~AlklAr~~ 117 (420)
T TIGR00700 49 HSHPRVVDAVRTQVAEFTHTCFM----VTPYE--GY-VALA-EKLNRIAPGSGPK---KSVFFNSGAEAVENAVKIARSY 117 (420)
T ss_pred CCCHHHHHHHHHHHHhccCcccc----ccCCh--HH-HHHH-HHHHHhCCCCCCC---EEEEeCCcHHHHHHHHHHHHHh
Confidence 44788999988777532111110 01111 12 2233 5566665321 12 2355689999999887633 2
Q ss_pred CCCCEEEEcCCCCCccccccccc-------cccccc--cccceEEEEEcccCCCC--------CCCCHHHHHHHhh----
Q 009673 190 KPHDRIMGLDLPHGGHLSHGFMT-------PKRRVS--GTSIYFESMPYRLDEST--------GLVDYDMLEKTAI---- 248 (529)
Q Consensus 190 ~pGD~Vl~~~~~~~g~~s~g~~~-------~~~~i~--~~g~~~~~v~~~v~~~~--------~~iD~d~le~~i~---- 248 (529)
....+|+...-.|-|.- .+... ...... ..+ +..++++..... ..-+++.+++.+.
T Consensus 118 tgr~~ii~~~~~yHG~t-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (420)
T TIGR00700 118 TGRPGVVAFDHGFHGRT-NMTMALTAKVMPYKSGFGPFAPE--VYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVG 194 (420)
T ss_pred cCCCcEEEECCCcCCCc-HHHHHhcCCCcccccCCCCCCCC--cEEeCCCccccccccccchhHHHHHHHHHHHHHhhcC
Confidence 22346777665432221 00000 000000 001 111222210000 0012456666653
Q ss_pred hcCCcEEEEcCC--CCCC----CCCHHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEecccccc-cC
Q 009673 249 LFRPKLIIAGAS--AYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RG 318 (529)
Q Consensus 249 ~~~pklIi~~~s--~~p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l-~G 318 (529)
..+..+||+..- +.+. ...+++|+++|++||+++|+|+++ .|+...+... .... ..|+++ ++|.+ +|
T Consensus 195 ~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~-tg~gr~g~~~a~~~~~~~pDi~~--lsK~l~~G 271 (420)
T TIGR00700 195 ANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQ-TGFARTGAMFACEHEGPEPDLIT--TAKSLADG 271 (420)
T ss_pred CCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecc-cCCcccchhHHHhhcCCCCCEEE--eeccccCC
Confidence 124456776521 1111 223899999999999999999984 4553333110 0111 357765 67998 57
Q ss_pred CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cC
Q 009673 319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LG 394 (529)
Q Consensus 319 prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G 394 (529)
++.|++++++ ++.+.+.......+.++......+++ ++++.+....+. +++.+..+.+.+.|++ .+
T Consensus 272 ~pig~v~~~~------~i~~~~~~~~~~~T~~~~pl~~aaa~-a~l~~l~~~~~~---~~~~~~g~~l~~~L~~l~~~~~ 341 (420)
T TIGR00700 272 LPLSGVTGRA------EIMDAPAPGGLGGTYAGNPLACAAAL-AVLAIIESEGLI---ERARQIGRLVTDRLTTLKAVDP 341 (420)
T ss_pred cceEEEEecH------HHHhhcCCCCcCCCCCcCHHHHHHHH-HHHHHHHhccHH---HHHHHHHHHHHHHHHHHHhhCC
Confidence 8889999987 67776654333333444444444443 356655444443 3344444445555544 22
Q ss_pred -cEEecCCCCCceEEEccCCC--CC-c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673 395 -YKLVSGGSDNHLVLVDLRPM--GI-D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 467 (529)
Q Consensus 395 -~~v~~~gt~~~~~~v~~~~~--~i-~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~ 467 (529)
+..+.+ . ..+.++.+... .. + ...+.+.+.+.||.+ .|+.. + ...|||+.+.. +++++++
T Consensus 342 ~~~~vrg-~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i----~p~~~--f-~~~lRl~p~l~----~~~~~l~ 408 (420)
T TIGR00700 342 RIGDVRG-L-GAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLL----LTCGM--F-GNIIRFLPPLT----IGDELLS 408 (420)
T ss_pred CEEEeec-c-ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEE----eccCC--C-CCEEEEECCCC----cCHHHHH
Confidence 222222 2 23444444211 01 1 233555567899998 34321 1 36899986532 4589999
Q ss_pred HHHHHHHHHHH
Q 009673 468 AIADFIHEGVE 478 (529)
Q Consensus 468 ~la~~i~~~~~ 478 (529)
+.++.|.+++.
T Consensus 409 ~~~~~l~~~l~ 419 (420)
T TIGR00700 409 EGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHhh
Confidence 99999988763
No 325
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.32 E-value=1.7e-10 Score=117.49 Aligned_cols=269 Identities=15% Similarity=0.218 Sum_probs=176.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh---cCC--C---CEEEEcCCCCCcccccccccccccc
Q 009673 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---LKP--H---DRIMGLDLPHGGHLSHGFMTPKRRV 217 (529)
Q Consensus 146 ~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al---l~p--G---D~Vl~~~~~~~g~~s~g~~~~~~~i 217 (529)
..++|..+.+.++.+|+.+.+..+. ..+.||++..++.... ... | -.++++...|.+. .+..
T Consensus 118 ~~~~e~~~Vnm~~~L~~~~~~~~g~--~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~--------eK~a 187 (491)
T KOG1383|consen 118 VRKLEAECVNMIANLFNAPSDSCGC--GTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAF--------EKAA 187 (491)
T ss_pred hHHHHHHHHHHHHHHhcCCccccCc--cccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHH--------HHHH
Confidence 4588999999999999999775543 2344457755444332 111 1 1233333222111 1112
Q ss_pred ccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHH-hCCEEEEeccccccccc
Q 009673 218 SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADA-VGALLMMDMAHISGLVA 294 (529)
Q Consensus 218 ~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~-~g~~livD~ah~~Gli~ 294 (529)
...+. +...+++++.++.+|+.++.+.+.+ ++.+++...++.|. ..|+++|.+++-+ +++++++|++- -|++.
T Consensus 188 ~yf~v--~l~~V~~~~~~~~~D~~k~~~~i~e-Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~-GgFi~ 263 (491)
T KOG1383|consen 188 RYFEV--ELREVPLDEGDYRVDPGKVVRMIDE-NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACL-GGFIN 263 (491)
T ss_pred hhEEE--EEEeeeccccceEecHHHHHHHhcc-ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccC-ccccc
Confidence 22233 4456667777899999999999998 88888888787775 7789999999988 99999999873 34443
Q ss_pred c-cccC-CCCC----cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh--cccc------cCCCCCCChHHHHHH
Q 009673 295 A-SVVA-DPFK----YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI--NNAV------FPGLQGGPHNHTIGG 359 (529)
Q Consensus 295 ~-~~~~-~~~~----~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i--~~~~------~p~~~g~p~~~~iaa 359 (529)
. +... .+++ +..-++.++||.-..|.| |+++.+.+. .+...+ .... .|.+-|+-...++++
T Consensus 264 p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~----~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~ 339 (491)
T KOG1383|consen 264 PAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKE----LLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAA 339 (491)
T ss_pred cccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccc----cccceEEEeccccCccccCcccccCCcccHHHH
Confidence 2 2221 2332 556788899998556777 888887752 111111 1111 222333334456777
Q ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCC
Q 009673 360 LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKN 435 (529)
Q Consensus 360 la~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~ 435 (529)
.+++|-.+..++|.+..+++.++++.|.+.+++ .++.++.. .-..++.+.....+-.++...|.+.|..++.-
T Consensus 340 ~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk---p~vs~~~~~s~~~~i~elsd~l~~~GW~lnal 413 (491)
T KOG1383|consen 340 QWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGK---PLVSFILFGSNDVNIFELSDLLRKKGWILNAL 413 (491)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC---CcEEEEEccCCccchhhhhHHHHhcCcCcccc
Confidence 777777777788999999999999999999998 67888764 22233334444456677889999999988653
No 326
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.32 E-value=3.5e-09 Score=112.32 Aligned_cols=320 Identities=13% Similarity=0.118 Sum_probs=167.6
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCC
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 191 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~p 191 (529)
.-.|.|.+|+...+.+....+ + .++ ..+| + .+++.++++...+. ....+||++|+..++... .-.
T Consensus 69 h~~p~v~~ai~~q~~~~~~~~------~-~~~--~~~~-l-a~~L~~~~~~~~~~---v~f~~SGsEA~e~AiklAr~~t 134 (433)
T PRK00615 69 HSHPKICDAIQQGAERGTSYG------L-TSE--QEIL-F-AEELFSYLGLEDHK---IRFVSSGTEATMTAVRLARGIT 134 (433)
T ss_pred CCCHHHHHHHHHHHHhCCCCC------C-CCH--HHHH-H-HHHHHHhCCCCcCE---EEEeCchHHHHHHHHHHHHHhh
Confidence 357899999887775422111 1 112 1222 2 36677777543221 245689999999888643 223
Q ss_pred C-CEEEEcCCCCCccccccccccccccccccceEEE--EEc---ccCCCC---CCCCHHHHHHHhhhc--CCcEEEEcC-
Q 009673 192 H-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES--MPY---RLDEST---GLVDYDMLEKTAILF--RPKLIIAGA- 259 (529)
Q Consensus 192 G-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~--v~~---~v~~~~---~~iD~d~le~~i~~~--~pklIi~~~- 259 (529)
| .+|+...-.|-|+-. +. . ..++..+..... ..+ +..+.. ..-|++++++.+..+ +..+||+..
T Consensus 135 gr~~ii~~~~~yHG~td-~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv 210 (433)
T PRK00615 135 GRSIIIKFLGCYHGHAD-TL-L--QGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPI 210 (433)
T ss_pred CCCEEEEEcCccCCCCc-cc-C--cccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCC
Confidence 4 467766644322210 00 0 011111100000 000 000000 123788898888643 345666652
Q ss_pred -CCCCCCCC----HHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEeccccccc-CCCCeEEEeeCCC
Q 009673 260 -SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDP 330 (529)
Q Consensus 260 -s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l~-GprgG~i~~~~~~ 330 (529)
++.+...+ +++|+++|++||+++|+|++| .|+ -.+.. ..-+. ..|+++ +.|.++ |..+|++++++
T Consensus 211 ~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~-tG~-R~G~~ga~~~~gv~PDi~~--~gK~lggG~p~~av~~~~-- 284 (433)
T PRK00615 211 CANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVV-TGF-RVAQGGAAAIYHVKPDITV--YGKILGGGLPAAAVVAHK-- 284 (433)
T ss_pred CCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccc-ccc-cccHhHHHHhcCCCCCeEE--EcccccCCcceeeeeecH--
Confidence 22222333 679999999999999999998 465 12210 01111 368876 579996 45678999988
Q ss_pred cchhHHHhhhccc--ccC-CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCcEEecCCCC
Q 009673 331 VLGVELESAINNA--VFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSD 403 (529)
Q Consensus 331 ~~~~~l~~~i~~~--~~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~~v~~~gt~ 403 (529)
++.+.+... .+. ++.++ +...+++..++|+.+.+.. ..+++.++.++|.+.|++ .|+++...+ .
T Consensus 285 ----~i~~~~~~~~~~~~~~T~~g-~p~~~aa~la~L~~i~~~~---~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~ 355 (433)
T PRK00615 285 ----SIMDHLAPEGTIFQAGTLSG-NPLAMAAGKASINLCREQG---FYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-Y 355 (433)
T ss_pred ----HHHhhhcCCCCcccCCCCcc-cHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-e
Confidence 676665421 111 22233 3333444444677665433 355666666667555544 466532211 1
Q ss_pred CceEEEccCCCC---C------c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673 404 NHLVLVDLRPMG---I------D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 471 (529)
Q Consensus 404 ~~~~~v~~~~~~---i------~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~ 471 (529)
.-+.-+.+.... + + ...+.+.|.++||.+.....| ...+ +..++++|++++++
T Consensus 356 G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~-------~~~l--------s~~ht~~did~~~~ 420 (433)
T PRK00615 356 GSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFE-------ASFL--------SSAHSMENLDYAQN 420 (433)
T ss_pred ceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCcccc-------ccce--------ecCCCHHHHHHHHH
Confidence 122222232110 0 1 124667777899998532111 1112 22367999999999
Q ss_pred HHHHHHHHH
Q 009673 472 FIHEGVEIT 480 (529)
Q Consensus 472 ~i~~~~~~~ 480 (529)
++.+++.+.
T Consensus 421 a~~~~~~~~ 429 (433)
T PRK00615 421 VLIDSLEKV 429 (433)
T ss_pred HHHHHHHHH
Confidence 999998764
No 327
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.31 E-value=2.6e-10 Score=112.41 Aligned_cols=308 Identities=18% Similarity=0.196 Sum_probs=185.8
Q ss_pred HHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCC--CCccccccccccccccccccceEEEEEcccC
Q 009673 155 KRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP--HGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (529)
Q Consensus 155 ~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~--~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~ 232 (529)
+..++.||.+. .+-.+-|-.|-...+..++++|+.+...... ...|+... +..+...|. .++.+.++
T Consensus 86 ~avkdifGfq~-----~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTT----r~h~~~ng~--~~~n~~~~ 154 (471)
T COG3033 86 DAVKDIFGFQY-----TIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTT----RGHIQINGA--TPRNVYVD 154 (471)
T ss_pred HHHHHhcCcee-----eeeccCCccHHHHHHHHHhhhccccCCccccccccceecch----hHHHHhcCC--cccccccc
Confidence 55678899765 2334556667776777777777665441111 12222211 112222333 22222222
Q ss_pred C---------CCCCCCHHHHHHHhhhcC---CcEEEEcCCCCC---C---CCCHHHHHHHHHHhCCEEEEeccccccccc
Q 009673 233 E---------STGLVDYDMLEKTAILFR---PKLIIAGASAYP---R---DFDYPRMRQIADAVGALLMMDMAHISGLVA 294 (529)
Q Consensus 233 ~---------~~~~iD~d~le~~i~~~~---pklIi~~~s~~p---~---~~d~~~i~~ia~~~g~~livD~ah~~Gli~ 294 (529)
+ =.|.+|++.|++.|++.. .-.|++.-++|+ . ..+++++.+||++|+++++.|++..+.-.+
T Consensus 155 ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaY 234 (471)
T COG3033 155 EAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAY 234 (471)
T ss_pred ccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhh
Confidence 1 136899999999998743 345555433333 2 457899999999999999999875433211
Q ss_pred c------cccCCC--------CCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhc-----ccccCCCCCCChHH
Q 009673 295 A------SVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN-----NAVFPGLQGGPHNH 355 (529)
Q Consensus 295 ~------~~~~~~--------~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~-----~~~~p~~~g~p~~~ 355 (529)
. +..... +.|+|-++.|.-|--..+-||++..+++- ..++....+ .--+|. .|+..--
T Consensus 235 FIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmGGfl~~~D~~--~fDvy~~~~~~~V~~eG~~t-YGgl~Gr 311 (471)
T COG3033 235 FIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMGGFLCFKDDS--FFDVYEECRTLVVVQEGFPT-YGGLAGR 311 (471)
T ss_pred hhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccccEEEecCcc--HHHHHHHHHhheEeeccccc-cCcccch
Confidence 1 111122 23799999999996446788999999851 012222221 112332 3444455
Q ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCC-------CCCcHHHH-HHhHhc
Q 009673 356 TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP-------MGIDGARV-EKILDM 427 (529)
Q Consensus 356 ~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~-------~~i~~~~~-~~~L~~ 427 (529)
.+.++|+.|.+.... .|.++.++..++|.+.|.+.|++++.+. ..|-+++|... ....++.+ .++..+
T Consensus 312 dmealAvGL~e~~~~---~yl~~Rv~Qv~YL~~~l~~~GVpi~~pa-GGHavfvda~~~lphip~eqFpaqala~ely~e 387 (471)
T COG3033 312 DMEALAVGLREGVNF---DYLAHRVAQVQYLADGLEEAGVPIVQPA-GGHAVFVDAGKFLPHIPAEQFPAQALACELYKE 387 (471)
T ss_pred hHHHHHHHHHHhcCc---HHHHHHHHHHHHHHHHHHhcCCeeEecC-CCceEEeehhhhcCCCChhhCcHHHHHHHHHHH
Confidence 788888889877654 4566667778999999999999887652 35888887531 11223433 455578
Q ss_pred CCeEEcC-CC--CCCCC--C---CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 009673 428 ASITLNK-NS--VPGDK--S---ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEA 483 (529)
Q Consensus 428 ~GI~v~~-~~--~Pg~~--~---~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~ 483 (529)
.||...- +. .+.+. + +-...-+|+.+|- +-.+.+.|+.+++.++++.++..++
T Consensus 388 ~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipR---rtYt~~HmD~V~~a~~~l~e~~~~i 448 (471)
T COG3033 388 AGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPR---RTYTQTHMDFVIEAFKALKENAEDI 448 (471)
T ss_pred hCeeeeeeeceecccCCCccccCCCchheeeEeccc---cccchhHHHHHHHHHHHHHhccccC
Confidence 9997642 21 12221 1 1112469998764 4478999999999999988876443
No 328
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.29 E-value=4.5e-09 Score=111.63 Aligned_cols=332 Identities=15% Similarity=0.114 Sum_probs=167.9
Q ss_pred CCcHHHHHHHhhhhhc-cCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC--CCCCceeeecCChHHHHHHHHHhh-
Q 009673 113 FTSRAVMEAVGSCLTN-KYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGSPANFEVYTAI- 188 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~-~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~--~~~~~~~V~~~sGs~A~~~~l~al- 188 (529)
.-+|.|.+|+...+.. .+..+. .+. ++ ...+++ +++.+.+..+ .+. .+.+..+||++|+..++...
T Consensus 55 h~~p~v~~ai~~ql~~~~~~~~~----~~~-~~---~~~~la-e~l~~~~~~~~~~~~-~~~f~~~sGseA~e~AlklAr 124 (425)
T PRK09264 55 HNNPVLKQALIDYLQRDGITHGL----DMH-TT---AKREFL-ETFEETILKPRGLDY-KVQFTGPTGTNAVEAALKLAR 124 (425)
T ss_pred CCCHHHHHHHHHHHHhccccccc----ccC-cH---HHHHHH-HHHHHhhcCCcCCCc-eEEEeCCCHHHHHHHHHHHHH
Confidence 3478888888877653 121111 011 11 112222 5555554222 110 02222369999999887643
Q ss_pred cCCC-CEEEEcCCCCCcc-ccc----cccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEE
Q 009673 189 LKPH-DRIMGLDLPHGGH-LSH----GFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIA 257 (529)
Q Consensus 189 l~pG-D~Vl~~~~~~~g~-~s~----g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pklIi~ 257 (529)
.-+| .+|+...-.|-|. ... +....+.........+..++++.......-|++++++.+... ++.+||+
T Consensus 125 ~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~ 204 (425)
T PRK09264 125 KVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIV 204 (425)
T ss_pred HhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEE
Confidence 2233 5677776543222 100 000000000000001122333210000013678888888642 2456666
Q ss_pred cC--CCCCC----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEeccccccc--CCCCeEEEe
Q 009673 258 GA--SAYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR--GPRGGMIFF 326 (529)
Q Consensus 258 ~~--s~~p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~--GprgG~i~~ 326 (529)
.. .+.+. ...+++|+++|++||+++|+|++|. |+.-.|.. . .... ..|++++ .|.++ |.+.|++++
T Consensus 205 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~~~~~~~v~PDi~t~--~K~l~~~G~pigav~~ 281 (425)
T PRK09264 205 ETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA-GCGRTGTFFSFERAGITPDIVTL--SKSISGYGLPMALVLI 281 (425)
T ss_pred ecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh-CCccccHHHHHhhcCCCCCEEEe--ccccCCCccceEEEEE
Confidence 52 22221 2358999999999999999999975 43211110 0 0011 3577765 59984 455689998
Q ss_pred eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEE-ec--CC
Q 009673 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKL-VS--GG 401 (529)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v-~~--~g 401 (529)
++ ++. .+.........++... ..++..++++++... .++.+++.++.++|.+.|++. .+.. .. .+
T Consensus 282 ~~------~i~-~~~~~~~~~T~~gnp~-~~aaa~a~l~~~~~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg 351 (425)
T PRK09264 282 KP------ELD-VWKPGEHNGTFRGNNL-AFVTATAALEEYWSD--DAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRG 351 (425)
T ss_pred ch------hhh-ccCCCccCCCCCCCHH-HHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHHhCCCceeccee
Confidence 87 442 3322222222333222 333332355332211 245666777777777777552 2221 11 11
Q ss_pred CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 402 SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 402 t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
...+.++.+... .....+.+.|.+.||.+... . .....||++.+.. ++++|++++++.|.+++...
T Consensus 352 -~Gl~~~i~l~~~-~~~~~l~~~~~~~Gv~~~~~----~---~~~~~lr~~p~l~----~t~~ei~~~~~~l~~~l~~~ 417 (425)
T PRK09264 352 -RGMMQGIDFGDG-ELAGKIAAEAFENGLIIETS----G---PEDEVVKLLPPLT----IDEEELEEGLDILEEAVAEV 417 (425)
T ss_pred -cccEEEEEecCh-HHHHHHHHHHHHCCCEEecc----C---CCCCEEEEeCCCC----CCHHHHHHHHHHHHHHHHHH
Confidence 223445555421 12346777788899998431 1 1236799975533 55899999999999998754
No 329
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.29 E-value=4.8e-09 Score=109.60 Aligned_cols=328 Identities=19% Similarity=0.106 Sum_probs=174.9
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhh--cC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAI--LK 190 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs~A~~~~l~al--l~ 190 (529)
-+|.|++|+...+..-. ....++......++ . .+++.+.+-.+ .+ .....+||++||.+++... ..
T Consensus 73 ~hP~Vv~Av~~q~~~~~---h~~~~~~~~e~~v~----~-ae~L~~~~p~~~~~---~~~f~~sGaeA~E~AiKiAr~~T 141 (447)
T COG0160 73 NHPRVVEAVKRQLAKLN---HTHTRDLYYEPYVE----L-AEKLTALAPGSGLK---KVFFGNSGAEAVEAAIKIARAYT 141 (447)
T ss_pred CCHHHHHHHHHHHHHhh---cccCCcccchhHHH----H-HHHHHHhCCcccCC---eEEecCCcHHHHHHHHHHHHHHh
Confidence 47999999987664221 11112221111122 2 24555655542 22 3456789999999988643 22
Q ss_pred CCCEEEEcCCCCCcccccccc--ccccccc-----cccceEEEEEcccCCCC-CC--------CCHHHHHHHhhh-----
Q 009673 191 PHDRIMGLDLPHGGHLSHGFM--TPKRRVS-----GTSIYFESMPYRLDEST-GL--------VDYDMLEKTAIL----- 249 (529)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~g~~--~~~~~i~-----~~g~~~~~v~~~v~~~~-~~--------iD~d~le~~i~~----- 249 (529)
-...|+..+-.|-|. |++.. +..+... -....+..++||..... +. -..+.++..+..
T Consensus 142 gr~~viaf~~afHG~-T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~ 220 (447)
T COG0160 142 GRPGVIAFDGAFHGR-TLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGP 220 (447)
T ss_pred CCCcEEEECCccccc-chhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCC
Confidence 345677766553222 11100 0000000 00011233444421111 11 123345554432
Q ss_pred cCCcEEEEcCC-CCCC-C----CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC----cccEEEeccccccc-C
Q 009673 250 FRPKLIIAGAS-AYPR-D----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSLR-G 318 (529)
Q Consensus 250 ~~pklIi~~~s-~~p~-~----~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~aDiv~~S~hK~l~-G 318 (529)
.++.+||+..- ..++ . .-+++++++|++||+++|+|+.|. |+--.|. -..++ ..|+++++ |.+. |
T Consensus 221 ~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQt-G~GRTG~-~fa~E~~gv~PDivt~a--K~ig~G 296 (447)
T COG0160 221 EEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQT-GFGRTGK-MFAFEHFGVEPDIVTLA--KSLGGG 296 (447)
T ss_pred CceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcccc-chhhhhcCCCCCEEEec--ccccCC
Confidence 23567777521 1222 1 237899999999999999999974 4322221 11122 36899876 9984 4
Q ss_pred CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcE
Q 009673 319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYK 396 (529)
Q Consensus 319 prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~ 396 (529)
...|.+++++ ++.+ .......++.++......+|++ .|+.+..+ ...++..+.-++|.+.|.+ ..++
T Consensus 297 ~Pl~avv~r~------ei~~-~~~g~~~~Tf~GNpva~Aaa~A-vL~vie~e---~L~~~a~~~G~~l~~~L~~l~~~~~ 365 (447)
T COG0160 297 LPLSAVVGRA------EIMD-WPPGGHGGTFGGNPVACAAALA-VLDVIEEE---NLLERAAELGEYLRDRLEELQEKHP 365 (447)
T ss_pred CceeEEeccH------Hhcc-cCCcccCCCCCcCHHHHHHHHH-HHHHHHHc---cHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 5568888887 5555 3333344445564444444444 56655433 4566666677778887765 2344
Q ss_pred EecCCC-CCceEEEccCCC----CCc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHH
Q 009673 397 LVSGGS-DNHLVLVDLRPM----GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVA 468 (529)
Q Consensus 397 v~~~gt-~~~~~~v~~~~~----~i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~ 468 (529)
++.+-. ..-+.-+.+... .-+ .+.+...+.+.|+.+..+ | ...+.|||--| +| ++++++++
T Consensus 366 ~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~---G----~~~nviRi~PP-L~---is~e~~d~ 434 (447)
T COG0160 366 LIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTC---G----PHGNVLRILPP-LT---ISDEELDE 434 (447)
T ss_pred ceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEecc---C----CCCcEEEEeCC-cc---cCHHHHHH
Confidence 444311 112232333211 112 244667777899877432 1 12467999754 55 77999999
Q ss_pred HHHHHHHHHHH
Q 009673 469 IADFIHEGVEI 479 (529)
Q Consensus 469 la~~i~~~~~~ 479 (529)
..++|.+++..
T Consensus 435 ~l~il~~al~~ 445 (447)
T COG0160 435 GLDILEEALKE 445 (447)
T ss_pred HHHHHHHHHHh
Confidence 99999998864
No 330
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.28 E-value=2.6e-09 Score=113.87 Aligned_cols=323 Identities=15% Similarity=0.091 Sum_probs=167.6
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCCC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~pG 192 (529)
-.|.|.+|+...+.. +.. ....++ .++... ...+++.+++.....+ .....+||++|+..++... .-.|
T Consensus 59 ~~p~v~~Ai~~ql~~-~~~--~~~~~~-~~~~~~----~lae~L~~~~p~~~~~--~v~f~~SGseA~e~AiklAr~~tg 128 (445)
T PRK08593 59 APPRVVEAIKAQADK-FIH--YTPAYM-YHEPLV----RLAKKLCELAPGDFEK--RVTFGLSGSDANDGIIKFARAYTG 128 (445)
T ss_pred CCHHHHHHHHHHHHh-ccC--cccccc-CCHHHH----HHHHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHhhC
Confidence 478888888877643 211 110111 122222 2336677776432101 1244589999999888742 1123
Q ss_pred -CEEEEcCCCCCcccccccccccccccccc-------------ceEEEEEcccCCC--CCCCC-------HHHHHHHhhh
Q 009673 193 -DRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYRLDES--TGLVD-------YDMLEKTAIL 249 (529)
Q Consensus 193 -D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g-------------~~~~~v~~~v~~~--~~~iD-------~d~le~~i~~ 249 (529)
.+|+..+-.|-|.. .+ .++..+ ..+..++++-... ....+ ++++++.+..
T Consensus 129 r~~ii~~~~~YHG~t-~~------als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (445)
T PRK08593 129 RPYIISFTNAYHGST-YG------SLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEK 201 (445)
T ss_pred CCeEEEECCCcCCCc-HH------HHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHh
Confidence 46777665432221 01 011111 0012223221000 00111 2445444432
Q ss_pred ----cCCcEEEEcCC-CCCC-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEecccccc
Q 009673 250 ----FRPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSL 316 (529)
Q Consensus 250 ----~~pklIi~~~s-~~p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l 316 (529)
.+..+||+... ..++ ..+ +++|+++|++||+++|+|++|. |+-..|.. ..-+. ..|+++ +.|.+
T Consensus 202 ~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~t-g~GrtG~~~a~~~~gv~pDi~t--~gK~l 278 (445)
T PRK08593 202 YLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQ-GLGRTGKWSSISHFNITPDLMS--FGKSL 278 (445)
T ss_pred hcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCchHHHHHhcCCCCCEee--ecccc
Confidence 24567777632 1222 333 8999999999999999999963 33112211 00011 257775 56998
Q ss_pred c-CCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--
Q 009673 317 R-GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-- 393 (529)
Q Consensus 317 ~-GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-- 393 (529)
+ |.++|++++++ ++.+.++.....++.+++.. ..++..++++.+.++ +..+++.++.++|.+.|++.
T Consensus 279 ~~G~p~gav~~~~------~i~~~~~~~~~~~T~~~~pl-~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~ 348 (445)
T PRK08593 279 AGGMPMSAIVGRK------EIMESLEAPAHLFTTGANPV-SCAAALATIDMIEDE---SLLQRSAEKGEYARKRFDQWVS 348 (445)
T ss_pred cCCcccEEEEEcH------HHHhhhccCCCCCCCCCCHH-HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHh
Confidence 5 56789999987 67766643222223334333 344434467665433 34566667777777777652
Q ss_pred CcEEecC--CCCCceEEEccCCC---CC-c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHH
Q 009673 394 GYKLVSG--GSDNHLVLVDLRPM---GI-D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK 464 (529)
Q Consensus 394 G~~v~~~--gt~~~~~~v~~~~~---~i-~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~ 464 (529)
.+.++.. |. ..+.-+.+... .. + ...+...|.+.||.+... ....+|+..+.. ++++
T Consensus 349 ~~~~v~~vrG~-Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~---------~~~~lr~~p~l~----~t~~ 414 (445)
T PRK08593 349 KYNFVGDVRGY-GLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAV---------AGNVLRFQPPLV----ITYE 414 (445)
T ss_pred cCCcEEEEecc-ceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEecc---------CCCEEEEECCCc----cCHH
Confidence 2222221 11 11222222110 00 1 234667777899998421 135799976543 6799
Q ss_pred HHHHHHHHHHHHHHHH
Q 009673 465 EFVAIADFIHEGVEIT 480 (529)
Q Consensus 465 d~~~la~~i~~~~~~~ 480 (529)
|++++.+.+.+++...
T Consensus 415 ~id~~~~~l~~~l~~~ 430 (445)
T PRK08593 415 QLDTALNTIEQAFTAL 430 (445)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998754
No 331
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.28 E-value=7.8e-10 Score=114.85 Aligned_cols=278 Identities=18% Similarity=0.169 Sum_probs=139.6
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH----HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEE
Q 009673 153 CQKRALAAFNLDENKWGVNVQPLSGS----PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (529)
Q Consensus 153 a~~~la~~~g~~~~~~~~~V~~~sGs----~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~ 228 (529)
-+..+++++|.+. +|.....|+ +|..+++..--+..++|+++.-.|+.+.. ... ....+..++++.
T Consensus 115 ~Qs~i~eLTGmdv----aNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~-v~~-----t~a~~~g~~iv~ 184 (429)
T PF02347_consen 115 YQSMICELTGMDV----ANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRA-VLR-----TYAAPLGIEIVE 184 (429)
T ss_dssp HHHHHHHHHTSSE----E-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHH-HHH-----HHCCHCCEEEEE
T ss_pred HHHHHHHhhCCCc----cCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHH-HHH-----HhhhhCCeEEEE
Confidence 3588999999996 344444443 33333333333445699999877655432 000 112234467888
Q ss_pred cccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-ccc
Q 009673 229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 306 (529)
Q Consensus 229 ~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aD 306 (529)
++.+ +++..| .+ ++..|++.+||+-+ ..|+++|.++++++|+++++ .+. ....+....|-+ ++|
T Consensus 185 ~~~~-~~~~~d--------~~-~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~ad---~~aL~~l~~Pge~GAD 250 (429)
T PF02347_consen 185 VPLD-EDGTTD--------DD-DTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GAD---PNALGGLKSPGEYGAD 250 (429)
T ss_dssp E-BB-TTCSB---------ST-TEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEE-CGG---CCGCCTC--GGGGT-S
T ss_pred eccc-ccCCcc--------cc-CeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ecC---HHHHhCcCChhhcCcc
Confidence 7776 345555 33 78889999888766 66899999999999999887 442 233333344544 899
Q ss_pred EEEecccccc------cCCCCeEEEeeCCCc----------------------chhHHHhhhccc-ccCCCCCCChHHHH
Q 009673 307 VVTTTTHKSL------RGPRGGMIFFKKDPV----------------------LGVELESAINNA-VFPGLQGGPHNHTI 357 (529)
Q Consensus 307 iv~~S~hK~l------~GprgG~i~~~~~~~----------------------~~~~l~~~i~~~-~~p~~~g~p~~~~i 357 (529)
|++++ ||+| +||..|++.+++... .+..-.+.|++- ....+ ++ +..+
T Consensus 251 I~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNI-ct--nqaL 326 (429)
T PF02347_consen 251 IVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNI-CT--NQAL 326 (429)
T ss_dssp EEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT----S--S-HH
T ss_pred EEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhh-hh--hHHH
Confidence 99776 8876 567779999988410 000001112111 11111 11 1122
Q ss_pred HHHHH--HHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCC
Q 009673 358 GGLAV--CLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKN 435 (529)
Q Consensus 358 aala~--al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~ 435 (529)
.|+.+ -+..+..+++++..+++..++.++++.|.+. +.+...+..-+-.++.... .....++.+.....|+...
T Consensus 327 ~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~-~~~~~~~~~f~e~v~~~~~-~~~~~~l~~~~~~~gl~~~-- 402 (429)
T PF02347_consen 327 LALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI-YGLPFDNPFFFEFVVVFSK-DKEVEELLKRGIEGGLNLR-- 402 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT-TBECSSSSSBSSEEEEESS--HHHHHHHHTT----EEEG--
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh-cCcccCCCCceeeeeecCC-cHHHHHHHHHHHhcCCCcc--
Confidence 22221 2334445678999999999999999999885 2222221111112222221 1112224444444564432
Q ss_pred CCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673 436 SVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473 (529)
Q Consensus 436 ~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i 473 (529)
.| ..+.+-|+....+ +++|++.+++++
T Consensus 403 -~~------~~~~~li~~TE~~----t~edid~lv~~f 429 (429)
T PF02347_consen 403 -YP------DDGALLICVTETR----TKEDIDRLVEAF 429 (429)
T ss_dssp -GG-------SSEEEEE--TT------HHHHHHHHH--
T ss_pred -cc------CCCeEEEEccCCC----CHHHHHHHHhcC
Confidence 12 2346777765544 579999998864
No 332
>PRK06105 aminotransferase; Provisional
Probab=99.27 E-value=5.1e-09 Score=112.08 Aligned_cols=323 Identities=14% Similarity=0.099 Sum_probs=171.3
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
.-+|+|.+|+...+.+ +.......++. ++ .+..+.+++.+++..+.+ ......||++|+.+++....
T Consensus 64 h~~p~i~~Ai~~q~~~-~~~~~~~~~~~--~~----~~~~lae~L~~~~p~~~~---~v~f~~SGseAve~AlKlar~~~ 133 (460)
T PRK06105 64 FSEQRLVEAAARQMKK-LPFYHTFSHKS--HG----PVIDLAEKLVAMAPVPMS---KVFFTNSGSEANDTVVKLVWYYN 133 (460)
T ss_pred CCCHHHHHHHHHHHHh-CCCeecccccC--CH----HHHHHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 3578999999887753 22111111111 11 111233677777754322 22446899999998887531
Q ss_pred ----CCC-CEEEEcCCCC-Cccccccccccccccccccc------------eEEEEEcccCCC---CC-------CCCHH
Q 009673 190 ----KPH-DRIMGLDLPH-GGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES---TG-------LVDYD 241 (529)
Q Consensus 190 ----~pG-D~Vl~~~~~~-~g~~s~g~~~~~~~i~~~g~------------~~~~v~~~v~~~---~~-------~iD~d 241 (529)
.+| .+|+...-.| |.++. ..+..+. .+..++++.... .+ ...++
T Consensus 134 ~~~g~t~r~~il~~~~~yHG~t~~--------a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 205 (460)
T PRK06105 134 NALGRPEKKKIISRQRGYHGVTIA--------SASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLAN 205 (460)
T ss_pred HhcCCCCCcEEEEecCccCCcchh--------heeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHH
Confidence 133 4677766543 32211 1111110 011122221000 00 01246
Q ss_pred HHHHHhhh---cCCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEecccc-cccccccccCCCCC-cccEEEe
Q 009673 242 MLEKTAIL---FRPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVADPFK-YCDVVTT 310 (529)
Q Consensus 242 ~le~~i~~---~~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~-~Gli~~~~~~~~~~-~aDiv~~ 310 (529)
++++.+.. .++.+||+.. .+.+...+ +++++++|++||+++|+|++|. .|-........-+. ..|+++.
T Consensus 206 ~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~ 285 (460)
T PRK06105 206 ELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVM 285 (460)
T ss_pred HHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeeee
Confidence 67777742 2456777753 22222333 8999999999999999999973 44332110000011 3688865
Q ss_pred cccccccCC--CCeEEEeeCCCcchhHHHhhhccc-----c--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 009673 311 TTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA-----V--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381 (529)
Q Consensus 311 S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~-----~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~ 381 (529)
+ |.++|. ..|.+++++ ++.+.+... . ..++.++......+++ ++|+.+.++ +..+++.+
T Consensus 286 g--K~lggG~~P~~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~-a~L~~i~~~---~l~~~v~~ 353 (460)
T PRK06105 286 S--KQLSSSYQPLSAVLMNE------KVYDPIADESGKIGTFGHGFTASGHPVAAAVAL-ENLAIIEER---DLVGNAAE 353 (460)
T ss_pred e--cccccCcccceEEEEcH------HHHHHHhcccccCcccccCCCCCCCHHHHHHHH-HHHHHHHhc---cHHHHHHH
Confidence 4 999653 578888887 666655321 0 1223344333333333 367776543 45677777
Q ss_pred HHHHHHHHHHhc-CcEEecC--CCCCceEEEccCCCC-----Cc-----HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCe
Q 009673 382 NCRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-----ID-----GARVEKILDMASITLNKNSVPGDKSALVPGG 448 (529)
Q Consensus 382 ~a~~l~~~L~~~-G~~v~~~--gt~~~~~~v~~~~~~-----i~-----~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~ 448 (529)
..++|.+.|++. .+.++.. |. .-+.-+.+.... .+ ...+.+.+.+.||.+... ...
T Consensus 354 ~g~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~----------g~~ 422 (460)
T PRK06105 354 RGARLQARLRALADHPLVGEVRGV-GLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAM----------GDT 422 (460)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEec-ceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEec----------CCE
Confidence 788888887663 2222211 11 122223331110 00 134666777899998421 246
Q ss_pred EEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 449 IRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 449 iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
+|+..| ++ ++++|++++.+.+.+++...
T Consensus 423 i~l~Pp-l~---it~~eid~~~~~l~~~l~~~ 450 (460)
T PRK06105 423 LAFCPP-LI---ITAAQVDEMVDRFGRALDDV 450 (460)
T ss_pred EEEECC-Cc---cCHHHHHHHHHHHHHHHHHH
Confidence 999754 43 56999999999999998753
No 333
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.27 E-value=7.1e-09 Score=109.61 Aligned_cols=323 Identities=15% Similarity=0.114 Sum_probs=166.5
Q ss_pred CCcHHHHHHHhhhhhc-cCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCC-CCceeeecCChHHHHHHHHHhhc-
Q 009673 113 FTSRAVMEAVGSCLTN-KYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN-KWGVNVQPLSGSPANFEVYTAIL- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~-~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~-~~~~~V~~~sGs~A~~~~l~all- 189 (529)
.-.|.|.+|+...+.. .+..+. . + .++ ...++ .+++.++...+.. ...+....+||++|+..++....
T Consensus 51 h~~p~v~~ai~~ql~~~~~~~~~---~-~-~~~---~~~~l-ae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~ 121 (412)
T TIGR02407 51 HNNPKLKQALIDYLADDGIIHSL---D-M-ATE---AKREF-LETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARK 121 (412)
T ss_pred CCCHHHHHHHHHHHhhccceecc---c-c-CcH---HHHHH-HHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhh
Confidence 4578999998877753 121110 0 1 111 11222 2555555321110 00022224799999998886442
Q ss_pred -CCCCEEEEcCCCCCccccccccccccccccccce----------EEEEEcccCC-CC-CCCCHHHHHHHhhhc-----C
Q 009673 190 -KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY----------FESMPYRLDE-ST-GLVDYDMLEKTAILF-----R 251 (529)
Q Consensus 190 -~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~----------~~~v~~~v~~-~~-~~iD~d~le~~i~~~-----~ 251 (529)
....+|+...-.|-|.- .+ .++..+.. ..++.+|... .. ..-+++.+++.+.++ +
T Consensus 122 ~tgr~~ii~~~~~yHG~t-~~------als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 194 (412)
T TIGR02407 122 VTGRSNVVSFTNAFHGMT-LG------SLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDL 194 (412)
T ss_pred hcCCCeEEEECCCcCCch-HH------HHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCc
Confidence 22357887765432221 00 01111100 0112222210 00 012467788887632 3
Q ss_pred CcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEeccccccc--CCC
Q 009673 252 PKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR--GPR 320 (529)
Q Consensus 252 pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~--Gpr 320 (529)
+.+|++..- +..+ ..-+++|+++|++||+++|.|+++. |+--.|.. . .... ..|++++ .|+++ |.+
T Consensus 195 ~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~~~~~v~PDi~~~--~K~lg~~G~p 271 (412)
T TIGR02407 195 PAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQA-GCGRTGTFFSFEPAGIEPDIVCL--SKSISGYGLP 271 (412)
T ss_pred eEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhHHhcccCCCCCEEEe--chhccCCccc
Confidence 466776522 1122 2248899999999999999999964 43111100 0 0011 3588765 49984 556
Q ss_pred CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHH-hcCchHHHHHHHHHHHHHHHHHHHHh----cC-
Q 009673 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH-AQSPEFKVYQNKVVSNCRALASRLVE----LG- 394 (529)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~-~~~~~~~~~~~~i~~~a~~l~~~L~~----~G- 394 (529)
.|++++++ ++ +.+.........++ +....++..++++. +.+. ++.+++.+..+++.+.|+. .+
T Consensus 272 igav~~~~------~~-~~~~~~~~~~T~~g-npl~~aaa~a~l~~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~ 340 (412)
T TIGR02407 272 LALTLIKP------EL-DVWKPGEHNGTFRG-NNLAFVTATAALEYYWSDD---AFEKAVQRKSEIIQERLDRIVAEYPE 340 (412)
T ss_pred eeEEEEch------hh-hccCCCccCCCCCc-cHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 79999987 44 33332222222333 23333333335664 4332 3445555556666666654 22
Q ss_pred cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673 395 YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 474 (529)
Q Consensus 395 ~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~ 474 (529)
+.....+ ...+.++.+... .....+.+.|.+.||.+... + .....|||..+.. ++++|++++.+.|+
T Consensus 341 ~~~~vrg-~Gl~~~l~l~~~-~~~~~~~~~~~~~Gv~v~~~---~----~~~~~lr~~p~l~----~t~~~i~~~~~~l~ 407 (412)
T TIGR02407 341 LIKQVRG-RGLMQGIECGDG-DLAGKIAKAAFENGLIIETS---G----PNDEVIKLLPPLT----IDEETLQQGLDILE 407 (412)
T ss_pred ceEeeec-ceeEEEEEecCh-HHHHHHHHHHHHCCCEEecc---C----CCCCEEEEECCCC----CCHHHHHHHHHHHH
Confidence 2111111 234456666431 12356777888899998532 0 1246799976543 56999999999999
Q ss_pred HHHH
Q 009673 475 EGVE 478 (529)
Q Consensus 475 ~~~~ 478 (529)
+++.
T Consensus 408 ~~l~ 411 (412)
T TIGR02407 408 QAVE 411 (412)
T ss_pred HHHh
Confidence 8874
No 334
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.27 E-value=7.5e-12 Score=125.89 Aligned_cols=244 Identities=18% Similarity=0.246 Sum_probs=54.5
Q ss_pred CCCCCcHHHHHHHhhhhhccCC-------CCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673 110 SENFTSRAVMEAVGSCLTNKYS-------EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (529)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~-------~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~ 182 (529)
+-.++++++.+++..... .|+ .|-.|.|| +.++ +.++.++|++.. +.+++.+.|++
T Consensus 14 GRs~l~~~a~~a~~~~a~-~Y~nLE~dl~~G~Rg~R~-------~~v~----~ll~~ltgAeaA-----~VvNnnaAAv~ 76 (367)
T PF03841_consen 14 GRSPLSEEAIEAVAEVAS-GYSNLEYDLETGKRGSRY-------AHVE----ELLCELTGAEAA-----LVVNNNAAAVL 76 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccc-cccccccccccccccccc-------cccc----cccccccccccc-----ccccccccccc
Confidence 344678888888765442 232 23344443 2233 567889999864 22356668888
Q ss_pred HHHHhhcCCCCEEEEcCC---CCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 009673 183 EVYTAILKPHDRIMGLDL---PHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG- 258 (529)
Q Consensus 183 ~~l~all~pGD~Vl~~~~---~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~- 258 (529)
.++.++. +|.+|++..- +.||.+- . ...+..+|+ +.+.+... ..-.+++.+++|++ +|.+|+-.
T Consensus 77 L~l~~la-~~~EvIvsRGelVeiGgsFR--i---p~vm~~sGa--~lvEVGtt---N~t~~~Dye~AI~e-~Ta~ll~Vh 144 (367)
T PF03841_consen 77 LALNTLA-KGKEVIVSRGELVEIGGSFR--I---PDVMRQSGA--RLVEVGTT---NRTHLSDYEKAITE-NTAALLKVH 144 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccc-cccccccccccccccccccc--c---ccccccccc--cccccccc---cccccccccccccc-ccccccccc
Confidence 8888776 5777776532 2333321 1 013344554 56665543 23456677889988 88877544
Q ss_pred CCCCC-----CCCCHHHHHHHHHHhCCEEEEeccccccccc----cccc--CC---CCC-cccEEEecccccccCCCCeE
Q 009673 259 ASAYP-----RDFDYPRMRQIADAVGALLMMDMAHISGLVA----ASVV--AD---PFK-YCDVVTTTTHKSLRGPRGGM 323 (529)
Q Consensus 259 ~s~~p-----~~~d~~~i~~ia~~~g~~livD~ah~~Gli~----~~~~--~~---~~~-~aDiv~~S~hK~l~GprgG~ 323 (529)
.|||- ...+++++.++|++||+++++|.+ +|... .+.. ++ .+. ++|+|+||..|.|.||+.|+
T Consensus 145 ~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~Dlg--sG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGi 222 (367)
T PF03841_consen 145 TSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLG--SGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGI 222 (367)
T ss_dssp ----------------HHHHHHHHHT--EEEE-T--THHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-EE
T ss_pred ccccccccccccccHHHHHHHHhhcCCcEEEECC--CCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEE
Confidence 45552 256899999999999999999985 44331 1111 11 122 89999999999999999999
Q ss_pred EEeeCCCcchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCch-----------HHHHHHHHHHHHHHHHHHHH
Q 009673 324 IFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPE-----------FKVYQNKVVSNCRALASRLV 391 (529)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~-----------~~~~~~~i~~~a~~l~~~L~ 391 (529)
|++++ ++++++++... ..+. ..-..++++..+|+....++ +..-.+.+.++++.|...|.
T Consensus 223 I~Gkk------~lI~~lk~~pl~Ralr--vdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~ 294 (367)
T PF03841_consen 223 IVGKK------ELIEKLKKHPLGRALR--VDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLK 294 (367)
T ss_dssp EEEEH------HHHHHHHHHHHTTT-B----HHHHHHHHHHHHH------------------------------------
T ss_pred EEeCH------HHHHHHhhCCCcceEe--eCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccc
Confidence 99999 78887764321 1110 12346778877777554311 12334556666777777776
Q ss_pred h
Q 009673 392 E 392 (529)
Q Consensus 392 ~ 392 (529)
.
T Consensus 295 ~ 295 (367)
T PF03841_consen 295 A 295 (367)
T ss_dssp -
T ss_pred c
Confidence 5
No 335
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.27 E-value=2.7e-09 Score=113.18 Aligned_cols=320 Identities=13% Similarity=0.075 Sum_probs=175.4
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
.-+|+|.+++...+. ++...... . +.. ...++ ..+++.++++-..+ ......||++|+..++....
T Consensus 61 h~~p~v~~ai~~~~~-~~~~~~~~-~-~~~---~~~~~--la~~l~~~~~~~~~---~v~f~~sGseA~e~AlklAr~~~ 129 (427)
T TIGR00508 61 YNHPRLNAAAQKQID-KMSHVMFG-G-FTH---KPAIE--LCQKLVKMTPNALD---CVFLADSGSVAVEVALKMALQYW 129 (427)
T ss_pred CCCHHHHHHHHHHHH-hcCCcccc-c-cCC---HHHHH--HHHHHHhhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 457888888887664 33211111 0 111 11222 23566677653322 23556899999998876432
Q ss_pred ----CCC-CEEEEcCCCCCccccccccccccccccccc-----------e--EEEEEcccCCC--C-CCCCHHHHHHHhh
Q 009673 190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----------Y--FESMPYRLDES--T-GLVDYDMLEKTAI 248 (529)
Q Consensus 190 ----~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~-----------~--~~~v~~~v~~~--~-~~iD~d~le~~i~ 248 (529)
.+| .+|+...-.|-|+.. + .....+. . ...++++.... . ..-|++++++.+.
T Consensus 130 ~~~~~~~r~~il~~~~~yHG~t~-~------~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~ 202 (427)
T TIGR00508 130 QAKGEKNRQKFLTIRSGYHGDTF-G------AMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLME 202 (427)
T ss_pred HhhCCCCccEEEEEcCCcCCccH-h------hhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHH
Confidence 133 578877765433311 0 0111110 0 01111111100 0 0125677777776
Q ss_pred hc--CCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEecccccc
Q 009673 249 LF--RPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSL 316 (529)
Q Consensus 249 ~~--~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l 316 (529)
.. +..+|++.. +..++ ..++++|+++|++||+++|+|++| .|+...|.. ..-+. ..|+++ +.|.|
T Consensus 203 ~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l 279 (427)
T TIGR00508 203 LHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TGFGRTGKLFACEHAGVVPDILC--VGKAL 279 (427)
T ss_pred hcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCCccchhhhcCCCCCEEE--echhh
Confidence 42 345666653 33332 346899999999999999999998 564322211 11111 368876 57998
Q ss_pred cCC--CCeEEEeeCCCcchhHHHhhhcccc-----cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 009673 317 RGP--RGGMIFFKKDPVLGVELESAINNAV-----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 389 (529)
Q Consensus 317 ~Gp--rgG~i~~~~~~~~~~~l~~~i~~~~-----~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~ 389 (529)
.|. ..+.+++++ ++.+.++... .....++ +...+++..++++.+... +..+++.++.++|.+.
T Consensus 280 ~gG~~p~~a~~~~~------~~~~~~~~~~~~~~~~~~T~~g-~p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~ 349 (427)
T TIGR00508 280 TGGYMTLSATVTTD------KVAQTISSGEAGCFMHGPTFMG-NPLACAVAEASLAILLEG---EWQKQVSAIENQLKRE 349 (427)
T ss_pred hcCcccceEEEEcH------HHHHHHhcCCCCccccCCCCCc-CHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHH
Confidence 442 346677766 6666654321 1122233 333444444467765443 3457777888889998
Q ss_pred HHhcCcE-EecCC-CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673 390 LVELGYK-LVSGG-SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 467 (529)
Q Consensus 390 L~~~G~~-v~~~g-t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~ 467 (529)
|++.+.. .+... ....+..+.+... .+...+.+.|.+.||.+... ...+|+..+.. ++++|++
T Consensus 350 L~~l~~~~~i~~vrg~G~~~~i~~~~~-~~~~~~~~~l~~~Gv~~~~~----------~~~l~~~ppl~----~t~~~id 414 (427)
T TIGR00508 350 LSPLRKNPVVKDVRVLGAIGVVEMYKP-VNVEELQKKFVEQGVWIRPF----------GKLIYVMPPYI----ITTEQLQ 414 (427)
T ss_pred HHHhhcCCCEEeEeccccEEEEEECCc-cCHHHHHHHHHHCCeEEEec----------CCEEEEECCCC----CCHHHHH
Confidence 8774321 11110 0123444444322 23466788888899998421 13689976533 5689999
Q ss_pred HHHHHHHHHHH
Q 009673 468 AIADFIHEGVE 478 (529)
Q Consensus 468 ~la~~i~~~~~ 478 (529)
++.+.+++++.
T Consensus 415 ~~~~~l~~~l~ 425 (427)
T TIGR00508 415 KLTAALIEALH 425 (427)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 336
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.27 E-value=2.2e-09 Score=113.69 Aligned_cols=319 Identities=16% Similarity=0.097 Sum_probs=172.7
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
.-.|.|.+|+...+.. ....... ...++ ...++ .+++.+++....+ ......|||+|+..++....
T Consensus 59 h~~p~i~~Ai~~q~~~-~~~~~~~---~~~~~---~~~~l-a~~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~~ 127 (428)
T PRK07986 59 YNHPQLNAAMKSQIDA-MSHVMFG---GITHP---PAIEL-CRKLVAMTPQPLE---CVFLADSGSVAVEVAMKMALQYW 127 (428)
T ss_pred CCCHHHHHHHHHHHhh-cCCcccc---ccCCH---HHHHH-HHHHHhhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 3468899888877643 2111110 00112 11222 3666776643222 23456899999998876432
Q ss_pred ----CCCCEEEEcCCCCCccccccccccccccccccc-------------eEEEEEcccCCCC--C-CCCHHHHHHHhhh
Q 009673 190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDEST--G-LVDYDMLEKTAIL 249 (529)
Q Consensus 190 ----~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~-------------~~~~v~~~v~~~~--~-~iD~d~le~~i~~ 249 (529)
....+|+...-.|-|.- .+ ..+..+. ....++++..... + .-|++++++.++.
T Consensus 128 ~~~g~~r~kii~~~~~yHG~t-~~------a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~ 200 (428)
T PRK07986 128 QAKGEPRQRFLTLRHGYHGDT-FG------AMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAA 200 (428)
T ss_pred HhcCCCCcEEEEECCCcCCCc-Hh------hhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHh
Confidence 22367888876542221 01 0111110 0011122110000 0 2356778887764
Q ss_pred c--CCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEeccccccc
Q 009673 250 F--RPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR 317 (529)
Q Consensus 250 ~--~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~ 317 (529)
. +..+|++.. ...++ ...+++|+++|++||+++|+|++| .|+--.|.. . .-+. ..|+++ +.|.+.
T Consensus 201 ~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~-tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~ 277 (428)
T PRK07986 201 HRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA-TGFGRTGKLFACEHAGIAPDILC--LGKALT 277 (428)
T ss_pred CCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCCeeeecccCCCCCEEE--echhhh
Confidence 2 334566653 23333 123899999999999999999998 664222211 0 0111 358886 579985
Q ss_pred CC--CCeEEEeeCCCcchhHHHhhhcccc-----cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673 318 GP--RGGMIFFKKDPVLGVELESAINNAV-----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (529)
Q Consensus 318 Gp--rgG~i~~~~~~~~~~~l~~~i~~~~-----~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L 390 (529)
|. ..|.+++++ ++.+.+.... ...++++ +....++..++|+.+.+. ++.+++.++.++|.+.|
T Consensus 278 gG~~p~~av~~~~------~i~~~~~~~~~~~~~~~~T~~g-~p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l 347 (428)
T PRK07986 278 GGTMTLSATLTTR------EVAETISNGEAGCFMHGPTFMG-NPLACAVANASLSLLESG---DWQQQVAAIEAQLREEL 347 (428)
T ss_pred CCcccCcchhchH------HHHHHhhcCCCCccccCCCCCc-CHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHH
Confidence 32 446667776 6666654311 1223334 333444444467766543 34667777778888888
Q ss_pred Hhc-CcEEecC--CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673 391 VEL-GYKLVSG--GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 467 (529)
Q Consensus 391 ~~~-G~~v~~~--gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~ 467 (529)
++. .+..+.. + ...+..+.+... .+...+.+.|.+.||.+... ...||+.-| ++ ++++|++
T Consensus 348 ~~l~~~~~i~~vRg-~Gl~~~ve~~~~-~~~~~~~~~l~~~Gl~~~~~----------g~~i~~~Pp-l~---it~~ei~ 411 (428)
T PRK07986 348 APLRDAPMVADVRV-LGAIGVVETTRP-VNMAALQRFFVEQGVWIRPF----------GKLIYLMPP-YI---ILPEQLQ 411 (428)
T ss_pred HHHhcCCCEEeEec-cceEEEEEeCCc-ccHHHHHHHHHHCCcEEEec----------CCEEEEeCC-CC---CCHHHHH
Confidence 763 2322221 1 123333444321 13456778888999998431 247999644 44 6799999
Q ss_pred HHHHHHHHHHH
Q 009673 468 AIADFIHEGVE 478 (529)
Q Consensus 468 ~la~~i~~~~~ 478 (529)
++.++|.+++.
T Consensus 412 ~~~~~l~~~l~ 422 (428)
T PRK07986 412 RLTAAVNRAVQ 422 (428)
T ss_pred HHHHHHHHHHh
Confidence 99999999885
No 337
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.26 E-value=4.7e-09 Score=112.29 Aligned_cols=187 Identities=17% Similarity=0.223 Sum_probs=110.3
Q ss_pred HHHHHHHHHHhCCEEEEecccccccccccccCCCCC----cccEEEecccccc-cCCCCeEEEeeCCCcchhHHHhhhcc
Q 009673 268 YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINN 342 (529)
Q Consensus 268 ~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~aDiv~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~ 342 (529)
+++|+++|++||+++|+|+.+ .|+...+.. .++. ..|++ |++|.+ +|+|.|++++++ ++.+.+..
T Consensus 242 l~~l~~l~~~~gillI~DEV~-tg~gr~g~~-~a~~~~~v~pDi~--t~sK~l~~G~pig~v~~~~------~i~~~~~~ 311 (451)
T PRK06918 242 VQEVRNICSEHGILFVADEIQ-TGFARTGKY-FAIEHFDVVPDLI--TVSKSLGAGVPISGVIGRK------EIMDESAP 311 (451)
T ss_pred HHHHHHHHHHcCCEEEEeccc-cCcCccCce-ehhHhcCCCCCEE--eeehhhcCCCccEEEEEcH------HHHhccCC
Confidence 889999999999999999984 455333321 1111 25755 577998 678889999987 67776654
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEec--CCCCCceEEEccC-CC--C
Q 009673 343 AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS--GGSDNHLVLVDLR-PM--G 415 (529)
Q Consensus 343 ~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~--~gt~~~~~~v~~~-~~--~ 415 (529)
.......+++.....++++ +++.+.+.++. +++.+..+.+.+.|++. ++.++. .+. ..+..+.+. +. .
T Consensus 312 ~~~~~T~~g~~l~~aaa~a-~l~~i~~~~~~---~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~-G~~~~~~~~~~~~~~ 386 (451)
T PRK06918 312 GELGGTYAGSPLGCAAALA-VLDIIEKENLN---DRAIELGKVVMNRFEEMKNKYNCIGDVRGL-GAMCAFELVQDRKTK 386 (451)
T ss_pred CCcCcCCCcCHHHHHHHHH-HHHHHHHCCHH---HHHHHHHHHHHHHHHHHHhhCCCceeeccc-eeEEEEEEccCCCcC
Confidence 3333344454444444443 56655444443 33444455566665542 222211 122 223333221 10 1
Q ss_pred C----cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 416 I----DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 416 i----~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
. ....+.+.|.++||.+. |+.. + .+.+||+.+.. +++++++++++.|.+++...
T Consensus 387 ~~~~~~~~~l~~~~~~~Gvlv~----~~~~--~-~~~lrl~p~l~----~t~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 387 EPDKTLTANICKEANKRGLLLL----SAGT--Y-GNVIRVLMPLV----ITDEQLEEGLTIIEESLQAC 444 (451)
T ss_pred CCcHHHHHHHHHHHHHCCeEEe----ecCC--C-CCEEEEECCCc----cCHHHHHHHHHHHHHHHHHH
Confidence 1 12345666678999984 3311 1 36799986542 45899999999999988654
No 338
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.26 E-value=6.2e-09 Score=110.99 Aligned_cols=322 Identities=17% Similarity=0.135 Sum_probs=168.9
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
.-.|+|.+++...+.+ ...+.. +...++ ...+ ..+++.+++....+. ....+||++|+..++....
T Consensus 65 h~~p~v~~ai~~ql~~-l~~~~~---~~~~~~---~~~~-la~~L~~~~p~~~~~---v~f~~sGseAve~AlklAr~~~ 133 (445)
T PRK09221 65 HGRPEIVEAVARQAAT-LDYAPA---FQMGHP---LAFE-LAERLAELAPGGLDH---VFFTNSGSESVDTALKIALAYH 133 (445)
T ss_pred CCCHHHHHHHHHHHHh-ccCccc---cccCCH---HHHH-HHHHHHHhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHH
Confidence 3578888888877643 211111 111122 1222 336677776432221 2446899999998876432
Q ss_pred ---C-C-CCEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCCCC--CC--------CCHHH
Q 009673 190 ---K-P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDEST--GL--------VDYDM 242 (529)
Q Consensus 190 ---~-p-GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~------------~~~~v~~~v~~~~--~~--------iD~d~ 242 (529)
. + ..+|+...-.|-|.- .+ .++..+. .+..++++.+... +. -..++
T Consensus 134 ~~~g~~~r~~ii~~~~~yHG~t-~g------als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (445)
T PRK09221 134 RARGQGTRTRLIGRERGYHGVG-FG------GISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADD 206 (445)
T ss_pred HhcCCCCCcEEEEECCCcCccc-hh------hhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHH
Confidence 1 2 247887765442220 01 0111110 0112222210000 00 11356
Q ss_pred HHHHhhhc---CCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEecccc-cccccccccCCCCC-cccEEEec
Q 009673 243 LEKTAILF---RPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVADPFK-YCDVVTTT 311 (529)
Q Consensus 243 le~~i~~~---~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~-~Gli~~~~~~~~~~-~aDiv~~S 311 (529)
+++.+... +..+|++.. ++.+...+ +++++++|++||+++|+|++|. .|-........-+. ..|++++
T Consensus 207 l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~- 285 (445)
T PRK09221 207 LERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIITF- 285 (445)
T ss_pred HHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEEe-
Confidence 77777532 345666652 22233445 8999999999999999999974 22211110000011 2587765
Q ss_pred ccccccC--CCCeEEEeeCCCcchhHHHhhhccc-------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673 312 THKSLRG--PRGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (529)
Q Consensus 312 ~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~ 382 (529)
.|.++| ...|.+++++ ++.+.+... ....+.+++.....+++ ++|+.+..+ ...+++.+.
T Consensus 286 -gK~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~-a~L~~i~~~---~l~~~~~~~ 354 (445)
T PRK09221 286 -AKGLTNGAIPMGAVIASD------EIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGL-ATLDIYREE---DLFERAAEL 354 (445)
T ss_pred -ccccccCcccceeeEEcH------HHHHhhccCcccccccccccCCCcCHHHHHHHH-HHHHHHHhc---cHHHHHHHH
Confidence 499854 3467777776 565544321 11223344344333333 467766543 346677777
Q ss_pred HHHHHHHHHhc-CcEEecCCC-CCceEEEccCCC----CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCC
Q 009673 383 CRALASRLVEL-GYKLVSGGS-DNHLVLVDLRPM----GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM 456 (529)
Q Consensus 383 a~~l~~~L~~~-G~~v~~~gt-~~~~~~v~~~~~----~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~ 456 (529)
.++|.+.|++. ++..+.+-. ..-+.-+.+... ......+.+.|.+.||.+.. ....+|+..+ +
T Consensus 355 g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~----------~~~~lr~~Pp-l 423 (445)
T PRK09221 355 APYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRY----------TGDTIALSPP-L 423 (445)
T ss_pred HHHHHHHHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEee----------cCCEEEEECC-c
Confidence 88888888763 333222100 111222233211 11124566778889999843 1247999754 4
Q ss_pred ccCCCCHHHHHHHHHHHHHHHH
Q 009673 457 TTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 457 tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+ ++++|++++.+.|++++.
T Consensus 424 ~---~t~~eid~~~~~l~~~l~ 442 (445)
T PRK09221 424 I---IEKAQIDELVDALGDALR 442 (445)
T ss_pred c---CCHHHHHHHHHHHHHHHH
Confidence 3 579999999999999885
No 339
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.26 E-value=1.3e-08 Score=108.39 Aligned_cols=322 Identities=18% Similarity=0.125 Sum_probs=167.9
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
.-.|.|.+|+...+.. ...+.. +...++. .. ...+++.+++....+ .....+||++|+..++....
T Consensus 62 h~~p~v~~ai~~ql~~-l~~~~~---~~~~~~~---~~-~la~~l~~~~p~~~~---~v~f~~sGseA~e~AlklAr~~~ 130 (442)
T PRK13360 62 HGRPEIVEAVRAQAGE-LDYAPA---FQMGHPK---AF-ELANRIAEIAPGGLN---HVFFTNSGSESVDTALKIALAYH 130 (442)
T ss_pred CCCHHHHHHHHHHHHh-CCCccc---CCcCCHH---HH-HHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 4578888888877642 221111 1111221 12 233667777632222 12456899999998876432
Q ss_pred ----CC-CCEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCCCC--CCC--------CHHH
Q 009673 190 ----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDEST--GLV--------DYDM 242 (529)
Q Consensus 190 ----~p-GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~------------~~~~v~~~v~~~~--~~i--------D~d~ 242 (529)
++ ..+|+...-.|-|.- .+ .++..|. .+..++++.+... +.. ..++
T Consensus 131 ~~~g~~~r~~ii~~~~~yHG~t-~g------als~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 203 (442)
T PRK13360 131 RARGEGSRTRLIGRERGYHGVG-FG------GISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADE 203 (442)
T ss_pred HhcCCCCCcEEEEEcCCcCCcc-Hh------hhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHH
Confidence 12 257888775542220 01 0111110 0122222211000 100 2457
Q ss_pred HHHHhhhc---CCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEecccc-cccccccccCCCCC-cccEEEec
Q 009673 243 LEKTAILF---RPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVADPFK-YCDVVTTT 311 (529)
Q Consensus 243 le~~i~~~---~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~-~Gli~~~~~~~~~~-~aDiv~~S 311 (529)
+++.+... ++.+|++.. +..+...+ +++|+++|++||+++|+|++|. .|-........-+. ..|++++
T Consensus 204 le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~- 282 (442)
T PRK13360 204 LERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTC- 282 (442)
T ss_pred HHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCceeee-
Confidence 77777532 344566652 22223445 9999999999999999999983 33322111000111 3588754
Q ss_pred ccccccC--CCCeEEEeeCCCcchhHHHhhhccc-------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673 312 THKSLRG--PRGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (529)
Q Consensus 312 ~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~ 382 (529)
.|.+.| ...|.+++++ ++.+.+... ...++.++ +...+++..++|+.+..++ ..+++.++
T Consensus 283 -gK~l~gG~~P~gav~~~~------~i~~~~~~~~~~~~~~~~~~T~~g-~pl~~aaa~a~L~~l~~~~---l~~~~~~~ 351 (442)
T PRK13360 283 -AKGLTNGAIPMGAVFVSS------EIHDAFMQGPEAGIEFFHGYTYSG-HPLACAAALATLDLYEREG---LLTRAARL 351 (442)
T ss_pred -eeccccCccceEEEEEcH------HHHHHhhcCCccccccccCCCCCC-CHHHHHHHHHHHHHHHhCC---HHHHHHHH
Confidence 699964 2355566666 555544321 11223344 3334444444677665433 45666777
Q ss_pred HHHHHHHHHhcC-cEEecC--CCCCceEEEccCCC--C--CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCC
Q 009673 383 CRALASRLVELG-YKLVSG--GSDNHLVLVDLRPM--G--IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPA 455 (529)
Q Consensus 383 a~~l~~~L~~~G-~~v~~~--gt~~~~~~v~~~~~--~--i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~ 455 (529)
.+++.+.|++.+ +..+.+ |. .-+.-+.+.+. + .....+...|.++||.+... ...+||..+.
T Consensus 352 g~~l~~~l~~l~~~~~v~~vrG~-Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~----------~~~lr~~Ppl 420 (442)
T PRK13360 352 APYWEDALHSLRDAPHVIDIRNL-GLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYT----------GDILALSPPL 420 (442)
T ss_pred HHHHHHHHHHhhcCCCeeeeecc-ceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEec----------CCEEEEeCCC
Confidence 778888887632 322211 11 11111222211 1 11245666777899998431 2469997553
Q ss_pred CccCCCCHHHHHHHHHHHHHHHHH
Q 009673 456 MTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 456 ~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
+ ++++|++++.+.|.++++.
T Consensus 421 -~---~t~~eid~~~~~l~~~l~~ 440 (442)
T PRK13360 421 -I---IEEAQIDELFDILAQALKE 440 (442)
T ss_pred -c---cCHHHHHHHHHHHHHHHHH
Confidence 3 5699999999999998853
No 340
>PRK06541 hypothetical protein; Provisional
Probab=99.26 E-value=7e-09 Score=110.99 Aligned_cols=215 Identities=17% Similarity=0.157 Sum_probs=122.3
Q ss_pred HHHHHHhhhc---CCcEEEEcC-CCC-CCCCC----HHHHHHHHHHhCCEEEEeccc-ccccccccccCCCCC-cccEEE
Q 009673 241 DMLEKTAILF---RPKLIIAGA-SAY-PRDFD----YPRMRQIADAVGALLMMDMAH-ISGLVAASVVADPFK-YCDVVT 309 (529)
Q Consensus 241 d~le~~i~~~---~pklIi~~~-s~~-p~~~d----~~~i~~ia~~~g~~livD~ah-~~Gli~~~~~~~~~~-~aDiv~ 309 (529)
+.+++.+... +..+|++.. .+. +...+ +++|+++|++||+++|+|++| .+|-........-+. ..|+++
T Consensus 208 ~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt 287 (460)
T PRK06541 208 DRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT 287 (460)
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE
Confidence 6677777532 334555542 122 22344 899999999999999999997 344322110000011 358876
Q ss_pred eccccccc-CC-CCeEEEeeCCCcchhHHHhhhccc--cc--CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673 310 TTTHKSLR-GP-RGGMIFFKKDPVLGVELESAINNA--VF--PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (529)
Q Consensus 310 ~S~hK~l~-Gp-rgG~i~~~~~~~~~~~l~~~i~~~--~~--p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a 383 (529)
+.|.++ |+ +.|.+++++ ++.+.+... .+ .+..+++.. .+++..+.++.+..+ +..+++.++.
T Consensus 288 --~gK~l~~G~~pigav~~~~------~i~~~~~~~~~~~~~~~T~~gnp~-~~aaala~l~~l~~~---~~~~~~~~~g 355 (460)
T PRK06541 288 --CAKGITSGYSPLGAMIASD------RLFEPFLDGPTMFLHGYTFGGHPV-SAAVALANLDIFERE---GLLDHVRDNE 355 (460)
T ss_pred --ecccccCCccceeEEEEcH------HHHHHhhcCCCccccCCCCCCCHH-HHHHHHHHHHHHHhc---cHHHHHHHHH
Confidence 569985 43 567777776 565554322 11 122333233 333333356655433 3467778888
Q ss_pred HHHHHHHHhc-CcEEec--CCCCCceEEEccCCC-----CCc--------HHHHHHhHhcCCeEEcCCCCCCCCCCCCCC
Q 009673 384 RALASRLVEL-GYKLVS--GGSDNHLVLVDLRPM-----GID--------GARVEKILDMASITLNKNSVPGDKSALVPG 447 (529)
Q Consensus 384 ~~l~~~L~~~-G~~v~~--~gt~~~~~~v~~~~~-----~i~--------~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~ 447 (529)
++|.+.|++. .+.++. .+ ...+.-+.+... ..+ ...+.+.|.+.||.+... | .+..
T Consensus 356 ~~l~~~L~~l~~~~~v~~vrg-~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--~-----~g~~ 427 (460)
T PRK06541 356 PAFRATLEKLLDLPIVGDVRG-DGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRAD--D-----RGDP 427 (460)
T ss_pred HHHHHHHHHhhcCCCeEEEEe-cceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEec--C-----CCCC
Confidence 8888888773 232221 11 122333333110 000 023556677899998531 1 1235
Q ss_pred eEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 448 GIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 448 ~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
.|||+.+ ++ ++++|++++.+.+.+++..
T Consensus 428 ~lrl~Pp-l~---~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 428 VVQLAPP-LI---SGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred EEEEECC-CC---CCHHHHHHHHHHHHHHHHH
Confidence 7999865 33 6799999999999998864
No 341
>PRK07046 aminotransferase; Validated
Probab=99.25 E-value=8.5e-09 Score=110.07 Aligned_cols=314 Identities=13% Similarity=0.072 Sum_probs=166.6
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cCC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~p 191 (529)
-.|.|.+|+...+......+.+ ++ .+....+++.++++.+. + ...+|||+|+..++... ...
T Consensus 92 ~~p~i~~Av~~q~~~~~~~~~~-------~~----~~~~lAe~l~~~~~~~~----v-~F~nSGtEA~e~AlrlAR~~TG 155 (453)
T PRK07046 92 SPAPVARALAEQARRGLTTMLP-------SE----DAAWVGEELARRFGLPY----W-QVATTATDANRFVLRWARAVTG 155 (453)
T ss_pred CCHHHHHHHHHHHHhCCCCCCC-------CH----HHHHHHHHHHHHhCCCE----E-EEECCHHHHHHHHHHHHHHhhC
Confidence 4689999998877643322211 12 22223467777776442 2 44689999999888643 223
Q ss_pred CCEEEEcCCCCCccccccccc--cccc---cccccceE----EEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC--
Q 009673 192 HDRIMGLDLPHGGHLSHGFMT--PKRR---VSGTSIYF----ESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS-- 260 (529)
Q Consensus 192 GD~Vl~~~~~~~g~~s~g~~~--~~~~---i~~~g~~~----~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s-- 260 (529)
.++|+...-.|-|+....... .... ....|... ..+.++ .-|++.+++.+...+..+||+..-
T Consensus 156 r~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~nd~~~l~~~l~~~~vAavi~EPi~g 229 (453)
T PRK07046 156 RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE------FNDLAALEAALADGDVAAVLAEPAMT 229 (453)
T ss_pred CCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC------CCCHHHHHHHhCCCCeEEEEECCCCC
Confidence 467887764433321000000 0000 00001000 011111 237899998885435667777622
Q ss_pred CCCCCC----CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEeccccccc-CCCCeEEEeeCCCcchh
Q 009673 261 AYPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGV 334 (529)
Q Consensus 261 ~~p~~~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~-GprgG~i~~~~~~~~~~ 334 (529)
+.+... -+++++++|++||+++|.|+++.++.-..+. ..-+. ..|+++. .|.++ |...|.+++++
T Consensus 230 ~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~-~~~~gv~PDi~t~--gK~lggG~Pi~av~g~~------ 300 (453)
T PRK07046 230 NIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGY-TRAHGLEPDFLVV--GKPIAGGVPCAVYGFSA------ 300 (453)
T ss_pred CCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcch-hHHhCCCccceee--hhhhcCCCcceeeeehH------
Confidence 222222 2799999999999999999997622111111 11111 3688875 59985 45568888887
Q ss_pred HHHhhhccc---------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCcEEecCC
Q 009673 335 ELESAINNA---------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGG 401 (529)
Q Consensus 335 ~l~~~i~~~---------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~~v~~~g 401 (529)
++.+.+... ...++.++... .+++..+.|+.+.+++ ..+++.+..++|.+.|++ .++.....+
T Consensus 301 ~i~~~~~~~~~~~~~~~~~~~~T~~gnpl-~~aa~~a~L~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g 376 (453)
T PRK07046 301 ELAERAQAAKASAPPGHSGIGTTLSANAL-AMAAMRATLAEVMTEA---AYAHMLALAARLAAGLRAVIARHGLPWHVTR 376 (453)
T ss_pred HHHHHHhhccccCCCCCceeCCCCcccHH-HHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 666655421 01122233233 3443334577665433 345556666677777754 343321111
Q ss_pred CCCceEEEccCCCC----------CcH---HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHH
Q 009673 402 SDNHLVLVDLRPMG----------IDG---ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVA 468 (529)
Q Consensus 402 t~~~~~~v~~~~~~----------i~~---~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~ 468 (529)
... ++.+.+.... .+. ..+...|.+.||.+.. . ...++++.+ ++++|+++
T Consensus 377 ~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~----~------~~~~~~~p~------~t~~did~ 439 (453)
T PRK07046 377 VGA-RVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITP----F------HNMMLVCPA------TTAADVDR 439 (453)
T ss_pred eCc-EEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEec----c------cCcEEEeCC------CCHHHHHH
Confidence 111 2222221100 011 2345556678999842 1 134677643 56899999
Q ss_pred HHHHHHHHHHH
Q 009673 469 IADFIHEGVEI 479 (529)
Q Consensus 469 la~~i~~~~~~ 479 (529)
+++++.+++..
T Consensus 440 ~~~~~~~~l~~ 450 (453)
T PRK07046 440 LVAAFDACLGE 450 (453)
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 342
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.25 E-value=4.9e-10 Score=111.61 Aligned_cols=331 Identities=18% Similarity=0.182 Sum_probs=192.8
Q ss_pred ecCCCCC----cHHHHHHHhhhhhccCCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673 108 IASENFT----SRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (529)
Q Consensus 108 ~asen~~----~~~V~eal~~~l~~~y~~G~p~~r-~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~ 182 (529)
.+|.||. .+++++.....+ .+|.-|..|-| |||....+-.+| +++++++|++.. |...-|-.++.
T Consensus 99 ~aS~NfL~l~~~~~ike~a~~~l-rkyGvGsCGPrGFYGt~DvHldlE----~~iakF~G~E~a-----ivYs~gF~ti~ 168 (467)
T KOG1358|consen 99 FASANFLGLIENEEIKEEASFTL-RKYGVGSCGPRGFYGTIDVHLDLE----KRIAKFMGTEDA-----IVYSYGFSTIE 168 (467)
T ss_pred ccchhhhhhcccHHHHHHHHHHH-HHhCCCCcCCCcccccceeecccH----HHHHHhhCCcce-----eeeccccchhh
Confidence 3577764 678888887666 57877777666 566555555667 789999999973 34455668888
Q ss_pred HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc------CCc---
Q 009673 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF------RPK--- 253 (529)
Q Consensus 183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~------~pk--- 253 (529)
.++.|+.+.||.|.+..-.+.+.. +.+.++- -.+..+. ..|.++++....+. +||
T Consensus 169 S~ipafsKrGDIi~~de~~nfaIq--------~GlqlSR--S~i~~Fk------hndm~~lerll~E~~~~~~K~~k~~~ 232 (467)
T KOG1358|consen 169 SAIPAFSKRGDIIFVDEAVNFAIQ--------KGLQLSR--STISYFK------HNDMEDLERLLPEQEDEDQKNPKKAL 232 (467)
T ss_pred hcchhhhccCcEEEEehhhhHHHH--------HHHhhhh--heeEEec------CCCHHHHHHhccCcchhhhhcccccc
Confidence 899999999999997753221110 1111111 1233332 45666776555321 122
Q ss_pred ---EEEEc--CCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccc---cc--cC-CCCCcccEEEecccccccCCCCe
Q 009673 254 ---LIIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SV--VA-DPFKYCDVVTTTTHKSLRGPRGG 322 (529)
Q Consensus 254 ---lIi~~--~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~---~~--~~-~~~~~aDiv~~S~hK~l~GprgG 322 (529)
.|++. +-|++...|+.+|.++..++...++.|++..+|.... |+ +. .+....|++++|+.-.+ +..||
T Consensus 233 ~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~al-as~Gg 311 (467)
T KOG1358|consen 233 TRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETAL-ASGGG 311 (467)
T ss_pred ceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccc-cccCc
Confidence 34443 5677789999999999999999999999988887654 22 11 22346789999988776 45678
Q ss_pred EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCC
Q 009673 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGG 401 (529)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~g 401 (529)
+..++.-. -..+++....+-+....|....-+|. .++..+.. -.+..+.++.....+-+.|+. .++.+.+.
T Consensus 312 Fc~G~~~i----~~hQrLSg~~Y~fSAslPp~la~aa~-~ai~i~~~--~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~- 383 (467)
T KOG1358|consen 312 FCAGKSFI----ADHQRLSGSGYCFSASLPPYLAGAAI-KAILIEEW--NPEIVQPLRAKVAKFHAALSSNSGFIVSGS- 383 (467)
T ss_pred eeecceee----EeeeeccccceeeeccCchhhhhhHH-HHHHHHhh--CcchhhhhhccccccchhhhcCCceEEecC-
Confidence 88885410 01122322111111122333333332 23332211 133455555555566666766 46666543
Q ss_pred CCCceEEEccCCCCCcHHH--------HHHhHhcCCeEEcCCC-CCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673 402 SDNHLVLVDLRPMGIDGAR--------VEKILDMASITLNKNS-VPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 472 (529)
Q Consensus 402 t~~~~~~v~~~~~~i~~~~--------~~~~L~~~GI~v~~~~-~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~ 472 (529)
..+.+..+.+.....+.++ +.+.+.+ |+.+.... +-+......+-.|||.+. .+|+++|++++++.
T Consensus 384 ~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~----a~~seeel~ra~~~ 458 (467)
T KOG1358|consen 384 PESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVS----AGMSEEELERAAEL 458 (467)
T ss_pred cCCceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEe----CCCCHHHHHHHHHH
Confidence 3455555545432222221 2233333 77664322 212111112457999764 47999999999999
Q ss_pred HHHHHH
Q 009673 473 IHEGVE 478 (529)
Q Consensus 473 i~~~~~ 478 (529)
|++...
T Consensus 459 ik~~~~ 464 (467)
T KOG1358|consen 459 IKEVAS 464 (467)
T ss_pred HHHHHH
Confidence 988755
No 343
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.25 E-value=1.2e-08 Score=108.76 Aligned_cols=200 Identities=20% Similarity=0.189 Sum_probs=116.4
Q ss_pred CCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEeccccccc-CCC
Q 009673 251 RPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPR 320 (529)
Q Consensus 251 ~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l~-Gpr 320 (529)
+..+||+.. ++.+...+ +++|.++|++||+++|+|++|. |+...+... ..+. ..|+++ +.|.++ |.+
T Consensus 221 ~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t-G~gr~G~~~a~~~~gv~pDivt--~~K~l~~G~p 297 (441)
T PRK05769 221 EVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT-GMGRTGKMFAIEHFGVEPDIIT--LAKAIAGGLP 297 (441)
T ss_pred ceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccceehhhccCCCCCEEE--EcccccCCcc
Confidence 455666652 22233455 9999999999999999999976 542222110 1111 358876 459884 566
Q ss_pred CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC--cEEe
Q 009673 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLV 398 (529)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G--~~v~ 398 (529)
.|++++++ ++.+..... ...+.++......++ ..+|+.+.+ +..+++.++.++|.+.|++.. +.++
T Consensus 298 ~gav~~~~------~i~~~~~~~-~~~T~~g~p~~~aaa-~a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~~~~~ 365 (441)
T PRK05769 298 LGAVIGRA------ELMFLPPGS-HANTFGGNPVAAAAA-LATLEELEE----GLLENAQKLGEYLRKELKELKEKYEFI 365 (441)
T ss_pred cEEEEEeh------hhhhcCCCC-CCCCCCcCHHHHHHH-HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 78888887 454433221 222333433333333 345766542 446677777888888886632 3332
Q ss_pred cC--CCCCceEEEccCCC-C-Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673 399 SG--GSDNHLVLVDLRPM-G-ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 471 (529)
Q Consensus 399 ~~--gt~~~~~~v~~~~~-~-i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~ 471 (529)
.. +. ..+.-+.+... . -+ ...+.+.|.+.||.+.. .+...+|+..+. + ++++|++++.+
T Consensus 366 ~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~---------~~~~~lr~~p~l-~---~t~~~id~~~~ 431 (441)
T PRK05769 366 GDVRGL-GLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLG---------AGKSAIRIIPPL-I---ITEEEADIGLE 431 (441)
T ss_pred eeeecc-eEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEec---------CCCCEEEEeCCC-C---CCHHHHHHHHH
Confidence 21 11 12233333211 0 01 23456667789999842 123579997553 2 57999999999
Q ss_pred HHHHHHHH
Q 009673 472 FIHEGVEI 479 (529)
Q Consensus 472 ~i~~~~~~ 479 (529)
.+.+++..
T Consensus 432 ~l~~~l~~ 439 (441)
T PRK05769 432 ILEEAIKE 439 (441)
T ss_pred HHHHHHHH
Confidence 99998863
No 344
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.24 E-value=6.1e-09 Score=110.45 Aligned_cols=321 Identities=13% Similarity=0.056 Sum_probs=174.1
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
.-.|+|.+|+...+.+ ....... .+. ++ ... ...+++.+.+....+ -....+||++|+..++....
T Consensus 60 h~~p~v~~ai~~q~~~-~~~~~~~--~~~-~~---~~~-~lae~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~~ 128 (429)
T PRK06173 60 YNHPRLNAAATNQLAK-MSHIMFG--GFT-HE---PAV-ELAQKLLEILPPSLN---KIFFADSGSVAVEVAMKMALQYQ 128 (429)
T ss_pred CCCHHHHHHHHHHHHh-cCCcccc--ccC-CH---HHH-HHHHHHHhhCCCCcC---EEEEeCCchHHHHHHHHHHHHHH
Confidence 3468888888876643 2110000 011 11 112 223566666642222 13456899999998876432
Q ss_pred ----CCC-CEEEEcCCCCCccccccccccccccccccc-------------eEEEEEcccCCCC---CCCCHHHHHHHhh
Q 009673 190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDEST---GLVDYDMLEKTAI 248 (529)
Q Consensus 190 ----~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~-------------~~~~v~~~v~~~~---~~iD~d~le~~i~ 248 (529)
++| .+|+...-.|-|. +.+ ..+..+. ....++++..... ..-+++.+++.+.
T Consensus 129 ~~~g~~~r~~ii~~~~~yHG~-t~~------a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~ 201 (429)
T PRK06173 129 QAKGEVQRTKFATIRSGYHGD-TWH------AMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLE 201 (429)
T ss_pred HHhCCCCCcEEEEECCCcCCc-chh------hhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHH
Confidence 133 4687777554332 111 1111110 0111222211000 0114566777775
Q ss_pred hc--CCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEecccccc
Q 009673 249 LF--RPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSL 316 (529)
Q Consensus 249 ~~--~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l 316 (529)
.+ +..+||+.. ...++ ..-+++++++|++||+++|+|++| .|+--.|.. ..-+. ..|+++ +.|.+
T Consensus 202 ~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDiv~--~gK~l 278 (429)
T PRK06173 202 QKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TGFGRTGKLFALEHAGVVPDIMC--IGKAL 278 (429)
T ss_pred hCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cCCCcCCcchHHHhcCCCCCEEE--eehhh
Confidence 32 455677664 22222 223889999999999999999998 674222211 01111 368887 56998
Q ss_pred cCC--CCeEEEeeCCCcchhHHHhhhccc-----ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 009673 317 RGP--RGGMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 389 (529)
Q Consensus 317 ~Gp--rgG~i~~~~~~~~~~~l~~~i~~~-----~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~ 389 (529)
.|. ..+.++.++ ++.+.+... ....+.++ +...+++..++|+.+.+. +..+++.++.++|.+.
T Consensus 279 ~gG~~p~~a~~~~~------~i~~~~~~~~~~~~~~~~T~~g-~p~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~ 348 (429)
T PRK06173 279 TGGYLTLSATITTE------AIAQTICSGEAKCFMHGPTFMA-NPLACAIAAESIRLLLES---PWQQNIQRIEAQLKQE 348 (429)
T ss_pred hCCccccceEEecH------HHHHHHhcCCCCccccCCCCCc-CHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHH
Confidence 432 456666666 555554321 11122333 333444444467766543 3466777778888888
Q ss_pred HHhc-CcEEecC-CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673 390 LVEL-GYKLVSG-GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 467 (529)
Q Consensus 390 L~~~-G~~v~~~-gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~ 467 (529)
|++. +++.+.. .....+.-+.+... .+...+.+.|.+.||.+... ...||+. |.++ ++++|++
T Consensus 349 L~~~~~~~~v~~vRg~Gl~~~iel~~~-~~~~~i~~~l~e~Gi~v~~~----------g~~l~~~-Ppl~---it~~ei~ 413 (429)
T PRK06173 349 LAPAAEFDSVAEVRVLGAIGVVEMKEP-VNMATLQPRFVEHGIWVRPF----------GKLVYIM-PPFI---ISPDELS 413 (429)
T ss_pred HHHhhcCCCeeeeeccceEEEEEeCCc-ccHHHHHHHHHHCCeEEEec----------CCEEEEe-CCcc---CCHHHHH
Confidence 8763 4443321 01234444555422 23456788888899998431 1479996 4455 6799999
Q ss_pred HHHHHHHHHHHH
Q 009673 468 AIADFIHEGVEI 479 (529)
Q Consensus 468 ~la~~i~~~~~~ 479 (529)
++.+.|.+++..
T Consensus 414 ~~~~~l~~~l~~ 425 (429)
T PRK06173 414 QLTSGLLRVLKQ 425 (429)
T ss_pred HHHHHHHHHHHH
Confidence 999999999864
No 345
>PRK06062 hypothetical protein; Provisional
Probab=99.21 E-value=3.3e-08 Score=105.65 Aligned_cols=321 Identities=13% Similarity=0.060 Sum_probs=164.2
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCC
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 191 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~p 191 (529)
.-.|+|.+|+...+.. .....+ . +. ++ ... ...+++.+++.-..+. ....+|||+|+..++... .-.
T Consensus 69 h~~p~v~~Ai~~q~~~-~~~~~~--~-~~-~~---~~~-~lae~L~~~~p~~~~~---v~f~~SGsEAve~AlklAr~~t 136 (451)
T PRK06062 69 HQHPKVVAAIQEQAAR-LCTVAP--A-HA-ND---ARS-EAARLIAERAPGDLSK---VFFTNGGADANEHAVRMARLHT 136 (451)
T ss_pred CCCHHHHHHHHHHHHh-cCCcCC--c-cC-CH---HHH-HHHHHHHHhCCCCCCE---EEEcCChHHHHHHHHHHHHHhh
Confidence 3478899888877643 221111 1 11 12 112 2236666766432221 245689999999888643 223
Q ss_pred C-CEEEEcCCCCCccccccccccccccccccc-----------eEEEEEcccCC-CCC--CCC-------HHHHHHHhhh
Q 009673 192 H-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----------YFESMPYRLDE-STG--LVD-------YDMLEKTAIL 249 (529)
Q Consensus 192 G-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~-----------~~~~v~~~v~~-~~~--~iD-------~d~le~~i~~ 249 (529)
| .+|+...-.|-|... + .++..+. .+..++++... ..+ .-| ++.+++++..
T Consensus 137 gr~~ii~~~~~yHG~t~-~------als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~ 209 (451)
T PRK06062 137 GRPKVLSAYRSYHGGTG-S------AINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIEL 209 (451)
T ss_pred CCceEEEEeCCCCCCCH-H------HHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHh
Confidence 3 567776644322210 0 0111110 00111111100 000 012 5777887753
Q ss_pred c---CCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEeccccccc
Q 009673 250 F---RPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR 317 (529)
Q Consensus 250 ~---~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l~ 317 (529)
. ++.+||+.. .+.+...+ +++++++|++||+++|+|++|. |+--.|.. ..-+. ..|++++ .|.|+
T Consensus 210 ~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGRtG~~~a~~~~gv~PDi~t~--gK~lg 286 (451)
T PRK06062 210 EGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMA-GFGRTGKWFAIEHFGVVPDLITF--AKGVN 286 (451)
T ss_pred cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeecccc-CCCcCcHHHHHHhcCCCCCeeee--chhhh
Confidence 2 345677652 22222444 8999999999999999999975 43111110 00011 3687765 59996
Q ss_pred CC--CCeEEEeeCCCcchhHHHhhhcccc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH-HHHHHHHHh
Q 009673 318 GP--RGGMIFFKKDPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC-RALASRLVE 392 (529)
Q Consensus 318 Gp--rgG~i~~~~~~~~~~~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a-~~l~~~L~~ 392 (529)
|. ..|.+++++ ++.+.+.... ...+.++. ...+++..++|+.+.+++ ..+++.+.. ++|.+.|++
T Consensus 287 gG~~Pigav~~~~------~i~~~~~~~~~~~~~T~~gn-pl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l~~~L~~ 356 (451)
T PRK06062 287 SGYVPLGGVAISE------AIAATFADRPYPGGLTYSGH-PLACAAAVATINAMEEEG---IVENAARIGAEVLGPGLRE 356 (451)
T ss_pred cCCcCcEEEEEcH------HHHHHhccCCCCCCCCCCCC-HHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHH
Confidence 52 456666666 5666554321 12234443 334444344677665443 344444443 355555554
Q ss_pred c--CcEEec--CCCCCceEEEccCCC-----CCc--------HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCC
Q 009673 393 L--GYKLVS--GGSDNHLVLVDLRPM-----GID--------GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPA 455 (529)
Q Consensus 393 ~--G~~v~~--~gt~~~~~~v~~~~~-----~i~--------~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~ 455 (529)
. .+.++. .|. ..+.-+.+... ..+ ...+.+.|.+.||.+.. + .+.+||..|.
T Consensus 357 l~~~~~~v~~vrG~-Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~---~-------~~~lrl~ppl 425 (451)
T PRK06062 357 LAERHPSVGEVRGL-GVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFV---N-------GNRIHVVPPC 425 (451)
T ss_pred HHhcCCcEEeEecc-ccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEee---c-------CCEEEEECCc
Confidence 1 222221 111 12222222110 001 23567778889998732 1 2469997553
Q ss_pred CccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 456 MTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 456 ~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
+ ++++|++++.+.+.+++...
T Consensus 426 -~---~t~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 426 -T---VTEDEVREGLAILDAALAVA 446 (451)
T ss_pred -c---CCHHHHHHHHHHHHHHHHHh
Confidence 3 56999999999999988643
No 346
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.19 E-value=5.7e-08 Score=104.05 Aligned_cols=315 Identities=16% Similarity=0.091 Sum_probs=162.5
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCCC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~pG 192 (529)
-.|.|.+++...+......+. .++ .++| ..+++.+.+.. .+. ....+|||+|+..++... .-.|
T Consensus 116 ~~p~v~~av~~ql~~~~~~~~-------~~~--~~~~--lAe~l~~~~p~-~~~---v~f~~SGsEA~e~AlklAR~~tg 180 (474)
T PLN02482 116 ADDEVLAALAETMKKGTSFGA-------PCL--LENV--LAEMVIDAVPS-VEM---VRFVNSGTEACMGVLRLARAYTG 180 (474)
T ss_pred CCHHHHHHHHHHHhhCCCCCC-------CCH--HHHH--HHHHHHHhCCC-CCE---EEEeCChHHHHHHHHHHHHHhcC
Confidence 479999999888754321111 111 2222 33666666632 121 244689999999887643 2223
Q ss_pred -CEEEEcCCCCCccc-ccccccccc--c---cccccceE----EEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcC
Q 009673 193 -DRIMGLDLPHGGHL-SHGFMTPKR--R---VSGTSIYF----ESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGA 259 (529)
Q Consensus 193 -D~Vl~~~~~~~g~~-s~g~~~~~~--~---i~~~g~~~----~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~~~ 259 (529)
++|+...-.|-|+. +.+...... . ....+... ..+.++ .-|++++++.+..+ +..+||+..
T Consensus 181 r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~nd~~~l~~~l~~~~~~iAavI~Ep 254 (474)
T PLN02482 181 REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAP------YNDLEAVKKLFEANKGEIAAVILEP 254 (474)
T ss_pred CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEec------CCChHHHHHHHHhCCCceEEEEECC
Confidence 57777664432221 000000000 0 00000000 011111 12788999888643 345666652
Q ss_pred --CCCCCCCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CCCCC-cccEEEecccccccC-CCCeEEEeeCCC
Q 009673 260 --SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDP 330 (529)
Q Consensus 260 --s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~~~-~aDiv~~S~hK~l~G-prgG~i~~~~~~ 330 (529)
++.+...+ +++++++|++||+++|+|++| .|+-..... ..-+. ..|++++ .|.++| ...|.+++++
T Consensus 255 v~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~-tGfR~g~~ga~~~~gv~PDi~t~--gK~lggG~Pigav~g~~-- 329 (474)
T PLN02482 255 VVGNSGFIVPKKEFLEGLREITKENGALLVFDEVM-TGFRIAYGGAQEYFGITPDLTTL--GKVIGGGLPVGAYGGRR-- 329 (474)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCeecCcchHhHHhCCCCCEEEe--cchhhCCCceEEEEEcH--
Confidence 22222222 678999999999999999998 565221100 00011 3688654 699954 3456667777
Q ss_pred cchhHHHhhhccc--c-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----CcEEecCCCC
Q 009673 331 VLGVELESAINNA--V-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GYKLVSGGSD 403 (529)
Q Consensus 331 ~~~~~l~~~i~~~--~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~----G~~v~~~gt~ 403 (529)
++.+.+... . ..++.++ +...+++..++|+.+.++ +..+++.++.++|.+.|++. |++++..+-.
T Consensus 330 ----ei~~~~~~~~~~~~~~T~~g-npl~~aAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~ 401 (474)
T PLN02482 330 ----EIMEMVAPAGPMYQAGTLSG-NPLAMTAGIHTLKRLQQP---GTYEYLDKITKKLIQGILEAGKKAGHEMCGGYIS 401 (474)
T ss_pred ----HHHHhhccCCCcccccCcch-hHHHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccc
Confidence 676666421 1 1122222 233344433467766543 34566677777888877663 4444321111
Q ss_pred CceEEEccCCC---------CCc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673 404 NHLVLVDLRPM---------GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 471 (529)
Q Consensus 404 ~~~~~v~~~~~---------~i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~ 471 (529)
. ++-+.+... .-+ ...+.+.|.++||.+.....| . +++.+ .++++|++++++
T Consensus 402 g-~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~--------~----~~psl---~ht~~dId~~l~ 465 (474)
T PLN02482 402 G-MFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFE--------A----GFTSL---AHTEEDIDFTIA 465 (474)
T ss_pred e-EEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCC--------C----CcCCC---CCCHHHHHHHHH
Confidence 1 221111110 011 124566677899998542111 0 11222 378999999999
Q ss_pred HHHHHHH
Q 009673 472 FIHEGVE 478 (529)
Q Consensus 472 ~i~~~~~ 478 (529)
.+++++.
T Consensus 466 al~~~l~ 472 (474)
T PLN02482 466 AAERVLA 472 (474)
T ss_pred HHHHHHH
Confidence 9998875
No 347
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.17 E-value=5.8e-08 Score=103.90 Aligned_cols=321 Identities=17% Similarity=0.119 Sum_probs=167.7
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cCC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~p 191 (529)
-.|.|.+|+...+. ++..+ ..++. ++...+ ..++++++++-..+ .....+||++|+.+++... ...
T Consensus 88 ~~p~v~~Ai~~ql~-~~~~~--~~~~~--~~~~~~----lae~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~tg 155 (459)
T PRK06082 88 GHPHVIEKVKEQMA-KLPFS--PRRFT--NETAIE----CAEKLTEIAGGELN---RVLFAPGGTSAIGMALKLARHITG 155 (459)
T ss_pred CCHHHHHHHHHHHH-hCCCc--cCccC--CHHHHH----HHHHHHHhCCCCCC---EEEECCCcHHHHHHHHHHHHHhcC
Confidence 47899999887775 33221 11221 222222 33677777753322 2355689999999887643 122
Q ss_pred CCEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCCC-CC-CC------CHHHHHHHhhhc-
Q 009673 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES-TG-LV------DYDMLEKTAILF- 250 (529)
Q Consensus 192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~------------~~~~v~~~v~~~-~~-~i------D~d~le~~i~~~- 250 (529)
..+|+...-.|-|.- .+ .+++.+. .+..++.+.... .+ .. +++.+++.+...
T Consensus 156 r~~ii~~~~~yHG~t-~~------a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 228 (459)
T PRK06082 156 NFKVVSLWDSFHGAS-LD------AISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEG 228 (459)
T ss_pred CCEEEEEeCCCcCcc-HH------HHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCC
Confidence 367777764432221 00 1111110 011122111000 00 01 135577777531
Q ss_pred CCcEEEEcCC-CCCC-CCC---HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccccCC--C
Q 009673 251 RPKLIIAGAS-AYPR-DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP--R 320 (529)
Q Consensus 251 ~pklIi~~~s-~~p~-~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~Gp--r 320 (529)
+..+||+..- +.+. ..+ +++++++|++||+++|+|++|. |+--.|.. . .-+. ..|+++ +.|.++|. .
T Consensus 229 ~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~~P 305 (459)
T PRK06082 229 GIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPN-GMGRTGEWFTHQAYGIEPDILC--IGKGLGGGLVP 305 (459)
T ss_pred CEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhhHhHhhCCCCCEEE--ecccccCCCCc
Confidence 3456666521 1112 233 8999999999999999999975 43111210 0 0011 368887 56999652 4
Q ss_pred CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEe
Q 009673 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLV 398 (529)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~ 398 (529)
.|.+++++ ++..........++.+++... .++..+.|+.+..+ +..+++.++.++|.+.|++. .+.++
T Consensus 306 ~~av~~~~------~i~~~~~~~~~~~T~~gnpl~-~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i 375 (459)
T PRK06082 306 IAAMITKD------KYNTAAQISLGHYTHEKSPLG-CAAALATIEVIEQE---GLLEKVKADSQFMRERLLEMKAKYPLI 375 (459)
T ss_pred ceEEEEcH------HHHhhccCCCCCCCCCcCHHH-HHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 57777776 454333221111233443333 33333457665443 34666777777888877662 22222
Q ss_pred cC--CCCCceEEEccCCC----CCc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673 399 SG--GSDNHLVLVDLRPM----GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 469 (529)
Q Consensus 399 ~~--gt~~~~~~v~~~~~----~i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~l 469 (529)
.. |. .-+.-+.+... .-+ ...+...+.+.||.+... ....||+..| ++ ++++|++++
T Consensus 376 ~~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---------~~~~i~~~Pp-l~---it~~eid~~ 441 (459)
T PRK06082 376 GDVRGI-GLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVS---------QGNVIQLSPP-LI---ITREELTQA 441 (459)
T ss_pred eeeeec-cceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEec---------CCCEEEEeCC-Cc---cCHHHHHHH
Confidence 21 11 12223333211 001 234556667899988431 1357999754 43 569999999
Q ss_pred HHHHHHHHHHH
Q 009673 470 ADFIHEGVEIT 480 (529)
Q Consensus 470 a~~i~~~~~~~ 480 (529)
++.+++++...
T Consensus 442 ~~~l~~~l~~~ 452 (459)
T PRK06082 442 LAILEEAIAKI 452 (459)
T ss_pred HHHHHHHHHHH
Confidence 99999998643
No 348
>PRK07678 aminotransferase; Validated
Probab=99.16 E-value=6.4e-08 Score=103.47 Aligned_cols=325 Identities=19% Similarity=0.146 Sum_probs=166.1
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
.-.|+|.+|+...+..- . +... .+ .++. .+ ...+++.++++... .....+||++|+..++....
T Consensus 63 h~~p~v~~ai~~q~~~~-~--~~~~-~~-~~~~--~~--~lae~l~~~~~~~~----~v~f~~sGseA~e~AlklAr~~t 129 (451)
T PRK07678 63 YGRKELAEAAYEQLKTL-S--YFPL-TQ-SHEP--AI--KLAEKLNEWLGGEY----VIFFSNSGSEANETAFKIARQYH 129 (451)
T ss_pred CCCHHHHHHHHHHHHhc-C--cccc-cc-CCHH--HH--HHHHHHHHhCCCCC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 34688888888776532 1 1110 11 1221 22 23367777775432 12446899999998876431
Q ss_pred ----CCC-CEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCC-CCC-----CCC---HHHH
Q 009673 190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDE-STG-----LVD---YDML 243 (529)
Q Consensus 190 ----~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~------------~~~~v~~~v~~-~~~-----~iD---~d~l 243 (529)
+|| .+|+...-.|-|... + .+...+. .+..++++... ..+ ..| ++.+
T Consensus 130 ~~~g~~~r~~ii~~~~~yHG~t~-~------als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 202 (451)
T PRK07678 130 AQKGEPHRYKFISRYRAYHGNSM-G------ALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEI 202 (451)
T ss_pred HhcCCCCCcEEEEECCCcCCccH-H------HhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHH
Confidence 134 578777654422210 0 0111110 01112211000 000 011 2335
Q ss_pred HHHhhh---cCCcEEEEcCC--CCCCCC----CHHHHHHHHHHhCCEEEEecccc-ccccccc-ccCCCCC-cccEEEec
Q 009673 244 EKTAIL---FRPKLIIAGAS--AYPRDF----DYPRMRQIADAVGALLMMDMAHI-SGLVAAS-VVADPFK-YCDVVTTT 311 (529)
Q Consensus 244 e~~i~~---~~pklIi~~~s--~~p~~~----d~~~i~~ia~~~g~~livD~ah~-~Gli~~~-~~~~~~~-~aDiv~~S 311 (529)
++.+.. .++.+||+..- +.+... -+++++++|++||+++|+|+.+. +|-...- .... +. ..|+++.+
T Consensus 203 ~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~-~gv~PDivt~g 281 (451)
T PRK07678 203 DRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMN-YGVKPDIITMA 281 (451)
T ss_pred HHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHh-cCCCCCEEEee
Confidence 666642 24556777521 222222 38899999999999999999863 3332210 0111 11 36888764
Q ss_pred ccccccC--CCCeEEEeeCCCcchhHHHhhhccc------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673 312 THKSLRG--PRGGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (529)
Q Consensus 312 ~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a 383 (529)
|.|+| ...|.+++++ ++.+.+... ...++.+++.....+++ ++|+.+.+++ ..+++.+..
T Consensus 282 --K~lggG~~Pi~av~~~~------~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~-a~l~~l~~~~---~~~~~~~~g 349 (451)
T PRK07678 282 --KGITSAYLPLSATAVKK------EIYEAFKGKGEYEHFRHVNTFGGNPAACALAL-KNLEIMENEN---LIERSAQLG 349 (451)
T ss_pred --cccccCCcceeEEEEcH------HHHHHHhccCcccccccCCCCCcCHHHHHHHH-HHHHHHHhCC---HHHHHHHHH
Confidence 99854 2567778877 566555421 11223344333333333 4677665433 455666667
Q ss_pred HHHHHHHHhc--CcEEec--CCCCCceEEEccCCC-----CCc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEE
Q 009673 384 RALASRLVEL--GYKLVS--GGSDNHLVLVDLRPM-----GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRI 451 (529)
Q Consensus 384 ~~l~~~L~~~--G~~v~~--~gt~~~~~~v~~~~~-----~i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRi 451 (529)
++|.+.|++. ...++. .|. ..+.-+.+... ..+ ...+...|.+.||.+... +...+.....|||
T Consensus 350 ~~l~~~l~~~~~~~~~v~~vrg~-Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~---g~~v~~~~~~lrl 425 (451)
T PRK07678 350 ELLLEQLKEELGEHPLVGDIRGK-GLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKN---GDTVAGYNNVLTL 425 (451)
T ss_pred HHHHHHHHHHHhcCCCEEEEEee-ceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeec---CccccCCCCEEEE
Confidence 7777777541 122221 111 12222333210 001 234667778899998532 1100112357999
Q ss_pred ccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 452 GSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 452 g~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+.+.. ++++|++++++.+.+++.
T Consensus 426 ~Ppl~----it~~eid~~~~~l~~~l~ 448 (451)
T PRK07678 426 SPPLV----ISSEEIAFIVGTLKTALE 448 (451)
T ss_pred ECCCc----CCHHHHHHHHHHHHHHHH
Confidence 86643 568999999999998885
No 349
>PRK06149 hypothetical protein; Provisional
Probab=99.15 E-value=3.3e-08 Score=115.00 Aligned_cols=327 Identities=14% Similarity=0.074 Sum_probs=166.6
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH---hhcC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT---AILK 190 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~---all~ 190 (529)
-.|+|.+|+...+..- .. ..++. ++...++ .+++++++.-..+ .....+||++||..++. +..+
T Consensus 600 ~hp~v~~Ai~~q~~~l-~~---~~~~~--~~~~~el----ae~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~tg 666 (972)
T PRK06149 600 GHPRLAAAAARQWSLL-NT---NSRFH--YAAVAEF----SERLAALAPDGLD---TVFLVNSGSEANDLAIRLAWAASG 666 (972)
T ss_pred CCHHHHHHHHHHHHhc-cc---ccccc--CHHHHHH----HHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHhcC
Confidence 4799999998776432 11 12221 2222222 2667777732111 23456899999999887 3333
Q ss_pred CCCEEEEcCCC-CCccccc----ccccccccc--ccccceEEEEEcccC-CCCC-CCC-----HHHHHHHhhh-----cC
Q 009673 191 PHDRIMGLDLP-HGGHLSH----GFMTPKRRV--SGTSIYFESMPYRLD-ESTG-LVD-----YDMLEKTAIL-----FR 251 (529)
Q Consensus 191 pGD~Vl~~~~~-~~g~~s~----g~~~~~~~i--~~~g~~~~~v~~~v~-~~~~-~iD-----~d~le~~i~~-----~~ 251 (529)
..+|+..+-. ||-++.. +........ ...+ ++..++++-. ...+ ..| .+++++.++. .+
T Consensus 667 -r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~-~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 744 (972)
T PRK06149 667 -RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPD-WVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRG 744 (972)
T ss_pred -CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCC-CeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCc
Confidence 3466666544 3322110 000000000 0000 1122221100 0001 011 2444444321 13
Q ss_pred CcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEeccc-ccccccccccC-CCCC-cccEEEecccccccC-CCC
Q 009673 252 PKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAH-ISGLVAASVVA-DPFK-YCDVVTTTTHKSLRG-PRG 321 (529)
Q Consensus 252 pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah-~~Gli~~~~~~-~~~~-~aDiv~~S~hK~l~G-prg 321 (529)
+.+||+.. .+.+...+ +++++++|++||+++|+|++| .+|-....... .-+. ..|++++ .|.++| ...
T Consensus 745 iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~--gK~lg~G~Pl 822 (972)
T PRK06149 745 LAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITM--AKGMGNGHPL 822 (972)
T ss_pred eEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEe--cccccCCeee
Confidence 45666652 22233444 899999999999999999997 34433210000 0011 3688855 599854 345
Q ss_pred eEEEeeCCCcchhHHHhhhcc-cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEe
Q 009673 322 GMIFFKKDPVLGVELESAINN-AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLV 398 (529)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~-~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~ 398 (529)
|++++++ ++.+.+.. ..+....++......+++ +.|+.+.++ +..+++.+..++|.+.|++. .+.++
T Consensus 823 ~av~~~~------~i~~~~~~~~~~~sT~~gnP~~~aaal-a~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i 892 (972)
T PRK06149 823 GAVITRR------EIAEALEAEGYFFSSTGGSPVSCRIGM-AVLDVLREE---KLQENARRVGDHLKARLEALADRHPLI 892 (972)
T ss_pred EEEEEcH------HHHhhhccCCcccCCCCCCHHHHHHHH-HHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 8888887 67666543 222222344344334444 357766543 34555555667777777652 12222
Q ss_pred cC--CCCCceEEEccCCC----CCc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673 399 SG--GSDNHLVLVDLRPM----GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 469 (529)
Q Consensus 399 ~~--gt~~~~~~v~~~~~----~i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~l 469 (529)
.. |. .-+.-+.+... .-+ ...+.+.|.+.||.+... | .....|||. |.++ ++++|++++
T Consensus 893 ~~vrG~-Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~---g----~~~~vl~~~-Ppl~---it~~~id~~ 960 (972)
T PRK06149 893 GAVHGM-GLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPT---G----DHLNILKIK-PPLC---LDRESADFF 960 (972)
T ss_pred EEEeec-ceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeec---C----CCCCEEEEE-CCCc---CCHHHHHHH
Confidence 21 11 12222333110 011 234667778899998532 1 113579986 4444 679999999
Q ss_pred HHHHHHHHHH
Q 009673 470 ADFIHEGVEI 479 (529)
Q Consensus 470 a~~i~~~~~~ 479 (529)
++.+.+++..
T Consensus 961 ~~~l~~~l~~ 970 (972)
T PRK06149 961 VDMLDRVLTE 970 (972)
T ss_pred HHHHHHHHHh
Confidence 9999998863
No 350
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.15 E-value=3.2e-09 Score=102.37 Aligned_cols=227 Identities=22% Similarity=0.264 Sum_probs=142.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCC-CCcccc--cccccc-cccccccc
Q 009673 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP-HGGHLS--HGFMTP-KRRVSGTS 221 (529)
Q Consensus 146 ~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~-~~g~~s--~g~~~~-~~~i~~~g 221 (529)
.|.|| +-+++.||.+..- |.+|..||+.|+..++.++++|||+.|...-. |.. +- -|.... ...+.-.|
T Consensus 67 RdtLe----~vyA~vf~aE~a~--VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDT-LeevIG~rg~~~gSL~dfg 139 (416)
T COG4100 67 RDTLE----RVYAQVFGAEAAL--VRPQIISGTHAIACALFGILRPGDELLYITGSPYDT-LEEVIGLRGEGQGSLKDFG 139 (416)
T ss_pred hhHHH----HHHHHHhccccce--eeeeeecchhHHHHHHHhccCCCCeEEEecCCcchh-HHHHhccCCCCcccHHHhC
Confidence 35566 5688999999763 67888999999999999999999999875411 100 00 000000 00111123
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC-CCC---C--CCCHHHHHHHHHHh--CCEEEEecccccccc
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS-AYP---R--DFDYPRMRQIADAV--GALLMMDMAHISGLV 293 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s-~~p---~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli 293 (529)
..++.++ +. .++.+|++.+...+++ ++|+|.+.-| .|. . +.+++++.++.|+. |+++++|.++. .++
T Consensus 140 i~Y~~v~--Lt-~~gkiD~~~v~~~i~~-~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYG-EFv 214 (416)
T COG4100 140 IKYKAVP--LT-ADGKIDIQAVKTAISD-RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYG-EFV 214 (416)
T ss_pred cceeecc--cc-cCCcccHHHHHHhcCc-cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccch-hhh
Confidence 3334333 43 3589999999999998 9999988632 333 2 44677777777765 68999999843 222
Q ss_pred cccccCCCCC-cccEEEecccccccCC---CCeEEEeeCCCcchhHHHhhhc-ccccCCCCCCChHHHHHHHHHHHHHhc
Q 009673 294 AASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAIN-NAVFPGLQGGPHNHTIGGLAVCLKHAQ 368 (529)
Q Consensus 294 ~~~~~~~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~-~~~~p~~~g~p~~~~iaala~al~~~~ 368 (529)
- ...|.. ++|++.+|+-|.-.|. -||+|.+++ ++.+.-. +...|++. ...-..+. +++++-
T Consensus 215 E---~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~------~~ve~~~yRlTaPGIG-~e~Gat~~----~l~~my 280 (416)
T COG4100 215 E---EKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKA------ELVEAAAYRLTAPGIG-REGGATLY----SLREMY 280 (416)
T ss_pred h---ccCccccchhhhccceeeCCCCceeeccceeechH------HHHHhhceeeecCCcc-ccccccHH----HHHHHH
Confidence 1 123444 8999999999986442 468999988 6766532 23346652 11111122 222222
Q ss_pred CchH---HHHHHHHHHHHHHHHHHHHhcCcEEec
Q 009673 369 SPEF---KVYQNKVVSNCRALASRLVELGYKLVS 399 (529)
Q Consensus 369 ~~~~---~~~~~~i~~~a~~l~~~L~~~G~~v~~ 399 (529)
+++ .....+..+-+......|.+.|+++.+
T Consensus 281 -qGlFlAPhvv~qa~Kga~fta~~le~lg~~~~P 313 (416)
T COG4100 281 -QGLFLAPHVVSQAVKGAHFTARFLEKLGFPVNP 313 (416)
T ss_pred -hhhccchHHHHHHhhhhHHHHHHHHHcCCCCCC
Confidence 222 455666677777777778888998765
No 351
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.15 E-value=2.7e-08 Score=106.14 Aligned_cols=203 Identities=15% Similarity=0.138 Sum_probs=115.9
Q ss_pred CCcEEEEcC-CCCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccc-cCCC
Q 009673 251 RPKLIIAGA-SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSL-RGPR 320 (529)
Q Consensus 251 ~pklIi~~~-s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l-~Gpr 320 (529)
+..+|++.. .++++ ..-+++++++|++||+++|+|+.+ .|+-..+.. . .-+. ..|+++ +.|.+ .|.+
T Consensus 206 ~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~-tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~~G~P 282 (442)
T TIGR00709 206 KPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQ-AGFGRSGTMFAFEHAGIEPDFVV--MSKAVGGGLP 282 (442)
T ss_pred ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCCCCchhHHHHcCCCCcEEE--EcccccCCcc
Confidence 455666652 33333 224889999999999999999985 344222211 0 0011 368888 46998 4567
Q ss_pred CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEe
Q 009673 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLV 398 (529)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~ 398 (529)
.|++++++ ++ +.+.......+.++.... .++..++|+.+.+.+ ..+++.++.++|.+.|++. .+.++
T Consensus 283 igav~~~~------~~-~~~~~~~~~~T~~gnpla-~aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v 351 (442)
T TIGR00709 283 LAVLLIAP------EF-DAWQPAGHTGTFRGNQLA-MVTGTEALNYWKDDN---LAQNAQERGERITSFLDDMIKEHPCI 351 (442)
T ss_pred cEEEEEch------HH-hccCCCcCCCCCCcCHHH-HHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 78888877 53 333222222333443333 333334676655433 4556666777777777652 23322
Q ss_pred cC--CCCCceEEEccCCCC----------Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCH
Q 009673 399 SG--GSDNHLVLVDLRPMG----------ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE 463 (529)
Q Consensus 399 ~~--gt~~~~~~v~~~~~~----------i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~ 463 (529)
.. | ..-+.-+.+.... .+ ...+...+.+.||.+... + .....||+..| ++ +++
T Consensus 352 ~~vrG-~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---~----~~~~~l~~~Pp-l~---it~ 419 (442)
T TIGR00709 352 GNVRG-RGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETG---G----REGEVFRLLCP-IT---IDQ 419 (442)
T ss_pred eeeec-cceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeec---C----CCCCEEEEECC-CC---CCH
Confidence 21 1 1122223332110 01 234666677899998431 1 12357898644 44 679
Q ss_pred HHHHHHHHHHHHHHHH
Q 009673 464 KEFVAIADFIHEGVEI 479 (529)
Q Consensus 464 ~d~~~la~~i~~~~~~ 479 (529)
+|++++++++.+++..
T Consensus 420 ~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 420 EECEEGISRFKQAVEE 435 (442)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999864
No 352
>PRK05965 hypothetical protein; Provisional
Probab=99.14 E-value=4.5e-08 Score=104.80 Aligned_cols=329 Identities=14% Similarity=0.073 Sum_probs=167.1
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---- 189 (529)
-.|+|.+|+...+.+ ...... .+...++ ...+ ..+++.+++..+.+ .....+|||+|+.+++....
T Consensus 63 ~~p~i~~Ai~~q~~~-~~~~~~--~~~~~~~---~~~~-lae~L~~~~p~~~~---~v~f~~sGSEAve~AlKlAr~~~~ 132 (459)
T PRK05965 63 GQESIVEAAAEQMRE-LPYATG--YFHFGSE---PAIR-LAAKLAERAPGSLN---HVYFTLGGSDAVDSAVRFIRHYWN 132 (459)
T ss_pred CCHHHHHHHHHHHHh-cCCccc--ccccCCH---HHHH-HHHHHHhhCCCCcC---EEEEeCChhHHHHHHHHHHHHHHH
Confidence 478899998887753 211000 0000111 1122 33666676642222 12445789999998876431
Q ss_pred ---CCC-CEEEEcCCCCCccccc-----cccccccccccccceEEEEEcccCC-CCCCCC--------HHHHHHHhhhc-
Q 009673 190 ---KPH-DRIMGLDLPHGGHLSH-----GFMTPKRRVSGTSIYFESMPYRLDE-STGLVD--------YDMLEKTAILF- 250 (529)
Q Consensus 190 ---~pG-D~Vl~~~~~~~g~~s~-----g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD--------~d~le~~i~~~- 250 (529)
++| .+|+...-.|-|.-.. +...+.......-.+...++++... ....-| ++++++.+...
T Consensus 133 ~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 212 (459)
T PRK05965 133 ATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELG 212 (459)
T ss_pred hcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcC
Confidence 133 5788777654222100 0000000000000001122222100 001123 25677777532
Q ss_pred --CCcEEEEcCC-CC-CC----CCCHHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEecccccccCC
Q 009673 251 --RPKLIIAGAS-AY-PR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLRGP 319 (529)
Q Consensus 251 --~pklIi~~~s-~~-p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l~Gp 319 (529)
+..+||+..- .. +. ..-+++++++|++||+++|+|+.+. |+--.|.. ..-+. ..|+++.+ |.|+|.
T Consensus 213 ~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG 289 (459)
T PRK05965 213 ADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVIT-GFGRTGPLFACEAEGVVPDLMTVA--KGLTSG 289 (459)
T ss_pred CCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-cCccCchhhhHhhcCCCCCeEEec--hhhccC
Confidence 3456676521 11 11 2237899999999999999999853 33111110 00011 36899876 998553
Q ss_pred --CCeEEEeeCCCcchhHHHhhhccc-------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673 320 --RGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (529)
Q Consensus 320 --rgG~i~~~~~~~~~~~l~~~i~~~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L 390 (529)
..|.+++++ ++.+.+... ...++.++......+++ +.|+.+.++ +..+++.+..++|.+.|
T Consensus 290 ~~Pi~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~-a~L~~l~~~---~l~~~~~~~g~~l~~~l 359 (459)
T PRK05965 290 YVPMGAVLMSD------HVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGL-EVLRLYHEG---GLLANGQKAGPRFAAGL 359 (459)
T ss_pred CcceeEEEEcH------HHHHHHhccccccccccccCCCCCCHHHHHHHH-HHHHHHHhc---cHHHHHHHHHHHHHHHH
Confidence 567778877 566555321 11223334333333333 357766543 34556666677777777
Q ss_pred Hhc-CcEEecC--CCCCceEEEccCCC-----C--Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCc
Q 009673 391 VEL-GYKLVSG--GSDNHLVLVDLRPM-----G--ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMT 457 (529)
Q Consensus 391 ~~~-G~~v~~~--gt~~~~~~v~~~~~-----~--i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~t 457 (529)
++. .+.++.. |. ..+.-+.+... . .+ ...+.+.+.+.||.+... +...||+.-| ++
T Consensus 360 ~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~---------g~~~i~~~Pp-L~ 428 (459)
T PRK05965 360 DALRAHPLVGDVRGR-GLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAF---------GDGVLGFAPA-LC 428 (459)
T ss_pred HhhccCCCEEEEeec-ceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEec---------CCcEEEEECC-Cc
Confidence 662 1222221 11 12222333210 0 01 234666777899998421 2356898744 44
Q ss_pred cCCCCHHHHHHHHHHHHHHHHH
Q 009673 458 TRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 458 t~g~~~~d~~~la~~i~~~~~~ 479 (529)
++++|++++++.+.+++..
T Consensus 429 ---it~~ei~~~~~~l~~~l~~ 447 (459)
T PRK05965 429 ---CTEGEFDLIFERTRKTLDD 447 (459)
T ss_pred ---CCHHHHHHHHHHHHHHHHH
Confidence 6799999999999999974
No 353
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.14 E-value=5.4e-09 Score=104.30 Aligned_cols=333 Identities=13% Similarity=0.134 Sum_probs=189.3
Q ss_pred ceeEecCCCCCcHHHHHHHhhhhhccCCCCCC-CCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (529)
Q Consensus 104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p-~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~ 182 (529)
..++.+++.-+|++|++.....+.+-...|+. ..+...+.++...++ .+++.+.++++++.+ +.+.+...+++.+..
T Consensus 6 ~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~-~a~~~lreLl~iPd~-Y~VlflqGGat~qf~ 83 (365)
T COG1932 6 VYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLE-EAEKDLRELLNIPDD-YKVLFLQGGATGQFA 83 (365)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHH-HHHHHHHHHhCCCCC-ceEEEEcCccHHHHH
Confidence 35666777778999999988777654443432 122222334444444 466899999999975 334444455557788
Q ss_pred HHHHhhcCCCCE--EEEcCCCCCccccccccccccccccccceEEEEEcc-cCC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 183 EVYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR-LDE-STGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 183 ~~l~all~pGD~--Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~-v~~-~~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
++.+.|+..+.. |...... ..+.. .+...+....+.... ... -...+|++... +.+ +...|..+
T Consensus 84 ~~p~nLl~~~~~~yv~~g~Ws---~~a~~------eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~-~~ayv~~~ 151 (365)
T COG1932 84 MAPMNLLGKRGTDYVDTGAWS---EFAIK------EAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSD-NDAYVHFC 151 (365)
T ss_pred HHHHhhhcccCceeEeeeehh---HhHHH------HHHHhcccccccccceeccCccCCCChhhcc--cCC-CccEEEEe
Confidence 888898866543 4433211 11101 111111100110000 000 11344555432 222 22225444
Q ss_pred CCC--CCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhH
Q 009673 259 ASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVE 335 (529)
Q Consensus 259 ~s~--~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~ 335 (529)
+.+ .+..++ ..-.+.. +.++++|++. ++... +.++..-|++.++.+|.+ ||-| ++++.++ +
T Consensus 152 ~NeTi~Gv~v~--~~p~~~~--~~~~v~D~SS--~ilsr---~iDvsk~dviyagaQKnl-GpaGltvvIvr~------~ 215 (365)
T COG1932 152 WNETISGVEVP--ELPDIGS--DGLLVADASS--AILSR---PIDVSKYDVIYAGAQKNL-GPAGLTVVIVRP------D 215 (365)
T ss_pred cCCcccceEcc--CCCCCCC--CceEEEeccc--HHhcC---CCChhHcceEEEehhhcc-CccceEEEEEcH------H
Confidence 222 222222 1111111 2899999863 32211 222335689999999998 7777 8999988 5
Q ss_pred HHhhhcccccC------------CCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhcCcEEe--cC
Q 009673 336 LESAINNAVFP------------GLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLV--SG 400 (529)
Q Consensus 336 l~~~i~~~~~p------------~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~G~~v~--~~ 400 (529)
+.+++.....| .+..+|....+.-+..+|+.+...+ .+...++-.++++.|.+.+.+.+|-.. .+
T Consensus 216 ~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~ 295 (365)
T COG1932 216 LLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAK 295 (365)
T ss_pred HHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccch
Confidence 66655443122 1245777777777777788776555 588889999999999999988765321 22
Q ss_pred CCCCce-EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 401 GSDNHL-VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 401 gt~~~~-~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
...+.+ +.+++....++ ..+.+.++++|+...++ +. ..+|+|++.- + .+..++++.|+++++.+..
T Consensus 296 ~~RS~mnV~f~~~~~~ld-~~fv~eae~~gl~~lkG----hr---~vgGmRasiy--n--A~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 296 ANRSRMNVTFTLVDAELD-KGFVAEAEAAGLIYLKG----HR---SVGGLRASIY--N--AVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred hhccceeEEEEcCcHHHH-HHHHHHHHHcCCceecc----cc---CCCceeeeee--c--CCCHHHHHHHHHHHHHHHH
Confidence 222333 34455444444 33455566777776443 32 3578999863 2 2678999999999988765
No 354
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.14 E-value=5e-08 Score=103.37 Aligned_cols=208 Identities=13% Similarity=0.062 Sum_probs=123.5
Q ss_pred HHHHHHhhhcCCcEEEEcCC--CCC-----CCCCHHHHHHHHHHhCCEEEEeccccccccccccc-CC-CCC-cccEEEe
Q 009673 241 DMLEKTAILFRPKLIIAGAS--AYP-----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTT 310 (529)
Q Consensus 241 d~le~~i~~~~pklIi~~~s--~~p-----~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~-~~~-~aDiv~~ 310 (529)
+.+++.+.+ +..+||+..- ..+ ....+++++++|++||+++|+|++| .|+--.|.. .. -.. ..|+++
T Consensus 191 ~~~~~~~~~-~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDi~t- 267 (422)
T PRK05630 191 RSLELLIDE-TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIA-TGFGRTGELFATLAAGVTPDIMC- 267 (422)
T ss_pred HHHHHHHhh-ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecce-eCCCcCchhhHHHhcCCCCCeee-
Confidence 345555544 6777777641 222 1335889999999999999999997 554212210 00 011 357885
Q ss_pred cccccccC--CCCeEEEeeCCCcchhHHHhhhccc------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673 311 TTHKSLRG--PRGGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (529)
Q Consensus 311 S~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~ 382 (529)
+.|.++| +.+|++++++ ++.+.+... ....+.++ +...+++...+|+.+.+.+ ..+++.++
T Consensus 268 -~gK~l~gG~~p~~av~~~~------~i~~~~~~~~~~~~~~h~~T~~g-~Pla~aaa~aaL~~l~~~~---~~~~~~~~ 336 (422)
T PRK05630 268 -VGKALTGGFMSFAATLCTD------KVAQLISTPNGGGALMHGPTFMA-NPLACAVAHASLEIIETGM---WRKQVKRI 336 (422)
T ss_pred -eechhhcCccccceeeccH------HHHHHHhccCCCCccccCCCCcC-CHHHHHHHHHHHHHHHhCc---HHHHHHHH
Confidence 4699955 5788888887 566655321 11122333 3334444445677765433 34566666
Q ss_pred HHHHHHHHHhc-CcEEecC--CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccC
Q 009673 383 CRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTR 459 (529)
Q Consensus 383 a~~l~~~L~~~-G~~v~~~--gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~ 459 (529)
.++|.+.|++. ....+.+ | ...+.-+.+... .+...+.+.|.+.||.+... ...+|+. |.++
T Consensus 337 g~~l~~~L~~l~~~~~v~~vRg-~Gl~~~ie~~~~-~~~~~~~~~~~~~Gl~~~~~----------g~~l~~~-PpL~-- 401 (422)
T PRK05630 337 EAELIAGLSPLAHLPGVADVRV-LGAIGVVEMEQP-VDMEEATQAAVDHGVWLRPF----------GRLVYVM-PPYI-- 401 (422)
T ss_pred HHHHHHHHHHhhcCCCeeeeec-cccEEEEEECCc-ccHHHHHHHHHHCCeEEEec----------CCEEEEE-CCcc--
Confidence 77777777642 1222221 1 123344444321 13456777888899998421 2468986 4455
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 009673 460 GFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 460 g~~~~d~~~la~~i~~~~~ 478 (529)
++++|++++.+.+++++.
T Consensus 402 -it~~~i~~~~~~l~~al~ 419 (422)
T PRK05630 402 -TTSEQIAQICAALAAAVK 419 (422)
T ss_pred -CCHHHHHHHHHHHHHHHh
Confidence 679999999999999886
No 355
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.13 E-value=4e-08 Score=104.51 Aligned_cols=310 Identities=15% Similarity=0.131 Sum_probs=162.2
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCC
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 191 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~p 191 (529)
.-.|.|.+|+...+..... +. .....+++ ..+++.+++... + .....+||++|+..++... .-.
T Consensus 64 h~~p~v~~Ai~~q~~~~~~--------~~-~~~~~~~~--la~~l~~~~p~~-~---~v~f~~sGseA~e~AlklAr~~t 128 (431)
T PRK06209 64 HAYPPVVEAVREALQDGCN--------FT-RPSAIELD--AAESFLELIDGA-D---MVKFCKNGSDATSAAVRLARAYT 128 (431)
T ss_pred CCCHHHHHHHHHHHHhCcC--------CC-CCCHHHHH--HHHHHHHhCCcc-c---eEEEecCHHHHHHHHHHHHHHHh
Confidence 3478888888877753221 11 11112222 236677766321 1 1245689999999888743 223
Q ss_pred CC-EEEEcC--CCCCcc-ccccccccccccccccce----EEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcC--
Q 009673 192 HD-RIMGLD--LPHGGH-LSHGFMTPKRRVSGTSIY----FESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGA-- 259 (529)
Q Consensus 192 GD-~Vl~~~--~~~~g~-~s~g~~~~~~~i~~~g~~----~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~~~-- 259 (529)
|. +|+... .-|+.+ ..|+.. .. ..+.. ..+..++ .-|++++++.++.. +..+|++..
T Consensus 129 gr~~i~~~~~~~~h~~~~~~~g~~----~~-~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~~~aavi~Epv~ 197 (431)
T PRK06209 129 GRDLVARCADHPFFSTDDWFIGTT----PM-SAGIPASVSALTVTFR------YNDIASLEALFEDHPGRIACVILEPAT 197 (431)
T ss_pred CCCeEEEeccCccccccccccccC----CC-CCCCChhHhccccccC------CCCHHHHHHHHHhCCCCEEEEEEcccc
Confidence 43 455441 111101 011110 00 00100 0111111 23789999888642 345666642
Q ss_pred CCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccc-cCCCCC-cccEEEecccccccC-CCCeEEEeeCCCcchhHH
Q 009673 260 SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVLGVEL 336 (529)
Q Consensus 260 s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~~~-~aDiv~~S~hK~l~G-prgG~i~~~~~~~~~~~l 336 (529)
+..|....+++|+++|++||+++|+|++| .|+...+. ...-+. ..|+++ +.|.++| ..+|++++++ ++
T Consensus 198 g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv~PDi~t--~gK~lggG~p~~av~~~~------~i 268 (431)
T PRK06209 198 ADEPQDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGIVPDLSC--FGKALGNGFAVSALAGKR------EY 268 (431)
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCCCcceee--ehhhhcCCcccEEEEEHH------HH
Confidence 12222445899999999999999999998 66532210 000011 357755 4699954 4578888887 56
Q ss_pred Hhh--hcc---c-cc-CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCcEEe-c-CCCC
Q 009673 337 ESA--INN---A-VF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLV-S-GGSD 403 (529)
Q Consensus 337 ~~~--i~~---~-~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~~v~-~-~gt~ 403 (529)
.+. +.. . .+ .+..-+++...+++..++|+.+.+++ ..+++.++.+++.+.|++ .++... . .|..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~ 345 (431)
T PRK06209 269 MELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRP 345 (431)
T ss_pred HhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecce
Confidence 554 211 1 11 11122234445555555787775543 456666667777777755 343321 1 1221
Q ss_pred CceEEEccCCCCCcH----HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 404 NHLVLVDLRPMGIDG----ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 404 ~~~~~v~~~~~~i~~----~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
..+.++...+.+... ..+.+.|.+.||.+ | + ++|+. .++++|++++.+.+.+++..
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~-----p----~-----l~is~------~ht~~dId~~l~~l~~~l~~ 405 (431)
T PRK06209 346 CCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLM-----P----S-----LVVSY------AHGDADIERTIDAVHGALGV 405 (431)
T ss_pred EEEEEecCCcccCCcHHHHHHHHHHHHHCCccc-----c----c-----ccccc------cCCHHHHHHHHHHHHHHHHH
Confidence 112222111111111 23556677789975 1 1 34441 36799999999999999876
Q ss_pred H
Q 009673 480 T 480 (529)
Q Consensus 480 ~ 480 (529)
.
T Consensus 406 ~ 406 (431)
T PRK06209 406 Y 406 (431)
T ss_pred H
Confidence 5
No 356
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.13 E-value=8.9e-08 Score=101.79 Aligned_cols=307 Identities=14% Similarity=0.101 Sum_probs=161.7
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCC-
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP- 191 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~p- 191 (529)
-.|.|.+|+...+......++ .++. .+ ...+++.+.+.- .+. ....+||++|+..++... .-.
T Consensus 70 ~~p~v~~ai~~q~~~~~~~~~-------~~~~--~~--~la~~l~~~~p~-~~~---v~f~~sGseA~e~AlklAr~~tg 134 (428)
T PRK12389 70 AHPHITKAITEAAENGVLYGT-------PTEL--EI--EFAKMLKEAIPS-LEK---VRFVNSGTEAVMTTIRVARAYTG 134 (428)
T ss_pred CCHHHHHHHHHHHHhCCccCC-------CCHH--HH--HHHHHHHHhCCC-CcE---EEEeCCHHHHHHHHHHHHHHhhC
Confidence 478888888877753211111 1221 22 233566666541 221 244689999999888643 223
Q ss_pred CCEEEEcCCCCCccccccccccccccccccce-----------E------EEEEcccCCCCCCCCHHHHHHHhhhc--CC
Q 009673 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----------F------ESMPYRLDESTGLVDYDMLEKTAILF--RP 252 (529)
Q Consensus 192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-----------~------~~v~~~v~~~~~~iD~d~le~~i~~~--~p 252 (529)
..+|+...-.|-|... + .+...+.. + ....++ ..|++.+++.+..+ ++
T Consensus 135 r~~ii~~~~~yHG~t~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~~v 201 (428)
T PRK12389 135 RTKIIKFAGCYHGHSD-L------VLVAAGSGPSTLGTPDSAGVPKSIAQEVITVP------FNDIEALKEALDKWGDEV 201 (428)
T ss_pred CCEEEEECCCcCCChH-H------HHHhcCCcccccCCCCCCCCCCcccCceEEcC------CCCHHHHHHHHHhcCCcE
Confidence 3577776654322210 0 01111100 0 011111 23789998888643 34
Q ss_pred cEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEecccccccccc-cccCCCCC-cccEEEecccccccC-CCCeE
Q 009673 253 KLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAA-SVVADPFK-YCDVVTTTTHKSLRG-PRGGM 323 (529)
Q Consensus 253 klIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~-~~~~~~~~-~aDiv~~S~hK~l~G-prgG~ 323 (529)
.+|++.. .+.+...+ +++|+++|++||+++|+|++|. |+-.. +....-+. ..|+++. .|.++| ...|.
T Consensus 202 aavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~Rt~~~~a~~~~gv~PDivt~--gK~lggG~Pi~a 278 (428)
T PRK12389 202 AAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVIT-AFRFMYGGAQDLLGVEPDLTAL--GKIIGGGLPIGA 278 (428)
T ss_pred EEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccc-ccccCcchhhHHhCCCCCeeee--chhhcCCCceeE
Confidence 5666652 22222444 8999999999999999999975 33110 10000011 3688754 599854 44566
Q ss_pred EEeeCCCcchhHHHhhhcc--cc-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCcE
Q 009673 324 IFFKKDPVLGVELESAINN--AV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYK 396 (529)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~--~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~~ 396 (529)
+++++ ++.+.+.. .. ..++.++... ..++..++|+.+.++ +..+++.++.++|.+.|++ .++.
T Consensus 279 v~~~~------~i~~~~~~~~~~~~~~T~~gnpl-~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~ 348 (428)
T PRK12389 279 YGGRK------DIMEQVAPLGPAYQAGTMAGNPA-SMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAEKHGIT 348 (428)
T ss_pred EeEHH------HHHhhhccCCCcccccCCccCHH-HHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 67777 67666642 11 1122333333 343333467766543 3456677777788877765 3432
Q ss_pred Ee-cCCCCCceEEEccCCCCC---------c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCH
Q 009673 397 LV-SGGSDNHLVLVDLRPMGI---------D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE 463 (529)
Q Consensus 397 v~-~~gt~~~~~~v~~~~~~i---------~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~ 463 (529)
.. ..+. . +.-+.+..... + ...+.+.|.++||.+... + ...+.+ .+ -+++
T Consensus 349 ~~v~r~~-g-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---~------~~~~~~---~l---~~t~ 411 (428)
T PRK12389 349 ITINRLK-G-ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPS---K------YEAWFL---TT---AHTE 411 (428)
T ss_pred EEEEecC-c-EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecC---C------CCCeee---cC---CCCH
Confidence 21 1111 1 22222211100 1 234667777899998532 1 111222 22 2679
Q ss_pred HHHHHHHHHHHHHHH
Q 009673 464 KEFVAIADFIHEGVE 478 (529)
Q Consensus 464 ~d~~~la~~i~~~~~ 478 (529)
+|++++.+.+.+++.
T Consensus 412 e~id~~~~~l~~~l~ 426 (428)
T PRK12389 412 EDIEETLEAVDRAFA 426 (428)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998875
No 357
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.11 E-value=8e-08 Score=97.52 Aligned_cols=285 Identities=17% Similarity=0.104 Sum_probs=167.3
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh---cCCCCEEEEcCCCCCccccccccccccccccccceEEEEE
Q 009673 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (529)
Q Consensus 153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~al---l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~ 228 (529)
-+..+++++|++.. |-...-+. .+-.++.++. -++..+++++.-.|+-++.-- .....+.+++++.
T Consensus 125 fQtlv~dLTGm~VA----NASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl------~Tra~~~g~~i~~ 194 (450)
T COG0403 125 FQTLVADLTGLDVA----NASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVL------RTRAEGLGIEIEV 194 (450)
T ss_pred HHHHHHHHhCCCcc----cchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHH------HhhcccCceEEEE
Confidence 35778899999863 33334444 4444444554 234689998876665443211 1122344456666
Q ss_pred cccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cc
Q 009673 229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC 305 (529)
Q Consensus 229 ~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~a 305 (529)
++.+ |.+++++. .+..+..+++.+|+.-+ ..|+++|.++++++|+++++= +..+..+....|-+ ++
T Consensus 195 ~~~~------d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~----aDplaL~LL~pPGe~GA 263 (450)
T COG0403 195 VDAD------DLDDLESA-DDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVA----ADPLALGLLKPPGEFGA 263 (450)
T ss_pred eccc------hhhhhhhc-cccCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEE----echhHhhccCCccccCC
Confidence 5443 77888877 44367788888888655 557999999999999988763 22233333344555 89
Q ss_pred cEEEecccc-----cccCCCCeEEEeeCCC-----c-----------------chhHHHhhhcccccCCCCCCChHHHHH
Q 009673 306 DVVTTTTHK-----SLRGPRGGMIFFKKDP-----V-----------------LGVELESAINNAVFPGLQGGPHNHTIG 358 (529)
Q Consensus 306 Div~~S~hK-----~l~GprgG~i~~~~~~-----~-----------------~~~~l~~~i~~~~~p~~~g~p~~~~ia 358 (529)
||++++++- +|+||..|+..++++. + .+..-++.|++-.-....+ .+..+.
T Consensus 264 DIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNIC--TnQaLl 341 (450)
T COG0403 264 DIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNIC--TNQALL 341 (450)
T ss_pred ceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhh--HHHHHH
Confidence 999999996 3688999999998741 0 0011122232211111011 122333
Q ss_pred HHHHH--HHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcC
Q 009673 359 GLAVC--LKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNK 434 (529)
Q Consensus 359 ala~a--l~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~ 434 (529)
|++++ +-.....++++..+++.+.+.+++++|++ .|++++.+ .++-.+.++........+.+.....||-+..
T Consensus 342 A~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~---~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~ 418 (450)
T COG0403 342 ALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD---HFFDTFTVRVPEEVAEALLAAAIAGGINLRR 418 (450)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc---cceeeEEEecchhHHHHHHHHHHhcCCceee
Confidence 44333 23444567899999999999999999996 56888753 2332222321111123334444456766543
Q ss_pred CCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 435 NSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 435 ~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
- .+..+=|+....+ +++|++.+++.+...
T Consensus 419 ~---------~~~~~~ia~tEt~----t~~~i~~l~~~~~~~ 447 (450)
T COG0403 419 V---------DADTVLIALTETT----TKEDIDALVAAFGGV 447 (450)
T ss_pred e---------cCCceEEEeeccc----CHHHHHHHHHHHhhh
Confidence 1 2234445544443 479999999887653
No 358
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.08 E-value=2.3e-07 Score=99.27 Aligned_cols=331 Identities=15% Similarity=0.123 Sum_probs=168.0
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cC
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~ 190 (529)
.-.|.|.+|+...+.+. . +....++. ++ ...++ .+++.+++....+. ....+|||+|+..++... ..
T Consensus 69 h~~p~i~~Ai~~ql~~~-~--~~~~~~~~-~~---~~~~l-ae~L~~~~p~~~~~---v~f~~SGsEA~e~AlklAr~~t 137 (457)
T PRK05639 69 YSHPKLVKAVQEQVALI-Q--HSMIGYTH-SE---RAIRV-AEKLAEISPIENPK---VLFGLSGSDAVDMAIKVSKFST 137 (457)
T ss_pred CCCHHHHHHHHHHHHhc-c--ccccCccC-CH---HHHHH-HHHHHhhCCCCcCE---EEEeCchHHHHHHHHHHHHHhc
Confidence 35788998888777532 1 11101111 11 11222 36666776543221 244689999999887643 22
Q ss_pred CCCEEEEcCCCC-Cccccc----cc-cccccccccccceEEEEEcccCCC-CC----CCCHH--------HHHHHhh---
Q 009673 191 PHDRIMGLDLPH-GGHLSH----GF-MTPKRRVSGTSIYFESMPYRLDES-TG----LVDYD--------MLEKTAI--- 248 (529)
Q Consensus 191 pGD~Vl~~~~~~-~g~~s~----g~-~~~~~~i~~~g~~~~~v~~~v~~~-~~----~iD~d--------~le~~i~--- 248 (529)
...+|+...-.| |.+... +. ........-.-..+..++++.... .+ .-|.+ .+++.+.
T Consensus 138 gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~ 217 (457)
T PRK05639 138 RRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHV 217 (457)
T ss_pred CCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 335677766543 322100 00 000000000000112233321000 00 01222 3444432
Q ss_pred --hcCCcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEEEeccccccc
Q 009673 249 --LFRPKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR 317 (529)
Q Consensus 249 --~~~pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv~~S~hK~l~ 317 (529)
..+..+||+..- ..++ ..-+++++++|++||+++|+|++|. |+--.|.. ..-+. ..|+++ +.|.++
T Consensus 218 ~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv~PDiv~--~gK~l~ 294 (457)
T PRK05639 218 VPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQT-GIGRTGKWFASEWFEVKPDLII--FGKGVA 294 (457)
T ss_pred cCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcCchHHHHHhcCCCCCEEE--echhhc
Confidence 124566776521 1111 2238899999999999999999986 54222210 01111 368888 469996
Q ss_pred -CCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cC
Q 009673 318 -GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LG 394 (529)
Q Consensus 318 -GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G 394 (529)
|...|.+++++ ++.+..... ..++.+++... .++..++|+.+.+. +..++..+..++|.+.|++ .+
T Consensus 295 gG~pi~av~~~~------~i~~~~~~~-~~~T~~g~p~~-~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~ 363 (457)
T PRK05639 295 SGMGLSGVIGRK------ELMDLTSGS-ALLTPAANPVI-SAAAEATLEIIEEE---NLLKNALKVGEFIKKRLLEMKES 363 (457)
T ss_pred CCCcceeEEehH------HHHhhcCCC-cccCCCcCHHH-HHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHHh
Confidence 44448888887 565522211 11233343333 33333457766543 3456666677788888766 23
Q ss_pred cEEecC--CCCCceEEEccCC-CCC-c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673 395 YKLVSG--GSDNHLVLVDLRP-MGI-D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 467 (529)
Q Consensus 395 ~~v~~~--gt~~~~~~v~~~~-~~i-~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~ 467 (529)
+.++.. |. .-+.-+.+.. ... + ...+.+.|.+.||.+... ......||+..|. + ++++|++
T Consensus 364 ~~~~~~VrG~-Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~-------g~~~~~lr~~Ppl-~---it~~~id 431 (457)
T PRK05639 364 FEVIGDVRGK-GLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSY-------GMFGNVIRITPPL-V---ITKEIAE 431 (457)
T ss_pred CCCEEeeccc-eeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeec-------CCCCCEEEEeCCC-c---cCHHHHH
Confidence 333321 11 1222222211 110 1 234666777899998432 1124689997553 3 6799999
Q ss_pred HHHHHHHHHHHHH
Q 009673 468 AIADFIHEGVEIT 480 (529)
Q Consensus 468 ~la~~i~~~~~~~ 480 (529)
++.+.+++++...
T Consensus 432 ~~~~~l~~~l~~~ 444 (457)
T PRK05639 432 KGLEIMERAIKDA 444 (457)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998754
No 359
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.07 E-value=2.3e-07 Score=99.13 Aligned_cols=321 Identities=11% Similarity=0.074 Sum_probs=169.2
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
.-.|.|.+|+...+.. +...... . + .++ ..+ ...+++.++++...+ .....+|||+|+..++....
T Consensus 70 h~~p~v~~Ai~~ql~~-~~~~~~~-~-~-~~~--~~~--~lAe~L~~~~p~~~~---~v~f~~sGseAve~AlKlA~~~~ 138 (453)
T PRK06943 70 HANPRINAALKDQLDT-LEHAMLA-G-C-THE--PAI--ELAERLAALTGGTLG---HAFFASDGASAVEIALKMSFHAW 138 (453)
T ss_pred CCCHHHHHHHHHHHHh-cCCcccc-c-c-CCH--HHH--HHHHHHHHhCCCCCC---EEEEeCCCHHHHHHHHHHHHHHH
Confidence 4578899998877643 2111110 0 1 111 122 233667777654322 12446899999998876541
Q ss_pred ----CCC-CEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCCCC--C-------CCCHHHH
Q 009673 190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDEST--G-------LVDYDML 243 (529)
Q Consensus 190 ----~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~------------~~~~v~~~v~~~~--~-------~iD~d~l 243 (529)
.+| .+|+...-.|-|... + .++..+. .+..++++..... . .-|++++
T Consensus 139 ~~rg~~~r~~Ii~~~~~yHG~t~-g------als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 211 (453)
T PRK06943 139 RNRGRGDKREFVCLANGYHGETI-G------ALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADV 211 (453)
T ss_pred HHhCCCCCCEEEEECCCcCCCcH-H------hhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHH
Confidence 223 578877755422210 0 0111110 0112222211000 0 1135677
Q ss_pred HHHhhhc--CCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccc-cC-CCCC-cccEEEec
Q 009673 244 EKTAILF--RPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDVVTTT 311 (529)
Q Consensus 244 e~~i~~~--~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~-~~~~-~aDiv~~S 311 (529)
++.+..+ +..+||+.. ...++ ..-+++++++|++||+++|.|+.+. |+--.|. .. .-+. ..|+++.+
T Consensus 212 ~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~T-G~GRtG~~fa~~~~gv~PDivt~g 290 (453)
T PRK06943 212 RRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAV-GCGRTGTFFACEQAGVWPDFLCLS 290 (453)
T ss_pred HHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhh-CCCCCcchhHHHhCCCCCCeEeee
Confidence 7777532 455677654 12222 2238899999999999999999853 3311121 00 0111 36899875
Q ss_pred ccccccCC--CCeEEEeeCCCcchhHHHhhhccc-----c-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673 312 THKSLRGP--RGGMIFFKKDPVLGVELESAINNA-----V-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (529)
Q Consensus 312 ~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~-----~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a 383 (529)
|.++|. ..|.+++++ ++.+.+... . ..++.++ +....++..+.|+.+.+++ ..+++.+..
T Consensus 291 --Kgl~gG~~Pi~av~~~~------ei~~~~~~~~~~~~~~~~~T~~g-npl~~aaa~a~L~~i~~~~---l~~~~~~~G 358 (453)
T PRK06943 291 --KGISGGYLPLSLVLSRD------AIFAAFYDDDVTRGFLHSHSYTG-NPLACRAALATLDLFAEDD---VLARNARKS 358 (453)
T ss_pred --hhhccCcccceEEEEcH------HHHHhhcccCccCCccCCCCCCC-CHHHHHHHHHHHHHHHhcC---HHHHHHHHH
Confidence 998543 567777877 566555321 1 1222333 3333444334577665433 345566667
Q ss_pred HHHHHHHHhc-CcEEecC--CCCCceEEEccCCC-CCc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCC
Q 009673 384 RALASRLVEL-GYKLVSG--GSDNHLVLVDLRPM-GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM 456 (529)
Q Consensus 384 ~~l~~~L~~~-G~~v~~~--gt~~~~~~v~~~~~-~i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~ 456 (529)
++|.+.|++. ....+.. |. ..+.-+.+... ..+ ...+.+.+.+.||.+... ...+|+.-| +
T Consensus 359 ~~l~~~L~~l~~~~~v~~vrG~-Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~----------g~~l~~~Pp-l 426 (453)
T PRK06943 359 ARLRAALAPLAAHPQVRHLRQR-GTIFAFDVALDGDAARTFSRRFFEAALERELLLRPI----------GTTVYLMPP-Y 426 (453)
T ss_pred HHHHHHHHHHhcCCCEEeEecc-ccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEec----------CCEEEEeCC-C
Confidence 7777777662 1221211 11 12333344311 111 234667777899998421 135899744 4
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHH
Q 009673 457 TTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 457 tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
+ ++++|++++++.+.+++..
T Consensus 427 ~---it~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 427 V---LDDDEIAWLAERTRATLDA 446 (453)
T ss_pred c---CCHHHHHHHHHHHHHHHHH
Confidence 4 6799999999999999874
No 360
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.06 E-value=9.6e-08 Score=96.09 Aligned_cols=342 Identities=18% Similarity=0.139 Sum_probs=162.4
Q ss_pred cceeEecCCCCCcHHHHHHHhhhhh---cc-CCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673 103 KSLELIASENFTSRAVMEAVGSCLT---NK-YSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~asen~~~~~V~eal~~~l~---~~-y~~G~p~~r~~-~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG 177 (529)
..++|.-+-.-++++-++--...|. .. +.......|.| |+..-+.+++ +.+++++|++.++ |.+...
T Consensus 23 ~~L~LdmtRGKPs~eQLdLS~~lL~~~~~~~~~~dG~D~RNY~G~l~Gipe~r----~l~a~llgv~~~~----viv~gN 94 (425)
T PF12897_consen 23 KGLKLDMTRGKPSPEQLDLSNPLLDLPGSSDYLADGTDCRNYPGGLDGIPEAR----ELFAELLGVPPEN----VIVGGN 94 (425)
T ss_dssp TT--EES---S--HHHHHGGGGGGGSSTTCCBECTTEBTTSS-S-SS--HHHH----HHHHHHHTS-GGG----EEE-SS
T ss_pred cCCCcccCCCCCCHHHHhhhHHHhcCCCCccccCCCccccCCCCccCChHHHH----HHHHHHhCCCHHH----EEEecc
Confidence 5677766666666666554333332 11 11112245788 7777666554 7789999999874 333333
Q ss_pred H--HHHHHHH-Hhh----cC--------CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHH
Q 009673 178 S--PANFEVY-TAI----LK--------PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM 242 (529)
Q Consensus 178 s--~A~~~~l-~al----l~--------pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~ 242 (529)
| .-++-++ .++ .. +.=+.|++.|.|--|++ -....| ++.+++|.++ ..+|.|.
T Consensus 95 SSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFa--------i~E~~G--iemi~VpM~~--dGPDmD~ 162 (425)
T PF12897_consen 95 SSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFA--------ITEHFG--IEMIPVPMTE--DGPDMDM 162 (425)
T ss_dssp -HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHH--------HHHHCT---EEEEEEEET--TEE-HHH
T ss_pred chHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHH--------HHHhhC--cEEEecCCCC--CCCCHHH
Confidence 3 3222222 222 11 12267888887766653 223445 4777777763 3699999
Q ss_pred HHHHhhh-cCCcEEEEc-CCCCCC--CCCHHHHHHHH----HHhCCEEEEeccccccccccccc-CC---CCC------c
Q 009673 243 LEKTAIL-FRPKLIIAG-ASAYPR--DFDYPRMRQIA----DAVGALLMMDMAHISGLVAASVV-AD---PFK------Y 304 (529)
Q Consensus 243 le~~i~~-~~pklIi~~-~s~~p~--~~d~~~i~~ia----~~~g~~livD~ah~~Gli~~~~~-~~---~~~------~ 304 (529)
+|+++.+ ...|.|++. .-+||+ ...-+.++.+| ...+..++.|.|++......+.. .. .++ +
T Consensus 163 Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGn 242 (425)
T PF12897_consen 163 VEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGN 242 (425)
T ss_dssp HHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-
T ss_pred HHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcCC
Confidence 9999854 245888876 224554 33434444454 34689999999977766533221 11 111 2
Q ss_pred cc--EEEecccc-cccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHH--
Q 009673 305 CD--VVTTTTHK-SLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV-- 379 (529)
Q Consensus 305 aD--iv~~S~hK-~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i-- 379 (529)
.| ++..||+| +|+|...+++..++ +..+.+.+.......|.--++++.-.. =|+... .+.++.+++.
T Consensus 243 pdrv~~F~STSKITf~GaGva~~aaS~------~Nl~~~~~~~~~~tIgpdKvNQLRHvr-ff~d~~-gGv~aHM~kHa~ 314 (425)
T PF12897_consen 243 PDRVYVFASTSKITFPGAGVAFFAASE------ANLAWIKKHLSVQTIGPDKVNQLRHVR-FFKDAE-GGVRAHMRKHAA 314 (425)
T ss_dssp TTSEEEEEESTTTS-TTSS-EEEEE-H------HHHHHHHHHHHHH-S---HHHHHHHHH-HHHSHH-THHHHHHHHHHH
T ss_pred CCeEEEEecccccccCCcceeeeecCH------HHHHHHHHHhcCceeCccHHHHHHHHH-HhcChh-hHHHHHHHHHHH
Confidence 34 77889999 57887778988887 333333222111112222233332110 111110 0222222221
Q ss_pred ------HHHHHHHHHHHH-hcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCC--CCCCCCCCCCCCeEE
Q 009673 380 ------VSNCRALASRLV-ELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKN--SVPGDKSALVPGGIR 450 (529)
Q Consensus 380 ------~~~a~~l~~~L~-~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~--~~Pg~~~~~~~~~iR 450 (529)
....+.|.++|. ..|+--++.....+++.+|+.+ | ....+.+++.++||.+... +.|....| ..+.||
T Consensus 315 il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~-G-~AkrvV~lakeAGV~LT~AGAtfPyg~DP-~D~nIR 391 (425)
T PF12897_consen 315 ILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD-G-TAKRVVELAKEAGVALTPAGATFPYGKDP-RDSNIR 391 (425)
T ss_dssp HHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST-T--HHHHHHHHHHTTEE---TTTTSGGG--T-TS-EEE
T ss_pred HHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC-C-hHHHHHHHHHHhCceeCCCCCCCCCCCCC-CCCcEE
Confidence 112223444454 3455555433345677777753 3 5678999999999998652 24432222 247899
Q ss_pred EccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 451 IGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 451 ig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
|.-. + -+.+|++...+.+.-+++.+
T Consensus 392 iAPS-~----P~leel~~Am~~~~~cv~la 416 (425)
T PF12897_consen 392 IAPS-Y----PSLEELETAMDVFATCVKLA 416 (425)
T ss_dssp E--S-S----S-HHHHHHHHHHHHHHHHHH
T ss_pred ecCC-C----CCHHHHHHHHHHHHHHHHHH
Confidence 9632 2 23699999999988887765
No 361
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.05 E-value=1.3e-07 Score=101.43 Aligned_cols=216 Identities=16% Similarity=0.200 Sum_probs=119.4
Q ss_pred CHHHHHHHhhhc-----CCcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccc-cC-CCCC-c
Q 009673 239 DYDMLEKTAILF-----RPKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-Y 304 (529)
Q Consensus 239 D~d~le~~i~~~-----~pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~-~~~~-~ 304 (529)
+.+.+++.+.+. ++.+||+..- ..++ ..-+++++++|++||+++|.|+.+. |+--.|. .. .-+. .
T Consensus 214 ~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~t-GfGRtG~~~a~e~~gv~ 292 (464)
T PRK06938 214 NLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQS-GFGRTGKMFAFEHAGII 292 (464)
T ss_pred HHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcHHHHHHhcCCC
Confidence 367778877642 3456666521 1212 2238899999999999999999853 4311111 00 0011 3
Q ss_pred ccEEEecccccccC-CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673 305 CDVVTTTTHKSLRG-PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (529)
Q Consensus 305 aDiv~~S~hK~l~G-prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a 383 (529)
.|+++.+ |.++| ...|.+++++ ++ +.+......++.++......+++ +.|+.+.+. +..+++.+..
T Consensus 293 PDiv~~g--KglggG~PlsAv~~~~------~~-~~~~~~~~~~T~~gnpla~Aaa~-a~L~~l~~~---~l~~~~~~~G 359 (464)
T PRK06938 293 PDVVVLS--KAIGGSLPLAVVVYRE------WL-DTWQPGAHAGTFRGNQMAMAAGS-ATLRYIKEH---RLAEHAAAMG 359 (464)
T ss_pred CCEEEee--ccccCCCceEEEeehh------Hh-hccCCCCCCCCCCcCHHHHHHHH-HHHHHHHHh---HHHHHHHHHH
Confidence 6898875 99854 4457777776 44 33332222233344333333333 356665443 3455666666
Q ss_pred HHHHHHHHhc--CcEEecC--CCCCceEEEccCCC-C---------Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCC
Q 009673 384 RALASRLVEL--GYKLVSG--GSDNHLVLVDLRPM-G---------ID---GARVEKILDMASITLNKNSVPGDKSALVP 446 (529)
Q Consensus 384 ~~l~~~L~~~--G~~v~~~--gt~~~~~~v~~~~~-~---------i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~ 446 (529)
++|.+.|++. .+.++.. |. .-+.-+.+... + .+ ...+...|.++||.+... | . ..
T Consensus 360 ~~l~~~L~~l~~~~~~i~~VrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~---g---~-~~ 431 (464)
T PRK06938 360 ERLREHLRQLQRDYPQLGDVRGR-GLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELG---G---R-HG 431 (464)
T ss_pred HHHHHHHHHHHHhCCCeeeeecc-ceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeec---C---C-CC
Confidence 6777777552 2222221 11 12223333211 0 01 234566677899998431 1 0 13
Q ss_pred CeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 447 GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 447 ~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
..||+.-| ++ ++++|++++.+++.+++...
T Consensus 432 ~~l~~~Pp-l~---it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 432 SVVRFLPP-LI---ITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred CEEEEECC-Cc---cCHHHHHHHHHHHHHHHHHH
Confidence 56898644 44 67999999999999998753
No 362
>PRK07481 hypothetical protein; Provisional
Probab=99.05 E-value=2.2e-07 Score=99.37 Aligned_cols=201 Identities=16% Similarity=0.201 Sum_probs=113.1
Q ss_pred CCcEEEEcCC-CCCC-CC----CHHHHHHHHHHhCCEEEEecccccccccccc-c-CCCCC-cccEEEecccccccCC--
Q 009673 251 RPKLIIAGAS-AYPR-DF----DYPRMRQIADAVGALLMMDMAHISGLVAASV-V-ADPFK-YCDVVTTTTHKSLRGP-- 319 (529)
Q Consensus 251 ~pklIi~~~s-~~p~-~~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~-~~~~~-~aDiv~~S~hK~l~Gp-- 319 (529)
++.+||+..- ..++ .. -+++++++|++||+++|.|+.+. |+--.+. . ..-+. ..|+++.+ |.++|.
T Consensus 213 ~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~ 289 (449)
T PRK07481 213 TIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVT-GFGRTGSWFGSRGWGVKPDIMCLA--KGITSGYV 289 (449)
T ss_pred cEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhh-CcCcCchhhHhhhcCCCCCEEEEe--ecccCCCc
Confidence 4556777522 1222 22 28899999999999999999864 4311110 0 00011 36888875 998652
Q ss_pred CCeEEEeeCCCcchhHHHhhhccc-------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673 320 RGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (529)
Q Consensus 320 rgG~i~~~~~~~~~~~l~~~i~~~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~ 392 (529)
..|.+++++ ++.+.+... ...++.++... ..++..+.|+.+.+. +..+++.+..++|.+.|++
T Consensus 290 Pi~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~gnpl-~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~ 359 (449)
T PRK07481 290 PLGATMVNA------RIADAFEANADFGGAIMHGYTYSGHPV-ACAAALATLDIVVRE---DLPANAAKRGAYLLEGLQP 359 (449)
T ss_pred CceEEEEcH------HHHHHHhccCccccccccCCCCCCCHH-HHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHH
Confidence 567777777 566655421 11123333233 333333457665443 3455666667777777765
Q ss_pred c--CcEEecC--CCCCceEEEccCCC-----CCc-----HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCcc
Q 009673 393 L--GYKLVSG--GSDNHLVLVDLRPM-----GID-----GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTT 458 (529)
Q Consensus 393 ~--G~~v~~~--gt~~~~~~v~~~~~-----~i~-----~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt 458 (529)
. .+.++.. |. .-+.-+.+... ..+ ...+.+.|.+.||.+... ...+||..| ++
T Consensus 360 l~~~~~~i~~vrG~-Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----------g~~i~l~Pp-l~- 426 (449)
T PRK07481 360 LKERFELVGDVRGK-GLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPS----------GTKIILSPP-LV- 426 (449)
T ss_pred HhhcCCCeEEEeec-ceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEec----------CCEEEEECC-CC-
Confidence 2 2332221 11 12333333211 001 234666777899998431 135888644 43
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 009673 459 RGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 459 ~g~~~~d~~~la~~i~~~~~~ 479 (529)
++++|++++.+.+.+++..
T Consensus 427 --it~~eid~~~~~l~~~l~~ 445 (449)
T PRK07481 427 --IQREDVDRIVDALDAGLSA 445 (449)
T ss_pred --CCHHHHHHHHHHHHHHHHh
Confidence 5699999999999998864
No 363
>PRK07482 hypothetical protein; Provisional
Probab=99.04 E-value=1.8e-07 Score=100.26 Aligned_cols=215 Identities=15% Similarity=0.145 Sum_probs=119.7
Q ss_pred CHHHHHHHhhh---cCCcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEeccccccc--ccccccCCCCC-ccc
Q 009673 239 DYDMLEKTAIL---FRPKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGL--VAASVVADPFK-YCD 306 (529)
Q Consensus 239 D~d~le~~i~~---~~pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gl--i~~~~~~~~~~-~aD 306 (529)
+++.+++.+.. .+..+||+..- ..++ ..-+++|+++|++||+++|+|+.+. |+ ........-+. ..|
T Consensus 205 ~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~t-GfGRtG~~~a~~~~gv~PD 283 (461)
T PRK07482 205 CADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVT-GFGRLGSMFGSDHYGIEPD 283 (461)
T ss_pred HHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcCcchhhHHhcCCCCC
Confidence 45778887742 23556776521 1212 2238899999999999999999853 43 21110000011 368
Q ss_pred EEEecccccccCC--CCeEEEeeCCCcchhHHHhhhccc-------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHH
Q 009673 307 VVTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (529)
Q Consensus 307 iv~~S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~ 377 (529)
+++.+ |.++|. ..|.+++++ ++.+.+... ...++.++ +....++..++|+.+.+++ ..+
T Consensus 284 iv~~g--Kgl~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~g-npl~~Aaa~a~L~~~~~~~---l~~ 351 (461)
T PRK07482 284 LITVA--KGLTSAYAPLSGSIVGE------KVWDVLEQGSDEHGAIGHGWTYSG-HPICAAAALANLDILEREN---LVG 351 (461)
T ss_pred EEEEc--cccccCccccceeeecH------HHHHHHhcccccCCccccCCCCCc-CHHHHHHHHHHHHHHHhCC---HHH
Confidence 99865 999552 456666666 555544311 11122333 3333444344677665443 345
Q ss_pred HHHHHHHHHHHHHHhc--CcEEecC--CCCCceEEEccCCCC-----Cc-----HHHHHHhHhcCCeEEcCCCCCCCCCC
Q 009673 378 KVVSNCRALASRLVEL--GYKLVSG--GSDNHLVLVDLRPMG-----ID-----GARVEKILDMASITLNKNSVPGDKSA 443 (529)
Q Consensus 378 ~i~~~a~~l~~~L~~~--G~~v~~~--gt~~~~~~v~~~~~~-----i~-----~~~~~~~L~~~GI~v~~~~~Pg~~~~ 443 (529)
++.+..++|.+.|++. ...++.. |. ..+.-+.+.... .+ ...+...|.+.||.+.. .|
T Consensus 352 ~~~~~g~~l~~~L~~l~~~~~~v~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~--~~----- 423 (461)
T PRK07482 352 NAAEVGAYFRARLRAAFGDHPLVGEVRGV-GMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARA--MP----- 423 (461)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEeec-eeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEec--CC-----
Confidence 5666677777777641 2222211 11 122233332110 01 23466777789999842 11
Q ss_pred CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 444 LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 444 ~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
....+|+..| ++ ++++|++++++.+.+++..
T Consensus 424 -~~~~i~~~Pp-l~---it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 424 -HGDILGFAPP-LV---LTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred -CCCEEEEeCC-CC---CCHHHHHHHHHHHHHHHHH
Confidence 1356888644 44 6799999999999999874
No 364
>PRK07480 putative aminotransferase; Validated
Probab=99.02 E-value=5.4e-07 Score=96.46 Aligned_cols=213 Identities=15% Similarity=0.120 Sum_probs=115.8
Q ss_pred HHHHHHhhh---cCCcEEEEcCC-CC-CCCC----CHHHHHHHHHHhCCEEEEecccc-cccccccccCCCCC-cccEEE
Q 009673 241 DMLEKTAIL---FRPKLIIAGAS-AY-PRDF----DYPRMRQIADAVGALLMMDMAHI-SGLVAASVVADPFK-YCDVVT 309 (529)
Q Consensus 241 d~le~~i~~---~~pklIi~~~s-~~-p~~~----d~~~i~~ia~~~g~~livD~ah~-~Gli~~~~~~~~~~-~aDiv~ 309 (529)
+.+++.+.. .+..+||+..- .. +... -+++++++|++||+++|+|+++. +|-........-+. ..|+++
T Consensus 206 ~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~ 285 (456)
T PRK07480 206 RQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMT 285 (456)
T ss_pred HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeee
Confidence 566655532 13456776521 22 2222 28999999999999999999963 32221100000011 368877
Q ss_pred ecccccccCC--CCeEEEeeCCCcchhHHHhhhc--cc--ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHH-HHH
Q 009673 310 TTTHKSLRGP--RGGMIFFKKDPVLGVELESAIN--NA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV-VSN 382 (529)
Q Consensus 310 ~S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~--~~--~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i-~~~ 382 (529)
++ |.++|. ..|.+++++ ++.+.+. .. ...++.++. ....++..++|+.+.+++ ..+++ .+.
T Consensus 286 ~g--K~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~T~~gn-pl~~Aaa~a~L~~l~~~~---l~~~~~~~~ 353 (456)
T PRK07480 286 IA--KGLTSGYIPMGAVGVGD------RVAEVLIEEGGEFNHGFTYSGH-PVAAAVALANLRILRDEG---IVERVRDDT 353 (456)
T ss_pred ee--hhhccCCccceEEEEcH------HHHHHHhcCCCCcccCCCCCcC-HHHHHHHHHHHHHHHhCC---HHHHHHHHH
Confidence 64 999652 456666776 5655552 11 122334443 334444444677665443 34455 355
Q ss_pred HHHHHHHHHhc-CcEEecC--CCCCceEEEccCCC-C----C-c----HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeE
Q 009673 383 CRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPM-G----I-D----GARVEKILDMASITLNKNSVPGDKSALVPGGI 449 (529)
Q Consensus 383 a~~l~~~L~~~-G~~v~~~--gt~~~~~~v~~~~~-~----i-~----~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~i 449 (529)
.++|.+.|++. ...++.. |. .-+.-+.+... . . + ...+...+.+.||.+... ...+
T Consensus 354 g~~l~~~l~~l~~~~~i~~vrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------~~~l 422 (456)
T PRK07480 354 GPYLQKRLRELADHPLVGEVRGV-GLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV----------GDRM 422 (456)
T ss_pred HHHHHHHHHHhhcCCCeeeEEee-cceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec----------CCEE
Confidence 66666666552 1222211 11 12222333111 0 0 1 134566677899998421 2468
Q ss_pred EEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 450 RIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 450 Rig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
|+. |.++ ++++|++++.+.+.+++...
T Consensus 423 ~~~-Ppl~---it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 423 IIS-PPLV---ITHAEIDELVEKARKALDAT 449 (456)
T ss_pred EEE-CCCC---CCHHHHHHHHHHHHHHHHHH
Confidence 997 4444 57999999999999998753
No 365
>PRK07483 hypothetical protein; Provisional
Probab=99.02 E-value=2.6e-07 Score=98.52 Aligned_cols=220 Identities=17% Similarity=0.183 Sum_probs=121.1
Q ss_pred HHHHHHhhh---cCCcEEEEcCCC--CCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccc-cC-CCCC-cccE
Q 009673 241 DMLEKTAIL---FRPKLIIAGASA--YPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDV 307 (529)
Q Consensus 241 d~le~~i~~---~~pklIi~~~s~--~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~-~~~~-~aDi 307 (529)
+++++.+.. .+..+||+..-. .++ ..-+++++++|++||+++|+|+.+. |+--.|. .. .-+. ..|+
T Consensus 186 ~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~~~~gv~PDi 264 (443)
T PRK07483 186 DELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMC-GMGRTGTLFACEEDGVAPDL 264 (443)
T ss_pred HHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEeccee-CcccCcHHHHHhhcCCCCCe
Confidence 566665542 134567765321 222 1238899999999999999999864 4311121 00 0011 3688
Q ss_pred EEecccccccCC--CCeEEEeeCCCcchhHHHhhhccc--c-c-CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 009673 308 VTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA--V-F-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381 (529)
Q Consensus 308 v~~S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~--~-~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~ 381 (529)
++.+ |.++|. +.|.+++++ ++.+.+... . . ..+.++... ..++..+.++.+.+++ ..+++.+
T Consensus 265 v~~g--K~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~h~~T~~gnpl-~~aaa~a~l~~i~~~~---l~~~~~~ 332 (443)
T PRK07483 265 VTIA--KGLGAGYQPIGAVLASD------RIYDAIADGSGFFQHGHTYLGHAT-ACAAALAVQRVIAEDG---LLANVRA 332 (443)
T ss_pred eeeh--hhhccCccccEEEEEcH------HHHHHHhcCCCccccCCCCCCCHH-HHHHHHHHHHHHHhcC---HHHHHHH
Confidence 8875 998543 567788877 566555422 1 1 123333233 3333334566665433 4566666
Q ss_pred HHHHHHHHHHh--cCcEEecC--CCCCceEEEccCCC-----CCc-----HHHHHHhHhcCCeEEcCCCCCCCCCCCCCC
Q 009673 382 NCRALASRLVE--LGYKLVSG--GSDNHLVLVDLRPM-----GID-----GARVEKILDMASITLNKNSVPGDKSALVPG 447 (529)
Q Consensus 382 ~a~~l~~~L~~--~G~~v~~~--gt~~~~~~v~~~~~-----~i~-----~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~ 447 (529)
..++|.+.|++ ..+.++.. |. .-+.-+.+... ..+ ...+.+.+.+.||.+.... +........
T Consensus 333 ~g~~l~~~L~~l~~~~~~i~~vRG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~--~~~~~~~~~ 409 (443)
T PRK07483 333 RGEQLRARLRERLGQHPHVGDIRGR-GLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMG--GTIDGVRGD 409 (443)
T ss_pred HHHHHHHHHHHHHhcCCCeeeEeec-ccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecC--ccccCCCCC
Confidence 67777777765 22332221 11 12222333110 001 2346677778999985320 000001135
Q ss_pred eEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 448 GIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 448 ~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
.|||.-| ++ ++++|+++++++|.+++...
T Consensus 410 ~l~~~Pp-L~---it~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 410 HVLLAPP-FI---ITAAQIDEIVERLGDAIDAA 438 (443)
T ss_pred EEEEECC-CC---CCHHHHHHHHHHHHHHHHHH
Confidence 7999644 54 67999999999999998753
No 366
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.02 E-value=4.9e-07 Score=97.02 Aligned_cols=213 Identities=15% Similarity=0.125 Sum_probs=114.9
Q ss_pred HHHHHHHhhh--cCCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccc-cC-CCCC-cccE
Q 009673 240 YDMLEKTAIL--FRPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDV 307 (529)
Q Consensus 240 ~d~le~~i~~--~~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~-~~~~-~aDi 307 (529)
++.+++.+.. .+..+||+.. ...++ ..-+++++++|++||+++|.|+.+. |+--.|. .. .-+. ..|+
T Consensus 223 ~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~T-GfGRtG~~~a~e~~gv~PDi 301 (472)
T PRK08742 223 ADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIAT-GFGRTGTLFACEQAGVMPDL 301 (472)
T ss_pred HHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccchHHHhcCCCCCE
Confidence 5667777753 2455667654 12222 2238899999999999999999864 3311121 00 0011 3689
Q ss_pred EEecccccccCC--CCeEEEeeCCCcchhHHHhhhccc-----cc-CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHH
Q 009673 308 VTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA-----VF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV 379 (529)
Q Consensus 308 v~~S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~-----~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i 379 (529)
++.+ |.|+|. ..|.+++++ ++.+.+... .. ..+.++ +....++..++|+.+.++++ .++.
T Consensus 302 v~~g--Kgl~gG~~Plaav~~~~------ei~~~~~~~~~~~~~~h~~T~~g-npl~~Aaa~a~L~~i~~~~l---~~~~ 369 (472)
T PRK08742 302 LCLS--KGLTGGFLPLSAVLATQ------QLYDAFLDDSRERAFLHSHSYTG-NPLACAAALATLDIFADDDV---IARN 369 (472)
T ss_pred EEEc--ccccCCCCCcceeeccH------HHHHHhhccCccCccCcCCCCCc-cHHHHHHHHHHHHHHHHCCH---HHHH
Confidence 9875 999543 457777776 565544321 11 122333 23334443345776654443 3333
Q ss_pred HHHHHHHHHHHHhc-CcEEecC--CCCCceEEEccCCCC-------Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCC
Q 009673 380 VSNCRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-------ID---GARVEKILDMASITLNKNSVPGDKSALVP 446 (529)
Q Consensus 380 ~~~a~~l~~~L~~~-G~~v~~~--gt~~~~~~v~~~~~~-------i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~ 446 (529)
.+..++|.+.++.. .+.++.+ |. ..+.-+.+.... .+ ...+.+.+.+.||.+... .
T Consensus 370 ~~~g~~l~~~~~~~~~~~~i~dvRG~-Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------g 438 (472)
T PRK08742 370 QPTAARMTQLAAQIGEHPHVADVRQA-GMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL----------G 438 (472)
T ss_pred HHHHHHHHHHHHHHhcCCCeeeEecc-ceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEec----------C
Confidence 33344444433321 1222221 11 122223332110 01 134556677899998431 2
Q ss_pred CeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 447 GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 447 ~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
+.|||. |.++ ++++|++++.+.|.+++...
T Consensus 439 ~vi~~~-PpL~---it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 439 DVLYWM-PPYC---VDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred CEEEEE-CCCC---CCHHHHHHHHHHHHHHHHHH
Confidence 579996 4454 67999999999999998754
No 367
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.02 E-value=2.5e-07 Score=99.12 Aligned_cols=321 Identities=17% Similarity=0.108 Sum_probs=168.7
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
.-.|+|.+|+...+.. ...+.. +...++. .+ ...+++.+++....+ .....+|||+|+..++....
T Consensus 72 h~~p~v~~Ai~~ql~~-l~~~~~---~~~~~~~--~~--~lae~L~~~~p~~~~---~v~f~~SGseAve~AlklAr~~~ 140 (460)
T PRK06916 72 HQVPELDEAIREQLNK-IAHSTL---LGLANVP--SI--LLAEKLIEVVPEGLK---KVFYSDSGATAVEIAIKMAFQYW 140 (460)
T ss_pred CCCHHHHHHHHHHHHh-CCCccc---cccCCHH--HH--HHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 4578899998877753 221111 1111221 22 233667777643222 23556899999998876432
Q ss_pred ----CCC-CEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccC---CCCC------CCCHHHH
Q 009673 190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLD---ESTG------LVDYDML 243 (529)
Q Consensus 190 ----~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~------------~~~~v~~~v~---~~~~------~iD~d~l 243 (529)
.+| .+|+...-.|-|... + .++..+. ....++++.. +... .-+++.+
T Consensus 141 ~~~g~tgr~~ii~~~~~YHG~t~-~------als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l 213 (460)
T PRK06916 141 QNKGKPKKQRFVTLKNAYHGDTI-G------AVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEEL 213 (460)
T ss_pred HhcCCCCCcEEEEECCcCCcccH-H------hHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHH
Confidence 243 578877755422210 0 1111110 0112222210 0000 1235667
Q ss_pred HHHhhhc--CCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEec
Q 009673 244 EKTAILF--RPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTT 311 (529)
Q Consensus 244 e~~i~~~--~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S 311 (529)
++.++.. +..+||+.. ...++ ..-+++++++|++||+++|+|+++ .|+--.|.. . .-+. ..|+++.
T Consensus 214 ~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~-TG~GRtG~~~a~~~~gv~PDiv~~- 291 (460)
T PRK06916 214 EELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVA-TGFGRTGKMFACEHENVTPDIMTA- 291 (460)
T ss_pred HHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechh-hCCCcCchhhHHHhcCCCCCeeee-
Confidence 7777532 455666654 12222 223789999999999999999996 443111210 0 0011 3688875
Q ss_pred ccccccCC--CCeEEEeeCCCcchhHHHhhhcc------ccc-CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673 312 THKSLRGP--RGGMIFFKKDPVLGVELESAINN------AVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (529)
Q Consensus 312 ~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~------~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~ 382 (529)
.|.++|. ..|.+++++ ++.+.+.. ..+ .++.++... .+++..+.|+.+.++ ++.+++.++
T Consensus 292 -gK~l~gG~~Pi~av~~~~------ei~~~~~~~~~~~~~~~~~~T~~gnpl-~~aaa~a~l~~l~~~---~l~~~~~~~ 360 (460)
T PRK06916 292 -GKGLTGGYLPIAITVTTD------EIYNAFYGDYEEQKTFFHGHSYTGNPL-GCAVALANLELYEKT---NLIEQVARK 360 (460)
T ss_pred -ehhhhcCccccceeeecH------HHHHHhhccccccCccccCCCCCCCHH-HHHHHHHHHHHHHhc---cHHHHHHHH
Confidence 5998543 467777777 56554421 111 223344333 333333456665443 345667777
Q ss_pred HHHHHHHHHhc-CcEEecC--CCCCceEEEccCCC-------CCc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeE
Q 009673 383 CRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPM-------GID---GARVEKILDMASITLNKNSVPGDKSALVPGGI 449 (529)
Q Consensus 383 a~~l~~~L~~~-G~~v~~~--gt~~~~~~v~~~~~-------~i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~i 449 (529)
.++|.+.|++. ...++.. |. .-+.-+.+... ..+ ...+...|.+.||.+... ...+
T Consensus 361 g~~l~~~l~~l~~~~~v~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------g~~l 429 (460)
T PRK06916 361 TEYVATQLEDLFALKHVGDIRQL-GLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPL----------GNTI 429 (460)
T ss_pred HHHHHHHHHHhhcCCCeEEeecC-CceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEec----------CCEE
Confidence 77788877762 1222211 11 12222222211 001 235667778899998421 2478
Q ss_pred EEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 450 RIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 450 Rig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
|+. |.++ ++++|++++.+.+.+++..
T Consensus 430 ~~~-Ppl~---it~~~id~~~~~l~~~l~~ 455 (460)
T PRK06916 430 VFM-PPLA---STIDELDEMLRILYKAISD 455 (460)
T ss_pred EEe-CCcc---cCHHHHHHHHHHHHHHHHh
Confidence 885 3444 6799999999999999864
No 368
>PRK06148 hypothetical protein; Provisional
Probab=99.00 E-value=3.8e-07 Score=106.36 Aligned_cols=322 Identities=17% Similarity=0.177 Sum_probs=168.5
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-c-CC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-L-KP 191 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l-~p 191 (529)
-.|+|.+|+...+... .. ..+|. ++ . +....+++.+.+.-..+ .....+|||+|+..++... . ..
T Consensus 639 ~hp~v~~Ai~~q~~~l-~~---~~~~~--~~---~-~~~lAe~L~~~~p~~~~---~v~f~nSGsEA~e~AlklAr~~tG 705 (1013)
T PRK06148 639 AHPRVVAAAARQAARL-NT---NTRYL--HD---A-IVAYAERLTATLPDGLT---VAFFVNSGSEANSLALRLARAHTG 705 (1013)
T ss_pred CCHHHHHHHHHHHhhc-CC---cCCcC--CH---H-HHHHHHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHhcC
Confidence 3789999988777532 11 11221 11 1 12233667776643222 2345689999999888643 2 22
Q ss_pred CCEEEEcCCCCCcccccccccccccccccc------------ceEEEEEcccC-CCCCC-CC-------HHHHHHHhhh-
Q 009673 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLD-ESTGL-VD-------YDMLEKTAIL- 249 (529)
Q Consensus 192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g------------~~~~~v~~~v~-~~~~~-iD-------~d~le~~i~~- 249 (529)
..+|+...-.|-|... + .+...+ ..+..++.+.. ...+. .| .+.+++.+..
T Consensus 706 r~~ii~~~~~YHG~t~-~------a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 778 (1013)
T PRK06148 706 QRDAIVLDHAYHGTTT-E------LIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAM 778 (1013)
T ss_pred CCeEEEEcCCccCCCc-c------hhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhh
Confidence 3568777654322210 1 011111 00111111100 00011 11 1345555531
Q ss_pred ----cCCcEEEEcC--CCCCCCC----CHHHHHHHHHHhCCEEEEecccc-cccccccccC-CCCC-cccEEEecccccc
Q 009673 250 ----FRPKLIIAGA--SAYPRDF----DYPRMRQIADAVGALLMMDMAHI-SGLVAASVVA-DPFK-YCDVVTTTTHKSL 316 (529)
Q Consensus 250 ----~~pklIi~~~--s~~p~~~----d~~~i~~ia~~~g~~livD~ah~-~Gli~~~~~~-~~~~-~aDiv~~S~hK~l 316 (529)
.++.+||+.. .+.+... -+++++++|++||+++|+|+.+. +|-....... .-.. ..|+++.+ |.+
T Consensus 779 ~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~g--K~l 856 (1013)
T PRK06148 779 AAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMG--KPI 856 (1013)
T ss_pred hccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeec--ccc
Confidence 2355677652 1222222 28899999999999999999963 3322211110 0011 36898765 998
Q ss_pred c-CCCCeEEEeeCCCcchhHHHhhhcccc-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-
Q 009673 317 R-GPRGGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL- 393 (529)
Q Consensus 317 ~-GprgG~i~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~- 393 (529)
+ |...|.+++++ ++.+.++... +.++.++......+++ +.|+.+.++ +..+++.+..++|.+.|++.
T Consensus 857 ggG~Plgav~~~~------ei~~~~~~g~~~~~Tf~gnpla~aaa~-a~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~ 926 (1013)
T PRK06148 857 GNGHPMGAVVTTR------EIADSFDNGMEYFNTFGGNPVSCAIGL-AVLDIIEDE---DLQRNALEIGNYLLAGLRELQ 926 (1013)
T ss_pred cCCcceEEEEEcH------HHHhhccCCCccccCCCCCHHHHHHHH-HHHHHHhhc---cHHHHHHHHHHHHHHHHHHHH
Confidence 4 44568888877 6766665432 2234455444444444 357766543 34566666677777777662
Q ss_pred -CcEEecC--CCCCceEEEccCCC----CCc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCH
Q 009673 394 -GYKLVSG--GSDNHLVLVDLRPM----GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE 463 (529)
Q Consensus 394 -G~~v~~~--gt~~~~~~v~~~~~----~i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~ 463 (529)
.+.++.. |. ..+.-+.+... .-+ ...+.+.|.+.||.+... | + ....|||..| ++ +++
T Consensus 927 ~~~~~i~~VrG~-Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---g---~-~~~vlr~~Pp-l~---it~ 994 (1013)
T PRK06148 927 DRFDIIGDVRGM-GLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTE---G---P-HDNVLKIRPP-LI---FSR 994 (1013)
T ss_pred HhCCCceEEeee-ceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEecc---C---C-CCCEEEEeCC-cc---CCH
Confidence 2222211 11 12222333211 011 234667777899998532 1 1 1367999744 44 679
Q ss_pred HHHHHHHHHHHHHHHH
Q 009673 464 KEFVAIADFIHEGVEI 479 (529)
Q Consensus 464 ~d~~~la~~i~~~~~~ 479 (529)
+|++++++.+.+++..
T Consensus 995 ~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 995 ADADHLLEVLDDVLAA 1010 (1013)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998864
No 369
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.99 E-value=1e-07 Score=97.30 Aligned_cols=316 Identities=15% Similarity=0.046 Sum_probs=178.3
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCC------ceeeecCChHHHHHHHHHhh-------cCCC-----------CEEEE
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKW------GVNVQPLSGSPANFEVYTAI-------LKPH-----------DRIMG 197 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~------~~~V~~~sGs~A~~~~l~al-------l~pG-----------D~Vl~ 197 (529)
.++...+||...-+|+.++++++.... +.-|.-.|.|++++.++.+- ++.+ +-|+.
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y 186 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY 186 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence 356788999999999999999874211 11233356677777766553 2222 22332
Q ss_pred cCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcC-----CcEEEEc-CCCCCC-CCCHHH
Q 009673 198 LDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAG-ASAYPR-DFDYPR 270 (529)
Q Consensus 198 ~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~-----pklIi~~-~s~~p~-~~d~~~ 270 (529)
.+- .+|-+- .++....+ ++...++.| +++.++.+.|+++|++.. |-+++.+ .+.++. ..++.+
T Consensus 187 ~SD--qahssv-----eka~~i~~--VklR~l~td-~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~e 256 (511)
T KOG0628|consen 187 CSD--QAHSSV-----EKACLIAG--VKLRALPTD-ENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEE 256 (511)
T ss_pred ecC--cccchH-----HHhHhhcc--eeEEEeecc-cCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHH
Confidence 221 122111 11222233 344445555 378999999999998753 4455554 233333 668999
Q ss_pred HHHHHHHhCCEEEEecccccccccc-ccc---CCCCCcccEEEecccccccC-CCCeEEEeeCCC--------cchhHHH
Q 009673 271 MRQIADAVGALLMMDMAHISGLVAA-SVV---ADPFKYCDVVTTTTHKSLRG-PRGGMIFFKKDP--------VLGVELE 337 (529)
Q Consensus 271 i~~ia~~~g~~livD~ah~~Gli~~-~~~---~~~~~~aDiv~~S~hK~l~G-prgG~i~~~~~~--------~~~~~l~ 337 (529)
|..+|+++|+||++|+| |+|-... ... -..++++|-+.+..|||+.- .-...++.+++. ...+--.
T Consensus 257 lg~Vc~~~glWLHVDAA-YAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h 335 (511)
T KOG0628|consen 257 LGPVCREEGLWLHVDAA-YAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKH 335 (511)
T ss_pred hcchhhhcCEEEEeehh-hccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcc
Confidence 99999999999999998 5553321 111 12345789999999999632 222344444431 0000000
Q ss_pred hhhcccccCCCCCCChHHHHHHH--HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEEEccCCC
Q 009673 338 SAINNAVFPGLQGGPHNHTIGGL--AVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRPM 414 (529)
Q Consensus 338 ~~i~~~~~p~~~g~p~~~~iaal--a~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~~~~ 414 (529)
+........-..+=|....+-++ +..++....+.+++|+++..+.++.+.+.+.+ .-|++..+ .++-++.++.+
T Consensus 336 ~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~---~~lgLvcFRlk 412 (511)
T KOG0628|consen 336 AYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNK---RILGLVCFRLK 412 (511)
T ss_pred hhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecc---cccceeEEeec
Confidence 11111110011222333344444 33455555556677777777777777666655 56887764 46666666655
Q ss_pred CCcH--HHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 415 GIDG--ARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 415 ~i~~--~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
+-+. +.+.+.+ ....|...+.++- +.-.||+.+.+- -.+++|+++.-+.|.+.....
T Consensus 413 ~~N~~ne~Ll~~in~~g~i~l~~~~l~------gk~vlRf~V~s~---~t~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628|consen 413 GDNEINEALLNRLNSSGRIHLVPASLH------GKFVLRFAVCSP---LTNESDIDEAWKIIFEAADEL 472 (511)
T ss_pred CCcHHHHHHHHHHHhcCcEEEEEeeec------ceEEEEEEecCC---CCcHHHHHHHHHHHHHHHHHH
Confidence 5332 3455555 4456776433211 123589865432 245899999998888877653
No 370
>PRK06917 hypothetical protein; Provisional
Probab=98.97 E-value=4.9e-07 Score=96.55 Aligned_cols=330 Identities=15% Similarity=0.106 Sum_probs=170.5
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
.-.|+|.+|+...+.. ....+.. . +. ++ .+....+++.+++.-..+ .....+|||+|+..++....
T Consensus 47 h~hp~v~~Ai~~ql~~-~~~~~~~-~-~~-~~----~~~~lae~L~~~~p~~~~---~v~f~~sGsEAve~AlklAr~~~ 115 (447)
T PRK06917 47 HGVKEIADAIKEQAEE-VSFVYRS-Q-FT-SE----PAEKLAKKLSDLSPGDLN---WSFFVNSGSEANETAMKIAIQHF 115 (447)
T ss_pred CCCHHHHHHHHHHHhh-CcCcccc-c-cC-CH----HHHHHHHHHHHhCCCCCC---EEEEeCChHHHHHHHHHHHHHHH
Confidence 4578899888877753 2211110 1 11 12 122233667777643322 13456899999998887541
Q ss_pred ----CCC-CEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCC-----CC-C---CCCHHHH
Q 009673 190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDE-----ST-G---LVDYDML 243 (529)
Q Consensus 190 ----~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~------------~~~~v~~~v~~-----~~-~---~iD~d~l 243 (529)
.+| .+|+...-.|-|... + .+...+. .+..++++... ++ . .-|.+.+
T Consensus 116 ~~rg~t~r~~ii~~~~~yHG~t~-~------als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 188 (447)
T PRK06917 116 QERGIQGKHKILSRWMSYHGITM-G------ALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATEL 188 (447)
T ss_pred HhcCCCCCCEEEEECCCcCCccH-H------HHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHH
Confidence 233 578877654322210 0 0111110 01111211100 00 0 0134667
Q ss_pred HHHhhhc---CCcEEEEcCC-C-CCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEe
Q 009673 244 EKTAILF---RPKLIIAGAS-A-YPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTT 310 (529)
Q Consensus 244 e~~i~~~---~pklIi~~~s-~-~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~ 310 (529)
++.++.+ +..+||+..- . .++ ..-+++++++|++||+++|+|+++. |+--.+.. . .-+. ..|+++.
T Consensus 189 e~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~t-GfGRtG~~~a~~~~gv~PDi~~~ 267 (447)
T PRK06917 189 ETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMT-GLGRTGAMFAMEHWGVEPDIMTL 267 (447)
T ss_pred HHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhh-CcCcccchhhHHhcCCCCCEEEe
Confidence 7777642 3556776632 1 121 2237899999999999999999974 53111210 0 0011 3688765
Q ss_pred cccccccCC--CCeEEEeeCCCcchhHHHhhhccc---ccC-CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673 311 TTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA---VFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (529)
Q Consensus 311 S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~---~~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~ 384 (529)
.|.++|. ..|.+++++ ++.+.+... .+. ++.++... .+++..+.++.+.++ +..+++.+..+
T Consensus 268 --gK~l~~G~~Pi~a~~~~~------~i~~~~~~~~~~~~~~~T~~gnpl-~~aaa~a~l~~l~~~---~l~~~~~~~g~ 335 (447)
T PRK06917 268 --GKGLGAGYTPIAATVVSD------RVMEPILRGSRSIMSGHTLSANPL-SAATALAVLEYMEKH---NLPEKAAEKGE 335 (447)
T ss_pred --eehhccCCcceEEEEEcH------HHHHHHhccCcccccccCCCCCHH-HHHHHHHHHHHHHHC---CHHHHHHHHHH
Confidence 5999653 567777877 566655321 111 23333333 344433457665443 34566666677
Q ss_pred HHHHHHHhc--CcEEecC--CCCCceEEEccCCC-----CC--c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEE
Q 009673 385 ALASRLVEL--GYKLVSG--GSDNHLVLVDLRPM-----GI--D---GARVEKILDMASITLNKNSVPGDKSALVPGGIR 450 (529)
Q Consensus 385 ~l~~~L~~~--G~~v~~~--gt~~~~~~v~~~~~-----~i--~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iR 450 (529)
+|.+.|++. .+.++.. |. ..+.-+.+... .. + ...+.+.|.+.||.+.... ..........+|
T Consensus 336 ~l~~~L~~l~~~~~~i~~vrG~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~--~~~~g~~~~~i~ 412 (447)
T PRK06917 336 YLIKGLQKVQQQSTIIGDVRGK-GLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAV--AGQDGKEGDAVI 412 (447)
T ss_pred HHHHHHHHHHhcCCCEEEEeec-ceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecc--cccCCCCCCEEE
Confidence 777777662 2222221 11 12222333110 00 1 2346667788999984320 000001135789
Q ss_pred EccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 451 IGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 451 ig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
+..| ++ ++++|++++++.+.+++...
T Consensus 413 l~Pp-l~---it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 413 IAPP-MT---ITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred EECC-Cc---CCHHHHHHHHHHHHHHHHHH
Confidence 9754 43 56999999999999999754
No 371
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.96 E-value=2.2e-06 Score=91.83 Aligned_cols=187 Identities=17% Similarity=0.242 Sum_probs=103.2
Q ss_pred HHHHHHHHHHhCCEEEEecccccccccccc-cC-CCCC-cccEEEeccccccc-CCCCeEEEeeCCCcchhHHHhhhccc
Q 009673 268 YPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELESAINNA 343 (529)
Q Consensus 268 ~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~-~~~~-~aDiv~~S~hK~l~-GprgG~i~~~~~~~~~~~l~~~i~~~ 343 (529)
+++++++|++||+++|.|+.+. |+--.|. .. .-+. ..|+++.+ |.++ |...|.+++++ ++ +.+...
T Consensus 248 l~~lr~lc~~~g~LlI~DEV~t-GfGRtG~~~a~~~~gv~PDivt~g--K~l~gG~Pi~av~~~~------~~-~~~~~~ 317 (459)
T PRK06931 248 LQKIREVTQKHGILLIVDEVQA-GFARTGKMFAFEHAGIEPDIIVMS--KAVGGGLPLAVLGIKK------EF-DAWQPG 317 (459)
T ss_pred HHHHHHHHHHcCCEEEEecchh-cCCcCchHHHhhhcCCCCCEEEec--ccccCCcceeeeeeHH------HH-hhccCC
Confidence 8899999999999999999864 3311111 00 0011 36898875 9984 43456666665 43 333322
Q ss_pred ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEecC--CCCCceEEEccCCC-C---
Q 009673 344 VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSG--GSDNHLVLVDLRPM-G--- 415 (529)
Q Consensus 344 ~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~~--gt~~~~~~v~~~~~-~--- 415 (529)
...++.++... ..++..+.|+.+.+.+ ..+++.+..++|.+.|++. .+.++.. |. .-+.-+.+... .
T Consensus 318 ~~~~T~~gnpl-a~aaala~L~~l~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~-Glm~giel~~~~~~~~ 392 (459)
T PRK06931 318 GHTGTFRGNQL-AMATGLTTLKILKEEN---LAQNAAERGEWLKAQLAELQKRYPCIGNVRGR-GLMIGIEIVDERQPAD 392 (459)
T ss_pred CCCCCCCCCHH-HHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHhCCCeEeEecC-ceEEEEEEccCccccc
Confidence 22233344333 3333334566665443 3455555566666666552 1222211 11 12222333211 0
Q ss_pred ------Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 416 ------ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 416 ------i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
.+ ...+.+.|.+.||.+... . .....+|+..| ++ ++++|++++.+++.+++...
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----~---~~~~~l~~~Pp-l~---it~~eid~~~~~l~~~l~~~ 455 (459)
T PRK06931 393 AMGSYPADGELAAAIQKACFENGLLLERG----G---RNGNVVRLLPP-LL---ITQAECEEFIDRFEQALLAA 455 (459)
T ss_pred ccccCCccHHHHHHHHHHHHHCCcEEeec----C---CCCCEEEEECC-CC---cCHHHHHHHHHHHHHHHHHH
Confidence 01 134556677899998431 1 11356998654 43 67999999999999998754
No 372
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.94 E-value=1.2e-06 Score=94.05 Aligned_cols=213 Identities=14% Similarity=0.128 Sum_probs=120.8
Q ss_pred HHHHHHHhhhc--CCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccc-cC-CCCC-cccE
Q 009673 240 YDMLEKTAILF--RPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDV 307 (529)
Q Consensus 240 ~d~le~~i~~~--~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~-~~~~-~aDi 307 (529)
++.+++.+..+ +..+||+.. ...++ ..-+++++++|++||+++|+|+.+. |+--.|. .. ..+. ..|+
T Consensus 201 l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~T-GfGRtG~~~a~~~~gv~PDi 279 (466)
T PRK07030 201 FAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAV-GFGRTGTMFACEQAGIRPDF 279 (466)
T ss_pred HHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CcCccccchHHHhcCCCCCE
Confidence 46677777532 345666654 12222 1238899999999999999999853 3311111 00 0111 3689
Q ss_pred EEecccccccCC--CCeEEEeeCCCcchhHHHhhhcc------c-ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHH
Q 009673 308 VTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINN------A-VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (529)
Q Consensus 308 v~~S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~------~-~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~ 378 (529)
++++ |.++|. ..|.+++++ ++.+.+.. . ...++.++... ..++..++|+.+.+++ ..++
T Consensus 280 v~~g--Kgl~gG~~Pi~av~~~~------ei~~~~~~~~~~~~~~~h~~T~~gnpl-a~aaa~a~L~~i~~~~---l~~~ 347 (466)
T PRK07030 280 LCLS--KALTGGYLPLAAVLTTD------TVYQAFYDDYPTLRAFLHSHSYTGNPL-ACAAALATLDIFEQDN---VIEN 347 (466)
T ss_pred Eeee--hhccCCcccceEEEecH------HHHHHHhcccccccccccCCCCCCCHH-HHHHHHHHHHHHHhcC---HHHH
Confidence 8875 998543 567788877 66655431 1 11223333233 3444344677665433 4556
Q ss_pred HHHHHHHHHHHHHhc-CcEEecC--CCCCceEEEccCCCC-------Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCC
Q 009673 379 VVSNCRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-------ID---GARVEKILDMASITLNKNSVPGDKSALV 445 (529)
Q Consensus 379 i~~~a~~l~~~L~~~-G~~v~~~--gt~~~~~~v~~~~~~-------i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~ 445 (529)
..+..++|.+.|++. .+..+.. |. ..+.-+.+.... .+ ...+.+.+.+.||.+...
T Consensus 348 ~~~~G~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---------- 416 (466)
T PRK07030 348 NRALARRMAEATAHLADHPHVAEVRQT-GMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPL---------- 416 (466)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEeEec-eeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEec----------
Confidence 666667777777652 1222211 11 122333332111 01 134666777899998421
Q ss_pred CCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 446 PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 446 ~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
...+|+.. .++ ++++|++++.+.+.+++...
T Consensus 417 g~~i~~~P-pl~---it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 417 GSVVYFLP-PYV---ITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred CCEEEEEC-Ccc---CCHHHHHHHHHHHHHHHHHH
Confidence 24688853 344 67999999999999999764
No 373
>PRK07036 hypothetical protein; Provisional
Probab=98.92 E-value=1.1e-06 Score=94.23 Aligned_cols=213 Identities=17% Similarity=0.153 Sum_probs=118.4
Q ss_pred HHHHHHhhh---cCCcEEEEcCC-C-CCCCCC----HHHHHHHHHHhCCEEEEecccc-cccccc-cccCCCCC-cccEE
Q 009673 241 DMLEKTAIL---FRPKLIIAGAS-A-YPRDFD----YPRMRQIADAVGALLMMDMAHI-SGLVAA-SVVADPFK-YCDVV 308 (529)
Q Consensus 241 d~le~~i~~---~~pklIi~~~s-~-~p~~~d----~~~i~~ia~~~g~~livD~ah~-~Gli~~-~~~~~~~~-~aDiv 308 (529)
+.+++.+.. .++.+||+..- . .+...+ +++++++|++||+++|+|+++. +|-... .....-+. ..|++
T Consensus 207 ~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDiv 286 (466)
T PRK07036 207 DEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDII 286 (466)
T ss_pred HHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEE
Confidence 345555542 23556776532 1 222233 8999999999999999999963 332210 00010111 36888
Q ss_pred EecccccccCC--CCeEEEeeCCCcchhHHHhhhccc------ccC-CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHH
Q 009673 309 TTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA------VFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV 379 (529)
Q Consensus 309 ~~S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~------~~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i 379 (529)
+.+ |.++|. ..|.+++++ ++.+.+... ... ++.++ +...+++..+.|+.+.++ +..+++
T Consensus 287 t~g--K~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~~~~T~~g-npl~~aaa~a~Le~i~~~---~l~~~~ 354 (466)
T PRK07036 287 TFA--KGLTSGYQPLGAVIISE------RLLDVISGPNAKGNVFTHGFTYSG-HPVACAAALKNIEIMERE---GLCEHV 354 (466)
T ss_pred EEc--cccccCccccEEEEEcH------HHHHHHhcccCcCcccccCCCCCC-CHHHHHHHHHHHHHHHhC---CHHHHH
Confidence 765 999653 467777777 566655321 111 13333 333344444467766543 345666
Q ss_pred HHHHHHHHHHHHhc-CcEEecC--CCCCceEEEccCCCC-------Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCC
Q 009673 380 VSNCRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-------ID---GARVEKILDMASITLNKNSVPGDKSALVP 446 (529)
Q Consensus 380 ~~~a~~l~~~L~~~-G~~v~~~--gt~~~~~~v~~~~~~-------i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~ 446 (529)
.+..++|.+.|++. .+.++.. |. .-+..+.+.... .+ ...+.+.|.+.||.+.. . .
T Consensus 355 ~~~g~~l~~~L~~l~~~~~v~~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~----~------~ 423 (466)
T PRK07036 355 REVGPYFEERLASLRELPLVGDVRGD-HLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRP----L------E 423 (466)
T ss_pred HHHHHHHHHHHHHhccCCCEEEEEee-ceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEee----c------C
Confidence 66777777777652 2222211 11 122333332110 11 23466677789999842 1 1
Q ss_pred CeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 447 GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 447 ~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
+.+|+..| ++ ++++|++++++.+.+++...
T Consensus 424 ~~~~l~Pp-l~---it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 424 HLCVLSPP-LI---ITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred CEEEEeCC-Cc---CCHHHHHHHHHHHHHHHHHH
Confidence 45788644 43 56899999999999998754
No 374
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.89 E-value=1.3e-06 Score=85.80 Aligned_cols=317 Identities=18% Similarity=0.200 Sum_probs=164.7
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-----
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----- 188 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al----- 188 (529)
-.|.+++|+.+... +.+ ..+..+|. ....+++ +.+.++||-+. .+-..+|.+|+..++.-.
T Consensus 76 chpki~~aLqeq~~-kLt--lssrafYn--d~~~~f~----~~vt~lf~~~k-----vlpmnTGaEa~Eta~KLaR~wgy 141 (427)
T KOG1402|consen 76 CHPKIIKALQEQAD-KLT--LSSRAFYN--DVLGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETACKLARKWGY 141 (427)
T ss_pred CCHHHHHHHHHHHh-Hhh--hhhHHHhh--hhHHHHH----HHHHHhcCcce-----eeecccchhHHHHHHHHHHHHHH
Confidence 47889999887765 321 11212332 2223444 78899999885 244577889988776432
Q ss_pred -cC--CCCEEEEcCCCCCccccccccccccccccccce-----EE-EEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 189 -LK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FE-SMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 189 -l~--pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-----~~-~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
.+ |.|+-++..-. +++ ||... ..+++++.. |. ++|..++ .--.-|.++|+.++++.+...+++..
T Consensus 142 ~~K~ip~nka~il~~~--~nF-hGrT~--~ais~s~d~ds~~~fgp~~P~~~~-~v~Y~d~eale~~l~~~~vaaFivEP 215 (427)
T KOG1402|consen 142 RKKNIPKNKAKILSAE--NNF-HGRTL--GAISLSTDPDSWDGFGPFLPGVVD-KVPYGDAEALEVALKSPNVAAFIVEP 215 (427)
T ss_pred hhccCCccceeEEEec--ccc-cCcee--eeEEecCCcchhhccCCCCCCcce-eeccCCHHHHHHHhcCCCeeEEEeec
Confidence 12 54544333221 111 22110 122222210 00 0010000 00123678888888774555555542
Q ss_pred C------CCCCCCCHHHHHHHHHHhCCEEEEeccccccccccccc-CCCCC--cccEEEecccccccCC--CCeEEEeeC
Q 009673 260 S------AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSLRGP--RGGMIFFKK 328 (529)
Q Consensus 260 s------~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~~~--~aDiv~~S~hK~l~Gp--rgG~i~~~~ 328 (529)
- .-|..--+++.+++|++||+++|.|+.|. |+--.|.. ...-+ ..|++... |.|.|. ....+++++
T Consensus 216 IQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQT-Gl~RTGk~la~d~env~PDivilg--KalSGG~~Pvsavl~~~ 292 (427)
T KOG1402|consen 216 IQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQT-GLARTGKLLACDYENVRPDIVILG--KALSGGVYPVSAVLADD 292 (427)
T ss_pred cccccceEeCCchhHHHHHHHHHhhcEEEEehhhhh-cccccCcEEEeehhhcCCCeEEEe--ccccCCeeeeEEEEecH
Confidence 1 11122348999999999999999999974 54322211 00001 35888865 888552 224455555
Q ss_pred CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEE---ec--CCCC
Q 009673 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL---VS--GGSD 403 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v---~~--~gt~ 403 (529)
++.-.++...-..+.|+.......|+ ++|+.+.+ +...++....-..|+.+|++..-++ +. .|.
T Consensus 293 ------~im~~~~pgeHgsTyggNpLg~~vai-Aalevi~e---ekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGr- 361 (427)
T KOG1402|consen 293 ------DIMLNIKPGEHGSTYGGNPLGCAVAI-AALEVIVE---EKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGR- 361 (427)
T ss_pred ------HHHhccCCCccccccCCChHHHHHHH-HHHHHHHH---HHHHHHHHHHHHHHHHHHHhccccccchhheeecc-
Confidence 56555655433333343222222222 35665543 2344454455556666776632111 11 111
Q ss_pred CceEEE--ccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 404 NHLVLV--DLRP-MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 404 ~~~~~v--~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
..+..+ +..+ .+.+.-.+.-.|.+.|+...+. ...-||+.-| ++ ++|+|+++-+++|.+.+
T Consensus 362 Gl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkpt---------H~~IiRfaPP-L~---I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 362 GLLNAIVINPSKTSGQDAWDVCLALKENGLLAKPT---------HGNIIRFAPP-LV---ISEEDLREGIEAIEKTI 425 (427)
T ss_pred ceEEEEEeccccccchhHHHHHHcccccccccCCC---------CCCeEEecCC-cc---cCHHHHHHHHHHHHHHh
Confidence 122222 3222 2234445667778888876332 2357999754 44 78999999999998765
No 375
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.89 E-value=7.7e-07 Score=94.94 Aligned_cols=209 Identities=14% Similarity=0.145 Sum_probs=113.8
Q ss_pred CHHHHHHHhhhc--CCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEeccccccccccccc----CCCCC-cc
Q 009673 239 DYDMLEKTAILF--RPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV----ADPFK-YC 305 (529)
Q Consensus 239 D~d~le~~i~~~--~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~----~~~~~-~a 305 (529)
+++.+++++..+ +..+||+.. .+.+...+ +++++++|++||+++|+|++| .|+-..|.. ...+. ..
T Consensus 237 ~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~-tGfGrtG~~fa~e~~gv~~~P 315 (464)
T TIGR00699 237 CLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQ-TGVGATGKFWAHEHWNLDDPP 315 (464)
T ss_pred HHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeee-eCCCCCcchhHHHhcCCCCCC
Confidence 456677777543 345666652 22222344 899999999999999999997 454222210 01111 26
Q ss_pred cEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 009673 306 DVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (529)
Q Consensus 306 Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~ 385 (529)
|++++ .|.+.| +|+++.++ .+.. ........+.++ +....++..++|+.+.+.+ ..+++.+..++
T Consensus 316 Di~t~--gK~lg~--gG~~~~~~------~~~~-~~~~~~~~T~~g-np~~~aaa~a~L~~l~~~~---l~~~~~~~g~~ 380 (464)
T TIGR00699 316 DMVTF--SKKFQT--AGYFFHDP------AFRP-NKPYRQFNTWMG-DPSRALILREIIQEIKRKD---LLENVAHVGDY 380 (464)
T ss_pred CEEEe--hhhhcc--CCccccch------hccC-CCCcccccCCCC-CHHHHHHHHHHHHHHHhcC---HHHHHHHHHHH
Confidence 88766 498832 24444332 2211 011111112233 3333444334677665433 34555555667
Q ss_pred HHHHHHhc--CcE-EecC--C-CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccC
Q 009673 386 LASRLVEL--GYK-LVSG--G-SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTR 459 (529)
Q Consensus 386 l~~~L~~~--G~~-v~~~--g-t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~ 459 (529)
|.+.|++. .++ ++.. + ....+.-+.+.... ....+.+.|.+.||.+... +...|||..| ++
T Consensus 381 l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~-~~~~i~~~~~~~Gvl~~~~---------g~~~ir~~Pp-l~-- 447 (464)
T TIGR00699 381 LYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEA-KRDKLLKKARNNGVNIGGC---------GVKAIRLRPM-LV-- 447 (464)
T ss_pred HHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHH-HHHHHHHHHHHCCcEEecC---------CCCeEEEeCC-CC--
Confidence 77777653 133 2221 1 12233334443211 1345667777889998531 2357999754 43
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 009673 460 GFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 460 g~~~~d~~~la~~i~~~~ 477 (529)
++++|++++.++|.+++
T Consensus 448 -it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 448 -FQKHHADIFLEIISKII 464 (464)
T ss_pred -CCHHHHHHHHHHHHHhC
Confidence 67999999999998753
No 376
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.88 E-value=5.2e-08 Score=99.16 Aligned_cols=315 Identities=16% Similarity=0.159 Sum_probs=162.4
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc--CCCCEEEEcCCCCCccccccccccccccc
Q 009673 141 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVS 218 (529)
Q Consensus 141 ~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~ 218 (529)
.|+..+..+-......+.+..|+....- +.|.|..-.-.+..++.++- ..++.|+.+..+|-.. .+.+.
T Consensus 49 ~Gss~~~~ltn~l~~d~~~~~G~~~~~~-~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc--------~kai~ 119 (389)
T PF05889_consen 49 AGSSLLAKLTNSLVLDALRLAGLRSVKS-CFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSC--------FKAIE 119 (389)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTHTTHCE-EEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHH--------HHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHcCCccccc-eEEEecccccHHHHHHHHHhcccCCceEEEeeccccch--------HHHHH
Confidence 3444444444333345556788874221 23333332244555666663 4678888777654221 24566
Q ss_pred cccceEEEEEcccCCCCCCCCHHHHHHHhhhcCC--cEEEEcC--CCCCCCCC-HHHHHHHHHHhCCEEEEecccccccc
Q 009673 219 GTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP--KLIIAGA--SAYPRDFD-YPRMRQIADAVGALLMMDMAHISGLV 293 (529)
Q Consensus 219 ~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~p--klIi~~~--s~~p~~~d-~~~i~~ia~~~g~~livD~ah~~Gli 293 (529)
.+|....+++--..++.-..|.+.+++.+++... .+.++++ -.+|+..| +++|++||+++|++.++..|+..-..
T Consensus 120 ~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~ 199 (389)
T PF05889_consen 120 RAGLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSS 199 (389)
T ss_dssp HTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-H
T ss_pred hcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHH
Confidence 6665333333222323345678899999876543 3445553 24667555 99999999999999999998654100
Q ss_pred cc-cccCC--CCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccccCCC-CCCChHHHHHHHHHHHHHhcC
Q 009673 294 AA-SVVAD--PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQS 369 (529)
Q Consensus 294 ~~-~~~~~--~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~ 369 (529)
.. ..... -....|+++-|+-|.|.-|-||.++...+. .+...+.+. +|+- ..+|....+. -|..+..
T Consensus 200 ~~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~----~~i~~vs~~-YpGRas~sp~ld~~i----tLl~LG~ 270 (389)
T PF05889_consen 200 KCMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDP----SGILAVSKE-YPGRASASPSLDLFI----TLLSLGC 270 (389)
T ss_dssp HHHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSH----HHHHHHHHT-SHSHBTSHHHHHHHH----HHHHHHH
T ss_pred HHHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCH----HHHHHHHHH-hhhhhhcccchHHHH----HHHHHhh
Confidence 00 00000 001368999999999988888666655431 566666543 3443 2333333222 1222223
Q ss_pred chHHHHHHHHHHHHHHHHHHHHh----cCcEEecCCCCCceEE-EccCCCC----CcHHHHHHhHhcCCeEEcCCCCCCC
Q 009673 370 PEFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSDNHLVL-VDLRPMG----IDGARVEKILDMASITLNKNSVPGD 440 (529)
Q Consensus 370 ~~~~~~~~~i~~~a~~l~~~L~~----~G~~v~~~gt~~~~~~-v~~~~~~----i~~~~~~~~L~~~GI~v~~~~~Pg~ 440 (529)
.+|.....+..+.-.++.++|++ .|-.+.. ...||..+ +++.... -+..++...|...||.-.+...|+.
T Consensus 271 ~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~-~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~ 349 (389)
T PF05889_consen 271 TGYGALLKERKASFPYLKERLKKWAEEVGERLLE-TPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGG 349 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSS-STT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-CCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCC
Confidence 35556666666666667776654 4533332 22455432 3433211 1235677788777775322112221
Q ss_pred C------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 441 K------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 441 ~------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
. +.+...++-+. .+.|++++|++.+++.|+++++
T Consensus 350 ~~~tsh~~~yp~~Ylt~A----saiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 350 KKQTSHSSNYPCPYLTAA----SAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp CEEETTSS--SSSEEEEE----E-TT--HHHHHHHHHHHHHHHH
T ss_pred CcccccCCCCchHHHHHH----HHhCCCHHHHHHHHHHHHHHhC
Confidence 1 11112344441 2368999999999999998874
No 377
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.87 E-value=2.5e-06 Score=88.94 Aligned_cols=211 Identities=20% Similarity=0.210 Sum_probs=120.8
Q ss_pred HHHHHHHhhhcCCc---EEEEcC---CCCCC----CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC------
Q 009673 240 YDMLEKTAILFRPK---LIIAGA---SAYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK------ 303 (529)
Q Consensus 240 ~d~le~~i~~~~pk---lIi~~~---s~~p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~------ 303 (529)
.++|+++|..+.|. ++|+.. ..-+. ..-++++++||++||+++|+|+. ..|.--.| ..|.
T Consensus 200 a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV-~tGFGRTG---~~FA~e~~gi 275 (449)
T COG0161 200 ADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEV-ATGFGRTG---KMFACEHAGI 275 (449)
T ss_pred HHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecc-eeCCCcCc---hhhhhhhcCC
Confidence 67788888876543 444431 11121 22489999999999999999987 44432212 2221
Q ss_pred cccEEEecccccccCC--CCeEEEeeCCCcchhHHHhhhccc----ccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHH
Q 009673 304 YCDVVTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA----VFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (529)
Q Consensus 304 ~aDiv~~S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~----~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~ 376 (529)
-.|+++.+ |.|+|. ..|.+++++ ++.+.+... .+.+. .++......+|++ .|+.+.++ ...
T Consensus 276 ~PDi~~~a--KGLT~GY~Pl~a~l~~~------~I~~~~~~~~~~~f~HG~TYsghPlacAaAla-~L~i~e~e---~l~ 343 (449)
T COG0161 276 VPDILCLA--KGLTGGYLPLSAVLTSD------RIYEAFSDGDAGAFMHGHTYSGNPLACAAALA-NLDILEEE---DLL 343 (449)
T ss_pred CCCeeeec--ccccccchhhHhHhhhH------HHHHHHhcccCCeeccCCccccCHHHHHHHHH-HHHHHHhc---CHH
Confidence 25888866 998653 225555555 455544322 22222 2232232333332 46655443 446
Q ss_pred HHHHHHHHHHHHHHHh--cCcEEecCCC-CCceEEEccCCC-C-Cc------HHHHHHhHhcCCeEEcCCCCCCCCCCCC
Q 009673 377 NKVVSNCRALASRLVE--LGYKLVSGGS-DNHLVLVDLRPM-G-ID------GARVEKILDMASITLNKNSVPGDKSALV 445 (529)
Q Consensus 377 ~~i~~~a~~l~~~L~~--~G~~v~~~gt-~~~~~~v~~~~~-~-i~------~~~~~~~L~~~GI~v~~~~~Pg~~~~~~ 445 (529)
+++.+...+|.+.|++ .+.+.+.+-. ...+.-+.+... + .. +..+.+.+.+.|+.+++. |
T Consensus 344 ~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~---g------ 414 (449)
T COG0161 344 ERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL---G------ 414 (449)
T ss_pred HHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec---C------
Confidence 6777778888888886 2333343211 112222333211 1 01 456778888999999642 2
Q ss_pred CCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 446 PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 446 ~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
..+=+.-|.+ .+++|++++.+.+.++++..
T Consensus 415 -~~i~~~PPli----it~~eid~l~~~l~~al~~~ 444 (449)
T COG0161 415 -DVIYLMPPLI----ITREEIDELVDALREALDET 444 (449)
T ss_pred -CEEEEcCCcc----CCHHHHHHHHHHHHHHHHHH
Confidence 2344444433 56899999999999998855
No 378
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.85 E-value=2.1e-06 Score=91.46 Aligned_cols=209 Identities=19% Similarity=0.162 Sum_probs=111.4
Q ss_pred HHHHHHHhhh--cCCcEEEEcC-CCCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEE
Q 009673 240 YDMLEKTAIL--FRPKLIIAGA-SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVV 308 (529)
Q Consensus 240 ~d~le~~i~~--~~pklIi~~~-s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv 308 (529)
++++++.+.. .++.+||+.. ...++ ...+++|+++|++||+++|+|++|. |+-..|.. . ..+. ..|++
T Consensus 205 l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~a~~~~gv~PDi~ 283 (431)
T TIGR03251 205 LRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVQPDIV 283 (431)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccchHHHHHhcCCCCCEE
Confidence 4555666643 2456777752 12222 2358999999999999999999976 43222210 0 0111 36888
Q ss_pred EecccccccCCCCeEEEeeCCCcchhHHHhh-hc-ccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673 309 TTTTHKSLRGPRGGMIFFKKDPVLGVELESA-IN-NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 386 (529)
Q Consensus 309 ~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~-i~-~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l 386 (529)
+. .|.+ |-+|++..++ . .++... .. .....++.++.. ..+++..++|+.+.+.++ .+++.+..++|
T Consensus 284 ~~--gK~~--~~~g~~~~~~-i---~~~~~~~~~~~~~~~~T~~gnp-l~~aaa~a~L~~l~~~~l---~~~~~~~g~~l 351 (431)
T TIGR03251 284 AF--GKKT--QVCGIMAGRR-V---DEVADNVFAVPSRLNSTWGGNL-VDMVRATRILEIIEEERL---VDNARVQGAHL 351 (431)
T ss_pred Ee--cccC--ccceEEecch-H---HHhhhhcccCccccCCCCCCCH-HHHHHHHHHHHHHHhcCH---HHHHHHHHHHH
Confidence 75 5876 5567775543 0 011111 11 111112233323 334444446776654333 34555556666
Q ss_pred HHHHHhc--CcE-EecCCC-CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673 387 ASRLVEL--GYK-LVSGGS-DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 462 (529)
Q Consensus 387 ~~~L~~~--G~~-v~~~gt-~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~ 462 (529)
.+.|++. .+. ++..-+ ...+..+.+.... ....+.+.|.+.||.+.. . ....+|+..+.. ++
T Consensus 352 ~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~-~~~~~~~~l~~~Gvl~~~----~-----g~~~lr~~P~l~----~t 417 (431)
T TIGR03251 352 LARLHELAAEFPHLVSNPRGRGLMCAFDLPSTA-DRDEVIRQLYREGVLLLG----C-----GERSIRFRPPLT----VT 417 (431)
T ss_pred HHHHHHHHHhCccceecccccceeEEEEeCCHH-HHHHHHHHHHhCCeEEec----C-----CCCeEEEECCcc----CC
Confidence 6666541 122 222111 1233344443211 234577777889999842 1 235699976543 56
Q ss_pred HHHHHHHHHHHHH
Q 009673 463 EKEFVAIADFIHE 475 (529)
Q Consensus 463 ~~d~~~la~~i~~ 475 (529)
++|++++++.|.+
T Consensus 418 ~~eid~~l~~l~~ 430 (431)
T TIGR03251 418 REEIDAAIDAIRR 430 (431)
T ss_pred HHHHHHHHHHHHh
Confidence 8999999999875
No 379
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.80 E-value=1e-07 Score=96.23 Aligned_cols=237 Identities=18% Similarity=0.165 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh---cCCC----------CEEEEcCCCCCccccccccccc
Q 009673 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---LKPH----------DRIMGLDLPHGGHLSHGFMTPK 214 (529)
Q Consensus 148 ~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al---l~pG----------D~Vl~~~~~~~g~~s~g~~~~~ 214 (529)
.+|..+.....++.|.+... ..+....|+-+|..++.+- .-|+ +-|+..+ ..+|+|.-
T Consensus 141 lmE~~vl~km~~ivGw~~~~--DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtS--eesHYSi~----- 211 (510)
T KOG0629|consen 141 LMEEEVLAKMREIVGWEEGG--DGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTS--EESHYSIK----- 211 (510)
T ss_pred eehHHHHHHHHHHhCCCCCC--CceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEec--ccchhhHH-----
Confidence 34555556777788888642 2455667776666555543 1122 3444433 23454422
Q ss_pred cccccccceE-EEEEcccCCCCCCCCHHHHHHHhhhcC-----CcEEEEc--CCCCCCCCCHHHHHHHHHHhCCEEEEec
Q 009673 215 RRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAG--ASAYPRDFDYPRMRQIADAVGALLMMDM 286 (529)
Q Consensus 215 ~~i~~~g~~~-~~v~~~v~~~~~~iD~d~le~~i~~~~-----pklIi~~--~s~~p~~~d~~~i~~ia~~~g~~livD~ 286 (529)
+...+.|.+. ..+.++.+ +.|.+++++||+.|.+.+ |-++-++ .+.++-..|++.|+++|++|+.|+++|+
T Consensus 212 kaAa~lg~gtd~c~~v~t~-e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDA 290 (510)
T KOG0629|consen 212 KAAAFLGLGTDHCIKVKTD-ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDA 290 (510)
T ss_pred HHHHHhccCCceeEEeccc-ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeec
Confidence 2334445332 34555555 579999999999987644 3333333 2334447899999999999999999999
Q ss_pred ccccccccccccCC---CCCcccEEEecccccccCCC-CeEEEeeCCCcchhHHHhhhcc---------------cc---
Q 009673 287 AHISGLVAASVVAD---PFKYCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVELESAINN---------------AV--- 344 (529)
Q Consensus 287 ah~~Gli~~~~~~~---~~~~aDiv~~S~hK~l~Gpr-gG~i~~~~~~~~~~~l~~~i~~---------------~~--- 344 (529)
|..-|+.-...+.. .++.+|.|+.+.||+++.|- .+.++.+.+ .+...-+. ..
T Consensus 291 AwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~-----gll~~Cn~~~A~YLFq~dK~YdvS~DTg 365 (510)
T KOG0629|consen 291 AWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREE-----GLLQRCNQMSAIYLFQQDKFYDVSYDTG 365 (510)
T ss_pred ccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHH-----HHHHhhcccchhhhhccCceeecccccc
Confidence 97766654332222 22468999999999986554 476666654 22221110 00
Q ss_pred cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecC
Q 009673 345 FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG 400 (529)
Q Consensus 345 ~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~ 400 (529)
.-.+|.|.|.... -++..++--...+|++.+++..+++++|.+.|++. |+..+..
T Consensus 366 dK~iQCGRh~D~F-KlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~ 421 (510)
T KOG0629|consen 366 DKAIQCGRHVDVF-KLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFE 421 (510)
T ss_pred cchhhcCccccHH-HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhc
Confidence 1123555554332 34444554445678999999999999999999984 5565543
No 380
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.76 E-value=6.4e-07 Score=87.16 Aligned_cols=275 Identities=19% Similarity=0.218 Sum_probs=157.3
Q ss_pred eeeecCChHHHHHHHHH--hhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc-CCCCCCCCHHHHHHH
Q 009673 170 VNVQPLSGSPANFEVYT--AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKT 246 (529)
Q Consensus 170 ~~V~~~sGs~A~~~~l~--all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v-~~~~~~iD~d~le~~ 246 (529)
..||..||+.|+..... +-.-+..+|.+..|++..|-.-. .-.| +..+-.|++ |.++..+|++.+...
T Consensus 101 ~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if--------~~aG-f~tv~~Y~yWd~~~k~~d~e~~Lsd 171 (410)
T KOG1412|consen 101 FGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIF--------EKAG-FTTVATYPYWDAENKCVDLEGFLSD 171 (410)
T ss_pred cceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHH--------HHcC-CceeeeeeeecCCCceecHHHHHHH
Confidence 35888999988886432 22234667888999988773211 1122 123333443 335568999999888
Q ss_pred hhhcCC-cEE-EEc-CCCCCC-C----CCHHHHHHHHHHhCCEEEEecccccccccccccCCC--C----C-ccc-EEEe
Q 009673 247 AILFRP-KLI-IAG-ASAYPR-D----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--F----K-YCD-VVTT 310 (529)
Q Consensus 247 i~~~~p-klI-i~~-~s~~p~-~----~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~--~----~-~aD-iv~~ 310 (529)
++. .| +.| ++. .-+||+ . ..+..|++..++.+.+.+.|.| |-|+..++..... + + +.. +|+-
T Consensus 172 l~~-APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiA-YQGfASGD~~~DawAiR~fV~~g~e~fv~Q 249 (410)
T KOG1412|consen 172 LES-APEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIA-YQGFASGDLDADAWAIRYFVEQGFELFVCQ 249 (410)
T ss_pred Hhh-CCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehh-hcccccCCccccHHHHHHHHhcCCeEEEEh
Confidence 876 55 333 333 335665 2 2378889988999999999988 6676544432211 1 1 222 7788
Q ss_pred cccccc--cCCCCeEE--EeeCCCcchhHHHhh----hccc-ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 009673 311 TTHKSL--RGPRGGMI--FFKKDPVLGVELESA----INNA-VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381 (529)
Q Consensus 311 S~hK~l--~GprgG~i--~~~~~~~~~~~l~~~----i~~~-~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~ 381 (529)
||.|.+ .+.|.|-+ +.+++. ....+... ++.. ..|..+|..-.+.+...-.-.++. ....+.+..++.+
T Consensus 250 SFaKNfGlYneRvGnltvv~~n~a-~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W-~~sik~MssRI~~ 327 (410)
T KOG1412|consen 250 SFAKNFGLYNERVGNLTVVVNNPA-VIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQW-IQSIKTMSSRIKK 327 (410)
T ss_pred hhhhhcccccccccceEEEecChh-HHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHH-HHHHHHHHHHHHH
Confidence 999985 67888743 233321 00111111 2211 123223332222221111111111 1234566677777
Q ss_pred HHHHHHHHHHhcCcEEecCCCCCceE--EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccC
Q 009673 382 NCRALASRLVELGYKLVSGGSDNHLV--LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTR 459 (529)
Q Consensus 382 ~a~~l~~~L~~~G~~v~~~gt~~~~~--~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~ 459 (529)
.+.+|++.|..+| ++|+=.|+. +--+.-.|++...+..+.+.+.|.+-. .| ||+..
T Consensus 328 MR~aLrd~L~aL~----TPGtWDHI~~QiGMFSyTGLtp~qV~~li~~h~vyLl~-----------~G--RInis----- 385 (410)
T KOG1412|consen 328 MRTALRDHLVALK----TPGTWDHITQQIGMFSYTGLTPAQVDHLIENHKVYLLS-----------DG--RINIS----- 385 (410)
T ss_pred HHHHHHHHHHhcC----CCCcHHHHHhhccceeecCCCHHHHHHHHHhceEEEec-----------CC--cEeee-----
Confidence 7888888887643 344323421 011223477888898888999999832 23 55443
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 009673 460 GFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 460 g~~~~d~~~la~~i~~~~~~ 479 (529)
|+....++++|.+|++++..
T Consensus 386 GLN~~NveyVAkAIde~Vr~ 405 (410)
T KOG1412|consen 386 GLNMKNVEYVAKAIDETVRA 405 (410)
T ss_pred ccccccHHHHHHHHHHHHHh
Confidence 45568999999999998874
No 381
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.75 E-value=2.2e-06 Score=96.64 Aligned_cols=274 Identities=17% Similarity=0.093 Sum_probs=156.3
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH----HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEE
Q 009673 153 CQKRALAAFNLDENKWGVNVQPLSGS----PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (529)
Q Consensus 153 a~~~la~~~g~~~~~~~~~V~~~sGs----~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~ 228 (529)
-+..+++++|++.. |-...-|. +|+.++...--+...+|++.+-.|+-.+.- . .....+.+++++.
T Consensus 129 ~Qtmi~~LtGm~va----NASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v---~---~t~~~~~g~~i~~ 198 (954)
T PRK12566 129 FQQMTIDLTGLDLA----NASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSV---L---RTRAEGFGFELVV 198 (954)
T ss_pred HHHHHHHHhCchhh----hhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHH---H---HHhhhcCCcEEEE
Confidence 35788999999853 22223343 333333222112246788877555322110 0 0001122223332
Q ss_pred cccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-ccc
Q 009673 229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 306 (529)
Q Consensus 229 ~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aD 306 (529)
+++++.+.+ ++-.+++.+|++-+ +.|+++|.++++++|+++++ .+ ..+.......|-+ ++|
T Consensus 199 ------------~~~~~~~~~-~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~~-~~---d~laL~ll~~Pge~GAD 261 (954)
T PRK12566 199 ------------DAVDNLAAH-AVFGALLQYPDTHGEIRDLRPLIDQLHGQQALACV-AA---DLLSLLVLTPPGELGAD 261 (954)
T ss_pred ------------cchhhcCCC-CEEEEEEECCCCceEEccHHHHHHHHHHcCCEEEE-Ee---CHHHHhCCCChhhcCCc
Confidence 334444444 56678888887665 66999999999999998663 22 2233333444555 899
Q ss_pred EEEecccc-----cccCCCCeEEEeeCCC-----c-----------------chhHHHhhhcccccCCCCCCChHHHHHH
Q 009673 307 VVTTTTHK-----SLRGPRGGMIFFKKDP-----V-----------------LGVELESAINNAVFPGLQGGPHNHTIGG 359 (529)
Q Consensus 307 iv~~S~hK-----~l~GprgG~i~~~~~~-----~-----------------~~~~l~~~i~~~~~p~~~g~p~~~~iaa 359 (529)
|++++.+- .++||..|++.++++. + .+..-.+.|++-.-....+ ....+.|
T Consensus 262 I~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNIC--T~qaL~A 339 (954)
T PRK12566 262 VVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNIC--TAQVLLA 339 (954)
T ss_pred EEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhh--HHHHHHH
Confidence 99886553 4688888999998741 0 0001111222111000011 1223344
Q ss_pred HHHHH--HHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce--EEEccCCCCCcHHHHHHhHhcCCeEEcCC
Q 009673 360 LAVCL--KHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL--VLVDLRPMGIDGARVEKILDMASITLNKN 435 (529)
Q Consensus 360 la~al--~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~--~~v~~~~~~i~~~~~~~~L~~~GI~v~~~ 435 (529)
+.+++ -....+++++..+++..++.+|++.|.+.|+++... .++ +.+++ +.+.+++.+.-.+.||-++..
T Consensus 340 ~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~---~fF~~~~v~~---~~~~~~~~~~a~~~~~n~r~~ 413 (954)
T PRK12566 340 NIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLNR---HFFDTLTLEV---GGAQAAIIESAEAARINLRIL 413 (954)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCccccC---CccceEEEEc---cCCHHHHHHHHHHCCCeeEEe
Confidence 43332 233445678889999999999999999999998653 233 33344 113456666666778887642
Q ss_pred CCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673 436 SVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 474 (529)
Q Consensus 436 ~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~ 474 (529)
..+.+.|++...+ +++|++.+.+.+.
T Consensus 414 ---------~~~~~~~s~de~~----~~~~~~~~~~~f~ 439 (954)
T PRK12566 414 ---------GRGRLGVSLDETC----DEATVARLFDIFL 439 (954)
T ss_pred ---------CCCeEEEEeCCCC----CHHHHHHHHHHhc
Confidence 1345778877654 4799999999884
No 382
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.75 E-value=1.6e-06 Score=87.08 Aligned_cols=182 Identities=19% Similarity=0.251 Sum_probs=108.7
Q ss_pred CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC----cccEEEecccccc-cCCCCeEEEeeCCCcchhHHHhhhc
Q 009673 267 DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAIN 341 (529)
Q Consensus 267 d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~aDiv~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~ 341 (529)
-+++..++|+++|.++|.|++|. |+--.| +-..|+ -.||++ +.|.+ .|...|.++..+ ++.+-++
T Consensus 234 Ylka~~~~v~k~Ggl~IaDEVqt-GfGRtG-~~wgfe~h~v~PDIvT--mAKgiGnG~Pl~AVvtt~------EIa~v~~ 303 (442)
T KOG1404|consen 234 YLKAAYKVVRKRGGLFIADEVQT-GFGRTG-HMWGFESHGVVPDIVT--MAKGIGNGFPLGAVVTTP------EIADVLN 303 (442)
T ss_pred HHHHHHHHHHHcCCEEEehhhhh-cccccc-ccccccccCCCccHHH--HHhhccCCCcceeeecCH------HHHHHHH
Confidence 48999999999999999999864 332222 222333 246765 45998 455567777777 6777666
Q ss_pred ccc-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecCCCCCceE----EEccC--
Q 009673 342 NAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGSDNHLV----LVDLR-- 412 (529)
Q Consensus 342 ~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~gt~~~~~----~v~~~-- 412 (529)
+.. +..+.|+..+...++++ .|+-+.+ ++.+++..+...+|.+.|.+ .+.+++.+-....+. +++-+
T Consensus 304 ~~~~~fnTyggnP~a~avg~a-VL~Vike---e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~ 379 (442)
T KOG1404|consen 304 QKSSHFNTYGGNPVACAVGLA-VLKVIKE---ENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSE 379 (442)
T ss_pred hccccccccCCCchhHHHHHH-HHHHHHH---HhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCC
Confidence 554 23334444444444544 4554433 34455555556677777765 345555431112222 22222
Q ss_pred CCC---CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673 413 PMG---IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473 (529)
Q Consensus 413 ~~~---i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i 473 (529)
+.. --+..+-+.+.+.|+.|+++.+-| ..+||.-| ++ +|.+|++.+++..
T Consensus 380 ~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G-------~vfriaPP-lc---iT~edi~f~~~~~ 432 (442)
T KOG1404|consen 380 PKPPATAEGAVIGEQCKELGVLVGKGGIHG-------NVFRIAPP-LC---ITKEDIDFAVEYF 432 (442)
T ss_pred CCCcchHHHHHHHHHHHHhCeeeecccccc-------eEEEecCC-ee---ccHHHHHHHHHHH
Confidence 111 113456788899999997765443 37999855 43 6789997777766
No 383
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.74 E-value=7.6e-06 Score=87.34 Aligned_cols=211 Identities=18% Similarity=0.164 Sum_probs=114.2
Q ss_pred HHHHHHHhhh--cCCcEEEEcC--CCCCC----CCCHHHHHHHHHHhCCEEEEeccccccccccccc--CCCCC-cccEE
Q 009673 240 YDMLEKTAIL--FRPKLIIAGA--SAYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVV 308 (529)
Q Consensus 240 ~d~le~~i~~--~~pklIi~~~--s~~p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~-~aDiv 308 (529)
++++++.+.. .++.+||+.. .+.+. ...+++|+++|++||+++|+|+++. |+--.|.. ..-+. ..|++
T Consensus 212 ~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv 290 (443)
T PRK08297 212 LAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVRPDIV 290 (443)
T ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCccchHHHHHhcCCCCCEE
Confidence 4556666753 2456777752 12221 2358999999999999999999964 43111110 00011 36888
Q ss_pred EecccccccCCCCeEEEeeCCCcchhHHH-hhhc-ccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673 309 TTTTHKSLRGPRGGMIFFKKDPVLGVELE-SAIN-NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 386 (529)
Q Consensus 309 ~~S~hK~l~GprgG~i~~~~~~~~~~~l~-~~i~-~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l 386 (529)
++ .|.+ |-+|++..++ . .++. ..+. .....++.++... .+++..++++.+.++ +..+++.+..+++
T Consensus 291 ~~--gK~l--~~~a~l~~~~-i---~~~~~~~~~~~~~~~~T~~gnpl-~~aaa~a~L~~l~~~---~l~~~~~~~g~~l 358 (443)
T PRK08297 291 AF--GKKT--QVCGIMAGRR-V---DEVEDNVFAVSSRINSTWGGNLV-DMVRARRILEVIEED---GLVENAARQGEYL 358 (443)
T ss_pred Ee--cccc--cccceecchH-H---HHhhhhhccCccccCCCCCccHH-HHHHHHHHHHHHHhc---CHHHHHHHHHHHH
Confidence 75 5987 3456665543 0 0111 1111 0111122333233 333333456655443 3455666667777
Q ss_pred HHHHHhc--CcEEe---cCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCC
Q 009673 387 ASRLVEL--GYKLV---SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF 461 (529)
Q Consensus 387 ~~~L~~~--G~~v~---~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~ 461 (529)
.+.|++. .++.+ ..+. ..++.+.+.... ....+.+.|.+.||.+. |. ....+||..+ ++ +
T Consensus 359 ~~~L~~l~~~~~~~~~~vrg~-G~~~~i~~~~~~-~~~~~~~~l~~~Gvl~~----~~-----~~~~lr~~P~-l~---~ 423 (443)
T PRK08297 359 LARLEELAAEFPAVVSNVRGR-GLMCAFDLPTTA-DRDEVIRRLWEEGVLVL----PC-----GERSIRFRPA-LT---V 423 (443)
T ss_pred HHHHHHHHHHCCCcceeeecc-ceEEEEEecCHH-HHHHHHHHHHHCCEEEe----cC-----CCCeEEEECC-cc---C
Confidence 7777552 12211 1121 334445553211 23456677778999983 32 1356898644 33 6
Q ss_pred CHHHHHHHHHHHHHHHH
Q 009673 462 SEKEFVAIADFIHEGVE 478 (529)
Q Consensus 462 ~~~d~~~la~~i~~~~~ 478 (529)
+++|++++++.+.+++.
T Consensus 424 t~~eid~~l~~l~~~l~ 440 (443)
T PRK08297 424 TTEEIDAAIDALRRALP 440 (443)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 79999999999998875
No 384
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.69 E-value=1.1e-06 Score=85.40 Aligned_cols=340 Identities=14% Similarity=0.157 Sum_probs=190.0
Q ss_pred CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH-HHHhhcC
Q 009673 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE-VYTAILK 190 (529)
Q Consensus 112 n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~-~l~all~ 190 (529)
..+|+.+.+.+...| ++|+.-.....+.|-.+|+.- .+-+...++.+.|+..+++. +.+.-.+|.. .+.++.+
T Consensus 77 GLmPK~t~~~~~~eL-DkWak~av~gH~~GkvPW~~~-De~il~l~~~iVGA~e~Eva----vmNsLTvNlh~Ll~sFyK 150 (465)
T KOG3846|consen 77 GLMPKSTRNSINAEL-DKWAKCAVEGHFKGKVPWVSI-DEPILPLLAPIVGAQENEVA----VMNSLTVNLHSLLISFYK 150 (465)
T ss_pred ccCchhhHhHHHHHH-HHHHhhhhhcccccccceeec-chhhhhhhhhhccCCchhhh----hHhhhhhHHHHHHHHhcC
Confidence 357899988888776 455431111111222233321 12344677889999887542 2333345554 4557777
Q ss_pred CCC---EEEEcCCCCCccccccccccccccccccceEEEEEcccCCC--CCCCCHHHHHHHhhhcCCc--EEEEcCCCCC
Q 009673 191 PHD---RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAILFRPK--LIIAGASAYP 263 (529)
Q Consensus 191 pGD---~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~--~~~iD~d~le~~i~~~~pk--lIi~~~s~~p 263 (529)
|-. +|+. +..+..+..|..+ ..+...|...+-..+.+.+. ...+..+++.+.|+.+.-. +|+++...|-
T Consensus 151 PTekR~KILl---E~kaFPSDhYAie-sQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyY 226 (465)
T KOG3846|consen 151 PTEKRFKILL---EKKAFPSDHYAIE-SQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYY 226 (465)
T ss_pred Ccchhhhhhh---ccCCCCchHHHHH-hhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceee
Confidence 754 4553 3344444444322 23344444222112222222 2467788888888774433 3444444433
Q ss_pred C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccc-cCCCC-eEEEeeCCC---------
Q 009673 264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL-RGPRG-GMIFFKKDP--------- 330 (529)
Q Consensus 264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l-~Gprg-G~i~~~~~~--------- 330 (529)
+ .+|+.+|..--+..|++|=.|-||+.|-+....+.. ++|+.+....|.+ +|+.| |-+++..+.
T Consensus 227 TGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdW---gVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~ 303 (465)
T KOG3846|consen 227 TGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDW---GVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLA 303 (465)
T ss_pred cccccchhhhhhcccCCCcEechhhhhhhcCCceEEeec---CCceEEEeeecccccCCCccceeeeehhhhcchhhHHh
Confidence 3 678988886666679999999999998775444444 5899999999988 56655 555555431
Q ss_pred cch-hHHHhhh--c------ccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCc-----
Q 009673 331 VLG-VELESAI--N------NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGY----- 395 (529)
Q Consensus 331 ~~~-~~l~~~i--~------~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~----- 395 (529)
++| .+..+++ + .....+-+++|.....+|+-.+|+.......++.+++..-...+|...++. .|.
T Consensus 304 GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~r 383 (465)
T KOG3846|consen 304 GWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLR 383 (465)
T ss_pred hhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhh
Confidence 111 1222221 1 112223367888888888888887654333444444444434433333332 232
Q ss_pred ------EEecCC-CC--CceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc-CCCccCCCCHHH
Q 009673 396 ------KLVSGG-SD--NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS-PAMTTRGFSEKE 465 (529)
Q Consensus 396 ------~v~~~g-t~--~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~-~~~tt~g~~~~d 465 (529)
.++++. ++ .-...+-+.. +...+...|.++|+.+++. .|.+||+.- |-+++ -.|
T Consensus 384 t~Kl~~~IiTP~~~~erGcQLsl~Fss---p~~~vfqeL~krGv~~DkR---------~PNvIRvAPvpLYN~----f~D 447 (465)
T KOG3846|consen 384 TEKLFFTIITPTSTDERGCQLSLYFSS---PTPKVFQELHKRGVIGDKR---------RPNVIRVAPVPLYNT----FSD 447 (465)
T ss_pred hcceeEEEeCCcccccccceEEEEeCC---CchHHHHHHHHcCeecccc---------CCCceEeecchhhcc----HHH
Confidence 233331 10 0111121221 2367888999999998764 468899864 44444 588
Q ss_pred HHHHHHHHHHHHHHH
Q 009673 466 FVAIADFIHEGVEIT 480 (529)
Q Consensus 466 ~~~la~~i~~~~~~~ 480 (529)
+......+.+++.+.
T Consensus 448 vy~f~n~L~e~~d~~ 462 (465)
T KOG3846|consen 448 VYIFVNALNEAMDKL 462 (465)
T ss_pred HHHHHHHHHHHHHHh
Confidence 888888888877643
No 385
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.67 E-value=9.2e-07 Score=87.27 Aligned_cols=351 Identities=19% Similarity=0.206 Sum_probs=197.5
Q ss_pred hhcccCChHHHHHHHHHHHHhh--cceeEecC-------CCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHH
Q 009673 81 YSLGEADPEVCEIITKEKERQF--KSLELIAS-------ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELET 151 (529)
Q Consensus 81 ~~l~~~d~~~~~~~~~e~~~~~--~~i~L~as-------en~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~ 151 (529)
+.+.-.+|+..-=+.+..++.. .-|||.++ ..++-+.|++|-.........--| ..-.-+.++..
T Consensus 29 s~V~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEY------lpI~Gl~eF~k 102 (427)
T KOG1411|consen 29 SHVEMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEY------LPITGLAEFNK 102 (427)
T ss_pred hcCCCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchh------ccccchHHHHH
Confidence 4455556663222222233332 34777753 235678888887644431111111 11112334443
Q ss_pred HHHHHHHHHcCCCCC-----CCceeeecCChHHHHH--HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceE
Q 009673 152 LCQKRALAAFNLDEN-----KWGVNVQPLSGSPANF--EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF 224 (529)
Q Consensus 152 ~a~~~la~~~g~~~~-----~~~~~V~~~sGs~A~~--~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~ 224 (529)
++. +=+||-+.+ .+ +.||..|||.|+- +-+.+..-|+..|.+++|+++.|.. -....|...
T Consensus 103 ~sa---kLa~G~~s~~ik~~Ri-~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~--------if~~ag~~~ 170 (427)
T KOG1411|consen 103 LSA---KLALGDNSPVIKEKRI-VTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKN--------IFKDAGLPV 170 (427)
T ss_pred HHH---HHhhcCCchhhhccce-eEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCc--------cccccCcce
Confidence 332 234565432 22 5688899986554 4566666789999999999988742 112344433
Q ss_pred EEEEcccCCCCCCCCHHHHHHHhhhcCCc-EEEEc-CCCCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccc
Q 009673 225 ESMPYRLDESTGLVDYDMLEKTAILFRPK-LIIAG-ASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV 297 (529)
Q Consensus 225 ~~v~~~v~~~~~~iD~d~le~~i~~~~pk-lIi~~-~s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~ 297 (529)
+...| .++++..+|++.+.+.+.+.-.. .|++- .-+||+ ...+++|.++.++.+.+-+.|+| |-|+-.++.
T Consensus 171 ~~yrY-yd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmA-YQGfaSG~~ 248 (427)
T KOG1411|consen 171 KFYRY-YDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMA-YQGFASGDL 248 (427)
T ss_pred eeeee-ccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhh-hcccccCCc
Confidence 33333 35677889999987777762233 33332 345555 33588999999999999999998 666554432
Q ss_pred cCCC-----C--Cccc-EEEecccccc--cCCCCeEE--EeeCCCcchhHHHhhhc----ccccCCCCCCChHH--HHHH
Q 009673 298 VADP-----F--KYCD-VVTTTTHKSL--RGPRGGMI--FFKKDPVLGVELESAIN----NAVFPGLQGGPHNH--TIGG 359 (529)
Q Consensus 298 ~~~~-----~--~~aD-iv~~S~hK~l--~GprgG~i--~~~~~~~~~~~l~~~i~----~~~~p~~~g~p~~~--~iaa 359 (529)
...- | .+-+ ++.-|+-|.| .|-|.|.+ ++++. +...+++ ..+.| .+++|..| .|++
T Consensus 249 d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~a-----d~A~rV~SQlk~liRp-mYSnPP~hGArIv~ 322 (427)
T KOG1411|consen 249 DKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDA-----DEAKRVESQLKILIRP-MYSNPPLHGARIVA 322 (427)
T ss_pred hhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCH-----HHHHHHHHHHHHHhcc-cccCCCccchhhhh
Confidence 2111 1 1333 5678999986 56677653 44443 3433332 22223 23444433 3333
Q ss_pred HHHH---HHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe-cCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCC
Q 009673 360 LAVC---LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV-SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKN 435 (529)
Q Consensus 360 la~a---l~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~-~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~ 435 (529)
.... |+.--..+.+-+..+++..++.|.+.|...|-... ..-+ ..+-++.+ .|++.++++.+-.++.|...+.
T Consensus 323 ~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~-~QIGMF~f--Tgl~peQv~~l~ke~~iYmT~d 399 (427)
T KOG1411|consen 323 TILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHIT-KQIGMFCF--TGLNPEQVDWLTKEYHIYLTKD 399 (427)
T ss_pred hccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHH-Hhhheeee--cCCCHHHHHHHHhhheeeeccC
Confidence 2211 11100123466778888888888888887654320 0000 01122222 4677889988889999987432
Q ss_pred CCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 436 SVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 436 ~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
-|||...++ ...+.+++++|+.+.+
T Consensus 400 -------------GRiS~aG~s-----s~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 400 -------------GRISMAGLS-----SSNVPYLADAIHAVTK 424 (427)
T ss_pred -------------ceEeecccc-----ccCCcccchhhHhHhc
Confidence 277765544 4778899999987754
No 386
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.62 E-value=2e-05 Score=89.37 Aligned_cols=213 Identities=14% Similarity=0.052 Sum_probs=112.9
Q ss_pred HHHHHHhhh-------cCCcEEEEcCC--CC-CCC----CCHHHHHHHHHHhCCEEEEecccccccccccc-cC-CCCC-
Q 009673 241 DMLEKTAIL-------FRPKLIIAGAS--AY-PRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK- 303 (529)
Q Consensus 241 d~le~~i~~-------~~pklIi~~~s--~~-p~~----~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~-~~~~- 303 (529)
+.+++.+.. .+..+||+..- .. +.. .-+++++++|++||+++|+|+.+ .|+--.|. .. .-+.
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~-TGfGRtG~~fa~e~~gv 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVF-TGLWRLGVESAWELLGC 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecc-cCCCcccchhhHHhcCC
Confidence 456666642 23456666531 22 221 23789999999999999999984 45422221 00 0111
Q ss_pred cccEEEecccccccCC--CCeEEEeeCCCcchhHHHhhhcc-----cccCC-CCCCChHHHHHHHHHHHHHhcCchH-HH
Q 009673 304 YCDVVTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINN-----AVFPG-LQGGPHNHTIGGLAVCLKHAQSPEF-KV 374 (529)
Q Consensus 304 ~aDiv~~S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~-----~~~p~-~~g~p~~~~iaala~al~~~~~~~~-~~ 374 (529)
..||++.+ |.|+|. ..|.+++++ ++.+.+.. ..+.+ .+++ |....++..++|+.+.+++. ..
T Consensus 646 ~PDIi~~g--KgLtgG~~Plaa~l~~~------~I~~~f~~~~~~~~~~hg~Ty~g-npl~cAaala~L~~~~~~~~~~~ 716 (817)
T PLN02974 646 KPDIACYA--KLLTGGLVPLAATLATE------EVFEAFRGPSKLDALLHGHSYTA-HPMGCAAAAKALQWYKDPSTNPN 716 (817)
T ss_pred CCCEEeec--ccccCCCCccEEEEEcH------HHHHhhccccccCCcccCCCCCc-CHHHHHHHHHHHHHHHcccHHHH
Confidence 36899877 999653 567777877 56655531 11122 2333 33333333346777665432 22
Q ss_pred HHHHHHHHHHHHHHHHHh--cCcEEecCCC-CCceEEEccCCC----CCc---HHHHHHhHh-cCCeEEcCCCCCCCCCC
Q 009673 375 YQNKVVSNCRALASRLVE--LGYKLVSGGS-DNHLVLVDLRPM----GID---GARVEKILD-MASITLNKNSVPGDKSA 443 (529)
Q Consensus 375 ~~~~i~~~a~~l~~~L~~--~G~~v~~~gt-~~~~~~v~~~~~----~i~---~~~~~~~L~-~~GI~v~~~~~Pg~~~~ 443 (529)
..++..+....+.+.|.+ ..++.+.+-. ..-+.-+.+... +.+ +..+.+.+. +.||.+...
T Consensus 717 l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~-------- 788 (817)
T PLN02974 717 LIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL-------- 788 (817)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec--------
Confidence 233333333334444421 1122222100 112223333211 111 234666666 899998531
Q ss_pred CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 444 LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 444 ~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
.+.||+-.|.++ ++++++++.+.|.+.+
T Consensus 789 --Gnvi~l~pP~~i----~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 789 --GNVVYLMCGPTT----SPETCTRLLRKVYRRL 816 (817)
T ss_pred --CCEEEEeCCCCC----CHHHHHHHHHHHHHHh
Confidence 246888766655 4899999999998765
No 387
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.48 E-value=5.3e-05 Score=76.90 Aligned_cols=250 Identities=18% Similarity=0.190 Sum_probs=127.7
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
...|+|.+++..-+ .+..+-..+ ++. ...++ +.+.+.+..+-...+ -.....|||+||..++..-.
T Consensus 72 hanpev~ral~~q~-~k~~hs~~~--~~t----~eav~--l~~~l~~~~~~~~~~--rvff~nsGTeAne~ALK~Ark~~ 140 (433)
T KOG1401|consen 72 HANPEVARALAEQA-KKLGHSSNG--YFT----LEAVE--LEEVLSAVLGKGSAE--RVFFCNSGTEANETALKFARKFT 140 (433)
T ss_pred CCCHHHHHHHHHHH-hhheeccCc--ccc----HHHHH--HHHHHHhcccCCCcc--EEEEecCCcHHHHHHHHHHHHhh
Confidence 44788888887654 233221111 111 11222 235555555332211 12346899999998875332
Q ss_pred ---CCCCE--EEEcCCCCCccccccccccccccccccceEEEEEcccCCCC---CCCCHHHHHHHhhhcC--CcEEEEcC
Q 009673 190 ---KPHDR--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST---GLVDYDMLEKTAILFR--PKLIIAGA 259 (529)
Q Consensus 190 ---~pGD~--Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~---~~iD~d~le~~i~~~~--pklIi~~~ 259 (529)
.|-++ ++.+.-.|-|+- .|..... ..+..+..+++ +.++- ..-|..++++.+..++ ..+||+..
T Consensus 141 ~~~~~~~~t~~Iaf~nsyHG~t-lgals~~-~~s~y~~~~~p----~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEP 214 (433)
T KOG1401|consen 141 GKKHPEKKTKFIAFENSYHGRT-LGALSVT-GNSKYGLPFDP----IAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEP 214 (433)
T ss_pred cccCCccceeEEEEecCcCCcc-hhHHHhh-cccccCCCCCC----CCCceeecccCCHHHHHHHHHhCCCceEEEEEec
Confidence 23333 777765543321 1110000 00111111111 11111 2347899999998865 34566642
Q ss_pred -CCCCCCCC-----HHHHHHHHHHhCCEEEEecccccccccccc--cCCCCC-cccEEEeccccccc-CCCCeEEEeeCC
Q 009673 260 -SAYPRDFD-----YPRMRQIADAVGALLMMDMAHISGLVAASV--VADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKD 329 (529)
Q Consensus 260 -s~~p~~~d-----~~~i~~ia~~~g~~livD~ah~~Gli~~~~--~~~~~~-~aDiv~~S~hK~l~-GprgG~i~~~~~ 329 (529)
-..++..| +..|+++|+++|++||.|+.+. |+--.+. ...-+. ..||.+.. |.|+ |...|...+++
T Consensus 215 iqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~t-G~gR~g~~~a~e~~~~~PDI~t~a--K~L~gGlPigA~~v~~- 290 (433)
T KOG1401|consen 215 IQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQT-GLGRLGYGWAQEYFGVTPDITTVA--KPLGGGLPIGATGVRD- 290 (433)
T ss_pred ccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhh-CccccchHHHHHHhCcCCcceeeh--hhccCCceeEEEeehH-
Confidence 23333222 5678899999999999999853 3321111 011111 35887765 9884 45668888888
Q ss_pred CcchhHHHhhhccccc---CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673 330 PVLGVELESAINNAVF---PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~---p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~ 392 (529)
++.+.++...- .+..++ +.....+...+++++.++++ .+++.+..+.|++.|.+
T Consensus 291 -----kV~~~i~~~~~l~hg~Tf~g-npLacsa~~~~l~~l~~~e~---~k~vs~~~k~L~~~l~e 347 (433)
T KOG1401|consen 291 -----KVAEMISPGDHLYHGGTFSG-NPLACSAGIKVLDELKDPET---LKNVSKIGKELRKLLDE 347 (433)
T ss_pred -----HHHhhcCCCCccccCcccCC-ChhhhhHHHHHHHHHcCHHH---HHHHHHHHHHHHHHHHH
Confidence 67777765432 111222 22233333456777776554 44455555555555544
No 388
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.31 E-value=5.3e-05 Score=78.07 Aligned_cols=256 Identities=14% Similarity=0.076 Sum_probs=123.2
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
+-.|++.+++...+... ....+. . + .++ ...++ .+++.+.++-..+ -.....||++|+..++....
T Consensus 32 h~~p~i~~ai~~~~~~~-~~~~~~-~-~-~~~---~~~~l-a~~L~~~~p~~~~---~v~f~~sGseAve~Alkla~~~~ 100 (339)
T PF00202_consen 32 HNHPEIAEAIAEQANKL-NYVSFS-G-F-THP---EAAEL-AEKLAELFPGGLD---RVFFANSGSEAVEAALKLARQYH 100 (339)
T ss_dssp BT-HHHHHHHHHHHHHC-SSCSTT-T-S-EEH---HHHHH-HHHHHHHSSTTEE---EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCccccchhHHHHhhhc-cccccc-c-e-ecc---chhhh-hhhhhhccccccc---eeeeccCchHHHHHHHHHhhccc
Confidence 34688888888766432 211111 0 1 112 22222 3777888833222 23446899999998886443
Q ss_pred ----CCC-CEEEEcCCCCCccccc-----cccccccccccccceEEEEEcccCCC--CCCCCHHHHHHHhh---hcCCcE
Q 009673 190 ----KPH-DRIMGLDLPHGGHLSH-----GFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAI---LFRPKL 254 (529)
Q Consensus 190 ----~pG-D~Vl~~~~~~~g~~s~-----g~~~~~~~i~~~g~~~~~v~~~v~~~--~~~iD~d~le~~i~---~~~pkl 254 (529)
.+| .+|+...-.|-|.-.. +....++........+..++++-... ...-..+++++.+. ..+..+
T Consensus 101 ~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaa 180 (339)
T PF00202_consen 101 NKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAA 180 (339)
T ss_dssp HHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEE
T ss_pred ccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEE
Confidence 233 6888777554332100 00000000000001112223221000 00001122333332 223456
Q ss_pred EEEcCC-CC-CC----CCCHHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEecccccccC-CCCeEE
Q 009673 255 IIAGAS-AY-PR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG-PRGGMI 324 (529)
Q Consensus 255 Ii~~~s-~~-p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l~G-prgG~i 324 (529)
||+..- .. +. ..-+++|+++|++||+++|+|+.+. |+--.|..- .... ..|+++++ |.++| ...|.+
T Consensus 181 vivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~t-G~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG~p~sav 257 (339)
T PF00202_consen 181 VIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQT-GFGRTGKFFASEHYGVDPDIVTFG--KGLGGGLPISAV 257 (339)
T ss_dssp EEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTT-TTTTTSSSSGHHHHTSSSSEEEEE--GGGGTTSSEEEE
T ss_pred EEEeccccccCccccccchhhehcccccccccceecccccc-cccccCCccceecccccCcccccc--cchhhhhhcccc
Confidence 777632 11 11 2337999999999999999999854 432111100 0001 36999987 99954 444888
Q ss_pred EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (529)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~ 392 (529)
++++ ++.+.+.......+.++... .+++....|+.+.+++ +.+++.+..++|.+.|++
T Consensus 258 ~~~~------~i~~~~~~~~~~~T~~g~p~-~~aaa~~~l~~~~~~~---~~~~~~~~g~~l~~~L~~ 315 (339)
T PF00202_consen 258 LGSE------EIMEAFQPGSHGSTFGGNPL-SCAAALATLEILEEED---LLERVRELGERLREGLRE 315 (339)
T ss_dssp EEEH------HHHTTSCTTSSTCTTTT-HH-HHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHH
T ss_pred cccc------hhhccccccccccccccchH-hhhhhhhHHHhhccHH---HHHHHHHHHHHHHHHHHH
Confidence 8888 67776644333333444333 3333333566655433 345555556666666654
No 389
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.20 E-value=0.00055 Score=66.78 Aligned_cols=339 Identities=18% Similarity=0.182 Sum_probs=169.6
Q ss_pred cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (529)
Q Consensus 103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~ 182 (529)
+.|+-.+--.-..|+|.+|....+..- ....|| ..|++-+-++...+.+-+++ +...++|||+||.
T Consensus 51 DCInNVaHvghchp~VV~A~~kQmat~----~tN~RF-----lhd~lv~cA~~l~stlPeLs-----vc~F~NSGSEAND 116 (452)
T KOG1403|consen 51 DCINNVAHVGHCHPEVVRAGAKQMATI----STNNRF-----LHDELVQCARTLTSTLPELS-----VCFFVNSGSEAND 116 (452)
T ss_pred HHhhhhhhcccCCHHHHHHHHHHHhHh----cccchh-----hHHHHHHHHHHHhhcCCCce-----EEEEecCCchhhH
Confidence 456555555556788888876554311 122333 23555544444344444433 4566799999999
Q ss_pred HHHHhh--cCCCCEEEEcCCCCCcccccccccccccccccc-----ceEEEEEccc------C----C--CCCCCCHHHH
Q 009673 183 EVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-----IYFESMPYRL------D----E--STGLVDYDML 243 (529)
Q Consensus 183 ~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g-----~~~~~v~~~v------~----~--~~~~iD~d~l 243 (529)
+++.-. .....-|++++..|-||++.-.....-+...-+ -++.+-|.|= . + +-+..-.|.+
T Consensus 117 LALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~v 196 (452)
T KOG1403|consen 117 LALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPV 196 (452)
T ss_pred HHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHH
Confidence 888754 234445666777777776532110000000000 1112222210 0 0 0011123456
Q ss_pred HHHhhhc--CCcEE---EEc--CCCCCCCC----CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC----cccEE
Q 009673 244 EKTAILF--RPKLI---IAG--ASAYPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVV 308 (529)
Q Consensus 244 e~~i~~~--~pklI---i~~--~s~~p~~~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~aDiv 308 (529)
++++.+- +-..| |.. .|..+.++ -++++++-.+.+|-..|.|+.|. |+--.|.+.+.+. -.|||
T Consensus 197 k~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQv-GFGRvG~hyWafq~y~fiPDIV 275 (452)
T KOG1403|consen 197 KEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQV-GFGRVGSHYWAFQTYNFIPDIV 275 (452)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhh-cccccchhhhhhhhhccccchh
Confidence 6666532 11111 211 12222222 36777778888999999999874 3222233334343 25787
Q ss_pred Eecccccc-cCCCCeEEEeeCCCcchhHHHhhhcccc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 009673 309 TTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (529)
Q Consensus 309 ~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~ 385 (529)
+.. |.+ .|...+.++..+ ++.+.+...- +....|+.......+++ .++.+..+.+.+..+++ -.+
T Consensus 276 tmg--KpmGNGhPVa~Vattk------eIA~Af~atgv~YFNTyGGnPVsCAv~la-Vm~v~e~E~Lq~ha~~v---G~~ 343 (452)
T KOG1403|consen 276 TMG--KPMGNGHPVAAVATTK------EIAQAFHATGVEYFNTYGGNPVSCAVGLA-VMRVCEDENLQEHAQQV---GEK 343 (452)
T ss_pred eec--ccCCCCCeeeEEeccH------HHHHHhccccceehhccCCCchhHHHHHH-HHHHHhhhhHHHHHHHH---HHH
Confidence 755 877 566668888887 6777665421 22234554454444444 35554443333333333 333
Q ss_pred HHHHHHh--cCcEEecCCCCCceEE-EccCCCC---C-cH---HHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccC
Q 009673 386 LASRLVE--LGYKLVSGGSDNHLVL-VDLRPMG---I-DG---ARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSP 454 (529)
Q Consensus 386 l~~~L~~--~G~~v~~~gt~~~~~~-v~~~~~~---i-~~---~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~ 454 (529)
|...|++ ...+++.+-..-.++| +|+-... . +. ..+...| +.++|.++.- -| ....+.|--|
T Consensus 344 L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaD-GP------h~NilKiKPP 416 (452)
T KOG1403|consen 344 LEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSAD-GP------HRNILKIKPP 416 (452)
T ss_pred HHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecC-CC------CCceeecCCC
Confidence 4444433 2345554311122222 3442111 1 11 2244555 4578998643 12 2345666533
Q ss_pred CCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 455 AMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 455 ~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
++ +++++.++.+..+++++..
T Consensus 417 -mC---Fneena~e~v~~ld~iLT~ 437 (452)
T KOG1403|consen 417 -MC---FNEENADEFVLGLDEILTV 437 (452)
T ss_pred -cc---cChhhHHHHHHHHHHHHHH
Confidence 43 7799999999999998873
No 390
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.14 E-value=3.4e-05 Score=77.04 Aligned_cols=281 Identities=13% Similarity=0.086 Sum_probs=138.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCC----C--CEEEEcCCCCCccccccccccccccc
Q 009673 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKP----H--DRIMGLDLPHGGHLSHGFMTPKRRVS 218 (529)
Q Consensus 146 ~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~p----G--D~Vl~~~~~~~g~~s~g~~~~~~~i~ 218 (529)
..+||+.+ +++-++.|-...+= -.|.+.+|+ +.+.+++.||..+ + -.|+...|-|.... . ...
T Consensus 45 s~eL~~~I-r~LH~~VGNAvt~g-r~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~-----~---qt~ 114 (363)
T PF04864_consen 45 SPELERQI-RRLHRVVGNAVTDG-RYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYP-----E---QTD 114 (363)
T ss_dssp -HHHHHHH-HHHHHHH-SB--TT-SEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHH-----H---HCC
T ss_pred cHHHHHHH-HHHHHHhccccccC-cEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchH-----H---HHH
Confidence 45777654 56777776532111 135568887 8888888888422 2 26776666443221 1 111
Q ss_pred c-ccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE-EEcCCCCCCCCCHHHHHH-HHHHhCCEEEEecccccccccc
Q 009673 219 G-TSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI-IAGASAYPRDFDYPRMRQ-IADAVGALLMMDMAHISGLVAA 295 (529)
Q Consensus 219 ~-~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI-i~~~s~~p~~~d~~~i~~-ia~~~g~~livD~ah~~Gli~~ 295 (529)
+ .+..++. .=|...+. +- +.....| ++++||||.- .|.+ +.+.-+..+|.|-|+|--..
T Consensus 115 ~f~s~~y~w---~Gda~~~~-~~--------~~~~~~IElVTSPNNPDG----~lr~~V~~g~~~k~I~D~AYYWPhy-- 176 (363)
T PF04864_consen 115 FFDSRLYKW---AGDASNFK-NS--------DNPSPYIELVTSPNNPDG----QLREAVLNGSSGKVIHDLAYYWPHY-- 176 (363)
T ss_dssp CT-BTTEEE---EEECCCGT-T---------S-CCGEEEEEESS-TTT----------SSTTTEEEEEEE-TT-STTT--
T ss_pred hccccCccc---cccHHhhc-cC--------CCCCCeEEEEeCCCCCcc----cccchhcCCCCcceeeeeeeecccc--
Confidence 1 1111111 11212221 10 0012334 5778999851 1121 33455667899998664321
Q ss_pred cccCCCCC---cccEEEeccccc--ccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc--
Q 009673 296 SVVADPFK---YCDVVTTTTHKS--LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-- 368 (529)
Q Consensus 296 ~~~~~~~~---~aDiv~~S~hK~--l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-- 368 (529)
.|+. .-||+.+|++|. .+|.|.||.+++++ ++.+++...+.-...|...-.++-++- -|+.+.
T Consensus 177 ----TpI~~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~-----~Va~kM~~y~~lnTiGvS~dsQLRa~k-iLk~v~~~ 246 (363)
T PF04864_consen 177 ----TPITAPADHDIMLFTLSKLTGHAGSRFGWALVKDE-----EVAKKMTKYMELNTIGVSRDSQLRALK-ILKVVLDG 246 (363)
T ss_dssp ----S---S-B--SEEEEEHHHHCS-GGG-EEEEEES-H-----HHHHHHHHHHHHHCSS--HHHHHHHHH-HHHHHHHH
T ss_pred ----cccCCCCCCceEEEEEecccCccccccceeeecCH-----HHHHHHHHHHHHhcccCcHHHHHHHHH-HHHHHHhc
Confidence 2222 347999999996 36788899999986 677766544333334554444554432 122211
Q ss_pred --Cc----hHHHHH-HHHHHHHHHHHHHHHhc-CcEEec--CC----------CCCceEEEccCCCCCcHHHHHHhHhcC
Q 009673 369 --SP----EFKVYQ-NKVVSNCRALASRLVEL-GYKLVS--GG----------SDNHLVLVDLRPMGIDGARVEKILDMA 428 (529)
Q Consensus 369 --~~----~~~~~~-~~i~~~a~~l~~~L~~~-G~~v~~--~g----------t~~~~~~v~~~~~~i~~~~~~~~L~~~ 428 (529)
.. .+=++. +...++=+.|.+.+.+. -|.+.. ++ ...-+.|+.+..++ ..+++..|+++
T Consensus 247 ~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~ee--d~DC~~~l~~~ 324 (363)
T PF04864_consen 247 YGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREE--DEDCYAVLREA 324 (363)
T ss_dssp CCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCG--GSSHHHHHHCT
T ss_pred ccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcc--cccHHHHHHhC
Confidence 00 121222 22333344555665442 243321 10 11235788776432 25688999999
Q ss_pred CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 429 SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 429 GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
||..+.+...|. .+.++|||+. .+++|++.+.+.|..+
T Consensus 325 ~I~tr~G~~fga----~~ryVRlSml------~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 325 KIITRSGVLFGA----DSRYVRLSML------KRDDDFDQLLERLSKL 362 (363)
T ss_dssp TEEEEEGGGGTS-----TTEEEEESS------S-HHHHHHHHHHHHCC
T ss_pred CcccCCCCccCC----CCCeEEEecc------CCHHHHHHHHHHHHhh
Confidence 999876543332 4689999963 4589999999988653
No 391
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=97.77 E-value=0.0011 Score=64.18 Aligned_cols=329 Identities=16% Similarity=0.208 Sum_probs=173.2
Q ss_pred cceeEecCCCCCcHHHHHHHhhhhhccCCCCCC----CCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLP----GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (529)
Q Consensus 103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p----~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs 178 (529)
..+++-+++--+|..|+..++..+.|--.-|.. ..|. .++...++ .+...+.++++++.. +.+...-.+||
T Consensus 7 ~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRs---k~f~kii~-~tes~lreLlniPdn-~~vlf~QGGGt 81 (370)
T KOG2790|consen 7 RVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRS---KDFAKIIN-DTESLLRELLNIPDN-YKVLFLQGGGT 81 (370)
T ss_pred ceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccc---hhHHHHHH-HHHHHHHHHHcCCCc-eeEEEEeCCCc
Confidence 468888888889999999988888654333321 2332 23333333 344778889999864 33333335566
Q ss_pred HHHHHHHHhhc--CCC---CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCC--CCCCHHHHHHHhhhcC
Q 009673 179 PANFEVYTAIL--KPH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST--GLVDYDMLEKTAILFR 251 (529)
Q Consensus 179 ~A~~~~l~all--~pG---D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~--~~iD~d~le~~i~~~~ 251 (529)
....++...|. +.| |-|++-+... -. + +...-.|. ...+..+..+.+ ..+|.+.++-.. +
T Consensus 82 ~qFaAv~lNL~glK~g~~AdYiVTGsWS~------KA--~-~EAkk~~~-~~~V~~~~k~y~ygkvPd~~~w~~~~---d 148 (370)
T KOG2790|consen 82 GQFAAVPLNLIGLKHGRCADYVVTGSWSA------KA--A-EEAKKYGT-PNIVIPKLKSYTYGKVPDPSTWELNP---D 148 (370)
T ss_pred ccccccchhhhccccCCccceEEeccccH------HH--H-HHHHhhCC-ceEEeccccccccCcCCChhhcccCC---C
Confidence 44444444443 555 4555332110 00 0 00001111 122232322222 245555543211 2
Q ss_pred CcEEEEcCCC--CCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEe
Q 009673 252 PKLIIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFF 326 (529)
Q Consensus 252 pklIi~~~s~--~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~ 326 (529)
.+.+..+... -+..+| .+- +-.-+|+.+++|.+ +.++ ..|++ .-+++.....|.. ||-| -.++.
T Consensus 149 a~yvyyCaNETVHGVEf~--~~P-~~~~~~~vlVaDmS--Snfl-----SrpvDvsk~gvi~aGAQKN~-G~aG~Tvviv 217 (370)
T KOG2790|consen 149 ASYVYYCANETVHGVEFD--FIP-VNDPKGAVLVADMS--SNFL-----SRPVDVSKFGVIFAGAQKNV-GPAGVTVVIV 217 (370)
T ss_pred ccEEEEecCceeeceecC--CCC-CCCCCCceEEEecc--cchh-----cCCccchhcceEEecccccc-CccccEEEEE
Confidence 3455544221 111111 110 12346899999985 3333 22333 3458888899986 7777 66777
Q ss_pred eCCCcchhHHHhhhccc---cc--------CCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHh-c
Q 009673 327 KKDPVLGVELESAINNA---VF--------PGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVE-L 393 (529)
Q Consensus 327 ~~~~~~~~~l~~~i~~~---~~--------p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~-~ 393 (529)
++ ++..+.... ++ ..+..+|....|..+...|+.+...+ ..+..+.-.+.++.+.+.+.+ .
T Consensus 218 r~------dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~ 291 (370)
T KOG2790|consen 218 RK------DLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSN 291 (370)
T ss_pred eh------hhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 77 443332111 11 11234555556666666777766544 466777777888999999987 4
Q ss_pred CcEEec--CCCCCce-EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673 394 GYKLVS--GGSDNHL-VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 470 (529)
Q Consensus 394 G~~v~~--~gt~~~~-~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la 470 (529)
||-..+ +...+.+ +.+.+.+.+++.+++.+..+++=|. +-|+.+ -||||-|+- + -++-++.+.++
T Consensus 292 gfy~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~~~mv~-----LKGhRS---VGGiRASlY--N--Aisv~~~q~L~ 359 (370)
T KOG2790|consen 292 GFYRCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAKEHMVQ-----LKGHRS---VGGIRASLY--N--AISVEEVQKLA 359 (370)
T ss_pred CeEEcccchhhhhhcccceeecchHHHHHHHHHHHHhhhhc-----cccccc---cccchhhhh--c--cccHHHHHHHH
Confidence 765443 2112222 2233433334444444444443333 234432 478998862 2 25679999999
Q ss_pred HHHHHHHH
Q 009673 471 DFIHEGVE 478 (529)
Q Consensus 471 ~~i~~~~~ 478 (529)
+++++..+
T Consensus 360 ~~m~~F~k 367 (370)
T KOG2790|consen 360 AFMKEFQK 367 (370)
T ss_pred HHHHHHHH
Confidence 99987654
No 392
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.67 E-value=0.0016 Score=64.94 Aligned_cols=207 Identities=19% Similarity=0.270 Sum_probs=115.5
Q ss_pred HHHHHHHhhhcC----C-cEEEEcC--C----CCCCCCCHHHHHHHHHHhCCEEEEeccccccccccccc---CCCCC-c
Q 009673 240 YDMLEKTAILFR----P-KLIIAGA--S----AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV---ADPFK-Y 304 (529)
Q Consensus 240 ~d~le~~i~~~~----p-klIi~~~--s----~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~---~~~~~-~ 304 (529)
++++|++|..++ | ..||+.. + |.....-+..+++|+++||+.+|+|+.|.-|-.-+... ...++ -
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 567788887653 3 3455531 1 22223347899999999999999999986432211111 11222 3
Q ss_pred ccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673 305 CDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (529)
Q Consensus 305 aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~ 384 (529)
.|+|++| |-|. -||| +.++ +++..--...|..+.|-|.-..++. ..++++.+ +...+++...-+
T Consensus 335 pD~vTFS--KK~q--~gGf-fh~~------~frpn~pYrifNTWmGdP~k~lll~--~vv~~I~~---~~Ll~n~~~vG~ 398 (484)
T KOG1405|consen 335 PDVVTFS--KKFQ--TGGF-FHDE------EFRPNEPYRIFNTWMGDPSKNLLLE--EVVQEIKR---EDLLNNVAHVGK 398 (484)
T ss_pred ccceehh--hhhh--cCcc-ccCc------ccCCCchHHHhhhhcCChHHHHHHH--HHHHHHhH---HHHHHHHHHHHH
Confidence 7888876 6552 2453 2232 3433222223555667766544443 33455443 344555555566
Q ss_pred HHHHHHHhc-----C-cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCcc
Q 009673 385 ALASRLVEL-----G-YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTT 458 (529)
Q Consensus 385 ~l~~~L~~~-----G-~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt 458 (529)
.|...|.++ | +.-+ .|. ..+..||+.... -.+.+...++..||.+..+ +...||+- |.++
T Consensus 399 ~l~~gL~~Lq~~~p~~~~~~-RGr-GTF~a~d~ps~~-~Rdk~i~~~~~nGv~~GGC---------g~~siRfR-PsLv- 464 (484)
T KOG1405|consen 399 ALLKGLLELQAKYPGKINNL-RGR-GTFIAWDCPSGS-IRDKLILIARLNGVNLGGC---------GDKSIRFR-PSLV- 464 (484)
T ss_pred HHHHHHHHHHHhCchhhhcc-ccc-ceEEEEeCCChH-HHHHHHHHHHHcCceeccc---------ccceeeec-ccee-
Confidence 677666542 1 1111 122 235667886432 2356777788899988432 24567774 3344
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 009673 459 RGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 459 ~g~~~~d~~~la~~i~~~~~ 478 (529)
+.+...+.+.+.+++++.
T Consensus 465 --f~~~Ha~i~l~~~~k~l~ 482 (484)
T KOG1405|consen 465 --FRKHHADIFLDIFDKILA 482 (484)
T ss_pred --ehhhhHHHHHHHHHHHhc
Confidence 557777777777777653
No 393
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.29 E-value=0.0082 Score=64.35 Aligned_cols=279 Identities=14% Similarity=0.108 Sum_probs=143.1
Q ss_pred HHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC
Q 009673 154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (529)
Q Consensus 154 ~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~ 232 (529)
+..++++.|++-.+- .+ .--|+.|-.++.++. ..++.+.++..-.|+-.++-- ..+..+...+++
T Consensus 169 QTmi~dlTGL~~aNA--SL-LDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~------~TRa~~~~i~v~----- 234 (1001)
T KOG2040|consen 169 QTMITDLTGLPMANA--SL-LDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVV------KTRAKGFGIKVV----- 234 (1001)
T ss_pred HHhhhhccCCcccch--hh-hccchhHHHHHHHHHhhcccceEEecCCCCcchhhhh------hccccccceeEE-----
Confidence 355677788875431 11 234664444433333 456667776665554333211 001111111211
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC-CCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEe
Q 009673 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYP-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTT 310 (529)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~pklIi~~~s~~p-~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~ 310 (529)
..|+++..... + +...+++.+|..- .+.|+.++.+.+++.|..+++- ..+.+.-....|-+ ++||+++
T Consensus 235 ----~~~~~~~~~s~-~-~v~gvlvQYP~t~G~i~d~~el~~~a~~~~s~vv~a----tDLLaLtiLrpPgefGaDIavG 304 (1001)
T KOG2040|consen 235 ----VSDIKEADYSS-K-DVSGVLVQYPDTEGSVLDFDELVELAHANGSLVVMA----TDLLALTILRPPGEFGADIAVG 304 (1001)
T ss_pred ----ecCHHHhhccc-c-ceeEEEEEcCCCCCcccCHHHHHHHhhccCceEEEe----ehhhHHHccCChhhcCceeeec
Confidence 12333322111 1 3456777777644 4889999999999999887652 22332222334444 8999999
Q ss_pred ccccc-----ccCCCCeEEEeeCCC-------------c----chhH-----HHhhhcccccCCCCCCChHHHHHHHHHH
Q 009673 311 TTHKS-----LRGPRGGMIFFKKDP-------------V----LGVE-----LESAINNAVFPGLQGGPHNHTIGGLAVC 363 (529)
Q Consensus 311 S~hK~-----l~GprgG~i~~~~~~-------------~----~~~~-----l~~~i~~~~~p~~~g~p~~~~iaala~a 363 (529)
|.... ++||..||..+++.. + ..+. -.+.|++-.-.....+ ....+|-+++.
T Consensus 305 SsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICT-AQALLANmaAm 383 (1001)
T KOG2040|consen 305 SSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICT-AQALLANMAAM 383 (1001)
T ss_pred cccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhH-HHHHHHHHHHH
Confidence 99874 467877877766521 0 0000 0111221110000001 00011111111
Q ss_pred HH-HhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCC
Q 009673 364 LK-HAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKS 442 (529)
Q Consensus 364 l~-~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~ 442 (529)
+. .....++++..+++....-.|...|++.|.+++.. .++-.+.++-.. +.+++..+-.+..|-...
T Consensus 384 yaiYHGp~gL~~IArrvh~~T~~l~~~l~~aghel~~k---~fFDTLkI~~~~-s~~~~l~rA~~~~iNlr~-------- 451 (1001)
T KOG2040|consen 384 YAIYHGPHGLKEIARRVHNLTLILAEGLKNAGHELQHK---PFFDTLKIRCGC-SAEEVLDRAAKRQINLRL-------- 451 (1001)
T ss_pred HhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcchhhccc---cccceEEEEecC-cHHHHHHHHHhhcCceEE--------
Confidence 11 22345678888999999999999999888777643 333333333222 455554444444555432
Q ss_pred CCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673 443 ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 474 (529)
Q Consensus 443 ~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~ 474 (529)
+..+-|-+++..- .+++|++.+...+.
T Consensus 452 -~ed~tigvslDET----v~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 452 -VEDGTIGVSLDET----VTEKDVDDLLWVFN 478 (1001)
T ss_pred -eecCceEEeeccc----ccHHHHHHHHHHHc
Confidence 1234455555433 45899999988775
No 394
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.14 E-value=0.0011 Score=60.06 Aligned_cols=56 Identities=13% Similarity=0.036 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHcC--CCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCC
Q 009673 146 IDELETLCQKRALAAFN--LDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHG 203 (529)
Q Consensus 146 ~d~lE~~a~~~la~~~g--~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ 203 (529)
..++.+.+.+++.+.+| ++.+. .+|.+++|+ +|+..++.++++|||.|++++|.|+
T Consensus 94 ~~~lR~AiA~~l~~~~g~~v~~~p--d~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 94 LANFRKAIANFMAEARGGRVKFDA--DMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred cHHHHHHHHHHHHHHhCCCCccch--hheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 34666677799999988 33211 256678887 9999999999999999999999764
No 395
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=95.94 E-value=0.15 Score=49.33 Aligned_cols=112 Identities=21% Similarity=0.256 Sum_probs=73.9
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCC----CCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccC-----CCCCcc
Q 009673 236 GLVDYDMLEKTAILFRPKLIIAGASA----YPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA-----DPFKYC 305 (529)
Q Consensus 236 ~~iD~d~le~~i~~~~pklIi~~~s~----~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~-----~~~~~a 305 (529)
-.-|++.+++.+++..+..|++-.+. -|+ ...+++|+.||..|+++-++..|+ |+-...... ......
T Consensus 139 l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnay--glqsee~i~~iaa~~~~gri 216 (432)
T KOG3843|consen 139 LITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAY--GLQSEECIHKIAAAAECGRI 216 (432)
T ss_pred HHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhcccc--ccchHHHHHHHHHHhhhccH
Confidence 35589999999988778866654332 233 567999999999999999999874 322111000 011247
Q ss_pred cEEEecccccccCCCCeEEEe-eCCCcchhHHHhhhcccccCCC-CCCChHH
Q 009673 306 DVVTTTTHKSLRGPRGGMIFF-KKDPVLGVELESAINNAVFPGL-QGGPHNH 355 (529)
Q Consensus 306 Div~~S~hK~l~GprgG~i~~-~~~~~~~~~l~~~i~~~~~p~~-~g~p~~~ 355 (529)
|.++-|+.|.|.-|-||.|+. -++ .+++.|.+. +||- ...|...
T Consensus 217 da~vqsldknf~vpvggaiia~fk~-----n~iq~iak~-ypgrasa~ps~d 262 (432)
T KOG3843|consen 217 DAFVQSLDKNFMVPVGGAIIAAFKD-----NFIQEIAKM-YPGRASASPSLD 262 (432)
T ss_pred HHHHHHhhhcceeecchhHhhHhHH-----HHHHHHHHh-CCCccccCccHH
Confidence 889999999999999976654 222 566666554 5654 3344443
No 396
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=67.55 E-value=15 Score=34.22 Aligned_cols=72 Identities=17% Similarity=0.154 Sum_probs=47.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccc
Q 009673 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHK 314 (529)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK 314 (529)
.+++++++++++. ...+|.+..+.-++..+++++.+-.|+++.+++.|.+-....+.. .. .++|++.++++=
T Consensus 51 TPT~~ev~~l~~a-GadIIAlDaT~R~Rp~~l~~li~~i~~~~~l~MADist~ee~~~A--~~---~G~D~I~TTLsG 122 (192)
T PF04131_consen 51 TPTLKEVDALAEA-GADIIALDATDRPRPETLEELIREIKEKYQLVMADISTLEEAINA--AE---LGFDIIGTTLSG 122 (192)
T ss_dssp S-SHHHHHHHHHC-T-SEEEEE-SSSS-SS-HHHHHHHHHHCTSEEEEE-SSHHHHHHH--HH---TT-SEEE-TTTT
T ss_pred CCCHHHHHHHHHc-CCCEEEEecCCCCCCcCHHHHHHHHHHhCcEEeeecCCHHHHHHH--HH---cCCCEEEccccc
Confidence 4678999998887 889999998887777889999988888889999998633221110 00 168999988665
No 397
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=61.48 E-value=19 Score=34.06 Aligned_cols=72 Identities=19% Similarity=0.129 Sum_probs=51.0
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCC-CHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccc
Q 009673 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDF-DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHK 314 (529)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~-d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK 314 (529)
...++++++++.. ...+|.+..+.-++.. +++++.+-.+..|.+++.|.+..-..... +. .++||+-+++|=
T Consensus 85 TptlkeVd~L~~~-Ga~IIA~DaT~R~RP~~~~~~~i~~~k~~~~l~MAD~St~ee~l~a--~~---~G~D~IGTTLsG 157 (229)
T COG3010 85 TPTLKEVDALAEA-GADIIAFDATDRPRPDGDLEELIARIKYPGQLAMADCSTFEEGLNA--HK---LGFDIIGTTLSG 157 (229)
T ss_pred cccHHHHHHHHHC-CCcEEEeecccCCCCcchHHHHHHHhhcCCcEEEeccCCHHHHHHH--HH---cCCcEEeccccc
Confidence 3456888888876 7888888887777755 89999988888999999998632111100 00 168898887664
No 398
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=57.61 E-value=25 Score=36.50 Aligned_cols=57 Identities=19% Similarity=0.384 Sum_probs=43.4
Q ss_pred CCC-CCHHHHHHHhhhc----CCcEEEE--cCCCCCC----CCCHHHHHHHHHHhCCEEEEecccccc
Q 009673 235 TGL-VDYDMLEKTAILF----RPKLIIA--GASAYPR----DFDYPRMRQIADAVGALLMMDMAHISG 291 (529)
Q Consensus 235 ~~~-iD~d~le~~i~~~----~pklIi~--~~s~~p~----~~d~~~i~~ia~~~g~~livD~ah~~G 291 (529)
++. .++++++.+++.. +++++++ |.+.||+ ..|+..|..+-+.++++|++|..|..|
T Consensus 232 ~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 232 RGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 565 6888887766532 3578777 4566664 368999998888899999999999876
No 399
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=56.47 E-value=28 Score=34.17 Aligned_cols=58 Identities=14% Similarity=0.276 Sum_probs=42.1
Q ss_pred CC-CCCHHHHHHHhhhc----CCcEEEEc--CCCCCC----CCCHHHHHHHHHHhCCEEEEeccccccc
Q 009673 235 TG-LVDYDMLEKTAILF----RPKLIIAG--ASAYPR----DFDYPRMRQIADAVGALLMMDMAHISGL 292 (529)
Q Consensus 235 ~~-~iD~d~le~~i~~~----~pklIi~~--~s~~p~----~~d~~~i~~ia~~~g~~livD~ah~~Gl 292 (529)
++ ..++++++.+++.. +++++++. .+.|+. ..|+..|..+.+..+.+|++|.+|..|.
T Consensus 129 ~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 129 RGLMATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 45 67888887666532 35777763 455554 5688888888887999999999988663
No 400
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=55.39 E-value=1.6e+02 Score=31.74 Aligned_cols=91 Identities=19% Similarity=0.177 Sum_probs=52.0
Q ss_pred CCCCHHHHHHHhhhc----CCcEEEEc---CCCCCCCCCHHHHHHHHHHhC-CEEEEecccccccccccccCCCC-C---
Q 009673 236 GLVDYDMLEKTAILF----RPKLIIAG---ASAYPRDFDYPRMRQIADAVG-ALLMMDMAHISGLVAASVVADPF-K--- 303 (529)
Q Consensus 236 ~~iD~d~le~~i~~~----~pklIi~~---~s~~p~~~d~~~i~~ia~~~g-~~livD~ah~~Gli~~~~~~~~~-~--- 303 (529)
+.+|.-.+++.|.+. |.-+|++. .+-.+....+-+|.+||++|+ .|++.-+-..+.++.. .|+.. .
T Consensus 272 griDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eahakfWLHasGhaiAALt~a--epnnil~HV~ 349 (838)
T KOG0630|consen 272 GRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHAKFWLHASGHAIAALTCA--EPNNILGHVE 349 (838)
T ss_pred ccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhhheeEeeccchhhheeec--CcccchhHHH
Confidence 589999999888753 33444433 444555667889999999997 8888764222223322 12221 1
Q ss_pred -cccEEEecccccccCCCCeEEEeeC
Q 009673 304 -YCDVVTTTTHKSLRGPRGGMIFFKK 328 (529)
Q Consensus 304 -~aDiv~~S~hK~l~GprgG~i~~~~ 328 (529)
..|.++-..--||+-|..-++...+
T Consensus 350 eqldSMal~ialWLGiPSaPiV~LHR 375 (838)
T KOG0630|consen 350 EQLDSMALNIALWLGIPSAPIVLLHR 375 (838)
T ss_pred HHHhhccchhHHHhCCCCCceEEeec
Confidence 2344444444566445444444443
No 401
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=51.56 E-value=31 Score=29.11 Aligned_cols=49 Identities=14% Similarity=0.065 Sum_probs=39.5
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEe
Q 009673 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 285 (529)
Q Consensus 236 ~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD 285 (529)
..++++++++.+.+ +|..|+++...++...-.++..+++++.++-+++-
T Consensus 47 Hkl~~eEle~~lee-~~E~ivvGTG~~G~l~l~~ea~e~~r~k~~~vi~~ 95 (121)
T COG1504 47 HKLALEELEELLEE-GPEVIVVGTGQSGMLELSEEAREFFRKKGCEVIEL 95 (121)
T ss_pred cccCHHHHHHHHhc-CCcEEEEecCceeEEEeCHHHHHHHHhcCCeEEEe
Confidence 47999999999987 99999998777776544567788999988777653
No 402
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=51.32 E-value=42 Score=28.37 Aligned_cols=43 Identities=9% Similarity=-0.143 Sum_probs=32.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhC
Q 009673 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (529)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g 279 (529)
....+++.+.+.+.+|++|.++.+.........++.+.+++.+
T Consensus 36 ~~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~ 78 (119)
T cd02067 36 DVPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAG 78 (119)
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcC
Confidence 3567888888877799999998765555666778877777763
No 403
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=51.17 E-value=37 Score=33.53 Aligned_cols=57 Identities=12% Similarity=0.234 Sum_probs=41.9
Q ss_pred CCCC-CHHHHHHHhhhc----CCcEEEEc--CCCC-CC---CCCHHHHHHHHHHhCCEEEEecccccc
Q 009673 235 TGLV-DYDMLEKTAILF----RPKLIIAG--ASAY-PR---DFDYPRMRQIADAVGALLMMDMAHISG 291 (529)
Q Consensus 235 ~~~i-D~d~le~~i~~~----~pklIi~~--~s~~-p~---~~d~~~i~~ia~~~g~~livD~ah~~G 291 (529)
++.- ++++++.+++.. +.+++++. .+.| |. ..|+..|..+.+.++.+|+.|..|..|
T Consensus 139 ~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 139 RGMGNTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 4544 888887776543 34666653 5566 54 678999999988889999999999866
No 404
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=49.66 E-value=36 Score=35.20 Aligned_cols=58 Identities=21% Similarity=0.338 Sum_probs=41.8
Q ss_pred CCCC-CHHHHHHHhhhc----CCcEEEEcC------CCCCC-CCCHHHHHHHHHHhCCEEEEeccccccc
Q 009673 235 TGLV-DYDMLEKTAILF----RPKLIIAGA------SAYPR-DFDYPRMRQIADAVGALLMMDMAHISGL 292 (529)
Q Consensus 235 ~~~i-D~d~le~~i~~~----~pklIi~~~------s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gl 292 (529)
++.- +++++..+++.. +.+++++.. +.||. ..|+..|..+-+..++++|+|.+|+.|.
T Consensus 215 ~G~~~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 215 RGMAATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCc
Confidence 4444 888876665432 457777642 24665 6799999999777799999999998874
No 405
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=47.70 E-value=58 Score=27.92 Aligned_cols=49 Identities=12% Similarity=0.009 Sum_probs=37.9
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEec
Q 009673 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (529)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ 286 (529)
.++.++++.++.. +|.+|+++.-.......-.++.+..+++|+-+.+-.
T Consensus 45 ~l~~~~l~~ll~~-~peivliGTG~~~~~~~~~~~~~~l~~~Gi~ve~m~ 93 (117)
T cd05126 45 GLQPEELEELLEE-GVEVIVIGTGQSGALKVPPETVEKLEKRGVEVLVLP 93 (117)
T ss_pred cCCHHHHHHHHhc-CCCEEEEcCCCCccccCCHHHHHHHHhcCCEEEEcC
Confidence 5889999999987 899999986655543444667778888999887743
No 406
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=46.81 E-value=58 Score=28.74 Aligned_cols=51 Identities=14% Similarity=0.128 Sum_probs=37.6
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHh
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV 278 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~ 278 (529)
+++++.+.. .+.++++.+.+.+++|++|.++..+......++++.+..++.
T Consensus 31 G~eVi~LG~-----~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 31 GFEVINLGV-----MTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEA 81 (137)
T ss_pred CCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhc
Confidence 357777654 356788888888889999999766665556677777777765
No 407
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=46.03 E-value=39 Score=28.45 Aligned_cols=52 Identities=15% Similarity=0.122 Sum_probs=36.6
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHh--CCEEEEecccc
Q 009673 238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV--GALLMMDMAHI 289 (529)
Q Consensus 238 iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~--g~~livD~ah~ 289 (529)
.+.+++.+.+.+.+|++|.++.+..+......++.+..++. ++.+++=+.|.
T Consensus 38 ~~~~~l~~~~~~~~pd~V~iS~~~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 38 VPPEELVEALRAERPDVVGISVSMTPNLPEAKRLARAIKERNPNIPIVVGGPHA 91 (121)
T ss_dssp B-HHHHHHHHHHTTCSEEEEEESSSTHHHHHHHHHHHHHTTCTTSEEEEEESSS
T ss_pred CCHHHHHHHHhcCCCcEEEEEccCcCcHHHHHHHHHHHHhcCCCCEEEEECCch
Confidence 45588988888889999988754444444556667666666 78888877653
No 408
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=45.65 E-value=1.3e+02 Score=25.24 Aligned_cols=50 Identities=20% Similarity=0.139 Sum_probs=37.0
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEec
Q 009673 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (529)
Q Consensus 236 ~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ 286 (529)
..++.+++...+...+|.+|+++.-.... .+-+++.+..+++|+-+-+-.
T Consensus 37 ~~l~~~~l~~~~~~~~peiliiGTG~~~~-~~~~~~~~~l~~~gI~vE~m~ 86 (109)
T cd00248 37 SDLDPEALLPLLAEDRPDILLIGTGAEIA-FLPRALRAALRAAGIGVEVMS 86 (109)
T ss_pred ccCCHHHHHHHHhhCCCCEEEEcCCCCCC-cCCHHHHHHHHHcCCeEEEeC
Confidence 36899999988876239999998665553 344678888889998776543
No 409
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=44.59 E-value=52 Score=28.77 Aligned_cols=53 Identities=15% Similarity=0.134 Sum_probs=38.6
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCC
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGA 280 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~ 280 (529)
+|+++..+++ ..++.+-+.+.++++.+|.++.-+..+...++++.+..++.|+
T Consensus 27 GfeVidLG~~-----v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl 79 (128)
T cd02072 27 GFNVVNLGVL-----SPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGL 79 (128)
T ss_pred CCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCC
Confidence 4677776654 5678887777777999988865445556678888888888764
No 410
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=44.56 E-value=58 Score=33.02 Aligned_cols=53 Identities=17% Similarity=0.217 Sum_probs=37.1
Q ss_pred CCCCCHHHHHHHhhhc-----CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecc
Q 009673 235 TGLVDYDMLEKTAILF-----RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMA 287 (529)
Q Consensus 235 ~~~iD~d~le~~i~~~-----~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~a 287 (529)
.-.++.++++..++.. +-.+|+++.|--++ ...+.++.++|++.|+.+++|.+
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECC
Confidence 3467777766655432 23567776555444 34588999999999999999965
No 411
>KOG4759 consensus Ribosome recycling factor [Translation, ribosomal structure and biogenesis]
Probab=43.89 E-value=1.9e+02 Score=28.42 Aligned_cols=86 Identities=14% Similarity=0.223 Sum_probs=48.0
Q ss_pred HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcc---cch-hh
Q 009673 419 ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQG---SKL-QD 494 (529)
Q Consensus 419 ~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~~~~~~~~---~~~-~~ 494 (529)
..+.+..++.|.-++++ .....||++.|.+|+ |--+.++..+++....+.+--..... +++ +.
T Consensus 156 kai~kAI~~S~lnltP~--------~dg~~l~vsiP~~T~-----E~Re~laK~~~~~~ee~K~slr~ir~~~~kk~~k~ 222 (263)
T KOG4759|consen 156 KAILKAIEASGLNLTPN--------LDGTVLRVSIPPVTK-----ESREKLAKVLKRYFEEYKQSLRKIRTKSIKKSKKN 222 (263)
T ss_pred HHHHHHHHhCCCCCCcC--------CCCcEEEecCCCcCh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45566666666555332 234579999998774 77777777777666555432111101 111 11
Q ss_pred hhcccCCCCccchHHHHHHHHHHHHHHhhC
Q 009673 495 FMNFVTSPNFSLMNNVADLRGRVEALTTQF 524 (529)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 524 (529)
+.+ +. + +++..+.+++.+++..|
T Consensus 223 ~~~-~~--~----D~vkkae~~l~~l~k~~ 245 (263)
T KOG4759|consen 223 KKS-LS--E----DEVKKAEAELQKLAKDA 245 (263)
T ss_pred ccc-CC--h----hHHHHHHHHHHHHHHHH
Confidence 111 21 1 36788888888887654
No 412
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=43.78 E-value=66 Score=33.70 Aligned_cols=69 Identities=13% Similarity=0.051 Sum_probs=40.8
Q ss_pred cccccceEEEEEcccCCCCCCCCHHHHHHHhhh--cCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEe
Q 009673 217 VSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 285 (529)
Q Consensus 217 i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~--~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD 285 (529)
.+.....-+.+.++..+.....+.+.|.+.+.. -..++++++--+-+...+.+.+.++|+++|+++++|
T Consensus 107 ~Rv~s~nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~~~~~vVLSDY~KG~L~~~q~~I~~ar~~~~pVLvD 177 (467)
T COG2870 107 LRVLSRNQQLLRLDFEEKFPIEDENKLLEKIKNALKSFDALVLSDYAKGVLTNVQKMIDLAREAGIPVLVD 177 (467)
T ss_pred eeeecccceEEEecccccCcchhHHHHHHHHHHHhhcCCEEEEeccccccchhHHHHHHHHHHcCCcEEEC
Confidence 344444445666544311112334444444433 135778885333344667999999999999999999
No 413
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=39.79 E-value=63 Score=28.45 Aligned_cols=54 Identities=19% Similarity=0.167 Sum_probs=38.8
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGA 280 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~ 280 (529)
.+|+++..+++ ..+|++-+.+.++++.+|.+++-+..+...++++.+.+++.|+
T Consensus 28 ~GfeVi~LG~~-----v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 28 AGFNVVNLGVL-----SPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred CCCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCC
Confidence 34688776653 5678887777777999988865444445568888888888764
No 414
>COG4566 TtrR Response regulator [Signal transduction mechanisms]
Probab=39.00 E-value=1.8e+02 Score=27.38 Aligned_cols=50 Identities=26% Similarity=0.311 Sum_probs=34.2
Q ss_pred HHHHHHHHHhcCcEEec-----------CCCCCceEEEccCCCCCcHHHHHHhHhcCCeEE
Q 009673 383 CRALASRLVELGYKLVS-----------GGSDNHLVLVDLRPMGIDGARVEKILDMASITL 432 (529)
Q Consensus 383 a~~l~~~L~~~G~~v~~-----------~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v 432 (529)
++.+..-|...||.+.. +.....-+++|++-.|++|.++...|.+.|+..
T Consensus 17 r~al~~Ll~s~G~~v~~~~s~~~fL~~~~~~~pGclllDvrMPg~sGlelq~~L~~~~~~~ 77 (202)
T COG4566 17 RDALAFLLESAGFQVKCFASAEEFLAAAPLDRPGCLLLDVRMPGMSGLELQDRLAERGIRL 77 (202)
T ss_pred HHHHHHHHHhCCceeeeecCHHHHHhhccCCCCCeEEEecCCCCCchHHHHHHHHhcCCCC
Confidence 44555566667776542 011223467799988999999999999988754
No 415
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=37.67 E-value=68 Score=34.89 Aligned_cols=54 Identities=17% Similarity=0.177 Sum_probs=39.4
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHh--CCEEEEeccccc
Q 009673 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV--GALLMMDMAHIS 290 (529)
Q Consensus 236 ~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~--g~~livD~ah~~ 290 (529)
..++.+++.+.+.+++|++|.++.. .+......++++++++. ++.+++=+.|..
T Consensus 48 ~~~~~~~~~~~l~~~~pdvVgis~~-t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 48 GPLTDEKLVERLRAHCPDLVLITAI-TPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred cCCCHHHHHHHHHhcCcCEEEEecC-cccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 4567788888888889999988632 23333456777888887 899998877654
No 416
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=36.99 E-value=83 Score=26.92 Aligned_cols=50 Identities=14% Similarity=0.066 Sum_probs=34.5
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHh
Q 009673 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV 278 (529)
Q Consensus 224 ~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~ 278 (529)
|+++.... ...++++.+.+.+.+|++|+++.........++++.+..++.
T Consensus 28 ~~vi~lG~-----~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~ 77 (122)
T cd02071 28 FEVIYTGL-----RQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLREL 77 (122)
T ss_pred CEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhc
Confidence 56666442 356778877777779999999866554455567777777766
No 417
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=36.91 E-value=83 Score=29.55 Aligned_cols=60 Identities=12% Similarity=0.087 Sum_probs=45.1
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhC----CEEEEec
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG----ALLMMDM 286 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g----~~livD~ 286 (529)
.+|+++.+.. .+..+++.+.+.+.+|++|.++.+.......++++.+..++.+ +.+++=+
T Consensus 111 ~G~~vi~LG~-----~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG 174 (197)
T TIGR02370 111 NGFDVIDLGR-----DVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGG 174 (197)
T ss_pred CCcEEEECCC-----CCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEC
Confidence 3468877664 3678899888888899999998777766667888888888774 5566544
No 418
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=35.65 E-value=85 Score=29.52 Aligned_cols=60 Identities=12% Similarity=0.021 Sum_probs=42.8
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhC----CEEEEec
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG----ALLMMDM 286 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g----~~livD~ 286 (529)
.+++++.++. .+..+++.+.+.+.+|++|.++.+.......++++.+..++.+ +.+++=+
T Consensus 109 ~G~~vi~lG~-----~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG 172 (201)
T cd02070 109 NGFEVIDLGR-----DVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGG 172 (201)
T ss_pred CCCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEEC
Confidence 3467766553 3678899888888899999998766666666778777777663 4566544
No 419
>TIGR00496 frr ribosome recycling factor. This model finds only eubacterial proteins. Mitochondrial and/or chloroplast forms might be expected but are not currently known. This protein was previously called ribosome releasing factor. By releasing ribosomes from mRNA at the end of protein biosynthesis, it prevents inappropriate translation from 3-prime regions of the mRNA and frees the ribosome for new rounds of translation. EGAD|53116|YHR038W is part of the frr superfamily.
Probab=34.80 E-value=3.4e+02 Score=25.05 Aligned_cols=49 Identities=20% Similarity=0.281 Sum_probs=31.9
Q ss_pred HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 419 ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 419 ~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
..+.+.+...++-+++ .. ....|||.+|.+| +|--++++..++.....+
T Consensus 67 ~~I~kAI~~s~lglnP----~~----dg~~Iri~iP~lT-----~E~RkelvK~~k~~~E~a 115 (176)
T TIGR00496 67 NAIEKAIQRSDLGLNP----NN----DGSVIRVNFPPLT-----EERRKELVKHAKKIAEQA 115 (176)
T ss_pred HHHHHHHHHCCCCCCc----cc----CCCEEEecCCCCC-----HHHHHHHHHHHHHHHHHH
Confidence 5677888777775543 21 2357999999876 466666776666655443
No 420
>TIGR03586 PseI pseudaminic acid synthase.
Probab=32.43 E-value=1.2e+02 Score=31.20 Aligned_cols=56 Identities=20% Similarity=0.416 Sum_probs=39.8
Q ss_pred CCCCCHHHHHHHhhhc----CCcEEEE-cCCCCCC---CCCHHHHHHHHHHhCCEE-EEeccccccc
Q 009673 235 TGLVDYDMLEKTAILF----RPKLIIA-GASAYPR---DFDYPRMRQIADAVGALL-MMDMAHISGL 292 (529)
Q Consensus 235 ~~~iD~d~le~~i~~~----~pklIi~-~~s~~p~---~~d~~~i~~ia~~~g~~l-ivD~ah~~Gl 292 (529)
+|.-++++++.++.-. .++++++ +.++||+ ..++..|..+.++++++| ++| |..|.
T Consensus 141 tG~~t~~Ei~~Av~~i~~~g~~~i~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G~ 205 (327)
T TIGR03586 141 TGIATLEEIQEAVEACREAGCKDLVLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGLSD--HTLGI 205 (327)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCcEEEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEeeC--CCCch
Confidence 4556777777666432 3466554 4677876 568999999999999999 888 77663
No 421
>cd00520 RRF Ribosome recycling factor (RRF). Ribosome recycling factor dissociates the posttermination complex, composed of the ribosome, deacylated tRNA, and mRNA, after termination of translation. Thus ribosomes are "recycled" and ready for another round of protein synthesis. RRF is believed to bind the ribosome at the A-site in a manner that mimics tRNA, but the specific mechanisms remain unclear. RRF is essential for bacterial growth. It is not necessary for cell growth in archaea or eukaryotes, but is found in mitochondria or chloroplasts of some eukaryotic species.
Probab=32.26 E-value=3.8e+02 Score=24.80 Aligned_cols=49 Identities=22% Similarity=0.269 Sum_probs=31.5
Q ss_pred HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 419 ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 419 ~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
..+.+.+...++-++ |-. ....|||.+|.+| +|--++++..++.....+
T Consensus 72 ~~I~kAI~~s~l~l~----P~~----dg~~iri~iP~lT-----~E~R~~lvK~~k~~~E~~ 120 (179)
T cd00520 72 KAIEKAILNSDLGLN----PNN----DGAVIRVNLPPLT-----EERRKELVKDAKKIAEEA 120 (179)
T ss_pred HHHHHHHHHCCCCCC----cCc----CCCEEEecCCCCC-----HHHHHHHHHHHHHHHHHH
Confidence 457777777776553 211 2347999999866 566667777776665444
No 422
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=32.24 E-value=1.3e+02 Score=28.71 Aligned_cols=48 Identities=8% Similarity=0.057 Sum_probs=30.7
Q ss_pred CCCHHHHHHHhh----hcCCcEEEEcCCCC---C--CCCC-------HHHHHHHHHHhCCEEEE
Q 009673 237 LVDYDMLEKTAI----LFRPKLIIAGASAY---P--RDFD-------YPRMRQIADAVGALLMM 284 (529)
Q Consensus 237 ~iD~d~le~~i~----~~~pklIi~~~s~~---p--~~~d-------~~~i~~ia~~~g~~liv 284 (529)
.+++++|++.+. .+++++|++.+-.. + .... +..|.++|+++|+.+++
T Consensus 105 ~~~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 105 SLTVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 467777766554 34789999874221 1 1111 45677889999998776
No 423
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=31.71 E-value=1e+02 Score=29.40 Aligned_cols=59 Identities=12% Similarity=0.125 Sum_probs=42.6
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhC--CEEEEe
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG--ALLMMD 285 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g--~~livD 285 (529)
.+++++.++. .+.++++.+.+.+.+|++|.++.....+...++++.+..++.+ +.+++=
T Consensus 115 ~G~~Vi~LG~-----~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~~~~i~vG 175 (213)
T cd02069 115 NGYEVIDLGV-----MVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGIKIPLLIG 175 (213)
T ss_pred CCCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCCCCeEEEE
Confidence 3468877664 3678999888888899999998776666667777777777664 444443
No 424
>smart00642 Aamy Alpha-amylase domain.
Probab=30.63 E-value=39 Score=30.88 Aligned_cols=27 Identities=19% Similarity=0.331 Sum_probs=23.0
Q ss_pred CCCCCCCHHHHHHHHHHhCCEEEEecc
Q 009673 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (529)
Q Consensus 261 ~~p~~~d~~~i~~ia~~~g~~livD~a 287 (529)
.+++..+++++++-|+++|+.||.|..
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 445567899999999999999999974
No 425
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=29.54 E-value=82 Score=31.25 Aligned_cols=57 Identities=16% Similarity=0.308 Sum_probs=38.6
Q ss_pred CCCC-CHHHHHHHhhhc----CCcEEEEc-----CCCCCC-CCCHHHHHHHHHHhCCEEEEecccccc
Q 009673 235 TGLV-DYDMLEKTAILF----RPKLIIAG-----ASAYPR-DFDYPRMRQIADAVGALLMMDMAHISG 291 (529)
Q Consensus 235 ~~~i-D~d~le~~i~~~----~pklIi~~-----~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~G 291 (529)
++.- +++++..+++.. +++++++- .++|+. ..|+..|..+-+..+.+|++|..|..|
T Consensus 141 ~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 141 RGMSATLEEWLYAAEYIMSEGNENVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCeEEEEECCCCCCCCCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 4433 777776665432 45666553 345664 457778877777779999999998866
No 426
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=29.16 E-value=1.7e+02 Score=24.57 Aligned_cols=49 Identities=18% Similarity=0.087 Sum_probs=36.9
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEec
Q 009673 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (529)
Q Consensus 236 ~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ 286 (529)
..++.++++..+.. +|.+|+++.-.+.... -.++.+.++++|+-+-+-.
T Consensus 38 ~~l~~e~l~~l~~~-~peiliiGTG~~~~~~-~~~~~~~l~~~gi~vE~m~ 86 (109)
T cd05560 38 EDLTAAHFEALLAL-QPEVILLGTGERQRFP-PPALLAPLLARGIGVEVMD 86 (109)
T ss_pred ccCCHHHHHHHHhc-CCCEEEEecCCCCCcC-CHHHHHHHHHcCCeEEEEC
Confidence 36889999988877 7999999865554433 4777888888998776543
No 427
>PRK00083 frr ribosome recycling factor; Reviewed
Probab=28.28 E-value=4.7e+02 Score=24.35 Aligned_cols=49 Identities=20% Similarity=0.292 Sum_probs=32.1
Q ss_pred HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 419 ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 419 ~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
..+++.+...++-+++. . .+..|||.+|.+| +|--++++..+++....+
T Consensus 76 ~~I~kAI~~s~lgl~P~----~----dg~~Iri~iP~lT-----~E~R~elvK~~k~~~E~a 124 (185)
T PRK00083 76 KAIEKAIRASDLGLNPS----N----DGTVIRLPIPPLT-----EERRKELVKQVKKEAEEA 124 (185)
T ss_pred HHHHHHHHHCCCCCCcc----c----CCCEEEecCCCCC-----HHHHHHHHHHHHHHHHHH
Confidence 55777787777655432 1 2457999999866 566667777776665443
No 428
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=26.69 E-value=1.6e+02 Score=25.80 Aligned_cols=53 Identities=15% Similarity=0.097 Sum_probs=34.3
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g 279 (529)
.+|+++..+. ..+++++-+.+.+.++++|.+++....+...++++.+..++.|
T Consensus 29 ~GfeVi~lg~-----~~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g 81 (132)
T TIGR00640 29 LGFDVDVGPL-----FQTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLG 81 (132)
T ss_pred CCcEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcC
Confidence 3467766543 3567777666666689999887554444445777777777764
No 429
>PF01904 DUF72: Protein of unknown function DUF72; InterPro: IPR002763 The function of this family is unknown. Aquifex aeolicus has two copies of this protein. A probable aspartyl-tRNA synthetase from Escherichia coli [] belongs to this group.; PDB: 1VPY_A 1ZTV_A 1VPQ_A.
Probab=26.48 E-value=2e+02 Score=27.72 Aligned_cols=71 Identities=17% Similarity=0.118 Sum_probs=36.4
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCC---CCCC-----CCCCeEEE-ccCCC--ccCCCCHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSVPG---DKSA-----LVPGGIRI-GSPAM--TTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg---~~~~-----~~~~~iRi-g~~~~--tt~g~~~~d~~~la~~i~~~ 476 (529)
.+.++...+..+++.+.|+++||.....-.|. .... ..-.++|+ |.... ....+++++++++++.|.+.
T Consensus 121 avE~R~~sW~~~~~~~~l~~~~~~~v~~d~~~~~~~p~~~~~~~~~~~y~RlhG~~~~~~~~~~Ys~~eL~~~a~~i~~~ 200 (230)
T PF01904_consen 121 AVEFRHPSWFTEEVFELLREHGVALVIADSPRLPSLPPPEPQTTPDFAYVRLHGRNGEGWYDYRYSDEELEEWAERIRAW 200 (230)
T ss_dssp EEE--BGGGGCHHHHHHHHHTT-EEEEEE---BTTC------SSTTEEEEEE--S-TTTTTB----HHHHHHHHHHHHHH
T ss_pred EEecCCcchhhHHHHHHHHHcCCEEEEeCCcccCCCCCcccccCCCCeEEeeccCcccccccccCCHHHHHHHHHHHHHH
Confidence 44555544445778899999988653211222 1111 12247997 54443 34457899999999999876
Q ss_pred HH
Q 009673 477 VE 478 (529)
Q Consensus 477 ~~ 478 (529)
..
T Consensus 201 ~~ 202 (230)
T PF01904_consen 201 AA 202 (230)
T ss_dssp HT
T ss_pred HH
Confidence 54
No 430
>PF14639 YqgF: Holliday-junction resolvase-like of SPT6 ; PDB: 3PSI_A 3PSF_A.
Probab=26.23 E-value=52 Score=29.59 Aligned_cols=43 Identities=21% Similarity=0.303 Sum_probs=25.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhC
Q 009673 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (529)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g 279 (529)
.-|.+.|.+.+..++|.+|.++..+..+..-.+.+.++.++..
T Consensus 49 ~~~~~~l~~~i~~~kP~vI~v~g~~~~s~~l~~~v~~~v~~~~ 91 (150)
T PF14639_consen 49 EEDMERLKKFIEKHKPDVIAVGGNSRESRKLYDDVRDIVEELD 91 (150)
T ss_dssp HHHHHHHHHHHHHH--SEEEE--SSTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHHHHHHHhh
Confidence 4567778899999999999996533222333456666666653
No 431
>TIGR03275 methan_mark_8 putative methanogenesis marker protein 8. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=25.63 E-value=24 Score=34.12 Aligned_cols=81 Identities=23% Similarity=0.343 Sum_probs=50.2
Q ss_pred CCCCCCCCH-HHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEe
Q 009673 232 DESTGLVDY-DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTT 310 (529)
Q Consensus 232 ~~~~~~iD~-d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~ 310 (529)
|+++-.||. .-++++++. .-|=|.++.. ...+.++|+++-.++|+-++.=+.|..|+...+ ....++++|++++
T Consensus 143 d~~tA~IDq~~Gv~~Aie~-Gyk~IaVTv~---~~~~a~~iRe~e~~~~~~~~if~VHtTGis~ee-a~~~~~~aDivt~ 217 (259)
T TIGR03275 143 DPDTATIDQIKGVEKAIEL-GYKKIAVTVA---DAEDAKAIRELESESGIDIIIFAVHTTGIDRED-AEEVVQYADIVTS 217 (259)
T ss_pred CCccccccHHHHHHHHHHc-CCceEEEEec---CHHHHHHHHHhccccCCcEEEEEEECCCCCHHH-HHHHHHhhhHHHH
Confidence 344445554 335666654 3443444322 134678888888778777777778988864322 1122458999999
Q ss_pred ccccccc
Q 009673 311 TTHKSLR 317 (529)
Q Consensus 311 S~hK~l~ 317 (529)
..||+++
T Consensus 218 CASK~ir 224 (259)
T TIGR03275 218 CASKNIR 224 (259)
T ss_pred hchHHHH
Confidence 9999974
No 432
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=25.61 E-value=38 Score=33.45 Aligned_cols=28 Identities=14% Similarity=0.291 Sum_probs=23.4
Q ss_pred CCCCCCCCHHHHHHHHHHhCCEEEEecc
Q 009673 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (529)
Q Consensus 260 s~~p~~~d~~~i~~ia~~~g~~livD~a 287 (529)
+.+++..+++++++.|+++|+.||.|.+
T Consensus 46 ~~~Gt~~d~~~Lv~~~h~~gi~VilD~V 73 (316)
T PF00128_consen 46 PRFGTMEDFKELVDAAHKRGIKVILDVV 73 (316)
T ss_dssp TTTBHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cccchhhhhhhhhhccccccceEEEeee
Confidence 4445566899999999999999999975
No 433
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=25.27 E-value=3.8e+02 Score=26.81 Aligned_cols=47 Identities=26% Similarity=0.376 Sum_probs=33.3
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCC----CCC-----------HHHHHHHHHHhCCEEEE
Q 009673 237 LVDYDMLEKTAILFRPKLIIAGASAYPR----DFD-----------YPRMRQIADAVGALLMM 284 (529)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~p~----~~d-----------~~~i~~ia~~~g~~liv 284 (529)
..|++.+++.+.+.+|++||-. -.|.. ..+ ...|+++|+++|+++|.
T Consensus 36 itd~~~v~~~i~~~~PDvVIn~-AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVh 97 (281)
T COG1091 36 ITDPDAVLEVIRETRPDVVINA-AAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVH 97 (281)
T ss_pred ccChHHHHHHHHhhCCCEEEEC-ccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEE
Confidence 4578999999998899988754 22221 111 34688999999999875
No 434
>PF03437 BtpA: BtpA family; InterPro: IPR005137 Photosystem I (PSI) is a large protein complex embedded within the photosynthetic thylakoid membrane. It consists of 11 subunits, ~100 chlorophyll a molecules, 2 phylloquinones, and 3 Fe4S4-clusters. The three dimensional structure of the PSI complex has been resolved at 2.5 A [], which allows the precise localisation of each cofactor. PSI together with photosystem II (PSII) catalyses the light-induced steps in oxygenic photosynthesis - a process found in cyanobacteria, eukaryotic algae (e.g. red algae, green algae) and higher plants. To date, three thylakoid proteins involved in the stable accumulation of PSI have been identified: BtpA [], Ycf3 [, ], and Ycf4 (IPR003359 from INTERPRO) []. Because translation of the psaA and psaB mRNAs encoding the two reaction centre polypeptides, of PSI and PSII respectively, is not affected in mutant strains lacking functional ycf3 and ycf4, the products of these two genes appear to act at a post-translational step of PSI biosynthesis. These gene products are therefore involved either in the stabilisation or in the assembly of the PSI complex. However, their exact roles remain unknown. The BtpA protein appears to act at the level of PSI stabilisation []. It is an extrinsic membrane protein located on the cytoplasmic side of the thylakoid membrane [, ]. Homologs of BtpA are found in the crenarchaeota and euryarchaeota, where their function remains unknown. The Ycf4 protein is firmly associated with the thylakoid membrane, presumably through a transmembrane domain []. Ycf4 co-fractionates with a protein complex larger than PSI upon sucrose density gradient centrifugation of solubilised thylakoids []. The Ycf3 protein is loosely associated with the thylakoid membrane and can be released from the membrane with sodium carbonate. This suggests that Ycf3 is not part of a stable complex and that it probably interacts transiently with its partners []. Ycf3 contains a number of tetratrico peptide repeats (TPR, IPR001440 from INTERPRO); TPR is a structural motif present in a wide range of proteins, which mediates protein-protein interactions.
Probab=24.80 E-value=93 Score=30.62 Aligned_cols=71 Identities=15% Similarity=0.262 Sum_probs=45.2
Q ss_pred CHHHH-HHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCccc-EEEecccc
Q 009673 239 DYDML-EKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCD-VVTTTTHK 314 (529)
Q Consensus 239 D~d~l-e~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aD-iv~~S~hK 314 (529)
|+++. +..+....++.|+++.+..+...++++|.++.+..+++|++- +|....+.. .-+..+| ++++|.=|
T Consensus 159 ~~~~~~~~a~~~~~aDaviVtG~~TG~~~~~~~l~~vr~~~~~PVlvG----SGvt~~Ni~-~~l~~ADG~IVGS~~K 231 (254)
T PF03437_consen 159 DLEEAAKDAVERGGADAVIVTGKATGEPPDPEKLKRVREAVPVPVLVG----SGVTPENIA-EYLSYADGAIVGSYFK 231 (254)
T ss_pred CHHHHHHHHHHhcCCCEEEECCcccCCCCCHHHHHHHHhcCCCCEEEe----cCCCHHHHH-HHHHhCCEEEEeeeee
Confidence 44444 344455678999999888888888998888888778888863 454432211 1122467 55565445
No 435
>COG3414 SgaB Phosphotransferase system, galactitol-specific IIB component [Carbohydrate transport and metabolism]
Probab=23.97 E-value=1.7e+02 Score=24.02 Aligned_cols=70 Identities=10% Similarity=0.180 Sum_probs=38.2
Q ss_pred cEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccc--ccccCCCCeEEEeeC
Q 009673 253 KLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKK 328 (529)
Q Consensus 253 klIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~h--K~l~GprgG~i~~~~ 328 (529)
|+++++...-++ ..=-.++.++++++|+.+-+|..+. + .......++|+++.|.| ..|.....|.++.-.
T Consensus 3 KIL~aCG~GvgSS~~ik~kve~~l~~~gi~~~~~~~~v-~-----~~~~~~~~aDiiv~s~~l~~~~~~~~~~~v~~~~ 75 (93)
T COG3414 3 KILAACGNGVGSSTMIKMKVEEVLKELGIDVDVEQCAV-D-----EIKALTDGADIIVTSTKLADEFEDIPKGYVVITG 75 (93)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHHcCCCceeeeEEe-c-----ccccCCCcccEEEEehHhhhhcCcCCCceEEEEc
Confidence 555555544433 1212467889999999844443322 2 11222236899998877 445322226655543
No 436
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=22.89 E-value=2.6e+02 Score=28.29 Aligned_cols=50 Identities=14% Similarity=0.103 Sum_probs=35.7
Q ss_pred CCCCHHHHHHHhhhcCCcEEEE-----cCCCC--CCCCCHHHHHHHHHHhCCEEEEec
Q 009673 236 GLVDYDMLEKTAILFRPKLIIA-----GASAY--PRDFDYPRMRQIADAVGALLMMDM 286 (529)
Q Consensus 236 ~~iD~d~le~~i~~~~pklIi~-----~~s~~--p~~~d~~~i~~ia~~~g~~livD~ 286 (529)
..+|.+++.++.++ .+..|+- +.... .+..|++.-.++++.-++++++-.
T Consensus 136 ~nid~d~i~aa~re-h~d~ivGlKvR~s~~~~g~~GitPl~la~~ia~~~klPlmvHi 192 (386)
T COG3964 136 DNIDEDKIHAAFRE-HRDVIVGLKVRVSTEDIGEYGITPLTLALRIANDLKLPLMVHI 192 (386)
T ss_pred hhCCHHHHHHHHHh-CcCcEEEEEEEeeeccccccCCchHHHHHHHHhhcCCceEEec
Confidence 37999999999988 4554441 11211 237789998999999999998643
No 437
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=22.69 E-value=68 Score=25.66 Aligned_cols=20 Identities=25% Similarity=0.272 Sum_probs=17.9
Q ss_pred HHHHHHHHHHhCCEEEEecc
Q 009673 268 YPRMRQIADAVGALLMMDMA 287 (529)
Q Consensus 268 ~~~i~~ia~~~g~~livD~a 287 (529)
-++|.++|+++|++++.|..
T Consensus 29 A~~I~~~A~e~~VPi~~~~~ 48 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPD 48 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 56899999999999999964
No 438
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=22.56 E-value=59 Score=35.18 Aligned_cols=28 Identities=11% Similarity=0.114 Sum_probs=25.2
Q ss_pred CCCCCCCCHHHHHHHHHHhCCEEEEecc
Q 009673 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (529)
Q Consensus 260 s~~p~~~d~~~i~~ia~~~g~~livD~a 287 (529)
|.+++..+++++++-|+++|+.||+|.+
T Consensus 75 ~~fGt~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 75 TKYGTKEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred cCcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 6677788999999999999999999975
No 439
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=22.52 E-value=6.3e+02 Score=25.65 Aligned_cols=54 Identities=30% Similarity=0.407 Sum_probs=30.6
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-HHHHHHHHHhhcCCCCEEEEcC
Q 009673 141 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLD 199 (529)
Q Consensus 141 ~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s~A~~~~l~all~pGD~Vl~~~ 199 (529)
++..+++-.++. +++..+++..|. +.|.+.|| |.|-+++=.+.+.|+.+|+..+
T Consensus 160 g~lGyv~~a~Ei-~~Q~~~~~~fD~----vVva~gs~gT~AGl~~g~~~~~~~~~ViG~~ 214 (323)
T COG2515 160 GALGYVRLALEI-AEQAEQLLKFDS----VVVAPGSGGTHAGLLVGLAQLGPDVEVIGID 214 (323)
T ss_pred ccccHHHHHHHH-HHHHhhccCCCE----EEEeCCCcchHHHHHHHhhhccCCCceEEEe
Confidence 334455544433 245555555443 34555554 4777766667777888888665
No 440
>TIGR01769 GGGP geranylgeranylglyceryl phosphate synthase. This model represents geranylgeranylglyceryl phosphate synthase which catalyzes the first committed step in the synthesis of ether-linked membrane lipids in archaea. The active enzyme is reported to be a homopentamer in Methanobacterium thermoautotrophicum but is reported to be a homodimer in Thermoplasma acidophilum.
Probab=22.11 E-value=1.3e+02 Score=28.53 Aligned_cols=53 Identities=11% Similarity=0.103 Sum_probs=33.5
Q ss_pred cCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHH-hCCEEEE
Q 009673 231 LDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADA-VGALLMM 284 (529)
Q Consensus 231 v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~-~g~~liv 284 (529)
+||+.. -+.+++.+.+.+..+++|+++.|..-+..++.++.+.+|+ .+++++.
T Consensus 5 iDP~k~-e~~~~ia~~v~~~gtDaI~VGGS~gvt~~~~~~~v~~ik~~~~lPvil 58 (205)
T TIGR01769 5 IDPEKS-DEIEKIAKNAKDAGTDAIMVGGSLGIVESNLDQTVKKIKKITNLPVIL 58 (205)
T ss_pred cCCCcH-HHHHHHHHHHHhcCCCEEEEcCcCCCCHHHHHHHHHHHHhhcCCCEEE
Confidence 455443 3333333445554689999987754445567777777787 5788876
No 441
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=21.85 E-value=3.4e+02 Score=20.06 Aligned_cols=47 Identities=19% Similarity=0.126 Sum_probs=32.6
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEE
Q 009673 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMM 284 (529)
Q Consensus 236 ~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~liv 284 (529)
+..+++++-+.+.+..-+.+.++-.++ .....++.+.++++|+.++.
T Consensus 13 ~~~~~~~~~~~a~~~g~~~v~iTDh~~--~~~~~~~~~~~~~~gi~~i~ 59 (67)
T smart00481 13 GALSPEELVKRAKELGLKAIAITDHGN--LFGAVEFYKAAKKAGIKPII 59 (67)
T ss_pred ccCCHHHHHHHHHHcCCCEEEEeeCCc--ccCHHHHHHHHHHcCCeEEE
Confidence 456788887777766778887764432 34456778888888877664
No 442
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=21.69 E-value=1.2e+02 Score=26.21 Aligned_cols=44 Identities=23% Similarity=0.232 Sum_probs=24.0
Q ss_pred CCCHHH----HHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEe
Q 009673 237 LVDYDM----LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 285 (529)
Q Consensus 237 ~iD~d~----le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD 285 (529)
.+|.+. +++.+.. ++-+||++... .+.+.+.++|++++++|+.=
T Consensus 64 ~l~~~~r~~~l~~l~~~-~~P~iIvt~~~----~~p~~l~e~a~~~~ipll~t 111 (127)
T PF02603_consen 64 SLDEEERKERLEKLFSY-NPPCIIVTRGL----EPPPELIELAEKYNIPLLRT 111 (127)
T ss_dssp CS-HHHHCCHHHHHCTT-T-S-EEEETTT-------HHHHHHHHHCT--EEEE
T ss_pred HCCHHHHHHHHHHHhCC-CCCEEEEECcC----CCCHHHHHHHHHhCCcEEEc
Confidence 355554 3444443 67777776432 45689999999999988753
No 443
>COG0233 Frr Ribosome recycling factor [Translation, ribosomal structure and biogenesis]
Probab=20.74 E-value=7e+02 Score=23.31 Aligned_cols=47 Identities=23% Similarity=0.296 Sum_probs=30.5
Q ss_pred HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 419 ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 419 ~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
..+++.....++-+++. . .+.-||+.+|.+| +|.-++++..++....
T Consensus 78 ~~IekaI~~snLglnP~----~----dG~~IRv~~P~lT-----eErRkelvK~~k~~~E 124 (187)
T COG0233 78 KAIEKAILASNLGLNPN----N----DGNVIRVPLPPLT-----EERRKELVKVAKKYAE 124 (187)
T ss_pred HHHHHHHHHcCCCCCcC----c----CCCeEEecCCCCC-----HHHHHHHHHHHHHHHH
Confidence 56777777766666432 1 2345999999877 5666666666655543
No 444
>PF01248 Ribosomal_L7Ae: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; InterPro: IPR004038 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, ribosomal protein L30 from eukaryotes and archaebacteria, Gadd45 and MyD118 [].; PDB: 2CZW_A 3V7E_B 2QEX_F 1YJ9_F 1VQ8_F 1YJN_F 3I56_F 1VQ6_F 2OTJ_F 1YIJ_F ....
Probab=20.64 E-value=1.8e+02 Score=23.37 Aligned_cols=44 Identities=11% Similarity=0.110 Sum_probs=30.8
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCCCCHHH-HHHHHHHhCCEEEEe
Q 009673 240 YDMLEKTAILFRPKLIIAGASAYPRDFDYPR-MRQIADAVGALLMMD 285 (529)
Q Consensus 240 ~d~le~~i~~~~pklIi~~~s~~p~~~d~~~-i~~ia~~~g~~livD 285 (529)
+.++.+.+...+.+++++.....+ ..... +..+|++++++++.=
T Consensus 20 ~~~v~k~l~~~~~~lvilA~d~~~--~~~~~~l~~~c~~~~Ip~~~~ 64 (95)
T PF01248_consen 20 IKEVLKALKKGKAKLVILAEDCSP--DSIKKHLPALCEEKNIPYVFV 64 (95)
T ss_dssp HHHHHHHHHTTCESEEEEETTSSS--GHHHHHHHHHHHHTTEEEEEE
T ss_pred hHHHHHHHHcCCCcEEEEcCCCCh--hhhcccchhheeccceeEEEE
Confidence 466777777657888888644332 34555 888999999988654
No 445
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=20.46 E-value=1.6e+02 Score=23.35 Aligned_cols=44 Identities=14% Similarity=0.014 Sum_probs=31.0
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEe
Q 009673 240 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 285 (529)
Q Consensus 240 ~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD 285 (529)
.++..+.++..+.++|++.....+ .-.+.|..+|++++++++.-
T Consensus 16 ~~~v~kai~~gkaklViiA~D~~~--~~~~~i~~~c~~~~Vp~~~~ 59 (82)
T PRK13602 16 TKQTVKALKRGSVKEVVVAEDADP--RLTEKVEALANEKGVPVSKV 59 (82)
T ss_pred HHHHHHHHHcCCeeEEEEECCCCH--HHHHHHHHHHHHcCCCEEEE
Confidence 466777777667888888633322 23567889999999988654
No 446
>TIGR01768 GGGP-family geranylgeranylglyceryl phosphate synthase family protein. This model represents a family of sequences including geranylgeranylglyceryl phosphate synthase which catalyzes the first committed step in the synthesis of ether-linked membrane lipids in archaea. The clade of bacterial sequences may have the same function or a closely related function. This model supercedes TIGR00265, which has been retired.
Probab=20.25 E-value=2.2e+02 Score=27.38 Aligned_cols=46 Identities=11% Similarity=0.044 Sum_probs=35.2
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEE
Q 009673 238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMM 284 (529)
Q Consensus 238 iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~liv 284 (529)
...+.++++... .+++|+++.|.+-+...+.++.+..+++.++++.
T Consensus 15 ~~~~~~~~~~~~-gtdai~vGGS~~vt~~~~~~~v~~ik~~~lPvil 60 (223)
T TIGR01768 15 EADEIAKAAAES-GTDAILIGGSQGVTYEKTDTLIEALRRYGLPIIL 60 (223)
T ss_pred ccHHHHHHHHhc-CCCEEEEcCCCcccHHHHHHHHHHHhccCCCEEE
Confidence 455555655554 7999999988776666788888888899988876
Done!