Query 009673
Match_columns 529
No_of_seqs 371 out of 3411
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 10:29:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009673.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009673hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ou5_A Serine hydroxymethyltra 100.0 7E-101 2E-105 788.0 36.8 450 77-529 29-487 (490)
2 2a7v_A Serine hydroxymethyltra 100.0 2.7E-73 9.4E-78 608.1 36.0 447 80-529 32-487 (490)
3 1rv3_A Serine hydroxymethyltra 100.0 4E-65 1.4E-69 547.7 39.8 452 77-529 19-480 (483)
4 3h7f_A Serine hydroxymethyltra 100.0 4.9E-52 1.7E-56 441.8 36.0 408 80-527 23-436 (447)
5 3n0l_A Serine hydroxymethyltra 100.0 2.1E-48 7.2E-53 408.1 40.4 409 81-528 4-413 (417)
6 3gbx_A Serine hydroxymethyltra 100.0 3.7E-46 1.3E-50 391.1 36.0 409 83-528 11-420 (420)
7 3ecd_A Serine hydroxymethyltra 100.0 2E-45 7E-50 386.1 37.2 417 78-527 8-425 (425)
8 2dkj_A Serine hydroxymethyltra 100.0 9.4E-41 3.2E-45 348.8 36.8 402 84-527 5-407 (407)
9 2vi8_A Serine hydroxymethyltra 100.0 2.7E-40 9.3E-45 345.1 35.6 401 82-521 3-404 (405)
10 3zrp_A Serine-pyruvate aminotr 100.0 5.8E-28 2E-32 249.3 28.0 332 105-480 4-363 (384)
11 3nnk_A Ureidoglycine-glyoxylat 100.0 1.7E-27 5.7E-32 248.5 31.3 335 104-479 14-389 (411)
12 3isl_A Purine catabolism prote 100.0 1.7E-27 5.8E-32 248.9 31.1 335 104-479 12-389 (416)
13 1iug_A Putative aspartate amin 100.0 8.9E-28 3E-32 245.1 26.6 324 105-478 3-346 (352)
14 2huf_A Alanine glyoxylate amin 100.0 2.6E-27 9E-32 245.7 30.3 334 104-479 20-382 (393)
15 2dr1_A PH1308 protein, 386AA l 100.0 4.9E-27 1.7E-31 242.7 31.4 327 108-479 25-378 (386)
16 3f0h_A Aminotransferase; RER07 100.0 2E-27 6.8E-32 245.1 26.7 331 103-478 19-372 (376)
17 3tqx_A 2-amino-3-ketobutyrate 100.0 1.8E-27 6.1E-32 247.3 25.8 335 103-479 44-395 (399)
18 3kgw_A Alanine-glyoxylate amin 100.0 5.8E-27 2E-31 242.5 28.1 335 104-479 24-387 (393)
19 1t3i_A Probable cysteine desul 100.0 8E-27 2.7E-31 243.8 28.5 345 104-479 29-412 (420)
20 2yrr_A Aminotransferase, class 100.0 5.4E-27 1.9E-31 238.9 26.5 328 105-478 2-351 (353)
21 1kmj_A Selenocysteine lyase; p 100.0 1E-26 3.5E-31 241.7 29.1 343 104-478 24-403 (406)
22 1vjo_A Alanine--glyoxylate ami 100.0 1.6E-26 5.6E-31 239.9 29.8 329 105-477 36-392 (393)
23 4hvk_A Probable cysteine desul 100.0 5E-27 1.7E-31 241.6 25.5 335 110-480 8-373 (382)
24 1m32_A 2-aminoethylphosphonate 100.0 1.1E-26 3.8E-31 237.8 27.6 333 104-478 5-363 (366)
25 1b5p_A Protein (aspartate amin 100.0 9.8E-27 3.4E-31 241.6 27.6 333 103-477 32-382 (385)
26 3f9t_A TDC, L-tyrosine decarbo 100.0 6.3E-26 2.2E-30 234.6 33.1 328 107-478 35-396 (397)
27 2ch1_A 3-hydroxykynurenine tra 100.0 1.8E-26 6.1E-31 239.6 28.7 331 105-479 20-382 (396)
28 1gd9_A Aspartate aminotransfer 100.0 1.8E-26 6.2E-31 239.3 28.1 357 83-479 7-385 (389)
29 3dzz_A Putative pyridoxal 5'-p 100.0 5.2E-27 1.8E-31 243.1 23.6 338 103-478 28-387 (391)
30 3cai_A Possible aminotransfera 100.0 1.3E-26 4.4E-31 241.7 26.7 340 104-475 27-404 (406)
31 2z9v_A Aspartate aminotransfer 100.0 1.5E-26 5E-31 240.0 26.5 332 105-479 10-370 (392)
32 3ly1_A Putative histidinol-pho 100.0 6.4E-26 2.2E-30 232.1 30.7 318 103-478 17-350 (354)
33 2w8t_A SPT, serine palmitoyltr 100.0 4.5E-26 1.5E-30 240.2 30.3 334 104-479 66-414 (427)
34 4dq6_A Putative pyridoxal phos 99.9 2E-26 6.9E-31 238.7 26.4 348 87-477 18-390 (391)
35 3h14_A Aminotransferase, class 99.9 3E-26 1E-30 238.0 27.3 338 102-480 31-382 (391)
36 1fc4_A 2-amino-3-ketobutyrate 99.9 2.2E-26 7.6E-31 239.7 26.2 333 103-478 46-395 (401)
37 1elu_A L-cysteine/L-cystine C- 99.9 8.4E-27 2.9E-31 241.2 22.6 337 103-475 16-387 (390)
38 3euc_A Histidinol-phosphate am 99.9 4.6E-26 1.6E-30 234.4 27.3 320 103-477 31-365 (367)
39 3hbx_A GAD 1, glutamate decarb 99.9 1.8E-25 6.1E-30 240.7 32.9 340 112-480 66-444 (502)
40 4eb5_A Probable cysteine desul 99.9 5.6E-26 1.9E-30 234.4 27.7 336 112-480 10-373 (382)
41 3get_A Histidinol-phosphate am 99.9 5.2E-26 1.8E-30 233.8 27.4 319 102-477 30-364 (365)
42 1eg5_A Aminotransferase; PLP-d 99.9 1.2E-25 4.3E-30 231.7 29.8 343 105-479 3-375 (384)
43 3lvm_A Cysteine desulfurase; s 99.9 5.7E-26 1.9E-30 238.1 27.6 347 101-481 20-400 (423)
44 1j32_A Aspartate aminotransfer 99.9 1.5E-25 5.1E-30 232.4 29.4 336 102-478 30-385 (388)
45 1bs0_A Protein (8-amino-7-oxon 99.9 5E-26 1.7E-30 235.6 25.5 332 103-476 40-383 (384)
46 2bkw_A Alanine-glyoxylate amin 99.9 4.2E-26 1.4E-30 235.6 24.8 334 103-478 5-382 (385)
47 3kax_A Aminotransferase, class 99.9 4.8E-26 1.6E-30 235.2 25.0 334 103-477 25-382 (383)
48 3ffh_A Histidinol-phosphate am 99.9 2.8E-25 9.5E-30 228.2 30.2 315 103-476 33-362 (363)
49 3fvs_A Kynurenine--oxoglutarat 99.9 8.4E-26 2.9E-30 236.9 26.2 365 80-478 7-420 (422)
50 3g0t_A Putative aminotransfera 99.9 1.4E-25 4.8E-30 236.3 27.0 341 102-478 44-435 (437)
51 2dou_A Probable N-succinyldiam 99.9 7.7E-26 2.6E-30 233.7 24.5 335 103-477 26-375 (376)
52 1v2d_A Glutamine aminotransfer 99.9 1.4E-25 4.7E-30 232.2 26.2 349 83-480 7-371 (381)
53 3kki_A CAI-1 autoinducer synth 99.9 1.1E-25 3.6E-30 235.6 25.3 321 114-479 74-403 (409)
54 1u08_A Hypothetical aminotrans 99.9 2.4E-25 8.3E-30 230.8 27.6 355 83-475 12-385 (386)
55 1o4s_A Aspartate aminotransfer 99.9 2.9E-25 1E-29 230.8 28.2 329 103-478 42-387 (389)
56 3p1t_A Putative histidinol-pho 99.9 6.1E-25 2.1E-29 223.0 29.9 313 101-477 15-334 (337)
57 3ffr_A Phosphoserine aminotran 99.9 1.1E-25 3.8E-30 230.2 24.3 330 103-477 4-361 (362)
58 3l8a_A METC, putative aminotra 99.9 6.5E-26 2.2E-30 238.3 23.1 337 102-478 61-420 (421)
59 1c7n_A Cystalysin; transferase 99.9 1.5E-25 5.3E-30 233.1 25.6 337 103-479 32-392 (399)
60 3nra_A Aspartate aminotransfer 99.9 1.1E-25 3.8E-30 234.6 24.4 339 104-479 41-404 (407)
61 1yiz_A Kynurenine aminotransfe 99.9 1E-24 3.5E-29 229.4 31.7 361 82-477 18-426 (429)
62 2x5d_A Probable aminotransfera 99.9 2.3E-25 7.8E-30 233.3 26.1 337 103-479 38-397 (412)
63 3a2b_A Serine palmitoyltransfe 99.9 3.3E-25 1.1E-29 230.7 26.8 333 103-478 44-390 (398)
64 3cq5_A Histidinol-phosphate am 99.9 3.2E-24 1.1E-28 221.2 33.7 322 105-478 33-366 (369)
65 3ele_A Amino transferase; RER0 99.9 9.7E-25 3.3E-29 227.0 29.8 336 103-479 36-395 (398)
66 2gb3_A Aspartate aminotransfer 99.9 3E-25 1E-29 232.2 25.9 338 102-479 43-401 (409)
67 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1.9E-26 6.6E-31 237.1 16.4 332 103-478 8-368 (371)
68 3b46_A Aminotransferase BNA3; 99.9 3.2E-25 1.1E-29 235.1 25.9 356 86-475 33-442 (447)
69 2o0r_A RV0858C (N-succinyldiam 99.9 2.5E-25 8.6E-30 232.9 24.8 361 82-479 6-395 (411)
70 3e2y_A Kynurenine-oxoglutarate 99.9 1.9E-25 6.5E-30 233.1 23.8 341 102-475 23-408 (410)
71 3fdb_A Beta C-S lyase, putativ 99.9 2E-25 7E-30 230.1 23.1 334 102-478 23-374 (377)
72 3vax_A Putative uncharacterize 99.9 2.6E-26 8.8E-31 238.8 16.5 342 103-478 20-398 (400)
73 3mc6_A Sphingosine-1-phosphate 99.9 2E-25 6.7E-30 239.8 23.7 328 115-480 77-437 (497)
74 3dr4_A Putative perosamine syn 99.9 5.4E-26 1.9E-30 236.2 17.8 332 103-477 23-390 (391)
75 3dyd_A Tyrosine aminotransfera 99.9 7.9E-25 2.7E-29 230.6 26.7 338 103-479 55-423 (427)
76 2z61_A Probable aspartate amin 99.9 9.7E-25 3.3E-29 224.9 26.6 327 102-477 29-368 (370)
77 1d2f_A MALY protein; aminotran 99.9 8.9E-25 3E-29 226.8 26.0 335 103-478 29-387 (390)
78 2dgk_A GAD-beta, GADB, glutama 99.9 3.7E-24 1.3E-28 227.2 31.2 339 112-480 52-434 (452)
79 1xi9_A Putative transaminase; 99.9 4E-25 1.4E-29 230.9 23.0 342 102-479 38-402 (406)
80 2o1b_A Aminotransferase, class 99.9 2.8E-25 9.6E-30 232.3 20.8 338 103-478 48-401 (404)
81 2c0r_A PSAT, phosphoserine ami 99.9 5.9E-25 2E-29 225.8 22.6 331 104-478 5-359 (362)
82 3jtx_A Aminotransferase; NP_28 99.9 2.1E-24 7.2E-29 224.1 25.9 333 103-477 31-395 (396)
83 1b9h_A AHBA synthase, protein 99.9 2E-24 6.7E-29 224.1 25.0 321 114-478 15-386 (388)
84 3a9z_A Selenocysteine lyase; P 99.9 4E-24 1.4E-28 225.0 27.1 350 103-479 18-427 (432)
85 3hvy_A Cystathionine beta-lyas 99.9 2.5E-24 8.4E-29 226.3 25.2 282 85-400 15-325 (427)
86 3ke3_A Putative serine-pyruvat 99.9 7.2E-25 2.5E-29 227.3 20.8 307 142-479 30-375 (379)
87 3e9k_A Kynureninase; kynurenin 99.9 2.8E-25 9.5E-30 236.6 18.1 293 153-479 116-460 (465)
88 3hdo_A Histidinol-phosphate am 99.9 5.6E-24 1.9E-28 218.5 27.2 315 103-478 27-353 (360)
89 3rq1_A Aminotransferase class 99.9 2.4E-24 8.1E-29 225.9 24.5 349 84-479 15-414 (418)
90 3ju7_A Putative PLP-dependent 99.9 6.4E-25 2.2E-29 227.8 19.6 322 113-479 13-374 (377)
91 1qz9_A Kynureninase; kynurenin 99.9 4.1E-24 1.4E-28 223.4 25.9 325 104-479 29-401 (416)
92 3aow_A Putative uncharacterize 99.9 4.9E-24 1.7E-28 226.2 26.8 340 102-479 76-444 (448)
93 2zc0_A Alanine glyoxylate tran 99.9 1.1E-23 3.8E-28 219.7 28.9 342 103-479 35-403 (407)
94 2fnu_A Aminotransferase; prote 99.9 9.7E-25 3.3E-29 224.7 20.6 323 110-479 7-371 (375)
95 1jg8_A L-ALLO-threonine aldola 99.9 1.1E-24 3.9E-29 222.1 20.4 324 104-478 5-344 (347)
96 1mdo_A ARNB aminotransferase; 99.9 2.6E-24 8.8E-29 223.3 23.5 330 104-480 10-386 (393)
97 2bwn_A 5-aminolevulinate synth 99.9 8.1E-24 2.8E-28 220.4 27.2 331 105-478 49-398 (401)
98 2zyj_A Alpha-aminodipate amino 99.9 6.5E-24 2.2E-28 221.0 26.2 337 102-480 32-393 (397)
99 3qgu_A LL-diaminopimelate amin 99.9 4.3E-24 1.5E-28 226.1 24.9 339 103-478 70-438 (449)
100 2r2n_A Kynurenine/alpha-aminoa 99.9 2.7E-23 9.3E-28 218.7 30.4 304 148-478 82-422 (425)
101 3piu_A 1-aminocyclopropane-1-c 99.9 6.4E-24 2.2E-28 224.0 25.1 345 103-479 39-431 (435)
102 2oga_A Transaminase; PLP-depen 99.9 2.9E-24 9.8E-29 224.2 21.9 330 103-478 31-394 (399)
103 3uwc_A Nucleotide-sugar aminot 99.9 8.6E-25 3E-29 225.3 17.4 325 104-478 8-369 (374)
104 3frk_A QDTB; aminotransferase, 99.9 3E-25 1E-29 229.1 13.9 319 112-477 13-365 (373)
105 3mad_A Sphingosine-1-phosphate 99.9 3.5E-23 1.2E-27 223.3 30.5 304 144-480 135-469 (514)
106 2c81_A Glutamine-2-deoxy-scyll 99.9 6.7E-24 2.3E-28 222.6 24.1 330 112-478 12-412 (418)
107 1iay_A ACC synthase 2, 1-amino 99.9 1.3E-23 4.5E-28 221.0 25.8 339 103-478 37-425 (428)
108 3ezs_A Aminotransferase ASPB; 99.9 1.1E-23 3.9E-28 217.1 24.3 325 103-478 24-373 (376)
109 1wyu_B Glycine dehydrogenase s 99.9 4.6E-23 1.6E-27 220.3 29.8 327 114-479 78-440 (474)
110 1bw0_A TAT, protein (tyrosine 99.9 1.5E-23 5.1E-28 219.5 25.5 341 103-479 34-412 (416)
111 1vp4_A Aminotransferase, putat 99.9 1.5E-23 5.3E-28 220.4 25.6 339 103-479 44-417 (425)
112 3if2_A Aminotransferase; YP_26 99.9 1.5E-23 5.2E-28 221.5 25.3 351 102-480 31-440 (444)
113 1o69_A Aminotransferase; struc 99.9 4.8E-23 1.6E-27 214.6 28.1 324 111-479 7-386 (394)
114 1c4k_A Protein (ornithine deca 99.9 1.4E-23 4.7E-28 233.7 25.1 301 153-480 178-566 (730)
115 3i16_A Aluminum resistance pro 99.9 9.3E-24 3.2E-28 221.9 22.0 307 87-429 19-356 (427)
116 3nyt_A Aminotransferase WBPE; 99.9 2.3E-24 8E-29 222.2 17.2 319 107-475 7-359 (367)
117 2po3_A 4-dehydrase; external a 99.9 2.8E-23 9.4E-28 218.5 24.9 332 106-483 20-389 (424)
118 3tcm_A Alanine aminotransferas 99.9 2.1E-23 7.4E-28 224.3 23.9 331 114-480 107-494 (500)
119 3op7_A Aminotransferase class 99.9 2.8E-23 9.4E-28 214.3 23.8 287 155-479 70-370 (375)
120 3vp6_A Glutamate decarboxylase 99.9 3.2E-23 1.1E-27 223.5 25.0 312 142-477 129-502 (511)
121 3e77_A Phosphoserine aminotran 99.9 6.6E-24 2.2E-28 219.3 18.7 330 109-479 19-374 (377)
122 3ftb_A Histidinol-phosphate am 99.9 9.8E-23 3.3E-27 208.7 27.3 316 102-478 26-359 (361)
123 3m5u_A Phosphoserine aminotran 99.9 2.2E-23 7.4E-28 214.5 22.0 328 103-479 5-359 (361)
124 3t18_A Aminotransferase class 99.9 4.6E-23 1.6E-27 215.7 24.8 326 103-478 38-408 (413)
125 1v72_A Aldolase; PLP-dependent 99.9 3.3E-23 1.1E-27 211.5 22.7 323 104-479 9-352 (356)
126 3pj0_A LMO0305 protein; struct 99.9 8.4E-24 2.9E-28 216.7 18.2 330 101-476 12-358 (359)
127 3ei9_A LL-diaminopimelate amin 99.9 2.5E-23 8.5E-28 219.1 22.2 339 103-477 57-425 (432)
128 2x5f_A Aspartate_tyrosine_phen 99.9 2.9E-23 1E-27 218.4 22.7 335 102-478 47-427 (430)
129 1fg7_A Histidinol phosphate am 99.9 9.1E-23 3.1E-27 209.6 25.6 276 154-475 64-353 (356)
130 3qm2_A Phosphoserine aminotran 99.9 1.6E-24 5.6E-29 224.9 12.2 334 104-479 28-384 (386)
131 1w23_A Phosphoserine aminotran 99.9 8.4E-24 2.9E-28 216.6 17.2 326 104-478 4-358 (360)
132 1lc5_A COBD, L-threonine-O-3-p 99.9 1E-22 3.4E-27 209.5 25.1 318 103-478 25-358 (364)
133 3b8x_A WBDK, pyridoxamine 5-ph 99.9 1.6E-22 5.4E-27 210.1 25.9 316 109-473 8-389 (390)
134 3ihj_A Alanine aminotransferas 99.9 7.4E-23 2.5E-27 220.0 23.5 333 111-480 99-493 (498)
135 3ez1_A Aminotransferase MOCR f 99.9 8.8E-23 3E-27 214.2 23.1 357 83-480 7-415 (423)
136 2aeu_A Hypothetical protein MJ 99.9 7.6E-23 2.6E-27 211.9 22.0 332 90-480 14-371 (374)
137 4e1o_A HDC, histidine decarbox 99.9 1E-22 3.4E-27 218.1 23.6 332 114-479 91-477 (481)
138 3d6k_A Putative aminotransfera 99.9 7.4E-23 2.5E-27 215.1 21.3 359 80-480 11-418 (422)
139 3g7q_A Valine-pyruvate aminotr 99.9 5.9E-23 2E-27 214.7 20.5 346 102-480 31-413 (417)
140 1svv_A Threonine aldolase; str 99.9 1.7E-22 5.9E-27 206.2 22.1 322 104-478 15-356 (359)
141 2vyc_A Biodegradative arginine 99.9 1.5E-22 5.2E-27 227.0 23.4 298 153-480 210-605 (755)
142 3jzl_A Putative cystathionine 99.9 3.9E-22 1.3E-26 208.7 24.7 306 89-429 7-339 (409)
143 3lws_A Aromatic amino acid bet 99.9 8.6E-23 2.9E-27 209.1 19.2 330 105-477 13-356 (357)
144 3k40_A Aromatic-L-amino-acid d 99.9 3.6E-22 1.2E-26 213.4 24.3 312 141-479 106-470 (475)
145 3ppl_A Aspartate aminotransfer 99.9 9.6E-22 3.3E-26 206.7 26.7 294 155-480 85-420 (427)
146 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 1.5E-21 5E-26 206.2 27.3 321 110-478 37-434 (437)
147 3b1d_A Betac-S lyase; HET: PLP 99.8 5.3E-25 1.8E-29 229.0 0.0 336 103-478 32-391 (392)
148 4f4e_A Aromatic-amino-acid ami 99.9 2E-22 6.7E-27 211.7 19.3 350 81-477 26-419 (420)
149 2ez2_A Beta-tyrosinase, tyrosi 99.9 7.6E-22 2.6E-26 209.2 24.0 331 104-479 44-430 (456)
150 3fkd_A L-threonine-O-3-phospha 99.9 2E-21 7E-26 198.5 25.3 313 102-479 15-341 (350)
151 2okj_A Glutamate decarboxylase 99.9 2.5E-21 8.5E-26 208.4 27.2 310 144-478 128-500 (504)
152 2qma_A Diaminobutyrate-pyruvat 99.9 1.8E-21 6.3E-26 209.0 26.1 334 112-478 110-494 (497)
153 3k7y_A Aspartate aminotransfer 99.9 1E-21 3.6E-26 205.4 23.1 347 81-478 6-403 (405)
154 2x3l_A ORN/Lys/Arg decarboxyla 99.9 1.1E-22 3.8E-27 215.6 15.4 280 153-478 62-351 (446)
155 1gc0_A Methionine gamma-lyase; 99.9 2.3E-21 7.9E-26 202.3 25.2 321 106-476 31-397 (398)
156 1uu1_A Histidinol-phosphate am 99.9 6E-22 2.1E-26 201.4 20.1 302 103-475 20-333 (335)
157 2z67_A O-phosphoseryl-tRNA(SEC 99.9 6.2E-22 2.1E-26 210.5 21.0 335 111-477 89-455 (456)
158 3f6t_A Aspartate aminotransfer 99.9 2.3E-21 7.8E-26 210.1 25.4 340 105-480 106-525 (533)
159 3n75_A LDC, lysine decarboxyla 99.9 1.1E-21 3.6E-26 217.0 22.6 296 145-479 196-559 (715)
160 7aat_A Aspartate aminotransfer 99.9 8.6E-22 3E-26 205.0 20.6 328 103-477 29-400 (401)
161 3ht4_A Aluminum resistance pro 99.9 8.6E-22 2.9E-26 207.6 20.0 286 85-399 9-313 (431)
162 1js3_A DDC;, DOPA decarboxylas 99.9 1.5E-21 5.2E-26 209.0 22.0 331 115-479 87-473 (486)
163 2jis_A Cysteine sulfinic acid 99.9 2.5E-21 8.5E-26 209.0 23.7 308 144-478 144-513 (515)
164 3asa_A LL-diaminopimelate amin 99.9 2.4E-21 8.2E-26 201.9 22.7 329 103-478 34-391 (400)
165 2fyf_A PSAT, phosphoserine ami 99.9 1.1E-21 3.7E-26 204.5 19.7 324 103-478 40-396 (398)
166 3ruy_A Ornithine aminotransfer 99.9 8.8E-21 3E-25 196.8 24.7 312 114-477 53-391 (392)
167 1yaa_A Aspartate aminotransfer 99.9 1.3E-21 4.3E-26 204.6 18.1 327 103-478 30-409 (412)
168 2eh6_A Acoat, acetylornithine 99.9 2.9E-20 9.9E-25 191.4 27.8 310 114-476 45-374 (375)
169 3fsl_A Aromatic-amino-acid ami 99.9 1.9E-21 6.5E-26 201.9 18.7 327 103-476 27-396 (397)
170 2rfv_A Methionine gamma-lyase; 99.9 4.5E-21 1.5E-25 199.9 21.2 289 143-476 63-396 (398)
171 1pff_A Methionine gamma-lyase; 99.9 8.6E-21 3E-25 192.3 22.5 282 154-476 4-330 (331)
172 4h51_A Aspartate aminotransfer 99.9 6E-21 2E-25 200.2 21.7 354 82-480 23-417 (420)
173 1qgn_A Protein (cystathionine 99.9 1.3E-20 4.5E-25 199.2 24.5 289 143-478 113-443 (445)
174 1e5e_A MGL, methionine gamma-l 99.9 3.2E-20 1.1E-24 194.1 27.0 289 142-480 60-395 (404)
175 1wyu_A Glycine dehydrogenase ( 99.9 1.4E-20 4.8E-25 198.8 24.4 291 147-477 107-437 (438)
176 4eu1_A Mitochondrial aspartate 99.9 5.5E-21 1.9E-25 199.7 20.7 345 81-477 18-408 (409)
177 2zy4_A L-aspartate beta-decarb 99.9 4.6E-21 1.6E-25 208.1 20.6 340 104-480 106-522 (546)
178 2cb1_A O-acetyl homoserine sul 99.9 1.2E-19 4E-24 190.3 30.4 291 144-475 56-411 (412)
179 3meb_A Aspartate aminotransfer 99.9 3.9E-20 1.3E-24 196.1 26.3 350 82-478 27-442 (448)
180 3cog_A Cystathionine gamma-lya 99.9 9.7E-21 3.3E-25 198.1 21.0 288 143-476 66-398 (403)
181 1ax4_A Tryptophanase; tryptoph 99.9 1.2E-20 4.3E-25 200.4 22.1 328 116-480 55-441 (467)
182 1ajs_A Aspartate aminotransfer 99.9 5E-21 1.7E-25 200.0 18.4 327 103-478 31-409 (412)
183 2fq6_A Cystathionine beta-lyas 99.9 1.3E-20 4.3E-25 197.9 21.1 289 142-475 80-413 (415)
184 1vef_A Acetylornithine/acetyl- 99.9 2E-20 6.9E-25 194.2 20.9 309 113-477 61-394 (395)
185 3qhx_A Cystathionine gamma-syn 99.9 5.6E-20 1.9E-24 191.6 23.7 255 142-435 64-342 (392)
186 3ndn_A O-succinylhomoserine su 99.8 5E-20 1.7E-24 193.3 22.4 289 142-477 79-413 (414)
187 3ri6_A O-acetylhomoserine sulf 99.8 3.7E-20 1.3E-24 195.1 21.3 295 142-477 80-429 (430)
188 2q7w_A Aspartate aminotransfer 99.8 5.4E-21 1.9E-25 198.4 14.2 329 103-476 27-395 (396)
189 2oat_A Ornithine aminotransfer 99.8 3.6E-19 1.2E-23 188.2 28.0 322 104-478 78-437 (439)
190 4adb_A Succinylornithine trans 99.8 2.8E-19 9.5E-24 186.1 26.1 319 114-480 56-400 (406)
191 1z7d_A Ornithine aminotransfer 99.8 4E-19 1.4E-23 187.5 27.1 312 114-479 82-428 (433)
192 2oqx_A Tryptophanase; lyase, p 99.8 5.3E-20 1.8E-24 195.5 19.9 327 116-479 53-441 (467)
193 1cs1_A CGS, protein (cystathio 99.8 5.5E-19 1.9E-23 183.2 26.7 282 154-476 58-383 (386)
194 1s0a_A Adenosylmethionine-8-am 99.8 1.3E-18 4.6E-23 182.8 29.8 334 104-478 45-422 (429)
195 2pb2_A Acetylornithine/succiny 99.8 2.9E-19 1E-23 187.7 24.2 311 114-479 74-417 (420)
196 2ord_A Acoat, acetylornithine 99.8 1.4E-19 4.7E-24 188.2 21.2 307 114-478 57-395 (397)
197 2ay1_A Aroat, aromatic amino a 99.8 2.4E-20 8.1E-25 193.6 15.0 319 103-476 27-392 (394)
198 1ibj_A CBL, cystathionine beta 99.8 1.1E-19 3.8E-24 193.3 20.5 322 103-478 90-460 (464)
199 1sff_A 4-aminobutyrate aminotr 99.8 6.5E-19 2.2E-23 184.6 25.9 322 113-479 57-423 (426)
200 1n8p_A Cystathionine gamma-lya 99.8 1.3E-19 4.6E-24 188.8 20.4 283 154-476 61-391 (393)
201 2eo5_A 419AA long hypothetical 99.8 6E-19 2E-23 185.2 24.7 326 104-478 44-416 (419)
202 3nx3_A Acoat, acetylornithine 99.8 3.2E-18 1.1E-22 177.8 29.0 313 114-478 53-393 (395)
203 3acz_A Methionine gamma-lyase; 99.8 4.1E-19 1.4E-23 184.7 20.7 249 143-434 58-330 (389)
204 3i4j_A Aminotransferase, class 99.8 6.2E-18 2.1E-22 177.8 28.4 326 114-479 46-427 (430)
205 3dxv_A Alpha-amino-epsilon-cap 99.8 6.6E-18 2.3E-22 178.1 25.4 330 104-479 45-424 (439)
206 3a8u_X Omega-amino acid--pyruv 99.8 6.3E-18 2.2E-22 178.8 24.7 319 114-478 67-445 (449)
207 3bwn_A AT1G70560, L-tryptophan 99.8 5.1E-19 1.7E-23 184.1 15.7 280 147-478 71-385 (391)
208 3nmy_A Xometc, cystathionine g 99.8 6.9E-18 2.4E-22 176.2 23.8 216 142-396 65-289 (400)
209 2ctz_A O-acetyl-L-homoserine s 99.8 6E-18 2E-22 177.8 23.3 158 143-327 57-221 (421)
210 1zod_A DGD, 2,2-dialkylglycine 99.8 2.4E-17 8.3E-22 173.3 27.6 326 114-478 60-430 (433)
211 3n5m_A Adenosylmethionine-8-am 99.8 9E-17 3.1E-21 170.2 32.0 330 114-478 66-450 (452)
212 3tfu_A Adenosylmethionine-8-am 99.8 3.2E-17 1.1E-21 174.2 27.8 323 114-479 92-452 (457)
213 3gju_A Putative aminotransfera 99.8 2E-16 6.8E-21 168.1 32.3 330 114-480 68-456 (460)
214 3l44_A Glutamate-1-semialdehyd 99.8 1.2E-16 4.2E-21 168.1 29.8 313 114-480 72-430 (434)
215 2hox_A ALLIIN lyase 1; cystein 99.8 8.5E-19 2.9E-23 184.7 13.0 322 103-478 57-423 (427)
216 4a6r_A Omega transaminase; tra 99.8 1.2E-16 4E-21 169.8 28.1 327 114-480 67-449 (459)
217 3i5t_A Aminotransferase; pyrid 99.8 4.6E-16 1.6E-20 166.1 32.5 327 114-480 71-454 (476)
218 3bc8_A O-phosphoseryl-tRNA(SEC 99.8 3.3E-19 1.1E-23 186.5 6.8 236 144-399 94-347 (450)
219 3dod_A Adenosylmethionine-8-am 99.8 2.3E-16 8E-21 166.9 28.5 319 114-480 61-443 (448)
220 3fq8_A Glutamate-1-semialdehyd 99.8 1.7E-15 5.7E-20 159.0 34.0 317 104-478 54-425 (427)
221 3k28_A Glutamate-1-semialdehyd 99.7 2E-16 6.9E-21 166.3 26.1 321 103-478 54-425 (429)
222 2epj_A Glutamate-1-semialdehyd 99.7 1.3E-16 4.6E-21 167.8 24.6 324 104-479 58-430 (434)
223 4ffc_A 4-aminobutyrate aminotr 99.7 4.5E-16 1.6E-20 165.1 27.7 328 114-479 81-448 (453)
224 3oks_A 4-aminobutyrate transam 99.7 6.6E-16 2.2E-20 163.7 28.9 329 114-478 78-449 (451)
225 3hmu_A Aminotransferase, class 99.7 1.9E-16 6.5E-21 168.9 24.5 320 114-480 72-452 (472)
226 2cjg_A L-lysine-epsilon aminot 99.7 1.8E-16 6.1E-21 167.9 23.6 313 114-478 71-446 (449)
227 2e7u_A Glutamate-1-semialdehyd 99.7 3.7E-16 1.3E-20 163.9 24.8 320 104-476 54-423 (424)
228 4e77_A Glutamate-1-semialdehyd 99.7 3.2E-15 1.1E-19 157.0 31.3 319 103-478 54-427 (429)
229 2cy8_A D-phgat, D-phenylglycin 99.7 7.3E-16 2.5E-20 163.2 25.9 322 103-480 58-435 (453)
230 3hl2_A O-phosphoseryl-tRNA(SEC 99.7 3.6E-16 1.2E-20 161.7 19.9 313 142-481 110-462 (501)
231 1ohv_A 4-aminobutyrate aminotr 99.6 1.2E-14 4.2E-19 154.8 19.8 316 114-478 80-469 (472)
232 4ao9_A Beta-phenylalanine amin 99.5 1E-11 3.6E-16 130.8 28.7 308 114-480 104-446 (454)
233 2yky_A Beta-transaminase; tran 99.2 3.3E-15 1.1E-19 158.4 0.0 319 103-479 101-459 (465)
234 4atq_A 4-aminobutyrate transam 99.3 6.3E-09 2.2E-13 109.9 33.5 330 113-478 80-453 (456)
235 4a0g_A Adenosylmethionine-8-am 99.1 4.2E-09 1.4E-13 119.0 20.4 212 241-478 577-826 (831)
236 4e3q_A Pyruvate transaminase; 99.0 1.2E-07 4E-12 100.6 25.9 325 114-480 84-468 (473)
237 2yxb_A Coenzyme B12-dependent 45.0 19 0.00065 31.4 4.1 51 224-279 47-97 (161)
238 1xrs_B D-lysine 5,6-aminomutas 43.4 48 0.0016 31.4 6.9 59 223-286 157-222 (262)
239 1y80_A Predicted cobalamin bin 40.5 40 0.0014 30.4 5.8 59 223-286 116-178 (210)
240 1vs1_A 3-deoxy-7-phosphoheptul 37.8 46 0.0016 31.8 5.9 57 235-291 152-219 (276)
241 2ab1_A Hypothetical protein; H 37.8 66 0.0022 26.6 6.1 49 237-286 48-96 (122)
242 1vr6_A Phospho-2-dehydro-3-deo 37.0 35 0.0012 33.9 5.0 57 235-291 220-287 (350)
243 1zco_A 2-dehydro-3-deoxyphosph 33.6 54 0.0019 31.0 5.6 58 235-292 137-205 (262)
244 1ccw_A Protein (glutamate muta 30.8 33 0.0011 28.9 3.2 52 223-279 31-82 (137)
245 4gfq_A Ribosome-recycling fact 29.4 1.2E+02 0.0041 27.6 6.8 49 419-480 100-148 (209)
246 3nvt_A 3-deoxy-D-arabino-heptu 29.1 47 0.0016 33.4 4.5 57 235-291 256-323 (385)
247 1is1_A Ribosome recycling fact 27.4 1.8E+02 0.0062 25.8 7.6 50 418-480 75-124 (185)
248 3ezx_A MMCP 1, monomethylamine 26.7 60 0.0021 29.6 4.5 60 222-286 119-184 (215)
249 1dd5_A Ribosome recycling fact 26.5 1.8E+02 0.0063 25.8 7.4 49 419-480 76-124 (185)
250 1wqg_A Ribosome recycling fact 26.3 1.8E+02 0.0061 25.9 7.3 49 419-480 76-124 (185)
251 2wqp_A Polysialic acid capsule 25.1 54 0.0018 32.5 4.0 91 235-328 155-255 (349)
252 3bzy_B ESCU; auto cleavage pro 25.1 36 0.0012 26.2 2.2 20 268-287 29-48 (83)
253 3v7e_A Ribosome-associated pro 22.6 69 0.0024 24.2 3.4 44 240-285 16-59 (82)
254 4gqr_A Pancreatic alpha-amylas 22.6 32 0.0011 35.1 2.0 28 260-287 71-98 (496)
255 1ise_A Ribosome recycling fact 22.1 1.8E+02 0.0061 25.9 6.5 49 419-480 76-124 (185)
256 2i2x_B MTAC, methyltransferase 21.2 1E+02 0.0035 28.8 5.0 52 223-279 151-202 (258)
257 2lbw_A H/ACA ribonucleoprotein 20.9 2E+02 0.0068 23.4 6.2 43 240-284 25-68 (121)
258 3ghf_A Septum site-determining 20.5 1.3E+02 0.0045 24.6 4.9 46 238-283 25-78 (120)
259 3t7y_A YOP proteins translocat 20.4 50 0.0017 26.2 2.2 20 268-287 44-63 (97)
260 3igs_A N-acetylmannosamine-6-p 20.1 2.3E+02 0.0077 26.0 7.1 47 239-286 90-136 (232)
261 3q58_A N-acetylmannosamine-6-p 20.1 2.3E+02 0.0078 25.9 7.1 47 239-286 90-136 (229)
No 1
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=100.00 E-value=7.2e-101 Score=788.02 Aligned_cols=450 Identities=60% Similarity=1.014 Sum_probs=387.3
Q ss_pred chhhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 009673 77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (529)
Q Consensus 77 ~~~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~ 156 (529)
+..++.|.+.||+++++|++|..||+++|+||||||++|+.|++|++|.|+|||+|||||.|||+||+++|++|.+|++|
T Consensus 29 ~~~~~~l~~~Dpei~~~i~~E~~RQ~~~ieLIASEN~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~r 108 (490)
T 3ou5_A 29 WTGQESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRR 108 (490)
T ss_dssp CSSCCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHH
T ss_pred cccccchhhhCHHHHHHHHHHHHHHHcCceEecCCCcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHH
Confidence 33568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC
Q 009673 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (529)
Q Consensus 157 la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~ 236 (529)
++++||+++++|+|||||+||+.||++++.+|++|||+||.+++.+|||+|||+.+..+.++++|.+|++++|++|++++
T Consensus 109 ak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~ 188 (490)
T 3ou5_A 109 ALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTG 188 (490)
T ss_dssp HHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETTTT
T ss_pred HHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999877666889999999999999999999
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccc
Q 009673 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 316 (529)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l 316 (529)
.||+|++++++.++|||+||++.|.||+.+|++++++||++.|++|++|+||.+|+|+.+.+++|+++||||++||||+|
T Consensus 189 ~IDyd~~~~~A~~~kPklIi~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHKTL 268 (490)
T 3ou5_A 189 LIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTL 268 (490)
T ss_dssp EECHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSSTT
T ss_pred cccHHHHHHHHhhcCCCeEEECCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEeeCCCc---------chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 009673 317 RGPRGGMIFFKKDPV---------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA 387 (529)
Q Consensus 317 ~GprgG~i~~~~~~~---------~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~ 387 (529)
+|||||+|+++++.. ..+++.++|++++||++||+|++|.|||+++||++++.++|++|++|+++|++.|+
T Consensus 269 rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA 348 (490)
T 3ou5_A 269 RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMA 348 (490)
T ss_dssp CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHH
Confidence 999999999997420 12367889999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673 388 SRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 467 (529)
Q Consensus 388 ~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~ 467 (529)
+.|.+.|+++++++|++|++++|+++.++++..+++.|+++||.+|+|.+|+|.+++.++||||||+++|||||+++||+
T Consensus 349 ~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~ 428 (490)
T 3ou5_A 349 DALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFR 428 (490)
T ss_dssp HHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHH
T ss_pred HHHHhCCCeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999989999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 009673 468 AIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529 (529)
Q Consensus 468 ~la~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 529 (529)
+++++|.+++....++++.. .+++||+..+..+. .....+++||++|.+||++||+|||
T Consensus 429 ~IA~~I~~~l~~~~~~~~~~--~kl~~f~~~~~~~~-~~~~~i~~lr~~V~~l~~~FP~pg~ 487 (490)
T 3ou5_A 429 RVVDFIDEGVNIGLEVKSKT--AKLQDFKSFLLKDS-ETSQRLANLRQRVEQFARAFPMPGF 487 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHTC--CSHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHTTSCCSSC
T ss_pred HHHHHHHHHHHhhhhhhhhh--hhhHHHHHHHhcCc-ccHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999998888765 36789987653322 1114689999999999999999997
No 2
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=100.00 E-value=2.7e-73 Score=608.14 Aligned_cols=447 Identities=60% Similarity=1.028 Sum_probs=367.9
Q ss_pred hhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 009673 80 DYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALA 159 (529)
Q Consensus 80 ~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~ 159 (529)
++.|.+.||++++++++|..||++.|+|++|||++|++|++||.+.++++|++|||++|||+|+++++++|+++++++++
T Consensus 32 ~~~l~~~d~~~~~~~~~e~~rq~~~i~lias~n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~ 111 (490)
T 2a7v_A 32 QESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALE 111 (490)
T ss_dssp CCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHH
T ss_pred cchhhhcCHHHHHHHHHHHHHHHcCceEECCCCCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHH
Confidence 46688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCC
Q 009673 160 AFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD 239 (529)
Q Consensus 160 ~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD 239 (529)
+||+++++|+++|+++||++||.+++.++++|||+|+++++.|++|++|++....+.+.+.|..+++++++++++++.+|
T Consensus 112 l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD 191 (490)
T 2a7v_A 112 AFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLID 191 (490)
T ss_dssp HTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBC
T ss_pred HcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcC
Confidence 99999887777899999999999999999999999999999999999998754333455677777788888887789999
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCC
Q 009673 240 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGP 319 (529)
Q Consensus 240 ~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gp 319 (529)
+|+|++.+.+++||+|+++.++||+..|+++|++||++||++|++|++|++|+++.+..+.+++++|++++|+||+|+||
T Consensus 192 ~d~le~~l~~~~~klIi~~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK~l~Gp 271 (490)
T 2a7v_A 192 YNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGA 271 (490)
T ss_dssp HHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCSC
T ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCCCCEEEECCcccCccc
Confidence 99999999876899999999999999999999999999999999999999999888777777778999999999999999
Q ss_pred CCeEEEeeCCCc---------chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673 320 RGGMIFFKKDPV---------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (529)
Q Consensus 320 rgG~i~~~~~~~---------~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L 390 (529)
+||+|+++++.. ..+++.+++++..+++.+|+|+++.++|+++|++++..+++++|.+++.+|+++|++.|
T Consensus 272 ~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L 351 (490)
T 2a7v_A 272 RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADAL 351 (490)
T ss_dssp SCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 999999987410 01146778888889999999999999999999998877788999999999999999999
Q ss_pred HhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673 391 VELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 470 (529)
Q Consensus 391 ~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la 470 (529)
.+.|++++.+++++|++++++++.++++.++.+.|+++||.++++.+|++.+|+.+++||||++++|++|++++||++++
T Consensus 352 ~~~G~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~ 431 (490)
T 2a7v_A 352 LERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVV 431 (490)
T ss_dssp HHTTCEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHH
T ss_pred HHcCcEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHH
Confidence 99999998777789999999988888899999999999999999999999888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 009673 471 DFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529 (529)
Q Consensus 471 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 529 (529)
++|.+++.+..++|++. ++++||++.+++++ .....+.+||++|.+||++||+|+|
T Consensus 432 ~~i~~~l~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~ 487 (490)
T 2a7v_A 432 DFIDEGVNIGLEVKSKT--AKLQDFKSFLLKDS-ETSQRLANLRQRVEQFARAFPMPGF 487 (490)
T ss_dssp HHHHHHHHHHHHHHHHC--CSHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHTTSCCSSC
T ss_pred HHHHHHHHhhhhhhhhh--chhhHHHhhhccCh-hhHHHHHHHHHHHHHHHHhCCCCCc
Confidence 99999999999888776 56899999886543 0012588999999999999999986
No 3
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=100.00 E-value=4e-65 Score=547.68 Aligned_cols=452 Identities=61% Similarity=1.012 Sum_probs=393.1
Q ss_pred chhhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 009673 77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (529)
Q Consensus 77 ~~~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~ 156 (529)
.++++++...||++++.+.++..+|++.|+|++++|++|+.|++++.+.+.++|++|||+.+||+|++.++++|+.++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~a~e~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~ 98 (483)
T 1rv3_A 19 QMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKR 98 (483)
T ss_dssp HHTTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHH
T ss_pred HHHhhhhhhcCHHHHHHHHHHHHHhhcCeEEEcCCCCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHH
Confidence 44556788899999999999999998999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC
Q 009673 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (529)
Q Consensus 157 la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~ 236 (529)
++++||+++++|.++|+++||++||.+++.++++|||+|++++++|++|++|++..+...+.+.|..++.++++++++++
T Consensus 99 ~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~ 178 (483)
T 1rv3_A 99 ALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTG 178 (483)
T ss_dssp HHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTC
T ss_pred HHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCC
Confidence 99999999877767899999999999999999999999999999999999999877666677777767888888887789
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccc
Q 009673 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 316 (529)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l 316 (529)
.+|+|+|++++++.+||+|+++.++++...|+++|++||+++|++|++|++|+.|+++.+..++|++++|++++|+||+|
T Consensus 179 ~iD~d~le~~i~~~~tklIi~~~sn~~~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K~l 258 (483)
T 1rv3_A 179 YIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTL 258 (483)
T ss_dssp SBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSGGG
T ss_pred cCCHHHHHHHHhhcCCcEEEEeCCcCCCcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCcccC
Confidence 99999999999855999999966667778899999999999999999999999999888877777778999999999999
Q ss_pred cCCCCeEEEeeCCCc---------chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 009673 317 RGPRGGMIFFKKDPV---------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA 387 (529)
Q Consensus 317 ~GprgG~i~~~~~~~---------~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~ 387 (529)
+|||||+++++++.. ..+++.++++...+++.+|+|+.+.++++++|++++...+++++.+++.++++++.
T Consensus 259 ~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~ 338 (483)
T 1rv3_A 259 RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALS 338 (483)
T ss_dssp CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHH
Confidence 999999999998421 00024556666678888999999999999999998876788999999999999999
Q ss_pred HHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673 388 SRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 467 (529)
Q Consensus 388 ~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~ 467 (529)
+.|.+.|++++.+++++|+++++++..++++.++.+.|+++||.++++++||+..++.+++||||++.+|+||++++|++
T Consensus 339 ~~L~~~g~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~ 418 (483)
T 1rv3_A 339 AALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQ 418 (483)
T ss_dssp HHHHHTTCEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHH
T ss_pred HHHHhcCCEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHH
Confidence 99999999998876678889999977677888899999999999998878887656678899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-ccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 009673 468 AIADFIHEGVEITLEAKKLVQ-GSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529 (529)
Q Consensus 468 ~la~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 529 (529)
+++++|.+++....+++.... .+++++|++.++++. ...+.++++|++|.+||++||+|+|
T Consensus 419 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (483)
T 1rv3_A 419 KVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGDE-KHQRAVRALRQEVESFAALFPLPGL 480 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHSCH-HHHHHHHHHHHHHHHHHTTSCCCSS
T ss_pred HHHHHHHHHHHhccchhccccccchhhHHHHhhcccc-chhHHHHHHHHHHHHHHHhCCCCCc
Confidence 999999999987555554332 237899999886442 0012688999999999999999986
No 4
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.9e-52 Score=441.77 Aligned_cols=408 Identities=49% Similarity=0.791 Sum_probs=346.7
Q ss_pred hhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 009673 80 DYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALA 159 (529)
Q Consensus 80 ~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~ 159 (529)
...+...+|++++.+.++..++.+.|+|++++|++++.|++++.+.+.++|.+||++.|||.|++..+.+|+++++++++
T Consensus 23 ~~~l~~~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~ 102 (447)
T 3h7f_A 23 SAPLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKA 102 (447)
T ss_dssp GCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHhCceeEecCCCCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHH
Confidence 45678889999999998888888999999999999999999999999889999999999999999999999888899999
Q ss_pred HcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCC
Q 009673 160 AFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD 239 (529)
Q Consensus 160 ~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD 239 (529)
++|++. ++|+++||++|+..++.++++|||+|+++++.|++|+++++ .+...|..+..++++++++++.+|
T Consensus 103 ~~g~~~----~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d 173 (447)
T 3h7f_A 103 LFGAEF----ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGM-----RLNFSGKLYENGFYGVDPATHLID 173 (447)
T ss_dssp HHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHSSEEEEECCCTTTCSCC
T ss_pred HcCCCc----eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhh-----hhhhcCCeeEEEEcCcCcccCCcC
Confidence 999986 46667999999999999999999999999999988777664 233445556778888876778999
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCC
Q 009673 240 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGP 319 (529)
Q Consensus 240 ~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gp 319 (529)
+++|++.+...++++|+++.++||+..++++|+++|++||++||+|++|+.|++..+..+.+++++|++++|+||+|+||
T Consensus 174 ~~~l~~~i~~~~~~~i~~~~~~~~~~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK~l~G~ 253 (447)
T 3h7f_A 174 MDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGG 253 (447)
T ss_dssp HHHHHHHHHHHCCSEEEEECSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSGGGCCC
T ss_pred HHHHHHHHHhcCCeEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCcCCCCC
Confidence 99999999766899999988999988899999999999999999999999988776666666668899999999999999
Q ss_pred CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-----C
Q 009673 320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-----G 394 (529)
Q Consensus 320 rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-----G 394 (529)
+||++++++ ++.+.++...+++.+++++...++++++++......+++++.+++.++++++.+.|.+. |
T Consensus 254 ~gG~i~~~~------~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g 327 (447)
T 3h7f_A 254 RSGLIVGKQ------QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAG 327 (447)
T ss_dssp SCEEEEECG------GGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTT
T ss_pred CeEEEEECH------HHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Confidence 999999988 67777777667888888888888888888887766677899999999999999999887 9
Q ss_pred cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673 395 YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473 (529)
Q Consensus 395 ~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i 473 (529)
++++.+++++++++++++..+++...+.+.|+++||.++.+.+|++. ++..++++|||++.++++|++++|+++++++|
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l 407 (447)
T 3h7f_A 328 VSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADII 407 (447)
T ss_dssp CEEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHH
T ss_pred eEEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHH
Confidence 99887556778889999877778888999999999999987788864 56778899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCC
Q 009673 474 HEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIP 527 (529)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~ 527 (529)
.+++... ++. ++++|+++|.+|+++||++
T Consensus 408 ~~~l~~~--------------------~~~-----~~~~~~~~v~~~~~~~~~~ 436 (447)
T 3h7f_A 408 ATALATG--------------------SSV-----DVSALKDRATRLARAFPLY 436 (447)
T ss_dssp HHHHHSG--------------------GGC-----CHHHHHHHHHHHHHHSCSS
T ss_pred HHHHhcc--------------------Cch-----hHHHHHHHHHHHHHhCCCC
Confidence 9988632 012 2789999999999999994
No 5
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=100.00 E-value=2.1e-48 Score=408.07 Aligned_cols=409 Identities=46% Similarity=0.768 Sum_probs=341.2
Q ss_pred hhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673 81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (529)
Q Consensus 81 ~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~ 160 (529)
..+...++++++.+.+|..++.+.|+|++++|++++.|++++...+.+.|.+||++.++|.+....+++++.++++++++
T Consensus 4 ~~~~~~~~~i~~~~~~e~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 83 (417)
T 3n0l_A 4 MSLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKL 83 (417)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHH
T ss_pred cchhhcCHHHHHHHHHHHHHHhcCeeeecccCCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHH
Confidence 34778999999999888888888999999999999999999999998889889999999999999999999899999999
Q ss_pred cCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCH
Q 009673 161 FNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240 (529)
Q Consensus 161 ~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~ 240 (529)
+|++++ +|.+++|++|+..++.++++|||+|+++++.|.++..++. .+...|..+.+++++++ +++.+|+
T Consensus 84 ~g~~~~----~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~-~~~~~d~ 153 (417)
T 3n0l_A 84 FNCKFA----NVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGA-----KVSSSGKMYESCFYGVE-LDGRIDY 153 (417)
T ss_dssp HTCSEE----ECCCSSHHHHHHHHHHHHSCTTCEEEEECC---------------------CCSEEEEECCC-TTSSCCH
T ss_pred hCCCCc----ceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhh-----hhhhhcceeeeEeccCC-CCCCcCH
Confidence 999763 5777999999999999999999999999999988766553 23344555677788777 6788999
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCC
Q 009673 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPR 320 (529)
Q Consensus 241 d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gpr 320 (529)
++|++.+++.++++|+++.++|+...|+++|.++|++||++||+|++|+.|..+.+..+.++.++|++++|+||+|+|||
T Consensus 154 ~~l~~~i~~~~~~~v~~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~ 233 (417)
T 3n0l_A 154 EKVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPR 233 (417)
T ss_dssp HHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCS
T ss_pred HHHHHHHHhcCCeEEEECCcccCccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCC
Confidence 99999998558999999888888889999999999999999999999998888766655555678999999999999999
Q ss_pred CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC
Q 009673 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG 400 (529)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~ 400 (529)
||+++++++ ++.+.+....+++..++++...+++++.++......+++++.+++.++++++.+.|.+.|+.+..+
T Consensus 234 ~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 308 (417)
T 3n0l_A 234 GGIIMTNDE-----ELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRKFKLVSD 308 (417)
T ss_dssp CEEEEESCH-----HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGG
T ss_pred eeEEEECCH-----HHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCceeccC
Confidence 999999843 677777766667777888888888888888776556778999999999999999999999998775
Q ss_pred CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 401 GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 401 gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
+...+++++++...+++...+.+.|+++||.++....|+.. +++.++++|+|++.+++++++++|++++++.|++++..
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 388 (417)
T 3n0l_A 309 GTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDD 388 (417)
T ss_dssp SCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 55677888888777778888999999999999877777664 46667899999999999999999999999999998863
Q ss_pred HHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCC
Q 009673 480 TLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 528 (529)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~ 528 (529)
. + +. ..+++++++|.+|+++||+|+
T Consensus 389 ~-------------------~-~~----~~~~~~~~~v~~~~~~~~~~~ 413 (417)
T 3n0l_A 389 V-------------------N-NE----KLQENIKQELKKLASNFIIYE 413 (417)
T ss_dssp T-------------------T-CH----HHHHHHHHHHHHHHTTCCCCS
T ss_pred c-------------------c-ch----hhHHHHHHHHHHHHhcCCCcc
Confidence 2 1 11 368899999999999999975
No 6
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=100.00 E-value=3.7e-46 Score=391.10 Aligned_cols=409 Identities=48% Similarity=0.788 Sum_probs=318.9
Q ss_pred cccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC
Q 009673 83 LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 162 (529)
Q Consensus 83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g 162 (529)
+...++++++++.++..++.+.+.+++++|++++.|++++...+.+.|..|+++.++|.+..+.+.+++.+++++++++|
T Consensus 11 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 90 (420)
T 3gbx_A 11 IADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG 90 (420)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT
T ss_pred hhhcCHHHHHHHHHHHHhhhcceeeeccCCCCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC
Confidence 67889999999988888888899999999999999999999998888888999988888888788888888899999999
Q ss_pred CCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHH
Q 009673 163 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM 242 (529)
Q Consensus 163 ~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~ 242 (529)
++++ +|.+++|++|+..++.++++|||+|++.++.|++++.++. .+...|..+..++++++ +++.+|+++
T Consensus 91 ~~~~----~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~-~~~~~d~~~ 160 (420)
T 3gbx_A 91 ADYA----NVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGS-----PVNFSGKLYNIVPYGID-ESGKIDYDE 160 (420)
T ss_dssp CSEE----ECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC-----------------CHHHHSEEEEEEEC-TTCSCCHHH
T ss_pred CCCc----eeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccch-----hhhhcccceeEEeccCC-ccCCcCHHH
Confidence 9763 5667999999999999999999999999999988765553 22344555566777776 568899999
Q ss_pred HHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCe
Q 009673 243 LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322 (529)
Q Consensus 243 le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG 322 (529)
|++++++.++++|+++.|++|+..|+++|+++|++||++||+|++|+.|....+..+..+..+|++++|+||+++||+||
T Consensus 161 l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gg 240 (420)
T 3gbx_A 161 MAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGG 240 (420)
T ss_dssp HHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSGGGCSCSCE
T ss_pred HHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeecccCCCCCCce
Confidence 99999876799999988999998999999999999999999999998887765554555556899999999999999999
Q ss_pred EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC
Q 009673 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 402 (529)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt 402 (529)
++++++.. .++.+.++...+++.++++....+++++.++......+++++.+++.++++++.+.|.+.|++++.++.
T Consensus 241 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 317 (420)
T 3gbx_A 241 LILAKGGD---EELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGGT 317 (420)
T ss_dssp EEEESSCC---HHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSC
T ss_pred EEEEcCCc---HHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCCeeccCCC
Confidence 99998721 146666666667777778888888888878776655667888999999999999999999999876544
Q ss_pred CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHH
Q 009673 403 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITL 481 (529)
Q Consensus 403 ~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~ 481 (529)
..+++++++...+.+...+.+.|+++||.+.....|++. .++.+.++||+++..++++++++|++++++.|++++...
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~- 396 (420)
T 3gbx_A 318 ENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI- 396 (420)
T ss_dssp SSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT-
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc-
Confidence 567788887655667788999999999999876667654 456677899999989999999999999999999887632
Q ss_pred HHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCC
Q 009673 482 EAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 528 (529)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~ 528 (529)
. +. ..+++++++|.+|+++||+++
T Consensus 397 ------------------~-~~----~~~~~~~~~~~~~~~~~~~~~ 420 (420)
T 3gbx_A 397 ------------------N-DE----ATIERVKAKVLDICARFPVYA 420 (420)
T ss_dssp ------------------T-CH----HHHHHHHHHHHHHHHHSCSCC
T ss_pred ------------------c-cc----hhHHHHHHHHHHHHHhCCCCC
Confidence 1 11 368899999999999999874
No 7
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=2e-45 Score=386.07 Aligned_cols=417 Identities=49% Similarity=0.766 Sum_probs=319.5
Q ss_pred hhhhhcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 009673 78 FVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (529)
Q Consensus 78 ~~~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~l 157 (529)
++.+.+...+++++..+.++..++.+.++|++++|++++.|++++...+.+.|..|+++.++|.+..+.+.+++.+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 87 (425)
T 3ecd_A 8 FFSQSLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERV 87 (425)
T ss_dssp HHHCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHH
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHhcceeeecccCCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHH
Confidence 45677888999999998888777778899999999999999999999988888889999888888877777788888899
Q ss_pred HHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCC
Q 009673 158 LAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL 237 (529)
Q Consensus 158 a~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~ 237 (529)
++++|.+. ++|.+++|++|+..++.++++|||+|++.++.|.+++.++. .....|..++.++++++++++.
T Consensus 88 ~~~~~~~~----~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~ 158 (425)
T 3ecd_A 88 KRLFNAGH----ANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGA-----KPALSGKWFNALQYGVSRDTML 158 (425)
T ss_dssp HHHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECC-----------------------CEEEEECCCTTTSS
T ss_pred HHHhCCCC----ceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecch-----hhhhcccceeeeecCCCcccCc
Confidence 99999886 34667899999999999999999999999999877544432 2224455557778877766789
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccccccc
Q 009673 238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLR 317 (529)
Q Consensus 238 iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~ 317 (529)
+|+++|++.+++.++++|++++++||...++++|.++|++||++||+|++|+.|....+....++..+|++++|+||+|+
T Consensus 159 ~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l~ 238 (425)
T 3ecd_A 159 IDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLR 238 (425)
T ss_dssp CCHHHHHHHHHHHCCSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGC
T ss_pred cCHHHHHHHHhhcCCcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcccC
Confidence 99999999998558999999988999999999999999999999999999998877665444444468999999999999
Q ss_pred CCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEE
Q 009673 318 GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL 397 (529)
Q Consensus 318 GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v 397 (529)
|||+|+++++++ ++.+.+....+++.+++++...+++++.++......+++++.+++.++++++.+.|.+.|+++
T Consensus 239 g~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 313 (425)
T 3ecd_A 239 GPRGGFVLTNDE-----EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDL 313 (425)
T ss_dssp CCSCEEEEESCH-----HHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CCCcEEEEeCCH-----HHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 999999999863 577777666667777788888888887787766556678899999999999999999999998
Q ss_pred ecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 398 VSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 398 ~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
+.++...+++++++...+.+.+.+.+.|+++||.+.....||+. +++.++++|++++.+++++++++|++++++.|+++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~ 393 (425)
T 3ecd_A 314 VTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEV 393 (425)
T ss_dssp GGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHH
Confidence 86544567788887655667788999999999999866667754 45566889999988888899999999999999998
Q ss_pred HHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCC
Q 009673 477 VEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIP 527 (529)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~ 527 (529)
++.... ++ +.+. ..+++++++|.+||+.||+.
T Consensus 394 l~~~~~------~~---------~~~~----~~~~~~~~~~~~~~~~~~~~ 425 (425)
T 3ecd_A 394 FEALRT------NP---------EGDH----ATEQRVRREIFALCERFPIY 425 (425)
T ss_dssp HHHHHH------CT---------TCCH----HHHHHHHHHHHHHHHTSCCC
T ss_pred Hhcccc------cc---------ccCc----hhHHHHHHHHHHHHhcCCCC
Confidence 875310 10 1111 36789999999999999973
No 8
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=100.00 E-value=9.4e-41 Score=348.79 Aligned_cols=402 Identities=50% Similarity=0.809 Sum_probs=315.2
Q ss_pred ccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC
Q 009673 84 GEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL 163 (529)
Q Consensus 84 ~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~ 163 (529)
...||++++.+.++..++...|++..++|++++.|++++...+.+.+..+||+.+++.|.+..+.+|+.+++++++++|+
T Consensus 5 ~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~ 84 (407)
T 2dkj_A 5 LKRDEALFELIALEEKRQREGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGA 84 (407)
T ss_dssp -CCCHHHHHHHHHHHHHHHTSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHHHHhhcceeeccCCCCCCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCC
Confidence 45789999999998888888999999999999999999998886656667887776767776778888888899999999
Q ss_pred CCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHH
Q 009673 164 DENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDML 243 (529)
Q Consensus 164 ~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~l 243 (529)
++ .+|.+++|++|+..++.++++|||+|+++++.|++++.... .+...|..+..++++++++++.+|+++|
T Consensus 85 ~~----~~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d~~~l 155 (407)
T 2dkj_A 85 AW----ANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHGS-----RVNFSGKLYKVVSYGVRPDTELIDLEEV 155 (407)
T ss_dssp SE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHHSEEEEECCCTTTSSCCHHHH
T ss_pred Cc----ceEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchHH-----HHHhcCceEEEEecCCCcccCccCHHHH
Confidence 85 35667999999999999999999999999998876542111 2334455446667666655688999999
Q ss_pred HHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeE
Q 009673 244 EKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGM 323 (529)
Q Consensus 244 e~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~ 323 (529)
++.+++.++++|+++.|+||...|+++|.++|++||+++|+|++|..|+...+....++...|++++|+||+++|+++|+
T Consensus 156 ~~~l~~~~~~~v~~~~p~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~ 235 (407)
T 2dkj_A 156 RRLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGL 235 (407)
T ss_dssp HHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSCEE
T ss_pred HHHHhhcCCeEEEEeccccCCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCceE
Confidence 99998558999999888899888999999999999999999999988776555433334457999999999999999999
Q ss_pred EEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCC
Q 009673 324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 403 (529)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~ 403 (529)
++++++ ++.+.+.....++..++++...++++..+++.....++++..+++.++++++.+.|++.|++++.+...
T Consensus 236 ~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 310 (407)
T 2dkj_A 236 ILSNDP-----ELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTGGTD 310 (407)
T ss_dssp EEESCH-----HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCS
T ss_pred EEECCH-----HHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCceeecCCCC
Confidence 999832 677777655455556777777776777778765455668889999999999999999889988753234
Q ss_pred CceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHHH
Q 009673 404 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE 482 (529)
Q Consensus 404 ~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~~ 482 (529)
.+++++++...+.+...+.+.|.++||.+..+..|.+. ++..++++||+++.+|+.+.+++|++++++.|+++++.
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~--- 387 (407)
T 2dkj_A 311 NHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE--- 387 (407)
T ss_dssp SSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH---
T ss_pred ceEEEEECcccCCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc---
Confidence 56778777543456778888899999999765433221 22346789999876555567789999999999887652
Q ss_pred HHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCC
Q 009673 483 AKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIP 527 (529)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~ 527 (529)
++ .+.++++|.+|..+||++
T Consensus 388 -------------------~~------~~~~~~~~~~~~~~~~~~ 407 (407)
T 2dkj_A 388 -------------------GP------SEALREEVRRLALAHPMP 407 (407)
T ss_dssp -------------------CC------CHHHHHHHHHHHHTSCCC
T ss_pred -------------------Cc------hHHHHHHHHHHHHhcCCC
Confidence 01 246888999999999975
No 9
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=100.00 E-value=2.7e-40 Score=345.05 Aligned_cols=401 Identities=50% Similarity=0.822 Sum_probs=312.7
Q ss_pred hcccCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc
Q 009673 82 SLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF 161 (529)
Q Consensus 82 ~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~ 161 (529)
.+.++||+++..+..+..++.+.+.+.+++++.++.|++++...+.++|..||++.+++.|.....++++.+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~ 82 (405)
T 2vi8_A 3 YLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF 82 (405)
T ss_dssp SHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhhCHHHHHHHHHHHHHhhcceeeccCcccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh
Confidence 35667899999998887777777888889999999999999988876777788888878777777889888889999999
Q ss_pred CCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHH
Q 009673 162 NLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYD 241 (529)
Q Consensus 162 g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d 241 (529)
|+++ .+|.+++|++|+..++.++++|||+|+++++.|+++...+. .+...|..+++++++++++++.+|++
T Consensus 83 g~~~----~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d~~ 153 (405)
T 2vi8_A 83 GAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGS-----PVNFSGVQYNFVAYGVDPETHVIDYD 153 (405)
T ss_dssp TCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTC-----TTSHHHHHSEEEEECBCTTTCSBCHH
T ss_pred CCCc----eEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhcccc-----hhhhccceeEEEecccccccCCcCHH
Confidence 9985 34667899999999999999999999999988766543221 12234443467777776556889999
Q ss_pred HHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC
Q 009673 242 MLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG 321 (529)
Q Consensus 242 ~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg 321 (529)
+|++.+++.++++|+++.++++...++++|.++|++||++||+|++|..|....+....++.+.|++++|+||++.||.|
T Consensus 154 ~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~g 233 (405)
T 2vi8_A 154 DVREKARLHRPKLIVAAAAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRG 233 (405)
T ss_dssp HHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSC
T ss_pred HHHHHHHhcCCeEEEEeCCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCC
Confidence 99999986589999987677776779999999999999999999998876654443333334689999999999988889
Q ss_pred eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCC
Q 009673 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG 401 (529)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~g 401 (529)
|++++++ ++.+.+.....++..++++...++++..+++.....++++..+++.++++++.+.|++.|++++.+.
T Consensus 234 G~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 307 (405)
T 2vi8_A 234 GMILCQE------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGG 307 (405)
T ss_dssp EEEEECH------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS
T ss_pred eEEEEcH------HHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeEecCC
Confidence 9999986 6777666554455667778888888777887665556688899999999999999998899887643
Q ss_pred CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 402 SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 402 t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
...+++++++...+.+...+.+.|.++||.+..+..|.+. ++..++++||+++.++++.++++|++++++.|++++...
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~ 387 (405)
T 2vi8_A 308 TDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNV 387 (405)
T ss_dssp CSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCT
T ss_pred CCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhcc
Confidence 3456778877644556778888899999999765433222 233457899998876666788999999999998876421
Q ss_pred HHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHH
Q 009673 481 LEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALT 521 (529)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 521 (529)
.+ + .+++.+|++|.+|+
T Consensus 388 -------------------~~-~----~~~~~~~~~~~~~~ 404 (405)
T 2vi8_A 388 -------------------GS-E----QALEEARQRVAALT 404 (405)
T ss_dssp -------------------TC-H----HHHHHHHHHHHHHH
T ss_pred -------------------cc-c----ccHHHHHHHHHHhh
Confidence 11 1 24778999999886
No 10
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.96 E-value=5.8e-28 Score=249.26 Aligned_cols=332 Identities=16% Similarity=0.102 Sum_probs=235.0
Q ss_pred eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 009673 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (529)
Q Consensus 105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~ 184 (529)
+.+.++..++++.|++++...+.+.+ + ....++...+++++++++|++.+. ...+..++|++|+. +
T Consensus 4 ~~~~~gp~~~~~~v~~a~~~~~~~~~-----------~-~~~~~~~~~~~~~la~~~~~~~~~-~~v~~~~g~t~al~-~ 69 (384)
T 3zrp_A 4 LLLHVGPTTIKEDVLVAGLENNVGFT-----------S-KEFVEALAYSLKGLRYVMGASKNY-QPLIIPGGGTSAME-S 69 (384)
T ss_dssp --CCSSCSCCCHHHHHHTTCCSCCTT-----------S-HHHHHHHHHHHHHHHHHHTCCTTS-EEEEEESCHHHHHH-H
T ss_pred eeccCCCCCCCHHHHHHhhccccccc-----------c-HHHHHHHHHHHHHHHHHhCCCCCC-cEEEEcCCcHHHHH-H
Confidence 45677788899999999987653221 1 112334445668999999998621 01233455569999 9
Q ss_pred HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC
Q 009673 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 264 (529)
Q Consensus 185 l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~ 264 (529)
+.++++|||+|+++++.|.+. .+. ..+...|. +++.++++ +++.+|+++|++.+++.++++|++++++||+
T Consensus 70 ~~~~~~~gd~vi~~~~~~~~~---~~~---~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~npt 140 (384)
T 3zrp_A 70 VTSLLKPNDKILVVSNGVFGD---RWE---QIFKRYPV--NVKVLRPS-PGDYVKPGEVEEEVRKSEYKLVALTHVETST 140 (384)
T ss_dssp GGGGCCTTCEEEEECSSHHHH---HHH---HHHTTSSC--EEEEECCS-TTCCCCHHHHHHHHHHSCEEEEEEESEETTT
T ss_pred HHhhcCCCCEEEEecCCcchH---HHH---HHHHHcCC--cEEEecCC-CCCCCCHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 999999999999998765331 110 11233454 66777776 3678999999999988679999998887776
Q ss_pred --CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh-
Q 009673 265 --DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI- 340 (529)
Q Consensus 265 --~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i- 340 (529)
..|+++|.++|++||+++|+|++|..|....+... .++|++++|+||++.|+.| |++++++ ++.+++
T Consensus 141 G~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~d~~~~s~~K~~~~~~g~g~~~~~~------~~~~~~~ 211 (384)
T 3zrp_A 141 GVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEE---WNVDVYLTASQKALGSAAGLGLLLLSP------KALSILD 211 (384)
T ss_dssp TEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTT---TTCSEEEEETTSTTCCCSSEEEEEECH------HHHHHHH
T ss_pred ceECcHHHHHHHHHhcCCEEEEECcccccCccccccc---cCCCEEEecCcccccCCCceEEEEECH------HHHHHhc
Confidence 78999999999999999999999886654322111 1579999999999977666 9999987 554444
Q ss_pred cc------------cc---------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec
Q 009673 341 NN------------AV---------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (529)
Q Consensus 341 ~~------------~~---------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~ 399 (529)
.. .. .....|+++...++++..+++.....++++..+++.++++++.+.|++.|+++..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 291 (384)
T 3zrp_A 212 SQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALGLEIVA 291 (384)
T ss_dssp HCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSC
T ss_pred CCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCeEcc
Confidence 10 00 1111257777788888778876654456888899999999999999988888765
Q ss_pred CC---CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 400 GG---SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 400 ~g---t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
+. ...+++++.+.. .+..++.+.|.+.||.+..+ ...+. +.+||++... .+++|++++++.|+++
T Consensus 292 ~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g----~~~~~--~~iRi~~~~~----~~~e~i~~~~~~l~~~ 359 (384)
T 3zrp_A 292 RRPESYSNTVTGVILKV--ADPQKVLAGTVNEGVEFAPG----VHPAF--KYFRIGHMGW----VTPNDAIIAISVIERT 359 (384)
T ss_dssp SSGGGBCSSEEEEECSS--SCHHHHHHHHHTTTCCCEEC----CCTTC--CEEEEECCSS----CCHHHHHHHHHHHHHH
T ss_pred CcccccCccEEEEECCC--CCHHHHHHHHHHCCEEEecC----CCCCc--CEEEEecccc----CCHHHHHHHHHHHHHH
Confidence 42 123455566543 56788888888889998643 21111 7899997654 3589999999999998
Q ss_pred HHHH
Q 009673 477 VEIT 480 (529)
Q Consensus 477 ~~~~ 480 (529)
+...
T Consensus 360 l~~~ 363 (384)
T 3zrp_A 360 LRKL 363 (384)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 8743
No 11
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.96 E-value=1.7e-27 Score=248.50 Aligned_cols=335 Identities=15% Similarity=0.122 Sum_probs=238.1
Q ss_pred ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (529)
Q Consensus 104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~ 183 (529)
.+.+.+++..+++.|++++...+...+ ...+. .+...+++++++++|.+.++. .+...+|++|+..
T Consensus 14 ~~~~~pgp~~~~~~v~~a~~~~~~~~~-----------~~~~~-~~~~~~~~~la~~~~~~~~~~--v~~~~sgt~al~~ 79 (411)
T 3nnk_A 14 RLLMGPGPINADPRVLRAMSSQLIGQY-----------DPAMT-HYMNEVMALYRGVFRTENRWT--MLVDGTSRAGIEA 79 (411)
T ss_dssp CEEESSSCCCCCHHHHHHHTSCCCCTT-----------CHHHH-HHHHHHHHHHHHHHTCCCSEE--EEEESCHHHHHHH
T ss_pred ceeecCCCCCCCHHHHHHhhccccccc-----------cHHHH-HHHHHHHHHHHHHhCCCCCcE--EEECCCcHHHHHH
Confidence 366777778899999999986542211 11222 333455689999999986531 2344567899999
Q ss_pred HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (529)
Q Consensus 184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p 263 (529)
++.++++|||+|++.++.|.+.. + ...+...|. +++.++++ +++.+|+|+|++.+++.++++|++++++||
T Consensus 80 ~~~~~~~~gd~Vl~~~~~~~~~~---~---~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~np 150 (411)
T 3nnk_A 80 ILVSAIRPGDKVLVPVFGRFGHL---L---CEIARRCRA--EVHTIEVP-WGEVFTPDQVEDAVKRIRPRLLLTVQGDTS 150 (411)
T ss_dssp HHHHHCCTTCEEEEEECSHHHHH---H---HHHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred HHHHhcCCCCEEEEecCCchHHH---H---HHHHHHcCC--eEEEEecC-CCCCCCHHHHHHHHhhCCCeEEEEeCCCCC
Confidence 99999999999999998664321 1 112234454 66666665 467899999999998668999999987777
Q ss_pred C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673 264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 340 (529)
Q Consensus 264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i 340 (529)
+ ..|+++|.++|++||+++|+|++|..|....+... .++|++++|+||++.|+.| |++++++ ++.+++
T Consensus 151 tG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~---~~~d~~~~s~~K~l~~~~g~g~~~~~~------~~~~~~ 221 (411)
T 3nnk_A 151 TTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDV---WGLDAVSAGMQKCLGGPSGTSPITLSA------RMEEAI 221 (411)
T ss_dssp TTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTT---TTCSEEECCSTTTTCCCSSEEEEEECH------HHHHHH
T ss_pred cceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhc---cCCcEEEecCccccCCCCceEEEEECH------HHHHHH
Confidence 6 77899999999999999999999877654322111 1589999999999877777 9999987 565554
Q ss_pred cccc-----------------------------------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 009673 341 NNAV-----------------------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (529)
Q Consensus 341 ~~~~-----------------------------------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~ 385 (529)
.... .....++++...++++..+++.....++++..+++.+++++
T Consensus 222 ~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~ 301 (411)
T 3nnk_A 222 RRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDA 301 (411)
T ss_dssp HTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred hhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4321 01123567777888887788766544467888999999999
Q ss_pred HHHHHHhcCcEEecCCC--CCceEEEccCCCCCcHHHHHHhHhc-CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673 386 LASRLVELGYKLVSGGS--DNHLVLVDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 462 (529)
Q Consensus 386 l~~~L~~~G~~v~~~gt--~~~~~~v~~~~~~i~~~~~~~~L~~-~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~ 462 (529)
+.+.|++.|+++..+.. ..++.++.+. .+.+..++.+.|.+ +||.+..+.. +...+.|||++...+ .+
T Consensus 302 l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~gi~v~~g~~-----~~~~~~iRi~~~~~~---~~ 372 (411)
T 3nnk_A 302 LVKGIQAMGLETFGDLKHKMNNVLGVVIP-QGINGDQARKLMLEDFGIEIGTSFG-----PLHGKVWRIGTMGYN---AR 372 (411)
T ss_dssp HHHHHHHTTCCBCSCGGGBCSSEEEEECC-TTCCHHHHHHHHHHHHSEEEEECCG-----GGTTTEEEEECCGGG---CS
T ss_pred HHHHHHHcCCEeCCCcccccccEEEEECC-CCCCHHHHHHHHHHhcCeEEeCccC-----CCCCCEEEEeCccCc---CC
Confidence 99999998888765321 2344555553 35677777777654 5999965421 223578999962222 24
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009673 463 EKEFVAIADFIHEGVEI 479 (529)
Q Consensus 463 ~~d~~~la~~i~~~~~~ 479 (529)
++|++++++.|+++++.
T Consensus 373 ~~~i~~~~~~l~~~l~~ 389 (411)
T 3nnk_A 373 KDCVMTTLSALEAVLNY 389 (411)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999999998864
No 12
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.96 E-value=1.7e-27 Score=248.86 Aligned_cols=335 Identities=13% Similarity=0.099 Sum_probs=237.5
Q ss_pred ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (529)
Q Consensus 104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~ 183 (529)
.+.+.++...+++++++++.......| . ....++...+++++++++|++.+. +.+...+|++|+..
T Consensus 12 ~~~~~p~p~~~~~~v~~a~~~~~~~~~----------~--~~~~~~~~~l~~~la~~~g~~~~~--~~~~~~s~t~al~~ 77 (416)
T 3isl_A 12 RTIMTPGPVEVDPRVLRVMSTPVVGQF----------D--PAFTGIMNETMEMLRELFQTKNRW--AYPIDGTSRAGIEA 77 (416)
T ss_dssp CEECSSSSCCCCHHHHHHTTSCCCCTT----------S--HHHHHHHHHHHHHHHHHTTCCCSE--EEEEESCHHHHHHH
T ss_pred ceeecCCCcCcCHHHHHHhcccCCCCc----------c--HHHHHHHHHHHHHHHHHhCCCCCc--EEEecCcHHHHHHH
Confidence 456777777789999999875321111 1 112344445668999999998752 22245677799999
Q ss_pred HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (529)
Q Consensus 184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p 263 (529)
++.++++|||+|+++++.|.++. + ...+...|. +++.++++ +++.+|+++|++++++.++++|++++++||
T Consensus 78 ~~~~l~~~gd~Vl~~~~~~~~~~---~---~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~np 148 (416)
T 3isl_A 78 VLASVIEPEDDVLIPIYGRFGYL---L---TEIAERYGA--NVHMLECE-WGTVFDPEDIIREIKKVKPKIVAMVHGETS 148 (416)
T ss_dssp HHHHHCCTTCEEEEEESSHHHHH---H---HHHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred HHHHhcCCCCEEEEecCCcccHH---H---HHHHHhcCC--eeEEEecC-CCCCCCHHHHHHHHhhCCCcEEEEEccCCC
Confidence 99999999999999998654311 1 112334454 66666666 457899999999998558999999988877
Q ss_pred C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673 264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 340 (529)
Q Consensus 264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i 340 (529)
+ ..|+++|.++|++||+++|+|++|..|....+... .++|++++|+||++.|+.| |++++++ ++.+.+
T Consensus 149 tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~d~~~~s~~K~l~g~~g~g~~~~~~------~~~~~~ 219 (416)
T 3isl_A 149 TGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDE---WKIDAAIGGTQKCLSVPSGMAPITYNE------RVADVI 219 (416)
T ss_dssp TTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTT---TTCSEEECCSSSTTCCCSSEEEEEECH------HHHHHH
T ss_pred CceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhh---cCCCEEEecCccccCCCCCeEEEEECH------HHHHHh
Confidence 6 77899999999999999999999887654322111 1589999999999878777 9999887 555544
Q ss_pred ccc-------------------------------------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673 341 NNA-------------------------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (529)
Q Consensus 341 ~~~-------------------------------------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a 383 (529)
... ......++++...++++..+++.....++++..+++.+++
T Consensus 220 ~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~ 299 (416)
T 3isl_A 220 AARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHE 299 (416)
T ss_dssp HTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred hccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 321 1111245677778888877887665444788899999999
Q ss_pred HHHHHHHHhcCcEEecCCC--CCceEEEccCCCCCcHHHHHHhHhc-CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCC
Q 009673 384 RALASRLVELGYKLVSGGS--DNHLVLVDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG 460 (529)
Q Consensus 384 ~~l~~~L~~~G~~v~~~gt--~~~~~~v~~~~~~i~~~~~~~~L~~-~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g 460 (529)
+++.+.|.+.|+++..+.. ..+++++.+. .+.+..++.+.|.+ +||.+..+. .+..++.+||+++...+
T Consensus 300 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~~gi~v~~g~-----~~~~~~~iRi~~~~~~~-- 371 (416)
T 3isl_A 300 AALAAGIKAMGLRLFGDDSCKMPVVTCVEIP-GGIDGESVRDMLLAQFGIEIASSF-----GPLAGKIWRIGTMGYSC-- 371 (416)
T ss_dssp HHHHHHHHHTTCCBCSCGGGBCTTEEEEECC-TTCCHHHHHHHHHHHHCEECBCCC-----STTTTTEEEEECCGGGC--
T ss_pred HHHHHHHHHcCCEeccCccccCCcEEEEeCC-CCCCHHHHHHHHHHhCCEEEecCC-----CCCCCCEEEEecccCCC--
Confidence 9999999998888775421 1244555553 35577788777755 599996432 12346789999855443
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 009673 461 FSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 461 ~~~~d~~~la~~i~~~~~~ 479 (529)
.+++++++++.|++++..
T Consensus 372 -~~e~i~~~~~~l~~~~~~ 389 (416)
T 3isl_A 372 -RKENVLFVLAGLEAVLLR 389 (416)
T ss_dssp -SHHHHHHHHHHHHHHHHH
T ss_pred -cHHHHHHHHHHHHHHHHH
Confidence 244499999999998864
No 13
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.96 E-value=8.9e-28 Score=245.10 Aligned_cols=324 Identities=13% Similarity=0.038 Sum_probs=231.0
Q ss_pred eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 009673 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (529)
Q Consensus 105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~ 184 (529)
+.+.++..++++.|++++...+... +++ .. .......++++++++|+++++ .+...+|++|+..+
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~~~~~~--------~~~---~~-~~~~~~l~~~la~~~g~~~~~---i~~~~g~t~a~~~~ 67 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALARPQLHH--------RTE---AA-REVFLKARGLLREAFRTEGEV---LILTGSGTLAMEAL 67 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHSCCCCT--------TSH---HH-HHHHHHHHHHHHHHHTCSSEE---EEEESCHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHhccCCCCc--------cCH---HH-HHHHHHHHHHHHHHhCCCCce---EEEcCchHHHHHHH
Confidence 5677888889999999998766321 111 11 222234568899999997532 23344566999999
Q ss_pred HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC
Q 009673 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 264 (529)
Q Consensus 185 l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~ 264 (529)
+.++++|||+|+++++.|.++. .. ..+...|. +++.++++ +++.+|+++|++ + ++++|++++++||+
T Consensus 68 ~~~~~~~gd~vl~~~~~~~~~~-~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~---~-~~~~v~~~~~~npt 134 (352)
T 1iug_A 68 VKNLFAPGERVLVPVYGKFSER-FY-----EIALEAGL--VVERLDYP-YGDTPRPEDVAK---E-GYAGLLLVHSETST 134 (352)
T ss_dssp HHHHCCTTCEEEEEECSHHHHH-HH-----HHHHHTTC--EEEEEECC-TTCCCCTTTSCC---S-SCSEEEEESEETTT
T ss_pred HHhccCCCCeEEEEeCCchhHH-HH-----HHHHHcCC--ceEEEeCC-CCCCCCHHHHhc---c-CCcEEEEEEecCCc
Confidence 9999999999999998765532 00 01122354 66666665 356789988876 3 79999999888876
Q ss_pred --CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHH
Q 009673 265 --DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (529)
Q Consensus 265 --~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~ 337 (529)
..|+++|.++|+++ |+++|+|++|..|....+ +. ++|++++|+||++.||.| |++++++ ++.
T Consensus 135 G~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~-----~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~------~~~ 203 (352)
T 1iug_A 135 GALADLPALARAFKEKNPEGLVGADMVTSLLVGEVA-----LEAMGVDAAASGSQKGLMCPPGLGFVALSP------RAL 203 (352)
T ss_dssp TEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCC-----SGGGTCSEEEEESSSTTCCCSCEEEEEECH------HHH
T ss_pred ceecCHHHHHHHHHhhCCCCEEEEECCccccCccee-----ccccCeeEEEecCcccccCCCceeEEEECH------HHH
Confidence 78999999999999 999999999876643221 22 479999999999888877 9999987 443
Q ss_pred hhh---------c----ccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCC
Q 009673 338 SAI---------N----NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 404 (529)
Q Consensus 338 ~~i---------~----~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~ 404 (529)
+++ . ........++++...++++..+++.... .+++..+++.++++++.+.|++.|+++..+....
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 282 (352)
T 1iug_A 204 ERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLP-RLEEHLALKAWQNALLYGVGEEGGLRPVPKRFSP 282 (352)
T ss_dssp HTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGG-GHHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCT
T ss_pred HHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCcccccccCC
Confidence 331 1 0001122456677777777778876543 3778889999999999999988888876542134
Q ss_pred ceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 405 HLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 405 ~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+++++.+. .+.+..++.+.|.+.||.+..+. .+..++++||++...+ +++|++++++.|+++++
T Consensus 283 ~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~~~-----~~~~~~~iRi~~~~~~----~~~~i~~~~~~l~~~~~ 346 (352)
T 1iug_A 283 AVAAFYLP-EGVPYARVKEAFAQRGAVIAGGQ-----GPLKGKVFRLSLMGAY----DRYEALGVAGMFREVLE 346 (352)
T ss_dssp TCEEEECC-TTCCHHHHHHHHHTTTEECEECC-----GGGTTTEEEECCCSSC----CHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcC-CCCCHHHHHHHHHHCCEEEEeCC-----CccCCCEEEEEccccC----CHHHHHHHHHHHHHHHH
Confidence 56677664 25577788888888899986533 1223578999987543 48999999999998875
No 14
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.96 E-value=2.6e-27 Score=245.68 Aligned_cols=334 Identities=12% Similarity=0.095 Sum_probs=236.1
Q ss_pred ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceee-ecCChHHHHH
Q 009673 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNV-QPLSGSPANF 182 (529)
Q Consensus 104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V-~~~sGs~A~~ 182 (529)
.+.+.+++..+++.|++++...+...| ....+.....+++++++++|++++. +| ..++|++|+.
T Consensus 20 ~~~~~~g~~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~g~~~~~---~i~~~~g~t~a~~ 84 (393)
T 2huf_A 20 KLLMGPGPSNAPQRVLDAMSRPILGHL------------HPETLKIMDDIKEGVRYLFQTNNIA---TFCLSASGHGGME 84 (393)
T ss_dssp CEECSSSCCCCCHHHHHHTTSCCCCTT------------SHHHHHHHHHHHHHHHHHHTCCCSE---EEEESSCHHHHHH
T ss_pred eEEecCCCCCCCHHHHHHHHhhhccCC------------CHHHHHHHHHHHHHHHHHhCCCCCc---EEEEcCcHHHHHH
Confidence 466667777789999999987654322 1122334445668999999997641 34 3455669999
Q ss_pred HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (529)
Q Consensus 183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~ 262 (529)
.++.++++|||+|+++++.|.++. + ...+...|. +++.++++ +++.+|+++|++.+++.++++|++++++|
T Consensus 85 ~~~~~~~~~gd~vl~~~~~~~~~~---~---~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~n 155 (393)
T 2huf_A 85 ATLCNLLEDGDVILIGHTGHWGDR---S---ADMATRYGA--DVRVVKSK-VGQSLSLDEIRDALLIHKPSVLFLTQGDS 155 (393)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHHH---H---HHHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHHHhCCCCEEEEECCCcchHH---H---HHHHHHcCC--eeEEEeCC-CCCCCCHHHHHHHHhccCCcEEEEEccCC
Confidence 999999999999999998765421 1 001122354 66666666 35789999999999765799999988887
Q ss_pred CC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhh
Q 009673 263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 339 (529)
Q Consensus 263 p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~ 339 (529)
|+ ..|+++|.++|+++|+++|+|++|..|....+... .++|++++|+||++.|+.| |++++++ ++.+.
T Consensus 156 ptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~---~~~d~~~~s~sK~l~g~~G~G~~~~~~------~~~~~ 226 (393)
T 2huf_A 156 STGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDR---WEIDAMYTGSQKVLGAPPGITPVSFSH------RAVER 226 (393)
T ss_dssp TTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTT---TTCSEEECCSSSTTCCCSSCEEEEECH------HHHHH
T ss_pred CccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhh---cCccEEEECCCcccccCCCeEEEEECH------HHHHH
Confidence 76 67899999999999999999999876644222110 1579999999999888777 9999987 66665
Q ss_pred hccc---ccC-------------------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEE
Q 009673 340 INNA---VFP-------------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL 397 (529)
Q Consensus 340 i~~~---~~p-------------------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v 397 (529)
+... ..+ ...++++...++++..+++.....++++..+++.++++++.+.|.+.|+.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 306 (393)
T 2huf_A 227 YKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAGFEL 306 (393)
T ss_dssp HHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCB
T ss_pred HhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCee
Confidence 5432 001 123567777888777788765433467888899999999999999888877
Q ss_pred ecCC--CCCceEEEccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673 398 VSGG--SDNHLVLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 474 (529)
Q Consensus 398 ~~~g--t~~~~~~v~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~ 474 (529)
..+. ..++++++.+. .+.+..++.+.|. ++||.+..+..+ ..++++||++...+ .+++|++++++.|+
T Consensus 307 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~~~gi~v~~g~~~-----~~~~~~Ri~~~~~~---~~~e~i~~~~~~l~ 377 (393)
T 2huf_A 307 YADPKDRLSTVTTIKVP-QGVDWLKAAQYAMKTYLVEISGGLGP-----TAGQVFRIGLMGQN---ATTERVDRVLQVFQ 377 (393)
T ss_dssp SSCGGGBCTTEEEEECC-TTCCHHHHHHHHHHHHCEECBCCCGG-----GTTTEEEEECCGGG---CSHHHHHHHHHHHH
T ss_pred ccCccccCCcEEEEEcC-CCCCHHHHHHHHHHhCCEEEecCccc-----ccCCEEEEEcccCc---CCHHHHHHHHHHHH
Confidence 6542 12335556653 3556777777775 469998543211 23578999974432 24789999999999
Q ss_pred HHHHH
Q 009673 475 EGVEI 479 (529)
Q Consensus 475 ~~~~~ 479 (529)
++++.
T Consensus 378 ~~~~~ 382 (393)
T 2huf_A 378 EAVAA 382 (393)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 15
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.96 E-value=4.9e-27 Score=242.66 Aligned_cols=327 Identities=14% Similarity=0.141 Sum_probs=233.1
Q ss_pred ecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHH
Q 009673 108 IASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYT 186 (529)
Q Consensus 108 ~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs~A~~~~l~ 186 (529)
.++...+++.|++++...+.+.| + .. ...+.+.+++++++++|++ .+ ..+...+|++|+..++.
T Consensus 25 ~~~~~~~~~~v~~a~~~~~~~~~----------~-~~-~~~~~~~~~~~la~~~g~~~~~---~v~~~~g~t~a~~~~~~ 89 (386)
T 2dr1_A 25 TAGPVACFPEVLEIMKVQMFSHR----------S-KE-YRKVHMDTVERLREFLEVEKGE---VLLVPSSGTGIMEASIR 89 (386)
T ss_dssp CSSSCCCCHHHHHHTTSCCCCTT----------S-HH-HHHHHHHHHHHHHHHHTCSSSE---EEEESSCHHHHHHHHHH
T ss_pred cCCCcCCcHHHHHHHhccccccc----------C-HH-HHHHHHHHHHHHHHHhCCCCCc---EEEEeCChHHHHHHHHH
Confidence 45566789999999986654322 1 11 2445556678999999997 32 12334556699999999
Q ss_pred hhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh-cCCcEEEEcCCCCCC-
Q 009673 187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-FRPKLIIAGASAYPR- 264 (529)
Q Consensus 187 all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~-~~pklIi~~~s~~p~- 264 (529)
++++|||+|+++++.|.++. + ...+...|. +++.++++ .++.+|+++|++.+++ .++++|++++++||+
T Consensus 90 ~l~~~gd~vl~~~~~~~~~~---~---~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG 160 (386)
T 2dr1_A 90 NGVSKGGKVLVTIIGAFGKR---Y---KEVVESNGR--KAVVLEYE-PGKAVKPEDLDDALRKNPDVEAVTITYNETSTG 160 (386)
T ss_dssp HHSCTTCEEEEEESSHHHHH---H---HHHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHCTTCCEEEEESEETTTT
T ss_pred HhhcCCCeEEEEcCCchhHH---H---HHHHHHhCC--ceEEEecC-CCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcc
Confidence 99999999999998765420 1 112234454 66677776 3578999999999953 378999998777775
Q ss_pred -CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673 265 -DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 340 (529)
Q Consensus 265 -~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i 340 (529)
..|+++|.++|++||+++|+|++|..|.... ++. ++|++++|+||++.+|.| |++++++ ++.+.+
T Consensus 161 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~-----~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~------~~~~~~ 229 (386)
T 2dr1_A 161 VLNPLPELAKVAKEHDKLVFVDAVSAMGGADI-----KFDKWGLDVVFSSSQKAFGVPPGLAIGAFSE------RFLEIA 229 (386)
T ss_dssp EECCHHHHHHHHHHTTCEEEEECTTTBTTBCC-----CTTTTTCSEEEEETTSTTCCCSSCEEEEECH------HHHHHH
T ss_pred hhCCHHHHHHHHHHcCCeEEEEccccccCccc-----cccccCCcEEEEeccccccCCCceEEEEECH------HHHHHH
Confidence 7899999999999999999999988764321 122 579999999999987755 9999987 555544
Q ss_pred cc---------------cc--cCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcCcEEecCC-
Q 009673 341 NN---------------AV--FPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGYKLVSGG- 401 (529)
Q Consensus 341 ~~---------------~~--~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~g- 401 (529)
.. .. .....++++...++++..+++..... ++++..+++.++++.+.+.|++.|+++..+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 309 (386)
T 2dr1_A 230 EKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPG 309 (386)
T ss_dssp TTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTT
T ss_pred hcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeeCcCcc
Confidence 21 00 01223456666777777778765433 4678889999999999999998888876541
Q ss_pred -CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 402 -SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 402 -t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
...+++++.+. .+.+..++.+.|.+.||.+..+..+ ..++.+||++... .+++|++++++.|+++++.
T Consensus 310 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~~~~~-----~~~~~iRi~~~~~----~~~~~i~~~~~~l~~~~~~ 378 (386)
T 2dr1_A 310 HESPTITAVLTP-PGIKGDEVYEAMRKRGFELAKGYGS-----VKEKTFRIGHMGY----MKFEDIQEMLDNLREVINE 378 (386)
T ss_dssp CBCSSEEEEECC-TTCCHHHHHHHHHHTTEECEECCGG-----GTTTEEEEECCSS----CCHHHHHHHHHHHHHHHHH
T ss_pred ccCCceEEEEcC-CCCCHHHHHHHHHHCCeEEecCccc-----cCCCEEEEECCCC----CCHHHHHHHHHHHHHHHHH
Confidence 12455666664 3456777888887779998653311 2357899998653 3589999999999998764
No 16
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.96 E-value=2e-27 Score=245.11 Aligned_cols=331 Identities=13% Similarity=0.102 Sum_probs=229.8
Q ss_pred cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (529)
Q Consensus 103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~ 182 (529)
...++.+++..+|++|++++...+...+ +..+ .++.+.+++++++++|++.+.- +.+.+.+|++|+.
T Consensus 19 ~~~~~~pgp~~~~~~v~~a~~~~~~~~~-----------~~~~-~~~~~~~~~~la~~~g~~~~~~-~i~~~~ggt~al~ 85 (376)
T 3f0h_A 19 GMLNFTVGPVMSSEEVRAIGAEQVPYFR-----------TTEF-SSTMLENEKFMLEYAKAPEGSK-AVFMTCSSTGSME 85 (376)
T ss_dssp SCEECSSSSCCCCHHHHHHHTSCCCCCS-----------SHHH-HHHHHHHHHHHHHHHTCCTTCE-EEEESSCHHHHHH
T ss_pred CceeecCCCCCCcHHHHHHhcCCCCCCC-----------CHHH-HHHHHHHHHHHHHHhCCCCCce-EEEEcCChhHHHH
Confidence 5678888888899999999986543211 1122 2333455689999999975311 2222456679999
Q ss_pred HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (529)
Q Consensus 183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~ 262 (529)
.++.++++|||+|+++++.+.++. +. ......|. +++.++++ +++.+|++++++.+++ ++++|++++++|
T Consensus 86 ~~~~~~~~~gd~vi~~~~~~~~~~---~~---~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~n 155 (376)
T 3f0h_A 86 AVVMNCFTKKDKVLVIDGGSFGHR---FV---QLCEIHEI--PYVALKLE-HGKKLTKEKLYEYDNQ-NFTGLLVNVDET 155 (376)
T ss_dssp HHHHHHCCTTCCEEEEESSHHHHH---HH---HHHHHTTC--CEEEEECC-TTCCCCHHHHHTTTTS-CCCEEEEESEET
T ss_pred HHHHhccCCCCeEEEEeCChhhHH---HH---HHHHHcCC--ceEEEeCC-CCCCCCHHHHHHhhcc-CceEEEEecccC
Confidence 999999999999999987543321 10 01223344 45555555 4578999999998876 899999987777
Q ss_pred CC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHH
Q 009673 263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (529)
Q Consensus 263 p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~ 337 (529)
|+ ..|+++|+++|++||+++|+|++|..+.... .+. ++|++++|+||++.|+.| |++++++ ++.
T Consensus 156 ptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~-----~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~------~~~ 224 (376)
T 3f0h_A 156 STAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPF-----NMNECGADVMITGSQKVLACPPGISVIVLAP------RGV 224 (376)
T ss_dssp TTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCC-----CHHHHTCSEEEEETTTTTCCCSSCEEEEECH------HHH
T ss_pred CcceecCHHHHHHHHHHcCCEEEEEcCccccCccc-----cccccCccEEEecCcccccCCCceEEEEECH------HHH
Confidence 76 7889999999999999999999987654321 121 479999999999986666 8988887 566
Q ss_pred hhhcccccC----------------CCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcCcEEecC
Q 009673 338 SAINNAVFP----------------GLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGYKLVSG 400 (529)
Q Consensus 338 ~~i~~~~~p----------------~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~ 400 (529)
+++.....+ +...+++...++++..+++.+... ++++..++..++++++.+.|.+.|+.+..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 304 (376)
T 3f0h_A 225 ERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLPFELVSE 304 (376)
T ss_dssp HHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCS
T ss_pred HHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCccCcc
Confidence 555432111 123355565666777777765544 467888888899999999998888877654
Q ss_pred CCCCceEEEccCCCCCcHHHHHHhHhcC-CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 401 GSDNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 401 gt~~~~~~v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.....+..+. +.+.+..++.+.|.+. ||.+..+. ++..++.+||+++.. .+++|++++++.|+++++
T Consensus 305 ~~~~~~~~~~--~~~~~~~~l~~~l~~~~gi~v~~g~-----~~~~~~~lRis~~~~----~t~e~i~~~~~~l~~~l~ 372 (376)
T 3f0h_A 305 SPANGVTSVH--PTTANAYDIFLKLKDEYGIWICPNG-----GEMKDTIFRVGHIGA----LTHEDNTTLVNAFKDLQK 372 (376)
T ss_dssp SBBTTEEEEE--ESSSCHHHHHHHHHHHSSEECEECC-----GGGTTTCEEEECCSS----CCHHHHHHHHHHHHHHHH
T ss_pred ccCceEEEEe--CCCCCHHHHHHHHHHhCCEEEecCc-----cccCCCEEEEecCCC----CCHHHHHHHHHHHHHHHH
Confidence 2222333332 3455777887777665 99986431 112357899998654 358999999999998875
No 17
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.96 E-value=1.8e-27 Score=247.29 Aligned_cols=335 Identities=20% Similarity=0.218 Sum_probs=237.0
Q ss_pred cceeEecCCC---CCcHHHHHHHhhhhhccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673 103 KSLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (529)
Q Consensus 103 ~~i~L~asen---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g-~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs 178 (529)
..|++..+.. ..++.+.+++...+.. |..++++.++..| .+...+++ +++++++|.+. .|.+++|+
T Consensus 44 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~l~----~~la~~~~~~~-----~i~~~sGt 113 (399)
T 3tqx_A 44 EVLNFCANNYLGLADHPALIKTAQTVVEQ-YGFGMASVRFICGTQTIHKELE----KDISEFLGTDD-----TILYSSCF 113 (399)
T ss_dssp EEEECSSCCTTSCTTCHHHHHHHHHHHHH-HCSCCCSCCCCCCCBHHHHHHH----HHHHHHHTCSE-----EEEESCHH
T ss_pred eEEEeeccCcccccCCHHHHHHHHHHHHH-hCCCCCCcCccccCchHHHHHH----HHHHHHHCCCc-----EEEECchH
Confidence 3466666532 2369999999887754 5555566665444 33344444 78888999863 46679999
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCc
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPK 253 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pk 253 (529)
+|+..++.++++|||+|++.+|.|++... .+...|. +++.++. +|++++++.+++. +++
T Consensus 114 ~a~~~~l~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~~------~d~~~l~~~l~~~~~~~~~~~ 177 (399)
T 3tqx_A 114 DANGGLFETLLGPEDAIISDELNHASIID--------GIRLCKA--QRYRYKN------NAMGDLEAKLKEADEKGARFK 177 (399)
T ss_dssp HHHHTTHHHHCCTTCEEEEETTCCHHHHH--------HHHSCCS--EEEEECT------TCTTHHHHHHHHHHTTTCSSE
T ss_pred HHHHHHHHHhcCCCCEEEECCcccHHHHH--------HHHHcCC--ceeEeCC------CCHHHHHHHHHhhhccCCCce
Confidence 99999999999999999999998865431 2344554 5556543 5778888888764 789
Q ss_pred EEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC----CC-CCcccEEEecccccccCCCCeEEEe
Q 009673 254 LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA----DP-FKYCDVVTTTTHKSLRGPRGGMIFF 326 (529)
Q Consensus 254 lIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~----~~-~~~aDiv~~S~hK~l~GprgG~i~~ 326 (529)
+|++++++||+ ..|+++|.++|++||+++|+|++|..|........ .. ....|++++|+||++.|++||++++
T Consensus 178 ~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~ 257 (399)
T 3tqx_A 178 LIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASGGYTSG 257 (399)
T ss_dssp EEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCCEEEEE
T ss_pred EEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCceEEEEc
Confidence 99999888876 77899999999999999999999876653221100 00 1246899999999998899999999
Q ss_pred eCCCcchhHHHhhhcccccCC-CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673 327 KKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 405 (529)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~ 405 (529)
++ ++.+.+.....+. ..++++...++++..+++... .+.++..+++.++++++.+.|++.|+++..+ ..+
T Consensus 258 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~ 328 (399)
T 3tqx_A 258 HK------EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKLGFQLVPG--NHP 328 (399)
T ss_dssp CH------HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHTCCBCCC--SSS
T ss_pred CH------HHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHcCCCcCCC--CCC
Confidence 88 6666665421111 133455556666666776553 3457888999999999999999988887643 345
Q ss_pred eEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 406 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 406 ~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
++++.+.. +.+..++.+.|.++||.+.....|+. +...+.+||+++.. .+++|++++++.|+++++.
T Consensus 329 ~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~~--~~~~~~iRi~~~~~----~~~~~i~~~~~~l~~~~~~ 395 (399)
T 3tqx_A 329 IIPVMLGD-AQLATNMADHLLQEGIYVVGFSYPVV--PMGKARIRVQMSAV----HTQQQLDRAIEAFGQVGKK 395 (399)
T ss_dssp EEEEEEEC-HHHHHHHHHHHHHTTEECCEECTTTS--CTTCEEEEEECCTT----CCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCC-HHHHHHHHHHHHHCCCEEeeeCCCCC--CCCCceEEEEeecC----CCHHHHHHHHHHHHHHHHH
Confidence 66666542 22456777788788999864322211 22356899997643 4589999999999998763
No 18
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.96 E-value=5.8e-27 Score=242.48 Aligned_cols=335 Identities=13% Similarity=0.074 Sum_probs=233.8
Q ss_pred ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (529)
Q Consensus 104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~ 183 (529)
.+.+.++...+++.|++++...+...+ + .....+....++++++++|.+.++. .+..++|++|+..
T Consensus 24 ~~~~~p~p~~~~~~v~~a~~~~~~~~~---------~---~~~~~~~~~l~~~la~~~~~~~~~~--v~~~~gg~~al~~ 89 (393)
T 3kgw_A 24 RLLLGPGPSNLAPRVLAAGSLRMIGHM---------Q---KEMLQIMEEIKQGIQYVFQTRNPLT--LVVSGSGHCAMET 89 (393)
T ss_dssp CEECSSSCCCCCHHHHHHTTCCCCCTT---------S---HHHHHHHHHHHHHHHHHHTCCCSEE--EEESCCTTTHHHH
T ss_pred ceeccCCCCCCCHHHHHHhcccccCcc---------c---HHHHHHHHHHHHHHHHHhCCCCCcE--EEEeCCcHHHHHH
Confidence 466777777889999999976432211 1 1122333445688999999975421 2344566799999
Q ss_pred HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (529)
Q Consensus 184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p 263 (529)
++.++++|||+|+++.+.+.++ .+ ...+...|. +++.++++ +++.+|+++|++.+++.++++|++++++||
T Consensus 90 ~~~~~~~~gd~vl~~~~~~~~~---~~---~~~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~np 160 (393)
T 3kgw_A 90 ALFNLLEPGDSFLTGTNGIWGM---RA---AEIADRIGA--RVHQMIKK-PGEHYTLQEVEEGLAQHKPVLLFLVHGESS 160 (393)
T ss_dssp HHHHHCCTTCEEEEEESSHHHH---HH---HHHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred HHHhcCCCCCEEEEEeCCchhH---HH---HHHHHHcCC--ceEEEeCC-CCCCCCHHHHHHHHhhCCCcEEEEeccCCc
Confidence 9999999999999987543211 10 012233454 66666665 356899999999998778999999988887
Q ss_pred C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhh
Q 009673 264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 340 (529)
Q Consensus 264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i 340 (529)
+ ..|+++|.++|++||++||+|++|..|....+... .++|++++|+||++.|+.| |++++++ ++.+.+
T Consensus 161 tG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~---~~~d~~~~s~sK~~~~~~g~g~~~~~~------~~~~~~ 231 (393)
T 3kgw_A 161 TGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQ---QGIDIMYSSSQKVLNAPPGISLISFND------KAKYKV 231 (393)
T ss_dssp TTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTT---TTCCEEEEESSSTTCCCSSCEEEEECH------HHHHHH
T ss_pred chhhccHHHHHHHHHHcCCEEEEECCccccCcccchhh---cCCCEEEecCcccccCCCceeEEEECH------HHHHHH
Confidence 6 67899999999999999999999876643222111 1579999999999977766 9999987 566555
Q ss_pred ccccc----------------------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe
Q 009673 341 NNAVF----------------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV 398 (529)
Q Consensus 341 ~~~~~----------------------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~ 398 (529)
..... ....++++...++++..+++.....++++..+++.++++.+.+.|++.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 311 (393)
T 3kgw_A 232 YSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMGLKFF 311 (393)
T ss_dssp HTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBS
T ss_pred hccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeec
Confidence 33211 11235667777777777777655445688899999999999999999888876
Q ss_pred cCCC---CCceEEEccCCCCCcHHHHHHhHhcC-CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673 399 SGGS---DNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 474 (529)
Q Consensus 399 ~~gt---~~~~~~v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~ 474 (529)
.+.. ...+.++.+. .+.+..++.+.|.+. ||.+..+.. +..++++||++...+ .+++|++++++.|+
T Consensus 312 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~-----~~~~~~iRi~~~~~~---~~~~~i~~~~~~l~ 382 (393)
T 3kgw_A 312 VKDPEIRLPTITTVTVP-AGYNWRDIVSYVLDHFSIEISGGLG-----PTEERVLRIGLLGYN---ATTENVDRVAEALR 382 (393)
T ss_dssp SSSGGGBCSSEEEEECC-TTBCHHHHHHHHHHHHCEECBCCCG-----GGTTTEEEEECCGGG---CCHHHHHHHHHHHH
T ss_pred cCChhhcCCeEEEEeCC-CCCCHHHHHHHHHHhCCEEEeCCcc-----cCCCCEEEEEecccC---CCHHHHHHHHHHHH
Confidence 4211 1233445543 355677777777655 999964321 224578999963322 25899999999999
Q ss_pred HHHHH
Q 009673 475 EGVEI 479 (529)
Q Consensus 475 ~~~~~ 479 (529)
+++..
T Consensus 383 ~~l~~ 387 (393)
T 3kgw_A 383 EALQH 387 (393)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98864
No 19
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.95 E-value=8e-27 Score=243.84 Aligned_cols=345 Identities=17% Similarity=0.145 Sum_probs=237.2
Q ss_pred ceeEecCCC-CCcHHHHHHHhhhhhccCCCCCCC--CCCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCceeeecCChHH
Q 009673 104 SLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPG--KRYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGSP 179 (529)
Q Consensus 104 ~i~L~asen-~~~~~V~eal~~~l~~~y~~G~p~--~r~~~g~~~~d~lE~~a~~~la~~~g~-~~~~~~~~V~~~sGs~ 179 (529)
.+.|..+++ .+|+.|++++...+.+.+. .+. ...|+ ....+.++ .+++.+++++|. +++. .+...+|++
T Consensus 29 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~--~~~~~~~~y~-~~~~~~~~-~l~~~la~~~~~~~~~~---v~~~~g~t~ 101 (420)
T 1t3i_A 29 LVYLDNAATSQKPRAVLEKLMHYYENDNA--NVHRGAHQLS-VRATDAYE-AVRNKVAKFINARSPRE---IVYTRNATE 101 (420)
T ss_dssp CEECBTTTCCCCCHHHHHHHHHHHHHTCC--CC--CCSHHH-HHHHHHHH-HHHHHHHHHTTCSCGGG---EEEESSHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhccC--CCCcccchHH-HHHHHHHH-HHHHHHHHHcCCCCCCe---EEEcCChHH
Confidence 577776554 5789999999888754321 221 11121 11112223 455889999998 4432 233455669
Q ss_pred HHHHHHHhh----cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673 180 ANFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (529)
Q Consensus 180 A~~~~l~al----l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI 255 (529)
|+..++.++ ++|||+|+++++.|.+.... +. ..+...|. +++.++++ +++.+|+++|++++++ ++++|
T Consensus 102 a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~-~~---~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~-~~~~v 173 (420)
T 1t3i_A 102 AINLVAYSWGMNNLKAGDEIITTVMEHHSNLVP-WQ---MVAAKTGA--VLKFVQLD-EQESFDLEHFKTLLSE-KTKLV 173 (420)
T ss_dssp HHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHH-HH---HHHHHHCC--EEEEECBC-TTSSBCHHHHHHHCCT-TEEEE
T ss_pred HHHHHHHHhhhcccCCCCEEEECcchhHHHHHH-HH---HHHHhcCc--EEEEeccC-CCCCcCHHHHHHhhCC-CceEE
Confidence 999999999 99999999999988764210 10 01123344 66677776 5678999999999987 89999
Q ss_pred EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcc
Q 009673 256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL 332 (529)
Q Consensus 256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~ 332 (529)
++++++||+ ..|+++|.++|+++|+++|+|++|..|....+.... +.|++++|+||.+ |+.| |++++++
T Consensus 174 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~di~~~s~sK~~-~~~g~G~~~~~~---- 245 (420)
T 1t3i_A 174 TVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLI---DCDWLVASGHKMC-APTGIGFLYGKE---- 245 (420)
T ss_dssp EEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TCSEEEEEGGGTT-SCTTCEEEEECH----
T ss_pred EEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhc---CCCEEEEehhhhc-CCCceEEEEEch----
Confidence 998888775 788999999999999999999998876432111000 4799999999965 5655 9999987
Q ss_pred hhHHHhhhcccccCC--------------------CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673 333 GVELESAINNAVFPG--------------------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (529)
Q Consensus 333 ~~~l~~~i~~~~~p~--------------------~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~ 392 (529)
++.+++......+ ..++++..+++++..+++.+...++++..+++.++++.+.+.|++
T Consensus 246 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 323 (420)
T 1t3i_A 246 --EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQ 323 (420)
T ss_dssp --HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --HHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 6777665433211 135667777777766777654335678888899999999999998
Q ss_pred c-CcEEecCCC----CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC--CCCC-CCeEEEccCCCccCCCCHH
Q 009673 393 L-GYKLVSGGS----DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK--SALV-PGGIRIGSPAMTTRGFSEK 464 (529)
Q Consensus 393 ~-G~~v~~~gt----~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~--~~~~-~~~iRig~~~~tt~g~~~~ 464 (529)
. |++++.+.. ...++++.+. +.+..++.+.|.+.||.+..+..+... ..++ ++++||++... .+++
T Consensus 324 ~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~----~~~~ 397 (420)
T 1t3i_A 324 IPQLRLYGPNPKHGDRAALASFNVA--GLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFY----NTKE 397 (420)
T ss_dssp CTTEEEESCCGGGSCBCSEEEEEET--TBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTT----CCHH
T ss_pred CCCeEEeCCCccccccCCEEEEEEC--CCCHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCC----CCHH
Confidence 5 888876531 2455566654 346677888999999998543211000 0012 57899997643 3589
Q ss_pred HHHHHHHHHHHHHHH
Q 009673 465 EFVAIADFIHEGVEI 479 (529)
Q Consensus 465 d~~~la~~i~~~~~~ 479 (529)
|++++++.|+++++.
T Consensus 398 ~i~~~~~~l~~~~~~ 412 (420)
T 1t3i_A 398 EIDLFLQSLQATIRF 412 (420)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988763
No 20
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.95 E-value=5.4e-27 Score=238.91 Aligned_cols=328 Identities=14% Similarity=0.096 Sum_probs=231.3
Q ss_pred eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC-hHHHHHH
Q 009673 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPANFE 183 (529)
Q Consensus 105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s-Gs~A~~~ 183 (529)
+.+++++.++|+.|++++...+.+. ++ .. ..+....+++++++++|.+.+. .+|.+++ |++|+..
T Consensus 2 ~~~~~gp~~~~~~v~~a~~~~~~~~--------~~---~~-~~~~~~~l~~~la~~~g~~~~~--~~v~~t~g~t~a~~~ 67 (353)
T 2yrr_A 2 LLLTPGPTPIPERVQKALLRPMRGH--------LD---PE-VLRVNRAIQERLAALFDPGEGA--LVAALAGSGSLGMEA 67 (353)
T ss_dssp EECSSSSCCCCHHHHGGGGSCCCCT--------TC---HH-HHHHHHHHHHHHHHHHCCCTTC--EEEEESSCHHHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHhcccccc--------cC---HH-HHHHHHHHHHHHHHHhCCCCCC--ceEEEcCCcHHHHHH
Confidence 5677888889999999998766431 11 11 2233445668999999996211 1344455 5599999
Q ss_pred HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (529)
Q Consensus 184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p 263 (529)
++.++++ |+|++++++|.++ . + ...+...|. +++.++++ +++.+|+++|++.+++.++++|++++++||
T Consensus 68 ~~~~~~~--d~vl~~~~~~~~~-~--~---~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~np 136 (353)
T 2yrr_A 68 GLANLDR--GPVLVLVNGAFSQ-R--V---AEMAALHGL--DPEVLDFP-PGEPVDPEAVARALKRRRYRMVALVHGETS 136 (353)
T ss_dssp HHHTCSC--CCEEEEECSHHHH-H--H---HHHHHHTTC--CEEEEECC-TTSCCCHHHHHHHHHHSCCSEEEEESEETT
T ss_pred HHHHhcC--CcEEEEcCCCchH-H--H---HHHHHHcCC--ceEEEeCC-CCCCCCHHHHHHHHHhCCCCEEEEEccCCC
Confidence 9999887 8999988766543 1 1 011233454 55666665 357899999999997657999999888887
Q ss_pred C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHHh
Q 009673 264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (529)
Q Consensus 264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~ 338 (529)
+ ..|+++|.++|+++|+++|+|++|..|... .++. ++|++++|+||++.|+.| |++++++ ++.+
T Consensus 137 tG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~-----~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~------~~~~ 205 (353)
T 2yrr_A 137 TGVLNPAEAIGALAKEAGALFFLDAVTTLGMLP-----FSMRAMGVDYAFTGSQKCLSAPPGLAPIAASL------EARK 205 (353)
T ss_dssp TTEECCHHHHHHHHHHHTCEEEEECTTTTTTSC-----CCHHHHTCSEEECCTTSTTCCCSSCEEEEECH------HHHH
T ss_pred cceecCHHHHHHHHHHcCCeEEEEcCccccccc-----ccccccCceEEEecCcccccCCCceEEEEECH------HHHH
Confidence 6 789999999999999999999998655331 1222 469999999999888776 9999988 5655
Q ss_pred hhcc---c----------c-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCC-CC
Q 009673 339 AINN---A----------V-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG-SD 403 (529)
Q Consensus 339 ~i~~---~----------~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~g-t~ 403 (529)
++.. . . .....++++...++++..+++.....++++..+++.++++++.+.|++.|+++..+. ..
T Consensus 206 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 285 (353)
T 2yrr_A 206 AFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKARGFRPYPKASPL 285 (353)
T ss_dssp HCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBC
T ss_pred HhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCccccCccCC
Confidence 5531 0 0 012235667777777777777654444678889999999999999988888877532 13
Q ss_pred CceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH-HHHHHHHHHHH
Q 009673 404 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV-AIADFIHEGVE 478 (529)
Q Consensus 404 ~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~-~la~~i~~~~~ 478 (529)
++++++.+. .+.+..++.+.|.+.||.+..+..+ ..++++||+++... +++|++ ++++.|+++++
T Consensus 286 ~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~g~~~-----~~~~~iRi~~~~~~----~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 286 PTVLVVRPP-EGVDADRLVRALYAEGVAVAGGIGP-----TRGQVLRLGLMGEG----ARREAYQAFLKALDRALA 351 (353)
T ss_dssp TTEEEEECC-TTCCHHHHHHHHHHTTEECEECCGG-----GTTTCEEEECSGGG----SCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEECC-CCCCHHHHHHHHHHCCEEEeCCccc-----cCCCeEEEecCccC----CHHHHHHHHHHHHHHHHh
Confidence 455566663 3567788888888889998643211 23578999985443 368898 99999988765
No 21
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.95 E-value=1e-26 Score=241.69 Aligned_cols=343 Identities=15% Similarity=0.114 Sum_probs=237.2
Q ss_pred ceeEecCCC-CCcHHHHHHHhhhhhccCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCceeeecCChHHH
Q 009673 104 SLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGSPA 180 (529)
Q Consensus 104 ~i~L~asen-~~~~~V~eal~~~l~~~y~~G~p~~-r~~~g~~~~d~lE~~a~~~la~~~g~-~~~~~~~~V~~~sGs~A 180 (529)
.+.|..+++ +.|+.|++++...+.+.+ +.+.. .+..+.. .......+++++++++|. +++. .+..++|++|
T Consensus 24 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~~~~~~~---v~~~~g~t~a 97 (406)
T 1kmj_A 24 LAYLDSAASAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQ-ATEKMENVRKRASLFINARSAEE---LVFVRGTTEG 97 (406)
T ss_dssp CEECCTTTCCCCCHHHHHHHHHHHHHTC--CCCSSCSSHHHHH-HHHHHHHHHHHHHHHTTCSCGGG---EEEESSHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhhc--CCCCCCcchHHHH-HHHHHHHHHHHHHHHcCCCCCCe---EEEeCChhHH
Confidence 467765543 678999999998876533 12211 0110111 122233456889999998 4432 2333455599
Q ss_pred HHHHHHhh----cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673 181 NFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (529)
Q Consensus 181 ~~~~l~al----l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi 256 (529)
+..++.++ ++|||+|+++++.|.+.+.. +. ..+...|. +++.++++ +++.+|+++|++.+++ ++++|+
T Consensus 98 ~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~-~~---~~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~l~~-~~~~v~ 169 (406)
T 1kmj_A 98 INLVANSWGNSNVRAGDNIIISQMEHHANIVP-WQ---MLCARVGA--ELRVIPLN-PDGTLQLETLPTLFDE-KTRLLA 169 (406)
T ss_dssp HHHHHHHTHHHHCCTTCEEEEETTCCGGGTHH-HH---HHHHHHTC--EEEEECBC-TTSCBCGGGHHHHCCT-TEEEEE
T ss_pred HHHHHHHhhhhcCCCCCEEEEecccchHHHHH-HH---HHHHhCCC--EEEEEecC-CCCCcCHHHHHHHhcc-CCeEEE
Confidence 99999999 89999999999988665321 10 01223354 66677776 4578999999999987 899999
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCc
Q 009673 257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPV 331 (529)
Q Consensus 257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~ 331 (529)
+++++||+ ..|+++|.++|++||+++|+|++|..|.... .+. +.|++++|+||++ ||.| |++++++
T Consensus 170 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~-----~~~~~~~d~~~~s~~K~~-g~~G~G~~~~~~--- 240 (406)
T 1kmj_A 170 ITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPV-----DVQALDCDFYVFSGHKLY-GPTGIGILYVKE--- 240 (406)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC-----CHHHHTCSEEEEEGGGTT-SCTTCEEEEECH---
T ss_pred EeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCC-----cccccCCCEEEEEchhcc-CCCCcEEEEEeH---
Confidence 98887775 7889999999999999999999987664321 111 5799999999988 7777 9999987
Q ss_pred chhHHHhhhcccccC---------------------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673 332 LGVELESAINNAVFP---------------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (529)
Q Consensus 332 ~~~~l~~~i~~~~~p---------------------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L 390 (529)
++.+++...... ...|+++..+++++..+++.+...++++..+++.++++++.+.|
T Consensus 241 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 317 (406)
T 1kmj_A 241 ---ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQL 317 (406)
T ss_dssp ---HHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 677666543211 11456777788887667776543456778888889999999999
Q ss_pred Hhc-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC--CCC-CCCeEEEccCCCccCCCCHHHH
Q 009673 391 VEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK--SAL-VPGGIRIGSPAMTTRGFSEKEF 466 (529)
Q Consensus 391 ~~~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~--~~~-~~~~iRig~~~~tt~g~~~~d~ 466 (529)
++. |+++..+.....++++.+. +.+..++.+.|.+.||.+..+...... ..+ .++.+||+++..+ +++|+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~----t~~~i 391 (406)
T 1kmj_A 318 ESVPDLTLYGPQNRLGVIAFNLG--KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYN----THEEV 391 (406)
T ss_dssp TTSTTEEEESCTTCCSEEEEEET--TCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTC----CHHHH
T ss_pred hcCCCeEEecCCCcCCEEEEEEC--CCCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCC----CHHHH
Confidence 885 8887764212445556653 456777888999999998543210000 001 1578999987543 58999
Q ss_pred HHHHHHHHHHHH
Q 009673 467 VAIADFIHEGVE 478 (529)
Q Consensus 467 ~~la~~i~~~~~ 478 (529)
+++++.|+++++
T Consensus 392 ~~~~~~l~~~~~ 403 (406)
T 1kmj_A 392 DRLVTGLQRIHR 403 (406)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998875
No 22
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.95 E-value=1.6e-26 Score=239.87 Aligned_cols=329 Identities=13% Similarity=0.083 Sum_probs=230.1
Q ss_pred eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC-ChHHHHHH
Q 009673 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGSPANFE 183 (529)
Q Consensus 105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~-sGs~A~~~ 183 (529)
..+.++..++++.|++++...+.+.| + .. ..++.+.+++++++++|++++. +|.++ +|++|+..
T Consensus 36 ~l~~~~~~~~~~~v~~a~~~~~~~~~----------~-~~-~~~~~~~~~~~la~~~g~~~~~---~v~~t~g~t~al~~ 100 (393)
T 1vjo_A 36 LLLGPGPSNAHPSVLQAMNVSPVGHL----------D-PA-FLALMDEIQSLLRYVWQTENPL---TIAVSGTGTAAMEA 100 (393)
T ss_dssp EECSSSCCCCCHHHHHHHSSCCCCTT----------S-HH-HHHHHHHHHHHHHHHHTCCCSC---EEEESSCHHHHHHH
T ss_pred eeccCCCCCCCHHHHHHHhccccccc----------C-HH-HHHHHHHHHHHHHHHhCCCCCc---EEEEeCchHHHHHH
Confidence 44455666789999999987654322 1 11 2344445668999999997541 23344 55699999
Q ss_pred HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (529)
Q Consensus 184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p 263 (529)
++.++++|||+|++++|.|.+. .+ ...+...|. +++.++++ +++.+|+++|++.+++.++++|++++++||
T Consensus 101 ~~~~~~~~gd~Vl~~~~~~~~~---~~---~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~np 171 (393)
T 1vjo_A 101 TIANAVEPGDVVLIGVAGYFGN---RL---VDMAGRYGA--DVRTISKP-WGEVFSLEELRTALETHRPAILALVHAETS 171 (393)
T ss_dssp HHHHHCCTTCEEEEEESSHHHH---HH---HHHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred HHHhccCCCCEEEEEcCChhHH---HH---HHHHHHcCC--ceEEEecC-CCCCCCHHHHHHHHhhCCceEEEEeccCCC
Confidence 9999999999999999876541 01 112234454 66666676 357899999999997657899999888777
Q ss_pred C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHHh
Q 009673 264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (529)
Q Consensus 264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~ 338 (529)
+ ..|+++|.++|+++|+++|+|++|..|... ..+. ++|++++|+||++.+|.+ |++++++ ++.+
T Consensus 172 tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~-----~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~------~~~~ 240 (393)
T 1vjo_A 172 TGARQPLEGVGELCREFGTLLLVDTVTSLGGVP-----IFLDAWGVDLAYSCSQKGLGCSPGASPFTMSS------RAIE 240 (393)
T ss_dssp TTEECCCTTHHHHHHHHTCEEEEECTTTTTTSC-----CCTTTTTCSEEECCSSSTTCSCSSCEEEEECH------HHHH
T ss_pred cceeccHHHHHHHHHHcCCEEEEECCccccCcC-----CcccccCccEEEEcCcccccCCCceEEEEECH------HHHH
Confidence 6 678999999999999999999998865432 1222 579999999999977655 9999987 6666
Q ss_pred hhccc-------cc------------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec
Q 009673 339 AINNA-------VF------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (529)
Q Consensus 339 ~i~~~-------~~------------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~ 399 (529)
.+... .+ ....|+++...++++..+++.....++++..+++.++++.+.+.|++.|+++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 320 (393)
T 1vjo_A 241 KLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHV 320 (393)
T ss_dssp HHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSS
T ss_pred HHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence 55221 00 111236677777777778876543346788899999999999999888888765
Q ss_pred CCC--CCceEEEccCCCCCcHHHHHHhHhcC-CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 400 GGS--DNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 400 ~gt--~~~~~~v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
+.. ..+++++.+. .+.+..++.+.|.+. ||.+..+..+ ..++++||++..++ .++++++++++.|+++
T Consensus 321 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~-----~~~~~iRis~~~~~---~~~~~i~~~~~~l~~~ 391 (393)
T 1vjo_A 321 EKEYRLPTLTTVCIP-DGVDGKAVARRLLNEHNIEVGGGLGE-----LAGKVWRVGLMGFN---SRKESVDQLIPALEQV 391 (393)
T ss_dssp CGGGBCSSEEEEECC-TTCCHHHHHHHHHHHHCEECEECCGG-----GTTTEEEEECCGGG---CSHHHHHHHHHHHHHH
T ss_pred CccccCCcEEEEEcC-CCCCHHHHHHHHHhhCCEEEecCccc-----cCCCEEEEeCCccC---ChHHHHHHHHHHHHHH
Confidence 421 1234455552 345677787777765 9998543211 23578999953332 2467899999999876
Q ss_pred H
Q 009673 477 V 477 (529)
Q Consensus 477 ~ 477 (529)
+
T Consensus 392 l 392 (393)
T 1vjo_A 392 L 392 (393)
T ss_dssp H
T ss_pred h
Confidence 5
No 23
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.95 E-value=5e-27 Score=241.58 Aligned_cols=335 Identities=15% Similarity=0.164 Sum_probs=231.4
Q ss_pred CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-HHHHHHHHHhh
Q 009673 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAI 188 (529)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s~A~~~~l~al 188 (529)
+..++++.|++++...+.+.+ ++|...|..+ ....++.+.+++++++++|++++ +|.+++| ++|+..++.++
T Consensus 8 ~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~la~~~~~~~~----~i~~~~g~~~a~~~~~~~~ 80 (382)
T 4hvk_A 8 SAKPVDERILEAMLPYMTESF--GNPSSVHSYG-FKAREAVQEAREKVAKLVNGGGG----TVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp TCCCCCHHHHHHHHHHHHTSC--CCTTCSSHHH-HHHHHHHHHHHHHHHHHTTCTTE----EEEEESSHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHHhhc--CCCcccchHH-HHHHHHHHHHHHHHHHHcCCCcC----eEEEECCchHHHHHHHHHh
Confidence 345789999999998886644 3444332222 22234444567899999999864 3444555 59999999998
Q ss_pred c----CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC
Q 009673 189 L----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 264 (529)
Q Consensus 189 l----~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~ 264 (529)
+ +|||+|++++++|.++.... ......|. +++.++++ +++.+|+++|++.+++ ++++|++++++||+
T Consensus 81 ~~~~~~~gd~vi~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~npt 151 (382)
T 4hvk_A 81 AMRNARKGKHILVSAVEHMSVINPA-----KFLQKQGF--EVEYIPVG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEI 151 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHHHH-----HHHHHTTC--EEEEECBC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTT
T ss_pred hhhhcCCCCEEEECCCCcHHHHHHH-----HHHHhcCC--EEEEeccC-CCCCcCHHHHHHHhcc-CceEEEEECCCCCc
Confidence 7 99999999998876553211 01111344 67777776 5678999999999987 88999998888876
Q ss_pred --CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhc
Q 009673 265 --DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 341 (529)
Q Consensus 265 --~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~ 341 (529)
..|+++|.++|++||+ +++|++|+.|....+... .++|++++|+||++ |+.| |+++++++ . .+.
T Consensus 152 G~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~---~~~d~~~~s~~K~~-g~~g~g~~~~~~~------~--~~~ 218 (382)
T 4hvk_A 152 GTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEK---IGADMLTISSNDIY-GPKGVGALWIRKE------A--KLQ 218 (382)
T ss_dssp CBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHH---HTCSEEEEESGGGT-SCTTCEEEEEETT------C--CCC
T ss_pred eeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchh---cCCCEEEEeHHHhc-CCCceEEEEEcCc------c--CcC
Confidence 7899999999999999 999999887654222110 04799999999975 6765 99999874 2 222
Q ss_pred ccccC------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCC--CceEEEccC
Q 009673 342 NAVFP------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSD--NHLVLVDLR 412 (529)
Q Consensus 342 ~~~~p------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~--~~~~~v~~~ 412 (529)
..... ...++++...++++..+++... .++++..+++.++++++.+.|++. |+.+..+... .+++.+.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~- 296 (382)
T 4hvk_A 219 PVILGGGQENGLRSGSENVPSIVGFGKAAEITA-MEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRF- 296 (382)
T ss_dssp CSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEE-
T ss_pred cccccCCCcCccccCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEE-
Confidence 21111 1145567777777777776543 456788889999999999999884 8887654211 23444444
Q ss_pred CCCCcHHHHHHhHhcCCeEEcCCCCCCCCC--C------CC------CCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 413 PMGIDGARVEKILDMASITLNKNSVPGDKS--A------LV------PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 413 ~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~--~------~~------~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.+.+..++.+.|.++||.+..+..++... + +. +++|||++... .+++|++++++.|+++++
T Consensus 297 -~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~----~t~e~i~~~~~~l~~~~~ 371 (382)
T 4hvk_A 297 -SYIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRY----NTDEDVDRLLEVLPGVIE 371 (382)
T ss_dssp -TTCCHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTT----CCHHHHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCC----CCHHHHHHHHHHHHHHHH
Confidence 34577888899999999986543211100 0 00 47899998654 358999999999999887
Q ss_pred HH
Q 009673 479 IT 480 (529)
Q Consensus 479 ~~ 480 (529)
..
T Consensus 372 ~~ 373 (382)
T 4hvk_A 372 RL 373 (382)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 24
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.95 E-value=1.1e-26 Score=237.82 Aligned_cols=333 Identities=15% Similarity=0.107 Sum_probs=227.4
Q ss_pred ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (529)
Q Consensus 104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~ 183 (529)
.+++.++...++++|++++...+.+. ++. + ..+..++ .++++++++|. ++.....+...+|++|+..
T Consensus 5 ~~~~~~gp~~~~~~v~~a~~~~~~~~----~~~--~--~~~~~~~----l~~~la~~~g~-~~~~~~v~~~~g~t~a~~~ 71 (366)
T 1m32_A 5 YLLLTPGPLTTSRTVKEAMLFDSCTW----DDD--Y--NIGVVEQ----IRQQLTALATA-SEGYTSVLLQGSGSYAVEA 71 (366)
T ss_dssp CEECSSSSCCCCHHHHHTTCCCCCTT----SHH--H--HTTTHHH----HHHHHHHHHCS-SSSEEEEEEESCHHHHHHH
T ss_pred cccccCCCcCCCHHHHHHHhhhhcCC----CHH--H--HHHHHHH----HHHHHHHHhCC-CCcCcEEEEecChHHHHHH
Confidence 47777776678999999997643110 000 0 0022333 44788889993 3211112344556699999
Q ss_pred HHHhhcCCCCEEEEcC-CCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-CCcEEEEcCCC
Q 009673 184 VYTAILKPHDRIMGLD-LPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASA 261 (529)
Q Consensus 184 ~l~all~pGD~Vl~~~-~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-~pklIi~~~s~ 261 (529)
++.++++|||+|++++ +.|++.+. ..+...|. +++.++++ +++.+|+++|++.+++. ++++|++..++
T Consensus 72 ~~~~~~~~gd~vi~~~~~~~~~~~~-------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~ 141 (366)
T 1m32_A 72 VLGSALGPQDKVLIVSNGAYGARMV-------EMAGLMGI--AHHAYDCG-EVARPDVQAIDAILNADPTISHIAMVHSE 141 (366)
T ss_dssp HHHHSCCTTCCEEEEESSHHHHHHH-------HHHHHHTC--CEEEEECC-TTSCCCHHHHHHHHHHCTTCCEEEEESEE
T ss_pred HHHHhcCCCCeEEEEeCCCccHHHH-------HHHHHhCC--ceEEEeCC-CCCCCCHHHHHHHHhcCCCeEEEEEeccc
Confidence 9999999999988776 43332110 11223354 55566665 45789999999999874 58898888777
Q ss_pred CCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHh
Q 009673 262 YPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (529)
Q Consensus 262 ~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~ 338 (529)
||+ ..|+++|.++|++||+++|+|++|..|....+... .+.|++++|+||++.||.| |++++++ ++.+
T Consensus 142 nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~---~~~di~~~s~~K~~~~~~g~G~~~~~~------~~~~ 212 (366)
T 1m32_A 142 TTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAA---LHIDYLISSANKCIQGVPGFAFVIARE------QKLA 212 (366)
T ss_dssp TTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTT---TTCSEEEEESSSTTCCCSSEEEEEEEH------HHHT
T ss_pred CCcceecCHHHHHHHHHHcCCEEEEECCccccCcCccccc---cCccEEEecCcccccCCCceEEEEECH------HHHH
Confidence 765 78999999999999999999999876644222110 1479999999999988877 9999998 6666
Q ss_pred hhcccccC-----------------CCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhcCcEEecC
Q 009673 339 AINNAVFP-----------------GLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSG 400 (529)
Q Consensus 339 ~i~~~~~p-----------------~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~G~~v~~~ 400 (529)
++.....+ ...++++...++++..+++.....+ +++..+++.++++++.+.|++.|+.+..+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 292 (366)
T 1m32_A 213 ACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLD 292 (366)
T ss_dssp TCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSC
T ss_pred hhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCCCeeccC
Confidence 55432100 0124566667777777777654333 67788899999999999998888876643
Q ss_pred C--CCCceEEEccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 401 G--SDNHLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 401 g--t~~~~~~v~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
. ..++++++.+.. .+.+..++.+.|.++||.+..+. . ..++++||+++..+ +++|++++++.|++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~----~--~~~~~iRi~~~~~~----~~~~i~~~~~~l~~~~ 362 (366)
T 1m32_A 293 DELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGK----V--SQSDCFRIGNIGEV----YAADITALLTAIRTAM 362 (366)
T ss_dssp GGGBCSSEEEEECCCCTTCCHHHHHHHHHHTTEECEECC----C--SSSCEEEEECCSSC----CHHHHHHHHHHHHHHC
T ss_pred chhcCceEEEEEcCccCCCCHHHHHHHHHHCCEEEECCc----C--CCCCEEEEecCCCC----CHHHHHHHHHHHHHHH
Confidence 1 123466776642 14567788888888899985432 1 24578999987543 4899999999998765
Q ss_pred H
Q 009673 478 E 478 (529)
Q Consensus 478 ~ 478 (529)
.
T Consensus 363 ~ 363 (366)
T 1m32_A 363 Y 363 (366)
T ss_dssp T
T ss_pred H
Confidence 3
No 25
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.95 E-value=9.8e-27 Score=241.58 Aligned_cols=333 Identities=17% Similarity=0.104 Sum_probs=227.0
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.|+|..+++. +++.+.+++...+.... .+|+. .....++++...+++.+.+|++.+. -+|.+++|+ +
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~------~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~g~~~ 102 (385)
T 1b5p_A 32 DLVALTAGEPDFDTPEHVKEAARRALAQGK-TKYAP------PAGIPELREALAEKFRRENGLSVTP--EETIVTVGGSQ 102 (385)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSCCC------TTCCHHHHHHHHHHHHHTTCCCCCG--GGEEEESHHHH
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHHhCCCCCh--HHEEEcCChHH
Confidence 56888777763 57899999887765432 13332 1113456666667777777864321 145567766 9
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
|+..++.++++|||+|++++|.|.++. ..+...|. +++.+++++ +++.+|+++|++++++ ++++|+++
T Consensus 103 al~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 171 (385)
T 1b5p_A 103 ALFNLFQAILDPGDEVIVLSPYWVSYP--------EMVRFAGG--VVVEVETLPEEGFVPDPERVRRAITP-RTKALVVN 171 (385)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTHHH--------HHHHHTTC--EEEEEECCGGGTTCCCHHHHHTTCCT-TEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEcCCCchhHH--------HHHHHcCC--EEEEeecCcccCCCCCHHHHHHhcCC-CCEEEEEe
Confidence 999999999999999999999875432 12334565 666777764 3578999999999987 78999998
Q ss_pred CCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC----cccEEEecccccc--cCCCCeEEEee
Q 009673 259 ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSL--RGPRGGMIFFK 327 (529)
Q Consensus 259 ~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~aDiv~~S~hK~l--~GprgG~i~~~ 327 (529)
+++||+ .. ++++|.++|++||++||+|++|.. +...+ ...++. ..+++++|+||++ +|+|.||++++
T Consensus 172 ~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~-~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~ 249 (385)
T 1b5p_A 172 SPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEH-LLYEG-EHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGP 249 (385)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBSSS-CCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECC
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchh-cccCC-CCCCHHHcCCCCEEEEEechhhcCCcccceEEEEeC
Confidence 899987 44 488999999999999999999653 33322 111111 3468899999987 68889999998
Q ss_pred CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHH---hcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCC
Q 009673 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH---AQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 404 (529)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~---~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~ 404 (529)
+ ++.+.+......+..+.+...+.+ +..+++. . ...+++..+++.++++.+.+.|++.|+.+..+ ..+
T Consensus 250 ~------~~~~~l~~~~~~~~~~~~~~~~~a-~~~~l~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~ 320 (385)
T 1b5p_A 250 K------EVIKAMASVSRQSTTSPDTIAQWA-TLEALTNQEAS-RAFVEMAREAYRRRRDLLLEGLTALGLKAVRP-SGA 320 (385)
T ss_dssp H------HHHHHHHHHHHTTTCSCCHHHHHH-HHHHHHCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC-SBT
T ss_pred H------HHHHHHHHHHhhccCCCCHHHHHH-HHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-Cee
Confidence 7 676666543333333343343333 3335542 1 13356777888899999999998878876654 234
Q ss_pred ceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 405 HLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 405 ~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
++.|+++...+.+..++.+.|.++||.+..+...+ .++++||++. .+++++++..+.|.+++
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~-----~~~~iRis~~------~~~~~i~~~l~~l~~~l 382 (385)
T 1b5p_A 321 FYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFA-----AFGHVRLSYA------TSEENLRKALERFARVL 382 (385)
T ss_dssp TEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGT-----CTTEEEEECC------SCHHHHHHHHHHGGGGC
T ss_pred EEEEEecCCCCCCHHHHHHHHHHCCeEEecccccC-----CCCeEEEEec------CCHHHHHHHHHHHHHHH
Confidence 55677775445677778777779999985432111 1578999964 35788888887776654
No 26
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.95 E-value=6.3e-26 Score=234.58 Aligned_cols=328 Identities=16% Similarity=0.049 Sum_probs=227.3
Q ss_pred EecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH
Q 009673 107 LIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (529)
Q Consensus 107 L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~ 186 (529)
+......+++.+.+++...+.+.+. .+. ......+++..+++++++++|++.++ .+.+.+|++|+..++.
T Consensus 35 ~~~~~~~~~~~v~~a~~~~~~~~~~--~~~-----~~~~~~~~~~~l~~~la~~~~~~~~~---i~~~~ggt~a~~~~~~ 104 (397)
T 3f9t_A 35 FGSMCSNVLPITRKIVDIFLETNLG--DPG-----LFKGTKLLEEKAVALLGSLLNNKDAY---GHIVSGGTEANLMALR 104 (397)
T ss_dssp CSCSCCCCCTHHHHHHHHHTTCCTT--SGG-----GBHHHHHHHHHHHHHHHHHTTCTTCE---EEEESCHHHHHHHHHH
T ss_pred EEEecCCCcHHHHHHHHHHHhhcCC--Ccc-----cChhHHHHHHHHHHHHHHHhCCCCCC---EEEecCcHHHHHHHHH
Confidence 3334456788999999887754332 111 11234566667789999999998752 2344566699999999
Q ss_pred hhcCC-------------CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCc
Q 009673 187 AILKP-------------HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK 253 (529)
Q Consensus 187 all~p-------------GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pk 253 (529)
++.++ ||+|++.++.|.+.. ..+...|. +++.++++ +++.+|+++|++.+++.+++
T Consensus 105 ~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~ 173 (397)
T 3f9t_A 105 CIKNIWREKRRKGLSKNEHPKIIVPITAHFSFE--------KGREMMDL--EYIYAPIK-EDYTIDEKFVKDAVEDYDVD 173 (397)
T ss_dssp HHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHH--------HHHHHHTC--EEEEECBC-TTSSBCHHHHHHHHHHSCCC
T ss_pred HHHHHHHhhhhhcccCCCCeEEEECCcchhHHH--------HHHHHcCc--eeEEEeeC-CCCcCCHHHHHHHHhhcCCe
Confidence 98766 999999999876542 12334454 66777776 46889999999999876789
Q ss_pred EEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccccccc-------CCCCC---cccEEEecccccccC-CC
Q 009673 254 LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-------ADPFK---YCDVVTTTTHKSLRG-PR 320 (529)
Q Consensus 254 lIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-------~~~~~---~aDiv~~S~hK~l~G-pr 320 (529)
+|+++.++||+ ..|+++|.++|++||++||+|++|..+....... ..++. ++|++++|+||++.+ .+
T Consensus 174 ~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~~~ 253 (397)
T 3f9t_A 174 GIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHCPIP 253 (397)
T ss_dssp EEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCCCSS
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccccCCeEEEccccccCCCCC
Confidence 88888777776 7799999999999999999999987554322110 01221 578999999999844 46
Q ss_pred CeEEEeeCCCcchhHHHhhhcccccCCC--------CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673 321 GGMIFFKKDPVLGVELESAINNAVFPGL--------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (529)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~--------~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~ 392 (529)
.|+++++++ .+.+.+... .+.. .+++....+.++.+++..+...++++..+++.++++++.+.|++
T Consensus 254 ~g~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 327 (397)
T 3f9t_A 254 SGGILFKDI-----GYKRYLDVD-APYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKE 327 (397)
T ss_dssp CEEEEESSG-----GGGGGTCEE-CTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCH-----HHHHhhccC-CccccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688888774 454444321 1111 12322223444444555444456688889999999999999999
Q ss_pred cCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673 393 LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 472 (529)
Q Consensus 393 ~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~ 472 (529)
.|+.++.+. ..+++++.+. +..++.+.|.+.||.+.... .++++||+++.. .+++|++++++.
T Consensus 328 ~g~~~~~~~-~~~~~~~~~~----~~~~~~~~l~~~gi~v~~~~--------~~~~~Ri~~~~~----~~~e~i~~~~~~ 390 (397)
T 3f9t_A 328 NNFKPVIEP-ILNIVAIEDE----DYKEVCKKLRDRGIYVSVCN--------CVKALRIVVMPH----IKREHIDNFIEI 390 (397)
T ss_dssp TTCCBSSCC-SSSEEEEECT----THHHHHHHHHHTTCBCEECS--------SSSEEEEECCTT----CCHHHHHHHHHH
T ss_pred CCCEEEcCC-CccEEEEEeC----CHHHHHHHHHhCCeEEeccC--------CCCEEEEEEcCC----CCHHHHHHHHHH
Confidence 888866542 3455666554 25678888888899885431 257999998643 358999999999
Q ss_pred HHHHHH
Q 009673 473 IHEGVE 478 (529)
Q Consensus 473 i~~~~~ 478 (529)
|+++++
T Consensus 391 l~~~l~ 396 (397)
T 3f9t_A 391 LNSIKR 396 (397)
T ss_dssp HHHHC-
T ss_pred HHHhhC
Confidence 988754
No 27
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.95 E-value=1.8e-26 Score=239.65 Aligned_cols=331 Identities=12% Similarity=0.060 Sum_probs=229.3
Q ss_pred eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC-hHHHHHH
Q 009673 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPANFE 183 (529)
Q Consensus 105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s-Gs~A~~~ 183 (529)
+.+.++...+++.|++++...+.+.| ..+.+.....+++.+++++|.+++. +|.+++ |++|+..
T Consensus 20 ~~~~~~p~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~~~~~~~---~v~~~~g~t~al~~ 84 (396)
T 2ch1_A 20 IMMGPGPSNCSKRVLTAMTNTVLSNF------------HAELFRTMDEVKDGLRYIFQTENRA---TMCVSGSAHAGMEA 84 (396)
T ss_dssp BCCSSSSCCCCHHHHHHTTSCCCCTT------------CHHHHHHHHHHHHHHHHHHTCCCSC---EEEESSCHHHHHHH
T ss_pred eeecCCCCCCCHHHHHHhccccccCC------------ChhHHHHHHHHHHHHHHHhCCCCCc---EEEECCcHHHHHHH
Confidence 44445555678999999876553222 1222333334568899999998641 343444 5699999
Q ss_pred HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (529)
Q Consensus 184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p 263 (529)
++.++++|||+|+++++.|.++... ..+...|. +++.++++ +++.+|+++|++.+++.++++|++++++||
T Consensus 85 ~~~~~~~~gd~vl~~~~~~~~~~~~------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~np 155 (396)
T 2ch1_A 85 MLSNLLEEGDRVLIAVNGIWAERAV------EMSERYGA--DVRTIEGP-PDRPFSLETLARAIELHQPKCLFLTHGDSS 155 (396)
T ss_dssp HHHHHCCTTCEEEEEESSHHHHHHH------HHHHHTTC--EEEEEECC-TTSCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred HHHHhcCCCCeEEEEcCCcccHHHH------HHHHHcCC--ceEEecCC-CCCCCCHHHHHHHHHhCCCCEEEEECCCCC
Confidence 9999999999999999877553100 11233454 56666665 367899999999998657999999888777
Q ss_pred C--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHHh
Q 009673 264 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (529)
Q Consensus 264 ~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~ 338 (529)
+ ..|+++|.++|+++|+++|+|++|..|... ..+. ++|++++|+||++.|+.| |++++++ ++.+
T Consensus 156 tG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~-----~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~------~~~~ 224 (396)
T 2ch1_A 156 SGLLQPLEGVGQICHQHDCLLIVDAVASLCGVP-----FYMDKWEIDAVYTGAQKVLGAPPGITPISISP------KALD 224 (396)
T ss_dssp TTEECCCTTHHHHHHHTTCEEEEECTTTBTTBC-----CCTTTTTCCEEECCCC-CCCCCSSCEEEEECH------HHHH
T ss_pred CceecCHHHHHHHHHHcCCEEEEEccccccCCc-----cchhhcCcCEEEEcCCccccCCCCeEEEEECH------HHHH
Confidence 6 678999999999999999999998765432 1222 479999999999887766 9999987 4544
Q ss_pred hhccc-------c---------c------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcE
Q 009673 339 AINNA-------V---------F------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK 396 (529)
Q Consensus 339 ~i~~~-------~---------~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~ 396 (529)
.+... . + ....++++...++++..+++.....++++..+++.++++++.+.|.+.|++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 304 (396)
T 2ch1_A 225 VIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLD 304 (396)
T ss_dssp HHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred hhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 43211 0 0 112355666666666667776543456788889999999999999888888
Q ss_pred EecCCC---CCceEEEccCCCCCcHHHHHHhHhc-CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673 397 LVSGGS---DNHLVLVDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 472 (529)
Q Consensus 397 v~~~gt---~~~~~~v~~~~~~i~~~~~~~~L~~-~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~ 472 (529)
++.+.. ...++++.+. .+++..++.+.|.+ +||.+..+.. +..++++||++..++ .+++|++++++.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~~~gi~v~~g~~-----~~~~~~iRi~~~~~~---~~~e~i~~~~~~ 375 (396)
T 2ch1_A 305 IFVKDPRHRLPTVTGIMIP-KGVDWWKVSQYAMNNFSLEVQGGLG-----PTFGKAWRVGIMGEC---STVQKIQFYLYG 375 (396)
T ss_dssp BSSCSGGGBCTTEEEEECC-TTCCHHHHHHHHHHHHCBCCBCCCG-----GGTTTEEEEECCGGG---CSHHHHHHHHHH
T ss_pred eccCCccccCCceEEEEcC-CCCCHHHHHHHHHHhCCEEEecCcc-----ccCCCEEEEECCCCc---CCHHHHHHHHHH
Confidence 765421 1124555553 35677777777754 6999854321 123578999973322 358999999999
Q ss_pred HHHHHHH
Q 009673 473 IHEGVEI 479 (529)
Q Consensus 473 i~~~~~~ 479 (529)
|+++++.
T Consensus 376 l~~~l~~ 382 (396)
T 2ch1_A 376 FKESLKA 382 (396)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998764
No 28
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.95 E-value=1.8e-26 Score=239.34 Aligned_cols=357 Identities=13% Similarity=0.065 Sum_probs=237.5
Q ss_pred cccCChHHHHHHHHHHHHhhcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673 83 LGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (529)
Q Consensus 83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~ 160 (529)
+....+..+..+.+...+..+.|+|..+++. .++.+.+++...+.+.. .+|+. .....++++...+++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~------~~g~~~l~~~la~~~~~~ 79 (389)
T 1gd9_A 7 LELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGL-THYGP------NIGLLELREAIAEKLKKQ 79 (389)
T ss_dssp HHHSCCCHHHHHHHHHHTCSSCEECCCCSCSSCCCHHHHHHHHHHHHTTC-CSCCC------TTCCHHHHHHHHHHHHHH
T ss_pred hHhCChhHHHHHHHHHhhhcCeEecCCCCCCCCCCHHHHHHHHHHHhCCC-CCCCC------CCCcHHHHHHHHHHHHHH
Confidence 3444444333333333322467888877753 57899999988775421 23332 112346676666777777
Q ss_pred cCC--CCCCCcee-eecCC-hHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-C
Q 009673 161 FNL--DENKWGVN-VQPLS-GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-T 235 (529)
Q Consensus 161 ~g~--~~~~~~~~-V~~~s-Gs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~ 235 (529)
+|. +++ + |.+++ |++|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++++ +
T Consensus 80 ~g~~~~~~----~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~ 145 (389)
T 1gd9_A 80 NGIEADPK----TEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAP--------AVILAGG--KPVEVPTYEEDE 145 (389)
T ss_dssp HCCCCCTT----TSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHH--------HHHHHTC--EEEEEECCGGGT
T ss_pred hCCCCCCC----CeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHCCC--EEEEeccCCccC
Confidence 785 343 2 34455 4599999999999999999999998865421 2334454 5666666542 4
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccc-cCC--CC---Cc
Q 009673 236 GLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VAD--PF---KY 304 (529)
Q Consensus 236 ~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~--~~---~~ 304 (529)
+.+|+++|++.+++ ++++|++++++||+ .. ++++|.++|++||+++|+|++|..+.. .+. ... .+ ..
T Consensus 146 ~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~ 223 (389)
T 1gd9_A 146 FRLNVDELKKYVTD-KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIY-DDARHYSIASLDGMFE 223 (389)
T ss_dssp TCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBC-TTCCCCCGGGSTTCGG
T ss_pred CCCCHHHHHHhcCc-CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhccc-CCCCCCCHhhccCCCC
Confidence 67999999999987 78999888888876 34 589999999999999999999765432 221 111 11 24
Q ss_pred ccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHH
Q 009673 305 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVS 381 (529)
Q Consensus 305 aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~ 381 (529)
.|++++|+||++ +|.|.|++++++ ++.+.+.........+. +....+++..+++..... .+++..+++.+
T Consensus 224 ~~i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 296 (389)
T 1gd9_A 224 RTITVNGFSKTFAMTGWRLGFVAAPS------WIIERMVKFQMYNATCP-VTFIQYAAAKALKDERSWKAVEEMRKEYDR 296 (389)
T ss_dssp GEEEEEESTTTTTCGGGCCEEEECCH------HHHHHHHHHHTTTTCSC-CHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CEEEEecChhhcCCcccceEEEEECH------HHHHHHHHHHhhhccCC-CHHHHHHHHHHHhCCCcchHHHHHHHHHHH
Confidence 689999999997 567889999987 67776655433222333 333344444455432111 34677788889
Q ss_pred HHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCC
Q 009673 382 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG 460 (529)
Q Consensus 382 ~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g 460 (529)
+++.+.+.|++.|+++..+. .++++++++...+.+..++.+.|. ++||.+..+..++ +..++++||++..
T Consensus 297 ~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRi~~~~----- 367 (389)
T 1gd9_A 297 RRKLVWKRLNEMGLPTVKPK-GAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFG---KAGEGYVRISYAT----- 367 (389)
T ss_dssp HHHHHHHHHHHTTCCCCCCC-BTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGC---GGGTTBEEEECCS-----
T ss_pred HHHHHHHHHHHcCCeecCCC-eeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhC---CCCCCeEEEEecC-----
Confidence 99999999988888776532 244566666432456777777775 8999986543221 1135789999652
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 009673 461 FSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 461 ~~~~d~~~la~~i~~~~~~ 479 (529)
++++++++++.|.++++.
T Consensus 368 -~~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 368 -AYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp -CHHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHHh
Confidence 589999999999888753
No 29
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.95 E-value=5.2e-27 Score=243.11 Aligned_cols=338 Identities=15% Similarity=0.125 Sum_probs=232.7
Q ss_pred cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-HH
Q 009673 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SP 179 (529)
Q Consensus 103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s~ 179 (529)
+.|+|..+++ .+++.|++++...+.+. ..+|+. . ..++++.+++++++.+|.+.+. .+|.+++| ++
T Consensus 28 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~------~--~~~l~~~la~~l~~~~g~~~~~--~~i~~~~g~~~ 96 (391)
T 3dzz_A 28 KELPMWIAEMDFKIAPEIMASMEEKLKVA-AFGYES------V--PAEYYKAVADWEEIEHRARPKE--DWCVFASGVVP 96 (391)
T ss_dssp TCEECCSSCCSSCCCHHHHHHHHHHHTTC-CCCCBC------C--CHHHHHHHHHHHHHHHSCCCCG--GGEEEESCHHH
T ss_pred CceeccccCCCCCCCHHHHHHHHHHHhcC-cCCCCC------C--CHHHHHHHHHHHHHHhCCCCCH--HHEEECCCHHH
Confidence 5688877665 36899999999887542 122322 1 2466667778999999944221 14455666 59
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC--CCCCCCCHHHHHHHhhhcCCcEEEE
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD--ESTGLVDYDMLEKTAILFRPKLIIA 257 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~--~~~~~iD~d~le~~i~~~~pklIi~ 257 (529)
|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++ ..++.+|+++|+++++..++++|++
T Consensus 97 a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i 166 (391)
T 3dzz_A 97 AISAMVRQFTSPGDQILVQEPVYNMFYS--------VIEGNGR--RVISSDLIYENSKYSVNWADLEEKLATPSVRMMVF 166 (391)
T ss_dssp HHHHHHHHHSCTTCEEEECSSCCHHHHH--------HHHHTTC--EEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEE
T ss_pred HHHHHHHHhCCCCCeEEECCCCcHHHHH--------HHHHcCC--EEEEeeeeecCCceeecHHHHHHHHhccCceEEEE
Confidence 9999999999999999999988765421 2334454 66677664 2235699999999998448999999
Q ss_pred cCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-----ccc--EEEecccccc--cCCCCeE
Q 009673 258 GASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-----YCD--VVTTTTHKSL--RGPRGGM 323 (529)
Q Consensus 258 ~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-----~aD--iv~~S~hK~l--~GprgG~ 323 (529)
+.++||+ . .++++|.++|++||+++|+|++|.. +...+....++. ..| ++++|+||++ +|+|.|+
T Consensus 167 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~ 245 (391)
T 3dzz_A 167 CNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGD-LVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAAC 245 (391)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEE
T ss_pred ECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEeccccc-ccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheE
Confidence 8888886 4 4789999999999999999999753 333332222221 256 8999999996 6788899
Q ss_pred EEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEecCC
Q 009673 324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSGG 401 (529)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~~g 401 (529)
++++++ ++.+.+..........+++...++++..+++.. ....++..+++.++++.+.+.|++. |+.+..+.
T Consensus 246 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 319 (391)
T 3dzz_A 246 AIIPNP-----DLRARAEESFFLAGIGEPNLLAIPAAIAAYEEG-HDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSN 319 (391)
T ss_dssp EECCSH-----HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCC
T ss_pred EEECCH-----HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccC
Confidence 999742 676666543211111123333444444566552 2235778888899999999999884 88877542
Q ss_pred CCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 402 SDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 402 t~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.+++.++++...+.+..++.+.| +++||.+..+...+ ...++.+||++. .++++++++++.|.++++
T Consensus 320 -~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~------~~~~~i~~~l~~l~~~l~ 387 (391)
T 3dzz_A 320 -ASYLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYR---GNGHEFVRINLA------CPKELVIDGMQRLKQGVL 387 (391)
T ss_dssp -BSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGC---TTGGGEEEEECC------SCHHHHHHHHHHHHHHHH
T ss_pred -ceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 34556677765456777888877 58999996543211 223578999965 358999999999998875
No 30
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.95 E-value=1.3e-26 Score=241.68 Aligned_cols=340 Identities=14% Similarity=0.075 Sum_probs=233.3
Q ss_pred ceeEecCCC-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-HHHH
Q 009673 104 SLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPAN 181 (529)
Q Consensus 104 ~i~L~asen-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s~A~ 181 (529)
.+.|..+.+ ++++.|++++...+.+.+ +.+...|..+.. .......+++++++++|++++ +|.+++| ++++
T Consensus 27 ~~~ld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~al 99 (406)
T 3cai_A 27 WVHFDAPAGMLIPDSVATTVSTAFRRSG--ASTVGAHPSARR-SAAVLDAAREAVADLVNADPG----GVVLGADRAVLL 99 (406)
T ss_dssp CEECBGGGCCCCCHHHHHHHHHHHHHCC--SSSCSSSHHHHH-HHHHHHHHHHHHHHHHTCCGG----GEEEESCHHHHH
T ss_pred eEEEeCCCcCCCCHHHHHHHHHHHHhcC--CCCCCccHHHHH-HHHHHHHHHHHHHHHhCCCCC----eEEEeCChHHHH
Confidence 466655443 678999999998876433 223223311111 123333456889999999754 2344555 5888
Q ss_pred HHHHHhh---cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 182 FEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 182 ~~~l~al---l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
..++.++ ++|||+|++++++|.++...... .....|. +++.++++++++.+|+++|++.+++ ++++|+++
T Consensus 100 ~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~----~~~~~g~--~v~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 172 (406)
T 3cai_A 100 SLLAEASSSRAGLGYEVIVSRLDDEANIAPWLR----AAHRYGA--KVKWAEVDIETGELPTWQWESLISK-STRLVAVN 172 (406)
T ss_dssp HHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHH----HHHHHBC--EEEEECCCTTTCCCCGGGHHHHCCT-TEEEEEEE
T ss_pred HHHHHHHhhccCCCCEEEEcCCccHHHHHHHHH----HHHhcCC--eEEEEecCcccCCcCHHHHHHHhCC-CceEEEEe
Confidence 8888887 79999999999988765321100 0011343 6777777655788999999999987 89999998
Q ss_pred CCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCe-EEEeeCCCcchhH
Q 009673 259 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG-MIFFKKDPVLGVE 335 (529)
Q Consensus 259 ~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG-~i~~~~~~~~~~~ 335 (529)
+++||+ ..|+++|.++|+++|++||+|++|..|....+... .++|++++|+||++ ||++| ++++++ +
T Consensus 173 ~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~---~~~d~~~~s~~K~~-g~~~G~~~~~~~------~ 242 (406)
T 3cai_A 173 SASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRE---TDADVVTVNAHAWG-GPPIGAMVFRDP------S 242 (406)
T ss_dssp SBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHH---HCCSEEEEEGGGGT-SCSCEEEEESCH------H
T ss_pred CCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchh---cCCCEEEeehhhhc-CCCcCeEEEEeh------H
Confidence 888775 78999999999999999999999886644221110 04799999999986 67788 999987 6
Q ss_pred HHhhhccccc--------CCCCCCChHHHHHHHHHHHHHhcCc--------------hHHHHHHHHHHHHHHHHHHHHhc
Q 009673 336 LESAINNAVF--------PGLQGGPHNHTIGGLAVCLKHAQSP--------------EFKVYQNKVVSNCRALASRLVEL 393 (529)
Q Consensus 336 l~~~i~~~~~--------p~~~g~p~~~~iaala~al~~~~~~--------------~~~~~~~~i~~~a~~l~~~L~~~ 393 (529)
+.+++..... ....++++...++++..+++..... .+++..+++.++++++.+.|++.
T Consensus 243 ~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 322 (406)
T 3cai_A 243 VMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSL 322 (406)
T ss_dssp HHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 7766654321 0114667777777777777765432 25777888889999999999884
Q ss_pred -CcEEecCC-CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCC------CCCCCCCCCCeEEEccCCCccCCCCHHH
Q 009673 394 -GYKLVSGG-SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV------PGDKSALVPGGIRIGSPAMTTRGFSEKE 465 (529)
Q Consensus 394 -G~~v~~~g-t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~------Pg~~~~~~~~~iRig~~~~tt~g~~~~d 465 (529)
|+.+..+. ....++++.+. +.+..++.+.|.++||.+..+.. .|. +...+.+||++...+ +++|
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~--~~~~~~iRis~~~~~----t~e~ 394 (406)
T 3cai_A 323 PLVMLIGRPEAQIPVVSFAVH--KVPADRVVQRLADNGILAIANTGSRVLDVLGV--NDVGGAVTVGLAHYS----TMAE 394 (406)
T ss_dssp TTEEECCCCSSBCSEEEEEET--TBCHHHHHHHHHHTTEECEECCSCHHHHHHTT--TTTTCCEEEECCTTC----CHHH
T ss_pred CCeEEcCCccccCCEEEEEEC--CcCHHHHHHHHHHCCcEEecCChHHHHHHcCC--CCCCCeEEEEeecCC----CHHH
Confidence 88876542 12234455543 35677888888889999865420 010 012468999987544 4899
Q ss_pred HHHHHHHHHH
Q 009673 466 FVAIADFIHE 475 (529)
Q Consensus 466 ~~~la~~i~~ 475 (529)
++++++.|++
T Consensus 395 i~~~~~~l~~ 404 (406)
T 3cai_A 395 VDQLVRALAS 404 (406)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9999998864
No 31
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.95 E-value=1.5e-26 Score=239.99 Aligned_cols=332 Identities=13% Similarity=0.087 Sum_probs=229.4
Q ss_pred eeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673 105 LELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (529)
Q Consensus 105 i~L~-asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~ 183 (529)
+.|. ++...+++.|++++...+.+. +++ .. .......++++++++|++++. .+...+|++|+..
T Consensus 10 ~yl~~~~~~~~~~~v~~a~~~~~~~~--------~~~---~~-~~~~~~l~~~la~~~g~~~~~---v~~t~g~t~a~~~ 74 (392)
T 2z9v_A 10 VITLTAGPVNAYPEVLRGLGRTVLYD--------YDP---AF-QLLYEKVVDKAQKAMRLSNKP---VILHGEPVLGLEA 74 (392)
T ss_dssp SEECSSSCCCCCHHHHHHTTSCCCCT--------TSH---HH-HHHHHHHHHHHHHHTTCSSCC---EEESSCTHHHHHH
T ss_pred ceeecCCCcCCCHHHHHHHhcccccc--------ccH---HH-HHHHHHHHHHHHHHhCCCCCE---EEEeCCchHHHHH
Confidence 4443 344568999999998765431 111 11 222234568899999997542 2334555699999
Q ss_pred HHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh-cCCcEEEEcCCCC
Q 009673 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-FRPKLIIAGASAY 262 (529)
Q Consensus 184 ~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~-~~pklIi~~~s~~ 262 (529)
++.++++|||+|+++++.|.++. +. ......|. +++.+++++ ++.+|+++|++.+++ .++++|++++++|
T Consensus 75 ~~~~~~~~gd~Vl~~~~~~~~~~---~~---~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~~n 145 (392)
T 2z9v_A 75 AAASLISPDDVVLNLASGVYGKG---FG---YWAKRYSP--HLLEIEVPY-NEAIDPQAVADMLKAHPEITVVSVCHHDT 145 (392)
T ss_dssp HHHHHCCTTCCEEEEESSHHHHH---HH---HHHHHHCS--CEEEEECCT-TSCCCHHHHHHHHHHCTTCCEEEEESEEG
T ss_pred HHHHhcCCCCEEEEecCCcccHH---HH---HHHHHcCC--ceEEeeCCC-CCCCCHHHHHHHHhcCCCCcEEEEeccCC
Confidence 99999999999999998764431 10 01122344 556666663 467999999999953 2789999988887
Q ss_pred CC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhh
Q 009673 263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 339 (529)
Q Consensus 263 p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~ 339 (529)
|+ ..|+++|.++|+++|+++|+|++|..|....+... .++|++++|+||++.|+.| |++++++ ++.++
T Consensus 146 ptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~---~~~d~~~~s~sK~~~~~~g~G~l~~~~------~~~~~ 216 (392)
T 2z9v_A 146 PSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPED---CKADIYVTGPNKCLGAPPGLTMMGVSE------RAWAK 216 (392)
T ss_dssp GGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGG---GTCSEEEECSSSTTCCCSCCEEEEECH------HHHHH
T ss_pred CCceeccHHHHHHHHHHcCCeEEEEcccccCCccccccc---ccceEEEecCcccccCCCceeEEEECH------HHHHH
Confidence 75 78999999999999999999999876643221110 0479999999999888777 9999987 56555
Q ss_pred hcccc-------------------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec-
Q 009673 340 INNAV-------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS- 399 (529)
Q Consensus 340 i~~~~-------------------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~- 399 (529)
+.... .....++++...++++..+++.....++++..+++.++++++.+.|++.|+++..
T Consensus 217 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 296 (392)
T 2z9v_A 217 MKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMGLSVWAA 296 (392)
T ss_dssp HHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSS
T ss_pred hhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcCCeeccC
Confidence 43210 0122456777777777777776543346788889999999999999888887765
Q ss_pred CC--CCCceEEEccCCCCCcHHHHHHhHhcC-CeEEcCCCCCCCCCCCCCCeEEEccCC-CccCCCCHHHHHHHHHHHHH
Q 009673 400 GG--SDNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPA-MTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 400 ~g--t~~~~~~v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~Pg~~~~~~~~~iRig~~~-~tt~g~~~~d~~~la~~i~~ 475 (529)
+. ...+++++.+. .+.+..++.+.|.+. ||.+..+.. +..++++||++.. . .+++|++++++.|++
T Consensus 297 ~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~~gi~v~~g~~-----~~~~~~lRi~~~~~~----~~~~~i~~~~~~l~~ 366 (392)
T 2z9v_A 297 SDSIASPTTTAVRTP-DGVDEKALRQAARARYGVVFSSGRG-----ETLGKLTRIGHMGPT----AQPIYAIAALTALGG 366 (392)
T ss_dssp SGGGBCTTEEEEECC-TTCCHHHHHHHHHHHHCEECEECCG-----GGTTTEEEEECCGGG----CSHHHHHHHHHHHHH
T ss_pred CccccCCceEEEECC-CCCCHHHHHHHHHhcCCEEEecCCC-----CCCCCeEEEeCcccc----cCHHHHHHHHHHHHH
Confidence 21 12455566653 345677788888775 999854321 1235789999532 2 358999999999998
Q ss_pred HHHH
Q 009673 476 GVEI 479 (529)
Q Consensus 476 ~~~~ 479 (529)
+++.
T Consensus 367 ~~~~ 370 (392)
T 2z9v_A 367 AMNA 370 (392)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8753
No 32
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.95 E-value=6.4e-26 Score=232.06 Aligned_cols=318 Identities=12% Similarity=0.069 Sum_probs=230.1
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.|+|..++|+ +++.|++++...+... .+|| .....++ ++++++++|++++ +|.+++|+ +
T Consensus 17 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~-------~~~~~~l----~~~la~~~~~~~~----~i~~~~g~~~ 79 (354)
T 3ly1_A 17 NPIRINFNENPLGMSPKAQAAARDAVVKA--NRYA-------KNEILML----GNKLAAHHQVEAP----SILLTAGSSE 79 (354)
T ss_dssp SCEECSSCCCSSCCCHHHHHHHHHTGGGT--TSCC-------HHHHHHH----HHHHHHHTTSCGG----GEEEESHHHH
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHhhC--cCCC-------CCchHHH----HHHHHHHhCCChH----HEEEeCChHH
Confidence 56888888875 6899999998877532 2232 1223333 4788899998765 34456665 9
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh-cCCcEEEEc
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-FRPKLIIAG 258 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~-~~pklIi~~ 258 (529)
|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++ +++.+|+++|++.+++ .++++|+++
T Consensus 80 a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~v~l~ 148 (354)
T 3ly1_A 80 GIRAAIEAYASLEAQLVIPELTYGDGEH--------FAKIAGM--KVTKVKML-DNWAFDIEGLKAAVAAYSGPSIVYLV 148 (354)
T ss_dssp HHHHHHHHHCCTTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECCC-TTSCCCHHHHHHHHHTCSSCEEEEEE
T ss_pred HHHHHHHHHhCCCCeEEECCCCchHHHH--------HHHHcCC--EEEEecCC-CCCCCCHHHHHHHhccCCCCCEEEEe
Confidence 9999999999999999999988765421 2334454 67777776 3589999999999983 389999998
Q ss_pred CCCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCCC------cccEEEecccccc--cCCCCeEEEe
Q 009673 259 ASAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK------YCDVVTTTTHKSL--RGPRGGMIFF 326 (529)
Q Consensus 259 ~s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~~------~aDiv~~S~hK~l--~GprgG~i~~ 326 (529)
+++||+ ..+.+++.+|++. +|+++|+|++|. ++...+.....+. ..+++++|+||++ +|+|.|++++
T Consensus 149 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 227 (354)
T 3ly1_A 149 NPNNPTGTITPADVIEPWIASKPANTMFIVDEAYA-EFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVA 227 (354)
T ss_dssp SSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTG-GGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEEC
T ss_pred CCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHH-HhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeec
Confidence 888886 6788888888877 999999999976 3333332222211 2348899999997 6788899999
Q ss_pred eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 406 (529)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~ 406 (529)
++ ++.+.+.....+ .+++....+++..+++.. ..+++..+++.++++.+.+.|.+.|+.+..+ ...+
T Consensus 228 ~~------~~~~~~~~~~~~---~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~ 294 (354)
T 3ly1_A 228 HP------TVIALMGRYVAG---EKINFSGVDAALASMNDS--AFITYSKKSNDVSRQILLKALEDLKLPYLPS--EGNF 294 (354)
T ss_dssp CH------HHHHHHGGGTTC---SCCCHHHHHHHHHHTTCH--HHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC--CSSE
T ss_pred CH------HHHHHHHHhcCC---CCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHHCCCeECCC--CceE
Confidence 77 787777665433 244555555555455422 3457788889999999999998888877643 2455
Q ss_pred EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 407 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 407 ~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+++++.. +..++.+.|.++||.+. +..++ .++++||++. +++|++++++.|+++++
T Consensus 295 ~~~~~~~---~~~~~~~~l~~~gi~v~-g~~~~-----~~~~iRis~~-------~~~~i~~~~~~l~~~l~ 350 (354)
T 3ly1_A 295 VFHQLVV---PLKDYQTHMADAGVLIG-RAFPP-----ADNWCRISLG-------TPQEMQWVADTMREFRK 350 (354)
T ss_dssp EEEECSS---CHHHHHHHHHHTTEECC-CCCTT-----CTTEEEEECC-------CHHHHHHHHHHHHHHHH
T ss_pred EEEECCC---CHHHHHHHHHHCCEEEe-ecCCC-----CCCEEEEEcC-------CHHHHHHHHHHHHHHHH
Confidence 6777753 56788888888999986 43222 3678999953 47999999999998876
No 33
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.95 E-value=4.5e-26 Score=240.17 Aligned_cols=334 Identities=17% Similarity=0.161 Sum_probs=234.9
Q ss_pred ceeEecCCC---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 009673 104 SLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (529)
Q Consensus 104 ~i~L~asen---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~-~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~ 179 (529)
.|++..+++ ..++.|++++...+.. |..++++.++..|. +...+++ +++++++|.+. .+.++||++
T Consensus 66 ~id~~~~~~lg~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~G~~~~~~~l~----~~la~~~g~~~-----~i~~~sGs~ 135 (427)
T 2w8t_A 66 TILLGTYNYMGMTFDPDVIAAGKEALEK-FGSGTCGSRMLNGTFHDHMEVE----QALRDFYGTTG-----AIVFSTGYM 135 (427)
T ss_dssp EEECSCCCTTCGGGCHHHHHHHHHHHHH-HCSCCCSCTTTTCCCHHHHHHH----HHHHHHHTCSE-----EEEESCHHH
T ss_pred EEEEECcccccCCCCHHHHHHHHHHHHH-hCCCCcccccccCCcHHHHHHH----HHHHHHhCCCc-----eEEecCcHH
Confidence 456666643 2679999999887754 44456665555553 4445554 77888888862 466799999
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc---CCcEEE
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLII 256 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~---~pklIi 256 (529)
||..++.+++++||.|++..+.|++... .+...|. +++.++ .+|+++|++.+++. ++++|+
T Consensus 136 a~~~al~~l~~~gd~vl~~~~~h~~~~~--------~~~~~g~--~~~~~~------~~d~~~le~~l~~~~~~~~~~v~ 199 (427)
T 2w8t_A 136 ANLGIISTLAGKGEYVILDADSHASIYD--------GCQQGNA--EIVRFR------HNSVEDLDKRLGRLPKEPAKLVV 199 (427)
T ss_dssp HHHHHHHHHSCTTCEEEEETTCCHHHHH--------HHHHSCS--EEEEEC------TTCHHHHHHHHHTSCSSSCEEEE
T ss_pred HHHHHHHHhcCCCCEEEECCcccHHHHH--------HHHHcCC--eeEEeC------CCCHHHHHHHHHhccCCCCeEEE
Confidence 9999999999999999999988765431 2334454 555554 36899999999764 688999
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccc-ccc-C--CCC-CcccEEEecccccccCCCCeEEEeeCC
Q 009673 257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-SVV-A--DPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (529)
Q Consensus 257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~~~-~--~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~ 329 (529)
++.++|++ ..|+++|+++|++||++||+|++|..|.... +.. . ..+ +.+|++++|+||++ |++||++++++
T Consensus 200 ~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~-g~~gG~v~~~~- 277 (427)
T 2w8t_A 200 LEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSV-GTVGGFVVSNH- 277 (427)
T ss_dssp EESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTT-CSCCEEEEECC-
T ss_pred EcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhh-ccCCCEEEeCH-
Confidence 98776665 7789999999999999999999988765531 100 0 111 25799999999998 58889999987
Q ss_pred CcchhHHHhhhcccccCC-CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673 330 PVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~ 408 (529)
++.+.+.....+. ..++++...++++..+++.+. ..++..+++.++++++.+.|++.|+++..+....++++
T Consensus 278 -----~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 350 (427)
T 2w8t_A 278 -----PKFEAVRLACRPYIFTASLPPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAMGFRLGTETCDSAIVA 350 (427)
T ss_dssp -----TTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHHTCEESCSSCCSSEEE
T ss_pred -----HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCCCEEE
Confidence 5655554331111 123445556666656777653 24677888999999999999988998763221345667
Q ss_pred EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
+.+.. +.+...+.+.|.+.||.+.....|+. +...+.+||+++.. ++++|++++++.|+++++.
T Consensus 351 ~~~~~-~~~~~~l~~~L~~~Gi~v~~~~~~~~--~~~~~~lRi~~~~~----~t~e~i~~~~~~l~~~l~~ 414 (427)
T 2w8t_A 351 VMLED-QEQAAMMWQALLDGGLYVNMARPPAT--PAGTFLLRCSICAE----HTPAQIQTVLGMFQAAGRA 414 (427)
T ss_dssp EEESS-HHHHHHHHHHHHHTTEECEEECTTTS--CTTCEEEEEECCTT----CCHHHHHHHHHHHHHHHHH
T ss_pred EEECC-HHHHHHHHHHHHHCCeEEeeeCCCCC--CCCCeEEEEEeCCC----CCHHHHHHHHHHHHHHHHH
Confidence 76642 22345677778778999876543332 12346899997653 4589999999999998764
No 34
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.95 E-value=2e-26 Score=238.68 Aligned_cols=348 Identities=14% Similarity=0.116 Sum_probs=237.1
Q ss_pred ChHHHHHHHHHHHHhhcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--
Q 009673 87 DPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-- 162 (529)
Q Consensus 87 d~~~~~~~~~e~~~~~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g-- 162 (529)
+..+|+...++. ...+.|+|..+++. +++.|++++...+.+.. .+|+. + ..++++.+++++++.+|
T Consensus 18 g~~~~d~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~-----~---~~~~~~~l~~~l~~~~g~~ 87 (391)
T 4dq6_A 18 FSSKWSEMEKKY-GTNDLLPMWVADMDFKAAPCIIDSLKNRLEQEI-YGYTT-----R---PDSYNESIVNWLYRRHNWK 87 (391)
T ss_dssp TBHHHHCHHHHH-SCSCSEECCSSSCSSCCCHHHHHHHHHHHTTCC-CCCBC-----C---CHHHHHHHHHHHHHHHCCC
T ss_pred Cceeeeeccccc-CCCCceeccccCCCCCCCHHHHHHHHHHHhCCC-CCCCC-----C---CHHHHHHHHHHHHHHhCCC
Confidence 344555433321 12466888877763 57999999988775421 12221 1 24566667789999999
Q ss_pred CCCCCCceeeecCCh-HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-C--CCCCC
Q 009673 163 LDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-E--STGLV 238 (529)
Q Consensus 163 ~~~~~~~~~V~~~sG-s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-~--~~~~i 238 (529)
++++ +|.+++| ++|+..++.++++|||+|++++|.|.++.. .+...|. +++.++++ . .++.+
T Consensus 88 ~~~~----~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~~ 153 (391)
T 4dq6_A 88 IKSE----WLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNS--------VVKNNNR--ELIISPLQKLENGNYIM 153 (391)
T ss_dssp CCGG----GEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHH--------HHHHTTC--EEEECCCEECTTSCEEC
T ss_pred CcHH----HeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHH--------HHHHcCC--eEEeeeeeecCCCceEe
Confidence 4444 3444555 599999999999999999999988765421 2334454 66777765 2 23569
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cc-----c
Q 009673 239 DYDMLEKTAILFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YC-----D 306 (529)
Q Consensus 239 D~d~le~~i~~~~pklIi~~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~a-----D 306 (529)
|+++|++.+++ +++|+++.++||+ . .++++|+++|++||+++|+|++|.. +...+....++. .. .
T Consensus 154 d~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~ 230 (391)
T 4dq6_A 154 DYEDIENKIKD--VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSD-IILKKHKHIPMASISKEFEKNT 230 (391)
T ss_dssp CHHHHHHHCTT--EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBCTTCCCCCGGGSCHHHHHTE
T ss_pred eHHHHHHHhhc--CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccc-cccCCCCccCHHHcCccccCcE
Confidence 99999999977 8999988888886 3 4688999999999999999999754 333332222222 12 2
Q ss_pred EEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (529)
Q Consensus 307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~ 384 (529)
+++.|+||++ +|.|.|+++++++ ++.+.+.........++++....+++..+++.. ....++..+++.++++
T Consensus 231 i~~~s~sK~~g~~G~r~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~ 304 (391)
T 4dq6_A 231 ITCMAPTKTFNIAGLQSSYVVLPDE-----KDYKLLDDAFTRIDIKRNNCFSLVATEASYNNG-ESWLESFLEYLESNID 304 (391)
T ss_dssp EEEECSHHHHTCGGGCCEEEECCSH-----HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHH
T ss_pred EEEEechhhccCcccceEEEEeCCH-----HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhch-HHHHHHHHHHHHHHHH
Confidence 8899999987 6788899998863 566665543222223445555555555566652 2235777888999999
Q ss_pred HHHHHHHh--cCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcC-CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCC
Q 009673 385 ALASRLVE--LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF 461 (529)
Q Consensus 385 ~l~~~L~~--~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~ 461 (529)
.+.+.|++ .|+.+..+ ..+++.|+++...+.+..++.+.|.+. ||.+..+...+ ...++.+||++. .
T Consensus 305 ~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~------~ 374 (391)
T 4dq6_A 305 FAIKYINENMPKLKVRKP-EGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFG---IGGSGYQRINLA------C 374 (391)
T ss_dssp HHHHHHHHHCTTSEECCC-SBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGC---TTCTTEEEEECC------S
T ss_pred HHHHHHHhhCCCCEecCC-CccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhC---CCCCCeEEEEEc------C
Confidence 99999987 38887754 234556677764356777887777666 99986532221 223578999965 3
Q ss_pred CHHHHHHHHHHHHHHH
Q 009673 462 SEKEFVAIADFIHEGV 477 (529)
Q Consensus 462 ~~~d~~~la~~i~~~~ 477 (529)
++++++++++.|.+++
T Consensus 375 ~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 375 PRSMLEEALIRIKNAI 390 (391)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHh
Confidence 5799999999998765
No 35
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.95 E-value=3e-26 Score=238.01 Aligned_cols=338 Identities=12% Similarity=0.071 Sum_probs=225.0
Q ss_pred hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (529)
Q Consensus 102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs- 178 (529)
++.|+|..+++. +++.|++++...+.+.. .+|+. .....++++...+++.+.+|.+.+. .+|.+++|+
T Consensus 31 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~y~~------~~g~~~lr~~ia~~~~~~~g~~~~~--~~v~~t~g~~ 101 (391)
T 3h14_A 31 RRIIHMEVGQPGTGAPRGAVEALAKSLETDA-LGYTV------ALGLPALRQRIARLYGEWYGVDLDP--GRVVITPGSS 101 (391)
T ss_dssp CCCEECCCSSCSSCSCHHHHHHHHHHHC-----------------CCHHHHHHHHHHHHHHHCCCCCG--GGEEEESSHH
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCChHHHHHHHHHHHHHHhCCCCCH--HHEEEecChH
Confidence 467899888764 47899999988775422 23322 1113466666667788888854321 134445554
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEE
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~ 257 (529)
+|+..++.++++|||+|++.+|.|.++. ..+...|. +++.++++++ ++.+|++++++. ++++|++
T Consensus 102 ~al~~~~~~l~~~gd~vl~~~p~~~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~----~~~~v~i 167 (391)
T 3h14_A 102 GGFLLAFTALFDSGDRVGIGAPGYPSYR--------QILRALGL--VPVDLPTAPENRLQPVPADFAGL----DLAGLMV 167 (391)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHHTTC--EEEEEECCGGGTTSCCHHHHTTS----CCSEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCccHH--------HHHHHcCC--EEEEeecCcccCCCCCHHHHHhc----CCeEEEE
Confidence 9999999999999999999998775542 12334554 6666666643 367899999776 7899999
Q ss_pred cCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccc--cCCCCeEEEeeC
Q 009673 258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKK 328 (529)
Q Consensus 258 ~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l--~GprgG~i~~~~ 328 (529)
+.++||+ ..+ +++|.++|++||+++|+|++|. ++...+....... ..+++++|+||++ +|+|.|++++++
T Consensus 168 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 246 (391)
T 3h14_A 168 ASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYH-GIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPE 246 (391)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT-TCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCG
T ss_pred CCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcch-hcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCH
Confidence 8888886 444 8899999999999999999965 3333332111111 3458999999997 678889999987
Q ss_pred CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~ 408 (529)
++.+.+......... +++....+++..+++ ....+++..+++.++++.+.+.|++.|+..+.....+++.+
T Consensus 247 ------~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 317 (391)
T 3h14_A 247 ------DQVRVVERIAQNMFI-CAPHASQVAALAALD--CDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVY 317 (391)
T ss_dssp ------GGHHHHHHHHHHTTC-CCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEE
T ss_pred ------HHHHHHHHHHhhhcc-CCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEE
Confidence 566655443222222 333334333333454 22345778888999999999999887766543333356677
Q ss_pred EccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 409 VDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 409 v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
+++...+.+..++.+.| +++||.+..+..++. +..+++|||++.. +++|++++++.|.++++..
T Consensus 318 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~~~~iRis~~~------~~~~i~~~l~~l~~~~~~~ 382 (391)
T 3h14_A 318 ADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDP--ERGAGTLRFSYAR------ATADIEEGLDRLEAFMQAR 382 (391)
T ss_dssp EECTTTCSCHHHHHHHHHHHHCEECEEGGGTCT--TTGGGEEEEECCS------CHHHHHHHHHHHHHHHHHC
T ss_pred EecCccCCCHHHHHHHHHHHCCEEEcCchhhCC--CCCCCeEEEEecC------CHHHHHHHHHHHHHHHHHh
Confidence 77765456777776664 557999965432221 1235789999653 5799999999999888754
No 36
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.95 E-value=2.2e-26 Score=239.68 Aligned_cols=333 Identities=18% Similarity=0.202 Sum_probs=232.1
Q ss_pred cceeEecCCCC---CcHHHHHHHhhhhhccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673 103 KSLELIASENF---TSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (529)
Q Consensus 103 ~~i~L~asen~---~~~~V~eal~~~l~~~y~~G~p~~r~~~g-~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs 178 (529)
..|++..+... .++.+++++...+. +|..++.+.+|..| .+..++++ +.+++++|++ + .|.+++|+
T Consensus 46 ~~id~~~~~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~-~----~i~~~sGs 115 (401)
T 1fc4_A 46 HVINFCANNYLGLANHPDLIAAAKAGMD-SHGFGMASVRFICGTQDSHKELE----QKLAAFLGME-D----AILYSSCF 115 (401)
T ss_dssp EEEECCCSCTTSCTTCHHHHHHHHHHHH-HHCSCCCSCHHHHCCBHHHHHHH----HHHHHHHTCS-E----EEEESCHH
T ss_pred cEEEeeccCcccccCCHHHHHHHHHHHH-HhCCCCCCCCcccCCcHHHHHHH----HHHHHHhCCC-c----EEEeCChH
Confidence 34676666332 38999999988774 34444444344322 33344444 7788889987 2 46679999
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCc
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPK 253 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pk 253 (529)
+|+..++.++++|||+|++.++.|++++. .+...|. +++.++ .+|+++|++.+++. +++
T Consensus 116 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~~~~~ 179 (401)
T 1fc4_A 116 DANGGLFETLLGAEDAIISDALNHASIID--------GVRLCKA--KRYRYA------NNDMQELEARLKEAREAGARHV 179 (401)
T ss_dssp HHHHTTHHHHCCTTCEEEEETTCCHHHHH--------HHHTSCS--EEEEEC------TTCHHHHHHHHHHHHHTTCSSE
T ss_pred HHHHHHHHHHcCCCCEEEEcchhHHHHHH--------HHHHcCC--ceEEEC------CCCHHHHHHHHHHhhccCCCce
Confidence 99999999999999999999988765431 2334554 555554 35889999988753 689
Q ss_pred EEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccc-cccc-C--CCC-CcccEEEecccccccCCCCeEEEe
Q 009673 254 LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVA-ASVV-A--DPF-KYCDVVTTTTHKSLRGPRGGMIFF 326 (529)
Q Consensus 254 lIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~-~~~~-~--~~~-~~aDiv~~S~hK~l~GprgG~i~~ 326 (529)
+|++++++||+ ..++++|.++|+++|+++|+|++|..|+.. .+.. + ..+ .+.|++++|+||++.|+.||++++
T Consensus 180 ~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~gG~~~~ 259 (401)
T 1fc4_A 180 LIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAA 259 (401)
T ss_dssp EEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEEEE
T ss_pred EEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCCEEEEc
Confidence 99998888776 778999999999999999999998767753 2211 1 111 257999999999996666999999
Q ss_pred eCCCcchhHHHhhhcccccCC-CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673 327 KKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 405 (529)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~ 405 (529)
++ ++.+.+.....+. ..++++....+++..+++.... .++..+++.++++++.+.|++.|+++.. ...+
T Consensus 260 ~~------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~ 329 (401)
T 1fc4_A 260 RK------EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEA--GSELRDRLWANARQFREQMSAAGFTLAG--ADHA 329 (401)
T ss_dssp CH------HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHTTCCBCC--SSSS
T ss_pred CH------HHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCcccC--CCCC
Confidence 87 6766665432111 1234455555555567776532 3677888999999999999988888763 3456
Q ss_pred eEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 406 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 406 ~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
++++++.. +.+..++.+.|.+.||.+.....++. +...+.+||+++.. .+++|++++++.|+++++
T Consensus 330 ~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~--~~~~~~iRi~~~~~----~~~~~i~~~~~~l~~~~~ 395 (401)
T 1fc4_A 330 IIPVMLGD-AVVAQKFARELQKEGIYVTGFFYPVV--PKGQARIRTQMSAA----HTPEQITRAVEAFTRIGK 395 (401)
T ss_dssp EEEEEEEC-HHHHHHHHHHHHHTTEECCEECTTSS--CTTCEEEEEECCTT----CCHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCC-hHHHHHHHHHHHHCCcEEeeecCCCC--CCCCceEEEEeCCC----CCHHHHHHHHHHHHHHHH
Confidence 67777642 23456677888888999865443321 11246799997643 358999999999998875
No 37
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.95 E-value=8.4e-27 Score=241.24 Aligned_cols=337 Identities=15% Similarity=0.094 Sum_probs=230.2
Q ss_pred cceeEecCC-CCCcHHHHHHHhhhhhccCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHH
Q 009673 103 KSLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (529)
Q Consensus 103 ~~i~L~ase-n~~~~~V~eal~~~l~~~y~~G~p~~-r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A 180 (529)
+.+.|..+. .+.|+.|++++...+.+.. ...+.. +.|. .+. ......++.+++++|+++++ .+...+|++|
T Consensus 16 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~-~~~~~~~~~y~--~~~-~~~~~l~~~la~~~g~~~~~---v~~~~g~t~a 88 (390)
T 1elu_A 16 NKTYFNFGGQGILPTVALEAITAMYGYLQ-ENGPFSIAANQ--HIQ-QLIAQLRQALAETFNVDPNT---ITITDNVTTG 88 (390)
T ss_dssp TSEECCTTTCCCCCHHHHHHHHHHHHHHH-HHCSSSHHHHH--HHH-HHHHHHHHHHHHHTTSCGGG---EEEESSHHHH
T ss_pred CeEEecCCccCCCCHHHHHHHHHHHHHHh-ccCCcchhhHH--HHH-HHHHHHHHHHHHHcCCCHHH---EEEeCChHHH
Confidence 346665443 3567899999988775432 111110 0111 111 22234558889999987642 2334566699
Q ss_pred HHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 181 NFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 181 ~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
+..++.++ ++|||+|+++++.|.++..... ......|. +++.+++++ +++.+|+++|++.+++ ++++|+++
T Consensus 89 ~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~----~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 161 (390)
T 1elu_A 89 CDIVLWGLDWHQGDEILLTDCEHPGIIAIVQ----AIAARFGI--TYRFFPVAATLNQGDAAAVLANHLGP-KTRLVILS 161 (390)
T ss_dssp HHHHHHHSCCCTTCEEEEETTCCHHHHHHHH----HHHHHHCC--EEEEECCGGGSSSSCHHHHHHTTCCT-TEEEEEEE
T ss_pred HHHHHhCCCCCCCCEEEEecCcccHHHHHHH----HHHHHhCc--EEEEEcCCCCCCccchHHHHHHhcCC-CceEEEEe
Confidence 99999999 8999999999998765421100 00122344 566666643 3578999999999987 89999999
Q ss_pred CCCCCC--CCCHHHHHHHHH----HhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCc
Q 009673 259 ASAYPR--DFDYPRMRQIAD----AVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPV 331 (529)
Q Consensus 259 ~s~~p~--~~d~~~i~~ia~----~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~ 331 (529)
+++||+ ..|+++|.++|+ ++|+++|+|++|..|....+... .+.|++++|+||++.|+.| |++++++
T Consensus 162 ~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~---~~~d~~~~s~~K~~~~~~g~G~~~~~~--- 235 (390)
T 1elu_A 162 HLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSR---LEVDYYAFTGHKWFAGPAGVGGLYIHG--- 235 (390)
T ss_dssp SBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTT---SCCSEEEEESSSTTCCCTTCEEEEECT---
T ss_pred ccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhh---cCCCEEEccccccccCCCceEEEEECH---
Confidence 888876 789999999999 99999999999887644222110 1579999999997766666 9999987
Q ss_pred chhHHHhhhccccc---------------------CCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHH
Q 009673 332 LGVELESAINNAVF---------------------PGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASR 389 (529)
Q Consensus 332 ~~~~l~~~i~~~~~---------------------p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~ 389 (529)
++.+++..... ....++++...++++..+++.+...+ +++..+++.++++++.+.
T Consensus 236 ---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~ 312 (390)
T 1elu_A 236 ---DCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRG 312 (390)
T ss_dssp ---TTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred ---HhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 45555443211 11235666666666666776554334 678889999999999999
Q ss_pred HHhc-CcEEecC-CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673 390 LVEL-GYKLVSG-GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 467 (529)
Q Consensus 390 L~~~-G~~v~~~-gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~ 467 (529)
|++. |++++.+ .....++++++. .+.+..++.+.|.++||.+..+ . .++++||+++.. .+++|++
T Consensus 313 L~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~~----~----~~~~iRis~~~~----~~~~~i~ 379 (390)
T 1elu_A 313 LNQLPHVHCLATSAPQAGLVSFTVD-SPLGHRAIVQKLEEQRIYLRTI----A----DPDCIRACCHYI----TDEEEIN 379 (390)
T ss_dssp HHHSTTEEESCSSCCSSSEEEEEEC-SSSCHHHHHHHHHHTTEECEEE----T----TTTEEEEECCTT----CCHHHHH
T ss_pred HHhcCCcEEecCccccccEEEEEcC-CCCCHHHHHHHHHHCCEEEEec----C----CCCeEEEecccC----CCHHHHH
Confidence 9985 8888753 123456666664 3456778888888899998543 2 257899997543 3589999
Q ss_pred HHHHHHHH
Q 009673 468 AIADFIHE 475 (529)
Q Consensus 468 ~la~~i~~ 475 (529)
++++.|++
T Consensus 380 ~~~~~l~~ 387 (390)
T 1elu_A 380 HLLARLAD 387 (390)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 99988864
No 38
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.95 E-value=4.6e-26 Score=234.44 Aligned_cols=320 Identities=14% Similarity=0.096 Sum_probs=226.8
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCceeeecCChH-
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGS- 178 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~-~~~~~~~~V~~~sGs- 178 (529)
+.|+|..++|+ +++.|++++...+.+....+|+. ....+++ +++++++|+ +++ +|.+++|+
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-------~~~~~l~----~~la~~~g~~~~~----~i~~~~g~t 95 (367)
T 3euc_A 31 GLVKLDAMENPYRLPPALRSELAARLGEVALNRYPV-------PSSEALR----AKLKEVMQVPAGM----EVLLGNGSD 95 (367)
T ss_dssp TCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-------CCHHHHH----HHHHHHHTCCTTC----EEEEEEHHH
T ss_pred CeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-------CcHHHHH----HHHHHHhCCCCcc----eEEEcCCHH
Confidence 56889888875 58999999988776422223332 1233444 778888998 443 45556665
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
+|+..++.++++|||+|++.++.|.++.. .+...|. +++.+++++ ++.+|+++|++.+++.++++|+++
T Consensus 96 ~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~v~~~ 164 (367)
T 3euc_A 96 EIISMLALAAARPGAKVMAPVPGFVMYAM--------SAQFAGL--EFVGVPLRA-DFTLDRGAMLAAMAEHQPAIVYLA 164 (367)
T ss_dssp HHHHHHHHHTCCTTCEEEEEESCSCCSCH--------HHHTTTC--EEEEEECCT-TSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEcCCCHHHHHH--------HHHHcCC--eEEEecCCC-CCCCCHHHHHHHhhccCCCEEEEc
Confidence 99999999999999999999988765421 2334554 667777763 678999999999987789999998
Q ss_pred CCCCCC--CC---CHHHHHHHHHHh--CCEEEEecccccccccccccCCCCC--cccEEEecccccc-cCCCCeEEEeeC
Q 009673 259 ASAYPR--DF---DYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL-RGPRGGMIFFKK 328 (529)
Q Consensus 259 ~s~~p~--~~---d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l-~GprgG~i~~~~ 328 (529)
+++||+ .. ++++|.++|++| |+++|+|++|.. +...+..+ .+. ..+++++|+||+. +|.|.|++++++
T Consensus 165 ~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~-~~~~~~~~-~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~ 242 (367)
T 3euc_A 165 YPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQP-FAQESWMS-RLTDFGNLLVMRTVSKLGLAGIRLGYVAGDP 242 (367)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCC-SSSCCSGG-GGGTCTTEEEEEECCCTTSCSCCEEEEEECH
T ss_pred CCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchh-hcccchHH-HHhhCCCEEEEecchhhcccccCceeeeeCH
Confidence 888886 33 577888889999 999999999653 32221111 111 3458899999983 567779999977
Q ss_pred CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceE
Q 009673 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLV 407 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~ 407 (529)
++.+.+.....++ +++....+++..+++. ...+++..+++.++++.+.+.|++. |+.+..+ ...++
T Consensus 243 ------~~~~~~~~~~~~~---~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~--~~~~~ 309 (367)
T 3euc_A 243 ------QWLEQLDKVRPPY---NVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPS--AANFL 309 (367)
T ss_dssp ------HHHHHHGGGCCSS---CCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTCEECCC--SSSEE
T ss_pred ------HHHHHHHHhCCCC---CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCC--CCeEE
Confidence 7777776544322 2344455555555654 2335788888999999999999886 8886543 24566
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
++++. +..++.+.|.++||.+..+... .+..++++||++. +++|++++++.|++++
T Consensus 310 ~~~~~----~~~~l~~~l~~~gi~v~~~~~~---~~~~~~~iRis~~-------~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 310 LARVP----DAAQTFDRLLARKVLIKNVSKM---HPLLANCLRVTVS-------TPEENAQFLEAFAASL 365 (367)
T ss_dssp EEECS----CHHHHHHHHHTTTEECEECGGG---CGGGTTEEEEECC-------CHHHHHHHHHHHHHHT
T ss_pred EEECC----CHHHHHHHHHHCCeEEEECCcc---CCCCCCEEEEecC-------CHHHHHHHHHHHHHHh
Confidence 77764 5678888899999998643211 1224578999953 5899999999998765
No 39
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.95 E-value=1.8e-25 Score=240.67 Aligned_cols=340 Identities=13% Similarity=0.034 Sum_probs=237.4
Q ss_pred CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC--CCCCceeeecCChHHHHHHHHHhhc
Q 009673 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGSPANFEVYTAIL 189 (529)
Q Consensus 112 n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~--~~~~~~~V~~~sGs~A~~~~l~all 189 (529)
.++++.+.+++...+...+. + +...+...++|+.+++++++++|++ +++...-+.+++|++||..++.++.
T Consensus 66 ~~~~~~v~~~l~~~~~~~~~--~-----~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~ 138 (502)
T 3hbx_A 66 TWMEPECDKLIMSSINKNYV--D-----MDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFK 138 (502)
T ss_dssp CCCCHHHHHHHHHTTTCBTT--C-----TTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhccCCC--C-----hhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHH
Confidence 45689999999887754432 1 1123446789989999999999998 4443333445677799999888886
Q ss_pred CC--------CC-----EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673 190 KP--------HD-----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (529)
Q Consensus 190 ~p--------GD-----~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi 256 (529)
++ || +|++.++.|.++. +.+...|. +++.++++++++.+|+++|++.+++ +|++|+
T Consensus 139 ~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~--------~~~~~~G~--~~~~v~~~~~~~~~d~~~l~~~i~~-~t~~v~ 207 (502)
T 3hbx_A 139 RKWQNKRKAEGKPVDKPNIVTGANVQVCWE--------KFARYFEV--ELKEVKLSEGYYVMDPQQAVDMVDE-NTICVA 207 (502)
T ss_dssp HHHHHHHHHTTCCCSCCEEEEETTCCHHHH--------HHHHHTTC--EEEEECCBTTBCSCCHHHHHHHCCT-TEEEEE
T ss_pred HHHhHHHHhcCCCCCCcEEEEcCCchHHHH--------HHHHHcCc--eeEEEecCCCcCcCCHHHHHHHHhh-CCEEEE
Confidence 65 87 8999887664321 23445565 5666667654589999999999988 889888
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHh------CCEEEEeccccccccc--ccccCCCC--CcccEEEecccccccCCCC-eE
Q 009673 257 AGASAYPR--DFDYPRMRQIADAV------GALLMMDMAHISGLVA--ASVVADPF--KYCDVVTTTTHKSLRGPRG-GM 323 (529)
Q Consensus 257 ~~~s~~p~--~~d~~~i~~ia~~~------g~~livD~ah~~Gli~--~~~~~~~~--~~aDiv~~S~hK~l~Gprg-G~ 323 (529)
++.++|++ ..|+++|.++|+++ |++|++|+||..+..+ .+..+..+ .++|++++++||++.+|.| |+
T Consensus 208 ~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G~ 287 (502)
T 3hbx_A 208 AILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGW 287 (502)
T ss_dssp EEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEE
T ss_pred EecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeEE
Confidence 88776665 78999999999999 9999999998654321 11112222 3799999999999977666 88
Q ss_pred EEeeCCCcchhHHH-hhhcc--ccc------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC
Q 009673 324 IFFKKDPVLGVELE-SAINN--AVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG 394 (529)
Q Consensus 324 i~~~~~~~~~~~l~-~~i~~--~~~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G 394 (529)
++++++ ++. +.+.. ... ..+.+++....++++..++..+...++.++.++..+++++|.+.|.+.|
T Consensus 288 ~~~~~~-----~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~ 362 (502)
T 3hbx_A 288 VIWRNK-----EDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTE 362 (502)
T ss_dssp EEESSG-----GGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEeCH-----HHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 888763 222 11111 000 1112333344556666677665556788889999999999999999865
Q ss_pred -cEEecCCCCCceEEEccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673 395 -YKLVSGGSDNHLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 472 (529)
Q Consensus 395 -~~v~~~gt~~~~~~v~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~ 472 (529)
++++.+....+++.+.+.. .+++...+.+.|.+.||.+.....|.. ......+||++... .+++|++.+++.
T Consensus 363 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~--~~~~~~lRisv~~~----~t~edid~li~~ 436 (502)
T 3hbx_A 363 RFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPN--AQHITVLRVVIRED----FSRTLAERLVID 436 (502)
T ss_dssp CEEECSCSSSSSEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTT--CTTCEEEEEECCTT----CCHHHHHHHHHH
T ss_pred CEEEEeCCCCceEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcc--cCCceEEEEEeCCC----CCHHHHHHHHHH
Confidence 9888652344566666543 235667889999999998754333322 12346799997654 458999999999
Q ss_pred HHHHHHHH
Q 009673 473 IHEGVEIT 480 (529)
Q Consensus 473 i~~~~~~~ 480 (529)
|++++...
T Consensus 437 L~~~l~~l 444 (502)
T 3hbx_A 437 IEKVMREL 444 (502)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988754
No 40
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.95 E-value=5.6e-26 Score=234.40 Aligned_cols=336 Identities=14% Similarity=0.150 Sum_probs=228.8
Q ss_pred CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc--
Q 009673 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-- 189 (529)
Q Consensus 112 n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all-- 189 (529)
.++++.|++++...+.+.+ +.+...|..+... .......++++++++|+++++ .+.+.+|++|+..++.++.
T Consensus 10 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~l~~~la~~~g~~~~~---v~~~~g~t~a~~~~~~~l~~~ 83 (382)
T 4eb5_A 10 KPVDERILEAMLPYMTESF--GNPSSVHSYGFKA-REAVQEAREKVAKLVNGGGGT---VVFTSGATEANNLAIIGYAMR 83 (382)
T ss_dssp CCCCHHHHHHHHHHHHTSC--CCTTCSSHHHHHH-HHHHHHHHHHHHHHHTCTTEE---EEEESSHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcc--CCCCCCcHHHHHH-HHHHHHHHHHHHHHhCCCCCe---EEEcCchHHHHHHHHHHHHhh
Confidence 4789999999998876533 3344333222222 233334668999999997642 2334455699999999987
Q ss_pred --CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--C
Q 009673 190 --KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--D 265 (529)
Q Consensus 190 --~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~ 265 (529)
+|||+|+++++.|.+..... ..+...|. +++.++++ +++.+|+++|++.+++ ++++|++++++||+ .
T Consensus 84 ~~~~gd~Vl~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~ 154 (382)
T 4eb5_A 84 NARKGKHILVSAVEHMSVINPA-----KFLQKQGF--EVEYIPVG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEIGTI 154 (382)
T ss_dssp HGGGCCEEEEETTCCHHHHHHH-----HHHTTTTC--EEEEECBC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTTCBB
T ss_pred ccCCCCEEEECCCcchHHHHHH-----HHHHhCCc--EEEEeccC-CCCccCHHHHHHHhcC-CCeEEEEeccCCCcccc
Confidence 89999999998876542211 01112354 67777776 4678999999999987 78999988888876 7
Q ss_pred CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcc
Q 009673 266 FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN 342 (529)
Q Consensus 266 ~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~ 342 (529)
.|+++|.++|+++|++ |+|++|..|.... .+. ++|++++|+||+ .||.| |+++++++. .+...+..
T Consensus 155 ~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~-----~~~~~~~di~~~s~sK~-~g~~g~G~~~~~~~~----~l~~~~~~ 223 (382)
T 4eb5_A 155 QPVEEISEVLAGKAAL-HIDATASVGQIEV-----DVEKIGADMLTISSNDI-YGPKGVGALWIRKEA----KLQPVILG 223 (382)
T ss_dssp CCHHHHHHHHTTSSEE-EEECTTTBTTBCC-----CHHHHTCSEEEEETGGG-TCCSSCEEEEEETTC----CCCCSSCS
T ss_pred CCHHHHHHHHHHCCCE-EEEcchhcCCccc-----CccccCCCEEEeehHHh-cCCCceEEEEEcccc----ccCceecC
Confidence 8999999999999999 9999987654321 121 479999999998 46766 999998741 01111100
Q ss_pred --cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCC--CCceEEEccCCCCCc
Q 009673 343 --AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS--DNHLVLVDLRPMGID 417 (529)
Q Consensus 343 --~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt--~~~~~~v~~~~~~i~ 417 (529)
.......++++...++++..+++... .++++..+++.++++.+.+.|++. |+.+..+.. ..+++++.+. +.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 300 (382)
T 4eb5_A 224 GGQENGLRSGSENVPSIVGFGKAAEITA-MEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS--YIE 300 (382)
T ss_dssp SCTGGGTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET--TSC
T ss_pred CCccccccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeC--CcC
Confidence 00011235666667777777777654 356788889999999999999885 888765421 1345555553 456
Q ss_pred HHHHHHhHhcCCeEEcCCCC--CCCC--------CC----CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 418 GARVEKILDMASITLNKNSV--PGDK--------SA----LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 418 ~~~~~~~L~~~GI~v~~~~~--Pg~~--------~~----~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
..++.+.|.++||.+..+.. ++.. .+ ..++.|||++...+ +++|++++++.|+++++..
T Consensus 301 ~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~----~~~~i~~~~~~l~~~~~~~ 373 (382)
T 4eb5_A 301 GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYN----TDEDVDRLLEVLPGVIERL 373 (382)
T ss_dssp HHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTC----CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCC----CHHHHHHHHHHHHHHHHHH
Confidence 77888888889999865321 1000 00 12478999976443 5899999999999988654
No 41
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.95 E-value=5.2e-26 Score=233.84 Aligned_cols=319 Identities=13% Similarity=0.048 Sum_probs=227.7
Q ss_pred hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-H
Q 009673 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (529)
Q Consensus 102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s 178 (529)
++.|+|..++|+ +++.|++++...+... .+|+.. .. .+++ +.+++++|++++ +|.+++| +
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~~------~~-~~lr----~~la~~~~~~~~----~v~~~~g~~ 92 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQNANKA--HLYPDD------SM-IELK----STLAQKYKVQNE----NIIIGAGSD 92 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHHGGGT--TSCCCT------TC-HHHH----HHHHHHHTCCGG----GEEEESSHH
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHhh--ccCCCC------Ch-HHHH----HHHHHHhCCCcc----eEEECCCHH
Confidence 467899888875 5899999999877532 234431 11 3444 677888998765 3444555 4
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
+|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++.+++ +|++++++.+++ ++++|+++
T Consensus 93 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~-~d~~~l~~~l~~-~~~~v~~~ 160 (365)
T 3get_A 93 QVIEFAIHSKLNSKNAFLQAGVTFAMYEI--------YAKQCGA--KCYKTQSITHNL-DEFKKLYETHKD-EIKLIFLC 160 (365)
T ss_dssp HHHHHHHHHHCCTTCEEEECSSCCTHHHH--------HHHHHTC--EEEECSSSSCCH-HHHHHHHHHTTT-TEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEeCCChHHHHH--------HHHHcCC--EEEEEecCCCCC-CCHHHHHHHhCC-CCCEEEEc
Confidence 99999999999999999999987754421 2334454 677777633568 999999999986 89999998
Q ss_pred CCCCCC--CCCHHHHHHHHH--HhCCEEEEecccccccc--cccccCCCCC-----cccEEEecccccc--cCCCCeEEE
Q 009673 259 ASAYPR--DFDYPRMRQIAD--AVGALLMMDMAHISGLV--AASVVADPFK-----YCDVVTTTTHKSL--RGPRGGMIF 325 (529)
Q Consensus 259 ~s~~p~--~~d~~~i~~ia~--~~g~~livD~ah~~Gli--~~~~~~~~~~-----~aDiv~~S~hK~l--~GprgG~i~ 325 (529)
+++||+ ..+.+++.++++ ++|+++|+|++|..+.. ..+....... ..+++++|+||++ +|+|.|+++
T Consensus 161 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 240 (365)
T 3get_A 161 LPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGI 240 (365)
T ss_dssp SSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEE
T ss_pred CCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEE
Confidence 888886 778888888888 67999999999764321 1111111111 3458899999996 678889999
Q ss_pred eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCc
Q 009673 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 405 (529)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~ 405 (529)
+++ ++.+.+.....++ +++....+++..+++.. ..+++..+++.++++.+.+.|++.|+.+..+ ...
T Consensus 241 ~~~------~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~--~~~ 307 (365)
T 3get_A 241 ANA------NIISAFYKLRAPF---NVSNLALKAAVAAMDDD--EFTEKTLENNFSQMELYKEFAKKHNIKIIDS--YTN 307 (365)
T ss_dssp ECH------HHHHHHHHHSCTT---CSCHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHHHTTCEECCC--SSS
T ss_pred cCH------HHHHHHHHhcCCC---CcCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhCCCEECCC--CCe
Confidence 976 7777776543332 24455555555566531 3457888889999999999999889887654 234
Q ss_pred eEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 406 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 406 ~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
++++++... +..++.+.|.++||.+..+..++ ++++||++. +++|++++++.|++++
T Consensus 308 ~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~------~~~iRis~~-------~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 308 FITYFFDEK--NSTDLSEKLLKKGIIIRNLKSYG------LNAIRITIG-------TSYENEKFFTEFDKIL 364 (365)
T ss_dssp EEEEECSSS--CHHHHHHHHHTTTEECEECGGGT------CSEEEEECC-------CHHHHHHHHHHHHHHH
T ss_pred EEEEECCCC--CHHHHHHHHHHCCEEEEECccCC------CCEEEEEcC-------CHHHHHHHHHHHHHHh
Confidence 567777542 67788888888999986543221 678999964 4799999999998765
No 42
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.95 E-value=1.2e-25 Score=231.73 Aligned_cols=343 Identities=18% Similarity=0.171 Sum_probs=229.2
Q ss_pred eeEecCC-CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673 105 LELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (529)
Q Consensus 105 i~L~ase-n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~ 183 (529)
+.|..+. ..+++.|++++...+.+.|.. +...+..+.... ......++++++++|++++. .+...+|++|+..
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~l~~~la~~~g~~~~~---v~~~~g~t~a~~~ 76 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIVFYREKYGN--PNSAHGMGIEAN-LHMEKAREKVAKVLGVSPSE---IFFTSCATESINW 76 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHTCCCC--TTCSSHHHHHHH-HHHHHHHHHHHHHHTSCGGG---EEEESCHHHHHHH
T ss_pred EEEecCccCCCCHHHHHHHHHHHHhcCCC--CccccHHHHHHH-HHHHHHHHHHHHHcCCCCCe---EEEECCHHHHHHH
Confidence 3444434 368999999999888765532 221111111112 22234568899999987642 1333455699999
Q ss_pred HHHhhc----CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 184 VYTAIL----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 184 ~l~all----~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
++.++. +|||+|+++++.|.++.... ..+...|. +++.++++ +++.+|+++|++.+++ ++++|+++.
T Consensus 77 ~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~ 147 (384)
T 1eg5_A 77 ILKTVAETFEKRKRTIITTPIEHKAVLETM-----KYLSMKGF--KVKYVPVD-SRGVVKLEELEKLVDE-DTFLVSIMA 147 (384)
T ss_dssp HHHHHHHHTTTTCCEEEECTTSCHHHHHHH-----HHHHHTTC--EEEECCBC-TTSCBCHHHHHHHCCT-TEEEEEEES
T ss_pred HHHhhhhhccCCCCEEEECCCCchHHHHHH-----HHHHhcCC--EEEEEccC-CCCccCHHHHHHHhCC-CCeEEEEEC
Confidence 999987 89999999998775542111 01123454 67777776 4678999999999987 899999988
Q ss_pred CCCCC--CCCHHHHHHHHHHhC--CEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchh
Q 009673 260 SAYPR--DFDYPRMRQIADAVG--ALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGV 334 (529)
Q Consensus 260 s~~p~--~~d~~~i~~ia~~~g--~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~ 334 (529)
++||+ ..|+++|.++|+++| ++||+|++|..|....+... . +.|++++|+||++ |+.| |+++++++
T Consensus 148 ~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~--~-~~di~~~s~sK~~-g~~G~G~~~~~~~----- 218 (384)
T 1eg5_A 148 ANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEK--L-EVDYASFSAHKFH-GPKGVGITYIRKG----- 218 (384)
T ss_dssp BCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTT--T-CCSEEEEEGGGGT-SCTTCEEEEECTT-----
T ss_pred CCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchh--c-CCCEEEecHHHhc-CCCceEEEEEcCC-----
Confidence 88875 789999999999999 99999999875533211110 1 5799999999985 6766 99999883
Q ss_pred HH--Hhhhcccc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC--CCceEE
Q 009673 335 EL--ESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS--DNHLVL 408 (529)
Q Consensus 335 ~l--~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt--~~~~~~ 408 (529)
+ ...+.... .....++++...++++..+++... .++++..+++.++++.+.+.|.+.|+++..+.. ......
T Consensus 219 -~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 296 (384)
T 1eg5_A 219 -VPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAV-EELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLS 296 (384)
T ss_dssp -SCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEE
T ss_pred -CccccccccCcccccccCCCCChHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHhCCCCeEEeCCcccCCCCEEE
Confidence 3 22221110 011234566666666666777643 356788899999999999999988888865421 123344
Q ss_pred EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCC----------CC----CCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673 409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKS----------AL----VPGGIRIGSPAMTTRGFSEKEFVAIADFIH 474 (529)
Q Consensus 409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~----------~~----~~~~iRig~~~~tt~g~~~~d~~~la~~i~ 474 (529)
+.+. +.+..++.+.|.++||.+..+...+... .. ..+.|||++... .+++|++++++.|+
T Consensus 297 ~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~----~~~~~i~~~~~~l~ 370 (384)
T 1eg5_A 297 VSFP--NIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKY----NTEEEVDYFLKKIE 370 (384)
T ss_dssp EECT--TCCHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTT----CCHHHHHHHHHHHH
T ss_pred EEeC--CCCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCC----CCHHHHHHHHHHHH
Confidence 4443 3467788888989999996532111000 00 136899997643 35899999999999
Q ss_pred HHHHH
Q 009673 475 EGVEI 479 (529)
Q Consensus 475 ~~~~~ 479 (529)
++++.
T Consensus 371 ~~~~~ 375 (384)
T 1eg5_A 371 EILSF 375 (384)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98764
No 43
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.95 E-value=5.7e-26 Score=238.12 Aligned_cols=347 Identities=15% Similarity=0.163 Sum_probs=234.2
Q ss_pred hhcceeEecCC-CCCcHHHHHHHhhhhh--ccCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC
Q 009673 101 QFKSLELIASE-NFTSRAVMEAVGSCLT--NKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS 176 (529)
Q Consensus 101 ~~~~i~L~ase-n~~~~~V~eal~~~l~--~~y~~G~p~~-r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s 176 (529)
..+.+.|..+. .++++.|++++...+. +.| ++|.. .+..+. ...+....+++++++++|++++. .+..++
T Consensus 20 ~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~l~~~la~~~~~~~~~---v~~~~g 93 (423)
T 3lvm_A 20 MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTF--GNPASRSHRFGW-QAEEAVDIARNQIADLVGADPRE---IVFTSG 93 (423)
T ss_dssp CCSSEECBTTTCCCCCHHHHHHHTTSSSTTSCC--SCTTCTTSHHHH-HHHHHHHHHHHHHHHHHTCCGGG---EEEESS
T ss_pred cCCCEeecCCCcCCCCHHHHHHHHHHHhhcccc--cCCCccccchhH-HHHHHHHHHHHHHHHHcCCCCCe---EEEeCC
Confidence 34567776443 4789999999998876 444 34433 222111 22333445668999999998653 233455
Q ss_pred hHHHHHHHHHhhcC----CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCC
Q 009673 177 GSPANFEVYTAILK----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP 252 (529)
Q Consensus 177 Gs~A~~~~l~all~----pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~p 252 (529)
|++|+..++.++++ |||+|+++++.|.+..... ..+...|. +++.+++++ ++.+|+++|++.+++ ++
T Consensus 94 gt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~-~~ 164 (423)
T 3lvm_A 94 ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTC-----RQLEREGF--EVTYLAPQR-NGIIDLKELEAAMRD-DT 164 (423)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHH-----HHHHHTTC--EEEEECCCT-TSCCCHHHHHHHCCT-TE
T ss_pred hHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHH-----HHHHHcCC--EEEEeccCC-CCccCHHHHHHhcCC-Cc
Confidence 56999999998874 8999999998876543211 01122344 667777763 688999999999987 88
Q ss_pred cEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCC
Q 009673 253 KLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (529)
Q Consensus 253 klIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~ 329 (529)
++|+++.++||+ ..|+++|.++|+++|++||+|++|..|....+... .++|++++|+||++ |+.| |+++++++
T Consensus 165 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~---~~~di~~~s~sK~~-g~~g~G~~~~~~~ 240 (423)
T 3lvm_A 165 ILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQ---LKVDLMSFSGHKIY-GPKGIGALYVRRK 240 (423)
T ss_dssp EEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTT---SCCSEEEEESTTTT-SCSSCEEEEECBT
T ss_pred EEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhh---cCCCEEEechHHhc-CCCCeEEEEEecc
Confidence 999998887776 78999999999999999999999876644221111 15799999999965 5554 99999873
Q ss_pred CcchhHHHhhhccccc------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCC
Q 009673 330 PVLGVELESAINNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS 402 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt 402 (529)
+.+.+..... ....++++...++++..+++... ..+++..+++.++++.+.+.|++. |+.+..+..
T Consensus 241 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 313 (423)
T 3lvm_A 241 ------PRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAK-EEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLE 313 (423)
T ss_dssp ------TBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCST
T ss_pred ------ccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCcc
Confidence 3333433221 12245667777777777777553 236788888999999999999875 888875421
Q ss_pred --CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCC--CCCCC--------CC----CCCeEEEccCCCccCCCCHHHH
Q 009673 403 --DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV--PGDKS--------AL----VPGGIRIGSPAMTTRGFSEKEF 466 (529)
Q Consensus 403 --~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~--Pg~~~--------~~----~~~~iRig~~~~tt~g~~~~d~ 466 (529)
..+++.+.+ .+.+..++.+.|.+ |.+..+.. ++... .. .++.|||++... .+++|+
T Consensus 314 ~~~~~~~~~~~--~~~~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~----~t~e~i 385 (423)
T 3lvm_A 314 HGAPNILNVSF--NYVEGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRF----TTEEEI 385 (423)
T ss_dssp TBCTTEEEEEE--TTSCHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTT----CCHHHH
T ss_pred ccCCCeEEEEe--CCCCHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCC----CCHHHH
Confidence 123344444 34567788888876 77654321 10000 00 137899997643 458999
Q ss_pred HHHHHHHHHHHHHHH
Q 009673 467 VAIADFIHEGVEITL 481 (529)
Q Consensus 467 ~~la~~i~~~~~~~~ 481 (529)
+++++.|+++++...
T Consensus 386 ~~~~~~l~~~~~~~~ 400 (423)
T 3lvm_A 386 DYTIELVRKSIGRLR 400 (423)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999987653
No 44
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.95 E-value=1.5e-25 Score=232.37 Aligned_cols=336 Identities=12% Similarity=0.047 Sum_probs=228.8
Q ss_pred hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-H
Q 009673 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (529)
Q Consensus 102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s 178 (529)
++.|+|..+++. +++.+.+++...+.+.. .+|+. .....++++.+.+++.+.+|++.+. .+|.+++| +
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~------~~g~~~l~~~la~~~~~~~g~~~~~--~~v~~~~g~~ 100 (388)
T 1j32_A 30 IDVCSFSAGEPDFNTPKHIVEAAKAALEQGK-TRYGP------AAGEPRLREAIAQKLQRDNGLCYGA--DNILVTNGGK 100 (388)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSCCC------TTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEESHHH
T ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHhcCCCCCh--hhEEEcCCHH
Confidence 356888877753 57899999987775321 22322 1223566767778888888864321 24555666 4
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEE
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~ 257 (529)
+|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++++ ++.+|+++|++.+++ ++++|++
T Consensus 101 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~ 169 (388)
T 1j32_A 101 QSIFNLMLAMIEPGDEVIIPAPFWVSYPE--------MVKLAEG--TPVILPTTVETQFKVSPEQIRQAITP-KTKLLVF 169 (388)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHHHTTC--EEEEECCCGGGTTCCCHHHHHHHCCT-TEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCChhHHH--------HHHHcCC--EEEEecCCcccCCCCCHHHHHHhcCc-CceEEEE
Confidence 99999999999999999999998765421 2334454 6666666542 478999999999987 7899998
Q ss_pred cCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCC---C----CcccEEEecccccc--cCCCCeE
Q 009673 258 GASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---F----KYCDVVTTTTHKSL--RGPRGGM 323 (529)
Q Consensus 258 ~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~----~~aDiv~~S~hK~l--~GprgG~ 323 (529)
++++||+ .. ++++|.++|+++|+++|+|++|.. +...+....+ + .+.|++++|+||++ +|+|.|+
T Consensus 170 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~ 248 (388)
T 1j32_A 170 NTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEK-ILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGF 248 (388)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEE
T ss_pred eCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchh-cccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEE
Confidence 8888876 33 589999999999999999999654 3332211111 1 13679999999997 5677899
Q ss_pred EEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCC
Q 009673 324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS 402 (529)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt 402 (529)
+++++ ++.+.+......+..+.+...+.++ ..+++.. ...+++..+++.++++.+.+.|++. |+.+..+.
T Consensus 249 ~~~~~------~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~- 319 (388)
T 1j32_A 249 LAGPV------PLVKAATKIQGHSTSNVCTFAQYGA-IAAYENS-QDCVQEMLAAFAERRRYMLDALNAMPGLECPKPD- 319 (388)
T ss_dssp EECCH------HHHHHHHHHHHTTTCSCCHHHHHHH-HHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCC-
T ss_pred EEeCH------HHHHHHHHHHhhcccCCCHHHHHHH-HHHHhCC-cHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCC-
Confidence 99987 6766665433333334444433333 3355422 2345777888899999999999885 88776542
Q ss_pred CCceEEEccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 403 DNHLVLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 403 ~~~~~~v~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.+++.++++...+.+..++.+.|. ++||.+..+...+ .++++||++. .++++++++++.|.++++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRis~~------~~~~~i~~~~~~l~~~l~ 385 (388)
T 1j32_A 320 GAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFG-----ADDCIRLSYA------TDLDTIKRGMERLEKFLH 385 (388)
T ss_dssp BTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGT-----CTTBEEEECC------SCHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhC-----CCCcEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 344556666432456677777775 5899985432111 1578999964 358999999999988775
No 45
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.95 E-value=5e-26 Score=235.60 Aligned_cols=332 Identities=13% Similarity=0.118 Sum_probs=228.7
Q ss_pred cceeEecCCC---CCcHHHHHHHhhhhhccCCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673 103 KSLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (529)
Q Consensus 103 ~~i~L~asen---~~~~~V~eal~~~l~~~y~~G~p~~r~~-~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs 178 (529)
..|++..+++ ++++.+++++...+.+ +..+++..+|. +..+...++ ++.+++++|++. .|.+++|+
T Consensus 40 ~~id~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~l----~~~la~~~g~~~-----~i~~~sGt 109 (384)
T 1bs0_A 40 QYLNFSSNDYLGLSHHPQIIRAWQQGAEQ-FGIGSGGSGHVSGYSVVHQAL----EEELAEWLGYSR-----ALLFISGF 109 (384)
T ss_dssp EEEECSCCCTTSGGGCHHHHHHHHHHHHH-HCSCCCSBTTTTCCCHHHHHH----HHHHHHHHTCSE-----EEEESCHH
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHHH----HHHHHHHhCCCc-----EEEeCCcH
Confidence 4577777665 4689999999888754 33333434442 223334444 477888899862 46779999
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEE
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLII 256 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi 256 (529)
+|+..++.++++|||.|++.++.|++... .+...|. +++.++ .+|+++|++.+++. ++++|+
T Consensus 110 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~~~v~ 173 (384)
T 1bs0_A 110 AANQAVIAAMMAKEDRIAADRLSHASLLE--------AASLSPS--QLRRFA------HNDVTHLARLLASPCPGQQMVV 173 (384)
T ss_dssp HHHHHHHHHHCCTTCEEEEETTCCHHHHH--------HHHTSSS--EEEEEC------TTCHHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHHHhCCCCcEEEEcccccHHHHH--------HHHHcCC--CEEEeC------CCCHHHHHHHHHhcCCCCeEEE
Confidence 99999999999999999999987764421 2334554 555654 25899999998764 267888
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccc-cccc-CCCC-CcccEEEecccccccCCCCeEEEeeCCCc
Q 009673 257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVA-ASVV-ADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPV 331 (529)
Q Consensus 257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~-~~~~-~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~~~ 331 (529)
+++++||+ ..|+++|.++|++||+++|+|++|..|... .+.. ...+ .+.|++++|+||++ ||.||++++++
T Consensus 174 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~-~~~GG~~~~~~--- 249 (384)
T 1bs0_A 174 TEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGF-GVSGAAVLCSS--- 249 (384)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTT-SSCCEEEEECH---
T ss_pred EeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchh-hccCcEEEeCH---
Confidence 88888876 779999999999999999999998776532 1110 1111 14789999999998 48889999987
Q ss_pred chhHHHhhhcccccCCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEc
Q 009673 332 LGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD 410 (529)
Q Consensus 332 ~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~ 410 (529)
++.+.+.....+.. .++++....+++..+++.....+.++..+++.++++++.+.|++.|+++..+ ..++++++
T Consensus 250 ---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~~~~ 324 (384)
T 1bs0_A 250 ---TVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADS--CSAIQPLI 324 (384)
T ss_dssp ---HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSCEECSC--CSSBCCEE
T ss_pred ---HHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcCCcccCC--CCCEEEEE
Confidence 66666544211111 1234555555555567765322446788889999999999999888887642 34556666
Q ss_pred cCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 411 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 411 ~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
+. .+.+..++.+.|.+.||.+.....|+. +...+.+||+++.. .+++|++++++.|+++
T Consensus 325 ~~-~~~~~~~l~~~l~~~gi~v~~~~~~~~--~~~~~~~Ri~~~~~----~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 325 VG-DNSRALQLAEKLRQQGCWVTAIRPPTV--PAGTARLRLTLTAA----HEMQDIDRLLEVLHGN 383 (384)
T ss_dssp EE-SHHHHHHHHHHHHHTTEECCEECTTSS--CTTCEEECCBCCTT----CCHHHHHHHHHHHHHH
T ss_pred eC-CHHHHHHHHHHHHHCCcEEEeecCCCC--CCCCceEEEEEcCC----CCHHHHHHHHHHHHhh
Confidence 63 223456677888788999966543331 12346899997643 3589999999998764
No 46
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.95 E-value=4.2e-26 Score=235.58 Aligned_cols=334 Identities=16% Similarity=0.102 Sum_probs=225.8
Q ss_pred cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCC-CCceeee-cCChHHH
Q 009673 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN-KWGVNVQ-PLSGSPA 180 (529)
Q Consensus 103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~-~~~~~V~-~~sGs~A 180 (529)
..+.+.++...+++.|++++...+.+. ++| ...+.. ...+++++++++.... .. .+|. .++|++|
T Consensus 5 ~~~~~~p~p~~~~~~v~~a~~~~~~~~---~~~--------~~~~~~-~~~~~~l~~~~~~~~~~~~-~~v~~~~g~t~a 71 (385)
T 2bkw_A 5 VDTLLIPGPIILSGAVQKALDVPSLGH---TSP--------EFVSIF-QRVLKNTRAVFKSAAASKS-QPFVLAGSGTLG 71 (385)
T ss_dssp CCEECSSSSCCCCHHHHHTTSCCCCCT---TSH--------HHHHHH-HHHHHHHHHHTTCCGGGTC-EEEEEESCTTHH
T ss_pred cceeecCCCcCchHHHHHHHhcccccc---CCH--------HHHHHH-HHHHHHHHHHhCCCCCCCC-ceEEEcCchHHH
Confidence 457778888889999999997654321 111 111122 2345677777776410 00 1333 4555699
Q ss_pred HHHHHHhhc---CCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc-CCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673 181 NFEVYTAIL---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAILFRPKLII 256 (529)
Q Consensus 181 ~~~~l~all---~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v-~~~~~~iD~d~le~~i~~~~pklIi 256 (529)
+..++.+++ +|||+|++++.++.. .+. ...+...|. +++.+++ + +++.+|+++|++++++.++++|+
T Consensus 72 l~~~~~~~~~~~~~gd~vlv~~~~~~~----~~~--~~~~~~~g~--~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~~v~ 142 (385)
T 2bkw_A 72 WDIFASNFILSKAPNKNVLVVSTGTFS----DRF--ADCLRSYGA--QVDVVRPLK-IGESVPLELITEKLSQNSYGAVT 142 (385)
T ss_dssp HHHHHHHHSCTTCSCCEEEEECSSHHH----HHH--HHHHHHTTC--EEEEECCSS-TTSCCCHHHHHHHHHHSCCSEEE
T ss_pred HHHHHHHHhccCCCCCeEEEEcCCcch----HHH--HHHHHHcCC--ceEEEecCC-CCCCCCHHHHHHHHhcCCCCEEE
Confidence 999999997 999999888543211 110 012233454 6667766 5 46789999999999765799999
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCC
Q 009673 257 AGASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (529)
Q Consensus 257 ~~~s~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~ 329 (529)
+++++||+ ..|+++|.++|++| |+++|+|++|..|....+ +. ++|++++|+||++.||.| |++++++
T Consensus 143 ~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~-----~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~- 216 (385)
T 2bkw_A 143 VTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFE-----FDEWGVDFALTASQKAIGAPAGLSISLCSS- 216 (385)
T ss_dssp EESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCC-----TTTTTCSEEEEESSSTTCCCSCEEEEEECH-
T ss_pred EEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcccc-----ccccCceEEEecCccccccCCcceEEEEcH-
Confidence 98887775 78999999999999 999999999876643221 22 579999999999988877 9999987
Q ss_pred CcchhHHHh-hhcc---------------------cccC---CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673 330 PVLGVELES-AINN---------------------AVFP---GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (529)
Q Consensus 330 ~~~~~~l~~-~i~~---------------------~~~p---~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~ 384 (529)
++.+ ++.. .... ...++++...++++..+++.+...++++..+++.++++
T Consensus 217 -----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 291 (385)
T 2bkw_A 217 -----RFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSD 291 (385)
T ss_dssp -----HHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred -----HHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 4443 3310 0000 11246677777777777876543346778888999999
Q ss_pred HHHHHH-HhcCcEEecC-C---CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEc-cCCCcc
Q 009673 385 ALASRL-VELGYKLVSG-G---SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIG-SPAMTT 458 (529)
Q Consensus 385 ~l~~~L-~~~G~~v~~~-g---t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig-~~~~tt 458 (529)
++.+.| ++.|+.++.+ + ...+++++.+.. ..++.+.|.++||.+..+ ......++.+||+ ++. +.
T Consensus 292 ~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gi~v~~g----~~~~~~~~~iRis~~~~-~~ 362 (385)
T 2bkw_A 292 WFKDSLVNGLQLTSVSRYPSNMSAHGLTAVYVAD----PPDVIAFLKSHGVVIAGG----IHKDIGPKYIRIGHMGV-TA 362 (385)
T ss_dssp HHHHHHHTTTCCEESSCSSSTTBCSSCEEEECSC----HHHHHHHHHHTTEECBCC----CCTTTGGGEEEECCCGG-GT
T ss_pred HHHHHHHHhcCceecccCcccccCCceEEEecCC----HHHHHHHHHHCCeEEeCC----CCcccCCCEEEEEcccc-cc
Confidence 999999 7778887752 1 134566666642 567778888899998543 2212235789999 431 11
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 009673 459 RGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 459 ~g~~~~d~~~la~~i~~~~~ 478 (529)
+..+++|++++++.|+++++
T Consensus 363 ~~~~~e~i~~~~~~l~~~~~ 382 (385)
T 2bkw_A 363 CNKNLPYMKNCFDLIKLALQ 382 (385)
T ss_dssp SSTTCTHHHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHHHHHHHH
Confidence 12457999999999988754
No 47
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.95 E-value=4.8e-26 Score=235.19 Aligned_cols=334 Identities=12% Similarity=0.146 Sum_probs=228.3
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--CCCCCCceeeecCChH
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSGS 178 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g--~~~~~~~~~V~~~sGs 178 (529)
+.|+|..+++. +++.|++++...+.+.. .+|+.. ..++++.+++++++.+| ++++ +|.+++|+
T Consensus 25 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~--------~~~~~~~l~~~l~~~~g~~~~~~----~v~~~~g~ 91 (383)
T 3kax_A 25 ELIHAWIADMDFEVPQPIQTALKKRIEHPI-FGYTLP--------PENIGDIICNWTKKQYNWDIQKE----WIVFSAGI 91 (383)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHHSCC-CCCCCC--------CTTHHHHHHHHHHHHHCCCCCGG----GEEEESCH
T ss_pred CeeecccccCCCCCCHHHHHHHHHHHhcCC-CCCCCC--------CHHHHHHHHHHHHHHhCCCCChh----hEEEcCCH
Confidence 56888777763 58999999998875432 233321 13445556688999999 4443 34445554
Q ss_pred -HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC--CCCCCHHHHHHHhhhcCCcEE
Q 009673 179 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAILFRPKLI 255 (529)
Q Consensus 179 -~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~--~~~iD~d~le~~i~~~~pklI 255 (529)
+|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++++ ++.+|+++|++.+++ ++++|
T Consensus 92 ~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v 160 (383)
T 3kax_A 92 VPALSTSIQAFTKENESVLVQPPIYPPFFE--------MVTTNNR--QLCVSPLQKQNDTYAIDFEHLEKQFQQ-GVKLM 160 (383)
T ss_dssp HHHHHHHHHHHCCTTCEEEECSSCCHHHHH--------HHHHTTC--EEEECCCEEETTEEECCHHHHHHHHTT-TCCEE
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCcHHHHH--------HHHHcCC--EEEeccceecCCcEEEcHHHHHHHhCc-CCeEE
Confidence 99999999999999999999988765421 2334454 6667666532 246999999999965 89999
Q ss_pred EEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC-------cccEEEecccccc--cCCCC
Q 009673 256 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-------YCDVVTTTTHKSL--RGPRG 321 (529)
Q Consensus 256 i~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-------~aDiv~~S~hK~l--~Gprg 321 (529)
+++.++||+ ..+ +++|.++|++||+++|+|++|.. +...+....++. ..++++.|+||++ +|.|.
T Consensus 161 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 239 (383)
T 3kax_A 161 LLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSD-IIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQA 239 (383)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCC
T ss_pred EEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccc-cccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhh
Confidence 998888886 444 66777779999999999999753 333332222221 2338899999986 67788
Q ss_pred eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEec
Q 009673 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS 399 (529)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~ 399 (529)
|+++++++ ++.+.+.........++++....+++..+++.. ....++..+++.++++.+.+.|++. |+.+..
T Consensus 240 G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 313 (383)
T 3kax_A 240 SIIIIPNE-----KLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTEC-NDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMK 313 (383)
T ss_dssp EEEECCCH-----HHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECC
T ss_pred eEEEeCCH-----HHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHhhCCCceEec
Confidence 99998542 666666543322223344555555555555431 1224777888899999999999874 888775
Q ss_pred CCCCCceEEEccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 400 GGSDNHLVLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 400 ~gt~~~~~~v~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
+ ..+.+.|+++...+.+..++.+.|. ++||.+..+...+ ...++.+||++. .++++++++++.|.+++
T Consensus 314 ~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRi~~~------~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 314 P-EGSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYG---LGGEEHIGINIG------CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp C-SBSSEEEEECGGGCCCHHHHHHHHHHTSCEECEESGGGC---TTCTTEEEEECS------SCHHHHHHHHHHHHHHH
T ss_pred C-CceEEEEEEccccCCCHHHHHHHHHhhCCEEeECchhhc---CCCCCeEEEEEc------CCHHHHHHHHHHHHHHh
Confidence 4 2345566777654567778877775 7999996543221 223578999864 25799999999988765
No 48
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.94 E-value=2.8e-25 Score=228.23 Aligned_cols=315 Identities=16% Similarity=0.130 Sum_probs=225.6
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-HH
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SP 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s~ 179 (529)
+.|+|..++|+ +++.|++++...+... .+||. ....++ ++++++++|++++ +|.+++| ++
T Consensus 33 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~-------~~~~~l----r~~la~~~~~~~~----~v~~~~g~t~ 95 (363)
T 3ffh_A 33 KITKLSSNENPLGTSKKVAAIQANSSVET--EIYPD-------GWASSL----RKEVADFYQLEEE----ELIFTAGVDE 95 (363)
T ss_dssp CCEECSSCSCTTCCCHHHHHHHHTCBSCC--CBC-----------CHHH----HHHHHHHHTCCGG----GEEEESSHHH
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHHh--hcCCC-------cchHHH----HHHHHHHhCCChh----hEEEeCCHHH
Confidence 56899888875 5899999998765321 12332 112333 4778889998765 3344555 59
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
|+..++.++++|||+|++++|.|.++. ..+...|. +++.+++++ ++.+|++++++.+++ ++++|++++
T Consensus 96 a~~~~~~~~~~~gd~vl~~~~~~~~~~--------~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~-~~~~v~~~~ 163 (363)
T 3ffh_A 96 LIELLTRVLLDTTTNTVMATPTFVQYR--------QNALIEGA--EVREIPLLQ-DGEHDLEGMLNAIDE-KTTIVWICN 163 (363)
T ss_dssp HHHHHHHHHCSTTCEEEEEESSCHHHH--------HHHHHHTC--EEEEEECCT-TSCCCHHHHHHHCCT-TEEEEEEES
T ss_pred HHHHHHHHHccCCCEEEEcCCChHHHH--------HHHHHcCC--EEEEecCCC-CCCcCHHHHHHhccc-CCCEEEEeC
Confidence 999999999999999999998765432 12334454 666777764 688999999999987 899999998
Q ss_pred CCCCC--CCCHHHHHHHHHHh--CCEEEEecccccccccccccCCCCC-----cccEEEecccccc--cCCCCeEEEeeC
Q 009673 260 SAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-----YCDVVTTTTHKSL--RGPRGGMIFFKK 328 (529)
Q Consensus 260 s~~p~--~~d~~~i~~ia~~~--g~~livD~ah~~Gli~~~~~~~~~~-----~aDiv~~S~hK~l--~GprgG~i~~~~ 328 (529)
++||+ ..|.+++.++++.+ |+++|+|++|..+ .. +.....+. ..++++.|+||++ +|.|.|++++++
T Consensus 164 p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~-~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 241 (363)
T 3ffh_A 164 PNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEY-VT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADK 241 (363)
T ss_dssp SCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGG-CS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECH
T ss_pred CCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhh-cC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCH
Confidence 88876 78999999999887 9999999997633 22 21111111 2347889999987 577889999977
Q ss_pred CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceE
Q 009673 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLV 407 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~ 407 (529)
++.+.+.....+ .+++....+++..+++.. ..+++..+++.++++.+.+.|++ .|+.+..+ ...++
T Consensus 242 ------~~~~~l~~~~~~---~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~--~~~~~ 308 (363)
T 3ffh_A 242 ------EIIRQLNIVRPP---FNTTSIGQKLAIEAIKDQ--AFIGECRTSNANGIKQYEAFAKRFEKVKLYPA--NGNFV 308 (363)
T ss_dssp ------HHHHHHHHTCCS---CCCBHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHCTTCEECCC--CSSEE
T ss_pred ------HHHHHHHHhCCC---CCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHhhCCCceECCC--CCeEE
Confidence 777777654432 234555555555566531 34577888899999999999999 89988754 24556
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
++++.. +..++.+.|.++||.+..+..++ .++.+||++. +++|++++++.|+++
T Consensus 309 ~~~~~~---~~~~~~~~l~~~gi~v~~g~~~~-----~~~~iRis~~-------~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 309 LIDLGI---EAGTIFSYLEKNGYITRSGAALG-----FPTAVRITIG-------KEEDNSAVIALLEKL 362 (363)
T ss_dssp EEECSS---CHHHHHHHHHHTTEECEETTTTT-----CTTEEEEECC-------CHHHHHHHHHHHHHH
T ss_pred EEECCC---CHHHHHHHHHHCCeEEEeCccCC-----CCCeEEEECC-------CHHHHHHHHHHHHHh
Confidence 777753 57788888888999986543222 2679999964 589999999999875
No 49
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.94 E-value=8.4e-26 Score=236.90 Aligned_cols=365 Identities=11% Similarity=0.048 Sum_probs=242.4
Q ss_pred hhhcccCChHHHHHHHHHHHHhhcceeEecCCCC--CcHHHHHHHhhhhhccC-CCCCCCCCCCCCchhHHHHHHHHHHH
Q 009673 80 DYSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKY-SEGLPGKRYYGGNEYIDELETLCQKR 156 (529)
Q Consensus 80 ~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~--~~~~V~eal~~~l~~~y-~~G~p~~r~~~g~~~~d~lE~~a~~~ 156 (529)
.+.+...++..+..+.... ...+.|+|..+++. +++.|++++...+.... ..+|+.. ....++++...++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~------~g~~~lr~~la~~ 79 (422)
T 3fvs_A 7 ARRLDGIDYNPWVEFVKLA-SEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKT------FGYPPLTKILASF 79 (422)
T ss_dssp CGGGTTCCCCHHHHHHHHH-HTSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCT------TCCHHHHHHHHHH
T ss_pred HHHhhccCccHHHHHHHHh-hcCCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCC------CCCHHHHHHHHHH
Confidence 3445566666554443322 23467888877763 68999999988876432 1234321 1124566666688
Q ss_pred HHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC--
Q 009673 157 ALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-- 233 (529)
Q Consensus 157 la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-- 233 (529)
+.+.+|.+.+.- -+|.+++|+ +|+..++.++++|||+|++.+|.|.++.. .+...|. +++.+++++
T Consensus 80 ~~~~~g~~~~~~-~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~ 148 (422)
T 3fvs_A 80 FGELLGQEIDPL-RNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEP--------MTMMAGG--RPVFVSLKPGP 148 (422)
T ss_dssp HHHHHTCCCCHH-HHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECBCCC
T ss_pred HHHhhCCCCCCC-CcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHH--------HHHHcCC--EEEEEeccccc
Confidence 888888764310 135556665 99999999999999999999998765421 2334454 556666653
Q ss_pred ---------CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 234 ---------STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 234 ---------~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
.++.+|++++++.+++ ++++|++++++||+ .. ++++|.++|++||+++|+|++|. ++...+..+
T Consensus 149 ~~~G~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~ 226 (422)
T 3fvs_A 149 IQNGELGSSSNWQLDPMELAGKFTS-RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQ-WMVYDGHQH 226 (422)
T ss_dssp CCSSSCCBGGGSBCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCTTCCC
T ss_pred ccccccccccCCCCCHHHHHhhcCC-CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccch-hhccCCCCC
Confidence 2457999999999987 89999998888887 44 58999999999999999999965 334333222
Q ss_pred CCC---C---cccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh----
Q 009673 300 DPF---K---YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA---- 367 (529)
Q Consensus 300 ~~~---~---~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~---- 367 (529)
.++ . ..++++.|+||++ +|+|.|++++++ ++.+.+.........+. +....+++..+++..
T Consensus 227 ~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~ 299 (422)
T 3fvs_A 227 ISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD------HIMKHLRTVHQNSVFHC-PTQSQAAVAESFEREQLLF 299 (422)
T ss_dssp CCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCH------HHHHHHHHHHHTTTCCC-CHHHHHHHHHHHHHHHHTT
T ss_pred CChhhcccccCcEEEEecchhccCCccceEEEEEeCH------HHHHHHHHHHhhccCCC-CcHHHHHHHHHHhhccccc
Confidence 221 1 2348899999997 678889999987 66666654322222223 344444555566531
Q ss_pred --cCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCC--Cc----------HHH-HHHhHhcCCeEE
Q 009673 368 --QSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG--ID----------GAR-VEKILDMASITL 432 (529)
Q Consensus 368 --~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~--i~----------~~~-~~~~L~~~GI~v 432 (529)
....+++..+++.++++.+.+.|++.|+.+..+. .+++.|+++...+ .+ ..+ +..+|+++||.+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v 378 (422)
T 3fvs_A 300 RQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQ-GSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVA 378 (422)
T ss_dssp TCTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCS-BSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEEC
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCC-eeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEE
Confidence 2344578888999999999999999999876653 3566777764210 00 223 445577899998
Q ss_pred cCCCCCCCC--CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 433 NKNSVPGDK--SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 433 ~~~~~Pg~~--~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
..+...+.. .+...+.+||++. .+++++++.++.|+++++
T Consensus 379 ~~g~~f~~~~~~~~~~~~iRis~~------~~~e~i~~~l~~l~~~l~ 420 (422)
T 3fvs_A 379 IPVSIFYSVPHQKHFDHYIRFCFV------KDEATLQAMDEKLRKWKV 420 (422)
T ss_dssp EEGGGGSCHHHHTTSCSEEEEECC------CCHHHHHHHHHHHHHHHH
T ss_pred eCcHHhcCCcCCCCCCCeEEEEec------CCHHHHHHHHHHHHHHHh
Confidence 653321110 1234688999864 268999999999988764
No 50
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.94 E-value=1.4e-25 Score=236.32 Aligned_cols=341 Identities=14% Similarity=0.118 Sum_probs=233.9
Q ss_pred hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (529)
Q Consensus 102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs- 178 (529)
++.|+|..+++. +++.|++++...+.+....+|+.. ....++++...+++.+.+|.+.+. .+|.+++|+
T Consensus 44 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~------~g~~~lr~~la~~~~~~~g~~~~~--~~i~~t~g~t 115 (437)
T 3g0t_A 44 TKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNL------DGLPELKQEASRFAKLFVNIDIPA--RACVPTVGSM 115 (437)
T ss_dssp CCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCT------TCCHHHHHHHHHHHHHHHCCCCCG--GGEEEESHHH
T ss_pred CCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCC------CChHHHHHHHHHHHHHhhCCCCCc--ccEEEeCCHH
Confidence 367888887764 589999999888764332344331 112466666667777777765321 245556666
Q ss_pred HHHHHHHHhhc--CCCC--EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcE
Q 009673 179 PANFEVYTAIL--KPHD--RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL 254 (529)
Q Consensus 179 ~A~~~~l~all--~pGD--~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pkl 254 (529)
+|+..++.+++ +||| +|++++|.|.++.. .+...|. +++.++++++++.+|+++|++++...++++
T Consensus 116 ~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~ 185 (437)
T 3g0t_A 116 QGCFVSFLVANRTHKNREYGTLFIDPGFNLNKL--------QCRILGQ--KFESFDLFEYRGEKLREKLESYLQTGQFCS 185 (437)
T ss_dssp HHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHH--------HHHHHTC--CCEEEEGGGGCTTHHHHHHHHHHTTTCCCE
T ss_pred HHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHH--------HHHHcCC--EEEEEeecCCCCccCHHHHHHHHhcCCceE
Confidence 99999999998 9999 99999987754321 2334454 455555654567899999999994448999
Q ss_pred EEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCC--------CC---CcccEEEecccccc--
Q 009673 255 IIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVAD--------PF---KYCDVVTTTTHKSL-- 316 (529)
Q Consensus 255 Ii~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--------~~---~~aDiv~~S~hK~l-- 316 (529)
|+++.++||+ ..+ +++|+++|++||++||+|++|..+ ...+..+. .+ ...+++++|+||++
T Consensus 186 v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 264 (437)
T 3g0t_A 186 IIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGM-DFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSY 264 (437)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTC-CTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSC
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhc-ccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCC
Confidence 9998888886 444 778899999999999999997533 22221111 11 13458999999986
Q ss_pred cCCCCeEEEeeCCCcchhHHHh-h-----------------hcccccCCCCCCChHHHHHHHHHHHHHhcC--chHHHHH
Q 009673 317 RGPRGGMIFFKKDPVLGVELES-A-----------------INNAVFPGLQGGPHNHTIGGLAVCLKHAQS--PEFKVYQ 376 (529)
Q Consensus 317 ~GprgG~i~~~~~~~~~~~l~~-~-----------------i~~~~~p~~~g~p~~~~iaala~al~~~~~--~~~~~~~ 376 (529)
+|+|.|++++++ ++.+ . +....... ..+++....+++..+++.... ..+++..
T Consensus 265 ~G~r~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 337 (437)
T 3g0t_A 265 AGQRIGVLMISG------KLYEREYPDLEESFGRLRFGEALSSSALYAL-SSGATHSAQWGMAAMLKACNDGEYNFRDSV 337 (437)
T ss_dssp GGGCCEEEEECH------HHHHCBCGGGHHHHSCSBHHHHHHTTHHHHH-HSSSCHHHHHHHHHHHHHHHTTSCCHHHHH
T ss_pred ccceeEEEEECH------HHhhhhhhcccccccccchhHHHHHHHHhhh-cCCCCHHHHHHHHHHHhCcHhHHHHHHHHH
Confidence 678889999987 6666 5 43322111 123344445555556665321 1167888
Q ss_pred HHHHHHHHHHHHHHHhcCcEEe------cCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEE
Q 009673 377 NKVVSNCRALASRLVELGYKLV------SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIR 450 (529)
Q Consensus 377 ~~i~~~a~~l~~~L~~~G~~v~------~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iR 450 (529)
+++.++++.+.+.|++.|+.+. .+...++++++++. +++..++.+.|.++||.+.....++ ...++++|
T Consensus 338 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~gi~v~~~~~~~---~~~~~~iR 412 (437)
T 3g0t_A 338 IEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGYK--GMDSSKLIEKFVRYGMCAITLKTTG---SKRNEAMR 412 (437)
T ss_dssp HHHHHHHHHHHHHHHTTTEEESSCEETTEECCSSSEEEEEET--TCCHHHHHHHHHHTTEECEESTTTT---CCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHcCCEEeccccCCCCCceeEEEEEecC--CCCHHHHHHHHHHcCeEEeeccccC---CCCCCEEE
Confidence 9999999999999999899887 22123566777775 5678888888888899996543222 11237899
Q ss_pred EccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 451 IGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 451 ig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
|++... +++|++++++.|+++++
T Consensus 413 is~~~~-----~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 413 ICTSLL-----PESQFPDLEKRLQMLNA 435 (437)
T ss_dssp EECSSS-----CGGGHHHHHHHHHHHHH
T ss_pred EEEecC-----CHHHHHHHHHHHHHHHh
Confidence 997643 47999999999988765
No 51
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.94 E-value=7.7e-26 Score=233.67 Aligned_cols=335 Identities=15% Similarity=0.111 Sum_probs=224.0
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.|+|..+++. .++.+++++...+.+....+| +......++++...+++.+.+|++.+.- .+|.+++|+ +
T Consensus 26 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~l~~~ia~~~~~~~g~~~~~~-~~v~~~~g~~~ 98 (376)
T 2dou_A 26 GLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGY------CLKSCTLPFLEEAARWYEGRYGVGLDPR-REALALIGSQE 98 (376)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSC------CCHHHHHHHHHHHHHHHHHHHSCCCCTT-TSEEEESSHHH
T ss_pred CEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCC------CCCCCCHHHHHHHHHHHHHHhCCCCCCC-ccEEEcCCcHH
Confidence 56888877764 579999999887743211223 2223456677666677777779862110 034446664 8
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
|+..++.++++|||+|++.+|.|.++.. .+...|. +++.+++ ++++.+|++++++.+++ ++++|++++
T Consensus 99 a~~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~-~~~~~~d~~~l~~~l~~-~~~~v~l~~ 166 (376)
T 2dou_A 99 GLAHLLLALTEPEDLLLLPEVAYPSYFG--------AARVASL--RTFLIPL-REDGLADLKAVPEGVWR-EAKVLLLNY 166 (376)
T ss_dssp HHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHTTC--EEEEECB-CTTSSBCGGGSCHHHHH-HEEEEEECS
T ss_pred HHHHHHHHhcCCCCEEEECCCCcHhHHH--------HHHHcCC--EEEEeeC-CCCCCCCHHHHHHhhcc-CceEEEECC
Confidence 9999999999999999999987755421 2233454 6666666 35567999999998876 789999988
Q ss_pred CCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---C--cccEEEecccccc--cCCCCeEEEee
Q 009673 260 SAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHKSL--RGPRGGMIFFK 327 (529)
Q Consensus 260 s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~--~aDiv~~S~hK~l--~GprgG~i~~~ 327 (529)
++||+ ..+ +++|.++|++||+++|+|++|..+ ...+.....+ + ..+++++|+||++ +|+|.|+++++
T Consensus 167 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 245 (376)
T 2dou_A 167 PNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQ-VYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS 245 (376)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGG-BSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC
T ss_pred CCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhc-ccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC
Confidence 88886 444 778899999999999999997643 3222111111 1 3468899999997 67889999988
Q ss_pred CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 407 (529)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~ 407 (529)
+ ++.+.+.........+. +....+++..+++.. ...+++..+++.++++.+.+.|++. +.+..+ ..++++
T Consensus 246 ~------~~~~~l~~~~~~~~~~~-~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~-~~~~~~ 315 (376)
T 2dou_A 246 E------EALARLERVKGVIDFNQ-YAGVLRMGVEALKTP-KEVVRGYARVYRERALGMAEALKGV-LSLLPP-RATMYL 315 (376)
T ss_dssp H------HHHHHHHHHHHHHCCCS-CHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHHHHHTTT-SEECCC-CBSSEE
T ss_pred H------HHHHHHHHHHHhcccCC-CHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHh-cCccCC-CeeEEE
Confidence 7 67666654322211222 333444444455431 1234677788888999999999887 776543 234556
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
++++. .+.+..++.+.|.+.||.+..+...+ +..++++||++.. ++++++++++.|.+++
T Consensus 316 ~~~~~-~~~~~~~~~~~l~~~gi~v~~g~~f~---~~~~~~~Ris~~~------~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 316 WGRLP-EGVDDLEFGLRLVERGVALAPGRGFG---PGGKGFVRIALVR------PLEELLEAAKRIREAL 375 (376)
T ss_dssp EEECC-TTCCHHHHHHHHHHTTEECEEGGGGC---GGGTTEEEEECCS------CHHHHHHHHHHHHHTC
T ss_pred EEECC-CCCCHHHHHHHHHHCCEEEcCchhhC---CCCCCeEEEEecC------CHHHHHHHHHHHHHHh
Confidence 77775 34566777777777799986542221 1135789999752 4789999998887653
No 52
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.94 E-value=1.4e-25 Score=232.19 Aligned_cols=349 Identities=15% Similarity=0.122 Sum_probs=230.4
Q ss_pred cccCChHHHHHHHHHHHHhhcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673 83 LGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (529)
Q Consensus 83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~ 160 (529)
+....+..+..+..... ..+.|+|..+++. .++.+.+++...+.+ ...|+. .....+++ +.++++
T Consensus 7 ~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~------~~~~~~l~----~~la~~ 73 (381)
T 1v2d_A 7 TEAAKESIFPRMSGLAQ-RLGAVNLGQGFPSNPPPPFLLEAVRRALGR--QDQYAP------PAGLPALR----EALAEE 73 (381)
T ss_dssp GGGC---CHHHHHHHHH-HHTCEECCCCSCSSCCCHHHHHHHHHHTTT--SCSCCC------TTCCHHHH----HHHHHH
T ss_pred hhhcCccHHHHHHHHHh-cCCeEEecCCCCCCCCCHHHHHHHHHHHHH--hcCCCC------CCCCHHHH----HHHHHh
Confidence 33444444443333222 2467888877753 578999999887753 122322 11123444 667788
Q ss_pred cCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC--CCCCCC
Q 009673 161 FNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD--ESTGLV 238 (529)
Q Consensus 161 ~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~--~~~~~i 238 (529)
+++++++ .+...+|++|+..++.++++|||+|+++++.|.++.. .+...|. +++.++++ ++++.+
T Consensus 74 ~~~~~~~---v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~ 140 (381)
T 1v2d_A 74 FAVEPES---VVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLP--------DAFLAGA--KARLVRLDLTPEGFRL 140 (381)
T ss_dssp HTSCGGG---EEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECEEETTEEEC
T ss_pred cCCChhh---EEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEEeCCCCCccCCc
Confidence 9988653 1333455699999999999999999999998765421 2334554 56666665 345789
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC----CcccEEE
Q 009673 239 DYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF----KYCDVVT 309 (529)
Q Consensus 239 D~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~----~~aDiv~ 309 (529)
|+++|++.+++ ++++|++++++||+ .. ++++|.++|++||+++|+|++|..+.. +..+.++ .+.|+++
T Consensus 141 d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--g~~~~~~~~~~~~~~~~~ 217 (381)
T 1v2d_A 141 DLSALEKALTP-RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY--GERPRRLREFAPERTFTV 217 (381)
T ss_dssp CHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS--SSCCCCHHHHCTTTEEEE
T ss_pred CHHHHHHhcCc-CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc--CCCCCCHHHhcCCCEEEE
Confidence 99999999976 78999988888876 44 389999999999999999999754322 2111111 2578999
Q ss_pred ecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHH
Q 009673 310 TTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRAL 386 (529)
Q Consensus 310 ~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-~~~~~~~~~~i~~~a~~l 386 (529)
+|+||++ +|+|.|++++++ ++.+.+....... ..+++....+++..+|+... ...+++..+++.++++++
T Consensus 218 ~s~sK~~~~~G~r~G~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 290 (381)
T 1v2d_A 218 GSAGKRLEATGYRVGWIVGPK------EFMPRLAGMRQWT-SFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLL 290 (381)
T ss_dssp EEHHHHTTCGGGCCEEEECCT------TTHHHHHHHHHHH-TSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred eechhhcCCcccceEEEEeCH------HHHHHHHHHHhhc-ccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHH
Confidence 9999987 578889999987 4555543321111 11223344445555666432 345678888999999999
Q ss_pred HHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHH
Q 009673 387 ASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEF 466 (529)
Q Consensus 387 ~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~ 466 (529)
.+.|++.|+++..+. .++++++++... + +.++|+++||.+..+..++. .+..++++||++.. +++++
T Consensus 291 ~~~L~~~g~~~~~~~-~~~~~~~~~~~~--~---~~~~l~~~gi~v~~g~~~~~-~~~~~~~iRi~~~~------~~~~i 357 (381)
T 1v2d_A 291 AGGLRAMGLRVYVPE-GTYFLMAELPGW--D---AFRLVEEARVALIPASAFYL-EDPPKDLFRFAFCK------TEEEL 357 (381)
T ss_dssp HHHHHHTTCCEECCS-BSSEEEEECTTC--C---HHHHHHHTCEECEEGGGGCS-SSCCTTEEEEECCS------CHHHH
T ss_pred HHHHHHCCCEecCCC-cceEEEEecChH--h---HHHHHHhCCEEEecchHhCC-CCCCCCEEEEEeCC------CHHHH
Confidence 999999898877642 245667777532 2 77888999999865432211 11235789999753 58999
Q ss_pred HHHHHHHHHHHHHH
Q 009673 467 VAIADFIHEGVEIT 480 (529)
Q Consensus 467 ~~la~~i~~~~~~~ 480 (529)
+++++.|.+++...
T Consensus 358 ~~~~~~l~~~l~~~ 371 (381)
T 1v2d_A 358 HLALERLGRVVNSP 371 (381)
T ss_dssp HHHHHHHHHHC---
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999887643
No 53
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.94 E-value=1.1e-25 Score=235.60 Aligned_cols=321 Identities=15% Similarity=0.163 Sum_probs=221.9
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g-~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pG 192 (529)
.+|.|.+++...+. +|..++.+.+.+.| .+...+++ +++++++|.+. .+.+++|++|+..++.++++||
T Consensus 74 ~~p~v~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~-----~i~~~sGt~a~~~~l~~~~~~g 143 (409)
T 3kki_A 74 NHPLIKARLAKSLL-EEQQSLFMSASFLQNDYDKPMIE----KRLAKFTGFDE-----CLLSQSGWNANVGLLQTICQPN 143 (409)
T ss_dssp TCHHHHHHHHHHHH-SCCCCCCSBGGGGCSTTTSCHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTT
T ss_pred CCHHHHHHHHHHHH-HcCCCCCccccccCCcHHHHHHH----HHHHHHhCCCe-----EEEecchHHHHHHHHHHhcCCC
Confidence 47999999988774 44433333332222 23333444 77888999875 3567999999999999999999
Q ss_pred CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHH
Q 009673 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPR 270 (529)
Q Consensus 193 D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~ 270 (529)
|.|++.++.|+++.. .+...|. ++++++ .+|+++|++++++.++++|++++++||+ ..++++
T Consensus 144 d~Vl~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~ 207 (409)
T 3kki_A 144 TNVYIDFFAHMSLWE--------GARYANA--QAHPFM------HNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAE 207 (409)
T ss_dssp CEEEEETTSCHHHHH--------HHHHTTC--EEEEEC------TTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHH
T ss_pred CEEEECCCcCHHHHH--------HHHHcCC--eEEEec------CCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHH
Confidence 999999987765431 2334454 555544 2689999999987678999999888765 788999
Q ss_pred HHHHHHHhCCEEEEeccccccccccccc----CCCC-CcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhccccc
Q 009673 271 MRQIADAVGALLMMDMAHISGLVAASVV----ADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVF 345 (529)
Q Consensus 271 i~~ia~~~g~~livD~ah~~Gli~~~~~----~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~ 345 (529)
|+++|++||++||+|++|..|....... ...+ ...|++++|+||++.++ ||++++++ ++.+.+.....
T Consensus 208 l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~-gg~v~~~~------~~~~~~~~~~~ 280 (409)
T 3kki_A 208 LVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYR-AGAIWCNN------EVNRCVPFISY 280 (409)
T ss_dssp HHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS-CEEEEESS------SGGGTHHHHCH
T ss_pred HHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCC-ceEEEECH------HHHHHHHHhCc
Confidence 9999999999999999987654321100 0011 24689999999999655 89999988 45444432211
Q ss_pred CC-CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHh
Q 009673 346 PG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKI 424 (529)
Q Consensus 346 p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~ 424 (529)
+. ..++++...++++.++++... ...++.+++.++++++.+.|++.|+++.. ..+++++.+.. ..+..++.+.
T Consensus 281 ~~~~~~~~~~~~~aa~~aal~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~---~~~~~~~~~~~-~~~~~~~~~~ 354 (409)
T 3kki_A 281 PAIFSSTLLPYEAAGLETTLEIIE--SADNRRQHLDRMARKLRIGLSQLGLTIRS---ESQIIGLETGD-ERNTEKVRDY 354 (409)
T ss_dssp HHHHSBCCCHHHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHTTTCCCCC---SSSEEEEEEES-HHHHHHHHHH
T ss_pred CccccCCCcHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCccCC---CCCEEEEEeCC-HHHHHHHHHH
Confidence 11 112234455555556676543 22577888899999999999998887663 34556666542 1234567777
Q ss_pred HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 425 LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 425 L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
|.+.||.+.....|.. +...+.|||+++.. .+++|++++++.|++++..
T Consensus 355 L~~~Gv~v~~~~~~~~--~~~~~~iRi~~~~~----~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 355 LESNGVFGSVFCRPAT--SKNKNIIRLSLNSD----VNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp HHHTTEECEEECTTSS--CTTCEEEEEECCTT----CCHHHHHHHHHHHHHHHHH
T ss_pred HHHCCceEeeeCCCCc--CCCCcEEEEEccCC----CCHHHHHHHHHHHHHHHhc
Confidence 7777999865433321 23457899998653 4589999999999998764
No 54
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.94 E-value=2.4e-25 Score=230.76 Aligned_cols=355 Identities=13% Similarity=0.113 Sum_probs=233.5
Q ss_pred cccCChHHHHHHHHHHHHhhcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 009673 83 LGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (529)
Q Consensus 83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~ 160 (529)
+....+..+..+.+.. ...+.|+|..+++. .++.+++++...+.+. ..+|+. .....++++...+++.+.
T Consensus 12 ~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~------~~g~~~l~~~la~~l~~~ 83 (386)
T 1u08_A 12 LPQLGTTIFTQMSALA-QQHQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQYAP------MTGVQALREAIAQKTERL 83 (386)
T ss_dssp CCCCCCCHHHHHHHHH-HHTTCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCC------TTCCHHHHHHHHHHHHHH
T ss_pred hhcCCccHHHHHHHHH-hcCCeEEecCCCCCCCCCHHHHHHHHHHHHhh-ccCCCC------CCCCHHHHHHHHHHHHHH
Confidence 3344444454443322 22456888776642 6799999998877542 123322 111346676667888888
Q ss_pred cCCCCCCCce-eeecCCh-HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCC
Q 009673 161 FNLDENKWGV-NVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238 (529)
Q Consensus 161 ~g~~~~~~~~-~V~~~sG-s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~i 238 (529)
+|.+.+. . +|.+++| ++|+..++.++++|||+|++++|.|.++.. .+...|. +++.++++++++.+
T Consensus 84 ~g~~~~~--~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~ 151 (386)
T 1u08_A 84 YGYQPDA--DSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAP--------AIALSGG--IVKRMALQPPHFRV 151 (386)
T ss_dssp HSCCCCT--TTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECCTTTCCC
T ss_pred hCCCCCC--CCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEeecCcccCcC
Confidence 8864211 1 2334555 599999999999999999999998765421 2334454 66667776546789
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC------CcccE
Q 009673 239 DYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF------KYCDV 307 (529)
Q Consensus 239 D~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~------~~aDi 307 (529)
|+++|++.+++ ++++|++++++||+ .. ++++|.++|++||+++|+|++|.. +...+....++ ...|+
T Consensus 152 d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~i 229 (386)
T 1u08_A 152 DWQEFAALLSE-RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEH-INFSQQGHASVLAHPQLRERAV 229 (386)
T ss_dssp CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTT-CBCCSSCCCCGGGSHHHHTTEE
T ss_pred CHHHHHHhhcc-cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccc-cccCCCCCcChhcccCccCcEE
Confidence 99999999976 88999998888886 44 478999999999999999999754 33322111111 14689
Q ss_pred EEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 009673 308 VTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (529)
Q Consensus 308 v~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~ 385 (529)
+++|+||++ +|+|.|++++++ ++.+.+.........+. +....+++..+|+.. ...+++..+++.++++.
T Consensus 230 ~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~~~-~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~ 301 (386)
T 1u08_A 230 AVSSFGKTYHMTGWKVGYCVAPA------PISAEIRKVHQYLTFSV-NTPAQLALADMLRAE-PEHYLALPDFYRQKRDI 301 (386)
T ss_dssp EEEEHHHHTTCGGGCCEEEECCH------HHHHHHHHHHHHHTSSC-CHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHH
T ss_pred EEecchhhcCCcccceEEEEcCH------HHHHHHHHHHHhhccCC-ChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHH
Confidence 999999997 577889999987 67666554321111222 333444555567653 33457778888899999
Q ss_pred HHHHHHhcCcEEecCCCCCceEEEccCCCC-CcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCH
Q 009673 386 LASRLVELGYKLVSGGSDNHLVLVDLRPMG-IDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE 463 (529)
Q Consensus 386 l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~-i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~ 463 (529)
+.+.|++.|+.+..+. .++++++++...+ .+..++.+.| +++||.+..+...+. .+..++++||++. .++
T Consensus 302 l~~~L~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~-~~~~~~~iRis~~------~~~ 373 (386)
T 1u08_A 302 LVNALNESRLEILPCE-GTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCA-DPFPHKLIRLCFA------KKE 373 (386)
T ss_dssp HHHHTTSSSCEECCCC-BSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCS-SCCCSCEEEEECC------SCH
T ss_pred HHHHHHHCCCeecCCC-ceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCC-CCCCCCEEEEEEc------CCH
Confidence 9999988888876542 3456777775321 4566676655 578999864321110 1124578999974 257
Q ss_pred HHHHHHHHHHHH
Q 009673 464 KEFVAIADFIHE 475 (529)
Q Consensus 464 ~d~~~la~~i~~ 475 (529)
++++++++.|++
T Consensus 374 ~~i~~~~~~l~~ 385 (386)
T 1u08_A 374 STLLAAAERLRQ 385 (386)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhh
Confidence 999998888753
No 55
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.94 E-value=2.9e-25 Score=230.78 Aligned_cols=329 Identities=16% Similarity=0.099 Sum_probs=225.0
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
..|+|..+++. .++.+++++...+... ..+|+. .....++++...+++.+.+|++.+. .+|.+++|+ +
T Consensus 42 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~------~~g~~~lr~~la~~~~~~~g~~~~~--~~v~~~~g~t~ 112 (389)
T 1o4s_A 42 DVINLTAGEPDFPTPEPVVEEAVRFLQKG-EVKYTD------PRGIYELREGIAKRIGERYKKDISP--DQVVVTNGAKQ 112 (389)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHTTC-CCCCCC------TTCCHHHHHHHHHHHHHHHTCCCCG--GGEEEESHHHH
T ss_pred CEEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCH--HHEEEecCHHH
Confidence 56888877753 5789999998877532 122322 1223567766667777777874211 144556665 9
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
|+..++.++++|||+|++++|.|.++.. .+...|. +++.++++++ ++.+|+++|++.+++ ++++|+++
T Consensus 113 al~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 181 (389)
T 1o4s_A 113 ALFNAFMALLDPGDEVIVFSPVWVSYIP--------QIILAGG--TVNVVETFMSKNFQPSLEEVEGLLVG-KTKAVLIN 181 (389)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECCGGGTTCCCHHHHHHTCCT-TEEEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEEecCCccCCCCCHHHHHHhccc-CceEEEEc
Confidence 9999999999999999999998765421 2334554 5666666542 568999999999987 78999888
Q ss_pred CCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC--C---CcccEEEecccccc--cCCCCeEEEe
Q 009673 259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--F---KYCDVVTTTTHKSL--RGPRGGMIFF 326 (529)
Q Consensus 259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~--~---~~aDiv~~S~hK~l--~GprgG~i~~ 326 (529)
+++||+ ..+ +++|.++|+++|+++|+|++|..+. ..+..... + .+.|++++|+||++ +|+|.|++++
T Consensus 182 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~-~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~ 260 (389)
T 1o4s_A 182 SPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLV-YTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLIS 260 (389)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSB-CSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEEC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc-cCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEe
Confidence 888876 444 8999999999999999999976443 22211111 1 24689999999997 5778899999
Q ss_pred eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 406 (529)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~ 406 (529)
++ ++.+.+......+..+.+...+.++ ..+++ .++++..+++.++++.+.+.|++.|+++..+ ..+++
T Consensus 261 ~~------~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~ 328 (389)
T 1o4s_A 261 SE------KVATAVSKIQSHTTSCINTVAQYAA-LKALE----VDNSYMVQTFKERKNFVVERLKKMGVKFVEP-EGAFY 328 (389)
T ss_dssp CH------HHHHHHHHHHHHHTCSCCHHHHHHH-HHHTT----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC-SBSSE
T ss_pred CH------HHHHHHHHHhhhcccCCCHHHHHHH-HHHHh----ccHHHHHHHHHHHHHHHHHHHHhcCCeeecC-CcceE
Confidence 87 6766665433222233333333332 22332 2257778889999999999999888877653 23455
Q ss_pred EEEccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 407 VLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 407 ~~v~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.++++. .+..++.+.|. ++||.+..+...+ .++++||++. .++++++++++.|.+++.
T Consensus 329 ~~~~~~---~~~~~l~~~l~~~~gi~v~~g~~f~-----~~~~~Ris~~------~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 329 LFFKVR---GDDVKFCERLLEEKKVALVPGSAFL-----KPGFVRLSFA------TSIERLTEALDRIEDFLN 387 (389)
T ss_dssp EEEECS---SCHHHHHHHHHHHHCEECEEGGGGT-----CTTEEEEECC------SCHHHHHHHHHHHHHHHT
T ss_pred EEEeCC---CCHHHHHHHHHHHCCEEEeCchhcC-----CCCeEEEEEe------CCHHHHHHHHHHHHHHHh
Confidence 666664 35677777774 8999985432211 1468999975 257899999998887663
No 56
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.94 E-value=6.1e-25 Score=223.01 Aligned_cols=313 Identities=18% Similarity=0.211 Sum_probs=219.5
Q ss_pred hhcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673 101 QFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (529)
Q Consensus 101 ~~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs 178 (529)
.++.|+|..++|+ +++.|++++...+.. + .+|| .+...+++ +.+++++|++++ +|.+++|+
T Consensus 15 ~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~-~~y~-------~~~~~~lr----~~la~~~~~~~~----~i~~t~G~ 77 (337)
T 3p1t_A 15 AAQAVCLAFNENPEAVEPRVQAAIAAAAAR-I-NRYP-------FDAEPRVM----RKLAEHFSCPED----NLMLVRGI 77 (337)
T ss_dssp CCCCEECSSCCCCSCCCHHHHHHHHHHGGG-T-TSCC-------TTHHHHHH----HHHHHHHTSCGG----GEEEESHH
T ss_pred CCCceEeeCCCCCCCCCHHHHHHHHHhhhh-h-ccCC-------CCchHHHH----HHHHHHhCcCHH----HEEEeCCH
Confidence 4467999999885 589999999877643 1 1232 12334444 678888998864 45568887
Q ss_pred -HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 009673 179 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 257 (529)
Q Consensus 179 -~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~ 257 (529)
+++..++.++ |||+|++.+|.|.++.. .+...|. +++.++++ +++.+|++++++. . ++++|++
T Consensus 78 ~~~l~~~~~~~--~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~--~-~~~~v~i 141 (337)
T 3p1t_A 78 DECFDRISAEF--SSMRFVTAWPGFDGYRA--------RIAVSGL--RHFEIGLT-DDLLLDPNDLAQV--S-RDDCVVL 141 (337)
T ss_dssp HHHHHHHHHHS--TTSEEEEESSSCSHHHH--------HHTTSCC--EEEEECBC-TTSSBCHHHHTTC--C-TTEEEEE
T ss_pred HHHHHHHHHhc--CCCeEEEeCCCcHHHHH--------HHHHcCC--EEEEecCC-CCCCCCHHHHHhh--c-CCCEEEE
Confidence 7888787777 99999999988765421 2334554 67777776 4578999999876 2 6899999
Q ss_pred cCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccc--cCCCCeEEEeeCCCcch
Q 009673 258 GASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 333 (529)
Q Consensus 258 ~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~ 333 (529)
++++||+ ..|.+++.++|+++++ +++|++|. ++...+.........+++++|+||++ +|+|.||+++++
T Consensus 142 ~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~-~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~----- 214 (337)
T 3p1t_A 142 ANPSNPTGQALSAGELDQLRQRAGK-LLIDETYV-DYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPS----- 214 (337)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTG-GGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCH-----
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCCh-hhccccccccccCCCEEEEeeCchhccCcchheEEEEeCH-----
Confidence 9898886 7899999999999997 56699965 33222211111124679999999997 588889999987
Q ss_pred hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCC
Q 009673 334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (529)
Q Consensus 334 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~ 413 (529)
++.+.+.....+ .+++....+++..+++.. ..+.+..+++.++++.+.+.|++.|+.+..+. ..++++...
T Consensus 215 -~~~~~l~~~~~~---~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~~~~~~~- 285 (337)
T 3p1t_A 215 -ELIAAMKRKQWF---CNVGTLDLHALEAALDND--RAREAHIAKTLAQRRRVADALRGLGYRVASSE--ANFVLVENA- 285 (337)
T ss_dssp -HHHHHHHTTSCT---TCSCHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCS--SSEEEEECT-
T ss_pred -HHHHHHHhhcCC---CCCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHCcCEECCCC--CeEEEEEcC-
Confidence 677777654322 233444555544455421 23567778888889999999998888776542 345555443
Q ss_pred CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 414 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 414 ~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
++..+.+.|.++||.+..+..++ .++++||++. +++|++++.+.|+++.
T Consensus 286 ---~~~~~~~~l~~~gi~v~~g~~~~-----~~~~iRis~~-------~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 286 ---AGERTLRFLRERGIQVKDAGQFG-----LHHHIRISIG-------REEDNDRLLAALAEYS 334 (337)
T ss_dssp ---TTHHHHHHHHHTTEECEEGGGGT-----CCSEEEEECC-------CHHHHHHHHHHHHHHT
T ss_pred ---CHHHHHHHHHHCCeEEEECccCC-----CCCeEEEecC-------CHHHHHHHHHHHHHHh
Confidence 34678888999999996543222 2579999964 4799999999998764
No 57
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.94 E-value=1.1e-25 Score=230.24 Aligned_cols=330 Identities=10% Similarity=0.034 Sum_probs=226.3
Q ss_pred cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (529)
Q Consensus 103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~ 182 (529)
+.+++.++...+|+.|++++...+.+... ++ +.+ +..+. ++.+.+++++++++|.+..+. .+.+.+|++|+.
T Consensus 4 ~~~~~~p~p~~~~~~v~~~~~~~~~~~~~-~~-~~~---~~~~~-~~~~~~~~~la~~~g~~~~~~--v~~~~g~t~al~ 75 (362)
T 3ffr_A 4 NKIYFTPGPSELYPTVRQHMITALDEKIG-VI-SHR---SKKFE-EVYKTASDNLKTLLELPSNYE--VLFLASATEIWE 75 (362)
T ss_dssp CCEEECSSSCCCCTTHHHHHHHHHHTTTT-TS-CTT---SHHHH-HHHHHHHHHHHHHTTCCTTEE--EEEESCHHHHHH
T ss_pred cceeccCCCcCCCHHHHHHHHHHhcCCcc-Cc-CCC---CHHHH-HHHHHHHHHHHHHhCCCCCcE--EEEeCCchHHHH
Confidence 35778888888999999888777654321 11 111 12333 333456789999999864221 233455669999
Q ss_pred HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (529)
Q Consensus 183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~ 262 (529)
.++.++++| .+++..+++.++ .+. ......|. +++.++++ +++.+|+|+|+ +++ ++|+|++++++|
T Consensus 76 ~~~~~l~~~--~~i~~~~~~~~~---~~~---~~~~~~g~--~~~~v~~~-~~~~~d~~~l~--~~~-~~~~v~~~~~~n 141 (362)
T 3ffr_A 76 RIIQNCVEK--KSFHCVNGSFSK---RFY---EFAGELGR--EAYKEEAA-FGKGFYPADIT--VPA-DAEIICLTHNET 141 (362)
T ss_dssp HHHHHHCSS--EEEEEECSHHHH---HHH---HHHHHTTC--EEEEEECC-TTCCCCGGGCC--CCT-TCCEEEEESEET
T ss_pred HHHHhccCC--cEEEEcCcHHHH---HHH---HHHHHhCC--CeEEEecC-CCCCCCHHHHh--ccC-CccEEEEEcCCC
Confidence 999999988 444444332221 110 11223354 56666665 45789999998 555 899999998888
Q ss_pred CC--CCCHHHHHHHHHHh-CCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHh
Q 009673 263 PR--DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (529)
Q Consensus 263 p~--~~d~~~i~~ia~~~-g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~ 338 (529)
|+ ..|+++|.++|++| |+++++|++|..|.... ++..+|++++|+||++.|+.| |++++++ ++.+
T Consensus 142 ptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~-----~~~~~d~~~~s~~K~~~~~~G~g~~~~~~------~~~~ 210 (362)
T 3ffr_A 142 SSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKF-----DWTKIDSVFFSVQKCFGLPAGLGVWILND------RVIE 210 (362)
T ss_dssp TTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCC-----CTTSCSEEEEETTSTTCCCSCCEEEEEEH------HHHH
T ss_pred CcceeCCHHHHHHHHHhCCCCEEEEecccccCCccc-----ChhHCcEEEEecccccCCCCceEEEEECH------HHHH
Confidence 76 78999999999999 99999999987664322 222379999999999987777 8988887 5544
Q ss_pred hhccccc--------------------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEE
Q 009673 339 AINNAVF--------------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKL 397 (529)
Q Consensus 339 ~i~~~~~--------------------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v 397 (529)
++..... ....++++...++++..+++.+...++++..+++.++++++.+.|++. |+.+
T Consensus 211 ~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 290 (362)
T 3ffr_A 211 KSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSF 290 (362)
T ss_dssp HHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEE
T ss_pred HhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCcee
Confidence 4432111 111456677777777777775544457888899999999999999986 9988
Q ss_pred ecCC---CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673 398 VSGG---SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 474 (529)
Q Consensus 398 ~~~g---t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~ 474 (529)
..+. ....++++.+.. +..++.+.|.+.||.+..+.. +..++.|||++...+ +++|++++++.|+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~g~~-----~~~~~~iRis~~~~~----~~e~i~~l~~~l~ 358 (362)
T 3ffr_A 291 GVEDAKLRSMTTIVANTTM---LPGEINKILEPFDMAVGAGYG-----SKKETQIRIANFPAH----SLEQVHKLVQTLK 358 (362)
T ss_dssp SSSCGGGBCSSEEEEEESS---CHHHHHHHHGGGTEEEEECSG-----GGTTTEEEEECCTTS----CHHHHHHHHHHHH
T ss_pred ccCChhhcCCceEEEecCC---CHHHHHHHHHHCCeEEecCcc-----ccCCCEEEEECCCCC----CHHHHHHHHHHHH
Confidence 7521 123445555543 677888888888999965421 123578999986543 5899999999998
Q ss_pred HHH
Q 009673 475 EGV 477 (529)
Q Consensus 475 ~~~ 477 (529)
+++
T Consensus 359 ~~~ 361 (362)
T 3ffr_A 359 EKI 361 (362)
T ss_dssp HHT
T ss_pred HHh
Confidence 753
No 58
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.94 E-value=6.5e-26 Score=238.34 Aligned_cols=337 Identities=13% Similarity=0.113 Sum_probs=232.7
Q ss_pred hcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCCh
Q 009673 102 FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG 177 (529)
Q Consensus 102 ~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V~~~sG 177 (529)
++.|+|..+++ ..++.|.+++...+.+. ..+|+. . .+++++.+++++++.+|. +++ +|.+++|
T Consensus 61 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~------~--~~~l~~~l~~~l~~~~g~~~~~~----~v~~~~g 127 (421)
T 3l8a_A 61 PELLQMWVADMDFLPVPEIKEAIINYGREH-IFGYNY------F--NDDLYQAVIDWERKEHDYAVVKE----DILFIDG 127 (421)
T ss_dssp TTCEECCSSCCCSCCCHHHHHHHHHHHHHC-CSSCBC------C--CHHHHHHHHHHHHHHHCCCCCGG----GEEEESC
T ss_pred CCeeecccCCCCCCCCHHHHHHHHHHHhcC-CcCCCC------C--CHHHHHHHHHHHHHHhCCCCCHH----HEEEcCC
Confidence 35688877665 36899999998877542 123322 1 145666677899999994 443 3444555
Q ss_pred H-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC--CCCCCCCHHHHHHHhhhcCCcE
Q 009673 178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD--ESTGLVDYDMLEKTAILFRPKL 254 (529)
Q Consensus 178 s-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~--~~~~~iD~d~le~~i~~~~pkl 254 (529)
+ +|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++ ..++.+|+++|++++++.++++
T Consensus 128 ~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~ 197 (421)
T 3l8a_A 128 VVPAISIALQAFSEKGDAVLINSPVYYPFAR--------TIRLNDH--RLVENSLQIINGRFEIDFEQLEKDIIDNNVKI 197 (421)
T ss_dssp HHHHHHHHHHHHSCTEEEEEEEESCCHHHHH--------HHHHTTE--EEEEEECEEETTEEECCHHHHHHHHHHTTEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCcHHHHH--------HHHHCCC--EEEeccccccCCCeeeCHHHHHHHhhccCCeE
Confidence 5 89999999999999999999987755321 2334454 55555554 2335789999999998448999
Q ss_pred EEEcCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccccCCCC-----C--cccEEEecccccc--cCCC
Q 009673 255 IIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-----K--YCDVVTTTTHKSL--RGPR 320 (529)
Q Consensus 255 Ii~~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-----~--~aDiv~~S~hK~l--~Gpr 320 (529)
|+++.++||+ . .++++|+++|++||++||+|++|. ++...+....++ + ..++++.|+||++ +|.+
T Consensus 198 vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~ 276 (421)
T 3l8a_A 198 YLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQ-DLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTK 276 (421)
T ss_dssp EEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGC
T ss_pred EEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccc-ccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhh
Confidence 9999888886 3 368999999999999999999964 444333222222 1 2348889999997 5778
Q ss_pred CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEec
Q 009673 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVS 399 (529)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~ 399 (529)
.|+++++++ ++.+.+.........++++...++++..+++.. ....++..+++.++++.+.+.|++ .++.++.
T Consensus 277 ~G~~~~~~~-----~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~ 350 (421)
T 3l8a_A 277 NSFAIIQNE-----SLRRKFQYRQLANNQHEVPTVGMIATQAAFQYG-KPWLEELKTVIEGNIKLVIKELEAKTKIKVME 350 (421)
T ss_dssp CEEEECCSH-----HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSCEEEC
T ss_pred eEeEEcCCH-----HHHHHHHHHHHhcccCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhCCCceEeC
Confidence 899999842 676666543322223345656666666677642 233477888889999999999988 5888876
Q ss_pred CCCCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 400 GGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 400 ~gt~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+ ..+++.|+++...+.+..++.+.| +++||.+..+...+ +..++.+||+++ .++++++++++.|.++++
T Consensus 351 ~-~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~iRi~~~------~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 351 P-EGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFG---KEGKYFARLNVA------TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp C-SBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGC---GGGTTEEEEECC------SCHHHHHHHHHHHHHHC-
T ss_pred C-CeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhC---CCCCCEEEEEec------CCHHHHHHHHHHHHHHHh
Confidence 4 234556688865455666676666 57899996543222 223578999965 358999999999988754
No 59
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.94 E-value=1.5e-25 Score=233.14 Aligned_cols=337 Identities=15% Similarity=0.134 Sum_probs=228.8
Q ss_pred cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCCh-
Q 009673 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG- 177 (529)
Q Consensus 103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V~~~sG- 177 (529)
+.|+|..+++ .+++.|.+++...+.+. ..+|+. + ..++++...+++.+.+|. +++ +|.+++|
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-----~---~~~l~~~la~~l~~~~g~~~~~~----~v~~t~g~ 98 (399)
T 1c7n_A 32 EVVPLSVADMEFKNPPELIEGLKKYLDET-VLGYTG-----P---TEEYKKTVKKWMKDRHQWDIQTD----WIINTAGV 98 (399)
T ss_dssp TCCCCCSSSCSSCCCHHHHHHHHHHHHHC-CCSSBC-----C---CHHHHHHHHHHHHHHHCCCCCGG----GEEEESSH
T ss_pred CceeeeecCCCCCCCHHHHHHHHHHHhcC-CCCCCC-----C---cHHHHHHHHHHHHHHhCCCCChh----hEEEcCCH
Confidence 5678877776 35789999998877532 122322 1 346666666788877884 443 3445666
Q ss_pred HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC--CCCCCHHHHHHHhhhcCCcEE
Q 009673 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAILFRPKLI 255 (529)
Q Consensus 178 s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~--~~~iD~d~le~~i~~~~pklI 255 (529)
++|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++++ ++.+|+++|++.++..++++|
T Consensus 99 ~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v 168 (399)
T 1c7n_A 99 VPAVFNAVREFTKPGDGVIIITPVYYPFFM--------AIKNQER--KIIECELLEKDGYYTIDFQKLEKLSKDKNNKAL 168 (399)
T ss_dssp HHHHHHHHHHHCCTTCEEEECSSCCTHHHH--------HHHTTTC--EEEECCCEEETTEEECCHHHHHHHHTCTTEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCC--EEEecccccCCCCEEEcHHHHHHHhccCCCcEE
Confidence 599999999999999999999988765421 2334454 6667666422 246999999999984478999
Q ss_pred EEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC-------cccEEEecccccc--cCCCC
Q 009673 256 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-------YCDVVTTTTHKSL--RGPRG 321 (529)
Q Consensus 256 i~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-------~aDiv~~S~hK~l--~Gprg 321 (529)
+++.++||+ ..+ +++|.++|++||++||+|++|... ...+....++. ..+++++|+||++ +|+|.
T Consensus 169 ~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 247 (399)
T 1c7n_A 169 LFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDL-IMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGM 247 (399)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTC-BCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCC
T ss_pred EEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCCCCcccHHHcCccccCcEEEEEeChhhccccchhe
Confidence 988888886 556 899999999999999999997643 32222111221 2348899999987 67788
Q ss_pred eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-c-CcEEec
Q 009673 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-L-GYKLVS 399 (529)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~-G~~v~~ 399 (529)
|+++++++ ++.+.+.....+...++++....+++..+++.. ...+++..+++.++++.+.+.|++ . |+.+..
T Consensus 248 G~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 321 (399)
T 1c7n_A 248 SNIIIKNP-----DIRERFTKSRDATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPL 321 (399)
T ss_dssp EEEECCCH-----HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCC
T ss_pred EEEEECCH-----HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEec
Confidence 99999753 566666543332223344444555555566542 233577788889999999999987 4 787654
Q ss_pred CCCCCceEEEccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 400 GGSDNHLVLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 400 ~gt~~~~~~v~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+ ..+++.|+++...+.+..++.+.|. ++||.+..+...+ +..++++||++.. .+++++++++.|.++++
T Consensus 322 ~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~~------~~~~l~~~l~~l~~~l~ 391 (399)
T 1c7n_A 322 I-EGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFG---DGGIGFERINLAA------PSSVIQESLERLNKALK 391 (399)
T ss_dssp C-SBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGC---GGGTTEEEEECCS------CHHHHHHHHHHHHHHHH
T ss_pred C-CceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccC---CCCCCeEEEEecc------CHHHHHHHHHHHHHHHH
Confidence 3 2344556777533456777777774 8999986432211 1235789999753 36889999999988875
Q ss_pred H
Q 009673 479 I 479 (529)
Q Consensus 479 ~ 479 (529)
.
T Consensus 392 ~ 392 (399)
T 1c7n_A 392 D 392 (399)
T ss_dssp H
T ss_pred H
Confidence 4
No 60
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.94 E-value=1.1e-25 Score=234.55 Aligned_cols=339 Identities=14% Similarity=0.059 Sum_probs=227.9
Q ss_pred ceeEecCC-C--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 104 SLELIASE-N--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 104 ~i~L~ase-n--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
.|+|..++ + .+++.|++++...+.+....+|+.. .| ..++.+.+.+++++++|.+.+.- -+|.+++|+ +
T Consensus 41 ~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g---~~~l~~~l~~~l~~~~g~~~~~~-~~i~~~~g~~~ 113 (407)
T 3nra_A 41 PVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEY---RG---DLGIRDLLAPRLAAFTGAPVDAR-DGLIITPGTQG 113 (407)
T ss_dssp CEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCT---TC---CHHHHHHHHHHHHHHHTSCCCTT-TSEEEESHHHH
T ss_pred eeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCC---CC---CHHHHHHHHHHHHHHhCCCCCCC-CcEEEeCCcHH
Confidence 46665533 3 3688999999887754222223221 12 23455556688999999853110 134445555 9
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-----CCCCCCCHHHHHHHhhhcCCcE
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-----ESTGLVDYDMLEKTAILFRPKL 254 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-----~~~~~iD~d~le~~i~~~~pkl 254 (529)
|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++ .+++.+|+++|++.+++ ++++
T Consensus 114 a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~ 182 (407)
T 3nra_A 114 ALFLAVAATVARGDKVAIVQPDYFANRK--------LVEFFEG--EMVPVQLDYVSADETRAGLDLTGLEEAFKA-GARV 182 (407)
T ss_dssp HHHHHHHTTCCTTCEEEEEESCCTHHHH--------HHHHTTC--EEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-TCCE
T ss_pred HHHHHHHHhCCCCCEEEEcCCcccchHH--------HHHHcCC--EEEEeecccccccCcCCCcCHHHHHHHHhh-CCcE
Confidence 9999999999999999999988765431 2334555 56666663 24678999999999988 8999
Q ss_pred EEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC-------CcccEEEecccccc--cCCC
Q 009673 255 IIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-------KYCDVVTTTTHKSL--RGPR 320 (529)
Q Consensus 255 Ii~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-------~~aDiv~~S~hK~l--~Gpr 320 (529)
|+++.++||+ ..+ +++|+++|++||+++|+|++|..+. ..+....++ ...++++.|+||++ +|.|
T Consensus 183 v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~-~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r 261 (407)
T 3nra_A 183 FLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLR-YAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYR 261 (407)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSB-CTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGC
T ss_pred EEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccc-cCCCCCCChhhcCcccCCcEEEEeCcccccCCCeee
Confidence 9988888886 556 8999999999999999999976433 222211111 13458999999997 5788
Q ss_pred CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEec
Q 009673 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 399 (529)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~ 399 (529)
.|++++++ ++.+.+.........+++ ....+++..+++. ....+++..+++.++++.+.+.|++. |+.+..
T Consensus 262 ~G~~~~~~------~~~~~l~~~~~~~~~~~~-~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 333 (407)
T 3nra_A 262 LGVAFGSR------AIIARMEKLQAIVSLRAA-GYSQAVLRGWFDE-APGWMEDRIARHQAIRDELLHVLRGCEGVFART 333 (407)
T ss_dssp CEEEEECH------HHHHHHHHHHHHHTSSSC-HHHHGGGGGTTCC-CTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCC
T ss_pred EEEEEcCH------HHHHHHHHHHhhhccCCC-hHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHhcCCCceecc
Confidence 89999987 676666543222222232 2233333323331 12345778888899999999999885 887755
Q ss_pred CCCCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 400 GGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 400 ~gt~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+. ..+++++++...+.+..++.+.| +++||.+..+..++ +..++.|||++.. ++++++++++.|.++++
T Consensus 334 ~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~~------~~~~i~~~~~~l~~~~~ 403 (407)
T 3nra_A 334 PQ-AGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFS---PHTADSVRLNFSQ------DHEAAVAAARRIVTLVE 403 (407)
T ss_dssp CS-BSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTC---TTCTTBEEEECCS------CHHHHHHHHHHHHHHHH
T ss_pred CC-eeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEEeCC------CHHHHHHHHHHHHHHHH
Confidence 42 34566777765456777777777 56799996543332 2346889999752 58999999999998876
Q ss_pred H
Q 009673 479 I 479 (529)
Q Consensus 479 ~ 479 (529)
.
T Consensus 404 ~ 404 (407)
T 3nra_A 404 R 404 (407)
T ss_dssp H
T ss_pred H
Confidence 4
No 61
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.94 E-value=1e-24 Score=229.42 Aligned_cols=361 Identities=12% Similarity=0.050 Sum_probs=236.8
Q ss_pred hcccCChHHHHHHHHHHHHhhcceeEecCCC--CCcHHHHHHHhhhhhcc--CCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 009673 82 SLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNK--YSEGLPGKRYYGGNEYIDELETLCQKRA 157 (529)
Q Consensus 82 ~l~~~d~~~~~~~~~e~~~~~~~i~L~asen--~~~~~V~eal~~~l~~~--y~~G~p~~r~~~g~~~~d~lE~~a~~~l 157 (529)
++...++.++..+.+.. ...+.|+|..+++ ..++.|++++...+... ...+|+. .....++++.+.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~------~~g~~~l~~~la~~l 90 (429)
T 1yiz_A 18 RYQGSTKSVWVEYIQLA-AQYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTR------GFGHPRLVQALSKLY 90 (429)
T ss_dssp SCCCCTTCHHHHHHHHH-HHHCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCC------SSCCHHHHHHHHHHH
T ss_pred HhhhCCchHHHHHHHHh-ccCCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCC------CCCcHHHHHHHHHHH
Confidence 34445555665554432 2346788887765 35799999998877541 0112322 111345666666788
Q ss_pred HHHcCCCCCCCce-eeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-
Q 009673 158 LAAFNLDENKWGV-NVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES- 234 (529)
Q Consensus 158 a~~~g~~~~~~~~-~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~- 234 (529)
.+.+|.+.+. - +|.+++|+ +|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++++
T Consensus 91 ~~~~g~~~~~--~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~ 158 (429)
T 1yiz_A 91 SQLVDRTINP--MTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEP--------MVKAAGG--IPRFIPLKPNK 158 (429)
T ss_dssp HHHHTSCCCT--TTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECBCCC
T ss_pred HHHhCCCCCC--cCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEEeCCccc
Confidence 8878854211 1 34456665 99999999999999999999988765421 2334454 5666666544
Q ss_pred --------CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCC
Q 009673 235 --------TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP 301 (529)
Q Consensus 235 --------~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~ 301 (529)
++.+|+++|++.+++ ++++|++++++||+ .. ++++|.++|++||++||+|++|.. +...+....+
T Consensus 159 ~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~ 236 (429)
T 1yiz_A 159 TGGTISSADWVLDNNELEALFNE-KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEH-MVFEPFEHIR 236 (429)
T ss_dssp SSSSEEGGGCBCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBCTTSCCCC
T ss_pred ccccccccCcccCHHHHHHHhcc-CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccc-cccCCCCCcC
Confidence 467999999999976 88999988888886 44 489999999999999999999653 3332211111
Q ss_pred ---C---CcccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHH-----hc
Q 009673 302 ---F---KYCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH-----AQ 368 (529)
Q Consensus 302 ---~---~~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~-----~~ 368 (529)
+ .+.|++++|+||++ +|.|.|++++++ ++.+.+.........+. +....+++..+|+. ..
T Consensus 237 ~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~ 309 (429)
T 1yiz_A 237 ICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPE------ALLKNLQMVHQNCVYTC-ATPIQEAIAVGFETELKRLKS 309 (429)
T ss_dssp GGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCH------HHHHHHHHHHHTTTCCC-CHHHHHHHHHHHHHHHTTTTS
T ss_pred hhhccCCcCceEEEecchhccCCCCcceEEEEeCH------HHHHHHHHHHhhcccCC-ChHHHHHHHHHHhcccccccc
Confidence 1 14689999999987 477889999987 67666654321111222 33344455556765 31
Q ss_pred -CchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCC-----------CcHHHHHHhH-hcCCeEEcCC
Q 009673 369 -SPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG-----------IDGARVEKIL-DMASITLNKN 435 (529)
Q Consensus 369 -~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~-----------i~~~~~~~~L-~~~GI~v~~~ 435 (529)
...+++..+++.++++.+.+.|.+.|+.+..+. .++++++++.... .+..++.+.| +++||.+..+
T Consensus 310 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g 388 (429)
T 1yiz_A 310 PECYFNSISGELMAKRDYMASFLAEVGMNPTVPQ-GGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPP 388 (429)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHTCEEEECS-BSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-cceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCc
Confidence 234577888889999999999988888876542 3456777775321 3455666655 5899999543
Q ss_pred CCCCCCC--CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 436 SVPGDKS--ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 436 ~~Pg~~~--~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
...+... ...+++|||++. .++++++++++.|.+++
T Consensus 389 ~~f~~~~~~~~~~~~iRis~~------~~~e~i~~~l~~l~~~l 426 (429)
T 1yiz_A 389 SAFYSEPNKHLGEDFVRYCFF------KKDENLQKAAEILRKWK 426 (429)
T ss_dssp GGGSCGGGGGGTTTEEEEECC------SCHHHHHHHHHHHHHHS
T ss_pred hHhCCCcccCCCCCeEEEEec------CCHHHHHHHHHHHHHhc
Confidence 2111000 012578999975 25899999999998765
No 62
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.94 E-value=2.3e-25 Score=233.28 Aligned_cols=337 Identities=14% Similarity=0.097 Sum_probs=222.7
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC--C-CCCceeeecCCh
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--E-NKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~--~-~~~~~~V~~~sG 177 (529)
+.|+|..+++. .++.+++++...+......+|+. .....++++.+.+++.+.+|.+ + ++ + +..++|
T Consensus 38 ~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~l~~~ia~~~~~~~g~~~~~~~~--v-~~t~g~ 108 (412)
T 2x5d_A 38 DIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYST------SRGIPRLRRAISHWYRDRYDVQIDPESE--A-IVTIGS 108 (412)
T ss_dssp CCEECSSCCCCSCCCHHHHHHHHHTC---------C------TTCCHHHHHHHHHHHHHHHCCCCCTTTS--E-EEESCH
T ss_pred CEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCCcHHHHHHHHHHHHHHhCCCCCCCcC--E-EEcCCh
Confidence 46888877753 57999999987764321122321 1223466666667777777863 3 22 1 333445
Q ss_pred HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEE
Q 009673 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLII 256 (529)
Q Consensus 178 s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi 256 (529)
++|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++++ ++.+|+++|++.+++ ++++|+
T Consensus 109 ~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~ 177 (412)
T 2x5d_A 109 KEGLAHLMLATLDHGDTILVPNPSYPIHIY--------GAVIAGA--QVRSVPLVPGIDFFNELERAIRESIP-KPRMMI 177 (412)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHHTC--EEEEEECSTTSCHHHHHHHHHHTEES-CCSEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEeecCCccCCCCCHHHHHHhccc-CceEEE
Confidence 599999999999999999999998765421 2233454 6666667644 345899999999986 899999
Q ss_pred EcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCC---C---CcccEEEecccccc--cCCCCeE
Q 009673 257 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---F---KYCDVVTTTTHKSL--RGPRGGM 323 (529)
Q Consensus 257 ~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~---~~aDiv~~S~hK~l--~GprgG~ 323 (529)
++.++||+ .. ++++|.++|++||+++|+|++|..+. ..+....+ + ...|++++|+||++ +|+|.|+
T Consensus 178 l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~-~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 256 (412)
T 2x5d_A 178 LGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIV-YDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGF 256 (412)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCB-CTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEE
T ss_pred ECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccc-cCCCCCCChhhccCccCcEEEEecCccccCCcccceEE
Confidence 98888886 44 37889999999999999999976543 22211111 1 14579999999998 5778899
Q ss_pred EEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCC
Q 009673 324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 403 (529)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~ 403 (529)
+++++ ++.+.+......... +++....+++..+|+.. ...+++..+++.++++.+.+.|++.|+.+..+ ..
T Consensus 257 ~~~~~------~~~~~l~~~~~~~~~-~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~ 327 (412)
T 2x5d_A 257 MVGNP------ELVSALARIKSYHDY-GTFTPLQVAAIAALEGD-QQCVRDIARQYQQRRDVLVKGLREAGWMVENP-KA 327 (412)
T ss_dssp EEECH------HHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCC-SB
T ss_pred EEcCH------HHHHHHHHHHhhhcc-CCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCEecCC-Ce
Confidence 99977 666665543221112 22333444444456532 23457788888999999999998888877643 23
Q ss_pred CceEEEccCCCCC---cHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 404 NHLVLVDLRPMGI---DGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 404 ~~~~~v~~~~~~i---~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
++++++++. .++ +..++.+.| +++||.+..+..++ +..++++||++.. ++++++++++.|.+++..
T Consensus 328 g~~~~~~~~-~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~---~~~~~~iRis~~~------~~~~l~~~l~~l~~~l~~ 397 (412)
T 2x5d_A 328 SMYVWAKIP-EPYAHLGSLEFAKKLLQDAKVSVSPGIGFG---DYGDDHVRFALIE------NRDRLRQAVRGIKAMFRA 397 (412)
T ss_dssp SSEEEEECC-TTTGGGCHHHHHHHHHHHHCEECEEGGGGC---GGGTTEEEEECCS------CHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEcC-CccCCCCHHHHHHHHHHHCCEEEeCchhhC---CCCCCeEEEEecC------CHHHHHHHHHHHHHHHHh
Confidence 456777774 344 566666666 56899986543221 1235789999753 579999999999988764
No 63
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.94 E-value=3.3e-25 Score=230.67 Aligned_cols=333 Identities=15% Similarity=0.181 Sum_probs=227.8
Q ss_pred cceeEecCCC--C-CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 009673 103 KSLELIASEN--F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (529)
Q Consensus 103 ~~i~L~asen--~-~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~ 179 (529)
..|+|..+++ + +++.+++++...+.. +..++.+.++..|.. ++.+.+++++++++|.+. .+.+++|++
T Consensus 44 ~~idl~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~---~~~~~l~~~la~~~g~~~-----v~~~~ggt~ 114 (398)
T 3a2b_A 44 RVLMFGSNSYLGLTTDTRIIKAAQDALEK-YGTGCAGSRFLNGTL---DIHVELEEKLSAYVGKEA-----AILFSTGFQ 114 (398)
T ss_dssp EEEECSCSCTTCGGGCHHHHHHHHHHHHH-HCSCCCSBTTTTCCC---HHHHHHHHHHHHHHTCSE-----EEEESSHHH
T ss_pred eEEEeecccccCCCCCHHHHHHHHHHHHH-cCCCCCCcCcccCCc---HHHHHHHHHHHHHhCCCc-----EEEECCHHH
Confidence 4577777654 2 688999999887743 222333222222321 233344588899999752 344567779
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc---CCcEEE
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLII 256 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~---~pklIi 256 (529)
|+..++.++++|||+|++.+|.|+++.. .+...|. +++.++. +|+++|++.+++. ++++|+
T Consensus 115 a~~~~~~~~~~~gd~V~~~~p~~~~~~~--------~~~~~g~--~~~~v~~------~d~~~l~~~l~~~~~~~~~~v~ 178 (398)
T 3a2b_A 115 SNLGPLSCLMGRNDYILLDERDHASIID--------GSRLSFS--KVIKYGH------NNMEDLRAKLSRLPEDSAKLIC 178 (398)
T ss_dssp HHHHHHHHSSCTTCEEEEETTCCHHHHH--------HHHHSSS--EEEEECT------TCHHHHHHHHHTSCSSSCEEEE
T ss_pred HHHHHHHHHhCCCCEEEECCccCHHHHH--------HHHHcCC--ceEEeCC------CCHHHHHHHHHhhccCCceEEE
Confidence 9999999999999999999998765531 2344554 5666543 6899999999864 689999
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccc-cccC-C--CCC-cccEEEecccccccCCCCeEEEeeCC
Q 009673 257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-SVVA-D--PFK-YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (529)
Q Consensus 257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~~~~-~--~~~-~aDiv~~S~hK~l~GprgG~i~~~~~ 329 (529)
+++++||+ ..++++|.++|++||+++|+|++|..+.... +... . .+. .+|++++|+||+++ |.|||+++++
T Consensus 179 ~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~- 256 (398)
T 3a2b_A 179 TDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLGGFVAGDA- 256 (398)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSCEEEEECH-
T ss_pred EeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEeccccccc-CCCcEEEeCH-
Confidence 98888875 7799999999999999999999987664311 1100 0 111 36899999999984 6679999987
Q ss_pred CcchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEE
Q 009673 330 PVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~ 408 (529)
++.+.+..... ....++++..+.+++..+++.. ...++..+++.++++.+.+.|++.|+++..+ ..++++
T Consensus 257 -----~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~g~~~~ 327 (398)
T 3a2b_A 257 -----DVIDFLKHNARSVMFSASMTPASVASTLKALEII--QNEPEHIEKLWKNTDYAKAQLLDHGFDLGAT--ESPILP 327 (398)
T ss_dssp -----HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHHHHHHHTTCCBCSC--CSSEEE
T ss_pred -----HHHHHHHHhcccceecCCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHhcCCCcCCC--CCCEEE
Confidence 67666654211 1122344555555444566653 2345678888999999999999888877654 246667
Q ss_pred EccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 409 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+.+. .+.+..++.+.|.+.||.+..+..++. +...+++||++... ++++|++++++.|+++++
T Consensus 328 ~~~~-~~~~~~~l~~~l~~~gi~v~~~~~~~~--~~~~~~iRis~~~~----~~~e~i~~~~~~l~~~l~ 390 (398)
T 3a2b_A 328 IFIR-SNEKTFWVTKMLQDDGVFVNPVVSPAV--PAEESLIRFSLMAT----HTYDQIDEAIEKMVKVFK 390 (398)
T ss_dssp EECC-CHHHHHHHHHHHHHTTEECEEECTTTS--CGGGCEEEEECCTT----CCHHHHHHHHHHHHHHHH
T ss_pred EEcC-CHHHHHHHHHHHHHCCcEEEeeCCCCC--CCCCceEEEEEeCC----CCHHHHHHHHHHHHHHHH
Confidence 7764 233456677777777999865433221 12357899997643 358999999999998875
No 64
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.94 E-value=3.2e-24 Score=221.21 Aligned_cols=322 Identities=17% Similarity=0.151 Sum_probs=227.0
Q ss_pred eeEecCCCC--CcHHHHHHHhhhhhccC--CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 105 LELIASENF--TSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 105 i~L~asen~--~~~~V~eal~~~l~~~y--~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
|+|..+++. .++.+++++...+.+.. ..+|+. ... .++++...+++.+.+|...+. .+|.+++|+ +
T Consensus 33 idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~------~~~-~~l~~~la~~l~~~~g~~~~~--~~v~~~~G~~~ 103 (369)
T 3cq5_A 33 IRLNTNENPYPPSEALVADLVATVDKIATELNRYPE------RDA-VELRDELAAYITKQTGVAVTR--DNLWAANGSNE 103 (369)
T ss_dssp EECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCC------TTC-HHHHHHHHHHHHHHHCCCCCG--GGEEEESHHHH
T ss_pred eeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCC------ccH-HHHHHHHHHhhhhcccCCCCh--HhEEECCChHH
Confidence 788777764 57899999988775421 112322 112 466766667777776654221 245667776 8
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
++..++.++++|||+|++++|.|.++.. .+...|. +++.++.+ +++.+|++++++.+++.++++|++++
T Consensus 104 al~~~~~~l~~~gd~Vl~~~~~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~ 172 (369)
T 3cq5_A 104 ILQQLLQAFGGPGRTALGFQPSYSMHPI--------LAKGTHT--EFIAVSRG-ADFRIDMDVALEEIRAKQPDIVFVTT 172 (369)
T ss_dssp HHHHHHHHHCSTTCEEEEEESSCTHHHH--------HHHHTTC--EEEEEECC-TTSSCCHHHHHHHHHHHCCSEEEEES
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCC--EEEEecCC-cCCCCCHHHHHHHhhccCCCEEEEeC
Confidence 8989999999999999999998865421 2334454 56666665 45689999999999765799999988
Q ss_pred CCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--c-ccEEEecccccc--cCCCCeEEEeeCCCcc
Q 009673 260 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPVL 332 (529)
Q Consensus 260 s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~-aDiv~~S~hK~l--~GprgG~i~~~~~~~~ 332 (529)
++||+ ..|.+++.++|+.+++++|+|++|..+........ ..+ . .+++++|+||++ +|+|.|++++++
T Consensus 173 ~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~---- 247 (369)
T 3cq5_A 173 PNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATT-LLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP---- 247 (369)
T ss_dssp SCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGG-GTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT----
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHH-HHhhCCCCEEEEEechHhcCCcccceEEEEeCH----
Confidence 88875 78999999999999999999999765432111010 011 2 458999999998 577889999987
Q ss_pred hhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccC
Q 009673 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR 412 (529)
Q Consensus 333 ~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~ 412 (529)
++.+.+.....++ +++....+++..+++.. ..+++..+++.++++.+.+.|++.|+.+..+ ..+++++++.
T Consensus 248 --~~~~~l~~~~~~~---~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~~~~~~ 318 (369)
T 3cq5_A 248 --AFIDAVMLVRLPY---HLSALSQAAAIVALRHS--ADTLGTVEKLSVERVRVAARLEELGYAVVPS--ESNFVFFGDF 318 (369)
T ss_dssp --HHHHHHHTTSCTT---CSCHHHHHHHHHHHHTH--HHHHTHHHHHHHHHHHHHHHHHHHTCEEECC--SSSEEEEECC
T ss_pred --HHHHHHHHcCCCC---CCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhCCCEECCC--CCeEEEEECC
Confidence 7777776543332 23444444444456531 2346778888899999999998888887643 3456677764
Q ss_pred CCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 413 PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 413 ~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.+..++.+.|.++||.+.. |. .++++||++. +++|++++++.|++++.
T Consensus 319 ---~~~~~l~~~l~~~gi~v~~----~~----~~~~iRis~~-------~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 319 ---SDQHAAWQAFLDRGVLIRD----VG----IAGHLRTTIG-------VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp ---SSHHHHHHHHHHTTEECBC----CS----CTTEEEEECC-------CHHHHHHHHHHHHHHHT
T ss_pred ---CCHHHHHHHHHHCCEEEEE----CC----CCCeEEEEeC-------CHHHHHHHHHHHHHHHh
Confidence 3567788888899999853 31 2578999964 47999999999988764
No 65
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.94 E-value=9.7e-25 Score=227.03 Aligned_cols=336 Identities=14% Similarity=0.088 Sum_probs=222.2
Q ss_pred cceeEecCCC--CCcHHHHHHHhhhhhccC---CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673 103 KSLELIASEN--FTSRAVMEAVGSCLTNKY---SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~asen--~~~~~V~eal~~~l~~~y---~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG 177 (529)
+.|+|..+.+ .+++.+.+++...+.+.. ..+|+. .....++++...+++.+.+|.+.+. .+|.+++|
T Consensus 36 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~------~~g~~~lr~~la~~l~~~~g~~~~~--~~i~~~~g 107 (398)
T 3ele_A 36 NVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTS------AQGDVETRAAIAEFLNNTHGTHFNA--DNLYMTMG 107 (398)
T ss_dssp GCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCC------TTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEESS
T ss_pred CeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCC------CCCcHHHHHHHHHHHHHHhCCCCCh--HHEEEccC
Confidence 5688877654 367899999988775421 123322 1112456666668888888854321 24455666
Q ss_pred -HHHHHHHHHhhcCCC-CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673 178 -SPANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (529)
Q Consensus 178 -s~A~~~~l~all~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI 255 (529)
++|+..++.++++|| |+|++.+|.|.++.. .+...|. +++.++++++++.+|+|+|++.+++ ++++|
T Consensus 108 ~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v 176 (398)
T 3ele_A 108 AAASLSICFRALTSDAYDEFITIAPYFPEYKV--------FVNAAGA--RLVEVPADTEHFQIDFDALEERINA-HTRGV 176 (398)
T ss_dssp HHHHHHHHHHHHCCSTTCEEEEESSCCTHHHH--------HHHHTTC--EEEEECCCTTTSSCCHHHHHHTCCT-TEEEE
T ss_pred HHHHHHHHHHHHcCCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEEecCCcCCcCCHHHHHHHhCc-CCCEE
Confidence 599999999999999 999999998765421 2334454 6777777766679999999999987 89999
Q ss_pred EEcCCCCCC--CCC---HHHHHHHHHH------hCCEEEEeccccccccccc-ccCCCCC--cccEEEecccccc--cCC
Q 009673 256 IAGASAYPR--DFD---YPRMRQIADA------VGALLMMDMAHISGLVAAS-VVADPFK--YCDVVTTTTHKSL--RGP 319 (529)
Q Consensus 256 i~~~s~~p~--~~d---~~~i~~ia~~------~g~~livD~ah~~Gli~~~-~~~~~~~--~aDiv~~S~hK~l--~Gp 319 (529)
+++.++||+ ..+ +++|.++|++ ||+++|+|++|.. +...+ ..+.... ..+++++|+||++ +|+
T Consensus 177 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 255 (398)
T 3ele_A 177 IINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYRE-IVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGE 255 (398)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTT-CBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTT
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccc-cccCCCCcCChHhhcCCeEEEEehhhcCCCccc
Confidence 998888887 555 6777789999 9999999999653 33332 1121111 3458999999997 678
Q ss_pred CCeEEEeeCCCcchhHHHhhhcccc-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe
Q 009673 320 RGGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV 398 (529)
Q Consensus 320 rgG~i~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~ 398 (529)
|.||++++++......+.+.+.... ..+.. +++....+++..+++ .. ...+++.++++.+.+.|++.|+.+.
T Consensus 256 r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~---~~---~~~~~~~~~~~~l~~~L~~~g~~~~ 328 (398)
T 3ele_A 256 RIGYVLVPDEVYDKAELYAAVCGAGRALGYV-CAPSLFQKMIVKCQG---AT---GDINAYKENRDLLYEGLTRIGYHCF 328 (398)
T ss_dssp CCEEEECCTTSTTHHHHHHHHHHHHHHTTCC-CSCHHHHHHHTTCTT---CC---CCHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred eeEEEEEcchhhhHHHHHHHHHHHhhhcccc-CCCHHHHHHHHHHhc---CH---HHHHHHHHHHHHHHHHHHHcCCeec
Confidence 8899999884211001222222111 11111 222222222222222 11 1356777889999999988888877
Q ss_pred cCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 399 SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 399 ~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.+. .+.++|+++.. .+..++.+.|.++||.+..+..++ .++++||++. .++++++++++.|.++++
T Consensus 329 ~~~-~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~-----~~~~iRis~~------~~~e~i~~~l~~l~~~l~ 394 (398)
T 3ele_A 329 KPD-GAFYMFVKALE--DDSNAFCEKAKEEDVLIVAADGFG-----CPGWVRISYC------VDREMIKHSMPAFEKIYK 394 (398)
T ss_dssp CCS-BSSEEEEECSS--SCHHHHHHHHHTTTEECEESGGGT-----CTTEEEEECC------SCHHHHHHHHHHHHHHHH
T ss_pred CCC-eeEEEEEEcCC--CCHHHHHHHHHHCCEEEeCccccC-----CCCeEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 542 34556777642 367778888999999996543221 2579999963 358999999999998876
Q ss_pred H
Q 009673 479 I 479 (529)
Q Consensus 479 ~ 479 (529)
.
T Consensus 395 ~ 395 (398)
T 3ele_A 395 K 395 (398)
T ss_dssp H
T ss_pred H
Confidence 4
No 66
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.94 E-value=3e-25 Score=232.20 Aligned_cols=338 Identities=17% Similarity=0.113 Sum_probs=224.5
Q ss_pred hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-H
Q 009673 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (529)
Q Consensus 102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s 178 (529)
++.|+|..+++. .++.+++++ ..+.+.. .+|+. .....++++...+++.+.+|.+.+. .+|.+++| +
T Consensus 43 ~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~-~~y~~------~~g~~~l~~~la~~~~~~~g~~~~~--~~v~~~~g~t 112 (409)
T 2gb3_A 43 VRIHHLNIGQPDLKTPEVFFERI-YENKPEV-VYYSH------SAGIWELREAFASYYKRRQRVDVKP--ENVLVTNGGS 112 (409)
T ss_dssp CEEEECSSCCCCSCCCTHHHHHH-HHTCCSS-CCCCC------TTCCHHHHHHHHHHHHHTSCCCCCG--GGEEEESHHH
T ss_pred CCEEeccCCCCCCCCCHHHHHHH-HHHhcCC-CCCCC------CCCcHHHHHHHHHHHHHHhCCCCCH--HHEEEeCCHH
Confidence 356888777653 578999999 7774321 23322 1223466766667777767754321 13444555 5
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEEEE
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIA 257 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pklIi~ 257 (529)
+|+..++.++++|||+|+++++.|.++.. .+...|. +++.+++++ +++.+ +++|++.+++ ++++|++
T Consensus 113 ~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~-~~~l~~~l~~-~~~~v~~ 180 (409)
T 2gb3_A 113 EAILFSFAVIANPGDEILVLEPFYANYNA--------FAKIAGV--KLIPVTRRMEEGFAI-PQNLESFINE-RTKGIVL 180 (409)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHHTC--EEEEEECCGGGTSCC-CTTGGGGCCT-TEEEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEeccCCCCCCcc-HHHHHHhhCc-CCeEEEE
Confidence 99999999999999999999998765421 2334454 666666653 23455 8889988877 8899998
Q ss_pred cCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC---CcccEEEecccccc--cCCCCeEEEee
Q 009673 258 GASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSL--RGPRGGMIFFK 327 (529)
Q Consensus 258 ~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~~aDiv~~S~hK~l--~GprgG~i~~~ 327 (529)
++++||+ .. ++++|.++|+++|++||+|++|..+. ..+.....+ ...|++++|+||++ +|.|.|+++++
T Consensus 181 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~ 259 (409)
T 2gb3_A 181 SNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIV-FRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITR 259 (409)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCB-CSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECS
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccc-cCCCCCCccccCCCCEEEEecchhccCCccceEEEEEEC
Confidence 8888875 33 58999999999999999999976543 222111112 24689999999998 56788999998
Q ss_pred CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEE-ecCCCCCce
Q 009673 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL-VSGGSDNHL 406 (529)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v-~~~gt~~~~ 406 (529)
++ ++.+.+........ +++....+++..+|+. ....+++..+++.++++.+.+.|++.|+.+ ..+ ..+.+
T Consensus 260 ~~-----~l~~~l~~~~~~~~--~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~ 330 (409)
T 2gb3_A 260 NE-----ELISHAMKLAQGRL--APPLLEQIGSVGLLNL-DDSFFDFVRETYRERVETVLKKLEEHGLKRFTKP-SGAFY 330 (409)
T ss_dssp CH-----HHHHHHHHHHHHSC--CCCHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCC-SBSSE
T ss_pred cH-----HHHHHHHHHHhccC--CCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHcCceeeeCC-CeeEE
Confidence 73 45555543322222 3344444444445542 122356778888999999999998888877 443 23455
Q ss_pred EEEccCCCCCcHHHHHHhHhcC------CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 407 VLVDLRPMGIDGARVEKILDMA------SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 407 ~~v~~~~~~i~~~~~~~~L~~~------GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
.++++. +.+..++.+.|.+. ||.+..+...+...+..++++||+++ .++++++++++.|+++++.
T Consensus 331 ~~~~~~--~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~------~~~e~i~~~~~~l~~~l~~ 401 (409)
T 2gb3_A 331 ITAELP--VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV------LEKDLLSRAIDVLMEGLKM 401 (409)
T ss_dssp EEEECS--SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC------SCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeC--CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC------CCHHHHHHHHHHHHHHHHH
Confidence 666775 45667777777554 99986542221111123578999865 3589999999999988764
No 67
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.94 E-value=1.9e-26 Score=237.08 Aligned_cols=332 Identities=14% Similarity=0.090 Sum_probs=222.4
Q ss_pred cceeEec--CCCCCcHHHHHHHhhhhhccCCCCCC-CCC-CCCCchhHHHHHHHHHHH-HHHHcCCCCCCCceeeecCCh
Q 009673 103 KSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLP-GKR-YYGGNEYIDELETLCQKR-ALAAFNLDENKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~a--sen~~~~~V~eal~~~l~~~y~~G~p-~~r-~~~g~~~~d~lE~~a~~~-la~~~g~~~~~~~~~V~~~sG 177 (529)
+.+.|.. +..++++.|++++...+......++. ..+ .+...+...++ +++ +++++|.+ +|.+++|
T Consensus 8 ~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~la~~~~~~------~v~~~~g 77 (371)
T 2e7j_A 8 DFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDF----IHNQLPKFLGCD------VARVTNG 77 (371)
T ss_dssp CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHH----HHTHHHHHTTSS------EEEEESS
T ss_pred CcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHH----HHHHHHHHcCCC------EEEEeCC
Confidence 4456654 34568999999998877543211111 001 11122333444 477 88999987 2334555
Q ss_pred -HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcc--cCCCCCCCCHHHHHHHhhh----c
Q 009673 178 -SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR--LDESTGLVDYDMLEKTAIL----F 250 (529)
Q Consensus 178 -s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~--v~~~~~~iD~d~le~~i~~----~ 250 (529)
++|+..++.++++|||+|+++++.|.++.. .+...|. +++.++ ++ +++.+|+++|++.++. .
T Consensus 78 ~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~ 146 (371)
T 2e7j_A 78 AREAKFAVMHSLAKKDAWVVMDENCHYSSYV--------AAERAGL--NIALVPKTDY-PDYAITPENFAQTIEETKKRG 146 (371)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETTCCHHHHH--------HHHHTTC--EEEEECCCCT-TTCCCCHHHHHHHHHHHTTTS
T ss_pred hHHHHHHHHHHHhCCCCEEEEccCcchHHHH--------HHHHcCC--eEEEeecccC-CCCCcCHHHHHHHHHhhcccC
Confidence 699999999999999999999998765432 2334554 666666 65 3578999999999983 2
Q ss_pred CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccccCC-CCeEEE
Q 009673 251 RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGP-RGGMIF 325 (529)
Q Consensus 251 ~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gp-rgG~i~ 325 (529)
++++|++++++||+ ..|+++|.++|+++|+++|+|++|..|.... .+. +.|++++|+||++.++ ++|+++
T Consensus 147 ~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~-----~~~~~~~di~~~s~sK~~~~~~~~G~~~ 221 (371)
T 2e7j_A 147 EVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPV-----SLKEIGADFIVGSGHKSMAASGPIGVMG 221 (371)
T ss_dssp CEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCC-----CHHHHTCSEEEEEHHHHSSCCSSCEEEE
T ss_pred CeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCC-----ChhhcCCCEEEecCCcCCCCCCCcEEEE
Confidence 78999998888776 7799999999999999999999987764321 111 4789999999998665 559999
Q ss_pred eeCCCcchhHHHhh-hcccccCCC------CCCChHHHHHHHHHHHHHhcCchHHHHHHHH--HHHHHHHHHHHHhcCcE
Q 009673 326 FKKDPVLGVELESA-INNAVFPGL------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV--VSNCRALASRLVELGYK 396 (529)
Q Consensus 326 ~~~~~~~~~~l~~~-i~~~~~p~~------~g~p~~~~iaala~al~~~~~~~~~~~~~~i--~~~a~~l~~~L~~~G~~ 396 (529)
+++ ++.+. +......+. .++++...++++..+++.+.. ++.+++ .++++++.+.|++.|++
T Consensus 222 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~ 291 (371)
T 2e7j_A 222 MKE------EWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKLGIK 291 (371)
T ss_dssp ECT------TTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHTTCE
T ss_pred Eec------hhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCcE
Confidence 988 45555 544322111 345566667666666765431 456667 78899999999888888
Q ss_pred EecCCC-CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCCCeEE-EccCCCccCCCCHHHHHHHHHHH
Q 009673 397 LVSGGS-DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIR-IGSPAMTTRGFSEKEFVAIADFI 473 (529)
Q Consensus 397 v~~~gt-~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~~~iR-ig~~~~tt~g~~~~d~~~la~~i 473 (529)
+..+.. ..+++++++. +..++.+.|.++||.+.. ..++.. ....++.+| |++... ..+++|++++++.|
T Consensus 292 ~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~---~~~~~~i~~~~~~l 363 (371)
T 2e7j_A 292 QLGDNPHNHDLMFFHAE----VLYEISKKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTY---GLSDEEVDYVLNAF 363 (371)
T ss_dssp EESSSSCCSSEEEEECH----HHHHHHHHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECT---TCCHHHHHHHHHHH
T ss_pred EecCCCccCceEEEECC----CHHHHHHHHHHCCEEEEe-ccccccccCCCCCceEEEEeecc---CCCHHHHHHHHHHH
Confidence 875421 2456777664 566788888899999854 111000 011257899 987643 03589999999999
Q ss_pred HHHHH
Q 009673 474 HEGVE 478 (529)
Q Consensus 474 ~~~~~ 478 (529)
+++++
T Consensus 364 ~~~~~ 368 (371)
T 2e7j_A 364 KEIIE 368 (371)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98875
No 68
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.2e-25 Score=235.10 Aligned_cols=356 Identities=13% Similarity=0.097 Sum_probs=232.9
Q ss_pred CChHHHHHHHHHHH--------HhhcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHH
Q 009673 86 ADPEVCEIITKEKE--------RQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (529)
Q Consensus 86 ~d~~~~~~~~~e~~--------~~~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~ 155 (529)
..+..+..+.+... ...+.|+|..+++ .+++.+.+++...+.+....+|+. .....++++.+.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~------~~g~~~lr~~ia~ 106 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSP------TRGRPSLINSLIK 106 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCC------TTCCHHHHHHHHH
T ss_pred cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCC------CCCCHHHHHHHHH
Confidence 55566666654432 2235788877764 357899999988775311122322 1112456656667
Q ss_pred HHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC
Q 009673 156 RALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES 234 (529)
Q Consensus 156 ~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~ 234 (529)
++.+.+|.+.+. .+|.+++|+ +|+..++.++++|||+|++++|.|.++.. .+...|. +++.++++++
T Consensus 107 ~l~~~~g~~~~~--~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~ 174 (447)
T 3b46_A 107 LYSPIYNTELKA--ENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIP--------NIELCGG--KVVYVPINPP 174 (447)
T ss_dssp HHTTTTTSCCCG--GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEEEECC
T ss_pred HHHHhcCCCCCh--hhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEEeCCCc
Confidence 777777765321 145567775 99999999999999999999998765421 2344555 5556666543
Q ss_pred -----------CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccccc
Q 009673 235 -----------TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (529)
Q Consensus 235 -----------~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~ 298 (529)
++.+|+++|++.+++ ++++|++++++||+ .. ++++|+++|++||++||+|++|. ++.+.+..
T Consensus 175 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~~~~g~~ 252 (447)
T 3b46_A 175 KELDQRNTRGEEWTIDFEQFEKAITS-KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYE-HLYFTDSF 252 (447)
T ss_dssp GGGGTSCBCSTTSEECHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT-TCBCSSCC
T ss_pred cccccccccccCcccCHHHHHHhhcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccch-hcccCCCC
Confidence 467999999999976 89999999888886 32 68999999999999999999965 33433311
Q ss_pred CC--CC----CcccEEEecccccc--cCCCCeEEEe-eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-
Q 009673 299 AD--PF----KYCDVVTTTTHKSL--RGPRGGMIFF-KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ- 368 (529)
Q Consensus 299 ~~--~~----~~aDiv~~S~hK~l--~GprgG~i~~-~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~- 368 (529)
.. .+ .+.+++++|+||++ +|+|.||+++ ++ ++.+.+.........+.+.. ..+++..+|+...
T Consensus 253 ~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~------~l~~~l~~~~~~~~~~~~~~-~~~a~~~aL~~~~~ 325 (447)
T 3b46_A 253 TRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNA------ELLSYAAKAHTRICFASPSP-LQEACANSINDALK 325 (447)
T ss_dssp CCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCH------HHHHHHHHHHHHHTSSCCHH-HHHHHHHHHHHHHH
T ss_pred cCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCH------HHHHHHHHHHhhccCCCChH-HHHHHHHHHhCCcc
Confidence 11 12 14679999999997 5889999999 66 66666543211111223333 3444455676542
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC--------------CCcHHHHHHhH-hcCCeEEc
Q 009673 369 SPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM--------------GIDGARVEKIL-DMASITLN 433 (529)
Q Consensus 369 ~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~--------------~i~~~~~~~~L-~~~GI~v~ 433 (529)
...+++..+++.++++.+.+.|++.|+.+..+. .++++|+++... +.+..++.+.| +++||.+.
T Consensus 326 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~ 404 (447)
T 3b46_A 326 IGYFEKMRQEYINKFKIFTSIFDELGLPYTAPE-GTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAI 404 (447)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHTCCEECCS-BSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECB
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCC-eeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEE
Confidence 123577888899999999999998888876542 356677777532 13445566555 57999985
Q ss_pred CCCCCCCCC--CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 434 KNSVPGDKS--ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 434 ~~~~Pg~~~--~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
++...+... +..+++|||++. .+++++++.++.|.+
T Consensus 405 pg~~f~~~~~~~~~~~~iRls~~------~~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 405 PPTEFYIKEHEKAAENLLRFAVC------KDDAYLENAVERLKL 442 (447)
T ss_dssp CGGGGSCGGGGGGGTTEEEEECC------SCHHHHHHHHHHGGG
T ss_pred CchHhCCCCccCCCCCEEEEEEe------CCHHHHHHHHHHHHH
Confidence 432111000 112578999975 257888888887754
No 69
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.94 E-value=2.5e-25 Score=232.88 Aligned_cols=361 Identities=13% Similarity=0.079 Sum_probs=234.7
Q ss_pred hcccCChHHHHHHHHHHHHhhcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 009673 82 SLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALA 159 (529)
Q Consensus 82 ~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~ 159 (529)
++....+..+..+.+. ....+.|+|..+++. .++.+.+++...+.+. ..+|+. .....++++.+.+++.+
T Consensus 6 ~~~~~~~~~~~~~~~~-~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~------~~g~~~l~~~la~~~~~ 77 (411)
T 2o0r_A 6 RLRPYATTVFAEMSAL-ATRIGAVNLGQGFPDEDGPPKMLQAAQDAIAGG-VNQYPP------GPGSAPLRRAIAAQRRR 77 (411)
T ss_dssp GGGGGSSCHHHHHHHH-HHTTTCEESSCSSCSSCCCHHHHHHHHHHHHTT-CCSCCC------TTCCHHHHHHHHHHHHH
T ss_pred HhHhcCccHHHHHHHH-hhcCCeeeccCcCCCCCCCHHHHHHHHHHHhcC-CCCCCC------CCCCHHHHHHHHHHHHH
Confidence 3444555555544432 223456888777653 5789999998887542 123332 11234667667788888
Q ss_pred HcCCCCCCCce-eeecCCh-HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC--C
Q 009673 160 AFNLDENKWGV-NVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--T 235 (529)
Q Consensus 160 ~~g~~~~~~~~-~V~~~sG-s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~--~ 235 (529)
.+|.+.+. . +|.+++| ++|+..++.++++|||+|++++|.|.++.. .+...|. +++.++++++ +
T Consensus 78 ~~g~~~~~--~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~ 145 (411)
T 2o0r_A 78 HFGVDYDP--ETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSP--------VVAMAGA--HRVTVPLVPDGRG 145 (411)
T ss_dssp HHCCCCCT--TTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECEEETTE
T ss_pred HcCCCCCC--CceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH--------HHHHcCC--EEEEeeccccccC
Confidence 88864221 1 3444665 499999999999999999999998865421 2334554 5566666533 4
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC------Cc
Q 009673 236 GLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF------KY 304 (529)
Q Consensus 236 ~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~------~~ 304 (529)
+.+|+++|++.+++ ++++|+++.++||+ ..+ +++|.++|+++|++||+|++|..+. ..+..+.++ .+
T Consensus 146 ~~~d~~~l~~~l~~-~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~g~~~~~~~~~~~~~~ 223 (411)
T 2o0r_A 146 FALDADALRRAVTP-RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLV-FDHARHLPLAGFDGMAE 223 (411)
T ss_dssp EECCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCB-CTTCCCCCGGGSTTTGG
T ss_pred CCCCHHHHHHhhcc-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc-cCCCCCcChhhccCCCC
Confidence 67999999999986 88999988888876 444 6899999999999999999976433 222111111 24
Q ss_pred ccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673 305 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (529)
Q Consensus 305 aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~ 382 (529)
.|++++|+||++ +|+|.|++++++ ++.+.+.........+.+. ...+++..+|+.. ...+++..+++.++
T Consensus 224 ~~i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~~~~~-~~~~a~~~~l~~~-~~~~~~~~~~~~~~ 295 (411)
T 2o0r_A 224 RTITISSAAKMFNCTGWKIGWACGPA------ELIAGVRAAKQYLSYVGGA-PFQPAVALALDTE-DAWVAALRNSLRAR 295 (411)
T ss_dssp GEEEEEEHHHHTTCTTTCEEEEECCH------HHHHHHHHHHHHHTSCCCT-THHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred CEEEEeechhhcCCccceEEEEeeCH------HHHHHHHHHHhhccCCCCh-HHHHHHHHHHhCC-hHHHHHHHHHHHHH
Confidence 689999999987 567789999976 6666554322111111222 2334444566543 23457778888999
Q ss_pred HHHHHHHHHhcCcEEecCCCCCceEEEccCCC-CCcHHHHHHhH-hcCCeEEcCCCCC-CCC-------CCCCCCeEEEc
Q 009673 383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPM-GIDGARVEKIL-DMASITLNKNSVP-GDK-------SALVPGGIRIG 452 (529)
Q Consensus 383 a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~-~i~~~~~~~~L-~~~GI~v~~~~~P-g~~-------~~~~~~~iRig 452 (529)
++.+.+.|++.|+.+..+. .+.++++++... +.+..++.+.| +++||.+..+... +.. ....++.+||+
T Consensus 296 ~~~l~~~L~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis 374 (411)
T 2o0r_A 296 RDRLAAGLTEIGFAVHDSY-GTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFT 374 (411)
T ss_dssp HHHHHHHHHHHTCEECCCC-BSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEE
T ss_pred HHHHHHHHHHcCCEecCCC-eeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEE
Confidence 9999999988888876542 345667777532 14566666655 5789998543211 100 00124679999
Q ss_pred cCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 453 SPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 453 ~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
+. .+++|++++++.|.+++..
T Consensus 375 ~~------~~~e~i~~~~~~l~~~~~~ 395 (411)
T 2o0r_A 375 FC------KRDDTLDEAIRRLSVLAER 395 (411)
T ss_dssp CC------SCHHHHHHHHHHHGGGGC-
T ss_pred ec------CCHHHHHHHHHHHHHHHhc
Confidence 63 2579999999999876543
No 70
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.94 E-value=1.9e-25 Score=233.15 Aligned_cols=341 Identities=11% Similarity=0.002 Sum_probs=226.6
Q ss_pred hcceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673 102 FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (529)
Q Consensus 102 ~~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs- 178 (529)
.+.|+|..+++ ++++.|++++...+.+....+|+.. ....++++...+++.+.+|.+.+.- .+|.+++|+
T Consensus 23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~------~g~~~l~~~la~~~~~~~~~~~~~~-~~i~~~~g~~ 95 (410)
T 3e2y_A 23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRG------FGHPALVKALSCLYGKIYQRQIDPN-EEILVAVGAY 95 (410)
T ss_dssp TTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCT------TCCHHHHHHHHHHHHHHHTSCCCTT-TSEEEESHHH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCC------CChHHHHHHHHHHHHHHhCCCCCCC-CCEEEeCCcH
Confidence 35688887765 3689999999888754322344331 1124566666677887787653210 135556665
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC----------CCCCCCHHHHHHHhh
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE----------STGLVDYDMLEKTAI 248 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~----------~~~~iD~d~le~~i~ 248 (529)
+|+..++.++++|||+|++++|.|.++.. .+...|. +++.+++++ +++.+|++++++.++
T Consensus 96 ~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~ 165 (410)
T 3e2y_A 96 GSLFNSIQGLVDPGDEVIIMVPFYDCYEP--------MVRMAGA--VPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFS 165 (410)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECEECCCCSSCCBGGGEECCHHHHHTTCC
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEEeccccccccccccccCCcCCHHHHHhhcC
Confidence 99999999999999999999988765421 2334454 455555432 245689999999997
Q ss_pred hcCCcEEEEcCCCCCC--C---CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC------cccEEEecccccc-
Q 009673 249 LFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK------YCDVVTTTTHKSL- 316 (529)
Q Consensus 249 ~~~pklIi~~~s~~p~--~---~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~------~aDiv~~S~hK~l- 316 (529)
+ ++++|++++++||+ . .++++|+++|++||+++|+|++|. ++...+....++. ..++++.|+||++
T Consensus 166 ~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g 243 (410)
T 3e2y_A 166 S-KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYE-WLVYTGHTHVKIATLPGMWERTITIGSAGKTFS 243 (410)
T ss_dssp T-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSS
T ss_pred C-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhh-hcccCCCCCCCHHHcCCccCeEEEEecchhhcC
Confidence 7 89999998888886 3 379999999999999999999965 4333332121111 2348889999987
Q ss_pred -cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHH------hcCchHHHHHHHHHHHHHHHHHH
Q 009673 317 -RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH------AQSPEFKVYQNKVVSNCRALASR 389 (529)
Q Consensus 317 -~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~------~~~~~~~~~~~~i~~~a~~l~~~ 389 (529)
+|+|.|++++++ ++.+.+.........+. +....+++..+++. .....+++..+++.++++.+.+.
T Consensus 244 ~~G~r~G~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 316 (410)
T 3e2y_A 244 VTGWKLGWSIGPA------HLIKHLQTVQQNSFYTC-ATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRL 316 (410)
T ss_dssp CGGGCCEEEECCH------HHHHHHHHHHHTTTCCC-CHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEECH------HHHHHHHHHHHhhccCC-ChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 578889999987 66666654332222233 33344444445653 11334578888899999999999
Q ss_pred HHhcCcEEecCCCCCceEEEccCC--CCCcH---------HHHHHhHhcCCeEEcCCCCCCCCC--CCCCCeEEEccCCC
Q 009673 390 LVELGYKLVSGGSDNHLVLVDLRP--MGIDG---------ARVEKILDMASITLNKNSVPGDKS--ALVPGGIRIGSPAM 456 (529)
Q Consensus 390 L~~~G~~v~~~gt~~~~~~v~~~~--~~i~~---------~~~~~~L~~~GI~v~~~~~Pg~~~--~~~~~~iRig~~~~ 456 (529)
|++.|+.+..+. .++++|+++.. .+++. +.+..+|+++||.+..+...+... +...+.|||++.
T Consensus 317 L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~-- 393 (410)
T 3e2y_A 317 LNSVGLKPIVPD-GGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFI-- 393 (410)
T ss_dssp HHTTTCEEEBCS-BSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECC--
T ss_pred HHHCCCeecCCC-ccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEc--
Confidence 999899876553 35667776643 12221 334556788999986543211100 113578999954
Q ss_pred ccCCCCHHHHHHHHHHHHH
Q 009673 457 TTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 457 tt~g~~~~d~~~la~~i~~ 475 (529)
.+++++++.++.|++
T Consensus 394 ----~~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 394 ----KKDSTLDAAEEIFRA 408 (410)
T ss_dssp ----CCHHHHHHHHHHHHT
T ss_pred ----CCHHHHHHHHHHHHh
Confidence 368999999998864
No 71
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.94 E-value=2e-25 Score=230.12 Aligned_cols=334 Identities=15% Similarity=0.127 Sum_probs=225.8
Q ss_pred hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-H
Q 009673 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (529)
Q Consensus 102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s 178 (529)
++.|+|..+++. +++.|++++...+.+.. .+|+. . + .++++...+++.+.+|.+.+. .+|.+++| +
T Consensus 23 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~-~---~----~~lr~~la~~~~~~~~~~~~~--~~i~~t~g~~ 91 (377)
T 3fdb_A 23 QGVLPLWVAESDFSTCPAVLQAITDAVQREA-FGYQP-D---G----SLLSQATAEFYADRYGYQARP--EWIFPIPDVV 91 (377)
T ss_dssp TTSEECCSSCCCSCCCHHHHHHHHHHHHTTC-CSSCC-S---S----CCHHHHHHHHHHHHHCCCCCG--GGEEEESCHH
T ss_pred CCeeeecccCCCCCCCHHHHHHHHHHHHcCC-CCCCC-C---C----HHHHHHHHHHHHHHhCCCCCH--HHEEEeCChH
Confidence 467888887763 58999999988876422 23433 1 1 245555557777777754321 13444555 5
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
+|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++++ +|+++|++.+++ ++++|+++
T Consensus 92 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~---~d~~~l~~~l~~-~~~~v~i~ 157 (377)
T 3fdb_A 92 RGLYIAIDHFTPAQSKVIVPTPAYPPFFH--------LLSATQR--EGIFIDATGG---INLHDVEKGFQA-GARSILLC 157 (377)
T ss_dssp HHHHHHHHHHSCTTCCEEEEESCCTHHHH--------HHHHHTC--CEEEEECTTS---CCHHHHHHHHHT-TCCEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCC--EEEEccCCCC---CCHHHHHHHhcc-CCCEEEEe
Confidence 99999999999999999999988765431 2333454 5666666643 999999999988 79999999
Q ss_pred CCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccc-ccCCCCC-----cccEEEecccccc--cCCCCeEEE
Q 009673 259 ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS-VVADPFK-----YCDVVTTTTHKSL--RGPRGGMIF 325 (529)
Q Consensus 259 ~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~-~~~~~~~-----~aDiv~~S~hK~l--~GprgG~i~ 325 (529)
.++||+ .. ++++|.++|++||+++|+|++|.. +...+ ....++. ..++++.|+||++ +|.|.|+++
T Consensus 158 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~ 236 (377)
T 3fdb_A 158 NPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAP-LVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQII 236 (377)
T ss_dssp SSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGG-GBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccch-hhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEE
Confidence 888886 44 477788889999999999999654 33333 1122221 2348899999997 678889887
Q ss_pred eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEecCCCC
Q 009673 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSGGSD 403 (529)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~~gt~ 403 (529)
..++ ++.+.+...... ...+++....+++..+++.. ...+++..+++.++++.+.+.|++. |+.+..+. .
T Consensus 237 ~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~ 308 (377)
T 3fdb_A 237 FSNP-----SDAEHWQQLSPV-IKDGASTLGLIAAEAAYRYG-TDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQ-A 308 (377)
T ss_dssp CCSH-----HHHHHHHHSCHH-HHCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCS-B
T ss_pred eCCH-----HHHHHHHHHHHh-hcCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCC-e
Confidence 7442 676666543211 12234444555555566643 2335778888999999999999884 88887542 3
Q ss_pred CceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 404 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 404 ~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+++.|+++...+.+.+.+..+++++||.+..+...+ ...++.+||++. .+++++++.++.|.+++.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~~Ris~~------~~~e~i~~~l~~l~~~l~ 374 (377)
T 3fdb_A 309 TYLMWIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFG---EDGTGFCRLNFA------TSREVLEEAIDRMAKAVS 374 (377)
T ss_dssp CSEEEEECTTSCCCSCHHHHHHHHHCEECEEGGGGC---GGGTTEEEEECC------SCHHHHHHHHHHHHHHHT
T ss_pred eEEEEEECcccCCCHHHHHHHHHhCCEEecCChhcc---CCCCCEEEEEeC------CCHHHHHHHHHHHHHHHh
Confidence 455577876544454445666677799996432211 113578999965 258999999999988764
No 72
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.94 E-value=2.6e-26 Score=238.77 Aligned_cols=342 Identities=15% Similarity=0.143 Sum_probs=215.7
Q ss_pred cceeEecCC-CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC-hHHH
Q 009673 103 KSLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPA 180 (529)
Q Consensus 103 ~~i~L~ase-n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s-Gs~A 180 (529)
+.+.|..+. .++++.|++++...+.+.+ +.+...+..+. ...++.+.+++++++++|++++ +|.+++ |++|
T Consensus 20 ~~iyld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~l~~~la~~~~~~~~----~v~~~~g~t~a 92 (400)
T 3vax_A 20 HMTYLDAAATTRVDQRVADIVLHWMTAEF--GNAGSRHEYGI-RAKRGVERAREYLASTVSAEPD----ELIFTSGATES 92 (400)
T ss_dssp --CCCCCCCCSSSCHHHHHHHHHHHHHHH--SCSSCHHHHHH-HHHHHHHHHHHHHHHHTTCCGG----GEEEESCHHHH
T ss_pred CcEEecCCCCCCCCHHHHHHHHHHHHhcc--CCCcccchhHH-HHHHHHHHHHHHHHHHcCCCCC----cEEEeCCHHHH
Confidence 445555433 4689999999998876544 23332222221 2233344567899999999864 233455 4599
Q ss_pred HHHHHHhhc----CCCC-EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673 181 NFEVYTAIL----KPHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (529)
Q Consensus 181 ~~~~l~all----~pGD-~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI 255 (529)
+..++.+++ +||| +|++++++|++...... .+...|. +++.++++ +++.+|+++|++.+++ ++++|
T Consensus 93 l~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~-----~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~v 163 (400)
T 3vax_A 93 NNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLE-----HLAGRGF--EVDFLTPG-PSGRISVEGVMERLRP-DTLLV 163 (400)
T ss_dssp HHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHH-----HHHTTTC--EEEEECCC-TTCCCCHHHHHTTCCT-TEEEE
T ss_pred HHHHHHHHHHhhccCCCCEEEECccccHhHHHHHH-----HHHhcCC--eEEEEccC-CCCCcCHHHHHHhcCC-CceEE
Confidence 999999998 8999 99999988765432111 1112344 67777776 4688999999999987 89999
Q ss_pred EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEE-eeCCCc
Q 009673 256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIF-FKKDPV 331 (529)
Q Consensus 256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~-~~~~~~ 331 (529)
+++.++||+ ..|+++|.++|+++|++||+|++|..|....+... . +|++++|+||+ .|+.| |+++ ++++
T Consensus 164 ~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~--~--~d~~~~s~~K~-~g~~g~g~~~~~~~~-- 236 (400)
T 3vax_A 164 SLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTT--P--IDMISISGHKI-GAPKGVGALVTRRRE-- 236 (400)
T ss_dssp ECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGS--C--CSEEEEETGGG-TSCSSCEEEEECBCS--
T ss_pred EEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhh--c--CcEEEEeHHHh-CCCCceEEEEEecch--
Confidence 999888876 78999999999999999999999887654332111 1 78999999995 56765 8888 8762
Q ss_pred chhHHH---hhhccccc------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC
Q 009673 332 LGVELE---SAINNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 402 (529)
Q Consensus 332 ~~~~l~---~~i~~~~~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt 402 (529)
++. ..+..... ....++++...++++..+++... .++++..+++.++++++.+.|+..|+.+..+..
T Consensus 237 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 312 (400)
T 3vax_A 237 ---EMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFE-AEHAQWQVAAQDLRSRLLAGLASTSFQVNGDQD 312 (400)
T ss_dssp ---SSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHH-HSHHHHHHHHHHHHHHHHHHHTTTTCEECSCTT
T ss_pred ---hccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHhhCCCCEEEeCCcc
Confidence 111 11221111 11245667777777777777553 356788889999999999999856888775422
Q ss_pred --CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCC----------CCCCC----CCeEEEcc-CCCccCCCCHHH
Q 009673 403 --DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD----------KSALV----PGGIRIGS-PAMTTRGFSEKE 465 (529)
Q Consensus 403 --~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~----------~~~~~----~~~iRig~-~~~tt~g~~~~d 465 (529)
..+++++.+. +.+..++.+.|. +||.++.+...+. ..... ++.|||++ +..+ +++|
T Consensus 313 ~~~~~~~~~~~~--~~~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~----t~e~ 385 (400)
T 3vax_A 313 HVVPHILNLSFE--DVDAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQA----TDLD 385 (400)
T ss_dssp SBCTTEEEEECT--TCCHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC----------
T ss_pred cCCCCEEEEEeC--CCCHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCC----CHHH
Confidence 1234444443 457788888888 9998854321000 00011 37899997 5443 4799
Q ss_pred HHHHHHHHHHHHH
Q 009673 466 FVAIADFIHEGVE 478 (529)
Q Consensus 466 ~~~la~~i~~~~~ 478 (529)
++++++.|+++++
T Consensus 386 i~~~~~~l~~~~~ 398 (400)
T 3vax_A 386 VEELARGVAKLKP 398 (400)
T ss_dssp -------------
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988764
No 73
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2e-25 Score=239.78 Aligned_cols=328 Identities=14% Similarity=0.117 Sum_probs=228.2
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhhcC---
Q 009673 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILK--- 190 (529)
Q Consensus 115 ~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~sGs~A~~~~l~all~--- 190 (529)
++.+.+++...+.. +....+. .+...+...++|+.+++++++++|++ ... ..+.+++|++|+..++.++++
T Consensus 77 ~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~l~~~~~~~la~~~g~~~~~~--~~~~~~ggt~a~~~a~~a~~~~~~ 151 (497)
T 3mc6_A 77 GDDLIHLQTIAYEK-YCVANQL--HPDVFPAVRKMESEVVSMVLRMFNAPSDTG--CGTTTSGGTESLLLACLSAKMYAL 151 (497)
T ss_dssp CHHHHHHHHHHHHH-TSSCBTT--CTTTCHHHHHHHHHHHHHHHHHTTCCTTTC--CEEEESSHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHH-HhhcCCC--CcccChHHHHHHHHHHHHHHHHhCCCCCCC--eEEEcCcHHHHHHHHHHHHHHHHH
Confidence 46777777665543 2111111 12333456788888889999999998 221 134456667999999998865
Q ss_pred --CC---CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-
Q 009673 191 --PH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR- 264 (529)
Q Consensus 191 --pG---D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~- 264 (529)
+| |+|+++.+.|.++. +.+...|. +++.++++++++.+|+++|++++++ +|++|+++.++|++
T Consensus 152 ~~~g~~~~~Vi~~~~~h~~~~--------~~~~~~G~--~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG 220 (497)
T 3mc6_A 152 HHRGITEPEIIAPVTAHAGFD--------KAAYYFGM--KLRHVELDPTTYQVDLGKVKKFINK-NTVLLVGSAPNFPHG 220 (497)
T ss_dssp HHSCCSSCEEEEETTSCHHHH--------HHHHHSCC--EEEEECBCTTTCSBCTTTTGGGCCS-SEEEEEEETTCTTTC
T ss_pred hcCCCCCceEEEeCCccHHHH--------HHHHHcCC--eEEEEecCcccCcCCHHHHHHHHhh-CCEEEEEECCCCCCC
Confidence 56 99999988765432 23445565 6667777644689999999999987 79999999888765
Q ss_pred -CCCHHHHHHHHHHhCCEEEEeccccccccc----ccccCC-CC----CcccEEEecccccccCCCC-eEEEeeCCCcch
Q 009673 265 -DFDYPRMRQIADAVGALLMMDMAHISGLVA----ASVVAD-PF----KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG 333 (529)
Q Consensus 265 -~~d~~~i~~ia~~~g~~livD~ah~~Gli~----~~~~~~-~~----~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~ 333 (529)
..|+++|+++|++||++|++|++|..+... .+.... ++ .++|++++|+||++.||.+ |++++++
T Consensus 221 ~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~----- 295 (497)
T 3mc6_A 221 IADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRN----- 295 (497)
T ss_dssp CCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSS-----
T ss_pred cCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecC-----
Confidence 789999999999999999999998754432 111111 12 2689999999999755554 9999987
Q ss_pred hHHHhhhcccccC----------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEecCC
Q 009673 334 VELESAINNAVFP----------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSGG 401 (529)
Q Consensus 334 ~~l~~~i~~~~~p----------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~~g 401 (529)
+..........+ ...|+.....+++++++++.+...+++++.+++.++++++.+.|++. |++++.+.
T Consensus 296 -~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~ 374 (497)
T 3mc6_A 296 -SDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNP 374 (497)
T ss_dssp -HHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCC
T ss_pred -HHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 333322211111 12334444456677777776666677889999999999999999984 89987542
Q ss_pred CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 402 SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 402 t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
. ..++.+. ..+++..++.+.|.+.||.++... .+.++|+++.. .+++|++++++.|++++...
T Consensus 375 ~-~~~v~~~--~~~~~~~~l~~~L~~~Gi~v~~~~--------~~~~~ri~~~~-----~t~e~i~~~~~~L~~~l~~~ 437 (497)
T 3mc6_A 375 R-YSVISFS--SKTLNIHELSDRLSKKGWHFNALQ--------KPVALHMAFTR-----LSAHVVDEICDILRTTVQEL 437 (497)
T ss_dssp C-SSEEEEE--CTTTTHHHHHHHHHTTTCBCEECC--------SSCCEEEECCT-----TTTCTHHHHHHHHHHHHHHH
T ss_pred C-eeEEEEe--CCCCCHHHHHHHHHhCCEEEecCC--------CCCeEEEEEeC-----CCHHHHHHHHHHHHHHHHHH
Confidence 2 2334443 335678889999999999875432 23478998762 35799999999999988754
No 74
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.94 E-value=5.4e-26 Score=236.23 Aligned_cols=332 Identities=17% Similarity=0.130 Sum_probs=219.0
Q ss_pred cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (529)
Q Consensus 103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~ 182 (529)
+.+++..+++.+++.+++++...+...+ | ....+...+++ +.+++++|.+. .+.+++|++|+.
T Consensus 23 ~~~~l~~~~p~~~~~~~~a~~~~~~~~~---~-----~~~~~~~~~l~----~~la~~~~~~~-----~i~~~~gt~al~ 85 (391)
T 3dr4_A 23 DLPRISVAAPRLDGNERDYVLECMDTTW---I-----SSVGRFIVEFE----KAFADYCGVKH-----AIACNNGTTALH 85 (391)
T ss_dssp -----CCCCCCCCSSHHHHHHHHHHHTC---C-----SSCSHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHH
T ss_pred CCceeccCCCCCCHHHHHHHHHHHHcCC---c-----cCCChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHH
Confidence 4566666777788999999988776432 1 11234455555 67888899873 366789999999
Q ss_pred HHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673 183 EVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (529)
Q Consensus 183 ~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (529)
.++.++ ++|||+|+++++.|.++.. .+...|. +++.++++++++.+|+++|++.+++ ++++|+++++
T Consensus 86 ~~l~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~n~- 153 (391)
T 3dr4_A 86 LALVAMGIGPGDEVIVPSLTYIASAN--------SVTYCGA--TPVLVDNDPRTFNLDAAKLEALITP-RTKAIMPVHL- 153 (391)
T ss_dssp HHHHHHTCCTTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCSBCGGGSGGGCCT-TEEEECCBCG-
T ss_pred HHHHHcCCCCcCEEEECCCchHHHHH--------HHHHCCC--EEEEEecCccccCcCHHHHHHhcCC-CceEEEEECC-
Confidence 999999 9999999999998866531 2334454 7777888767789999999999987 7888875432
Q ss_pred CCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEec--ccccccCCCCeEEEeeCCCcchhHHHhh
Q 009673 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTT--THKSLRGPRGGMIFFKKDPVLGVELESA 339 (529)
Q Consensus 262 ~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S--~hK~l~GprgG~i~~~~~~~~~~~l~~~ 339 (529)
.+...|+++|.++|+++|++||+|++|..|....+..... ..|++++| .||+++|++||+++++++ ++.+.
T Consensus 154 tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~--~~di~~~S~s~~K~l~~g~gg~~~~~~~-----~~~~~ 226 (391)
T 3dr4_A 154 YGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGS--LGDCATFSFFGNAIITTGEGGMITTNDD-----DLAAK 226 (391)
T ss_dssp GGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS--SSSEEEEECBTTSSSCCBSCEEEEESCH-----HHHHH
T ss_pred CCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecc--cCCEEEEECCCCCcCCcCCeEEEEECCH-----HHHHH
Confidence 2337899999999999999999999998877654432222 23666665 669998888999988773 45544
Q ss_pred hcccccCCC----------CCC-ChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecC--C----C
Q 009673 340 INNAVFPGL----------QGG-PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG--G----S 402 (529)
Q Consensus 340 i~~~~~p~~----------~g~-p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~--g----t 402 (529)
+......+. .|. .....++ +++.......++++.++..++++++.+.|.+.|+.+... . .
T Consensus 227 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~---aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 303 (391)
T 3dr4_A 227 MRLLRGQGMDPNRRYWFPIVGFNYRMTNIQ---AAIGLAQLERVDEHLAARERVVGWYEQKLARLGNRVTKPHVALTGRH 303 (391)
T ss_dssp HHHHHBTTCCTTSTTCCSSCCCBCBCCHHH---HHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGGTTSEECCCCCTTSCC
T ss_pred HHHHHhcCCCCCCcccccccccccCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccCcCCCCCCcc
Confidence 432211110 010 0111121 122211123456778888888999999998878776543 1 1
Q ss_pred CCceEEEccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCC-CCC--------------CCCeEEEccCCCccCCCCHHHH
Q 009673 403 DNHLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDK-SAL--------------VPGGIRIGSPAMTTRGFSEKEF 466 (529)
Q Consensus 403 ~~~~~~v~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~--------------~~~~iRig~~~~tt~g~~~~d~ 466 (529)
..+++++.+.. .+++.+++.+.|.+.||.+.....|.+. +.+ ....|||++... ++++|+
T Consensus 304 ~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~----~t~edi 379 (391)
T 3dr4_A 304 VFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAG----LTEADI 379 (391)
T ss_dssp CCSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTT----CCHHHH
T ss_pred eeEEEEEEECCccchhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCC----CCHHHH
Confidence 12234444432 2567788999999999998765433221 111 124689987643 569999
Q ss_pred HHHHHHHHHHH
Q 009673 467 VAIADFIHEGV 477 (529)
Q Consensus 467 ~~la~~i~~~~ 477 (529)
+++++.|++++
T Consensus 380 ~~~~~~l~~~l 390 (391)
T 3dr4_A 380 DRVIAALDQVL 390 (391)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHHh
Confidence 99999997653
No 75
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.94 E-value=7.9e-25 Score=230.61 Aligned_cols=338 Identities=15% Similarity=0.109 Sum_probs=223.9
Q ss_pred cceeEecCCC------CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC-----CCCCCCcee
Q 009673 103 KSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-----LDENKWGVN 171 (529)
Q Consensus 103 ~~i~L~asen------~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g-----~~~~~~~~~ 171 (529)
+.|+|..+.. ++++.|++++...+......+|+. .....+++ +.++++++ ++.++ .
T Consensus 55 ~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr----~~la~~~~~~~~~~~~~~---v 121 (427)
T 3dyd_A 55 TMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAP------SIGFLSSR----EEIASYYHCPEAPLEAKD---V 121 (427)
T ss_dssp CCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCC------TTCCHHHH----HHHHHHHCBTTBCCCGGG---E
T ss_pred CEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCC------CCCcHHHH----HHHHHHHhhcCCCCChHH---E
Confidence 4588876552 578999999998876543334432 11223444 55666776 44442 1
Q ss_pred eecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhc
Q 009673 172 VQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILF 250 (529)
Q Consensus 172 V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~ 250 (529)
+...+|++|+..++.++++|||+|++++|.|.++.. .+...|. +++.+++++ +++.+|++++++.+++
T Consensus 122 ~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~- 190 (427)
T 3dyd_A 122 ILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKT--------LAESMGI--EVKLYNLLPEKSWEIDLKQLEYLIDE- 190 (427)
T ss_dssp EEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTC--EEEEEEEEGGGTTEECHHHHHSSCCT-
T ss_pred EEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEEecccccCCCCCHHHHHHHhcc-
Confidence 334455699999999999999999999998765431 2334454 555666643 3578999999999987
Q ss_pred CCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC--ccc---EEEecccccc--cC
Q 009673 251 RPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCD---VVTTTTHKSL--RG 318 (529)
Q Consensus 251 ~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aD---iv~~S~hK~l--~G 318 (529)
++++|++..++||+ ..+ +++|+++|+++|+++|+|++|. ++...+....++. ..| ++++|+||++ +|
T Consensus 191 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~-~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G 269 (427)
T 3dyd_A 191 KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYG-DMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPG 269 (427)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTT-TCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGG
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCch-hhccCCCcCccHHHhCCCCcEEEEeeccccCCCcC
Confidence 78999888888887 667 9999999999999999999954 4443332222221 122 6788999974 78
Q ss_pred CCCeEEEeeCCCcc-hhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcE
Q 009673 319 PRGGMIFFKKDPVL-GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK 396 (529)
Q Consensus 319 prgG~i~~~~~~~~-~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~ 396 (529)
+|.|+++++++... ..++.+.+...... ..+++....+++..+|+......+++..+++.++++.+.+.|++. |+.
T Consensus 270 ~riG~~~~~~~~~~~~~~i~~~l~~~~~~--~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 347 (427)
T 3dyd_A 270 WRLGWILIHDRRDIFGNEIRDGLVKLSQR--ILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLR 347 (427)
T ss_dssp GCCEEEEEECSTTSSHHHHHHHHHHHHHH--HCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEE
T ss_pred cceEEEEecCcchhhHHHHHHHHHHHHhc--cCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 88999999863110 01344444322111 123445555566666765333445788889999999999999985 888
Q ss_pred EecCCCCCceEEEccCC----CCCcHHHHHHh-HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHH
Q 009673 397 LVSGGSDNHLVLVDLRP----MGIDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 471 (529)
Q Consensus 397 v~~~gt~~~~~~v~~~~----~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~ 471 (529)
++.+. ...++++.+.. .+.+..++.+. ++++||.+..+..++ .++++||++. .++++++++++
T Consensus 348 ~~~p~-~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~-----~~~~iRis~~------~~~e~i~~~l~ 415 (427)
T 3dyd_A 348 PVRPS-GAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFE-----YPNFIRVVIT------VPEVMMLEACS 415 (427)
T ss_dssp EECCS-BTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGT-----CTTEEEEESC------SCHHHHHHHHH
T ss_pred ecCCC-eeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccC-----CCCeEEEEEC------CCHHHHHHHHH
Confidence 76542 34556665531 12455555544 478999985443221 3578999963 45899999999
Q ss_pred HHHHHHHH
Q 009673 472 FIHEGVEI 479 (529)
Q Consensus 472 ~i~~~~~~ 479 (529)
.|.++++.
T Consensus 416 ~l~~~l~~ 423 (427)
T 3dyd_A 416 RIQEFCEQ 423 (427)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
No 76
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.93 E-value=9.7e-25 Score=224.91 Aligned_cols=327 Identities=14% Similarity=0.047 Sum_probs=220.7
Q ss_pred hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-H
Q 009673 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (529)
Q Consensus 102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s 178 (529)
++.|+|..+++. .++.+.+++...+.... .+|+. .....++++...+++.+.+|.+.+. .+|.+++| +
T Consensus 29 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~------~~~~~~l~~~la~~~~~~~g~~~~~--~~v~~~~g~~ 99 (370)
T 2z61_A 29 KKVIHLEIGEPDFNTPKPIVDEGIKSLKEGK-THYTD------SRGILELREKISELYKDKYKADIIP--DNIIITGGSS 99 (370)
T ss_dssp CCCEECCCCSCSSCCCHHHHHHHHHHHHTTC-CSCCC------TTCCHHHHHHHHHHHHHHSSCCCCG--GGEEEESSHH
T ss_pred CCEEEccCCCCCCCCCHHHHHHHHHHHHcCc-cCCCC------CCCCHHHHHHHHHHHHHHhCCCCCh--hhEEECCChH
Confidence 356888777753 57899999988775421 22322 1223467766667777777754321 13444554 5
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
+|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++ +|+++|++.+++ ++++|+++
T Consensus 100 ~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~-------~d~~~l~~~l~~-~~~~v~~~ 161 (370)
T 2z61_A 100 LGLFFALSSIIDDGDEVLIQNPCYPCYKN--------FIRFLGA--KPVFCD-------FTVESLEEALSD-KTKAIIIN 161 (370)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHHHTTC--EEEEEC-------SSHHHHHHHCCS-SEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEeC-------CCHHHHHHhccc-CceEEEEc
Confidence 99999999999999999999998865421 2233454 555544 789999999987 78999888
Q ss_pred CCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC--CC---CcccEEEecccccc--cCCCCeEEEeeCC
Q 009673 259 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PF---KYCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (529)
Q Consensus 259 ~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~---~~aDiv~~S~hK~l--~GprgG~i~~~~~ 329 (529)
+++||+ ..+.+ |.++|++||+++|+|++|..+. ..+.... .+ .+.|++++|+||++ +|+|.|++++++
T Consensus 162 ~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~-~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~- 238 (370)
T 2z61_A 162 SPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLV-YEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISND- 238 (370)
T ss_dssp SSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCB-SSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCH-
T ss_pred CCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcc-cCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECH-
Confidence 888875 77888 9999999999999999976543 2221111 11 14689999999997 577889999988
Q ss_pred CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEE
Q 009673 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 409 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v 409 (529)
++.+.+......... +++....+++..+++......+++..+++.++++.+.+.|.+.|+++..+. .+++.++
T Consensus 239 -----~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~ 311 (370)
T 2z61_A 239 -----EIIEAILKLQQNLFI-SAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPI-GAYYVFP 311 (370)
T ss_dssp -----HHHHHHHHHHHHHTS-SSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCCC-BTTEECC
T ss_pred -----HHHHHHHHHHhhccc-CCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCC-cceEEEE
Confidence 676666543222212 233334444444554311223467788888999999999988888776532 2455566
Q ss_pred ccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 410 DLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 410 ~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
++.. +..++.+.|. ++||.+..+...+ ...++++||++. .++++++++++.|.+++
T Consensus 312 ~~~~---~~~~~~~~l~~~~gi~v~~g~~f~---~~~~~~~Ri~~~------~~~~~i~~~~~~l~~~l 368 (370)
T 2z61_A 312 NIGE---DGREFAYKLLKEKFVALTPGIGFG---SKGKNYIRISYA------NSYENIKEGLERIKEFL 368 (370)
T ss_dssp BCSS---CHHHHHHHHHHHHCEECEEGGGGC---GGGSSBEEEECC------SCHHHHHHHHHHHHHHH
T ss_pred ecCC---CHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEEEe------CCHHHHHHHHHHHHHHH
Confidence 6643 5667777774 7899986532221 112578999976 35799999999988765
No 77
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.93 E-value=8.9e-25 Score=226.84 Aligned_cols=335 Identities=14% Similarity=0.127 Sum_probs=223.8
Q ss_pred cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHH-HHHHHHHHHHHHcCC--CCCCCceeeecCCh
Q 009673 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDE-LETLCQKRALAAFNL--DENKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~-lE~~a~~~la~~~g~--~~~~~~~~V~~~sG 177 (529)
+.|+|..+++ .+++.|.+++...+.+. ..+|+. + ..+ +++...+++.+.+|. +++ +|.+++|
T Consensus 29 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-----~---~~~~lr~~la~~l~~~~g~~~~~~----~v~~t~g 95 (390)
T 1d2f_A 29 DLLPFTISDMDFATAPCIIEALNQRLMHG-VFGYSR-----W---KNDEFLAAIAHWFSTQHYTAIDSQ----TVVYGPS 95 (390)
T ss_dssp -CEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCCC-----S---CCHHHHHHHHHHHHHHSCCCCCGG----GEEEESC
T ss_pred CeeEeeecCCCCCCCHHHHHHHHHHHhCC-CCCCCC-----C---ChHHHHHHHHHHHHHhcCCCCCHH----HEEEcCC
Confidence 5678876665 36799999998877432 123322 1 234 666666788878884 443 3555666
Q ss_pred H-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC--CCCCCHHHHHHHhhhcCCcE
Q 009673 178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAILFRPKL 254 (529)
Q Consensus 178 s-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~--~~~iD~d~le~~i~~~~pkl 254 (529)
+ +|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++++ ++.+|+++|++.+++.++++
T Consensus 96 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~ 165 (390)
T 1d2f_A 96 VIYMVSELIRQWSETGEGVVIHTPAYDAFYK--------AIEGNQR--TVMPVALEKQADGWFCDMGKLEAVLAKPECKI 165 (390)
T ss_dssp HHHHHHHHHHHSSCTTCEEEEEESCCHHHHH--------HHHHTTC--EEEEEECEECSSSEECCHHHHHHHHTSTTEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCcHHHHH--------HHHHCCC--EEEEeecccCCCccccCHHHHHHHhccCCCeE
Confidence 5 89999999999999999999987755421 2234454 5566666533 24699999999997657899
Q ss_pred EEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC---CC-c-ccEEEecccccc--cCCCCe
Q 009673 255 IIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK-Y-CDVVTTTTHKSL--RGPRGG 322 (529)
Q Consensus 255 Ii~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~---~~-~-aDiv~~S~hK~l--~GprgG 322 (529)
|+++.++||+ ..+ +++|.++|++||+++|+|++|..+ ...+....+ +. . .|. ++|+||++ +|.|.|
T Consensus 166 v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G 243 (390)
T 1d2f_A 166 MLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDM-VWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGA 243 (390)
T ss_dssp EEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTC-BCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCE
T ss_pred EEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhhe
Confidence 9888888886 334 899999999999999999997643 322221111 11 2 277 99999987 678889
Q ss_pred EEEeeCCCcchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-c-CcEEec
Q 009673 323 MIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-L-GYKLVS 399 (529)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~-G~~v~~ 399 (529)
+++++++ ++.+.+..... ....++++....+++..+++.. ...+++..+++.++++.+.+.|++ . |+.+..
T Consensus 244 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 317 (390)
T 1d2f_A 244 YGIIENS-----SSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQG-APWLDALRIYLKDNLTYIADKMNAAFPELNWQI 317 (390)
T ss_dssp EEEECSH-----HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCC
T ss_pred EEEECCH-----HHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEec
Confidence 9998643 56666544322 1122344454555555566642 223467788888999999999987 3 777654
Q ss_pred CCCCCceEEEccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 400 GGSDNHLVLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 400 ~gt~~~~~~v~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+ ..+++.++++...+++..++.+.|. ++||.+..+...+ +..++++||++.. ++++++++++.|.+++.
T Consensus 318 ~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~~Ris~~~------~~~~l~~~l~~l~~~l~ 387 (390)
T 1d2f_A 318 P-QSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYG---EEGRGFVRLNAGC------PRSKLEKGVAGLINAIR 387 (390)
T ss_dssp C-SBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGC---GGGTTEEEEECCS------CHHHHHHHHHHHHHHHH
T ss_pred C-CccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccC---CCCCCeEEEEecC------CHHHHHHHHHHHHHHHH
Confidence 3 2345556777533356677777776 7899986532211 1235789999753 36888888888888765
No 78
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.93 E-value=3.7e-24 Score=227.24 Aligned_cols=339 Identities=9% Similarity=0.001 Sum_probs=226.4
Q ss_pred CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCC--CceeeecCChHHHHHHHHHhhc
Q 009673 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK--WGVNVQPLSGSPANFEVYTAIL 189 (529)
Q Consensus 112 n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~--~~~~V~~~sGs~A~~~~l~all 189 (529)
.+.++.+.+++...+..... + +...+...++|+.+++++++++|++.++ ...-+..++|++|+..++.++.
T Consensus 52 ~~~~~~v~e~~~~a~~~~~~-~------~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~ 124 (452)
T 2dgk_A 52 TWDDENVHKLMDLSINKNWI-D------KEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMK 124 (452)
T ss_dssp CCCCHHHHHHHHHTTTCBTT-C------TTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHhccCCC-C------hhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHH
Confidence 35678899999877643211 1 1122446688888999999999998753 1112344566699999988875
Q ss_pred C--------CC-----CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673 190 K--------PH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (529)
Q Consensus 190 ~--------pG-----D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi 256 (529)
+ +| |+|++++ .|.... +.+...|. +++.++++++++.+|+++|++++++ +|++|+
T Consensus 125 ~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~--------~~~~~~G~--~v~~v~~~~~~~~~d~~~l~~~i~~-~t~~v~ 192 (452)
T 2dgk_A 125 WRWRKRMEAAGKPTDKPNLVCGP-VQICWH--------KFARYWDV--ELREIPMRPGQLFMDPKRMIEACDE-NTIGVV 192 (452)
T ss_dssp HHHHHHHHHTTCCCSCCEEEESS-CCHHHH--------HHHHHTTC--EEEECCCBTTBCSCCHHHHHHHCCT-TEEEEE
T ss_pred HHHHHHHHhcCCCCCCcEEEECC-CcHHHH--------HHHHHcCc--eEEEEecCCCCCeECHHHHHHHHhh-CCEEEE
Confidence 4 66 5898877 553221 23345565 7777777744689999999999987 789999
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHh------CCEEEEeccccccccc--ccccCCC--CCcccEEEeccccccc-CCCCeE
Q 009673 257 AGASAYPR--DFDYPRMRQIADAV------GALLMMDMAHISGLVA--ASVVADP--FKYCDVVTTTTHKSLR-GPRGGM 323 (529)
Q Consensus 257 ~~~s~~p~--~~d~~~i~~ia~~~------g~~livD~ah~~Gli~--~~~~~~~--~~~aDiv~~S~hK~l~-GprgG~ 323 (529)
++.++|++ ..|+++|.++|+++ |+++++|++|..+... .+..+.. ..++|++++++||++. +++.|+
T Consensus 193 ~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~ 272 (452)
T 2dgk_A 193 PTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGW 272 (452)
T ss_dssp CBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEE
T ss_pred EEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEE
Confidence 88877765 78999999999996 9999999997655431 1111111 2378999999999874 456699
Q ss_pred EEeeCCCcchhHHH-hhhccc-ccC-------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-
Q 009673 324 IFFKKDPVLGVELE-SAINNA-VFP-------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL- 393 (529)
Q Consensus 324 i~~~~~~~~~~~l~-~~i~~~-~~p-------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~- 393 (529)
++++++ ++. +.+... .+. ...++......+++..+++.+...++.+..++..++++++.+.|++.
T Consensus 273 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~ 347 (452)
T 2dgk_A 273 VIWRDE-----EALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLG 347 (452)
T ss_dssp EEESSG-----GGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCH-----HHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999763 222 222110 010 12333333344455556655444567888999999999999999985
Q ss_pred CcEEecCC---CCCceEEEccCCC---CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673 394 GYKLVSGG---SDNHLVLVDLRPM---GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 467 (529)
Q Consensus 394 G~~v~~~g---t~~~~~~v~~~~~---~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~ 467 (529)
|++++.++ ...+++.+.+... .++..++.+.|.+.||.+.....|... ...+.+||++...+ +++|++
T Consensus 348 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~--~~~~~lRis~~~~~----t~e~id 421 (452)
T 2dgk_A 348 PYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEA--TDIVVMRIMCRRGF----EMDFAE 421 (452)
T ss_dssp SEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTC--TTCEEEEEECCTTC----CHHHHH
T ss_pred CeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeCCccc--CCeEEEEEEecCCC----CHHHHH
Confidence 58887542 2234455544331 245578888898899976432223221 12457999976543 589999
Q ss_pred HHHHHHHHHHHHH
Q 009673 468 AIADFIHEGVEIT 480 (529)
Q Consensus 468 ~la~~i~~~~~~~ 480 (529)
++++.|++++...
T Consensus 422 ~li~~l~~~~~~~ 434 (452)
T 2dgk_A 422 LLLEDYKASLKYL 434 (452)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999887643
No 79
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.93 E-value=4e-25 Score=230.94 Aligned_cols=342 Identities=16% Similarity=0.068 Sum_probs=224.6
Q ss_pred hcceeEecCCC-----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC
Q 009673 102 FKSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS 176 (529)
Q Consensus 102 ~~~i~L~asen-----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s 176 (529)
++.|+|..+++ ..++.+++++...+.+.+ .+|+. .....++++...+++.+.+|++.+. .+|.+++
T Consensus 38 ~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~------~~g~~~l~~~la~~l~~~~g~~~~~--~~v~~t~ 108 (406)
T 1xi9_A 38 IKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGH-NYYGD------SEGLPELRKAIVEREKRKNGVDITP--DDVRVTA 108 (406)
T ss_dssp CCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTC-CSCCC------TTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEES
T ss_pred CCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCcHHHHHHHHHHHHHhcCCCCCH--HHEEEcC
Confidence 35688877766 457899999988775432 12322 1223466766667887777765321 2455566
Q ss_pred hH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcE
Q 009673 177 GS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKL 254 (529)
Q Consensus 177 Gs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pkl 254 (529)
|+ +|+..++.++++|||+|++++|.|.++. ..+...|. +++.+++++ +++.+|+++|++.+++ ++++
T Consensus 109 g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~ 177 (406)
T 1xi9_A 109 AVTEALQLIFGALLDPGDEILVPGPSYPPYT--------GLVKFYGG--KPVEYRTIEEEDWQPDIDDIRKKITD-RTKA 177 (406)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHHTTC--EEEEEEEEGGGTSEECHHHHHHHCCT-TEEE
T ss_pred ChHHHHHHHHHHhCCCCCEEEEcCCCCccHH--------HHHHHcCC--EEEEeecCCCcCCcCCHHHHHHhhCc-CceE
Confidence 65 9999999999999999999999875432 12334554 566666654 3567899999999987 7899
Q ss_pred EEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCC--C-Ccc-cEEEecccccc--cCCCCeE
Q 009673 255 IIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--F-KYC-DVVTTTTHKSL--RGPRGGM 323 (529)
Q Consensus 255 Ii~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~--~-~~a-Div~~S~hK~l--~GprgG~ 323 (529)
|++++++||+ .. ++++|.++|+++|+++|+|++|..+. ..+..... + ... |++++|+||++ +|+|.|+
T Consensus 178 v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 256 (406)
T 1xi9_A 178 IAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMT-YEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGY 256 (406)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCB-SSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEE
T ss_pred EEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccc-cCCCCCCHHHcCCCceEEEEeccccccCCCccEEEE
Confidence 9888888876 33 48999999999999999999976543 22111110 1 235 78999999998 4778899
Q ss_pred EE--eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecC
Q 009673 324 IF--FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG 400 (529)
Q Consensus 324 i~--~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~ 400 (529)
++ .+++. ..++.+.+....... . +++....+++..+++.. ...+++..+++.++++.+.+.|++. |+.+..+
T Consensus 257 ~~~~~~~~~--~~~l~~~l~~~~~~~-~-~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 331 (406)
T 1xi9_A 257 MYFVDPENK--LSEVREAIDRLARIR-L-CPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNEIPGISTTKP 331 (406)
T ss_dssp EEEECTTCT--THHHHHHHHHHHHHT-C-CSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCC
T ss_pred EEEecCchh--HHHHHHHHHHHHHhh-c-CCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecC
Confidence 98 66510 002444443221111 1 22333344444566532 2335777888899999999999885 8877653
Q ss_pred CCCCceEEEccCCC-CCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 401 GSDNHLVLVDLRPM-GIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 401 gt~~~~~~v~~~~~-~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
..+.+.++++... +.+..++.+.| +++||.+..+...+ ...++++||++. .++++++++++.|.++++
T Consensus 332 -~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~lRis~~------~~~~~i~~~~~~l~~~l~ 401 (406)
T 1xi9_A 332 -QGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFG---EYGAGHFRAVFL------PPIEILEEAMDRFEKFMK 401 (406)
T ss_dssp -CBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGC---GGGTTBEEEECC------SCHHHHHHHHHHHHHHHH
T ss_pred -CeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcC---CCCCCEEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 2244455565421 45667777666 48999985432221 112578999975 458999999999988875
Q ss_pred H
Q 009673 479 I 479 (529)
Q Consensus 479 ~ 479 (529)
.
T Consensus 402 ~ 402 (406)
T 1xi9_A 402 E 402 (406)
T ss_dssp H
T ss_pred H
Confidence 3
No 80
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.93 E-value=2.8e-25 Score=232.28 Aligned_cols=338 Identities=15% Similarity=0.087 Sum_probs=225.2
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
+.|+|..+++. .++.|++++...+.+....+|+. .....++++...+++.+.+|++.+.. .+|.+++|+ +
T Consensus 48 ~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr~~ia~~~~~~~g~~~~~~-~~v~~t~G~~~ 120 (404)
T 2o1b_A 48 PLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGA------FHGKEAFKQAIVDFYQRQYNVTLDKE-DEVCILYGTKN 120 (404)
T ss_dssp CCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCC------TTCCHHHHHHHHHHHHHHHCCCCCTT-TSEEEESSHHH
T ss_pred CEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCCc-ccEEEcCCcHH
Confidence 45788777754 57899999987764321123332 11134666666677777779762100 134445654 8
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++++++.+|+++|++.+++ ++++|+++.
T Consensus 121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~ 189 (404)
T 2o1b_A 121 GLVAVPTCVINPGDYVLLPDPGYTDYLA--------GVLLADG--KPVPLNLEPPHYLPDWSKVDSQIID-KTKLIYLTY 189 (404)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCSSHHH--------HHHHTTC--EEEEEECCTTTCCCCGGGSCHHHHH-HEEEEEECS
T ss_pred HHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHCCC--EEEEeccCcccCcCCHHHHHHhhcc-CceEEEEcC
Confidence 9999999999999999999998765431 2234454 6666666654567899999998876 789999988
Q ss_pred CCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCC--CC---cccEEEecccccc--cCCCCeEEEee
Q 009673 260 SAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FK---YCDVVTTTTHKSL--RGPRGGMIFFK 327 (529)
Q Consensus 260 s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~--~~---~aDiv~~S~hK~l--~GprgG~i~~~ 327 (529)
++||+ .. ++++|.++|+++|++||+|++|..+ ...+..... +. ..+++++|+||++ +|+|.|+++++
T Consensus 190 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~ 268 (404)
T 2o1b_A 190 PNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAF-GFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGN 268 (404)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTC-BSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEEC
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhc-ccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecC
Confidence 88876 44 4788999999999999999997643 322211111 11 3468999999998 57888999997
Q ss_pred CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 407 (529)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~ 407 (529)
+ ++.+.+........ .+++....+++..+|+.. ...+++..+++.++++.+.+.|++.|+.+..+. .+.++
T Consensus 269 ~------~~~~~l~~~~~~~~-~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~g~~~ 339 (404)
T 2o1b_A 269 K------DMIQALKKYQTHTN-AGMFGALQDAAIYALNHY-DDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAK-GGIYV 339 (404)
T ss_dssp H------HHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCEECCC-BSSEE
T ss_pred H------HHHHHHHHHHhhcc-CCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCC-cceEE
Confidence 7 67666654322111 233444444445566542 234577788888999999999998888876542 24556
Q ss_pred EEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
++++. .+++..++.+.| +++||.+..+...+ ...++++||++.. ++++++++++.|.++++
T Consensus 340 ~~~~~-~~~~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~iRis~~~------~~e~l~~~l~~l~~~l~ 401 (404)
T 2o1b_A 340 WLETP-PGYDSEQFEQFLVQEKSILVAPGKPFG---ENGNRYVRISLAL------DDQKLDEAAIRLTELAY 401 (404)
T ss_dssp EEECC-TTCCHHHHHHHHHHHHCEECEESGGGC---GGGTTEEEEECCS------CTTHHHHHHHHHHGGGG
T ss_pred EEeCC-CCCCHHHHHHHHHHHCCEEEeCchhhC---cCCCCeEEEEEcC------CHHHHHHHHHHHHHHHH
Confidence 77774 345666666665 57899986532221 1135789999753 36788888888876653
No 81
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.93 E-value=5.9e-25 Score=225.84 Aligned_cols=331 Identities=13% Similarity=0.080 Sum_probs=216.7
Q ss_pred ceeEecCCCCCcHHHHHHHhhhhhccCCCCCC-CCCCCCCchhHHHHHHHHHHHHHHHcCCCCC-CCceeeecCCh-HHH
Q 009673 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDEN-KWGVNVQPLSG-SPA 180 (529)
Q Consensus 104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p-~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~-~~~~~V~~~sG-s~A 180 (529)
.+.+.+++.++|+.|++++...+.+.+..|.. ....+.+..+ .++.+.+++++++++|++.+ + + |.+++| ++|
T Consensus 5 ~~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~la~~~g~~~~~~--~-i~~t~g~t~a 80 (362)
T 2c0r_A 5 AYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVY-EAVHNEAQARLLALLGNPTGYK--V-LFIQGGASTQ 80 (362)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHH-HHHHHHHHHHHHHHTTCCSSEE--E-EEESSHHHHH
T ss_pred eeeccCCCCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHH-HHHHHHHHHHHHHHhCCCCCcE--E-EEECCCchHH
Confidence 46777888889999999999887543222111 0001112223 33444677999999999753 2 1 344554 599
Q ss_pred HHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEEEEcC
Q 009673 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 181 ~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~~~pklIi~~~ 259 (529)
+..++.++++|||+|+++++.+.++. +. ..+...| ....++++.+. .+..+|.++++ +++ +||+|++++
T Consensus 81 ~~~~~~~l~~~gd~vl~~~~~~~~~~---~~---~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~-~t~~v~~~~ 150 (362)
T 2c0r_A 81 FAMIPMNFLKEGQTANYVMTGSWASK---AL---KEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQD-NAAYLHLTS 150 (362)
T ss_dssp HHHHHHHHCCTTCEEEEEECSHHHHH---HH---HHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCT-TEEEEEEES
T ss_pred HHHHHHhcCCCCCeEEEEecCcHhHH---HH---HHHHHhC-CeEEEecccccccccCCCHHHcc--cCC-CcCEEEEeC
Confidence 99999999999999998865432221 10 1122234 34444432111 12246776654 555 789999988
Q ss_pred CCCCC---CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhH
Q 009673 260 SAYPR---DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVE 335 (529)
Q Consensus 260 s~~p~---~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~ 335 (529)
++||+ ..|+++| +|+++++|++|..|.... .+...|++++|+||++ ||.| |++++++ +
T Consensus 151 ~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~-----~~~~~d~~~~s~~K~~-g~~G~G~l~~~~------~ 212 (362)
T 2c0r_A 151 NETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPF-----DLNQFGLVYAGAQKNL-GPSGVTVVIVRE------D 212 (362)
T ss_dssp EETTTTEECSSCCCC------TTSCEEEECTTTTTSSCC-----CGGGCSEEEEETTTTT-CCSSCEEEEEEG------G
T ss_pred CcCccceeccccccc------CCCEEEEEChhhccCCcc-----chhHCcEEEEeccccc-cCcCcEEEEEcH------H
Confidence 77776 2466665 899999999988764321 2333489999999999 6878 9999988 4
Q ss_pred HHhhhcccc-----------cCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcC-c-EEecCC
Q 009673 336 LESAINNAV-----------FPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-Y-KLVSGG 401 (529)
Q Consensus 336 l~~~i~~~~-----------~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G-~-~v~~~g 401 (529)
+.+.+.... .....++++...++++..+++.+... ++++..+++.++++++.+.|++.| + ++..+.
T Consensus 213 ~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 292 (362)
T 2c0r_A 213 LVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDV 292 (362)
T ss_dssp GSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCG
T ss_pred HHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCCh
Confidence 544443210 00124577777788888888865443 568888999999999999999887 6 775321
Q ss_pred --CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 402 --SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 402 --t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.....+++.+. .+.+..++.+.|++.||.+ .||... .++|||++...+ +++|++++++.|+++++
T Consensus 293 ~~~~~~~~~~~~~-~~~~~~~~~~~L~~~gi~~----~~g~~~---~~~iRis~~~~~----~~e~i~~l~~~l~~~~~ 359 (362)
T 2c0r_A 293 DSRSDMNITFRLA-SEELEKEFVKASEQEGFVG----LKGHRS---VGGLRASIYNAV----PYESCEALVQFMEHFKR 359 (362)
T ss_dssp GGBCSSEEEEECS-CHHHHHHHHHHHHHTTEES----CBCCTT---TCSEEEECCTTS----CHHHHHHHHHHHHHHHH
T ss_pred HHcCCcEEEEEcC-CcchHHHHHHHHHHCCCee----ccCCCC---CCEEEEECCCCC----CHHHHHHHHHHHHHHHH
Confidence 11234455553 2335667888899999976 344321 467999986543 48999999999988765
No 82
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.93 E-value=2.1e-24 Score=224.15 Aligned_cols=333 Identities=14% Similarity=0.092 Sum_probs=222.8
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC---CCCCceeeecCCh
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD---ENKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~---~~~~~~~V~~~sG 177 (529)
+.|+|..+++. +++.|++++...+... .+|+.. .| ..++++...+++.+.+|.+ ++. +|.+++|
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~~---~g---~~~lr~~la~~l~~~~g~~~~~~~~---~i~~t~g 99 (396)
T 3jtx_A 31 EAVPLHIGEPKHPTPKVITDALTASLHEL--EKYPLT---AG---LPELRQACANWLKRRYDGLTVDADN---EILPVLG 99 (396)
T ss_dssp CCEECSCCSCCSCCCHHHHHHHHHTGGGG--GSCCCT---TC---CHHHHHHHHHHHHHHTTTCCCCTTT---SEEEESS
T ss_pred CeEEeCCcCCCCCCCHHHHHHHHHHhhhc--cCCCCC---CC---cHHHHHHHHHHHHHhcCCCCCCCCC---eEEEcCC
Confidence 56888877763 5799999998776422 234331 11 2456666668888888964 430 3444665
Q ss_pred H-HHHHHHHHhhcCCC-----CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcC
Q 009673 178 S-PANFEVYTAILKPH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR 251 (529)
Q Consensus 178 s-~A~~~~l~all~pG-----D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~ 251 (529)
+ +|+..++.++++|| |+|++.+|.|.++.. .+...|. +++.++++.+++.+|+++|++.+++ +
T Consensus 100 ~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~~g~~~d~~~l~~~~~~-~ 168 (396)
T 3jtx_A 100 SREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEG--------ATLLGGG--EIHFANCPAPSFNPDWRSISEEVWK-R 168 (396)
T ss_dssp HHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHH--------HHHHTTC--EEEEEECCTTTCCCCGGGSCHHHHH-T
T ss_pred cHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHH--------HHHHcCC--EEEEeecCCCCCccCHHHHHHhhcc-C
Confidence 5 99999999999997 799999987754321 2334554 6666666655678999999999988 8
Q ss_pred CcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC----------CcccEEEecccccc
Q 009673 252 PKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF----------KYCDVVTTTTHKSL 316 (529)
Q Consensus 252 pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~----------~~aDiv~~S~hK~l 316 (529)
+++|+++.++||+ ..+ +++|.++|++||+++|+|++|.. +...+..+... ...++++.|+||++
T Consensus 169 ~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 247 (396)
T 3jtx_A 169 TKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSE-IYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRS 247 (396)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTT-CCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTS
T ss_pred cEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCchHHhhhhhcccccCcEEEEecccccc
Confidence 9999998888886 444 55689999999999999999653 33332111110 13568999999964
Q ss_pred --cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC
Q 009673 317 --RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG 394 (529)
Q Consensus 317 --~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G 394 (529)
+|.|.|++++++ ++.+.+....... ..+++....+++..+++. ...+.+..+++.++++.+.+.|.+.
T Consensus 248 ~~~G~r~G~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~- 317 (396)
T 3jtx_A 248 NVPGLRSGFVAGDA------ELLKNFLLYRTYH-GSAMSIPVQRASIAAWDD--EQHVIDNRRLYQEKFERVIPILQQV- 317 (396)
T ss_dssp SCGGGCCEEEEECH------HHHHHHHHHHHHH-TCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHTTT-
T ss_pred CCcccceEEEEeCH------HHHHHHHHHHhhc-ccCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 788899999877 6766665432211 123344444444455653 3445777888888899999998764
Q ss_pred cEEecCCCCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCC---CCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673 395 YKLVSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVAIA 470 (529)
Q Consensus 395 ~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~---~~~~~~~iRig~~~~tt~g~~~~d~~~la 470 (529)
+.+..+ ..++++|+++.. .+..++.+.| +++||.+..+..++.. .+...+++||++.. +++++++++
T Consensus 318 ~~~~~~-~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~------~~~~i~~~l 388 (396)
T 3jtx_A 318 FDVKLP-DASFYIWLKVPD--GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA------DVATCVKAA 388 (396)
T ss_dssp SCCCCC-SSSSEEEEECTT--SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS------CHHHHHHHH
T ss_pred CCccCC-CeeEEEEEECCC--CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC------CHHHHHHHH
Confidence 333333 235667777753 3556665555 7789999654432211 12346799999642 589999999
Q ss_pred HHHHHHH
Q 009673 471 DFIHEGV 477 (529)
Q Consensus 471 ~~i~~~~ 477 (529)
+.|.+++
T Consensus 389 ~~l~~~l 395 (396)
T 3jtx_A 389 EDIVSLY 395 (396)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9988754
No 83
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.93 E-value=2e-24 Score=224.08 Aligned_cols=321 Identities=13% Similarity=0.105 Sum_probs=213.3
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cCCC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~pG 192 (529)
+++++++++...+.... .+ |+. .+...+++ +.+++++|.+. .|.++||++|+..++.++ ++||
T Consensus 15 ~~~~~~~a~~~~l~~~~-~~-----~~~-~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~al~~~l~~l~~~~g 78 (388)
T 1b9h_A 15 YDDAERNGLVRALEQGQ-WW-----RMG-GDEVNSFE----REFAAHHGAAH-----ALAVTNGTHALELALQVMGVGPG 78 (388)
T ss_dssp CCHHHHHHHHHHHHTSC-CB-----TTT-CSHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHHHHHHTTCCTT
T ss_pred CCHHHHHHHHHHHHcCC-ee-----ecC-CHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCCc
Confidence 34899999988876421 01 122 23345555 67888999863 466799999999999999 8999
Q ss_pred CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHH
Q 009673 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPR 270 (529)
Q Consensus 193 D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p--~~~d~~~ 270 (529)
|+|++++++|.+... .+...|. +++.++++++++.+|+++|++.+++ ++++|+ ++|+ ...|+++
T Consensus 79 d~Vi~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~---~~n~tG~~~~l~~ 144 (388)
T 1b9h_A 79 TEVIVPAFTFISSSQ--------AAQRLGA--VTVPVDVDAATYNLDPEAVAAAVTP-RTKVIM---PVHMAGLMADMDA 144 (388)
T ss_dssp CEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCCBCHHHHHHHCCT-TEEEEC---CBCGGGCCCCHHH
T ss_pred CEEEECCCccHHHHH--------HHHHcCC--EEEEEecCCCcCCCCHHHHHHhcCc-CceEEE---EeCCccCcCCHHH
Confidence 999999998765531 2334454 7778888766688999999999976 788877 4444 3789999
Q ss_pred HHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeEEEeeCCCcchhHH--HhhhcccccC--
Q 009673 271 MRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVEL--ESAINNAVFP-- 346 (529)
Q Consensus 271 i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l--~~~i~~~~~p-- 346 (529)
|.++|+++|++||+|++|+.|....+.....+..+++.++|.||+++|+++|+++++++ .+ .+.+......
T Consensus 145 i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~~G~~~~~~~-----~~~~~~~~~~~~~~~~ 219 (388)
T 1b9h_A 145 LAKISADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDG-----ETEKYETAFLRHSCGR 219 (388)
T ss_dssp HHHHHHHHTCCBCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTT-----CHHHHHHHHHHTBTTC
T ss_pred HHHHHHHcCCEEEEecchhcCCccCCeecccccceEEEEccCCCcccCCCeEEEEECCH-----HHHHHHHHHHHHhCCC
Confidence 99999999999999999988766533211111123455555669998999999999874 24 3333211100
Q ss_pred ---------CCCCC---ChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCC-----CCCceEE
Q 009673 347 ---------GLQGG---PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG-----SDNHLVL 408 (529)
Q Consensus 347 ---------~~~g~---p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~g-----t~~~~~~ 408 (529)
...|+ ++....+++..++ ..+++..+++.++++++.+.|++. |+.+..+. ...++++
T Consensus 220 ~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~-----~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 294 (388)
T 1b9h_A 220 PRDDRRYFHKIAGSNMRLNEFSASVLRAQL-----ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAM 294 (388)
T ss_dssp CTTCSSCCCCSCCCBCBCBHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEE
T ss_pred CccCccceeecccccCCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEE
Confidence 01122 2322322221122 234667788888999999999885 88876421 1245667
Q ss_pred EccCCCC-CcHHHHHHhHhcCCeEEcCCCCCCCCCC------------------C------CCCeEEEccCCCccCCC-C
Q 009673 409 VDLRPMG-IDGARVEKILDMASITLNKNSVPGDKSA------------------L------VPGGIRIGSPAMTTRGF-S 462 (529)
Q Consensus 409 v~~~~~~-i~~~~~~~~L~~~GI~v~~~~~Pg~~~~------------------~------~~~~iRig~~~~tt~g~-~ 462 (529)
+.+.... .+.+++.+.|.++||.++.++.|.+..+ + ..+.|||++... + +
T Consensus 295 ~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~----~~t 370 (388)
T 1b9h_A 295 FRIPGLTEERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVL----LAG 370 (388)
T ss_dssp EECTTCCHHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGG----GSC
T ss_pred EEeCCcCcccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCC----CCC
Confidence 7775311 2456788888889999976543321100 0 013589987543 4 5
Q ss_pred HHHHHHHHHHHHHHHH
Q 009673 463 EKEFVAIADFIHEGVE 478 (529)
Q Consensus 463 ~~d~~~la~~i~~~~~ 478 (529)
++|++++++.|+++++
T Consensus 371 ~edi~~~~~~l~~~~~ 386 (388)
T 1b9h_A 371 EPELHATAEIIADAVA 386 (388)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8999999999998775
No 84
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.93 E-value=4e-24 Score=224.98 Aligned_cols=350 Identities=15% Similarity=0.157 Sum_probs=215.6
Q ss_pred cceeEecCCC-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-HHH
Q 009673 103 KSLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPA 180 (529)
Q Consensus 103 ~~i~L~asen-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s~A 180 (529)
+.+.|..+++ ++|+.|++++...+.+.+ +||...|..+... .+....+++++++++|++++ +|.+++| ++|
T Consensus 18 ~~~~Ld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~a 90 (432)
T 3a9z_A 18 RKVYMDYNATTPLEPEVIQAVTEAMKEAW--GNPSSSYVAGRKA-KDIINTARASLAKMIGGKPQ----DIIFTSGGTES 90 (432)
T ss_dssp CCEECBTTTCCCCCHHHHHHHHHHHHHCC--SCTTCSSHHHHHH-HHHHHHHHHHHHHHHTCCGG----GEEEESCHHHH
T ss_pred CcEEeeCCccCCCCHHHHHHHHHHHHHhc--CCCccCcHHHHHH-HHHHHHHHHHHHHHcCCCcC----eEEEeCChHHH
Confidence 4567765554 679999999998876533 4555443222222 23334566899999999764 3444565 599
Q ss_pred HHHHHHhhc--------CCCCEEEEcCCCCCccc-------cccccc--cccccccccceEEEEEcccCCCCCCCCHHHH
Q 009673 181 NFEVYTAIL--------KPHDRIMGLDLPHGGHL-------SHGFMT--PKRRVSGTSIYFESMPYRLDESTGLVDYDML 243 (529)
Q Consensus 181 ~~~~l~all--------~pGD~Vl~~~~~~~g~~-------s~g~~~--~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~l 243 (529)
+..++.+++ +|||+|++++|.+.+.. .|.... ........|. +++.++++++++.+|+++|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~--~v~~v~~~~~~~~~d~~~l 168 (432)
T 3a9z_A 91 NNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVA--EVTFVPVSKVNGQVEVEDI 168 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSC--EEEEECCCTTTSSCCHHHH
T ss_pred HHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCc--EEEEEecCcccCCcCHHHH
Confidence 999998886 59999999998775420 000000 0000011343 6677777644678999999
Q ss_pred HHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhC----------CEEEEecccccccccccccCCCCCcccEEEec
Q 009673 244 EKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVG----------ALLMMDMAHISGLVAASVVADPFKYCDVVTTT 311 (529)
Q Consensus 244 e~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g----------~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S 311 (529)
++.+++ ++++|++++++||+ ..|+++|.++|+++| ++||+|++|..|....+... .++|++++|
T Consensus 169 ~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~---~~~d~~~~s 244 (432)
T 3a9z_A 169 LAAVRP-TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVED---LGVDFLTIV 244 (432)
T ss_dssp HHTCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHH---HCCSEEEEE
T ss_pred HHhccC-CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhh---cCCCEEEEe
Confidence 999987 89999999888876 789999999999999 99999999876532111100 157999999
Q ss_pred ccccccCCCCeEEEeeCCCcchhHH-Hhhhccccc------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673 312 THKSLRGPRGGMIFFKKDPVLGVEL-ESAINNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (529)
Q Consensus 312 ~hK~l~GprgG~i~~~~~~~~~~~l-~~~i~~~~~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~ 384 (529)
+||++ ||+.|+++++++ + ...+....+ ....++++...++++..+++... .++++..+++.++++
T Consensus 245 ~~K~~-g~~~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~-~~~~~~~~~~~~~~~ 316 (432)
T 3a9z_A 245 GHKFY-GPRIGALYVRGV------GKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVS-ENCETYEAHMRDIRD 316 (432)
T ss_dssp GGGTT-CCSCEEEEETTB------TTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred hhHhc-CCcceEEEEccc------cccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHH
Confidence 99987 799999999873 2 222322111 11235566777777777777553 356788889999999
Q ss_pred HHHHHHHh-cCcEEe--cC--C-C-CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCC--CCCC----------CCC--
Q 009673 385 ALASRLVE-LGYKLV--SG--G-S-DNHLVLVDLRPMGIDGARVEKILDMASITLNKNS--VPGD----------KSA-- 443 (529)
Q Consensus 385 ~l~~~L~~-~G~~v~--~~--g-t-~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~--~Pg~----------~~~-- 443 (529)
++.+.|++ .|+.+. .+ + . ......+.+...+.+...+.+.| .+|.+..+. .++. .+.
T Consensus 317 ~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~ 394 (432)
T 3a9z_A 317 YLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQC--QTLLASVGASCHSDHEDRPSPVLLSCGIPV 394 (432)
T ss_dssp HHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHC--SSEECBSSCGGGGGGTTSCCHHHHHTTCCH
T ss_pred HHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHh--cCeEEeccccccCCCCCCccHHHHhcCCCc
Confidence 99999988 466543 21 0 1 11233344433233455555444 266654331 1110 000
Q ss_pred -CCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 444 -LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 444 -~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
...+.|||++...+ +++|++++++.|+++++.
T Consensus 395 ~~~~~~iRis~~~~~----t~eei~~~~~~l~~~~~~ 427 (432)
T 3a9z_A 395 DVARNAVRLSVGRST----TRAEVDLIVQDLKQAVNQ 427 (432)
T ss_dssp HHHTTEEEEECCTTC----CHHHHHHHHHHHHHHHHH
T ss_pred cccCceEEEEcCCCC----CHHHHHHHHHHHHHHHHH
Confidence 01378999987543 489999999999988753
No 85
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.93 E-value=2.5e-24 Score=226.30 Aligned_cols=282 Identities=17% Similarity=0.131 Sum_probs=198.2
Q ss_pred cCChHHH---HHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhccC----CCCCCCCCCCCCchhHHHHHHHHHHHH
Q 009673 85 EADPEVC---EIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKY----SEGLPGKRYYGGNEYIDELETLCQKRA 157 (529)
Q Consensus 85 ~~d~~~~---~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~y----~~G~p~~r~~~g~~~~d~lE~~a~~~l 157 (529)
.+++++. +.++++..++...+++++++|. ++|++++.+...... ++||+..| ...+++| +++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~n~--~~Vl~a~~~~~~~~~~~~~~~gy~Y~~-----~g~~~Le----~~l 83 (427)
T 3hvy_A 15 NINERVLELYERALNDVEKEFKYYDEIREYNQ--LKVLKAFQEERISESHFTNSSGYGYND-----IGRDSLD----RVY 83 (427)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTCTTC-----HHHHHHH----HHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHhcccCcCCCCCc-----hhHHHHH----HHH
Confidence 4577766 5556777777788999999987 899999988644322 33444323 2356666 778
Q ss_pred HHHcCCCCCCCceeee--cCChHHHHHHHHHhhcCCCCEEEEcC-CCCCcccc--cccccc-ccccccccceEEEEEccc
Q 009673 158 LAAFNLDENKWGVNVQ--PLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLS--HGFMTP-KRRVSGTSIYFESMPYRL 231 (529)
Q Consensus 158 a~~~g~~~~~~~~~V~--~~sGs~A~~~~l~all~pGD~Vl~~~-~~~~g~~s--~g~~~~-~~~i~~~g~~~~~v~~~v 231 (529)
++++|.+. ..|+ ++||++||..++.++++|||+|++.+ +.|+++.. ++.... ...+...|. +++.+++
T Consensus 84 A~l~g~e~----alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~--~~~~v~~ 157 (427)
T 3hvy_A 84 ANIFNTES----AFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGV--KYKMVDL 157 (427)
T ss_dssp HHHHTCSE----EEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTC--EEEECCC
T ss_pred HHHhCCCc----eEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCC--EEEEecC
Confidence 99999986 3444 68999999999999999999999998 77765431 000000 011223454 6666665
Q ss_pred CCCCCCCCHHHHHHHhhh-cCCcEEEEcC----CCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCC
Q 009673 232 DESTGLVDYDMLEKTAIL-FRPKLIIAGA----SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPF 302 (529)
Q Consensus 232 ~~~~~~iD~d~le~~i~~-~~pklIi~~~----s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~ 302 (529)
+++.+|+|+|++++++ .+||+|+++. ++||+ ..|+++|+++|++ +|+++++|++|..+... ..|+
T Consensus 158 --~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~----~~p~ 231 (427)
T 3hvy_A 158 --KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEE----KEPT 231 (427)
T ss_dssp --BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSS----SCGG
T ss_pred --CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccC----CCCc
Confidence 4688999999999983 3899999987 77775 5689999999999 89999999998765421 2344
Q ss_pred C-cccEEEecccccccC---CCCeEEEeeCCCcchhHHHhhhccc-ccCCCC--CCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 303 K-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINNA-VFPGLQ--GGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 303 ~-~aDiv~~S~hK~l~G---prgG~i~~~~~~~~~~~l~~~i~~~-~~p~~~--g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
. ++|++++|+||+++| ++||+|++++ ++.+++... ..++.. .++.......+...++. ...+
T Consensus 232 ~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~------~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~-----~~~r 300 (427)
T 3hvy_A 232 DVGADIIAGSLIKNIGGGIATTGGYIAGKE------EYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFM-----APHV 300 (427)
T ss_dssp GGTCSEEEEETTSGGGTTTCCSCEEEEECH------HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHH-----HHHH
T ss_pred ccCCeEEEECCcccccccccceEEEEEECH------HHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhH-----HHHH
Confidence 4 689999999999977 8899999987 787777652 233331 12212111111112221 2467
Q ss_pred HHHHHHHHHHHHHHHHhcCcEEecC
Q 009673 376 QNKVVSNCRALASRLVELGYKLVSG 400 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~~G~~v~~~ 400 (529)
+++..+|+.++++.|++.|+++.++
T Consensus 301 ~~~~~~~a~~la~~L~~~g~~V~p~ 325 (427)
T 3hvy_A 301 TIEAVKGAVFCARIMELAGFDVLPK 325 (427)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEESC
T ss_pred HHHHHHHHHHHHHHHHhCCCeecCC
Confidence 8889999999999999999988543
No 86
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.93 E-value=7.2e-25 Score=227.30 Aligned_cols=307 Identities=11% Similarity=0.094 Sum_probs=207.7
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+.++.+.++ .+++++++++|.+. ..+.+.||++|+.+++. +++|||+|+++++.|.++. +. ......|
T Consensus 30 ~~~~~~~~~-~~~~~l~~~~~~~~----~v~~~~sgt~a~~~~~~-~~~~gd~vi~~~~~~~~~~---~~---~~~~~~g 97 (379)
T 3ke3_A 30 SKAFQEVMN-DLLSNLKTVYNAEA----AVIIPGSGTYGMEAVAR-QLTIDEDCLIIRNGWFSYR---WT---QILEKGK 97 (379)
T ss_dssp SHHHHHHHH-HHHHHHHHHHTCSE----EEEEESCHHHHHHHHHH-HHCTTCEEEEEECSHHHHH---HH---HHHHHHC
T ss_pred CHHHHHHHH-HHHHHHHHHhCCCC----EEEEcCChhHHHHHHHH-hCCCCCeEEEEeCCchhHH---HH---HHHHHhC
Confidence 445554444 56789999999872 33455688899998775 4579999999987553321 10 0111223
Q ss_pred ceEEEEEcccCCC-------C-CCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEeccc
Q 009673 222 IYFESMPYRLDES-------T-GLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAH 288 (529)
Q Consensus 222 ~~~~~v~~~v~~~-------~-~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah 288 (529)
..++++.++++.. . +.+|++++++.++..++++|++...++++ ..| +++|+++|++||+++++|++|
T Consensus 98 ~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~ 177 (379)
T 3ke3_A 98 FAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIA 177 (379)
T ss_dssp CSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEecc
Confidence 2234444444310 1 26899999999965589999887655544 678 999999999999999999998
Q ss_pred ccccccccccCCCCC--cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccc---c---------------CC
Q 009673 289 ISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAV---F---------------PG 347 (529)
Q Consensus 289 ~~Gli~~~~~~~~~~--~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~---~---------------p~ 347 (529)
. |... ..+. ++|++++|+||+|.||.| |++++++ ++.+.+.... + .+
T Consensus 178 ~-g~~~-----~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g 245 (379)
T 3ke3_A 178 S-GCVW-----LDMKELGIDVLISAPQKGWSSTPCAGLVMLSA------AAIKKVESTESNCFSLDLKQWLTIMRAYENG 245 (379)
T ss_dssp C-TTCC-----CCHHHHTCSEEEECTTTTTCSCCCEEEEEECH------HHHHHHHTCCCSCSTTCHHHHHHHHHHHHTT
T ss_pred c-CCcc-----ccccccCCCEEEecchhhcCCCCceEEEEECH------HHHHhhhcCCCCceeecHHHHHHHHHhhhcc
Confidence 6 6321 1122 689999999999988887 9999987 5554443210 0 01
Q ss_pred ---CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC-CCc-eEEEccCCCCCcHHHHH
Q 009673 348 ---LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS-DNH-LVLVDLRPMGIDGARVE 422 (529)
Q Consensus 348 ---~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt-~~~-~~~v~~~~~~i~~~~~~ 422 (529)
+.++++...++++.++++.+...++++..++..++++++.+.|++.|++++.+.. ..+ +..+... +. .....
T Consensus 246 ~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~--~~-~~~~~ 322 (379)
T 3ke3_A 246 GHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTE--RD-DMHKG 322 (379)
T ss_dssp SCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECS--CH-HHHSS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEccC--Cc-chHHH
Confidence 2357888889999889887765557888899999999999999999998875421 122 2222221 11 11225
Q ss_pred HhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 423 KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 423 ~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
+.|.++||.+..+..|....+...+.|||+++..++ ++|++++++.|+++++.
T Consensus 323 ~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t----~~di~~~~~~l~~~l~~ 375 (379)
T 3ke3_A 323 SAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDK----LTDIDGTVERFEKALDE 375 (379)
T ss_dssp HHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHH----HTCHHHHHHHHHHHHHH
T ss_pred HHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCC----HHHHHHHHHHHHHHHHH
Confidence 678889998865432211113346789999876554 79999999999988764
No 87
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.93 E-value=2.8e-25 Score=236.63 Aligned_cols=293 Identities=13% Similarity=0.133 Sum_probs=207.3
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCE---EEEcCCCCCccccccccccccccccccceE---E
Q 009673 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDR---IMGLDLPHGGHLSHGFMTPKRRVSGTSIYF---E 225 (529)
Q Consensus 153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~---Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~---~ 225 (529)
+++++++++|++++ +|.+++|+ +++..++.++++|||. |++.++.|.+.... +. ..+...|... .
T Consensus 116 l~~~la~~~g~~~~----~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~-~~---~~~~~~G~~~~~~~ 187 (465)
T 3e9k_A 116 IVGLMKDIVGANEK----EIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYA-IE---SQLQLHGLNIEESM 187 (465)
T ss_dssp HHGGGHHHHTCCGG----GEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHH-HH---HHHHHTTCCHHHHE
T ss_pred HHHHHHHHcCCCcC----CEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHH-HH---HHHHHcCCcceeee
Confidence 45889999999865 34445555 8899899999887765 99999988653210 00 0112233311 1
Q ss_pred EEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCC
Q 009673 226 SMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP 301 (529)
Q Consensus 226 ~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~ 301 (529)
+...+.+ +++.+|+++|+++++++ ++++|++++++|++ ..|+++|.++|++||+++++|++|+.|.+..+....
T Consensus 188 v~~~~~~-~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~- 265 (465)
T 3e9k_A 188 RMIKPRE-GEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDW- 265 (465)
T ss_dssp EEECCCT-TCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH-
T ss_pred EEEecCC-CCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhc-
Confidence 1222333 45789999999999732 68899999888876 789999999999999999999999887653322111
Q ss_pred CCcccEEEecccccc-cCCCC-eEEEeeCCCcchhHHHhhhcccc------------------------cCCCCCCChHH
Q 009673 302 FKYCDVVTTTTHKSL-RGPRG-GMIFFKKDPVLGVELESAINNAV------------------------FPGLQGGPHNH 355 (529)
Q Consensus 302 ~~~aDiv~~S~hK~l-~Gprg-G~i~~~~~~~~~~~l~~~i~~~~------------------------~p~~~g~p~~~ 355 (529)
++|++++|+||++ .||.+ |+++++++ +.+.+.... .....|+|+..
T Consensus 266 --~~D~~~~s~~K~l~~gp~~~g~l~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 337 (465)
T 3e9k_A 266 --GVDFACWCSYKYLNAGAGGIAGAFIHEK------HAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPIL 337 (465)
T ss_dssp --TCCEEEECSSSTTCCCTTCCCEEEECGG------GTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHH
T ss_pred --CCCEEEECcccccccCCCceEEEEEcHH------HHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHH
Confidence 5899999999999 48887 99999873 332222110 00113578888
Q ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-----------cCcEEecCCC---CCceEEEccCCCCCcHHHH
Q 009673 356 TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-----------LGYKLVSGGS---DNHLVLVDLRPMGIDGARV 421 (529)
Q Consensus 356 ~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-----------~G~~v~~~gt---~~~~~~v~~~~~~i~~~~~ 421 (529)
.++++.++++.+...++++..++..++++++.+.|++ .|++++.+.. ...++++.+. .+..++
T Consensus 338 ~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~---~~~~~l 414 (465)
T 3e9k_A 338 LVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFS---VPNKDV 414 (465)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEEC---CTTCCH
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEec---CCHHHH
Confidence 8988888888765445688889999999999999988 6888876421 1344555554 234567
Q ss_pred HHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc-CCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 422 EKILDMASITLNKNSVPGDKSALVPGGIRIGS-PAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 422 ~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~-~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
.+.|.+.||.+... .++.|||+. +.++ +++|++++++.|++++..
T Consensus 415 ~~~L~~~Gi~v~~~---------~~~~iRis~~~~~~----t~edi~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 415 FQELEKRGVVCDKR---------NPNGIRVAPVPLYN----SFHDVYKFTNLLTSILDS 460 (465)
T ss_dssp HHHHHTTTEECEEE---------TTTEEEEBCCTTTC----CHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHCCEEEecC---------CCCEEEEeCcccCC----CHHHHHHHHHHHHHHHHh
Confidence 78888889998521 257999997 5554 489999999999988753
No 88
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.93 E-value=5.6e-24 Score=218.52 Aligned_cols=315 Identities=15% Similarity=0.131 Sum_probs=218.4
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhcc--CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC-h
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNK--YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-G 177 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~--y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s-G 177 (529)
+.|+|..+++. +++.|++++...+.+. ...+|+.. ...+++ +++++++|++++ +|.+++ |
T Consensus 27 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~-------~~~~lr----~~la~~~g~~~~----~i~~t~g~ 91 (360)
T 3hdo_A 27 SWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSA-------SSQKLR----EVAGELYGFDPS----WIIMANGS 91 (360)
T ss_dssp TSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCS-------SCHHHH----HHHHHHHTCCGG----GEEEESSH
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCC-------chHHHH----HHHHHHhCcCcc----eEEEcCCH
Confidence 56888888874 5899999998887543 01234321 113444 677888898765 333455 4
Q ss_pred HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 009673 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 257 (529)
Q Consensus 178 s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~ 257 (529)
++|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++. ++.+ ++++ +..++++|++
T Consensus 92 ~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~-~~~~--~~l~---~~~~~~~v~i 155 (360)
T 3hdo_A 92 DEVLNNLIRAFAAEGEEIGYVHPSYSYYGT--------LAEVQGA--RVRTFGLTG-DFRI--AGFP---ERYEGKVFFL 155 (360)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESSSCTHHHH--------HHHHHTC--EEEEECBCT-TSSB--TTCC---SSBCSSEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEcCCChHHHHH--------HHHHCCC--EEEEeeCCC-CCCH--HHHH---hhcCCCEEEE
Confidence 599999999999999999999988765421 2334454 667777753 3444 4443 3236789999
Q ss_pred cCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCC-C--cccEEEecccccc--cCCCCeEEEeeCCC
Q 009673 258 GASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K--YCDVVTTTTHKSL--RGPRGGMIFFKKDP 330 (529)
Q Consensus 258 ~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~--~aDiv~~S~hK~l--~GprgG~i~~~~~~ 330 (529)
+.++||+ ..|.+++.++|+++|+++|+|++|.. +. +....++ . ..+++++|+||++ +|+|.|++++++
T Consensus 156 ~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~-~~--~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-- 230 (360)
T 3hdo_A 156 TTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAE-FA--ESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARP-- 230 (360)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGG-GS--SCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCH--
T ss_pred eCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHh-hC--CcchhHHhccCCCEEEEecchHhhcCCccceeeEeeCH--
Confidence 8888876 78999999999999999999999753 21 1111111 1 2348889999996 678889999976
Q ss_pred cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEc
Q 009673 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD 410 (529)
Q Consensus 331 ~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~ 410 (529)
++.+.+.....+ .+++....+++..+++. ...+++..+++.++++.+.+.|++.|+.+..+ ...++++.
T Consensus 231 ----~~~~~~~~~~~~---~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~ 299 (360)
T 3hdo_A 231 ----EVIAALDKIRDH---YNLDRLAQAACVAALRD--QAYLSECCRRIRETREWFTTELRSIGYDVIPS--QGNYLFAT 299 (360)
T ss_dssp ----HHHHHHHHHSCS---CCSCHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHTTCEECCC--SSSEEEEE
T ss_pred ----HHHHHHHHhCCC---CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEcCC--CccEEEEE
Confidence 777777654332 23344455555556653 23357888889999999999999888887653 24556665
Q ss_pred cCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 411 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 411 ~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+. +.+..++.+.|.++||.+... .. +..++++||++. +++|++++++.|+++.+
T Consensus 300 ~~--~~~~~~l~~~l~~~gi~v~~~----~~-~~~~~~iRis~~-------~~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 300 PP--DRDGKRVYDGLYARKVLVRHF----SD-PLLAHGMRISIG-------TREEMEQTLAALKEIGE 353 (360)
T ss_dssp CT--TCCHHHHHHHHHHTTEECBCC----CS-TTTTTSEEEECC-------CHHHHHHHHHHHHHHHC
T ss_pred CC--CCCHHHHHHHHHHCCEEEEEC----CC-CCCCCEEEEEcC-------CHHHHHHHHHHHHHHhc
Confidence 54 457788888999999999643 21 223578999964 47999999999987654
No 89
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.93 E-value=2.4e-24 Score=225.86 Aligned_cols=349 Identities=12% Similarity=0.143 Sum_probs=221.0
Q ss_pred ccCChHHHHHHHHHHHHh-----hcceeEecCC------C-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHH
Q 009673 84 GEADPEVCEIITKEKERQ-----FKSLELIASE------N-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELET 151 (529)
Q Consensus 84 ~~~d~~~~~~~~~e~~~~-----~~~i~L~ase------n-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~ 151 (529)
...++.++.+..+..... .+.|+|..++ + ++++.|.+++....... ..+|+. ..| ..++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~---~~g---~~~lr~ 87 (418)
T 3rq1_A 15 KKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSE-HVGYAP---IAG---IPDFLC 87 (418)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHH-HHSCCC---TTC---CHHHHH
T ss_pred CCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhcccc-cCCCCC---CCC---hHHHHH
Confidence 344445566554433322 2568887764 2 46889999987654321 112322 112 235555
Q ss_pred HHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcc
Q 009673 152 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (529)
Q Consensus 152 ~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~ 230 (529)
...+++....+.+.. .+|.+++|+ +|+..++.++++|||+|++++|.|.++.. .+...|. +++.++
T Consensus 88 ~ia~~~~~~~~~~~~---~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~v~ 154 (418)
T 3rq1_A 88 AAEKECFGNFRPEGH---IRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRV--------ICSDTGR--TLVTYS 154 (418)
T ss_dssp HHHHHHHGGGCCSSE---EEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHH--------HHHHTTC--EEEEEC
T ss_pred HHHHHHhcccCcccc---ccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHH--------HHHHcCC--EEEEEe
Confidence 555666555554421 245566766 99999999999999999999998765431 2344555 677777
Q ss_pred cCCCCCCCCHHHHHHHhhhc---CCc-EEEEcCC-CCCC--CCCHH---HHHHHHH------HhCCEEEEeccccccccc
Q 009673 231 LDESTGLVDYDMLEKTAILF---RPK-LIIAGAS-AYPR--DFDYP---RMRQIAD------AVGALLMMDMAHISGLVA 294 (529)
Q Consensus 231 v~~~~~~iD~d~le~~i~~~---~pk-lIi~~~s-~~p~--~~d~~---~i~~ia~------~~g~~livD~ah~~Gli~ 294 (529)
++++++.+|+++|++.+++. +++ +|++++| +||+ ..+.+ +|+++|+ +||++||+|++| .++..
T Consensus 155 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y-~~~~~ 233 (418)
T 3rq1_A 155 LFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAY-LDYSG 233 (418)
T ss_dssp SBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTT-GGGSS
T ss_pred eeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccc-ccccC
Confidence 75556799999999999753 666 7888888 8886 55654 5556666 899999999996 45443
Q ss_pred ccccCCC----CC--ccc---EEEecccccc--cCCCCeEEEe---eCCCcchhHHHhhhcccccC---CCCCCChHHHH
Q 009673 295 ASVVADP----FK--YCD---VVTTTTHKSL--RGPRGGMIFF---KKDPVLGVELESAINNAVFP---GLQGGPHNHTI 357 (529)
Q Consensus 295 ~~~~~~~----~~--~aD---iv~~S~hK~l--~GprgG~i~~---~~~~~~~~~l~~~i~~~~~p---~~~g~p~~~~i 357 (529)
.+....+ .. ..| ++++|+||++ +|+|.||+++ ++ ++.+.+...... +...+++....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (418)
T 3rq1_A 234 EKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDE------EIADEFFEVNKSTSRATWSNICRPAM 307 (418)
T ss_dssp CHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSH------HHHHHHHHHHHHHHHHHTSSCCHHHH
T ss_pred ChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCH------HHHHHHHHHHHHHHhhccCCCchHHH
Confidence 3211101 11 123 7889999986 6889999998 55 666655432110 00122233333
Q ss_pred HHHHHHHHHhc-----CchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEE
Q 009673 358 GGLAVCLKHAQ-----SPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITL 432 (529)
Q Consensus 358 aala~al~~~~-----~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v 432 (529)
+++..+++... ....+++.+++.++++.+.+.|.+.|+++..+. .+++.|+++. +..++.+.|.++||.+
T Consensus 308 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~----~~~~~~~~l~~~gi~v 382 (418)
T 3rq1_A 308 RTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVGLPMLPYR-GGFFITIPTD----SANAICEELKKEHIYV 382 (418)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC-SSSEEEEECT----THHHHHHHHHHTTEEC
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-ceEEEEcCCC----CHHHHHHHHHhCCEEE
Confidence 33333332110 011234567778888899999988888876542 3455666653 5677888899999998
Q ss_pred cCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 433 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 433 ~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
. || ++++||++.. .++++++++++.|+++++.
T Consensus 383 ~----~g------~~~iRis~~~-----~~~~~i~~~~~~l~~~l~~ 414 (418)
T 3rq1_A 383 I----AL------ANGIRIAACG-----IPKCQMTGLAEKIYNAMKS 414 (418)
T ss_dssp E----EC------SSEEEEEGGG-----SCHHHHTTHHHHHHHHHHH
T ss_pred e----cC------CCCeEEEEec-----CCHHHHHHHHHHHHHHHHH
Confidence 4 43 4689999532 4689999999999988764
No 90
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.93 E-value=6.4e-25 Score=227.85 Aligned_cols=322 Identities=10% Similarity=0.036 Sum_probs=209.4
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHH-HHHcCCCCCCCceeeecCChHHHHHHHHHhh-cC
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA-LAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LK 190 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~l-a~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~ 190 (529)
.+++.+++++...+.+.+ |+...+..+++| +.+ ++++|... -.|.++||++|+..++.++ ++
T Consensus 13 ~~~~~i~~a~~~~~~~~~--------~~~~~~~~~~l~----~~~~a~~~g~~~----~~v~~~sgt~al~~al~~l~~~ 76 (377)
T 3ju7_A 13 VPVIEYLDELKEIDASHI--------YTNYGPINQRFE----QTIMSGFFQNRG----AVTTVANATLGLMAAIQLKKRK 76 (377)
T ss_dssp CCGGGGHHHHHHHHHHTC--------CSSSCHHHHHHH----HHHHHHTSTTCS----EEEEESCHHHHHHHHHHHHSCT
T ss_pred CCcHHHHHHHHHHHHcCC--------cccCCHHHHHHH----HHHHHHHhCCCC----eEEEeCCHHHHHHHHHHHcCCC
Confidence 457888899888876543 111124456666 667 88999322 1466789999999999998 99
Q ss_pred CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHh-hhcC--CcEEEEcCCCCCCCCC
Q 009673 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTA-ILFR--PKLIIAGASAYPRDFD 267 (529)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i-~~~~--pklIi~~~s~~p~~~d 267 (529)
|||+|+++++.|.+... .+...|. +++.++++++++.+|++++++++ ++ + +|+|+.+++ ++...|
T Consensus 77 ~Gd~Vi~~~~~~~~~~~--------~~~~~G~--~~~~v~~~~~~~~~d~~~l~~~i~~~-~~~tk~v~~~~~-~G~~~~ 144 (377)
T 3ju7_A 77 KGKYALMPSFTFPATPL--------AAIWCGL--EPYFIDISIDDWYMDKTVLWDKIEEL-KEEVAIVVPYAT-FGSWMN 144 (377)
T ss_dssp TCCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCSBCHHHHHHHHHHH-GGGEEEECCBCG-GGBCCC
T ss_pred CcCEEEECCCCcHHHHH--------HHHHcCC--EEEEEecCCccCCcCHHHHHHHHhcC-CCCceEEEEECC-CCCccC
Confidence 99999999998765431 2344564 77788887678899999999988 44 6 888875432 345789
Q ss_pred HHHHHHHHHHhCCEEEEecccccccccccccC-CCCCcccEEEec--ccccccCCCCeEEEeeCCCcchhHHHhhhcccc
Q 009673 268 YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPFKYCDVVTTT--THKSLRGPRGGMIFFKKDPVLGVELESAINNAV 344 (529)
Q Consensus 268 ~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~-~~~~~aDiv~~S--~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~ 344 (529)
+++|.++|+ +|++||+|++|..|....+... .. .+|+.++| .||+++++.||+++++++ ++.++++...
T Consensus 145 ~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~--~~d~~~~S~~~~K~l~~g~gG~~~~~~~-----~l~~~~~~~~ 216 (377)
T 3ju7_A 145 LEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQD--FSGMIIYSFHATKPFGIGEGGLIYSKNE-----EDIQRIKRMG 216 (377)
T ss_dssp CHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTT--CSSEEEEECBTTSSSCCBSCEEEEESCH-----HHHHHHHHHT
T ss_pred HHHHHHHHh-cCCEEEEECCCccCCeECCEeccCC--CCcEEEEECCCCCcCCCCCcEEEEECCH-----HHHHHHHHHH
Confidence 999999999 9999999999988865433221 11 24555554 679998788899998874 5666554332
Q ss_pred cCCC--------CC-CChH-HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC---cEEecCCC--CCce-EE
Q 009673 345 FPGL--------QG-GPHN-HTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG---YKLVSGGS--DNHL-VL 408 (529)
Q Consensus 345 ~p~~--------~g-~p~~-~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G---~~v~~~gt--~~~~-~~ 408 (529)
..+. .| +... ...+++ ++..+ ..++.+.++..++++.+.+.|.+.+ +.+..... ..+. +.
T Consensus 217 ~~g~~~~~~~~~~g~~~~~~~~~aa~--~~~~l--~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 292 (377)
T 3ju7_A 217 NFGFDTNRECTMMGFNCKMSEYAAAI--GIATM--KKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMP 292 (377)
T ss_dssp BTTBCTTSCBCSSCCBCCCCHHHHHH--HHHHH--HTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEE
T ss_pred hcCCCCCCceeeccccCCCCHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEE
Confidence 2211 01 0111 112222 22222 3456778888899999999998854 22222211 2222 23
Q ss_pred EccCCCCCcHHHHHHhHhcCCeEEcCCC-CCCCCC-CC--------------CCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673 409 VDLRPMGIDGARVEKILDMASITLNKNS-VPGDKS-AL--------------VPGGIRIGSPAMTTRGFSEKEFVAIADF 472 (529)
Q Consensus 409 v~~~~~~i~~~~~~~~L~~~GI~v~~~~-~Pg~~~-~~--------------~~~~iRig~~~~tt~g~~~~d~~~la~~ 472 (529)
+.+. .+.+.+.+.+.|.++||.++..+ .|.+.. .+ ....||+.+.. .++++|++++++.
T Consensus 293 ~~~~-~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~----~~t~~di~~v~~~ 367 (377)
T 3ju7_A 293 ILCP-EEVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWE----GMTKEIVEQIVIC 367 (377)
T ss_dssp EECC-TTSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCT----TCCHHHHHHHHHH
T ss_pred EEeC-ChhhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCC----CCCHHHHHHHHHH
Confidence 3332 23357889999999999998765 232221 11 02358887643 4679999999999
Q ss_pred HHHHHHH
Q 009673 473 IHEGVEI 479 (529)
Q Consensus 473 i~~~~~~ 479 (529)
|.+++..
T Consensus 368 l~~~~~~ 374 (377)
T 3ju7_A 368 LGQKVVS 374 (377)
T ss_dssp HTC----
T ss_pred HHHHHhc
Confidence 9887764
No 91
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.93 E-value=4.1e-24 Score=223.45 Aligned_cols=325 Identities=14% Similarity=0.116 Sum_probs=219.5
Q ss_pred ceeEecCC-CCCcHHHHHHHhhhhhccCCCCCCCC--CCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 009673 104 SLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGK--RYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (529)
Q Consensus 104 ~i~L~ase-n~~~~~V~eal~~~l~~~y~~G~p~~--r~~~g-~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~ 179 (529)
.+.|..+. .+.|+.|++++...+.+.|. ++.. ++..+ .+... .+++++++++|++++++ +..++|++
T Consensus 29 ~~yld~~~~~~~~~~v~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~~----~l~~~la~~~g~~~~~v---~~~~g~t~ 99 (416)
T 1qz9_A 29 VIYLDGNSLGARPVAALARAQAVIAEEWG--NGLIRSWNSAGWRDLSE----RLGNRLATLIGARDGEV---VVTDTTSI 99 (416)
T ss_dssp CEECCTTTSCCCBTTHHHHHHHHHHTCCC--CCGGGHHHHTSGGGHHH----HHHHHHHTTTTCCTTSE---EECSCHHH
T ss_pred eEeecCCCcCCCcHHHHHHHHHHHHHHHh--ccCccccchhhHHHHHH----HHHHHHHHHcCCCcccE---EEeCChhH
Confidence 45565444 36788999999888765442 2211 11111 12223 34588999999976431 22344558
Q ss_pred HHHHHHHhhc------CCCCEEEEc-CCCCCccccccccccccccccc--cceEEEEEcccCCCCCCCCHHHHHHHhhhc
Q 009673 180 ANFEVYTAIL------KPHDRIMGL-DLPHGGHLSHGFMTPKRRVSGT--SIYFESMPYRLDESTGLVDYDMLEKTAILF 250 (529)
Q Consensus 180 A~~~~l~all------~pGD~Vl~~-~~~~~g~~s~g~~~~~~~i~~~--g~~~~~v~~~v~~~~~~iD~d~le~~i~~~ 250 (529)
++..++.+++ +|||+|++. .+.|+++...... ..... |. +++.+++ +++|++.+++
T Consensus 100 al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~----~~~~~~~g~--~~~~v~~--------~~~l~~~i~~- 164 (416)
T 1qz9_A 100 NLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEG----LADMLQQGY--TLRLVDS--------PEELPQAIDQ- 164 (416)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHH----HHHHHCSSC--EEEEESS--------GGGHHHHCST-
T ss_pred HHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHH----HHHHhcCCc--eEEEeCc--------HHHHHHHhCC-
Confidence 8877888776 899975554 4455543211000 00111 43 5555543 6788888877
Q ss_pred CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccc-cCCCC-eEE
Q 009673 251 RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL-RGPRG-GMI 324 (529)
Q Consensus 251 ~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l-~Gprg-G~i 324 (529)
++++|++++++||+ ..|+++|.++|+++|+++|+|++|..|.... .+. ++|++++|+||++ +|+++ |++
T Consensus 165 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~-----~~~~~~~d~~~~s~~K~l~~g~~~~g~l 239 (416)
T 1qz9_A 165 DTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPV-----DLHQAGADYAIGCTYKYLNGGPGSQAFV 239 (416)
T ss_dssp TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCC-----CHHHHTCSEEEECSSSTTCCCTTCCCEE
T ss_pred CceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCC-----ChhhcCCCEEEecCcccCCCCCCCeEEE
Confidence 89999999888775 7899999999999999999999987664321 121 4799999999997 57888 999
Q ss_pred EeeCCCcchhHHHhhhccccc----------------------CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673 325 FFKKDPVLGVELESAINNAVF----------------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (529)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~----------------------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~ 382 (529)
++++ ++.+.+..... ....++++...++++..+++.....++++..+++.++
T Consensus 240 ~~~~------~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~ 313 (416)
T 1qz9_A 240 WVSP------QLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLAL 313 (416)
T ss_dssp EECT------TTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred EECH------HHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 9988 34443332110 0123567777888877788877655678889999999
Q ss_pred HHHHHHHHHhc----CcEEecCCC---CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCC
Q 009673 383 CRALASRLVEL----GYKLVSGGS---DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPA 455 (529)
Q Consensus 383 a~~l~~~L~~~----G~~v~~~gt---~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~ 455 (529)
++++.+.|.+. |+.+..+.. ..+++++.+. +..++.+.|.++||.+... .++.+||+++.
T Consensus 314 ~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~l~~~gi~~~~~---------~~~~lRis~~~ 380 (416)
T 1qz9_A 314 TDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHP----EGYAVIQALIDRGVIGDYR---------EPRIMRFGFTP 380 (416)
T ss_dssp HHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECT----THHHHHHHHHTTTEECEEE---------TTTEEEEECCT
T ss_pred HHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecC----CHHHHHHHHHhCCcEeccC---------CCCeEEEeCcc
Confidence 99999999885 898876421 2355666654 2567888888889987421 25789999763
Q ss_pred CccCCCCHHHHHHHHHHHHHHHHH
Q 009673 456 MTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 456 ~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
+. .+++|++++++.|+++++.
T Consensus 381 ~~---~t~~~i~~~~~~l~~~~~~ 401 (416)
T 1qz9_A 381 LY---TTFTEVWDAVQILGEILDR 401 (416)
T ss_dssp TT---CCHHHHHHHHHHHHHHHHH
T ss_pred cC---CCHHHHHHHHHHHHHHHhc
Confidence 11 3589999999999988753
No 92
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.93 E-value=4.9e-24 Score=226.17 Aligned_cols=340 Identities=12% Similarity=0.027 Sum_probs=221.7
Q ss_pred hcceeEecCCC----CCcHHHHHHHhhhhhccC--CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeec
Q 009673 102 FKSLELIASEN----FTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQP 174 (529)
Q Consensus 102 ~~~i~L~asen----~~~~~V~eal~~~l~~~y--~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~ 174 (529)
.+.|+|..+.. ++++.+.+++...+.+.. ..+|+. .....++++...+++.+.+|++ ++ +|.+
T Consensus 76 ~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~------~~g~~~lr~~ia~~~~~~~g~~~~~----~v~~ 145 (448)
T 3aow_A 76 SDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGT------TKGFTPLRETLMKWLGKRYGISQDN----DIMI 145 (448)
T ss_dssp SSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCC------TTCCHHHHHHHHHHHHHHHCCCTTS----EEEE
T ss_pred CCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCC------CCCcHHHHHHHHHHHHHhcCcCChh----hEEE
Confidence 45688865542 256788988887765321 112322 1113456655556666677984 32 4555
Q ss_pred CChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhh----h
Q 009673 175 LSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI----L 249 (529)
Q Consensus 175 ~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~----~ 249 (529)
++|+ +|+..++.++++|||+|++.+|.|.++.. .+...|. +++.+++++ + .+|+++|++.++ +
T Consensus 146 t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~-~-g~d~~~L~~~l~~~~~~ 213 (448)
T 3aow_A 146 TSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQ--------AFNFYEP--QYIQIPLDD-E-GMKVEILEEKLKELKSQ 213 (448)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTCC--EEEEEEEET-T-EECHHHHHHHHHHHHHT
T ss_pred eCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCC--EEEEeccCC-C-CCCHHHHHHHHhhhhcc
Confidence 6665 99999999999999999999998755421 2334454 666666664 3 399999999987 3
Q ss_pred -cCCcEEE-EcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---C--cccEEEecccccc-
Q 009673 250 -FRPKLII-AGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHKSL- 316 (529)
Q Consensus 250 -~~pklIi-~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~--~aDiv~~S~hK~l- 316 (529)
.++++|+ +..++||+ ..+ +++|.++|++||++||+|++|..+ ...+....++ + +.++++.|++|++
T Consensus 214 ~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~-~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~ 292 (448)
T 3aow_A 214 GKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGEL-RYSGNPEKKIKALDNEGRVIYLGTFSKILA 292 (448)
T ss_dssp TCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTC-BCSSCCCCCTGGGCTTSCEEEEEESTTTTC
T ss_pred CCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccc-cCCCCCCcCHHhcCCCCCEEEEccchhhcc
Confidence 2788875 56778876 444 678999999999999999996543 3322211122 1 3468899999998
Q ss_pred cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHHHhc--
Q 009673 317 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRALASRLVEL-- 393 (529)
Q Consensus 317 ~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-~~~~~~~~~~i~~~a~~l~~~L~~~-- 393 (529)
+|+|.||+++++ ++.+++.........+++.. ..+++..+|+... ....++..+++.++++.+.+.|++.
T Consensus 293 ~GlriG~v~~~~------~l~~~l~~~~~~~~~~~~~~-~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 365 (448)
T 3aow_A 293 PGFRIGWMVGDP------GIIRKMEIAKQSTDLCTNVF-GQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMP 365 (448)
T ss_dssp GGGCCEEEEECH------HHHHHHHHHHHHHHSSCCHH-HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ccccEEEEEeCH------HHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 467889999987 67766654322222233333 3333344554310 1223556677778899999999874
Q ss_pred -CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673 394 -GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 472 (529)
Q Consensus 394 -G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~ 472 (529)
|+.+..+. ...++|+++. .+++..++.+.|.+.||.+..+...+. ....++++||++... +++++++.++.
T Consensus 366 ~g~~~~~p~-~g~~~~v~~~-~~~~~~~l~~~l~~~gV~v~pg~~f~~-~~~~~~~iRls~~~~-----~~e~i~~~~~~ 437 (448)
T 3aow_A 366 EGVKWTKPE-GGMFIWVTLP-DGIDSKKMLERAIKKGVAYVPGEAFYA-HRDVKNTMRLNFTYV-----DEDKIMEGIKR 437 (448)
T ss_dssp TTCEECCCS-BSSEEEEECS-TTCCHHHHHHHHHHTTEECEEGGGGST-TCCCCSEEEEECSSS-----CTHHHHHHHHH
T ss_pred CCeEEeCCC-ccEEEEEEcC-CCCCHHHHHHHHHHCCcEEEcchhhcC-CCCCCCEEEEEeCCC-----CHHHHHHHHHH
Confidence 78876542 3456788875 355677777777777999854321111 112357899997542 47999999999
Q ss_pred HHHHHHH
Q 009673 473 IHEGVEI 479 (529)
Q Consensus 473 i~~~~~~ 479 (529)
|.++++.
T Consensus 438 L~~~l~~ 444 (448)
T 3aow_A 438 LAETIKE 444 (448)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988764
No 93
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.93 E-value=1.1e-23 Score=219.67 Aligned_cols=342 Identities=16% Similarity=0.045 Sum_probs=220.0
Q ss_pred cceeEecCCC----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673 103 KSLELIASEN----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (529)
Q Consensus 103 ~~i~L~asen----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs 178 (529)
+.|+|..+.. +.++.+.+++...+.+.... .. |+......++++...+++.+.+|.+.+. .+|.+++|+
T Consensus 35 ~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~----~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~--~~v~~t~g~ 107 (407)
T 2zc0_A 35 KLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKS----VM-YTPANGIPELREELAAFLKKYDHLEVSP--ENIVITIGG 107 (407)
T ss_dssp CCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGG----GS-CCCTTCCHHHHHHHHHHHHHHSCCCCCG--GGEEEESHH
T ss_pred ceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccc----cc-CCCCCCCHHHHHHHHHHHHHhcCCCCCc--ceEEEecCH
Confidence 5678865432 25688999988777532100 00 2111223567766667777777853221 245567774
Q ss_pred -HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhh----h-cCC
Q 009673 179 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI----L-FRP 252 (529)
Q Consensus 179 -~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~----~-~~p 252 (529)
+|+..++.++++|||+|++.+|.|.++. ..+...|. +++.+++++ ++ +|+++|++.++ + .++
T Consensus 108 t~a~~~~~~~~~~~gd~vl~~~p~~~~~~--------~~~~~~g~--~~~~v~~~~-~~-~d~~~l~~~l~~~~~~~~~~ 175 (407)
T 2zc0_A 108 TGALDLLGRVLIDPGDVVITENPSYINTL--------LAFEQLGA--KIEGVPVDN-DG-MRVDLLEEKIKELKAKGQKV 175 (407)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHTTTC--EEEEEEEET-TE-ECHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCChHHHH--------HHHHHcCC--EEEEcccCC-CC-CCHHHHHHHHHhhhcccCCc
Confidence 9999999999999999999998775432 12334554 566666654 33 99999999987 4 267
Q ss_pred cEEE-EcCCCCCC--CCCHH---HHHHHHHHhCCEEEEecccccccccccccCCCC---C--cccEEEeccccccc-CCC
Q 009673 253 KLII-AGASAYPR--DFDYP---RMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHKSLR-GPR 320 (529)
Q Consensus 253 klIi-~~~s~~p~--~~d~~---~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~--~aDiv~~S~hK~l~-Gpr 320 (529)
++|+ ++.++||+ ..+.+ +|.++|++||+++|+|++|..+ ...+....++ . +.+++++|+||+++ |.|
T Consensus 176 ~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r 254 (407)
T 2zc0_A 176 KLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFM-RYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGFR 254 (407)
T ss_dssp EEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTS-BSSCSSCCCGGGGCSSCCEEEEEESTTTTCTTSC
T ss_pred eEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCccc-ccCCCCCCChhhcCCCCCEEEEcccccccCCCcc
Confidence 8874 55677775 56665 8999999999999999997644 3222111111 1 23478899999984 568
Q ss_pred CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-C-chHHHHHHHHHHHHHHHHHHHHhc--CcE
Q 009673 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-S-PEFKVYQNKVVSNCRALASRLVEL--GYK 396 (529)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-~-~~~~~~~~~i~~~a~~l~~~L~~~--G~~ 396 (529)
+|++++++ ++.+.+.....+...+++... .+++..+++... . ..+++..+++.++++.+.+.|++. |+.
T Consensus 255 ~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 327 (407)
T 2zc0_A 255 IGWIIAEG------EILKKVLMQKQPIDFCAPAIS-QYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAE 327 (407)
T ss_dssp CEEEECCH------HHHHHHHHHHTTTTSSSCHHH-HHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred eEEEecCH------HHHHHHHHHHHhhcCCCCHHH-HHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence 89999986 677766554333333333333 333333454320 1 223556777888899999999873 676
Q ss_pred EecCCCCCceEEEccCCCCCcHHHHHHhHhcC-CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 397 LVSGGSDNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 397 v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
+..+. ..+++++++.. +++..++.+.|.+. ||.+..+...+. ....++++||++... +++|++++++.|.+
T Consensus 328 ~~~~~-~~~~~~~~~~~-~~~~~~l~~~l~~~~gi~v~~g~~~~~-~~~~~~~iRis~~~~-----~~~~i~~~~~~l~~ 399 (407)
T 2zc0_A 328 FTKPI-AGMFVMFFLPE-GADGISFANELMEREGVVVVPGKPFYT-DESGKNAIRLNFSRP-----SKEEIPIGIKKLAK 399 (407)
T ss_dssp BCCCS-BSSEEEEECST-TCCHHHHHHHHHHHTCEECBCSGGGCS-SSCCTTEEEEECSSS-----CTTHHHHHHHHHHH
T ss_pred EecCC-CcEEEEEEcCC-CCCHHHHHHHHHHhCCeEEECchhccC-CCCCCCeEEEEeCCC-----CHHHHHHHHHHHHH
Confidence 65432 34567777743 56777777777666 999965421111 011357899997643 46999999999998
Q ss_pred HHHH
Q 009673 476 GVEI 479 (529)
Q Consensus 476 ~~~~ 479 (529)
+++.
T Consensus 400 ~l~~ 403 (407)
T 2zc0_A 400 LYKE 403 (407)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8753
No 94
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.93 E-value=9.7e-25 Score=224.70 Aligned_cols=323 Identities=14% Similarity=0.079 Sum_probs=211.8
Q ss_pred CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-
Q 009673 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI- 188 (529)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al- 188 (529)
+..++++.|++++...+.+.+ .+| .+...+++ +.+++++|.+. .+..++|++|+..++.++
T Consensus 7 ~~~~~~~~v~~a~~~~~~~~~--~~~-------~~~~~~l~----~~la~~~~~~~-----v~~~~ggt~al~~~~~~~~ 68 (375)
T 2fnu_A 7 SEPCLDKEDKKAVLEVLNSKQ--LTQ-------GKRSLLFE----EALCEFLGVKH-----ALVFNSATSALLTLYRNFS 68 (375)
T ss_dssp CCCCCCHHHHHHHHHHHTSSC--CSS-------SHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHSS
T ss_pred CCCCCCHHHHHHHHHHHHcCc--ccC-------ChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHhc
Confidence 567789999999998875432 112 12334444 77888999872 244567779999999999
Q ss_pred --cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCC
Q 009673 189 --LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDF 266 (529)
Q Consensus 189 --l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~ 266 (529)
++|||+|+++++.|.+... .+...|. +++.++++++ +.+|+++|++.+++ ++++|+++.+ .+...
T Consensus 69 ~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~-~~~d~~~l~~~i~~-~~~~v~~~~~-tG~~~ 135 (375)
T 2fnu_A 69 EFSADRNEIITTPISFVATAN--------MLLESGY--TPVFAGIKND-GNIDELALEKLINE-RTKAIVSVDY-AGKSV 135 (375)
T ss_dssp CCCTTSCEEEECSSSCTHHHH--------HHHHTTC--EEEECCBCTT-SSBCGGGSGGGCCT-TEEEEEEECG-GGCCC
T ss_pred ccCCCCCEEEECCCccHhHHH--------HHHHCCC--EEEEeccCCC-CCCCHHHHHhhcCc-CceEEEEeCC-cCCcc
Confidence 8999999999988765432 2333454 7778888744 48999999999877 7898877766 55578
Q ss_pred CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEec--ccccccCCCCeEEEee-CCCcchhHHHhhhcc
Q 009673 267 DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTT--THKSLRGPRGGMIFFK-KDPVLGVELESAINN 342 (529)
Q Consensus 267 d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S--~hK~l~GprgG~i~~~-~~~~~~~~l~~~i~~ 342 (529)
|+++|.++|+++|+++|+|++|..|....+. .+. ..|+++.| .||++ |+..|++++. ++ ++.+++..
T Consensus 136 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~i~~~s~s~~K~~-~~g~g~~~~~~~~-----~~~~~~~~ 206 (375)
T 2fnu_A 136 EVESVQKLCKKHSLSFLSDSSHALGSEYQNK---KVGGFALASVFSFHAIKPI-TTAEGGAVVTNDS-----ELHEKMKL 206 (375)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSS-CCSSCEEEEESCH-----HHHHHHHH
T ss_pred CHHHHHHHHHHcCCEEEEECccccCCeECCe---eccccCCeEEEeCCCCCCc-cccCceEEEeCCH-----HHHHHHHH
Confidence 9999999999999999999999877543221 121 23555555 55998 5523777664 32 45554433
Q ss_pred cccCCC------------CCCC-hHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecC--C--CCC
Q 009673 343 AVFPGL------------QGGP-HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG--G--SDN 404 (529)
Q Consensus 343 ~~~p~~------------~g~p-~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~--g--t~~ 404 (529)
....+. .+.+ ....+.+ +.++... ..+++..++..++++++.+.|++. |+.+..+ + ...
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 283 (375)
T 2fnu_A 207 FRSHGMLKKDFFEGEVKSIGHNFRLNEIQS-ALGLSQL--KKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSN 283 (375)
T ss_dssp HTBTTEEESSSSCEEESSCCCBCCCCHHHH-HHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCC
T ss_pred HHhcCCccccccccccccccccCCCCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcce
Confidence 211110 1110 1112221 1122221 356778888999999999999884 8877653 1 122
Q ss_pred ceEEEccCCCCC-cHHHHHHhHhcCCeEEcCCCCCCCC-CCC--------C-------CCeEEEccCCCccCCCCHHHHH
Q 009673 405 HLVLVDLRPMGI-DGARVEKILDMASITLNKNSVPGDK-SAL--------V-------PGGIRIGSPAMTTRGFSEKEFV 467 (529)
Q Consensus 405 ~~~~v~~~~~~i-~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~--------~-------~~~iRig~~~~tt~g~~~~d~~ 467 (529)
+++++.+...++ +..++.+.|.+.||.+.....|++. ..+ . .+.|||+++.. .+++|++
T Consensus 284 ~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~----~t~~~i~ 359 (375)
T 2fnu_A 284 HLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHAN----LNLESVQ 359 (375)
T ss_dssp SCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTT----CCHHHHH
T ss_pred EEEEEEeCccccchHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCC----CCHHHHH
Confidence 444566643333 5677888888999999743323321 000 1 25799997654 4589999
Q ss_pred HHHHHHHHHHHH
Q 009673 468 AIADFIHEGVEI 479 (529)
Q Consensus 468 ~la~~i~~~~~~ 479 (529)
++++.|+++++.
T Consensus 360 ~~~~~l~~~~~~ 371 (375)
T 2fnu_A 360 NIAHSVLKTFES 371 (375)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988753
No 95
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.93 E-value=1.1e-24 Score=222.11 Aligned_cols=324 Identities=18% Similarity=0.184 Sum_probs=207.2
Q ss_pred ceeEecCCC-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673 104 SLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (529)
Q Consensus 104 ~i~L~asen-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~ 182 (529)
.|+|..+++ ++++.+++++...+... ..|+..+...+++ +++++++|.+. .+.+++|++|+.
T Consensus 5 ~i~~~~~~~~~p~~~~~~a~~~~~~~~--------~~y~~~~~~~~l~----~~la~~~g~~~-----~~~~~~gt~a~~ 67 (347)
T 1jg8_A 5 MIDLRSDTVTKPTEEMRKAMAQAEVGD--------DVYGEDPTINELE----RLAAETFGKEA-----ALFVPSGTMGNQ 67 (347)
T ss_dssp CEECSCGGGCCCCHHHHHHHHTCCCCC--------GGGTCCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHH
T ss_pred EEEeccccCCCCCHHHHHHHhcCCCCC--------cccCCChHHHHHH----HHHHHHhCCce-----EEEecCcHHHHH
Confidence 467776665 46789999986543211 1132334445555 67888999863 356688999999
Q ss_pred HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEE
Q 009673 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIA 257 (529)
Q Consensus 183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~-----~pklIi~ 257 (529)
.++.++++|||+|++++|.|.+.+..+ ..+...|. +++.+ .+ +++.+|+++|++++++. ++++|++
T Consensus 68 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~-----~~~~~~g~--~~~~v-~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~~ 138 (347)
T 1jg8_A 68 VSIMAHTQRGDEVILEADSHIFWYEVG-----AMAVLSGV--MPHPV-PG-KNGAMDPDDVRKAIRPRNIHFPRTSLIAI 138 (347)
T ss_dssp HHHHHHCCTTCEEEEETTCHHHHSSTT-----HHHHHTCC--EEEEE-CE-ETTEECHHHHHHHSCCSCTTSCCEEEEEE
T ss_pred HHHHHhcCCCCEEEEcCcchhhhcccc-----chhhccCe--EEEEe-cC-CCCccCHHHHHHHhccccccccCceEEEE
Confidence 999999999999999998765432111 01223454 55555 33 45778999999999752 5889999
Q ss_pred cCCCCCC---CCC---HHHHHHHHHHhCCEEEEecccccccc-cccccCCCC-CcccEEEecccccccCCCCeEEEeeCC
Q 009673 258 GASAYPR---DFD---YPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (529)
Q Consensus 258 ~~s~~p~---~~d---~~~i~~ia~~~g~~livD~ah~~Gli-~~~~~~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~ 329 (529)
++++||+ ..+ +++|.++|+++|++|++|++|..+.. ..+....++ .++|.+++|+||++++|.||+++.++
T Consensus 139 ~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~- 217 (347)
T 1jg8_A 139 ENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDR- 217 (347)
T ss_dssp ESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECH-
T ss_pred eccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCceEEEEcCH-
Confidence 8888764 343 67889999999999999998754321 112111111 15788888999999877666676665
Q ss_pred CcchhHHHhhhcccc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceE
Q 009673 330 PVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 407 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~ 407 (529)
++.+++.... +.+..........++ ..+++... .. .++..++++.+.+.|++.|+.+.......+++
T Consensus 218 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~-~~----~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 286 (347)
T 1jg8_A 218 -----DFIERARKARKMLGGGMRQAGVLAAAG-IIALTKMV-DR----LKEDHENARFLALKLKEIGYSVNPEDVKTNMV 286 (347)
T ss_dssp -----HHHHHHHHHHHHHTCCCSSTHHHHHHH-HHHHHHSS-TT----HHHHHHHHHHHHHHHHHHTCBCCGGGCCSSEE
T ss_pred -----HHHHHHHHHHHHcCCchhHHHHHHHHH-HHHHHHHH-HH----HHHHHHHHHHHHHHHHhcCceeccCCCcceEE
Confidence 5655443211 111111111122222 23455432 12 23344677888899987777653211234567
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
++++...+.+..++.+.|.+.||.+.. + ..+.+||+++.. .+++|++++++.|+++++
T Consensus 287 ~~~~~~~~~~~~~~~~~l~~~gi~v~~----~-----~~~~iRl~~~~~----~~~e~i~~~~~~l~~~l~ 344 (347)
T 1jg8_A 287 ILRTDNLKVNAHGFIEALRNSGVLANA----V-----SDTEIRLVTHKD----VSRNDIEEALNIFEKLFR 344 (347)
T ss_dssp EEECTTSSSCHHHHHHHHHHHTEECEE----E-----ETTEEEEECCTT----SCHHHHHHHHHHHHHHHH
T ss_pred EEEcccccCCHHHHHHHHHHCCCEEec----C-----CCCeEEEEeCCC----CCHHHHHHHHHHHHHHHH
Confidence 777753345677888888889999853 2 246899987532 468999999999988764
No 96
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.93 E-value=2.6e-24 Score=223.28 Aligned_cols=330 Identities=14% Similarity=0.126 Sum_probs=219.0
Q ss_pred ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (529)
Q Consensus 104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~ 183 (529)
.|++.. ...|+.+++++...+.+.+ ++ ..+...+++ +.+++++|.+. .+.+++|++|+..
T Consensus 10 ~i~~~~--p~~~~~~~~a~~~~~~~~~--------~~-~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~al~~ 69 (393)
T 1mdo_A 10 FLPFSR--PAMGAEELAAVKTVLDSGW--------IT-TGPKNQELE----AAFCRLTGNQY-----AVAVSSATAGMHI 69 (393)
T ss_dssp CBCSCC--CCCCHHHHHHHHHHHHHTC--------CS-SSHHHHHHH----HHHHHHHCCSE-----EEEESCHHHHHHH
T ss_pred ccccCC--CCCCHHHHHHHHHHHhcCC--------cC-CChHHHHHH----HHHHHHhCCCc-----EEEecChHHHHHH
Confidence 455543 4467889999988876432 11 123344554 67888898862 2556778899999
Q ss_pred HHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673 184 VYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (529)
Q Consensus 184 ~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~ 262 (529)
++.++ ++|||+|+++++.|.+... .+...|. +++.++++++++.+|+++|++.+++ ++++|+++++ .
T Consensus 70 ~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~-~ 137 (393)
T 1mdo_A 70 ALMALGIGEGDEVITPSMTWVSTLN--------MIVLLGA--NPVMVDVDRDTLMVTPEHIEAAITP-QTKAIIPVHY-A 137 (393)
T ss_dssp HHHHTTCCTTCEEEEESSSCHHHHH--------HHHHTTC--EEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCBCG-G
T ss_pred HHHHcCCCCCCEEEeCCCccHhHHH--------HHHHCCC--EEEEEeccCCcCCCCHHHHHHhcCC-CceEEEEeCC-C
Confidence 99999 9999999999998765431 2334554 6777777765678999999999987 7898887642 3
Q ss_pred CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccc--ccccCCCCeEEEeeCCCcchhHHHhhh
Q 009673 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAI 340 (529)
Q Consensus 263 p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i 340 (529)
+...|+++|.++|+++|+++|+|++|..|....+. +... .|++++|+| |+++|+++|+++++++ ++.+++
T Consensus 138 G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~-~~~~--~d~~~~S~~k~K~l~~~~~g~~~~~~~-----~~~~~l 209 (393)
T 1mdo_A 138 GAPADLDAIYALGERYGIPVIEDAAHATGTSYKGR-HIGA--RGTAIFSFHAIKNITCAEGGIVVTDNP-----QFADKL 209 (393)
T ss_dssp GCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTE-ETTS--SSEEEEECCTTSSSCSSSCEEEEESCH-----HHHHHH
T ss_pred CCcCCHHHHHHHHHHcCCeEEEECccccCCeECCe-ecCC--CCeEEEeCCCCCccccccceEEEeCCH-----HHHHHH
Confidence 34679999999999999999999998877654321 1111 799999999 9998889999999742 455544
Q ss_pred cccccCC--------------------CCCC-ChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec
Q 009673 341 NNAVFPG--------------------LQGG-PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (529)
Q Consensus 341 ~~~~~p~--------------------~~g~-p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~ 399 (529)
......+ ..|. .....+.+ +.++..+ ..+++..++..++++++.+.|.+.++++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-a~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 286 (393)
T 1mdo_A 210 RSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNA-AIALAQL--QKLDALNARRAAIAAQYHQAMADLPFQPLS 286 (393)
T ss_dssp HHHTBTTEECC-----------CCEESSCCCBCCCCHHHH-HHHHHHH--HTHHHHHHHHHHHHHHHHHHHHTSSCEECC
T ss_pred HHHHhcCCcccchhhhcccccccccccccCccCCCCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 3211100 0111 00111211 1122222 235566777788899999999887777653
Q ss_pred CC-----CCCceEEEccCCC--CCcHHHHHHhHhcCCeEEcCCCCCCCC----------CCC------CCCeEEEccCCC
Q 009673 400 GG-----SDNHLVLVDLRPM--GIDGARVEKILDMASITLNKNSVPGDK----------SAL------VPGGIRIGSPAM 456 (529)
Q Consensus 400 ~g-----t~~~~~~v~~~~~--~i~~~~~~~~L~~~GI~v~~~~~Pg~~----------~~~------~~~~iRig~~~~ 456 (529)
.. ...+++++.+... +.+..++.+.|.+.||.+.....|... ... ....|||++...
T Consensus 287 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~ 366 (393)
T 1mdo_A 287 LPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPD 366 (393)
T ss_dssp CCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTT
T ss_pred CCCCCCCceeEEEEEEecccccccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCC
Confidence 11 2234566666420 456778888898899998765433100 000 134799997643
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 457 TTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 457 tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
++++|++++++.|++++...
T Consensus 367 ----~t~~~i~~~~~~l~~~~~~~ 386 (393)
T 1mdo_A 367 ----MTESDFDRVITALHQIAGQG 386 (393)
T ss_dssp ----CCHHHHHHHHHHHHHHHC--
T ss_pred ----CCHHHHHHHHHHHHHHHhcC
Confidence 45899999999999887643
No 97
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.93 E-value=8.1e-24 Score=220.43 Aligned_cols=331 Identities=17% Similarity=0.168 Sum_probs=220.6
Q ss_pred eeEecCCC-C--CcHHHHHHHhhhhhccCCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHH
Q 009673 105 LELIASEN-F--TSRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (529)
Q Consensus 105 i~L~asen-~--~~~~V~eal~~~l~~~y~~G~p~~r-~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A 180 (529)
+++..+++ . .+|.|++++...+.+ +..+..+.+ .|+..+...+++ +.+++++|.+. +|.+++|+.+
T Consensus 49 i~~~~~~~~~~~~~p~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~----~~la~~~~~~~-----~i~~~sG~~a 118 (401)
T 2bwn_A 49 TVWCGNDYLGMGQHPVVLAAMHEALEA-VGAGSGGTRNISGTTAYHRRLE----AEIAGLHQKEA-----ALVFSSAYNA 118 (401)
T ss_dssp EECSCSCTTSGGGCHHHHHHHHHHHHH-HCSCCCSBTTTBCCBHHHHHHH----HHHHHHTTCSE-----EEEESCHHHH
T ss_pred EEeeCCCcccCCCCHHHHHHHHHHHHH-cCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCc-----EEEECCcHHH
Confidence 44444444 1 467899999887754 211111111 133334444444 77888998742 4667999998
Q ss_pred HHHHHHhhc--CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEE
Q 009673 181 NFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLI 255 (529)
Q Consensus 181 ~~~~l~all--~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~---~~pklI 255 (529)
+..++.++. +|||+|++.++.|++... .+...|. +++.++.+ |++++++.++. .++++|
T Consensus 119 ~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~------d~~~le~~l~~~~~~~~~~v 182 (401)
T 2bwn_A 119 NDATLSTLRVLFPGLIIYSDSLNHASMIE--------GIKRNAG--PKRIFRHN------DVAHLRELIAADDPAAPKLI 182 (401)
T ss_dssp HHHHHHHHHHHSTTCEEEEETTCCHHHHH--------HHHHSCC--CEEEECTT------CHHHHHHHHHHSCTTSCEEE
T ss_pred HHHHHHHHhcCCCCCEEEECchhhHHHHH--------HHHHcCC--eEEEEcCC------CHHHHHHHHHhhccCCceEE
Confidence 888877663 699999999988765432 2233454 55555542 78999988873 278999
Q ss_pred EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccc-cc--c-CCCC-CcccEEEecccccccCCCCeEEEeeC
Q 009673 256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV--V-ADPF-KYCDVVTTTTHKSLRGPRGGMIFFKK 328 (529)
Q Consensus 256 i~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~-~~--~-~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~ 328 (529)
++++++||+ ..|+++|.++|++||+++|+|++|..|.... +. . ...+ +..|++++|++|++. ..||++++++
T Consensus 183 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~-~~GG~~~~~~ 261 (401)
T 2bwn_A 183 AFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYG-VFGGYIAASA 261 (401)
T ss_dssp EEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTC-SCCEEEEECH
T ss_pred EEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhcc-CCCCEEecCH
Confidence 998888775 7899999999999999999999998665321 11 0 0011 135899999999985 4569999876
Q ss_pred CCcchhHHHhhhcccc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCce
Q 009673 329 DPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 406 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~ 406 (529)
++.+.+.... +....+++. ..++++..+++.....++++..+++.++++++.+.|++.|++++.+ ..++
T Consensus 262 ------~~~~~l~~~~~~~~~~~~~~~-~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~ 332 (401)
T 2bwn_A 262 ------RMVDAVRSYAPGFIFSTSLPP-AIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPIIDH--GSHI 332 (401)
T ss_dssp ------HHHHHHHHHCHHHHTSBCCCH-HHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC--SSSC
T ss_pred ------HHHHHHHHhCcCceecCCCCH-HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCCCcccCC--CCCe
Confidence 5665554211 111233444 4556666678776554557888999999999999998888877653 2346
Q ss_pred EEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 407 VLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 407 ~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+++.+.. +.+..++.+.| +++||.+.....|+. +...+.+||+++..+ +++|++++++.|+++++
T Consensus 333 ~~~~~~~-~~~~~~~~~~L~~~~gi~v~~~~~~~~--~~~~~~iRis~~~~~----t~~~i~~~~~~l~~~~~ 398 (401)
T 2bwn_A 333 VPVVIGD-PVHTKAVSDMLLSDYGVYVQPINFPTV--PRGTERLRFTPSPVH----DLKQIDGLVHAMDLLWA 398 (401)
T ss_dssp EEEECCC-HHHHHHHHHHHHHHHCEECCEECTTTS--CTTCCEEEECCCTTS----CHHHHHHHHHHHHHHC-
T ss_pred EEEEeCC-hHHHHHHHHHHHhcCCEEEeecCCCCC--CCCCceEEEEeeCCC----CHHHHHHHHHHHHHHHH
Confidence 7777642 23456677777 588999865433321 112358999987543 58999999999988764
No 98
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.92 E-value=6.5e-24 Score=220.98 Aligned_cols=337 Identities=13% Similarity=0.022 Sum_probs=219.3
Q ss_pred hcceeEecCC-C---CCcHHHHHHHhhhhhccC--CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC
Q 009673 102 FKSLELIASE-N---FTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL 175 (529)
Q Consensus 102 ~~~i~L~ase-n---~~~~~V~eal~~~l~~~y--~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~ 175 (529)
++.|+|..+. + +.++.+.+++...+.... ..+|+. .....+++ +.+++++|++++ +|.++
T Consensus 32 ~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~------~~~~~~l~----~~la~~~g~~~~----~v~~~ 97 (397)
T 2zyj_A 32 PGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSP------TEGYAPLR----AFVAEWIGVRPE----EVLIT 97 (397)
T ss_dssp TTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCC------TTCCHHHH----HHHHHHHTSCGG----GEEEE
T ss_pred CCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCC------CCCCHHHH----HHHHHHhCCChh----hEEEe
Confidence 3568886543 2 257889999887765311 112322 11123444 566777787654 45557
Q ss_pred ChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcE
Q 009673 176 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL 254 (529)
Q Consensus 176 sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pkl 254 (529)
+|+ +|+..++.++++|||+|++.+|.|.++.. .+...|. +++.+++++ + .+|+++|++.+++.++++
T Consensus 98 ~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~-~-~~d~~~l~~~l~~~~~~~ 165 (397)
T 2zyj_A 98 TGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQ--------AFRLQGP--RFLTVPAGE-E-GPDLDALEEVLKRERPRF 165 (397)
T ss_dssp SHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTCC--EEEEEEEET-T-EECHHHHHHHHHHCCCSC
T ss_pred ccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHcCC--EEEecCcCC-C-CCCHHHHHHHHhhcCCeE
Confidence 776 89999999999999999999988755421 2233454 566666653 3 399999999998657898
Q ss_pred EE-EcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC--ccc------EEEeccccccc-CC
Q 009673 255 II-AGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCD------VVTTTTHKSLR-GP 319 (529)
Q Consensus 255 Ii-~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aD------iv~~S~hK~l~-Gp 319 (529)
|+ ++.++||+ ..+ +++|.++|++||+++|+|++|..+ ...+..+.++. ..| ++++|+||++. |.
T Consensus 166 v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~ 244 (397)
T 2zyj_A 166 LYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYREL-YFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPGL 244 (397)
T ss_dssp EEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTC-BCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCGGG
T ss_pred EEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccc-cCCCCCCCchhhhCcccCCCeEEEEecccccccccc
Confidence 74 56777775 455 558999999999999999997643 32222111221 122 88899999984 56
Q ss_pred CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc---CcE
Q 009673 320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL---GYK 396 (529)
Q Consensus 320 rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~---G~~ 396 (529)
|.|++++++ ++.+.+.........+++... .+++..+++.......++..+++.++++.+.+.|++. |+.
T Consensus 245 r~G~~~~~~------~~~~~l~~~~~~~~~~~~~~~-~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~ 317 (397)
T 2zyj_A 245 RVAFAVAHP------EALQKLVQAKQGADLHTPMLN-QMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVR 317 (397)
T ss_dssp CCEEEECCH------HHHHHHHHHHHHHHSSCCHHH-HHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSE
T ss_pred eeEEEecCH------HHHHHHHHHHHhhcCCCCHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeE
Confidence 789999987 676666543222222333333 3333334542100234667777888899999999874 788
Q ss_pred EecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 397 LVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 397 v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
+..+. ..+++++++.. +.+..++.+.|.+.||.+..+...+. .+..++++||++... +++|++++++.|.++
T Consensus 318 ~~~~~-~g~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~f~~-~~~~~~~iRis~~~~-----~~~~i~~~~~~l~~~ 389 (397)
T 2zyj_A 318 YTRPK-GGMFVWMELPK-GLSAEGLFRRALEENVAFVPGGPFFA-NGGGENTLRLSYATL-----DREGIAEGVRRLGRA 389 (397)
T ss_dssp ECCCS-BSSEEEEECST-TCCHHHHHHHHHHTTEEEEESGGGCT-TSCCTTEEEEECSSS-----CHHHHHHHHHHHHHH
T ss_pred EccCC-ccEEEEEEcCC-CCCHHHHHHHHHHCCCEEechHHhcC-CCCCCCeEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 76542 34567777753 55677788888778999965432111 012357899997643 589999999999988
Q ss_pred HHHH
Q 009673 477 VEIT 480 (529)
Q Consensus 477 ~~~~ 480 (529)
++..
T Consensus 390 l~~~ 393 (397)
T 2zyj_A 390 LKGL 393 (397)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7643
No 99
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.92 E-value=4.3e-24 Score=226.12 Aligned_cols=339 Identities=14% Similarity=0.122 Sum_probs=211.0
Q ss_pred cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCChH
Q 009673 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGS 178 (529)
Q Consensus 103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V~~~sGs 178 (529)
+.|+|..+++ .+++.|++++...+.+... ..+...|+......++++.+.+++. +|. +++ +|.+++|+
T Consensus 70 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~--~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~----~i~~t~G~ 141 (449)
T 3qgu_A 70 KIISLGIGDTTEPLPKYIADAMAKAAAGLAT--REGYSGYGAEQGQGALREAVASTFY--GHAGRAAD----EIFISDGS 141 (449)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHHHGGGG--SCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGG----GEEEESCH
T ss_pred CEEEeeCCCCCCCCCHHHHHHHHHHHHhhcc--ccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHH----HEEEccCH
Confidence 4688887775 3689999999887753211 0111113222223566644444443 344 443 45567776
Q ss_pred -HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccce--------EEEEEcccCCC-CCCCCHHHHHHHhh
Q 009673 179 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY--------FESMPYRLDES-TGLVDYDMLEKTAI 248 (529)
Q Consensus 179 -~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~--------~~~v~~~v~~~-~~~iD~d~le~~i~ 248 (529)
+++..+ .++++|||+|++++|.|.++.. .+...|.. ++++.++++.+ ++..|++++
T Consensus 142 ~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 207 (449)
T 3qgu_A 142 KCDIARI-QMMFGSKPTVAVQDPSYPVYVD--------TSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA----- 207 (449)
T ss_dssp HHHHHHH-HHHHCSSSCEEEEESCCTHHHH--------HHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----
T ss_pred HHHHHHH-HHHhCCCCEEEEcCCCChhHHH--------HHHHcCCcccccccccceeEEEecccccCCcCChhHc-----
Confidence 777766 8899999999999998876532 12223331 12555666543 345555432
Q ss_pred hcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC---C---cccEEEecccccc-
Q 009673 249 LFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K---YCDVVTTTTHKSL- 316 (529)
Q Consensus 249 ~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~---~aDiv~~S~hK~l- 316 (529)
.++++|+++.++||+ .. ++++|+++|++||+++|+|++|.. +...+..+.++ . ..++++.|+||++
T Consensus 208 -~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g 285 (449)
T 3qgu_A 208 -KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYAL-YISNPDCPKTIYEIPGADEVAIETCSFSKYAG 285 (449)
T ss_dssp -CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGG-GCCCTTSCSSGGGSTTGGGTEEEEEECSGGGT
T ss_pred -CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHh-hhcCCCCCCCHhhccCCCCcEEEEecchhhcC
Confidence 378999998889987 34 488888999999999999999654 33333212121 1 3468999999997
Q ss_pred -cCCCCeEEEeeCCCcch--hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc
Q 009673 317 -RGPRGGMIFFKKDPVLG--VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (529)
Q Consensus 317 -~GprgG~i~~~~~~~~~--~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~ 393 (529)
+|+|.|+++++++.... ..+...+.........+.+.. ..++...+++.......++..+++.++++.+.+.|++.
T Consensus 286 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 364 (449)
T 3qgu_A 286 FTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNI-VQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM 364 (449)
T ss_dssp CTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHH-HHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHH-HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 58889999998842100 000111221111112233333 33333334433111345778888999999999999998
Q ss_pred CcEEecCCCCCceEEEccCCCCCcHHHHH-HhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673 394 GYKLVSGGSDNHLVLVDLRPMGIDGARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 472 (529)
Q Consensus 394 G~~v~~~gt~~~~~~v~~~~~~i~~~~~~-~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~ 472 (529)
|+.+..+ ...+++|+++. +.+..++. .+++++||.+.++..++ +..+++|||++. .++++++++++.
T Consensus 365 g~~~~~~-~~~~~~~~~~~--~~~~~~~~~~l~~~~gI~v~pg~~f~---~~~~~~iRis~~------~~~e~i~~~l~~ 432 (449)
T 3qgu_A 365 GFSVYGG-DDAPYIWVGFP--GKPSWDVFAEILERCNIVTTPGSGYG---PAGEGFVRASAF------GSRENILEAVRR 432 (449)
T ss_dssp TCCEEES-SSSSEEEEECT--TSCHHHHHHHHHHHHCEECEEGGGGC---GGGTTEEEEECC------SCHHHHHHHHHH
T ss_pred CCeeeCC-CCeeEEEEECC--CCCHHHHHHHHHHHCCEEEecchHhC---CCCCCeEEEEec------CCHHHHHHHHHH
Confidence 9887754 23567788875 55666665 45566799986543222 224689999942 258999999999
Q ss_pred HHHHHH
Q 009673 473 IHEGVE 478 (529)
Q Consensus 473 i~~~~~ 478 (529)
|+++++
T Consensus 433 l~~~~~ 438 (449)
T 3qgu_A 433 FKEAYG 438 (449)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 988875
No 100
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.92 E-value=2.7e-23 Score=218.66 Aligned_cols=304 Identities=13% Similarity=0.065 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCC-----ceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 148 ELETLCQKRALAAFNLDENKW-----GVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 148 ~lE~~a~~~la~~~g~~~~~~-----~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
++.+...+++++.+|.+.++. ..+|.+++|+ +|+..++.++++|||+|++.+|.|.++. ..+...|
T Consensus 82 ~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g 153 (425)
T 2r2n_A 82 ELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTL--------QSLHPLG 153 (425)
T ss_dssp HHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHH--------HHHGGGT
T ss_pred HHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH--------HHHHHcC
Confidence 455556688888889875210 0246667776 8999999999999999999999875542 1234455
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhh-----------cCCcEEEE-cCCCCCC--CCC---HHHHHHHHHHhCCEEEE
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAIL-----------FRPKLIIA-GASAYPR--DFD---YPRMRQIADAVGALLMM 284 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~-----------~~pklIi~-~~s~~p~--~~d---~~~i~~ia~~~g~~liv 284 (529)
. +++.++++. ..+|+++|++.++. .++++|++ .+++||+ ..+ +++|.++|++||++||+
T Consensus 154 ~--~~~~v~~~~--~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~ 229 (425)
T 2r2n_A 154 C--NIINVASDE--SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIE 229 (425)
T ss_dssp C--EEEEECEET--TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred C--EEEEeCcCC--CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 4 666776653 24899999999872 25888877 4778886 555 45899999999999999
Q ss_pred ecccccccccccccCCCC---C--cccEEEecccccc-cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHH
Q 009673 285 DMAHISGLVAASVVADPF---K--YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIG 358 (529)
Q Consensus 285 D~ah~~Gli~~~~~~~~~---~--~aDiv~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~ia 358 (529)
|++|. ++.+.+....++ + +.+++++|+||++ +|+|.||+++++ ++.+.+.........+. +....+
T Consensus 230 De~~~-~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~------~l~~~l~~~~~~~~~~~-~~~~q~ 301 (425)
T 2r2n_A 230 DDPYY-FLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPK------PLIERVILHIQVSTLHP-STFNQL 301 (425)
T ss_dssp ECTTG-GGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEH------HHHHHHHHHHHTTTCSS-CHHHHH
T ss_pred ECCcc-cccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCH------HHHHHHHHHHHHhcCCC-CHHHHH
Confidence 99965 333333211122 1 2358899999998 577889999998 67666654322222233 333444
Q ss_pred HHHHHHHHhcC----chHHHHHHHHHHHHHHHHHHHHhc--CcE-EecCCCCCceEEEccCCCCCcHHH-HHHhHhcCCe
Q 009673 359 GLAVCLKHAQS----PEFKVYQNKVVSNCRALASRLVEL--GYK-LVSGGSDNHLVLVDLRPMGIDGAR-VEKILDMASI 430 (529)
Q Consensus 359 ala~al~~~~~----~~~~~~~~~i~~~a~~l~~~L~~~--G~~-v~~~gt~~~~~~v~~~~~~i~~~~-~~~~L~~~GI 430 (529)
++..+|+.... ...++..+++.++++.+.+.|++. |+. +..+ ...+++|+++.. ..+..+ +.+.|.++||
T Consensus 302 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p-~~g~~~~~~~~~-~~~~~~~~~~~l~~~gv 379 (425)
T 2r2n_A 302 MISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVP-AAGMFLWIKVKG-INDVKELIEEKAVKMGV 379 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCC-SBSSEEEEEETT-CSCCHHHHHTHHHHTTE
T ss_pred HHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCC-CceEEEEEEeCC-CCCHHHHHHHHHHHCCc
Confidence 44455654211 223556677788889999999873 763 4333 335667888753 234444 6788889999
Q ss_pred EEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 431 TLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 431 ~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.+..+...+.......+++||++.. .++++++++++.|.++++
T Consensus 380 ~v~pg~~f~~~~~~~~~~iRis~~~-----~~~~~i~~~~~~l~~~l~ 422 (425)
T 2r2n_A 380 LMLPGNAFYVDSSAPSPYLRASFSS-----ASPEQMDVAFQVLAQLIK 422 (425)
T ss_dssp ECEEGGGGSSSTTSCCCEEEEECSS-----CCHHHHHHHHHHHHHHHH
T ss_pred EEechhhhcCCCCCCCCEEEEEeCC-----CCHHHHHHHHHHHHHHHH
Confidence 9965432221111124789999653 358999999999998875
No 101
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.92 E-value=6.4e-24 Score=223.96 Aligned_cols=345 Identities=15% Similarity=0.086 Sum_probs=216.2
Q ss_pred cceeEecCCCC-CcHHHHHHHhhhhhccC-C-CCCCCC---CCCCCchhHHHHHHHHHHHHHHHcC----CCCCCCceee
Q 009673 103 KSLELIASENF-TSRAVMEAVGSCLTNKY-S-EGLPGK---RYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNV 172 (529)
Q Consensus 103 ~~i~L~asen~-~~~~V~eal~~~l~~~y-~-~G~p~~---r~~~g~~~~d~lE~~a~~~la~~~g----~~~~~~~~~V 172 (529)
..|+|..++|+ ..+.+.+++........ . +|..+. ..|+......++++...+++.+.+| ++.+ +|
T Consensus 39 ~~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~----~v 114 (435)
T 3piu_A 39 GIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN----HL 114 (435)
T ss_dssp SBEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG----GE
T ss_pred CeEEeccccccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHH----HE
Confidence 35788888886 46677777765432111 0 010000 0122222235667555566665544 4443 34
Q ss_pred ecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccc-cccceEEEEEcccCCC-CCCCCHHHHHHHhhh
Q 009673 173 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDES-TGLVDYDMLEKTAIL 249 (529)
Q Consensus 173 ~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~-~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~ 249 (529)
.+++|+ +|+..++.++++|||+|++.+|.|.++.. .+. ..|. +++.++++++ ++.+|+++|++.+++
T Consensus 115 ~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~ 184 (435)
T 3piu_A 115 VLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDR--------DLKWRTGV--EIVPIHCTSSNGFQITETALEEAYQE 184 (435)
T ss_dssp EEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HTTTTTCC--EEEEEECCGGGTSCCCHHHHHHHHHH
T ss_pred EEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHH--------HHHHhcCC--EEEEeeCCCccCCcCCHHHHHHHHHH
Confidence 445555 99999999999999999999998865531 122 3454 6666666543 367899999999976
Q ss_pred c-----CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC-C--------------c
Q 009673 250 F-----RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K--------------Y 304 (529)
Q Consensus 250 ~-----~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~--------------~ 304 (529)
. ++++|+++.++||+ .. ++++|.++|++||++||+|++|..+ ...+....++ . .
T Consensus 185 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~ 263 (435)
T 3piu_A 185 AEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGT-AFSSPSFISVMEVLKDRNCDENSEVWQ 263 (435)
T ss_dssp HHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGG-CCSSSCCCCHHHHHHC-------CGGG
T ss_pred HHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCCCCCcCHHHhccccccccccCCCC
Confidence 3 78899888888886 43 3688889999999999999997543 3222111111 0 1
Q ss_pred ccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc--CchHHHHHHHHH
Q 009673 305 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ--SPEFKVYQNKVV 380 (529)
Q Consensus 305 aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~--~~~~~~~~~~i~ 380 (529)
..++++|+||+| +|.|.|+++++++ ++.+.+......+ +. +....++++.++.... ....++..+++.
T Consensus 264 ~~i~i~s~sK~~g~~G~r~G~~~~~~~-----~~~~~~~~~~~~~--~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 335 (435)
T 3piu_A 264 RVHVVYSLSKDLGLPGFRVGAIYSNDD-----MVVAAATKMSSFG--LV-SSQTQHLLSAMLSDKKLTKNYIAENHKRLK 335 (435)
T ss_dssp GEEEEEESSSSSCCGGGCEEEEEESCH-----HHHHHHHHHGGGS--CC-CHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeeecccCCCceeEEEEEeCCH-----HHHHHHHHHhhcC--CC-CHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 128889999997 6788899999653 5655554432221 11 2223333333343111 112356677888
Q ss_pred HHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCC-----cHHHHHHh-HhcCCeEEcCCCCCCCCCCCCCCeEEEccC
Q 009673 381 SNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGI-----DGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSP 454 (529)
Q Consensus 381 ~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i-----~~~~~~~~-L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~ 454 (529)
++++.+.+.|.+.|+++..+ ..++++++++..... +..++.+. ++++||.+..+..++ +..++.+||++.
T Consensus 336 ~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRi~~~ 411 (435)
T 3piu_A 336 QRQKKLVSGLQKSGISCLNG-NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCH---CTEPGWFRVCFA 411 (435)
T ss_dssp HHHHHHHHHHHTTTCEECCC-CSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGT---CSSTTEEEEECS
T ss_pred HHHHHHHHHHHhcCCcccCC-CeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccC---CCCCCEEEEEee
Confidence 88999999999889987754 234667777753110 23344444 466699986543221 234688999975
Q ss_pred CCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 455 AMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 455 ~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
.+ ++++++++++.|++++..
T Consensus 412 ~~-----~~e~i~~~l~~l~~~l~~ 431 (435)
T 3piu_A 412 NL-----PERTLDLAMQRLKAFVGE 431 (435)
T ss_dssp SS-----CHHHHHHHHHHHHHHHHH
T ss_pred CC-----CHHHHHHHHHHHHHHHHH
Confidence 32 589999999999988764
No 102
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.92 E-value=2.9e-24 Score=224.15 Aligned_cols=330 Identities=18% Similarity=0.151 Sum_probs=214.9
Q ss_pred cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (529)
Q Consensus 103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~ 182 (529)
..|++..+++..++.|++++...+... +|.. .+...+++ +.+++++|.+. .|.+++|++|+.
T Consensus 31 ~~id~~~~~~~~~~~v~~a~~~~~~~~--------~y~~-~~~~~~l~----~~la~~~~~~~-----~v~~~~Gt~a~~ 92 (399)
T 2oga_A 31 PFLDLKAAYEELRAETDAAIARVLDSG--------RYLL-GPELEGFE----AEFAAYCETDH-----AVGVNSGMDALQ 92 (399)
T ss_dssp CSCCHHHHHHHTHHHHHHHHHHHHHHT--------CCSS-SHHHHHHH----HHHHHHTTSSE-----EEEESCHHHHHH
T ss_pred cccccCcCCCCCCHHHHHHHHHHHhcC--------CCCC-chhHHHHH----HHHHHHHCCCe-----EEEecCHHHHHH
Confidence 456666666666799999998877531 1221 23344444 67888999862 466789999999
Q ss_pred HHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673 183 EVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (529)
Q Consensus 183 ~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (529)
.++.++ ++|||+|+++++.|.+... .+...|. +++.++++++++.+|+++|++.+++ ++++|+++++
T Consensus 93 ~~l~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~n~- 160 (399)
T 2oga_A 93 LALRGLGIGPGDEVIVPSHTYIASWL--------AVSATGA--TPVPVEPHEDHPTLDPLLVEKAITP-RTRALLPVHL- 160 (399)
T ss_dssp HHHHHTTCCTTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCSSSSSBCHHHHHHHCCT-TEEEECCBCG-
T ss_pred HHHHHhCCCCcCEEEECCCccHHHHH--------HHHHCCC--EEEEEecCCCCCCcCHHHHHHhcCC-CCeEEEEeCC-
Confidence 999999 9999999999988765421 2334454 6677777755678999999999987 7888876432
Q ss_pred CCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccc--ccccCC-CCeEEEeeCCCcchhHHHh
Q 009673 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGP-RGGMIFFKKDPVLGVELES 338 (529)
Q Consensus 262 ~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~h--K~l~Gp-rgG~i~~~~~~~~~~~l~~ 338 (529)
.+...|+++|.++|+++|+++|+|++|..|....+.... ...|++++|+| |+++++ ++|+++++++ ++.+
T Consensus 161 tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~--~~~di~~~S~~~sK~~~~~G~~g~~~~~~~-----~~~~ 233 (399)
T 2oga_A 161 YGHPADMDALRELADRHGLHIVEDAAQAHGARYRGRRIG--AGSSVAAFSFYPGKNLGCFGDGGAVVTGDP-----ELAE 233 (399)
T ss_dssp GGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTEETT--CTTCEEEEECCTTSSSCCSSCCEEEEESCH-----HHHH
T ss_pred cCCccCHHHHHHHHHHcCCEEEEECcccccCccCCeecc--cccCEEEEeCCCCccCCcCCceEEEEeCCH-----HHHH
Confidence 233789999999999999999999998877543221111 13699999995 998553 8899998743 5655
Q ss_pred hhcccccCC-----------CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCce
Q 009673 339 AINNAVFPG-----------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHL 406 (529)
Q Consensus 339 ~i~~~~~p~-----------~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~ 406 (529)
++......+ ....++....+++..+++. ++++.++..++++++.+.|.+. |+.+.........
T Consensus 234 ~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~ 308 (399)
T 2oga_A 234 RLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH-----LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDP 308 (399)
T ss_dssp HHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEEC
T ss_pred HHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcc
Confidence 543321111 1112233333333334432 3455667777788888888774 7766432111222
Q ss_pred EEEccCCCCCcHHHHHHhHhcCCeEEcCCC-CCCCC-----------CCC------CCCeEEEccCCCccCCCCHHHHHH
Q 009673 407 VLVDLRPMGIDGARVEKILDMASITLNKNS-VPGDK-----------SAL------VPGGIRIGSPAMTTRGFSEKEFVA 468 (529)
Q Consensus 407 ~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~-~Pg~~-----------~~~------~~~~iRig~~~~tt~g~~~~d~~~ 468 (529)
.|+.+.....+..++.+.|.+.||.+.... .|.+. ... ..+.|||+++.. .+++|+++
T Consensus 309 ~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~----~t~edi~~ 384 (399)
T 2oga_A 309 VWHLFTVRTERRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPH----LERPQALR 384 (399)
T ss_dssp CCSSEEEECSSHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTT----CCHHHHHH
T ss_pred eeEEEEEECCCHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCC----CCHHHHHH
Confidence 221221112256788888988999986532 11000 000 025799997654 45899999
Q ss_pred HHHHHHHHHH
Q 009673 469 IADFIHEGVE 478 (529)
Q Consensus 469 la~~i~~~~~ 478 (529)
+++.|++++.
T Consensus 385 ~~~~l~~~~~ 394 (399)
T 2oga_A 385 VIDAVREWAE 394 (399)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998775
No 103
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.92 E-value=8.6e-25 Score=225.33 Aligned_cols=325 Identities=12% Similarity=0.095 Sum_probs=213.8
Q ss_pred ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 009673 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (529)
Q Consensus 104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~ 183 (529)
.+++..+.+..++ +++++...+.... |...+...+++ +.+++++|.+. .+.+++|++|+..
T Consensus 8 ~~~l~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~~~ 68 (374)
T 3uwc_A 8 YSYLERQFADIEP-YLNDLREFIKTAD---------FTLGAELEKFE----KRFAALHNAPH-----AIGVGTGTDALAM 68 (374)
T ss_dssp SCCHHHHTSSCHH-HHHHHHHHHHHTC---------CSSCHHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHH
T ss_pred eeccccCCCCchH-HHHHHHHHHHcCC---------cccChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHH
Confidence 4555556666667 8898887765431 22234445555 67888999873 3567889999999
Q ss_pred HHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673 184 VYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (529)
Q Consensus 184 ~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~ 262 (529)
++.++ ++|||+|+++++.|.++.. .+...|. +++.++++ +++.+|++++++.+++ ++++|+ ++|
T Consensus 69 ~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~~~~-~~~~v~---~~n 133 (374)
T 3uwc_A 69 SFKMLNIGAGDEVITCANTFIASVG--------AIVQAGA--TPVLVDSE-NGYVIDPEKIEAAITD-KTKAIM---PVH 133 (374)
T ss_dssp HHHHTTCCTTCEEEEESSSCHHHHH--------HHHHTTC--EEEEECBC-TTSSBCGGGTGGGCCT-TEEEEC---CBC
T ss_pred HHHHcCCCCCCEEEECCCccHHHHH--------HHHHcCC--EEEEEecC-CCCCcCHHHHHHhCCC-CceEEE---EeC
Confidence 99999 9999999999998765431 2334554 67777776 6788999999999987 788887 334
Q ss_pred CC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccc--ccccC-CCCeEEEeeCCCcchhHHH
Q 009673 263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRG-PRGGMIFFKKDPVLGVELE 337 (529)
Q Consensus 263 p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~h--K~l~G-prgG~i~~~~~~~~~~~l~ 337 (529)
|+ ..|+++|.++|+++|+++|+|++|..|....+.... ..+|++++|+| |++++ +.+|+++++++ ++.
T Consensus 134 ~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~--~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~-----~~~ 206 (374)
T 3uwc_A 134 YTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDKFVG--SWGQFACFSLHPLKNLNVWSDAGVIITHSD-----EYA 206 (374)
T ss_dssp GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETT--SSSSEEEEECSSSSSSCCSSCCEEEEESCH-----HHH
T ss_pred CcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeecc--ccccEEEEeCCCCCcCCccceeEEEEeCCH-----HHH
Confidence 43 779999999999999999999999877553221111 13699999988 99977 56899988763 454
Q ss_pred hhhcccccCCC-------CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC--cEEecCCCC---C-
Q 009673 338 SAINNAVFPGL-------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLVSGGSD---N- 404 (529)
Q Consensus 338 ~~i~~~~~p~~-------~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G--~~v~~~gt~---~- 404 (529)
+++......+. ..+.+. .+.++..++.......++++.++..++++.+.+.|.+.+ +.+...... .
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 285 (374)
T 3uwc_A 207 EKLRLYRNHGLINRDVCVEYGINC-RMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVF 285 (374)
T ss_dssp HHHHHHTBTTEEETTEESSCCCBC-BCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCC
T ss_pred HHHHHHHhcCccccCccccccccC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceee
Confidence 44432211100 001100 111222222222234567778888888999999998754 665432111 1
Q ss_pred ceEEEccCCCCCcHHHHHHhHhcCCeEEcCCC-CCCCCCC-C----------------CCCeEEEccCCCccCCCCHHHH
Q 009673 405 HLVLVDLRPMGIDGARVEKILDMASITLNKNS-VPGDKSA-L----------------VPGGIRIGSPAMTTRGFSEKEF 466 (529)
Q Consensus 405 ~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~-~Pg~~~~-~----------------~~~~iRig~~~~tt~g~~~~d~ 466 (529)
+.+.+.. .+...+.+.|.++||.+...+ .|....+ + ..+.+||+++.. ++++|+
T Consensus 286 ~~~~~~~----~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~----~t~edi 357 (374)
T 3uwc_A 286 HIYVLRV----KYRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPY----LTEEEI 357 (374)
T ss_dssp SSEEEEE----TTHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTT----SCHHHH
T ss_pred EEEEEEc----CCHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCC----CCHHHH
Confidence 1122222 156788899999999987653 1111100 0 015799987654 458999
Q ss_pred HHHHHHHHHHHH
Q 009673 467 VAIADFIHEGVE 478 (529)
Q Consensus 467 ~~la~~i~~~~~ 478 (529)
+++++.|+++++
T Consensus 358 ~~~~~~l~~~l~ 369 (374)
T 3uwc_A 358 NYIIKKVREFYL 369 (374)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999875
No 104
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.92 E-value=3e-25 Score=229.09 Aligned_cols=319 Identities=13% Similarity=0.073 Sum_probs=208.6
Q ss_pred CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cC
Q 009673 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LK 190 (529)
Q Consensus 112 n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~ 190 (529)
+.+++.+++++...+...+ |...+...++| +.+++++|.+. .+.++||++|+..++.++ ++
T Consensus 13 ~~~~~~~~~a~~~~~~~~~---------~~~~~~~~~l~----~~la~~~~~~~-----~i~~~sgt~al~~~l~~l~~~ 74 (373)
T 3frk_A 13 DEIEYEIKFKFEEIYKRNW---------FILGDEDKKFE----QEFADYCNVNY-----CIGCGNGLDALHLILKGYDIG 74 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTC---------CSSSHHHHHHH----HHHHHHHTSSE-----EEEESCHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHHCCC---------ccCCchHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCC
Confidence 3457888888887775432 12234455555 77888999863 356688999999999999 99
Q ss_pred CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHH
Q 009673 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPR 270 (529)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~ 270 (529)
|||+|++++++|.+... .+...|. +++.++++++++.+|+++|++.+++ ++++|+++++ .+...|+++
T Consensus 75 ~gd~Vi~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~n~-~G~~~~l~~ 142 (373)
T 3frk_A 75 FGDEVIVPSNTFIATAL--------AVSYTGA--KPIFVEPDIRTYNIDPSLIESAITE-KTKAIIAVHL-YGQPADMDE 142 (373)
T ss_dssp TTCEEEEETTSCTHHHH--------HHHHHSC--EEEEECEETTTTEECGGGTGGGCCT-TEEEEEEECC-TTCCCCHHH
T ss_pred CcCEEEECCCCcHHHHH--------HHHHcCC--EEEEEeccccccCcCHHHHHHhcCC-CCeEEEEECC-CcCcccHHH
Confidence 99999999998866431 2334454 7777778767789999999999987 8898885432 334789999
Q ss_pred HHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccc--ccccC-CCCeEEEeeCCCcchhHHHhhhcccccCC
Q 009673 271 MRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRG-PRGGMIFFKKDPVLGVELESAINNAVFPG 347 (529)
Q Consensus 271 i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~h--K~l~G-prgG~i~~~~~~~~~~~l~~~i~~~~~p~ 347 (529)
|.++|+++|++||+|++|+.|....+.... ...|++++|+| |++++ ++||+++++++ ++.+++......+
T Consensus 143 i~~l~~~~~~~li~D~a~~~g~~~~~~~~~--~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~-----~~~~~~~~~~~~g 215 (373)
T 3frk_A 143 IKRIAKKYNLKLIEDAAQAHGSLYKGMKVG--SLGDAAGFSFYPAKNLGSLGDGGAVVTNDK-----DLAEKIKALSNYG 215 (373)
T ss_dssp HHHHHHHHTCEEEEECTTCTTCEETTEETT--SSSSEEEEECCTTSSSCCSSSCEEEEESCH-----HHHHHHHHHHBTT
T ss_pred HHHHHHHcCCEEEEECCcccCCEECCEecc--ccccEEEEeCcCCCccCccceeEEEEeCCH-----HHHHHHHHHHhcC
Confidence 999999999999999999887653322111 13689888855 99977 67899998763 4544443221111
Q ss_pred --------CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCC--CCC--ceEEEccCCCC
Q 009673 348 --------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG--SDN--HLVLVDLRPMG 415 (529)
Q Consensus 348 --------~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~g--t~~--~~~~v~~~~~~ 415 (529)
..|.+. .+.++.+++.......+++..++..++++++.+.|.+.++.+.... ... +.+.+..
T Consensus 216 ~~~~~~~~~~g~~~--~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---- 289 (373)
T 3frk_A 216 SEKKYHHIYKGFNS--RLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRS---- 289 (373)
T ss_dssp CSBTTBCCSCCCBC--CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEE----
T ss_pred cccCCccccccccC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEeccCCCCCceeeEEEEEEe----
Confidence 011100 0111111222111234566777778888888888877665443211 111 1122222
Q ss_pred CcHHHHHHhHhcCCeEEcCCC-CCCCCCC-C----------------CCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 416 IDGARVEKILDMASITLNKNS-VPGDKSA-L----------------VPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 416 i~~~~~~~~L~~~GI~v~~~~-~Pg~~~~-~----------------~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
.+.+.+.+.|.+.||.++..+ .|.+..+ + ..+.||+++... ++++|++++++.|++..
T Consensus 290 ~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~----~t~~di~~~~~~l~~~~ 365 (373)
T 3frk_A 290 EKRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYG----MKNEEIEYVIDKINAWK 365 (373)
T ss_dssp SSHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTT----CCHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCC----CCHHHHHHHHHHHHHHh
Confidence 156788999999999997653 2221100 0 015799987654 45899999999987654
No 105
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.92 E-value=3.5e-23 Score=223.30 Aligned_cols=304 Identities=11% Similarity=0.065 Sum_probs=217.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCCC--CCCceeeecCChHHHHHHHHHhhcCCC--------CEEEEcCCCCCcccccccccc
Q 009673 144 EYIDELETLCQKRALAAFNLDE--NKWGVNVQPLSGSPANFEVYTAILKPH--------DRIMGLDLPHGGHLSHGFMTP 213 (529)
Q Consensus 144 ~~~d~lE~~a~~~la~~~g~~~--~~~~~~V~~~sGs~A~~~~l~all~pG--------D~Vl~~~~~~~g~~s~g~~~~ 213 (529)
+...++|..+++++++++|++. +.+ ..+.+++|++|+..++.++.++| |+|++..+.|.+..
T Consensus 135 p~~~~le~~l~~~la~~~g~~~~~~~v-~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~------- 206 (514)
T 3mad_A 135 PSTAKFEAEVVAMTAHMLGGDAAGGTV-CGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFD------- 206 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTTGGGGTSCC-EEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHH-------
T ss_pred hHHHHHHHHHHHHHHHHcCCCCccCCc-ceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHH-------
Confidence 4456788888899999999984 222 11445666699999999998877 99999998876532
Q ss_pred ccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccc
Q 009673 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISG 291 (529)
Q Consensus 214 ~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~G 291 (529)
+.+...|. +++.+++++ ++.+|+++|++++++ ++++|+++.++||+ ..|+++|.++|++||++||+|++|..+
T Consensus 207 -~~~~~~G~--~v~~v~~~~-~~~~d~~~Le~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~ 281 (514)
T 3mad_A 207 -KAAQYFGI--KLVRTPLDA-DYRADVAAMREAITP-NTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGF 281 (514)
T ss_dssp -HHHHHHTC--EEEEECBCT-TSCBCHHHHHHHCCT-TEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred -HHHHHcCC--eeEEeeeCC-CCCCCHHHHHHHhcc-CCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccc
Confidence 23344565 566777764 789999999999987 89999999888765 789999999999999999999997654
Q ss_pred ccc----ccccCCCC----CcccEEEecccccccCC-CCeEEEeeCCCcchhHHHhhhcc---------cccCCCCCCCh
Q 009673 292 LVA----ASVVADPF----KYCDVVTTTTHKSLRGP-RGGMIFFKKDPVLGVELESAINN---------AVFPGLQGGPH 353 (529)
Q Consensus 292 li~----~~~~~~~~----~~aDiv~~S~hK~l~Gp-rgG~i~~~~~~~~~~~l~~~i~~---------~~~p~~~g~p~ 353 (529)
... .+....++ .++|++++|+||++.|+ +.|+++++++ .+...... ...+...|++.
T Consensus 282 ~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~gs~~ 356 (514)
T 3mad_A 282 ILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRP-----DLLHYQYFIAADWPGGLYFSPTFAGSRP 356 (514)
T ss_dssp THHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSH-----HHHTTTCEEESSCTTCSEEESSSCSSCC
T ss_pred cchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCH-----HHhccccccccccCCCcccCCccCCCCc
Confidence 331 11100112 26899999999996555 4599998873 23221110 11123355666
Q ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEE
Q 009673 354 NHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITL 432 (529)
Q Consensus 354 ~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v 432 (529)
...++++++++..+...++++..+++.++++++.+.|++. |++++.+. ..++++.. .+.+..++.+.|.+.||.+
T Consensus 357 ~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~--~~~~~~~~--~~~~~~~l~~~L~~~Gi~v 432 (514)
T 3mad_A 357 GALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP--LWVIAVAS--DELNIYQVMEEMAGRGWRL 432 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC--SSEEEEEC--SSSCHHHHHHHHHTTTCBC
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC--eEEEEEeC--CCCCHHHHHHHHHhcCCEe
Confidence 6666677777776655667888999999999999999984 88887643 23444433 3557788888898889987
Q ss_pred cCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 433 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 433 ~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
... ..+..+|++....+ .++++++++++.|++++...
T Consensus 433 ~g~--------~~~~~~Ri~~~~~~---~~~e~i~~~l~~L~~~l~~~ 469 (514)
T 3mad_A 433 NGL--------HRPPAFHVALTLRH---TEPGVVDRFLADLQDAVAQV 469 (514)
T ss_dssp EEE--------TTTTEEEEECCGGG---GSTTHHHHHHHHHHHHHHHH
T ss_pred ccC--------CCCCeEEEEEecCC---CCHHHHHHHHHHHHHHHHHH
Confidence 321 12467999865333 34699999999999988754
No 106
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.92 E-value=6.7e-24 Score=222.61 Aligned_cols=330 Identities=16% Similarity=0.140 Sum_probs=214.4
Q ss_pred CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-cC
Q 009673 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LK 190 (529)
Q Consensus 112 n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l~ 190 (529)
.++++.+++++...+.+.....|+. .++..+..++++ +++++++|.+. .|.+++|++|+..++.++ ++
T Consensus 12 ~~~~~~~~~a~~~~~~~~~~~~~~~--~~g~~~l~~~l~----~~la~~~g~~~-----~i~~~~gt~al~~~~~~~~~~ 80 (418)
T 2c81_A 12 PQHSDRTRRKIEEVFQSNRWAISGY--WTGEESMERKFA----KAFADFNGVPY-----CVPTTSGSTALMLALEALGIG 80 (418)
T ss_dssp SCCCHHHHHHHHHHHHHTCCSTTSB--CCSSCCHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHhcCCccccCc--ccCCHHHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcCCC
Confidence 4568999999988876432111221 122222244444 78889999873 466789999999999999 89
Q ss_pred CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHH
Q 009673 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPR 270 (529)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~ 270 (529)
|||+|+++++.|.+... .+...|. +++.++++++++.+|+++|++.+++ ++++|+++++ .+...++++
T Consensus 81 ~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~-~G~~~~~~~ 148 (418)
T 2c81_A 81 EGDEVIVPSLTWIATAT--------AVLNVNA--LPVFVDVEADTYCIDPQLIKSAITD-KTKAIIPVHL-FGSMANMDE 148 (418)
T ss_dssp TTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCSBCHHHHGGGCCT-TEEEECCBCC-TTCCCCHHH
T ss_pred CcCEEEECCCccHhHHH--------HHHHcCC--EEEEEecCCCCCCcCHHHHHHhhCC-CCeEEEEeCC-cCCcccHHH
Confidence 99999999998765531 2334554 6777777755789999999999987 7898887643 344789999
Q ss_pred HHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecc--cccccCCCCeEEEeeCCCcchhHHHhhhcccccC--
Q 009673 271 MRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTT--HKSLRGPRGGMIFFKKDPVLGVELESAINNAVFP-- 346 (529)
Q Consensus 271 i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~--hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p-- 346 (529)
|.++|+++|++||+|++|..+....+..... ..|+++.|+ ||+++++++|+++++++ ++.+++......
T Consensus 149 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~~~s~s~~K~~~~g~~g~~~~~~~-----~l~~~~~~~~~~~~ 221 (418)
T 2c81_A 149 INEIAQEHNLFVIEDCAQSHGSVWNNQRAGT--IGDIGAFSCQQGKVLTAGEGGIIVTKNP-----RLFELIQQLRADSR 221 (418)
T ss_dssp HHHHHHHTTCEEEEECTTCTTCEETTEETTS--SSSEEEEECCTTSSSCSSSCEEEEESCH-----HHHHHHHHHHBTTE
T ss_pred HHHHHHHCCCEEEEECcccccCccCCEeccc--ccceEEEeccCCcccCCCCeEEEEECCH-----HHHHHHHHHHHhCc
Confidence 9999999999999999988775332211111 235666666 99986558899998642 454443321111
Q ss_pred ------------CC--------CCCC-hHHHH-HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCC
Q 009673 347 ------------GL--------QGGP-HNHTI-GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSD 403 (529)
Q Consensus 347 ------------~~--------~g~p-~~~~i-aala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~ 403 (529)
+. .|-. ....+ +++ .+... ..++++.++..++++++.+.|.+. |+.+..+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~--~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 297 (418)
T 2c81_A 222 VYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAI--LLDQL--QELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQ 297 (418)
T ss_dssp EECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHH--HHHHH--TTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTT
T ss_pred cccccccccccchhhccccccccCcCCCcCHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCC
Confidence 00 0000 00111 222 12222 245677788888899999999875 8887632111
Q ss_pred ----C-ceEEEccCC---CCCcHHHHHHhHhcC-CeE---EcCCCCCCCCC-CC-----------------------C--
Q 009673 404 ----N-HLVLVDLRP---MGIDGARVEKILDMA-SIT---LNKNSVPGDKS-AL-----------------------V-- 445 (529)
Q Consensus 404 ----~-~~~~v~~~~---~~i~~~~~~~~L~~~-GI~---v~~~~~Pg~~~-~~-----------------------~-- 445 (529)
. +++.+.+.. .+++.+++.+.|.+. ||. ++..+.|.+.. .+ .
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (418)
T 2c81_A 298 VSRQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPV 377 (418)
T ss_dssp EEECCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHH
T ss_pred CcccccEEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChH
Confidence 2 233355532 256778888888777 999 87655442210 00 0
Q ss_pred -----CCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 446 -----PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 446 -----~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.+.|||+++..+ -+++|++++++.|++++.
T Consensus 378 ~~~~~~~~lrl~~~~~~---gt~edi~~~~~~l~~~~~ 412 (418)
T 2c81_A 378 SERASGQSIVIHHAILL---AEPSHLSLLVDAVAELAR 412 (418)
T ss_dssp HHHHHHHEEEEEGGGGG---SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCEEEecCCccC---CCHHHHHHHHHHHHHHHH
Confidence 147999976543 058999999999998875
No 107
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.92 E-value=1.3e-23 Score=220.97 Aligned_cols=339 Identities=14% Similarity=0.087 Sum_probs=217.1
Q ss_pred cceeEecCCCC-CcHHHHHHHhhhhhcc--------C--CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC----CCCCC
Q 009673 103 KSLELIASENF-TSRAVMEAVGSCLTNK--------Y--SEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENK 167 (529)
Q Consensus 103 ~~i~L~asen~-~~~~V~eal~~~l~~~--------y--~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g----~~~~~ 167 (529)
..|+|..++|+ .++.+.+++....... . ...|+. .....++++.+.+++.+.+| ++++
T Consensus 37 ~~i~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~g~~~lr~~la~~~~~~~g~~~~~~~~- 109 (428)
T 1iay_A 37 GVIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQD------YHGLPEFRKAIAKFMEKTRGGRVRFDPE- 109 (428)
T ss_dssp SBEECSSCCCCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCC------TTCCHHHHHHHHHHHHHHTTTCSCCCTT-
T ss_pred ceeeeccccchhhHHHHHHHHHhccccccccccccccHhhcCCCC------CCCcHHHHHHHHHHHHHhcCCCCCCChh-
Confidence 34778777876 4567777776432100 0 011222 11134666666677777777 4444
Q ss_pred CceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHH
Q 009673 168 WGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEK 245 (529)
Q Consensus 168 ~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~ 245 (529)
+|.+++|+ +++..++.++++|||+|++++|.|.++.. . .....|. ++++++++.+ ++.+|++++++
T Consensus 110 ---~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~-~------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~ 177 (428)
T 1iay_A 110 ---RVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNR-D------LRWRTGV--QLIPIHCESSNNFKITSKAVKE 177 (428)
T ss_dssp ---SCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHH-H------TTTTTCC--EEEEECCCTTTTTCCCHHHHHH
T ss_pred ---hEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHH-H------HHHhcCC--EEEEeecCCccCCcCCHHHHHH
Confidence 34557776 89999999999999999999998865421 0 1123454 6667766543 45789999999
Q ss_pred Hhhhc-----CCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC----Cc-------
Q 009673 246 TAILF-----RPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF----KY------- 304 (529)
Q Consensus 246 ~i~~~-----~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~----~~------- 304 (529)
.+++. ++++|+++.++||+ ..+ +++|.++|+++|++||+|++|..+ ...+....++ ..
T Consensus 178 ~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 256 (428)
T 1iay_A 178 AYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAAT-VFDTPQFVSIAEILDEQEMTYCN 256 (428)
T ss_dssp HHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGG-CCSSSCCCCHHHHHTSGGGTTSC
T ss_pred HHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEecccccc-ccCCCCccCHHHhccccccccCC
Confidence 88752 68888888888876 667 899999999999999999997643 2222111111 12
Q ss_pred cc--EEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh--cCchHHHHHHH
Q 009673 305 CD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSPEFKVYQNK 378 (529)
Q Consensus 305 aD--iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~--~~~~~~~~~~~ 378 (529)
.| +++.|+||++ +|.|.|+++++++ ++.+.+.....++ +. +....+++..+++.. ....+++..++
T Consensus 257 ~d~viv~~s~sK~~g~~Glr~G~~~~~~~-----~~~~~~~~~~~~~--~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 328 (428)
T 1iay_A 257 KDLVHIVYSLSKDMGLPGFRVGIIYSFND-----DVVNCARKMSSFG--LV-STQTQYFLAAMLSDEKFVDNFLRESAMR 328 (428)
T ss_dssp TTSEEEEEESTTTSSCGGGCEEEEEESCH-----HHHHHHHHHHTTS--CC-CHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecchhhcCCCCceEEEEEeCCH-----HHHHHHHHHHhcc--cC-CHHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 57 8899999998 6788899998542 5666665432221 22 233333333334321 01123567788
Q ss_pred HHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCC-----CcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEc
Q 009673 379 VVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG-----IDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIG 452 (529)
Q Consensus 379 i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~-----i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig 452 (529)
+.++++.+.+.|.+.|+++..+ ..+.++++++.... .+..++.+.|. ++||.+..+...+ ...++++||+
T Consensus 329 ~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~---~~~~~~iRis 404 (428)
T 1iay_A 329 LGKRHKHFTNGLEVVGIKCLKN-NAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFE---CQEPGWFRVC 404 (428)
T ss_dssp HHHHHHHHHHHHHHTTCCBCCC-SSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGT---CSSSSEEEEE
T ss_pred HHHHHHHHHHHHHhcCCcccCC-CeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEE
Confidence 8889999999998888876543 23456777774311 12345666665 4699986542211 1125689999
Q ss_pred cCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 453 SPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 453 ~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+.. .++++++++++.|+++++
T Consensus 405 ~~~-----~~~e~i~~~~~~l~~~l~ 425 (428)
T 1iay_A 405 FAN-----MDDGTVDIALARIRRFVG 425 (428)
T ss_dssp CSS-----SCHHHHHHHHHHHHHHHH
T ss_pred Eec-----CCHHHHHHHHHHHHHHHh
Confidence 752 458999999999998875
No 108
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.92 E-value=1.1e-23 Score=217.10 Aligned_cols=325 Identities=13% Similarity=0.041 Sum_probs=216.2
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCCh-
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG- 177 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V~~~sG- 177 (529)
+.|+|..+++. +|+.|++++...+.. ..+|+. .....++++...+++.+.+|+ +++ +|.+++|
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~------~~g~~~lr~~la~~l~~~~g~~~~~~----~i~~t~g~ 91 (376)
T 3ezs_A 24 RGLDLGIGEPQFETPKFIQDALKNHTHS--LNIYPK------SAFEESLRAAQRGFFKRRFKIELKEN----ELISTLGS 91 (376)
T ss_dssp CCCBCSSCCCCSCCCHHHHHHHHTTGGG--GGSCCC------TTCCHHHHHHHHHHHHHHHSCCCCGG----GEEEESSS
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHhhhh--cCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCHH----HEEECcCc
Confidence 45778777763 579999999877622 123332 111245666666888888898 443 3444555
Q ss_pred HHHHHHHHHhhcCC--CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673 178 SPANFEVYTAILKP--HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (529)
Q Consensus 178 s~A~~~~l~all~p--GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI 255 (529)
++|+..++.++++| ||+|++.+|.|.++.. .+...|. +++.+++++++ .+++ ++++.+.+ ++++|
T Consensus 92 ~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~-~~~~-~l~~~~~~-~~~~v 158 (376)
T 3ezs_A 92 REVLFNFPSFVLFDYQNPTIAYPNPFYQIYEG--------AAKFIKA--KSLLMPLTKEN-DFTP-SLNEKELQ-EVDLV 158 (376)
T ss_dssp HHHHHHHHHHHTTTCSSCEEEEEESCCTHHHH--------HHHHTTC--EEEEEECCGGG-TSCC-CCCHHHHH-HCSEE
T ss_pred HHHHHHHHHHHcCCCCCCEEEEecCCcHhHHH--------HHHHcCC--EEEEcccCCCC-Ccch-hHHhhhcc-CCCEE
Confidence 59999999999999 9999999988765421 2334454 66666665432 3344 66667766 79999
Q ss_pred EEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC----------CCcccEEEecccccc--cC
Q 009673 256 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP----------FKYCDVVTTTTHKSL--RG 318 (529)
Q Consensus 256 i~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~----------~~~aDiv~~S~hK~l--~G 318 (529)
+++.++||+ ..+ +++|.++|++||+++|+|++|.. +...+..... ....++++.|+||++ +|
T Consensus 159 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G 237 (376)
T 3ezs_A 159 ILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSE-IYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPG 237 (376)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGG
T ss_pred EEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchh-hccCCCCCCHHHccccccccccCcEEEEecchhccCCcc
Confidence 998888886 444 67788889999999999999654 3332211111 113568999999997 67
Q ss_pred CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEe
Q 009673 319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV 398 (529)
Q Consensus 319 prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~ 398 (529)
.|.|++++++ ++.+.+........ .+++....+++..+++. ...+++..+++.++++.+.+.|+ |+.
T Consensus 238 ~r~G~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~--~~~-- 304 (376)
T 3ezs_A 238 LRSGFIAGDS------RLLEKYKAFRAYLG-YTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK--NTL-- 304 (376)
T ss_dssp GCCEEEEECH------HHHHHHHHHHTTTC-CCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST--TCC--
T ss_pred ceeEEEeeCH------HHHHHHHHHHhhhc-CCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc--CCC--
Confidence 8889999877 67776654332222 23344445554555653 23457777888888888888886 665
Q ss_pred cCCCCCceEEEccCCCCCcHHHHHHhHhc-CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 399 SGGSDNHLVLVDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 399 ~~gt~~~~~~v~~~~~~i~~~~~~~~L~~-~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
.+ ..++++++++. +..++.+.|.+ +||.+..+..++. ....++++||++.. +++|++++++.|++++
T Consensus 305 ~~-~~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~-~~~~~~~iRis~~~------~~~~i~~~l~~l~~~l 372 (376)
T 3ezs_A 305 IY-PYSFYVYLPVQ----NGENFAKTLYQNEGIITLPALYLGR-NRIGADYVRLALVY------DTPLLEKPLEIIETYR 372 (376)
T ss_dssp CC-SBSSEEEEECS----CHHHHHHHHHHHHCCBCEEGGGGCS-TTTTTTEEEEECCS------CHHHHHHHHHHHHHHH
T ss_pred CC-CcceEEEEECC----CHHHHHHHHHHhCCEEEeCcHHhCC-CCCCCCeEEEEEcC------CHHHHHHHHHHHHHHH
Confidence 22 23456777775 46677666765 8999865433221 12346899999652 5899999999998876
Q ss_pred H
Q 009673 478 E 478 (529)
Q Consensus 478 ~ 478 (529)
+
T Consensus 373 ~ 373 (376)
T 3ezs_A 373 E 373 (376)
T ss_dssp C
T ss_pred H
Confidence 4
No 109
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.92 E-value=4.6e-23 Score=220.26 Aligned_cols=327 Identities=16% Similarity=0.133 Sum_probs=214.6
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh----c
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----L 189 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al----l 189 (529)
..|.+.+++...++ .|+. |.... ..+...+++..+++++++++|++. ..+.+++|++|+..++.++ .
T Consensus 78 ~~p~v~~~~~~~~~-~~~~-~~~~~---~~~g~~~l~~~l~~~la~~~g~~~----~~~~~~ggt~a~~~al~~~~~~~~ 148 (474)
T 1wyu_B 78 YNPKLHEEAARLFA-DLHP-YQDPR---TAQGALRLMWELGEYLKALTGMDA----ITLEPAAGAHGELTGILIIRAYHE 148 (474)
T ss_dssp CCCHHHHHHHHTTS-SCCT-TSCGG---GCHHHHHHHHHHHHHHHHHHTCSE----EECCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-hcCC-CCchh---hChHHHHHHHHHHHHHHHHHCCCc----eeecChHHHHHHHHHHHHHHHHHH
Confidence 34667777765432 2311 11100 022234556667799999999975 2345577779988766554 4
Q ss_pred CCCC-----EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC
Q 009673 190 KPHD-----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 264 (529)
Q Consensus 190 ~pGD-----~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~ 264 (529)
++|| +|+++++.|+.+.. .+...|. +++.++++ +++.+|+++|++++++ ++++|+++++|+.+
T Consensus 149 ~~Gd~~~r~~Vlv~~~~h~~~~~--------~~~~~G~--~vv~v~~~-~~~~~d~~~L~~~i~~-~t~~v~~~~pn~~G 216 (474)
T 1wyu_B 149 DRGEGRTRRVVLVPDSAHGSNPA--------TASMAGY--QVREIPSG-PEGEVDLEALKRELGP-HVAALMLTNPNTLG 216 (474)
T ss_dssp HTTCTTTCCEEEEETTSCTHHHH--------HHHHTTC--EEEEECBC-TTSSBCHHHHHHHCST-TEEEEEECSSCTTS
T ss_pred hcCCccCCCEEEEeCCcChhhHH--------HHHHCCC--EEEEecCC-CCCCcCHHHHHHhhCC-CceEEEEECCCCCc
Confidence 6898 99999987765431 2344564 67777776 4689999999999987 78999998776433
Q ss_pred -C-CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccccCC------CCeEEEeeCCCcchhH
Q 009673 265 -D-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGP------RGGMIFFKKDPVLGVE 335 (529)
Q Consensus 265 -~-~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~Gp------rgG~i~~~~~~~~~~~ 335 (529)
. .++++|+++|++||+++|+|++|..+.. +.. .+.. ++|++++|+||+|.+| +.|++++++ +
T Consensus 217 ~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~--g~~-~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~------~ 287 (474)
T 1wyu_B 217 LFERRILEISRLCKEAGVQLYYDGANLNAIM--GWA-RPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKA------H 287 (474)
T ss_dssp CCCTTHHHHHHHHHHHTCEEEEEGGGGGGTT--TTC-CHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECG------G
T ss_pred ccCCCHHHHHHHHHHcCCEEEEeCchhhhhc--cCC-CcccCCCcEEEEeCccccccCCCCCCCCeEEEEEcH------H
Confidence 4 5899999999999999999999865543 111 1111 5899999999998644 679999988 4
Q ss_pred HHhhhcccc-------c------C-----CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEE
Q 009673 336 LESAINNAV-------F------P-----GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL 397 (529)
Q Consensus 336 l~~~i~~~~-------~------p-----~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v 397 (529)
+.+.+.... + + ...++++...+++....+.....+++++..+++.++++++.+.|++.|+++
T Consensus 288 l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g~~~ 367 (474)
T 1wyu_B 288 LAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKGYRV 367 (474)
T ss_dssp GGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcEe
Confidence 555443100 0 0 011122332233222334433234567778889999999999998888887
Q ss_pred ecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 398 VSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 398 ~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
..++...+.+++++ +.+.+..++.+.|.+.||.+.....| ....+.+||++... .+++|++++++.|++++
T Consensus 368 ~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~Gi~~~~~~~~----~~~~~~lRis~~~~----~t~e~id~~~~~L~~~~ 438 (474)
T 1wyu_B 368 PYDGPSMHEFVAQP-PEGFRALDLAKGLLELGFHPPTVYFP----LIVKEALMVEPTET----EAKETLEAFAEAMGALL 438 (474)
T ss_dssp SSCSSCCSCEEEBC-STTCCHHHHHHHHHHTTCCCCEESCS----TTSTTCEEECCCTT----SCHHHHHHHHHHHHHHH
T ss_pred cCCCCcceEEEEEc-CCCCCHHHHHHHHHHCCccccccccc----cccCCEEEEEeecC----CCHHHHHHHHHHHHHHH
Confidence 44332223356676 34567778888887889975221111 11357899997643 35899999999998887
Q ss_pred HH
Q 009673 478 EI 479 (529)
Q Consensus 478 ~~ 479 (529)
..
T Consensus 439 ~~ 440 (474)
T 1wyu_B 439 KK 440 (474)
T ss_dssp TS
T ss_pred Hh
Confidence 54
No 110
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.92 E-value=1.5e-23 Score=219.48 Aligned_cols=341 Identities=15% Similarity=0.112 Sum_probs=219.0
Q ss_pred cceeEecCC------CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc------C--CCCCCC
Q 009673 103 KSLELIASE------NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF------N--LDENKW 168 (529)
Q Consensus 103 ~~i~L~ase------n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~------g--~~~~~~ 168 (529)
+.|+|..+. .++++.+++++...+.+....+|+. .....++++...+++.+.| | ++++
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~-- 105 (416)
T 1bw0_A 34 PIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFP------TVGSPEAREAVATWWRNSFVHKEELKSTIVKD-- 105 (416)
T ss_dssp CCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCC------TTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGG--
T ss_pred CeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCC------CCCCHHHHHHHHHHHHhhhcccccCCCCCCcc--
Confidence 457776654 2468999999988775432223322 1122455544445554222 2 3333
Q ss_pred ceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHH
Q 009673 169 GVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKT 246 (529)
Q Consensus 169 ~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~ 246 (529)
+|.+++|+ +|+..++.++++|||+|++++|.|.++.. .+...|. +++.++++++ ++.+|+++|++.
T Consensus 106 --~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~ 173 (416)
T 1bw0_A 106 --NVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYET--------VCKAYGI--GMHFYNCRPENDWEADLDEIRRL 173 (416)
T ss_dssp --GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTC--EEEEEEEEGGGTTEECHHHHHHH
T ss_pred --eEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHH--------HHHHcCc--EEEEeecCcccCCCCCHHHHHHH
Confidence 45556665 89999999999999999999998765421 2334454 5566666543 467999999999
Q ss_pred hhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccc----cCCCC---C--cccEEEecc
Q 009673 247 AILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV----VADPF---K--YCDVVTTTT 312 (529)
Q Consensus 247 i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~----~~~~~---~--~aDiv~~S~ 312 (529)
+++ ++++|+++.++||+ ..+ +++|.++|++||++||+|++|.. +...+. ...++ . ..+++++|+
T Consensus 174 l~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~ 251 (416)
T 1bw0_A 174 KDD-KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAG-MVFKGKDPNATFTSVADFETTVPRVILGGT 251 (416)
T ss_dssp CCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTT-CBCCSSCTTCCCCCTTSSCCSCCEEEEEES
T ss_pred hcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCCCCccCHHHccCCCcEEEEecc
Confidence 987 78888888888886 566 89999999999999999999654 443332 11122 1 124788999
Q ss_pred cccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673 313 HKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (529)
Q Consensus 313 hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L 390 (529)
||++ +|+|.|+++++++......+...+..... ...+++....+++..+|+......+++..+++.++++.+.+.|
T Consensus 252 sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 329 (416)
T 1bw0_A 252 AKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGM--LVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHI 329 (416)
T ss_dssp TTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHH--HHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHhc--cccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9986 67889999998730000112222221100 0123344455555556663322345778888999999999999
Q ss_pred Hhc-CcEEecCCCCCceEEEccCC----CCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHH
Q 009673 391 VEL-GYKLVSGGSDNHLVLVDLRP----MGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK 464 (529)
Q Consensus 391 ~~~-G~~v~~~gt~~~~~~v~~~~----~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~ 464 (529)
++. |+.++.+. ...++++.+.. ...+..++.+.| +++||.+..+...+ .++++||++. .+++
T Consensus 330 ~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~-----~~~~iRis~~------~~~e 397 (416)
T 1bw0_A 330 GECIGLAPTMPR-GAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFH-----APGFTRLTTT------RPVE 397 (416)
T ss_dssp TTSTTEEECCCC-BTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGT-----CTTEEEEECC------SCHH
T ss_pred HhCCCCcccCCC-eeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccC-----CCCeEEEEec------CCHH
Confidence 885 88876442 24556665532 123566665555 78999986432221 2578999973 3588
Q ss_pred HHHHHHHHHHHHHHH
Q 009673 465 EFVAIADFIHEGVEI 479 (529)
Q Consensus 465 d~~~la~~i~~~~~~ 479 (529)
++++.++.|.++++.
T Consensus 398 ~l~~~l~~l~~~l~~ 412 (416)
T 1bw0_A 398 VYREAVERIKAFCQR 412 (416)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999888764
No 111
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.92 E-value=1.5e-23 Score=220.44 Aligned_cols=339 Identities=17% Similarity=0.077 Sum_probs=222.0
Q ss_pred cceeEecCCC----CCcHHHHHHHhhhhhccC--CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC---CCCCCceeee
Q 009673 103 KSLELIASEN----FTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNL---DENKWGVNVQ 173 (529)
Q Consensus 103 ~~i~L~asen----~~~~~V~eal~~~l~~~y--~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~---~~~~~~~~V~ 173 (529)
+.|+|..+.. ++++.+.+++...+.... ..+|+. .....++++...+++.+.+|. +++ +|.
T Consensus 44 ~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~------~~g~~~lr~~la~~l~~~~g~~~~~~~----~v~ 113 (425)
T 1vp4_A 44 DAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYST------TEGDPVLKQQILKLLERMYGITGLDED----NLI 113 (425)
T ss_dssp TCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCC------TTCCHHHHHHHHHHHHHHHCCCSCCGG----GEE
T ss_pred CceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCC------CCCCHHHHHHHHHHHHhccCCCCCCcc----cEE
Confidence 5678765542 257889999887775321 112322 112346666666777777684 443 455
Q ss_pred cCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---
Q 009673 174 PLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--- 249 (529)
Q Consensus 174 ~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~--- 249 (529)
+++|+ +|+..++.++++|||+|++.+|.|.++. ..+...|. +++.+++++ + .+|+++|++.+++
T Consensus 114 ~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~--------~~~~~~g~--~~~~v~~~~-~-~~d~~~l~~~l~~~~~ 181 (425)
T 1vp4_A 114 FTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAI--------NAFRQYLA--NFVVVPLED-D-GMDLNVLERKLSEFDK 181 (425)
T ss_dssp EEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--------HHHHTTTC--EEEEEEEET-T-EECHHHHHHHHHHHHH
T ss_pred EeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH--------HHHHHcCC--EEEEeccCC-C-CCCHHHHHHHHHhhhh
Confidence 67776 8999999999999999999998775542 12334554 566666664 3 3999999999875
Q ss_pred ----cCCcEE-EEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---C--cccEEEecccc
Q 009673 250 ----FRPKLI-IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHK 314 (529)
Q Consensus 250 ----~~pklI-i~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~--~aDiv~~S~hK 314 (529)
.++++| +++.++||+ ..+ +++|.++|+++|+++|+|++|..+ ...+....++ . ..+++++|+||
T Consensus 182 ~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~~~~~~i~~~s~sK 260 (425)
T 1vp4_A 182 NGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGAL-RYEGETVDPIFKIGGPERVVLLNTFSK 260 (425)
T ss_dssp TTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTC-BCSSCCCCCHHHHHCTTTEEEEEESTT
T ss_pred cccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccc-cCCCCCCcCHHHhCCCCCEEEEecccc
Confidence 368888 467788886 444 678999999999999999997543 3222211122 1 24688999999
Q ss_pred ccc-CCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHHHh
Q 009673 315 SLR-GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRALASRLVE 392 (529)
Q Consensus 315 ~l~-GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-~~~~~~~~~~i~~~a~~l~~~L~~ 392 (529)
+++ |.|.|++++++ ++.+.+.....+...+. +....+++..+|+... ....++..+++.++++.+.+.|++
T Consensus 261 ~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 333 (425)
T 1vp4_A 261 VLAPGLRIGMVAGSK------EFIRKIVQAKQSADLCS-PAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEE 333 (425)
T ss_dssp TTCGGGCEEEEECCH------HHHHHHHHHHHHHHSSC-CHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccceEEEeeCH------HHHHHHHHHhhhhcCCC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 984 67789999987 67666654322211223 3334444445665421 122366777788899999999987
Q ss_pred c-----CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673 393 L-----GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 467 (529)
Q Consensus 393 ~-----G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~ 467 (529)
. |+.+..+. ..+++++++.. +.+..++.+.|.+.||.+..+...+. .+..++++||++... +++|++
T Consensus 334 ~~~~~~g~~~~~~~-~g~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~g~~f~~-~~~~~~~iRis~~~~-----~~e~i~ 405 (425)
T 1vp4_A 334 YFSDIPGVKWVKSE-GGLFIWLTLPE-GFDTWEMFEYAKRKKVFYVPGRVFKV-YDEPSPSMRLSFCLP-----PDEKIV 405 (425)
T ss_dssp HSTTSTTCEECCCS-BSSEEEEECCT-TCCTTTTHHHHHHHTEECEEGGGGCT-TCCCCSEEEEECSSS-----CHHHHH
T ss_pred hCCCCCceEEecCC-ccEEEEEEcCC-CCCHHHHHHHHHHCCCEEECchhhcC-CCCCCCeEEEEeCCC-----CHHHHH
Confidence 4 68876442 34567777753 44556666667667999865432111 112357899997542 589999
Q ss_pred HHHHHHHHHHHH
Q 009673 468 AIADFIHEGVEI 479 (529)
Q Consensus 468 ~la~~i~~~~~~ 479 (529)
++++.|.+++..
T Consensus 406 ~~l~~l~~~l~~ 417 (425)
T 1vp4_A 406 EGIKRLREVVLE 417 (425)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998864
No 112
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.92 E-value=1.5e-23 Score=221.46 Aligned_cols=351 Identities=12% Similarity=-0.007 Sum_probs=215.2
Q ss_pred hcce-eEecCCCCCcHHHHHHHhhhhhccCC---------------CCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC
Q 009673 102 FKSL-ELIASENFTSRAVMEAVGSCLTNKYS---------------EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE 165 (529)
Q Consensus 102 ~~~i-~L~asen~~~~~V~eal~~~l~~~y~---------------~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~ 165 (529)
.+.| +|..+.+..++.+.+++...+...+. .+|+. .....++++...+++.+.+|...
T Consensus 31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~------~~g~~~lr~~ia~~l~~~~g~~~ 104 (444)
T 3if2_A 31 DQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSN------PQGDSAFIDALVGFFNRHYDWNL 104 (444)
T ss_dssp SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCC------TTCCHHHHHHHHHHHHHHHCCCC
T ss_pred chhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCC------CCCCHHHHHHHHHHHHhhcCCCC
Confidence 4678 88777665565554444433322111 12322 22235667666677777777643
Q ss_pred CCCceeeecCChH-HHHHHHHHhhcCCCC--------------EEEEc-CCCCCccccccccccccccccccceEEEEEc
Q 009673 166 NKWGVNVQPLSGS-PANFEVYTAILKPHD--------------RIMGL-DLPHGGHLSHGFMTPKRRVSGTSIYFESMPY 229 (529)
Q Consensus 166 ~~~~~~V~~~sGs-~A~~~~l~all~pGD--------------~Vl~~-~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~ 229 (529)
+. .+|.+++|+ +|+..++.++++||| +|+++ +|.|.++...... .. .+.+....++++
T Consensus 105 ~~--~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~--~~--~~~~~~~~~~~~ 178 (444)
T 3if2_A 105 TS--ENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVE--GQ--HFAAVLPHIDEV 178 (444)
T ss_dssp CG--GGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSS--SC--CEEECCCEEEEE
T ss_pred CH--HHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccc--cc--hhhccCceEEec
Confidence 21 244556665 999999999999998 78876 7777665321100 00 122223466666
Q ss_pred ccCCC----CCCCCHHHHHHH---hhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccc---c
Q 009673 230 RLDES----TGLVDYDMLEKT---AILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLV---A 294 (529)
Q Consensus 230 ~v~~~----~~~iD~d~le~~---i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli---~ 294 (529)
+++++ ++.+|+++|+++ +.+ ++++|+++.++||+ ..+ +++|.++|++||++||+|++|..... .
T Consensus 179 ~~~~~~g~~~~~~d~~~l~~~l~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~ 257 (444)
T 3if2_A 179 THDGEEGFFKYRVDFEALENLPALKEG-RIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIY 257 (444)
T ss_dssp EETTEEEEEEEECCHHHHHTCHHHHTT-CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBC
T ss_pred ccccccCccccCCCHHHHHHHHHhcCC-CceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccccc
Confidence 66642 247999999988 455 78999998888886 566 88899999999999999999754221 1
Q ss_pred ccccCCCCCcccEEEecccccc-cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcC-chH
Q 009673 295 ASVVADPFKYCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS-PEF 372 (529)
Q Consensus 295 ~~~~~~~~~~aDiv~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~-~~~ 372 (529)
.+..+ .....+++++|+||++ +|.|.||++.++ ++.+.+.........+++...+.+ +...++.... ...
T Consensus 258 ~~~~~-~~~~~~i~~~S~sK~~~~G~r~G~~~~~~------~l~~~~~~~~~~~~~~~~~~~~~a-~~~~l~~~~~~~~~ 329 (444)
T 3if2_A 258 SDAHL-NWDNNTILCFSLSKIGLPGMRTGIIVADA------KVIEAVSAMNAVVNLAPTRFGAAI-ATPLVANDRIKQLS 329 (444)
T ss_dssp SCCCC-CCCTTEEEEEESTTTTCGGGCCEEEECCH------HHHHHHHHHHHHHHSSCCCHHHHH-HHHHHHTSHHHHHH
T ss_pred ccccc-cCCCCEEEEechhhccCCCCceEEEEECH------HHHHHHHHHHHhccCCCChHHHHH-HHHHHHcCchhHHH
Confidence 11111 1124679999999974 678889999887 676665443221111222222222 2223332100 011
Q ss_pred HH-HHHHHHHHHHHHHHHHHhc----CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCC--CCCC---
Q 009673 373 KV-YQNKVVSNCRALASRLVEL----GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVP--GDKS--- 442 (529)
Q Consensus 373 ~~-~~~~i~~~a~~l~~~L~~~----G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~P--g~~~--- 442 (529)
.+ ..+.+.++++.+.+.|.+. ++.+..+. ...++|+++...+++..++.+.|.++||.+..+... +...
T Consensus 330 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~ 408 (444)
T 3if2_A 330 DNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPE-GAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDY 408 (444)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCC-BSSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCceEecCC-ccEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCccc
Confidence 12 4456677777888887662 55655432 345677777644567888888899999999654322 1110
Q ss_pred CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 443 ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 443 ~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
+...++|||++.. ++++++++++.|.+++...
T Consensus 409 ~~~~~~iRis~~~------~~e~i~~~l~~l~~~~~~~ 440 (444)
T 3if2_A 409 QHAHECIRMSIAA------DEQTLIDGIKVIGEVVREL 440 (444)
T ss_dssp SGGGSEEEEESSS------CHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCeEEEEEeC------CHHHHHHHHHHHHHHHHHH
Confidence 1123689999763 5899999999999988643
No 113
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.92 E-value=4.8e-23 Score=214.60 Aligned_cols=324 Identities=14% Similarity=0.097 Sum_probs=212.0
Q ss_pred CCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-c
Q 009673 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-L 189 (529)
Q Consensus 111 en~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al-l 189 (529)
...+++++++++...+.+.|.. . .| +...+++ +.+++++|.+. .+...+|++|+..++.++ +
T Consensus 7 ~p~~~~~v~~a~~~~~~~~~~~---~----~g-~~~~~l~----~~la~~~~~~~-----v~~~~ggt~al~~~~~~l~~ 69 (394)
T 1o69_A 7 PPHMGGNELKYIEEVFKSNYIA---P----LG-EFVNRFE----QSVKDYSKSEN-----ALALNSATAALHLALRVAGV 69 (394)
T ss_dssp -----CCHHHHHHHHHHHTTTS---C----TT-HHHHHHH----HHHHHHHCCSE-----EEEESCHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHcCCcc---C----CC-hHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcCC
Confidence 4456788899988877654421 0 12 3344554 67888888742 244566779999999999 9
Q ss_pred CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCCCCC
Q 009673 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPRDFD 267 (529)
Q Consensus 190 ~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~~~d 267 (529)
+|||+|+++++.|.+... .+...|. +++.++++ +++.+|+++|++.+++. ++++|+++++ .+...+
T Consensus 70 ~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~v~~~~~-~G~~~~ 137 (394)
T 1o69_A 70 KQDDIVLASSFTFIASVA--------PICYLKA--KPVFIDCD-ETYNIDVDLLKLAIKECEKKPKALILTHL-YGNAAK 137 (394)
T ss_dssp CTTCEEEEESSSCGGGTH--------HHHHTTC--EEEEECBC-TTSSBCHHHHHHHHHHCSSCCCEEEEECG-GGCCCC
T ss_pred CCCCEEEECCCccHHHHH--------HHHHcCC--EEEEEEeC-CCCCcCHHHHHHHHhcccCCceEEEEECC-CCChhh
Confidence 999999999998866532 2334554 67777776 57889999999999764 6899888752 344789
Q ss_pred HHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcccccCC
Q 009673 268 YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG 347 (529)
Q Consensus 268 ~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~ 347 (529)
+++|.++|+++|++||+|++|..|..+.+.....+..+|+.++|.||.++|+++|+++++++ ++.+.+......+
T Consensus 138 l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~~-----~l~~~l~~~~~~~ 212 (394)
T 1o69_A 138 MDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNK-----EKIEKARFYSTQA 212 (394)
T ss_dssp HHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCH-----HHHHHHHHHTBTC
T ss_pred HHHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECCH-----HHHHHHHHHHHhc
Confidence 99999999999999999999887776544322122357888888899998888999999642 5555543321111
Q ss_pred ------CC--------CCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC---CC-ceEEE
Q 009673 348 ------LQ--------GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS---DN-HLVLV 409 (529)
Q Consensus 348 ------~~--------g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt---~~-~~~~v 409 (529)
.+ +++.....++ +... ..+++..+++.++++++.+.|.+. +.+..+.. .+ +++++
T Consensus 213 ~~~~~~~~~~~~g~~~~~~~~~aa~~----l~~l--~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i 285 (394)
T 1o69_A 213 RENCLHYEHLDYGYNYRLSNVLGAIG----VAQM--EVLEQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRWLSTA 285 (394)
T ss_dssp CCSSSSCCCSSCCCBCBCCHHHHHHH----HHHH--TTHHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCSSEEE
T ss_pred cccCccccccccCcccCcCHHHHHHH----HHHH--HHHHHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeEEEEE
Confidence 11 1222322222 2221 235667888899999999999877 66554311 12 23555
Q ss_pred ccCCC--------------------CCcHHHHHHhHhcCCeEEcCCCCCCCC-CCCCC--------------CeEEEccC
Q 009673 410 DLRPM--------------------GIDGARVEKILDMASITLNKNSVPGDK-SALVP--------------GGIRIGSP 454 (529)
Q Consensus 410 ~~~~~--------------------~i~~~~~~~~L~~~GI~v~~~~~Pg~~-~~~~~--------------~~iRig~~ 454 (529)
.+... +++.+++.+.|.+.||.++.++.|.+. +.+.. .++|+...
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (394)
T 1o69_A 286 LINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSG 365 (394)
T ss_dssp EESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCC
T ss_pred EecchhhccccccccccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCC
Confidence 55421 235677888898999999765433111 11111 34555443
Q ss_pred CCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 455 AMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 455 ~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
..++++|++++++.|++++..
T Consensus 366 ----~~~t~edi~~~~~~l~~~~~~ 386 (394)
T 1o69_A 366 ----TAMSKDDVYEISKLILKSIKA 386 (394)
T ss_dssp ----TTCCHHHHHHHHHHHHHHHC-
T ss_pred ----CCCCHHHHHHHHHHHHHHHhc
Confidence 236699999999999887653
No 114
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.92 E-value=1.4e-23 Score=233.66 Aligned_cols=301 Identities=14% Similarity=0.123 Sum_probs=209.2
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (529)
Q Consensus 153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v 231 (529)
+++.++++||++.. +.+++|+ +||.+++.++++|||+|++..+.|.+++. + .+...|+ +++.++.
T Consensus 178 ~e~~lA~~~gae~~-----i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~-~------~~~l~Ga--~~v~v~~ 243 (730)
T 1c4k_A 178 AEKHAARVYNADKT-----YFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYN-S------ALAMAGG--RPVYLQT 243 (730)
T ss_dssp HHHHHHHHTTCSEE-----EEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHH-H------HTTTTCC--EEEEECE
T ss_pred HHHHHHHHHCCCcE-----EEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHH-H------HHHHCCC--EEEEEeC
Confidence 44788999999852 4568887 99999999999999999999998765532 1 0334565 5555444
Q ss_pred CCCC----CCCCHHHH-----HHHhhhcC-----C----cEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEeccccccc
Q 009673 232 DEST----GLVDYDML-----EKTAILFR-----P----KLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGL 292 (529)
Q Consensus 232 ~~~~----~~iD~d~l-----e~~i~~~~-----p----klIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gl 292 (529)
+.++ +.+|+++| ++++++.. + |+|+++++++.+ ..|+++|+++|+++|++|++|+||+.++
T Consensus 244 ~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn~~G~v~dl~~I~~la~~~g~~livDeAh~~~~ 323 (730)
T 1c4k_A 244 NRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYE 323 (730)
T ss_dssp EECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGG
T ss_pred CccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCCCCCeecCHHHHHHHHHHcCCeEEEEccccccc
Confidence 3222 23688877 88887631 3 888888776544 7899999999999999999999997654
Q ss_pred cccccc--CCCCC----ccc----EEEecccccccCCCC-eEEEeeCCCcch-hHH--HhhhcccccCCCCCCChHHHHH
Q 009673 293 VAASVV--ADPFK----YCD----VVTTTTHKSLRGPRG-GMIFFKKDPVLG-VEL--ESAINNAVFPGLQGGPHNHTIG 358 (529)
Q Consensus 293 i~~~~~--~~~~~----~aD----iv~~S~hK~l~Gprg-G~i~~~~~~~~~-~~l--~~~i~~~~~p~~~g~p~~~~ia 358 (529)
...+.. ..++. ++| ++++|+||+|+|+++ |+++++++.... .++ ..+++........++|+...++
T Consensus 324 ~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~ia 403 (730)
T 1c4k_A 324 QFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYA 403 (730)
T ss_dssp GSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHH
T ss_pred ccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHH
Confidence 433211 12221 577 999999999999986 788777641000 000 1122222112234678888999
Q ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cCcEEecCCC----------------------------------
Q 009673 359 GLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGS---------------------------------- 402 (529)
Q Consensus 359 ala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~--~G~~v~~~gt---------------------------------- 402 (529)
++.+|++.+..++..++.++..++++.+++.|++ .|+.++.+..
T Consensus 404 al~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 483 (730)
T 1c4k_A 404 ALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEG 483 (730)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTT
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhccccc
Confidence 9988888765434577889999999999999988 6888764311
Q ss_pred --CCc--e----EEEcc----------CCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHH
Q 009673 403 --DNH--L----VLVDL----------RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK 464 (529)
Q Consensus 403 --~~~--~----~~v~~----------~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~ 464 (529)
+++ + +++.+ ...++++..+.+.|.++||.+.+. ....+|+.++. |.+++
T Consensus 484 ~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~---------~~~~ir~~~s~----g~t~e 550 (730)
T 1c4k_A 484 YGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKS---------DLNSILFLMTP----AETPA 550 (730)
T ss_dssp CCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEE---------CSSEEEEECCT----TCCHH
T ss_pred cCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEEC---------CCCeEEEEeCC----CCCHH
Confidence 111 1 34444 233678889999998889988542 24679987654 55689
Q ss_pred HHHHHHHHHHHHHHHH
Q 009673 465 EFVAIADFIHEGVEIT 480 (529)
Q Consensus 465 d~~~la~~i~~~~~~~ 480 (529)
|++++++.|.++.+..
T Consensus 551 ~i~~Ll~aL~~i~~~~ 566 (730)
T 1c4k_A 551 KMNNLITQLLQLQRLI 566 (730)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999887644
No 115
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.92 E-value=9.3e-24 Score=221.91 Aligned_cols=307 Identities=14% Similarity=0.096 Sum_probs=204.4
Q ss_pred ChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhh--ccC--CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC
Q 009673 87 DPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLT--NKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFN 162 (529)
Q Consensus 87 d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~--~~y--~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g 162 (529)
..++++.++++..++...++.++++|. +.|++|+..... ..+ ++||.. +....+++| +++++++|
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~a~~n~--~~Vl~A~~~~~~~~~~~~~~~gy~y-----~~~~~~~Le----~~lA~l~g 87 (427)
T 3i16_A 19 VLKLYETAMNDIQNQFKILDDIREFNQ--LKVLNAFQEERISEAHFTNSSGYGY-----GDIGRDSLD----AVYARVFN 87 (427)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTCT-----TCHHHHHHH----HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCH--HHHHHHHHHhchhHHhcCCCCCCCC-----CHHHHHHHH----HHHHHHhC
Confidence 344566667777777788888888886 779999975421 111 223322 223356666 67899999
Q ss_pred CCCCCCceeee--cCChHHHHHHHHHhhcCCCCEEEEcC-CCCCcccccc-cccc--ccccccccceEEEEEcccCCCCC
Q 009673 163 LDENKWGVNVQ--PLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLSHG-FMTP--KRRVSGTSIYFESMPYRLDESTG 236 (529)
Q Consensus 163 ~~~~~~~~~V~--~~sGs~A~~~~l~all~pGD~Vl~~~-~~~~g~~s~g-~~~~--~~~i~~~g~~~~~v~~~v~~~~~ 236 (529)
.+. ..|+ ++||++||..++.++++|||+|++.+ +.|+++.... .... ...+...|. +++.++++ +++
T Consensus 88 ~e~----alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~--~~~~v~~~-~~g 160 (427)
T 3i16_A 88 TES----ALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGI--NYKQVDLK-EDG 160 (427)
T ss_dssp CSE----EEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTC--EEEECCCC-TTS
T ss_pred Ccc----eEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCC--EEEEecCc-cCC
Confidence 986 3343 68999999999999999999999998 7776553100 0000 001222344 67777776 457
Q ss_pred CCCHHHHHHHhhh-cCCcEEEEcC----CCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCCC-ccc
Q 009673 237 LVDYDMLEKTAIL-FRPKLIIAGA----SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-YCD 306 (529)
Q Consensus 237 ~iD~d~le~~i~~-~~pklIi~~~----s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~~-~aD 306 (529)
.+|++++++++++ .++|+|+++. ++||+ ..|+++|+++|++ +|+++++|++|..+... ..|.. ++|
T Consensus 161 ~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~----~~p~~~gaD 236 (427)
T 3i16_A 161 KPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDT----KEPTDVGAD 236 (427)
T ss_dssp SCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSS----SCGGGGTCS
T ss_pred CcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCcccccc----CCccccCCe
Confidence 8999999999983 3899999987 77775 5689999999999 99999999998765421 23333 689
Q ss_pred EEEecccccccC---CCCeEEEeeCCCcchhHHHhhhcccc-cCCCC--CCChHHHHHHHHHHHHHhcCchHHHHHHHHH
Q 009673 307 VVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINNAV-FPGLQ--GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV 380 (529)
Q Consensus 307 iv~~S~hK~l~G---prgG~i~~~~~~~~~~~l~~~i~~~~-~p~~~--g~p~~~~iaala~al~~~~~~~~~~~~~~i~ 380 (529)
++++|+||+++| ++||++++++ ++.+++.... .+++. .+|... +...+++.+ .....++++..
T Consensus 237 iv~~S~sK~lgg~g~~~gG~i~~~~------~li~~l~~~~~~~~~g~~~~~~~~---~a~~~l~gl--~~~~~r~~~~~ 305 (427)
T 3i16_A 237 LIAGSLIKNIGGGIAPTGGYLAGTK------DCIEKTSYRLTVPGIGGECGSTFG---VVRSMYQGL--FLAPHISMEAL 305 (427)
T ss_dssp EEEEETTSGGGTTTCCSCEEEEECH------HHHHHHHHHHSCTTTGGGCCCCTT---CHHHHHHHH--HHHHHHHHHHH
T ss_pred EEEecCcccCCCCCCceEEEEEECH------HHHHHHHHhcccCccCccCCccHH---HHHHHHHHH--HHHHHHHHHHH
Confidence 999999999977 8899999987 7777765522 22221 122111 011122221 12256788999
Q ss_pred HHHHHHHHHHHhcCcEEecCCCCCc-----eEEEccCCCCCcHHHHHHhHhcCC
Q 009673 381 SNCRALASRLVELGYKLVSGGSDNH-----LVLVDLRPMGIDGARVEKILDMAS 429 (529)
Q Consensus 381 ~~a~~l~~~L~~~G~~v~~~gt~~~-----~~~v~~~~~~i~~~~~~~~L~~~G 429 (529)
+|+.++++.|++.|+++.++ .++ +..+.+... .....+.+.|+...
T Consensus 306 ~~a~~la~~L~~~g~~V~p~--~~~~~~~~i~~i~l~~~-~~~~~f~~~l~~~~ 356 (427)
T 3i16_A 306 KGAILCSRIMELAGFEVMPK--YDEKRSDIIQSIKFNDK-DKLIEFCKGIQTGS 356 (427)
T ss_dssp HHHHHHHHHHHHTTCEEESC--TTSCCSSSCEEEECSSH-HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCeecCC--CCCCCccEEEEEEECCH-HHHHHHHHHHhhcC
Confidence 99999999999999988543 334 445555311 11233555565543
No 116
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.92 E-value=2.3e-24 Score=222.17 Aligned_cols=319 Identities=18% Similarity=0.135 Sum_probs=211.7
Q ss_pred EecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH
Q 009673 107 LIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (529)
Q Consensus 107 L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~ 186 (529)
+..+.+++++++++++...+.+.+ |...+...++| +.+++++|.+. .+.++||++|+..++.
T Consensus 7 ~~~~~~~~~~~v~~a~~~~~~~~~---------~~~~~~~~~l~----~~la~~~~~~~-----~~~~~sGt~al~~al~ 68 (367)
T 3nyt_A 7 LKNQQARIKDKIDAGIQRVLRHGQ---------YILGPEVTELE----DRLADFVGAKY-----CISCANGTDALQIVQM 68 (367)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCC---------CSSCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHH
T ss_pred ccccccccCHHHHHHHHHHHhcCC---------ccCChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHH
Confidence 333444567889999887775432 11234455555 77888999873 3567899999999999
Q ss_pred hh-cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCC
Q 009673 187 AI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRD 265 (529)
Q Consensus 187 al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~ 265 (529)
++ ++|||+|+++++.|.+... .+...|. +++.++++++++.+|+++|++.+++ ++++|+.+++ ++..
T Consensus 69 ~~~~~~gd~Vi~~~~~~~~~~~--------~~~~~G~--~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~-~G~~ 136 (367)
T 3nyt_A 69 ALGVGPGDEVITPGFTYVATAE--------TVALLGA--KPVYVDIDPRTYNLDPQLLEAAITP-RTKAIIPVSL-YGQC 136 (367)
T ss_dssp HTTCCTTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCSBCGGGTGGGCCT-TEEEECCBCG-GGCC
T ss_pred HhCCCCcCEEEECCCccHHHHH--------HHHHcCC--EEEEEecCCccCCcCHHHHHHhcCc-CCcEEEeeCC-ccCh
Confidence 99 8999999999988765431 2334454 7788888877789999999999977 8888874432 2347
Q ss_pred CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecc--cccccC-CCCeEEEeeCCCcchhHHHhhhcc
Q 009673 266 FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTT--HKSLRG-PRGGMIFFKKDPVLGVELESAINN 342 (529)
Q Consensus 266 ~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~--hK~l~G-prgG~i~~~~~~~~~~~l~~~i~~ 342 (529)
.|+++|.++|+++|++||+|++|+.|....+..... ..|++++|+ ||++++ +.||+++++++ ++.+++..
T Consensus 137 ~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~--~~di~~~Sf~~~K~l~~~g~gg~~~~~~~-----~l~~~~~~ 209 (367)
T 3nyt_A 137 ADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCN--LSTVACTSFFPSAPLGCYGDGGAIFTNDD-----ELATAIRQ 209 (367)
T ss_dssp CCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETTS--SSSEEEEECCTTSSSCCSSCCEEEEESCH-----HHHHHHHH
T ss_pred hhHHHHHHHHHHcCCEEEEECccccCCeECCeeccC--CCCEEEEECCCCCcCCCcCceeEEEeCCH-----HHHHHHHH
Confidence 899999999999999999999998876643322111 238999996 899966 45799998763 56555443
Q ss_pred cccC-----------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCC----CCceE
Q 009673 343 AVFP-----------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS----DNHLV 407 (529)
Q Consensus 343 ~~~p-----------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt----~~~~~ 407 (529)
.... +.....+... +++ ++..+ ..+++..++..++++++.+.|.+.|+.+..... ..+.+
T Consensus 210 ~~~~g~~~~~~~~~~g~~~~~~~~~-aa~--~~~~l--~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 284 (367)
T 3nyt_A 210 IARHGQDRRYHHIRVGVNSRLDTLQ-AAI--LLPKL--EIFEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQY 284 (367)
T ss_dssp HTBTTEEETTEECSCCCBCCCCHHH-HHH--HHHHH--HTHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSE
T ss_pred HHhcCCCcCceeeccCcCCCccHHH-HHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEE
Confidence 2211 1111112211 111 22222 234566777888889999999887765543211 11223
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCC-CCCC-CCCC-------------CCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSV-PGDK-SALV-------------PGGIRIGSPAMTTRGFSEKEFVAIADF 472 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~-Pg~~-~~~~-------------~~~iRig~~~~tt~g~~~~d~~~la~~ 472 (529)
.+.+. +.+.+.+.|.+.||.++..+. |.+. +++. ...||+++.. .++++|++++++.
T Consensus 285 ~~~~~----~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~----~~t~~~i~~v~~~ 356 (367)
T 3nyt_A 285 TVRMD----NRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHP----YLDTASIKIICAA 356 (367)
T ss_dssp EEECS----SHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCT----TCCHHHHHHHHHH
T ss_pred EEEeC----CHHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCC----CCCHHHHHHHHHH
Confidence 33332 567888999999999876542 3221 1111 2468887653 3669999999998
Q ss_pred HHH
Q 009673 473 IHE 475 (529)
Q Consensus 473 i~~ 475 (529)
|++
T Consensus 357 ~~~ 359 (367)
T 3nyt_A 357 LTN 359 (367)
T ss_dssp HHC
T ss_pred HHH
Confidence 864
No 117
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.91 E-value=2.8e-23 Score=218.46 Aligned_cols=332 Identities=17% Similarity=0.225 Sum_probs=216.8
Q ss_pred eEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673 106 ELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (529)
Q Consensus 106 ~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g-~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~ 182 (529)
+|..+++. .|+.+++++...+...+ |.. .+...+++ +.+++++|.+. + +...+|++|+.
T Consensus 20 ~l~~~~p~~~~p~~~~~a~~~~~~~~~---------y~~~~~~~~~l~----~~la~~~~~~~----v-~~~~ggt~al~ 81 (424)
T 2po3_A 20 PLLVGRPNRIDRARLYERLDRALDSQW---------LSNGGPLVREFE----ERVAGLAGVRH----A-VATCNATAGLQ 81 (424)
T ss_dssp CEETTCCCCCCHHHHHHHHHHHHHHTC---------CSSSCHHHHHHH----HHHHHHHTSSE----E-EEESCHHHHHH
T ss_pred cccccCCCCCChHHHHHHHHHHHhcCC---------cccCCHHHHHHH----HHHHHHhCCCe----E-EEeCCHHHHHH
Confidence 35555653 46789999887775321 222 24445555 67788888752 2 44566679999
Q ss_pred HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (529)
Q Consensus 183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~ 262 (529)
.++.++. +||+|+++++.|.++.. .+...|. +++.++++++++.+|+++|++.+++ ++++|+++++ .
T Consensus 82 ~~l~~l~-~gd~Vlv~~~~~~~~~~--------~~~~~G~--~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~-t 148 (424)
T 2po3_A 82 LLAHAAG-LTGEVIMPSMTFAATPH--------ALRWIGL--TPVFADIDPDTGNLDPDQVAAAVTP-RTSAVVGVHL-W 148 (424)
T ss_dssp HHHHHHT-CCSEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTSSBCHHHHGGGCCT-TEEEEEEECG-G
T ss_pred HHHHHcC-CCCEEEECCCccHHHHH--------HHHHcCC--EEEEEecCCCcCCcCHHHHHHhhCc-CCcEEEEECC-C
Confidence 9999885 89999999998765431 2334554 7777778765788999999999987 7899888642 3
Q ss_pred CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEeccc--ccccCCCCeEEEeeCCCcchhHHHhh
Q 009673 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESA 339 (529)
Q Consensus 263 p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~ 339 (529)
+...++++|.++|+++|++||+|++|..|+...+. ++. ..|++++|+| |+++|+++|+++++++ ++.++
T Consensus 149 G~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~---~~~~~~di~~~S~sk~K~l~~~~~G~~v~~~~-----~l~~~ 220 (424)
T 2po3_A 149 GRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGR---PAGSLGDAEVFSFHATKAVNAFEGGAVVTDDA-----DLAAR 220 (424)
T ss_dssp GCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSCCSSCEEEEESCH-----HHHHH
T ss_pred CCcCCHHHHHHHHHHcCCEEEEECccccCCeECCe---ecccccCEEEEeCCCCCCccCCCCeEEEeCCH-----HHHHH
Confidence 34789999999999999999999998877664332 121 3589999988 8898899999999842 56555
Q ss_pred hcccccCCC--------CCCC-hHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEec-C-CCC-C-c
Q 009673 340 INNAVFPGL--------QGGP-HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS-G-GSD-N-H 405 (529)
Q Consensus 340 i~~~~~p~~--------~g~p-~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~-~-gt~-~-~ 405 (529)
+......+. .|.+ ....+++ +.++... ..++++.++..++++++.+.|.+. |+.+.. + +.. + +
T Consensus 221 l~~~~~~~~~~~~~~~~~g~~~~~~~~~a-a~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~ 297 (424)
T 2po3_A 221 IRALHNFGFDLPGGSPAGGTNAKMSEAAA-AMGLTSL--DAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQ 297 (424)
T ss_dssp HHHHHBTTTTCTTCCTTCCCBCCCCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCC
T ss_pred HHHHHhcCccccccccccCcCCCcCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccE
Confidence 443221111 1111 1112221 1223221 245667788888888888888774 888765 2 211 2 3
Q ss_pred eEEEccCC--CCCcHHHHHHhHhcCCeEEcCCCCCC-CC-CCC-------CC-------CeEEEccCCCccCCCCHHHHH
Q 009673 406 LVLVDLRP--MGIDGARVEKILDMASITLNKNSVPG-DK-SAL-------VP-------GGIRIGSPAMTTRGFSEKEFV 467 (529)
Q Consensus 406 ~~~v~~~~--~~i~~~~~~~~L~~~GI~v~~~~~Pg-~~-~~~-------~~-------~~iRig~~~~tt~g~~~~d~~ 467 (529)
++.+.+.. .+++..++.+.|.++||.+.....|. +. ..+ .+ ..||+++.. .++++|++
T Consensus 298 ~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~----~~t~e~i~ 373 (424)
T 2po3_A 298 YVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGT----AIGDDDIR 373 (424)
T ss_dssp CEEEEECHHHHSSCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCST----TCCHHHHH
T ss_pred EEEEEECCccchhhHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCC----CCCHHHHH
Confidence 33355532 14567788889999999997532211 00 000 01 127777543 35699999
Q ss_pred HHHHHHHHHHHHHHHH
Q 009673 468 AIADFIHEGVEITLEA 483 (529)
Q Consensus 468 ~la~~i~~~~~~~~~~ 483 (529)
++++.|.+++....+.
T Consensus 374 ~~~~~L~~~~~~~~~~ 389 (424)
T 2po3_A 374 RVADLLRLCATRGREL 389 (424)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHH
Confidence 9999999998766544
No 118
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.91 E-value=2.1e-23 Score=224.33 Aligned_cols=331 Identities=12% Similarity=0.036 Sum_probs=212.9
Q ss_pred CcHHHHHHHhhhhhcc---CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhc
Q 009673 114 TSRAVMEAVGSCLTNK---YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL 189 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~---y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all 189 (529)
.|+.+++++...+.+. ...+|+ ......++++.+.+++.+.+|.+.+. .+|.+++|+ +|+..++.+++
T Consensus 107 ~p~~~~~~a~~~l~~~~~~~~~~Y~------~~~G~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~~al~~~~~~l~ 178 (500)
T 3tcm_A 107 FSADSISRAKQILAMIPGRATGAYS------HSQGIHGLRDAIASGIASRDGFPANA--DDIFLTDGASPGVHLMMQLLI 178 (500)
T ss_dssp SCHHHHHHHHHHHTTSTTSCSSSCC------CTTCCHHHHHHHHHHHHHHHSSCCCG--GGEEEESSSHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHcCCCCcCCCcC------CCcChHHHHHHHHHHHHhhcCCCCCc--ccEEEcCCHHHHHHHHHHHHc
Confidence 5677777766665432 112232 22223466666667888777854321 134556665 99999999998
Q ss_pred -CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhc-----CCcEEEEcCCCC
Q 009673 190 -KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-----RPKLIIAGASAY 262 (529)
Q Consensus 190 -~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~-----~pklIi~~~s~~ 262 (529)
+|||+|++++|.|.++.. .+...|. +++.|+++++ ++.+|+++|++.+++. ++++|++..++|
T Consensus 179 ~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~N 248 (500)
T 3tcm_A 179 RNEKDGILVPIPQYPLYSA--------SIALHGG--ALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGN 248 (500)
T ss_dssp CSTTEEEEEEESCCTHHHH--------HHHHTTC--EEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCT
T ss_pred CCCCCEEEEeCCCcHhHHH--------HHHHcCC--EEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCC
Confidence 899999999998865431 3344565 6677777654 4799999999999864 688998888898
Q ss_pred CC--CC---CHHHHHHHHHHhCCEEEEeccccccccccc-ccCCCC----------C-cc-cEEEecccccc---cCCCC
Q 009673 263 PR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS-VVADPF----------K-YC-DVVTTTTHKSL---RGPRG 321 (529)
Q Consensus 263 p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~-~~~~~~----------~-~a-Div~~S~hK~l---~Gprg 321 (529)
|+ .. ++++|.++|+++|+++|+|++|.. +++.+ ....++ . .. .+++.|+||+| +|.|+
T Consensus 249 PtG~~~s~~~l~~i~~la~~~~~~li~Deay~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~ 327 (500)
T 3tcm_A 249 PTGQVLAEENQYDIVKFCKNEGLVLLADEVYQE-NIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRG 327 (500)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCC
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEecCccc-cccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccce
Confidence 87 43 467778889999999999999654 33322 111111 1 11 26778999987 58999
Q ss_pred eEEEe---eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh---------cCchHHHHHHHHHHHHHHHHHH
Q 009673 322 GMIFF---KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA---------QSPEFKVYQNKVVSNCRALASR 389 (529)
Q Consensus 322 G~i~~---~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~---------~~~~~~~~~~~i~~~a~~l~~~ 389 (529)
||+++ ++ ++.+.+...... ..+++....++++.++... ...+..++.+++.++++.+.+.
T Consensus 328 G~~~~~~~~~------~~~~~l~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 399 (500)
T 3tcm_A 328 GYFEITGFSA------PVREQIYKIASV--NLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHA 399 (500)
T ss_dssp EEEEEESCCT------THHHHHHHHHHT--TCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCH------HHHHHHHHHHhc--ccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988 55 566555443211 1233444444444444310 0122356677888899999999
Q ss_pred HHhc-CcEEecCCCCCceEEEccCCC----------CCcHHH--HHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCC
Q 009673 390 LVEL-GYKLVSGGSDNHLVLVDLRPM----------GIDGAR--VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM 456 (529)
Q Consensus 390 L~~~-G~~v~~~gt~~~~~~v~~~~~----------~i~~~~--~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~ 456 (529)
|++. |+.+..+. .+.+.|+++... +.+.+. +.++|++.||.+..+..++. +...++|||++.
T Consensus 400 L~~~~g~~~~~~~-g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~--~~g~~~iRis~~-- 474 (500)
T 3tcm_A 400 FNKLEGITCNEAE-GAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQ--VPGTWHFRCTIL-- 474 (500)
T ss_dssp HHTSTTEECCCCC-BTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCC--CTTCCBEEEESC--
T ss_pred HhcCCCcEEecCC-eEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCC--CCCCCEEEEEEC--
Confidence 9885 88877542 344555444311 122222 45788889999965433321 123568999975
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 457 TTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 457 tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
.++++++++++.|.++++..
T Consensus 475 ----~~~e~i~~~i~~l~~~~~~~ 494 (500)
T 3tcm_A 475 ----PQEDKIPAVISRFTVFHEAF 494 (500)
T ss_dssp ----SCTTTHHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHHHHHHH
Confidence 34689999999998887644
No 119
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.91 E-value=2.8e-23 Score=214.27 Aligned_cols=287 Identities=14% Similarity=0.127 Sum_probs=194.7
Q ss_pred HHHHHHc-CCCCCCCceeeecCCh-HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC
Q 009673 155 KRALAAF-NLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (529)
Q Consensus 155 ~~la~~~-g~~~~~~~~~V~~~sG-s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~ 232 (529)
+.+++++ +++++ +|.+++| ++|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++
T Consensus 70 ~~la~~~~~~~~~----~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~ 135 (375)
T 3op7_A 70 KSVSQLYTGVKPE----QILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD--------IPKSLGA--EVDLWQIE 135 (375)
T ss_dssp HHHHTTSSSCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH--------HHHHTTC--EEEEEEEE
T ss_pred HHHHHHhccCChh----hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEEecc
Confidence 5566666 45554 3444555 599999999999999999999998765431 2334555 55666665
Q ss_pred C-CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCCC--c
Q 009673 233 E-STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--Y 304 (529)
Q Consensus 233 ~-~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~ 304 (529)
+ +++.+|+++|++++++ ++++|++++++||+ ..+ +++|.++|++||+++|+|++|..+ ...+ .+.... .
T Consensus 136 ~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~-~~~~-~~~~~~~~~ 212 (375)
T 3op7_A 136 EENGWLPDLEKLRQLIRP-TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSF-SELD-VPSIIEVYD 212 (375)
T ss_dssp GGGTTEECHHHHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCC-SSSC-CCCHHHHCT
T ss_pred ccCCCCCCHHHHHHhhcc-CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccC-CCchhhhcC
Confidence 3 3467899999999987 89999999888886 667 999999999999999999996542 2221 111111 3
Q ss_pred ccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673 305 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (529)
Q Consensus 305 aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~ 382 (529)
.+++++|+||++ +|.|+|++++++ ++.+.+.........+++..... +...+++.. ....++..+++.++
T Consensus 213 ~~i~~~s~sK~~~~~G~r~G~v~~~~------~l~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~-~~~~~~~~~~~~~~ 284 (375)
T 3op7_A 213 KGIAVNSLSKTYSLPGIRIGWVAANH------QVTDILRDYRDYTMICAGVFDDL-VAQLALAHY-QEILERNRHILEEN 284 (375)
T ss_dssp TEEEEEESSSSSSCGGGCCEEEECCH------HHHHHHTTTGGGTTSCCCHHHHH-HHHHHHHTH-HHHHHHHHHHHHHH
T ss_pred CEEEEeEChhhcCCcccceEEEEeCH------HHHHHHHHHHhhhccCCCcHHHH-HHHHHHhcc-HHHHHHHHHHHHHH
Confidence 458899999997 578889999976 78777765443333333333333 333355532 12335667777888
Q ss_pred HHHHHHHHHh-cCcEEecCCCCCceEEEccCCCCCcHHHHHHh-HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCC
Q 009673 383 CRALASRLVE-LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG 460 (529)
Q Consensus 383 a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~-L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g 460 (529)
++.+.+.|++ .++.+..+. ..++.++.+. .+.+..++.+. |+++||.+..+..++ .++++||++.
T Consensus 285 ~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~~------ 351 (375)
T 3op7_A 285 LAILDQWIEEEPLVSYIRPA-VVSTSFVKIA-VDMPMEDFCLQLLQEHGVLLVPGNRFE-----RDGYVRLGFA------ 351 (375)
T ss_dssp HHHHHHHHHHCTTEEECCCS-SSSCEEEEEC-CSSCHHHHHHHHHHHHCEECEEGGGGT-----CTTEEEECCC------
T ss_pred HHHHHHHHhhCCCceEecCC-CeEEEeEEcC-CCCCHHHHHHHHHHhCCEEEeChhhhC-----CCCeEEEEec------
Confidence 9999999988 477766542 2344555554 24456665554 578999985433221 2679999854
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 009673 461 FSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 461 ~~~~d~~~la~~i~~~~~~ 479 (529)
..++++++.++.|.++++.
T Consensus 352 ~~~~~i~~~l~~l~~~l~~ 370 (375)
T 3op7_A 352 CEQETLIKGLEKLSQFLRR 370 (375)
T ss_dssp SCHHHHHHHHHHHHHHHGG
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 3358899999999887753
No 120
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.91 E-value=3.2e-23 Score=223.50 Aligned_cols=312 Identities=13% Similarity=0.074 Sum_probs=205.7
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC--------------CCCEEEEcCCCCCcccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--------------PHDRIMGLDLPHGGHLS 207 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--------------pGD~Vl~~~~~~~g~~s 207 (529)
..+...++|+.+.+|+++++|.+.+.- ..+.+++||+||..++.++.+ |++.|+++++.|.+..
T Consensus 129 ~~p~~~~le~~~~~~l~~~~g~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~- 206 (511)
T 3vp6_A 129 IAPVFVLMEQITLKKMREIVGWSSKDG-DGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK- 206 (511)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCSSSC-EEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHH-
T ss_pred cCchHHHHHHHHHHHHHHHhCCCCCCC-ceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHH-
Confidence 345678899999999999999984211 234556777999988887654 6789998887765432
Q ss_pred ccccccccccccccceE-EEEEcccCCCCCCCCHHHHHHHhhhcC-----CcEEEEcCCCCCC--CCCHHHHHHHHHHhC
Q 009673 208 HGFMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAGASAYPR--DFDYPRMRQIADAVG 279 (529)
Q Consensus 208 ~g~~~~~~~i~~~g~~~-~~v~~~v~~~~~~iD~d~le~~i~~~~-----pklIi~~~s~~p~--~~d~~~i~~ia~~~g 279 (529)
+.+...|.+. +++.++++ +++.+|+++|++++++.+ |++|+++.+++++ ..|+++|+++|++||
T Consensus 207 -------~~~~~~g~g~~~~~~v~~d-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~ 278 (511)
T 3vp6_A 207 -------KAGAALGFGTDNVILIKCN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYN 278 (511)
T ss_dssp -------HHHHHTTSCGGGEEEECBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHT
T ss_pred -------HHHHHcCCCCCcEEEeecC-CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcC
Confidence 2334455422 45556666 468999999999998632 8888887665554 789999999999999
Q ss_pred CEEEEecccccccccccccCCC---CCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccC---------
Q 009673 280 ALLMMDMAHISGLVAASVVADP---FKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFP--------- 346 (529)
Q Consensus 280 ~~livD~ah~~Gli~~~~~~~~---~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p--------- 346 (529)
+|+++|++|..|.......... +.++|++++++||||.+|.+ |+++++++ ++.........+
T Consensus 279 ~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~-----~~~~~~~~~~~~yl~~~~~~~ 353 (511)
T 3vp6_A 279 LWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK-----GILQGCNQMHASYLFQQDKHY 353 (511)
T ss_dssp CEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST-----THHHHHHCCCCTTTCCSSCSS
T ss_pred CEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCH-----HHHHHHhccCCccccCccccc
Confidence 9999999988776643322111 23679999999999988877 88888774 333322110000
Q ss_pred ---------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecC-CCCCceEEEccCCCC
Q 009673 347 ---------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSG-GSDNHLVLVDLRPMG 415 (529)
Q Consensus 347 ---------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~-gt~~~~~~v~~~~~~ 415 (529)
..+++... ...+++.+++.....+++++.++..++++++.+.|++ .|++++.+ .....++.+.+.+.+
T Consensus 354 ~~~~~~~~~~~~~~r~~-~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~ 432 (511)
T 3vp6_A 354 DVSYDTGDKAIQCGRHV-DIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQS 432 (511)
T ss_dssp CGGGCCGGGSSCSSCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGG
T ss_pred ccccCccCCCCCCCCch-HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCcc
Confidence 01112111 2334455666555567789999999999999999988 49998862 112233444333332
Q ss_pred Cc---------------HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc-CCCccCCCCHHHHHHHHHHHHHHH
Q 009673 416 ID---------------GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS-PAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 416 i~---------------~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~-~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
++ ..++.+.|.+.|+.+.. +.|.. ...+.+|+++ +.. .+++|++++++.|.++-
T Consensus 433 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~-~~~~~---~~~~~lRi~~~~~~----~t~~di~~ll~~i~~~~ 502 (511)
T 3vp6_A 433 LRGVPDSPQRREKLHKVAPKIKALMMESGTTMVG-YQPQG---DKANFFRMVISNPA----ATQSDIDFLIEEIERLG 502 (511)
T ss_dssp GSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEE-EEEET---TEEEEEEECCCCTT----CCHHHHHHHHHHHHHHH
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHhcCCEEEE-EEEeC---CceEEEEEEecCCC----CCHHHHHHHHHHHHHHH
Confidence 21 12467777777754321 11211 1124699987 333 45899999999887754
No 121
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.91 E-value=6.6e-24 Score=219.27 Aligned_cols=330 Identities=12% Similarity=0.075 Sum_probs=220.8
Q ss_pred cCCCCCcHHHHHHHhhhhhccCCCCCCC-CCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeec-C-ChHHHHHHHH
Q 009673 109 ASENFTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-L-SGSPANFEVY 185 (529)
Q Consensus 109 asen~~~~~V~eal~~~l~~~y~~G~p~-~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~-~-sGs~A~~~~l 185 (529)
++..+.|++|+++|...+.+.++.|... ..+..+.++.+.++ .+++.+++++|++.++ +|.+ + +||+++.+++
T Consensus 19 at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~-~ar~~la~ll~~~~~~---evif~t~~~T~a~n~a~ 94 (377)
T 3e77_A 19 YFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIIN-NTENLVRELLAVPDNY---KVIFLQGGGCGQFSAVP 94 (377)
T ss_dssp ECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHH-HHHHHHHHHHTCCTTE---EEEEESSHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHH-HHHHHHHHHhCCCCCC---eEEEEcCchHHHHHHHH
Confidence 3455789999999999887655432211 01233456666666 5789999999997531 2333 4 5669999999
Q ss_pred HhhcCC--CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC-
Q 009673 186 TAILKP--HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY- 262 (529)
Q Consensus 186 ~all~p--GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~- 262 (529)
.+++.+ ||+|++....+ +++.+. +.....| +.++.++++ +++.+++++++..+++ ++++|.+++..+
T Consensus 95 ~~l~~~~~Gd~v~~~~~g~---~~~~~~---~~a~~~G--~~~~~~~~~-~~~~~~~~~~~~~i~~-~t~lV~~~h~et~ 164 (377)
T 3e77_A 95 LNLIGLKAGRCADYVVTGA---WSAKAA---EEAKKFG--TINIVHPKL-GSYTKIPDPSTWNLNP-DASYVYYCANETV 164 (377)
T ss_dssp HHHGGGSTTCEEEECCCSH---HHHHHH---HHHTTTS--EEEECSCCC-SSSCSCCCGGGCCCCT-TCSCEEEESEETT
T ss_pred HhccCCCCCCeEEEEECCH---HHHHHH---HHHHHhC--CceEEeccC-CCcCCCCChHHhccCC-CccEEEEeCccCc
Confidence 999865 99998776543 232221 1122234 355555554 3455677777766766 889888775444
Q ss_pred -CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCc-----chhH
Q 009673 263 -PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPV-----LGVE 335 (529)
Q Consensus 263 -p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~-----~~~~ 335 (529)
+...|+ ||+++|+++++|++|+.|.+..++. ..|++++|.||++ ||.| |+++++++.. ..+.
T Consensus 165 tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~-----~~~~~~~s~~K~~-gp~G~g~l~~~~~~l~~~~~~~p~ 233 (377)
T 3e77_A 165 HGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVS-----KFGVIFAGAQKNV-GSAGVTVVIVRDDLLGFALRECPS 233 (377)
T ss_dssp TTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGG-----GCSEEEEEGGGTT-SCTTCEEEEEETTSCSCCCTTSCG
T ss_pred hheEchh-----hhccCCCEEEEEcccccCCCCCchh-----hcCEEEEeccccc-CCCccEEEEEcHHHHhhccCCCCc
Confidence 457777 5788999999999999887654432 2357899999999 8999 9999998531 0001
Q ss_pred H---HhhhcccccCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCC--CCc-eE
Q 009673 336 L---ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS--DNH-LV 407 (529)
Q Consensus 336 l---~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt--~~~-~~ 407 (529)
+ ....+ .....++|+...++++..|++.+... ++++..++..+.++++.+.|.+. |+.+..... .+. .+
T Consensus 234 ~~~~~~~~~---~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~iv 310 (377)
T 3e77_A 234 VLEYKVQAG---NSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNI 310 (377)
T ss_dssp GGCHHHHHT---TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEE
T ss_pred hhhHHHHhh---cCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEE
Confidence 1 11111 12235799999999999999988766 68889999999999999999985 887543111 112 23
Q ss_pred EEccCCCCCcH-----HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDG-----ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 408 ~v~~~~~~i~~-----~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
.+.+. ++++ ..+...|+++||.+. +|+. ..+++|+|+...+ +++|+++++++|+++++.
T Consensus 311 sf~~~--~~~~~~~~~~~~l~~l~~~Gi~~~----~g~~---~~g~iRiS~~~~~----t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 311 PFRIG--NAKGDDALEKRFLDKALELNMLSL----KGHR---SVGGIRASLYNAV----TIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp EEEES--STTCCHHHHHHHHHHHHHTTEESC----BCCT---TTCSEEEECCTTS----CHHHHHHHHHHHHHHHHH
T ss_pred EEEcC--CCCCchhHHHHHHHHHHHCCcEEe----CCCC---cCCEEEEECCCCC----CHHHHHHHHHHHHHHHHH
Confidence 33333 3322 235566668899974 3432 2467999986554 489999999999988753
No 122
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.91 E-value=9.8e-23 Score=208.73 Aligned_cols=316 Identities=15% Similarity=0.118 Sum_probs=214.9
Q ss_pred hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-H
Q 009673 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (529)
Q Consensus 102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG-s 178 (529)
++.|+|..++|+ +++.|++++...+... .+|+. +...+++ +++++++|++++ +|.+++| +
T Consensus 26 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~-------~~~~~l~----~~la~~~~~~~~----~i~~~~g~t 88 (361)
T 3ftb_A 26 RELLDYSSNINPLGIPKSFLNNIDEGIKNL--GVYPD-------VNYRRLN----KSIENYLKLKDI----GIVLGNGAS 88 (361)
T ss_dssp --CEETTCCCCTTCSCHHHHTTHHHHHHGG--GSCCC-------TTCHHHH----HHHHHHHTCCSC----EEEEESSHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHHh--cCCCC-------ccHHHHH----HHHHHHhCCCcc----eEEEcCCHH
Confidence 356888888775 5899999998777542 23332 1123444 778888898775 3444555 5
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
+|+..++.++ |+|++++|.|.++.. .+...|. +++.+++++ ++.+|++++++.+++ +++|+++
T Consensus 89 ~al~~~~~~~----d~vi~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~-~~~~~~~~l~~~l~~--~~~v~i~ 151 (361)
T 3ftb_A 89 EIIELSISLF----EKILIIVPSYAEYEI--------NAKKHGV--SVVFSYLDE-NMCIDYEDIISKIDD--VDSVIIG 151 (361)
T ss_dssp HHHHHHHTTC----SEEEEEESCCTHHHH--------HHHHTTC--EEEEEECCT-TSCCCHHHHHHHTTT--CSEEEEE
T ss_pred HHHHHHHHHc----CcEEEecCChHHHHH--------HHHHcCC--eEEEeecCc-ccCCCHHHHHHhccC--CCEEEEe
Confidence 8999888887 999999987755421 2334454 666777763 457888999999976 8999999
Q ss_pred CCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-----cccEEEecccccc--cCCCCeEEE-
Q 009673 259 ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-----YCDVVTTTTHKSL--RGPRGGMIF- 325 (529)
Q Consensus 259 ~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-----~aDiv~~S~hK~l--~GprgG~i~- 325 (529)
.++||+ .. ++++|+++|++||+++|+|++|..+ ... ....... ...++++|+||++ +|.|.|+++
T Consensus 152 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~ 229 (361)
T 3ftb_A 152 NPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEF-TGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGIT 229 (361)
T ss_dssp TTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGG-TCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhh-cCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEe
Confidence 888886 44 4777888888999999999997533 221 1111111 2347889999987 577889988
Q ss_pred eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcE-EecCCCC
Q 009673 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK-LVSGGSD 403 (529)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~-v~~~gt~ 403 (529)
.++ ++.+.+.....++ +++....+++..+++. ...+++..+++.++++.+.+.|++. |+. +..+ .
T Consensus 230 ~~~------~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~ 296 (361)
T 3ftb_A 230 NNK------EIAAKIKAKQNPW---NINCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFIKRVFSP--H 296 (361)
T ss_dssp SCH------HHHHHHHTTSCTT---CSCHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECC--S
T ss_pred CCH------HHHHHHHhhCCCC---CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCC--C
Confidence 555 7777776543322 3444455554445542 1334777888899999999999885 777 5543 2
Q ss_pred CceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 404 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 404 ~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
..++++++.. .+..++.+.|.+.||.+..+... ++..++.+||++. +++|++++.+.|+++.+
T Consensus 297 ~~~~~~~~~~--~~~~~l~~~l~~~gi~v~~g~~~---~~~~~~~iRis~~-------~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 297 ANFVLCRLEN--ISGEKLYDSLLKEDIVIRRCCNF---IGLDDSFVRFAIK-------DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp SSEEEEEESS--SCHHHHHHHHHTTTEECEECTTS---TTCCTTEEEEECC-------CHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCC--CCHHHHHHHHHHCCeEEeeCccC---CCCCCCEEEEEcC-------CHHHHHHHHHHHHHHHh
Confidence 3456676653 46778888888889998643322 2234678999964 47889999999887654
No 123
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.91 E-value=2.2e-23 Score=214.50 Aligned_cols=328 Identities=11% Similarity=0.036 Sum_probs=220.4
Q ss_pred cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCC---CCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeee--cCCh
Q 009673 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKR---YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ--PLSG 177 (529)
Q Consensus 103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r---~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~--~~sG 177 (529)
+.+++.++..++|++|+++|...+.+.++. +.+- .+.+.++.+.++ .+++.+++++|++.+. +|. +.+|
T Consensus 5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~~~--~~s~~~~~hr~~~~~~~~~-~~r~~la~ll~~~~~~---~v~f~t~~~ 78 (361)
T 3m5u_A 5 RKINFSAGPSTLPLEILEQAQKELCDYQGR--GYSIMEISHRTKVFEEVHF-GAQEKAKKLYELNDDY---EVLFLQGGA 78 (361)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGGGS--SSCGGGSCSSSHHHHHHHH-HHHHHHHHHHTCCTTE---EEEEESSHH
T ss_pred ceEeecCCCCCCcHHHHHHHHHHHHhcccC--CceeeccCCCCHHHHHHHH-HHHHHHHHHhCCCCCc---eEEEEcCcH
Confidence 567889999999999999999888654432 2221 123455666666 5789999999997431 233 3445
Q ss_pred HHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC-CCCHHHHHHHhhhcCCcEEE
Q 009673 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG-LVDYDMLEKTAILFRPKLII 256 (529)
Q Consensus 178 s~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~-~iD~d~le~~i~~~~pklIi 256 (529)
|+++.+++.+++ +||+++..... +++|.+.. .....|. ++..++++.+.. .++++. + +++ ++++|.
T Consensus 79 T~a~n~~~~~~~-~~~~~~~i~~~---~~~~~~~~---~a~~~G~--~v~~~~~~~~g~~~~~~~~-~--l~~-~t~lv~ 145 (361)
T 3m5u_A 79 SLQFAMIPMNLA-LNGVCEYANTG---VWTKKAIK---EAQILGV--NVKTVASSEESNFDHIPRV-E--FSD-NADYAY 145 (361)
T ss_dssp HHHHHHHHHHHC-CSSCEEEEECS---HHHHHHHH---HHHHTTC--CEEEEEECTTTTSCSCCCC-C--CCT-TSSEEE
T ss_pred HHHHHHHHHhcC-CCCeEEEEeCC---HHHHHHHH---HHHHcCC--ceEEEecccCcCCCcCChh-h--cCC-CCCEEE
Confidence 699999999998 89976443322 23332211 1122344 444555553321 156665 3 766 899988
Q ss_pred EcCCCC--CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcch
Q 009673 257 AGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG 333 (529)
Q Consensus 257 ~~~s~~--p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~ 333 (529)
+.+..+ +...|. |++ +|+++++|++|++|.+..++ ...|++++|.||++ ||.| |++++++
T Consensus 146 ~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~-----~~~d~~~~s~~K~~-gp~G~g~l~~~~----- 208 (361)
T 3m5u_A 146 ICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVDF-----SNIALFYGGVQKNA-GISGLSCIFIRK----- 208 (361)
T ss_dssp EESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCCC-----TTEEEEEEETTTTS-SCTTCEEEEEEH-----
T ss_pred EeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCCc-----ccCCEEEEechhcc-CCCccEEEEEcH-----
Confidence 875544 334441 344 49999999999988764433 24799999999999 8999 9999998
Q ss_pred hHHHhhhccc------------ccCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcC-c-EEe
Q 009673 334 VELESAINNA------------VFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-Y-KLV 398 (529)
Q Consensus 334 ~~l~~~i~~~------------~~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G-~-~v~ 398 (529)
++.+++... ......++|+...+.++..|++.+... ++++..++..+.++++.+.|.+.+ + .+.
T Consensus 209 -~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~ 287 (361)
T 3m5u_A 209 -DMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGH 287 (361)
T ss_dssp -HHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEES
T ss_pred -HHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeecc
Confidence 444333210 011234789999999999999988877 689999999999999999999866 5 554
Q ss_pred cCC--CCCceEEEccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 399 SGG--SDNHLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 399 ~~g--t~~~~~~v~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
.+. ...+.+.+.+.. .+++ ..+...|+++||.+.. |+. ..+++|+|+..++ +++|+++++++|++
T Consensus 288 ~~~~~rs~~ivsf~~~~~~~~~-~~~~~~L~~~gI~~~~----g~~---~~g~iRiS~~~~~----t~edId~l~~al~~ 355 (361)
T 3m5u_A 288 ADKKDRSLMNVSFNIAKNKDLE-PLFVKEAEEAGMIGLK----GHR---ILGGIRASIYNAL----NLDQVKTLCEFMKE 355 (361)
T ss_dssp SCGGGBCSSEEEEEESSCTTHH-HHHHHHHHHTTEECCB----CCT---TTCSEEEECCTTS----CHHHHHHHHHHHHH
T ss_pred CCHHHcCCeEEEEECCCchhhh-HHHHHHHHHCCCEEec----CCC---ccCeEEEEccCCC----CHHHHHHHHHHHHH
Confidence 321 112333444432 2334 4577888999999743 322 1357999987654 48999999999998
Q ss_pred HHHH
Q 009673 476 GVEI 479 (529)
Q Consensus 476 ~~~~ 479 (529)
+.+.
T Consensus 356 ~~~~ 359 (361)
T 3m5u_A 356 FQGK 359 (361)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8753
No 124
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.91 E-value=4.6e-23 Score=215.70 Aligned_cols=326 Identities=11% Similarity=0.076 Sum_probs=203.9
Q ss_pred cceeEecCC------C-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC
Q 009673 103 KSLELIASE------N-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL 175 (529)
Q Consensus 103 ~~i~L~ase------n-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~ 175 (529)
+.|+|..++ . .+++.|.+++....... ..+|+. ..| ..++++...+++....+.+.. .+|.++
T Consensus 38 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~Y~~---~~g---~~~lr~~la~~~~~~~~~~~~---~~i~~t 107 (413)
T 3t18_A 38 AVINAALGTLLDDKGKIIALPSVYDRLDEMDRSH-IASYAP---IEG---EKDYRKIVIDTLFGPYKPEGY---ISAIAT 107 (413)
T ss_dssp GCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHH-HHSCCC---TTC---CHHHHHHHHHHHHGGGCCSSE---EEEEEE
T ss_pred ceEeccccCccCCCCCcCChHHHHHHHHhcCccc-ccCcCC---CCC---CHHHHHHHHHHHhcccCcccc---CcEEEc
Confidence 568887664 2 36889999887543211 113322 112 234444444556555554311 245556
Q ss_pred ChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc---C
Q 009673 176 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---R 251 (529)
Q Consensus 176 sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~---~ 251 (529)
+|+ +|+..++.++++|||+|++++|.|.++.. .+...|. +++.++++.+++.+|+++|++.+++. +
T Consensus 108 ~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 177 (413)
T 3t18_A 108 PGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRK--------ICEEFGR--NFKTFEFFTDDFAFNIDVYKEAIDEGIRDS 177 (413)
T ss_dssp SHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHH--------HHHHHTC--EEEEECCBCTTSSBCHHHHHHHHHHHHHHC
T ss_pred CccHHHHHHHHHHhcCCCCEEEECCCCcccHHH--------HHHHhCC--eEEEeeccCCCCCcCHHHHHHHHHHHhhcC
Confidence 666 99999999999999999999997765421 2334554 66777774455799999999998763 6
Q ss_pred Cc-EEEEcCC-CCCC--CCCHHH---HHHHHH------HhCCEEEEecccccccccccccCCCC-C-----ccc---EEE
Q 009673 252 PK-LIIAGAS-AYPR--DFDYPR---MRQIAD------AVGALLMMDMAHISGLVAASVVADPF-K-----YCD---VVT 309 (529)
Q Consensus 252 pk-lIi~~~s-~~p~--~~d~~~---i~~ia~------~~g~~livD~ah~~Gli~~~~~~~~~-~-----~aD---iv~ 309 (529)
++ ++++++| +||+ ..+.++ |+++|+ +||++||+|++| .++...+....++ . ..+ +++
T Consensus 178 ~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 256 (413)
T 3t18_A 178 DRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAY-LEFAGDGDQQRKFFEKFSNLPRNLFVVVA 256 (413)
T ss_dssp SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTT-GGGSSSSSTTTGGGGGGTTCCTTEEEEEE
T ss_pred CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEeccc-ccccCChhhHHHHHHHHhhcCCCeeEEEE
Confidence 77 7888888 8886 556554 555566 899999999995 4555443211111 1 112 778
Q ss_pred ecccccc--cCCCCeEEEe---eCCCcchhHHHhhhcccccC---CCCCCChHHHHHHHHHHHHHhc----CchHHHHHH
Q 009673 310 TTTHKSL--RGPRGGMIFF---KKDPVLGVELESAINNAVFP---GLQGGPHNHTIGGLAVCLKHAQ----SPEFKVYQN 377 (529)
Q Consensus 310 ~S~hK~l--~GprgG~i~~---~~~~~~~~~l~~~i~~~~~p---~~~g~p~~~~iaala~al~~~~----~~~~~~~~~ 377 (529)
+|+||++ +|+|.||+++ ++ ++.+.+...... +...+++....+++..+++... ....++..+
T Consensus 257 ~S~sK~~~~~G~riG~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 330 (413)
T 3t18_A 257 FSMSKSHTAYGLRSGAAVGISSSK------EIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRN 330 (413)
T ss_dssp EEHHHHTTCGGGCCEEEEEEESCH------HHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred EecCccCCCcCcCcEEEEEecCCH------HHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 9999986 6888899998 55 666655432110 0011223333333333332210 012245667
Q ss_pred HHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCc
Q 009673 378 KVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMT 457 (529)
Q Consensus 378 ~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~t 457 (529)
++.++++.+.+.|++.|+++..+. .+.+.|+++. +..++.+.|.++||.+. || ++++||++...+
T Consensus 331 ~~~~~~~~l~~~l~~~g~~~~~~~-~~~~~~~~~~----~~~~~~~~l~~~gv~v~----~g------~~~iRis~~~~~ 395 (413)
T 3t18_A 331 MLKSRADVFVTAAKENKLTMIPYF-GGFFTFIPTD----KAFDIVKDLEKENIFTI----PS------AKGIRVAICGVG 395 (413)
T ss_dssp HHHHHHHHHHHHHHHTTCCCBCCC-SSSCEEEECS----CHHHHHHHHHHTTEECE----EC------SSEEEECTTTSC
T ss_pred HHHHHHHHHHHHHHHcCCCccCCC-ceEEEEeCCC----CHHHHHHHHHhCCEEEe----cC------CCceEEEEeeCC
Confidence 788888999999998888876542 3455666652 56778788899999984 33 478999976444
Q ss_pred cCCCCHHHHHHHHHHHHHHHH
Q 009673 458 TRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 458 t~g~~~~d~~~la~~i~~~~~ 478 (529)
++++ ++.|.++++
T Consensus 396 -----~~~~---l~~l~~~l~ 408 (413)
T 3t18_A 396 -----EEKI---PKLVQRLAF 408 (413)
T ss_dssp -----GGGH---HHHHHHHHH
T ss_pred -----HHHH---HHHHHHHHH
Confidence 3444 555555554
No 125
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.91 E-value=3.3e-23 Score=211.52 Aligned_cols=323 Identities=13% Similarity=0.102 Sum_probs=207.6
Q ss_pred ceeEecCC-CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673 104 SLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (529)
Q Consensus 104 ~i~L~ase-n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~ 182 (529)
.|++..+. ..+++.|++++...+.. |..+ |+..+... .+++++++++| ... ..+.+++|++|+.
T Consensus 9 ~id~~~~~~~~~~~~v~~a~~~~~~~-~~~~------~~~~~~~~----~l~~~la~~~g-~~~---~v~~~~~gt~a~~ 73 (356)
T 1v72_A 9 ALGFSSDNIAGASPEVAQALVKHSSG-QAGP------YGTDELTA----QVKRKFCEIFE-RDV---EVFLVPTGTAANA 73 (356)
T ss_dssp CCBCSCGGGCCCCHHHHHHHHHTTSS-CCCS------TTCSHHHH----HHHHHHHHHHT-SCC---EEEEESCHHHHHH
T ss_pred eEeeccCCccCCCHHHHHHHHhhccC-cccc------cccchHHH----HHHHHHHHHhC-CCC---cEEEeCCccHHHH
Confidence 45554432 24689999999876521 2111 32233333 34588899999 321 1245577889999
Q ss_pred HHHHhhcCCCCEEEEcCCCCCccccccccccccccccc--cceEEEEEcccCCCCCCCCHHHHHH-Hhhhc------CCc
Q 009673 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT--SIYFESMPYRLDESTGLVDYDMLEK-TAILF------RPK 253 (529)
Q Consensus 183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~--g~~~~~v~~~v~~~~~~iD~d~le~-~i~~~------~pk 253 (529)
.++.++++|||+|++.++.|.+.+..+ .+... |. +++.++.+ ++.+|+++|++ .+++. +++
T Consensus 74 ~al~~~~~~gd~vi~~~~~~~~~~~~~------~~~~~~~g~--~~~~v~~~--~~~~d~~~l~~~~i~~~~~~~~~~~~ 143 (356)
T 1v72_A 74 LCLSAMTPPWGNIYCHPASHINNDECG------APEFFSNGA--KLMTVDGP--AAKLDIVRLRERTREKVGDVHTTQPA 143 (356)
T ss_dssp HHHHTSCCTTEEEEECTTSHHHHSSTT------HHHHHTTSC--EEEECCCG--GGCCCHHHHHHHTTSSTTCTTSCEEE
T ss_pred HHHHHhcCCCCEEEEcCccchhhhhch------HHHHHhCCc--EEEEecCC--CCeEcHHHHHHHhhhcchhhccCCce
Confidence 999999999999999988765433210 02233 54 66666654 47899999999 88752 578
Q ss_pred EEEEcCCCCCC----CCCHHHHHHHHHHhCCEEEEecccccccc-cccccCCCC---CcccEEEecccccccCCCC-eEE
Q 009673 254 LIIAGASAYPR----DFDYPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF---KYCDVVTTTTHKSLRGPRG-GMI 324 (529)
Q Consensus 254 lIi~~~s~~p~----~~d~~~i~~ia~~~g~~livD~ah~~Gli-~~~~~~~~~---~~aDiv~~S~hK~l~Gprg-G~i 324 (529)
+|+++++++.+ ..++++|.++|++||++||+|++|..+.. ..+..+..+ .++|++++|+||+ .+|.| |++
T Consensus 144 ~v~~~~~~~tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~ 222 (356)
T 1v72_A 144 CVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIV 222 (356)
T ss_dssp EEEEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEE
T ss_pred EEEEEcCCCCCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEE
Confidence 88888765543 23588999999999999999999764321 122222222 1578999999999 55666 688
Q ss_pred EeeCCCcchhHHHhhhcccc-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCC
Q 009673 325 FFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGS 402 (529)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt 402 (529)
++++ ++.+++.... ..+....+. ..+ ...+++.+....+.+..+++.++++++.+.|++ .|+++..+ .
T Consensus 223 ~~~~------~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~ 292 (356)
T 1v72_A 223 LFNT------SLATEMSYRRKRAGHLSSKM--RFL-SAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGG-T 292 (356)
T ss_dssp ESSG------GGHHHHHHHHHHTTCCCSST--HHH-HHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESC-C
T ss_pred EECH------HHHhhHHHHhhccCchhhhH--HHH-HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccC-C
Confidence 8876 4555443211 111111111 122 222344444334566778888899999999988 58887654 2
Q ss_pred CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 403 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 403 ~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
..+++++++. .++.+.|.++||.+..+ . +.++.+||+++.. .+++|++++++.|+++++.
T Consensus 293 ~~~~~~~~~~------~~~~~~l~~~gi~v~~g----~---~~~~~iRi~~~~~----~~~~~i~~~~~~l~~~l~~ 352 (356)
T 1v72_A 293 EANILFCRLD------SAMIDALLKAGFGFYHD----R---WGPNVVRFVTSFA----TTAEDVDHLLNQVRLAADR 352 (356)
T ss_dssp CSSEEEEEEC------HHHHHHHHHTTCBCBCS----S---SSTTEEEEECCTT----CCHHHHHHHHHHHHHTC--
T ss_pred CccEEEEEcC------HHHHHHHHhcCeEEecc----c---cCCCeEEEEecCC----CCHHHHHHHHHHHHHHHHh
Confidence 3456676653 35777778889998543 2 1257899986543 4589999999999887653
No 126
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.91 E-value=8.4e-24 Score=216.67 Aligned_cols=330 Identities=12% Similarity=0.061 Sum_probs=207.8
Q ss_pred hhcceeEecCCCCC--cHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673 101 QFKSLELIASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (529)
Q Consensus 101 ~~~~i~L~asen~~--~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs 178 (529)
+...+.+..++|++ +|.|++++...+... .|+..+...+++ +++++++|.+. .+.+++|+
T Consensus 12 ~~~~~~~~~~~~~~g~~p~v~~ai~~~~~~~---------~~~~~~~~~~l~----~~la~~~~~~~-----~i~~~~g~ 73 (359)
T 3pj0_A 12 KTPYKLGGNGPRNVGVLTEALQNIDDNLESD---------IYGNGAVIEDFE----TKIAKILGKQS-----AVFFPSGT 73 (359)
T ss_dssp TCSEESSSSSCCBHHHHHHHTTTSCTTCBCC---------BTTBSHHHHHHH----HHHHHHHTCSE-----EEEESCHH
T ss_pred hcchhhcCCCccccCCCHHHHHHHHhhcccC---------cccCCHHHHHHH----HHHHHHhCCCc-----EEEeCCHH
Confidence 34566777888886 899999987643211 133334455555 77888999875 24558999
Q ss_pred HHHHHHHHhhcCCCCE--EEEcCCCCCcccccccccccccc-ccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673 179 PANFEVYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (529)
Q Consensus 179 ~A~~~~l~all~pGD~--Vl~~~~~~~g~~s~g~~~~~~~i-~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklI 255 (529)
+|+..++.+++++||+ |++..+.|....... .+ ...|. +++.++. +++.+|+++|++. .+ ++++|
T Consensus 74 ~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~------~~~~~~g~--~~~~v~~--~~~~~d~~~l~~~-~~-~~~~v 141 (359)
T 3pj0_A 74 MAQQIALRIWADRKENRRVAYHPLSHLEIHEQD------GLKELQQI--TPLLLGT--ANQLLTIDDIKSL-RE-PVSSV 141 (359)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTT------HHHHHHCC--EEEECSC--TTSCCCHHHHHTC-SS-CCSEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEeccceeeehhcc------hHHHhcCc--eEEecCC--cCCCcCHHHHHhc-cC-CceEE
Confidence 9999999999999997 444433322111100 11 22343 6667665 4678999999988 44 89999
Q ss_pred EEcCCCCCC---CCCHH---HHHHHHHHhCCEEEEeccccccccc-ccccCCCC-CcccEEEecccccccCCCCeEEEee
Q 009673 256 IAGASAYPR---DFDYP---RMRQIADAVGALLMMDMAHISGLVA-ASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFK 327 (529)
Q Consensus 256 i~~~s~~p~---~~d~~---~i~~ia~~~g~~livD~ah~~Gli~-~~~~~~~~-~~aDiv~~S~hK~l~GprgG~i~~~ 327 (529)
++++++||+ ..+.+ +|.++|++||++||+|++|..+... .+.....+ .++|+++.|+||++.||.||+++.+
T Consensus 142 ~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~ 221 (359)
T 3pj0_A 142 LIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAGAILAGN 221 (359)
T ss_dssp EEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSSCEEEEEC
T ss_pred EEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcceEEEECC
Confidence 998776543 45544 5599999999999999987654321 11111111 2578999999999988877888887
Q ss_pred CCCcchhHHHhhhccc--ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCC
Q 009673 328 KDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDN 404 (529)
Q Consensus 328 ~~~~~~~~l~~~i~~~--~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~ 404 (529)
+ ++.+++... .+.+..........+++ .+++... +..+++.++++++.+.|++. |+.+.......
T Consensus 222 ~------~l~~~~~~~~~~~~~~~~~~~~~~~a~~-~~l~~~~-----~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 289 (359)
T 3pj0_A 222 D------DFVQEAKIWKRRYGGDLISLYPYILSAD-YYFEKRI-----GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVS 289 (359)
T ss_dssp H------HHHHHHHHHHHHTTCCCSCCHHHHHHHH-HHHHHHG-----GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSS
T ss_pred H------HHHHHHHHHHHHhCCCcchhHHHHHHHH-HHHHHHH-----HHhHHHHHHHHHHHHHHhhCCCceeeccCCcc
Confidence 7 677666532 11111112222233333 3454332 33456678889999999985 88885322345
Q ss_pred ceEEEccCCCC-CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 405 HLVLVDLRPMG-IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 405 ~~~~v~~~~~~-i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
+++++++...+ .+..++.+.|.++||.+..+..++. ...+.+|+++..-. ...+.+++++.++.|.++
T Consensus 290 ~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~---~~~~~~r~~i~~~~-~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 290 NMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKS---ADVCAFEVSVGDAF-AEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp SEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEE---TTEEEEEEECCTTG-GGSCHHHHHHHHHHHHHH
T ss_pred eEEEEEecCccchhHHHHHHHHHhcCcEecCCccccC---CCceEEEEEecCcc-ccCCHHHHHHHHHHHHhc
Confidence 66777765321 2346788889999999965432211 12457898653211 125678888888877654
No 127
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.91 E-value=2.5e-23 Score=219.13 Aligned_cols=339 Identities=14% Similarity=0.140 Sum_probs=208.0
Q ss_pred cceeEecCCC--CCcHHHHHHHhhhhhccCC-CCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYS-EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (529)
Q Consensus 103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~-~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs- 178 (529)
+.|+|..++. .+++.|++++...+..... .|+. . |+......++++.+.+++.+.++++++ +|.+++|+
T Consensus 57 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~--~-y~~~~g~~~l~~~ia~~~~~~~~~~~~----~i~~t~G~~ 129 (432)
T 3ei9_A 57 QVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYS--G-YGAEQGAKPLRAAIAKTFYGGLGIGDD----DVFVSDGAK 129 (432)
T ss_dssp CCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCC--C-CCCTTCCHHHHHHHHHHHHTTTTCCGG----GEEEESCHH
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCcc--C-CCCCCCCHHHHHHHHHHHHccCCCCcc----eEEECCChH
Confidence 4688877765 3689999999887753111 1111 1 222223356665555666554566654 45567777
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc----------eEEEEEcccCCC-CCCCCHHHHHHHh
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI----------YFESMPYRLDES-TGLVDYDMLEKTA 247 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~----------~~~~v~~~v~~~-~~~iD~d~le~~i 247 (529)
+++. ++.++++|||+|++.+|.|.++... +...|. +.+++.++++.+ ++..|+++
T Consensus 130 ~al~-~l~~l~~~gd~Vl~~~p~y~~~~~~--------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----- 195 (432)
T 3ei9_A 130 CDIS-RLQVMFGSNVTIAVQDPSYPAYVDS--------SVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST----- 195 (432)
T ss_dssp HHHH-HHHHHHCTTCCEEEEESCCTHHHHH--------HHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----
T ss_pred HHHH-HHHHHcCCCCEEEEeCCCCHHHHHH--------HHHcCCcccccccccccCceEEeccCcccCCcCChhh-----
Confidence 6665 4688899999999999988765321 111121 013445555432 34555432
Q ss_pred hhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCC--CC---cccEEEecccccc-
Q 009673 248 ILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FK---YCDVVTTTTHKSL- 316 (529)
Q Consensus 248 ~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~--~~---~aDiv~~S~hK~l- 316 (529)
. .++++|++++++||+ .. ++++|+++|++||++||+|++|..+ +..+..... +. ..+++++|+||++
T Consensus 196 ~-~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 273 (432)
T 3ei9_A 196 V-GRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMY-MSDDNPRSIFEIPGAEEVAMETASFSNYAG 273 (432)
T ss_dssp C-CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGG-CCSSCCSSGGGSTTGGGTEEEEEESHHHHC
T ss_pred C-CCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhh-ccCCCCCChhhcCCCCCeEEEEecchhccC
Confidence 2 378999998899987 44 4677888899999999999997643 322211111 11 3458999999987
Q ss_pred -cCCCCeEEEeeCCCc--chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc
Q 009673 317 -RGPRGGMIFFKKDPV--LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (529)
Q Consensus 317 -~GprgG~i~~~~~~~--~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~ 393 (529)
+|+|.|+++++++.. ....+.+.+........ ++++....++...++........++..+++.++++.+.+.|.+.
T Consensus 274 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 352 (432)
T 3ei9_A 274 FTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCF-NGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL 352 (432)
T ss_dssp TTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSC-CCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcccceEEEEEChHHhhcchHHHHHHHHHHhcccc-CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 788889999988420 00001333332211111 22333333333334432111345778888999999999999988
Q ss_pred CcEEecCCCCCceEEEccCCCCCcHHHH-HHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHH
Q 009673 394 GYKLVSGGSDNHLVLVDLRPMGIDGARV-EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 472 (529)
Q Consensus 394 G~~v~~~gt~~~~~~v~~~~~~i~~~~~-~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~ 472 (529)
|+.+..+ ..++++|+++. +.+..++ ..+++++||.+..+..++ +..++++||++. .+++++++.++.
T Consensus 353 g~~~~~~-~~~~~~~~~~~--~~~~~~~~~~ll~~~gv~v~~g~~f~---~~~~~~iRis~~------~~~e~l~~~l~r 420 (432)
T 3ei9_A 353 GYDVYGG-KNAPYVWVHFP--NQSSWDVFAEILEKTHVVTTPGSGFG---PGGEGFVRVSAF------GHRENILEACRR 420 (432)
T ss_dssp TCCEEEC-SSSSEEEEECT--TSCHHHHHHHHHHHHCEECEEGGGGC---GGGTTEEEEECC------SCHHHHHHHHHH
T ss_pred CceecCC-CcceEEEEECC--CCCHHHHHHHHHHHCCEEEeCchHhC---CCCCCEEEEEec------CCHHHHHHHHHH
Confidence 9887754 23566788886 4455554 555677899986543332 224678999952 358898888888
Q ss_pred HHHHH
Q 009673 473 IHEGV 477 (529)
Q Consensus 473 i~~~~ 477 (529)
|++-.
T Consensus 421 l~~~~ 425 (432)
T 3ei9_A 421 FKQLY 425 (432)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87543
No 128
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.91 E-value=2.9e-23 Score=218.44 Aligned_cols=335 Identities=14% Similarity=0.097 Sum_probs=218.5
Q ss_pred hcceeEecCCC-C--CcHHH--HHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc-CCCCCCCceeeecC
Q 009673 102 FKSLELIASEN-F--TSRAV--MEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-NLDENKWGVNVQPL 175 (529)
Q Consensus 102 ~~~i~L~asen-~--~~~~V--~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~-g~~~~~~~~~V~~~ 175 (529)
.+.|+|..+++ . .++.+ ++++...+......+|+. .....++++...+++.+.+ +++++++ ..|.++
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~~-~~i~~t 119 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAP------PQGIEELRDLWQQKMLRDNPELSIDNM-SRPIVT 119 (430)
T ss_dssp TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCC------TTCCHHHHHHHHHHHHHHCTTCCGGGB-CCCEEE
T ss_pred CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCC------CCCCHHHHHHHHHHHhccCcccCCCcc-ceEEEc
Confidence 45688887776 3 35656 777766553211123332 1112455544444444432 5555421 014556
Q ss_pred ChH-HHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccc-ccceEEEEEcccCCCCCCCCHHHHHHHhhhc--C
Q 009673 176 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSG-TSIYFESMPYRLDESTGLVDYDMLEKTAILF--R 251 (529)
Q Consensus 176 sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~-~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~--~ 251 (529)
+|+ +|+..++.++++|||+|++++|.|.++.. .+.. .|. +++.++++++++.+|+++|++.+++. +
T Consensus 120 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 189 (430)
T 2x5f_A 120 NALTHGLSLVGDLFVNQDDTILLPEHNWGNYKL--------VFNTRNGA--NLQTYPIFDKDGHYTTDSLVEALQSYNKD 189 (430)
T ss_dssp SHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHTTTTCC--EEEEECCBCTTSCBCSHHHHHHHHHCCSS
T ss_pred CCchHHHHHHHHHHhCCCCEEEEcCCcCccHHH--------HHHHhcCC--eEEEEeccCccCCcCHHHHHHHHHhcCCC
Confidence 665 99999999999999999999998765431 2233 454 66677776434689999999999763 6
Q ss_pred CcEEEEcCCCCCC--CCC---HHHHHHHHHH-----hCCEEEEecccccccccccc-cCC---CC---Ccc---cEEEec
Q 009673 252 PKLIIAGASAYPR--DFD---YPRMRQIADA-----VGALLMMDMAHISGLVAASV-VAD---PF---KYC---DVVTTT 311 (529)
Q Consensus 252 pklIi~~~s~~p~--~~d---~~~i~~ia~~-----~g~~livD~ah~~Gli~~~~-~~~---~~---~~a---Div~~S 311 (529)
+++|+++.|+||+ ..+ +++|.++|++ +|+++|+|++|.. +...+. ... .+ ... +++++|
T Consensus 190 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 268 (430)
T 2x5f_A 190 KVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYG-LFYEDVYTQSLFTALTNLHSNAILPIRLDG 268 (430)
T ss_dssp EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTT-CBCSSSCCSCHHHHHHTTCCTTEEEEEEEE
T ss_pred CEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhccc-ccCCcccchHHHHHHhhccCCcceEEEEEe
Confidence 7888888889886 556 8899999999 9999999999653 332221 111 11 123 578899
Q ss_pred ccccc--cCCCCeEEEe---eCCCcchhHHHhhhcccccC----CCCCCChHHHHHHHHHHHH-Hhc-CchHHHHHHHHH
Q 009673 312 THKSL--RGPRGGMIFF---KKDPVLGVELESAINNAVFP----GLQGGPHNHTIGGLAVCLK-HAQ-SPEFKVYQNKVV 380 (529)
Q Consensus 312 ~hK~l--~GprgG~i~~---~~~~~~~~~l~~~i~~~~~p----~~~g~p~~~~iaala~al~-~~~-~~~~~~~~~~i~ 380 (529)
+||++ +|.|.|++++ ++ ++.+.+...... .. .+++....+++..+|+ ... .....+..+++.
T Consensus 269 ~sK~~~~~G~riG~~~~~~~~~------~~~~~l~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 341 (430)
T 2x5f_A 269 ATKEFFAWGFRVGFMTFGTSDQ------TTKEVLEAKVKGLIRSNI-SSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLK 341 (430)
T ss_dssp HHHHTTCGGGCCEEEEEBCCCH------HHHHHHHHHHHHHHHTTT-SSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCCeEEEEEecCCH------HHHHHHHHHHhhhhhccc-CCCChHHHHHHHHHHccChHHHHHHHHHHHHHH
Confidence 99997 6778899999 66 666665432211 22 2334444444445565 310 011233778888
Q ss_pred HHHHHHHHHHH----hcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhc-CCeEEcCCCCCCCCCCCCCCeEEEccCC
Q 009673 381 SNCRALASRLV----ELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPA 455 (529)
Q Consensus 381 ~~a~~l~~~L~----~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~-~GI~v~~~~~Pg~~~~~~~~~iRig~~~ 455 (529)
++++.+.+.|+ +.|+.+..+. .+.++++++. +.+..++.+.|.+ +||.+. || .++++||++..
T Consensus 342 ~~~~~l~~~L~~~~~~~g~~~~~~~-~g~~~~~~~~--~~~~~~~~~~l~~~~gi~v~----~g-----~~~~iRis~~~ 409 (430)
T 2x5f_A 342 ERYEVTKEVVYADQYHSHWQAYDFN-SGYFMAIKVH--DVDPEALRKHLIDKYSIGVI----AL-----NATDIRIAFSC 409 (430)
T ss_dssp HHHHHHHHHHTCGGGTTTEEECCCC-BSSEEEEEES--SSCHHHHHHHHHHHHCEECE----EC-----SSSEEEEEGGG
T ss_pred HHHHHHHHHHHhhCCCCCceeeCCC-ceEEEEeCCC--CCCHHHHHHHHHHhCCEEEe----cC-----CCCeEEEEEec
Confidence 88999999998 5678776542 2455777775 5577777777766 999984 33 25789999763
Q ss_pred CccCCCCHHHHHHHHHHHHHHHH
Q 009673 456 MTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 456 ~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.++++++++++.|+++++
T Consensus 410 -----~~~e~i~~~~~~l~~~l~ 427 (430)
T 2x5f_A 410 -----VEKDDIPHVFDSIAKAID 427 (430)
T ss_dssp -----SCGGGHHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHHHHH
Confidence 247899999999998875
No 129
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.91 E-value=9.1e-23 Score=209.56 Aligned_cols=276 Identities=16% Similarity=0.126 Sum_probs=189.2
Q ss_pred HHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCC-CEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673 154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (529)
Q Consensus 154 ~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v 231 (529)
++.+++++|++++ +|.+++|+ +++..++.++++|| |+|++++|.|.++.. .+...|. +++.+++
T Consensus 64 r~~la~~~~~~~~----~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~ 129 (356)
T 1fg7_A 64 IENYAQYAGVKPE----QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSV--------SAETIGV--ECRTVPT 129 (356)
T ss_dssp HHHHHHHHTSCGG----GEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHH--------HHHHHTC--EEEECCC
T ss_pred HHHHHHHhCCChH----HEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHH--------HHHHcCC--EEEEeeC
Confidence 3677888898864 45567776 99999999999999 999999988765421 2233454 6677777
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHH---HHHHHhCCEEEEecccccccccccccCCCCC--c
Q 009673 232 DESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMR---QIADAVGALLMMDMAHISGLVAASVVADPFK--Y 304 (529)
Q Consensus 232 ~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~---~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~ 304 (529)
+ +++.+|++++++.++ ++++|++++++||+ ..+.+++. ++|+ +|+++|+|++|....-...... ..+ .
T Consensus 130 ~-~~~~~d~~~l~~~i~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~-~~~~~~ 204 (356)
T 1fg7_A 130 L-DNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAG-WLAEYP 204 (356)
T ss_dssp C-TTSCCCHHHHHTSCT--TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGG-GTTTCT
T ss_pred C-CCCCCCHHHHHHHhc--CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHH-HHhhCC
Confidence 6 457899999999886 78999999899886 56655554 5555 8999999999763321111111 011 3
Q ss_pred ccEEEecccccc--cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673 305 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (529)
Q Consensus 305 aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~ 382 (529)
.++++.|+||++ +|+|.|++++++ ++.+.+.....+. + ++....++...+|+......+++..+++.++
T Consensus 205 ~~i~~~s~sK~~g~~G~r~G~~~~~~------~~~~~l~~~~~~~--~-~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 275 (356)
T 1fg7_A 205 HLAILRTLSKAFALAGLRCGFTLANE------EVINLLMKVIAPY--P-LSTPVADIAAQALSPQGIVAMRERVAQIIAE 275 (356)
T ss_dssp TEEEEEESSSTTCCGGGCCEEEEECH------HHHHHHHHHSCSS--C-SCHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred CEEEEecchHhhcCchhhhEEEEeCH------HHHHHHHHhcCCC--C-CCHHHHHHHHHHhcCccHHHHHHHHHHHHHH
Confidence 568999999987 688899999977 6777766543332 2 2333333333344331101156777888899
Q ss_pred HHHHHHHHHhcC--cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcC-CCCCCCCCCCCCCeEEEccCCCccC
Q 009673 383 CRALASRLVELG--YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNK-NSVPGDKSALVPGGIRIGSPAMTTR 459 (529)
Q Consensus 383 a~~l~~~L~~~G--~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~-~~~Pg~~~~~~~~~iRig~~~~tt~ 459 (529)
++++.+.|++.| +.+..+ ..+++++++. +..++.+.|.++||.+.. +..+| .++++||++.
T Consensus 276 ~~~l~~~L~~~~~~~~~~~~--~~~~~~~~~~----~~~~l~~~L~~~gI~v~~~g~~~~-----~~~~iRis~~----- 339 (356)
T 1fg7_A 276 REYLIAALKEIPCVEQVFDS--ETNYILARFK----ASSAVFKSLWDQGIILRDQNKQPS-----LSGCLRITVG----- 339 (356)
T ss_dssp HHHHHHHHHHSTTEEEECCC--SSSEEEEEET----THHHHHHHHHHTTEECEECTTSTT-----CTTEEEEECC-----
T ss_pred HHHHHHHHHhCCCceEECCC--CCeEEEEECC----CHHHHHHHHHHCCEEEEECCCCCC-----CCCeEEEEeC-----
Confidence 999999999865 333332 3456677764 567788888899999965 32222 2468999964
Q ss_pred CCCHHHHHHHHHHHHH
Q 009673 460 GFSEKEFVAIADFIHE 475 (529)
Q Consensus 460 g~~~~d~~~la~~i~~ 475 (529)
+++|++++++.|++
T Consensus 340 --~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 340 --TREESQRVIDALRA 353 (356)
T ss_dssp --CHHHHHHHHHHHHT
T ss_pred --CHHHHHHHHHHHHh
Confidence 37899999988865
No 130
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.91 E-value=1.6e-24 Score=224.87 Aligned_cols=334 Identities=13% Similarity=0.060 Sum_probs=211.1
Q ss_pred ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCC-CCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeee-cCChHHHH
Q 009673 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ-PLSGSPAN 181 (529)
Q Consensus 104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~-~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~-~~sGs~A~ 181 (529)
...+.++..++|++|+++|...+.+.+..|... .-+..+.++.+.++ .+++.+++++|++.+. -.+. ..+||+++
T Consensus 28 ~yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~-~ar~~la~ll~~~~~~--evif~t~~~T~a~ 104 (386)
T 3qm2_A 28 VFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAE-EAEQDFRDLLNIPSNY--KVLFCHGGGRGQF 104 (386)
T ss_dssp CEECCSSSCCCCHHHHHHHTCC-----------------------CCH-HHHHHHHHHHTCCTTE--EEEEEESCTTHHH
T ss_pred CccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHH-HHHHHHHHHhCCCCCc--eEEEEcCCchHHH
Confidence 456678888999999999998876544322110 01122344444555 5789999999996421 1133 35677999
Q ss_pred HHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-CCCCC-CCHHHHHHHhhhcCCcEEEEcC
Q 009673 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGL-VDYDMLEKTAILFRPKLIIAGA 259 (529)
Q Consensus 182 ~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-~~~~~-iD~d~le~~i~~~~pklIi~~~ 259 (529)
.+++.+++++||+|++....+ ++|.+.. .....| .+.. ++++ ++.+. +|++++++.+++ ++++|.+.+
T Consensus 105 n~ai~~l~~~gd~v~~~~~~~---~~~~~~~---~a~~~G-~v~~--v~~~~~~~G~~~~~~~~~~~l~~-~t~lV~~~h 174 (386)
T 3qm2_A 105 AGVPLNLLGDKTTADYVDAGY---WAASAIK---EAKKYC-APQI--IDAKITVDGKRAVKPMREWQLSD-NAAYLHYCP 174 (386)
T ss_dssp HHHHHHHCTTCCEEEEEESSH---HHHHHHH---HHTTTS-EEEE--EECEEEETTEEEECCGGGCCCCT-TCSCEEECS
T ss_pred HHHHHhccCCCCeEEEEeCCH---HHHHHHH---HHHHhC-CeEE--EecCcccCCCCCCchHHHhhcCC-CCcEEEEEC
Confidence 999999999999988765433 3332211 112234 3344 3443 11343 778888888876 899988875
Q ss_pred CCC--CCC-CCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchhH
Q 009673 260 SAY--PRD-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVE 335 (529)
Q Consensus 260 s~~--p~~-~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~ 335 (529)
..+ +.. .|+++|. +|+++++|++|+.|.++.++. ..|++++|.||++ ||.| |+++++++
T Consensus 175 ~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~-----~~~~~~~s~hK~l-GP~G~g~l~v~~~------ 237 (386)
T 3qm2_A 175 NETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVS-----RYGVIYAGAQKNI-GPAGLTLVIVRED------ 237 (386)
T ss_dssp EETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGG-----GCSEEEEETTTTT-CCTTEEEEEEEGG------
T ss_pred CcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCcc-----ccCEEEEeccccc-CCCccEEEEECHH------
Confidence 544 454 7888875 799999999999887654432 2357889999999 8999 99999984
Q ss_pred HHhhhccc-----------ccCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcCcEEe-cC-C
Q 009673 336 LESAINNA-----------VFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGYKLV-SG-G 401 (529)
Q Consensus 336 l~~~i~~~-----------~~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G~~v~-~~-g 401 (529)
+.+++... ......++|+...++++..|++.+... ++++..++..+.++++.+.|.+.|+... .+ .
T Consensus 238 ~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~ 317 (386)
T 3qm2_A 238 LLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQA 317 (386)
T ss_dssp GCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGG
T ss_pred HHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHH
Confidence 22111100 011124688888999999999988766 6788889999999999999988776322 11 1
Q ss_pred -CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 402 -SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 402 -t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
.....+.+.+...+++ ..+...|+++||.+.. |+. ..+++|+|+...+ +++|+++++++|+++.+.
T Consensus 318 ~rs~~iv~f~~~~~~~~-~~~~~~L~~~gI~~~~----g~~---~~~~iRiS~~~~~----t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 318 NRSRMNVPFQLADNTLD-KVFLEESFAAGLHALK----GHR---VVGGMRASIYNAM----PIEGVKALTDFMIDFERR 384 (386)
T ss_dssp GBCSSEEEEEESSGGGH-HHHHHHHHHTTEECCB----CCT---TTCSEEEECCTTS----CHHHHHHHHHHHHHHHHH
T ss_pred HcCceEEEEECCCcccc-HHHHHHHHHCCCEEeC----CCC---CcCeEEEEcCCCC----CHHHHHHHHHHHHHHHHh
Confidence 1122344445432344 4566668899999743 322 1356999986554 489999999999987653
No 131
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.91 E-value=8.4e-24 Score=216.59 Aligned_cols=326 Identities=12% Similarity=0.084 Sum_probs=213.1
Q ss_pred ceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCC----CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC-h-
Q 009673 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG----GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-G- 177 (529)
Q Consensus 104 ~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~----g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s-G- 177 (529)
.+++.+++..+|+.|++++...+.+ +. .++...|. ... ..++.+.+++++++++|++..+ +|.+++ +
T Consensus 4 ~~~~~~g~~~~p~~v~~a~~~~~~~-~~--~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~g~~~~~---~v~~~~g~g 76 (360)
T 1w23_A 4 VFNFNAGPSALPKPALERAQKELLN-FN--DTQMSVMELSHRSQS-YEEVHEQAQNLLRELLQIPNDY---QILFLQGGA 76 (360)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSS-ST--TSSSCGGGSCTTSHH-HHHHHHHHHHHHHHHHTCCTTE---EEEEESSHH
T ss_pred eEeecCCCcCCCHHHHHHHHHHhhh-hc--cccccccccCCCCHH-HHHHHHHHHHHHHHHhCCCCCc---eEEEECCcc
Confidence 4677788888999999999987743 21 11111111 112 2233334668999999997321 333444 3
Q ss_pred HHHHHHHHHhhcCC---CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHH-HhhhcCCc
Q 009673 178 SPANFEVYTAILKP---HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEK-TAILFRPK 253 (529)
Q Consensus 178 s~A~~~~l~all~p---GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~-~i~~~~pk 253 (529)
++|+.+++.+++.+ ||.|+++.+.|.. . ..+...| +++.++++++++.+|++++++ .+++ ++|
T Consensus 77 t~al~~~~~~l~~~~~~g~~vi~~~~~~~~-----~----~~~~~~g---~~~~v~~~~~~~~~d~~~l~~~~i~~-~~k 143 (360)
T 1w23_A 77 SLQFTMLPMNLLTKGTIGNYVLTGSWSEKA-----L----KEAKLLG---ETHIAASTKANSYQSIPDFSEFQLNE-NDA 143 (360)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEECSHHHHHH-----H----HHHHTTS---EEEEEEECGGGTSCSCCCGGGCCCCT-TEE
T ss_pred hHHHHHHHHHhcCCCCcccEEEecchhHHH-----H----HHHHHhC---CeEEeecccccCcCCccchHhhccCC-CCC
Confidence 68999999999866 5556654432211 0 0122334 455666664355689999988 8866 899
Q ss_pred EEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCC
Q 009673 254 LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDP 330 (529)
Q Consensus 254 lIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~ 330 (529)
+|++++++||+ ..+ +|+++||++||+|++|..|.... ++...|++++|+||+++ |.| |++++++
T Consensus 144 ~v~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~~~-----~~~~~di~~~s~sK~~~-~~G~G~~~~~~-- 210 (360)
T 1w23_A 144 YLHITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSRPL-----KVNQFGMIYAGAQKNLG-PSGVTVVIVKK-- 210 (360)
T ss_dssp EEEEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSSCC-----CGGGCSEEEEETTTTTS-CTTCEEEEEEH--
T ss_pred EEEEeCCCCCcceecc-----cccccCCceEEEechhhcCCCCc-----CcccCCEEEEEcccccC-CCCcEEEEEcH--
Confidence 99998887776 444 33348999999999987764321 22223899999999884 666 9999987
Q ss_pred cchhHHHhhhcccc-----------cCCCCCCChHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhcC-c-E
Q 009673 331 VLGVELESAINNAV-----------FPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-Y-K 396 (529)
Q Consensus 331 ~~~~~l~~~i~~~~-----------~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~~a~~l~~~L~~~G-~-~ 396 (529)
++.+++.... .....++++...++++..+++.+... ++++..+++.++++++.+.|++.+ + .
T Consensus 211 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 286 (360)
T 1w23_A 211 ----DLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYV 286 (360)
T ss_dssp ----HHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSE
T ss_pred ----HHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCccc
Confidence 5655554321 01223567777777777777765433 467888999999999999998865 5 5
Q ss_pred Eec-CC-CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHH
Q 009673 397 LVS-GG-SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 474 (529)
Q Consensus 397 v~~-~g-t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~ 474 (529)
+.. +. ..++++++++.. +.+..++.+.|.+.||.+. ||.. .+++|||++...+ +++|++++++.|+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~~~----~~~~---~~~~iRis~~~~~----~~~~i~~~~~~l~ 354 (360)
T 1w23_A 287 GHAEKGSRSLMNVTFNLRN-EELNQQFLAKAKEQGFVGL----NGHR---SVGGCRASIYNAV----PIDACIALRELMI 354 (360)
T ss_dssp ESSCGGGBCSSEEEEECSS-HHHHHHHHHHHHHTTEESC----BCCT---TTCSEEEECCTTS----CHHHHHHHHHHHH
T ss_pred ccCCchhccCcEEEEEcCC-CccHHHHHHHHHHCCeeee----cCCC---CCCeEEEEecCCC----CHHHHHHHHHHHH
Confidence 431 21 123466776642 2234556677888999983 4432 2578999986543 5899999999998
Q ss_pred HHHH
Q 009673 475 EGVE 478 (529)
Q Consensus 475 ~~~~ 478 (529)
++++
T Consensus 355 ~~~~ 358 (360)
T 1w23_A 355 QFKE 358 (360)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8765
No 132
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.91 E-value=1e-22 Score=209.46 Aligned_cols=318 Identities=14% Similarity=0.069 Sum_probs=207.9
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~ 179 (529)
..|+|..+++. +++.+++++...+.. ..+|+. ....+++ +.+++++|++++ +|.+++|+ +
T Consensus 25 ~~idl~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~-------~~~~~l~----~~la~~~~~~~~----~v~~~~g~~~ 87 (364)
T 1lc5_A 25 QLLDFSANINPLGMPVSVKRALIDNLDC--IERYPD-------ADYFHLH----QALARHHQVPAS----WILAGNGETE 87 (364)
T ss_dssp GSEECSSCCCTTCCCHHHHHHHHHTGGG--GGSCCC-------TTCHHHH----HHHHHHHTSCGG----GEEEESSHHH
T ss_pred ceEEeccccCCCCCCHHHHHHHHHHHHH--hhcCCC-------CCHHHHH----HHHHHHHCcCHH----HEEECCCHHH
Confidence 46888877764 689999999877643 123322 1123444 677888898764 34446654 9
Q ss_pred HHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 009673 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG 258 (529)
Q Consensus 180 A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklIi~~ 258 (529)
++..++.++ +||+|++.+|.|.++.. .+...|. +++.++++++ ++.+ ++++.+.+++ ++++|+++
T Consensus 88 al~~~~~~~--~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~-l~~~~~~~~~-~~~~v~i~ 153 (364)
T 1lc5_A 88 SIFTVASGL--KPRRAMIVTPGFAEYGR--------ALAQSGC--EIRRWSLREADGWQL-TDAILEALTP-DLDCLFLC 153 (364)
T ss_dssp HHHHHHHHH--CCSEEEEEESCCTHHHH--------HHHHTTC--EEEEEECCGGGTTCC-CTTHHHHCCT-TCCEEEEE
T ss_pred HHHHHHHHc--CCCeEEEeCCCcHHHHH--------HHHHcCC--eEEEEeCCcccccch-hHHHHHhccC-CCCEEEEe
Confidence 999888888 78999999988765421 2233454 5666666532 2333 4656556654 78998888
Q ss_pred CCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCC-CC--cccEEEecccccc--cCCCCeEEE-ee
Q 009673 259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP-FK--YCDVVTTTTHKSL--RGPRGGMIF-FK 327 (529)
Q Consensus 259 ~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~-~~--~aDiv~~S~hK~l--~GprgG~i~-~~ 327 (529)
.++||+ ..+ +++|.++|+++|+++|+|++|..+. ..+..... ++ ..+++++|+||++ +|.|.|+++ .+
T Consensus 154 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 232 (364)
T 1lc5_A 154 TPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFI-PHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD 232 (364)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGS-TTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhc-cCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECC
Confidence 888886 556 8999999999999999999975432 21111011 11 4678999999997 577889999 77
Q ss_pred CCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCce
Q 009673 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHL 406 (529)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~ 406 (529)
+ ++.+.+.....++ +++....+++..+++. ...+++..+++.++++.+.+.|++. |+.+..+ ...+
T Consensus 233 ~------~~~~~l~~~~~~~---~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~g~~ 299 (364)
T 1lc5_A 233 D------AAMARMRRQQMPW---SVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLTVYPG--RANY 299 (364)
T ss_dssp H------HHHHHHHHHSCTT---CSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCC--SSSE
T ss_pred H------HHHHHHHHhCCCC---CCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCC--CCeE
Confidence 6 6777665443221 2333344444334432 1234677788888999999999885 8887643 2445
Q ss_pred EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 407 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 407 ~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+++++.. +..++.+.|.++||.+..+... +...++++||++. +++|++++.+.|+++++
T Consensus 300 ~~~~~~~---~~~~l~~~l~~~gi~v~~g~~~---~~~~~~~iRis~~-------~~~~~~~l~~~l~~~~~ 358 (364)
T 1lc5_A 300 LLLRCER---EDIDLQRRLLTQRILIRSCANY---PGLDSRYYRVAIR-------SAAQNERLLAALRNVLT 358 (364)
T ss_dssp EEEEESC---TTCCHHHHHHTTTEECEECTTS---TTCCTTEEEEECC-------CHHHHHHHHHHHHHHC-
T ss_pred EEEECCC---cHHHHHHHHHHCCcEEeeCccc---CCCCCCEEEEEeC-------CHHHHHHHHHHHHHHhh
Confidence 6666642 2335667777889998543211 1123578999953 37899999999988765
No 133
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.91 E-value=1.6e-22 Score=210.10 Aligned_cols=316 Identities=16% Similarity=0.157 Sum_probs=210.4
Q ss_pred cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh
Q 009673 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (529)
Q Consensus 109 asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al 188 (529)
.+...+++++++++...+.+.+ |+ ..+...+++ +.+++++|.+. .|.+++|++|+..++.++
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~~~--------~~-~~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~a~~~al~~~ 69 (390)
T 3b8x_A 8 LASSTWDDLEYKAIQSVLDSKM--------FT-MGEYVKQYE----TQFAKTFGSKY-----AVMVSSGSTANLLMIAAL 69 (390)
T ss_dssp SCCCCCCHHHHHHHHHHHHHTC--------CS-SCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHcCC--------CC-CChHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHH
Confidence 3566789999999988875421 11 234445555 67888999873 466799999999999998
Q ss_pred -------cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC-C
Q 009673 189 -------LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA-S 260 (529)
Q Consensus 189 -------l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~-s 260 (529)
++|||+|++++++|.+... .+...|. +++.++++++++.+|+++|++.+++ ++++|++++ +
T Consensus 70 ~~~~~~~~~~g~~Vi~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~ 138 (390)
T 3b8x_A 70 FFTKKPRLKKGDEIIVPAVSWSTTYY--------PLQQYGL--RVKFVDIDINTLNIDIESLKEAVTD-STKAILTVNLL 138 (390)
T ss_dssp TSSSSCSCCTTCEEEEESSSCHHHHH--------HHHHTTC--EEEEECBCTTTCSBCHHHHHHHCCT-TEEEEEEECGG
T ss_pred HhhhhcCCCCcCEEEECCCCcHHHHH--------HHHHcCC--EEEEEecCccccCcCHHHHHHHhCc-CCeEEEEECCc
Confidence 8899999999998765432 2334454 7777888766689999999999987 889888863 3
Q ss_pred CCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecc--cccccCCCCeEEEeeCCCcchhHHHh
Q 009673 261 AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTT--HKSLRGPRGGMIFFKKDPVLGVELES 338 (529)
Q Consensus 261 ~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~--hK~l~GprgG~i~~~~~~~~~~~l~~ 338 (529)
++ ..|+++|.++|+++|+++|+|++|+.|....+ ..... ..|+.++|+ +|.+.+++||+++++++ ++.+
T Consensus 139 g~--~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~g~-~~~~~~~s~~~~k~~~~g~gG~~~~~~~-----~l~~ 209 (390)
T 3b8x_A 139 GN--PNNFDEINKIIGGRDIILLEDNCESMGATFNN-KCAGT-FGLMGTFSSFYSNHIATMEGGCIVTDDE-----EIYH 209 (390)
T ss_dssp GC--CCCHHHHHHHHTTSCCEEEEECTTCTTCEETT-EETTS-SSSEEEEECCTTSSSCSSSCEEEEESCH-----HHHH
T ss_pred cC--hhhHHHHHHHHHHcCCEEEEECcCcccCEECC-ccccc-ccceEEEEccCCCCCccCCceEEEeCCH-----HHHH
Confidence 33 58999999999999999999999988876522 11110 235555443 45566678899999873 3433
Q ss_pred hhccccc------------------------------CCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 009673 339 AINNAVF------------------------------PGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA 387 (529)
Q Consensus 339 ~i~~~~~------------------------------p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~ 387 (529)
++..... .+. .+++.....++++ +++ .+++..++..++++++.
T Consensus 210 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~-~l~-----~l~~~~~~~~~~~~~l~ 283 (390)
T 3b8x_A 210 ILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIE-QLK-----KLPRFISVRRKNAEYFL 283 (390)
T ss_dssp HHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHH-HHH-----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHH-HHH-----HHHHHHHHHHHHHHHHH
Confidence 3221100 010 1133444444333 232 34567788888999999
Q ss_pred HHHHhc-CcEEecCCCC-C-ceEEEccCC-CCCcHHHHHHhHhcCCeEEcCCCCCCCC--C-CC-C--------------
Q 009673 388 SRLVEL-GYKLVSGGSD-N-HLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDK--S-AL-V-------------- 445 (529)
Q Consensus 388 ~~L~~~-G~~v~~~gt~-~-~~~~v~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg~~--~-~~-~-------------- 445 (529)
+.|.+. |+.+..+... + +.+.+.+.. .+.+.+++.+.|.+.||.++.. .|+.. . +. .
T Consensus 284 ~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (390)
T 3b8x_A 284 DKFKDHPYLDVQQETGESSWFGFSFIIKKDSGVIRKQLVENLNSAGIECRPI-VTGNFLKNTDVLKYFDYTVHNNVDNAE 362 (390)
T ss_dssp HHHTTCSSEEECCCCSBCCCCEEEEEECTTSCCCHHHHHHHHHHTTBCCBCS-TTSSGGGCHHHHTTCEEEESSCCHHHH
T ss_pred HHhcCCCCcccCCCCCCcccEEEEEEecCcCcccHHHHHHHHHHCCCCeeee-cCCchhhcchhhhcCCCCCcCCChHHH
Confidence 999874 7877643211 2 224444432 1457788999999999998753 22211 1 10 0
Q ss_pred ---CCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673 446 ---PGGIRIGSPAMTTRGFSEKEFVAIADFI 473 (529)
Q Consensus 446 ---~~~iRig~~~~tt~g~~~~d~~~la~~i 473 (529)
.+.|||++... ++++|++++++.|
T Consensus 363 ~~~~~~l~l~~~~~----~t~~di~~i~~~l 389 (390)
T 3b8x_A 363 YLDKNGLFVGNHQI----ELFDEIDYLREVL 389 (390)
T ss_dssp HHHHHEEEEECCSS----CCHHHHHHHHHHT
T ss_pred HHhcCEEEeeCCCC----CCHHHHHHHHHhh
Confidence 13599987654 5699999999876
No 134
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.90 E-value=7.4e-23 Score=220.00 Aligned_cols=333 Identities=11% Similarity=0.006 Sum_probs=212.1
Q ss_pred CCCCcHHHHHHHhhhhhccC---CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC-CCCCCCceeeecCChH-HHHHHHH
Q 009673 111 ENFTSRAVMEAVGSCLTNKY---SEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGS-PANFEVY 185 (529)
Q Consensus 111 en~~~~~V~eal~~~l~~~y---~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g-~~~~~~~~~V~~~sGs-~A~~~~l 185 (529)
.+..|..+.+++...+.... ..+|+. .....++++.+.+++.+.+| ++.+. .+|.+++|+ +|+..++
T Consensus 99 ~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~------~~G~~~lr~~ia~~~~~~~gG~~~~~--~~i~~t~G~~~ai~~~~ 170 (498)
T 3ihj_A 99 SPSFPEDAKKRARRILQACGGNSLGSYSA------SQGVNCIREDVAAYITRRDGGVPADP--DNIYLTTGASDGISTIL 170 (498)
T ss_dssp CSSSCHHHHHHHHHHHHHC----------------CCSCHHHHHHHHHHHHHHTTTCCCCG--GGEEEESSHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHhccCCCCCCCCC------CCCHHHHHHHHHHHHHHhcCCCCCCc--ccEEEcCCHHHHHHHHH
Confidence 33456666777665554321 112322 12234566666678888875 54221 245567776 9999999
Q ss_pred HhhcCCCC----EEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhc----CCcEEE
Q 009673 186 TAILKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF----RPKLII 256 (529)
Q Consensus 186 ~all~pGD----~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~----~pklIi 256 (529)
.+++++|| +|++++|.|.++. ..+...|. ++++|+++++ +|.+|+++|++.+++. ++++|+
T Consensus 171 ~~l~~~gd~~~d~Vlv~~p~y~~~~--------~~~~~~g~--~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~ 240 (498)
T 3ihj_A 171 KILVSGGGKSRTGVMIPIPQYPLYS--------AVISELDA--IQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLC 240 (498)
T ss_dssp HHHCCCCGGGSEEEEEEESCCTHHH--------HHHHHTTC--EEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEE
T ss_pred HHHcCCCCCCCCEEEEeCCCchhHH--------HHHHHcCC--EEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEE
Confidence 99999986 9999999876542 13344554 6777777654 4789999999999874 489998
Q ss_pred EcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccc-cCCCCCc------------c-cEEEecccccc-
Q 009673 257 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFKY------------C-DVVTTTTHKSL- 316 (529)
Q Consensus 257 ~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~~~~~~------------a-Div~~S~hK~l- 316 (529)
+++++||+ .. ++++|.++|++||++||+|++|.. +++.+. ...++.. . -+++.|+||++
T Consensus 241 l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 319 (498)
T 3ihj_A 241 IINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQD-NVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYM 319 (498)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTT
T ss_pred EECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccc-cccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccc
Confidence 88899987 33 477899999999999999999643 343321 1112110 1 16778999998
Q ss_pred --cCCCCeEEEe---eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHH----------hcCchHHHHHHHHHH
Q 009673 317 --RGPRGGMIFF---KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH----------AQSPEFKVYQNKVVS 381 (529)
Q Consensus 317 --~GprgG~i~~---~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~----------~~~~~~~~~~~~i~~ 381 (529)
+|.|+||++. ++ ++.+.+....... . .++....++++.++.. .. .+.....+++.+
T Consensus 320 G~~G~R~G~~~~~~~~~------~l~~~l~~~~~~~-~-~~~~~~q~a~~~~l~~~~~g~~~~~~~~-~~~~~~~~~l~~ 390 (498)
T 3ihj_A 320 GECGYRGGYMEVINLHP------EIKGQLVKLLSVR-L-CPPVSGQAAMDIVVNPPVAGEESFEQFS-REKESVLGNLAK 390 (498)
T ss_dssp CCSSSCCEEEEEESCCH------HHHHHHHHHHHHS-C-CCCHHHHHHHHHHTCCCCTTSTTHHHHH-HHHHHHHHHHHH
T ss_pred cCcccceEEEEEecCCH------HHHHHHHHHHhcc-C-CCCHHHHHHHHHHhcCCccCcccHHHHH-HHHHHHHHHHHH
Confidence 5899999984 44 6666654432211 1 2233333344433320 00 112455677888
Q ss_pred HHHHHHHHHHhc-CcEEecCCCCCceEEEccCC----------CCCcHHH--HHHhHhcCCeEEcCCCCCCCCCCCCCCe
Q 009673 382 NCRALASRLVEL-GYKLVSGGSDNHLVLVDLRP----------MGIDGAR--VEKILDMASITLNKNSVPGDKSALVPGG 448 (529)
Q Consensus 382 ~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~----------~~i~~~~--~~~~L~~~GI~v~~~~~Pg~~~~~~~~~ 448 (529)
+++.+.+.|++. |+.+..+. .+.+.|+++.. .+++.+. +.++|+++||.+..+..++. +..+++
T Consensus 391 ~~~~l~~~L~~~~g~~~~~p~-gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~--~~~~~~ 467 (498)
T 3ihj_A 391 KAKLTEDLFNQVPGIHCNPLQ-GAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQ--REGTYH 467 (498)
T ss_dssp HHHHHHHHHHTSTTEECCCCC-BSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCC--CTTCCB
T ss_pred HHHHHHHHHhcCCCcEecCCC-eEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCC--CCCCCE
Confidence 999999999885 88876542 34455555431 1444444 57788899999865433321 123568
Q ss_pred EEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 449 IRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 449 iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
+|+++. .++++++++++.|.++++..
T Consensus 468 ~Ris~~------~~~e~l~~~i~~L~~~~~~~ 493 (498)
T 3ihj_A 468 FRMTIL------PPVEKLKTVLQKVKDFHINF 493 (498)
T ss_dssp EEEECC------SCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeC------CCHHHHHHHHHHHHHHHHHH
Confidence 999972 45899999999999887654
No 135
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.90 E-value=8.8e-23 Score=214.20 Aligned_cols=357 Identities=13% Similarity=0.061 Sum_probs=220.8
Q ss_pred cccCChHHHHHHHHHHHHhhcceeEecCCCC-----CcHHHHHHHh--hhhhccC-CCCCCCCCCCCCchhHHHHHHHHH
Q 009673 83 LGEADPEVCEIITKEKERQFKSLELIASENF-----TSRAVMEAVG--SCLTNKY-SEGLPGKRYYGGNEYIDELETLCQ 154 (529)
Q Consensus 83 l~~~d~~~~~~~~~e~~~~~~~i~L~asen~-----~~~~V~eal~--~~l~~~y-~~G~p~~r~~~g~~~~d~lE~~a~ 154 (529)
+....+.+++.+.+-. .....|+|..+... +++.+++++. ..+.+.. ..+|| +......+++
T Consensus 7 ~~~~~~~~~~~~~~~~-~~~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp-----~~~~g~~~lr---- 76 (423)
T 3ez1_A 7 SRPALDLARQAYEAFK-ARGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYP-----GGVAGLPSAR---- 76 (423)
T ss_dssp CHHHHHHHHHHHHHHH-HHTCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSC-----SCTTCCHHHH----
T ss_pred HHHHHHHHHHHHHHhh-cCCceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCC-----CCCCChHHHH----
Confidence 4445555555543322 23366888776643 4567888875 4333111 12331 2112223444
Q ss_pred HHHHHHcCCCCCCCceeeecCChH-HHHH--HHHHhhcC--C---------CCEEEEcCCCCCccccccccccccccccc
Q 009673 155 KRALAAFNLDENKWGVNVQPLSGS-PANF--EVYTAILK--P---------HDRIMGLDLPHGGHLSHGFMTPKRRVSGT 220 (529)
Q Consensus 155 ~~la~~~g~~~~~~~~~V~~~sGs-~A~~--~~l~all~--p---------GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~ 220 (529)
+.++++++++++ +|.+++|+ +++. .++.++++ | ||+|++.+|.|.++.. .+...
T Consensus 77 ~~ia~~~~~~~~----~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~ 144 (423)
T 3ez1_A 77 ALFAGYLDVKAE----NVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFL--------LLQTL 144 (423)
T ss_dssp HHHHHHTTSCGG----GEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHH--------HHHHH
T ss_pred HHHHHHhCCChh----hEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHH--------HHHHc
Confidence 677888898875 45557776 7887 78888888 8 5999999988754421 23344
Q ss_pred cceEEEEEcccCCCCCCCCHHHHHHHhh-hcCCcEEEEc-CCCCCC--CCCHH---HHHHHH-HHhCCEEEEeccccccc
Q 009673 221 SIYFESMPYRLDESTGLVDYDMLEKTAI-LFRPKLIIAG-ASAYPR--DFDYP---RMRQIA-DAVGALLMMDMAHISGL 292 (529)
Q Consensus 221 g~~~~~v~~~v~~~~~~iD~d~le~~i~-~~~pklIi~~-~s~~p~--~~d~~---~i~~ia-~~~g~~livD~ah~~Gl 292 (529)
|. ++++++++.+ .+|+|+|+++++ ..++++|++. .++||+ ..+.+ +|.++| ++||+++|+|++|....
T Consensus 145 g~--~~~~v~~~~~--g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~ 220 (423)
T 3ez1_A 145 GF--ELLTVDMQSD--GPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHH 220 (423)
T ss_dssp TC--EEEEEEEETT--EECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCB
T ss_pred CC--EEEeccCCCC--CCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhh
Confidence 54 6667777643 499999999995 2378888765 678886 55555 888888 89999999999965322
Q ss_pred ccc-cccC--CC--------CCcccEEEeccccc-ccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHH
Q 009673 293 VAA-SVVA--DP--------FKYCDVVTTTTHKS-LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL 360 (529)
Q Consensus 293 i~~-~~~~--~~--------~~~aDiv~~S~hK~-l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaal 360 (529)
... +..+ +. ....++++.|+||+ ++|+|.||+++++ ++.+.+.........+.+...+.+ +
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~a-~ 293 (423)
T 3ez1_A 221 LVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSE------DNIRWLSKYLGAQSIGPNKVEQAR-H 293 (423)
T ss_dssp CCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECH------HHHHHHHHHHHHSCSCCCHHHHHH-H
T ss_pred cCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCH------HHHHHHHHHHhhhccCCCHHHHHH-H
Confidence 222 1111 10 11345889999995 5788999999987 676666543222222333333333 3
Q ss_pred HHHHHHhc---CchHHHHHHHHHHHHHHHHHHHHh----cC--cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeE
Q 009673 361 AVCLKHAQ---SPEFKVYQNKVVSNCRALASRLVE----LG--YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASIT 431 (529)
Q Consensus 361 a~al~~~~---~~~~~~~~~~i~~~a~~l~~~L~~----~G--~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~ 431 (529)
..+++... ...+++..+.+.++++.+.+.|.+ .| +.+..+ ...+++++++... +.+.+.+.|.++||.
T Consensus 294 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p-~~g~~~~~~~~~~--~~~~~~~~l~~~gv~ 370 (423)
T 3ez1_A 294 VKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLP-KGGYFISLDTAEP--VADRVVKLAEAAGVS 370 (423)
T ss_dssp HHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCC-SBSSCEEEEESSS--CHHHHHHHHHHTTEE
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCC-CccEEEEEECCCC--cHHHHHHHHHHCCcE
Confidence 33454311 112344555566666666666654 44 555543 2345677777532 567888999999999
Q ss_pred EcC-CCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 432 LNK-NSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 432 v~~-~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
+.. +...+......+++|||++... +++++++.++.|.++++..
T Consensus 371 v~~~g~~~~~~~~~~~~~iRis~~~~-----~~~~i~~~~~~l~~~l~~~ 415 (423)
T 3ez1_A 371 LTPAGATYPAGQDPHNRNLRLAPTRP-----PVEEVRTAMQVVAACIRLA 415 (423)
T ss_dssp CCCTTTTSSTTCCSSSCEEEECCSSS-----CHHHHHHHHHHHHHHHHHH
T ss_pred EecCcccccCCCCCCCCeEEEEcCCC-----CHHHHHHHHHHHHHHHHHH
Confidence 954 2111111112467899997532 4899999999999988754
No 136
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.90 E-value=7.6e-23 Score=211.89 Aligned_cols=332 Identities=16% Similarity=0.093 Sum_probs=202.4
Q ss_pred HHHHHHHHHHHh-h-cceeEecCC--CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC
Q 009673 90 VCEIITKEKERQ-F-KSLELIASE--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE 165 (529)
Q Consensus 90 ~~~~~~~e~~~~-~-~~i~L~ase--n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~ 165 (529)
.+..+....+.. . +.+++...+ .+++++|++++. .| ++. ..+++..++.+++++|++.
T Consensus 14 ~~~~~~~~i~~~g~~~v~~~~~~~~~~~~~~~v~~a~~-----~~----------~~~---~~~~~~~~~~~a~~~g~~~ 75 (374)
T 2aeu_A 14 ARKIILEILNEKGRDALYDLSGLSGGFLIDEKDKALLN-----TY----------IGS---SYFAEKVNEYGLKHLGGDE 75 (374)
T ss_dssp HHHHHHHHHHHTCGGGCEECSSCCCCCCCCHHHHHHHT-----ST----------THH---HHHHHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHhccCccceeeecccCCCCCCCHHHHHHHH-----Hh----------cCc---hHHHHHHHHHHHHHhCCCC
Confidence 344444443322 2 456666543 468999999996 12 111 2334455577788999842
Q ss_pred CCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHH
Q 009673 166 NKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEK 245 (529)
Q Consensus 166 ~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~ 245 (529)
.+ ..+.+++|++|+..++.++ |||+|++++|.|++|++... .+...|. +++.+ .|++++++
T Consensus 76 ~~--~~~~~~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~-----~~~~~g~--~~~~v--------~d~~~l~~ 136 (374)
T 2aeu_A 76 ND--KCVGFNRTSSAILATILAL--KPKKVIHYLPELPGHPSIER-----SCKIVNA--KYFES--------DKVGEILN 136 (374)
T ss_dssp TE--EEEEESSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHH-----HHHHTTC--EEEEE--------SCHHHHHT
T ss_pred cc--eEEEEcChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHH-----HHHHcCc--EEEEe--------CCHHHHHh
Confidence 11 1255577789999999988 99999999998877653110 1233454 55443 37899988
Q ss_pred HhhhcCCcE-EEEcCCCCCC---CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccccCCC
Q 009673 246 TAILFRPKL-IIAGASAYPR---DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR 320 (529)
Q Consensus 246 ~i~~~~pkl-Ii~~~s~~p~---~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~Gpr 320 (529)
. ++ ++++ |++++++||+ ..++++|.++|++||+++|+|++|..+........+++. +.|++++|+||+++|||
T Consensus 137 ~-~~-~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~~ 214 (374)
T 2aeu_A 137 K-ID-KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPR 214 (374)
T ss_dssp T-CC-TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCS
T ss_pred c-CC-CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCcc
Confidence 8 54 8999 8888888875 468999999999999999999987655310010111222 57999999999999999
Q ss_pred CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH----HHHHHh----
Q 009673 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL----ASRLVE---- 392 (529)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l----~~~L~~---- 392 (529)
+|++++++ ++.+++....... .++++....+++..+++... .+..++..++++.+ .+.|.+
T Consensus 215 ~G~~~~~~------~~~~~l~~~~~~~-~~~~~~~~~~a~~~al~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 283 (374)
T 2aeu_A 215 GGLLAGKK------ELVDKIYIEGTKF-GLEAQPPLLAGIYRALKNFN----LERIRKAFERAKNFDLSKIEKLNKELKA 283 (374)
T ss_dssp CEEEEEEH------HHHHHHHHHHHTT-TCBCCHHHHHHHHHHHHHCC----HHHHHHHHHHHHHCCCHHHHHHHHHHTT
T ss_pred eEEEEECH------HHHHHHHHhhccc-cCCCCHHHHHHHHHHHHHHh----HHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999988 6777665433221 12334444445555676531 12334444555444 444443
Q ss_pred ----cCcEEecCCCCCceEEE-ccCCCCCc---HH-HHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCH
Q 009673 393 ----LGYKLVSGGSDNHLVLV-DLRPMGID---GA-RVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE 463 (529)
Q Consensus 393 ----~G~~v~~~gt~~~~~~v-~~~~~~i~---~~-~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~ 463 (529)
.|+.+..... +.++++ +... ..+ .. .+.++|+++||.+.+ |...+...+++||++.... ..+
T Consensus 284 ~~~~~g~~~~~~~~-g~~~~~~~~~~-~~~~~~~~~~~~~ll~~~gV~v~~----g~~~~~~~~~lRi~~~~~~---~~~ 354 (374)
T 2aeu_A 284 IDDNINIVYERTPT-GFVIKRVYKDD-TINIKKLIEIGFNLLKNYGIITIT----VAGMPGASKSLRIDLTSRD---AER 354 (374)
T ss_dssp TCTTEEEEEEECSS-EEEEEEEESSH-HHHHHHHHHHHHHHHHHHCEECST----TSSSCSSCCSEEEETTSGG---GGG
T ss_pred hhhccCcceeeCCc-eEEEEeecccc-cccccchHHHHHHHHHhCCEEEec----CCCCCCCCCeEEEEcCCch---HHH
Confidence 2455433222 233333 3321 001 01 334677889999954 3322223568999974322 234
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009673 464 KEFVAIADFIHEGVEIT 480 (529)
Q Consensus 464 ~d~~~la~~i~~~~~~~ 480 (529)
.+++++++.|+++++..
T Consensus 355 ~~l~~l~~~l~~~l~~~ 371 (374)
T 2aeu_A 355 IDDNYIIKAIVESIKMA 371 (374)
T ss_dssp SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45888888888877643
No 137
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.90 E-value=1e-22 Score=218.06 Aligned_cols=332 Identities=12% Similarity=0.002 Sum_probs=215.2
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCC-------ceeeecCChHHHHHHHHH
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKW-------GVNVQPLSGSPANFEVYT 186 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~-------~~~V~~~sGs~A~~~~l~ 186 (529)
++..+.+.+.+.+... .. .|...+...++|+.+.+|+++++|.+.+.+ +.-|.+++||+||+.++.
T Consensus 91 ~~~~~~~~~~~~~n~~-~~------~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~ 163 (481)
T 4e1o_A 91 WPSLLGDMLADAINCL-GF------TWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALL 163 (481)
T ss_dssp HHHHHHHHHHHHHCCC-CS------STTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcc-cC------CcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHH
Confidence 3445555665555321 11 133345678999999999999999986421 123556778899998887
Q ss_pred hhcC-------------------CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHh
Q 009673 187 AILK-------------------PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTA 247 (529)
Q Consensus 187 all~-------------------pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i 247 (529)
+..+ |+++|++.+..|.+.. +.+...|. +++.++++ +++.+|+++|++++
T Consensus 164 ~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~Le~~i 232 (481)
T 4e1o_A 164 AARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVE--------KAGLISLV--KMKFLPVD-DNFSLRGEALQKAI 232 (481)
T ss_dssp HHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHH--------HHHHHHTC--EEEEECCC-TTSCCCHHHHHHHH
T ss_pred HHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHH--------HHHHhCCC--ceEEEEcC-CCCcCCHHHHHHHH
Confidence 6532 6789998887764432 23334454 66677776 57899999999999
Q ss_pred hhcC-----CcEEEEcCCCC--CCCCCHHHHHHHHHHhCCEEEEecccccccccccccCC---CCCcccEEEeccccccc
Q 009673 248 ILFR-----PKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD---PFKYCDVVTTTTHKSLR 317 (529)
Q Consensus 248 ~~~~-----pklIi~~~s~~--p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~---~~~~aDiv~~S~hK~l~ 317 (529)
++.+ |.+|+++.+++ +...|+++|+++|++||+|+++|+||..+....+.... .++.+|++++++|||+.
T Consensus 233 ~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~ 312 (481)
T 4e1o_A 233 EEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMM 312 (481)
T ss_dssp HHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSS
T ss_pred HHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcC
Confidence 7632 66676664443 34789999999999999999999998766543322211 12357999999999999
Q ss_pred CCCC-eEEEeeCCCcchhHHHh-hhcc---cccC------------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHH
Q 009673 318 GPRG-GMIFFKKDPVLGVELES-AINN---AVFP------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV 380 (529)
Q Consensus 318 Gprg-G~i~~~~~~~~~~~l~~-~i~~---~~~p------------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~ 380 (529)
+|.+ |+++++++ ++.. .+.. .... ..+++... ...++..+++.+...++.++.++..
T Consensus 313 ~p~g~g~l~~~~~-----~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~-~~l~~~~al~~~g~~g~~~~~~~~~ 386 (481)
T 4e1o_A 313 VHFDCTGFWVKDK-----YKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRF-RSVKLWFVIRSFGVKNLQAHVRHGT 386 (481)
T ss_dssp CCSSCEEEEESBH-----HHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCC-THHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEeCH-----HHHHHHhcCCchhccCcccCCCCCcccccccCCCCc-cHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 9988 88888774 3322 1110 0000 11122111 2334445555554567788999999
Q ss_pred HHHHHHHHHHHhc-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCe-EEcCCCCCCCCCCCCCCeEEEccCCCcc
Q 009673 381 SNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASI-TLNKNSVPGDKSALVPGGIRIGSPAMTT 458 (529)
Q Consensus 381 ~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI-~v~~~~~Pg~~~~~~~~~iRig~~~~tt 458 (529)
++++++.+.|++. |++++.+. ..+++++.+...+....++.+.|.+.|+ .+.. +. ..+...+|+++....
T Consensus 387 ~~a~~l~~~L~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~----~~--~~g~~~lR~~~~~~~- 458 (481)
T 4e1o_A 387 EMAKYFESLVRNDPSFEIPAKR-HLGLVVFRLKGPNSLTENVLKEIAKAGRLFLIP----AT--IQDKLIIRFTVTSQF- 458 (481)
T ss_dssp HHHHHHHHHHHTCTTEECCSCC-CSSEEEEEESSCHHHHHHHHHHHHHHCSSBCEE----EE--ETTEEEEEEECCCTT-
T ss_pred HHHHHHHHHHhcCCCeEEecCC-ceeEEEEEeCCchHHHHHHHHHHHhCCeEEEEe----eE--ECCEEEEEEEeCCCC-
Confidence 9999999999984 99987542 3455666664322223556677766674 3321 11 112457999864322
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 009673 459 RGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 459 ~g~~~~d~~~la~~i~~~~~~ 479 (529)
.+++|++++.+.|+++...
T Consensus 459 --tt~~di~~~~~~i~~~~~~ 477 (481)
T 4e1o_A 459 --TTRDDILRDWNLIRDAATL 477 (481)
T ss_dssp --CCHHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHHHH
Confidence 3589999999999987753
No 138
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.90 E-value=7.4e-23 Score=215.12 Aligned_cols=359 Identities=14% Similarity=0.043 Sum_probs=216.1
Q ss_pred hhhcccCChHHHHHHHHHHHHhhcceeEecCCCC-----CcHHHHHHHhhhhh--cc-CCCCCCCCCCCCCchhHHHHHH
Q 009673 80 DYSLGEADPEVCEIITKEKERQFKSLELIASENF-----TSRAVMEAVGSCLT--NK-YSEGLPGKRYYGGNEYIDELET 151 (529)
Q Consensus 80 ~~~l~~~d~~~~~~~~~e~~~~~~~i~L~asen~-----~~~~V~eal~~~l~--~~-y~~G~p~~r~~~g~~~~d~lE~ 151 (529)
.+.+......++....+... +...|+|..+++. +++.+++++...+. .. ...+|+. .....+++
T Consensus 11 ~~~l~~~~~~~~~~~~~l~~-~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~------~~G~~~lr- 82 (422)
T 3d6k_A 11 AARLAQVREEVTAKYAELKA-KNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGG------LLGIADIR- 82 (422)
T ss_dssp -------CHHHHHHHHHHHH-TTCCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCC------SSCCHHHH-
T ss_pred HHHHHhhHHHHHHHHHHHhc-cCCeEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCC------CCCCHHHH-
Confidence 34455566666665443322 3346888888873 34567777654421 11 1123332 11123444
Q ss_pred HHHHHHHHHcCCCCCCCceeeecCChH-HHH--HHHHHhhcCC------------CCEEEEcCCCCCccccccccccccc
Q 009673 152 LCQKRALAAFNLDENKWGVNVQPLSGS-PAN--FEVYTAILKP------------HDRIMGLDLPHGGHLSHGFMTPKRR 216 (529)
Q Consensus 152 ~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~--~~~l~all~p------------GD~Vl~~~~~~~g~~s~g~~~~~~~ 216 (529)
+.++++++++++ +|.+++|+ +++ ..++.++.++ ||+|++.+|.|.++.. .
T Consensus 83 ---~~ia~~~~~~~~----~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~--------~ 147 (422)
T 3d6k_A 83 ---ELWAEALGLPAD----LVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFT--------I 147 (422)
T ss_dssp ---HHHHHHHTCCGG----GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHH--------H
T ss_pred ---HHHHHHhCCChh----HEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHH--------H
Confidence 566777888875 45567777 676 4556677666 3589999998755421 2
Q ss_pred cccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE-EcCCCCCC--CCCHH---HHHHHHH-HhCCEEEEecccc
Q 009673 217 VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII-AGASAYPR--DFDYP---RMRQIAD-AVGALLMMDMAHI 289 (529)
Q Consensus 217 i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi-~~~s~~p~--~~d~~---~i~~ia~-~~g~~livD~ah~ 289 (529)
+...|. +++.+++++ ++ +|+++|++.+++.++++|+ +++++||+ ..+.+ +|.++|+ ++|++||+|++|.
T Consensus 148 ~~~~g~--~~~~v~~~~-~g-~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~ 223 (422)
T 3d6k_A 148 TEHFGF--EMINVPMTD-EG-PDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYA 223 (422)
T ss_dssp HHHHTC--EEEEEEEET-TE-ECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTT
T ss_pred HHHcCC--EEEecCCCC-CC-CCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCcc
Confidence 334454 666777764 33 9999999999755789888 56788886 56655 7777777 8999999999976
Q ss_pred c-ccccccccCCCC---------CcccEEEeccccc-ccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHH
Q 009673 290 S-GLVAASVVADPF---------KYCDVVTTTTHKS-LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIG 358 (529)
Q Consensus 290 ~-Gli~~~~~~~~~---------~~aDiv~~S~hK~-l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~ia 358 (529)
. ++...+....++ ...+++++|+||+ ++|+|.||+++++ ++.+.+.........+.+.. ..+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~------~l~~~l~~~~~~~~~~~~~~-~q~ 296 (422)
T 3d6k_A 224 LHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSK------ENIEWYASHANVRGIGPNKL-NQL 296 (422)
T ss_dssp TCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCH------HHHHHHHHHHHHHCSCCCHH-HHH
T ss_pred ccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCH------HHHHHHHHHHHhhcCCCCHH-HHH
Confidence 3 333222111111 1346889999996 4788999999987 67666654322222233333 333
Q ss_pred HHHHHHHHhc--CchHHHHHHHHHHHHHHHHHHHHh----cC-cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeE
Q 009673 359 GLAVCLKHAQ--SPEFKVYQNKVVSNCRALASRLVE----LG-YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASIT 431 (529)
Q Consensus 359 ala~al~~~~--~~~~~~~~~~i~~~a~~l~~~L~~----~G-~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~ 431 (529)
++..+++... ....++..+.+.++++.+.+.|.+ .| +.+..+ ...+++|+++... +.+++.+.|.++||.
T Consensus 297 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p-~~g~~~~~~~~~~--~~~~~~~~l~~~gV~ 373 (422)
T 3d6k_A 297 AHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSP-TGGYFISVDVVPG--TASRVVELAKEAGIA 373 (422)
T ss_dssp HHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCC-SBSSCEEEEESTT--CHHHHHHHHHHTTEE
T ss_pred HHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCC-CcceEEEEECCCC--CHHHHHHHHHHCCeE
Confidence 3333443200 012344556666778888888765 23 565443 2356678887532 567788889999999
Q ss_pred EcCC-CCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 432 LNKN-SVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 432 v~~~-~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
+..+ ...+......+++|||++.. .++++++++++.|++++...
T Consensus 374 v~~~g~~f~~~~~~~~~~iRis~~~-----~~~e~i~~~~~~l~~~l~~~ 418 (422)
T 3d6k_A 374 LTGAGSSFPLHNDPNNENIRLAPSL-----PPVAELEVAMDGFATCVLMA 418 (422)
T ss_dssp CCCTTTTSGGGCCTTSCEEEECCSS-----SCHHHHHHHHHHHHHHHHHH
T ss_pred EEcCccccCCCCCCCCCeEEEecCC-----CCHHHHHHHHHHHHHHHHHH
Confidence 9542 11100000135789999754 34899999999999887643
No 139
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.90 E-value=5.9e-23 Score=214.69 Aligned_cols=346 Identities=10% Similarity=-0.001 Sum_probs=210.8
Q ss_pred hcceeEecCCCCCc----HHHHHHHhhhhhccC----CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeee
Q 009673 102 FKSLELIASENFTS----RAVMEAVGSCLTNKY----SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ 173 (529)
Q Consensus 102 ~~~i~L~asen~~~----~~V~eal~~~l~~~y----~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~ 173 (529)
.+.|+|..+.+... +.+.+++...+.+.. ..+|+. .....++++...+++.+.+|...+. .+|.
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~------~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~ 102 (417)
T 3g7q_A 31 PGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDG------PQGKTALLNALAVLLRETLGWDIEP--QNIA 102 (417)
T ss_dssp -CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTC------TTSHHHHHHHHHHHHHHHHCCCCCG--GGEE
T ss_pred CCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCC------CCCcHHHHHHHHHHHHHHhCCCCCc--ccEE
Confidence 36688887765543 455666665543321 012322 2234567766667777777765321 2455
Q ss_pred cCChH-HHHHHHHHhhcCCCC-----EEEEc-CCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHH
Q 009673 174 PLSGS-PANFEVYTAILKPHD-----RIMGL-DLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKT 246 (529)
Q Consensus 174 ~~sGs-~A~~~~l~all~pGD-----~Vl~~-~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~ 246 (529)
+++|+ +|+..++.++++||| +|+++ +|.|.++...... .-...+....+..++.+..++.+|+++|+
T Consensus 103 ~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~~~l~-- 176 (417)
T 3g7q_A 103 LTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLE----DDLFVSARPNIELLPEGQFKYHVDFEHLH-- 176 (417)
T ss_dssp EESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC---------CCEEECCCEEEEEGGGEEEEECCGGGCC--
T ss_pred EeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccc----hhhhccccCcccccCCcccccccCHHHhc--
Confidence 56665 999999999999988 89987 8877554321100 00111222244444432123568999887
Q ss_pred hhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccc---cccccCCCCCcccEEEecccccc-c
Q 009673 247 AILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLV---AASVVADPFKYCDVVTTTTHKSL-R 317 (529)
Q Consensus 247 i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli---~~~~~~~~~~~aDiv~~S~hK~l-~ 317 (529)
+++ ++++|++++++||+ ..+ +++|.++|++||+++|+|++|..... ..+..+ .....+++++|+||++ +
T Consensus 177 ~~~-~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~ 254 (417)
T 3g7q_A 177 IGE-ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARP-LWNPNIILCMSLSKLGLP 254 (417)
T ss_dssp CCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCC-CCCTTEEEEEESGGGTCT
T ss_pred ccc-CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccccccccccc-CCCCCEEEEEechhccCC
Confidence 555 78999999888887 556 88999999999999999999753211 111111 1124578899999964 6
Q ss_pred CCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHH----H-HHHHHHHHHHHHHHHHHh
Q 009673 318 GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK----V-YQNKVVSNCRALASRLVE 392 (529)
Q Consensus 318 GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~----~-~~~~i~~~a~~l~~~L~~ 392 (529)
|.|.||+++++ ++.+.+.........+++...+. ++...++. .++. + ..+++.++++.+.+.|.+
T Consensus 255 G~r~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 324 (417)
T 3g7q_A 255 GSRCGIIIAND------KTITAIANMNGIISLAPGGMGPA-MMCEMIKR---NDLLRLSETVIKPFYYQRVQQTIAIIRR 324 (417)
T ss_dssp TSCCEEEECCH------HHHHHHHHHHHHHCCCCCSHHHH-HHHHHHHT---TCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEeCH------HHHHHHHHhhcceeeCCCcHHHH-HHHHHHcC---cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77889999987 67666654322111222223222 22333432 2221 2 455667778888888876
Q ss_pred c----CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCC--C--CCCeEEEccCCCccCCCCHH
Q 009673 393 L----GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSA--L--VPGGIRIGSPAMTTRGFSEK 464 (529)
Q Consensus 393 ~----G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~--~--~~~~iRig~~~~tt~g~~~~ 464 (529)
. |+.+..+ ..+.++|+++...+++..++.+.|.++||.+..+...+.... . .+++|||++.. +++
T Consensus 325 ~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~------~~~ 397 (417)
T 3g7q_A 325 YLSEERCLIHKP-EGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP------EPD 397 (417)
T ss_dssp HCCTTTCEEECC-CBSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS------CHH
T ss_pred hcccCCceeeCC-CcceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC------CHH
Confidence 2 5776644 235667788865466788888889999999865432111100 0 14689999752 589
Q ss_pred HHHHHHHHHHHHHHHH
Q 009673 465 EFVAIADFIHEGVEIT 480 (529)
Q Consensus 465 d~~~la~~i~~~~~~~ 480 (529)
++++.++.|.+++...
T Consensus 398 ~i~~~~~~l~~~l~~~ 413 (417)
T 3g7q_A 398 KIEAGVKILAEEIERA 413 (417)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988643
No 140
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.90 E-value=1.7e-22 Score=206.20 Aligned_cols=322 Identities=12% Similarity=0.091 Sum_probs=208.0
Q ss_pred ceeEecCCC-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 009673 104 SLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (529)
Q Consensus 104 ~i~L~asen-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~ 182 (529)
.+.|..+.+ .+++.|++++...+. .|..+ ++.. ++.+.+++++++++|.++++ .+...+|++|+.
T Consensus 15 ~i~l~~~~~~~~~~~v~~a~~~~~~-~~~~~------~g~~----~~~~~~~~~l~~~~g~~~~~---v~~~~g~t~a~~ 80 (359)
T 1svv_A 15 PYSFVNDYSVGMHPKILDLMARDNM-TQHAG------YGQD----SHCAKAARLIGELLERPDAD---VHFISGGTQTNL 80 (359)
T ss_dssp CEECSCSCSSCCCHHHHHHHHHHTT-CCCCS------TTCS----HHHHHHHHHHHHHHTCTTSE---EEEESCHHHHHH
T ss_pred eEEecCCCcCCCCHHHHHHHHHHHh-hcccc------cccc----HHHHHHHHHHHHHhCCCCcc---EEEeCCchHHHH
Confidence 466655443 578999999988774 33221 1112 33445558899999987642 233456669999
Q ss_pred HHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc------CCcEEE
Q 009673 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF------RPKLII 256 (529)
Q Consensus 183 ~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~------~pklIi 256 (529)
.++.++++|||+|+++++.|.++.... .+...|. +++.++.+ ++.+|+++|++.+++. ++++|+
T Consensus 81 ~~~~~~~~~gd~vl~~~~~~~~~~~~~------~~~~~g~--~~~~v~~~--~~~~d~~~l~~~l~~~~~~~~~~~~~v~ 150 (359)
T 1svv_A 81 IACSLALRPWEAVIATQLGHISTHETG------AIEATGH--KVVTAPCP--DGKLRVADIESALHENRSEHMVIPKLVY 150 (359)
T ss_dssp HHHHHHCCTTEEEEEETTSHHHHSSTT------HHHHTTC--CEEEECCT--TSCCCHHHHHHHHHHSCSTTSCEEEEEE
T ss_pred HHHHHHhCCCCEEEEcccchHHHHHHH------HHhcCCC--eeEEEeCC--CCeecHHHHHHHHHHHHhccCCCceEEE
Confidence 999999999999999999876553210 1233454 56666654 5789999999999873 288998
Q ss_pred EcCCCCCC-CCC---HHHHHHHHHHhCCEEEEeccc---ccccccccccCCCC---CcccEEEecccccccCCCC-eEEE
Q 009673 257 AGASAYPR-DFD---YPRMRQIADAVGALLMMDMAH---ISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIF 325 (529)
Q Consensus 257 ~~~s~~p~-~~d---~~~i~~ia~~~g~~livD~ah---~~Gli~~~~~~~~~---~~aDiv~~S~hK~l~Gprg-G~i~ 325 (529)
++++++.+ ..+ +++|.++|++||+++|+|++| ..|.... ....+ ..+|+++.|+||+ .+|.+ |+++
T Consensus 151 ~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l~ 227 (359)
T 1svv_A 151 ISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN--DLTLADIARLTDMFYIGATKA-GGMFGEALII 227 (359)
T ss_dssp EESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC--CCCHHHHHHHCSEEEEECTTT-TCSSCEEEEE
T ss_pred EEcCCCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc--chhhhhhhhcCCEEEEecccC-CCCCceEEEE
Confidence 88774222 566 889999999999999999997 3332211 11111 1478999999997 56777 9999
Q ss_pred eeCCCcchhHHHhhhcccc-cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCC
Q 009673 326 FKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 404 (529)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~ 404 (529)
+++ ++.+.+.... ..+...+......++++.+ +...++++..+++.++++++.+.|+..|+++..+. ..
T Consensus 228 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~ 297 (359)
T 1svv_A 228 LND------ALKPNARHLIKQRGALMAKGWLLGIQFEVL---MKDNLFFELGAHSNKMAAILKAGLEACGIRLAWPS-AS 297 (359)
T ss_dssp CSG------GGCTTHHHHHHHTTCCCTTTHHHHHHHHHH---TSTTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCC-SS
T ss_pred Ecc------cHHHHHHHHHhcCCcccccchhhHHHHHHH---HhhhhHHHHHHHHHHHHHHHHHHhccCCeEEccCC-cc
Confidence 877 4544443221 0111101122222333222 22345677888999999999999955788876442 34
Q ss_pred ceEEEccCCCCCcHHHHHHhHhcC-CeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 405 HLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 405 ~~~~v~~~~~~i~~~~~~~~L~~~-GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+++++++. .++.+.|.+. ||.+-.. . +..+++|||+.+.. .+++|++++++.|+++++
T Consensus 298 ~~~~~~~~------~~~~~~l~~~~gi~v~~~-~-----~~~~~~iRi~~~~~----~~~~~i~~~~~~l~~~~~ 356 (359)
T 1svv_A 298 NQLFPILE------NTMIAELNNDFDMYTVEP-L-----KDGTCIMRLCTSWA----TEEKECHRFVEVLKRLVA 356 (359)
T ss_dssp SEECBEEE------HHHHHHHTTTEECEEEEE-E-----TTTEEEEEEECCTT----CCHHHHHHHHHHHHHC--
T ss_pred ceEEEEcC------HHHHHHHHHhcCEEEEec-c-----cCCCceEEEEccCc----CCHHHHHHHHHHHHHHHh
Confidence 55555442 3566666665 9998210 0 11356899986543 458999999999988764
No 141
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.90 E-value=1.5e-22 Score=227.02 Aligned_cols=298 Identities=14% Similarity=0.080 Sum_probs=207.9
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (529)
Q Consensus 153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v 231 (529)
+++.+++++|.+. .+.+++|+ +||.+++.++++|||+|+++.+.|.+.+. .+...|. +++.++.
T Consensus 210 ~ee~la~l~G~d~-----~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~--------~~~~~G~--~~v~v~~ 274 (755)
T 2vyc_A 210 SEKYAARVFGADR-----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQ--------GLMLTGA--KPVYMVP 274 (755)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHHCC--EEEEECC
T ss_pred HHHHHHHHhCCCc-----eEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHH--------HHHHcCC--EEEEEeC
Confidence 4578899999874 24457887 89999999999999999999988765431 2334555 5666555
Q ss_pred CCCC----CCC-----CHHHHHHHhhhc-CC--------cEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEeccccccc
Q 009673 232 DEST----GLV-----DYDMLEKTAILF-RP--------KLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGL 292 (529)
Q Consensus 232 ~~~~----~~i-----D~d~le~~i~~~-~p--------klIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gl 292 (529)
+.++ +.+ |+++|++++++. ++ ++++++++++.+ ..|+++|+++|++||++|++|+||+.++
T Consensus 275 ~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~ 354 (755)
T 2vyc_A 275 SRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_dssp CBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEECTTCTTG
T ss_pred CCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECCCCCceecCHHHHHHHHHHcCCEEEEECcCchhc
Confidence 4322 235 999999999752 23 488887776544 7899999999999999999999997654
Q ss_pred cccccc--CCCCCc--ccE------EEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHH
Q 009673 293 VAASVV--ADPFKY--CDV------VTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLA 361 (529)
Q Consensus 293 i~~~~~--~~~~~~--aDi------v~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala 361 (529)
...+.. ..++.+ +|+ +++|+||+++|+++ |+++++++.... + ...++........++|++..++++.
T Consensus 355 ~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i-~-~~~~~~~~~~~~s~sp~~~~iaal~ 432 (755)
T 2vyc_A 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAI-N-FSRFNQAYMMHATTSPLYAICASND 432 (755)
T ss_dssp GGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCC-C-HHHHHHHHHHTSCSSCCHHHHHHHH
T ss_pred ccCcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCccccc-C-HHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 333211 122233 565 99999999999985 888887631000 0 1122222112235788999999999
Q ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cC---------cEEecCC------------------------------
Q 009673 362 VCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LG---------YKLVSGG------------------------------ 401 (529)
Q Consensus 362 ~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G---------~~v~~~g------------------------------ 401 (529)
+|++.+...+..++.++..++++.+++.|++ .| ++++.+.
T Consensus 433 aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (755)
T 2vyc_A 433 VAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVM 512 (755)
T ss_dssp HHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBC
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhcc
Confidence 9998876554678889999999999999987 35 6554321
Q ss_pred -------------C-----CCceEEEccCCC---------CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccC
Q 009673 402 -------------S-----DNHLVLVDLRPM---------GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSP 454 (529)
Q Consensus 402 -------------t-----~~~~~~v~~~~~---------~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~ 454 (529)
. |...+.++++.. |+++..+.+.|+++||.+.+. ..+.+|+.++
T Consensus 513 ~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~---------~~~~v~~~~~ 583 (755)
T 2vyc_A 513 HPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRT---------TDFQIMFLFS 583 (755)
T ss_dssp CTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEE---------CSSEEEEECC
T ss_pred CcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeec---------CCCeEEEEEC
Confidence 0 223345555432 455588999999999988542 2567998765
Q ss_pred CCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 455 AMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 455 ~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
. |.++++++++++.|.++.+..
T Consensus 584 ~----g~t~~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 584 M----GVTRGKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp T----TCCTTTTHHHHHHHHHHHHHH
T ss_pred C----CCCHHHHHHHHHHHHHHHHhh
Confidence 4 456899999999998886543
No 142
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.90 E-value=3.9e-22 Score=208.69 Aligned_cols=306 Identities=17% Similarity=0.147 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhc--cCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCC
Q 009673 89 EVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTN--KYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN 166 (529)
Q Consensus 89 ~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~--~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~ 166 (529)
++++.++++...+...++.++..|. .+|+++|...... .+.. ..+ |.-+....+++| +.+++++|.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~n~--~~vl~a~~~~~~~~~~~~~-~~~--~~y~~~~~~~Le----~~lA~l~g~e~- 76 (409)
T 3jzl_A 7 AIRKKVETQIDDLQNKTDEIAEFNQ--AKVLDAFQENKVSDFHFHP-STG--YGYDDEGRDTLE----RVYATVFKTEA- 76 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGGCC-CCT--TCTTCHHHHHHH----HHHHHHHTCSE-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHhhhhhhccCC-CcC--CCCChhHHHHHH----HHHHHHhCCCc-
Confidence 3455555555555566666766664 6788888765421 1211 111 111223355565 67899999986
Q ss_pred CCceeee--cCChHHHHHHHHHhhcCCCCEEEEcC-CCCCccccccc-cc-cccccccccceEEEEEcccCCCCCCCCHH
Q 009673 167 KWGVNVQ--PLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLSHGF-MT-PKRRVSGTSIYFESMPYRLDESTGLVDYD 241 (529)
Q Consensus 167 ~~~~~V~--~~sGs~A~~~~l~all~pGD~Vl~~~-~~~~g~~s~g~-~~-~~~~i~~~g~~~~~v~~~v~~~~~~iD~d 241 (529)
..|. ++||++|+..++.++++|||+|++.+ +.|++.....- .. ....+...|. +++.++++ +++.+|+|
T Consensus 77 ---alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~--~~~~v~~~-~~g~~d~e 150 (409)
T 3jzl_A 77 ---ALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHI--GYSSVPLL-ENGDVDFP 150 (409)
T ss_dssp ---EEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTC--EEEECCCC-TTSCCCHH
T ss_pred ---EEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCC--EEEEeCCC-CCCCcCHH
Confidence 3443 68999999999999999999999998 77665421000 00 0001223344 67777776 46889999
Q ss_pred HHHHHhhhcCCcEEEEcC----CCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCCC-cccEEEecc
Q 009673 242 MLEKTAILFRPKLIIAGA----SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTT 312 (529)
Q Consensus 242 ~le~~i~~~~pklIi~~~----s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~ 312 (529)
++++++++ ++|+|+++. ++|++ ..|+++|+++|++ +|+++++|++|..+... ..+.. ++|++++|+
T Consensus 151 ~l~~ai~~-~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~----~~p~~~g~Div~~S~ 225 (409)
T 3jzl_A 151 RIAKKMTP-KTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEY----QEPPEVGADIIAGSL 225 (409)
T ss_dssp HHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSS----CCSGGGTCSEEEEET
T ss_pred HHHHhccC-CCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccccccc----CCccccCCeEEEECc
Confidence 99999987 899999987 77776 5689999999999 99999999997655321 12333 689999999
Q ss_pred cccccC---CCCeEEEeeCCCcchhHHHhhhccc-ccCCC--CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673 313 HKSLRG---PRGGMIFFKKDPVLGVELESAINNA-VFPGL--QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 386 (529)
Q Consensus 313 hK~l~G---prgG~i~~~~~~~~~~~l~~~i~~~-~~p~~--~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l 386 (529)
||++.| +.||++++++ ++.+++... ..+++ ..++......++...++. ...++++..+|++++
T Consensus 226 sK~lgg~~~~~GG~v~~~~------~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~~-----~~~r~~~~~~~a~~l 294 (409)
T 3jzl_A 226 IKNPGGGLAKTGGYIAGKE------ALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFFL-----APHVTAQAIKGARFT 294 (409)
T ss_dssp TSGGGTTTCSSCEEEEECH------HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHH-----HHHHHHHHHHHHHHH
T ss_pred cccCCccCCceEEEEEeCH------HHHHHHHHHhccccccccccccHHHHHHHHHHHhh-----HHHHHHHHHHHHHHH
Confidence 999976 5689999987 777766542 12222 112222111222222322 356788899999999
Q ss_pred HHHHHhcCcEEecCCCCCc-----eEEEccCCCCCcHHHHHHhHhcCC
Q 009673 387 ASRLVELGYKLVSGGSDNH-----LVLVDLRPMGIDGARVEKILDMAS 429 (529)
Q Consensus 387 ~~~L~~~G~~v~~~gt~~~-----~~~v~~~~~~i~~~~~~~~L~~~G 429 (529)
++.|++.|+++.++ .++ +..+.+.. ......+.+.|++..
T Consensus 295 a~~L~~~g~~v~p~--~~~~~~~~i~~i~l~~-~~~~~~~~~~L~~~~ 339 (409)
T 3jzl_A 295 AAMLAEFGVEADPV--WDAPRTDLIQSVSFHN-KEKMVAFAQAIQAAS 339 (409)
T ss_dssp HHHHHHTTCEEESC--TTSCCSSSCCEEECSC-HHHHHHHHHHHHHTS
T ss_pred HHHHHhCCCcccCC--CCCCCccEEEEEEeCC-HHHHHHHHHHHHhcC
Confidence 99999999988543 223 44444531 112234556666654
No 143
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.90 E-value=8.6e-23 Score=209.13 Aligned_cols=330 Identities=12% Similarity=0.053 Sum_probs=206.2
Q ss_pred eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 009673 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (529)
Q Consensus 105 i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~ 184 (529)
-.|..+.++..+++++++...+ . +..+...|+..+...+++ +++++++|.+. .|.+++|++|+..+
T Consensus 13 ~~l~~~~~p~~~~~~~~~~~~~----~-~~~~~~~y~~~~~~~~l~----~~la~~~~~~~-----~i~~~~G~~a~~~a 78 (357)
T 3lws_A 13 TGQISGHGKRNVGVLKTAFAAV----A-DEMASDQYGTGAIIEPFE----QKFADVLGMDD-----AVFFPSGTMAQQVA 78 (357)
T ss_dssp SEESSBSSCCBHHHHHHHHTTS----C-TTCBCEETTEETTHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHH
T ss_pred cccccCCCCCCHHHHHHHHHHh----h-cccCcccccCChHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHHH
Confidence 4456677776677766654332 1 111222354445566666 67888999864 35568999999999
Q ss_pred HHhhcCCCC--EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673 185 YTAILKPHD--RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (529)
Q Consensus 185 l~all~pGD--~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~ 262 (529)
+.++++||| .|++..+.|...+..+ ......|. ++++++. +++.+|+++|+++. ++++|++++++|
T Consensus 79 l~~~~~~gd~~~vi~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~--~~~~~d~~~l~~~~---~~~~v~~~~p~n 146 (357)
T 3lws_A 79 LRIWSDETDNRTVAYHPLCHLEIHEQD-----GLKELHPI--ETILVGA--ADRLMTLDEIKALP---DIACLLLELPQR 146 (357)
T ss_dssp HHHHHHHHTCCEEEECTTCHHHHSSTT-----HHHHHSSC--EEEECSC--TTSCCCHHHHHTCC---SCSEEEEESSBG
T ss_pred HHHHhhcCCCcEEEecccceeeeeccc-----hhhhccCc--EEEEecC--CCCCcCHHHHhcCc---CcceEEEEcccc
Confidence 999999998 6666655433221100 01122343 6666653 45789999999873 489999998887
Q ss_pred CC---CC---CHHHHHHHHHHhCCEEEEeccccccccc-ccccCCCC-CcccEEEecccccccCCCCeEEEeeCCCcchh
Q 009673 263 PR---DF---DYPRMRQIADAVGALLMMDMAHISGLVA-ASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGV 334 (529)
Q Consensus 263 p~---~~---d~~~i~~ia~~~g~~livD~ah~~Gli~-~~~~~~~~-~~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~ 334 (529)
|+ .. ++++|.++|++||++||+|++|..+... .+.....+ .+.|++++|+||+|.||.||+++.++
T Consensus 147 p~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~------ 220 (357)
T 3lws_A 147 EIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAGAILAGPA------ 220 (357)
T ss_dssp GGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSCEEEEECH------
T ss_pred cCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCceEEEEcCH------
Confidence 53 34 4889999999999999999997632211 11111111 24788899999999899999999887
Q ss_pred HHHhhhcccc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEcc
Q 009673 335 ELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDL 411 (529)
Q Consensus 335 ~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~ 411 (529)
++.+.+.... +.+..........+++ .+++.. .+..++..++++++.+.|++. |+++......++++|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~ 294 (357)
T 3lws_A 221 AFCQTARIWKRRYGGDLISLYPYIVSAD-YYYELR-----KDRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHF 294 (357)
T ss_dssp HHHHHHHHHHHHTTCCCSCCHHHHHHHH-HHHHHH-----TTCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEE
T ss_pred HHHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHH-----HHHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEe
Confidence 6666654321 1111111222222222 345542 122445677788999999885 888743223456778887
Q ss_pred CCCC-CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 412 RPMG-IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 412 ~~~~-i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
...+ .+..++.+.|.++||.+..+..++ + ..+.+|+++.... ...+++++++..+.|.+++
T Consensus 295 ~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~---~-~~~~~r~~i~~~~-~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 295 DGQAADISPKLEQVQEETGLGFVGYLVDK---D-GYCSTEISVGDAY-GELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp ESCHHHHHHHHHHHHHHHCEESCSCCEEC---S-SEEEEEEEBCTTG-GGSCHHHHHHHHHHHHHHC
T ss_pred cCChHHHHHHHHHHHHhcCeEEecccccC---C-CceEEEEEecchh-hhcCHHHHHHHHHHHHHhc
Confidence 5321 124667888999999995542211 1 2347998754322 2256788888888877654
No 144
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.90 E-value=3.6e-22 Score=213.43 Aligned_cols=312 Identities=11% Similarity=-0.033 Sum_probs=205.2
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCCC------CceeeecCChHHHHHHHHHhhc-------------------CCCCEE
Q 009673 141 GGNEYIDELETLCQKRALAAFNLDENK------WGVNVQPLSGSPANFEVYTAIL-------------------KPHDRI 195 (529)
Q Consensus 141 ~g~~~~d~lE~~a~~~la~~~g~~~~~------~~~~V~~~sGs~A~~~~l~all-------------------~pGD~V 195 (529)
...+...++|+.+.+|+++++|.+.+. .+.-|.+++||+||+.++.+.. .|+++|
T Consensus 106 ~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v 185 (475)
T 3k40_A 106 IASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVG 185 (475)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEE
T ss_pred cCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEE
Confidence 335667899999999999999998531 0123556788899998887652 145789
Q ss_pred EEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcC-----CcEEEEcCCC--CCCCCCH
Q 009673 196 MGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAGASA--YPRDFDY 268 (529)
Q Consensus 196 l~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~-----pklIi~~~s~--~p~~~d~ 268 (529)
++....|.+.. +.+...|. +++.++++ +++ +|+++|++++++.+ |.+|+++.++ .+...|+
T Consensus 186 i~s~~~H~s~~--------~~~~~~g~--~~~~v~~d-~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l 253 (475)
T 3k40_A 186 YCSDQAHSSVE--------RAGLLGGV--KLRSVQSE-NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYL 253 (475)
T ss_dssp EEETTSCHHHH--------HHHHHHTC--EEEEECCB-TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCH
T ss_pred EECCCchHHHH--------HHHHHcCC--ceEEEECC-CCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCH
Confidence 98888765432 23344565 66777776 467 99999999997632 6666666433 3348899
Q ss_pred HHHHHHHHHhCCEEEEecccccccccccccCC---CCCcccEEEecccccccCCCC-eEEEeeCCCcchhHH-Hhhhccc
Q 009673 269 PRMRQIADAVGALLMMDMAHISGLVAASVVAD---PFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL-ESAINNA 343 (529)
Q Consensus 269 ~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~---~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l-~~~i~~~ 343 (529)
++|+++|++||+|+++|+||..+....+.... .++.+|++++++|||+.+|.| |+++++++ +. .+.+...
T Consensus 254 ~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~-----~~l~~~~~~~ 328 (475)
T 3k40_A 254 DECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDP-----SWVVNAFNVD 328 (475)
T ss_dssp HHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSG-----GGC-------
T ss_pred HHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCH-----HHHHHHhcCC
Confidence 99999999999999999998766543322211 123579999999999988887 88888774 22 1111100
Q ss_pred ---c------------cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceE
Q 009673 344 ---V------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLV 407 (529)
Q Consensus 344 ---~------------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~ 407 (529)
. .....++.. ....+++.+++.+...++.++.++..++++++.+.|++. |++++.+. ...++
T Consensus 329 ~~yl~~~~~~~~~~~~~~~~~~sr~-~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~-~~~iv 406 (475)
T 3k40_A 329 PLYLKHDMQGSAPDYRHWQIPLGRR-FRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEI-NMGLV 406 (475)
T ss_dssp --------------------CCCGG-GTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCC-BTTEE
T ss_pred ccccCCCcCCCCCCcccccccCCCc-ccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-ceEEE
Confidence 0 001112211 123445556665555677889999999999999999984 99988653 34555
Q ss_pred EEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 408 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 408 ~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
.+.+...+....++.+.|.+.|+.+-. |+ ...+...+|+++... ..+++|++++++.|+++.+.
T Consensus 407 ~f~~~~~~~~~~~l~~~L~~~g~~~~~---~~--~~~g~~~lR~~~~~~---~tt~~di~~~~~~i~~~~~~ 470 (475)
T 3k40_A 407 CFRLKGSNERNEALLKRINGRGHIHLV---PA--KIKDVYFLRMAICSR---FTQSEDMEYSWKEVSAAADE 470 (475)
T ss_dssp EEEESSCHHHHHHHHHHHHHHTSCBCE---EE--EETTEEEEEEECCCT---TCCHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCchHHHHHHHHHHHhCCcEEEE---ee--EECCEEEEEEEeCCC---CCCHHHHHHHHHHHHHHHHH
Confidence 665543222235666777666654311 11 112346799986432 23589999999999988764
No 145
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.89 E-value=9.6e-22 Score=206.74 Aligned_cols=294 Identities=12% Similarity=0.019 Sum_probs=191.8
Q ss_pred HHHHHHcCCCCCCCceeeecCChH-HHHH--HHHHhhcC--C----------CCEEEEcCCCCCcccccccccccccccc
Q 009673 155 KRALAAFNLDENKWGVNVQPLSGS-PANF--EVYTAILK--P----------HDRIMGLDLPHGGHLSHGFMTPKRRVSG 219 (529)
Q Consensus 155 ~~la~~~g~~~~~~~~~V~~~sGs-~A~~--~~l~all~--p----------GD~Vl~~~~~~~g~~s~g~~~~~~~i~~ 219 (529)
+.++++++++++ +|.+++|+ +++. .++.++++ | ||+|++.+|.|.++.. .+..
T Consensus 85 ~~ia~~~~~~~~----~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~--------~~~~ 152 (427)
T 3ppl_A 85 QIWADLLGVPVE----QVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFS--------ITER 152 (427)
T ss_dssp HHHHHHHTSCGG----GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHH--------HHHH
T ss_pred HHHHHHhCCCcc----eEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHH--------HHHH
Confidence 567777888875 45567777 7883 77788877 7 9999999998765431 2344
Q ss_pred ccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCCC--CCCHH---HHHHHH-HHhCCEEEEeccccccc
Q 009673 220 TSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-ASAYPR--DFDYP---RMRQIA-DAVGALLMMDMAHISGL 292 (529)
Q Consensus 220 ~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~-~s~~p~--~~d~~---~i~~ia-~~~g~~livD~ah~~Gl 292 (529)
.|. ++++++++++ + +|+++|++.++..++++|++. +++||+ ..+.+ +|.++| ++||++||+|++|. ++
T Consensus 153 ~g~--~~~~v~~~~~-g-~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~-~~ 227 (427)
T 3ppl_A 153 FGF--EMISVPMNED-G-PDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYA-VH 227 (427)
T ss_dssp TTC--EEEEEEEETT-E-ECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTT-TC
T ss_pred cCC--EEEEeCCCCC-C-CCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCc-cc
Confidence 554 6677777643 3 999999999964478999876 678886 55655 888888 99999999999854 33
Q ss_pred ccccccCCC-----------CCcccEEEecccccc-cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHH
Q 009673 293 VAASVVADP-----------FKYCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL 360 (529)
Q Consensus 293 i~~~~~~~~-----------~~~aDiv~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaal 360 (529)
.+.+....+ ....+++++|+||++ +|+|.||+++++ ++.+.+.........+.+...+.++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~------~l~~~~~~~~~~~~~~~~~~~q~~~- 300 (427)
T 3ppl_A 228 TLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSA------ENRKWYTGHAGIRGIGPNKVNQLAH- 300 (427)
T ss_dssp BSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCH------HHHHHHHHHHHHHCSCCCHHHHHHH-
T ss_pred ccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCH------HHHHHHHHHhhcccCCCCHHHHHHH-
Confidence 322211111 113458899999974 688999999987 6766664432111122333333332
Q ss_pred HHHHHH--hcCchHHHHHHHHHHHHHHHHHHHHh----c-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEc
Q 009673 361 AVCLKH--AQSPEFKVYQNKVVSNCRALASRLVE----L-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 433 (529)
Q Consensus 361 a~al~~--~~~~~~~~~~~~i~~~a~~l~~~L~~----~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~ 433 (529)
+.+++. .....+.+..+.+.++++.+.+.|.+ . ++.+..+ ...+++|+++... +..++.+.|.++||.+.
T Consensus 301 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p-~~g~~~~~~~~~~--~~~~~~~~l~~~gv~v~ 377 (427)
T 3ppl_A 301 ARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVP-AGGYFISLDVVPG--TASRVAELAKEAGIALT 377 (427)
T ss_dssp HHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCC-SBSSCEEEECSTT--CHHHHHHHHHHTTEECC
T ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCC-CccEEEEEECCcc--hHHHHHHHHHHCCCEEe
Confidence 223321 00122355566677777777777765 2 4665544 2356778887542 56778888999999995
Q ss_pred C-CCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 434 K-NSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 434 ~-~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
. +...+......++++||++.. .+++++++.++.|.++++..
T Consensus 378 ~~g~~~~~~~~~~~~~~Ris~~~-----~~~~~i~~~~~~l~~~l~~~ 420 (427)
T 3ppl_A 378 GAGSSYPLRQDPENKNLRLAPSL-----PPVEELEVAMDGVATCVLLA 420 (427)
T ss_dssp CTTTTSGGGCCTTSCEEEECCSS-----SCHHHHHHHHHHHHHHHHHH
T ss_pred cCcCcCCCCCCCCCCeEEEECCC-----CCHHHHHHHHHHHHHHHHHH
Confidence 4 211110001246789999743 25899999999999988754
No 146
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.89 E-value=1.5e-21 Score=206.25 Aligned_cols=321 Identities=18% Similarity=0.199 Sum_probs=209.9
Q ss_pred CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-
Q 009673 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI- 188 (529)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al- 188 (529)
+.+.+++++++++...+...+ |+.+ +...+++ +.+++++|.+. .|.+++|++|+..++.++
T Consensus 37 ~~~~~~~~~~~a~~~~~~~~~--------~~~~-~~~~~l~----~~la~~~g~~~-----~i~~~sGt~a~~~al~~l~ 98 (437)
T 3bb8_A 37 SGKVIGTKELQLMVEASLDGW--------LTTG-RFNDAFE----KKLGEYLGVPY-----VLTTTSGSSANLLALTALT 98 (437)
T ss_dssp CCCCCCHHHHHHHHHHHHHCC--------CBSC-HHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHcCC--------cCCC-hHHHHHH----HHHHHHHCCCc-----EEEeCCHHHHHHHHHHHhh
Confidence 556678899999987775321 2222 3345555 77888999873 466799999999999998
Q ss_pred --------cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 009673 189 --------LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-A 259 (529)
Q Consensus 189 --------l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~-~ 259 (529)
++|||+|++++++|.+... .+...|. +++.++++++++.+|+++|++.+++ ++++|+++ .
T Consensus 99 ~~~~~~~~~~~gd~Vi~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~ 167 (437)
T 3bb8_A 99 SPKLGVRALKPGDEVITVAAGFPTTVN--------PTIQNGL--IPVFVDVDIPTYNVNASLIEAAVSD-KTKAIMIAHT 167 (437)
T ss_dssp CGGGGGGSCCTTCEEEECSSSCHHHHH--------HHHHTTC--EEEECCEETTTTEECGGGHHHHCCT-TEEEEEEECG
T ss_pred hcccccccCCCcCEEEECCCCcHHHHH--------HHHHcCC--EEEEEeccCccCCcCHHHHHHhcCC-CCeEEEEeCC
Confidence 8999999999998765432 2334454 7778877755788999999999987 78998886 3
Q ss_pred CCCCCCCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEeccc--ccccCCCCeEEEeeCCCcchhHHH
Q 009673 260 SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELE 337 (529)
Q Consensus 260 s~~p~~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~h--K~l~GprgG~i~~~~~~~~~~~l~ 337 (529)
+++ ..|+++|.++|+++|+++|+|++|+.|....+ ... -...|+++.|++ |.++|++||+++++++ .+.
T Consensus 168 ~g~--~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~-~~~~d~~~~s~~~~k~l~~g~gg~~~~~~~-----~~~ 238 (437)
T 3bb8_A 168 LGN--LFDLAEVRRVADKYNLWLIEDCCDALGSTYDG-KMA-GTFGDIGTVSFYPAKHITMGEGGAVFTQSA-----ELK 238 (437)
T ss_dssp GGC--CCCHHHHHHHHHHHTCEEEEECTTCTTCEETT-EET-TSSSSEEEEECSTTSSSCCSSCEEEEESCH-----HHH
T ss_pred CCC--hhcHHHHHHHHHHcCCEEEEECccccCceECC-eec-ccccCEEEEECcCCcCCCCCCeEEEEeCCH-----HHH
Confidence 444 47999999999999999999999988866522 111 013688777764 4468889999999863 222
Q ss_pred hhhcc---ccc-----------------------------------CCC-CCCChHHHHHHHHHHHHHhcCchHHHHHHH
Q 009673 338 SAINN---AVF-----------------------------------PGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (529)
Q Consensus 338 ~~i~~---~~~-----------------------------------p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~ 378 (529)
+.+.. ... .+. .+.......++++ +++. +.++.++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~-~l~~-----~~~~~~~ 312 (437)
T 3bb8_A 239 SIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLA-QLER-----IEEFVEK 312 (437)
T ss_dssp HHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHH-HHHH-----HHHHHHH
T ss_pred HHHHHHHHhCcccccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHH-HHHH-----HHHHHHH
Confidence 22111 000 000 0111222222322 2332 2455666
Q ss_pred HHHHHHHHHHHHHhc-CcEEecCCC----CC-ceEEEccCC-CCCcHHHHHHhHhcCCeEEcCCCCCC-CCCC-CC----
Q 009673 379 VVSNCRALASRLVEL-GYKLVSGGS----DN-HLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPG-DKSA-LV---- 445 (529)
Q Consensus 379 i~~~a~~l~~~L~~~-G~~v~~~gt----~~-~~~~v~~~~-~~i~~~~~~~~L~~~GI~v~~~~~Pg-~~~~-~~---- 445 (529)
..++++++.+.|.+. |+.++.... .+ +.+.+.+.. .+++.+++.+.|.+.||.++..+.|. ...+ +.
T Consensus 313 ~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~ 392 (437)
T 3bb8_A 313 RKANFKYLKDALQSCADFIELPEATENSDPSWFGFPITLKEDSGVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKY 392 (437)
T ss_dssp HHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSEEEEECGGGSSCHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCC
T ss_pred HHHHHHHHHHHhhccCCccccCCCCCCCceeeEEEEEEECCcCcCcHHHHHHHHHHCCCceeccCCcccccCchhhccCc
Confidence 688888899999875 766553211 12 122332322 24567889999999999997654321 1001 00
Q ss_pred -------------CCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 446 -------------PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 446 -------------~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.+.|||++.. .++++|++++++.|++++.
T Consensus 393 ~~~~~~~~~~~~~~~~lrl~~~~----~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 393 RVVGELTNTDRIMNQTFWIGIYP----GLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp EECSCCHHHHHHHHHEEEECCST----TCCHHHHHHHHHHHHHHTT
T ss_pred cccCCCcHHHHHhcCEEEecCCC----CCCHHHHHHHHHHHHHHHc
Confidence 1249998764 3569999999999987654
No 147
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.82 E-value=5.3e-25 Score=228.95 Aligned_cols=336 Identities=14% Similarity=0.116 Sum_probs=218.6
Q ss_pred cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCChH
Q 009673 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGS 178 (529)
Q Consensus 103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V~~~sGs 178 (529)
+.|+|..+++ .+++.+++++...+.+. ..+|+. . ..++++...+++.+.+|. +++ +|.+++|+
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-------~-~~~l~~~la~~l~~~~g~~~~~~----~v~~~~g~ 98 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQL-VYGYTY-------A-SDELLQAVLDWEKSEHQYSFDKE----DIVFVEGV 98 (392)
Confidence 4566766554 35788999998776432 122322 1 345666666777777784 443 45556665
Q ss_pred -HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC--CCCCCHHHHHHHhhhcCCcEE
Q 009673 179 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAILFRPKLI 255 (529)
Q Consensus 179 -~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~--~~~iD~d~le~~i~~~~pklI 255 (529)
+|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++++ ++.+|++++++.++..++++|
T Consensus 99 ~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v 168 (392)
T 3b1d_A 99 VPAISIAIQAFTKEGEAVLINSPVYPPFAR--------SVRLNNR--KLVSNSLKEENGLFQIDFEQLENDIVENDVKLY 168 (392)
Confidence 99999999999999999999988765431 2233443 5566666422 356899999999974478999
Q ss_pred EEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccccCCCC-------CcccEEEecccccc--cCCCC
Q 009673 256 IAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-------KYCDVVTTTTHKSL--RGPRG 321 (529)
Q Consensus 256 i~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-------~~aDiv~~S~hK~l--~Gprg 321 (529)
+++.++||+ .. ++++|.++|+++|+++|+|++|.. +...+....++ ...++++.|+||++ +|+|.
T Consensus 169 ~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 247 (392)
T 3b1d_A 169 LLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQD-LTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKN 247 (392)
Confidence 888888876 32 589999999999999999999653 33322111111 12348889999997 67889
Q ss_pred eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-c-CcEEec
Q 009673 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-L-GYKLVS 399 (529)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~-G~~v~~ 399 (529)
|+++++++ ++.+.+.....+...++++....++...+|+.. ...+++..+++.++++.+.+.|++ . |+.+..
T Consensus 248 G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 321 (392)
T 3b1d_A 248 SYAIIENP-----TLCAQFKHQQLVNNHHEVSSLGYIATETAYRYG-KPWLVALKAVLEENIQFAVEYFAQEAPRLKVMK 321 (392)
Confidence 99998763 466666554333222233333333333455532 233467778888889999998876 3 776654
Q ss_pred CCCCCceEEEccCCCCCcHHHHHHhH-hcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 400 GGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 400 ~gt~~~~~~v~~~~~~i~~~~~~~~L-~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+ ..+++.|+++...+.+..++.+.| +++||.+..+..++ +..++++||++. .+++++++.++.|.++++
T Consensus 322 ~-~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~iRi~~~------~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 322 P-QGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYG---SEGELHARLNIA------APKSLVEEICKRIVCCLP 391 (392)
Confidence 3 224445677754334556676777 58999995432221 123568999854 236889888888877654
No 148
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.89 E-value=2e-22 Score=211.65 Aligned_cols=350 Identities=16% Similarity=0.178 Sum_probs=213.3
Q ss_pred hhcccCChH-HHHHHHHHHHHh-hcceeEecC---CC----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHH
Q 009673 81 YSLGEADPE-VCEIITKEKERQ-FKSLELIAS---EN----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELET 151 (529)
Q Consensus 81 ~~l~~~d~~-~~~~~~~e~~~~-~~~i~L~as---en----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~ 151 (529)
+++...+++ ++.+........ .+.|+|..+ ++ ++++.|++++...+.+....+|+. ..| ..++++
T Consensus 26 ~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g---~~~lr~ 99 (420)
T 4f4e_A 26 SAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLP---IDG---IAAYDA 99 (420)
T ss_dssp TTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCC---TTC---CHHHHH
T ss_pred hcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCC---CCC---cHHHHH
Confidence 445666666 444444333222 367888877 32 234899999988776533334432 112 234444
Q ss_pred HHHHHHHHHcCC--CCCCCceeeecCChH-HHHHHH--HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEE
Q 009673 152 LCQKRALAAFNL--DENKWGVNVQPLSGS-PANFEV--YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 226 (529)
Q Consensus 152 ~a~~~la~~~g~--~~~~~~~~V~~~sGs-~A~~~~--l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~ 226 (529)
...+++....+. +++. ++|.+++|+ +|+..+ +.++++|||+|++++|.|.++.. .+...|. ++
T Consensus 100 ~ia~~l~~~~~~~~~~~~--~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~g~--~~ 167 (420)
T 4f4e_A 100 SVQKLLLGDDSPLIAAGR--VVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRA--------LFDMAGF--EV 167 (420)
T ss_dssp HHHHHHHCTTCHHHHTTC--EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHH--------HHHHTTC--CE
T ss_pred HHHHHhcCCCccccccCc--eEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHH--------HHHHcCC--eE
Confidence 443444433321 2221 134556665 999888 56778999999999998765421 2334555 55
Q ss_pred EEccc-CCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEecccccccccccc-
Q 009673 227 MPYRL-DESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV- 297 (529)
Q Consensus 227 v~~~v-~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~- 297 (529)
+.+++ +++++.+|++++++.++.. +++++++++++||+ .. ++++|+++|+++|+++|+|++| .++...+.
T Consensus 168 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y-~~~~~~~~~ 246 (420)
T 4f4e_A 168 VAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAY-QGFGESIEA 246 (420)
T ss_dssp EEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC-TTSSSCTTG
T ss_pred EEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccc-ccccCCcch
Confidence 56655 3356889999999999842 56888888899887 33 4778999999999999999995 45544321
Q ss_pred cCCCC------CcccEEEecccccc--cCCCCeEEEeeCCCcchhHHHh----hhcccccCCCCCCChHHHHHHHHHHHH
Q 009673 298 VADPF------KYCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELES----AINNAVFPGLQGGPHNHTIGGLAVCLK 365 (529)
Q Consensus 298 ~~~~~------~~aDiv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~----~i~~~~~p~~~g~p~~~~iaala~al~ 365 (529)
...++ ...+++++|+||++ +|+|.||+++..+. .++.+ .+.........+.+...+. +++.++.
T Consensus 247 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ 322 (420)
T 4f4e_A 247 DAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDS---KDEAARVLSQLKRVIRTNYSNPPTHGGA-IVAAVLA 322 (420)
T ss_dssp GGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSS---HHHHHHHHHHHHHHHHTTTSSCCSHHHH-HHHHHHH
T ss_pred hhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCC---HHHHHHHHHHHHHHHhcccCCCCHHHHH-HHHHHhc
Confidence 00011 12458899999997 58899998752210 03332 2222111222223333222 2222333
Q ss_pred Hh-----cCchHHHHHHHHHHHHHHHHHHHHhc----CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCC
Q 009673 366 HA-----QSPEFKVYQNKVVSNCRALASRLVEL----GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNS 436 (529)
Q Consensus 366 ~~-----~~~~~~~~~~~i~~~a~~l~~~L~~~----G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~ 436 (529)
.. .....++..+++.++++.+.+.|++. |+.+..+. .+.+.|+++ +.+.+.++|+++||.+.
T Consensus 323 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~~~~~~-----~~~~~~~~l~~~gI~v~--- 393 (420)
T 4f4e_A 323 SPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQ-RGMFSYSGL-----TSAQVDRLREEFGIYAV--- 393 (420)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHS-CSSEEECCC-----CHHHHHHHHHHHCEECC---
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCC-ccEEEEeCC-----CHHHHHHHHHhCCEEec---
Confidence 11 01234677888899999999999885 56554432 234445443 45778888999999983
Q ss_pred CCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 437 VPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 437 ~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
|+ .||++.. +++++++++++.|++++
T Consensus 394 -~~---------~Ris~~~-----~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 394 -ST---------GRICVAA-----LNTRNLDVVANAIAAVL 419 (420)
T ss_dssp -TT---------SEEEGGG-----CCTTTHHHHHHHHHHHH
T ss_pred -CC---------CeEEEec-----CCHHHHHHHHHHHHHHh
Confidence 21 2888643 34688999999998875
No 149
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.89 E-value=7.6e-22 Score=209.22 Aligned_cols=331 Identities=17% Similarity=0.169 Sum_probs=206.7
Q ss_pred ceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 009673 104 SLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (529)
Q Consensus 104 ~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~ 181 (529)
.+++.++.+ .+++.+.+++... .+ .|...+...+++ +.+++++|.+. .+.+++|++|+
T Consensus 44 ylD~~~~~~~~~~~~~~~~a~~~~-~~----------~y~~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~ 103 (456)
T 2ez2_A 44 YIDLLTDSGTNAMSDKQWAGMMMG-DE----------AYAGSENFYHLE----RTVQELFGFKH-----IVPTHQGRGAE 103 (456)
T ss_dssp SEECSCSSSCCCCCHHHHHHHTTC-CC----------CSSSCHHHHHHH----HHHHHHHCCSE-----EEEESSHHHHH
T ss_pred eeeeccccCCccCCHHHHHHhhcc-hh----------hcccChhHHHHH----HHHHHHhCCCc-----EEEeCCcHHHH
Confidence 356555444 4578888888621 11 133334455555 67788888763 35567888999
Q ss_pred HHHHHhhcCCCCEEEEcCCCC-CccccccccccccccccccceEEEEEcccCC----C-----CCCCCHHHHHHHhhhcC
Q 009673 182 FEVYTAILKPHDRIMGLDLPH-GGHLSHGFMTPKRRVSGTSIYFESMPYRLDE----S-----TGLVDYDMLEKTAILFR 251 (529)
Q Consensus 182 ~~~l~all~pGD~Vl~~~~~~-~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~----~-----~~~iD~d~le~~i~~~~ 251 (529)
..++.++++||| +++++.| +... ..+...|. +++.+++++ + ++.+|+++|++++++ +
T Consensus 104 ~~al~~l~~~gd--i~~~~~~~~~~~--------~~~~~~G~--~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~-~ 170 (456)
T 2ez2_A 104 NLLSQLAIKPGQ--YVAGNMYFTTTR--------YHQEKNGA--VFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDE-K 170 (456)
T ss_dssp HHHHHHHCCTTC--EEEESSCCHHHH--------HHHHHTTC--EEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHH-H
T ss_pred HHHHHHhCCCCC--EeccccccchhH--------HHHHHcCC--EEEEecccccccccccccccCCCCHHHHHHHHHh-c
Confidence 999999999999 6667665 3211 13344564 666766652 2 268899999999987 4
Q ss_pred C----cEEEEcCCCC-CC--CCC---HHHHHHHHHHhCCEEEEecccccc---------cccccccCC----CC-CcccE
Q 009673 252 P----KLIIAGASAY-PR--DFD---YPRMRQIADAVGALLMMDMAHISG---------LVAASVVAD----PF-KYCDV 307 (529)
Q Consensus 252 p----klIi~~~s~~-p~--~~d---~~~i~~ia~~~g~~livD~ah~~G---------li~~~~~~~----~~-~~aDi 307 (529)
+ ++|++++++| |+ ..+ +++|+++|++||++||+|++|..| +...+.... .+ ...|+
T Consensus 171 t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ 250 (456)
T 2ez2_A 171 GAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADG 250 (456)
T ss_dssp CGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSE
T ss_pred cccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCE
Confidence 4 8888887776 54 455 999999999999999999998775 333332100 01 24688
Q ss_pred EEecccccccCCCCeEEEeeCCCcchhHHHhhhccccc--CC--CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673 308 VTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVF--PG--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (529)
Q Consensus 308 v~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~--p~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a 383 (529)
+++|+||++..++||+++++++ ++.+.+..... .+ ..++.+...+++++.++..... +++.++..++.
T Consensus 251 ~~~S~kk~~~~~~gG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~---~~~~~~~~~~~ 322 (456)
T 2ez2_A 251 CTMSGKKDCLVNIGGFLCMNDD-----EMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ---YEYIEHRVKQV 322 (456)
T ss_dssp EEEETTTTTCCSSCEEEEESCH-----HHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC---HHHHHHHHHHH
T ss_pred EEEeCcccCCCCceeEEEECCH-----HHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH---HHHHHHHHHHH
Confidence 8888999876567899998542 56554432111 01 1122233344443333332221 45667777788
Q ss_pred HHHHHHHHhcCcEEecCCCCCceEEEccCC--CCCcHHHH-----HHhH-hcCCeEEcC-CC--CCC-----CCCCCCCC
Q 009673 384 RALASRLVELGYKLVSGGSDNHLVLVDLRP--MGIDGARV-----EKIL-DMASITLNK-NS--VPG-----DKSALVPG 447 (529)
Q Consensus 384 ~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~--~~i~~~~~-----~~~L-~~~GI~v~~-~~--~Pg-----~~~~~~~~ 447 (529)
+.+.+.|.+.|++++.+. ..+++++++.. .+.+..++ .+.| +++||.+.. +. .|. .......+
T Consensus 323 ~~l~~~L~~~g~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~ 401 (456)
T 2ez2_A 323 RYLGDKLKAAGVPIVEPV-GGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLE 401 (456)
T ss_dssp HHHHHHHHHTTCCBCSSC-CSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCC
T ss_pred HHHHHHHhcCCCccccCC-CceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCC
Confidence 889999988888766542 35666766521 23333333 5555 788997522 11 111 00011246
Q ss_pred eEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 448 GIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 448 ~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
.|||+++.. ..+++|++++++.|++++..
T Consensus 402 ~iRis~~~~---~~t~e~i~~~~~~l~~~l~~ 430 (456)
T 2ez2_A 402 TVRLTIPRR---VYTYAHMDVVADGIIKLYQH 430 (456)
T ss_dssp EEEEECCTT---TCCHHHHHHHHHHHHHHHHT
T ss_pred eEEEEeCCC---CCCHHHHHHHHHHHHHHHhh
Confidence 899997642 14689999999999998764
No 150
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.89 E-value=2e-21 Score=198.46 Aligned_cols=313 Identities=13% Similarity=0.116 Sum_probs=209.2
Q ss_pred hcceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 009673 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (529)
Q Consensus 102 ~~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs- 178 (529)
+..|+|..++|+ +++.|++++...+. .+ .+|+.. .. .++ ++++++++|++++ +|.+++|+
T Consensus 15 ~~~id~~~~~~~~~~~~~v~~a~~~~~~-~~-~~y~~~------~~-~~l----r~~la~~~~~~~~----~i~~t~g~~ 77 (350)
T 3fkd_A 15 SEIVNFSTTVWTDGDKDHLEKHLVENLN-CI-RHYPEP------DA-GTL----RQMLAKRNSVDNN----AILVTNGPT 77 (350)
T ss_dssp -CCEECSCCSCCCSCCHHHHHHHHHTGG-GG-GSCCCT------TC-HHH----HHHHHHHTTCCGG----GEEEESHHH
T ss_pred ccEEEccCCCCCCCCCHHHHHHHHHhHh-HH-hcCCCC------cH-HHH----HHHHHHHhCcCHH----HEEEcCCHH
Confidence 367888888764 58999999988773 22 234431 11 234 4778889998765 34556666
Q ss_pred HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc-CCCCCCCCHHHHHHHhhhcCCcEEEE
Q 009673 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAILFRPKLIIA 257 (529)
Q Consensus 179 ~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v-~~~~~~iD~d~le~~i~~~~pklIi~ 257 (529)
+|+..++.++. ||+|++.+|.|.+.. ..+...|. +++.+++ +. ...+++ + ++++|++
T Consensus 78 ~al~~~~~~l~--gd~Vi~~~p~~~~~~--------~~~~~~g~--~~~~v~~~~~-~~~~~~--------~-~~~~v~i 135 (350)
T 3fkd_A 78 AAFYQIAQAFR--GSRSLIAIPSFAEYE--------DACRMYEH--EVCFYPSNED-IGEADF--------S-NMDFCWL 135 (350)
T ss_dssp HHHHHHHHHTT--TCEEEEEESCCHHHH--------HHHHHTTC--EEEEEETTSC-GGGSCC--------T-TCSEEEE
T ss_pred HHHHHHHHHHC--CCEEEEeCCCcHHHH--------HHHHHcCC--eEEEEecCCc-cccCcc--------C-CCCEEEE
Confidence 89998988887 999999998775442 12334555 6667666 43 223333 3 7999999
Q ss_pred cCCCCCC--CCCHHHHHHHHHHhC-CEEEEecccccccccccccC-CCCC--cccEEEecccccc--cCCCCeEEEeeCC
Q 009673 258 GASAYPR--DFDYPRMRQIADAVG-ALLMMDMAHISGLVAASVVA-DPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (529)
Q Consensus 258 ~~s~~p~--~~d~~~i~~ia~~~g-~~livD~ah~~Gli~~~~~~-~~~~--~aDiv~~S~hK~l--~GprgG~i~~~~~ 329 (529)
++++||+ ..+.+++.+|++.++ .+||+|++|. ++...+... ..++ ..+++++|+||++ +|.|.|++++++
T Consensus 136 ~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~-~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~- 213 (350)
T 3fkd_A 136 CNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYV-SFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK- 213 (350)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTT-TSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH-
T ss_pred eCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchh-hhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCH-
Confidence 9899886 789999999999876 7999999964 333322111 1111 3458899999986 578899999976
Q ss_pred CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEE
Q 009673 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVL 408 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~ 408 (529)
++.+.+.....++ +++....+++..+++.. ..+.+..++..++++.+.+.|++. |+.+..+ ..++++
T Consensus 214 -----~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~~~ 281 (350)
T 3fkd_A 214 -----DFMKRVAAFSTPW---AVNALAIEAAKFILIHP--AQFTLPIRKWQRNTVDFITALNRLDGVEVHPS--GTTFFL 281 (350)
T ss_dssp -----HHHHHHHTTCCTT---CSCHHHHHHHHHHHHCT--TTTCCCHHHHHHHHHHHHHHHHHSTTEEECCC--SSSEEE
T ss_pred -----HHHHHHHHhCCCC---CCCHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHhcCCCcEECCC--CCcEEE
Confidence 7877776544322 33444444444456532 223233344448889999999885 8887653 345556
Q ss_pred EccCCCCCcHHHHHHhHhc-CCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 409 VDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 409 v~~~~~~i~~~~~~~~L~~-~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
+.+... +..++.+.|.+ +||.+..+... +...+++|||++. +++|++++.+.|++++..
T Consensus 282 ~~~~~~--~~~~l~~~L~~~~gi~v~~g~~f---~~~~~~~iRis~~-------~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 282 LRLKKG--TAAELKKYMLEEYNMLIRDASNF---RGLDESYVRITTQ-------RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp EEESSS--CHHHHHHHHHHTTCEECEECTTS---TTCCTTEEEEECC-------CHHHHHHHHHHHHHHHTC
T ss_pred EECCCC--CHHHHHHHHHHHCCEEEEeCccC---CCCCCCEEEEEcC-------CHHHHHHHHHHHHHHHHH
Confidence 666532 66777777776 99999654322 2234678999863 478999999999887753
No 151
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.89 E-value=2.5e-21 Score=208.36 Aligned_cols=310 Identities=12% Similarity=0.065 Sum_probs=196.4
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC--------CC-----C-EEEEcCCCCCcccccc
Q 009673 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--------PH-----D-RIMGLDLPHGGHLSHG 209 (529)
Q Consensus 144 ~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--------pG-----D-~Vl~~~~~~~g~~s~g 209 (529)
+...++|+.+.+++++++|++.+.- ..+..++||+||..++.++.. +| | +|+++++.|.+..
T Consensus 128 ~~~~~le~~~~~~la~~~g~~~~~~-~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~--- 203 (504)
T 2okj_A 128 PVFVLMEQITLKKMREIVGWSSKDG-DGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK--- 203 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSSSC-EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH---
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCCC-CEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHH---
Confidence 5567889888899999999983111 124445667999998888742 67 7 7888777665432
Q ss_pred ccccccccccccceE-EEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCE
Q 009673 210 FMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAYPR--DFDYPRMRQIADAVGAL 281 (529)
Q Consensus 210 ~~~~~~~i~~~g~~~-~~v~~~v~~~~~~iD~d~le~~i~~~-----~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~ 281 (529)
+.+...|.+. +++.++++ +++.+|+++|++++++. +|++|+++.+++++ ..|+++|+++|++||+|
T Consensus 204 -----~~~~~~g~g~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~ 277 (504)
T 2okj_A 204 -----KAGAALGFGTDNVILIKCN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLW 277 (504)
T ss_dssp -----HHHHHTTSCGGGEEEECBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCE
T ss_pred -----HHHHHcCCCcccEEEEecC-CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCE
Confidence 1223334322 45556665 46899999999999763 48888888766654 78999999999999999
Q ss_pred EEEecccccccccccccCCC---CCcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCC---------
Q 009673 282 LMMDMAHISGLVAASVVADP---FKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGL--------- 348 (529)
Q Consensus 282 livD~ah~~Gli~~~~~~~~---~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~--------- 348 (529)
+++|++|..+.......... +.++|++++++||++.+|.+ |+++++++ ++.+.......+++
T Consensus 278 lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~ 352 (504)
T 2okj_A 278 LHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK-----GILQGCNQMCAGYLFQPDKQYDV 352 (504)
T ss_dssp EEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST-----THHHHHHCCCCSSSCCSCCSSCG
T ss_pred EEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECH-----HHHHHHhcCCCccccCCcccccC
Confidence 99999987665532211111 23689999999999987765 99999874 34332111101111
Q ss_pred ---------CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecC--CCCCceEEEccCCC--
Q 009673 349 ---------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSG--GSDNHLVLVDLRPM-- 414 (529)
Q Consensus 349 ---------~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~--gt~~~~~~v~~~~~-- 414 (529)
+++..... .+++.+++.+...++.++.++..++++++.+.|++ .|++++.+ ...+.+.+......
T Consensus 353 ~~~~~~~~~~~~rr~~~-l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~ 431 (504)
T 2okj_A 353 SYDTGDKAIQCGRHVDI-FKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLR 431 (504)
T ss_dssp GGCCGGGSSCSSCBCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGS
T ss_pred cCCcccCCCCCCCCccH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCcccc
Confidence 11100011 12222333333356788889999999999999988 58998852 22223322222110
Q ss_pred CC------------cHHHHHHhHhcCCe-EEcCCCCCCCCCCCCCCeEEEccC-CCccCCCCHHHHHHHHHHHHHHHH
Q 009673 415 GI------------DGARVEKILDMASI-TLNKNSVPGDKSALVPGGIRIGSP-AMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 415 ~i------------~~~~~~~~L~~~GI-~v~~~~~Pg~~~~~~~~~iRig~~-~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+. ....+.+.|.+.|+ .+......+ .++.+|+++. ..| +++|++++++.|+++..
T Consensus 432 ~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~-----~~~~lRis~~~~~~----t~edi~~~~~~l~~~~~ 500 (504)
T 2okj_A 432 GVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGD-----KANFFRMVISNPAA----TQSDIDFLIEEIERLGQ 500 (504)
T ss_dssp SCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETT-----EEEEEEECCCCTTC----CHHHHHHHHHHHHHHHT
T ss_pred ccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECC-----ceEEEEEEeCCCCC----CHHHHHHHHHHHHHHHH
Confidence 10 02356667777785 443211111 1257999974 444 48999999999987654
No 152
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.89 E-value=1.8e-21 Score=209.01 Aligned_cols=334 Identities=12% Similarity=0.028 Sum_probs=212.1
Q ss_pred CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh---
Q 009673 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--- 188 (529)
Q Consensus 112 n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--- 188 (529)
..+++.+++++.....+... ..|...+...++|+.+++++++++|++.... .+..++|++||..++.++
T Consensus 110 ~~~~~~v~~~~~~~~~n~~~------~~~~~~~~~~~le~~~~~~la~~~g~~~~~~--~~~t~ggt~a~~~al~~ar~~ 181 (497)
T 2qma_A 110 PPLMPAVAAEAMIAALNQSM------DSWDQASSATYVEQKVVNWLCDKYDLSEKAD--GIFTSGGTQSNQMGLMLARDW 181 (497)
T ss_dssp CCBHHHHHHHHHHHHHCCCT------TCGGGCHHHHHHHHHHHHHHHHHTTCCTTCE--EEEESSHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHhhcccc------cchhhChHHHHHHHHHHHHHHHHhCCCCCCC--eEEcCCchHHHHHHHHHHHHH
Confidence 35688888888655543211 1133335678899999999999999975222 344566779999888773
Q ss_pred -c---------CC------CC-EEEEcCCCCCccccccccccccccccccceE-EEEEcccCCCCCCCCHHHHHHHhhhc
Q 009673 189 -L---------KP------HD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILF 250 (529)
Q Consensus 189 -l---------~p------GD-~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~-~~v~~~v~~~~~~iD~d~le~~i~~~ 250 (529)
+ ++ || .|++.++.|.+.. +.+...|.+. +++.++++ +++.+|+++|++.+++.
T Consensus 182 ~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~--------~~~~~~g~g~~~v~~v~~~-~~~~~d~~~L~~~i~~~ 252 (497)
T 2qma_A 182 IADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQ--------KSASWMGLGEKAVMTVDAN-ADGTMDITKLDEVIAQA 252 (497)
T ss_dssp HHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHH--------HHHHHTTSCGGGEEEECBC-TTSSBCGGGHHHHHHHH
T ss_pred HHHhhcccchhhcccccccCCeEEEECCCchHHHH--------HHHHHcCCCcccEEEEecC-CCCcCCHHHHHHHHHHH
Confidence 3 13 46 7888777665432 1223333322 35556666 46899999999999763
Q ss_pred ---C--CcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccccccc--CCCCCcccEEEecccccccCCCC
Q 009673 251 ---R--PKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFKYCDVVTTTTHKSLRGPRG 321 (529)
Q Consensus 251 ---~--pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~~~aDiv~~S~hK~l~Gprg 321 (529)
. |.+|+++.+++++ ..|+++|+++|++||+|+++|++|..+....+.. ...++.+|++++|+|||+.+|.+
T Consensus 253 ~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~ 332 (497)
T 2qma_A 253 KAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTIS 332 (497)
T ss_dssp HHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCSS
T ss_pred HHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCcc
Confidence 2 3367776555543 7899999999999999999999987665433311 01123679999999999987765
Q ss_pred -eEEEeeCCCcchhHHHhhhcccccCCCCC----CChHHH----------HHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673 322 -GMIFFKKDPVLGVELESAINNAVFPGLQG----GPHNHT----------IGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 386 (529)
Q Consensus 322 -G~i~~~~~~~~~~~l~~~i~~~~~p~~~g----~p~~~~----------iaala~al~~~~~~~~~~~~~~i~~~a~~l 386 (529)
|+++++++ ...+.+... ..++.+ .++... ..++..+++.+...++.++.++..++++++
T Consensus 333 ~G~l~~~~~-----~~~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l 406 (497)
T 2qma_A 333 CGALLVNDK-----SNFKFLLHH-ADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEV 406 (497)
T ss_dssp CEEEEESCG-----GGGGGGCC---------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCH-----HHHHHhcCC-chhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 99998774 323333211 011100 111111 123344566555456788889999999999
Q ss_pred HHHHHh-cCcEEecCCCCCceEEEccCCCCCcH----HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc-CCCccCC
Q 009673 387 ASRLVE-LGYKLVSGGSDNHLVLVDLRPMGIDG----ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS-PAMTTRG 460 (529)
Q Consensus 387 ~~~L~~-~G~~v~~~gt~~~~~~v~~~~~~i~~----~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~-~~~tt~g 460 (529)
.+.|++ .|++++.+. ...++.+.+.+.+.+. ..+.+.|.+.|+.+.....+ ...+.+|+++ +..+
T Consensus 407 ~~~L~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~-----~g~~~lRis~~~~~~--- 477 (497)
T 2qma_A 407 ADMIRTNDQFELLAEP-SLSTVLFRATHETADLDELNKALRLEALTRGIAVLGETIV-----DGKTALKFTILNPCL--- 477 (497)
T ss_dssp HHHHHTCTTEEECSCC-SSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEE-----TTEEEEEEECCCTTC---
T ss_pred HHHHhhCCCeEEEcCC-CceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEE-----CCEEEEEEEecCCCC---
Confidence 999998 489886542 2345555554332221 34556777789877321111 1235799987 4443
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 009673 461 FSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 461 ~~~~d~~~la~~i~~~~~ 478 (529)
+++|++++.+.|++++.
T Consensus 478 -t~edi~~~~~~l~~~~~ 494 (497)
T 2qma_A 478 -TTSDFESLLSKINMLAV 494 (497)
T ss_dssp -CHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHH
Confidence 58999999999988764
No 153
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.89 E-value=1e-21 Score=205.44 Aligned_cols=347 Identities=16% Similarity=0.158 Sum_probs=213.4
Q ss_pred hhcccCChH-HHHHHHHHHHHh-hcceeEecCC----C---CCcHHHHHHHhhhh-hccCCCCCCCCCCCCCchhHHHHH
Q 009673 81 YSLGEADPE-VCEIITKEKERQ-FKSLELIASE----N---FTSRAVMEAVGSCL-TNKYSEGLPGKRYYGGNEYIDELE 150 (529)
Q Consensus 81 ~~l~~~d~~-~~~~~~~e~~~~-~~~i~L~ase----n---~~~~~V~eal~~~l-~~~y~~G~p~~r~~~g~~~~d~lE 150 (529)
..+....++ ++.+.+...... .+.|+|..++ + ++++.|.+|+. .+ ......+|.. ..| ..++.
T Consensus 6 ~~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~---~~G---~~~lr 78 (405)
T 3k7y_A 6 SSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLL---GNG---TEDFS 78 (405)
T ss_dssp GGCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCT---TSS---CHHHH
T ss_pred hcCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCC---CCC---cHHHH
Confidence 346666665 555554433222 3668998764 2 35789999876 33 2222223432 123 23566
Q ss_pred HHHHHHHHHHcCCCC-CCCceeeecCChH-HHHHHHHHhhcC--CCCEEEEcCCCCCccccccccccccccccccceEEE
Q 009673 151 TLCQKRALAAFNLDE-NKWGVNVQPLSGS-PANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 226 (529)
Q Consensus 151 ~~a~~~la~~~g~~~-~~~~~~V~~~sGs-~A~~~~l~all~--pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~ 226 (529)
+.+.+++.+..+... +++ ++|..|+|+ +|+..++.++++ | |+|++++|.|.++. ..+...|. ++
T Consensus 79 ~aia~~~~~~~~~~~~~~~-i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~--------~~~~~~g~--~~ 146 (405)
T 3k7y_A 79 TLTQNLIFGNNSKYIEDKK-ICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHV--------NMIESRGF--NL 146 (405)
T ss_dssp HHHHHHHHCSSCTTTTTTC-EEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHH--------HHHHTTTC--EE
T ss_pred HHHHHHHcCCCCccccccc-eEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHH--------HHHHHcCC--eE
Confidence 555566655444331 112 234456666 999999988877 9 99999999876553 13445665 67
Q ss_pred EEccc-CCCCCCCCHHHHHHHhhhc-CCcEEEEcCC-CCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccccc
Q 009673 227 MPYRL-DESTGLVDYDMLEKTAILF-RPKLIIAGAS-AYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (529)
Q Consensus 227 v~~~v-~~~~~~iD~d~le~~i~~~-~pklIi~~~s-~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~ 298 (529)
+.+++ +++++.+|++++++.+++. ++++|+++.+ +||+ .. .+++|.++|++||+++|+|++ |.++.+.+..
T Consensus 147 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~-Y~~l~~~~~~ 225 (405)
T 3k7y_A 147 KYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIA-YQGFGHTNLE 225 (405)
T ss_dssp EEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEES-CTTTSSSSTT
T ss_pred EEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecC-cccccCCCcc
Confidence 77776 4446899999999999753 4578888765 7997 33 477888999999999999998 4555543211
Q ss_pred --CCC---C-C-c-ccEEEecccccc--cCCCCeEEEee--CCCcchhHHHhhh----cccccCCCCCCChHHHHHHHHH
Q 009673 299 --ADP---F-K-Y-CDVVTTTTHKSL--RGPRGGMIFFK--KDPVLGVELESAI----NNAVFPGLQGGPHNHTIGGLAV 362 (529)
Q Consensus 299 --~~~---~-~-~-aDiv~~S~hK~l--~GprgG~i~~~--~~~~~~~~l~~~i----~~~~~p~~~g~p~~~~iaala~ 362 (529)
..+ + . + --+++.|++|++ +|+|.||+++. +. ++.+++ .......+. .++.....+++.
T Consensus 226 ~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~-~~~~~~q~~~~~ 299 (405)
T 3k7y_A 226 EDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQ-----EEKKIVFNNLCFIVRKFYS-SPVIHTNRILCQ 299 (405)
T ss_dssp GGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSH-----HHHHHHHHHHHHHHHTTTS-SCCHHHHHHHHH
T ss_pred cchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCH-----HHHHHHHHHHHHHHhcccC-CCcHHHHHHHHH
Confidence 001 1 1 1 227889999986 69999998652 21 443332 221111122 222222222233
Q ss_pred HHHHh--c---CchHHHHHHHHHHHHHHHHHHHH----hcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCC
Q 009673 363 CLKHA--Q---SPEFKVYQNKVVSNCRALASRLV----ELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAS 429 (529)
Q Consensus 363 al~~~--~---~~~~~~~~~~i~~~a~~l~~~L~----~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~G 429 (529)
++..- . ..+.+.+++++.++++.+.+.|+ +.| +.+..+ ..++++|+.+. .+.+. .|+++|
T Consensus 300 ~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p-~gg~f~~~~l~-----~~~~~-~L~~~g 372 (405)
T 3k7y_A 300 LLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKK-QRGLFSFVPLL-----AKIAE-HLKTHH 372 (405)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSS-CCSSEEECGGG-----GGGTT-TTTTTT
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccC-CceEEEecCCC-----HHHHH-HHHHCC
Confidence 34320 0 12235667778999999999999 766 454443 23456666553 23343 458899
Q ss_pred eEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 430 ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 430 I~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
|.+ +|| + ||++.. .++++++++++.|+++++
T Consensus 373 V~v----~p~--------~-Ris~a~-----~~~~~i~~~~~~i~~~~~ 403 (405)
T 3k7y_A 373 IYI----INN--------G-RINVSG-----ITKNNVDYIADKICLSLS 403 (405)
T ss_dssp EEC----CTT--------S-EEEGGG-----CCTTHHHHHHHHHHHHHH
T ss_pred Eee----cCC--------C-eEEEec-----cCHHHHHHHHHHHHHHHh
Confidence 998 442 2 988643 457999999999998875
No 154
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.88 E-value=1.1e-22 Score=215.61 Aligned_cols=280 Identities=14% Similarity=0.140 Sum_probs=183.7
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 009673 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (529)
Q Consensus 153 a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v 231 (529)
+++++++ +|.+. .+.+++|+ +|+.+++.++++|||+|+++.+.|.+... .+...|. +++.++.
T Consensus 62 ~~~~la~-~g~~~-----~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~--------~~~~~G~--~~~~v~~ 125 (446)
T 2x3l_A 62 SMKQVEK-HSDYD-----GYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLH--------ALDISQQ--EGHFIET 125 (446)
T ss_dssp HHHHHCS-CTTEE-----EEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHH--------HHHHHTC--CEEECEE
T ss_pred HHHHHHh-cCCCc-----eEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHH--------HHHHcCC--eEEEEeC
Confidence 3478889 99872 34557776 99999999999999999999988765431 2334554 4555555
Q ss_pred --CCCC---CCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCC-C-
Q 009673 232 --DEST---GLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K- 303 (529)
Q Consensus 232 --~~~~---~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~- 303 (529)
+++. +.+|+++| +.+ ++++|+++++++.+ ..|+++|.++|++||+++++|++|...+.+.+. +... .
T Consensus 126 ~~~~~~~~~~~~d~~~l---~~~-~~~~v~~~~~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~~~~ 200 (446)
T 2x3l_A 126 HQSPLTNHYNKVNLSRL---NND-GHKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTLNY 200 (446)
T ss_dssp EECTTTSSEEEEEC-----------CCEEEEESSCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCGGGG
T ss_pred eeccccCcCCCCCHHHH---cCC-CceEEEEECCCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCChHHc
Confidence 4221 46788887 444 78999888766544 789999999999999999999998763322222 2111 2
Q ss_pred cccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 009673 304 YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (529)
Q Consensus 304 ~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~ 382 (529)
++|++++|+||++.|+.+ |+++++++.. + ...+.........++++...++++..+++.+...+.+++.++..++
T Consensus 201 g~Di~~~S~~K~l~~~~g~g~l~~~~~~i---~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l 276 (446)
T 2x3l_A 201 QADYVVQSFHKTLPALTMGSVLYIHKNAP---Y-RENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQL 276 (446)
T ss_dssp TCSEEEECHHHHSSSCTTCEEEEEETTCT---T-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred CCCEEEECCccccccccccEEEEEcCCcC---C-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 589999999999877755 9999988421 1 1122211111124567777777777676655432323355555555
Q ss_pred HHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673 383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 462 (529)
Q Consensus 383 a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~ 462 (529)
++.+.+. |++++.+. +...+++++. ++++.++.+.|.+.||.+.. +| .+.+|++++..+ +
T Consensus 277 ~~~l~~~----g~~~~~~~-~~~~l~i~~~--~~~~~~l~~~L~~~GI~v~~---~g------~~~iRi~~~~~~----t 336 (446)
T 2x3l_A 277 IECLENK----GFEMLQVD-DPLKLLIKYE--GFTGHDIQNWFMNAHIYLEL---AD------DYQALAILPLWH----H 336 (446)
T ss_dssp HHHHHHH----TCEEEECS-STTEEEEECT--TSCHHHHHHHHHHTTEEESE---EC------SSCEEEECCCCC----T
T ss_pred HHHHHHc----CCEECcCC-CCeEEEEEeC--CcCHHHHHHHHHHCCCEEEe---cC------CCEEEEEeecCC----C
Confidence 5554444 88887642 3334666664 56788888888888999952 22 367999976543 4
Q ss_pred HHHHHHHHHHHHHHHH
Q 009673 463 EKEFVAIADFIHEGVE 478 (529)
Q Consensus 463 ~~d~~~la~~i~~~~~ 478 (529)
++|+ ++++.|+++++
T Consensus 337 ~e~i-~l~~aL~~~~~ 351 (446)
T 2x3l_A 337 DDTY-LFDSLLRKIED 351 (446)
T ss_dssp TCCC-CHHHHHHHHHT
T ss_pred HHHH-HHHHHHHHHHH
Confidence 6889 99998888764
No 155
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.88 E-value=2.3e-21 Score=202.26 Aligned_cols=321 Identities=16% Similarity=0.176 Sum_probs=196.4
Q ss_pred eEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHH
Q 009673 106 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (529)
Q Consensus 106 ~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l 185 (529)
....+.+++.+.+.+++.. +.+. ..+|...|+ +++..++++ +++++++|.+. .+.++||++|+..++
T Consensus 31 p~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~r~--~~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~a~~~~l 97 (398)
T 1gc0_A 31 PVYQTATFTFPTVEYGAAC-FAGE-QAGHFYSRI--SNPTLNLLE----ARMASLEGGEA-----GLALASGMGAITSTL 97 (398)
T ss_dssp CBCCCSCBCCC-------------------------CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHH
T ss_pred CccCCCccccCCHHHHHHh-hcCC-cCCCcccCC--CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHH
Confidence 3445666777777777642 2222 122322222 345555555 77888999862 466799999999999
Q ss_pred HhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-
Q 009673 186 TAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR- 264 (529)
Q Consensus 186 ~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~- 264 (529)
.++++|||+|+++++.|+++..... ......|. +++.++. .|++++++.+++ ++++|++++++||+
T Consensus 98 ~~~~~~gd~vl~~~~~~~~~~~~~~----~~~~~~g~--~~~~~~~------~d~~~l~~~i~~-~~~~v~~~~~~nptG 164 (398)
T 1gc0_A 98 WTLLRPGDEVLLGNTLYGCTFAFLH----HGIGEFGV--KLRHVDM------ADLQALEAAMTP-ATRVIYFESPANPNM 164 (398)
T ss_dssp HHHCCTTCEEEEESSCCSHHHHHHH----HTGGGGTC--EEEEECT------TCHHHHHHHCCT-TEEEEEEESSCTTTC
T ss_pred HHHhcCCCEEEEeCCCchhHHHHHH----HHHHHcCC--EEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCc
Confidence 9999999999999998876542110 00123343 5555543 389999999987 89999999888875
Q ss_pred -CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHh-
Q 009673 265 -DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELES- 338 (529)
Q Consensus 265 -~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~- 338 (529)
..|+++|.++|+++|+++|+|++|..+... .++. ++|+++.|+||++.||. +|++++++ ++..
T Consensus 165 ~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~-----~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~------~~~~~ 233 (398)
T 1gc0_A 165 HMADIAGVAKIARKHGATVVVDNTYCTPYLQ-----RPLELGADLVVHSATKYLSGHGDITAGIVVGSQ------ALVDR 233 (398)
T ss_dssp CCCCHHHHHHHHGGGTCEEEEECTTTHHHHC-----CGGGGTCSEEEEETTTTTTCSSSCCCEEEEECH------HHHHH
T ss_pred ccccHHHHHHHHHHcCCEEEEECCCcccccC-----CchhhCceEEEECCccccCCCCCCeEEEEEECh------HHHHH
Confidence 779999999999999999999998766532 1222 58999999999997664 59999887 4333
Q ss_pred hhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcE--------------EecC--C
Q 009673 339 AINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK--------------LVSG--G 401 (529)
Q Consensus 339 ~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~--------------v~~~--g 401 (529)
.+.........++.+....+++..+++ .+..+.++..++++.+.+.|.+. ++. +..+ .
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~ 308 (398)
T 1gc0_A 234 IRLQGLKDMTGAVLSPHDAALLMRGIK-----TLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMS 308 (398)
T ss_dssp HHHTHHHHHTCCCCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------
T ss_pred HHHHHhhccCCCCCCHHHHHHHHhccc-----hHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCC
Confidence 443322110122333333332222332 34566778888999999999873 222 1111 0
Q ss_pred CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCC---------------C-------CCCCCeEEEccCCCccC
Q 009673 402 SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---------------S-------ALVPGGIRIGSPAMTTR 459 (529)
Q Consensus 402 t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~---------------~-------~~~~~~iRig~~~~tt~ 459 (529)
...+++.+.+.. +.+.+.++|++.||.+...+. |+. + ...++.|||++...+
T Consensus 309 ~~~~~~~~~l~~---~~~~~~~~l~~~~i~~~~~s~-G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~-- 382 (398)
T 1gc0_A 309 QPGGMIAFELKG---GIGAGRRFMNALQLFSRAVSL-GDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLED-- 382 (398)
T ss_dssp CCTTEEEEEETT---HHHHHHHHHHHCSSSEECSCC-SCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSC--
T ss_pred CCceEEEEEECC---CHHHHHHHHHhCCCceeccCC-CCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCC--
Confidence 124455555532 235677888888877643111 100 0 012478999987543
Q ss_pred CCCHHHHHHHHHHHHHH
Q 009673 460 GFSEKEFVAIADFIHEG 476 (529)
Q Consensus 460 g~~~~d~~~la~~i~~~ 476 (529)
++++++.+.++|+++
T Consensus 383 --~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 383 --IDDLLADVQQALKAS 397 (398)
T ss_dssp --HHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHhc
Confidence 478888888887653
No 156
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.88 E-value=6e-22 Score=201.41 Aligned_cols=302 Identities=16% Similarity=0.135 Sum_probs=205.0
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC---CCCCCCceeeecCCh
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN---LDENKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g---~~~~~~~~~V~~~sG 177 (529)
..|+|..+++. +++.|++++...+...-..+|+.. + ..+++ +.++++++ ++++ +|.+++|
T Consensus 20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~----~---~~~lr----~~la~~~~~~~~~~~----~v~~~~G 84 (335)
T 1uu1_A 20 DKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDS----P---DEELI----EKILSYLDTDFLSKN----NVSVGNG 84 (335)
T ss_dssp CSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCCS----S---CHHHH----HHHHHHHTCSSCCGG----GEEEESS
T ss_pred cceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC----c---hHHHH----HHHHHHcCCCCCCHH----HEEEcCC
Confidence 45888887773 589999999887632112233321 1 23444 66777888 6654 3555666
Q ss_pred H-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673 178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (529)
Q Consensus 178 s-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi 256 (529)
+ +++..++.++ ||+|+++ |.|.++.. .+...|. +++.++++ +++.+|++++ + ++++|+
T Consensus 85 ~~~al~~~~~~~---gd~Vl~~-p~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l-----~-~~~~v~ 143 (335)
T 1uu1_A 85 ADEIIYVMMLMF---DRSVFFP-PTYSCYRI--------FAKAVGA--KFLEVPLT-KDLRIPEVNV-----G-EGDVVF 143 (335)
T ss_dssp HHHHHHHHHHHS---SEEEECS-SSCHHHHH--------HHHHHTC--EEEECCCC-TTSCCCCCCC-----C-TTEEEE
T ss_pred hHHHHHHHHHHh---CCcEEEC-CCcHHHHH--------HHHHcCC--eEEEeccC-CCCCCCHHHc-----C-CCCEEE
Confidence 5 8998888888 9999999 87754321 2233454 66777775 3467888776 3 789999
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC--cccEEEecccccc--cCCCCeEEEeeCCC
Q 009673 257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDP 330 (529)
Q Consensus 257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~--~aDiv~~S~hK~l--~GprgG~i~~~~~~ 330 (529)
++.|+||+ ..+.+++.++++.+| ++|+|++|.. +....... .++ ..+++++|+||++ +|+|.|++++++
T Consensus 144 l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~-~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-- 218 (335)
T 1uu1_A 144 IPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYE-FHGESYVD-FLKKYENLAVIRTFSKAFSLAAQRVGYVVASE-- 218 (335)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHH-HHCCCCGG-GGGTCSSEEEEEESTTTTTCGGGCCEEEEECH--
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchh-hcchhHHH-HhhhCCCEEEEecchhhcCCcccCeEEEEeCH--
Confidence 88888886 789999999999889 9999999763 22111010 011 3568999999997 577889999976
Q ss_pred cchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEc
Q 009673 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD 410 (529)
Q Consensus 331 ~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~ 410 (529)
++.+.+.....++ +++....+++..+++. ...+++..+++.++++++.+.|.+.|+.+..+ ...+++++
T Consensus 219 ----~~~~~l~~~~~~~---~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~~~~ 287 (335)
T 1uu1_A 219 ----KFIDAYNRVRLPF---NVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREMGYRITDS--RGNFVFVF 287 (335)
T ss_dssp ----HHHHHHHHHSCTT---CSCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC--CSSEEEEE
T ss_pred ----HHHHHHHHhcCCC---CcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHCCcEEcCC--CCeEEEEE
Confidence 6777665543322 3344445555555653 12457778888999999999998878776433 24556777
Q ss_pred cCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 411 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 411 ~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
+.. .+..++.+.|.++||.+.. .++++||++. +++|++++++.|++
T Consensus 288 ~~~--~~~~~~~~~l~~~gi~v~~----------~~~~iRis~~-------~~~~i~~~~~~l~~ 333 (335)
T 1uu1_A 288 MEK--EEKERLLEHLRTKNVAVRS----------FREGVRITIG-------KREENDMILRELEV 333 (335)
T ss_dssp CCT--HHHHHHHHHHHHHTEEEEE----------ETTEEEEECC-------CHHHHHHHHHHHHC
T ss_pred CCC--CCHHHHHHHHHHCCEEEEE----------CCCeEEEEeC-------CHHHHHHHHHHHHh
Confidence 643 3456677788788999954 2468999963 25788888888765
No 157
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.88 E-value=6.2e-22 Score=210.45 Aligned_cols=335 Identities=12% Similarity=0.097 Sum_probs=206.9
Q ss_pred CCCCcHHHHHHHhhhhhccCCCCCC-CCCCC------CCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHH
Q 009673 111 ENFTSRAVMEAVGSCLTNKYSEGLP-GKRYY------GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANF 182 (529)
Q Consensus 111 en~~~~~V~eal~~~l~~~y~~G~p-~~r~~------~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~ 182 (529)
..+.++.|.+++.......|..+.. ...+. .+.+...++++.+++++++++|++.+ .+...+|+ .+|.
T Consensus 89 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~----~~~t~g~te~a~~ 164 (456)
T 2z67_A 89 IGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTNKILESFFKQLGLNVH----AIATPISTGMSIS 164 (456)
T ss_dssp CSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHHHHHHHHHHHHHTTCCCE----EEEESSCHHHHHH
T ss_pred cccccccccccccCccccccCCCccHHHHHHhhCcccccCcHHHHHHHHHHHHHHHHcCCCCC----EEEeCcHHHHHHH
Confidence 3466777888776543222221111 00111 11122566777889999999999863 13345556 5677
Q ss_pred HHHHhhcC--CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC--CCCCCCCHHHHHHHh-hh---cCCcE
Q 009673 183 EVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD--ESTGLVDYDMLEKTA-IL---FRPKL 254 (529)
Q Consensus 183 ~~l~all~--pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~--~~~~~iD~d~le~~i-~~---~~pkl 254 (529)
.++.++.. +||.|++++++|.+.. +.+...|. +++.+++. .+++.+|+++|++++ ++ .++.+
T Consensus 165 ~al~~~~~~~~~~~vi~~~~~h~s~~--------~~~~~~G~--~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 234 (456)
T 2z67_A 165 LCLSAARKKYGSNVVIYPYASHKSPI--------KAVSFVGM--NMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPC 234 (456)
T ss_dssp HHHHHHHHHHCCCEEEEECCCCHHHH--------HHHHHTTC--EEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHhcCCCEEEEECCCcHHHH--------HHHHHcCC--CceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEE
Confidence 66766543 7888998888775432 23344565 45444442 246899999999999 42 36777
Q ss_pred EEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccc---cccccCCCCCcccEEEecccccccCCCC-eEEEeeC
Q 009673 255 IIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLV---AASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKK 328 (529)
Q Consensus 255 Ii~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli---~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~ 328 (529)
|++..++|++ ..|+++|.++|+++|+++++|+||..... ..+...... ++|++++|+||++.||.| |++++++
T Consensus 235 vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~-~~D~~~~s~hK~~~~p~g~G~l~~~~ 313 (456)
T 2z67_A 235 VLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY-RVDAVVSSSDKNLLTPIGGGLVYSTD 313 (456)
T ss_dssp EEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS-CCSEEEEEHHHHHCCCSSCEEEEESC
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC-CCCEEEEcCCCCcCCCCCeEEEEEcC
Confidence 7777776654 78999999999999999999988653322 111100011 589999999999877665 9999965
Q ss_pred CCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----CcEEecCCCCC
Q 009673 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GYKLVSGGSDN 404 (529)
Q Consensus 329 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~----G~~v~~~gt~~ 404 (529)
+ ++.+.+... +.+... .. ...++..++..+...++++..++..++++++.+.|++. |+.++.+.
T Consensus 314 ~-----~~~~~l~~~-~~g~~~--~~-~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~~--- 381 (456)
T 2z67_A 314 A-----EFIKEISLS-YPGRAS--AT-PVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVE--- 381 (456)
T ss_dssp H-----HHHHHHHTT-SCSCBC--SH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCCC---
T ss_pred H-----HHHhhcCcC-CCCCCC--CC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecCCC---
Confidence 3 566666432 222211 11 23334445554444567888899999999999999885 87666542
Q ss_pred ceEEEccCCCCCcHHHHHHhHhcCCe---EEcCCC--CCCCC-CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 405 HLVLVDLRPMGIDGARVEKILDMASI---TLNKNS--VPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 405 ~~~~v~~~~~~i~~~~~~~~L~~~GI---~v~~~~--~Pg~~-~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
.++++++...+. ..++.+.|.+.|| .+.... .+|.. .....+++|+++.. +.+++|++++++.|++++
T Consensus 382 ~~v~~~~~~~~~-~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~----~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 382 SPIASCISVNSD-PVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAI----GVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp CSSEEEEECSSC-HHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCT----TCCHHHHHHHHHHHHTC-
T ss_pred CeEEEEEecccH-HHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhc----CCCHHHHHHHHHHHHHHh
Confidence 344555521121 3567777877775 332000 00110 01124689998654 345899999999987654
No 158
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.88 E-value=2.3e-21 Score=210.07 Aligned_cols=340 Identities=14% Similarity=0.144 Sum_probs=207.9
Q ss_pred eeEecCCC-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc-C-CCCCCCceeeecCChH-HH
Q 009673 105 LELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-N-LDENKWGVNVQPLSGS-PA 180 (529)
Q Consensus 105 i~L~asen-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~-g-~~~~~~~~~V~~~sGs-~A 180 (529)
|+|..++. ..++.+++++...+.. .+|+ .......++++.+.+++.+.+ + ++.+.. .+|.+++|+ +|
T Consensus 106 i~l~~g~~~~~~~~~v~a~~~~~~~---~~y~-----~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~-~~i~~t~G~t~a 176 (533)
T 3f6t_A 106 VNYCHTELGLNRDKVVAEWVNGAVA---NNYP-----VPDRCLVNTEKIINYFLQELSYKDANLAEQ-TDLFPTEGGTAA 176 (533)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHT---CSCC-----SSSSCCHHHHHHHHHHHHHHHTTTCCCGGG-EEEEEEEHHHHH
T ss_pred eeccCCCCCcCCcHHHHHHHHHHHh---CCCC-----CCcccHHHHHHHHHHHHHHhcCCCCCCCCc-ceEEEECCHHHH
Confidence 44544442 3466777766655532 1222 111223466666667776662 3 333211 255667776 89
Q ss_pred HHHHHHh-----hcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC---CCCCCCCHHHHHHHhhhcCC
Q 009673 181 NFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD---ESTGLVDYDMLEKTAILFRP 252 (529)
Q Consensus 181 ~~~~l~a-----ll~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~---~~~~~iD~d~le~~i~~~~p 252 (529)
+..++.+ +++|||+|++++|.|.++.. .+...|. +++.++++ .+++.+|+++|++++++ ++
T Consensus 177 l~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~~d~~~l~~~l~~-~~ 245 (533)
T 3f6t_A 177 IVYAFHSLAENHLLKKGDKIAINEPIFTPYLR--------IPELKDY--ELVEVDLHSYEKNDWEIEPNEIEKLKDP-SI 245 (533)
T ss_dssp HHHHHHHHHHTTSSCTTCEEEEESSCCHHHHT--------SGGGGGS--EEEEECCCEETTTTSEECHHHHHHHSCT-TE
T ss_pred HHHHHHHhhhhhccCCcCEEEEcCCCcHHHHH--------HHHHcCC--eEEEEEecCCcccCCCCCHHHHHHHhCC-CC
Confidence 9988888 79999999999998865532 2334555 44444453 24578999999999987 89
Q ss_pred cEEEEcCCCCCC--CCCHH---HHHHHHH-HhCCEEEEecccccccccccccCCCC----CcccEEEecccccc--cCCC
Q 009673 253 KLIIAGASAYPR--DFDYP---RMRQIAD-AVGALLMMDMAHISGLVAASVVADPF----KYCDVVTTTTHKSL--RGPR 320 (529)
Q Consensus 253 klIi~~~s~~p~--~~d~~---~i~~ia~-~~g~~livD~ah~~Gli~~~~~~~~~----~~aDiv~~S~hK~l--~Gpr 320 (529)
++|++++|+||+ ..+.+ +|.++|+ ++|+++|+|++|. ++.... .++ ...++++.|+||++ +|+|
T Consensus 246 k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~-~~~~~~---~~~~~~~~~~~i~~~S~SK~~g~~G~R 321 (533)
T 3f6t_A 246 KALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYG-AFVPNF---KSIYSVVPYNTMLVYSYSKLFGCTGWR 321 (533)
T ss_dssp EEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTG-GGSTTC---CCHHHHSGGGEEEEEESHHHHTCGGGC
T ss_pred eEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCcc-ccccCc---cCHhhcCCCCEEEEecCcccCCCcccc
Confidence 999998888886 55544 7888888 5899999999965 443221 111 13459999999987 6888
Q ss_pred CeEEEeeCCCcchhHHHhhh--------------------------------cccccCCCCCCChHHHHHHHHHHHHHh-
Q 009673 321 GGMIFFKKDPVLGVELESAI--------------------------------NNAVFPGLQGGPHNHTIGGLAVCLKHA- 367 (529)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i--------------------------------~~~~~p~~~g~p~~~~iaala~al~~~- 367 (529)
.|+++++++.. ...+.+.+ .........+.+...+.++...++..+
T Consensus 322 iG~l~~~~~~~-~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~ 400 (533)
T 3f6t_A 322 LGVIALNEKNV-FDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLL 400 (533)
T ss_dssp EEEEEEESSCH-HHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHT
T ss_pred eEEEEECcHHH-HHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHh
Confidence 99999988410 00022111 111111112333333333211122222
Q ss_pred -------cCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC-----C----------CcH-HHHHHh
Q 009673 368 -------QSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM-----G----------IDG-ARVEKI 424 (529)
Q Consensus 368 -------~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~-----~----------i~~-~~~~~~ 424 (529)
.....++..+.+.++++.+.+.|. .++.+..+ ....+.|+++... + .+. +.+.++
T Consensus 401 ~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~~~~~~~~-~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~l 478 (533)
T 3f6t_A 401 TSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-APKDETDT-NTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKL 478 (533)
T ss_dssp TCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-CCCCCSTT-BCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHH
T ss_pred hhccccchHHHHHHHHHHHHHHHHHHHHhcC-CCccccCC-CceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHH
Confidence 123346777788888999999986 66654433 2345567666420 1 233 445677
Q ss_pred HhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 425 LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 425 L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
|+++||.+. ||......++++||++.. +++++++++++.|.+++...
T Consensus 479 l~~~GV~v~----pg~~f~~~~~~iRls~a~-----~~~e~i~~~i~~L~~~l~~~ 525 (533)
T 3f6t_A 479 AEKNGVVLV----DGVGFGAKPGELRVSQAN-----LPTEDYALIGKQVLELLKEY 525 (533)
T ss_dssp HHHTTSSSC----TTEEECSSTTEEEEESSS-----SCHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCEEEe----CCcccCCCCCEEEEEEee-----CCHHHHHHHHHHHHHHHHHH
Confidence 788999984 443211135789999743 45899999999999988754
No 159
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.88 E-value=1.1e-21 Score=216.95 Aligned_cols=296 Identities=17% Similarity=0.134 Sum_probs=204.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccce
Q 009673 145 YIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 223 (529)
Q Consensus 145 ~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~ 223 (529)
.+.++| ++++++||++.. +.+++|+ .||.+++.++++|||+|+++.+.|.++.. .+...|+
T Consensus 196 ~i~eaE----~~lA~~fGa~~a-----~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~--------~l~lsGa- 257 (715)
T 3n75_A 196 PHKEAE----QYIARVFNADRS-----YMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTH--------LMMMSDV- 257 (715)
T ss_dssp HHHHHH----HHHHHHHTCSEE-----EEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHSCC-
T ss_pred HHHHHH----HHHHHHhCCCCc-----eEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHH--------HHHHcCC-
Confidence 345555 788999999863 4458886 99999999999999999999988765532 3445665
Q ss_pred EEEEEcccCCCCCC----C-----CHHHHHHHhhhc-C---CcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEecccc
Q 009673 224 FESMPYRLDESTGL----V-----DYDMLEKTAILF-R---PKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHI 289 (529)
Q Consensus 224 ~~~v~~~v~~~~~~----i-----D~d~le~~i~~~-~---pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~ 289 (529)
+++.++.+.+++. + |+++|+++++++ + |++++++++++.+ ..|+++|.++|+++ .+++|+||+
T Consensus 258 -~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~pn~~G~v~dl~~I~ela~~~--~livDEAH~ 334 (715)
T 3n75_A 258 -TPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVK--SIHFDSAWV 334 (715)
T ss_dssp -EEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESSCTTSEEECHHHHHHHCCCS--EEEEECTTC
T ss_pred -EEEEEeccccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECCCCCCccCCHHHHHHHhCcC--cEEEccccc
Confidence 6666655433333 3 899999999863 2 3478887775544 78999999999866 379999998
Q ss_pred cccccccccC--CCCC---cccEE---EecccccccCC-CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHH
Q 009673 290 SGLVAASVVA--DPFK---YCDVV---TTTTHKSLRGP-RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL 360 (529)
Q Consensus 290 ~Gli~~~~~~--~~~~---~aDiv---~~S~hK~l~Gp-rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaal 360 (529)
.++.+.+..+ +.+. .+|++ ++|+||+|+|+ .+|+++++++. ...+++........++|+...++++
T Consensus 335 ~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i-----~~~~~~~~~~~~~STSpsy~~~Asl 409 (715)
T 3n75_A 335 PYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDV-----NEETFNEAYMMHTTTSPHYGIVAST 409 (715)
T ss_dssp TTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCC-----CHHHHHHHHHHTSCSSCCHHHHHHH
T ss_pred cccccCCccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchh-----hHHHHHHHHHhhcCCCchHHHHHHH
Confidence 8764433222 2332 26765 89999999998 56999998741 2233444333334678899999999
Q ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-----C--cEEecCC----------------------------CCCc
Q 009673 361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-----G--YKLVSGG----------------------------SDNH 405 (529)
Q Consensus 361 a~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-----G--~~v~~~g----------------------------t~~~ 405 (529)
.+|++.+...+.+++.++..++++++++.|++. | +.++.+. .|.-
T Consensus 410 daA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~ 489 (715)
T 3n75_A 410 ETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPI 489 (715)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTT
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCe
Confidence 989887653245678899999999999999773 2 4554321 0111
Q ss_pred eEEEccCC---------CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 406 LVLVDLRP---------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 406 ~~~v~~~~---------~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
-++++++. .|+++..+.+.|+++||.+.... ...|= .+.+.|-++++++++.++|.++
T Consensus 490 Kl~i~~~~~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~~d---------~~~vl----~l~s~g~~~~~~~~L~~aL~~~ 556 (715)
T 3n75_A 490 KVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTG---------PYNLL----FLFSIGIDKTKALSLLRALTDF 556 (715)
T ss_dssp EEEEECSCBCTTSCBCSSCCCHHHHHHHHHHTTCCCSEEE---------TTEEE----EECCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCCCccccCCCcHHHHHHHHHHCCCEEEecC---------CCcEE----EEeCCCCCHHHHHHHHHHHHHH
Confidence 12334432 26778899999999999986531 12222 2445577889999999998876
Q ss_pred HHH
Q 009673 477 VEI 479 (529)
Q Consensus 477 ~~~ 479 (529)
-..
T Consensus 557 ~~~ 559 (715)
T 3n75_A 557 KRA 559 (715)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 160
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.88 E-value=8.6e-22 Score=205.04 Aligned_cols=328 Identities=16% Similarity=0.162 Sum_probs=198.1
Q ss_pred cceeEecCC--CC-----CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC--CCCCceeee
Q 009673 103 KSLELIASE--NF-----TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQ 173 (529)
Q Consensus 103 ~~i~L~ase--n~-----~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~--~~~~~~~V~ 173 (529)
+.|+|..+. ++ +.+.+.+++...+.+....+|+. ..| ..++.+.+.+++.+.+|.+ ++++ .+.
T Consensus 29 ~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g---~~~lr~~ia~~~~~~~~~~~~~~~i--~~v 100 (401)
T 7aat_A 29 KKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLP---IAG---LADFTRASAELALGENSEAFKSGRY--VTV 100 (401)
T ss_dssp TCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCC---TTC---CHHHHHHHHHHHHCTTCHHHHTTCE--EEE
T ss_pred CceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCC---CCC---CHHHHHHHHHHhcCCCccccccCce--EEE
Confidence 358887655 21 23578888876654322334432 112 2355544445555544532 4321 112
Q ss_pred cCChH-HHHHHHHHhh---cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-CCCCCCCHHHHHHHhh
Q 009673 174 PLSGS-PANFEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAI 248 (529)
Q Consensus 174 ~~sGs-~A~~~~l~al---l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-~~~~~iD~d~le~~i~ 248 (529)
.|+|+ +|+..++.++ ++|||+|++++|.|.++.. .+...|. +++.++++ ++++.+|++++++.++
T Consensus 101 ~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~ 170 (401)
T 7aat_A 101 QGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTP--------IFRDAGL--QLQAYRYYDPKTCSLDFTGAMEDIS 170 (401)
T ss_dssp EEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECEETTTTEECHHHHHHHHT
T ss_pred ecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHH--------HHHHcCC--eeEeeeeeccccCccCHHHHHHHHH
Confidence 15555 9999877665 4999999999998876532 2344565 56666653 2368899998877775
Q ss_pred h--cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccccc--CCCC------CcccEEEeccc
Q 009673 249 L--FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPF------KYCDVVTTTTH 313 (529)
Q Consensus 249 ~--~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~--~~~~------~~aDiv~~S~h 313 (529)
. .+++++++++++||+ .. ++++|.++|++||+++++|++|. ++...+.. ..++ ....+++.|+|
T Consensus 171 ~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s 249 (401)
T 7aat_A 171 KIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQ-GFASGDINRDAWALRHFIEQGIDVVLSQSYA 249 (401)
T ss_dssp TSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT-TTTTSCHHHHTHHHHHHHHTTCCCEEEEECT
T ss_pred hCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccc-cccCCCccccHHHHHHHHhcCCcEEEEecCC
Confidence 4 257888999999997 33 57889999999999999999954 33332210 0000 12348899999
Q ss_pred ccc--cCCCCeEEEeeCCCcchhH----HHhhhcccccCCCCCCChHHHHHHHHHHHHH--hc---CchHHHHHHHHHHH
Q 009673 314 KSL--RGPRGGMIFFKKDPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVCLKH--AQ---SPEFKVYQNKVVSN 382 (529)
Q Consensus 314 K~l--~GprgG~i~~~~~~~~~~~----l~~~i~~~~~p~~~g~p~~~~iaala~al~~--~~---~~~~~~~~~~i~~~ 382 (529)
|++ +|+|.|++++..... + +...+.....+...+.+.. ..++.+.++.. +. ....++..+++.++
T Consensus 250 K~~~~~G~RiG~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 325 (401)
T 7aat_A 250 KNMGLYGERAGAFTVICRDA---EEAKRVESQLKILIRPMYSNPPMN-GARIASLILNTPELRKEWLVEVKGMADRIISM 325 (401)
T ss_dssp TTSCCGGGCEEEEEEECSSH---HHHHHHHHHHHHHHHHHHSSCCHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCceEEEEEEeCCH---HHHHHHHHHHHHHHHhccCCCChH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 997 788889988733100 2 3333332221112222222 22222222321 00 12346677888899
Q ss_pred HHHHHHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCcc
Q 009673 383 CRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTT 458 (529)
Q Consensus 383 a~~l~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt 458 (529)
++.+.+.|.+.| +.+..+. .+++.|+++ +.+.+..+|+++||.+. .++||++..++
T Consensus 326 r~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~ll~~~gi~v~-------------~~~Ris~~~~~- 385 (401)
T 7aat_A 326 RTQLVSNLKKEGSSHNWQHITDQ-IGMFCFTGL-----KPEQVERLTKEFSIYMT-------------KDGRISVAGVA- 385 (401)
T ss_dssp HHHHHHHHHHTTCCSCCHHHHHC-CSSEEECCC-----CHHHHHHHHHHHCEECC-------------TTCEEEGGGCC-
T ss_pred HHHHHHHHHhcCCCCCCceecCC-cceEEecCC-----CHHHHHHHHHhCCEecc-------------CCCeEEeccCC-
Confidence 999999998875 4433321 234445443 46777777899999983 23698875443
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 009673 459 RGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 459 ~g~~~~d~~~la~~i~~~~ 477 (529)
+++++++++.|++++
T Consensus 386 ----~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 386 ----SSNVGYLAHAIHQVT 400 (401)
T ss_dssp ----TTTHHHHHHHHHHHH
T ss_pred ----hhhHHHHHHHHHHHh
Confidence 577999999998765
No 161
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.88 E-value=8.6e-22 Score=207.64 Aligned_cols=286 Identities=17% Similarity=0.158 Sum_probs=187.8
Q ss_pred cCChHHHHHHHHHHHHhhcceeEecCCCCCcHHHHHHHhhhhhcc-CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC
Q 009673 85 EADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL 163 (529)
Q Consensus 85 ~~d~~~~~~~~~e~~~~~~~i~L~asen~~~~~V~eal~~~l~~~-y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~ 163 (529)
+...++.+.++++..++...++.++.+| .+.|++++....... ...+..+ |..+....+++ ++++++++|.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n--~~~vl~A~~~~~~~~~~~~~~~g--~~y~~~~~~~l----~~~la~~~g~ 80 (431)
T 3ht4_A 9 EKIAPIVKEVESQITEVHKRADEVIESN--QFRVLESFGKHKISDSHFIPTTG--YGYDDIGRDTL----EKVYADVFGA 80 (431)
T ss_dssp TTSHHHHHHHHHHTHHHHHHHHHHHHHH--HHHHHHHHHHTTCCGGGSCCCCT--TCCSCHHHHHH----HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhchhhhhcCCCCC--CCCChhhHHHH----HHHHHHHhCC
Confidence 3445555555566666667777777666 468888887643211 1111111 11122333344 4789999999
Q ss_pred CCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcC-CCCCccccccccc--cccccccccceEEEEEcccCCCCCCCCH
Q 009673 164 DENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLSHGFMT--PKRRVSGTSIYFESMPYRLDESTGLVDY 240 (529)
Q Consensus 164 ~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~-~~~~g~~s~g~~~--~~~~i~~~g~~~~~v~~~v~~~~~~iD~ 240 (529)
+.+. ++++++||++|+..++.++++|||+|++++ +.|+++....... +.......|. +++.+++++ ++.+|+
T Consensus 81 ~~~~--~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~--~~~~v~~~~-~~~~d~ 155 (431)
T 3ht4_A 81 EAGL--VRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNI--GYNAVPLTE-GGLVDF 155 (431)
T ss_dssp SEEC--CBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTC--EEEECCBCT-TSSBCH
T ss_pred Cccc--ccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCC--EEEEeCCCC-CCCcCH
Confidence 8642 245568999999999999999999999998 7776543210000 0011222344 777777763 588999
Q ss_pred HHHHHHhhhcCCcEEEEc-CCCCCC-----CCCHHHHHHHHHH--hCCEEEEecccccccccccccCCCCC-cccEEEec
Q 009673 241 DMLEKTAILFRPKLIIAG-ASAYPR-----DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-YCDVVTTT 311 (529)
Q Consensus 241 d~le~~i~~~~pklIi~~-~s~~p~-----~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S 311 (529)
++|++++++ ++++|+++ +++||+ ..|+++|+++|++ +|+++++|++|..+... ..++. ++|++++|
T Consensus 156 e~l~~~l~~-~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~----~~~~~~g~Di~~~S 230 (431)
T 3ht4_A 156 EAVAAAIHS-NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEE----QEPCHVGADLMAGS 230 (431)
T ss_dssp HHHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSS----CCGGGTTCSEEEEE
T ss_pred HHHHhhcCC-CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccC----CCccccCCeEEEcC
Confidence 999999987 89999988 466665 4478999999999 99999999997655421 12232 68999999
Q ss_pred ccccccC---CCCeEEEeeCCCcchhHHHhhhcccc-cCCC--CCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 009673 312 THKSLRG---PRGGMIFFKKDPVLGVELESAINNAV-FPGL--QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (529)
Q Consensus 312 ~hK~l~G---prgG~i~~~~~~~~~~~l~~~i~~~~-~p~~--~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~ 385 (529)
+||++.| +.||++++++ ++.+++.... .++. ..++.......+..+++. ...+.++..+++++
T Consensus 231 ~sK~lgg~~~~~GG~v~~~~------~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~a~~ 299 (431)
T 3ht4_A 231 LIKNPGGGIVKTGGYIVGKE------QYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFL-----APHVAGQALKGAIF 299 (431)
T ss_dssp TTSGGGTTTCSSCEEEEECH------HHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHH-----HHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCceEEEEecH------HHHHHHHHHhccCCcccccCccHHHHHHHHhHhhh-----HHHHHHHHHHHHHH
Confidence 9999866 7889999987 6776664422 1221 112211111111123332 24667888999999
Q ss_pred HHHHHHhcCcEEec
Q 009673 386 LASRLVELGYKLVS 399 (529)
Q Consensus 386 l~~~L~~~G~~v~~ 399 (529)
+++.|++.|+++.+
T Consensus 300 l~~~L~~~g~~v~p 313 (431)
T 3ht4_A 300 TAAFLEKLGMNTSP 313 (431)
T ss_dssp HHHHHHHHTCCEES
T ss_pred HHHHHHhCcCEecC
Confidence 99999999988754
No 162
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.88 E-value=1.5e-21 Score=208.97 Aligned_cols=331 Identities=12% Similarity=0.014 Sum_probs=210.1
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCC------ceeeecCChHHHHHHHHHhh
Q 009673 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKW------GVNVQPLSGSPANFEVYTAI 188 (529)
Q Consensus 115 ~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~------~~~V~~~sGs~A~~~~l~al 188 (529)
+..+.+++...++ .+..+ |...+...++|+.+++++++++|++.+.. ...+.+++||+||+.++.++
T Consensus 87 ~~~~~~~~~~~~n-~~~~~------~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~ 159 (486)
T 1js3_A 87 PAMLADMLCGAIG-CIGFS------WAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAA 159 (486)
T ss_dssp HHHHHHHHHHHHC-CCCSS------GGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-cCccc------cccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHH
Confidence 4456777776653 22211 33345578899999999999999985311 11345567779999888776
Q ss_pred cCC---------CC--------E--EEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh
Q 009673 189 LKP---------HD--------R--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL 249 (529)
Q Consensus 189 l~p---------GD--------~--Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~ 249 (529)
.++ || + |+++++.|.+.. +.+...|. +++.++++ +++.+|+++|++++++
T Consensus 160 ~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~--------~~~~~~G~--~v~~v~~d-~~~~~d~~~L~~~i~~ 228 (486)
T 1js3_A 160 RTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVE--------RAGLIGGV--KLKAIPSD-GKFAMRASALQEALER 228 (486)
T ss_dssp HHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHH--------HHHHHHTC--EEEEECCC-TTSCCCHHHHHHHHHH
T ss_pred HHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHH--------HHHHhCCC--ceEEeecC-CCCCCCHHHHHHHHHH
Confidence 421 43 3 677777664321 23445565 56677776 5789999999999976
Q ss_pred cCC------cEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC---CCCCcccEEEecccccccC
Q 009673 250 FRP------KLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRG 318 (529)
Q Consensus 250 ~~p------klIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~---~~~~~aDiv~~S~hK~l~G 318 (529)
++ .+|+++.++|++ ..|+++|.++|++||+|+++|+||..+....+... ..+.++|++++++||++.+
T Consensus 229 -~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~ 307 (486)
T 1js3_A 229 -DKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLV 307 (486)
T ss_dssp -HHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSC
T ss_pred -HHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCC
Confidence 33 377777665554 78999999999999999999999876654322111 1123689999999999876
Q ss_pred CCC-eEEEeeCCCcchhHH-Hhhhccc---ccC--------------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHH
Q 009673 319 PRG-GMIFFKKDPVLGVEL-ESAINNA---VFP--------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV 379 (529)
Q Consensus 319 prg-G~i~~~~~~~~~~~l-~~~i~~~---~~p--------------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i 379 (529)
|.+ |+++++++ .+ .+.+... ... ..+++... ...++..+++.+...++.++.++.
T Consensus 308 p~~~G~l~~~~~-----~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~-~~~~~~~al~~~g~~g~~~~~~~~ 381 (486)
T 1js3_A 308 NFDCSAMWVKRR-----TDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRF-RSLKMWFVFRMYGVKGLQAYIRKH 381 (486)
T ss_dssp CSSCEEEEESCH-----HHHHGGGC------------CCSCCCGGGSSSCSCCCC-THHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEeCH-----HHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCch-hHHHHHHHHHHHhHHHHHHHHHHH
Confidence 655 99999873 32 3333110 000 00111111 123444555544445678889999
Q ss_pred HHHHHHHHHHHHhc-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCcc
Q 009673 380 VSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTT 458 (529)
Q Consensus 380 ~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt 458 (529)
.++++++.+.|.+. |++++.+. ..+++.+.+.+......++.+.|.+.|+.+.. |+. ....+.+|+++...
T Consensus 382 ~~~a~~l~~~L~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~---~~~--~~~~~~lRi~~~~~-- 453 (486)
T 1js3_A 382 VQLSHEFEAFVLQDPRFEVCAEV-TLGLVCFRLKGSDGLNEALLERINSARKIHLV---PCR--LRGQFVLRFAICSR-- 453 (486)
T ss_dssp HHHHHHHHHHHHHCTTEEECSCC-CSSEEEEEESSCHHHHHHHHHHHHHHTSCBCE---EEE--ETTEEEEEEECCCT--
T ss_pred HHHHHHHHHHHhcCCCeEEeCCC-ceeEEEEEecChHHHHHHHHHHHHhcCCEEEE---EEE--ECCEEEEEEEeCCC--
Confidence 99999999999984 89987532 23344444432110135677777777764311 111 01246899996322
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 009673 459 RGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 459 ~g~~~~d~~~la~~i~~~~~~ 479 (529)
..+++|++++++.|++++..
T Consensus 454 -~~t~~di~~~~~~l~~~~~~ 473 (486)
T 1js3_A 454 -KVESGHVRLAWEHIRGLAAE 473 (486)
T ss_dssp -TCCHHHHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHHHHH
Confidence 13589999999999888754
No 163
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.88 E-value=2.5e-21 Score=208.96 Aligned_cols=308 Identities=13% Similarity=0.045 Sum_probs=195.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc-------C-CCC------EEEEcCCCCCcccccc
Q 009673 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-------K-PHD------RIMGLDLPHGGHLSHG 209 (529)
Q Consensus 144 ~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all-------~-pGD------~Vl~~~~~~~g~~s~g 209 (529)
+...++|..+++++++++|++.+. .+..++||+||..++.++. + +|| +|++.+..|.+..
T Consensus 144 ~~~~~le~~~~~~la~l~g~~~~~---~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~--- 217 (515)
T 2jis_A 144 PVFVLMEEEVLRKLRALVGWSSGD---GIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQ--- 217 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSCE---EEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH---
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCC---eEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHH---
Confidence 456788888999999999998432 2444566799998888763 2 686 7888877665432
Q ss_pred ccccccccccccceE-EEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCE
Q 009673 210 FMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAYPR--DFDYPRMRQIADAVGAL 281 (529)
Q Consensus 210 ~~~~~~~i~~~g~~~-~~v~~~v~~~~~~iD~d~le~~i~~~-----~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~ 281 (529)
+.+...|.+. +++.++++ +++.+|+++|++++++. +|++|+++.++|++ ..|+++|+++|+++|+|
T Consensus 218 -----~~~~~~g~g~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~ 291 (515)
T 2jis_A 218 -----KGAAFLGLGTDSVRVVKAD-ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLW 291 (515)
T ss_dssp -----HHHHHTTSCGGGEEEECBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCE
T ss_pred -----HHHHHcCCCCCcEEEEecC-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCe
Confidence 1223334322 45556665 46899999999999763 48888888665554 78999999999999999
Q ss_pred EEEecccccccccccccCCCC---CcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhc----ccccC-------
Q 009673 282 LMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN----NAVFP------- 346 (529)
Q Consensus 282 livD~ah~~Gli~~~~~~~~~---~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~----~~~~p------- 346 (529)
+++|++|+.+....+.....+ .++|++++|+|||+.+|.+ |+++++++. ++.++.. ...+.
T Consensus 292 l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~----~~~~~~~~~~~~yl~~~~~~~~~ 367 (515)
T 2jis_A 292 LHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTS----NLLKRCHGSQASYLFQQDKFYDV 367 (515)
T ss_dssp EEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCS----CHHHHHHCC---------CCSCG
T ss_pred EEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChH----HHHHHHhcCCchhccCCcccccc
Confidence 999999877765433221112 3689999999999988876 999998730 1322210 00000
Q ss_pred -------CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEecCCCCCceEEEccCCC---C
Q 009673 347 -------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRPM---G 415 (529)
Q Consensus 347 -------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~~~gt~~~~~~v~~~~~---~ 415 (529)
.++.+..... .+++.+++.+...+++++.++..++++++.+.|++ .|++++.+...+. +.+...+. +
T Consensus 368 ~~~~~~~~~~~~rr~~a-l~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~-v~f~~~p~~~~~ 445 (515)
T 2jis_A 368 ALDTGDKVVQCGRRVDC-LKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVN-VCFWFVPPSLRG 445 (515)
T ss_dssp GGCCGGGCSCSSCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSE-EEEEECCGGGTT
T ss_pred cCCCCCCCCCCCCcccH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeE-EEEEEeCccccc
Confidence 0011110001 12222333333456788889999999999999998 4899886432222 22222111 1
Q ss_pred C----c-HH-------HHHHhHhcCCeEE-cCCCCCCCCCCCCCCeEEEcc-CCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 416 I----D-GA-------RVEKILDMASITL-NKNSVPGDKSALVPGGIRIGS-PAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 416 i----~-~~-------~~~~~L~~~GI~v-~~~~~Pg~~~~~~~~~iRig~-~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
. + .. .+.+.|.+.|+.+ .....++ ..+.+|+++ +..+ +++|++++++.|++++.
T Consensus 446 ~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~-----~~~~lRis~~~~~~----t~edid~~~~~l~~~~~ 513 (515)
T 2jis_A 446 KQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGT-----RGNFFRVVVANSAL----TCADMDFLLNELERLGQ 513 (515)
T ss_dssp CTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETT-----EEEEEEEECCCTTC----CHHHHHHHHHHHHHHHT
T ss_pred cccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECC-----ceEEEEEEeCCCCC----CHHHHHHHHHHHHHHHh
Confidence 0 1 01 2455666678654 2110111 235799998 5554 48999999999987653
No 164
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.88 E-value=2.4e-21 Score=201.93 Aligned_cols=329 Identities=14% Similarity=0.137 Sum_probs=198.3
Q ss_pred cceeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH--cC-CCCCCCceeeecCCh
Q 009673 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA--FN-LDENKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~asen--~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~--~g-~~~~~~~~~V~~~sG 177 (529)
+.|+|..+++ ++++.|++++...+...... .+...|+......+++ +.++++ +| ++++ +|.+++|
T Consensus 34 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~y~~~~g~~~lr----~~la~~l~~g~~~~~----~v~~~~G 103 (400)
T 3asa_A 34 TVINLSIGDTTQPLNASVAEAFASSIARLSSP--TTCRGYGPDFGLPALR----QKLSEDFYRGFVDAK----EIFISDG 103 (400)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHHHHHTSS--SCCCCCCCTTCCHHHH----HHHHHTTSTTSSCGG----GEEEESC
T ss_pred ceEeccCCCCCCCCCHHHHHHHHHHHhccccc--ccccCCCCCCCCHHHH----HHHHHHHHcCCCCHH----HEEEccC
Confidence 5688877765 36889999998776432100 0000121111223444 455666 57 5543 4555777
Q ss_pred H-HHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEE
Q 009673 178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLI 255 (529)
Q Consensus 178 s-~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pklI 255 (529)
+ +++..+ ..+++|||+|++.+|.|.++.. .+...|.. .++.++++++ ....|+++ + .++++|
T Consensus 104 ~~~al~~~-~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~-~~~~~~~~~~~~~~~~l~~----~--~~~~~v 167 (400)
T 3asa_A 104 AKVDLFRL-LSFFGPNQTVAIQDPSYPAYLD--------IARLTGAK-EIIALPCLQENAFFPEFPE----D--THIDIL 167 (400)
T ss_dssp HHHHHHHH-HHHHCSSCEEEEEESCCHHHHH--------HHHHTTCS-EEEEEECCGGGTTCCCCCT----T--CCCSEE
T ss_pred hHHHHHHH-HHHcCCCCEEEECCCCcHHHHH--------HHHHcCCc-ceEecccchhcCcccChhh----c--cCccEE
Confidence 6 777764 4567899999999988765421 22334542 1455555432 23444322 1 378999
Q ss_pred EEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccccccccccccCCCC---C---cccEEEecccccc--cCCCCe
Q 009673 256 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K---YCDVVTTTTHKSL--RGPRGG 322 (529)
Q Consensus 256 i~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~---~aDiv~~S~hK~l--~GprgG 322 (529)
+++.++||+ ..+ +++|.++|+++|+++|+|++|. ++...+..+.++ + ..+++++|+||++ +|+|.|
T Consensus 168 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG 246 (400)
T 3asa_A 168 CLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYS-TFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLG 246 (400)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTG-GGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCE
T ss_pred EEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhh-hhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchhee
Confidence 998888886 444 6678899999999999999965 333222111111 1 1248899999997 678889
Q ss_pred EEEeeCCCcchhHH-------HhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCc
Q 009673 323 MIFFKKDPVLGVEL-------ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY 395 (529)
Q Consensus 323 ~i~~~~~~~~~~~l-------~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~ 395 (529)
+++++++ + .+.+.........++++....+++..+++.. +.++..+++.++++.+.+.|++.|+
T Consensus 247 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~l~~~L~~~g~ 317 (400)
T 3asa_A 247 WTVIPQE------LTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL---PQLEAIHYYRENSDLLRKALLATGF 317 (400)
T ss_dssp EEECCTT------CBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEeeChh------hccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 9999874 3 2222111000011223344444444566643 3456778888999999999998898
Q ss_pred EEecCCCCCceEEEc-cCCCCCcHHHHHH-hHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673 396 KLVSGGSDNHLVLVD-LRPMGIDGARVEK-ILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473 (529)
Q Consensus 396 ~v~~~gt~~~~~~v~-~~~~~i~~~~~~~-~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i 473 (529)
++..+ ..++++|++ +. .+++..++.+ +++++||.+..+...+ +..++++||++ . .+++++++.++.|
T Consensus 318 ~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gv~v~~g~~f~---~~~~~~iRis~--~----~~~e~i~~~l~~l 386 (400)
T 3asa_A 318 EVFGG-EHAPYLWVKPTQ-ANISDRDLFDFFLREYHIAITPGIGFG---RSGSGFVRFSS--L----GKREDILAACERL 386 (400)
T ss_dssp EEEEC-SSSSEEEEECCC-TTCCTTTHHHHHHHHHSEECEEGGGGC---GGGTTCEEEEC--C----SCHHHHHHHHHHH
T ss_pred eeeCC-CCceEEEEeccC-CCCCHHHHHHHHHHhCCEEEeChhHhC---CCCCCEEEEEe--e----CCHHHHHHHHHHH
Confidence 87754 234567777 53 3445544544 4567799986532111 11356899983 2 3589999999999
Q ss_pred HHHHH
Q 009673 474 HEGVE 478 (529)
Q Consensus 474 ~~~~~ 478 (529)
++++.
T Consensus 387 ~~~~~ 391 (400)
T 3asa_A 387 QMAPA 391 (400)
T ss_dssp HC---
T ss_pred HHHHH
Confidence 88775
No 165
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.88 E-value=1.1e-21 Score=204.47 Aligned_cols=324 Identities=12% Similarity=0.040 Sum_probs=208.5
Q ss_pred cceeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeee--cCChHHH
Q 009673 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ--PLSGSPA 180 (529)
Q Consensus 103 ~~i~L~asen~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~--~~sGs~A 180 (529)
..+++.+++..+|+.|++++..... .. .++ ..+ +..+ .++.+.+++++++++|++..+ +|. .++|++|
T Consensus 40 ~~~~~~~~~~~~~~~v~~a~~~~~~-~~-~~~--~~~--~~~~-~~~~~~~~~~la~~~g~~~~~---~i~~~t~g~t~a 109 (398)
T 2fyf_A 40 RDGRFGSGPSKVRLEQLQTLTTTAA-AL-FGT--SHR--QAPV-KNLVGRVRSGLAELFSLPDGY---EVILGNGGATAF 109 (398)
T ss_dssp SSCBCCSSSCCCCHHHHHGGGTTTT-TT-TTS--CTT--SHHH-HHHHHHHHHHHHHHTTCCTTC---EEEEEETCHHHH
T ss_pred CCccccCCCCCCCHHHHHHHhhcCC-Cc-cCc--CcC--CHHH-HHHHHHHHHHHHHHhCCCCCc---eEEEeCCchhHH
Confidence 4577888888899999999976310 10 010 011 1222 233345679999999997421 333 4556699
Q ss_pred HHHHHHhhcCCC-CEEEEcCCCCCccccccccccccccccc--cceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 009673 181 NFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGT--SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 257 (529)
Q Consensus 181 ~~~~l~all~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~--g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~ 257 (529)
+..++.++++|| |.| ....|+. ... ...... |. +++.++++ ++..+|. .+++ +|++|++
T Consensus 110 l~~~~~~l~~~gv~~v--~~~~~~~----~~~---~~~~~~~~g~--~~~~v~~~-~g~~~~~-----~i~~-~~~~v~~ 171 (398)
T 2fyf_A 110 WDAAAFGLIDKRSLHL--TYGEFSA----KFA---SAVSKNPFVG--EPIIITSD-PGSAPEP-----QTDP-SVDVIAW 171 (398)
T ss_dssp HHHHHHHTCSSCEEEE--ECSHHHH----HHH---HHHHHCTTSC--CCEEEECC-TTCCCCC-----CCCT-TCSEEEE
T ss_pred HHHHHHHhcCCCeEEE--eCCHHHH----HHH---HHHHHhCCCC--ceEEEecC-CCCCCCc-----cccC-CCCEEEE
Confidence 999999999998 444 2222210 000 001112 33 33444454 3333332 1444 7999998
Q ss_pred cCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCCcccEEEecccccccCCCC-eEEEeeCCCcchh
Q 009673 258 GASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGV 334 (529)
Q Consensus 258 ~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~ 334 (529)
++++||+ ..|+++|.++ +|++|++|++|..|.... .+..+|++++|+||+++++.| |++++++
T Consensus 172 ~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~-----~~~~~di~~~s~sK~~~~~gg~g~l~~~~------ 237 (398)
T 2fyf_A 172 AHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPV-----DIAETDAYYFAPQKNFASDGGLWLAIMSP------ 237 (398)
T ss_dssp ESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCC-----CGGGCSEEEECTTSTTCSCSSEEEEEECH------
T ss_pred eCcCCCcceecchHHhhhh---cCCeEEEEeccccCCccc-----CcccCcEEEEecCcccCCCCceEEEEECH------
Confidence 8777776 6788887777 899999999987664321 222479999999999866633 8888887
Q ss_pred HHHhhhccc----------c----------cCCCCCCChHHHHHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHHHhc
Q 009673 335 ELESAINNA----------V----------FPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVEL 393 (529)
Q Consensus 335 ~l~~~i~~~----------~----------~p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~~a~~l~~~L~~~ 393 (529)
++.++++.. . .....++++...++++..+++.+...+ +++..+++.++++++.+.|++.
T Consensus 238 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~ 317 (398)
T 2fyf_A 238 AALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQER 317 (398)
T ss_dssp HHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHc
Confidence 555544210 0 012235677777777777887654444 6788899999999999999986
Q ss_pred -CcEEec--C-CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHH
Q 009673 394 -GYKLVS--G-GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 469 (529)
Q Consensus 394 -G~~v~~--~-gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~l 469 (529)
|+++.. + +..++++++.+. .+++..++.+.|.+.||.+..+ .. ....+.|||++...+ +++|++++
T Consensus 318 ~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~gI~v~~g----~~-~~~~~~iRis~~~~~----t~e~i~~~ 387 (398)
T 2fyf_A 318 PYTTPFVTDPGLRSQVVGTIDFV-DDVDAGTVAKILRANGIVDTEP----YR-KLGRNQLRVAMFPAV----EPDDVSAL 387 (398)
T ss_dssp TTEEESCCSGGGBCSSEEEEEEC-TTSCHHHHHHHHHHTTCBCCSC----CT-TTCSSEEEEECCTTS----CHHHHHHH
T ss_pred CCceeccCChhhcCCcEEEEECC-CCCCHHHHHHHHHHCCcEEecC----cc-cCCCCEEEEEecCCC----CHHHHHHH
Confidence 888874 2 112336677664 3567788888888889998542 11 123578999986543 58999999
Q ss_pred HHHHHHHHH
Q 009673 470 ADFIHEGVE 478 (529)
Q Consensus 470 a~~i~~~~~ 478 (529)
++.|++++.
T Consensus 388 ~~~l~~~l~ 396 (398)
T 2fyf_A 388 TECVDWVVE 396 (398)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988764
No 166
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.87 E-value=8.8e-21 Score=196.78 Aligned_cols=312 Identities=12% Similarity=0.063 Sum_probs=199.9
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCC--
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP-- 191 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~p-- 191 (529)
.+|.|.+++...+.. +..++ +.+ ..+...+++ +++++++|.+. .+..++|++|+..++.++..+
T Consensus 53 ~~p~v~~a~~~~~~~-~~~~~---~~~-~~~~~~~l~----~~la~~~g~~~-----v~~~~~gt~a~~~al~~~~~~~~ 118 (392)
T 3ruy_A 53 RHPKIINALIDQANR-VTLTS---RAF-HSDQLGPWY----EKVAKLTNKEM-----VLPMNTGAEAVETAIKTARRWAY 118 (392)
T ss_dssp TCHHHHHHHHHHHTT-CSCCC---TTS-EETTHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccccc---ccc-CCHHHHHHH----HHHHHhcCCCE-----EEEeCcHHHHHHHHHHHHHHhhh
Confidence 579999999877643 22211 111 233444444 77888888432 345577889999998877644
Q ss_pred --------CCEEEEcCCCCCcccccccccccccccccc---ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 009673 192 --------HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS---IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (529)
Q Consensus 192 --------GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g---~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s 260 (529)
||+|++.++.|.+................+ ....+..++ ..|+++|++++++ ++++|+++++
T Consensus 119 ~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~~~v~~~~~ 191 (392)
T 3ruy_A 119 DVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIP------YGDLEALKAAITP-NTAAFILEPI 191 (392)
T ss_dssp HTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEEC------TTCHHHHHHHCCT-TEEEEEECSS
T ss_pred hccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeC------cccHHHHHHHhcc-CeEEEEEeCc
Confidence 789999998875442111000000000000 000122222 2389999999986 8999999888
Q ss_pred CCCC--CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CCC-CC-cccEEEecccccccC--CCCeEEEeeCC
Q 009673 261 AYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADP-FK-YCDVVTTTTHKSLRG--PRGGMIFFKKD 329 (529)
Q Consensus 261 ~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~-~~-~aDiv~~S~hK~l~G--prgG~i~~~~~ 329 (529)
+||+ ..+ +++|.++|++||++||+|++|. |+...+.. ... .. ..|++++ +|+++| .|+|++++++
T Consensus 192 ~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~~~--SK~l~gG~~~~G~~~~~~- 267 (392)
T 3ruy_A 192 QGEAGINIPPAGFLKEALEVCKKENVLFVADEIQT-GLGRTGKVFACDWDNVTPDMYIL--GKALGGGVFPISCAAANR- 267 (392)
T ss_dssp BSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEE--CGGGGTTTSCCEEEEECH-
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechh-CCCccccchhhhccCCCCCEEEE--chhhhCChhhhEEEEECH-
Confidence 8875 566 9999999999999999999974 43322211 100 11 3577755 599977 7999999987
Q ss_pred CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCc---EEecCCCCCce
Q 009673 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY---KLVSGGSDNHL 406 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~---~v~~~gt~~~~ 406 (529)
++.+.+......+.++ ++...++++..+++.... ++..+++.++++++.+.|++.+. ....+ ...+
T Consensus 268 -----~~~~~~~~~~~~~~~~-~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~g~~ 336 (392)
T 3ruy_A 268 -----DILGVFEPGSHGSTFG-GNPLACAVSIAALEVLEE---EKLTERSLQLGEKLVGQLKEIDNPMITEVRG--KGLF 336 (392)
T ss_dssp -----HHHTTCCTTSSCCSST-TCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEE--ETTE
T ss_pred -----HHHhhhccCCcCCCCC-CCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHhcCCCceEEEe--eeeE
Confidence 6777776543333333 344455555556765432 45677888889999999987642 22222 2345
Q ss_pred EEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 407 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 407 ~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
+++.+.. +..++.+.|.++||.+. |+ .++.+||+.+.. .+++|++++++.|++++
T Consensus 337 ~~~~~~~---~~~~l~~~l~~~gi~v~----~~-----~~~~iRi~~~~~----~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 337 IGIELNE---PARPYCEQLKAAGLLCK----ET-----HENVIRIAPPLV----ISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp EEEEESS---CSHHHHHHHHTTTEECC----CB-----TTTEEEECCCTT----CCHHHHHHHHHHHHHHH
T ss_pred EEEEEcc---hHHHHHHHHHHCCcEEe----cC-----CCCEEEEECCCC----CCHHHHHHHHHHHHHHh
Confidence 5565643 56778888889999984 33 257899997654 45899999999998875
No 167
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.87 E-value=1.3e-21 Score=204.64 Aligned_cols=327 Identities=15% Similarity=0.176 Sum_probs=201.7
Q ss_pred cceeEecCC----C---CCcHHHHHHHhh-hhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceee
Q 009673 103 KSLELIASE----N---FTSRAVMEAVGS-CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNV 172 (529)
Q Consensus 103 ~~i~L~ase----n---~~~~~V~eal~~-~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V 172 (529)
+.|+|..+. + ++++.|.+++.. .+......+|.. .....++++.+.+++...+|. +++++ +.+
T Consensus 30 ~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~~i-~~~ 102 (412)
T 1yaa_A 30 TKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLG------ITGLPSLTSNAAKIIFGTQSDALQEDRV-ISV 102 (412)
T ss_dssp SCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCC------TTCCHHHHHHHHHHHHCTTCHHHHTTCE-EEE
T ss_pred CeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCC------CCCcHHHHHHHHHHHhcCCCCCCCcceE-EEE
Confidence 467887654 2 467999999988 664222223321 112345554444555443442 34321 111
Q ss_pred ecCChHHHHHHH--HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc-CCCCCCCCHHHHHHHhhh
Q 009673 173 QPLSGSPANFEV--YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAIL 249 (529)
Q Consensus 173 ~~~sGs~A~~~~--l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v-~~~~~~iD~d~le~~i~~ 249 (529)
++.+|++|+..+ +..+++|||+|++++|.|.++.. .+...|. +++.+++ +++++.+|+++|++.+++
T Consensus 103 ~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~ 172 (412)
T 1yaa_A 103 QSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMA--------IFENQGL--KTATYPYWANETKSLDLNGFLNAIQK 172 (412)
T ss_dssp EEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHH--------HHHTTTC--CEEEEECEETTTTEECHHHHHHHHHH
T ss_pred eccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHH--------HHHHcCc--eEEEEeeecCCCCccCHHHHHHHHHh
Confidence 134455888877 34556899999999998765431 2334454 5555665 444678999999999976
Q ss_pred cC-Cc-EEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccc---cc-CC-CCC--c----ccEEEec
Q 009673 250 FR-PK-LIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS---VV-AD-PFK--Y----CDVVTTT 311 (529)
Q Consensus 250 ~~-pk-lIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~---~~-~~-~~~--~----aDiv~~S 311 (529)
.+ ++ ++++++++||+ .. ++++|.++|++||+++|+|++|. ++...+ .. +. .+. + .+++++|
T Consensus 173 ~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 251 (412)
T 1yaa_A 173 APEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQ-GFATGDLDKDAYAVRLGVEKLSTVSPVFVCQS 251 (412)
T ss_dssp SCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT-TTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEE
T ss_pred CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccc-cccCCcccchhHHHHHHHhcCCCCcceEEEec
Confidence 32 24 44448888886 33 46788999999999999999963 333221 00 00 111 2 3578899
Q ss_pred cccccc--CCCCeEEE--e-----eCCCcchhH----HHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-----CchHH
Q 009673 312 THKSLR--GPRGGMIF--F-----KKDPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-----SPEFK 373 (529)
Q Consensus 312 ~hK~l~--GprgG~i~--~-----~~~~~~~~~----l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-----~~~~~ 373 (529)
+||+++ |+|.||++ + ++ + +.+.+........ ++++....+++..+|+... ....+
T Consensus 252 ~sK~~~~~GlriG~~~~~~~~~~~~~------~~~~~l~~~l~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 324 (412)
T 1yaa_A 252 FAKNAGMYGERVGCFHLALTKQAQNK------TIKPAVTSQLAKIIRSEV-SNPPAYGAKIVAKLLETPELTEQWHKDMV 324 (412)
T ss_dssp CTTTSCCGGGCEEEEEEECCSCTTHH------HHHHHHHHHHHHHHHTTT-SSCCHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred cCCCCCCcCCcceEEEEEecCCCCCH------HHHHHHHHHHHHHHhhcc-CCCChHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999873 67779998 6 33 4 5555554222222 2323334444444554321 12356
Q ss_pred HHHHHHHHHHHHHHHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeE
Q 009673 374 VYQNKVVSNCRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGI 449 (529)
Q Consensus 374 ~~~~~i~~~a~~l~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~i 449 (529)
+..+++.++++.+.+.|++.+ +++..+. .+.+.|+++ +...+..+|+++||.+.. ++
T Consensus 325 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~l~~~gi~v~~-------------~~ 385 (412)
T 1yaa_A 325 TMSSRITKMRHALRDHLVKLGTPGNWDHIVNQ-CGMFSFTGL-----TPQMVKRLEETHAVYLVA-------------SG 385 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHC-CSSEEECCC-----CHHHHHHHHHHHCEECCT-------------TS
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCeeeeccC-ceEEEeeCC-----CHHHHHHHHHhCCEEecc-------------Cc
Confidence 777888889999999998865 6655432 234444433 456677778889999831 47
Q ss_pred EEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 450 RIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 450 Rig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
||++.. .+++|++++++.|+++++
T Consensus 386 Ris~~~-----~~~~~i~~~~~~l~~~~~ 409 (412)
T 1yaa_A 386 RASIAG-----LNQGNVEYVAKAIDEVVR 409 (412)
T ss_dssp EEEGGG-----CCTTTHHHHHHHHHHHHH
T ss_pred EEEEcc-----CCHhHHHHHHHHHHHHHH
Confidence 998753 347999999999988765
No 168
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.87 E-value=2.9e-20 Score=191.44 Aligned_cols=310 Identities=15% Similarity=0.126 Sum_probs=194.0
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHh---hc-
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA---IL- 189 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~a---ll- 189 (529)
.++.+++++...+... +.+..+| . .+...++ ++++++++|++ ++ .+..++|++|+..++.+ +.
T Consensus 45 ~~~~v~~a~~~~~~~~---~~~~~~y-~-~~~~~~l----~~~la~~~g~~-~~---v~~~~g~t~a~~~~~~~~~~~~~ 111 (375)
T 2eh6_A 45 AYPKLTEALKEQVEKL---LHVSNLY-E-NPWQEEL----AHKLVKHFWTE-GK---VFFANSGTESVEAAIKLARKYWR 111 (375)
T ss_dssp SCHHHHHHHHHHHHHC---SCCCTTB-C-CHHHHHH----HHHHHHTSSSC-EE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc---cccCccc-C-CHHHHHH----HHHHHhhcCCC-Ce---EEEeCchHHHHHHHHHHHHHHhc
Confidence 6899999998877532 1222222 2 2333344 37788889983 31 23345566999988865 45
Q ss_pred --CCC-CEEEEcCCCCCccccccccccccccccccce---EEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 009673 190 --KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY---FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (529)
Q Consensus 190 --~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~---~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p 263 (529)
+|| |+|+++++.|.+............+...+.. -....++ .+|+++|++.+++ ++++|++++++||
T Consensus 112 ~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~~~v~~~~~~~~ 184 (375)
T 2eh6_A 112 DKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAK------LNDIDSVYKLLDE-ETAGIIIEVIQGE 184 (375)
T ss_dssp HTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEEC------TTCHHHHHTTCCT-TEEEEEECSEETT
T ss_pred cCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCC------CchHHHHHHHhcC-CeEEEEEeCccCC
Confidence 889 9999999886543211000000000000100 0011111 2589999999986 8999999887777
Q ss_pred C--CCC----HHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEeccccccc-CCCCeEEEeeCCCcch
Q 009673 264 R--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLG 333 (529)
Q Consensus 264 ~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l~-GprgG~i~~~~~~~~~ 333 (529)
+ ..+ +++|.++|++||+++|+|++|. ++...+... ..+. ..|++++| |++. |+|.|++++++
T Consensus 185 tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~d~~s~S--K~~~~g~~~G~~~~~~----- 256 (375)
T 2eh6_A 185 GGVNEASEDFLSKLQEICKEKDVLLIIDEVQT-GIGRTGEFYAYQHFNLKPDVIALA--KGLGGGVPIGAILARE----- 256 (375)
T ss_dssp TTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSCCEEEEEEH-----
T ss_pred CCCcCCCHHHHHHHHHHHHHhCCEEEEecccc-CCCCCCcchhhhhcCCCCCEEEEc--ccccCCCCeEEEEEcH-----
Confidence 4 446 9999999999999999999976 332222100 0111 37888555 9884 45669999987
Q ss_pred hHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCC
Q 009673 334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (529)
Q Consensus 334 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~ 413 (529)
++.+.+.........+++.....++ ..+|+... ++.+++.++++++.+.|++.+.....+ ...++++++..
T Consensus 257 -~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~-----~~~~~~~~~~~~l~~~L~~~~~~~~~~--~g~~~~~~~~~ 327 (375)
T 2eh6_A 257 -EVAQSFTPGSHGSTFGGNPLACRAG-TVVVDEVE-----KLLPHVREVGNYFKEKLKELGKGKVKG--RGLMLGLELER 327 (375)
T ss_dssp -HHHTTCCTTSCCCSSTTCHHHHHHH-HHHHHHHH-----HHHHHHHHHHHHHHHHHHHTTSSEEEE--ETTEEEEECSS
T ss_pred -HHHhhhcCCCCCCCCCCCHHHHHHH-HHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCceE--EEEEEEEEEcC
Confidence 6777665532223344444444333 33565432 567788888999999998866433332 24567777753
Q ss_pred CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 414 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 414 ~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
+..++.+.|.++||.+.. + .++++||+++.. .+++|++++++.|+++
T Consensus 328 ---~~~~~~~~l~~~gi~~~~----~-----~~~~iRi~~~~~----~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 328 ---ECKDYVLKALEKGLLINC----T-----AGKVLRFLPPLI----IQKEHIDRAISVLREI 374 (375)
T ss_dssp ---CCHHHHHHHHHTTEECEE----E-----TTTEEEECCCTT----CCHHHHHHHHHHHHHH
T ss_pred ---cHHHHHHHHHHCCCEEec----C-----CCCEEEEECCCC----CCHHHHHHHHHHHHHh
Confidence 346677777789999853 2 257899997643 4589999999999765
No 169
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.87 E-value=1.9e-21 Score=201.90 Aligned_cols=327 Identities=15% Similarity=0.147 Sum_probs=198.2
Q ss_pred cceeEecCC---C--C--CcHHHHHHHhh-hhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceee
Q 009673 103 KSLELIASE---N--F--TSRAVMEAVGS-CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNV 172 (529)
Q Consensus 103 ~~i~L~ase---n--~--~~~~V~eal~~-~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V 172 (529)
+.|+|..+. + . +++.|++++.. .+.+....+|+. ..| ..++++...+++....+. +++. ++|
T Consensus 27 ~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~---~~g---~~~lr~~la~~~~~~~~~~~~~~~--~~i 98 (397)
T 3fsl_A 27 DKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLP---MEG---LNCYRHAIAPLLFGADHPVLKQQR--VAT 98 (397)
T ss_dssp CCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCC---TTC---CHHHHHHHHHHHHCTTCHHHHTTC--EEE
T ss_pred CeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCC---CCc---hHHHHHHHHHHHhcCCcccccccc--eEE
Confidence 568887772 2 2 34899999988 765432334432 112 234443333444332221 2321 134
Q ss_pred ecCChH-HHHHHH--HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-CCCCCCCHHHHHHHhh
Q 009673 173 QPLSGS-PANFEV--YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAI 248 (529)
Q Consensus 173 ~~~sGs-~A~~~~--l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~-~~~~~iD~d~le~~i~ 248 (529)
.+++|+ +|+..+ +.++++|||+|++.+|.|.++.. .+...|. +++.++++ ++++.+|++++++.++
T Consensus 99 ~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~ 168 (397)
T 3fsl_A 99 IQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVA--------IFAGAGF--EVSTYPWYDEATNGVRFNDLLATLK 168 (397)
T ss_dssp EEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHH--------HHHHTTC--CEEEECCEETTTTEECHHHHHHHHT
T ss_pred EEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHH--------HHHHcCC--ceEEEeeeeccCCcCcHHHHHHHHH
Confidence 556665 898888 45678999999999988765421 2334554 55566552 2468899999999998
Q ss_pred hc--CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccc-ccCCCC------CcccEEEecccc
Q 009673 249 LF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS-VVADPF------KYCDVVTTTTHK 314 (529)
Q Consensus 249 ~~--~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~-~~~~~~------~~aDiv~~S~hK 314 (529)
+. +++++++++++||+ .. ++++|.++|++||+++|+|++|. ++...+ ....++ ....+++.|+||
T Consensus 169 ~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 247 (397)
T 3fsl_A 169 TLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQ-GFGAGMEEDAYAIRAIASAGLPALVSNSFSK 247 (397)
T ss_dssp TCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT-TSSSCTTGGGHHHHHHHHTTCCEEEEEECTT
T ss_pred hCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCch-hhccCcccccHHHHHHHhcCCCEEEEecccc
Confidence 42 56788888888887 33 46689999999999999999964 333221 000011 123488899999
Q ss_pred cc--cCCCCeEEEeeCCCcchhHHHhhh----cccccCCCCCCChHHHHHHHHHHHHHh-----cCchHHHHHHHHHHHH
Q 009673 315 SL--RGPRGGMIFFKKDPVLGVELESAI----NNAVFPGLQGGPHNHTIGGLAVCLKHA-----QSPEFKVYQNKVVSNC 383 (529)
Q Consensus 315 ~l--~GprgG~i~~~~~~~~~~~l~~~i----~~~~~p~~~g~p~~~~iaala~al~~~-----~~~~~~~~~~~i~~~a 383 (529)
++ +|+|.||+++.... .++.+++ .........+.+...+ ++++.++... .....++..+++.+++
T Consensus 248 ~~~~~G~riG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 323 (397)
T 3fsl_A 248 IFSLYGERVGGLSVMCED---AEAAGRVLGQLKATVRRNYSSPPNFGA-QVVAAVLNDEALKASWLKEVEEMRTRILAMR 323 (397)
T ss_dssp TTTCGGGCCEEEEEECSS---HHHHHHHHHHHHHHHHTTTSSCCSHHH-HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCcCCCeeEEEEecCC---HHHHHHHHHHHHHHHHhccCCCCHHHH-HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 87 58888999863210 0333222 1111112222222222 2222223210 0123467778889999
Q ss_pred HHHHHHHHhc----CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccC
Q 009673 384 RALASRLVEL----GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTR 459 (529)
Q Consensus 384 ~~l~~~L~~~----G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~ 459 (529)
+.+.+.|++. |+.+..+. .+.+.|+++ +.+.+.++|+++||.+. || + ||++..
T Consensus 324 ~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~l~~~gi~v~----~g--------~-Ris~~~---- 380 (397)
T 3fsl_A 324 QELVKVLSTEMPERNFDYLLNQ-RGMFSYTGL-----SAAQVDRLREEFGVYLI----AS--------G-RMCVAG---- 380 (397)
T ss_dssp HHHHHHHHHHCTTSCCTHHHHC-CSSEEECCC-----CHHHHHHHHHTTCEECC----TT--------C-EEEGGG----
T ss_pred HHHHHHHHhcCCCCCceeecCC-ceEEEecCC-----CHHHHHHHHHhCCEEEC----CC--------C-eEEEEe----
Confidence 9999999885 66655432 234455444 45678888999999983 32 1 888643
Q ss_pred CCCHHHHHHHHHHHHHH
Q 009673 460 GFSEKEFVAIADFIHEG 476 (529)
Q Consensus 460 g~~~~d~~~la~~i~~~ 476 (529)
+++++++++++.|+++
T Consensus 381 -~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 381 -LNTANVQRVAKAFAAV 396 (397)
T ss_dssp -CCTTTHHHHHHHHHHH
T ss_pred -cCHhhHHHHHHHHHhh
Confidence 3458899999998765
No 170
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.87 E-value=4.5e-21 Score=199.92 Aligned_cols=289 Identities=16% Similarity=0.144 Sum_probs=186.0
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
.+..++++ +++++++|.+. .+.+++|++|+..++.++++|||+|+++++.|++...... ......|.
T Consensus 63 ~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~----~~~~~~g~ 129 (398)
T 2rfv_A 63 NPTTDALE----KKLAVLERGEA-----GLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLS----HSMPKFGI 129 (398)
T ss_dssp CHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHH----THHHHTTC
T ss_pred ChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHH----HHHHHcCC
Confidence 34444444 78889999862 4667899999999999999999999999998865432100 00123344
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~ 300 (529)
+++.++++ |++++++.+++ ++++|++++++||+ ..|+++|.++|+++|+++|+|++|..+... .
T Consensus 130 --~~~~v~~~------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~-----~ 195 (398)
T 2rfv_A 130 --NVRFVDAA------KPEEIRAAMRP-ETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQ-----Q 195 (398)
T ss_dssp --EEEEECTT------SHHHHHHHCCT-TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-----C
T ss_pred --EEEEeCCC------CHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC-----C
Confidence 56665542 89999999987 89999999888886 789999999999999999999998766432 1
Q ss_pred CCC-cccEEEecccccccCC--C-CeEEEeeCCCcchhHHHh-hhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 301 PFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKDPVLGVELES-AINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 301 ~~~-~aDiv~~S~hK~l~Gp--r-gG~i~~~~~~~~~~~l~~-~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
++. ++|++++|+||++.|| | +|++++++ ++.+ .+.........++.+....+++..+++. +..+
T Consensus 196 ~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~ 264 (398)
T 2rfv_A 196 PLQLGADIVVHSVTKYINGHGDVIGGIIVGKQ------EFIDQARFVGLKDITGGCMSPFNAWLTLRGVKT-----LGIR 264 (398)
T ss_dssp GGGGTCSEEEEETTTTTTCSSCCCCEEEEECH------HHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT-----HHHH
T ss_pred chhhCCcEEEEeCcccccCCCCceEEEEEECH------HHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhh-----HHHH
Confidence 222 5899999999998655 4 39999987 4544 4443221110123333333333334432 3455
Q ss_pred HHHHHHHHHHHHHHHHhcC-c--------------EEecC--CCCCceEEEccCCCCCcHHHHHHhHhc---CCeEEcCC
Q 009673 376 QNKVVSNCRALASRLVELG-Y--------------KLVSG--GSDNHLVLVDLRPMGIDGARVEKILDM---ASITLNKN 435 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~~G-~--------------~v~~~--gt~~~~~~v~~~~~~i~~~~~~~~L~~---~GI~v~~~ 435 (529)
.++..++++.+.+.|++.+ + .+..+ .....++++++.. ......+++++ .||.++.+
T Consensus 265 ~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~l~~~~~~~~i~~~~G 341 (398)
T 2rfv_A 265 MERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAG---GLEAGRRMINSVELCLLAVSLG 341 (398)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT---HHHHHHHHHTTCSSSEECSCCS
T ss_pred HHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC---CHHHHHHHHHhCCcceeccCCC
Confidence 6677788888999988743 1 11110 0124566666642 12344445544 46666543
Q ss_pred CC------CC---CC--C-------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 436 SV------PG---DK--S-------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 436 ~~------Pg---~~--~-------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
.. |. +. + ...++.|||++...+ ++++++++.++|+++
T Consensus 342 ~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~----~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 342 DTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLED----PEDIINDLEHAIRKA 396 (398)
T ss_dssp SSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSC----HHHHHHHHHHHHHHH
T ss_pred CcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCC----HHHHHHHHHHHHHhh
Confidence 21 00 00 0 112578999987544 478888888887653
No 171
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.87 E-value=8.6e-21 Score=192.27 Aligned_cols=282 Identities=14% Similarity=0.105 Sum_probs=185.9
Q ss_pred HHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC
Q 009673 154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (529)
Q Consensus 154 ~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~ 233 (529)
++.+++++|.+ + .|.+++|++|+..++.++++|||+|+++++.|.++..... ......|. +++.++.
T Consensus 4 ~~~la~~~g~~-~----~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~~~~~~g~--~~~~~~~-- 70 (331)
T 1pff_A 4 EGKIAKLEHAE-A----CAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFE----HQLRKFGV--EVDFIDM-- 70 (331)
T ss_dssp HHHHHHHHTCS-E----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHH----THHHHTTC--EEEEECT--
T ss_pred HHHHHHHhCCC-e----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHH----HHHHhcCC--EEEEeCC--
Confidence 36788899987 2 4667999999999999999999999999998866432110 00112343 5555543
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHH-hCCEEEEecccccccccccccCCCCC-cccEEE
Q 009673 234 STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADA-VGALLMMDMAHISGLVAASVVADPFK-YCDVVT 309 (529)
Q Consensus 234 ~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~-~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~ 309 (529)
.|++++++.+++ ++++|++++++||+ ..|+++|.++|++ +|+++++|++|..|.... ++. ++|+++
T Consensus 71 ----~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~-----~~~~~~d~~~ 140 (331)
T 1pff_A 71 ----AVPGNIEKHLKP-NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTN-----PLDLGVDIVV 140 (331)
T ss_dssp ----TSTTHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCC-----GGGGTCSEEE
T ss_pred ----CCHHHHHHhhcC-CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCC-----hhhcCCcEEE
Confidence 478899999986 88999998888775 7799999999999 999999999998765421 222 579999
Q ss_pred ecccccccCC--C-CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 009673 310 TTTHKSLRGP--R-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 386 (529)
Q Consensus 310 ~S~hK~l~Gp--r-gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l 386 (529)
+|+||++.|| | +|+++++++ ++.+++......+..++++.....++..+++. .....++..++.+.+
T Consensus 141 ~s~~K~~~~~~~r~~G~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~ 210 (331)
T 1pff_A 141 HSATKYINGHTDVVAGLVCSRAD-----IIAKVKSQGIKDITGAIISPHDAWLITRGTLT-----LDMRVKRAAENAQKV 210 (331)
T ss_dssp EETTTTTSSSSSCCCEEEEECHH-----HHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH
T ss_pred EECccccCCCCCceEEEEEeCcH-----HHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch-----HHHHHHHHHHHHHHH
Confidence 9999998665 4 689998863 46666665443312223333232222233432 233455566777777
Q ss_pred HHHHHhc-C--------------cEEecC--CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCC----------
Q 009673 387 ASRLVEL-G--------------YKLVSG--GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPG---------- 439 (529)
Q Consensus 387 ~~~L~~~-G--------------~~v~~~--gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg---------- 439 (529)
.+.|++. . +++..+ ....+++.+.+. +.+.+.+.|++.||.+...+..+
T Consensus 211 ~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~ 286 (331)
T 1pff_A 211 AEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD----GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPAS 286 (331)
T ss_dssp HHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS----SHHHHHHHHHTCSSSEECSSCCSSSCEEECHHH
T ss_pred HHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC----CHHHHHHHHHhCCCceeccCCCCcceeeecchh
Confidence 7777653 1 111110 012334455443 46778899999999775432111
Q ss_pred --C---------CCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 440 --D---------KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 440 --~---------~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
. .....++.+||+++..+ ++++++.+.+.|+++
T Consensus 287 ~~~~~~~~~~~~~~g~~~~~iRis~~~~~----t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 287 MTHAGVPKEEREAAGLTDNLIRLSVGCEN----VQDIIDDLKQALDLV 330 (331)
T ss_dssp HTSTTSCHHHHHHTTCCTTEEEEECCSSC----HHHHHHHHHHHHHTC
T ss_pred hcccccCHHHHHhcCCCCCeEEEEEecCC----HHHHHHHHHHHHHHh
Confidence 0 00122578999987644 589999999888653
No 172
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.87 E-value=6e-21 Score=200.20 Aligned_cols=354 Identities=15% Similarity=0.175 Sum_probs=209.1
Q ss_pred hcccCChH-HHHHHHHHHHHhhcceeEecC----C---CCCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHH
Q 009673 82 SLGEADPE-VCEIITKEKERQFKSLELIAS----E---NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (529)
Q Consensus 82 ~l~~~d~~-~~~~~~~e~~~~~~~i~L~as----e---n~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a 153 (529)
.+...+|+ ++.+.+.-+......|||..+ + .++.+.|++|....+.+..+.+|.. ..|. .++.+.+
T Consensus 23 ~v~~~p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p---~~G~---p~lr~ai 96 (420)
T 4h51_A 23 KIQAQAPDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLP---ISGY---QPFIDEA 96 (420)
T ss_dssp TCCCCCCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCC---TTCC---HHHHHHH
T ss_pred CCCCCCCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCC---cCCh---HHHHHHH
Confidence 36666665 555544332222246898876 2 2456899999877666555555544 2233 3555444
Q ss_pred HHHHHHHcCCCCC-CCceeeecCChHHHHHHHHH----hhcCCCCEEEEcCCCCCccccccccccccccccccce-EEEE
Q 009673 154 QKRALAAFNLDEN-KWGVNVQPLSGSPANFEVYT----AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESM 227 (529)
Q Consensus 154 ~~~la~~~g~~~~-~~~~~V~~~sGs~A~~~~l~----all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-~~~v 227 (529)
.+.+ ||-... .-...++..+||.|+..++. ++++|||+|++++|.++.|.. .+...|.. +...
T Consensus 97 a~~~---~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~--------i~~~aG~~~V~~~ 165 (420)
T 4h51_A 97 VKII---YGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYG--------VVKAAGWKNICTY 165 (420)
T ss_dssp HHHH---HC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHH--------HHHHTTCCCEEEE
T ss_pred HHHh---cCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHH--------HHHHcCCeEEEee
Confidence 4433 443321 11134556677777665443 346899999999998876632 23344542 2222
Q ss_pred EcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673 228 PYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (529)
Q Consensus 228 ~~~v~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~ 300 (529)
++ .+++++.+|.+.+.+.++.. ++++++.++++||+ ..++++|.++|+++++++++|++ |.++.+.+....
T Consensus 166 ~~-~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~-Y~~~~~~~~~~~ 243 (420)
T 4h51_A 166 AY-YDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSA-YQGYASGSLDTD 243 (420)
T ss_dssp EC-EEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEES-CTTTTTSCHHHH
T ss_pred cc-ccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehh-hhhhccCCcccc
Confidence 22 23456788999988877642 45677778899997 23588999999999999999998 667765442211
Q ss_pred CC------C-c-ccEEEecccccc--cCCCCeEEEeeCCCc-chhHHHhhhcccccCCCCCCChHHHHHHHHHHHH----
Q 009673 301 PF------K-Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPV-LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK---- 365 (529)
Q Consensus 301 ~~------~-~-aDiv~~S~hK~l--~GprgG~i~~~~~~~-~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~---- 365 (529)
.+ + + .-+++.|++|++ +|+|.|++++..+.. ....+...+......... .|..+.....+..+.
T Consensus 244 ~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s-~~p~~~a~~~~~~l~d~~l 322 (420)
T 4h51_A 244 AYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYT-CPPAHGARLAHLILSNNEL 322 (420)
T ss_dssp THHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTS-SCCHHHHHHHHHHHHSHHH
T ss_pred hHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccC-cchHHHHHHHHHHhcCHHH
Confidence 11 0 1 127889999975 899999998876421 011122222222122222 333333222222222
Q ss_pred -HhcCchHHHHHHHHHHHHHHHHHHHHhcCcE----EecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCC
Q 009673 366 -HAQSPEFKVYQNKVVSNCRALASRLVELGYK----LVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGD 440 (529)
Q Consensus 366 -~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~----v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~ 440 (529)
.....+.+.+++++.++++.|.+.|++.|.. .+.+ ....+.++ +++.+++ ++|+++||.+ +|+
T Consensus 323 ~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~-q~GmF~~~-----gls~e~v-~~L~e~~Vy~----~~~- 390 (420)
T 4h51_A 323 RKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVIN-QIGMFSFL-----GLSKAQC-EYCQNHNIFI----TVS- 390 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHH-CCSSEEEC-----CCCHHHH-HHHHHTTEEC----CTT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecC-CCceEEec-----CcCHHHH-HHHHhCCEEE----cCC-
Confidence 1111234677888899999999999986632 1221 11233332 3455555 5788999987 332
Q ss_pred CCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 441 KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 441 ~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
| ||++. |++++.+++++++|+++++..
T Consensus 391 -------g-Ris~A-----gl~~~ni~~~a~aI~~vvr~i 417 (420)
T 4h51_A 391 -------G-RANMA-----GLTHETALMLAQTINDAVRNV 417 (420)
T ss_dssp -------C-EEEGG-----GCCHHHHHHHHHHHHHHHC--
T ss_pred -------C-EEEec-----cCCHHHHHHHHHHHHHHHHHh
Confidence 2 99865 356899999999999998753
No 173
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.87 E-value=1.3e-20 Score=199.20 Aligned_cols=289 Identities=16% Similarity=0.095 Sum_probs=188.5
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
++..+++| +++++++|.+. .|.++||++|+..++.++++|||+|+++++.|++.+.... ..+...|.
T Consensus 113 ~~~~~~l~----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~G~ 179 (445)
T 1qgn_A 113 NPTTVVLE----EKISALEGAES-----TLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIE----TILPKMGI 179 (445)
T ss_dssp CHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHH----HTGGGGTC
T ss_pred ChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHH----HHHHHcCC
Confidence 45555555 77888999862 4667999999999999999999999999988876432100 01223354
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCC-cEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRP-KLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~p-klIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
+++.++.+ |+++|++++++ ++ ++|++++++||+ ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 180 --~v~~v~~~------d~~~l~~ai~~-~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~-----~ 245 (445)
T 1qgn_A 180 --TATVIDPA------DVGALELALNQ-KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLN-----Q 245 (445)
T ss_dssp --EEEEECSS------CHHHHHHHHHH-SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTT-----C
T ss_pred --EEEEeCCC------CHHHHHHHhcc-CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 56665532 89999999988 78 999999888886 78999999999999999999999876542 2
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
.++. ++|++++|+||++.|+. +|++++++ ++.+.+...... ..+.++...... ++..+ ..+..+
T Consensus 246 ~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~------~l~~~l~~~~~~-~g~~~~~~~a~~---~~~~l--~~l~~r 313 (445)
T 1qgn_A 246 KALALGADLVLHSATKFLGGHNDVLAGCISGPL------KLVSEIRNLHHI-LGGALNPNAAYL---IIRGM--KTLHLR 313 (445)
T ss_dssp CTTTTTCSEEEECTTTTTTCSSSCCCEEEEECH------HHHHHHHHHHHH-HCCCCCHHHHHH---HHHHG--GGHHHH
T ss_pred CccccCCEEEEECCcccccccccceEEEEEECH------HHHHHHHHHHHH-hCCCCCHHHHHH---HHHhH--HHHHHH
Confidence 3344 68999999999997765 89999987 666655432111 112222222111 12222 234556
Q ss_pred HHHHHHHHHHHHHHHHhc-Cc-EEecCCC---------------CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCC-
Q 009673 376 QNKVVSNCRALASRLVEL-GY-KLVSGGS---------------DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV- 437 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~~-G~-~v~~~gt---------------~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~- 437 (529)
.++..++++.+.+.|++. ++ .+..++- ...++.+.+.....+...+...|+..+|.++.+..
T Consensus 314 ~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~~s~G~~~ 393 (445)
T 1qgn_A 314 VQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPSFGGCE 393 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCSSS
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEeccCCCCc
Confidence 677888899999999884 55 3433321 23445555542100123344444434666544321
Q ss_pred -----CCC------------CCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 438 -----PGD------------KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 438 -----Pg~------------~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
|.. .....++.||||+. .||++.+.+.|++++.
T Consensus 394 sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG--------~Edid~li~~L~~al~ 443 (445)
T 1qgn_A 394 SIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG--------VEDFDDLKADILQALD 443 (445)
T ss_dssp CEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC--------SSCHHHHHHHHHHHHH
T ss_pred eeeecccccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHh
Confidence 100 00122478999864 3689999999888775
No 174
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.87 E-value=3.2e-20 Score=194.12 Aligned_cols=289 Identities=18% Similarity=0.138 Sum_probs=190.4
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
|++..++++ +++++++|.+. .|..++|++|+..++.++++|||+|++++|.|++...... ..+...|
T Consensus 60 ~~~~~~~l~----~~ia~~~g~~~-----~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~----~~~~~~g 126 (404)
T 1e5e_A 60 GNPTVSNLE----GKIAFLEKTEA-----CVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFE----HALTKFG 126 (404)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHH----THHHHTT
T ss_pred cChHHHHHH----HHHHHHhCCCc-----EEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHH----HHHHHcC
Confidence 455555555 67788888862 3556888999999999999999999999998866432110 0123345
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHH-hCCEEEEeccccccccccccc
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADA-VGALLMMDMAHISGLVAASVV 298 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~-~g~~livD~ah~~Gli~~~~~ 298 (529)
. +++.++++ |++++++.+++ ++++|++++++||+ ..|+++|.++|++ +|+++++|++|..+...
T Consensus 127 ~--~~~~v~~~------d~~~l~~~i~~-~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~---- 193 (404)
T 1e5e_A 127 I--QVDFINTA------IPGEVKKHMKP-NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMIT---- 193 (404)
T ss_dssp C--EEEEECTT------STTHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTC----
T ss_pred C--EEEEECCC------CHHHHHHhcCC-CCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhC----
Confidence 4 66666543 78899999987 89999999998886 7799999999999 99999999998765421
Q ss_pred CCCCC-cccEEEecccccccC--CC-CeEEEeeCCCcchhHHHh-hhcccccCCCCCCChHHHHHHHHHHHHHhcCchHH
Q 009673 299 ADPFK-YCDVVTTTTHKSLRG--PR-GGMIFFKKDPVLGVELES-AINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (529)
Q Consensus 299 ~~~~~-~aDiv~~S~hK~l~G--pr-gG~i~~~~~~~~~~~l~~-~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~ 373 (529)
.++. ++|++++|+||++.| .| +|++++++ ++.+ ++.........++.+....++...+++ ...
T Consensus 194 -~~~~~~~di~~~S~sK~~~~~g~ri~G~~~~~~------~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~-----~~~ 261 (404)
T 1e5e_A 194 -NPVDFGVDVVVHSATKYINGHTDVVAGLICGKA------DLLQQIRMVGIKDITGSVISPHDAWLITRGLS-----TLN 261 (404)
T ss_dssp -CGGGGTCSEEEEETTTTTTCSSCCCCEEEEECH------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHT-----THH
T ss_pred -CccccCCEEEEEcCccccCCCCCCeEEEEEECH------HHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHh-----HHH
Confidence 2233 589999999999854 45 49999988 5555 665543221012223222222222343 234
Q ss_pred HHHHHHHHHHHHHHHHHHhcC-cE-EecCC---------------CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCC
Q 009673 374 VYQNKVVSNCRALASRLVELG-YK-LVSGG---------------SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNS 436 (529)
Q Consensus 374 ~~~~~i~~~a~~l~~~L~~~G-~~-v~~~g---------------t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~ 436 (529)
.+.++..++++.+.+.|++.. +. +..++ ....++.+++.. ..+++.++|++.||.+....
T Consensus 262 ~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~l~~~~i~~~~~s 338 (404)
T 1e5e_A 262 IRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS---GFEGAKKLLDNLKLITLAVS 338 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT---HHHHHHHHHHTCSSSEESSC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC---CHHHHHHHHHhCCCceeccC
Confidence 556677888888888888753 21 11110 013455556642 13567788899998543321
Q ss_pred CCCC----------C------------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 437 VPGD----------K------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 437 ~Pg~----------~------------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
.|. . ....++.|||++.. +|++++.+.|++++...
T Consensus 339 -~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~--------e~~~~li~~l~~al~~~ 395 (404)
T 1e5e_A 339 -LGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI--------EDADELIADFKQGLDAL 395 (404)
T ss_dssp -CCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS--------SCHHHHHHHHHHHHHHH
T ss_pred -CCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC--------CCHHHHHHHHHHHHHHH
Confidence 111 0 00115789999642 78888888888887643
No 175
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.87 E-value=1.4e-20 Score=198.79 Aligned_cols=291 Identities=13% Similarity=0.062 Sum_probs=187.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh-cCCCCEEEEcCCCCCccccccccccccccccccceE
Q 009673 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF 224 (529)
Q Consensus 147 d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~al-l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~ 224 (529)
.++...+++++++++|++++ ++.+++|+ .++.+++.++ +++||+|+++++.|.+...... ......|.
T Consensus 107 ~~~~~~~~~~la~~~g~~~~----~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~----~~a~~~G~-- 176 (438)
T 1wyu_A 107 LQATFEYQTMIAELAGLEIA----NASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLR----AYLEAVGA-- 176 (438)
T ss_dssp HHHHHHHHHHHHHHHTSSEE----CSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHH----HHHHHTTC--
T ss_pred HHHHHHHHHHHHHHhCCCcc----ceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHH----HHHHHCCC--
Confidence 34455667999999999864 44456665 4445444443 6899999999988755421100 00122454
Q ss_pred EEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecc-cccccccccccCCC
Q 009673 225 ESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMA-HISGLVAASVVADP 301 (529)
Q Consensus 225 ~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~a-h~~Gli~~~~~~~~ 301 (529)
+++.++. +++.+|+++ +++ ++++|+++++ |++ ..|+++|.++|+++|+++++|.. +..|.. ..+
T Consensus 177 ~v~~v~~--~~~~~d~~~----i~~-~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~-----~~~ 243 (438)
T 1wyu_A 177 KLLTLPL--EGGRTPLPE----VGE-EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVL-----KPP 243 (438)
T ss_dssp EEEEECC--BTTBCCCCC----CCT-TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTB-----CCH
T ss_pred EEEEEcC--cCCccCHHH----hCC-CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCc-----CCC
Confidence 6666655 356788776 555 7899999887 554 77999999999999999997754 444432 111
Q ss_pred CC-cccEEEecccc-----cccCCCCeEEEeeCCCcchhHHHhhhcccc--------------c---------CCCCCCC
Q 009673 302 FK-YCDVVTTTTHK-----SLRGPRGGMIFFKKDPVLGVELESAINNAV--------------F---------PGLQGGP 352 (529)
Q Consensus 302 ~~-~aDiv~~S~hK-----~l~GprgG~i~~~~~~~~~~~l~~~i~~~~--------------~---------p~~~g~p 352 (529)
-. ++|++++|.|| |+.||++|++++++ ++.+.+.... + ....+++
T Consensus 244 ~~~g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~------~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~ 317 (438)
T 1wyu_A 244 GAYGADIAVGDGQSLGLPMGFGGPHFGFLATKK------AFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKS 317 (438)
T ss_dssp HHHTCSEEEEECTTTTCCCGGGCSCCEEEEECG------GGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSC
T ss_pred ccCCCCEEEECCcccCCCccCCCCCeeEEEEcH------HHHHhCCCceeccccccCCCcceeeeccccccccchhcccC
Confidence 11 58999999777 68899779999987 4444331100 0 0001233
Q ss_pred hH---HHHHHHHHH--HHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CcEEecCCCCCceEEEccCCCCCcHHHHHHhHh
Q 009673 353 HN---HTIGGLAVC--LKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILD 426 (529)
Q Consensus 353 ~~---~~iaala~a--l~~~~~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~ 426 (529)
+. ..+++++++ +......++++..+++.++++++.+.|++. |+++..+. ..+.++.++. +.+..++.+.|.
T Consensus 318 ~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~--~~~~~~~~~~-~~~~~~~~~~L~ 394 (438)
T 1wyu_A 318 NITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPK--PFFNEFALAL-PKDPEAVRRALA 394 (438)
T ss_dssp CCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCS--SBCSEEEEEC-SSCHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCC--CeEEEEEEeC-CCCHHHHHHHHH
Confidence 22 344444444 544443457788889999999999999986 99987642 2222222321 235678888888
Q ss_pred cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 427 MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 427 ~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
+.||.+.. .|+.. +.++.|||++...+ +++|++++++.|++++
T Consensus 395 ~~gi~v~~--~~~~~--~~~~~lRis~~~~~----t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 395 ERGFHGAT--PVPRE--YGENLALFAATELH----EEEDLLALREALKEVL 437 (438)
T ss_dssp HTTCCCCE--ECCTT--SCSSEEEEECCTTC----CHHHHHHHHHHHHHHC
T ss_pred HCCceecc--ccccc--cCCCeEEEEecccC----CHHHHHHHHHHHHHHh
Confidence 88998721 01111 12578999987544 4899999999987653
No 176
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.86 E-value=5.5e-21 Score=199.70 Aligned_cols=345 Identities=16% Similarity=0.149 Sum_probs=199.8
Q ss_pred hhcccCChH-HHHHHHHHHHHh-hcceeEecCCC---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHH
Q 009673 81 YSLGEADPE-VCEIITKEKERQ-FKSLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (529)
Q Consensus 81 ~~l~~~d~~-~~~~~~~e~~~~-~~~i~L~asen---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~ 155 (529)
.++...+++ ++.+.+...... .+.|+|..++. ..++.+.+++..... ....+|.. .....++++...+
T Consensus 18 ~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~-~~~~~y~~------~~g~~~lr~~ia~ 90 (409)
T 4eu1_A 18 GPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQATL-GTNMDYAP------VTGIASFVEEAQK 90 (409)
T ss_dssp ---------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTCCC-CSCCCCCC------TTCCHHHHHHHHH
T ss_pred hcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhcCc-cccccCCC------CCCcHHHHHHHHH
Confidence 345566666 566655444322 35688876653 346667777765521 11223322 1122355533333
Q ss_pred HHHHHcCCC-----CCCCceeeecCChHHHHHHH---HHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEE
Q 009673 156 RALAAFNLD-----ENKWGVNVQPLSGSPANFEV---YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESM 227 (529)
Q Consensus 156 ~la~~~g~~-----~~~~~~~V~~~sGs~A~~~~---l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v 227 (529)
++ +|.+ ++++ ..+++.+|++++..+ +.++++|||+|++++|.|.++.. .+...|. +++
T Consensus 91 ~~---~~~~~~~~~~~~i-~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~ 156 (409)
T 4eu1_A 91 LC---FGPTCAALRDGRI-ASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHES--------IFAKAGM--ELT 156 (409)
T ss_dssp HH---HCSSCHHHHTTCE-EEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHH--------HHHHTTC--EEE
T ss_pred HH---cCCCchhhccCce-eeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH--------HHHHcCC--eEE
Confidence 33 3655 3322 112345555676654 44567999999999998865531 2344565 666
Q ss_pred EcccC-CCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEeccccccccccccc-
Q 009673 228 PYRLD-ESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV- 298 (529)
Q Consensus 228 ~~~v~-~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~~Gli~~~~~- 298 (529)
.++++ .+++.+|++++++.+++. +++++++++|+||+ ..+ +++|.++|+++|+++|+|++|. ++...+..
T Consensus 157 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~-~~~~~~~~~ 235 (409)
T 4eu1_A 157 PYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQ-GFATGQLDY 235 (409)
T ss_dssp EECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT-TTTTSCHHH
T ss_pred EEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccc-ccccCCccc
Confidence 76663 346789999999999742 45666778899987 444 6669999999999999999954 44433210
Q ss_pred -CCC---C-C--cccEEEecccccc--cCCCCeEE--EeeCCCcchhH----HHhhhcccccCCCCCCChHHHHHHHHHH
Q 009673 299 -ADP---F-K--YCDVVTTTTHKSL--RGPRGGMI--FFKKDPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVC 363 (529)
Q Consensus 299 -~~~---~-~--~aDiv~~S~hK~l--~GprgG~i--~~~~~~~~~~~----l~~~i~~~~~p~~~g~p~~~~iaala~a 363 (529)
..+ + . ...++++|++|++ +|+|.||+ +..++ + +.+.+.........+.+.. ..++++.+
T Consensus 236 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~ 309 (409)
T 4eu1_A 236 DAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASA-----EEAKRLVSQLALLIRPMYNNPPLY-GAWVVSSI 309 (409)
T ss_dssp HTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSH-----HHHHHHHHHHHHHHHHHHSSCCHH-HHHHHHHH
T ss_pred chHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCH-----HHHHHHHHHHHHHHhhhcCCCChH-HHHHHHHH
Confidence 000 0 1 1237889999986 68888996 54442 4 4444433221222223233 33333334
Q ss_pred HHHhc-----CchHHHHHHHHHHHHHHHHHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcC
Q 009673 364 LKHAQ-----SPEFKVYQNKVVSNCRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNK 434 (529)
Q Consensus 364 l~~~~-----~~~~~~~~~~i~~~a~~l~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~ 434 (529)
++... ....++.++++.++++.+.+.|++.| +.+..+. .+.+.|+++ +.+.+.++|+++||.+.
T Consensus 310 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~ll~~~gv~v~- 382 (409)
T 4eu1_A 310 LKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQ-VGMMAYTGL-----TREQVELLRSEYHIYMT- 382 (409)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHS-CSSEEECCC-----CHHHHHHHHHHHCEECC-
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCC-ceEEEEeCC-----CHHHHHHHHHcCCEEEc-
Confidence 44210 12246677888999999999999877 5544331 234445333 45667777888999983
Q ss_pred CCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 435 NSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 435 ~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
|+ .||++.. .+++|++++++.|++++
T Consensus 383 ---p~---------~Ri~~~~-----~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 383 ---LN---------GRAAVSG-----LNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp ---TT---------CEEEGGG-----CCTTTHHHHHHHHHHHH
T ss_pred ---CC---------CEEEEEe-----cCHhhHHHHHHHHHHHh
Confidence 32 3777643 34688999999998765
No 177
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.86 E-value=4.6e-21 Score=208.06 Aligned_cols=340 Identities=14% Similarity=0.115 Sum_probs=204.0
Q ss_pred ceeEecCCC-CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC--CCCCceeeecCChH-H
Q 009673 104 SLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS-P 179 (529)
Q Consensus 104 ~i~L~asen-~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~--~~~~~~~V~~~sGs-~ 179 (529)
.|+|..+++ +.++.+.+++...+.. .+||... ++. ...++++..++.+.++.. .... .+|.+++|+ +
T Consensus 106 ~i~l~~g~~~~~~~~~~~al~~~~~~---~~Y~~~~--g~~---~lr~~ia~~~~~~~~~~~~~~~~~-~~I~~t~G~~e 176 (546)
T 2zy4_A 106 SLSYVRDQLGLDPAAFLHEMVDGILG---CNYPVPP--RML---NISEKIVRQYIIREMGADAIPSES-VNLFAVEGGTA 176 (546)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHT---CSCCSSS--SCC---HHHHHHHHHHHHHHTTCTTSCGGG-EEEEEEEHHHH
T ss_pred hhecccCCCCCCChHHHHHHHHhhhc---CCCCCCc--CCH---HHHHHHHHHHHHHhccCCCCCCCc-ceEEEECCHHH
Confidence 355554554 4566777777665531 2344311 111 233445556666666442 1001 367778887 8
Q ss_pred HHHHHHHh-----hcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCc
Q 009673 180 ANFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPK 253 (529)
Q Consensus 180 A~~~~l~a-----ll~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~-~~~iD~d~le~~i~~~~pk 253 (529)
++..++.+ +++|||+|++++|.|.++.. ...+.+.+.++++++++++ ++.+|+++|++.++. +++
T Consensus 177 al~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~--------~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k 247 (546)
T 2zy4_A 177 AMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIE--------IPELAQYALEEVAINADPSLNWQYPDSELDKLKDP-AIK 247 (546)
T ss_dssp HHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHH--------HHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGST-TEE
T ss_pred HHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHH--------HHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCC-CCe
Confidence 88888877 58999999999998755421 1112332346777777654 367999999988765 789
Q ss_pred EEEEcCCCCCC--CCC---HHHHHHHH--HHhCCEEEEecccccccccccccCCCC---CcccEEEecccccc--cCCCC
Q 009673 254 LIIAGASAYPR--DFD---YPRMRQIA--DAVGALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSL--RGPRG 321 (529)
Q Consensus 254 lIi~~~s~~p~--~~d---~~~i~~ia--~~~g~~livD~ah~~Gli~~~~~~~~~---~~aDiv~~S~hK~l--~Gprg 321 (529)
+|++++|+||+ ..+ +++|.++| +++|++||+|++|. ++.. + ..+.. ...++++.|+||++ +|+|.
T Consensus 248 ~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~-~~~~-~-~~s~~~~~~~~~i~~~S~SK~~g~~GlRi 324 (546)
T 2zy4_A 248 IFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG-TFAD-D-FQSLFAICPENTLLVYSFSKYFGATGWRL 324 (546)
T ss_dssp EEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTG-GGST-T-CCCHHHHCGGGEEEEEESTTTTTCGGGCE
T ss_pred EEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcch-hhcc-c-CcCHHHhCCCCEEEEEeCccccCCCCcce
Confidence 99988999997 444 66788888 77899999999965 3332 1 11111 13568999999987 68999
Q ss_pred eEEEeeCCCcchhHHHhhhcccc-----------------------------------cCCC-CCCChHHHHHHHHHHH-
Q 009673 322 GMIFFKKDPVLGVELESAINNAV-----------------------------------FPGL-QGGPHNHTIGGLAVCL- 364 (529)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~-----------------------------------~p~~-~g~p~~~~iaala~al- 364 (529)
||++++++ ++.+++.... .... .+.+...+.+....++
T Consensus 325 G~~~~~~~-----~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~ 399 (546)
T 2zy4_A 325 GVVAAHQQ-----NVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLF 399 (546)
T ss_dssp EEEEEESS-----CHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHH
T ss_pred EEEEECCH-----HHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHH
Confidence 99999874 2433331100 0011 1222333332111011
Q ss_pred HHhc-CchH-HHHHHHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCC---------------CC-cHHHHHHhHh
Q 009673 365 KHAQ-SPEF-KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM---------------GI-DGARVEKILD 426 (529)
Q Consensus 365 ~~~~-~~~~-~~~~~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~---------------~i-~~~~~~~~L~ 426 (529)
..+. ...+ ++.++.+.++++.+.+.|. .++.+.. ...++++|+++... +. +.+.+.++|+
T Consensus 400 all~~~~~~~~~~r~~~~~r~~~l~~~L~-~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~ 477 (546)
T 2zy4_A 400 ALMDEADEYKHTLKQLIRRRETTLYRELG-MPPLRDE-NAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIAD 477 (546)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHHHHGGGT-SSCCCCT-TBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHhcC-CCcccCC-CCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHH
Confidence 1111 1233 5556666777777777774 4443222 22345667776310 11 2345778889
Q ss_pred cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 427 MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 427 ~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
++||.+.+ |......++++||++.. .++++++++++.|++++...
T Consensus 478 ~~gV~v~p----G~~F~~~~~~iRis~~~-----~~~e~i~~~~~~l~~~l~~~ 522 (546)
T 2zy4_A 478 ETGIVLLP----GRGFGSNRPSGRASLAN-----LNEYEYAAIGRALRKMADEL 522 (546)
T ss_dssp HHSCCCEE----SSCTTCSSCEEEEESSS-----SCHHHHHHHHHHHHHHHHHH
T ss_pred HCCEEEeC----ccccCCCCCeEEEEecc-----CCHHHHHHHHHHHHHHHHHH
Confidence 99999954 44311235689999742 35899999999999987654
No 178
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.86 E-value=1.2e-19 Score=190.28 Aligned_cols=291 Identities=16% Similarity=0.150 Sum_probs=185.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccce
Q 009673 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 223 (529)
Q Consensus 144 ~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~ 223 (529)
+..++++ +++++++|.+. .+.+++|++|+..++.++++|||+|+++++.|.+.+.... ..+...|.
T Consensus 56 ~~~~~l~----~~la~~~g~~~-----~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~----~~~~~~g~- 121 (412)
T 2cb1_A 56 PTAKALE----ERLKALEGALE-----AVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFG----QVLSLMGV- 121 (412)
T ss_dssp HHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHH----HTTTTTTC-
T ss_pred hHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHH----HHHHHcCC-
Confidence 4445555 77888999862 3456788899999999999999999999998865432110 01223443
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCC
Q 009673 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP 301 (529)
Q Consensus 224 ~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~ 301 (529)
+++.+++ |+++|++.+++ ++++|++++++||+ ..|+++|.++|+++|+++|+|++|..+... ..+
T Consensus 122 -~~~~~~~-------~~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~----~~~ 188 (412)
T 2cb1_A 122 -TVRYVDP-------EPEAVREALSA-KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGAL----CRP 188 (412)
T ss_dssp -EEEEECS-------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTS----CCG
T ss_pred -EEEEECC-------CHHHHHHHhcc-CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccc----CCc
Confidence 5666543 38999999987 89999998888775 789999999999999999999998765111 122
Q ss_pred CC-cccEEEecccccccCCC--CeEEEeeC-CCcc-----h----------------hHHHhhhcccccCCCCCCChHHH
Q 009673 302 FK-YCDVVTTTTHKSLRGPR--GGMIFFKK-DPVL-----G----------------VELESAINNAVFPGLQGGPHNHT 356 (529)
Q Consensus 302 ~~-~aDiv~~S~hK~l~Gpr--gG~i~~~~-~~~~-----~----------------~~l~~~i~~~~~p~~~g~p~~~~ 356 (529)
.. ++|++++|+||++.||. .|++++.+ .... . .++.+.++...... .|......
T Consensus 189 ~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~-~g~~~~~~ 267 (412)
T 2cb1_A 189 LAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSL-CGMALSPF 267 (412)
T ss_dssp GGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTT-TCCCCCHH
T ss_pred cccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHh-cCCCCChH
Confidence 22 58999999999997764 36555544 2100 0 02223332221111 11111111
Q ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEEe-cCCC---------------CCceEEEccCCCCCcHH
Q 009673 357 IGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLV-SGGS---------------DNHLVLVDLRPMGIDGA 419 (529)
Q Consensus 357 iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v~-~~gt---------------~~~~~~v~~~~~~i~~~ 419 (529)
.++ .++..+ ..+..+.++..++++++.+.|.+ .++.++ .++. ...++.+.+ + +.+
T Consensus 268 ~a~--~~~~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~---~-~~~ 339 (412)
T 2cb1_A 268 NAY--LLFQGL--ETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL---G-DLE 339 (412)
T ss_dssp HHH--HHHHHG--GGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC---S-SHH
T ss_pred HhH--HHHcCC--chHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe---C-CHH
Confidence 111 122222 23456667778899999999988 477744 2321 123444444 3 667
Q ss_pred HHHHhHhcCCeEEcCCC---------CCCCCC------------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 420 RVEKILDMASITLNKNS---------VPGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 420 ~~~~~L~~~GI~v~~~~---------~Pg~~~------------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
.+.+.|++.||.+ ..+ .|.... ...++.||+++...++ +++++.+.+.|++
T Consensus 340 ~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~----~~~i~~l~~al~~ 411 (412)
T 2cb1_A 340 RASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDP----LDLLALFEEALEA 411 (412)
T ss_dssp HHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCH----HHHHHHHHHHHHC
T ss_pred HHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCH----HHHHHHHHHHHhh
Confidence 8889999999998 552 121100 0115789999876554 7888888887753
No 179
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.86 E-value=3.9e-20 Score=196.12 Aligned_cols=350 Identities=16% Similarity=0.168 Sum_probs=205.9
Q ss_pred hcccCChH-HHHHHHHHHHHhh-cceeEecCCC-------CCcHHHHHHHhhhh--hccCCCCCCCCCCCCCchhHHHHH
Q 009673 82 SLGEADPE-VCEIITKEKERQF-KSLELIASEN-------FTSRAVMEAVGSCL--TNKYSEGLPGKRYYGGNEYIDELE 150 (529)
Q Consensus 82 ~l~~~d~~-~~~~~~~e~~~~~-~~i~L~asen-------~~~~~V~eal~~~l--~~~y~~G~p~~r~~~g~~~~d~lE 150 (529)
.+...+++ ++.+...-..... ..|+|..+.. ++.++|.+++.... ......+|+. ..| ..+++
T Consensus 27 ~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~---~~G---~~~lr 100 (448)
T 3meb_A 27 GFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPP---VAG---FPLFL 100 (448)
T ss_dssp TCCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCC---TTC---CHHHH
T ss_pred cCCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCC---Ccc---hHHHH
Confidence 35555554 4554433222222 3588865432 34578888865443 1122223332 112 23444
Q ss_pred HHHHHHHHHH-cCCC-----CCCCceeeecCChHHHHHH--HHHhhcCCCCEEEEcCCCCCccccccccccccccc----
Q 009673 151 TLCQKRALAA-FNLD-----ENKWGVNVQPLSGSPANFE--VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS---- 218 (529)
Q Consensus 151 ~~a~~~la~~-~g~~-----~~~~~~~V~~~sGs~A~~~--~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~---- 218 (529)
+.++++ +|.+ ++++ +.+|+.+|++|+.. .+.++++|||+|++++|.|.++.. .+.
T Consensus 101 ----~~ia~~l~g~~~~~~~~~~i-~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~~~ 167 (448)
T 3meb_A 101 ----EAAQFLMFGKDSKAAQEGRI-ASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYG--------IYDKVFN 167 (448)
T ss_dssp ----HHHHHHHHCTTCHHHHTTCE-EEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHH--------HHHHHHC
T ss_pred ----HHHHHHhcCCCccccCcCcE-EEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHH--------HHHhhHH
Confidence 333444 4876 3332 22335556689876 567788999999999998876532 233
Q ss_pred cccceEEEEEccc-CCC-CCCCCHHHHHHHhhh--cCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEecccc
Q 009673 219 GTSIYFESMPYRL-DES-TGLVDYDMLEKTAIL--FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHI 289 (529)
Q Consensus 219 ~~g~~~~~v~~~v-~~~-~~~iD~d~le~~i~~--~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~livD~ah~ 289 (529)
..|. +++.+++ +++ ++.+|+|++++.+++ .+++++++++++||+ ..+ +++|+++|+++|+++++|++|
T Consensus 168 ~~G~--~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay- 244 (448)
T 3meb_A 168 KLKV--PYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAY- 244 (448)
T ss_dssp TTTS--CCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC-
T ss_pred hCCC--eEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEeccc-
Confidence 4454 5666666 544 589999999999985 246777888899987 344 667999999999999999994
Q ss_pred ccccccccc--CCCC-----Ccc-cEEEecccccc--cCCCCeEE--Ee--------eCCCcchhHHHhhhcccccCCCC
Q 009673 290 SGLVAASVV--ADPF-----KYC-DVVTTTTHKSL--RGPRGGMI--FF--------KKDPVLGVELESAINNAVFPGLQ 349 (529)
Q Consensus 290 ~Gli~~~~~--~~~~-----~~a-Div~~S~hK~l--~GprgG~i--~~--------~~~~~~~~~l~~~i~~~~~p~~~ 349 (529)
.++...+.. ..++ .+. .+++.|+||++ .|+|.|++ ++ .++. ...++.+.+.........
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~-~~~~l~~~l~~~~~~~~~ 323 (448)
T 3meb_A 245 QGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKA-LSAAMVSGMTLQIRKTWS 323 (448)
T ss_dssp TTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHH-HHHHHHHHHHHHHHTTTS
T ss_pred ccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHH-HHHHHHHHHHHHHhcccC
Confidence 444433210 0001 122 37789999986 58888997 55 3210 000233333322222222
Q ss_pred CCChHHHHHHHHHHHHHhc-----CchHHHHHHHHHHHHHHHHHHHHhcCcE---------EecCCCCCceEEEccCCCC
Q 009673 350 GGPHNHTIGGLAVCLKHAQ-----SPEFKVYQNKVVSNCRALASRLVELGYK---------LVSGGSDNHLVLVDLRPMG 415 (529)
Q Consensus 350 g~p~~~~iaala~al~~~~-----~~~~~~~~~~i~~~a~~l~~~L~~~G~~---------v~~~gt~~~~~~v~~~~~~ 415 (529)
+.|.. ...+++.+|.... ....++..+++.++++.+.+.|++.|++ +..+ ....+.|+++
T Consensus 324 ~~~~~-~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~---- 397 (448)
T 3meb_A 324 MSAIH-GAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILT-AIGMFTFTGL---- 397 (448)
T ss_dssp SCCHH-HHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHH-CCSSEEECCC----
T ss_pred CccHH-HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCC-CceEEEecCC----
Confidence 33333 3333333332110 0224667788889999999999886432 2222 1234445444
Q ss_pred CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 416 IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 416 i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+.+.+..+|+++||.+. ||. .||++.. +++++++++++.|+++++
T Consensus 398 -~~~~~~~ll~~~gV~v~----~G~--------gRis~a~-----~~~~~i~~~~~~l~~~l~ 442 (448)
T 3meb_A 398 -TPEHVDYLKEKWSIYLV----KAG--------GRMSMCG-----LTESNCDYVAEAIHDAVT 442 (448)
T ss_dssp -CHHHHHHHHHHHCEEEC----SGG--------GEEEGGG-----CCTTTHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHhCCEEEe----CCC--------cEEEEec-----CCHHHHHHHHHHHHHHHH
Confidence 45667777789999993 432 2988743 346789999999999886
No 180
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.86 E-value=9.7e-21 Score=198.08 Aligned_cols=288 Identities=18% Similarity=0.131 Sum_probs=186.0
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
++..+++| +.+++++|.+. .|.++||++|+..++. +++|||+|+++++.|++++... .......|.
T Consensus 66 ~p~~~~l~----~~la~~~g~~~-----~i~~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~----~~~~~~~G~ 131 (403)
T 3cog_A 66 NPTRNCLE----KAVAALDGAKY-----CLAFASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYF----RQVASEFGL 131 (403)
T ss_dssp CHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHH----HHTGGGGTC
T ss_pred CchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHH----HHHHHHcCC
Confidence 34455665 67888898862 4667999999999988 8999999999999887643211 001123454
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhC-CEEEEecccccccccccccC
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVG-ALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g-~~livD~ah~~Gli~~~~~~ 299 (529)
+++.++++ |++++++.+++ ++++|++++++||+ ..|+++|.++|+++| +++++|++|..+.. .
T Consensus 132 --~v~~v~~~------d~~~l~~~i~~-~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~-----~ 197 (403)
T 3cog_A 132 --KISFVDCS------KIKLLEAAITP-ETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYF-----Q 197 (403)
T ss_dssp --EEEEECTT------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTT-----C
T ss_pred --EEEEECCC------CHHHHHHhcCc-CCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCccccc-----C
Confidence 66665542 89999999987 89999999898886 789999999999999 99999999776532 1
Q ss_pred CCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
.++. ++|+++.|+||++.||. +|+++++++ ++.+++.....++ .++++....+++..+++ .+..+
T Consensus 198 ~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~-----~l~~~l~~~~~~~-g~~~~~~~~~~~~~~l~-----~l~~r 266 (403)
T 3cog_A 198 RPLALGADISMYSATKYMNGHSDVVMGLVSVNCE-----SLHNRLRFLQNSL-GAVPSPIDCYLCNRGLK-----TLHVR 266 (403)
T ss_dssp CTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCH-----HHHHHHHHHHHHH-CCCCCHHHHHHHHHHHT-----THHHH
T ss_pred CccccCCeEEEEcChhhccCCCCCeEEEEEECcH-----HHHHHHHHHHHhc-CCCCCHHHHHHHHhhhh-----HHHHH
Confidence 2333 68999999999998764 599999643 6666665432221 11222222222222332 23455
Q ss_pred HHHHHHHHHHHHHHHHhcC---------------cEEecC--CCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcC---C
Q 009673 376 QNKVVSNCRALASRLVELG---------------YKLVSG--GSDNHLVLVDLRPMGIDGARVEKILDMASITLNK---N 435 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~~G---------------~~v~~~--gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~---~ 435 (529)
.++..+|+..+.+.|++.. +.+..+ .....++.+.+.. ..+.+.++|++.||.+.. +
T Consensus 267 ~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~---~~~~~~~~l~~~~i~~~~~s~G 343 (403)
T 3cog_A 267 MEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKG---TLQHAEIFLKNLKLFTLAESLG 343 (403)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS---CHHHHHHHHHHCSSSEECSCCS
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecC---CHHHHHHHHHhCCcceEccCCC
Confidence 6777788888888887641 111110 0013445555542 235677888888886532 1
Q ss_pred C------CCCCCC------------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 436 S------VPGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 436 ~------~Pg~~~------------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
. .|+... ...++.|||++...+ ++++++.+.++|+++
T Consensus 344 ~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~----~~d~i~~l~~al~~~ 398 (403)
T 3cog_A 344 GFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLED----EEDLLEDLDQALKAA 398 (403)
T ss_dssp SSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSC----HHHHHHHHHHHHHHH
T ss_pred CcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCC----HHHHHHHHHHHHHHh
Confidence 1 232110 122578999987533 366666666666543
No 181
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.86 E-value=1.2e-20 Score=200.37 Aligned_cols=328 Identities=17% Similarity=0.203 Sum_probs=200.0
Q ss_pred HHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC----C
Q 009673 116 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK----P 191 (529)
Q Consensus 116 ~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~----p 191 (529)
++|.+++...+.... ..|+..+...+++ +++++++|.+. .+.+++|++|+..++.++++ |
T Consensus 55 ~~v~~a~~~~~~~~~-------~~y~~~~~~~~l~----~~la~~~~~~~-----v~~t~ggt~A~~~al~~~~~~~~~~ 118 (467)
T 1ax4_A 55 NAMSDHQWAAMITGD-------EAYAGSRNYYDLK----DKAKELFNYDY-----IIPAHQGRGAENILFPVLLKYKQKE 118 (467)
T ss_dssp CCEEHHHHHHHHTCC-------CCSSSCHHHHHHH----HHHHHHHCCCE-----EEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhcc-------cccccCccHHHHH----HHHHHHcCCCc-----EEEcCCcHHHHHHHHHHHHHhhccC
Confidence 566666665543211 1133334455555 67788888742 24456678999999999988 9
Q ss_pred CCE---EEEcCCCCCccccccccccccccccccceEEEEEcccC----C-----CCCCCCHHHHHHHhhhc---CCcEEE
Q 009673 192 HDR---IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD----E-----STGLVDYDMLEKTAILF---RPKLII 256 (529)
Q Consensus 192 GD~---Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~----~-----~~~~iD~d~le~~i~~~---~pklIi 256 (529)
||+ |++. ..|.+.. ...+...|. +++.++.+ . .++.+|+++|++++++. ++++|+
T Consensus 119 Gd~~~~viv~-~~~~~~~-------~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi 188 (467)
T 1ax4_A 119 GKAKNPVFIS-NFHFDTT-------AAHVELNGC--KAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIV 188 (467)
T ss_dssp TCCSSCEEEE-SSCCHHH-------HHHHHHTTC--EEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEE
T ss_pred CCccceEEEe-ccccchh-------hHHHhccCC--ceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEE
Confidence 998 8887 3331110 012233443 44433221 1 14578999999999853 588999
Q ss_pred EcCCCCCC---C---CCHHHHHHHHHHhCCEEEEeccccc-ccc--------cccccCCCC-----CcccEEEecccccc
Q 009673 257 AGASAYPR---D---FDYPRMRQIADAVGALLMMDMAHIS-GLV--------AASVVADPF-----KYCDVVTTTTHKSL 316 (529)
Q Consensus 257 ~~~s~~p~---~---~d~~~i~~ia~~~g~~livD~ah~~-Gli--------~~~~~~~~~-----~~aDiv~~S~hK~l 316 (529)
+++++||+ . .++++|+++|++||++||+|++|.. |.. ..+.....+ .++|++++|+||++
T Consensus 189 ~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~ 268 (467)
T 1ax4_A 189 STVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDP 268 (467)
T ss_dssp EESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTT
T ss_pred EeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccC
Confidence 98777664 2 2478999999999999999998765 221 111100001 24789999999998
Q ss_pred cCCCCeEEEeeCCCcchhHHHhhhcccc--cCC--CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh
Q 009673 317 RGPRGGMIFFKKDPVLGVELESAINNAV--FPG--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (529)
Q Consensus 317 ~GprgG~i~~~~~~~~~~~l~~~i~~~~--~p~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~ 392 (529)
+.|-||+++.+++. ++.+.+.... +.+ ..++.....+++++.+++.... .++.++..++++.+.+.|.+
T Consensus 269 g~~~Gg~~~~~d~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~ 341 (467)
T 1ax4_A 269 LLNIGGLVAIRDNE----EIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIGQVKYLGDRLRE 341 (467)
T ss_dssp CCSSCEEEEESSCH----HHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcceEEEeCCHH----HHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHh
Confidence 55557888887310 1333322110 011 1234444455555556765432 23344555778889999988
Q ss_pred cCcEEecCCCCCceEEEc-------cCCCCCcHHHHHHhH-hcCCeEEcC-CCC-----C--CCCCCCCCCeEEEccCCC
Q 009673 393 LGYKLVSGGSDNHLVLVD-------LRPMGIDGARVEKIL-DMASITLNK-NSV-----P--GDKSALVPGGIRIGSPAM 456 (529)
Q Consensus 393 ~G~~v~~~gt~~~~~~v~-------~~~~~i~~~~~~~~L-~~~GI~v~~-~~~-----P--g~~~~~~~~~iRig~~~~ 456 (529)
.|++++.+ ...+++|++ +...+.+..++.+.| +++||.+.. +.. | |...+...+.|||+++..
T Consensus 342 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~ 420 (467)
T 1ax4_A 342 AGIPIQYP-TGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARR 420 (467)
T ss_dssp TTCCBCSS-CCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTT
T ss_pred CCCCcccC-CCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccc
Confidence 88877643 234667777 322234556677777 899999865 211 1 100011237899998743
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 457 TTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 457 tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
+ ++++|++++++.|.++++..
T Consensus 421 ~---~t~e~i~~~~~~l~~~~~~~ 441 (467)
T 1ax4_A 421 V---YTNDHMDYIADALIGLKEKF 441 (467)
T ss_dssp S---SCHHHHHHHHHHHHTTHHHH
T ss_pred c---CCHHHHHHHHHHHHHHHHhh
Confidence 2 56899999999999988653
No 182
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.86 E-value=5e-21 Score=200.01 Aligned_cols=327 Identities=16% Similarity=0.139 Sum_probs=199.2
Q ss_pred cceeEecCC--C-----CCcHHHHHHHhhhhhcc-CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceee
Q 009673 103 KSLELIASE--N-----FTSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNV 172 (529)
Q Consensus 103 ~~i~L~ase--n-----~~~~~V~eal~~~l~~~-y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V 172 (529)
+.|+|..+. + ++++.|.+++...+.+. ...+|. ......++++...+++...+|. +++++ +.+
T Consensus 31 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~------~~~g~~~lr~~la~~~~~~~~~~~~~~~v-~~~ 103 (412)
T 1ajs_A 31 RKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYL------PILGLAEFRTCASRLALGDDSPALQEKRV-GGV 103 (412)
T ss_dssp TCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCC------CTTCCHHHHHHHHHHHHCTTCHHHHTTCE-EEE
T ss_pred CceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCC------CCCCCHHHHHHHHHHHhcCCCCccCCCcE-EEE
Confidence 567887665 1 35689999998766221 112231 1122245553333333322222 33321 111
Q ss_pred ecCChHHHHHHHH--HhhcCCC-----CEEEEcCCCCCccccccccccccccccccceEE-EEEcccCC-CCCCCCHHHH
Q 009673 173 QPLSGSPANFEVY--TAILKPH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE-SMPYRLDE-STGLVDYDML 243 (529)
Q Consensus 173 ~~~sGs~A~~~~l--~all~pG-----D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~-~v~~~v~~-~~~~iD~d~l 243 (529)
+..+|++|+..++ .++++|| |+|++++|.|.++.. .+...|. + ++.+++++ +++.+|++++
T Consensus 104 ~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~d~~~l 173 (412)
T 1ajs_A 104 QSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNG--------VFTTAGF--KDIRSYRYWDTEKRGLDLQGF 173 (412)
T ss_dssp EEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHH--------HHHHTTC--SCEEEEECEETTTTEECHHHH
T ss_pred ECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHH--------HHHHcCC--ceeEEEeeecCCCCccCHHHH
Confidence 2344559999885 3557899 999999998765421 2334454 4 45555532 4578999999
Q ss_pred HHHhhhc--CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccc--ccCCC---CC---cccEE
Q 009673 244 EKTAILF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS--VVADP---FK---YCDVV 308 (529)
Q Consensus 244 e~~i~~~--~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~--~~~~~---~~---~aDiv 308 (529)
++.+++. ++++|+++.++||+ .. ++++|.++|++||++||+|++|. ++...+ ....+ +. ..+++
T Consensus 174 ~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~~~~i~ 252 (412)
T 1ajs_A 174 LSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQ-GFASGNLEKDAWAIRYFVSEGFELFC 252 (412)
T ss_dssp HHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT-TTTTSCHHHHTHHHHHHHHTTCCEEE
T ss_pred HHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc-cccCCcccccchHHHHHhccCCcEEE
Confidence 9998764 45677788888886 33 46789999999999999999843 433322 00001 11 12388
Q ss_pred Eecccccc--cCCCCeEEEe---eCCCcchhH----HHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-----CchHHH
Q 009673 309 TTTTHKSL--RGPRGGMIFF---KKDPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-----SPEFKV 374 (529)
Q Consensus 309 ~~S~hK~l--~GprgG~i~~---~~~~~~~~~----l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-----~~~~~~ 374 (529)
+.|+||++ +|.|.|++++ ++ + +.+.+........ ++++....+++..+|+... ....++
T Consensus 253 ~~s~sK~~~~~G~riG~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 325 (412)
T 1ajs_A 253 AQSFSKNFGLYNERVGNLTVVAKEP------DSILRVLSQMQKIVRVTW-SNPPAQGARIVARTLSDPELFHEWTGNVKT 325 (412)
T ss_dssp EEECTTTSCCGGGCEEEEEEECSSH------HHHHHHHHHHHHHHHTTT-SSCCSHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred EEecccccCCCCcceEEEEEecCCH------HHHHHHHHHHHHHHhccc-CCCChHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 99999987 3677899998 54 4 3333333111112 2222233334444555321 123467
Q ss_pred HHHHHHHHHHHHHHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEE
Q 009673 375 YQNKVVSNCRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIR 450 (529)
Q Consensus 375 ~~~~i~~~a~~l~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iR 450 (529)
..+++.++++.+.+.|++.+ +.+..+. .+.+.|+++ +.+.+..+|+++||.+. | ++|
T Consensus 326 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~l~~~gv~v~----~---------~~R 386 (412)
T 1ajs_A 326 MADRILSMRSELRARLEALKTPGTWNHITDQ-IGMFSFTGL-----NPKQVEYLINQKHIYLL----P---------SGR 386 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSSCCHHHHHC-CSSEEECCC-----CHHHHHHHHHTTCEECC----T---------TSE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCeeEEcCC-CceEEEeCC-----CHHHHHHHHHhCCEEec----C---------CcE
Confidence 78888899999999998865 6554432 234445443 35667788889999983 2 269
Q ss_pred EccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 451 IGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 451 ig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
|++.. .++++++++++.|+++++
T Consensus 387 is~~~-----~~~~~i~~~~~~l~~~l~ 409 (412)
T 1ajs_A 387 INMCG-----LTTKNLDYVATSIHEAVT 409 (412)
T ss_dssp EEGGG-----CCTTTHHHHHHHHHHHHH
T ss_pred EEeee-----CCHHHHHHHHHHHHHHHH
Confidence 98653 347999999999988875
No 183
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.86 E-value=1.3e-20 Score=197.88 Aligned_cols=289 Identities=13% Similarity=0.061 Sum_probs=183.4
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+++| +++++++|.+. .|.++||++|+..++.++++|||+|++.++.|++.+.... ..+...|
T Consensus 80 ~~p~~~~le----~~lA~l~g~~~-----~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~----~~l~~~G 146 (415)
T 2fq6_A 80 GTLTHFSLQ----QAMCELEGGAG-----CVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCS----KILSKLG 146 (415)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHH----HTGGGGT
T ss_pred CCchHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHH----HHHHHcC
Confidence 456666666 67888999863 3556899999999999999999999999998876542110 0112234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHH--hCCEEEEecccccccccccc
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASV 297 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~--~g~~livD~ah~~Gli~~~~ 297 (529)
. ++..++. .|+++|++++++ ++|+|++.+++||+ ..|+++|+++|++ +|+++++|++|..+..
T Consensus 147 ~--~v~~v~~------~d~~~le~ai~~-~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~---- 213 (415)
T 2fq6_A 147 V--TTSWFDP------LIGADIVKHLQP-NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVL---- 213 (415)
T ss_dssp C--EEEEECT------TCGGGGGGGCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTS----
T ss_pred c--EEEEECC------CCHHHHHHhhcc-CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCccccc----
Confidence 3 5555543 278999999987 79999999888886 7899999999999 9999999999876532
Q ss_pred cCCCCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCchH
Q 009673 298 VADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (529)
Q Consensus 298 ~~~~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~ 372 (529)
..|+. ++|++++|+||++.|+. +|++++++ ++.+.+..... .+. .......+.+..+++ .+
T Consensus 214 -~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~------~~~~~l~~~~~~~G~--~~~~~~a~~~~~~l~-----~l 279 (415)
T 2fq6_A 214 -FKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNA------RCWEQLRENAYLMGQ--MVDADTAYITSRGLR-----TL 279 (415)
T ss_dssp -SCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECT------TTHHHHHHHHHHTTC--CCCHHHHHHHHHHHH-----HH
T ss_pred -CCccccCCeEEEEeCccccCCCCCceEEEEEeCH------HHHHHHHHHHHhcCC--CCCHHHHHHHHhhhh-----HH
Confidence 12333 68999999999997654 69999887 34444432211 121 111111111112232 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CcE-EecCC---------------CCCceEEEccCCCCCcHHHHHHhHhc---CCeEE
Q 009673 373 KVYQNKVVSNCRALASRLVEL-GYK-LVSGG---------------SDNHLVLVDLRPMGIDGARVEKILDM---ASITL 432 (529)
Q Consensus 373 ~~~~~~i~~~a~~l~~~L~~~-G~~-v~~~g---------------t~~~~~~v~~~~~~i~~~~~~~~L~~---~GI~v 432 (529)
..+.++..+|++.+.+.|.+. ++. +..++ ....++.+.+.. +.+..+..++|+. .+|.+
T Consensus 280 ~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g-~~~~~~~~~~l~~l~~~~~a~ 358 (415)
T 2fq6_A 280 GVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKK-KLNNEELANYLDNFSLFSMAY 358 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS-CCCHHHHHHHHTTCSSCEECS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC-CCCHHHHHHHHHhCCcCeEec
Confidence 456677888999999999874 333 21221 123445555542 1123344555544 44555
Q ss_pred cCCCC--------CCCC--------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 433 NKNSV--------PGDK--------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 433 ~~~~~--------Pg~~--------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
+.+.. |+.. -....+.||||+...++ +++++.+.++|++
T Consensus 359 s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~----~d~i~~l~~al~~ 413 (415)
T 2fq6_A 359 SWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDV----DDLIADLDAGFAR 413 (415)
T ss_dssp CCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCH----HHHHHHHHHHHHT
T ss_pred cCCCCceeEEecCCCccccccchhhcCCCCCEEEEEecCCCH----HHHHHHHHHHHHh
Confidence 43311 2110 01124689999875443 6777777777653
No 184
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.85 E-value=2e-20 Score=194.25 Aligned_cols=309 Identities=14% Similarity=0.101 Sum_probs=196.2
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc--C
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--K 190 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--~ 190 (529)
+.++.|++++...+.. +..+ . +.| ..+...+ .++++++++|++.++ .+..++|++|+..++.++. .
T Consensus 61 ~~~~~v~~a~~~~~~~-~~~~--~-~~~-~~~~~~~----l~~~la~~~~~~~~~---v~~~~gg~~a~~~al~~~~~~~ 128 (395)
T 1vef_A 61 HGNPEVVEAVKRQAET-LMAM--P-QTL-PTPMRGE----FYRTLTAILPPELNR---VFPVNSGTEANEAALKFARAHT 128 (395)
T ss_dssp BTCHHHHHHHHHHHHH-CCCC--C-TTS-CCHHHHH----HHHHHHHTSCTTEEE---EEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh-CCCC--c-ccc-CCHHHHH----HHHHHHHhcCCCcCE---EEEcCcHHHHHHHHHHHHHHHh
Confidence 4789999999888753 2211 1 122 2233333 447888889876542 2334566699999988764 6
Q ss_pred CCCEEEEcCCCCCccccccccccccccccccce-----E-----EEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 009673 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (529)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-----~-----~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s 260 (529)
+||+|+++++.+.+.... .+...|.. + +...++ ..|+++|++.+++ ++++|+++.+
T Consensus 129 ~~~~vi~~~~~y~~~~~~-------~~~~~g~~~~~~~~~p~~~~~~~~~------~~d~~~l~~~i~~-~~~~v~~~~~ 194 (395)
T 1vef_A 129 GRKKFVAAMRGFSGRTMG-------SLSVTWEPKYREPFLPLVEPVEFIP------YNDVEALKRAVDE-ETAAVILEPV 194 (395)
T ss_dssp SCCEEEEETTCCCCSSHH-------HHHTCCCHHHHGGGCSCSSCEEEEC------TTCHHHHHHHCCT-TEEEEEECSE
T ss_pred CCCeEEEEcCCcCCCchh-------hhhhcCCcccccccCCCCCCeeEeC------CCcHHHHHHHhcc-CEEEEEEeCc
Confidence 899999998876433211 11122221 0 011111 2589999999986 7899988765
Q ss_pred CCCC--CCC----HHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-cccEEEeccccccc-CCCCeEEEeeCC
Q 009673 261 AYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSLR-GPRGGMIFFKKD 329 (529)
Q Consensus 261 ~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~aDiv~~S~hK~l~-GprgG~i~~~~~ 329 (529)
++++ ..+ +++|.++|++||++||+|++|. |+...+. ..++ . ..|++ |+||++. |+|.|++++++
T Consensus 195 ~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~-~~~~~g~-~~~~~~~~~~~d~~--s~sK~~~~g~~~G~~~~~~- 269 (395)
T 1vef_A 195 QGEGGVRPATPEFLRAAREITQEKGALLILDEIQT-GMGRTGK-RFAFEHFGIVPDIL--TLAKALGGGVPLGVAVMRE- 269 (395)
T ss_dssp ETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSS-SSTHHHHTCCCSEE--EECGGGGTTSSCEEEEEEH-
T ss_pred cCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCCc-hhHhhhcCCCCCEE--EEcccccCCCceEEEEehH-
Confidence 5543 456 9999999999999999999987 5432221 1111 1 46877 6799985 46679999988
Q ss_pred CcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCcEEec-CCCCCceEE
Q 009673 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-GGSDNHLVL 408 (529)
Q Consensus 330 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G~~v~~-~gt~~~~~~ 408 (529)
++.+.+......... +++....++...+++.... .++.+++.++++++.+.|++.+.+++. .....++++
T Consensus 270 -----~~~~~l~~~~~~~~~-~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~ 340 (395)
T 1vef_A 270 -----EVARSMPKGGHGTTF-GGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVG 340 (395)
T ss_dssp -----HHHHTSCTTSSCCSS-TTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEE
T ss_pred -----HHHhhhccCCcCCCc-CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEE
Confidence 677766542222222 2344444444556665432 345677888899999999886542111 001235667
Q ss_pred EccCCCCCcHHHHHHhHh-cCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 409 VDLRPMGIDGARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 409 v~~~~~~i~~~~~~~~L~-~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
+++.. +..++.+.|. ++||.+.. + .++.+||+++.. .+++|++++++.|++++
T Consensus 341 ~~~~~---~~~~l~~~l~~~~gi~v~~----~-----~~~~iRi~~~~~----~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 341 LELKE---KAAPYIARLEKEHRVLALQ----A-----GPTVIRFLPPLV----IEKEDLERVVEAVRAVL 394 (395)
T ss_dssp EEESS---CSHHHHHHHHHHHCEECEE----S-----STTEEEECCCTT----CCHHHHHHHHHHHHHHH
T ss_pred EEEcC---hHHHHHHHHHHHCCeEEec----C-----CCCEEEEeCCCC----CCHHHHHHHHHHHHHHh
Confidence 77653 2466777776 89999853 2 257899987643 45899999999998765
No 185
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.85 E-value=5.6e-20 Score=191.57 Aligned_cols=255 Identities=20% Similarity=0.193 Sum_probs=168.2
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..++++ +++++++|.+. .+.++||++|+..++.+++++||+|++.++.|++.+.... ......|
T Consensus 64 ~~~~~~~l~----~~la~~~g~~~-----~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~----~~~~~~g 130 (392)
T 3qhx_A 64 GNPTRTALE----AALAAVEDAAF-----GRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLID----KVFTGWN 130 (392)
T ss_dssp CCHHHHHHH----HHHHHHTTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHH----HTGGGGT
T ss_pred CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHH----HHHHhcC
Confidence 345455555 77889999873 3567899999999999999999999999998865432110 0112234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. +++.++++ |++++++++++ ++++|++..++||+ ..|+++|+++|+++|+++|+|++|..+.. .
T Consensus 131 ~--~~~~v~~~------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~-----~ 196 (392)
T 3qhx_A 131 V--EYTPVALA------DLDAVRAAIRP-TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPAL-----Q 196 (392)
T ss_dssp C--EEEEECTT------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTT-----C
T ss_pred c--EEEEeCCC------CHHHHHHhhCC-CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 3 66665542 89999999987 89999999888886 78999999999999999999999865422 1
Q ss_pred CCCC-cccEEEecccccccCC---CCeEEEeeCCCcchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (529)
.++. ++|+++.|+||++.|+ ++|+++.+++ ++.+.+..... .+...+ .....+ ++..+. .+..
T Consensus 197 ~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~-----~~~~~l~~~~~~~g~~~~-~~~~~~----~~~~l~--~l~~ 264 (392)
T 3qhx_A 197 QPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDE-----ELDQSFAFLQNGAGAVPG-PFDAYL----TMRGLK--TLVL 264 (392)
T ss_dssp CGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCH-----HHHHHHHHHHHHHCCCCC-HHHHHH----HHHHHT--THHH
T ss_pred ChHHhCCcEEEEcCccccCCCCCceEEEEEECcH-----HHHHHHHHHHHhcCCCCC-HHHHHH----HHhhhh--HHHH
Confidence 2333 6899999999999654 5899999853 56555543221 111122 121111 222221 2456
Q ss_pred HHHHHHHHHHHHHHHHHhc-CcEEe-cCCC---------------CCceEEEccCCCCCcHHHHHHhHhcCCeEEcCC
Q 009673 375 YQNKVVSNCRALASRLVEL-GYKLV-SGGS---------------DNHLVLVDLRPMGIDGARVEKILDMASITLNKN 435 (529)
Q Consensus 375 ~~~~i~~~a~~l~~~L~~~-G~~v~-~~gt---------------~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~ 435 (529)
+.++..++++.+.+.|.+. ++..+ .++- ...++.+.+.......+.+...|+..+|.++.+
T Consensus 265 ~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G 342 (392)
T 3qhx_A 265 RMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLG 342 (392)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCC
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCC
Confidence 6788889999999999873 44322 2211 123455566421123445666677677776544
No 186
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.85 E-value=5e-20 Score=193.32 Aligned_cols=289 Identities=18% Similarity=0.170 Sum_probs=186.2
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+++| +++++++|.+. .+.++||++|+..++.++++|||+|+++++.|++...... ......|
T Consensus 79 ~~p~~~~l~----~~la~~~g~~~-----~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~g 145 (414)
T 3ndn_A 79 GNPTVSVFE----ERLRLIEGAPA-----AFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCS----EILPRWG 145 (414)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHH----THHHHTT
T ss_pred CChHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHH----HHHHHcC
Confidence 345556666 77888999753 3567899999999999999999999999998866432110 0011244
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. +++.++.+ |+++|++++++ ++++|++++++||+ ..|+++|+++|+++|++||+|++|..+.. .
T Consensus 146 ~--~~~~v~~~------d~~~l~~ai~~-~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~-----~ 211 (414)
T 3ndn_A 146 V--QTVFVDGD------DLSQWERALSV-PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLL-----Q 211 (414)
T ss_dssp C--EEEEECTT------CHHHHHHHTSS-CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHH-----C
T ss_pred c--EEEEeCCC------CHHHHHHhcCC-CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 4 66665542 89999999987 89999999998887 78999999999999999999999876543 2
Q ss_pred CCCC-cccEEEecccccccC---CCCeEEEeeCCCcchhHHHh-hhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELES-AINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~G---prgG~i~~~~~~~~~~~l~~-~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (529)
.++. ++|+++.|+||++.| +++|++++++ +... .+..... ...++.. ..++ +.+++.+ ..+..
T Consensus 212 ~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~------~~~~~~l~~~~~-~~g~~~~--~~~a-~~~~~~l--~~l~~ 279 (414)
T 3ndn_A 212 QGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDR------EYIDGPVQKLMR-HTGPAMS--AFNA-WVLLKGL--ETLAI 279 (414)
T ss_dssp CCGGGTCSEEEEETTTTTTCSSCCCCEEEEECH------HHHTTHHHHHHH-HHCCCCC--HHHH-HHHHHHG--GGHHH
T ss_pred CchhcCCCeEeccCCccccCCCCceEEEEEECH------HHHHHHHHHHHH-HcCCCCC--HHHH-HHHHHHH--HHHHH
Confidence 2333 689999999999965 5689999987 3333 3332110 0011111 1111 1223322 34566
Q ss_pred HHHHHHHHHHHHHHHHHhc-CcEEe-cCCC---------------CCceEEEccCCC----CCcHHHHHHhHhcCCeEEc
Q 009673 375 YQNKVVSNCRALASRLVEL-GYKLV-SGGS---------------DNHLVLVDLRPM----GIDGARVEKILDMASITLN 433 (529)
Q Consensus 375 ~~~~i~~~a~~l~~~L~~~-G~~v~-~~gt---------------~~~~~~v~~~~~----~i~~~~~~~~L~~~GI~v~ 433 (529)
+.++..+|++.+.+.|++. ++..+ .++- ...++++.+... ..+...+.+.|+..++.++
T Consensus 280 r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s 359 (414)
T 3ndn_A 280 RVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNN 359 (414)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSC
T ss_pred HHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCC
Confidence 7788899999999999873 44322 2221 123566666421 1123445556666666665
Q ss_pred CCCC------CCCC------------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 434 KNSV------PGDK------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 434 ~~~~------Pg~~------------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
.+.. |... ....++.|||++. .|+.+.+.+.|.+++
T Consensus 360 ~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG--------~e~~~dli~dl~~al 413 (414)
T 3ndn_A 360 LGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVG--------LEDTDDLIADIDRAL 413 (414)
T ss_dssp CSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECC--------SSCHHHHHHHHHHHH
T ss_pred CCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeC--------cCCHHHHHHHHHHhh
Confidence 4321 1110 0123567999864 266777777776654
No 187
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.85 E-value=3.7e-20 Score=195.08 Aligned_cols=295 Identities=16% Similarity=0.119 Sum_probs=184.8
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCcccccccccccccccccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
+++..+++| +++++++|.+. .|.++||++|+..++.++++|||+|++.++.|++...... ..+...|
T Consensus 80 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~G 146 (430)
T 3ri6_A 80 SNPTVEDLE----QRLKNLTGALG-----VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQ----KTLPSFG 146 (430)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHH----THHHHTT
T ss_pred CCHHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHH----HHHHHcC
Confidence 456667776 77888999864 3566899999999999999999999999998876532110 0122345
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~ 299 (529)
. +++.++.+ |+++|++++++ ++++|++.+++||+ ..|+++|+++|+++|++||+|++|..+.. .
T Consensus 147 ~--~~~~v~~~------d~~~l~~ai~~-~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~-----~ 212 (430)
T 3ri6_A 147 I--EVRFVDVM------DSLAVEHACDE-TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYL-----L 212 (430)
T ss_dssp C--EEEEECTT------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTT-----C
T ss_pred C--EEEEeCCC------CHHHHHHhhCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 4 66665542 89999999987 89999999888886 78999999999999999999999876643 2
Q ss_pred CCCC-cccEEEecccccccCC---CCeEEEeeCCCcc-----hhH---------HHhhhcccccCCCCCCChHHHHHHHH
Q 009673 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVL-----GVE---------LESAINNAVFPGLQGGPHNHTIGGLA 361 (529)
Q Consensus 300 ~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~~~-----~~~---------l~~~i~~~~~p~~~g~p~~~~iaala 361 (529)
.+.. ++|+++.|+||++.|+ .||+++.+.+..+ ..+ +..++...... ..|+......+.+
T Consensus 213 ~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~-~~g~~~~~~~a~l- 290 (430)
T 3ri6_A 213 EAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQ-NLGPSLSPHNAYL- 290 (430)
T ss_dssp CGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHH-HHCCCCCHHHHHH-
T ss_pred ChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHH-hcCCCCCHHHHHH-
Confidence 2333 6899999999999876 6788886543111 001 11111111000 0121111111211
Q ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHHh-cCcEE-ecCCCC--------------Cc-eEEEccCCCCCcHHHHHHh
Q 009673 362 VCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKL-VSGGSD--------------NH-LVLVDLRPMGIDGARVEKI 424 (529)
Q Consensus 362 ~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~-~G~~v-~~~gt~--------------~~-~~~v~~~~~~i~~~~~~~~ 424 (529)
+++.+ ..+..+.++..+|++.+.+.|++ +++.. ..++-. .. ++++.+. ...+...+.+.
T Consensus 291 -~l~~l--~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~-~~~~~~~~~~~ 366 (430)
T 3ri6_A 291 -QSLGL--ETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELE-SKEASYRFMDA 366 (430)
T ss_dssp -HHHHH--HHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECS-SHHHHHHHHHH
T ss_pred -HHhhh--hhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEEC-CHHHHHHHHHh
Confidence 22222 23456678888999999999987 46653 333311 12 6667765 11122334444
Q ss_pred HhcCCeEEcCCCC------CCCC-----C-------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHH
Q 009673 425 LDMASITLNKNSV------PGDK-----S-------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 477 (529)
Q Consensus 425 L~~~GI~v~~~~~------Pg~~-----~-------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~ 477 (529)
|+..++.++.+.+ |... + ...++.|||++. .|+.+.+.+.|++++
T Consensus 367 l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG--------~E~~~dl~~dl~~al 429 (430)
T 3ri6_A 367 LKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVG--------IEEIEDLKEDILQAL 429 (430)
T ss_dssp CSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECC--------SSCHHHHHHHHHHHH
T ss_pred CCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHhh
Confidence 4445555543221 1000 0 123467999864 367777777777665
No 188
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.85 E-value=5.4e-21 Score=198.38 Aligned_cols=329 Identities=15% Similarity=0.157 Sum_probs=196.2
Q ss_pred cceeEecCC---C----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--CCCCCCceee-
Q 009673 103 KSLELIASE---N----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNV- 172 (529)
Q Consensus 103 ~~i~L~ase---n----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g--~~~~~~~~~V- 172 (529)
+.|+|..++ + ++++.+.+++...+.+....+|.. .....++++...+++....+ +++++ +.+
T Consensus 27 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr~~la~~~~~~~~~~~~~~~--v~~~ 98 (396)
T 2q7w_A 27 GKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLG------IDGIPEFGRCTQELLFGKGSALINDKR--ARTA 98 (396)
T ss_dssp -CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCC------TTCCHHHHHHHHHHHHCTTCHHHHTTC--EEEE
T ss_pred CceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCC------CCCCHHHHHHHHHHHhcCCCCcccccc--EEEE
Confidence 467887665 1 456999999987664322223321 11123455333333322212 12332 211
Q ss_pred ecCChHHHHHHHHHhh--cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhh
Q 009673 173 QPLSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAIL 249 (529)
Q Consensus 173 ~~~sGs~A~~~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~i~~ 249 (529)
+..+|++|+..++.++ +.|||+|++++|.|.++.. .+...|. +++.+++++ +++.+|++++++.+++
T Consensus 99 ~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~ 168 (396)
T 2q7w_A 99 QTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKS--------VFNSAGL--EVREYAYYDAENHTLDFDALINSLNE 168 (396)
T ss_dssp EESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHH--------HHHHTTC--EEEEEECEETTTTEECHHHHHHHHTT
T ss_pred ecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHH--------HHHHcCC--ceEEEecccCCCCCcCHHHHHHHHHh
Confidence 2445559999888665 4799999999998765421 2334454 555666532 3578999999999975
Q ss_pred c--CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccc--cc-C-CCCC---cccEEEeccccc
Q 009673 250 F--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS--VV-A-DPFK---YCDVVTTTTHKS 315 (529)
Q Consensus 250 ~--~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~--~~-~-~~~~---~aDiv~~S~hK~ 315 (529)
. ++++++++.++||+ .. ++++|.++|+++|+++|+|++|. ++...+ .. + ..+. ..+++++|+||+
T Consensus 169 ~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 247 (396)
T 2q7w_A 169 AQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQ-GFARGLEEDAEGLRAFAAMHKELIVASSYSXN 247 (396)
T ss_dssp CCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT-TSSSCHHHHTHHHHHHHHHCSCEEEEEECTTT
T ss_pred CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccc-cccCCccchhHHHHHHHhcCCcEEEEEecccc
Confidence 3 35677788888887 33 46789999999999999999964 333221 00 0 0011 134788999999
Q ss_pred c--cCCCCeEEEe--eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHh-----cCchHHHHHHHHHHHHHHH
Q 009673 316 L--RGPRGGMIFF--KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA-----QSPEFKVYQNKVVSNCRAL 386 (529)
Q Consensus 316 l--~GprgG~i~~--~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~-----~~~~~~~~~~~i~~~a~~l 386 (529)
+ +|+|.|++++ +++. ...++.+.+........ ++++....+++..+++.. .....++..+++.++++.+
T Consensus 248 ~~~~G~riG~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l 325 (396)
T 2q7w_A 248 FGLYNERVGACTLVAADSE-TVDRAFSQMKAAIRANY-SNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLF 325 (396)
T ss_dssp TTCGGGCCEEEEEECSSHH-HHHHHHHHHHHHHHTTT-SSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHH
T ss_pred ccccccccceEEEEcCCHH-HHHHHHHHHHHHHhhcc-CCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7 5788899987 2210 00023333332111222 232333333333344321 0123456677788889999
Q ss_pred HHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673 387 ASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 462 (529)
Q Consensus 387 ~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~ 462 (529)
.+.|++.| +.+..+. .+.+.|+++ +.+.+...|+++||.+. | ++||++... +
T Consensus 326 ~~~L~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~l~~~gv~v~----~---------~~Ris~~~~-----~ 381 (396)
T 2q7w_A 326 VNTLQEKGANRDFSFIIKQ-NGMFSFSGL-----TKEQVLRLREEFGVYAV----A---------SGRVNVAGM-----T 381 (396)
T ss_dssp HHHHHHTTCCSCCTHHHHC-CSSEEECCC-----CHHHHHHHHHHHCEECC----T---------TCEEEGGGC-----C
T ss_pred HHHHHhcCCCCCcceecCC-CceEEEecC-----CHHHHHHHHHhcCeeec----C---------CceEEEeec-----C
Confidence 99998876 6554432 234445444 34667888889999983 2 369987532 4
Q ss_pred HHHHHHHHHHHHHH
Q 009673 463 EKEFVAIADFIHEG 476 (529)
Q Consensus 463 ~~d~~~la~~i~~~ 476 (529)
++|++++++.|+++
T Consensus 382 ~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 382 PDNMAPLCEAIVAV 395 (396)
T ss_dssp TTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 79999999998765
No 189
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.84 E-value=3.6e-19 Score=188.22 Aligned_cols=322 Identities=15% Similarity=0.092 Sum_probs=200.1
Q ss_pred ceeEecCCC--C---CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673 104 SLELIASEN--F---TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (529)
Q Consensus 104 ~i~L~asen--~---~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs 178 (529)
.|++..+.+ . .+|.|.+|+...+.. +.. .. +.| ..+...+++ +++++++|.+. .+..+||+
T Consensus 78 ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~-~~~--~~-~~~-~~~~~~~l~----~~la~~~g~~~-----v~~~~sGs 143 (439)
T 2oat_A 78 YFDFLSSYSAVNQGHCHPKIVNALKSQVDK-LTL--TS-RAF-YNNVLGEYE----EYITKLFNYHK-----VLPMNTGV 143 (439)
T ss_dssp EEESSGGGGTTTTCBTCHHHHHHHHHHHTT-CSC--CC-TTS-EESSHHHHH----HHHHHHHTCSE-----EEEESSHH
T ss_pred EEEccCCcccccCCCCCHHHHHHHHHHHHh-cCc--cc-Ccc-CCHHHHHHH----HHHHHhcCCCE-----EEEeCCHH
Confidence 466655432 2 679999999887743 221 11 112 123344444 66777887532 24457788
Q ss_pred HHHHHHHHhhc---------CCC-CEEEEcCCCCCccccccccccccccccccc----------eEEEEEcccCCCCCCC
Q 009673 179 PANFEVYTAIL---------KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI----------YFESMPYRLDESTGLV 238 (529)
Q Consensus 179 ~A~~~~l~all---------~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~----------~~~~v~~~v~~~~~~i 238 (529)
+|+..++.++. .|| |+|++.++.+.+.... .+...+. ...++.++. .
T Consensus 144 eA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~p~~~~v~~~~~------~ 210 (439)
T 2oat_A 144 EAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLS-------AISSSTDPTSYDGFGPFMPGFDIIPY------N 210 (439)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHH-------HHTTCCCHHHHTTSCSCCTTEEEECS------S
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHh-------HhhcCCChhcccCCCCCCCCeEEeCC------C
Confidence 99999888764 467 9999998876443211 1111110 012223322 3
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCC-C-CC----CHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEE
Q 009673 239 DYDMLEKTAILFRPKLIIAGASAYP-R-DF----DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVT 309 (529)
Q Consensus 239 D~d~le~~i~~~~pklIi~~~s~~p-~-~~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~ 309 (529)
|+++|++.++..++++|+++..+++ + .. ++++|+++|++||++||+|++| .|+...+.. . ..+. ..|++
T Consensus 211 d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~-~g~g~~g~~~~~~~~~~~~Di~- 288 (439)
T 2oat_A 211 DLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQ-TGLARTGRWLAVDYENVRPDIV- 288 (439)
T ss_dssp CHHHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTT-TTTTTTSSSSGGGGGTCCCSEE-
T ss_pred CHHHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCcchhHHHhCCCCcEE-
Confidence 8999999995336788888744332 2 33 7999999999999999999998 554322211 0 0111 36876
Q ss_pred ecccccccC--CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 009673 310 TTTHKSLRG--PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA 387 (529)
Q Consensus 310 ~S~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~ 387 (529)
|++|+++| .++|++++++ ++.+.+.........+++. ...++..++++.+..+ ++.+++.++++++.
T Consensus 289 -t~sK~l~~G~~~~G~v~~~~------~~~~~l~~~~~~~t~~~~~-~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~ 357 (439)
T 2oat_A 289 -LLGKALSGGLYPVSAVLCDD------DIMLTIKPGEHGSTYGGNP-LGCRVAIAALEVLEEE---NLAENADKLGIILR 357 (439)
T ss_dssp -EECGGGGTTSSCCEEEEECH------HHHTTSCTTSSCCSSTTCH-HHHHHHHHHHHHHHHT---THHHHHHHHHHHHH
T ss_pred -EecccccCCCCCeEEEEECH------HHHhccCCCCcccCCCcCH-HHHHHHHHHHHHHhhh---hHHHHHHHHHHHHH
Confidence 67799854 5899999987 6777665432223333333 3344444467655322 45677888899999
Q ss_pred HHHHhcCcEEecC-CCCCceEEEccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHH
Q 009673 388 SRLVELGYKLVSG-GSDNHLVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKE 465 (529)
Q Consensus 388 ~~L~~~G~~v~~~-gt~~~~~~v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d 465 (529)
+.|++.+++++.. .....++++++... +.+..++.+.|.+.||.+.. + .++.+||+.+.. ++++|
T Consensus 358 ~~L~~l~~~~~~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~----~-----~~~~iRi~~~~~----~t~e~ 424 (439)
T 2oat_A 358 NELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKP----T-----HGDIIRFAPPLV----IKEDE 424 (439)
T ss_dssp HHHTTSCTTTEEEEEEETTEEEEEECCCSSCCHHHHHHHHHHTTEECCB----S-----SSSEEEECCCTT----CCHHH
T ss_pred HHHHHhcCCCcEEEEeeeeEEEEEEecCccHHHHHHHHHHHHCCeEEec----C-----CCCEEEEECccC----CCHHH
Confidence 9998765543210 01234566666432 13466788888788999853 1 257899986643 56899
Q ss_pred HHHHHHHHHHHHH
Q 009673 466 FVAIADFIHEGVE 478 (529)
Q Consensus 466 ~~~la~~i~~~~~ 478 (529)
++++++.|++++.
T Consensus 425 i~~~l~~l~~~l~ 437 (439)
T 2oat_A 425 LRESIEIINKTIL 437 (439)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988764
No 190
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.84 E-value=2.8e-19 Score=186.10 Aligned_cols=319 Identities=17% Similarity=0.104 Sum_probs=199.5
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--- 190 (529)
.+|.|.+++...+...+. .+.. + ..+...++ ++++++++|.+. .+..++|++|+..++.+++.
T Consensus 56 ~~p~v~~a~~~~~~~~~~---~~~~-~-~~~~~~~l----~~~la~~~~~~~-----v~~~~gg~~a~~~al~~~~~~~~ 121 (406)
T 4adb_A 56 AHPELREALNEQASKFWH---TGNG-Y-TNEPVLRL----AKKLIDATFADR-----VFFCNSGAEANEAALKLARKFAH 121 (406)
T ss_dssp TCHHHHHHHHHHHTTCSC---CCTT-S-CCHHHHHH----HHHHHHHSSCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccc---ccCC-c-CCHHHHHH----HHHHHhhCCCCe-----EEEeCcHHHHHHHHHHHHHHHHH
Confidence 488999999887754221 1111 2 22333333 478889998762 24456777999999988865
Q ss_pred ----CC-CEEEEcCCCCCccccccccccccccc---cccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 009673 191 ----PH-DRIMGLDLPHGGHLSHGFMTPKRRVS---GTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (529)
Q Consensus 191 ----pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~---~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~ 262 (529)
+| |+|++.++.+.+.............. +.....+...++ ..|+++|++++++ ++++|+++ |+|
T Consensus 122 ~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~~~v~~~-p~n 193 (406)
T 4adb_A 122 DRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAA------YNDINSASALIDD-STCAVIVE-PIQ 193 (406)
T ss_dssp HHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEEC------TTCHHHHHTTCST-TEEEEEEC-SEE
T ss_pred hcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeC------CCcHHHHHHHhcC-CeEEEEEe-CCc
Confidence 66 99999998875542111000000000 000000112222 2489999999986 89999998 777
Q ss_pred CC--C-----CCHHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEecccccc-cCCCCeEEEeeCCCc
Q 009673 263 PR--D-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPV 331 (529)
Q Consensus 263 p~--~-----~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l-~GprgG~i~~~~~~~ 331 (529)
|+ . .++++|.++|++||++||+|++|. |+...+... .... ..|+++ +||++ +|.|+|++++++
T Consensus 194 p~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~t--~sK~~~~G~r~G~~~~~~--- 267 (406)
T 4adb_A 194 GEGGVVPASNAFLQGLRELCNRHNALLIFDEVQT-GVGRTGELYAYMHYGVTPDLLT--TAKALGGGFPVGALLATE--- 267 (406)
T ss_dssp TTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEE--ECGGGGTTSCCEEEEECH---
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhHHHHhcCCCCCEEE--echhhcCCCCeEEEEEcH---
Confidence 74 2 268999999999999999999975 543322110 0011 357774 58998 566889999987
Q ss_pred chhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC--cEEecC-CCCCceEE
Q 009673 332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLVSG-GSDNHLVL 408 (529)
Q Consensus 332 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G--~~v~~~-gt~~~~~~ 408 (529)
++.+.+.........+. +....++...+++.+.. +++.+++.++++.+.+.|++.+ +.++.. .....+++
T Consensus 268 ---~~~~~~~~~~~~~~~~~-~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~ 340 (406)
T 4adb_A 268 ---ECARVMTVGTHGTTYGG-NPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIG 340 (406)
T ss_dssp ---HHHHTCCTTSSCCSSTT-CHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEE
T ss_pred ---HHHhhhccCCcCCCCCC-CHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEE
Confidence 78777765433333333 33444444456776543 5677888888999999887742 111111 01234555
Q ss_pred EccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 409 VDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 409 v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
+.+... ..+..++.+.|.+.||.+.. + .++.+||+.+.. .+++|++++++.|++++...
T Consensus 341 ~~~~~~~~~~~~~~~~~l~~~gi~v~~----~-----~~~~iRi~~~~~----~~~e~i~~~~~~l~~~l~~~ 400 (406)
T 4adb_A 341 CVLNADYAGQAKQISQEAAKAGVMVLI----A-----GGNVVRFAPALN----VSEEEVTTGLDRFAAACEHF 400 (406)
T ss_dssp EEECTTTTTCHHHHHHHHHHTTEECEE----S-----STTEEEECCCTT----CCHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCcHHHHHHHHHHHHHCCcEEee----c-----CCCeEEEECCCC----CCHHHHHHHHHHHHHHHHHH
Confidence 655431 12467788888888999853 2 257899976543 46899999999999988643
No 191
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.84 E-value=4e-19 Score=187.46 Aligned_cols=312 Identities=13% Similarity=0.092 Sum_probs=190.4
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---- 189 (529)
.+|.|.+|+...+.. +. +.. +.| ..+...+++ +++++++|.+. .+..+||++|+..++.++.
T Consensus 82 ~~p~v~~ai~~~~~~-~~--~~~-~~~-~~~~~~~l~----~~la~~~g~~~-----v~~~~sGseA~~~al~~a~~~~~ 147 (433)
T 1z7d_A 82 CHPNILNAMINQAKN-LT--ICS-RAF-FSVPLGICE----RYLTNLLGYDK-----VLMMNTGAEANETAYKLCRKWGY 147 (433)
T ss_dssp TCHHHHHHHHHHHTT-CS--CCC-TTS-EEHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-CC--Ccc-CCc-CCHHHHHHH----HHHHhhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 679999999887743 22 111 112 223333333 67788888542 2445778899999888753
Q ss_pred -----CCC-CEEEEcCCCCCccccccccccccccccccc-----e-----EEEEEcccCCCCCCCCHHHHHHHhhhcCCc
Q 009673 190 -----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----Y-----FESMPYRLDESTGLVDYDMLEKTAILFRPK 253 (529)
Q Consensus 190 -----~pG-D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~-----~-----~~~v~~~v~~~~~~iD~d~le~~i~~~~pk 253 (529)
+|| |+|+++++.+.+.... .+...+. . ..++.++ ..|+++|+++++..+++
T Consensus 148 ~~~g~~~gr~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~p~~~~v~~~~------~~d~~~le~~l~~~~~~ 214 (433)
T 1z7d_A 148 EVKKIPENMAKIVVCKNNFSGRTLG-------CISASTTKKCTSNFGPFAPQFSKVP------YDDLEALEEELKDPNVC 214 (433)
T ss_dssp HTSCCCTTCCEEEEETTC---------------------------------CEEEEC------TTCHHHHHHHHTSTTEE
T ss_pred hccCCCCCCCeEEEEeCCcCCcchh-------hhcccCCccccccCCCCCCCeEEeC------CCCHHHHHHHhCCCCEE
Confidence 578 9999999876443211 1112221 0 0122222 23899999999433788
Q ss_pred EEEEcCCCCC-C-CC----CHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEeccccccc-C-CCCe
Q 009673 254 LIIAGASAYP-R-DF----DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR-G-PRGG 322 (529)
Q Consensus 254 lIi~~~s~~p-~-~~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l~-G-prgG 322 (529)
+|+++..+++ + .. ++++|+++|++||++||+|++|. |+...+.. . ..+. ..|++ |++|+++ | .|+|
T Consensus 215 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~g~~g~~~~~~~~~~~~di~--t~sK~l~~G~~~~G 291 (433)
T 1z7d_A 215 AFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-GLGRTGKLLCVHHYNVKPDVI--LLGKALSGGHYPIS 291 (433)
T ss_dssp EEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEE--EECGGGGTTSSCCE
T ss_pred EEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCcc-CCCcCCcchhhHhcCCCCCEE--EECccccCCCCCeE
Confidence 8888744332 2 23 79999999999999999999974 54322211 0 1111 36777 5679985 4 5899
Q ss_pred EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEec-
Q 009673 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS- 399 (529)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~- 399 (529)
++++++ ++.+.+......+..++ +....++..++++.+... ++.+++.++++++.+.|++. +++++.
T Consensus 292 ~v~~~~------~~~~~l~~~~~~~t~~~-~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 361 (433)
T 1z7d_A 292 AVLAND------DIMLVIKPGEHGSTYGG-NPLAASICVEALNVLINE---KLCENAEKLGGPFLENLKRELKDSKIVRD 361 (433)
T ss_dssp EEEECH------HHHTTCCTTCCCCTTTT-CHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred EEEECH------HHHhhhccccccccCCC-CHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 999987 67776654322222333 333344444466655322 45677788888898888774 553221
Q ss_pred -CCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 400 -GGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 400 -~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.+ ...++++++.....+...+.+.|.+.||.+.. + ..+.+||+.+.. .+++|++++++.|++++.
T Consensus 362 ~~~-~g~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~----~-----~~~~iRi~~~~~----~t~e~i~~~l~~l~~~l~ 427 (433)
T 1z7d_A 362 VRG-KGLLCAIEFKNELVNVLDICLKLKENGLITRD----V-----HDKTIRLTPPLC----ITKEQLDECTEIIVKTVK 427 (433)
T ss_dssp EEE-ETTEEEEEECTTTCCHHHHHHHHHHTTEECCE----E-----TTTEEEECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred EEe-eeeEEEEEEccChhHHHHHHHHHHHCCeEEec----C-----CCCEEEEECCcC----CCHHHHHHHHHHHHHHHH
Confidence 11 23456666653213466787888789999843 2 247899986643 468999999999998875
Q ss_pred H
Q 009673 479 I 479 (529)
Q Consensus 479 ~ 479 (529)
.
T Consensus 428 ~ 428 (433)
T 1z7d_A 428 F 428 (433)
T ss_dssp H
T ss_pred H
Confidence 3
No 192
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.84 E-value=5.3e-20 Score=195.54 Aligned_cols=327 Identities=17% Similarity=0.173 Sum_probs=195.0
Q ss_pred HHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCC----
Q 009673 116 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP---- 191 (529)
Q Consensus 116 ~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~p---- 191 (529)
++|++++...+... . ..|+..+...+++ +++++++|.+. .+.+++|++|+..++.++++|
T Consensus 53 ~~v~~a~~~~l~~~----~---~~y~~~~~~~~l~----~~la~~~~~~~-----v~~t~~gt~A~~~al~~~~~~~~~~ 116 (467)
T 2oqx_A 53 GAVTQSMQAAMMRG----D---EAYSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKREQE 116 (467)
T ss_dssp SCCCHHHHHHTTSC----C---CCSSSCHHHHHHH----HHHHHHHCCSE-----EEEEC--CCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccC----c---ceeccCchhHHHH----HHHHHHhCcCc-----EEEcCCcHHHHHHHHHHHhcccccc
Confidence 77888877665321 1 1244445455555 67888888742 244567779999999999888
Q ss_pred -C----CEEEEcCCCCCccccccccccccccccccceEEEEE------cccC---CCCCCCCHHHHHHHhhh---cCCcE
Q 009673 192 -H----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP------YRLD---ESTGLVDYDMLEKTAIL---FRPKL 254 (529)
Q Consensus 192 -G----D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~------~~v~---~~~~~iD~d~le~~i~~---~~pkl 254 (529)
| |+|+.. ..|+..+.. .....+. ..+. ++.+ +.++.+|+++|++++++ .++++
T Consensus 117 ~G~~~~d~Ii~~-~~h~~t~~~-------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~ 186 (467)
T 2oqx_A 117 KGLDRSKMVAFS-NYFFDTTQG-------HSQINGC--TVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPY 186 (467)
T ss_dssp HCCCTTTCEEEE-SSCCHHHHH-------HHHHTTC--EEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCC
T ss_pred CCCCccceEEec-ccccccchh-------hhhccCc--ceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeE
Confidence 9 997765 444221000 0011111 1111 1111 13467899999999985 26899
Q ss_pred EEEcCCCCCC---CC---CHHHHHHHHHHhCCEEEEeccccc-ccc--------cccccCCCC-----CcccEEEecccc
Q 009673 255 IIAGASAYPR---DF---DYPRMRQIADAVGALLMMDMAHIS-GLV--------AASVVADPF-----KYCDVVTTTTHK 314 (529)
Q Consensus 255 Ii~~~s~~p~---~~---d~~~i~~ia~~~g~~livD~ah~~-Gli--------~~~~~~~~~-----~~aDiv~~S~hK 314 (529)
|++++++|++ .. ++++|+++|++||++||+|++|.. +.. ..+.....+ .++|++++|+||
T Consensus 187 vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK 266 (467)
T 2oqx_A 187 IVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKK 266 (467)
T ss_dssp EEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSS
T ss_pred EEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEeccc
Confidence 9998877763 32 478999999999999999988766 321 122111011 247888999999
Q ss_pred cccCCCCeEEEeeCC-CcchhHHHhhhcccc--cCC--CCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 009673 315 SLRGPRGGMIFFKKD-PVLGVELESAINNAV--FPG--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 389 (529)
Q Consensus 315 ~l~GprgG~i~~~~~-~~~~~~l~~~i~~~~--~p~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~ 389 (529)
+++.|.||+++++++ .. ++..++.... ..+ ..++.....++++..+++.... ++..++..++++.+.+.
T Consensus 267 ~~g~~~Gg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~---~~~~~~~~~~~~~l~~~ 340 (467)
T 2oqx_A 267 DAMVPMGGLLCMKDDSFF---DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN---LDWLAYRIAQVQYLVDG 340 (467)
T ss_dssp TTCCSSCEEEEECSGGGH---HHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHH
T ss_pred ccCCCCceEEEecChhHH---HHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhh---HHHHHHHHHHHHHHHHH
Confidence 996666889888762 10 1222222211 111 1233333344444444443222 23445567788999999
Q ss_pred HHhcCcEEecCCCCCceEEEccCC--CCCc-----HHHHHHhH-hcCCeEEcCCCC------C--CCCCCCCCCeEEEcc
Q 009673 390 LVELGYKLVSGGSDNHLVLVDLRP--MGID-----GARVEKIL-DMASITLNKNSV------P--GDKSALVPGGIRIGS 453 (529)
Q Consensus 390 L~~~G~~v~~~gt~~~~~~v~~~~--~~i~-----~~~~~~~L-~~~GI~v~~~~~------P--g~~~~~~~~~iRig~ 453 (529)
|++.|+++. + ...+++++++.. .+++ ...+.+.| .++||.+..... | |...+...+.|||++
T Consensus 341 L~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~ 418 (467)
T 2oqx_A 341 LEEIGVVCQ-Q-AGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTI 418 (467)
T ss_dssp HHHTTCCEE-E-ECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECC
T ss_pred HHHCCCeee-c-CCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEe
Confidence 988788766 3 234667777631 1223 33446666 889999864210 1 100111237899997
Q ss_pred CCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 454 PAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 454 ~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
+... ++++|++++++.|++++..
T Consensus 419 ~~~~---~t~e~i~~~~~~l~~~l~~ 441 (467)
T 2oqx_A 419 PRAT---YTQTHMDFIIEAFKHVKEN 441 (467)
T ss_dssp CTTT---SCHHHHHHHHHHHHHHHHS
T ss_pred cCCC---CCHHHHHHHHHHHHHHHhh
Confidence 6430 4589999999999998864
No 193
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.84 E-value=5.5e-19 Score=183.24 Aligned_cols=282 Identities=17% Similarity=0.131 Sum_probs=183.5
Q ss_pred HHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC
Q 009673 154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (529)
Q Consensus 154 ~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~ 233 (529)
++.+++++|.+ + .|.+++|++|+..++.+++++||+|++.++.|.+.+... .......|. +++.++.
T Consensus 58 ~~~la~~~~~~-~----~i~~~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~----~~~~~~~g~--~~~~~~~-- 124 (386)
T 1cs1_A 58 QRALAELEGGA-G----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLF----DSLAKRGCY--RVLFVDQ-- 124 (386)
T ss_dssp HHHHHHHHTCS-E----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHH----HHHHTTTSC--EEEEECT--
T ss_pred HHHHHHHhCCC-c----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHH----HHHHHhcCC--EEEEeCC--
Confidence 37788899887 2 455699999999999999999999999999886543110 000122343 5555543
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEe
Q 009673 234 STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTT 310 (529)
Q Consensus 234 ~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~ 310 (529)
.|++++++.+++ ++++|+++.++||+ ..|+++|.++|+++|+++|+|++|..+... .++. ++|++++
T Consensus 125 ----~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~-----~~~~~~~di~~~ 194 (386)
T 1cs1_A 125 ----GDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQ-----NPLALGADLVLH 194 (386)
T ss_dssp ----TCHHHHHHHHHT-CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-----CGGGGTCSEEEE
T ss_pred ----CCHHHHHHhhcc-CCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC-----CccccCceEEEE
Confidence 289999999987 89999999888875 779999999999999999999998765432 1222 5799999
Q ss_pred cccccccCCC---CeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 009673 311 TTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA 387 (529)
Q Consensus 311 S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~ 387 (529)
|+||++.||. +|+++++++ ++.+.+....... .++.+....++...+++ .+....++..++++.+.
T Consensus 195 s~sK~~~~~~~~~~G~~~~~~~-----~l~~~l~~~~~~~-~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~ 263 (386)
T 1cs1_A 195 SCTKYLNGHSDVVAGVVIAKDP-----DVVTELAWWANNI-GVTGGAFDSYLLLRGLR-----TLVPRMELAQRNAQAIV 263 (386)
T ss_dssp ETTTTTTCSSCCCCEEEEESSH-----HHHHHHHHHHHHH-TCBCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHH
T ss_pred cCcccccCCCCceeEEEEeCcH-----HHHHHHHHHHHhc-CCCCCHHHHHHHHhccc-----HHHHHHHHHHHHHHHHH
Confidence 9999986654 399999863 4655554332221 12222222222112222 23556677888888898
Q ss_pred HHHHhcC-cEEe-cCC---------------CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCC---------CC--
Q 009673 388 SRLVELG-YKLV-SGG---------------SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV---------PG-- 439 (529)
Q Consensus 388 ~~L~~~G-~~v~-~~g---------------t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~---------Pg-- 439 (529)
+.|++.+ +.-+ .++ ....++.+.+.. ..+.+.+.|++.||.+..... |.
T Consensus 264 ~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~ 340 (386)
T 1cs1_A 264 KYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG---DEQTLRRFLGGLSLFTLAESLGGVESLISHAATM 340 (386)
T ss_dssp HHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS---CHHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGT
T ss_pred HHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC---CHHHHHHHHHhCCcceEcccCCCcceeeeccccc
Confidence 8887742 2211 111 113444555532 256788889999998863110 10
Q ss_pred C--C-C-------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 440 D--K-S-------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 440 ~--~-~-------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
. . + ...++.|||+++.. .++++++.+.++|+++
T Consensus 341 ~~~~~~~~~~~~~g~~~~~iRis~~~~----~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 341 THAGMAPEARAAAGISETLLRISTGIE----DGEDLIADLENGFRAA 383 (386)
T ss_dssp TTTTSCHHHHHHHTCCTTEEEEECCSS----CHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHhcCCCCCeEEEEEccC----CHHHHHHHHHHHHHHh
Confidence 0 0 0 01257899998753 3467777777777654
No 194
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.84 E-value=1.3e-18 Score=182.83 Aligned_cols=334 Identities=14% Similarity=0.039 Sum_probs=200.4
Q ss_pred ceeEecCC--CC---CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673 104 SLELIASE--NF---TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (529)
Q Consensus 104 ~i~L~ase--n~---~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs 178 (529)
.+++.++. ++ .++.|++++...+..... ++..+| . .+...+ .++.++++++.+.++ .+..++|+
T Consensus 45 ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~--~~~~~~-~-~~~~~~----l~~~la~~~~~~~~~---v~~~~ggt 113 (429)
T 1s0a_A 45 LVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSH--VMFGGI-T-HAPAIE----LCRKLVAMTPQPLEC---VFLADSGS 113 (429)
T ss_dssp EEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSC--CCCSSE-E-CHHHHH----HHHHHHHHSCTTCCE---EEEESSHH
T ss_pred EEEcCccHhhccCCCCCHHHHHHHHHHHHhccc--cccccc-C-CHHHHH----HHHHHHHhCCCCCCE---EEEeCCHH
Confidence 35555544 22 589999999888754321 111111 1 122222 236788899876642 23345566
Q ss_pred HHHHHHHHhhc---C----CCCEEEEcCCCCCccccccccc------cccccccccceEEEEEcccCC--CC-CCCCHHH
Q 009673 179 PANFEVYTAIL---K----PHDRIMGLDLPHGGHLSHGFMT------PKRRVSGTSIYFESMPYRLDE--ST-GLVDYDM 242 (529)
Q Consensus 179 ~A~~~~l~all---~----pGD~Vl~~~~~~~g~~s~g~~~------~~~~i~~~g~~~~~v~~~v~~--~~-~~iD~d~ 242 (529)
+|+..++.++. + |||+|+++++.+.+........ +.............++++... +. +.+|+++
T Consensus 114 ea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 193 (429)
T 1s0a_A 114 VAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVG 193 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHH
T ss_pred HHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHH
Confidence 99998887653 2 7999999998764421100000 000000000112444443210 12 3589999
Q ss_pred HHHHhhh--cCCcEEEEcCC-CCCC--CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEe
Q 009673 243 LEKTAIL--FRPKLIIAGAS-AYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTT 310 (529)
Q Consensus 243 le~~i~~--~~pklIi~~~s-~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~ 310 (529)
|++++++ .++++|+++.. ++++ ..+ +++|+++|++||++||+|++|. |+...+.. . ..+. ..|+++
T Consensus 194 l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~g~~g~~~~~~~~~~~~d~~t- 271 (429)
T 1s0a_A 194 FARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIAT-GFGRTGKLFACEHAEIAPDILC- 271 (429)
T ss_dssp HHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEE-
T ss_pred HHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CCcccchHHHhhhcCCCCCEEE-
Confidence 9999874 25667777755 5654 455 9999999999999999999975 32211110 0 0011 357774
Q ss_pred cccccccC--CCCeEEEeeCCCcchhHHHhhhcccc-----cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673 311 TTHKSLRG--PRGGMIFFKKDPVLGVELESAINNAV-----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (529)
Q Consensus 311 S~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~~-----~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a 383 (529)
++|+|+| .|.|++++++ ++.+.+.... ..+..+ .+...+++..++++.+... ++.+++.+++
T Consensus 272 -~sK~l~~G~~~iG~~~~~~------~~~~~l~~~~~~~~~~~~t~~-~n~~~~~a~~aal~~~~~~---~~~~~~~~~~ 340 (429)
T 1s0a_A 272 -LGKALTGGTMTLSATLTTR------EVAETISNGEAGCFMHGPTFM-GNPLACAAANASLAILESG---DWQQQVADIE 340 (429)
T ss_dssp -ECGGGGTSSSCCEEEEECH------HHHHHHHTSTTSSCSCCCTTT-TCHHHHHHHHHHHHHHHTC---HHHHHHHHHH
T ss_pred -ecccccCCCccceEEEeCH------HHHHHhhcCCCcccccCCCCC-CCHHHHHHHHHHHHHHHhC---CHHHHHHHHH
Confidence 5699865 6779999987 6666665421 112222 2444555555677765443 4567777888
Q ss_pred HHHHHHHHhc----CcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccC
Q 009673 384 RALASRLVEL----GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTR 459 (529)
Q Consensus 384 ~~l~~~L~~~----G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~ 459 (529)
+++.+.|++. ++..+.+ ...++++++.. ..+...+.+.|.++||.+.. + .+.+||+.+..
T Consensus 341 ~~l~~~L~~l~~~~~~~~~~~--~g~~~~~~~~~-~~~~~~l~~~l~~~Gi~v~~----~------~~~iRis~~~~--- 404 (429)
T 1s0a_A 341 VQLREQLAPARDAEMVADVRV--LGAIGVVETTH-PVNMAALQKFFVEQGVWIRP----F------GKLIYLMPPYI--- 404 (429)
T ss_dssp HHHHHHHGGGGGCTTEEEEEE--ETTEEEEEESS-CBCHHHHHHHHHHTTEECCC----B------TTEEEECCCTT---
T ss_pred HHHHHHHHHHhcCCCEEEEEE--eeEEEEEEECC-cccHHHHHHHHHHCCCEEec----c------CCEEEEECCCC---
Confidence 8999998773 3332222 23456777643 34567777888789999843 1 36899997654
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 009673 460 GFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 460 g~~~~d~~~la~~i~~~~~ 478 (529)
.+++|++++++.|++++.
T Consensus 405 -~t~e~i~~~~~~l~~~~~ 422 (429)
T 1s0a_A 405 -ILPQQLQRLTAAVNRAVQ 422 (429)
T ss_dssp -CCHHHHHHHHHHHHHHTS
T ss_pred -CCHHHHHHHHHHHHHHHH
Confidence 358999999999988754
No 195
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.83 E-value=2.9e-19 Score=187.71 Aligned_cols=311 Identities=15% Similarity=0.127 Sum_probs=195.1
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--- 190 (529)
.+|.|.+++...+.. +.. .... | ..+...++ ++++++++|.+. .+..++|++|+..++.++..
T Consensus 74 ~~p~v~~ai~~~~~~-~~~--~~~~-~-~~~~~~~l----~~~la~~~g~~~-----v~~~~ggteA~~~al~~~~~~~~ 139 (420)
T 2pb2_A 74 CHPALVEALKSQGET-LWH--TSNV-F-TNEPALRL----GRKLIDATFAER-----VLFMNSGTEANETAFKLARHYAC 139 (420)
T ss_dssp TCHHHHHHHHHHHTT-CCC--CCTT-S-CCHHHHHH----HHHHHHHSSCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccc--ccCc-c-CCHHHHHH----HHHHHhhCCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 579999999887743 322 1111 2 22333333 477888888532 24456778999999988765
Q ss_pred ----CCC-EEEEcCCCCCccccccccccccccccccce-----E-----EEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 009673 191 ----PHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (529)
Q Consensus 191 ----pGD-~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-----~-----~~v~~~v~~~~~~iD~d~le~~i~~~~pklI 255 (529)
||+ +|+++++.+.+.... .+...|.. + .+..++ ..|+++|++++++ ++++|
T Consensus 140 ~~~~~g~~~vi~~~~~yh~~~~~-------~~~~~g~~~~~~~~~p~~~~~~~~~------~~d~~~le~~i~~-~~~~v 205 (420)
T 2pb2_A 140 VRHSPFKTKIIAFHNAFHGRSLF-------TVSVGGQPKYSDGFGPKPADIIHVP------FNDLHAVKAVMDD-HTCAV 205 (420)
T ss_dssp HHTCTTCCEEEEETTCCCCSSHH-------HHHHSSCHHHHTTSSSCCSCEEEEC------TTCHHHHHHHCCT-TEEEE
T ss_pred hccCCCCCEEEEEeCCcCCcCHH-------HHHhcCCccccccCCCCCCCeEEec------CCCHHHHHHHhcc-CceEE
Confidence 784 999998876443211 01111210 0 122222 1389999999986 89999
Q ss_pred EEcCCCCCC-C-----CCHHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEeccccccc-CCCCeEEE
Q 009673 256 IAGASAYPR-D-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMIF 325 (529)
Q Consensus 256 i~~~s~~p~-~-----~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l~-GprgG~i~ 325 (529)
+++.+++++ . .++++|+++|++||++||+|++| .|+...+... ..+. ..|++ |++|+++ |.|.|+++
T Consensus 206 i~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~-~g~~~~g~~~~~~~~~~~~dii--t~sK~l~~G~~iG~~~ 282 (420)
T 2pb2_A 206 VVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQ-CGMGRTGDLFAYMHYGVTPDIL--TSAKALGGGFPVSAML 282 (420)
T ss_dssp EECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTT-TTTTTTSSSSHHHHHTCCCSEE--EECGGGGTTSCCEEEE
T ss_pred EEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCC-cCcccCCcHHHHHhcCCCCCeE--EecccccCCCceEEEE
Confidence 988665543 2 36899999999999999999997 5654333110 0011 36877 4679984 56789999
Q ss_pred eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEec--CC
Q 009673 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS--GG 401 (529)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~--~g 401 (529)
+++ ++.+.+.........++ +....++...+|+.+.. +++.+++.++++++.+.|++. +++.+. .+
T Consensus 283 ~~~------~l~~~l~~~~~~~t~~~-~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 352 (420)
T 2pb2_A 283 TTQ------EIASAFHVGSHGSTYGG-NPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRG 352 (420)
T ss_dssp ECH------HHHTTCC----CCEECC-CHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred EhH------HHHHhhcCCCcCcccCc-CHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 987 67666654222222233 33344444456776543 456778888889999888763 333211 11
Q ss_pred CCCceEEEccCCC-CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 402 SDNHLVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 402 t~~~~~~v~~~~~-~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
...++++++... +.+..++.+.|.++||.+.. + .++.+||+.+.. .+++|++++++.|+++++.
T Consensus 353 -~g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~----~-----~~~~iRl~~~~~----~t~eei~~~~~~l~~~l~~ 417 (420)
T 2pb2_A 353 -MGLLIGAELKPKYKGRARDFLYAGAEAGVMVLN----A-----GADVMRFAPSLV----VEEADIHEGMQRFAQAVGK 417 (420)
T ss_dssp -ETTEEEEEECGGGTTCHHHHHHHHHHTTEECEE----S-----STTEEEECCCTT----CCHHHHHHHHHHHHHHHHH
T ss_pred -cceEEEEEECCCchHHHHHHHHHHHHCCCEEEe----C-----CCCEEEEECCCC----CCHHHHHHHHHHHHHHHHH
Confidence 234566666421 12456777888789999853 2 156899997643 4689999999999988763
No 196
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.83 E-value=1.4e-19 Score=188.19 Aligned_cols=307 Identities=15% Similarity=0.119 Sum_probs=195.8
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--- 190 (529)
.++.|++++...+.. +..+ . +.| ..+...+++ +++++++|.+. .+..++|++|+..++.++..
T Consensus 57 ~~~~v~~a~~~~~~~-~~~~--~-~~~-~~~~~~~l~----~~la~~~g~~~-----v~~~~gg~~a~~~al~~~~~~~~ 122 (397)
T 2ord_A 57 SHPRLVEAIKDQAEK-LIHC--S-NLF-WNRPQMELA----ELLSKNTFGGK-----VFFANTGTEANEAAIKIARKYGK 122 (397)
T ss_dssp TCHHHHHHHHHHHHH-CSCC--C-TTS-EEHHHHHHH----HHHHHTTTSCE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cccC--c-ccc-CCHHHHHHH----HHHHHhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 479999999887753 2221 1 112 223334444 77888888432 24456777999999888763
Q ss_pred ---C-CCEEEEcCCCCCccccccccccccccccccce-----E-----EEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673 191 ---P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (529)
Q Consensus 191 ---p-GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-----~-----~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi 256 (529)
| +|+|+++++.+.+.... .+...|.. + .++.++. .|+++|++.+++ ++++|+
T Consensus 123 ~~~~~~~~vi~~~~~yh~~~~~-------~~~~~g~~~~~~~~~p~~~~~~~~~~------~d~~~l~~~l~~-~~~~v~ 188 (397)
T 2ord_A 123 KKSEKKYRILSAHNSFHGRTLG-------SLTATGQPKYQKPFEPLVPGFEYFEF------NNVEDLRRKMSE-DVCAVF 188 (397)
T ss_dssp HHCTTCCEEEEEBTCCCCSSHH-------HHHHSBCHHHHGGGCSCCTTEEEECT------TCHHHHHHHCCT-TEEEEE
T ss_pred cCCCCCceEEEEcCCcCCCchh-------hhhccCChhhccccCCCCCCeeEecC------CCHHHHHHHhhc-CeEEEE
Confidence 5 47899888776433210 11122221 0 0233332 389999999986 899999
Q ss_pred EcCCCCCC-C-----CCHHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-cccEEEeccccccc-CCCCeEEE
Q 009673 257 AGASAYPR-D-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSLR-GPRGGMIF 325 (529)
Q Consensus 257 ~~~s~~p~-~-----~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~aDiv~~S~hK~l~-GprgG~i~ 325 (529)
+++++||+ . .++++|.++|++||++||+|++|. |+...+. ..++ . ..|++ |++|++. |+|.|+++
T Consensus 189 ~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~-~~~~~~~~~~~d~~--s~sK~~~~G~r~G~~~ 264 (397)
T 2ord_A 189 LEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC-GMGRTGK-LFAYQKYGVVPDVL--TTAKGLGGGVPIGAVI 264 (397)
T ss_dssp ECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSS-SSHHHHHTCCCSEE--EECGGGGTTSCCEEEE
T ss_pred EecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCcc-chhhhhhCCCCCee--eeccccCCCcCeEEEE
Confidence 99888875 3 478999999999999999999975 6543331 1111 1 36876 5579985 56789999
Q ss_pred eeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcEEec--CC
Q 009673 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS--GG 401 (529)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~v~~--~g 401 (529)
+++ ++. .+.........+. +....+++..+|+.... ++..+++.++++.+.+.|++. +++++. .+
T Consensus 265 ~~~------~~~-~l~~~~~~~~~~~-~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 333 (397)
T 2ord_A 265 VNE------RAN-VLEPGDHGTTFGG-NPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRG 333 (397)
T ss_dssp ECS------TTC-CCCTTSSCCSSTT-CHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred Ech------Hhc-ccCCCCcCCCCCC-CHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEE
Confidence 988 444 4432211122222 34444555557776543 356677888889999988774 343211 11
Q ss_pred CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 402 SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 402 t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
...++++++.. ..+..++.+.|.++||.+.. + .++.+||+.+.. .+++|++++++.|++++.
T Consensus 334 -~g~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~----~-----~~~~iRis~~~~----~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 334 -MGLMIGIQFRE-EVSNREVATKCFENKLLVVP----A-----GNNTIRFLPPLT----VEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp -ETTEEEEEECT-TSCHHHHHHHHHHTTEECEE----E-----TTTEEEECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred -EeEEEEEEECC-hHHHHHHHHHHHHCCCEEcc----C-----CCCEEEEECCcC----CCHHHHHHHHHHHHHHHh
Confidence 23456666643 23567788888789999853 2 257899997543 468999999999988764
No 197
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.83 E-value=2.4e-20 Score=193.56 Aligned_cols=319 Identities=15% Similarity=0.160 Sum_probs=194.7
Q ss_pred cceeEecCC----C---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc-CC--CCCCCceee
Q 009673 103 KSLELIASE----N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-NL--DENKWGVNV 172 (529)
Q Consensus 103 ~~i~L~ase----n---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~-g~--~~~~~~~~V 172 (529)
+.|+|..++ + ++++.|.+++...+.+....+|+. .....++++ .+++++ +. +++ +|
T Consensus 27 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr~----~la~~~~~~~~~~~----~v 92 (394)
T 2ay1_A 27 GKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAG------LSGEPEFQK----AMGELILGDGLKSE----TT 92 (394)
T ss_dssp TCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCC------SSCCHHHHH----HHHHHHHGGGCCGG----GE
T ss_pred cccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCC------CCCcHHHHH----HHHHHHhCCCCCcc----cE
Confidence 467887765 2 347999999987764322223322 111234553 344443 43 443 23
Q ss_pred e---cCChHHHHHHHHHhhc--CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHH
Q 009673 173 Q---PLSGSPANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKT 246 (529)
Q Consensus 173 ~---~~sGs~A~~~~l~all--~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~-~~~~iD~d~le~~ 246 (529)
. +.+|++|+..++.++. .|||+|++++|.|.++.. .+...|. +++.+++++ +++.+|++++++.
T Consensus 93 ~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~ 162 (394)
T 2ay1_A 93 ATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVS--------IMNFMGL--PVQTYRYFDAETRGVDFEGMKAD 162 (394)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHH--------HHHHHTC--CEEEEECEETTTTEECHHHHHHH
T ss_pred EEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHH--------HHHHcCC--ceEEEecccccCCccCHHHHHHH
Confidence 3 4455699998887764 499999999987755421 2233454 455555532 3578999999999
Q ss_pred hhhc--CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEeccccccccccc---ccC-CCCC--cc-cEEEecc
Q 009673 247 AILF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS---VVA-DPFK--YC-DVVTTTT 312 (529)
Q Consensus 247 i~~~--~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~livD~ah~~Gli~~~---~~~-~~~~--~a-Div~~S~ 312 (529)
+++. +++++++++++||+ .. ++++|.++|+++|+++|+|++|.. +...+ ..+ ..+. +. .++++|+
T Consensus 163 l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 241 (394)
T 2ay1_A 163 LAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQG-FGDGLEEDAAGTRLIASRIPEVLIAASC 241 (394)
T ss_dssp HHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTT-SSSCHHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred HHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccc-cccCcccchHHHHHHhhcCCCEEEEEec
Confidence 9763 24667778888886 44 467889999999999999999653 22211 000 0011 22 3778999
Q ss_pred cccc--cCCCCeEEEe--eCCCcchhHHH----hhhcccccCCCCCCChHHHHHHHHHHHHHh-----cCchHHHHHHHH
Q 009673 313 HKSL--RGPRGGMIFF--KKDPVLGVELE----SAINNAVFPGLQGGPHNHTIGGLAVCLKHA-----QSPEFKVYQNKV 379 (529)
Q Consensus 313 hK~l--~GprgG~i~~--~~~~~~~~~l~----~~i~~~~~p~~~g~p~~~~iaala~al~~~-----~~~~~~~~~~~i 379 (529)
||++ +|.|.|++++ +++ ++. +.+.........+.+.. ..+++..+++.. .....++..+++
T Consensus 242 sK~~~~~G~riG~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~-~~~a~~~~l~~~~l~~~~~~~~~~~~~~~ 315 (394)
T 2ay1_A 242 SKNFGIYRERTGCLLALCADA-----ATRELAQGAMAFLNRQTYSFPPFH-GAKIVSTVLTTPELRADWMAELEAVRSGM 315 (394)
T ss_dssp TTTTTCGGGCEEEEEEECSSH-----HHHHHHHHHHHHHHHTTTSSCCCH-HHHHHHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCcCCccceEEEEeCCH-----HHHHHHHHHHHHHHhhhcCCCChH-HHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 9997 5778899998 221 332 22221111222222233 333333345421 012346777888
Q ss_pred HHHHHHHHHHHHhcC----cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCC
Q 009673 380 VSNCRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPA 455 (529)
Q Consensus 380 ~~~a~~l~~~L~~~G----~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~ 455 (529)
.++++.+.+.|++.| +.+..+. ...+.|+++ +.+.+.+.|+++||.+. | ++||++..
T Consensus 316 ~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~~~~~~-----~~~~~~~~l~~~gi~v~----~---------~~Ris~~~ 376 (394)
T 2ay1_A 316 LRLREQLAGELRDLSGSDRFGFVAEH-RGMFSRLGA-----TPEQVKRIKEEFGIYMV----G---------DSRINIAG 376 (394)
T ss_dssp HHHHHHHHHHHHHHHTSSTTTHHHHC-CSSEEECCC-----CHHHHHHHHHHHCEECC----T---------TCEEEGGG
T ss_pred HHHHHHHHHHHHhcCCCCCeeEEcCC-ceEEEeeCC-----CHHHHHHHHHhCCEEec----C---------CCeEEeec
Confidence 888999999998754 6654432 234455544 34567888889999983 2 36998652
Q ss_pred CccCCCCHHHHHHHHHHHHHH
Q 009673 456 MTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 456 ~tt~g~~~~d~~~la~~i~~~ 476 (529)
.+++|++++++.|+++
T Consensus 377 -----~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 377 -----LNDNTIPILARAIIEV 392 (394)
T ss_dssp -----CCTTTHHHHHHHHHHH
T ss_pred -----CCHhhHHHHHHHHHHc
Confidence 3579999999988764
No 198
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.83 E-value=1.1e-19 Score=193.35 Aligned_cols=322 Identities=17% Similarity=0.143 Sum_probs=195.5
Q ss_pred cceeEecC-C--CCCcHHHHHHHhhhhh---ccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC
Q 009673 103 KSLELIAS-E--NFTSRAVMEAVGSCLT---NKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS 176 (529)
Q Consensus 103 ~~i~L~as-e--n~~~~~V~eal~~~l~---~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~s 176 (529)
+.|.+..+ + ..+++.|.+++..... ..-..+|. ..|++..++ +++++++++|.+. .+.+++
T Consensus 90 ~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~----~~g~~~~~~----l~~~la~~~g~~~-----~i~~~s 156 (464)
T 1ibj_A 90 LLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYT----RSGNPTRDA----LESLLAKLDKADR-----AFCFTS 156 (464)
T ss_dssp HHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBT----TTCCHHHHH----HHHHHHHHHTCSE-----EEEESS
T ss_pred eEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCcccc----CCCCHHHHH----HHHHHHHHhCCCe-----EEEECC
Confidence 34666543 3 3467777777653210 00011121 124444444 3478899999762 355688
Q ss_pred hHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 009673 177 GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (529)
Q Consensus 177 Gs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi 256 (529)
|++|+..++. +++|||+|+++++.|++..... ...+...|. +++.++++ |+++|++.+++ ++++|+
T Consensus 157 Gt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~----~~~~~~~G~--~v~~v~~~------d~~~l~~~i~~-~tk~v~ 222 (464)
T 1ibj_A 157 GMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLL----SQVVPRSGV--VVKRVNTT------KLDEVAAAIGP-QTKLVW 222 (464)
T ss_dssp HHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHH----HHTSGGGTC--EEEEECTT------SHHHHHHHCCS-SEEEEE
T ss_pred HHHHHHHHHH-HhCCCCEEEEECCCchhHHHHH----HHHHHHcCC--EEEEeCCC------CHHHHHHHhcc-CceEEE
Confidence 9999887764 8899999999999876542100 001223454 56665542 89999999987 899999
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEecccccccCC---CCeEEEeeCCC
Q 009673 257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDP 330 (529)
Q Consensus 257 ~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~Gp---rgG~i~~~~~~ 330 (529)
+++++||+ ..|+++|+++|++||++||+|++|+.|... .++. ++|++++|+||++.|| ++|+++++++
T Consensus 223 l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~-----~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~- 296 (464)
T 1ibj_A 223 LESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE- 296 (464)
T ss_dssp ECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTC-----CGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSH-
T ss_pred EeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccC-----ChhhcCCEEEEECCcccccCCCCCcEEEEEEChH-
Confidence 99998886 779999999999999999999998766431 2222 5899999999999765 6699999863
Q ss_pred cchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc---------------C
Q 009673 331 VLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL---------------G 394 (529)
Q Consensus 331 ~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~---------------G 394 (529)
++.+.+..... .+ .+.....+.+++ .+++ ....+.++...++..+.+.|++. |
T Consensus 297 ----~l~~~l~~~~~~~g-~~~~~~~~~a~~-~al~-----~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~ 365 (464)
T 1ibj_A 297 ----KLAKEVYFLQNSEG-SGLAPFDCWLCL-RGIK-----TMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPG 365 (464)
T ss_dssp ----HHHHHHHHHHHHTT-CBCCHHHHHHHH-HHHT-----THHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTT
T ss_pred ----HHHHHHHHHHHhcC-CCCCHHHHHHHH-hchh-----hHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcc
Confidence 56665543221 11 111122222222 2332 12233444555666666777653 2
Q ss_pred cEEecCCC--CCceEEEccCCCCCc-HHHHHHhHhcCCeEEcCCC------CCCCC------------CCCCCCeEEEcc
Q 009673 395 YKLVSGGS--DNHLVLVDLRPMGID-GARVEKILDMASITLNKNS------VPGDK------------SALVPGGIRIGS 453 (529)
Q Consensus 395 ~~v~~~gt--~~~~~~v~~~~~~i~-~~~~~~~L~~~GI~v~~~~------~Pg~~------------~~~~~~~iRig~ 453 (529)
+.+..+.. ...++++++. +.+ ...+.+.|...||.++.+. .|+.. ....++.|||++
T Consensus 366 ~~~~~~~~~g~g~~~~~~l~--~~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsv 443 (464)
T 1ibj_A 366 HHLHFSQAKGAGSVFSFITG--SVALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISA 443 (464)
T ss_dssp HHHHTTTCSCCCSEEEEECS--CHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEEC
T ss_pred hHHHhccCCCCceEEEEEEC--CHHHHHHHHHhcCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEe
Confidence 22222111 1345666663 222 2346666777888876543 12110 012256799986
Q ss_pred CCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 454 PAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 454 ~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.. +|++++.+.|++++.
T Consensus 444 g~--------edi~~li~~L~~al~ 460 (464)
T 1ibj_A 444 GI--------EDVDDLISDLDIAFK 460 (464)
T ss_dssp CS--------SCHHHHHHHHHHHHH
T ss_pred CC--------CCHHHHHHHHHHHHh
Confidence 52 789999999988765
No 199
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.83 E-value=6.5e-19 Score=184.60 Aligned_cols=322 Identities=15% Similarity=0.038 Sum_probs=194.7
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeee-cCChHHHHHHHHH---hh
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ-PLSGSPANFEVYT---AI 188 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~-~~sGs~A~~~~l~---al 188 (529)
+.++.|++++...+.. +.. .... |...+...++ ++.++++++.+..+ +|. .++|++|+..++. ++
T Consensus 57 ~~~~~v~~a~~~~~~~-~~~--~~~~-~~~~~~~~~l----~~~la~~~~~~~~~---~v~~~~g~~~a~~~~~~~a~~~ 125 (426)
T 1sff_A 57 HLHPKVVAAVEAQLKK-LSH--TCFQ-VLAYEPYLEL----CEIMNQKVPGDFAK---KTLLVTTGSEAVENAVKIARAA 125 (426)
T ss_dssp BTCHHHHHHHHHHTTT-CSC--CCTT-TEECHHHHHH----HHHHHHHSSCSSCE---EEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh-CCC--cccc-ccCCHHHHHH----HHHHHHhCCccccc---EEEEeCchHHHHHHHHHHHHHh
Confidence 3689999999887743 221 1111 2222333333 46788888322211 333 4455599999887 67
Q ss_pred cCCCCEEEEcCCCCCccccccccccccccccccc-------------eEEEEEcccCC--CCCCCCHHHHHHHhhh----
Q 009673 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDE--STGLVDYDMLEKTAIL---- 249 (529)
Q Consensus 189 l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~-------------~~~~v~~~v~~--~~~~iD~d~le~~i~~---- 249 (529)
.++| +|++.+|.|.+..... +...|. .+..++++.+. .++.+|+++|++.++.
T Consensus 126 ~~~~-~vi~~~p~y~~~~~~~-------~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 197 (426)
T 1sff_A 126 TKRS-GTIAFSGAYHGRTHYT-------LALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAP 197 (426)
T ss_dssp HTCC-EEEEETTCCCCSSHHH-------HHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCG
T ss_pred hCCC-eEEEECCCcCCCchHh-------hhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCC
Confidence 7887 8888888775432110 111111 12333433210 1235799999999873
Q ss_pred cCCcEEEEcC-CCCCC-CCC----HHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEeccccccc-CC
Q 009673 250 FRPKLIIAGA-SAYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GP 319 (529)
Q Consensus 250 ~~pklIi~~~-s~~p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l~-Gp 319 (529)
.++++|+++. ++|.+ ..+ +++|.++|++||++||+|++|. |+...+... .... ..|++ |+||++. |.
T Consensus 198 ~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~di~--s~sK~~~~Gl 274 (426)
T 1sff_A 198 EDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQS-GAGRTGTLFAMEQMGVAPDLT--TFAKSIAGGF 274 (426)
T ss_dssp GGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTSCCSEE--EECGGGGTSS
T ss_pred CceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcccchhhhhhcCCCCCEE--EEcccccCCC
Confidence 3678888853 34444 666 9999999999999999999976 654322110 0111 35666 6779984 56
Q ss_pred CCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC--cE-
Q 009673 320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YK- 396 (529)
Q Consensus 320 rgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~G--~~- 396 (529)
|.|++++++ ++.+.+.........+. +....+++..+++.+... ++.+++.++++.+.+.|.+.+ ++
T Consensus 275 riG~~~~~~------~~~~~l~~~~~~~~~~~-~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~ 344 (426)
T 1sff_A 275 PLAGVTGRA------EVMDAVAPGGLGGTYAG-NPIACVAALEVLKVFEQE---NLLQKANDLGQKLKDGLLAIAEKHPE 344 (426)
T ss_dssp CCEEEEEEH------HHHTTSCTTSBCCSSSS-CHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred ceEEEEEcH------HHHhhhccCCcCcCCCC-CHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 679999998 67776654222222233 334444555567655322 356677788888888887632 22
Q ss_pred --EecCCCCCceEEEccCC-------CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673 397 --LVSGGSDNHLVLVDLRP-------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 467 (529)
Q Consensus 397 --v~~~gt~~~~~~v~~~~-------~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~ 467 (529)
.+.+ ...++++++.. .+.+..++.+.|.+.||.+.. |.. .++++||+++.. .+++|++
T Consensus 345 ~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~----~~~---~~~~iRi~~~~~----~~~~~i~ 411 (426)
T 1sff_A 345 IGDVRG--LGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLS----CGP---YYNVLRILVPLT----IEDAQIR 411 (426)
T ss_dssp EEEEEE--ETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEE----EST---TSCEEEECCCTT----CCHHHHH
T ss_pred eEEEEE--EEEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEec----CCC---CCCEEEEECCcc----CCHHHHH
Confidence 1222 24567777642 123355677778788999854 321 257899987633 4589999
Q ss_pred HHHHHHHHHHHH
Q 009673 468 AIADFIHEGVEI 479 (529)
Q Consensus 468 ~la~~i~~~~~~ 479 (529)
++++.|++++..
T Consensus 412 ~~~~~l~~~l~~ 423 (426)
T 1sff_A 412 QGLEIISQCFDE 423 (426)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988753
No 200
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.83 E-value=1.3e-19 Score=188.75 Aligned_cols=283 Identities=13% Similarity=0.110 Sum_probs=177.4
Q ss_pred HHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC
Q 009673 154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (529)
Q Consensus 154 ~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~ 233 (529)
++.+++++|.+. .|.++||++|+..++. +++|||+|++.++.|++.+... ...+...|. +++.++++
T Consensus 61 r~~la~~~g~~~-----~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~----~~~~~~~G~--~v~~v~~~- 127 (393)
T 1n8p_A 61 ERAVAALENAQY-----GLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYF----TKVANAHGV--ETSFTNDL- 127 (393)
T ss_dssp HHHHHHHTTCSE-----EEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHH----HHTSTTTCS--CCEEESSH-
T ss_pred HHHHHHHhCCCc-----EEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHH----HHHHHHcCc--EEEEeCCC-
Confidence 378889999872 4667999999999999 9999999999998876543210 001223344 44554442
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHh----CCEEEEecccccccccccccCCCCC-ccc
Q 009673 234 STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAV----GALLMMDMAHISGLVAASVVADPFK-YCD 306 (529)
Q Consensus 234 ~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~----g~~livD~ah~~Gli~~~~~~~~~~-~aD 306 (529)
| +++++.+++ ++++|++.+++||+ ..|+++|.++|+++ |+++|+|++|..+... .++. ++|
T Consensus 128 -----d-~~l~~~i~~-~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-----~~~~~~~d 195 (393)
T 1n8p_A 128 -----L-NDLPQLIKE-NTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-----NPLNFGAD 195 (393)
T ss_dssp -----H-HHHHHHSCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-----CGGGGTCS
T ss_pred -----h-HHHHHhccc-CceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-----CHHHcCCe
Confidence 7 899999987 79999999888886 78999999999999 9999999998766431 2233 589
Q ss_pred EEEecccccccCC--CC-eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673 307 VVTTTTHKSLRGP--RG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (529)
Q Consensus 307 iv~~S~hK~l~Gp--rg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a 383 (529)
++++|+||+++++ |. |+++++++ ++.+.+...... ..+++.....+++..+++ .+....++..+++
T Consensus 196 i~~~S~sK~~g~~G~rigG~~~~~~~-----~~~~~l~~~~~~-~g~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~ 264 (393)
T 1n8p_A 196 IVVHSATKYINGHSDVVLGVLATNNK-----PLYERLQFLQNA-IGAIPSPFDAWLTHRGLK-----TLHLRVRQAALSA 264 (393)
T ss_dssp EEEEETTTTTTCSSCCCCEEEEESCH-----HHHHHHHHHHHH-HCCCCCHHHHHHHHHHHT-----THHHHHHHHHHHH
T ss_pred EEEEECcccccCCCCceeEEEEeCCH-----HHHHHHHHHHHh-cCCCCCHHHHHHHHhccc-----hHHHHHHHHHHHH
Confidence 9999999998543 34 99998642 566655432111 011112111111112222 3455667778889
Q ss_pred HHHHHHHHhcC--cE-EecCC--------------C--C-CceEEEccCCCCCcHHHHHHhHhcCCeEEcCCC------C
Q 009673 384 RALASRLVELG--YK-LVSGG--------------S--D-NHLVLVDLRPMGIDGARVEKILDMASITLNKNS------V 437 (529)
Q Consensus 384 ~~l~~~L~~~G--~~-v~~~g--------------t--~-~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~------~ 437 (529)
+.+.+.|.+.+ +. +..++ . . .+++.+.+.....+...+...|+..+|.++.+. .
T Consensus 265 ~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~~~s~G~~~s~~~~ 344 (393)
T 1n8p_A 265 NKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIESLLEV 344 (393)
T ss_dssp HHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCCSSCEEEC
T ss_pred HHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceECCCCCCCcceeec
Confidence 99999987753 32 21121 0 1 345555554210122334444444455554331 2
Q ss_pred CCCCC------------CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHH
Q 009673 438 PGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 438 Pg~~~------------~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
|+..+ ...++.||||+...++ +++++.+.++|+++
T Consensus 345 p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~----~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 345 PAVMTHGGIPKEAREASGVFDDLVRISVGIEDT----DDLLEDIKQALKQA 391 (393)
T ss_dssp TTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCH----HHHHHHHHHHHHHH
T ss_pred cccccccccCHHHHHhcCCCCCeEEEEEccCCH----HHHHHHHHHHHHHh
Confidence 32211 1124789999876554 78888888877654
No 201
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.83 E-value=6e-19 Score=185.16 Aligned_cols=326 Identities=15% Similarity=0.075 Sum_probs=191.9
Q ss_pred ceeEecCC--CCC----cHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecC-
Q 009673 104 SLELIASE--NFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPL- 175 (529)
Q Consensus 104 ~i~L~ase--n~~----~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~-~~~~~~~V~~~- 175 (529)
.+++.++. +++ +|.|++|+...+... .. +...+| . .+...+ .++.+++++|.+ ++ +|.++
T Consensus 44 ~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~-~~-~~~~~~-~-~~~~~~----l~~~la~~~~~~~~~----~v~~~~ 111 (419)
T 2eo5_A 44 YLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKL-AH-AAANDF-Y-NIPQLE----LAKKLVTYSPGNFQK----KVFFSN 111 (419)
T ss_dssp EEESSGGGGTTTTCBSCCHHHHHHHHHHHTTS-CC-CSCSCS-C-CHHHHH----HHHHHHHHSSCSSCE----EEEEES
T ss_pred EEEccCChhhhccCCCCCHHHHHHHHHHHhhC-cc-cccccc-C-CHHHHH----HHHHHHHhCCCCcCC----EEEEeC
Confidence 46665554 333 799999998877432 11 111111 1 222222 336788999987 43 34444
Q ss_pred ChHHHHHHHHHhhcC-CCCEEEEcCCCCCcccccccc------ccccccccccceEEEEEcccCCCCCC-----------
Q 009673 176 SGSPANFEVYTAILK-PHDRIMGLDLPHGGHLSHGFM------TPKRRVSGTSIYFESMPYRLDESTGL----------- 237 (529)
Q Consensus 176 sGs~A~~~~l~all~-pGD~Vl~~~~~~~g~~s~g~~------~~~~~i~~~g~~~~~v~~~v~~~~~~----------- 237 (529)
+|++|+..++.++.. +||+|++++|.+.+....... .++........ .++.++++ +.+.
T Consensus 112 gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~-~~~~~~~g~~~~~~~ 188 (419)
T 2eo5_A 112 SGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMP--GVIHVPYP-NPYRNPWHINGYENP 188 (419)
T ss_dssp SHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCT--TEEEECCC-CSSSCTTCCCTTTCH
T ss_pred chHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCC--CCEEECCC-ccccccccccccccc
Confidence 556999999887643 499999999876443210000 00000000111 23333333 2221
Q ss_pred -----CCHHHHH-HHhhh----cCCcEEEEcCCCCC-C-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CC
Q 009673 238 -----VDYDMLE-KTAIL----FRPKLIIAGASAYP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-AD 300 (529)
Q Consensus 238 -----iD~d~le-~~i~~----~~pklIi~~~s~~p-~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~ 300 (529)
+|+++|+ +.+++ .++++|+++..+++ + ..+ +++|+++|++||++||+|++|. |+...+.. ..
T Consensus 189 ~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-~~g~~g~~~~~ 267 (419)
T 2eo5_A 189 SELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQM-GLGRTGKLFAI 267 (419)
T ss_dssp HHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGG
T ss_pred hhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCccCcchhhH
Confidence 4789999 88874 25677777654444 3 455 9999999999999999999975 33222211 00
Q ss_pred C-CC-cccEEEeccccccc-C-CCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHH
Q 009673 301 P-FK-YCDVVTTTTHKSLR-G-PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (529)
Q Consensus 301 ~-~~-~aDiv~~S~hK~l~-G-prgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~ 376 (529)
. .. ..|++ |++|++. | +|.|++++++ ++. .+ .....+..+. +...+++..++++... +..
T Consensus 268 ~~~~~~~d~~--t~sK~~~~G~~riG~~~~~~------~~~-~~-~~~~~~t~~~-n~~~~~aa~aal~~~~-----~~~ 331 (419)
T 2eo5_A 268 ENFNTVPDVI--TLAKALGGGIMPIGATIFRK------DLD-FK-PGMHSNTFGG-NALACAIGSKVIDIVK-----DLL 331 (419)
T ss_dssp GGGTCCCSEE--EECGGGGTTTSCCEEEEEEG------GGC-CC-------CCCC-CHHHHHHHHHHHHHHH-----HHH
T ss_pred HhcCCCCCEE--EecccccCCccceEEEEEch------Hhh-cC-CcccCCCCCC-CHHHHHHHHHHHHHHH-----HHH
Confidence 1 11 35666 5679985 4 7779999988 555 44 2112222222 3444455555676532 267
Q ss_pred HHHHHHHHHHHHHHHhcCcEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCC
Q 009673 377 NKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM 456 (529)
Q Consensus 377 ~~i~~~a~~l~~~L~~~G~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~ 456 (529)
+++.+++++|.+.|.+. +..+.+ ...++++++.+...... +.+.|.++||.+... ..+.+||+.+..
T Consensus 332 ~~~~~~~~~l~~~L~~~-~~~~~~--~g~~~~i~~~~~~~~~~-~~~~l~~~Gv~v~~~---------~~~~lRis~~~~ 398 (419)
T 2eo5_A 332 PHVNEIGKIFAEELQGL-ADDVRG--IGLAWGLEYNEKKVRDR-IIGESFKRGLLLLPA---------GRSAIRVIPPLV 398 (419)
T ss_dssp HHHHHHHHHHHHHHTTS-SSEEEE--ETTEEEEECSCHHHHHH-HHHHHHHTTEECEEE---------TTTEEEECCCTT
T ss_pred HHHHHHHHHHHHHHHHh-hhheEe--eeEEEEEEEecCccHHH-HHHHHHHCCCEEecC---------CCCEEEEECCCC
Confidence 78888899999999775 322222 23456667642111234 767777899998542 146899986543
Q ss_pred ccCCCCHHHHHHHHHHHHHHHH
Q 009673 457 TTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 457 tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.+++|++++++.|++++.
T Consensus 399 ----~t~e~i~~~l~~l~~~l~ 416 (419)
T 2eo5_A 399 ----ISEEEAKQGLDILKKVIK 416 (419)
T ss_dssp ----CCHHHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHHHHH
Confidence 458999999999998875
No 202
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.82 E-value=3.2e-18 Score=177.76 Aligned_cols=313 Identities=14% Similarity=0.128 Sum_probs=187.5
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---- 189 (529)
.+|.|++++...+.. +..++. + + ..+...++ ++++++++|.+. .+..++|++|+..++.++.
T Consensus 53 ~~p~v~~a~~~~~~~-~~~~~~--~-~-~~~~~~~l----~~~la~~~~~~~-----v~~~~gg~ea~~~al~~~~~~~~ 118 (395)
T 3nx3_A 53 NHAKFNAKIKAQVDK-LLHTSN--L-Y-YNENIAAA----AKNLAKASALER-----VFFTNSGTESIEGAMKTARKYAF 118 (395)
T ss_dssp SCHHHHHHHHHHHTT-CSCCCT--T-S-BCHHHHHH----HHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cccccc--c-c-CCHHHHHH----HHHHHHhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 479999999887743 222221 1 1 23333333 377888888432 2445777899999888765
Q ss_pred ---CCCCEEEEcCCCCCccccccccc-----cccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 009673 190 ---KPHDRIMGLDLPHGGHLSHGFMT-----PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (529)
Q Consensus 190 ---~pGD~Vl~~~~~~~g~~s~g~~~-----~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (529)
.++|+|++.++.|.+........ +.......+. ++..++ ..|+++|++++++ ++++|++..++
T Consensus 119 ~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~d~~~l~~~l~~-~~~~v~~~~~~ 189 (395)
T 3nx3_A 119 NKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLIS--GVKFAK------YNDISSVEKLVNE-KTCAIILESVQ 189 (395)
T ss_dssp HTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCS--CEEEEC------TTCHHHHHTTCCT-TEEEEEEESEE
T ss_pred ccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCC--CcEEeC------CCCHHHHHHhccC-CeEEEEEeCcc
Confidence 46899999998874432110000 0000000011 222222 2379999999976 78888887544
Q ss_pred CC-C-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccc-cCCCCeEEEeeCCCc
Q 009673 262 YP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPV 331 (529)
Q Consensus 262 ~p-~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l-~GprgG~i~~~~~~~ 331 (529)
++ + ..+ +++|+++|++||++||+|++|. |+...+.. . .... ..|+++ ++|++ .|+|.|++++++
T Consensus 190 ~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-~~g~~g~~~~~~~~~~~~d~~t--~sK~~~~G~~~G~~~~~~--- 263 (395)
T 3nx3_A 190 GEGGINPANKDFYKALRKLCDEKDILLIADEIQC-GMGRSGKFFAYEHAQILPDIMT--SAKALGCGLSVGAFVINQ--- 263 (395)
T ss_dssp CTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEE--ECGGGTTTSCCEEEEECH---
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCCcCCcchhHHhcCCCCCEEE--ecccccCCCceEEEEEch---
Confidence 33 3 334 8999999999999999999965 33211110 0 0011 346665 55988 467889999988
Q ss_pred chhHH-HhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cC-cEEecCCCCCc
Q 009673 332 LGVEL-ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LG-YKLVSGGSDNH 405 (529)
Q Consensus 332 ~~~~l-~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G-~~v~~~gt~~~ 405 (529)
++ .+.+......+.++.+.. ..++..++++....+ ++.+++.++.+++.+.|.+ .+ +..+.+ ...
T Consensus 264 ---~~~~~~~~~~~~~~~~~~~~~-~~~aa~aal~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~g~ 334 (395)
T 3nx3_A 264 ---KVASNSLEAGDHGSTYGGNPL-VCAGVNAVFEIFKEE---KILENVNKLTPYLEQSLDELINEFDFCKKRKG--LGF 334 (395)
T ss_dssp ---HHHHHHSCTTCCSSCBSCCHH-HHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE--ETT
T ss_pred ---hhhhhhcCCcccCCCCCCCHH-HHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe--EEE
Confidence 66 777755433233333333 333333466654322 3445555666666666654 22 222221 234
Q ss_pred eEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 406 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 406 ~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
++++++.. ..+...+.+.|.+.||.+... .++.+||+.+.. .+++|++++++.|+++++
T Consensus 335 ~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~---------~~~~iRi~~~~~----~t~e~i~~~l~~l~~~l~ 393 (395)
T 3nx3_A 335 MQGLSLDK-SVKVAKVIQKCQENALLLISC---------GENDLRFLPPLI----LQKEHIDEMSEKLRKALK 393 (395)
T ss_dssp EEEEEECT-TSCHHHHHHHHHHTTEECEEE---------TTTEEEECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCC-cchHHHHHHHHHHCCCEEecC---------CCCEEEEECCCC----CCHHHHHHHHHHHHHHHH
Confidence 56666643 235677888888899998532 257899986654 458999999999998875
No 203
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.82 E-value=4.1e-19 Score=184.70 Aligned_cols=249 Identities=16% Similarity=0.120 Sum_probs=164.9
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
++...+++ +++++++|.+. .+.++||++|+..++.++++|||+|+++++.|++...... ......|.
T Consensus 58 ~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~----~~~~~~g~ 124 (389)
T 3acz_A 58 NPTVEQFE----EMVCSIEGAAG-----SAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFT----HWLPRFGI 124 (389)
T ss_dssp CHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHH----HHHHHTTC
T ss_pred ChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHH----HHHHHcCC
Confidence 45455555 77888999872 3567899999999999999999999999998876432110 00123444
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCC
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~ 300 (529)
+++.++. .|++++++.+++ ++++|++.+++||+ ..|+++|.++|+++|+++++|++|..+... .
T Consensus 125 --~~~~v~~------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~-----~ 190 (389)
T 3acz_A 125 --EVDLIDT------SDVEKVKAAWKP-NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFL-----K 190 (389)
T ss_dssp --EEEEECT------TCHHHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTC-----C
T ss_pred --EEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccc-----C
Confidence 5556543 489999999987 88999999888876 789999999999999999999998765421 2
Q ss_pred CCC-cccEEEecccccccCCC---CeEEEeeCCCcchhHHHhhhccccc-CCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 301 PFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 301 ~~~-~aDiv~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
++. ++|+++.|+||++.||. +|++++++. ++.+++..... .+...+ .....+ ++..+. .+..+
T Consensus 191 ~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~-----~~~~~l~~~~~~~g~~~~-~~~~~~----~~~~l~--~l~~r 258 (389)
T 3acz_A 191 PLELGADIALHSVSKYINGHGDVIGGVSSAKTA-----EDIATIKFYRKDAGSLMA-PMDAFL----CARGMK--TLPIR 258 (389)
T ss_dssp GGGTTCSEEEEETTTTTTCSSCCCCEEEEESSH-----HHHHHHHHHHHHHCCCCC-HHHHHH----HHHHHT--THHHH
T ss_pred ccccCCeEEEECChhhccCCCCceeEEEEECcH-----HHHHHHHHHHHhcCCCCC-HHHHHH----HHcCcc--HHHHH
Confidence 233 68999999999997664 499999872 35554443221 111111 121221 222221 23455
Q ss_pred HHHHHHHHHHHHHHHHhcC-cE-EecCC---------------CCCceEEEccCCCCCcHHHHHHhHhcCCeEEcC
Q 009673 376 QNKVVSNCRALASRLVELG-YK-LVSGG---------------SDNHLVLVDLRPMGIDGARVEKILDMASITLNK 434 (529)
Q Consensus 376 ~~~i~~~a~~l~~~L~~~G-~~-v~~~g---------------t~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~ 434 (529)
.++..++++.+.+.|++.+ +. +..++ ....++.+.+. + .+.+.+.|++.||.+..
T Consensus 259 ~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~--~--~~~~~~~l~~~~i~~~~ 330 (389)
T 3acz_A 259 MQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK--S--FEAAKKLMEHLKVCTLA 330 (389)
T ss_dssp HHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES--S--HHHHHHHHTTCSSSEEB
T ss_pred HHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC--C--HHHHHHHHHhCCCcEEC
Confidence 6777888999999998742 21 11111 01234444443 2 46788889888987654
No 204
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.81 E-value=6.2e-18 Score=177.77 Aligned_cols=326 Identities=12% Similarity=0.054 Sum_probs=179.9
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---- 189 (529)
.+|.|++++...+.. ...+++ .++ ..+... ..++++++.++.+.++ .+..++|++|+..++.+++
T Consensus 46 ~~p~v~~a~~~~~~~-~~~~~~-~~~--~~~~~~----~l~~~la~~~~~~~~~---v~~~~gg~ea~~~al~~~~~~~~ 114 (430)
T 3i4j_A 46 GRAEVGERMAAQAAR-LPFVHG-SQF--SSDVLE----EYAGRLARFVGLPTFR---FWAVSGGSEATESAVKLARQYHV 114 (430)
T ss_dssp CCHHHHHHHHHHHHH-CCCCCT-TTC--EEHHHH----HHHHHHHHHTTCTTCE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cccccc-ccc--CCHHHH----HHHHHHHHhCCCCCCE---EEEeCcHHHHHHHHHHHHHHHHH
Confidence 389999999877643 221111 111 122222 3347888999877652 2334567799999998876
Q ss_pred ----CCCCEEEEcCCCCCccccccccccccccccccce-----E-------EEEEcccCCCC---CCCCHHHHHHHhhh-
Q 009673 190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----F-------ESMPYRLDEST---GLVDYDMLEKTAIL- 249 (529)
Q Consensus 190 ----~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-----~-------~~v~~~v~~~~---~~iD~d~le~~i~~- 249 (529)
.++|+|++.++.|.+..... ....+.. + ....++.+ +. +..|+++|+++++.
T Consensus 115 ~~g~~~~~~vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~~l~~~ 186 (430)
T 3i4j_A 115 ERGEPGRFKVITRVPSYHGASLGS-------LAASGMGARRELYTPLMRPEAWPKLPKP-DPARNGAEDAEGLRALLERE 186 (430)
T ss_dssp HTTCTTCCEEEEETTC--------------------------------CGGGSCEECCC-CTTSCHHHHHTHHHHHHHHH
T ss_pred hcCCCCCcEEEEEeCCcCCCCccc-------ccccCccccccccCCcCCCCCceEcCCC-cccchhhHHHHHHHHHHHhc
Confidence 45789999998764432110 1111110 0 00111111 11 23467899998874
Q ss_pred --cCCcEEEEcCCCC-CC--CCC----HHHHHHHHHHhCCEEEEecccccccccccccC--CCC-C-cccEEEecccccc
Q 009673 250 --FRPKLIIAGASAY-PR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPF-K-YCDVVTTTTHKSL 316 (529)
Q Consensus 250 --~~pklIi~~~s~~-p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~-~-~aDiv~~S~hK~l 316 (529)
.++++|+++.+++ ++ ..+ +++|+++|++||++||+|++|. |+...+... ... . ..|+++ ++|++
T Consensus 187 ~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-~~~~~g~~~~~~~~~~~~~di~t--~sK~l 263 (430)
T 3i4j_A 187 GPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMS-GMGRCGSPLALSRWSGVTPDIAV--LGKGL 263 (430)
T ss_dssp CGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTTCCCSEEE--ECGGG
T ss_pred CCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhhhhcCCCCcEEE--Ecccc
Confidence 3556777765443 32 333 8999999999999999999964 433222110 011 1 246665 56998
Q ss_pred c-C-CCCeEEEeeCCCcchhHHHhhhccc----ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673 317 R-G-PRGGMIFFKKDPVLGVELESAINNA----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (529)
Q Consensus 317 ~-G-prgG~i~~~~~~~~~~~l~~~i~~~----~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L 390 (529)
+ | +|.|++++++ ++.+.+... ......+.+.. ..++..++|+.... +++.+++.++.+.+.+.|
T Consensus 264 ~~G~~r~G~~~~~~------~i~~~~~~~~~~~~~~~t~~~~~~-~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~~l 333 (430)
T 3i4j_A 264 AAGYAPLAGLLAAP------QVYETVMGGSGAFMHGFTYAGHPV-SVAAGLSVLDIVER---EDLTGAAKERGAQLLAGL 333 (430)
T ss_dssp TTTSSCCEEEEECH------HHHHHHHHTTCBCCCCCTTTTCHH-HHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHH
T ss_pred cCCccccEEEEECH------HHHHHHhccCCcccccCCCCCCHH-HHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHH
Confidence 4 5 7889999987 777766542 11222233333 33333346765432 234556666666666666
Q ss_pred Hhc-----CcEEecCCCCCceEEEccCCC--------CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCc
Q 009673 391 VEL-----GYKLVSGGSDNHLVLVDLRPM--------GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMT 457 (529)
Q Consensus 391 ~~~-----G~~v~~~gt~~~~~~v~~~~~--------~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~t 457 (529)
.+. ++..+.+ ...++++++... .....++.+.|.+.||.+.....+ ..+..++.+||+.+..
T Consensus 334 ~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~~~~~~iRi~~~~~- 408 (430)
T 3i4j_A 334 QALQARFPQMMQVRG--TGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGA--EPNGRGDHLLLGPPLS- 408 (430)
T ss_dssp HHHHHHCTTEEEEEE--ETTEEEEEEC------------CHHHHHHHHHHTTEECC-------------CEEEECCCTT-
T ss_pred HHHHHhCCCeEEEEE--EEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEecccc--cCCCCCCEEEEECCCC-
Confidence 542 3443332 123555555321 111256777788899998543111 1122356799987644
Q ss_pred cCCCCHHHHHHHHHHHHHHHHH
Q 009673 458 TRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 458 t~g~~~~d~~~la~~i~~~~~~ 479 (529)
.++++++++++.|+++++.
T Consensus 409 ---~t~e~i~~~l~~l~~~l~~ 427 (430)
T 3i4j_A 409 ---ITAAEVDGLLALLAGALED 427 (430)
T ss_dssp ---CCHHHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHHHHHH
Confidence 4589999999999998763
No 205
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.80 E-value=6.6e-18 Score=178.06 Aligned_cols=330 Identities=15% Similarity=0.104 Sum_probs=192.3
Q ss_pred ceeEecCCC-----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC-CCCceeeecCCh
Q 009673 104 SLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSG 177 (529)
Q Consensus 104 ~i~L~asen-----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~-~~~~~~V~~~sG 177 (529)
.|++..+.. ..+|.|++++...+... . .+... .+..+. ....+++++++++... +. .+..++|
T Consensus 45 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~-~~~~~--~~~~~~----~~~l~~~la~~~~~~~~~~---v~~~~gg 113 (439)
T 3dxv_A 45 LIDLSGAWGAASLGYGHPAIVAAVSAAAANP-A-GATIL--SASNAP----AVTLAERLLASFPGEGTHK---IWFGHSG 113 (439)
T ss_dssp EEESSTTTTTCTTCBSCHHHHHHHHHHHHSC-S-CSCSS--SSEEHH----HHHHHHHHHHTTTCTTTEE---EEEESSH
T ss_pred EEECCCchhhccCCCCCHHHHHHHHHHHHhc-c-Ccccc--ccCCHH----HHHHHHHHHHhCCCCCCCE---EEEeCCH
Confidence 456654433 25899999998877532 1 12111 111222 2334478888886544 22 3455777
Q ss_pred HHHHHHHHHhh--cCCCCEEEEcCCCCCccccccccccccccccccce---E---------EEEEcccCCCCCCC-----
Q 009673 178 SPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY---F---------ESMPYRLDESTGLV----- 238 (529)
Q Consensus 178 s~A~~~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~---~---------~~v~~~v~~~~~~i----- 238 (529)
++|+..++.++ ..++++|++.++.+.+.... .....+.. + .+..++.+ +.+..
T Consensus 114 sea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 185 (439)
T 3dxv_A 114 SDANEAAYRAIVKATGRSGVIAFAGAYHGCTVG-------SMAFSGHSVQADAAKADGLILLPYPDPYR-PYRNDPTGDA 185 (439)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHH-------HHCC-------------CEEEECCCCSSS-CBTTBTTSHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHH-------HHhhcCCCchhhccccCCCCCCcEEcCCC-cccccccHHH
Confidence 89999998875 34678888888765332211 11111110 0 11122221 11112
Q ss_pred CHHHHHHHhh---hcCCcEEEEcCCCCC-C-CCC----HHHHHHHHHHhCCEEEEecccccccccccc-cC-CCCC-ccc
Q 009673 239 DYDMLEKTAI---LFRPKLIIAGASAYP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCD 306 (529)
Q Consensus 239 D~d~le~~i~---~~~pklIi~~~s~~p-~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~~-~~~~-~aD 306 (529)
|+++|++++. ..++++|++..++++ + ..+ +++|+++|++||++||+|++|. |+...+. .. .... ..|
T Consensus 186 d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-g~g~~g~~~~~~~~~~~~d 264 (439)
T 3dxv_A 186 ILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKV-GLARSGRLHCFEHEGFVPD 264 (439)
T ss_dssp HHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-CTTTTSSSSGGGGTTCCCS
T ss_pred HHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhcCCCCC
Confidence 7999999994 336678888755443 2 455 9999999999999999999975 5432221 11 0111 357
Q ss_pred EEEecccccc-cCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Q 009673 307 VVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (529)
Q Consensus 307 iv~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~ 385 (529)
++ |++|++ +|+|.|++++++ ++.+.+......... + +...+++...+++.... .++.+++.++.+.
T Consensus 265 i~--s~sK~~~~G~riG~~~~~~------~~~~~~~~~~~~~t~-~-~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~ 331 (439)
T 3dxv_A 265 IL--VLGKGLGGGLPLSAVIAPA------EILDCASAFAMQTLH-G-NPISAAAGLAVLETIDR---DDLPAMAERKGRL 331 (439)
T ss_dssp EE--EECGGGGTTSCCEEEEEEH------HHHTSCSSSSCCTTT-T-CHHHHHHHHHHHHHHHH---TTHHHHHHHHHHH
T ss_pred EE--EEcchhcCCcceEEEEECH------HHHhhhcCCCcCCCc-c-cHHHHHHHHHHHHHHHh---cCHHHHHHHHHHH
Confidence 76 677998 467889999988 777777654322223 3 33333333345665432 2345666677777
Q ss_pred HHHHHHhc----C-cEEecCCCCCceEEEccC-------CCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc
Q 009673 386 LASRLVEL----G-YKLVSGGSDNHLVLVDLR-------PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS 453 (529)
Q Consensus 386 l~~~L~~~----G-~~v~~~gt~~~~~~v~~~-------~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~ 453 (529)
+.+.|.+. + +..+.+ ...++++++. +.+.+...+.+.|.+.||.+... . ..++.+||+.
T Consensus 332 ~~~~l~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----~---~~~~~iRi~~ 402 (439)
T 3dxv_A 332 LRDGLSELAKRHPLIGDIRG--RGLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYV----G---MNGNVLEFTP 402 (439)
T ss_dssp HHHHHHHHHHHCTTEEEEEE--ETTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEE----S---TTSCEEEECC
T ss_pred HHHHHHHHHHhCCCeEEEEE--EEEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeec----C---CCCCEEEEEC
Confidence 77777652 2 222222 2344555542 11222455777777789998542 1 1247899986
Q ss_pred CCCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 454 PAMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 454 ~~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
+.. .+++|++++++.|++++..
T Consensus 403 ~~~----~t~e~i~~~l~~l~~~l~~ 424 (439)
T 3dxv_A 403 PLT----ITETDIHKALDLLDRAFSE 424 (439)
T ss_dssp CTT----CCHHHHHHHHHHHHHHHHT
T ss_pred CCC----CCHHHHHHHHHHHHHHHHH
Confidence 644 4589999999999998864
No 206
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.80 E-value=6.3e-18 Score=178.81 Aligned_cols=319 Identities=15% Similarity=0.058 Sum_probs=192.0
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC--
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-- 190 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~-~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~-- 190 (529)
.++.|++|+...+.+. . + .++ ....+...+ .+++++++++.+.+. .+..++|++|+..++.++..
T Consensus 67 ~~~~v~~a~~~~~~~~-~--~--~~~~~~~~~~~~~----l~~~la~~~~~~~~~---v~~~~ggsea~~~al~~~~~~~ 134 (449)
T 3a8u_X 67 TRKEIQEAVAKQLSTL-D--Y--SPGFQYGHPLSFQ----LAEKITDLTPGNLNH---VFFTDSGSECALTAVKMVRAYW 134 (449)
T ss_dssp SCHHHHHHHHHHTTTC-S--C--CCSSSCCCHHHHH----HHHHHHTTSSTTEEE---EEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhC-C--C--ccccccCCHHHHH----HHHHHHHhCCCCCCE---EEEcCcHHHHHHHHHHHHHHHH
Confidence 4799999998877432 1 1 111 111222333 337788888766542 23456677999999887753
Q ss_pred ------CCCEEEEcCCCCCcccccccccccccccccc------------ceEEEEEcccCCC-C-CCCC--------HHH
Q 009673 191 ------PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDES-T-GLVD--------YDM 242 (529)
Q Consensus 191 ------pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g------------~~~~~v~~~v~~~-~-~~iD--------~d~ 242 (529)
+||+|++.++.|.+.... .+...| ..+..++++.... . ..+| +++
T Consensus 135 ~~~g~~~~~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~ 207 (449)
T 3a8u_X 135 RLKGQATKTKMIGRARGYHGVNIA-------GTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADE 207 (449)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHH-------HHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCcCCCChh-------hhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHH
Confidence 789999999877543211 011111 1124444332100 1 1246 999
Q ss_pred HHHHhhh---cCCcEEEEcCCCCC-C-CCC----HHHHHHHHHHhCCEEEEecccc-cccccccccC-CCCC-cccEEEe
Q 009673 243 LEKTAIL---FRPKLIIAGASAYP-R-DFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVA-DPFK-YCDVVTT 310 (529)
Q Consensus 243 le~~i~~---~~pklIi~~~s~~p-~-~~d----~~~i~~ia~~~g~~livD~ah~-~Gli~~~~~~-~~~~-~aDiv~~ 310 (529)
|++++++ .++++|+++..+++ + ..+ +++|+++|++||++||+|++|. +|.... ... ..+. ..|++
T Consensus 208 le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~-~~~~~~~~~~~di~-- 284 (449)
T 3a8u_X 208 LLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGS-MFGADSFGVTPDLM-- 284 (449)
T ss_dssp HHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSHHHHHTCCCSEE--
T ss_pred HHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCc-chhhhhcCCCCCEE--
Confidence 9999974 25677777654332 3 567 9999999999999999999974 432211 000 0001 35776
Q ss_pred cccccccC--CCCeEEEeeCCCcchhHHHhhhccc---------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHH
Q 009673 311 TTHKSLRG--PRGGMIFFKKDPVLGVELESAINNA---------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV 379 (529)
Q Consensus 311 S~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~---------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i 379 (529)
|++|+|+| .|.|++++++ ++.+.+... ...+..++ +...+++..++++.+... ++.+++
T Consensus 285 s~sK~l~~G~~~~G~~~~~~------~~~~~l~~~~~~~~~~~~~~~~t~~~-~~~~~aa~~aal~~~~~~---~~~~~~ 354 (449)
T 3a8u_X 285 CIAKQVTNGAIPMGAVIAST------EIYQTFMNQPTPEYAVEFPHGYTYSA-HPVACAAGLAALCLLQKE---NLVQSV 354 (449)
T ss_dssp EECGGGGTTSSCCEEEEEEH------HHHHHHHTCSSCTTSCSSCCCCTTTT-CHHHHHHHHHHHHHHHHT---THHHHH
T ss_pred EEcccccCCCCceEEEEECH------HHHHHhhccCcccccccccccCCCcc-cHHHHHHHHHHHHHHHhc---CHHHHH
Confidence 56699965 6889999987 676666442 11112222 334444545567654322 456778
Q ss_pred HHHHHHHHHHHHhcC-cEEecC-CCCCceEEEccCCCCC----cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc
Q 009673 380 VSNCRALASRLVELG-YKLVSG-GSDNHLVLVDLRPMGI----DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS 453 (529)
Q Consensus 380 ~~~a~~l~~~L~~~G-~~v~~~-gt~~~~~~v~~~~~~i----~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~ 453 (529)
.++++.+.+.|++.+ +.++.. .....++++++..... +...+.+.|.++||.+.. + .+.+||+.
T Consensus 355 ~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~------g~~iRis~ 424 (449)
T 3a8u_X 355 AEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRF----G------GDTLQFGP 424 (449)
T ss_dssp HHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEE----E------TTEEEECC
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEec----C------CCEEEEEC
Confidence 888888999997732 322210 0123566777653211 123577777778999853 2 26899997
Q ss_pred CCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 454 PAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 454 ~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+.. .+++|++++++.|++++.
T Consensus 425 ~~~----~t~~~i~~~l~~l~~~l~ 445 (449)
T 3a8u_X 425 TFN----SKPQDLDRLFDAVGEVLN 445 (449)
T ss_dssp CTT----CCHHHHHHHHHHHHHHHH
T ss_pred CCc----CCHHHHHHHHHHHHHHHH
Confidence 643 458999999999998875
No 207
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.79 E-value=5.1e-19 Score=184.13 Aligned_cols=280 Identities=13% Similarity=0.031 Sum_probs=175.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhcCCCC----EEEEcCCCCCcccccccccccccccccc
Q 009673 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (529)
Q Consensus 147 d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD----~Vl~~~~~~~g~~s~g~~~~~~~i~~~g 221 (529)
.++++.+.+++. ..|.+...- .+|.+++|+ +++..++.++++||| +|++.+|.|.++.. .+...|
T Consensus 71 ~~lr~aia~~~~-~~g~~~~~~-~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~--------~~~~~g 140 (391)
T 3bwn_A 71 PELEDAIKDLHG-VVGNAATED-RYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVE--------ETTYVR 140 (391)
T ss_dssp HHHHHHHHHHHH-HHCSBCCSS-SEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHH--------HHHTTC
T ss_pred HHHHHHHHHHHH-hcCCCCCCC-CeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHH--------HHHHcC
Confidence 466655555554 455543210 256678888 999999999999999 99999998865431 233445
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhC--CEEEEecccccccccccccC
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG--ALLMMDMAHISGLVAASVVA 299 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g--~~livD~ah~~Gli~~~~~~ 299 (529)
. +++.+++|.+. ++ .+ ++|+|++++|+||+-.-+.+|++ ++++ ++||+|++|+.+. .
T Consensus 141 ~--~~~~~~~d~~~--l~--------~~-~~k~v~l~~p~NPtG~~~~~l~~--~~~~~~~~ii~De~y~~~~------~ 199 (391)
T 3bwn_A 141 S--GMYKWEGDAWG--FD--------KK-GPYIELVTSPNNPDGTIRETVVN--RPDDDEAKVIHDFAYYWPH------Y 199 (391)
T ss_dssp B--TTEEEEEESTT--CC--------CC-SCEEEEEESSCTTTCCCCCCCC-------CCCEEEEECTTCSTT------T
T ss_pred C--eEEEecCCHHH--cC--------CC-CCEEEEECCCCCCCchhHHHHHH--HhhcCCCEEEEeCCCCCCC------C
Confidence 4 34455555322 21 13 78999999999997211224433 2255 9999999976321 1
Q ss_pred CCC---CcccEEEecccccc--cCCCCeEEEe-eCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc-----
Q 009673 300 DPF---KYCDVVTTTTHKSL--RGPRGGMIFF-KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ----- 368 (529)
Q Consensus 300 ~~~---~~aDiv~~S~hK~l--~GprgG~i~~-~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~----- 368 (529)
.++ ...+++++|+||++ +|+|.||+++ ++ ++.+.+.........+.+.. ...++..+|+...
T Consensus 200 ~~l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~------~l~~~l~~~~~~~~~~~~~~-~q~a~~~~l~~~~~~~~~ 272 (391)
T 3bwn_A 200 TPITRRQDHDIMLFTFSKITGHAGSRIGWALVKDK------EVAKKMVEYIIVNSIGVSKE-SQVRTAKILNVLKETCKS 272 (391)
T ss_dssp SCCCCCBCCSEEEEEHHHHHSCGGGCEEEEEECCH------HHHHHHHHHHHHHHSSCCHH-HHHHHHHHHHHHHHHTTC
T ss_pred CccccCCCCeEEEEechhhcCCCccceEEEEecCH------HHHHHHHHHhcccccCCCHH-HHHHHHHHHhCcchhccc
Confidence 122 14579999999986 6889999998 55 66666554321111223333 3334444665431
Q ss_pred ----CchHHHHHHHHHHHHHHHHHHHHhc-CcEEecC-CC-----------CCceEEEccCCCCCcHHHHHHhHhcCCeE
Q 009673 369 ----SPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG-GS-----------DNHLVLVDLRPMGIDGARVEKILDMASIT 431 (529)
Q Consensus 369 ----~~~~~~~~~~i~~~a~~l~~~L~~~-G~~v~~~-gt-----------~~~~~~v~~~~~~i~~~~~~~~L~~~GI~ 431 (529)
....++.++.+.++++.+.+.|++. |+.+..+ ++ ...++|+++.. .+.+.++|+++||.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~----~~~~~~~l~~~gV~ 348 (391)
T 3bwn_A 273 ESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKE----ETDLVSELRRHKVM 348 (391)
T ss_dssp CCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESS----SCCHHHHHHHTTEE
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCc----HHHHHHHHHHCCEE
Confidence 3345778888999999999999885 6665432 11 11246777752 24577888899999
Q ss_pred EcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 432 LNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 432 v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+..+...| ..++++||++. .++++++++++.|+++++
T Consensus 349 v~pg~~fg----~~~~~iRis~~------~~~e~i~~~~~~L~~~~~ 385 (391)
T 3bwn_A 349 SRAGERCG----SDKKHVRVSML------SREDVFNVFLERLANMKL 385 (391)
T ss_dssp CEEGGGGT----CCTTEEEEESC------SCHHHHHHHHHHHHSCC-
T ss_pred EccCCCCC----CCCCEEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 96543222 13578999974 257899999999887654
No 208
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.79 E-value=6.9e-18 Score=176.21 Aligned_cols=216 Identities=18% Similarity=0.149 Sum_probs=147.2
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccc-cccc
Q 009673 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRR-VSGT 220 (529)
Q Consensus 142 g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~-i~~~ 220 (529)
+++...++| +++++++|.+. .+.++||++|+.+ +.++++|||+|++.++.|++.+.... .. ....
T Consensus 65 ~~p~~~~l~----~~la~l~g~~~-----~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~----~~~~~~~ 130 (400)
T 3nmy_A 65 HNPTRFAYE----RCVAALEGGTR-----AFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFE----RVRRRTA 130 (400)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHH----HTHHHHH
T ss_pred CCHHHHHHH----HHHHHHhCCCC-----EEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHH----HhhHhhc
Confidence 456666666 67888999763 3567899999987 67889999999999998865432110 00 1112
Q ss_pred cceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccccccccccccc
Q 009673 221 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (529)
Q Consensus 221 g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~ 298 (529)
|. +++.++.+ |++++++++++ ++++|++..++||+ ..|+++|+++|++||+++|+|++|..+...
T Consensus 131 g~--~~~~v~~~------d~~~l~~~i~~-~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~---- 197 (400)
T 3nmy_A 131 GL--DFSFVDLT------DPAAFKAAIRA-DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQ---- 197 (400)
T ss_dssp CC--EEEEECTT------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHC----
T ss_pred Ce--EEEEECCC------CHHHHHHHhcc-CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 43 55565432 89999999987 89999999888886 779999999999999999999998655331
Q ss_pred CCCCC-cccEEEecccccccCC---CCe-EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHH
Q 009673 299 ADPFK-YCDVVTTTTHKSLRGP---RGG-MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (529)
Q Consensus 299 ~~~~~-~aDiv~~S~hK~l~Gp---rgG-~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~ 373 (529)
.++. ++|+++.|+||++.|+ .|| +++..++ ++.+++...... ...+.+. ..+ +.+++.+ ..+.
T Consensus 198 -~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~-----~~~~~l~~~~~~-~g~~~~~--~~a-~~~l~~l--~~l~ 265 (400)
T 3nmy_A 198 -RPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNA-----ELAEQMAFLQNS-IGGVQGP--FDS-FLALRGL--KTLP 265 (400)
T ss_dssp -CGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCH-----HHHHHHHHHHHH-HCCBCCH--HHH-HHHHHHH--TTHH
T ss_pred -ChhhcCCcEEEecCccccCCCCCcceeEEEEeCCH-----HHHHHHHHHHHh-cCCCCCH--HHH-HHHHHhH--hHHH
Confidence 2333 6899999999999876 457 5665553 565555432111 0111111 111 1223332 2345
Q ss_pred HHHHHHHHHHHHHHHHHHhc-CcE
Q 009673 374 VYQNKVVSNCRALASRLVEL-GYK 396 (529)
Q Consensus 374 ~~~~~i~~~a~~l~~~L~~~-G~~ 396 (529)
.+.++..+|++.+.+.|++. .+.
T Consensus 266 ~r~~~~~~~a~~l~~~L~~~p~v~ 289 (400)
T 3nmy_A 266 LRMRAHCENALALAQWLETHPAIE 289 (400)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEe
Confidence 67788899999999999873 443
No 209
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.79 E-value=6e-18 Score=177.85 Aligned_cols=158 Identities=20% Similarity=0.170 Sum_probs=118.0
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCCCCEEEEcCCCCCccccccccccccccccccc
Q 009673 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (529)
Q Consensus 143 ~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~ 222 (529)
++...+++ +++++++|.+. .|.++||++|+..++.+++++||+|++..+.|.+...... ......|.
T Consensus 57 ~~~~~~l~----~~la~~~g~~~-----~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~----~~~~~~g~ 123 (421)
T 2ctz_A 57 NPTVDVLE----KRLAALEGGKA-----ALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFK----VTLKRLGI 123 (421)
T ss_dssp CHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHH----THHHHTTC
T ss_pred ChHHHHHH----HHHHHHhCCCc-----eEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHH----HHHHHcCC
Confidence 34455555 67888999873 3567999999999999999999999999998866532110 00123343
Q ss_pred eEEEEEc-ccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEeccc-cccccccccc
Q 009673 223 YFESMPY-RLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAH-ISGLVAASVV 298 (529)
Q Consensus 223 ~~~~v~~-~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah-~~Gli~~~~~ 298 (529)
+++.+ +.+ |++++++.+++ ++++|++..++||+ ..|+++|.++|+++|+++|+|++| ..|...
T Consensus 124 --~~~~~~~~~------d~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~---- 190 (421)
T 2ctz_A 124 --EVRFTSREE------RPEEFLALTDE-KTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLL---- 190 (421)
T ss_dssp --EEEECCTTC------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSC----
T ss_pred --EEEEECCCC------CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccC----
Confidence 66666 432 89999999987 89999998888775 789999999999999999999998 766321
Q ss_pred CCCCC-cccEEEecccccccCCC--CeEEEee
Q 009673 299 ADPFK-YCDVVTTTTHKSLRGPR--GGMIFFK 327 (529)
Q Consensus 299 ~~~~~-~aDiv~~S~hK~l~Gpr--gG~i~~~ 327 (529)
.++. ++|++++|+||++.||. .|++++.
T Consensus 191 -~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 191 -RPLAWGAALVTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp -CGGGGTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred -CccccCCeEEEECCcccccCCCCcEEEEEEe
Confidence 2233 58999999999997654 2544443
No 210
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.79 E-value=2.4e-17 Score=173.30 Aligned_cols=326 Identities=14% Similarity=0.081 Sum_probs=189.0
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc--CC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--~p 191 (529)
.+|.|++++...+... .. .... |. .+...++ .++++++++.+.+. .+..++|++|+..++.++. ..
T Consensus 60 ~~p~v~~a~~~~~~~~-~~--~~~~-~~-~~~~~~l----~~~la~~~~~~~~~---v~~~~gg~ea~~~a~~~~~~~~~ 127 (433)
T 1zod_A 60 CHPEIVSVIGEYAGKL-DH--LFSE-ML-SRPVVDL----ATRLANITPPGLDR---ALLLSTGAESNEAAIRMAKLVTG 127 (433)
T ss_dssp TCHHHHHHHHHHHHHC-CC--CCTT-CC-CHHHHHH----HHHHHHHSCTTCCE---EEEESCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhC-cc--cccc-cC-CHHHHHH----HHHHHHhCCCCcCE---EEEeCchHHHHHHHHHHHHHhhC
Confidence 4899999998877532 11 1111 11 2222333 36788899876542 2334567799999887653 24
Q ss_pred CCEEEEcCCCCCccccccc----cccccc--cccccceEEEEEcccCCC-C--------CCCCHHHHHHHhhh---cCCc
Q 009673 192 HDRIMGLDLPHGGHLSHGF----MTPKRR--VSGTSIYFESMPYRLDES-T--------GLVDYDMLEKTAIL---FRPK 253 (529)
Q Consensus 192 GD~Vl~~~~~~~g~~s~g~----~~~~~~--i~~~g~~~~~v~~~v~~~-~--------~~iD~d~le~~i~~---~~pk 253 (529)
+|+|++.++.+.|...... ..+... ....+ ...++++.... . +.+|+++|++.+++ .+++
T Consensus 128 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~ 205 (433)
T 1zod_A 128 KYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVG--SFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLA 205 (433)
T ss_dssp CCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTT--EEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEE
T ss_pred CCeEEEECCCcCCCChhHHhhcCCccccccCCCCCC--ceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeE
Confidence 5899999987644321000 000000 00112 24444332100 1 12479999999874 3567
Q ss_pred EEEEcCCCCC-C-CCC----HHHHHHHHHHhCCEEEEecccccccccccccCCCC---C-cccEEEecccccc-cCCCCe
Q 009673 254 LIIAGASAYP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSL-RGPRGG 322 (529)
Q Consensus 254 lIi~~~s~~p-~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~---~-~aDiv~~S~hK~l-~GprgG 322 (529)
+|+++..+++ + ..+ +++|+++|++||++||+|++|. |+...+.. ..+ . ..|++ |++|+| .|.|.|
T Consensus 206 ~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-~~g~~g~~-~~~~~~~~~~di~--s~sK~~~~G~~ig 281 (433)
T 1zod_A 206 AFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQT-GVGRTGTM-FACQRDGVTPDIL--TLSKTLGAGLPLA 281 (433)
T ss_dssp EEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSS-STHHHHTCCCSEE--EECHHHHTTSSCE
T ss_pred EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcCchH-hHHhhcCCCCCEE--EecccccCCCCee
Confidence 7887654443 2 334 9999999999999999999976 33222210 011 1 34665 566998 457779
Q ss_pred EEEeeCCCcchhHHHhhhcccccC--CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----C-c
Q 009673 323 MIFFKKDPVLGVELESAINNAVFP--GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----G-Y 395 (529)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~p--~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~----G-~ 395 (529)
++++++ ++.+.+....+. +..+++. ...++..++++.+... ++.+++.++++.+.+.|++. + +
T Consensus 282 ~~~~~~------~~~~~~~~~~~~~~~t~~~~~-~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~ 351 (433)
T 1zod_A 282 AIVTSA------AIEERAHELGYLFYTTHVSDP-LPAAVGLRVLDVVQRD---GLVARANVMGDRLRRGLLDLMERFDCI 351 (433)
T ss_dssp EEEECH------HHHHHHHHTTCCCCCTTTTCH-HHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred EEEEhH------HHHHhhccCCCCCCCCCCcCH-HHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 999987 677666542211 2233333 3344444567654332 34566777788888888662 2 2
Q ss_pred EEecCCCCCceEEEccCCC-------CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHH
Q 009673 396 KLVSGGSDNHLVLVDLRPM-------GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVA 468 (529)
Q Consensus 396 ~v~~~gt~~~~~~v~~~~~-------~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~ 468 (529)
..+.+ ...++++++... ..+...+.+.|.++||.+.. |.... .++.+||+.+.. .+++|+++
T Consensus 352 ~~~~~--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~~~~~-~~~~lRi~~~~~----~t~~~i~~ 420 (433)
T 1zod_A 352 GDVRG--RGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNI----VQLPG-MGGVFRIAPPLT----VSEDEIDL 420 (433)
T ss_dssp EEEEE--ETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCE----ECCTT-SCCEEEECCCTT----CCHHHHHH
T ss_pred EEEEE--EEEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEec----cCCCC-CCCEEEEECCcC----CCHHHHHH
Confidence 22222 234556665321 12356677777789999854 32111 247899986643 45899999
Q ss_pred HHHHHHHHHH
Q 009673 469 IADFIHEGVE 478 (529)
Q Consensus 469 la~~i~~~~~ 478 (529)
+++.|+++++
T Consensus 421 ~l~~l~~~l~ 430 (433)
T 1zod_A 421 GLSLLGQAIE 430 (433)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998875
No 211
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.79 E-value=9e-17 Score=170.16 Aligned_cols=330 Identities=15% Similarity=0.061 Sum_probs=188.0
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---- 189 (529)
.+|.|.+|+...+... .. .+ .....+... ..+++++++++.+.+ .+..++|++|+..++.++.
T Consensus 66 ~~p~v~~A~~~~~~~~-~~-~~---~~~~~~~~~----~la~~l~~~~~~~~~----v~~~~ggseA~~~al~~~~~~~~ 132 (452)
T 3n5m_A 66 GRKELAEAAYKQLQTL-SY-FP---MSQSHEPAI----KLAEKLNEWLGGEYV----IFFSNSGSEANETAFKIARQYYA 132 (452)
T ss_dssp CCHHHHHHHHHHHTTC-CC-CC---TTSEEHHHH----HHHHHHHHHHTSCEE----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-CC-cc---cccCCHHHH----HHHHHHHHhCCCCce----EEEeCchHHHHHHHHHHHHHHHH
Confidence 4799999998877432 11 11 111222222 334778888887653 2445677899999998876
Q ss_pred -C---CCCEEEEcCCCCCccccccc-----cccccccccccceEEEEEcccCCCC---------CCCCHHHHHHHhh---
Q 009673 190 -K---PHDRIMGLDLPHGGHLSHGF-----MTPKRRVSGTSIYFESMPYRLDEST---------GLVDYDMLEKTAI--- 248 (529)
Q Consensus 190 -~---pGD~Vl~~~~~~~g~~s~g~-----~~~~~~i~~~g~~~~~v~~~v~~~~---------~~iD~d~le~~i~--- 248 (529)
. ++|+|++.++.|.|...... ........-....+..++.+..... +..++++|++.++
T Consensus 133 ~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~ 212 (452)
T 3n5m_A 133 QKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWEL 212 (452)
T ss_dssp TTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHC
T ss_pred hcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcC
Confidence 5 88999999988644321000 0000000000001122222110000 0112899999987
Q ss_pred hcCCcEEEEcCC-CCCC-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CC-CCC-cccEEEecccccc-cC
Q 009673 249 LFRPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTTTTHKSL-RG 318 (529)
Q Consensus 249 ~~~pklIi~~~s-~~p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~-~~~-~aDiv~~S~hK~l-~G 318 (529)
..++++|+++.+ +|.+ ..+ +++|+++|++||++||+|++|. |+...+.. .. ... ..|+++ ++|++ .|
T Consensus 213 ~~~~~~vi~ep~~~n~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~g~~g~~~~~~~~~~~~di~t--~sK~l~~G 289 (452)
T 3n5m_A 213 SETIAAFIMEPIITGGGILMAPQDYMKAVHETCQKHGALLISDEVIC-GFGRTGKAFGFMNYDVKPDIIT--MAKGITSA 289 (452)
T ss_dssp GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTCCCSEEE--ECGGGGTT
T ss_pred CCCEEEEEEccccCCCCeeeCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcccccchhhhcCCCCCEEe--ecccccCC
Confidence 236778888865 4443 444 9999999999999999999964 43222211 00 011 356765 56987 46
Q ss_pred -CCCeEEEeeCCCcchhHHHhhhcc----cc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Q 009673 319 -PRGGMIFFKKDPVLGVELESAINN----AV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLV 391 (529)
Q Consensus 319 -prgG~i~~~~~~~~~~~l~~~i~~----~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~ 391 (529)
+|.|++++++ ++.+.+.. .. ..+..+++.....++ .++++.+.. +++.+++.++.+++.+.|.
T Consensus 290 ~~~ig~~~~~~------~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~---~~~~~~~~~~~~~l~~~L~ 359 (452)
T 3n5m_A 290 YLPLSATAVKR------EIYEAFKGKGEYEFFRHINTFGGNPAACALA-LKNLEIIEN---ENLIERSAQMGSLLLEQLK 359 (452)
T ss_dssp SSCCEEEEEEH------HHHGGGCSSSTTCSCCCCCSSTTCHHHHHHH-HHHHHHHHH---TTHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEECH------HHHHHHhhccCCCCccccCCCCCCHHHHHHH-HHHHHHHHh---ccHHHHHHHHHHHHHHHHH
Confidence 6779999988 78777743 11 112233333333333 346765432 2345666777777777776
Q ss_pred hc--C---cEEecCCCCCceEEEccCCCC-----Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCcc
Q 009673 392 EL--G---YKLVSGGSDNHLVLVDLRPMG-----ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTT 458 (529)
Q Consensus 392 ~~--G---~~v~~~gt~~~~~~v~~~~~~-----i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt 458 (529)
+. + +..+.+ ...++++++.... .+ ...+.+.|.+.||.+.....+. +..++.|||+.+..
T Consensus 360 ~~~~~~~~~~~~~~--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~---~~~~~~iRi~~~~~-- 432 (452)
T 3n5m_A 360 EEIGEHPLVGDIRG--KGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTT---AGYNNILTLAPPLV-- 432 (452)
T ss_dssp HHHTTCTTEEEEEE--SSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSS---TTCCCEEEECCCTT--
T ss_pred HHHhcCCCeEEEEE--EEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCccc---CCCCCEEEEECCCC--
Confidence 52 2 222222 1234444442111 01 1356777778999986543221 22357899986644
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 009673 459 RGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 459 ~g~~~~d~~~la~~i~~~~~ 478 (529)
.+++|++++++.|+++++
T Consensus 433 --~t~e~i~~~l~~l~~~l~ 450 (452)
T 3n5m_A 433 --ISSEEIAFVIGTLKTAME 450 (452)
T ss_dssp --CCHHHHHHHHHHHHHHHT
T ss_pred --CCHHHHHHHHHHHHHHHH
Confidence 458999999999988764
No 212
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.79 E-value=3.2e-17 Score=174.19 Aligned_cols=323 Identities=12% Similarity=0.012 Sum_probs=192.5
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--- 190 (529)
.+|.|.+|+...+.. +.....+ ++ ..+...+ .+++++++++...+. .+..+||++|+..++..+..
T Consensus 92 ~~p~v~~A~~~~~~~-~~~~~~~-~~--~~~~~~~----L~e~la~~~~~~~~~---v~~~~sGseA~~~Alk~a~~~~~ 160 (457)
T 3tfu_A 92 GHPALDQALTTQLRV-MNHVMFG-GL--THEPAAR----LAKLLVDITPAGLDT---VFFSDSGSVSVEVAAKMALQYWR 160 (457)
T ss_dssp TCHHHHHHHHHHHHH-CSCCCSS-SE--ECHHHHH----HHHHHHHHSSTTEEE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccCcccc-cc--CCHHHHH----HHHHHHHhCCCCcCE---EEEeCcHHHHHHHHHHHHHHHHH
Confidence 589999999887753 2211111 11 1222223 347888999766542 24456788999999887764
Q ss_pred ----CCC-EEEEcCCCCCcccccc------ccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh--cCCcEEEE
Q 009673 191 ----PHD-RIMGLDLPHGGHLSHG------FMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIA 257 (529)
Q Consensus 191 ----pGD-~Vl~~~~~~~g~~s~g------~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~--~~pklIi~ 257 (529)
||+ +|++.++.|.|..... ...+..........+..++++.+ .....|+++|++++++ .++++|++
T Consensus 161 ~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~d~~~le~~l~~~~~~~aavi~ 239 (457)
T 3tfu_A 161 GRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPR-DYDPAYSAAFEAQLAQHAGELAAVVV 239 (457)
T ss_dssp HTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCS-SCCHHHHHHHHHHHHHHGGGEEEEEE
T ss_pred hcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCc-ccCHHHHHHHHHHHHhCCCCEEEEEE
Confidence 665 8888887764321000 00000000000011223333322 1123588999999973 26778888
Q ss_pred cC-CCCCC--CCC----HHHHHHHHHHhCCEEEEecccccccccccccCCCCC----cccEEEecccccccC--CCCeEE
Q 009673 258 GA-SAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSLRG--PRGGMI 324 (529)
Q Consensus 258 ~~-s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~aDiv~~S~hK~l~G--prgG~i 324 (529)
.. .++++ ..+ +++|+++|++||++||+|++| .|+...+.. ..++ ..|++ |++|+|+| +|.|++
T Consensus 240 ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~-~g~gr~G~~-~a~~~~~~~pdii--t~sK~l~gG~~~lG~v 315 (457)
T 3tfu_A 240 EPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIA-TGFGRTGAL-FAADHAGVSPDIM--CVGKALTGGYLSLAAT 315 (457)
T ss_dssp CSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTT-TTTTTTSSS-STHHHHTCCCSEE--EECGGGGTTSSCCEEE
T ss_pred eCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCc-cCCccccch-hHhHhcCCCceEE--EEChhhhCCCcceEEE
Confidence 76 55543 222 899999999999999999995 443222211 1111 35777 56699977 689999
Q ss_pred EeeCCCcchhHHHhhhc---cc--ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----Cc
Q 009673 325 FFKKDPVLGVELESAIN---NA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GY 395 (529)
Q Consensus 325 ~~~~~~~~~~~l~~~i~---~~--~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~----G~ 395 (529)
++++ ++.+.+. .. ......+++.. ..++..++|+.+..+ ++.+++.++.+++.+.|++. ++
T Consensus 316 ~~~~------~i~~~~~~~~~~~~~~~~t~~~n~~-a~aaa~aaL~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~v 385 (457)
T 3tfu_A 316 LCTA------DVAHTISAGAAGALMHGPTFMANPL-ACAVSVASVELLLGQ---DWRTRITELAAGLTAGLDTARALPAV 385 (457)
T ss_dssp EEEH------HHHHHHHHSSSCSCCCCCTTTTCHH-HHHHHHHHHHHHHTS---CHHHHHHHHHHHHHHHHGGGGGSTTE
T ss_pred EEcH------HHHHHhhccCCCceeEecCCCcCHH-HHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 9998 6777663 11 11122333333 333333467765443 34666777788888888763 23
Q ss_pred EEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHH
Q 009673 396 KLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 475 (529)
Q Consensus 396 ~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~ 475 (529)
..+.+ ...+.++++.. ..+..++.+.|.+.||.+.. . .+.+||+.+.. .+++|++++++.|++
T Consensus 386 ~~vr~--~G~~~~i~l~~-~~~~~~~~~~l~~~Gv~v~~----~------~~~lRi~p~~~----~t~eei~~~l~~L~~ 448 (457)
T 3tfu_A 386 TDVRV--CGAIGVIECDR-PVDLAVATPAALDRGVWLRP----F------RNLVYAMPPYI----CTPAEITQITSAMVE 448 (457)
T ss_dssp EEEEE--CSSCEEEEESS-CCCHHHHHHHHHHTTEECCC----B------TTEEEECCCTT----CCHHHHHHHHHHHHH
T ss_pred eeeec--CCeEEEEEECC-cccHHHHHHHHHHCCeEEEe----c------CCEEEEECCCC----CCHHHHHHHHHHHHH
Confidence 22222 23455666643 34567788888888999842 1 36899986644 458999999999999
Q ss_pred HHHH
Q 009673 476 GVEI 479 (529)
Q Consensus 476 ~~~~ 479 (529)
++..
T Consensus 449 ~l~~ 452 (457)
T 3tfu_A 449 VARL 452 (457)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8864
No 213
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.78 E-value=2e-16 Score=168.05 Aligned_cols=330 Identities=12% Similarity=0.016 Sum_probs=186.1
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--- 190 (529)
.+|.|++|+...+.+. ...+.... ...+... ...++++++++.+.+. .+..++|++|+..++.++..
T Consensus 68 ~~p~v~~A~~~~~~~~-~~~~~~~~--~~~~~~~----~la~~l~~~~~~~~~~---v~~~~gGseA~~~al~~~~~~~~ 137 (460)
T 3gju_A 68 GRQKIADAIATQAKNL-AYYHAYVG--HGTEASI----TLAKMIIDRAPKGMSR---VYFGLSGSDANETNIKLIWYYNN 137 (460)
T ss_dssp CCHHHHHHHHHHHHHH-SCCCCCTT--CCCHHHH----HHHHHHHHHSCTTEEE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-cccccccc--cCCHHHH----HHHHHHHhhCCCCcCE---EEEeCchHHHHHHHHHHHHHHHH
Confidence 4799999988776432 11121111 1122222 3347788888766542 24456677999999988763
Q ss_pred -----CCCEEEEcCCCCCccccc-----cccccccccccccceEEEEEccc--CCCCCCCC--------HHHHHHHhhh-
Q 009673 191 -----PHDRIMGLDLPHGGHLSH-----GFMTPKRRVSGTSIYFESMPYRL--DESTGLVD--------YDMLEKTAIL- 249 (529)
Q Consensus 191 -----pGD~Vl~~~~~~~g~~s~-----g~~~~~~~i~~~g~~~~~v~~~v--~~~~~~iD--------~d~le~~i~~- 249 (529)
++|+|++.++.|.|.... +...+..........+..++++. ...+...| +++|+++++.
T Consensus 138 ~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~ 217 (460)
T 3gju_A 138 VLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAE 217 (460)
T ss_dssp HTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhc
Confidence 569999999876443210 00000000111111223344332 11111223 6889988873
Q ss_pred --cCCcEEEEcCCCCCC--CCC----HHHHHHHHHHhCCEEEEecccccccccccccC-CC-CC-cccEEEecccccccC
Q 009673 250 --FRPKLIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DP-FK-YCDVVTTTTHKSLRG 318 (529)
Q Consensus 250 --~~pklIi~~~s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~-~~-~~-~aDiv~~S~hK~l~G 318 (529)
.++++|+++.+++++ ..+ +++|+++|++||++||+|++|. |+...+... .. .. ..|+++ ++|+|+|
T Consensus 218 ~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pdi~t--~sK~l~g 294 (460)
T 3gju_A 218 GPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVT-GFGRLGTMFGSDHYGIKPDLIT--IAKGLTS 294 (460)
T ss_dssp CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSCHHHHHTCCCSEEE--ECGGGTT
T ss_pred CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcccccchHhhcCCCCCeee--eehhhcC
Confidence 356788887554443 333 8999999999999999999965 432222100 00 01 246765 4599976
Q ss_pred --CCCeEEEeeCCCcchhHHHhhhcc------c-ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 009673 319 --PRGGMIFFKKDPVLGVELESAINN------A-VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 389 (529)
Q Consensus 319 --prgG~i~~~~~~~~~~~l~~~i~~------~-~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~ 389 (529)
+|.|++++++ ++.+.+.. . ......+++.. ..++..++|+.+..+ ++.+++.++.+++.+.
T Consensus 295 G~~~lg~v~~~~------~i~~~~~~~~~~~~~~~~~~t~~~~~~-~~aaa~aal~~~~~~---~~~~~~~~~~~~~~~~ 364 (460)
T 3gju_A 295 AYAPLSGVIVAD------RVWQVLVQGSDKLGSLGHGWTYSAHPI-CVAAGVANLELIDEM---DLVTNAGETGAYFRAE 364 (460)
T ss_dssp TSSCCEEEEEEH------HHHHHHHHHHHHHCSCSCCCTTTTCHH-HHHHHHHHHHHHHHT---THHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECH------HHHHHHhcccccccccccCCCCCCCHH-HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHH
Confidence 7899999988 67776642 1 11222333333 333334467654332 3345555555556665
Q ss_pred HHh----cC-cEEecCCCCCceEEEccCCCC----------CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccC
Q 009673 390 LVE----LG-YKLVSGGSDNHLVLVDLRPMG----------IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSP 454 (529)
Q Consensus 390 L~~----~G-~~v~~~gt~~~~~~v~~~~~~----------i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~ 454 (529)
|.+ .+ +..+.+ ...++++++.... .....+.+.|.+.||.+.. +. ..+.|||+.+
T Consensus 365 l~~~l~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~~----~~~~iRi~~~ 434 (460)
T 3gju_A 365 LAKAVGGHKNVGEVRG--DGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRA----MP----QGDILGFAPP 434 (460)
T ss_dssp HHHHHTTSTTEEEEEE--ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEE----CS----SSCEEEECCC
T ss_pred HHHHHhcCCCeEEEee--eeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEec----CC----CCCEEEEECC
Confidence 533 22 222222 1234445443211 0134677778888998853 21 2478999866
Q ss_pred CCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 455 AMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 455 ~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
.. .+++|++++++.|+++++..
T Consensus 435 ~~----~t~e~i~~~l~~l~~~l~~~ 456 (460)
T 3gju_A 435 LC----LTREQADIVVSKTADAVKSV 456 (460)
T ss_dssp TT----CCHHHHHHHHHHHHHHHHHH
T ss_pred CC----CCHHHHHHHHHHHHHHHHHH
Confidence 44 45899999999999988643
No 214
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.78 E-value=1.2e-16 Score=168.08 Aligned_cols=313 Identities=13% Similarity=0.080 Sum_probs=183.2
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC--C
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--P 191 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--p 191 (529)
.+|.|.+|+...+......+|+ .+...++ ++++++.++ ..+. .+..+||++|+..++..+.. +
T Consensus 72 ~~p~v~~a~~~~~~~~~~~~~~-------~~~~~~l----~~~la~~~~-~~~~---v~~~~sGsea~~~ai~~a~~~~~ 136 (434)
T 3l44_A 72 AHPHITKAITTAAENGVLYGTP-------TALEVKF----AKMLKEAMP-ALDK---VRFVNSGTEAVMTTIRVARAYTG 136 (434)
T ss_dssp TCHHHHHHHHHHHHHCSCCSSC-------CHHHHHH----HHHHHHHCT-TCSE---EEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCcCCCCC-------CHHHHHH----HHHHHHhCC-CCCE---EEEeCchHHHHHHHHHHHHHhhC
Confidence 4899999998877543222222 2222233 367788886 3332 24456788999999887654 7
Q ss_pred CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCC-------------CCHHHHHHHhhhc--CCcEEE
Q 009673 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL-------------VDYDMLEKTAILF--RPKLII 256 (529)
Q Consensus 192 GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~-------------iD~d~le~~i~~~--~pklIi 256 (529)
+|+|++.++.|.+.... .....|.......++. ..+. .|+++|++++++. ++++|+
T Consensus 137 ~~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi 207 (434)
T 3l44_A 137 RTKIMKFAGCYHGHSDL-------VLVAAGSGPSTLGTPD--SAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAIL 207 (434)
T ss_dssp CCEEEEETTCCCCSSGG-------GGBC-------CCCBS--STTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEE
T ss_pred CCEEEEEcCccCCCcHH-------HHhhcCCcccccCCCC--cCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEE
Confidence 89999998876443211 1111121001001110 0011 2899999998742 466777
Q ss_pred EcCCCCCC--CCC----HHHHHHHHHHhCCEEEEecccccccccccccC-C-CCC-cccEEEecccccc-cCCCCeEEEe
Q 009673 257 AGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-D-PFK-YCDVVTTTTHKSL-RGPRGGMIFF 326 (529)
Q Consensus 257 ~~~s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~-~-~~~-~aDiv~~S~hK~l-~GprgG~i~~ 326 (529)
++.+++++ ..+ +++|+++|++||++||+|++|. |+ ..+... . .+. ..|+++ ++|++ +|+|.|++++
T Consensus 208 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~-g~-~~g~~~~~~~~~~~~di~t--~sK~~~~G~~iG~~~~ 283 (434)
T 3l44_A 208 VEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVIT-AF-RFMYGGAQDLLGVTPDLTA--LGKVIGGGLPIGAYGG 283 (434)
T ss_dssp ECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTT-TT-TSSSSCHHHHHTCCCSEEE--EEGGGGTTSSCEEEEE
T ss_pred EcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-ce-eccccHHHHHcCCCCCeee--hhhhhcCCcCeeeEEE
Confidence 77554433 455 9999999999999999999964 44 222110 0 001 246654 56988 5678899988
Q ss_pred eCCCcchhHHHhhhccc--cc-CCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCcEEec
Q 009673 327 KKDPVLGVELESAINNA--VF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLVS 399 (529)
Q Consensus 327 ~~~~~~~~~l~~~i~~~--~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~~v~~ 399 (529)
++ ++.+.+... .+ .+..++ +....++..++++.+.. +++.+++.++.+++.+.|++ .++....
T Consensus 284 ~~------~i~~~~~~~~~~~~~~t~~~-~~~a~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 353 (434)
T 3l44_A 284 KK------EIMEQVAPLGPAYQAGTMAG-NPASMASGIACLEVLQQ---EGLYEKLDELGATLEKGILEQAAKHNIDITL 353 (434)
T ss_dssp CH------HHHTTBTTTSSBCCCCTTTT-CHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred cH------HHHHhhccCCCcccCCCCCc-CHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 87 777776542 11 112223 33344444456776543 34556667777777777765 2432111
Q ss_pred CCCCCceEEEccCCCCC------------cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHH
Q 009673 400 GGSDNHLVLVDLRPMGI------------DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 467 (529)
Q Consensus 400 ~gt~~~~~~v~~~~~~i------------~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~ 467 (529)
.+ ...++++.+....+ ....+.+.|.+.||.+.. + ....+|+++ ..+++|++
T Consensus 354 ~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~-----~~~~~rl~~------~~t~e~i~ 417 (434)
T 3l44_A 354 NR-LKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAP----S-----KYEAWFLTT------EHTKEDIE 417 (434)
T ss_dssp EE-ETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCS----S-----TTCCEECCT------TCCHHHHH
T ss_pred Ee-eccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEee----c-----CCCcEEEec------ccCHHHHH
Confidence 11 23455555432211 124567778788999843 2 135688852 25689999
Q ss_pred HHHHHHHHHHHHH
Q 009673 468 AIADFIHEGVEIT 480 (529)
Q Consensus 468 ~la~~i~~~~~~~ 480 (529)
++++.|++++...
T Consensus 418 ~~l~~l~~~l~~~ 430 (434)
T 3l44_A 418 YTIEAVGRAFAAL 430 (434)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988643
No 215
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.77 E-value=8.5e-19 Score=184.70 Aligned_cols=322 Identities=10% Similarity=0.026 Sum_probs=200.1
Q ss_pred cceeEecCCCC--CcHHHHHHHhhhhhc-cCC-CCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCC
Q 009673 103 KSLELIASENF--TSRAVMEAVGSCLTN-KYS-EGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLS 176 (529)
Q Consensus 103 ~~i~L~asen~--~~~~V~eal~~~l~~-~y~-~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~--~~~~~~~~V~~~s 176 (529)
..|+|..+++. .++.+++++...+.. ... .+|+... .|.....++++...+++.+..+. +++ +|.+++
T Consensus 57 ~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~--~G~~~~~~lr~aia~~~~~~~~~~~~~~----~iv~t~ 130 (427)
T 2hox_A 57 CSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNP--VSNFISFELEKTIKELHEVVGNAAAKDR----YIVFGV 130 (427)
T ss_dssp CCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSS--CCTTCCHHHHHHHHHHHHHHTCBCCTTC----EEEEES
T ss_pred ceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCC--CCccchHHHHHHHHHHHHHhCCcCCCCC----EEEEeC
Confidence 45778777764 346777787766531 111 1243311 02112456776666666655443 343 566688
Q ss_pred hH-HHHHHHHHhh--------cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHh
Q 009673 177 GS-PANFEVYTAI--------LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTA 247 (529)
Q Consensus 177 Gs-~A~~~~l~al--------l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i 247 (529)
|+ +++..++.++ ++|||+|++++|.|.++.. .+...|. +++. +.+|+++|++.+
T Consensus 131 G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~-------~~~d~~~l~~~~ 193 (427)
T 2hox_A 131 GVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFRE--------QTKYFDK--KGYV-------WAGNAANYVNVS 193 (427)
T ss_dssp HHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHH--------HHHHSCB--TTEE-------EEEEGGGGTTCS
T ss_pred CHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHH--------HHHHcCC--eeee-------ecCCHHHHHHhh
Confidence 77 9999999999 9999999999998754321 2233343 2222 345677888877
Q ss_pred hhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEecccccccccccccCCCC-CcccEEEecccccc--cCCCCe
Q 009673 248 ILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-KYCDVVTTTTHKSL--RGPRGG 322 (529)
Q Consensus 248 ~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~-~~aDiv~~S~hK~l--~GprgG 322 (529)
++ ++|+|++++|+||+ ..+ + +++ ++..+.|.+++.... . ...+ ...+++++|+||++ +|.|.|
T Consensus 194 ~~-~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~~--s--~~~~~~~~~i~~~S~SK~~g~~G~RiG 261 (427)
T 2hox_A 194 NP-EQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPHY--T--PIKYKADEDILLFTMSKFTGHSGSRFG 261 (427)
T ss_dssp CG-GGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTTT--S--CCCSCBCCSEEEEEHHHHTSCGGGCCE
T ss_pred cC-CceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCCC--C--ccccCCCceEEEEeChhcCCCCCceEE
Confidence 76 78999999999997 555 3 333 677888887542110 0 0111 24679999999986 688999
Q ss_pred EEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhc----------CchHHHHHHHHHHHHHHHHHHHHh
Q 009673 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ----------SPEFKVYQNKVVSNCRALASRLVE 392 (529)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~----------~~~~~~~~~~i~~~a~~l~~~L~~ 392 (529)
|++++++ ++.+.+.........+.+...+.++ ..+|+... ...++..++++.++++.+.+.|++
T Consensus 262 ~~~~~~~-----~l~~~l~~~~~~~~~~~~~~~q~a~-~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 335 (427)
T 2hox_A 262 WALIKDE-----SVYNNLLNYMTKNTEGTPRETQLRS-LKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQ 335 (427)
T ss_dssp EEEECCH-----HHHHHHHHHHHHHTSSCCHHHHHHH-HHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEECCH-----HHHHHHHHHHHhcCCCCCHHHHHHH-HHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999532 6777665543222234444444443 33554321 223356677888899999999988
Q ss_pred c-CcEE--ec-C----------CCCCceEEEccCCCCCcHHH-HHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCc
Q 009673 393 L-GYKL--VS-G----------GSDNHLVLVDLRPMGIDGAR-VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMT 457 (529)
Q Consensus 393 ~-G~~v--~~-~----------gt~~~~~~v~~~~~~i~~~~-~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~t 457 (529)
. |+.+ +. + .....++|+++.. +..+ +..+|+++||.+..+...+ . .+++|||++.
T Consensus 336 ~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~---~~~~~~~~ll~~~gI~v~pg~~f~---~-~~~~~Ris~~--- 405 (427)
T 2hox_A 336 SDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW---EEDKDCYQTFQNGRINTQNGVGFE---A-SSRYVRLSLI--- 405 (427)
T ss_dssp SSSEECCCCCSCEEETTTTEEECCCCSEEEEEECS---GGGCSHHHHHHHTTEECEEGGGGT---S-CTTEEEEECS---
T ss_pred CcCccccccccccccccccccCCCCceEEEEECCC---cHHHHHHHHHHHCCEEEcCCCccC---C-CCCEEEEEec---
Confidence 5 7765 21 1 1124567777753 2333 4555678999995543221 1 4678999974
Q ss_pred cCCCCHHHHHHHHHHHHHHHH
Q 009673 458 TRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 458 t~g~~~~d~~~la~~i~~~~~ 478 (529)
.+++++++..+.|.+++.
T Consensus 406 ---~~~e~l~~~l~~l~~~~~ 423 (427)
T 2hox_A 406 ---KTQDDFDQLMYYLKDMVK 423 (427)
T ss_dssp ---SCHHHHHHHHHHHHHHHT
T ss_pred ---CCHHHHHHHHHHHHHHHh
Confidence 257889999988887763
No 216
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.77 E-value=1.2e-16 Score=169.80 Aligned_cols=327 Identities=11% Similarity=0.014 Sum_probs=185.1
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--- 190 (529)
.+|.|++|+...+.+. ..++...++ ..+.. ....++++++++.+.+. .+..++|++|+..++.++.+
T Consensus 67 ~~p~v~~A~~~~~~~~-~~~~~~~~~--~~~~~----~~la~~l~~~~~~~~~~---v~~~~ggseA~~~al~~~~~~~~ 136 (459)
T 4a6r_A 67 GRKDFAEAARRQMEEL-PFYNTFFKT--THPAV----VELSSLLAEVTPAGFDR---VFYTNSGSESVDTMIRMVRRYWD 136 (459)
T ss_dssp CCHHHHHHHHHHHHHC-SCCCTTSSS--CCHHH----HHHHHHHHHHSCTTCCE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-ccccccccc--CCHHH----HHHHHHHHHhCCCCCCE---EEEeCchHHHHHHHHHHHHHHHH
Confidence 4799999998877532 112221111 12222 23447888898876653 24456677999999988865
Q ss_pred -----CCCEEEEcCCCCCccccc-----cccccccccccccceEEEEEccc--CCCCCCCC--------HHHHHHHhhh-
Q 009673 191 -----PHDRIMGLDLPHGGHLSH-----GFMTPKRRVSGTSIYFESMPYRL--DESTGLVD--------YDMLEKTAIL- 249 (529)
Q Consensus 191 -----pGD~Vl~~~~~~~g~~s~-----g~~~~~~~i~~~g~~~~~v~~~v--~~~~~~iD--------~d~le~~i~~- 249 (529)
++|+|++.++.|.|.... +...++.........+..++++. +...+ .| +++|+++++.
T Consensus 137 ~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~ 215 (459)
T 4a6r_A 137 VQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEI 215 (459)
T ss_dssp HTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHc
Confidence 579999999876443210 00000000000111123334322 10112 45 7889988874
Q ss_pred --cCCcEEEEcCCCCCC--CCC----HHHHHHHHHHhCCEEEEecccccccccccccC-CC-CC-cccEEEecccccccC
Q 009673 250 --FRPKLIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DP-FK-YCDVVTTTTHKSLRG 318 (529)
Q Consensus 250 --~~pklIi~~~s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~-~~-~~-~aDiv~~S~hK~l~G 318 (529)
.++++|+++..++++ ..+ +++|+++|++||++||+|++|. |+...+... .. .. ..|++++ +|+|+|
T Consensus 216 ~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~G~~~~~~~~~~~pdi~t~--sK~l~g 292 (459)
T 4a6r_A 216 GADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVIC-GFGRTGEWFGHQHFGFQPDLFTA--AKGLSS 292 (459)
T ss_dssp CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEEE--CGGGGT
T ss_pred CCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcccccchHhhcCCCCCeeeh--hhhhcC
Confidence 255677776443332 344 8999999999999999999964 432222100 00 01 3577754 599865
Q ss_pred --CCCeEEEeeCCCcchhHHHhhhcc---cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHH-HHHHHHHHHH-H
Q 009673 319 --PRGGMIFFKKDPVLGVELESAINN---AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV-SNCRALASRL-V 391 (529)
Q Consensus 319 --prgG~i~~~~~~~~~~~l~~~i~~---~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~-~~a~~l~~~L-~ 391 (529)
+|.|++++++ ++.+.+.. ....+..+++.....++ .++|+.+..+ ++.+++. ++.+++.+.| +
T Consensus 293 g~~~lg~v~~~~------~i~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~~---~~~~~~~~~~~~~~~~~l~~ 362 (459)
T 4a6r_A 293 GYLPIGAVFVGK------RVAEGLIAGGDFNHGFTYSGHPVCAAVA-HANVAALRDE---GIVQRVKDDIGPYMQKRWRE 362 (459)
T ss_dssp TSSCCEEEEECH------HHHHHHHHHCTTHHHHHHCSCHHHHHHH-HHHHHHHHHT---CHHHHHHHTHHHHHHHHHHH
T ss_pred CCCCccceeeCH------HHHHHhhcCCCcccCCCCCCCHHHHHHH-HHHHHHHhcc---hHHHHHHHHHHHHHHHHHHH
Confidence 7889999987 67666652 11111123333333333 3467654322 3345555 5566666666 3
Q ss_pred h---c-CcEEecCCCCCceEEEccCCCCC----------cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCc
Q 009673 392 E---L-GYKLVSGGSDNHLVLVDLRPMGI----------DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMT 457 (529)
Q Consensus 392 ~---~-G~~v~~~gt~~~~~~v~~~~~~i----------~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~t 457 (529)
. . ++..+.+ ...++.+++..... ....+.+.|.+.||.+.. + .+.|||+.+..
T Consensus 363 ~l~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~------g~~iRi~~~~~- 429 (459)
T 4a6r_A 363 TFSRFEHVDDVRG--VGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRA----C------GDHIVSAPPLV- 429 (459)
T ss_dssp HHTTCTTEEEEEE--ETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEE----E------TTEEEECCCTT-
T ss_pred HHhcCCCeEEEEE--EEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEec----C------CCEEEEECCCC-
Confidence 3 2 2222222 12344454432110 145577777788999843 2 16899986654
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHH
Q 009673 458 TRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 458 t~g~~~~d~~~la~~i~~~~~~~ 480 (529)
.+++|++++++.|++++...
T Consensus 430 ---~t~e~i~~~l~~l~~~l~~~ 449 (459)
T 4a6r_A 430 ---MTRAEVDEMLAVAERCLEEF 449 (459)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHHHHHHH
Confidence 45899999999999988754
No 217
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.76 E-value=4.6e-16 Score=166.06 Aligned_cols=327 Identities=11% Similarity=-0.005 Sum_probs=191.3
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--- 190 (529)
.+|.|.+|+...+.. +..+++. ....+...+ ..++++++++.+.+. .+..+||++|+..++..+..
T Consensus 71 ~~p~v~~A~~~~l~~-~~~~~~~---~~~~~~~~~----la~~l~~~~~~~~~~---v~~~~sGseA~~~Aik~a~~~~~ 139 (476)
T 3i5t_A 71 GRREIVDAMAHQAMV-LPYASPW---YMATSPAAR----LAEKIATLTPGDLNR---IFFTTGGSTAVDSALRFSEFYNN 139 (476)
T ss_dssp CCHHHHHHHHHHHHH-CCCCCTT---TCBCHHHHH----HHHHHHTTSSTTCCE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccCcccC---ccCCHHHHH----HHHHHHhcCCCCcCE---EEEeCchHHHHHHHHHHHHHHHH
Confidence 589999999887753 3222221 111232333 347888888765542 24457788999999988753
Q ss_pred -----CCCEEEEcCCCCCccccc-----cccccccccccccceEEEEEcccCCCCCCCC--------HHHHHHHhhh---
Q 009673 191 -----PHDRIMGLDLPHGGHLSH-----GFMTPKRRVSGTSIYFESMPYRLDESTGLVD--------YDMLEKTAIL--- 249 (529)
Q Consensus 191 -----pGD~Vl~~~~~~~g~~s~-----g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD--------~d~le~~i~~--- 249 (529)
.+++|++.++.|.|.... +...++.........+..++++.....+..| +++|+++++.
T Consensus 140 ~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~ 219 (476)
T 3i5t_A 140 VLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGP 219 (476)
T ss_dssp HTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCG
T ss_pred hcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCC
Confidence 367999998876443210 0000000000001112333333211111222 7889988874
Q ss_pred cCCcEEEEcCCCCCC--CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-C-CCC-cccEEEecccccccC-
Q 009673 250 FRPKLIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-D-PFK-YCDVVTTTTHKSLRG- 318 (529)
Q Consensus 250 ~~pklIi~~~s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~-~~~-~aDiv~~S~hK~l~G- 318 (529)
.++++|+++.+++++ ..+ +++|+++|++||++||+|++|. |+...|.. . . .+. ..|++++ +|+++|
T Consensus 220 ~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~-g~gr~G~~~~~~~~~~v~pdi~t~--sK~l~~G 296 (476)
T 3i5t_A 220 DTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVT-GFGRCGEWFASEKVFGVVPDIITF--AKGVTSG 296 (476)
T ss_dssp GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSCHHHHTTCCCCSEEEE--CGGGGTT
T ss_pred CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccccCceeeecccCCCcchhhh--hhhhcCC
Confidence 256788887554432 333 8999999999999999999964 44222211 0 0 111 3577764 599854
Q ss_pred -CCCeEEEeeCCCcchhHHHhhhccc-------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673 319 -PRGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (529)
Q Consensus 319 -prgG~i~~~~~~~~~~~l~~~i~~~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L 390 (529)
++.|++++++ ++.+.+... ...+..+++.. ..+|..++|+.+.. +++.+++.++.+++.+.|
T Consensus 297 ~~plg~v~~~~------~i~~~~~~~~~~~~~~~~~~t~~~np~-a~aAa~aaL~~~~~---~~~~~~~~~~~~~l~~~L 366 (476)
T 3i5t_A 297 YVPLGGLAISE------AVLARISGENAKGSWFTNGYTYSNQPV-ACAAALANIELMER---EGIVDQAREMADYFAAAL 366 (476)
T ss_dssp SSCCEEEEECH------HHHHTTSGGGCTTCEECCCCTTTTCHH-HHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHH
T ss_pred CcCeEEEEECH------HHHHHHhcCCcccccccccCCCCcCHH-HHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHH
Confidence 7889999987 787777542 11223333333 34443446765533 245677777888888888
Q ss_pred HhcC----cEEecCCCCCceEEEccCCCCC----------cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCC
Q 009673 391 VELG----YKLVSGGSDNHLVLVDLRPMGI----------DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM 456 (529)
Q Consensus 391 ~~~G----~~v~~~gt~~~~~~v~~~~~~i----------~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~ 456 (529)
++.+ +..+.+ ...++.+++..... ....+.+.|.+.||.+... .+.|||+.+..
T Consensus 367 ~~l~~~~~v~~v~~--~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----------g~~iRi~p~l~ 434 (476)
T 3i5t_A 367 ASLRDLPGVAETRS--VGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPL----------GDLCVISPPLI 434 (476)
T ss_dssp HTTTTSTTEEEEEE--ETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEE----------TTEEEECCCTT
T ss_pred HHHhcCCCeEEEEe--cCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEec----------CCEEEEECCCC
Confidence 7632 222221 12344555543211 1345667777889998431 26899986643
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 457 TTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 457 tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
.+++|++++++.|++++...
T Consensus 435 ----~t~e~i~~~l~~l~~~l~~~ 454 (476)
T 3i5t_A 435 ----ISRAQIDEMVAIMRQAITEV 454 (476)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHHHHHHH
Confidence 45899999999999998754
No 218
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.76 E-value=3.3e-19 Score=186.54 Aligned_cols=236 Identities=9% Similarity=0.060 Sum_probs=149.2
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC----CCCEEEEcCCCCCcccccccccccccccc
Q 009673 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK----PHDRIMGLDLPHGGHLSHGFMTPKRRVSG 219 (529)
Q Consensus 144 ~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~----pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~ 219 (529)
+..-.+|+....|+.+++|++... . -+.++.+|.++.+++++.++ +||.|+++.-.|.+.+ +++.+
T Consensus 94 ~~~~~~e~~~~~~~~~~lGlp~~~-~-~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~--------kAl~l 163 (450)
T 3bc8_A 94 SLLNKITNSLVLNVIKLAGVHSVA-S-CFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCF--------KSMVT 163 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCC-E-EEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHH--------HHHHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCc-e-EEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHH--------HHHHH
Confidence 345577878889999999998642 1 13334454344434444433 3899998876554332 35566
Q ss_pred ccceEEEEEcccCCCCCCCCHHHHHHHhhhcC--CcEEE-EcCCCCC--CCCCHHHHHHHHHHhCCEEEEeccccccccc
Q 009673 220 TSIYFESMPYRLDESTGLVDYDMLEKTAILFR--PKLII-AGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVA 294 (529)
Q Consensus 220 ~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~--pklIi-~~~s~~p--~~~d~~~i~~ia~~~g~~livD~ah~~Gli~ 294 (529)
.|.....+....+.+.+.+|+++|+++|+++. .++++ .+.+.|+ ...|+++|+++|++||+||++|+||......
T Consensus 164 ~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~ 243 (450)
T 3bc8_A 164 AGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSK 243 (450)
T ss_dssp TTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHH
T ss_pred cCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhh
Confidence 77643333322223457899999999998753 23444 4444554 3789999999999999999999998754332
Q ss_pred ccccC-CCC--CcccEEEecccccccCCCC-eEEEeeCCCcchhHHHhhhcccccCCCCC-CChHHHHHHHHHHHHHhcC
Q 009673 295 ASVVA-DPF--KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQG-GPHNHTIGGLAVCLKHAQS 369 (529)
Q Consensus 295 ~~~~~-~~~--~~aDiv~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~p~~~g-~p~~~~iaala~al~~~~~ 369 (529)
....+ ..+ +++|+++.|+|||+..|-+ ++++++++ ++.+++... +++.+. +|. ..++..+.....
T Consensus 244 ~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~-----~~~~~~~~~-~~g~~s~Sps----L~l~~~l~~~G~ 313 (450)
T 3bc8_A 244 CMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNE-----PFIQDISKM-YPGRASASPS----LDVLITLLSLGC 313 (450)
T ss_dssp HHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCH-----HHHHHHHHH-SCSCBCSHHH----HHHHHHHHHHHH
T ss_pred hHhHHHHHhcccCCCEEEECCccCCCchhccEEEEecCH-----HHHHHHHHH-hhcCCcccHH----HHHHHHHHHHHH
Confidence 11111 122 4699999999999988877 66666653 555555432 344332 222 223334433334
Q ss_pred chHHHHHHHHHHHHHHHHHHHHh-c---CcEEec
Q 009673 370 PEFKVYQNKVVSNCRALASRLVE-L---GYKLVS 399 (529)
Q Consensus 370 ~~~~~~~~~i~~~a~~l~~~L~~-~---G~~v~~ 399 (529)
.+|.+..++..++++++++.|++ . |+.++.
T Consensus 314 ~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~ 347 (450)
T 3bc8_A 314 SGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQ 347 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecC
Confidence 45677777778889999999876 3 777664
No 219
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.76 E-value=2.3e-16 Score=166.89 Aligned_cols=319 Identities=12% Similarity=0.036 Sum_probs=180.2
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--- 190 (529)
.+|.|.+|+...+... ..+++ .....+...+ ..++++++++...+. .+..+||++|+..++.++..
T Consensus 61 ~~p~v~~A~~~~~~~~-~~~~~---~~~~~~~~~~----la~~l~~~~~~~~~~---v~~~~sGseA~~~al~~~~~~~~ 129 (448)
T 3dod_A 61 RKKELDDAIKKQLGKI-AHSTL---LGMTNVPATQ----LAETLIDISPKKLTR---VFYSDSGAEAMEIALKMAFQYWK 129 (448)
T ss_dssp SCHHHHHHHHHHHTTC-SCCCC---SSSEEHHHHH----HHHHHHHHSCTTEEE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-cCccc---cccCCHHHHH----HHHHHHHhCCCCCCE---EEEeCchHHHHHHHHHHHHHHHH
Confidence 4799999998877432 21111 1111232233 347888888655432 24456788999999988765
Q ss_pred -CC----CEEEEcCCCCCccccccccccccccccccce----------EEEEEcccCCCCCC-----------CCHHHHH
Q 009673 191 -PH----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY----------FESMPYRLDESTGL-----------VDYDMLE 244 (529)
Q Consensus 191 -pG----D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~----------~~~v~~~v~~~~~~-----------iD~d~le 244 (529)
+| |+|++.++.|.|.... .....+.. .....++.. +.+. .|+++|+
T Consensus 130 ~~G~~~~~~vi~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le 201 (448)
T 3dod_A 130 NIGKPEKQKFIAMKNGYHGDTIG-------AVSVGSIELFHHVYGPLMFESYKAPIP-YVYRSESGDPDECRDQCLRELA 201 (448)
T ss_dssp HTTCTTCCEEEEEC------------------------------------CEEECCC-CCTTSSSCCHHHHHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCCCCCccHH-------HHHhcCCccccccccCCCCCceEeCCC-ccccCCccchhhhhHHHHHHHH
Confidence 55 9999999876443211 11111110 011122221 1122 2589999
Q ss_pred HHhh--hcCCcEEEEcCC--CCCC-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CCC-CC-cccEEEecc
Q 009673 245 KTAI--LFRPKLIIAGAS--AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADP-FK-YCDVVTTTT 312 (529)
Q Consensus 245 ~~i~--~~~pklIi~~~s--~~p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~~-~~-~aDiv~~S~ 312 (529)
++++ ..++++|++... ++++ ..+ +++|+++|++||++||+|++|. |+...+.. ... +. ..|+++ +
T Consensus 202 ~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g~g~~g~~~a~~~~~~~~di~t--~ 278 (448)
T 3dod_A 202 QLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVAT-GFGRTGKMFACEHENVQPDLMA--A 278 (448)
T ss_dssp HHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEE--E
T ss_pred HHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcccchhhhhhcCCCCCEEE--e
Confidence 9987 225677777754 3333 333 8999999999999999999965 43222211 000 11 256765 5
Q ss_pred ccccc-C-CCCeEEEeeCCCcchhHHHhhhcc-------cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 009673 313 HKSLR-G-PRGGMIFFKKDPVLGVELESAINN-------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (529)
Q Consensus 313 hK~l~-G-prgG~i~~~~~~~~~~~l~~~i~~-------~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a 383 (529)
+|++. | .|.|++++++ ++.+.+.. ....+..+++.. ..++..++|+.+..+ ++.+++.++.
T Consensus 279 sK~l~~G~~~ig~v~~~~------~~~~~~~~~~~~~~~~~~~~t~~~~~~-~~aaa~aal~~~~~~---~~~~~~~~~~ 348 (448)
T 3dod_A 279 GKGITGGYLPIAVTFATE------DIYKAFYDDYENLKTFFHGHSYTGNQL-GCAVALENLALFESE---NIVEQVAEKS 348 (448)
T ss_dssp CGGGGTTSSCCEEEEEEH------HHHHTTCSCGGGCCCCCCCCTTTTCHH-HHHHHHHHHHHHHHT---THHHHHHHHH
T ss_pred cccccCCcCceEEEEECH------HHHHHhhhccccCCcccccCCCCcCHH-HHHHHHHHHHHHhcc---cHHHHHHHHH
Confidence 59984 5 3889999998 78777754 222222333333 334434467654322 3455666666
Q ss_pred HHHHHHHHhc-Cc---EEecCCCCCceEEEccCCCCCc----------HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeE
Q 009673 384 RALASRLVEL-GY---KLVSGGSDNHLVLVDLRPMGID----------GARVEKILDMASITLNKNSVPGDKSALVPGGI 449 (529)
Q Consensus 384 ~~l~~~L~~~-G~---~v~~~gt~~~~~~v~~~~~~i~----------~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~i 449 (529)
+++.+.|.+. ++ ..+.+ ...++++++.....+ ...+.+.|.+.||.+. |+ .+.|
T Consensus 349 ~~~~~~l~~l~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~------~~~i 416 (448)
T 3dod_A 349 KKLHFLLQDLHALPHVGDIRQ--LGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTR----PL------GDVI 416 (448)
T ss_dssp HHHHHHHHHHTTSTTEEEEEE--ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECC----EE------TTEE
T ss_pred HHHHHHHHHHhcCCCeEEEEe--eeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEe----cc------CCEE
Confidence 7777776651 22 22211 123555555321100 2567777778899983 32 2689
Q ss_pred EEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 450 RIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 450 Rig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
||+.+.. .+++|++++++.|++++...
T Consensus 417 Ri~~~~~----~t~e~i~~~l~~l~~~l~~~ 443 (448)
T 3dod_A 417 AFLPPLA----STAEELSEMVAIMKQAIHEV 443 (448)
T ss_dssp EECCCTT----CCHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCC----CCHHHHHHHHHHHHHHHHHH
Confidence 9976543 56899999999999988743
No 220
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.75 E-value=1.7e-15 Score=159.03 Aligned_cols=317 Identities=14% Similarity=0.061 Sum_probs=184.2
Q ss_pred ceeEecCC--C---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673 104 SLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (529)
Q Consensus 104 ~i~L~ase--n---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs 178 (529)
.|++..+- + ..+|.|.+|+...+......++ ..+... ...++++++++ +.+. .+..++|+
T Consensus 54 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-------~~~~~~----~la~~l~~~~~-~~~~---v~~~~ggs 118 (427)
T 3fq8_A 54 YIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGA-------PCALEN----VLAEMVNDAVP-SIEM---VRFVNSGT 118 (427)
T ss_dssp EEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSS-------CCHHHH----HHHHHHHHHST-TCSE---EEEESSHH
T ss_pred EEECCCchhhhccCCCCHHHHHHHHHHHHhCCCcCC-------CCHHHH----HHHHHHHHhCC-CCCE---EEEeCCHH
Confidence 46665442 2 2589999999887753211111 122222 33477888887 4432 24456777
Q ss_pred HHHHHHHHhh--cCCCCEEEEcCCCCCccccccccccccccccccceE-----------------EEEEcccCCCCCCCC
Q 009673 179 PANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF-----------------ESMPYRLDESTGLVD 239 (529)
Q Consensus 179 ~A~~~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~-----------------~~v~~~v~~~~~~iD 239 (529)
+|+..++... ...+|+|++.++.+.|..... ....+... .++.++. -|
T Consensus 119 ea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d 185 (427)
T 3fq8_A 119 EACMAVLRIMRAYTGRDKIIKFEGCYHGHADMF-------LVKAGSGVATLGLPSSPGVPKKTTANTLTTPY------ND 185 (427)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGG-------CSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET------TC
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHH-------HHhcCCcccccCCCCCCCCCCcccCceeecCC------CC
Confidence 9999888432 124578998887764432111 01111100 0111111 18
Q ss_pred HHHHHHHhhhc--CCcEEEEcCCCCCC--CCC----HHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEE
Q 009673 240 YDMLEKTAILF--RPKLIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVV 308 (529)
Q Consensus 240 ~d~le~~i~~~--~pklIi~~~s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv 308 (529)
+++|+++++++ ++++|+++.+++++ ..+ +++|+++|++||++||+|++|. |+ ..+... .... ..|++
T Consensus 186 ~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~-~~g~~~~~~~~~~~~di~ 263 (427)
T 3fq8_A 186 LEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVIT-GF-RIAYGGVQEKFGVTPDLT 263 (427)
T ss_dssp HHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-BT-TTBTTHHHHHTTCCCSEE
T ss_pred HHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-cc-ccCcchhhHhcCCCCChh
Confidence 99999999764 56778887554332 555 9999999999999999999975 55 222110 0011 24665
Q ss_pred Eecccccc-cCCCCeEEEeeCCCcchhHHHhhhcccc---cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673 309 TTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAV---FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (529)
Q Consensus 309 ~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~---~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~ 384 (529)
+ ++|++ +|+|.|++++++ ++.+.+.... ..+..++ +...+++..++++.+..+ ++.+++.++.+
T Consensus 264 t--~sK~~~~G~~~G~~~~~~------~~~~~~~~~~~~~~~~t~~~-~~~~~aa~~aal~~~~~~---~~~~~~~~~~~ 331 (427)
T 3fq8_A 264 T--LGKIIGGGLPVGAYGGKR------EIMQLVAPAGPMYQAGTLSG-NPLAMTAGIKTLELLRQP---GTYEYLDQITK 331 (427)
T ss_dssp E--ECGGGGTTSSCEEEEECH------HHHTTBTTTSSBCCCCTTTT-CHHHHHHHHHHHHHHTST---THHHHHHHHHH
T ss_pred h--hhhhhhCCcceEEEEEcH------HHHHhhccCCCccccCCCCc-CHHHHHHHHHHHHHHHhc---CHHHHHHHHHH
Confidence 4 55998 567889999987 7777765421 1111222 344444444567765443 44566677777
Q ss_pred HHHHHHHh----cCcEEecCCCCCceEEEccCCCCCc------------HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCe
Q 009673 385 ALASRLVE----LGYKLVSGGSDNHLVLVDLRPMGID------------GARVEKILDMASITLNKNSVPGDKSALVPGG 448 (529)
Q Consensus 385 ~l~~~L~~----~G~~v~~~gt~~~~~~v~~~~~~i~------------~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~ 448 (529)
.+.+.|.+ .++.....+ ...+.++.+....+. ...+.+.|.+.||.+.. +. ...
T Consensus 332 ~~~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~----~~-----~~r 401 (427)
T 3fq8_A 332 RLSDGLLAIAQETGHAACGGQ-VSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAP----SQ-----FEA 401 (427)
T ss_dssp HHHHHHHHHHHHTTCCCEEEE-ETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCS----ST-----TSC
T ss_pred HHHHHHHHHHHhCCCCeEEEE-eeeEEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEec----CC-----CCC
Confidence 77777765 233221111 234555555432221 34577778888999843 21 124
Q ss_pred EEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 449 IRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 449 iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+|++ . ..+++|++++++.|+++++
T Consensus 402 ~~~~--~----~~t~e~i~~~l~~l~~~l~ 425 (427)
T 3fq8_A 402 GFTS--L----AHTEEDIDATLAAARTVMS 425 (427)
T ss_dssp EECC--T----TCCHHHHHHHHHHHHHHHH
T ss_pred EEee--C----cCCHHHHHHHHHHHHHHHH
Confidence 5543 2 2568999999999998875
No 221
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.75 E-value=2e-16 Score=166.28 Aligned_cols=321 Identities=14% Similarity=0.075 Sum_probs=186.4
Q ss_pred cceeEecCC--C---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673 103 KSLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~ase--n---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG 177 (529)
..|++.++- + ..+|.|.+|+...+......+++ .+...++ +++++++++ ..+. .+..+||
T Consensus 54 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~-------~~~~~~l----~~~la~~~~-~~~~---v~~~~~G 118 (429)
T 3k28_A 54 EYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAP-------TEIENKL----AKLVIERVP-SIEI---VRMVNSG 118 (429)
T ss_dssp EEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSSC-------CHHHHHH----HHHHHHHST-TCSE---EEEESSH
T ss_pred EEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCCC-------CHHHHHH----HHHHHHhCC-CCCE---EEEeCCh
Confidence 345655432 2 25899999998877543221222 2222333 367778876 3332 2445678
Q ss_pred HHHHHHHHHhhcC--CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCC-------------CCHHH
Q 009673 178 SPANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL-------------VDYDM 242 (529)
Q Consensus 178 s~A~~~~l~all~--pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~-------------iD~d~ 242 (529)
++|+..++..+.. ++++|++.++.+.|.... .....|.......++. ..+. -|+++
T Consensus 119 sea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~ 189 (429)
T 3k28_A 119 TEATMSALRLARGYTGRNKILKFIGCYHGHGDS-------LLIKAGSGVATLGLPD--SPGVPEGVAKNTITVAYNDLES 189 (429)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGG-------GCSSCCTTC-----CC--CTTCCHHHHTTEEEEETTCHHH
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHH-------HHHhcCCcccccCCCC--cCCCCCcccCceeecCCCCHHH
Confidence 8999999877653 678999988766433211 1111121111111110 0111 18999
Q ss_pred HHHHhhhc--CCcEEEEcCCCCCC--CCC----HHHHHHHHHHhCCEEEEecccccccccccccC-C-CCC-cccEEEec
Q 009673 243 LEKTAILF--RPKLIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-D-PFK-YCDVVTTT 311 (529)
Q Consensus 243 le~~i~~~--~pklIi~~~s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~-~-~~~-~aDiv~~S 311 (529)
|+++++.+ ++++|+++..++.+ ..+ +++|+++|++||++||+|++| .|+ ..+... . .+. ..|+++
T Consensus 190 le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~-~g~-~~g~~~~~~~~~~~~di~t-- 265 (429)
T 3k28_A 190 VKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVM-TGF-RVAYNCGQGYYGVTPDLTC-- 265 (429)
T ss_dssp HHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTT-TTT-TSSTTHHHHHHTCCCSEEE--
T ss_pred HHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-ccc-ccCcchHHHHhCCCCceeh--
Confidence 99998742 46677776544332 455 999999999999999999997 454 322110 0 001 246664
Q ss_pred ccccc-cCCCCeEEEeeCCCcchhHHHhhhcccc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Q 009673 312 THKSL-RGPRGGMIFFKKDPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALAS 388 (529)
Q Consensus 312 ~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~ 388 (529)
++|++ .|+|.|++++++ ++.+.+.... +.+...+.+....++..++++... ++..+++.++++++.+
T Consensus 266 ~sK~~~~G~~iG~~~~~~------~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~ 335 (429)
T 3k28_A 266 LGKVIGGGLPVGAYGGKA------EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT----PESYVEFERKAEMLEA 335 (429)
T ss_dssp ECGGGGTTSCCEEEEECH------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHH
T ss_pred hhhhhcCCCCeEEEEEcH------HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 56998 457889999987 7777665321 111111223334444444666432 5677888888888888
Q ss_pred HHHhc----Cc-EEecCCCCCceEEEccCCCCC------------cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEE
Q 009673 389 RLVEL----GY-KLVSGGSDNHLVLVDLRPMGI------------DGARVEKILDMASITLNKNSVPGDKSALVPGGIRI 451 (529)
Q Consensus 389 ~L~~~----G~-~v~~~gt~~~~~~v~~~~~~i------------~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRi 451 (529)
.|++. ++ ..+.+ ...++++.+..... ....+.+.|.+.||.+.. + ..+.+|+
T Consensus 336 ~L~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~-----~~~~~r~ 404 (429)
T 3k28_A 336 GLRKAAEKHGIPHHINR--AGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPP----S-----QFEGLFL 404 (429)
T ss_dssp HHHHHHHHTTCCCEEEE--ETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCS----S-----TTSCBCC
T ss_pred HHHHHHhhCCCCEEEEe--eccEEEEEEecCCcccccccccccHHHHHHHHHHHHHCCeEEec----C-----CCCCEEE
Confidence 88762 22 11111 12344454432111 125566777789999843 2 2356787
Q ss_pred ccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 452 GSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 452 g~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
++ ..+++|++++++.|++++.
T Consensus 405 ~~------~~t~e~i~~~l~~l~~~l~ 425 (429)
T 3k28_A 405 ST------VHSDADIEATIAAAEIAMS 425 (429)
T ss_dssp CT------TCCHHHHHHHHHHHHHHHH
T ss_pred EC------CCCHHHHHHHHHHHHHHHH
Confidence 53 2568999999999998875
No 222
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.75 E-value=1.3e-16 Score=167.84 Aligned_cols=324 Identities=14% Similarity=0.104 Sum_probs=188.8
Q ss_pred ceeEecCC--C---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673 104 SLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (529)
Q Consensus 104 ~i~L~ase--n---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs 178 (529)
.|++..+. + +.++.|.+++...+.+....++ ..+...+ .+++++++++ ..+. .+..+||+
T Consensus 58 ~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~-------~~~~~~~----l~~~la~~~~-~~~~---v~~~~sgs 122 (434)
T 2epj_A 58 IVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYGA-------PGEAEVL----LAEKILGYVK-RGGM---IRFVNSGT 122 (434)
T ss_dssp EEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSS-------CCHHHHH----HHHHHHHHHC-TTCE---EEEESSHH
T ss_pred EEEcccchhcccCCCCCHHHHHHHHHHHHhCCCCCC-------CCHHHHH----HHHHHHHhCC-CCCE---EEEeCCHH
Confidence 46665543 2 2589999999888754321111 1222333 3477788884 2321 24457788
Q ss_pred HHHHHHHHhh--cCCCCEEEEcCCCCCccccccccccccc------cccccce----EEEEEcccCCCCCCCCHHHHHHH
Q 009673 179 PANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRR------VSGTSIY----FESMPYRLDESTGLVDYDMLEKT 246 (529)
Q Consensus 179 ~A~~~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~------i~~~g~~----~~~v~~~v~~~~~~iD~d~le~~ 246 (529)
+|+..++.+. +.++|+|+++++.|.+............ ....|.. .+++.++. .|+++|+++
T Consensus 123 eA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~------~d~~~le~~ 196 (434)
T 2epj_A 123 EATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY------NDVEALERV 196 (434)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET------TCHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC------CCHHHHHHH
Confidence 9999988861 3356788888877644321100000000 0001110 01222221 389999999
Q ss_pred hhh--cCCcEEEEcCCCCC-C-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEeccccc
Q 009673 247 AIL--FRPKLIIAGASAYP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKS 315 (529)
Q Consensus 247 i~~--~~pklIi~~~s~~p-~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~ 315 (529)
+++ .++++|+++..+++ + ..+ +++|+++|++||++||+|++|. |+ ..+.. . ..+. ..|++ |++|+
T Consensus 197 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~~~~di~--s~sK~ 272 (434)
T 2epj_A 197 FAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GF-RLGLEGAQGYFNIEGDII--VLGKI 272 (434)
T ss_dssp HHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TT-TSSTTHHHHHHTCCCSEE--EEEGG
T ss_pred HHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-ce-eCCcchhhHHhCCCCCee--eecch
Confidence 875 26778888754332 3 566 9999999999999999999976 55 22210 0 0001 35775 56799
Q ss_pred cc-CCCCeEEEeeCCCcchhHHHhhhcccc--cC-CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Q 009673 316 LR-GPRGGMIFFKKDPVLGVELESAINNAV--FP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLV 391 (529)
Q Consensus 316 l~-GprgG~i~~~~~~~~~~~l~~~i~~~~--~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~ 391 (529)
++ |.++|++++++ ++.+.+.... +. +..++ +...+++..++|+.+.. +++.+++.++++++.+.|+
T Consensus 273 l~~G~~~G~v~~~~------~~~~~l~~~~~~~~~~t~~~-~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~L~ 342 (434)
T 2epj_A 273 IGGGFPVGAVAGSR------EVMSLLTPQGKVFNAGTFNA-HPITMAAGLATLKALEE---EPVYSVSREAAKALEEAAS 342 (434)
T ss_dssp GGTTSSCEEEEECH------HHHTTBTTTSSBCCCCTTTT-CHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHH
T ss_pred hcCCcceeeeeecH------HHHHhhccCCCcccCCCCCc-CHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHH
Confidence 84 46889999987 6777665411 11 11222 33344444456765532 2356777778888888886
Q ss_pred hc----CcEE-ecCCCCCceEEEccCCCC------------CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccC
Q 009673 392 EL----GYKL-VSGGSDNHLVLVDLRPMG------------IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSP 454 (529)
Q Consensus 392 ~~----G~~v-~~~gt~~~~~~v~~~~~~------------i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~ 454 (529)
+. ++.. +.+ ...++++++.... .+...+.+.|.++||.+.. +. ...+|++.
T Consensus 343 ~~~~~~~~~~~~~~--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~~-----~~~~~~~~- 410 (434)
T 2epj_A 343 EVLDRTGLPYTINR--VESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAP----SN-----LEAVFTGL- 410 (434)
T ss_dssp HHHHHHTCCEEEEE--ETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCS----ST-----TSCEECCT-
T ss_pred HHHhhCCCcEEEEE--eeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEec----cC-----CCcEEEec-
Confidence 63 5532 222 2345666664311 1235677778789999843 21 13466542
Q ss_pred CCccCCCCHHHHHHHHHHHHHHHHH
Q 009673 455 AMTTRGFSEKEFVAIADFIHEGVEI 479 (529)
Q Consensus 455 ~~tt~g~~~~d~~~la~~i~~~~~~ 479 (529)
.++++|++++++.|++++..
T Consensus 411 -----~~t~e~i~~~l~~l~~~l~~ 430 (434)
T 2epj_A 411 -----PHQGEALEIAVEGLRSSLKT 430 (434)
T ss_dssp -----TCSHHHHHHHHHHHHHHHHH
T ss_pred -----cCCHHHHHHHHHHHHHHHHH
Confidence 25689999999999988764
No 223
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.74 E-value=4.5e-16 Score=165.05 Aligned_cols=328 Identities=13% Similarity=0.036 Sum_probs=183.4
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc--CC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--~p 191 (529)
.+|.|.+|+...+... .. +....+ ..+ .....+++++++++.+..+ -.+..+||++|+..++..+. ..
T Consensus 81 ~~p~v~~A~~~~~~~~-~~-~~~~~~--~~~----~~~~la~~l~~~~~~~~~~--~v~~~~sGseA~~~alk~a~~~~g 150 (453)
T 4ffc_A 81 SHPAVAAAIADQATHF-TH-TCFMVT--PYE----QYVQVAELLNALTPGDHDK--RTALFNSGAEAVENAIKVARLATG 150 (453)
T ss_dssp TCHHHHHHHHHHHHHC-SC-CTTTTS--CCH----HHHHHHHHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhc-cc-cccCcC--CCH----HHHHHHHHHHHhCCCCCCc--EEEEeCcHHHHHHHHHHHHHHhcC
Confidence 4899999998877532 11 111111 122 2223347888888754211 12445778899999986654 24
Q ss_pred CCEEEEcCCCCCcccccccc------ccccccccccceEEEEEcccCC-CCCCCC--------HHHHHHHhhhcCCcEEE
Q 009673 192 HDRIMGLDLPHGGHLSHGFM------TPKRRVSGTSIYFESMPYRLDE-STGLVD--------YDMLEKTAILFRPKLII 256 (529)
Q Consensus 192 GD~Vl~~~~~~~g~~s~g~~------~~~~~i~~~g~~~~~v~~~v~~-~~~~iD--------~d~le~~i~~~~pklIi 256 (529)
+++|++.++.|.|+...... .++.........+..++++... +.+..+ .+.|++.+...++.+|+
T Consensus 151 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi 230 (453)
T 4ffc_A 151 RPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAII 230 (453)
T ss_dssp CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEE
T ss_pred CCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 58999998876443210000 0000000111123344443211 111222 45566666543445566
Q ss_pred EcCCCCCC---CCC----HHHHHHHHHHhCCEEEEecccccccccccccCCCCC----cccEEEecccccc-cCCCCeEE
Q 009673 257 AGASAYPR---DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSL-RGPRGGMI 324 (529)
Q Consensus 257 ~~~s~~p~---~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~----~aDiv~~S~hK~l-~GprgG~i 324 (529)
+. |+++. ..+ +++|+++|++||++||+|++|. |+...+.. ..++ ..|+++ ++|++ .|+|.|++
T Consensus 231 ~e-p~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~g~~g~~-~a~~~~~~~pdi~t--~sK~~~~G~~~G~~ 305 (453)
T 4ffc_A 231 IE-PIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQT-GFARTGAW-FASEHEGIVPDIVT--MAKGIAGGMPLSAV 305 (453)
T ss_dssp EC-SSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSS-STHHHHTCCCSEEE--ECGGGGTTSSCEEE
T ss_pred Ec-CCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCcc-CCCccccc-chhhhcCCCcchHh--hhhhhcCCcCeEEE
Confidence 65 43332 333 8999999999999999999964 43222211 0111 246665 55998 56788999
Q ss_pred EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----c-CcEEec
Q 009673 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----L-GYKLVS 399 (529)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~-G~~v~~ 399 (529)
++++ ++.+.+......+..+++...+.+++ ++|+.+..+ ++.+++.++.+++.+.|.+ . ++..+.
T Consensus 306 ~~~~------~i~~~~~~~~~~~t~~~~~~~~aaa~-aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 375 (453)
T 4ffc_A 306 TGRA------ELMDAVYAGGLGGTYGGNPVTCAAAV-AALGVMREL---DLPARARAIEASVTSRLSALAEEVDIIGEVR 375 (453)
T ss_dssp EEEH------HHHTTSCTTSSCCSSSSCHHHHHHHH-HHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCSSEEEEE
T ss_pred EECH------HHHhhhcccCcCCCCCcCHHHHHHHH-HHHHHhhhh---hHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence 9988 77777765443334444444444443 356654322 3455566666666666654 2 233222
Q ss_pred CCCCCceEEEccCC------CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHH
Q 009673 400 GGSDNHLVLVDLRP------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 473 (529)
Q Consensus 400 ~gt~~~~~~v~~~~------~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i 473 (529)
+ ...++++++.. .......+.+.|.+.||.+.. +.. ..+.+||..+.. .+++|++++++.|
T Consensus 376 ~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~~~---~~~~iRi~~~~~----~t~e~i~~~l~~l 442 (453)
T 4ffc_A 376 G--RGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILT----CGT---FGNVIRLLPPLV----IGDDLLDEGITAL 442 (453)
T ss_dssp E--ETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCE----ECT---TSCEEEECCCTT----CCHHHHHHHHHHH
T ss_pred e--eceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEec----CCC---CCCEEEEECCCC----CCHHHHHHHHHHH
Confidence 2 12455555532 111245577778889999843 211 236899986644 4589999999999
Q ss_pred HHHHHH
Q 009673 474 HEGVEI 479 (529)
Q Consensus 474 ~~~~~~ 479 (529)
++++..
T Consensus 443 ~~~l~~ 448 (453)
T 4ffc_A 443 SDIIRA 448 (453)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998864
No 224
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.74 E-value=6.6e-16 Score=163.69 Aligned_cols=329 Identities=12% Similarity=0.029 Sum_probs=182.2
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC--C
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--P 191 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--p 191 (529)
.+|.|.+|+...+... .. +.... ...+ ......++++++++.+..+ -.+..+||++|+..++..+.. .
T Consensus 78 ~~p~v~~A~~~~~~~~-~~-~~~~~--~~~~----~~~~la~~l~~~~~~~~~~--~v~~~~sGseA~~~Alk~a~~~~g 147 (451)
T 3oks_A 78 SAPKVVEAVRSQVGDF-TH-TCFMV--TPYE----GYVAVCEQLNRLTPVRGDK--RSALFNSGSEAVENAVKIARSHTH 147 (451)
T ss_dssp TCHHHHHHHHHHHTTC-SC-CTTTT--SCCH----HHHHHHHHHHHHSSCCSSE--EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhc-cc-ccCCc--cCCH----HHHHHHHHHHHhCCcCCCC--EEEEeCcHHHHHHHHHHHHHHhcC
Confidence 4899999998877432 11 11111 1122 2223347888888754211 124457788999999876643 4
Q ss_pred CCEEEEcCCCCCccccccc------cccccccccccceEEEEEccc---------CCCC-CCCCHHHHHHHhh----hcC
Q 009673 192 HDRIMGLDLPHGGHLSHGF------MTPKRRVSGTSIYFESMPYRL---------DEST-GLVDYDMLEKTAI----LFR 251 (529)
Q Consensus 192 GD~Vl~~~~~~~g~~s~g~------~~~~~~i~~~g~~~~~v~~~v---------~~~~-~~iD~d~le~~i~----~~~ 251 (529)
+++|++.++.|.|...... ..++.........+..++++. +.+. ...+++.+++.++ ..+
T Consensus 148 ~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~ 227 (451)
T 3oks_A 148 KPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADN 227 (451)
T ss_dssp CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGG
T ss_pred CCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCC
Confidence 5899998887644321000 000000101111233444331 1000 0123454545444 224
Q ss_pred CcEEEEcCCCC-CC-CCC----HHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEecccccc-cCCCC
Q 009673 252 PKLIIAGASAY-PR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRG 321 (529)
Q Consensus 252 pklIi~~~s~~-p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l-~Gprg 321 (529)
+.+|++...+. ++ ..+ +++|+++|++||++||+|++|. |+...+... ..+. ..|++ |++|++ .|+|.
T Consensus 228 ~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~i 304 (451)
T 3oks_A 228 LAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQT-GFARTGAMFACEHEGIDPDLI--VTAKGIAGGLPL 304 (451)
T ss_dssp EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEE--EECGGGGTTSSC
T ss_pred EEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCCccccchhhhhcCCCCCee--eehhhhhCCcce
Confidence 56666653322 22 333 9999999999999999999964 443222110 0011 35777 556998 56788
Q ss_pred eEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----c-CcE
Q 009673 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----L-GYK 396 (529)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~-G~~ 396 (529)
|++++++ ++.+.+......+..+++...+.+++ ++++.+... ++.+++.++.+++.+.|.+ . .+.
T Consensus 305 G~v~~~~------~~~~~~~~~~~~~t~~~~~~~~aaa~-aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 374 (451)
T 3oks_A 305 SAVTGRA------EIMDSPHVSGLGGTYGGNPIACAAAL-ATIETIESE---GLVARAQQIEKIMKDRLGRLQAEDDRIG 374 (451)
T ss_dssp EEEEEEH------HHHTCSCTTSBCCSSSSCHHHHHHHH-HHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred EEEEECH------HHHhhhcCCCcCCCCCCCHHHHHHHH-HHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 9999987 77777765433334444444444443 466654322 3455666666667766654 2 232
Q ss_pred EecCCCCCceEEEccCC------CCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHH
Q 009673 397 LVSGGSDNHLVLVDLRP------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 470 (529)
Q Consensus 397 v~~~gt~~~~~~v~~~~------~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la 470 (529)
.+.+ ...++++++.. ...+...+.+.|.+.||.+... .. ....+||..+.. .+++++++++
T Consensus 375 ~~~~--~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----~~---~~~~iRi~~~~~----~t~e~i~~~l 441 (451)
T 3oks_A 375 DVRG--RGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSC----GT---YGNVVRFLPPLS----IGDDLLNEGL 441 (451)
T ss_dssp EEEE--ETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEE----CT---TSCEEEECCCTT----CCHHHHHHHH
T ss_pred EEEE--eeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecC----CC---CCCEEEEECCCC----CCHHHHHHHH
Confidence 2222 12355555521 1112455777788899998532 11 236899986643 4589999999
Q ss_pred HHHHHHHH
Q 009673 471 DFIHEGVE 478 (529)
Q Consensus 471 ~~i~~~~~ 478 (529)
+.|++++.
T Consensus 442 ~~l~~~l~ 449 (451)
T 3oks_A 442 DVLEEVLR 449 (451)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998875
No 225
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.74 E-value=1.9e-16 Score=168.87 Aligned_cols=320 Identities=13% Similarity=0.019 Sum_probs=187.9
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcC---
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~--- 190 (529)
.+|.|.+|+...+.. +...+...+| ..+...+ ..++++++++.+.+. .+..+||++|+..++..+..
T Consensus 72 ~~p~v~~A~~~~~~~-~~~~~~~~~~--~~~~~~~----lae~l~~~~~~~~~~---v~~~~sGseA~~~aik~a~~~~~ 141 (472)
T 3hmu_A 72 GRDELAEVAARQMRE-LPYYNTFFKT--THVPAIA----LAQKLAELAPGDLNH---VFFAGGGSEANDTNIRMVRTYWQ 141 (472)
T ss_dssp CCHHHHHHHHHHHHH-CSCCCSSSSE--ECHHHHH----HHHHHHHHSCTTEEE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cccccccccc--CCHHHHH----HHHHHHHhCCCCCCE---EEEeCCHHHHHHHHHHHHHHHHH
Confidence 479999999887753 2211221111 1222222 347788888765432 24456788999999988764
Q ss_pred -----CCCEEEEcCCCCCcccccccccccccccccc-----------ceEEEEEccc--CCCCCCCC--------HHHHH
Q 009673 191 -----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-----------IYFESMPYRL--DESTGLVD--------YDMLE 244 (529)
Q Consensus 191 -----pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g-----------~~~~~v~~~v--~~~~~~iD--------~d~le 244 (529)
++++|++.++.|.|... + .....+ ..+..++++. +..++ .| +++|+
T Consensus 142 ~~g~~~~~~ii~~~~~yHg~t~-~------~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le 213 (472)
T 3hmu_A 142 NKGQPEKTVIISRKNAYHGSTV-A------SSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELE 213 (472)
T ss_dssp HTTCTTCCEEEEETTCCCCSSH-H------HHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHH
T ss_pred hcCCCCCCEEEEEcCcCCCccH-H------hhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHH
Confidence 46899999887643210 0 001111 0123334322 10111 34 78888
Q ss_pred HHhhh---cCCcEEEEcCCCCCC--CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-CC-CCC-cccEEEecc
Q 009673 245 KTAIL---FRPKLIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTTTT 312 (529)
Q Consensus 245 ~~i~~---~~pklIi~~~s~~p~--~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~~-~~~-~aDiv~~S~ 312 (529)
++++. .++++|+++..++++ ..+ +++|+++|++||++||+|++|. |+...|.. .. .+. ..|++++
T Consensus 214 ~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~-gfgr~G~~~a~~~~~v~pdi~t~-- 290 (472)
T 3hmu_A 214 EAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVIC-GFGRTGNWFGTQTMGIRPHIMTI-- 290 (472)
T ss_dssp HHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSCHHHHHTCCCSEEEE--
T ss_pred HHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-CCcccCccchhHHhCCCCceeee--
Confidence 88873 256777776544332 444 8999999999999999999964 43222210 00 001 3578765
Q ss_pred cccccC--CCCeEEEeeCCCcchhHHHhhhccc--ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHH-HHHHHHH
Q 009673 313 HKSLRG--PRGGMIFFKKDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV-SNCRALA 387 (529)
Q Consensus 313 hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~--~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~-~~a~~l~ 387 (529)
+|+|+| ++.|++++++ ++.+.++.. ...+..+++.....++ .++|+.+.. +++.+++. ++.+++.
T Consensus 291 sK~l~gg~~plG~v~~~~------~i~~~~~~~~~~~~~t~~~np~a~aAa-~aaL~~~~~---~~~~~~~~~~~~~~l~ 360 (472)
T 3hmu_A 291 AKGLSSGYAPIGGSIVCD------EVAHVIGKDEFNHGYTYSGHPVAAAVA-LENLRILEE---ENILDHVRNVAAPYLK 360 (472)
T ss_dssp CGGGTTTSSCCEEEEEEH------HHHHHHTTSCBCCCCTTTTCHHHHHHH-HHHHHHHHH---TTHHHHHHHTHHHHHH
T ss_pred chhhhcCCcceEEEEECH------HHHHhcccCCccccCCCCCCHHHHHHH-HHHHHHHHH---hHHHHHHHHHHHHHHH
Confidence 599966 7889999988 777777322 1122233333333333 346765532 24566677 7778888
Q ss_pred HHHHhc----CcEEecCCCCCceEEEccCCCCC-----------cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEc
Q 009673 388 SRLVEL----GYKLVSGGSDNHLVLVDLRPMGI-----------DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIG 452 (529)
Q Consensus 388 ~~L~~~----G~~v~~~gt~~~~~~v~~~~~~i-----------~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig 452 (529)
+.|++. ++..+.+ ...++.+++..... ....+.+.|.+.||.+.. + + +.|||+
T Consensus 361 ~~L~~l~~~~~v~~vr~--~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~-----g-~~iRi~ 428 (472)
T 3hmu_A 361 EKWEALTDHPLVGEAKI--VGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRH----V-----G-DRMIIS 428 (472)
T ss_dssp HHHHGGGGSTTEEEEEE--ETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEE----E-----T-TEEEEC
T ss_pred HHHHHHhcCCCeEEEEe--cCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEe----c-----C-CEEEEE
Confidence 888653 1222221 12344555432100 034567778788998843 1 1 789998
Q ss_pred cCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 453 SPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 453 ~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
.+.. .+++|++++++.|++++...
T Consensus 429 p~~~----~t~e~i~~~l~~l~~~l~~~ 452 (472)
T 3hmu_A 429 PPLV----ITPAEIDEMFVRIRKSLDEA 452 (472)
T ss_dssp CCTT----CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCC----CCHHHHHHHHHHHHHHHHHH
Confidence 6644 45899999999999998654
No 226
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.74 E-value=1.8e-16 Score=167.94 Aligned_cols=313 Identities=12% Similarity=0.077 Sum_probs=185.4
Q ss_pred CcHHHH-H-HHhh---hhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC-CCCCCCceeeecCChHHHHHHHHHh
Q 009673 114 TSRAVM-E-AVGS---CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGSPANFEVYTA 187 (529)
Q Consensus 114 ~~~~V~-e-al~~---~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g-~~~~~~~~~V~~~sGs~A~~~~l~a 187 (529)
.+|.|+ + |+.. .+... .. + +.+| ..+...++ .++++++++ .+.++ .+..++|++|+..++..
T Consensus 71 ~~p~v~~~~A~~~~~~~~~~~-~~-~-~~~~--~~~~~~~l----a~~la~~~~~~~~~~---v~~~~~gseA~~~aik~ 138 (449)
T 2cjg_A 71 NPPALVDDREFHAELMQAALN-KP-S-NSDV--YSVAMARF----VETFARVLGDPALPH---LFFVEGGALAVENALKA 138 (449)
T ss_dssp SCHHHHTCHHHHHHHHHHHTC-CC-C-TTTC--CCHHHHHH----HHHHHHHHCCTTCCE---EEEESSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhc-CC-C-Cccc--CCHHHHHH----HHHHHHhcCCCCCCE---EEEeCchHHHHHHHHHH
Confidence 478999 8 8887 54322 11 1 1122 12222333 367888886 33332 24456678999998875
Q ss_pred hc---C----------C-CCEEEEcCCCCCccccccccccccccccccc------e-----EEEEEcccCCC-CC-----
Q 009673 188 IL---K----------P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------Y-----FESMPYRLDES-TG----- 236 (529)
Q Consensus 188 ll---~----------p-GD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~------~-----~~~v~~~v~~~-~~----- 236 (529)
+. + | ||+|+++++.|.|..... +...+. . ..++.++.+.. ..
T Consensus 139 a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 211 (449)
T 2cjg_A 139 AFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYT-------LSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMA 211 (449)
T ss_dssp HHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTG-------GGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHH
T ss_pred HHHHhcccccccccccCCCCEEEEECCCcCCcccch-------hhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccc
Confidence 42 2 2 899999998765432211 111110 0 13334443310 01
Q ss_pred ---CCCHHHHHHHhhh--cCCcEEEEcCCCCC-C-CCC----HHHHHHHHHHhCCEEEEecccccccccccccCCCC---
Q 009673 237 ---LVDYDMLEKTAIL--FRPKLIIAGASAYP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF--- 302 (529)
Q Consensus 237 ---~iD~d~le~~i~~--~~pklIi~~~s~~p-~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~--- 302 (529)
..|+++|++.++. .++++|+++..+++ + ..+ +++|+++|++||++||+|++|. |+...+.. ..+
T Consensus 212 ~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~-~~~~~~ 289 (449)
T 2cjg_A 212 ALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQT-GCGLTGTA-WAYQQL 289 (449)
T ss_dssp HHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSS-STHHHH
T ss_pred hhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEecccc-CCCccCcc-eeeccc
Confidence 2566779988863 26788888765444 3 355 9999999999999999999976 44322211 011
Q ss_pred C-cccEEEecccccccCCCCeEEEeeCCCcchhHHHhhhcc-----cccCCCCCCChHHHHHHHHHHHHHhcCchHHHHH
Q 009673 303 K-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINN-----AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (529)
Q Consensus 303 ~-~aDiv~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~-----~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~ 376 (529)
. ..|+++ ++|+| +.|++++++ ++.+.+.. ....+..++ +....+|..++|+.+.. +++.
T Consensus 290 ~~~~di~t--~sK~l---~iG~~~~~~------~~~~~l~~~~~~~~~~~~t~~~-n~~~~~aa~aal~~~~~---~~~~ 354 (449)
T 2cjg_A 290 DVAPDIVA--FGKKT---QVCGVMAGR------RVDEVADNVFAVPSRLNSTWGG-NLTDMVRARRILEVIEA---EGLF 354 (449)
T ss_dssp TCCCSEEE--ECGGG---SSEEEEECG------GGGGSTTCTTTSTTSSCCSSSS-CHHHHHHHHHHHHHHHH---HTHH
T ss_pred CCCceEEE--ecCcc---cEEEEEECH------HHhhhhhhcccCCcccccCCCC-CHHHHHHHHHHHHHHHh---ccHH
Confidence 1 357765 56998 688888887 56654221 111122233 33344444456765532 2456
Q ss_pred HHHHHHHHHHHHHHHhc-----C-cEEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEE
Q 009673 377 NKVVSNCRALASRLVEL-----G-YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIR 450 (529)
Q Consensus 377 ~~i~~~a~~l~~~L~~~-----G-~~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iR 450 (529)
+++.++++++.+.|++. + +..+.+ ...++++++... .+..++.+.|.++||.+.. + ..+.||
T Consensus 355 ~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~--~g~~~~~~~~~~-~~~~~~~~~l~~~Gv~v~~----~-----g~~~iR 422 (449)
T 2cjg_A 355 ERAVQHGKYLRARLDELAADFPAVVLDPRG--RGLMCAFSLPTT-ADRDELIRQLWQRAVIVLP----A-----GADTVR 422 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTTSEEEEE--ETTEEEEECSSH-HHHHHHHHHHHHTTEECEE----E-----TTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeEee--ccEEEEEEECCh-HHHHHHHHHHHHCCeEEec----C-----CCCEEE
Confidence 77788888888888763 2 333322 234556676431 1245677777789999853 2 247899
Q ss_pred EccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 451 IGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 451 ig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
|+.+.. .+++|++++++.|++++.
T Consensus 423 i~~~~~----~t~e~i~~~l~~l~~~l~ 446 (449)
T 2cjg_A 423 FRPPLT----VSTAEIDAAIAAVRSALP 446 (449)
T ss_dssp ECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred EECCCC----CCHHHHHHHHHHHHHHHH
Confidence 986543 458999999999998875
No 227
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.73 E-value=3.7e-16 Score=163.93 Aligned_cols=320 Identities=15% Similarity=0.062 Sum_probs=185.8
Q ss_pred ceeEecCC--C---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 009673 104 SLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (529)
Q Consensus 104 ~i~L~ase--n---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs 178 (529)
.|++..+. + +.+|.|.+|+...+......+++ .+...+ ..++++++++ ..+. .+..++|+
T Consensus 54 ~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-------~~~~~~----l~~~l~~~~~-~~~~---v~~~~~g~ 118 (424)
T 2e7u_A 54 YLDYVMSWGPLILGHAHPKVLARVRETLERGLTFGAP-------SPLEVA----LAKKVKRAYP-FVDL---VRFVNSGT 118 (424)
T ss_dssp EEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSC-------CHHHHH----HHHHHHHHCT-TCCE---EEEESSHH
T ss_pred EEEccccccccccCCCCHHHHHHHHHHHHhCCCCCCC-------CHHHHH----HHHHHHHhCC-CCCE---EEEeCCHH
Confidence 46666543 2 35899999998887542111111 122233 3477888885 3332 24456778
Q ss_pred HHHHHHHHh---hcCCCCEEEEcCCCCCccccccccccccc------cccccce----EEEEEcccCCCCCCCCHHHHHH
Q 009673 179 PANFEVYTA---ILKPHDRIMGLDLPHGGHLSHGFMTPKRR------VSGTSIY----FESMPYRLDESTGLVDYDMLEK 245 (529)
Q Consensus 179 ~A~~~~l~a---ll~pGD~Vl~~~~~~~g~~s~g~~~~~~~------i~~~g~~----~~~v~~~v~~~~~~iD~d~le~ 245 (529)
+|+..++.. +. ++|.|++.++.|.++........... ....|.. ..++.++ ..|+++|++
T Consensus 119 ea~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~------~~d~~~le~ 191 (424)
T 2e7u_A 119 EATMSALRLARGYT-GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLE------YNDPEGLRE 191 (424)
T ss_dssp HHHHHHHHHHHHHH-CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEEC------TTCHHHHHH
T ss_pred HHHHHHHHHHHHhh-CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCC------CCCHHHHHH
Confidence 999988875 44 45888888887644321100000000 0001110 0122222 148999999
Q ss_pred Hhhh--cCCcEEEEcCCCC-CC-CCC----HHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccc
Q 009673 246 TAIL--FRPKLIIAGASAY-PR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHK 314 (529)
Q Consensus 246 ~i~~--~~pklIi~~~s~~-p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK 314 (529)
.+++ .++++|+++..+. .+ ..+ +++|+++ ++||++||+|++|. |+ ..+.. . ..+. ..|++ |++|
T Consensus 192 ~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~~~~di~--s~sK 266 (424)
T 2e7u_A 192 VLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GF-RLAFGGATELLGLKPDLV--TLGK 266 (424)
T ss_dssp HHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TT-TSSTTHHHHHHTCCCSEE--EECG
T ss_pred HHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-cc-ccchhHHHHHhCCCcchh--hhhh
Confidence 9874 2567777764332 23 566 9999999 99999999999976 65 22210 0 0001 35766 6779
Q ss_pred ccc-CCCCeEEEeeCCCcchhHHHhhhcccc--cC-CCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 009673 315 SLR-GPRGGMIFFKKDPVLGVELESAINNAV--FP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (529)
Q Consensus 315 ~l~-GprgG~i~~~~~~~~~~~l~~~i~~~~--~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L 390 (529)
+++ |.++|++++++ ++.+.+.... +. +..++ +....++..++++.+.. .+++.+++.++++++.+.|
T Consensus 267 ~l~~G~~~G~~~~~~------~~~~~~~~~~~~~~~~t~~~-~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~~L 337 (424)
T 2e7u_A 267 ILGGGLPAAAYAGRR------EIMEKVAPLGPVYQAGTLSG-NPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEAGL 337 (424)
T ss_dssp GGGTTSSCEEEEECH------HHHTTBTTTSSBCCCCTTCS-CHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHH
T ss_pred hhhCCcceEEEEEcH------HHHhhhcccCCcccCCCCCC-CHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH
Confidence 984 56889999987 7777665411 11 11222 33344444446665432 1356777888888888888
Q ss_pred Hhc----CcEE-ecCCCCCceEEEccCCCC------------CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc
Q 009673 391 VEL----GYKL-VSGGSDNHLVLVDLRPMG------------IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS 453 (529)
Q Consensus 391 ~~~----G~~v-~~~gt~~~~~~v~~~~~~------------i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~ 453 (529)
++. ++.. +.+ ...++++++.... .+...+.+.|.++||.+.. +. ...+|+++
T Consensus 338 ~~~~~~~~~~~~~~~--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~~-----~~~~~~~~ 406 (424)
T 2e7u_A 338 KEVLKEKGLPHTVNR--VGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPP----SN-----FEAAFLSV 406 (424)
T ss_dssp HHHHHHTTCCCEEEE--ETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCS----SS-----SSCEECCT
T ss_pred HHHHHhCCCceEEEe--eceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEec----cC-----CCceEeec
Confidence 763 5431 222 2346677775311 1234577777789999853 21 23466542
Q ss_pred CCCccCCCCHHHHHHHHHHHHHH
Q 009673 454 PAMTTRGFSEKEFVAIADFIHEG 476 (529)
Q Consensus 454 ~~~tt~g~~~~d~~~la~~i~~~ 476 (529)
..+++|++++++.|+++
T Consensus 407 ------~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 407 ------AHREEDVEKTLEALRKA 423 (424)
T ss_dssp ------TCCHHHHHHHHHHHHHH
T ss_pred ------cCCHHHHHHHHHHHHHh
Confidence 25689999999999875
No 228
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.73 E-value=3.2e-15 Score=157.04 Aligned_cols=319 Identities=14% Similarity=0.092 Sum_probs=182.1
Q ss_pred cceeEecCC--C---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673 103 KSLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~ase--n---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG 177 (529)
..|++.++- + ..+|+|.+|+...+.+....+|+ .+...+ ..++++++++ ..+. .+..+||
T Consensus 54 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~-------~~~~~~----la~~l~~~~~-~~~~---v~~~~sG 118 (429)
T 4e77_A 54 AYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGAP-------TEMEVK----MAQLVTDLVP-TMDM---VRMVNSG 118 (429)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSC-------CHHHHH----HHHHHHHHST-TCSE---EEEESSH
T ss_pred EEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCCC-------CHHHHH----HHHHHHhhCC-CCCE---EEEeCcH
Confidence 346655433 2 25899999998887543322222 222223 3367888886 3332 3445778
Q ss_pred HHHHHHHHHhhc--CCCCEEEEcCCCCCccccccccccccccccccceE-----------------EEEEcccCCCCCCC
Q 009673 178 SPANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF-----------------ESMPYRLDESTGLV 238 (529)
Q Consensus 178 s~A~~~~l~all--~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~-----------------~~v~~~v~~~~~~i 238 (529)
++|+..++.... ..+++|++.++.+.|.... .+...+... .+..++ ..
T Consensus 119 sea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 185 (429)
T 4e77_A 119 TEATMSAIRLARGYTGRDKIIKFEGCYHGHADC-------LLVKAGSGALTLGQPNSPGVPTDFAKHTLTCT------YN 185 (429)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEETTCCCC-------------------------CCCTTSCGGGGTTEEEEC------TT
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEcCccCCCChh-------hhhhcCCcccccCCCCcCCCCCccCCceeecC------CC
Confidence 899999887542 3567888887765333210 000000000 011111 23
Q ss_pred CHHHHHHHhhhc--CCcEEEEcCCCC-CC-CCC----HHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccE
Q 009673 239 DYDMLEKTAILF--RPKLIIAGASAY-PR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDV 307 (529)
Q Consensus 239 D~d~le~~i~~~--~pklIi~~~s~~-p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDi 307 (529)
|+++|++++++. ++++|+++..++ ++ ..+ +++|+++|++||++||+|++|. |+ ..+... ..+. ..|+
T Consensus 186 d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~-r~g~~~~~~~~~~~pdi 263 (429)
T 4e77_A 186 DLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMT-GF-RVALAGAQDYYHVIPDL 263 (429)
T ss_dssp CHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTT-BT-TTBTTCHHHHTTCCCSE
T ss_pred CHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-Cc-ccCcchHHHhcCCCCCe
Confidence 899999999753 456666654332 22 444 9999999999999999999976 54 222110 0011 3477
Q ss_pred EEecccccc-cCCCCeEEEeeCCCcchhHHHhhhcccc--cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 009673 308 VTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (529)
Q Consensus 308 v~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~ 384 (529)
+ |++|++ +|+++|++++++ ++.+.+.... +.+...+.+...+++..++|+.+..+ ++.+++.++.+
T Consensus 264 ~--t~sK~~~~G~~~G~~~~~~------~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~ 332 (429)
T 4e77_A 264 T--CLGKIIGGGMPVGAFGGRR------EVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQV---GVYETLTELTD 332 (429)
T ss_dssp E--EEEGGGGTTSCCEEEEECH------HHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTST---THHHHHHHHHH
T ss_pred e--eecccccCCCCeEEEEECH------HHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHH
Confidence 5 566998 467889999987 6777665421 11111123444445555577766433 44566666777
Q ss_pred HHHHHHHh----cCcEEecCCCCCceEEEccCCCC-------------CcHHHHHHhHhcCCeEEcCCCCCCCCCCCCCC
Q 009673 385 ALASRLVE----LGYKLVSGGSDNHLVLVDLRPMG-------------IDGARVEKILDMASITLNKNSVPGDKSALVPG 447 (529)
Q Consensus 385 ~l~~~L~~----~G~~v~~~gt~~~~~~v~~~~~~-------------i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~ 447 (529)
++.+.|.+ .++.....+ ...++++.+.... .....+.+.|.+.||.+.. +. ..
T Consensus 333 ~l~~~L~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~----~~-----~~ 402 (429)
T 4e77_A 333 SLATGLRHAAKEENIPLVVNH-VGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAP----SA-----FE 402 (429)
T ss_dssp HHHHHHHHHHHHTTCCCEEEE-ETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCS----ST-----TS
T ss_pred HHHHHHHHHHHhCCCceEEEE-eeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEee----cC-----CC
Confidence 77777755 243322211 2345566654320 0125577777788999843 21 23
Q ss_pred eEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 448 GIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 448 ~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
.+|++. ..+++|++++++.|++++.
T Consensus 403 ~~~~~~------~~t~e~i~~~l~~l~~~l~ 427 (429)
T 4e77_A 403 AGFMSL------AHSNEDIQKTVNAARRCFA 427 (429)
T ss_dssp CEECCT------TCCHHHHHHHHHHHHHHHT
T ss_pred CEEEec------cCCHHHHHHHHHHHHHHHH
Confidence 566642 2568999999999998764
No 229
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.72 E-value=7.3e-16 Score=163.20 Aligned_cols=322 Identities=13% Similarity=0.082 Sum_probs=184.8
Q ss_pred cceeEecCC--C---CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 009673 103 KSLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (529)
Q Consensus 103 ~~i~L~ase--n---~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sG 177 (529)
..|++..+. + +.++.|.+++...+..... + ++ .++++....++++++++ ..+. .+..++|
T Consensus 58 ~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~--~------~~---~~~~~~~la~~l~~~~~-~~~~---v~~~~gg 122 (453)
T 2cy8_A 58 VYLDFFGGHGALVLGHGHPRVNAAIAEALSHGVQ--Y------AA---SHPLEVRWAERIVAAFP-SIRK---LRFTGSG 122 (453)
T ss_dssp EEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTCS--S------CS---SCHHHHHHHHHHHHHCT-TCSE---EEEESCH
T ss_pred EEEECcccHhhcccCCCCHHHHHHHHHHHHhCCC--C------CC---CCHHHHHHHHHHHhhCC-CCCE---EEEeCCH
Confidence 346665543 2 3589999999887754211 1 11 12445555688888886 4432 2445677
Q ss_pred HHHHHHHHHh---hcCCCCEEEEcCCCCCcccccccccccc---ccccccceE----EEEEcccCCCCCCCCHHHHHHHh
Q 009673 178 SPANFEVYTA---ILKPHDRIMGLDLPHGGHLSHGFMTPKR---RVSGTSIYF----ESMPYRLDESTGLVDYDMLEKTA 247 (529)
Q Consensus 178 s~A~~~~l~a---ll~pGD~Vl~~~~~~~g~~s~g~~~~~~---~i~~~g~~~----~~v~~~v~~~~~~iD~d~le~~i 247 (529)
++|+..++.+ +.+ +|+|++.++.|.|........... .....|... .++.++ ..|+++|++++
T Consensus 123 ~eA~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~d~~~le~~l 195 (453)
T 2cy8_A 123 TETTLLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIR------PDDIEGMREVF 195 (453)
T ss_dssp HHHHHHHHHHHHHHHC-CCEEEEECC----------------------------CGGGEEEEC------TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecC------CCCHHHHHHHH
Confidence 7999999887 555 467888887664332100000000 000011100 111221 14899999998
Q ss_pred hhc--CCcEEEEcCCCCC-C-CCC----HHHHHHHHHHhCCEEEEecccccccccccccC--CCCC-cccEEEecccccc
Q 009673 248 ILF--RPKLIIAGASAYP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL 316 (529)
Q Consensus 248 ~~~--~pklIi~~~s~~p-~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~--~~~~-~aDiv~~S~hK~l 316 (529)
++. ++++|+++..+++ + ..+ +++|+++|++||++||+|++|. |+ ..+... ..+. ..|++ |++|+|
T Consensus 196 ~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~~~~di~--s~sK~l 271 (453)
T 2cy8_A 196 ANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GF-RVGNHGMQALLDVQPDLT--CLAKAS 271 (453)
T ss_dssp HHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TT-TTCTTHHHHHHTCCCSEE--EEEGGG
T ss_pred HhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-cc-ccCchhhhHHhCCCCcEE--EEChhh
Confidence 742 5678877654332 2 456 9999999999999999999976 65 222100 0011 35766 567998
Q ss_pred c-CCCCeEEEeeCCCcchhHHHhhhcc---c-ccC-CCCCCChHHHHHHHHHHHHH-hcCchHHHHHHHHHHHHHHHHHH
Q 009673 317 R-GPRGGMIFFKKDPVLGVELESAINN---A-VFP-GLQGGPHNHTIGGLAVCLKH-AQSPEFKVYQNKVVSNCRALASR 389 (529)
Q Consensus 317 ~-GprgG~i~~~~~~~~~~~l~~~i~~---~-~~p-~~~g~p~~~~iaala~al~~-~~~~~~~~~~~~i~~~a~~l~~~ 389 (529)
+ |+++|++++++ ++.+.+.. . .+. +..++ +....++...+++. + . +++.+++.++++++.+.
T Consensus 272 ~~G~~~G~v~~~~------~~~~~l~~~~~~~~~~~~t~~~-n~~~~aa~~aal~~~~-~---~~~~~~~~~~~~~l~~~ 340 (453)
T 2cy8_A 272 AGGLPGGILGGRE------DVMGVLSRGSDRKVLHQGTFTG-NPITAAAAIAAIDTIL-E---DDVCAKINDLGQFAREA 340 (453)
T ss_dssp GTTSSCEEEEECH------HHHTTSSSCC---------CCC-CHHHHHHHHHHHHHHH-H---TTHHHHHHHHHHHHHHH
T ss_pred hCCcceEEEechH------HHHHHhccccCCCceeCCCCCC-CHHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHHH
Confidence 5 57899999987 67776654 1 011 11222 33344444456765 4 2 23456777778888888
Q ss_pred HHhc----CcEE-ecCCCCCceEEEccCC-----C-------------CCcHHHHHHhHhcCCeEEcCCCCCCCCCCCCC
Q 009673 390 LVEL----GYKL-VSGGSDNHLVLVDLRP-----M-------------GIDGARVEKILDMASITLNKNSVPGDKSALVP 446 (529)
Q Consensus 390 L~~~----G~~v-~~~gt~~~~~~v~~~~-----~-------------~i~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~ 446 (529)
|++. ++.. +.+ ...++++++.. . ..+..++.+.|.++||.+. |+
T Consensus 341 L~~~~~~~~~~~~~~~--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~----~~------- 407 (453)
T 2cy8_A 341 MNHLFARKGLNWLAYG--RFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIG----GR------- 407 (453)
T ss_dssp HHHHHHHTTCCEEEEC--CTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECB----TT-------
T ss_pred HHHHHhhCCCcEEEEE--eeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEe----CC-------
Confidence 8653 4422 222 23466776653 1 0123557777778899982 32
Q ss_pred CeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 447 GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 447 ~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
+.+|+++ .++++|++++++.|++++...
T Consensus 408 ~~~~l~~------~~t~~~i~~~l~~l~~~l~~~ 435 (453)
T 2cy8_A 408 GSVFLSA------QHEREHVEHLVTTFDRVLDRL 435 (453)
T ss_dssp TEEECCT------TCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEeec------cCCHHHHHHHHHHHHHHHHHH
Confidence 2466541 257899999999999988643
No 230
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.71 E-value=3.6e-16 Score=161.70 Aligned_cols=313 Identities=12% Similarity=0.121 Sum_probs=188.6
Q ss_pred CchhHHH-HHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhcCC---C-CEEEEcCCCCCccccccccccccc
Q 009673 142 GNEYIDE-LETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP---H-DRIMGLDLPHGGHLSHGFMTPKRR 216 (529)
Q Consensus 142 g~~~~d~-lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all~p---G-D~Vl~~~~~~~g~~s~g~~~~~~~ 216 (529)
|...+.. -|.++.+|++.+ |++... ..+.+..+|.++++++++.+++ | |+|+++...|-+.+ +.
T Consensus 110 Gssll~~ltn~l~ld~L~~~-G~~~~~--~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~--------kA 178 (501)
T 3hl2_A 110 GSSLLNKITNSLVLDIIKLA-GVHTVA--NCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCF--------KS 178 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCTTCC--EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHH--------HH
T ss_pred chHHHHHHHHHHHHHHHHHc-CCCCCC--cEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHH--------HH
Confidence 4444433 355666777776 998642 1122233345777777776664 4 99999887664432 35
Q ss_pred cccccceEEEEEcc--cCCCCCCCCHHHHHHHhhhcCCc--EEEEc-CCCC-CC-CCCHHHHHHHHHHhCCEEEEecccc
Q 009673 217 VSGTSIYFESMPYR--LDESTGLVDYDMLEKTAILFRPK--LIIAG-ASAY-PR-DFDYPRMRQIADAVGALLMMDMAHI 289 (529)
Q Consensus 217 i~~~g~~~~~v~~~--v~~~~~~iD~d~le~~i~~~~pk--lIi~~-~s~~-p~-~~d~~~i~~ia~~~g~~livD~ah~ 289 (529)
+.+.|. +++.++ ++.+...+|+++|+++|+++.++ ++++. .+.| |+ ..|+++|+++|++||+++++|+||.
T Consensus 179 liL~Gl--~Pv~V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhG 256 (501)
T 3hl2_A 179 MITAGF--EPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYG 256 (501)
T ss_dssp HHHTTC--EEEEECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTC
T ss_pred HHHcCC--eEEEEeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcch
Confidence 566776 444433 33345789999999999886433 33333 4455 44 5799999999999999999999987
Q ss_pred cccccccccC-CCCC-c-ccEEEecccccccCCCCeEE-EeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHH
Q 009673 290 SGLVAASVVA-DPFK-Y-CDVVTTTTHKSLRGPRGGMI-FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (529)
Q Consensus 290 ~Gli~~~~~~-~~~~-~-aDiv~~S~hK~l~GprgG~i-~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~ 365 (529)
..+......+ ..+. + +|+++.|+||++..|-||.+ +.+++ ++.+++.. .+|+.+++ ...+.+..++.
T Consensus 257 ah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~-----e~l~~~~~-~yPGr~S~---Spsldl~~tLL 327 (501)
T 3hl2_A 257 VQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFND-----SFIQEISK-MYPGRASA---SPSLDVLITLL 327 (501)
T ss_dssp TTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCH-----HHHHHHHH-TSCSCBCS---HHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHhcCCCcEEEecccccceeecCceEEEeCCH-----HHHHHHHH-hCCCCCCC---cHHHHHHHHHH
Confidence 6553322111 1122 4 99999999999988877644 45653 66666643 45665432 12233344555
Q ss_pred HhcCchHHHHHHHHHHHHHHHHHHHHh----cCcEEecCCCCCceE-EEccCCCC----CcHHHHHHhHhcCCeEEcCCC
Q 009673 366 HAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSDNHLV-LVDLRPMG----IDGARVEKILDMASITLNKNS 436 (529)
Q Consensus 366 ~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~~v~~~gt~~~~~-~v~~~~~~----i~~~~~~~~L~~~GI~v~~~~ 436 (529)
.+...+|++..++..+++++|.+.|++ .|-+++.. ..|.+. -+.+...+ -+..++-..|-..+|.-....
T Consensus 328 ~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~-~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv 406 (501)
T 3hl2_A 328 SLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHT-PHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVV 406 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCC-TTCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTCCSCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCC-CCCceeEEEecccccccccccHHHHHHHHHhcCCCcceee
Confidence 556678899999999999999999987 35555531 224432 23343221 112334444444443211100
Q ss_pred CCCCC---------------CCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHHH
Q 009673 437 VPGDK---------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITL 481 (529)
Q Consensus 437 ~Pg~~---------------~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~~ 481 (529)
.||+. ..+...++-+. ..-|++++|++.+.+.|++++....
T Consensus 407 ~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a----~aiG~~~~~v~~~~~~l~~~~~~~~ 462 (501)
T 3hl2_A 407 PLGSMQTVSGYTFRGFMSHTNNYPCAYLNAA----SAIGMKMQDVDLFIKRLDRCLKAVR 462 (501)
T ss_dssp CTTCCEEETTEEESSTTTTSSCCSSCEEEEE----CCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCceEECCeeecCcccCCCCCCchHHHHH----HHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 12221 00111223221 2358999999999999999998653
No 231
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.62 E-value=1.2e-14 Score=154.84 Aligned_cols=316 Identities=14% Similarity=0.120 Sum_probs=178.7
Q ss_pred CcHHHHHHHhhhhhcc-CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc---
Q 009673 114 TSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~-y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--- 189 (529)
.+|.|.+|+...+... +..+. . ++. ....++++.+.++++++++...+. .+...||++||..++..+.
T Consensus 80 ~~p~v~~A~~~~~~~~~~~~~~---~-~~~-~~~~~l~~~la~~l~~~~~~~~~~---v~f~~sGseA~~~Aik~a~~~~ 151 (472)
T 1ohv_A 80 SHPALVKLVQQPQNVSTFINRP---A-LGI-LPPENFVEKLRESLLSVAPKGMSQ---LITMACGSCSNENAFKTIFMWY 151 (472)
T ss_dssp TCHHHHHHHHCGGGHHHHHCCC---C-TTT-SCBTTHHHHHHHTGGGGCCTTCCE---EEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhccccccc---c-ccc-ccHHHHHHHHHHHHHHhCCCCcCE---EEEeCCchhHHHHHHHHHHHHh
Confidence 5899999998765321 11111 1 111 111244444445566666444332 2456888999999987663
Q ss_pred ----------------------CCC---CEEEEcCCCCCccccccccccccccccccce-----------EEEEEcccC-
Q 009673 190 ----------------------KPH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----------FESMPYRLD- 232 (529)
Q Consensus 190 ----------------------~pG---D~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~-----------~~~v~~~v~- 232 (529)
+|| |+|++.++.|.|+... .+.+.|.. +..++++..
T Consensus 152 ~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~-------~~~~~g~~~~~~~~~~~~~~~~~~~p~~~ 224 (472)
T 1ohv_A 152 RSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMG-------CLATTHSKAIHKIDIPSFDWPIAPFPRLK 224 (472)
T ss_dssp HHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHH-------HHHHCCSCHHHHTTSCCCCCCEECCCCCC
T ss_pred hhhccCcccccccccccccccccccCCCCeEEEECCCcccccHH-------HHhcCCCccccccCCCCCCCcccCCCccc
Confidence 156 8999999776443211 11111110 011122210
Q ss_pred -C--CC-------CCCCHHHHHHHhhhc-----CCcEEEEcCC-CCCC-CCC----HHHHHHHHHHhCCEEEEecccccc
Q 009673 233 -E--ST-------GLVDYDMLEKTAILF-----RPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISG 291 (529)
Q Consensus 233 -~--~~-------~~iD~d~le~~i~~~-----~pklIi~~~s-~~p~-~~d----~~~i~~ia~~~g~~livD~ah~~G 291 (529)
+ .. ...|+++|+++++++ ++++|++... ++.+ ..+ +++|+++|++||++||+|++|. |
T Consensus 225 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g 303 (472)
T 1ohv_A 225 YPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQT-G 303 (472)
T ss_dssp SSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTT-T
T ss_pred CccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCccc-C
Confidence 0 00 023688999998763 6788888743 3333 556 9999999999999999999975 4
Q ss_pred ccccccc----CCCCC-cccEEEeccccc-ccCCCCeEEEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHH
Q 009673 292 LVAASVV----ADPFK-YCDVVTTTTHKS-LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (529)
Q Consensus 292 li~~~~~----~~~~~-~aDiv~~S~hK~-l~GprgG~i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~ 365 (529)
+...+.. ...+. ..|+++ ++|+ ++ ||+++ ++ ++. .+......+..+++ ...+++..++|+
T Consensus 304 ~g~~g~~~~~~~~gv~~~~Di~t--~sK~~l~---GG~~~-~~------~~~-~~~~~~~~~T~~~~-~~~~aaa~aal~ 369 (472)
T 1ohv_A 304 GGSTGKFWAHEHWGLDDPADVMT--FSKKMMT---GGFFH-KE------EFR-PNAPYRIFNTWLGD-PSKNLLLAEVIN 369 (472)
T ss_dssp TTTTSSSSGGGGGCCSSCCSEEE--ECGGGSS---EEEEE-CG------GGS-CSSSSSSCCSSSSC-HHHHHHHHHHHH
T ss_pred CCCCCCchhccccCCCCCCCEEE--Ecccccc---CCccC-ch------hhc-ccccccccCccCcc-HHHHHHHHHHHH
Confidence 3222210 00010 167765 5599 44 47776 44 442 12222122222333 334444445677
Q ss_pred HhcCchHHHHHHHHHHHHHHHHHHHHhc--Cc----EEecCCCCCceEEEccCCCCCcHHHHHHhHhcCCeEEcCCCCCC
Q 009673 366 HAQSPEFKVYQNKVVSNCRALASRLVEL--GY----KLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPG 439 (529)
Q Consensus 366 ~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~----~v~~~gt~~~~~~v~~~~~~i~~~~~~~~L~~~GI~v~~~~~Pg 439 (529)
.+..+ ++.+++.+++++|.+.|++. ++ ..+.+ ...++.+++.. ..+...+.+.|.+.||.+.. +
T Consensus 370 ~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~--~g~~~~~~~~~-~~~~~~~~~~l~~~Gv~~~~----~ 439 (472)
T 1ohv_A 370 IIKRE---DLLSNAAHAGKVLLTGLLDLQARYPQFISRVRG--RGTFCSFDTPD-ESIRNKLISIARNKGVMLGG----C 439 (472)
T ss_dssp HHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEE--ETTEEEEECSS-HHHHHHHHHHHHHTTEECEE----E
T ss_pred HHHhC---CHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecC--CceEEEEEeCC-hhHHHHHHHHHHHCCeEEec----C
Confidence 55432 34677777888888888763 22 21222 23455556542 11234566777778999843 2
Q ss_pred CCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 440 DKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 440 ~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
..+.|||+.+.. .+++|++++++.|++++.
T Consensus 440 -----g~~~iRi~~~~~----~t~e~i~~~~~~l~~~l~ 469 (472)
T 1ohv_A 440 -----GDKSIRFRPTLV----FRDHHAHLFLNIFSDILA 469 (472)
T ss_dssp -----TTTEEEECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred -----CCCEEEEECCCC----CCHHHHHHHHHHHHHHHH
Confidence 246899987654 458999999999998875
No 232
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.50 E-value=1e-11 Score=130.82 Aligned_cols=308 Identities=18% Similarity=0.129 Sum_probs=171.6
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc--CC
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all--~p 191 (529)
-.|+|.+|+...+......+. .+....+++ +.+++++.-.. -....+||++|+..++.... ..
T Consensus 104 ~hp~v~~Av~~q~~~~~~~~~-------~~~~~~~la----e~l~~~~p~~~----~v~f~~SGsEA~e~AiklAr~~tg 168 (454)
T 4ao9_A 104 SAPEIRDAVIEAMQGGINLTG-------HNLLEGRLA----RLICERFPQIE----QLRFTNSGTEANLMALTAALHFTG 168 (454)
T ss_dssp CCHHHHHHHHHHHHTCSCCCS-------EESSHHHHH----HHHHHHSTTCS----EEEEESSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhcCCCccC-------CcHHHHHHH----HHHHHhCCCCC----EEEEeCchHHHHHHHHHHHHhccc
Confidence 479999999887754332221 122223333 66777774322 12445899999999887542 23
Q ss_pred CCEEEEcCCCCCcc-ccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcC--CcEEEEcC--CCCCCCC
Q 009673 192 HDRIMGLDLPHGGH-LSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR--PKLIIAGA--SAYPRDF 266 (529)
Q Consensus 192 GD~Vl~~~~~~~g~-~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~~~--pklIi~~~--s~~p~~~ 266 (529)
.++|+..+-.|-|+ ...+... ......+....++ .-|.+.+++.++++. ..+||+.. .+.+...
T Consensus 169 r~~ii~~~~~yHG~t~~~~~~~-----~~~~~~~~~~~~p------~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~ 237 (454)
T 4ao9_A 169 RRKIVVFSGGYHGGVLGFGARP-----SPTTVPFDFLVLP------YNDAQTARAQIERHGPEIAVVLVEPMQGASGCIP 237 (454)
T ss_dssp CCEEEEETTCBCSTTCBBSSSB-----CTTSCCSEEEEEC------TTCHHHHHHHHHHTGGGEEEEEECSEESTTTCEE
T ss_pred CCeEEEEeCCcCCccccccccc-----cCccCCCCcccCC------CchHHHHHHHHhhcCCceEEEEeccccCCCCccC
Confidence 46787776554332 2111100 0011112233333 247899999887643 34566652 2233333
Q ss_pred C----HHHHHHHHHHhCCEEEEecccccccccccccCCCCC-cccEEEeccccccc-CCCCeEEEeeCCCcchhHHHhhh
Q 009673 267 D----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELESAI 340 (529)
Q Consensus 267 d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~~~~-~aDiv~~S~hK~l~-GprgG~i~~~~~~~~~~~l~~~i 340 (529)
+ +++|+++|++||++||+|++|. |-........-+. ..|+++.+ |.++ |...|.+.+++ ++.+.+
T Consensus 238 p~~~fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv~PDi~t~g--K~lggG~Piga~~~~~------ei~~~~ 308 (454)
T 4ao9_A 238 GQPDFLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLGIRSDLTTLG--KYIGGGMSFGAFGGRA------DVMALF 308 (454)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHTCCCSEEEEE--GGGGTTSSCEEEEECH------HHHGGG
T ss_pred CchhhHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccCCCCcEEEec--cccCCCCcceeeeeHH------HHHHHH
Confidence 3 8999999999999999999985 5332211000001 25888755 9884 45568888887 677766
Q ss_pred cccc----cCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh----cCc--EEecCCCCCceEEEc
Q 009673 341 NNAV----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGY--KLVSGGSDNHLVLVD 410 (529)
Q Consensus 341 ~~~~----~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~----~G~--~v~~~gt~~~~~~v~ 410 (529)
.... ..++.++... .++|..++|+.+.++ +..+++.++.++|.+.|++ .++ .+..-| .++-+.
T Consensus 309 ~~~~~~~~h~~T~~gnPl-a~AAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G---~m~gi~ 381 (454)
T 4ao9_A 309 DPRTGPLAHSGTFNNNVM-TMAAGYAGLTKLFTP---EAAGALAERGEALRARLNALCANEGVAMQFTGIG---SLMNAH 381 (454)
T ss_dssp CTTTCSCCCCCTTTTCHH-HHHHHHHHHHHTSCH---HHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEET---TEEEEE
T ss_pred hhccCCccccCCCCCCHH-HHHHHHHHHHHHhcc---ChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeec---eEEEEE
Confidence 5321 1222333333 333333467777653 4566777778888887765 232 121111 122222
Q ss_pred cCCC---------CCcH---HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 411 LRPM---------GIDG---ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 411 ~~~~---------~i~~---~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
+... ..+. ..+...|.+.||.+. | .+.+.++++ ++++|+++++++|++++.
T Consensus 382 f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~~----p-------~~~~~~s~~------~T~~dId~~l~al~~~l~ 444 (454)
T 4ao9_A 382 FVQGDVRSSEDLAAVDGRLRQLLFFHLLNEDIYSS----P-------RGFVVLSLP------LTDADIDRYVAAIGSFIG 444 (454)
T ss_dssp SCCSCCCSGGGGTTCCHHHHHHHHHHHHHTTEECC----T-------TCEEECCTT------CCHHHHHHHHHHHHHHHH
T ss_pred EecCCCCCHHHHHhhhHHHHHHHHHHHHHCCEEEc----C-------CCCEEEeCC------CCHHHHHHHHHHHHHHHH
Confidence 2110 1122 234455677899873 2 123444433 568999999999999987
Q ss_pred HH
Q 009673 479 IT 480 (529)
Q Consensus 479 ~~ 480 (529)
..
T Consensus 445 ~~ 446 (454)
T 4ao9_A 445 GH 446 (454)
T ss_dssp HS
T ss_pred hc
Confidence 53
No 233
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.21 E-value=3.3e-15 Score=158.38 Aligned_cols=319 Identities=13% Similarity=0.071 Sum_probs=179.1
Q ss_pred cceeEecCCC-----CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc-CCCCCCCceeeecCC
Q 009673 103 KSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-NLDENKWGVNVQPLS 176 (529)
Q Consensus 103 ~~i~L~asen-----~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~-g~~~~~~~~~V~~~s 176 (529)
..|++..+.. ..+|.|.+|+...+......+|+ ++...+++ +++++++ +.+. .+..+|
T Consensus 101 ~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~~-------~~~~~~La----e~L~~~~p~~~~-----v~~~nS 164 (465)
T 2yky_A 101 AYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLSTQ-------TENEALFA----EAVCDRFPSIDL-----VRFTNS 164 (465)
Confidence 3466655443 23789999998776543222221 12223333 6777777 4332 244578
Q ss_pred hHHHHHHHHHhh--cCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh--cCC
Q 009673 177 GSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRP 252 (529)
Q Consensus 177 Gs~A~~~~l~al--l~pGD~Vl~~~~~~~g~~s~g~~~~~~~i~~~g~~~~~v~~~v~~~~~~iD~d~le~~i~~--~~p 252 (529)
|++|+..++... ...+|+|+..+..|.|+.. +.. . .....|.....+.++ ..|+++|+++++. .++
T Consensus 165 GseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~-~~~--s-g~~~~g~~~~~~~~~------~~d~~~l~~~l~~~~~~~ 234 (465)
T 2yky_A 165 GTEANLMALATATAITGRKTVLAFDGGYHGGLL-NFA--S-GHAPTNAPYHVVLGV------YNDVEGTADLLKRHGHDC 234 (465)
Confidence 999999988765 2355999998876643311 100 0 000011100122222 2478899998873 378
Q ss_pred cEEEEcCC-CCCC-CCC----HHHHHHHHHHhCCEEEEecccccccccccccC-CCCC-cccEEEeccccccc-CCCCeE
Q 009673 253 KLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPFK-YCDVVTTTTHKSLR-GPRGGM 323 (529)
Q Consensus 253 klIi~~~s-~~p~-~~d----~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~-~~~~-~aDiv~~S~hK~l~-GprgG~ 323 (529)
++|++... ++++ ..+ +++|+++|++||++||+|++|. + ....... ..+. ..|++ |++|+++ |++.|+
T Consensus 235 aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~-r~g~~~a~~~~gv~pDi~--t~sK~lg~G~piG~ 310 (465)
T 2yky_A 235 AAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-S-RLSGGGAQEMLGISADLT--TLGKYIGGGMSFGA 310 (465)
Confidence 88888642 3333 344 8999999999999999999987 4 2111000 0011 25665 6779984 577899
Q ss_pred EEeeCCCcchhHHHhhhcc---c--ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--CcE
Q 009673 324 IFFKKDPVLGVELESAINN---A--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYK 396 (529)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~---~--~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~--G~~ 396 (529)
+++++ ++.+.+.. . ...+..+++.. ..++..++|+.+.++ .+.+++.++.+++.+.|++. .+.
T Consensus 311 v~~~~------~i~~~l~~~~~g~~~~~~T~~~npl-a~aAa~aaL~~l~~~---~~~~~~~~~~~~l~~~L~~~~~~~~ 380 (465)
T 2yky_A 311 FGGRR------DLMERFDPARDGAFAHAGTFNNNIL-TMSAGHAALTQIYTR---QAASDLSASGDRFRANLNRIAVENQ 380 (465)
Confidence 99988 56666654 1 11122223222 333333356655432 45677777788888887663 222
Q ss_pred Ee--cCCCCCceEEEccCCCCC---------c---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCC
Q 009673 397 LV--SGGSDNHLVLVDLRPMGI---------D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 462 (529)
Q Consensus 397 v~--~~gt~~~~~~v~~~~~~i---------~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~ 462 (529)
+. ..+ ...++++.+....+ + ...+.+.|.+.||.+.+ +. + . . ++ + .++
T Consensus 381 ~~~~v~g-~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p----~~---~--~-~-~s---~---~~t 442 (465)
T 2yky_A 381 APLQFTG-LGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAP----RG---M--Y-A-LS---L---EIA 442 (465)
Confidence 21 111 23344554432010 1 23466667789999843 21 0 0 1 22 1 266
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009673 463 EKEFVAIADFIHEGVEI 479 (529)
Q Consensus 463 ~~d~~~la~~i~~~~~~ 479 (529)
++|+++++++|.++++.
T Consensus 443 ~edid~~l~~l~~~l~~ 459 (465)
T 2yky_A 443 DAGRDAFAEALADFIGE 459 (465)
Confidence 89999999999888764
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.29 E-value=6.3e-09 Score=109.86 Aligned_cols=330 Identities=16% Similarity=0.147 Sum_probs=169.8
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--cC
Q 009673 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (529)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~al--l~ 190 (529)
.-.|+|.+|+...+.. +.+.. .++..++ ..++ ..+++.+++..+..+ ..+..+|||+|+..++... ..
T Consensus 80 h~~p~v~~Ai~~q~~~-~~~~~---~~~~~~~--~~~~--lae~L~~~~p~~~~~--~v~f~~sGsEA~e~AlklAr~~t 149 (456)
T 4atq_A 80 ASDPAVVAAVQEAAAH-FTHTC---FMVTPYE--GYVA--VTEQLNRLTPGDHAK--RTVLFNSGAEAVENAVKVARLAT 149 (456)
T ss_dssp TTCHHHHHHHHHHHHH-CSCCT---TTTSCCH--HHHH--HHHHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhh-ccCcc---cCccCcH--HHHH--HHHHHHHhCCCCCCc--EEEEeCChHHHHHHHHHHHhhhh
Confidence 3478899998776643 22211 1111122 2222 236677777543211 1244689999999888643 22
Q ss_pred CCCEEEEcCCCCCcccccccc--c-----cccccccccceEEEEEccc--CCCC-CCCCHHHHHHHhh-------hcCCc
Q 009673 191 PHDRIMGLDLPHGGHLSHGFM--T-----PKRRVSGTSIYFESMPYRL--DEST-GLVDYDMLEKTAI-------LFRPK 253 (529)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~g~~--~-----~~~~i~~~g~~~~~v~~~v--~~~~-~~iD~d~le~~i~-------~~~pk 253 (529)
..++|+...-.|-|.-. +.. + +.....-....+..++++. .... ...+.+.+++.+. ..++.
T Consensus 150 ~r~~ii~~~~~yHG~t~-~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iA 228 (456)
T 4atq_A 150 GRDAVVAFDHAYHGRTN-LTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVA 228 (456)
T ss_dssp CCCEEEEETTCCCCSSH-HHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEE
T ss_pred cCCeEEEEecccCCccc-cccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceE
Confidence 34678877655433210 000 0 0000000001112233322 1111 1223343333332 22456
Q ss_pred EEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEecccccccccccc-c-CCCCC-cccEEEeccccccc-CCCCeE
Q 009673 254 LIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-V-ADPFK-YCDVVTTTTHKSLR-GPRGGM 323 (529)
Q Consensus 254 lIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~-~-~~~~~-~aDiv~~S~hK~l~-GprgG~ 323 (529)
+||+..- ..++ ..-+++++++|++||++||+|+.+. |+--.|. . ...+. ..|+++.+ |.++ |...|.
T Consensus 229 AvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~t-G~GRtG~~~a~e~~gv~PDivt~g--K~lggg~P~~a 305 (456)
T 4atq_A 229 AIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQS-GFCRTGEWFAVDHEGVVPDIITMA--KGIAGGLPLSA 305 (456)
T ss_dssp EEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTCCCSEEEEC--GGGGTTSSCEE
T ss_pred EEEeccccCCCCccccchhhhHHHHHHHhhcCCceEeccccc-ccCCccccccccccCCCCchhhhh--hcccCcCCcee
Confidence 6777521 1222 2348999999999999999999964 3211111 0 00011 36998876 8884 455588
Q ss_pred EEeeCCCcchhHHHhhhcccccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----C---cE
Q 009673 324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----G---YK 396 (529)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~~~L~~~----G---~~ 396 (529)
+++++ ++.+.+......++.++......+|+ +.|+.+.++++ .+++.+..+++.+.|++. . .+
T Consensus 306 v~~~~------~i~~~~~~~~~~~Tf~gnpla~aaal-a~L~~i~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~~~~~ 375 (456)
T 4atq_A 306 ITGRA------DLLDAVHPGGLGGTYGGNPVACAAAL-AAIDTMEQHDL---NGRARHIEELALGKLRELAAELSAGGGS 375 (456)
T ss_dssp EEEEH------HHHTTSCTTSSCCSSSSCHHHHHHHH-HHHHHHHHTTH---HHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred eEecH------HHHhcccccCCCCCCCCChHHHHhhH-HHHHHHhhccH---HHHHHHHHHHHHHHHHHHHHhcccccCC
Confidence 88887 67666655444444555344334444 46776654443 445555556666666542 1 12
Q ss_pred EecC--CCCCceEEEccCCCC---Cc---HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHH
Q 009673 397 LVSG--GSDNHLVLVDLRPMG---ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVA 468 (529)
Q Consensus 397 v~~~--gt~~~~~~v~~~~~~---i~---~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~ 468 (529)
++.+ |. .-+.-+++.... -+ ...+.+.|.+.|+.+... | + ....|||.-| ++ ++++|+++
T Consensus 376 ~v~~VRG~-Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~---g---~-~~~~irl~Pp-L~---it~~~id~ 443 (456)
T 4atq_A 376 VVGDIRGR-GAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTC---G---T-YGNVIRLLPP-LV---ISDELLID 443 (456)
T ss_dssp CEEEEEEE-TTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEE---C---T-TSCEEEECCC-TT---CCHHHHHH
T ss_pred ceEEeeec-ceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEec---C---C-CCCEEEEECC-CC---CCHHHHHH
Confidence 2221 11 122333332111 11 234667778899987532 1 1 2357999744 44 57999999
Q ss_pred HHHHHHHHHH
Q 009673 469 IADFIHEGVE 478 (529)
Q Consensus 469 la~~i~~~~~ 478 (529)
+.+.|.++++
T Consensus 444 ~l~~l~~al~ 453 (456)
T 4atq_A 444 GLEVLAAAIK 453 (456)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999886
No 235
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.07 E-value=4.2e-09 Score=119.01 Aligned_cols=212 Identities=10% Similarity=-0.017 Sum_probs=116.5
Q ss_pred HHHHHHhhh-------cCCcEEEEcCC--CCCCC-C----CHHHHHHHHHHhCCEEEEecccccccccccccCC--CCC-
Q 009673 241 DMLEKTAIL-------FRPKLIIAGAS--AYPRD-F----DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK- 303 (529)
Q Consensus 241 d~le~~i~~-------~~pklIi~~~s--~~p~~-~----d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~~~--~~~- 303 (529)
++|++.+++ .++.+||+... +.++. . -+++|+++|++||++||+|++|. |+--.|..-. .+.
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~t-GfGRtG~~fa~e~~gv 655 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFT-GFWRLGVETTTELLGC 655 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTT-TTTTTSBSSTHHHHSS
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCcc-ccccCCCchhhHhcCC
Confidence 567777752 23456777642 33332 2 28999999999999999999854 3321121100 001
Q ss_pred cccEEEecccccccC--CCCeEEEeeCCCcchhHHHhhhccc------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHH
Q 009673 304 YCDVVTTTTHKSLRG--PRGGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (529)
Q Consensus 304 ~aDiv~~S~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (529)
..|+++ +.|.|+| .+.|++++++ ++.+.+... ...++.+++.....+++ ++|+.+.++++.+.
T Consensus 656 ~PDiit--lsK~L~gG~~Plgav~~~~------~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaal-a~L~~i~~~~l~~~ 726 (831)
T 4a0g_A 656 KPDIAC--FAKLLTGGMVPLAVTLATD------AVFDSFSGDSKLKALLHGHSYSAHAMGCATAA-KAIQWFKDPETNHN 726 (831)
T ss_dssp CCSEEE--ECGGGGTTSSCCEEEEECH------HHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHH-HHHHHHHCTTTCTT
T ss_pred CCcEEE--EecccccCccCcEEEEECH------HHHHHHhcccccccceeecCCcccHHHHHHHH-HHHHHHHhhHHHHH
Confidence 257875 5699965 4669999988 677766432 12223344333333333 46776654333111
Q ss_pred HHHHHH-H----HHHHHHHHHhc-CcEEecCCCCCceEEEccCCC-------CCcHHHHHHhHhcCCeEEcCCCCCCCCC
Q 009673 376 QNKVVS-N----CRALASRLVEL-GYKLVSGGSDNHLVLVDLRPM-------GIDGARVEKILDMASITLNKNSVPGDKS 442 (529)
Q Consensus 376 ~~~i~~-~----a~~l~~~L~~~-G~~v~~~gt~~~~~~v~~~~~-------~i~~~~~~~~L~~~GI~v~~~~~Pg~~~ 442 (529)
.++..+ . .+.+.+.+.+. .+.-+.+ ...+..+++... ......+.+.|.+.||.+. |+
T Consensus 727 ~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg--~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~----p~--- 797 (831)
T 4a0g_A 727 ITSQGKTLRELWDEELVQQISSHSAVQRVVV--IGTLFALELKADASNSGYASLYAKSLLIMLREDGIFTR----PL--- 797 (831)
T ss_dssp BCTTSSBBCCCSCHHHHHHHHHSTTEEEEEE--ETTEEEEEEC---------CHHHHHHHHHHHHTTEECC----CB---
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceeEee--cccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEE----ec---
Confidence 111000 0 11234445443 2322221 123344444211 1123457777888999984 32
Q ss_pred CCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHH
Q 009673 443 ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 478 (529)
Q Consensus 443 ~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~ 478 (529)
...|||..+.. ++++|++++++.|.++++
T Consensus 798 ---g~~lrl~pp~~----~t~e~id~~~~~l~~~l~ 826 (831)
T 4a0g_A 798 ---GNVIYLMCGPC----TSPEICRRLLTKLYKRLG 826 (831)
T ss_dssp ---TTEEEEECCTT----CCHHHHHHHHHHHHHHHT
T ss_pred ---CCEEEEECCCC----CCHHHHHHHHHHHHHHHH
Confidence 36899987654 458999999999988775
No 236
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=98.98 E-value=1.2e-07 Score=100.60 Aligned_cols=325 Identities=12% Similarity=0.075 Sum_probs=168.0
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhc----
Q 009673 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (529)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~G~p~~r~~~g~~~~d~lE~~a~~~la~~~g~~~~~~~~~V~~~sGs~A~~~~l~all---- 189 (529)
-.|+|.+|+...+..- .. + ..+++ ......++ + .+++.+++..+.+. .....|||+|+..++....
T Consensus 84 ~~p~v~~Ai~~q~~~l-~~-~--~~~~~-~~~~~~~~-l-Ae~L~~~~p~~~~~---v~f~~sGsEA~e~AiKlAr~~~~ 153 (473)
T 4e3q_A 84 DHKGLIDAAKAQYERF-PG-Y--HAFFG-RMSDQTVM-L-SEKLVEVSPFDSGR---VFYTNSGSEANDTMVKMLWFLHA 153 (473)
T ss_dssp CCHHHHHHHHHHHHHC-CC-C--CCCTT-EEEHHHHH-H-HHHHHHHSSCSSCE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-cc-c--ccccc-ccCHHHHH-H-HHHHHhhCCCCccE---EEEeCchHHHHHHHHHHHHHHHH
Confidence 4799999988776432 11 0 01121 11112222 3 36778887654332 2346899999998886431
Q ss_pred ---CCC-CEEEEcCCCCCcccccccc-----ccccc--cccccceEEEEEccc--C-CCCCCC-------CHHHHHHHhh
Q 009673 190 ---KPH-DRIMGLDLPHGGHLSHGFM-----TPKRR--VSGTSIYFESMPYRL--D-ESTGLV-------DYDMLEKTAI 248 (529)
Q Consensus 190 ---~pG-D~Vl~~~~~~~g~~s~g~~-----~~~~~--i~~~g~~~~~v~~~v--~-~~~~~i-------D~d~le~~i~ 248 (529)
+++ .+|+...-.|-|.- .+.. .+.+. ....+ +..+++|. . .+.+.. ..+++++.+.
T Consensus 154 ~~g~~~r~~ii~~~~~yHG~t-~~a~s~tg~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 230 (473)
T 4e3q_A 154 AEGKPQKRKILTRWNAYHGVT-AVSASMTGKPYNSVFGLPLPG--FVHLTCPHYWRYGEEGETEEQFVARLARELEETIQ 230 (473)
T ss_dssp HTTCTTCCEEEEETTCCCCSS-HHHHHHSCCGGGGGGTCSCTT--EEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCcceEEEeeceECCCc-cccccccccccccccCCCCCc--ccccCCCcccccccccchhhHHHHHHHHHHHHHHH
Confidence 344 46777765442220 0000 00000 00111 12222221 0 011111 1345566655
Q ss_pred hcC---CcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEeccccccccccccc-C-CCCC-cccEEEecccccc
Q 009673 249 LFR---PKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSL 316 (529)
Q Consensus 249 ~~~---pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~livD~ah~~Gli~~~~~-~-~~~~-~aDiv~~S~hK~l 316 (529)
... ..+||+..- ..++ ..-+++|+++|++||++||+|+.+. |+--.+.. . .-+. ..|+++.+ |.+
T Consensus 231 ~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~t-GfGRtG~~fa~e~~gv~PDi~t~~--K~l 307 (473)
T 4e3q_A 231 REGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVIC-GFGRTGNTWGCVTYDFTPDAIISS--KNL 307 (473)
T ss_dssp HHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTT-SSSTTSSSCHHHHTTCCCSEEEEC--GGG
T ss_pred hhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccc-cCCcccchhHHHhcCCCCChHHhc--ccc
Confidence 433 345666521 1222 2238999999999999999999854 43111100 0 0011 36898866 998
Q ss_pred cC--CCCeEEEeeCCCcchhHHHhhhccc-------ccCCCCCCChHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 009673 317 RG--PRGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA 387 (529)
Q Consensus 317 ~G--prgG~i~~~~~~~~~~~l~~~i~~~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~~a~~l~ 387 (529)
+| ...|.+++++ ++.+.+... ...++.++......+|+ ++|+.+.+++ ..+++.+..++|.
T Consensus 308 ~gG~~Pl~av~~~~------~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaal-a~L~~i~~~~---l~~~~~~~g~~l~ 377 (473)
T 4e3q_A 308 TAGFFPMGAVILGP------ELSKRLETAIEAIEEFPHGFTASGHPVGCAIAL-KAIDVVMNEG---LAENVRRLAPRFE 377 (473)
T ss_dssp GTTSSCCEEEEECH------HHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHH-HHHHHHHHSS---HHHHHHHHHHHHH
T ss_pred cCCCCCcccccccH------HHHHHhccccccccccccCCCCCCCcchhhhhh-hhhhhhcccc---HHHHHHHHHHHHH
Confidence 54 5668888887 565554321 11223334333333333 3577665443 3455666677788
Q ss_pred HHHHhc----CcEEecCCCCCceEEEccCCC-----CC-----cHHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEcc
Q 009673 388 SRLVEL----GYKLVSGGSDNHLVLVDLRPM-----GI-----DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS 453 (529)
Q Consensus 388 ~~L~~~----G~~v~~~gt~~~~~~v~~~~~-----~i-----~~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~ 453 (529)
+.|++. .+.-+.+ . ..+.-+++... .. -...+.+.+.+.|+.+... ...||+.-
T Consensus 378 ~~L~~l~~~~~v~~vRG-~-Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------g~~i~l~P 445 (473)
T 4e3q_A 378 ERLKHIAERPNIGEYRG-I-GFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPL----------GQSVVLCP 445 (473)
T ss_dssp HHHHHHTTSTTEEEEEE-E-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEE----------TTEEEECC
T ss_pred HHHHHHhcCCCeeEEee-c-ceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEec----------CCEEEEeC
Confidence 887662 2211111 0 11222332110 01 1345777888899987431 25789864
Q ss_pred CCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 454 PAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 454 ~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
.++ ++++|++++++.|.+++...
T Consensus 446 -PL~---it~~eid~~~~~l~~al~~v 468 (473)
T 4e3q_A 446 -PFI---LTEAQMDEMFDKLEKALDKV 468 (473)
T ss_dssp -CTT---CCHHHHHHHHHHHHHHHHHH
T ss_pred -CCC---CCHHHHHHHHHHHHHHHHHH
Confidence 444 67999999999999988754
No 237
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=44.99 E-value=19 Score=31.36 Aligned_cols=51 Identities=14% Similarity=0.006 Sum_probs=36.9
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhC
Q 009673 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (529)
Q Consensus 224 ~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g 279 (529)
|+++..+. ...++++.+.+.+++|++|.++....+....++++.+..++.|
T Consensus 47 ~eVi~lG~-----~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 47 FEVVYTGL-----RQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELG 97 (161)
T ss_dssp CEEECCCS-----BCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred CEEEECCC-----CCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcC
Confidence 57666443 3678999888888899999988665555556777777777654
No 238
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=43.42 E-value=48 Score=31.41 Aligned_cols=59 Identities=10% Similarity=0.162 Sum_probs=42.3
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC---CCCCHHHHHHHHHHhC----CEEEEec
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP---RDFDYPRMRQIADAVG----ALLMMDM 286 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p---~~~d~~~i~~ia~~~g----~~livD~ 286 (529)
+|+++.+.. .+.++++.+.+.++++++|.++....+ ....++++.+.+++.| +.+++=+
T Consensus 157 G~eVi~LG~-----~vp~e~iv~aa~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG 222 (262)
T 1xrs_B 157 MIDAYNLGS-----QVANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGG 222 (262)
T ss_dssp TEEEEECCS-----SBCHHHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEEC
T ss_pred CcEEEECCC-----CCCHHHHHHHHHHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEEC
Confidence 478877654 477899988888889999999876666 3445667777777765 5565543
No 239
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=40.54 E-value=40 Score=30.44 Aligned_cols=59 Identities=8% Similarity=0.066 Sum_probs=42.4
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhC----CEEEEec
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG----ALLMMDM 286 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g----~~livD~ 286 (529)
+++++.++. ....+++.+.+.+++|++|.++....++...++++.+..++.+ +.+++=+
T Consensus 116 G~~v~~LG~-----~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG 178 (210)
T 1y80_A 116 GFTVYNLGV-----DIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGG 178 (210)
T ss_dssp TCEEEECCS-----SBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEES
T ss_pred CCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEC
Confidence 357776553 4678999888888899999998665555556777777777765 6666543
No 240
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=37.85 E-value=46 Score=31.79 Aligned_cols=57 Identities=16% Similarity=0.288 Sum_probs=40.3
Q ss_pred CCC-CCHHHHHHHhhhc----CCcEEEEc--CCCC---CC-CCCHHHHHHHHHHhCCEEEEecccccc
Q 009673 235 TGL-VDYDMLEKTAILF----RPKLIIAG--ASAY---PR-DFDYPRMRQIADAVGALLMMDMAHISG 291 (529)
Q Consensus 235 ~~~-iD~d~le~~i~~~----~pklIi~~--~s~~---p~-~~d~~~i~~ia~~~g~~livD~ah~~G 291 (529)
++. .++++++.+++.. +++++++- .++| +. ..|+..|..+.+..+++|+.|..|..|
T Consensus 152 ~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g 219 (276)
T 1vs1_A 152 RGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAG 219 (276)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCC
Confidence 555 4888887766522 46776653 3333 33 568888888877779999999999876
No 241
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=37.79 E-value=66 Score=26.57 Aligned_cols=49 Identities=6% Similarity=-0.141 Sum_probs=37.7
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEec
Q 009673 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (529)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ 286 (529)
.++.++++..+.+ +|.+|+++.-.......-.++.+..+++|+-+-+-.
T Consensus 48 ~l~~~~l~~ll~~-~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~ 96 (122)
T 2ab1_A 48 GVQPADVKEVVEK-GVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQ 96 (122)
T ss_dssp CCCHHHHHHHHTT-CCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEEC
T ss_pred HCCHHHHHHHhhC-CCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEeC
Confidence 5889999999887 899999986655554244778888899998776643
No 242
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=36.95 E-value=35 Score=33.86 Aligned_cols=57 Identities=18% Similarity=0.216 Sum_probs=40.3
Q ss_pred CCC-CCHHHHHHHhhh----cCCcEEEEc-----CCCCCC-CCCHHHHHHHHHHhCCEEEEecccccc
Q 009673 235 TGL-VDYDMLEKTAIL----FRPKLIIAG-----ASAYPR-DFDYPRMRQIADAVGALLMMDMAHISG 291 (529)
Q Consensus 235 ~~~-iD~d~le~~i~~----~~pklIi~~-----~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~G 291 (529)
++. .++++++.+++. -+++++++. +|+|+. ..|+..|..+.+..+++|+.|..|..|
T Consensus 220 ~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G 287 (350)
T 1vr6_A 220 RGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGG 287 (350)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCc
Confidence 455 488887766642 246777772 344433 568888888877779999999999876
No 243
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=33.56 E-value=54 Score=30.98 Aligned_cols=58 Identities=16% Similarity=0.226 Sum_probs=41.5
Q ss_pred CCC-CCHHHHHHHhhhc----CCcEEEEc-----CCCCCC-CCCHHHHHHHHHHhCCEEEEeccccccc
Q 009673 235 TGL-VDYDMLEKTAILF----RPKLIIAG-----ASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGL 292 (529)
Q Consensus 235 ~~~-iD~d~le~~i~~~----~pklIi~~-----~s~~p~-~~d~~~i~~ia~~~g~~livD~ah~~Gl 292 (529)
++. .+++++..++... +++++++- .++|+. ..|+..+..+.+..+.+||.|..|..|.
T Consensus 137 ~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 137 RGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp CCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred cCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 454 3888887776422 45666653 356765 5688888888877799999999998664
No 244
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=30.85 E-value=33 Score=28.88 Aligned_cols=52 Identities=21% Similarity=0.270 Sum_probs=35.7
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhC
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g 279 (529)
+|+++.... ...++++.+.+.+.++++|.++....+....++++.+..++.|
T Consensus 31 G~~Vi~lG~-----~~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g 82 (137)
T 1ccw_A 31 GFNVVNIGV-----LSPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAG 82 (137)
T ss_dssp TCEEEEEEE-----EECHHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTT
T ss_pred CCEEEECCC-----CCCHHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcC
Confidence 357776553 3678898888887799999988666544444556666666643
No 245
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=29.45 E-value=1.2e+02 Score=27.60 Aligned_cols=49 Identities=27% Similarity=0.266 Sum_probs=32.1
Q ss_pred HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 419 ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 419 ~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
..+++.+.+.++-+++. ..+..|||.+|.+| +|.-++++..++.....+
T Consensus 100 ~~IekAI~~S~LglnP~--------~dG~~Iri~iP~LT-----eErRkelvK~ak~~~E~a 148 (209)
T 4gfq_A 100 GDIEKAILKADLGLNPS--------NDGTVIRIAFPALT-----EERRRDLVKVVKKYAEEA 148 (209)
T ss_dssp HHHHHHHHHHTSSCCCE--------ECSSCEEEECCBCC-----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCC--------cCCCceeeeCCCcc-----HHHHHHHHHHHHHHHHHH
Confidence 56778887766554332 12356999999876 577777777776655443
No 246
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=29.07 E-value=47 Score=33.42 Aligned_cols=57 Identities=19% Similarity=0.354 Sum_probs=41.3
Q ss_pred CCC-CCHHHHHHHhhhc----CCcEEEEc--CCCCCC----CCCHHHHHHHHHHhCCEEEEecccccc
Q 009673 235 TGL-VDYDMLEKTAILF----RPKLIIAG--ASAYPR----DFDYPRMRQIADAVGALLMMDMAHISG 291 (529)
Q Consensus 235 ~~~-iD~d~le~~i~~~----~pklIi~~--~s~~p~----~~d~~~i~~ia~~~g~~livD~ah~~G 291 (529)
+|. -++++++.+++.. +++++++. .+.||+ ..|+..|..+.+..+++|++|.+|..|
T Consensus 256 ~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 256 RGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTG 323 (385)
T ss_dssp CCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHC
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCC
Confidence 455 7888887666532 45777663 455654 468888888888889999999998765
No 247
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=27.43 E-value=1.8e+02 Score=25.84 Aligned_cols=50 Identities=24% Similarity=0.285 Sum_probs=32.6
Q ss_pred HHHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 418 GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 418 ~~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
-..+++.+...++-+++. . .+..|||.+|.+| +|--++++..++.....+
T Consensus 75 i~~IekAI~~SdLglnP~----~----dG~~Iri~iP~lT-----eErRkelvK~~k~~~E~a 124 (185)
T 1is1_A 75 TQKVEKAIMMSDLGLNPM----S----AGTIIRVPLPPLT-----EERRKDLVKIVRGEAEGG 124 (185)
T ss_dssp HHHHHHHHHHTTSSCCCE----E----ETTEEEEECCCCC-----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcc----c----CCCEEEEeCCCCC-----HHHHHHHHHHHHHHHHHH
Confidence 356788887766655432 1 2357999999876 577777777766655443
No 248
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=26.70 E-value=60 Score=29.58 Aligned_cols=60 Identities=8% Similarity=-0.038 Sum_probs=42.9
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEE--cCCCCCCCCCHHHHHHHHHHhC----CEEEEec
Q 009673 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA--GASAYPRDFDYPRMRQIADAVG----ALLMMDM 286 (529)
Q Consensus 222 ~~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~--~~s~~p~~~d~~~i~~ia~~~g----~~livD~ 286 (529)
.+|+++.++. .+.++++.+.+.+++|++|.+ +....++...++++.+..++.| +.+++=+
T Consensus 119 ~G~~Vi~LG~-----~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vGG 184 (215)
T 3ezx_A 119 NGFQIVDLGV-----DVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDSVKCMFGG 184 (215)
T ss_dssp TSCEEEECCS-----SCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGGSEEEEES
T ss_pred CCCeEEEcCC-----CCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCCCEEEEEC
Confidence 3468877654 367899988888889999999 6555545566888888888765 4565543
No 249
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=26.54 E-value=1.8e+02 Score=25.79 Aligned_cols=49 Identities=22% Similarity=0.165 Sum_probs=32.4
Q ss_pred HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 419 ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 419 ~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
..+++.+...++-+++. . .+..|||.+|.+| +|--++++..++.....+
T Consensus 76 ~~IekAI~~SdLglnP~----~----dG~~Iri~iP~lT-----eErRkelvK~~k~~~E~a 124 (185)
T 1dd5_A 76 SLIEKAINASDLGLNPI----N----DGNVIRLVFPSPT-----TEQREKWVKKAKEIVEEG 124 (185)
T ss_dssp HHHHHHHHHSSSCCCCE----E----CSSCEEEECCCCC-----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCcc----c----CCCEEEEeCCCCC-----HHHHHHHHHHHHHHHHHH
Confidence 56788887776655432 1 2356999999876 577777777666655443
No 250
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=26.26 E-value=1.8e+02 Score=25.89 Aligned_cols=49 Identities=16% Similarity=0.205 Sum_probs=32.3
Q ss_pred HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 419 ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 419 ~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
..+++.+...++-+++. . .+..|||.+|.+| +|--++++..++.....+
T Consensus 76 ~~IekAI~~SdLglnP~----~----dG~~Iri~iP~lT-----eErRkelvK~~k~~~E~a 124 (185)
T 1wqg_A 76 RAIETAIRNSDLGVNPT----N----DGALIRVAVPQLT-----EERRRELVKQAKHKGEEA 124 (185)
T ss_dssp HHHHHHHHHSTTCCCCE----E----CSSCEEEECCCCC-----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCcc----c----CCCEEEEeCCCCC-----HHHHHHHHHHHHHHHHHH
Confidence 56788887766655432 1 2356999999876 577777777666655443
No 251
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=25.13 E-value=54 Score=32.47 Aligned_cols=91 Identities=15% Similarity=0.120 Sum_probs=57.2
Q ss_pred CCCCCHHHHHHHhhh---cCCcEEEE-cCCCCCC---CCCHHHHHHHHHHh-CCEEEEecccccccccccccCCCCCccc
Q 009673 235 TGLVDYDMLEKTAIL---FRPKLIIA-GASAYPR---DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFKYCD 306 (529)
Q Consensus 235 ~~~iD~d~le~~i~~---~~pklIi~-~~s~~p~---~~d~~~i~~ia~~~-g~~livD~ah~~Gli~~~~~~~~~~~aD 306 (529)
+|.-++++++.+++- ...+++++ +.+.||+ ..|+..|..+.+.+ +++| .|-.|..|.... .. ...-|||
T Consensus 155 tGmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpV-g~sdHt~G~~~~-~A-AvAlGA~ 231 (349)
T 2wqp_A 155 TGMNSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAII-GLSDHTLDNYAC-LG-AVALGGS 231 (349)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEE-EEECCSSSSHHH-HH-HHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCE-EeCCCCCcHHHH-HH-HHHhCCC
Confidence 455578887766542 22367666 4677876 56899999999998 8887 578888772210 00 0001677
Q ss_pred E--EEecccccccCCCCeEEEeeC
Q 009673 307 V--VTTTTHKSLRGPRGGMIFFKK 328 (529)
Q Consensus 307 i--v~~S~hK~l~GprgG~i~~~~ 328 (529)
+ .-+++.|++.|+-+..-+-++
T Consensus 232 iIEkH~tld~a~~G~D~~~SL~p~ 255 (349)
T 2wqp_A 232 ILERHFTDRMDRPGPDIVCSMNPD 255 (349)
T ss_dssp EEEEEBCSCTTCCSTTGGGCBCHH
T ss_pred EEEeCCCccccCCCCChhhhCCHH
Confidence 5 336888888777665444444
No 252
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=25.06 E-value=36 Score=26.16 Aligned_cols=20 Identities=10% Similarity=0.185 Sum_probs=17.7
Q ss_pred HHHHHHHHHHhCCEEEEecc
Q 009673 268 YPRMRQIADAVGALLMMDMA 287 (529)
Q Consensus 268 ~~~i~~ia~~~g~~livD~a 287 (529)
-.+|.++|+++|++++.|..
T Consensus 29 A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 46899999999999999953
No 253
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=22.63 E-value=69 Score=24.24 Aligned_cols=44 Identities=16% Similarity=0.053 Sum_probs=31.6
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEe
Q 009673 240 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 285 (529)
Q Consensus 240 ~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD 285 (529)
..+..+.++..+.+++++.....| .-.+.|..+|+++|++++.-
T Consensus 16 ~~~v~kai~~gkaklViiA~D~~~--~~~~~i~~lc~~~~Ip~~~v 59 (82)
T 3v7e_A 16 TKQTVKALKRGSVKEVVVAKDADP--ILTSSVVSLAEDQGISVSMV 59 (82)
T ss_dssp HHHHHHHHTTTCEEEEEEETTSCH--HHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHcCCeeEEEEeCCCCH--HHHHHHHHHHHHcCCCEEEE
Confidence 466777787767888888644433 23567888999999987753
No 254
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=22.56 E-value=32 Score=35.11 Aligned_cols=28 Identities=14% Similarity=0.259 Sum_probs=24.5
Q ss_pred CCCCCCCCHHHHHHHHHHhCCEEEEecc
Q 009673 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (529)
Q Consensus 260 s~~p~~~d~~~i~~ia~~~g~~livD~a 287 (529)
|.+++..+++++++-|+++|+.||+|.+
T Consensus 71 ~~~Gt~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 71 TRSGNEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4566677899999999999999999975
No 255
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=22.13 E-value=1.8e+02 Score=25.85 Aligned_cols=49 Identities=24% Similarity=0.342 Sum_probs=31.9
Q ss_pred HHHHHhHhcCCeEEcCCCCCCCCCCCCCCeEEEccCCCccCCCCHHHHHHHHHHHHHHHHHH
Q 009673 419 ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480 (529)
Q Consensus 419 ~~~~~~L~~~GI~v~~~~~Pg~~~~~~~~~iRig~~~~tt~g~~~~d~~~la~~i~~~~~~~ 480 (529)
..+++.+...++-+++. ..+..|||.+|.+| +|--++++..++.....+
T Consensus 76 ~~IekAI~~SdLglnP~--------~dG~~Iri~iP~lT-----eErRkelvK~~k~~~E~a 124 (185)
T 1ise_A 76 PAVEKAIMASDLGLNPN--------SAGSDIRVPLPPLT-----EERRKDLTKIVRGEAEQA 124 (185)
T ss_dssp HHHHHHHHTTCTTCCCE--------ESSSEEEEECCCCC-----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCcc--------cCCCEEEEeCCCCC-----HHHHHHHHHHHHHHHHHH
Confidence 56778877766544332 12357999999876 577777777666655443
No 256
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=21.23 E-value=1e+02 Score=28.85 Aligned_cols=52 Identities=10% Similarity=0.114 Sum_probs=37.8
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhC
Q 009673 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (529)
Q Consensus 223 ~~~~v~~~v~~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g 279 (529)
+++++.++.+ ..++++.+.+.+++|++|.++....++...++++.+..++.+
T Consensus 151 G~~Vi~LG~~-----vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~ 202 (258)
T 2i2x_B 151 GYNVVDLGRD-----VPAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENG 202 (258)
T ss_dssp TCEEEEEEEE-----CCSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTT
T ss_pred CCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcC
Confidence 4577766542 467888888887799999998766666666778877777654
No 257
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=20.87 E-value=2e+02 Score=23.43 Aligned_cols=43 Identities=9% Similarity=0.153 Sum_probs=30.8
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCCCC-HHHHHHHHHHhCCEEEE
Q 009673 240 YDMLEKTAILFRPKLIIAGASAYPRDFD-YPRMRQIADAVGALLMM 284 (529)
Q Consensus 240 ~d~le~~i~~~~pklIi~~~s~~p~~~d-~~~i~~ia~~~g~~liv 284 (529)
..++.+.++..+.++|++.....| .+ ...|..+|+++|++++.
T Consensus 25 ~~~v~kai~~gkakLViiA~D~~~--~~~~~~l~~lc~~~~VP~~~ 68 (121)
T 2lbw_A 25 VKEVVKALRKGEKGLVVIAGDIWP--ADVISHIPVLCEDHSVPYIF 68 (121)
T ss_dssp HHHHHHHHHHSCCCEEEECTTCSC--TTHHHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHHcCCceEEEEeCCCCH--HHHHHHHHHHHHhcCCcEEE
Confidence 456677777768899988643332 23 66788999999998753
No 258
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=20.48 E-value=1.3e+02 Score=24.56 Aligned_cols=46 Identities=9% Similarity=0.309 Sum_probs=29.9
Q ss_pred CCHHHHHHHhhh--------cCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEE
Q 009673 238 VDYDMLEKTAIL--------FRPKLIIAGASAYPRDFDYPRMRQIADAVGALLM 283 (529)
Q Consensus 238 iD~d~le~~i~~--------~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li 283 (529)
.|++.+.+.+.+ ++-.-|+++.+......|+.+|.++++++|+.++
T Consensus 25 ~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 25 AEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLESPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECCSSCCHHHHHHHHHTTTCEEE
T ss_pred CCHHHHHHHHHHHHHhChHhhCCCcEEEEccccCChHHHHHHHHHHHHcCCEEE
Confidence 466666554432 2333456654333345789999999999999875
No 259
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=20.38 E-value=50 Score=26.19 Aligned_cols=20 Identities=20% Similarity=0.278 Sum_probs=17.7
Q ss_pred HHHHHHHHHHhCCEEEEecc
Q 009673 268 YPRMRQIADAVGALLMMDMA 287 (529)
Q Consensus 268 ~~~i~~ia~~~g~~livD~a 287 (529)
-.+|.++|+++|++++.|..
T Consensus 44 A~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCeEEECHH
Confidence 46899999999999999954
No 260
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=20.08 E-value=2.3e+02 Score=25.95 Aligned_cols=47 Identities=17% Similarity=0.078 Sum_probs=35.9
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEec
Q 009673 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (529)
Q Consensus 239 D~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ 286 (529)
+.+++++++.. ..+.|+++...-.....++++.+.++++|+.+++|.
T Consensus 90 ~~~~i~~~~~~-Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v 136 (232)
T 3igs_A 90 FLDDVDALAQA-GAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADC 136 (232)
T ss_dssp SHHHHHHHHHH-TCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEEC
T ss_pred cHHHHHHHHHc-CCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeC
Confidence 45677777665 788888876643333578999999999999999985
No 261
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=20.07 E-value=2.3e+02 Score=25.89 Aligned_cols=47 Identities=21% Similarity=0.133 Sum_probs=36.0
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEec
Q 009673 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (529)
Q Consensus 239 D~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~livD~ 286 (529)
+.+++++++.. ..+.|+++...-.....++++.+.+++.|..+++|.
T Consensus 90 ~~~~i~~~~~a-Gad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v 136 (229)
T 3q58_A 90 YLQDVDALAQA-GADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADC 136 (229)
T ss_dssp SHHHHHHHHHH-TCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEEC
T ss_pred cHHHHHHHHHc-CCCEEEECccccCChHHHHHHHHHHHHCCCEEEEec
Confidence 45677776665 788888876643334578999999999999999985
Done!