Query 009674
Match_columns 529
No_of_seqs 279 out of 1316
Neff 5.3
Searched_HMMs 46136
Date Thu Mar 28 15:58:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009674.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009674hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02869 fatty aldehyde decarb 100.0 2E-168 5E-173 1350.6 40.1 506 3-528 112-619 (620)
2 PF12076 Wax2_C: WAX2 C-termin 100.0 3.2E-67 7E-72 484.5 11.7 164 356-524 1-164 (164)
3 COG5322 Predicted dehydrogenas 100.0 7.8E-39 1.7E-43 317.3 15.7 234 278-526 85-351 (351)
4 PRK14982 acyl-ACP reductase; P 100.0 3.1E-38 6.7E-43 327.6 19.4 263 247-526 35-338 (340)
5 COG3000 ERG3 Sterol desaturase 99.9 8.5E-27 1.8E-31 235.7 11.8 151 18-177 95-247 (271)
6 KOG0873 C-4 sterol methyl oxid 99.9 2.6E-23 5.7E-28 208.6 11.4 161 5-177 109-272 (283)
7 KOG0872 Sterol C5 desaturase [ 99.9 8.4E-23 1.8E-27 202.7 6.5 144 16-173 126-269 (312)
8 KOG0874 Sphingolipid hydroxyla 99.7 5.4E-19 1.2E-23 171.0 0.5 147 18-174 122-273 (287)
9 PF04116 FA_hydroxylase: Fatty 99.7 4.8E-17 1E-21 141.5 7.9 113 23-144 2-114 (114)
10 cd01078 NAD_bind_H4MPT_DH NADP 99.4 3E-12 6.4E-17 122.7 11.4 166 335-520 1-194 (194)
11 PLN02434 fatty acid hydroxylas 99.0 1.9E-09 4.1E-14 107.7 12.3 136 18-167 83-230 (237)
12 KOG0539 Sphingolipid fatty aci 98.2 6.1E-06 1.3E-10 80.7 8.4 136 20-168 85-234 (240)
13 PF01488 Shikimate_DH: Shikima 97.5 0.0002 4.4E-09 65.4 6.3 92 352-448 11-113 (135)
14 PRK07424 bifunctional sterol d 97.4 0.00049 1.1E-08 74.3 8.7 140 23-165 13-174 (406)
15 COG0300 DltE Short-chain dehyd 97.4 0.00035 7.6E-09 71.4 6.9 50 351-402 4-55 (265)
16 COG4221 Short-chain alcohol de 97.4 0.00025 5.4E-09 71.5 5.5 44 354-399 7-52 (246)
17 PLN02601 beta-carotene hydroxy 97.3 0.002 4.2E-08 65.6 10.4 132 8-155 126-272 (303)
18 KOG1014 17 beta-hydroxysteroid 97.1 0.00062 1.3E-08 70.7 5.4 47 354-402 50-98 (312)
19 PRK00045 hemA glutamyl-tRNA re 97.1 0.0011 2.4E-08 71.7 7.0 153 351-519 180-361 (423)
20 TIGR00507 aroE shikimate 5-deh 97.1 0.0017 3.7E-08 65.8 7.9 124 335-464 99-241 (270)
21 PRK00258 aroE shikimate 5-dehy 97.0 0.0018 3.8E-08 66.1 7.9 125 334-464 103-248 (278)
22 PLN00203 glutamyl-tRNA reducta 96.9 0.0036 7.7E-08 69.7 9.1 210 287-518 201-449 (519)
23 PRK08618 ornithine cyclodeamin 96.8 0.0081 1.8E-07 62.8 10.8 140 299-442 64-220 (325)
24 PF13460 NAD_binding_10: NADH( 96.7 0.0031 6.8E-08 58.7 6.2 35 356-392 1-37 (183)
25 cd01065 NAD_bind_Shikimate_DH 96.6 0.0072 1.6E-07 55.2 7.7 123 336-463 2-142 (155)
26 TIGR02853 spore_dpaA dipicolin 96.6 0.012 2.6E-07 60.8 9.8 125 295-444 108-241 (287)
27 PRK13940 glutamyl-tRNA reducta 96.5 0.0033 7.2E-08 68.1 5.5 210 285-519 116-354 (414)
28 COG0169 AroE Shikimate 5-dehyd 96.4 0.0083 1.8E-07 62.0 7.2 139 335-481 106-267 (283)
29 PLN03209 translocon at the inn 96.3 0.011 2.3E-07 66.6 8.3 59 337-397 59-124 (576)
30 PRK06949 short chain dehydroge 96.3 0.0091 2E-07 58.3 6.6 46 350-397 6-53 (258)
31 PRK09186 flagellin modificatio 96.3 0.0091 2E-07 58.3 6.5 45 353-399 4-50 (256)
32 PF00670 AdoHcyase_NAD: S-aden 96.3 0.01 2.3E-07 56.6 6.6 88 352-448 22-115 (162)
33 PRK06407 ornithine cyclodeamin 96.3 0.026 5.6E-07 58.7 10.1 132 299-443 62-212 (301)
34 PF02423 OCD_Mu_crystall: Orni 96.2 0.022 4.8E-07 59.4 9.5 140 298-444 64-225 (313)
35 cd01080 NAD_bind_m-THF_DH_Cycl 96.2 0.014 3.1E-07 55.7 7.4 85 339-448 28-120 (168)
36 TIGR02371 ala_DH_arch alanine 96.2 0.05 1.1E-06 57.0 11.9 140 298-444 64-223 (325)
37 PRK07340 ornithine cyclodeamin 96.2 0.038 8.3E-07 57.3 10.9 139 298-444 61-218 (304)
38 CHL00194 ycf39 Ycf39; Provisio 96.2 0.013 2.9E-07 60.1 7.3 61 355-436 2-64 (317)
39 PRK12549 shikimate 5-dehydroge 96.1 0.016 3.4E-07 59.7 7.7 127 335-464 109-254 (284)
40 PRK08306 dipicolinate synthase 96.1 0.018 3.9E-07 59.6 8.1 87 352-447 151-244 (296)
41 cd05213 NAD_bind_Glutamyl_tRNA 96.1 0.012 2.7E-07 61.0 6.8 148 285-448 113-277 (311)
42 PRK06482 short chain dehydroge 96.1 0.014 3.1E-07 58.0 6.9 43 354-398 3-47 (276)
43 PRK12548 shikimate 5-dehydroge 96.1 0.018 3.9E-07 59.3 7.6 62 335-399 108-175 (289)
44 PRK05867 short chain dehydroge 96.0 0.013 2.7E-07 57.6 6.2 45 352-398 8-54 (253)
45 PRK08339 short chain dehydroge 96.0 0.011 2.4E-07 58.9 6.0 45 353-399 8-54 (263)
46 PRK08265 short chain dehydroge 96.0 0.016 3.4E-07 57.5 7.0 44 353-398 6-51 (261)
47 PRK08063 enoyl-(acyl carrier p 96.0 0.013 2.9E-07 56.9 6.2 42 354-397 5-49 (250)
48 COG1086 Predicted nucleoside-d 96.0 0.033 7.1E-07 62.3 9.6 122 293-436 170-323 (588)
49 KOG1370 S-adenosylhomocysteine 95.9 0.019 4.2E-07 59.9 7.1 151 353-513 214-395 (434)
50 PRK07523 gluconate 5-dehydroge 95.9 0.019 4.1E-07 56.3 6.6 45 352-398 9-55 (255)
51 PF10520 Kua-UEV1_localn: Kua- 95.9 0.014 3E-07 56.5 5.5 56 104-164 98-156 (178)
52 PRK07454 short chain dehydroge 95.8 0.017 3.8E-07 56.0 6.2 44 353-398 6-51 (241)
53 PRK06141 ornithine cyclodeamin 95.8 0.068 1.5E-06 55.7 10.9 137 299-443 62-219 (314)
54 PRK06196 oxidoreductase; Provi 95.8 0.018 3.9E-07 59.0 6.4 56 341-398 14-71 (315)
55 PRK06924 short chain dehydroge 95.8 0.021 4.6E-07 55.7 6.6 41 354-396 2-45 (251)
56 PRK12429 3-hydroxybutyrate deh 95.8 0.02 4.4E-07 55.7 6.3 42 354-397 5-48 (258)
57 PRK06046 alanine dehydrogenase 95.7 0.085 1.8E-06 55.2 11.2 141 298-444 65-224 (326)
58 TIGR01035 hemA glutamyl-tRNA r 95.7 0.028 6E-07 60.9 7.7 152 352-519 179-358 (417)
59 PRK07478 short chain dehydroge 95.7 0.021 4.5E-07 56.0 6.2 44 353-398 6-51 (254)
60 COG0373 HemA Glutamyl-tRNA red 95.7 0.014 3E-07 63.3 5.2 89 352-448 177-278 (414)
61 PF03446 NAD_binding_2: NAD bi 95.7 0.0071 1.5E-07 56.7 2.7 102 354-465 2-124 (163)
62 PRK07326 short chain dehydroge 95.7 0.024 5.3E-07 54.6 6.5 45 353-399 6-52 (237)
63 PRK08267 short chain dehydroge 95.7 0.024 5.3E-07 55.7 6.6 43 354-398 2-46 (260)
64 PRK06823 ornithine cyclodeamin 95.7 0.11 2.3E-06 54.5 11.7 138 299-443 64-222 (315)
65 TIGR01963 PHB_DH 3-hydroxybuty 95.7 0.021 4.6E-07 55.4 6.0 42 354-397 2-45 (255)
66 TIGR00518 alaDH alanine dehydr 95.7 0.058 1.2E-06 57.6 9.7 92 353-448 167-271 (370)
67 PRK07067 sorbitol dehydrogenas 95.6 0.027 5.9E-07 55.3 6.7 44 353-398 6-51 (257)
68 PRK08643 acetoin reductase; Va 95.6 0.025 5.5E-07 55.4 6.3 43 354-398 3-47 (256)
69 PRK06200 2,3-dihydroxy-2,3-dih 95.6 0.03 6.6E-07 55.2 6.9 44 353-398 6-51 (263)
70 PLN02780 ketoreductase/ oxidor 95.6 0.015 3.2E-07 60.4 4.9 45 353-399 53-99 (320)
71 PRK07890 short chain dehydroge 95.6 0.023 5E-07 55.5 5.9 44 353-398 5-50 (258)
72 PRK06194 hypothetical protein; 95.6 0.025 5.3E-07 56.5 6.2 43 354-398 7-51 (287)
73 PRK07109 short chain dehydroge 95.6 0.024 5.3E-07 59.0 6.3 45 352-398 7-53 (334)
74 PRK07589 ornithine cyclodeamin 95.6 0.093 2E-06 55.8 10.7 139 298-443 65-225 (346)
75 PRK07231 fabG 3-ketoacyl-(acyl 95.5 0.033 7.2E-07 54.0 6.8 44 353-398 5-50 (251)
76 PRK06180 short chain dehydroge 95.5 0.036 7.9E-07 55.4 7.0 43 353-397 4-48 (277)
77 PRK08085 gluconate 5-dehydroge 95.4 0.034 7.4E-07 54.5 6.6 45 352-398 8-54 (254)
78 PRK05717 oxidoreductase; Valid 95.4 0.044 9.6E-07 53.8 7.3 45 352-398 9-55 (255)
79 PLN02968 Probable N-acetyl-gam 95.4 0.023 5E-07 61.1 5.7 138 352-497 37-196 (381)
80 PRK06500 short chain dehydroge 95.4 0.038 8.3E-07 53.6 6.8 44 353-398 6-51 (249)
81 PRK06101 short chain dehydroge 95.4 0.023 5E-07 55.5 5.3 41 354-396 2-44 (240)
82 PRK06139 short chain dehydroge 95.4 0.028 6E-07 58.8 6.1 44 353-398 7-52 (330)
83 PRK09291 short chain dehydroge 95.4 0.034 7.3E-07 54.3 6.3 41 354-396 3-45 (257)
84 PRK05866 short chain dehydroge 95.4 0.037 8E-07 56.4 6.8 43 353-397 40-84 (293)
85 PRK14175 bifunctional 5,10-met 95.4 0.053 1.1E-06 56.2 7.9 148 283-456 44-245 (286)
86 PRK06199 ornithine cyclodeamin 95.3 0.11 2.5E-06 55.7 10.6 155 299-459 92-278 (379)
87 TIGR03325 BphB_TodD cis-2,3-di 95.3 0.043 9.2E-07 54.3 6.9 43 353-397 5-49 (262)
88 PRK08213 gluconate 5-dehydroge 95.3 0.036 7.9E-07 54.5 6.4 43 353-397 12-56 (259)
89 PRK07774 short chain dehydroge 95.3 0.039 8.4E-07 53.7 6.5 43 353-397 6-50 (250)
90 PRK10538 malonic semialdehyde 95.3 0.04 8.8E-07 54.0 6.7 42 355-398 2-45 (248)
91 PRK06124 gluconate 5-dehydroge 95.3 0.039 8.4E-07 54.1 6.5 46 351-398 9-56 (256)
92 TIGR02415 23BDH acetoin reduct 95.3 0.035 7.6E-07 54.1 6.1 43 354-398 1-45 (254)
93 COG0702 Predicted nucleoside-d 95.3 0.035 7.5E-07 54.5 6.1 38 355-394 2-41 (275)
94 PTZ00075 Adenosylhomocysteinas 95.2 0.082 1.8E-06 58.4 9.3 141 350-502 251-419 (476)
95 PRK14192 bifunctional 5,10-met 95.2 0.083 1.8E-06 54.6 8.8 126 279-447 100-234 (283)
96 PRK12826 3-ketoacyl-(acyl-carr 95.2 0.04 8.7E-07 53.2 6.2 43 354-398 7-51 (251)
97 PRK08416 7-alpha-hydroxysteroi 95.2 0.037 8.1E-07 54.7 6.0 44 353-398 8-54 (260)
98 PRK07097 gluconate 5-dehydroge 95.2 0.045 9.7E-07 54.2 6.6 49 348-398 5-55 (265)
99 cd05212 NAD_bind_m-THF_DH_Cycl 95.2 0.073 1.6E-06 49.6 7.5 74 348-447 23-103 (140)
100 PRK07102 short chain dehydroge 95.2 0.041 8.8E-07 53.6 6.1 42 354-397 2-45 (243)
101 PRK05653 fabG 3-ketoacyl-(acyl 95.1 0.043 9.4E-07 52.6 6.2 42 354-397 6-49 (246)
102 PRK08251 short chain dehydroge 95.1 0.051 1.1E-06 52.9 6.7 44 354-399 3-48 (248)
103 PRK07825 short chain dehydroge 95.1 0.031 6.8E-07 55.5 5.3 44 353-398 5-50 (273)
104 PRK07063 short chain dehydroge 95.1 0.027 6E-07 55.4 4.8 45 353-399 7-53 (260)
105 PLN02896 cinnamyl-alcohol dehy 95.1 0.059 1.3E-06 56.0 7.4 48 347-396 4-53 (353)
106 PRK07677 short chain dehydroge 95.0 0.047 1E-06 53.5 6.2 43 354-398 2-46 (252)
107 PRK06947 glucose-1-dehydrogena 95.0 0.049 1.1E-06 53.0 6.3 42 354-397 3-47 (248)
108 PRK09072 short chain dehydroge 95.0 0.056 1.2E-06 53.4 6.7 43 353-397 5-49 (263)
109 PRK07024 short chain dehydroge 95.0 0.04 8.6E-07 54.3 5.6 44 354-399 3-48 (257)
110 PRK05854 short chain dehydroge 95.0 0.03 6.5E-07 57.6 5.0 44 353-398 14-59 (313)
111 COG2423 Predicted ornithine cy 95.0 0.13 2.7E-06 54.5 9.5 158 297-461 65-251 (330)
112 PRK05557 fabG 3-ketoacyl-(acyl 95.0 0.058 1.3E-06 51.8 6.5 43 353-397 5-50 (248)
113 PF00106 adh_short: short chai 95.0 0.047 1E-06 49.7 5.6 43 354-398 1-48 (167)
114 PF05368 NmrA: NmrA-like famil 95.0 0.046 1E-06 53.3 5.9 39 356-396 1-43 (233)
115 KOG1208 Dehydrogenases with di 95.0 0.03 6.6E-07 58.7 4.8 53 345-399 27-81 (314)
116 PRK07074 short chain dehydroge 94.9 0.059 1.3E-06 52.8 6.6 43 354-398 3-47 (257)
117 PRK05876 short chain dehydroge 94.9 0.052 1.1E-06 54.7 6.4 44 353-398 6-51 (275)
118 PRK07453 protochlorophyllide o 94.9 0.057 1.2E-06 55.4 6.7 44 353-398 6-51 (322)
119 PLN02986 cinnamyl-alcohol dehy 94.9 0.047 1E-06 55.7 6.1 38 354-393 6-45 (322)
120 PRK12746 short chain dehydroge 94.9 0.056 1.2E-06 52.8 6.4 42 354-397 7-51 (254)
121 PRK06138 short chain dehydroge 94.9 0.064 1.4E-06 52.1 6.7 44 353-398 5-50 (252)
122 PRK12384 sorbitol-6-phosphate 94.9 0.054 1.2E-06 53.2 6.2 43 354-398 3-47 (259)
123 PRK12939 short chain dehydroge 94.9 0.063 1.4E-06 51.9 6.6 43 353-397 7-51 (250)
124 PRK13394 3-hydroxybutyrate deh 94.9 0.057 1.2E-06 52.8 6.3 43 353-397 7-51 (262)
125 PRK06172 short chain dehydroge 94.9 0.054 1.2E-06 53.0 6.1 43 353-397 7-51 (253)
126 PRK06935 2-deoxy-D-gluconate 3 94.9 0.063 1.4E-06 52.8 6.6 44 351-397 13-58 (258)
127 PRK08277 D-mannonate oxidoredu 94.9 0.055 1.2E-06 53.9 6.2 44 353-398 10-55 (278)
128 PRK05993 short chain dehydroge 94.8 0.041 8.9E-07 55.1 5.3 41 354-396 5-47 (277)
129 PRK08340 glucose-1-dehydrogena 94.8 0.038 8.2E-07 54.6 4.9 42 355-398 2-45 (259)
130 TIGR00561 pntA NAD(P) transhyd 94.8 0.083 1.8E-06 58.9 8.0 181 296-498 104-337 (511)
131 PRK05872 short chain dehydroge 94.8 0.05 1.1E-06 55.3 5.9 46 352-399 8-55 (296)
132 TIGR01809 Shik-DH-AROM shikima 94.8 0.099 2.2E-06 53.7 8.0 127 335-464 105-258 (282)
133 PRK05884 short chain dehydroge 94.8 0.042 9.2E-07 53.5 5.1 41 355-397 2-44 (223)
134 TIGR01472 gmd GDP-mannose 4,6- 94.8 0.044 9.5E-07 56.6 5.5 29 354-384 1-29 (343)
135 PRK08589 short chain dehydroge 94.8 0.055 1.2E-06 54.1 6.0 43 353-398 6-50 (272)
136 PRK06125 short chain dehydroge 94.8 0.058 1.2E-06 53.1 6.1 45 353-399 7-53 (259)
137 PRK07831 short chain dehydroge 94.8 0.06 1.3E-06 53.1 6.2 45 353-398 17-63 (262)
138 PF02719 Polysacc_synt_2: Poly 94.8 0.039 8.6E-07 57.4 5.0 78 356-443 1-86 (293)
139 PRK05650 short chain dehydroge 94.7 0.064 1.4E-06 53.3 6.3 41 355-397 2-44 (270)
140 TIGR03206 benzo_BadH 2-hydroxy 94.7 0.068 1.5E-06 51.9 6.4 43 353-397 3-47 (250)
141 PRK08017 oxidoreductase; Provi 94.7 0.046 1E-06 53.3 5.2 40 354-395 3-44 (256)
142 PRK07814 short chain dehydroge 94.7 0.072 1.6E-06 52.8 6.6 44 352-397 9-54 (263)
143 PRK09135 pteridine reductase; 94.7 0.069 1.5E-06 51.5 6.3 43 353-397 6-51 (249)
144 PRK07062 short chain dehydroge 94.7 0.043 9.3E-07 54.1 4.8 46 352-399 7-54 (265)
145 PRK07666 fabG 3-ketoacyl-(acyl 94.7 0.077 1.7E-06 51.4 6.5 43 353-397 7-51 (239)
146 PRK14179 bifunctional 5,10-met 94.6 0.049 1.1E-06 56.4 5.2 147 284-456 45-245 (284)
147 PRK12936 3-ketoacyl-(acyl-carr 94.6 0.09 1.9E-06 50.7 6.8 43 353-397 6-50 (245)
148 PRK07775 short chain dehydroge 94.6 0.08 1.7E-06 52.9 6.6 44 352-397 9-54 (274)
149 PRK12829 short chain dehydroge 94.6 0.053 1.1E-06 53.0 5.3 45 352-398 10-56 (264)
150 PRK06484 short chain dehydroge 94.5 0.082 1.8E-06 57.7 7.1 46 352-399 268-315 (520)
151 PRK05599 hypothetical protein; 94.5 0.062 1.3E-06 53.0 5.6 42 355-399 2-45 (246)
152 PF01210 NAD_Gly3P_dh_N: NAD-d 94.5 0.1 2.2E-06 48.7 6.7 63 355-421 1-75 (157)
153 PRK07832 short chain dehydroge 94.5 0.063 1.4E-06 53.4 5.6 43 354-398 1-45 (272)
154 PRK06057 short chain dehydroge 94.5 0.062 1.3E-06 52.8 5.4 44 353-398 7-52 (255)
155 PRK05476 S-adenosyl-L-homocyst 94.5 0.17 3.7E-06 55.3 9.2 138 350-499 209-373 (425)
156 PLN02253 xanthoxin dehydrogena 94.4 0.082 1.8E-06 52.7 6.3 45 353-399 18-64 (280)
157 KOG1205 Predicted dehydrogenas 94.4 0.053 1.1E-06 56.1 5.0 43 353-397 12-56 (282)
158 PRK12749 quinate/shikimate deh 94.4 0.13 2.7E-06 53.3 7.7 168 273-464 63-260 (288)
159 PRK14174 bifunctional 5,10-met 94.4 0.17 3.8E-06 52.7 8.8 138 283-447 43-238 (295)
160 COG2910 Putative NADH-flavin r 94.4 0.096 2.1E-06 51.4 6.4 139 355-499 2-201 (211)
161 PRK06182 short chain dehydroge 94.4 0.066 1.4E-06 53.3 5.5 41 353-395 3-45 (273)
162 PRK08642 fabG 3-ketoacyl-(acyl 94.4 0.11 2.4E-06 50.5 6.9 44 353-398 5-51 (253)
163 PRK00676 hemA glutamyl-tRNA re 94.4 0.067 1.4E-06 56.7 5.7 138 285-448 110-265 (338)
164 PRK08862 short chain dehydroge 94.4 0.056 1.2E-06 53.1 4.9 43 353-397 5-49 (227)
165 PRK06181 short chain dehydroge 94.4 0.092 2E-06 51.6 6.4 42 354-397 2-45 (263)
166 PF01118 Semialdhyde_dh: Semia 94.4 0.071 1.5E-06 47.6 5.1 98 355-457 1-109 (121)
167 PRK07576 short chain dehydroge 94.3 0.099 2.2E-06 52.0 6.6 44 352-397 8-53 (264)
168 PRK05875 short chain dehydroge 94.3 0.067 1.5E-06 53.1 5.4 44 352-397 6-51 (276)
169 PRK12825 fabG 3-ketoacyl-(acyl 94.3 0.09 2E-06 50.4 6.1 41 354-396 7-50 (249)
170 PRK12828 short chain dehydroge 94.3 0.066 1.4E-06 51.2 5.2 42 353-396 7-50 (239)
171 PRK12742 oxidoreductase; Provi 94.3 0.073 1.6E-06 51.3 5.4 44 353-398 6-52 (237)
172 PRK08703 short chain dehydroge 94.3 0.061 1.3E-06 52.2 4.9 44 353-398 6-51 (239)
173 PRK07806 short chain dehydroge 94.3 0.098 2.1E-06 50.9 6.3 43 353-397 6-51 (248)
174 PLN00198 anthocyanidin reducta 94.2 0.098 2.1E-06 53.9 6.5 42 349-392 5-48 (338)
175 TIGR01289 LPOR light-dependent 94.2 0.12 2.5E-06 53.3 7.1 44 353-398 3-49 (314)
176 PLN02583 cinnamoyl-CoA reducta 94.2 0.13 2.9E-06 52.3 7.3 31 352-384 5-35 (297)
177 PRK08628 short chain dehydroge 94.2 0.1 2.2E-06 51.1 6.3 42 352-396 6-49 (258)
178 TIGR02992 ectoine_eutC ectoine 94.1 0.13 2.8E-06 54.0 7.2 117 320-443 86-224 (326)
179 PLN02662 cinnamyl-alcohol dehy 94.1 0.083 1.8E-06 53.6 5.6 34 354-389 5-40 (322)
180 TIGR03589 PseB UDP-N-acetylglu 94.1 0.12 2.5E-06 53.5 6.8 42 354-397 5-50 (324)
181 PRK08263 short chain dehydroge 94.1 0.085 1.8E-06 52.6 5.5 43 354-398 4-48 (275)
182 PRK08303 short chain dehydroge 94.1 0.095 2.1E-06 54.0 6.0 43 353-397 8-62 (305)
183 PF02737 3HCDH_N: 3-hydroxyacy 94.0 0.086 1.9E-06 50.6 5.3 39 355-396 1-41 (180)
184 PRK08177 short chain dehydroge 94.0 0.073 1.6E-06 51.4 4.8 40 354-395 2-43 (225)
185 PRK00066 ldh L-lactate dehydro 94.0 0.058 1.3E-06 56.4 4.2 68 351-421 4-79 (315)
186 PRK07904 short chain dehydroge 94.0 0.098 2.1E-06 52.0 5.7 45 353-399 8-56 (253)
187 PRK07035 short chain dehydroge 94.0 0.089 1.9E-06 51.4 5.3 44 353-398 8-53 (252)
188 PRK08945 putative oxoacyl-(acy 93.9 0.071 1.5E-06 52.0 4.5 45 352-398 11-57 (247)
189 PRK14190 bifunctional 5,10-met 93.9 0.12 2.5E-06 53.7 6.3 148 283-456 44-245 (284)
190 PRK09134 short chain dehydroge 93.9 0.14 3.1E-06 50.3 6.7 44 352-397 8-54 (258)
191 PRK14027 quinate/shikimate deh 93.9 0.23 4.9E-06 51.3 8.4 63 335-400 109-174 (283)
192 PRK12550 shikimate 5-dehydroge 93.9 0.18 3.8E-06 51.9 7.5 120 335-464 105-243 (272)
193 PRK06197 short chain dehydroge 93.9 0.077 1.7E-06 53.9 4.9 44 352-397 15-60 (306)
194 PRK05786 fabG 3-ketoacyl-(acyl 93.9 0.094 2E-06 50.6 5.3 42 354-397 6-49 (238)
195 PRK05693 short chain dehydroge 93.8 0.093 2E-06 52.2 5.3 41 354-396 2-44 (274)
196 TIGR02685 pter_reduc_Leis pter 93.8 0.1 2.2E-06 51.8 5.5 44 354-399 2-48 (267)
197 PLN02427 UDP-apiose/xylose syn 93.8 0.14 3.1E-06 53.9 6.9 43 350-394 11-56 (386)
198 PRK06953 short chain dehydroge 93.8 0.091 2E-06 50.6 5.0 40 354-395 2-43 (222)
199 PRK06914 short chain dehydroge 93.8 0.099 2.1E-06 52.0 5.4 42 354-397 4-47 (280)
200 PRK14185 bifunctional 5,10-met 93.8 0.39 8.4E-06 50.1 9.8 140 282-447 42-236 (293)
201 PLN02650 dihydroflavonol-4-red 93.8 0.13 2.7E-06 53.4 6.3 42 352-395 4-47 (351)
202 PRK08278 short chain dehydroge 93.7 0.11 2.5E-06 51.9 5.8 34 353-388 6-41 (273)
203 PF02826 2-Hacid_dh_C: D-isome 93.7 0.13 2.8E-06 49.0 5.9 86 352-448 35-135 (178)
204 TIGR01832 kduD 2-deoxy-D-gluco 93.7 0.14 2.9E-06 49.9 6.1 31 352-384 4-34 (248)
205 PRK12937 short chain dehydroge 93.7 0.16 3.5E-06 49.0 6.5 43 353-397 5-50 (245)
206 PRK07060 short chain dehydroge 93.7 0.13 2.8E-06 49.7 5.8 44 352-397 8-53 (245)
207 PRK12827 short chain dehydroge 93.7 0.16 3.5E-06 49.0 6.5 43 353-397 6-54 (249)
208 PRK07819 3-hydroxybutyryl-CoA 93.7 0.073 1.6E-06 54.7 4.3 88 354-444 6-122 (286)
209 PRK09242 tropinone reductase; 93.7 0.095 2.1E-06 51.5 4.9 44 353-398 9-54 (257)
210 PRK07985 oxidoreductase; Provi 93.7 0.13 2.8E-06 52.4 6.1 42 353-396 49-94 (294)
211 PRK08291 ectoine utilization p 93.6 0.21 4.4E-06 52.4 7.5 117 320-443 89-227 (330)
212 PRK12743 oxidoreductase; Provi 93.6 0.15 3.3E-06 50.2 6.2 42 354-397 3-47 (256)
213 PRK06123 short chain dehydroge 93.6 0.15 3.2E-06 49.5 6.1 42 354-397 3-47 (248)
214 COG0451 WcaG Nucleoside-diphos 93.6 0.06 1.3E-06 53.9 3.4 101 355-491 2-108 (314)
215 PRK08690 enoyl-(acyl carrier p 93.5 0.16 3.4E-06 50.6 6.4 32 353-384 6-37 (261)
216 PLN02686 cinnamoyl-CoA reducta 93.5 0.16 3.5E-06 53.6 6.7 42 351-394 51-94 (367)
217 COG1748 LYS9 Saccharopine dehy 93.5 0.13 2.8E-06 55.6 5.9 88 354-444 2-100 (389)
218 PRK09730 putative NAD(P)-bindi 93.4 0.17 3.7E-06 48.9 6.2 42 354-397 2-46 (247)
219 PRK06128 oxidoreductase; Provi 93.4 0.15 3.1E-06 52.0 5.9 43 353-397 55-101 (300)
220 PRK12745 3-ketoacyl-(acyl-carr 93.3 0.18 4E-06 49.1 6.3 41 354-396 3-46 (256)
221 PLN00141 Tic62-NAD(P)-related 93.3 0.12 2.5E-06 51.2 4.9 39 353-393 17-57 (251)
222 PRK14178 bifunctional 5,10-met 93.3 0.29 6.2E-06 50.7 7.9 139 283-447 38-227 (279)
223 TIGR01746 Thioester-redct thio 93.3 0.13 2.9E-06 52.2 5.5 32 355-388 1-36 (367)
224 PRK06113 7-alpha-hydroxysteroi 93.3 0.13 2.7E-06 50.6 5.1 44 352-397 10-55 (255)
225 PRK09260 3-hydroxybutyryl-CoA 93.3 0.14 2.9E-06 52.4 5.5 92 354-448 2-123 (288)
226 PRK06484 short chain dehydroge 93.3 0.19 4.2E-06 54.9 7.1 46 352-399 4-51 (520)
227 PRK05565 fabG 3-ketoacyl-(acyl 93.3 0.2 4.4E-06 48.2 6.5 43 353-397 5-50 (247)
228 PRK14194 bifunctional 5,10-met 93.3 0.2 4.2E-06 52.5 6.7 160 283-469 45-267 (301)
229 PRK06198 short chain dehydroge 93.3 0.18 3.9E-06 49.4 6.2 43 353-397 6-51 (260)
230 PRK12481 2-deoxy-D-gluconate 3 93.3 0.16 3.4E-06 50.2 5.8 31 352-384 7-37 (251)
231 PLN03139 formate dehydrogenase 93.2 0.051 1.1E-06 58.6 2.4 154 296-459 140-322 (386)
232 PRK14189 bifunctional 5,10-met 93.2 0.18 3.8E-06 52.4 6.2 146 284-455 45-244 (285)
233 PRK08264 short chain dehydroge 93.2 0.11 2.5E-06 50.1 4.6 38 353-392 6-46 (238)
234 PRK06603 enoyl-(acyl carrier p 93.2 0.17 3.7E-06 50.3 6.0 44 354-397 9-57 (260)
235 PRK09496 trkA potassium transp 93.1 0.34 7.4E-06 52.0 8.6 85 297-397 178-274 (453)
236 PLN02214 cinnamoyl-CoA reducta 93.1 0.23 4.9E-06 51.8 6.9 35 353-389 10-46 (342)
237 PRK06997 enoyl-(acyl carrier p 93.1 0.14 3.1E-06 51.0 5.2 46 353-398 6-56 (260)
238 TIGR01500 sepiapter_red sepiap 93.1 0.13 2.7E-06 50.8 4.7 43 355-399 2-50 (256)
239 PRK07370 enoyl-(acyl carrier p 93.0 0.18 3.8E-06 50.2 5.8 32 353-384 6-37 (258)
240 PRK06505 enoyl-(acyl carrier p 93.0 0.16 3.4E-06 51.2 5.5 35 353-387 7-43 (271)
241 PRK08936 glucose-1-dehydrogena 93.0 0.21 4.5E-06 49.2 6.3 43 353-397 7-52 (261)
242 PRK06841 short chain dehydroge 93.0 0.17 3.6E-06 49.4 5.5 36 352-389 14-51 (255)
243 PRK07201 short chain dehydroge 93.0 0.18 4E-06 56.6 6.4 43 353-397 371-415 (657)
244 PRK07889 enoyl-(acyl carrier p 93.0 0.23 5E-06 49.3 6.4 45 353-399 7-57 (256)
245 PRK07792 fabG 3-ketoacyl-(acyl 92.9 0.23 5.1E-06 50.8 6.7 44 352-397 11-57 (306)
246 PLN02494 adenosylhomocysteinas 92.9 0.77 1.7E-05 50.9 10.9 156 332-500 232-418 (477)
247 PRK07023 short chain dehydroge 92.9 0.2 4.4E-06 48.7 5.9 33 354-388 2-36 (243)
248 PLN02730 enoyl-[acyl-carrier-p 92.9 0.15 3.3E-06 52.9 5.3 47 352-398 8-55 (303)
249 cd01075 NAD_bind_Leu_Phe_Val_D 92.9 0.58 1.3E-05 45.7 9.0 84 352-443 27-115 (200)
250 PRK14193 bifunctional 5,10-met 92.9 0.19 4.1E-06 52.2 5.8 161 283-469 44-264 (284)
251 PRK07069 short chain dehydroge 92.8 0.13 2.8E-06 49.9 4.4 41 356-398 2-45 (251)
252 PRK08594 enoyl-(acyl carrier p 92.8 0.17 3.7E-06 50.3 5.3 46 353-398 7-57 (257)
253 PRK15461 NADH-dependent gamma- 92.8 0.13 2.8E-06 53.0 4.5 102 355-466 3-126 (296)
254 KOG0725 Reductases with broad 92.8 0.24 5.1E-06 50.8 6.4 45 352-398 7-53 (270)
255 PLN02989 cinnamyl-alcohol dehy 92.8 0.2 4.4E-06 51.1 6.0 39 353-393 5-45 (325)
256 PRK08219 short chain dehydroge 92.7 0.16 3.5E-06 48.4 4.8 41 354-397 4-46 (227)
257 PRK06114 short chain dehydroge 92.7 0.29 6.3E-06 48.1 6.8 44 352-397 7-53 (254)
258 PF03807 F420_oxidored: NADP o 92.7 0.25 5.5E-06 41.6 5.4 58 355-421 1-67 (96)
259 cd01076 NAD_bind_1_Glu_DH NAD( 92.6 0.78 1.7E-05 45.9 9.7 78 352-434 30-128 (227)
260 PRK06179 short chain dehydroge 92.6 0.14 3.1E-06 50.6 4.4 36 354-391 5-42 (270)
261 TIGR00936 ahcY adenosylhomocys 92.6 0.47 1E-05 51.6 8.6 157 331-500 172-357 (406)
262 PRK06463 fabG 3-ketoacyl-(acyl 92.6 0.19 4.1E-06 49.3 5.2 41 353-395 7-50 (255)
263 PRK05855 short chain dehydroge 92.5 0.25 5.5E-06 53.9 6.6 44 353-398 315-360 (582)
264 PF10727 Rossmann-like: Rossma 92.5 0.15 3.3E-06 46.8 4.1 66 353-427 10-83 (127)
265 TIGR01831 fabG_rel 3-oxoacyl-( 92.5 0.22 4.8E-06 48.1 5.5 40 356-397 1-43 (239)
266 PF01262 AlaDh_PNT_C: Alanine 92.4 0.22 4.8E-06 47.0 5.3 92 353-448 20-143 (168)
267 PRK12823 benD 1,6-dihydroxycyc 92.4 0.27 5.8E-06 48.3 6.0 42 353-397 8-51 (260)
268 PRK14191 bifunctional 5,10-met 92.4 0.26 5.7E-06 51.1 6.2 149 283-455 43-243 (285)
269 PRK14182 bifunctional 5,10-met 92.3 0.25 5.4E-06 51.3 5.9 160 284-469 43-262 (282)
270 PRK14187 bifunctional 5,10-met 92.3 0.22 4.8E-06 51.9 5.6 138 284-447 45-235 (294)
271 PRK07530 3-hydroxybutyryl-CoA 92.3 0.28 6.1E-06 50.1 6.3 39 354-395 5-45 (292)
272 PRK12747 short chain dehydroge 92.3 0.19 4.2E-06 49.1 4.9 43 353-397 4-49 (252)
273 PRK14170 bifunctional 5,10-met 92.3 0.26 5.6E-06 51.2 5.9 148 282-455 42-243 (284)
274 PRK15181 Vi polysaccharide bio 92.2 0.29 6.3E-06 51.0 6.4 31 352-384 14-44 (348)
275 PRK12744 short chain dehydroge 92.2 0.19 4.1E-06 49.4 4.7 30 353-384 8-37 (257)
276 TIGR01829 AcAcCoA_reduct aceto 92.2 0.31 6.6E-06 46.9 6.0 41 354-396 1-44 (242)
277 PRK07791 short chain dehydroge 92.2 0.32 6.8E-06 49.3 6.4 44 353-398 6-60 (286)
278 PRK08217 fabG 3-ketoacyl-(acyl 92.2 0.24 5.2E-06 47.9 5.3 43 353-397 5-49 (253)
279 PRK08268 3-hydroxy-acyl-CoA de 92.1 0.29 6.2E-06 54.6 6.5 94 352-448 6-128 (507)
280 TIGR01505 tartro_sem_red 2-hyd 92.1 0.2 4.2E-06 51.2 4.8 83 356-448 2-98 (291)
281 PRK12938 acetyacetyl-CoA reduc 92.1 0.38 8.1E-06 46.7 6.6 30 353-384 3-32 (246)
282 PRK14180 bifunctional 5,10-met 92.1 0.3 6.5E-06 50.7 6.1 147 283-455 43-243 (282)
283 PRK07424 bifunctional sterol d 92.1 0.29 6.3E-06 53.1 6.3 38 353-392 178-217 (406)
284 PLN02657 3,8-divinyl protochlo 92.1 0.24 5.2E-06 53.0 5.6 43 346-390 53-97 (390)
285 PRK14184 bifunctional 5,10-met 92.1 0.3 6.6E-06 50.7 6.1 146 284-455 44-246 (286)
286 PF03435 Saccharop_dh: Sacchar 92.1 0.24 5.2E-06 52.5 5.6 85 356-443 1-98 (386)
287 PRK07041 short chain dehydroge 92.1 0.2 4.3E-06 48.2 4.5 40 357-398 1-42 (230)
288 PRK06701 short chain dehydroge 91.9 0.32 6.9E-06 49.4 6.1 43 353-397 46-91 (290)
289 PLN02520 bifunctional 3-dehydr 91.9 0.47 1E-05 53.2 7.9 44 352-398 378-423 (529)
290 PRK12935 acetoacetyl-CoA reduc 91.9 0.23 4.9E-06 48.3 4.8 43 353-397 6-51 (247)
291 PRK14166 bifunctional 5,10-met 91.9 0.33 7.1E-06 50.4 6.1 161 283-469 42-262 (282)
292 PRK09310 aroDE bifunctional 3- 91.8 0.45 9.8E-06 52.6 7.6 61 335-398 314-376 (477)
293 PRK06483 dihydromonapterin red 91.8 0.27 5.9E-06 47.6 5.2 35 353-389 2-38 (236)
294 TIGR03649 ergot_EASG ergot alk 91.7 0.15 3.2E-06 51.1 3.4 34 355-390 1-36 (285)
295 COG2085 Predicted dinucleotide 91.7 0.61 1.3E-05 46.5 7.5 150 357-525 4-176 (211)
296 TIGR00658 orni_carb_tr ornithi 91.7 1.9 4.1E-05 45.1 11.6 158 296-462 61-267 (304)
297 PRK06720 hypothetical protein; 91.7 0.29 6.4E-06 46.5 5.1 44 352-397 15-60 (169)
298 KOG1502 Flavonol reductase/cin 91.6 0.38 8.1E-06 50.9 6.3 39 352-392 5-45 (327)
299 PRK14169 bifunctional 5,10-met 91.6 0.32 7E-06 50.4 5.7 147 283-455 42-242 (282)
300 PRK08159 enoyl-(acyl carrier p 91.6 0.31 6.6E-06 49.1 5.5 46 353-398 10-60 (272)
301 PRK14176 bifunctional 5,10-met 91.5 0.43 9.4E-06 49.6 6.6 138 285-447 52-239 (287)
302 cd00401 AdoHcyase S-adenosyl-L 91.5 0.86 1.9E-05 49.7 9.1 101 332-444 180-290 (413)
303 PF02882 THF_DHG_CYH_C: Tetrah 91.5 0.4 8.6E-06 45.8 5.8 79 341-443 19-108 (160)
304 PRK14173 bifunctional 5,10-met 91.5 0.32 7E-06 50.5 5.7 139 283-447 41-230 (287)
305 PRK07984 enoyl-(acyl carrier p 91.5 0.3 6.6E-06 49.0 5.4 43 354-396 7-54 (262)
306 PRK08655 prephenate dehydrogen 91.4 0.48 1E-05 51.8 7.2 83 355-445 2-94 (437)
307 PRK06079 enoyl-(acyl carrier p 91.4 0.3 6.6E-06 48.3 5.1 44 353-397 7-52 (252)
308 PRK07856 short chain dehydroge 91.3 0.24 5.3E-06 48.5 4.3 35 353-389 6-42 (252)
309 PRK12859 3-ketoacyl-(acyl-carr 91.3 0.45 9.8E-06 47.0 6.2 32 353-384 6-37 (256)
310 PRK08415 enoyl-(acyl carrier p 91.3 0.33 7.3E-06 49.0 5.4 46 353-398 5-55 (274)
311 PRK07577 short chain dehydroge 91.2 0.23 5.1E-06 47.7 4.0 33 354-388 4-38 (234)
312 PRK06940 short chain dehydroge 91.2 0.44 9.5E-06 47.9 6.1 41 354-398 3-45 (275)
313 PRK08993 2-deoxy-D-gluconate 3 91.1 0.29 6.4E-06 48.1 4.7 32 351-384 8-39 (253)
314 COG1090 Predicted nucleoside-d 91.1 0.27 5.8E-06 51.0 4.4 64 356-428 1-71 (297)
315 PLN02545 3-hydroxybutyryl-CoA 91.0 0.44 9.6E-06 48.7 6.1 92 354-448 5-125 (295)
316 PRK12748 3-ketoacyl-(acyl-carr 91.0 0.49 1.1E-05 46.5 6.1 32 353-384 5-36 (256)
317 PRK08226 short chain dehydroge 91.0 0.4 8.6E-06 47.1 5.5 34 353-388 6-41 (263)
318 PRK14171 bifunctional 5,10-met 90.9 0.42 9.2E-06 49.7 5.8 146 284-455 45-245 (288)
319 PRK07533 enoyl-(acyl carrier p 90.8 0.42 9.2E-06 47.4 5.5 46 352-397 9-59 (258)
320 TIGR01830 3oxo_ACP_reduc 3-oxo 90.7 0.44 9.4E-06 45.7 5.4 40 356-397 1-43 (239)
321 PRK07417 arogenate dehydrogena 90.7 0.57 1.2E-05 47.7 6.5 85 355-448 2-96 (279)
322 PRK10792 bifunctional 5,10-met 90.7 0.66 1.4E-05 48.2 6.9 139 283-447 45-234 (285)
323 smart00859 Semialdhyde_dh Semi 90.7 0.74 1.6E-05 40.8 6.4 86 355-443 1-99 (122)
324 PRK14618 NAD(P)H-dependent gly 90.7 0.69 1.5E-05 48.0 7.2 92 354-448 5-110 (328)
325 PRK14188 bifunctional 5,10-met 90.7 0.32 7E-06 50.7 4.7 100 283-384 44-187 (296)
326 TIGR02622 CDP_4_6_dhtase CDP-g 90.5 0.46 1E-05 49.3 5.7 37 354-392 5-43 (349)
327 PRK15057 UDP-glucose 6-dehydro 90.5 0.63 1.4E-05 50.2 6.9 125 355-487 2-163 (388)
328 PRK06523 short chain dehydroge 90.5 0.31 6.6E-06 47.9 4.2 35 352-388 8-44 (260)
329 PF00056 Ldh_1_N: lactate/mala 90.4 0.72 1.6E-05 42.6 6.3 65 355-421 2-75 (141)
330 PRK14172 bifunctional 5,10-met 90.4 0.5 1.1E-05 48.9 5.8 146 285-456 46-244 (278)
331 PRK12824 acetoacetyl-CoA reduc 90.4 0.78 1.7E-05 44.2 6.8 29 354-384 3-31 (245)
332 cd05293 LDH_1 A subgroup of L- 90.3 0.24 5.2E-06 51.8 3.4 66 353-421 3-77 (312)
333 PRK01713 ornithine carbamoyltr 90.3 1.6 3.4E-05 46.4 9.5 163 296-461 68-277 (334)
334 PRK14186 bifunctional 5,10-met 90.3 0.49 1.1E-05 49.5 5.6 139 283-447 44-233 (297)
335 COG3268 Uncharacterized conser 90.2 0.3 6.5E-06 51.8 3.9 66 353-420 6-76 (382)
336 PLN02778 3,5-epimerase/4-reduc 90.2 0.43 9.3E-06 49.0 5.1 36 347-384 2-38 (298)
337 COG0111 SerA Phosphoglycerate 90.2 0.56 1.2E-05 49.5 6.0 83 353-444 142-234 (324)
338 PRK08324 short chain dehydroge 90.1 0.58 1.3E-05 53.7 6.6 45 353-399 422-468 (681)
339 PRK14183 bifunctional 5,10-met 90.1 0.58 1.3E-05 48.6 5.9 161 284-469 44-262 (281)
340 PRK00779 ornithine carbamoyltr 90.1 1.9 4.1E-05 45.1 9.8 162 295-462 64-268 (304)
341 cd08270 MDR4 Medium chain dehy 90.0 1.5 3.2E-05 43.7 8.7 88 352-444 132-223 (305)
342 PRK06398 aldose dehydrogenase; 90.0 0.34 7.4E-06 48.0 4.1 34 353-388 6-41 (258)
343 PRK06077 fabG 3-ketoacyl-(acyl 90.0 0.42 9E-06 46.4 4.6 30 353-384 6-35 (252)
344 PRK14177 bifunctional 5,10-met 89.9 0.53 1.1E-05 48.9 5.5 138 284-447 46-234 (284)
345 PRK11559 garR tartronate semia 89.9 0.52 1.1E-05 48.1 5.4 85 354-448 3-101 (296)
346 PLN02653 GDP-mannose 4,6-dehyd 89.8 0.62 1.3E-05 48.0 5.9 30 353-384 6-35 (340)
347 COG0499 SAM1 S-adenosylhomocys 89.7 0.88 1.9E-05 48.8 7.0 151 352-512 208-388 (420)
348 PLN02616 tetrahydrofolate dehy 89.7 0.51 1.1E-05 50.6 5.3 139 283-447 115-306 (364)
349 PRK14168 bifunctional 5,10-met 89.6 0.56 1.2E-05 49.0 5.4 139 283-447 45-240 (297)
350 TIGR03466 HpnA hopanoid-associ 89.6 0.26 5.7E-06 49.7 3.0 34 355-390 2-37 (328)
351 PRK14181 bifunctional 5,10-met 89.5 0.91 2E-05 47.3 6.9 138 284-447 39-232 (287)
352 PLN00015 protochlorophyllide r 89.5 0.65 1.4E-05 47.5 5.8 40 357-398 1-43 (308)
353 PRK06171 sorbitol-6-phosphate 89.5 0.37 8.1E-06 47.5 3.9 35 353-389 9-45 (266)
354 PLN02516 methylenetetrahydrofo 89.5 0.62 1.3E-05 48.8 5.6 138 284-447 52-242 (299)
355 PRK07574 formate dehydrogenase 89.4 0.61 1.3E-05 50.4 5.7 99 352-459 191-315 (385)
356 PRK13243 glyoxylate reductase; 89.3 0.71 1.5E-05 48.7 6.0 97 352-460 149-272 (333)
357 PLN02928 oxidoreductase family 89.2 0.89 1.9E-05 48.3 6.7 94 352-448 158-270 (347)
358 PLN02695 GDP-D-mannose-3',5'-e 89.1 0.45 9.8E-06 50.3 4.4 31 352-384 20-50 (370)
359 PRK10217 dTDP-glucose 4,6-dehy 89.0 0.46 9.9E-06 49.1 4.3 29 354-384 2-30 (355)
360 KOG0409 Predicted dehydrogenas 88.9 0.68 1.5E-05 48.6 5.4 121 330-462 15-157 (327)
361 COG0686 Ald Alanine dehydrogen 88.9 0.68 1.5E-05 48.9 5.3 103 353-461 168-293 (371)
362 TIGR02279 PaaC-3OHAcCoADH 3-hy 88.8 0.65 1.4E-05 51.8 5.6 92 354-448 6-126 (503)
363 PLN02897 tetrahydrofolate dehy 88.8 0.65 1.4E-05 49.5 5.3 82 340-447 196-289 (345)
364 TIGR02632 RhaD_aldol-ADH rhamn 88.8 0.65 1.4E-05 53.5 5.7 45 352-398 413-459 (676)
365 cd05311 NAD_bind_2_malic_enz N 88.7 0.94 2E-05 45.2 6.1 114 352-471 24-161 (226)
366 PRK08309 short chain dehydroge 88.6 0.63 1.4E-05 44.7 4.6 41 355-398 2-44 (177)
367 PRK12562 ornithine carbamoyltr 88.6 2.1 4.6E-05 45.4 9.0 164 296-462 67-278 (334)
368 PLN03154 putative allyl alcoho 88.5 1.8 3.8E-05 45.3 8.3 101 338-443 142-258 (348)
369 PRK10675 UDP-galactose-4-epime 88.5 0.65 1.4E-05 47.5 5.0 28 355-384 2-29 (338)
370 PRK02255 putrescine carbamoylt 88.5 4.9 0.00011 42.8 11.6 162 296-462 64-275 (338)
371 PRK08293 3-hydroxybutyryl-CoA 88.4 0.73 1.6E-05 47.1 5.3 40 354-396 4-45 (287)
372 TIGR01915 npdG NADPH-dependent 88.3 0.8 1.7E-05 45.0 5.3 40 355-396 2-43 (219)
373 PRK07066 3-hydroxybutyryl-CoA 88.3 1 2.3E-05 47.4 6.4 86 352-440 6-116 (321)
374 cd05191 NAD_bind_amino_acid_DH 88.3 1.3 2.9E-05 37.1 5.9 30 352-384 22-52 (86)
375 PLN00112 malate dehydrogenase 88.0 0.7 1.5E-05 50.9 5.1 66 353-421 100-182 (444)
376 PRK02102 ornithine carbamoyltr 87.9 6.5 0.00014 41.8 12.1 163 296-461 68-275 (331)
377 PLN02240 UDP-glucose 4-epimera 87.7 0.89 1.9E-05 46.8 5.4 29 354-384 6-34 (352)
378 TIGR00872 gnd_rel 6-phosphoglu 87.7 0.92 2E-05 46.8 5.5 102 355-463 2-121 (298)
379 PRK08261 fabG 3-ketoacyl-(acyl 87.6 0.97 2.1E-05 48.7 5.9 45 352-398 209-257 (450)
380 COG2084 MmsB 3-hydroxyisobutyr 87.6 0.48 1E-05 49.3 3.3 101 355-465 2-125 (286)
381 PF13561 adh_short_C2: Enoyl-( 87.5 0.72 1.5E-05 45.1 4.4 39 360-398 1-45 (241)
382 PRK14167 bifunctional 5,10-met 87.4 1 2.2E-05 47.2 5.5 138 284-447 44-236 (297)
383 PRK09496 trkA potassium transp 87.4 1.6 3.4E-05 47.0 7.2 39 355-396 2-42 (453)
384 TIGR03026 NDP-sugDHase nucleot 87.3 2.1 4.6E-05 46.1 8.2 110 355-467 2-160 (411)
385 COG3967 DltE Short-chain dehyd 87.1 1 2.3E-05 45.1 5.1 44 354-399 6-51 (245)
386 TIGR01181 dTDP_gluc_dehyt dTDP 87.1 1.1 2.4E-05 44.7 5.5 28 355-384 1-30 (317)
387 PRK06550 fabG 3-ketoacyl-(acyl 86.9 0.79 1.7E-05 44.1 4.3 30 353-384 5-34 (235)
388 PRK12367 short chain dehydroge 86.9 0.86 1.9E-05 45.5 4.6 33 353-387 14-48 (245)
389 cd05291 HicDH_like L-2-hydroxy 86.7 1.1 2.3E-05 46.5 5.4 64 355-421 2-74 (306)
390 COG1028 FabG Dehydrogenases wi 86.7 1.1 2.5E-05 43.5 5.3 45 352-398 4-52 (251)
391 PRK08220 2,3-dihydroxybenzoate 86.7 0.86 1.9E-05 44.3 4.4 31 352-384 7-37 (252)
392 COG0569 TrkA K+ transport syst 86.6 1.7 3.8E-05 43.2 6.6 36 354-392 1-38 (225)
393 PRK06035 3-hydroxyacyl-CoA deh 86.6 1.1 2.4E-05 45.8 5.3 39 354-395 4-44 (291)
394 cd08294 leukotriene_B4_DH_like 86.6 2.4 5.3E-05 42.8 7.8 55 339-395 128-186 (329)
395 TIGR01777 yfcH conserved hypot 86.4 0.55 1.2E-05 46.5 3.0 33 356-390 1-35 (292)
396 PRK12490 6-phosphogluconate de 86.4 2 4.3E-05 44.3 7.1 102 355-466 2-125 (299)
397 PF01370 Epimerase: NAD depend 86.3 1.1 2.5E-05 42.7 5.0 27 356-384 1-27 (236)
398 cd08292 ETR_like_2 2-enoyl thi 86.2 2.1 4.6E-05 43.0 7.1 86 352-443 139-238 (324)
399 cd05276 p53_inducible_oxidored 85.9 1.4 3.1E-05 43.3 5.6 42 352-395 139-182 (323)
400 PRK06130 3-hydroxybutyryl-CoA 85.8 1.3 2.8E-05 45.6 5.4 40 354-396 5-46 (311)
401 PRK08125 bifunctional UDP-gluc 85.8 2.5 5.4E-05 48.4 8.2 35 352-388 314-351 (660)
402 PRK12491 pyrroline-5-carboxyla 85.7 2.6 5.5E-05 43.2 7.4 84 354-448 3-103 (272)
403 PRK12480 D-lactate dehydrogena 85.7 2.3 5E-05 44.9 7.3 83 352-448 145-242 (330)
404 cd01338 MDH_choloroplast_like 85.7 0.69 1.5E-05 48.7 3.3 25 354-380 3-27 (322)
405 TIGR02437 FadB fatty oxidation 85.7 1.3 2.8E-05 51.5 5.8 42 350-394 310-353 (714)
406 TIGR01327 PGDH D-3-phosphoglyc 85.6 1.7 3.7E-05 48.7 6.6 100 352-460 137-261 (525)
407 cd00704 MDH Malate dehydrogena 85.6 0.91 2E-05 47.8 4.2 24 355-380 2-25 (323)
408 COG0604 Qor NADPH:quinone redu 85.6 1.7 3.6E-05 45.7 6.2 139 298-443 80-241 (326)
409 PRK14619 NAD(P)H-dependent gly 85.6 5.9 0.00013 40.9 10.1 28 354-384 5-32 (308)
410 TIGR01759 MalateDH-SF1 malate 85.6 0.97 2.1E-05 47.7 4.4 25 354-380 4-28 (323)
411 PRK05442 malate dehydrogenase; 85.5 0.73 1.6E-05 48.6 3.4 25 354-380 5-29 (326)
412 PRK11199 tyrA bifunctional cho 85.4 1 2.2E-05 48.2 4.6 38 347-386 92-129 (374)
413 PRK07502 cyclohexadienyl dehyd 85.3 3 6.4E-05 43.0 7.8 86 354-447 7-104 (307)
414 cd08289 MDR_yhfp_like Yhfp put 85.1 2.1 4.5E-05 43.2 6.4 101 340-443 129-243 (326)
415 PLN02858 fructose-bisphosphate 85.1 1.3 2.9E-05 55.0 5.9 182 275-466 233-451 (1378)
416 PRK10669 putative cation:proto 85.0 2 4.3E-05 48.2 6.8 41 353-396 417-459 (558)
417 PRK09424 pntA NAD(P) transhydr 85.0 2.9 6.4E-05 46.8 8.0 91 352-447 164-288 (509)
418 PLN02996 fatty acyl-CoA reduct 85.0 1.1 2.3E-05 49.8 4.6 25 352-378 10-34 (491)
419 KOG3011 Ubiquitin-conjugating 85.0 0.84 1.8E-05 46.4 3.4 134 18-161 109-260 (293)
420 PRK15469 ghrA bifunctional gly 84.9 0.85 1.8E-05 47.8 3.6 95 353-459 136-257 (312)
421 PLN02527 aspartate carbamoyltr 84.9 9.4 0.0002 40.0 11.3 159 296-460 61-267 (306)
422 PRK00257 erythronate-4-phospha 84.8 3.4 7.3E-05 44.7 8.1 80 352-444 115-208 (381)
423 cd01079 NAD_bind_m-THF_DH NAD 84.8 1.9 4.1E-05 42.6 5.7 86 350-443 59-156 (197)
424 cd08243 quinone_oxidoreductase 84.7 3 6.4E-05 41.5 7.2 100 340-443 128-238 (320)
425 COG0039 Mdh Malate/lactate deh 84.6 1.1 2.4E-05 47.1 4.3 64 354-421 1-75 (313)
426 KOG4169 15-hydroxyprostaglandi 84.3 1.8 3.9E-05 44.1 5.3 75 353-429 5-97 (261)
427 KOG1210 Predicted 3-ketosphing 84.1 0.99 2.1E-05 47.6 3.6 60 342-403 22-83 (331)
428 PLN00016 RNA-binding protein; 83.9 1 2.3E-05 47.5 3.8 38 350-389 49-92 (378)
429 cd05292 LDH_2 A subgroup of L- 83.9 2.3 4.9E-05 44.3 6.2 63 355-421 2-73 (308)
430 TIGR02441 fa_ox_alpha_mit fatt 83.7 1.1 2.5E-05 52.1 4.3 39 352-393 334-374 (737)
431 PRK11880 pyrroline-5-carboxyla 83.7 2.1 4.6E-05 42.8 5.7 40 355-397 4-48 (267)
432 PRK15438 erythronate-4-phospha 83.6 3.6 7.8E-05 44.5 7.7 84 352-448 115-215 (378)
433 PRK11064 wecC UDP-N-acetyl-D-m 83.4 5.3 0.00011 43.4 9.0 90 354-448 4-124 (415)
434 smart00822 PKS_KR This enzymat 83.3 1.3 2.8E-05 39.5 3.6 33 354-388 1-36 (180)
435 PRK06223 malate dehydrogenase; 83.3 2.5 5.5E-05 43.5 6.2 65 354-421 3-76 (307)
436 cd08295 double_bond_reductase_ 83.2 3.1 6.6E-05 42.8 6.8 99 340-443 137-251 (338)
437 PRK04284 ornithine carbamoyltr 83.1 14 0.00031 39.2 11.8 167 289-462 63-277 (332)
438 PRK11730 fadB multifunctional 82.9 1.8 3.8E-05 50.4 5.4 38 352-392 312-351 (715)
439 PRK11891 aspartate carbamoyltr 82.7 6 0.00013 43.5 9.1 166 289-461 144-357 (429)
440 cd08250 Mgc45594_like Mgc45594 82.6 4.3 9.4E-05 41.0 7.6 99 340-444 125-238 (329)
441 PLN02342 ornithine carbamoyltr 82.5 19 0.00042 38.6 12.6 162 296-462 107-310 (348)
442 PF01073 3Beta_HSD: 3-beta hyd 82.4 1.5 3.2E-05 44.9 4.1 26 357-384 1-28 (280)
443 cd00650 LDH_MDH_like NAD-depen 82.3 1.6 3.5E-05 44.1 4.2 64 356-421 1-76 (263)
444 KOG1371 UDP-glucose 4-epimeras 82.2 2.8 6E-05 44.5 6.0 30 353-384 2-31 (343)
445 PLN02306 hydroxypyruvate reduc 82.2 3 6.5E-05 45.1 6.5 94 352-448 164-280 (386)
446 PLN02602 lactate dehydrogenase 82.1 1.3 2.9E-05 47.1 3.7 64 354-421 38-111 (350)
447 KOG2380 Prephenate dehydrogena 82.0 1.1 2.3E-05 47.9 2.9 140 321-466 17-173 (480)
448 cd05294 LDH-like_MDH_nadp A la 81.8 1.7 3.7E-05 45.3 4.4 28 355-384 2-31 (309)
449 cd05282 ETR_like 2-enoyl thioe 81.8 3.3 7.2E-05 41.5 6.3 86 352-443 138-237 (323)
450 PRK00856 pyrB aspartate carbam 81.6 9.3 0.0002 40.1 9.7 156 289-463 63-266 (305)
451 PRK09599 6-phosphogluconate de 81.5 4.8 0.0001 41.4 7.5 102 355-466 2-125 (301)
452 TIGR01179 galE UDP-glucose-4-e 81.5 1.5 3.2E-05 44.0 3.6 28 355-384 1-28 (328)
453 PF02254 TrkA_N: TrkA-N domain 81.4 3 6.4E-05 36.1 5.1 39 356-397 1-41 (116)
454 PRK06436 glycerate dehydrogena 81.2 3 6.5E-05 43.6 5.9 80 352-444 121-210 (303)
455 PLN02206 UDP-glucuronate decar 81.2 1.7 3.8E-05 47.5 4.3 30 353-384 119-148 (442)
456 COG1484 DnaC DNA replication p 81.0 3.5 7.7E-05 41.9 6.2 75 343-424 96-176 (254)
457 cd01339 LDH-like_MDH L-lactate 81.0 2.7 5.9E-05 43.3 5.5 62 356-421 1-72 (300)
458 PRK15409 bifunctional glyoxyla 80.9 3.2 7E-05 43.7 6.0 99 351-459 143-267 (323)
459 PRK14106 murD UDP-N-acetylmura 80.9 3.9 8.5E-05 44.1 6.9 29 353-384 5-33 (450)
460 PRK07201 short chain dehydroge 80.9 4 8.7E-05 46.0 7.2 28 355-384 2-31 (657)
461 PRK06300 enoyl-(acyl carrier p 80.8 2.7 5.8E-05 43.6 5.3 33 352-384 7-39 (299)
462 PLN02350 phosphogluconate dehy 80.8 2 4.3E-05 48.0 4.6 110 352-466 5-138 (493)
463 TIGR02440 FadJ fatty oxidation 80.7 2.3 5.1E-05 49.3 5.4 39 351-392 302-343 (699)
464 PRK11908 NAD-dependent epimera 80.7 2.2 4.8E-05 44.2 4.7 36 354-391 2-40 (347)
465 COG1250 FadB 3-hydroxyacyl-CoA 80.7 1 2.2E-05 47.3 2.2 36 353-391 3-40 (307)
466 cd08259 Zn_ADH5 Alcohol dehydr 80.6 4.4 9.5E-05 40.7 6.7 42 352-395 162-205 (332)
467 TIGR01757 Malate-DH_plant mala 80.6 2.6 5.5E-05 45.7 5.2 65 354-421 45-126 (387)
468 TIGR01692 HIBADH 3-hydroxyisob 80.6 2.2 4.8E-05 43.6 4.6 91 366-464 6-119 (288)
469 KOG1203 Predicted dehydrogenas 80.5 2.2 4.7E-05 46.6 4.7 62 332-395 57-121 (411)
470 PRK03562 glutathione-regulated 80.5 3.6 7.7E-05 47.1 6.6 46 348-396 395-442 (621)
471 COG0287 TyrA Prephenate dehydr 80.4 3.1 6.7E-05 43.1 5.6 29 353-384 3-31 (279)
472 PTZ00117 malate dehydrogenase; 80.4 3.6 7.7E-05 43.1 6.1 67 352-421 4-79 (319)
473 PRK13581 D-3-phosphoglycerate 80.3 3.5 7.7E-05 46.2 6.5 83 352-444 139-231 (526)
474 cd08293 PTGR2 Prostaglandin re 80.3 4.8 0.0001 41.2 7.0 85 354-443 156-254 (345)
475 cd05280 MDR_yhdh_yhfp Yhdh and 80.1 4.4 9.5E-05 40.7 6.5 43 353-398 147-191 (325)
476 cd05211 NAD_bind_Glu_Leu_Phe_V 80.1 3.8 8.3E-05 40.8 6.0 30 352-384 22-51 (217)
477 cd05290 LDH_3 A subgroup of L- 80.1 2.8 6.1E-05 43.8 5.2 64 355-421 1-74 (307)
478 PRK06476 pyrroline-5-carboxyla 80.0 2.5 5.4E-05 42.4 4.7 82 355-444 2-94 (258)
479 KOG1200 Mitochondrial/plastidi 80.0 3.1 6.6E-05 41.6 5.1 45 353-399 14-60 (256)
480 PLN02166 dTDP-glucose 4,6-dehy 80.0 2.1 4.6E-05 46.7 4.5 31 352-384 119-149 (436)
481 cd00300 LDH_like L-lactate deh 79.9 2.4 5.1E-05 44.0 4.6 63 356-421 1-72 (300)
482 PLN02572 UDP-sulfoquinovose sy 79.7 1.9 4.1E-05 47.1 4.0 30 353-384 47-76 (442)
483 PRK08664 aspartate-semialdehyd 79.7 3 6.4E-05 44.2 5.3 29 354-384 4-33 (349)
484 PRK07680 late competence prote 79.7 3.6 7.8E-05 41.7 5.7 85 355-448 2-102 (273)
485 cd05288 PGDH Prostaglandin deh 79.6 4.8 0.0001 40.6 6.6 88 353-445 146-246 (329)
486 PRK08192 aspartate carbamoyltr 79.4 6.8 0.00015 41.7 7.9 162 296-461 66-276 (338)
487 PRK09009 C factor cell-cell si 79.4 2.2 4.8E-05 41.1 3.9 28 355-384 2-31 (235)
488 PRK06932 glycerate dehydrogena 79.4 2.9 6.2E-05 43.8 5.0 94 352-459 146-264 (314)
489 PRK11150 rfaD ADP-L-glycero-D- 79.4 1.8 3.8E-05 43.9 3.4 27 356-384 2-28 (308)
490 COG1052 LdhA Lactate dehydroge 79.3 3.7 7.9E-05 43.5 5.8 86 353-448 146-244 (324)
491 PRK08605 D-lactate dehydrogena 79.1 4.4 9.4E-05 42.7 6.3 81 352-444 145-237 (332)
492 PRK00094 gpsA NAD(P)H-dependen 78.7 5 0.00011 41.0 6.5 91 355-448 3-111 (325)
493 PRK14805 ornithine carbamoyltr 78.7 11 0.00024 39.5 9.0 162 296-461 60-263 (302)
494 TIGR01214 rmlD dTDP-4-dehydror 78.5 2.1 4.6E-05 42.5 3.7 28 355-384 1-28 (287)
495 PTZ00082 L-lactate dehydrogena 78.3 5.1 0.00011 42.1 6.5 64 354-421 7-80 (321)
496 PLN02477 glutamate dehydrogena 78.3 9 0.0002 41.9 8.5 29 352-383 205-233 (410)
497 cd03514 CrtR_beta-carotene-hyd 78.1 20 0.00044 35.2 10.3 22 129-150 167-188 (207)
498 PRK05808 3-hydroxybutyryl-CoA 78.0 2.2 4.9E-05 43.3 3.7 36 354-392 4-41 (282)
499 PLN02712 arogenate dehydrogena 77.9 3.8 8.2E-05 47.4 5.8 103 353-466 52-173 (667)
500 PRK06129 3-hydroxyacyl-CoA deh 77.8 3.4 7.5E-05 42.7 5.0 37 355-394 4-42 (308)
No 1
>PLN02869 fatty aldehyde decarbonylase
Probab=100.00 E-value=2.4e-168 Score=1350.57 Aligned_cols=506 Identities=71% Similarity=1.253 Sum_probs=488.0
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhcccCCCCCCCCcccccccCcHHHHHHHHHHHHH
Q 009674 3 IPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIP 82 (529)
Q Consensus 3 ~~p~~~~lP~W~~~g~i~~lll~llv~Df~~Yw~HRllH~~~Ly~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l~~iP 82 (529)
++|+++++|.|+++|+++.+++|+++.|++|||+||++|++++||++|++||++.+|+|+++.++++.|.+.+.+++.+|
T Consensus 112 ~~p~~~~~P~W~~~g~l~~~Llhv~~~Df~fYW~HRllH~~~LYwr~HkvHHss~~~~P~Ts~~HP~~E~L~y~ll~~IP 191 (620)
T PLN02869 112 ILPGASHMPLWRTDGVLITILLHMGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFLLFAIP 191 (620)
T ss_pred hhhhhhcCcccccchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCCCCCchhhhcCcHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999866667888888888899
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHhcccceeecccccccccCcchhcccChhhhhhhhcCCCCCccCCcchhhhhcC
Q 009674 83 LVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYG 162 (529)
Q Consensus 83 ll~~~~lg~~si~~v~~y~i~~~~~~~l~Hsn~e~~P~~~f~~lp~L~yli~tP~~H~lHH~~~~~NYG~~~~lWDrLFG 162 (529)
+++..+++..++.++++|+++.++.++++|||+|++|+++++.+|+++|+++||++|++||+++++|||.+|++||++||
T Consensus 192 Lllli~~g~~hi~t~~~yli~~~f~~~~gHSN~El~P~~~~~~~ppLkyll~TPsfHdlHHs~fd~NYGlfF~~WDrLFG 271 (620)
T PLN02869 192 LLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSIFPPLKYLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYG 271 (620)
T ss_pred HHHHhhcccchHHHHHHHHHHHHHHhcccccCccccccchhccCCcchheecCchHHhHHhccCCcCcccchHHHHhccC
Confidence 99887777778899999999999999999999999999888888999999999999999999999999999999999999
Q ss_pred CCCCCCchHHHHhhhcCCccccccCCCCceeeecccCCccccccccchhhhhccCCccccccCcchhhcchhhHHHHHHH
Q 009674 163 TIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSV 242 (529)
Q Consensus 163 T~~~~~~~~~~~~~~~~~~~~~~~~~~pd~V~l~H~~~~~s~~h~~~~~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~~ 242 (529)
|+++++++++++... +.++ +||||||||+||++|+||+||||||+||+||+ ++||||||||+|+++|+
T Consensus 272 T~d~~s~~l~e~~~~--~~~~-----~pd~V~l~H~t~~~s~~h~~~~~~s~as~p~~-----~~~~l~~~wp~~~~~m~ 339 (620)
T PLN02869 272 TMDKSSDTLYEKSLK--RPEE-----IPDVVHLTHLTTPDSIYHLRLGFASLASKPYI-----SKWYLRLMWPVTSWSMM 339 (620)
T ss_pred CCCCCchhHHHHhhc--Cccc-----CCCEEEEeccCCHHHhhccchHHHHhccCCcc-----chhHHHHHHHHHHHHHH
Confidence 999999999999988 4343 99999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhcceEEEeecccCcccceeEEeeccCcccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCcee
Q 009674 243 LVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIY 322 (529)
Q Consensus 243 ~~~~~~~~~f~~~~~~~~~~~~~~w~~pr~~~~y~~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~ 322 (529)
++ |+|||||++|+|+|||+++|||+||||||||++|+++|+||++||+||++|||+|+||+|||+|||+|+|||+|++|
T Consensus 340 ~~-w~~~~~f~~~~~~~~~~~~~tw~vpr~~~qy~~~~~~~~in~~Ie~ail~ad~~Gvkv~sLg~LNk~~~LN~~G~l~ 418 (620)
T PLN02869 340 LT-WIYGRTFVLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIEEAILEADKRGVKVLSLGLLNQGEELNRYGELY 418 (620)
T ss_pred HH-HHhCCceEeeeeeccceeeeEEEeccccccccCchhhhhHHHHHHHHHHHHHhcCCEEEechhcchhhhhcCCceEe
Confidence 99 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCcc-cc
Q 009674 323 LERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPV-EA 401 (529)
Q Consensus 323 ~~k~p~~L~irvv~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~-~~ 401 (529)
|+|||+ ||||||||||||||||+|+||++++|||++|||+ |||||||.+|||||||++..++|||++||+|++. ++
T Consensus 419 v~k~p~-L~vrvv~G~tLtaAvvln~ip~~~~~vfl~G~~s--K~~raia~~lc~r~i~~~t~~~~~~~~~~~~~~~~~~ 495 (620)
T PLN02869 419 IHRNPK-LKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNLS--KVAYFIASALCQRGIQVATFREDEYEKLNKKLPNTEC 495 (620)
T ss_pred eecCCC-cceEEEeCCchHHHHHHHhcCCCCceEEEecCcc--HHHHHHHHHHHhcCCeEeecCHHHHHHHHHhccchhh
Confidence 999999 9999999999999999999999999999999996 9999999999999999655899999999999888 89
Q ss_pred ccceeeecccccCcceEEEEcCcCChhhhhcCCCCceeecccccCccCCCCCceeecCCccccCCCCccccccccccCcc
Q 009674 402 QHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRR 481 (529)
Q Consensus 402 ~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r 481 (529)
|+||+++|++ +||+|||||+++++||+||||||+||||||+|+++.||||+|.++|||++|+++||++|||||||||
T Consensus 496 ~~~l~~~~~~---~~k~w~vg~~~~~~eq~~A~~gt~f~~~~~~p~~~~R~dC~Y~~~pam~~p~~~~~~~sce~~l~r~ 572 (620)
T PLN02869 496 GSKLLLSKNY---SEKIWLVGDGLTEEEQKKASKGTLFIPFSQFPPKRLRKDCFYHTTPAMMSPKSFENVDSCENWLPRR 572 (620)
T ss_pred hhhEEEeecc---CceeEEecCCCCHHHHhhCCCCCeecccccCCchhhhccccccCCccccCChhhcccchhhccccch
Confidence 9999999998 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhHhhhhcCCCCCccchh-hhhHHHHHHHHHhcCCccCCCC
Q 009674 482 VMSAWRIAGIIHALEGWDLNECGQT-MCDIHQVWHASLRHGFRPLFPV 528 (529)
Q Consensus 482 ~~~Ac~a~~~v~alEgw~~~e~G~i-v~~id~i~~aa~kHGF~p~~~~ 528 (529)
+|+||||||||||||||++|||| | |++||++|+||+||||+|+...
T Consensus 573 v~~a~~~~givh~legw~~he~g-~~v~~id~~W~aal~hgf~p~~~~ 619 (620)
T PLN02869 573 AMSAWRVAGILHALEGWNVHECG-YTMFDIEKIWEASLQHGFRPLLIP 619 (620)
T ss_pred hhhHhhhcceeeeecCccccccc-cccccHHHHHHHHHHcCCccCCCC
Confidence 99999999999999999999999 8 9999999999999999998754
No 2
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=100.00 E-value=3.2e-67 Score=484.54 Aligned_cols=164 Identities=61% Similarity=1.106 Sum_probs=160.0
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecccccCcceEEEEcCcCChhhhhcCCC
Q 009674 356 VLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPK 435 (529)
Q Consensus 356 V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~a~~ 435 (529)
|||+|+++ |||||||.+||||||||+|.++|+|++||++++.++++||++++++ ++|+|||||+||++||++|||
T Consensus 1 V~L~G~~s--KvaraiA~~LC~rgv~V~m~~~~~y~~lk~~~~~~~~~~Lv~~~~~---~~K~WlVGd~l~~~EQ~~Ap~ 75 (164)
T PF12076_consen 1 VFLTGNTS--KVARAIALALCRRGVQVVMLSKERYESLKSEAPEECQSNLVQSTSY---QAKTWLVGDGLTEEEQKWAPK 75 (164)
T ss_pred Ceeccccc--HHHHHHHHHHHhcCCEEEEecHHHHHHHHHHcCHHhhccEEeecCC---CceeEEeCCCCCHHHHhcCCC
Confidence 79999995 9999999999999999999999999999999999999999999998 679999999999999999999
Q ss_pred CceeecccccCccCCCCCceeecCCccccCCCCccccccccccCcchhHHHHHhhHhhhhcCCCCCccchhhhhHHHHHH
Q 009674 436 GTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWH 515 (529)
Q Consensus 436 G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r~~~Ac~a~~~v~alEgw~~~e~G~iv~~id~i~~ 515 (529)
||+|||||||||+++||||+|+++|||++|++++|+||||||||||+|+||||||||||||||++||||.-|++||++|+
T Consensus 76 Gt~FipfsqfP~~~~RkDC~Y~~tPAM~~P~~~~nl~sCEnwlpRrVmsAwr~aGivHaLEgW~~HEcG~~v~~idkvW~ 155 (164)
T PF12076_consen 76 GTHFIPFSQFPPKKVRKDCTYHSTPAMKVPKSMENLHSCENWLPRRVMSAWRAAGIVHALEGWNHHECGDDVDRIDKVWE 155 (164)
T ss_pred CCEEeeccCCCcHHHhCCCcccCcccccCChhhhhhhhhhccchhhHHHHHhhhhhhhhhcCCcccccCcccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999933999999999
Q ss_pred HHHhcCCcc
Q 009674 516 ASLRHGFRP 524 (529)
Q Consensus 516 aa~kHGF~p 524 (529)
||++|||+|
T Consensus 156 AAl~HGF~P 164 (164)
T PF12076_consen 156 AALKHGFRP 164 (164)
T ss_pred HHHHcCCCC
Confidence 999999998
No 3
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=100.00 E-value=7.8e-39 Score=317.34 Aligned_cols=234 Identities=21% Similarity=0.242 Sum_probs=189.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccC-CceeeecCCCCcc-eeeecCChhHHHHHHhcCcC----
Q 009674 278 LPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRN-GEIYLERQPNKLK-IKVVDGSSLAAAVVVNSLPK---- 351 (529)
Q Consensus 278 ~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~-g~~~~~k~p~~L~-irvv~Gnsltaavv~~~i~~---- 351 (529)
+-++.|++.|.+.+|++.|+|.|++|++||+|+| +.++ |...+.|+|. +. +|+|||||+||+++|+++.+
T Consensus 85 ~~s~pkaatrrvl~a~~~a~~~Ga~V~gLGgFss---IVgn~~~n~q~~~~e-~t~~~~ttgns~Tayaa~r~Vl~~~~~ 160 (351)
T COG5322 85 LRSRPKAATRRVLNAMALAQKLGADVTGLGGFSS---IVGNLGQNVQVRNVE-LTFTRFTTGNSHTAYAACRQVLKHFAQ 160 (351)
T ss_pred HhhCHHHHHHHHHHHHHHHHHcCCeEEeecchhh---hhccccccccccceE-EEEEecccCCccchHHHHHHHHHHHHH
Confidence 3456899999999999999999999999999999 5553 3355679999 98 99999999999999999977
Q ss_pred -----CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEe------cchhhHHHHHhhCccccccceeeeccccc--Ccce
Q 009674 352 -----TTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT------ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTK 417 (529)
Q Consensus 352 -----~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~l------~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~ 417 (529)
..++|.+||||| +||++||+||+ +-++++++ +++++++.||++++.+. +-+++++. .+..
T Consensus 161 lGidlsqatvaivGa~G--~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~----i~s~d~~~~~e~i~ 234 (351)
T COG5322 161 LGIDLSQATVAIVGATG--DIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGK----IMSLDYALPQEDIL 234 (351)
T ss_pred hCcCHHHCeEEEecCCc--hHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCe----eeeccccccccceE
Confidence 488999999999 99999999999 88888887 67778888888888777 22335554 4557
Q ss_pred EEEE----cCcCChhhhhcCCCCceeecccc---cCcc-CCCCCceeecCCccccCCC--CccccccccccCcchhHHHH
Q 009674 418 IWLV----GDDLTGKEQARAPKGTIFIPYTQ---IPPR-KLRKDCFYHSTPAMIIPPS--LSNMHSCENWLGRRVMSAWR 487 (529)
Q Consensus 418 vwiv----g~~~~~~~q~~a~~G~~f~~~~~---~~~~-~~R~dc~y~~~~a~~~P~~--~~~~~~~e~~~p~r~~~Ac~ 487 (529)
+|++ |-.|.|+.+ +||...+|=.. +++. +-|.|+..++++.+.-|.+ |..+...+| |.|+++||.
T Consensus 235 v~vAs~~~g~~I~pq~l---kpg~~ivD~g~P~dvd~~vk~~~~V~Ii~GGlV~~s~~it~gi~~~~~~--p~~~l~aCl 309 (351)
T COG5322 235 VWVASMPKGVEIFPQHL---KPGCLIVDGGYPKDVDTSVKNVGGVRIIPGGLVEHSLDITWGIMKIVGM--PVRQLFACL 309 (351)
T ss_pred EEEeecCCCceechhhc---cCCeEEEcCCcCcccccccccCCCeEEecCccccCccccchhHHHHccc--chhhHHHHH
Confidence 7995 444555555 66666666552 3333 4445666777777766665 666665555 999999999
Q ss_pred HhhHhhhhcCCCCC-ccch-h-hhhHHHHHHHHHhcCCccCC
Q 009674 488 IAGIIHALEGWDLN-ECGQ-T-MCDIHQVWHASLRHGFRPLF 526 (529)
Q Consensus 488 a~~~v~alEgw~~~-e~G~-i-v~~id~i~~aa~kHGF~p~~ 526 (529)
||+||+++|||++| +||| | +|||++|.++|.||||+|+.
T Consensus 310 AEtlil~~eg~~~~fS~Grq~~~dk~~~ig~~aekhGF~p~~ 351 (351)
T COG5322 310 AETLILEFEGEHTNFSWGRQILVDKMEFIGDAAEKHGFKPLD 351 (351)
T ss_pred HHHHHHHhcchhhhccccccccHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999 5999 8 99999999999999999964
No 4
>PRK14982 acyl-ACP reductase; Provisional
Probab=100.00 E-value=3.1e-38 Score=327.63 Aligned_cols=263 Identities=15% Similarity=0.195 Sum_probs=205.8
Q ss_pred HhcceEEEeecccCcc---cceeEEe--eccCcccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCce
Q 009674 247 IYGRTFVSESNTLDKL---KLQTWVV--PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEI 321 (529)
Q Consensus 247 ~~~~~f~~~~~~~~~~---~~~~w~~--pr~~~~y~~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~ 321 (529)
....+|++++-.++-- ..+-|.| |-.+=|- ...+.|.+.|+|++|+..|+|.|++|++||++++ +.+++ .
T Consensus 35 ~~~~p~~~~~~~v~S~~g~~~eg~~i~~~~~pe~l-~~~~~~~~~~~~~~a~~~a~~~G~~i~~Lg~~ts---iv~~~-~ 109 (340)
T PRK14982 35 CSAPPQLVDHIEVTSATGQTIEGKYIESCFLPEML-SNRRFKTARRKVLNAMALAQKKGINITALGGFSS---IIFEN-F 109 (340)
T ss_pred hhCCCeEeeeEEEEeCCCCEEEEEEEeCCCCHHHH-hccChHHHHHHHHHHHHHHHHCCCeEEEcCChHH---HhcCC-c
Confidence 4346899999888544 4477876 3333233 4446666767799999999999999999999999 66555 3
Q ss_pred eeecCCC--Ccce---eeecCChhHHHHHHhcCcC---------CCcEEEEecccCchhhHHHHHHHHhc-cCc-EEEe-
Q 009674 322 YLERQPN--KLKI---KVVDGSSLAAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQ-MGI-KVAT- 384 (529)
Q Consensus 322 ~~~k~p~--~L~i---rvv~Gnsltaavv~~~i~~---------~~~~V~~~Gatg~~kig~ava~~L~~-~~~-~v~l- 384 (529)
.+.++.+ .+++ +|||||||||++.+++++. ..++|+|+||+| +||+.+|+.|++ .|+ ++++
T Consensus 110 ~~~~~~~~r~i~ie~~~~TtGNs~T~~ll~~~V~la~~~lg~~l~~k~VLVtGAtG--~IGs~lar~L~~~~gv~~lilv 187 (340)
T PRK14982 110 NLLQHKQVRNTTLEWERFTTGNTHTAYVICRQVEQNAPRLGIDLSKATVAVVGATG--DIGSAVCRWLDAKTGVAELLLV 187 (340)
T ss_pred ccccccccccceeccccccCCchhHHHHHHHHHHHhHHHhccCcCCCEEEEEccCh--HHHHHHHHHHHhhCCCCEEEEE
Confidence 3332211 1445 8999999999999998875 368999999999 999999999984 454 6666
Q ss_pred -cchhhHHHHHhhCccccccceeeeccccc--CcceE--EEEcC----cCChhhhhcCCCCceeecccccCcc----CCC
Q 009674 385 -ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKI--WLVGD----DLTGKEQARAPKGTIFIPYTQIPPR----KLR 451 (529)
Q Consensus 385 -~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~v--wivg~----~~~~~~q~~a~~G~~f~~~~~~~~~----~~R 451 (529)
|++++++.+++++..+. +.++.+ +.+++ ++.+. .+++++. ++|.++||.+ +|+. .-|
T Consensus 188 ~R~~~rl~~La~el~~~~------i~~l~~~l~~aDiVv~~ts~~~~~~I~~~~l---~~~~~viDiA-vPRDVd~~v~~ 257 (340)
T PRK14982 188 ARQQERLQELQAELGGGK------ILSLEEALPEADIVVWVASMPKGVEIDPETL---KKPCLMIDGG-YPKNLDTKVQG 257 (340)
T ss_pred cCCHHHHHHHHHHhcccc------HHhHHHHHccCCEEEECCcCCcCCcCCHHHh---CCCeEEEEec-CCCCCCcccCC
Confidence 88899999998865332 233432 44444 44443 4888877 8999999999 5554 445
Q ss_pred CCceeecCCccccCCCCc-cc-cccccccCcchhHHHHHhhHhhhhcCCCCC-ccch--h-hhhHHHHHHHHHhcCCccC
Q 009674 452 KDCFYHSTPAMIIPPSLS-NM-HSCENWLGRRVMSAWRIAGIIHALEGWDLN-ECGQ--T-MCDIHQVWHASLRHGFRPL 525 (529)
Q Consensus 452 ~dc~y~~~~a~~~P~~~~-~~-~~~e~~~p~r~~~Ac~a~~~v~alEgw~~~-e~G~--i-v~~id~i~~aa~kHGF~p~ 525 (529)
+|+++.+++.+++|.+++ ++ ...|+++|+|+++||+||+||++||||++| ++|| | ++||++|.++|+||||+|+
T Consensus 258 ~~V~v~~gG~V~~p~~vd~~l~~~v~~~~~~r~~~Ac~AEtiiL~leg~~~~fS~Gr~~i~~~~v~~i~~~a~kHGf~~~ 337 (340)
T PRK14982 258 PGIHVLKGGIVEHSLDIDWKIMEIAEMDNPQRQMFACFAEAMLLEFEGCHTNFSWGRNQITLEKMEFIGEASVKHGFSPL 337 (340)
T ss_pred CCEEEEeCCccccCCCcCccHHHHHhccchhhHHHHHHHHHHHHHhcCCccCCCcCccccCHHHHHHHHHHHHHcCCccc
Confidence 999999999999999977 33 346799999999999999999999999999 5997 8 9999999999999999996
Q ss_pred C
Q 009674 526 F 526 (529)
Q Consensus 526 ~ 526 (529)
-
T Consensus 338 ~ 338 (340)
T PRK14982 338 L 338 (340)
T ss_pred c
Confidence 4
No 5
>COG3000 ERG3 Sterol desaturase [Lipid metabolism]
Probab=99.94 E-value=8.5e-27 Score=235.73 Aligned_cols=151 Identities=27% Similarity=0.437 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhcccCCCCCCCCcccccccCcHHHHHHHHHHHHHHHHHHHhhhhhHHHH
Q 009674 18 VILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASF 97 (529)
Q Consensus 18 ~i~~lll~llv~Df~~Yw~HRllH~~~Ly~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~~lg~~si~~v 97 (529)
+++++++.+++.|+++||.||+.|+.++||++|+.||++.+++++|+.+.||+|.++......+|+.++. .++.++
T Consensus 95 ~~l~~~~~~~~~D~~~Y~~HR~~H~~~~~w~~H~~HH~~~~~~~~t~~~~hp~e~ll~~~~~~~~~~l~~----~~~~~~ 170 (271)
T COG3000 95 FALQLLLAFLFLDLGYYWAHRLLHRVPLLWAFHKVHHSSEVPDPLTALRFHPLEILLLAFLGLLPLLLLG----LSPVAV 170 (271)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCcccCCchhhhhcChHHHHHHHHHHHHHHHHhc----CCHHHH
Confidence 5677888899999999999999999999999999999999999999999999999999877667766542 466777
Q ss_pred HHHHHHHHHHHHhcccceeecccccccccCcchhcccChhhhhhhhcCC--CCCccCCcchhhhhcCCCCCCCchHHHHh
Q 009674 98 VGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQF--RTNYSLFMPIYDYIYGTIDRSSDSVYEKS 175 (529)
Q Consensus 98 ~~y~i~~~~~~~l~Hsn~e~~P~~~f~~lp~L~yli~tP~~H~lHH~~~--~~NYG~~~~lWDrLFGT~~~~~~~~~~~~ 175 (529)
..+.++..+...++|||++. | +. .+++++++.+|++|++||+++ ++|||.++++|||+|||+.++.++..+++
T Consensus 171 ~~~~~~~~~~~~~~H~~~~~-~-~~---~~~~~~v~~~p~~H~lHH~~~~~~~Nyg~~~~~WDrlFGT~~~~~~~~~~~~ 245 (271)
T COG3000 171 ALLFIFLLFWAVLIHSNLDL-P-LP---LGWLRYVFNTPRHHRLHHSKDPYDKNYGVTLTFWDRLFGTYHPPDEREPDKI 245 (271)
T ss_pred HHHHHHHHHHHHHHhcCccc-c-CC---cccceeeecCchHHHHhccCCCCCCcchhhhHHHHHHcccCCCCcccCcccc
Confidence 77777788899999999986 3 22 356677889999999999997 49999999999999999999988877775
Q ss_pred hh
Q 009674 176 LK 177 (529)
Q Consensus 176 ~~ 177 (529)
..
T Consensus 246 ~~ 247 (271)
T COG3000 246 GV 247 (271)
T ss_pred cc
Confidence 54
No 6
>KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism]
Probab=99.89 E-value=2.6e-23 Score=208.58 Aligned_cols=161 Identities=24% Similarity=0.343 Sum_probs=133.7
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhcccCCCCCCCCcccccccCcHHHHHHHHH-HHHHH
Q 009674 5 PSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLL-FAIPL 83 (529)
Q Consensus 5 p~~~~lP~W~~~g~i~~lll~llv~Df~~Yw~HRllH~~~Ly~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l-~~iPl 83 (529)
|.-..+|.|-. ++..+++++++.|+++||.||++|++++|+.+|++||....|...++.+.||+|+++.++. +..|+
T Consensus 109 ~~~~plPt~~~--~l~~l~i~~liEd~~fY~~HRL~H~~~~Yk~iHKvHHe~taPf~~sa~YaHp~E~~~lg~~~~~~p~ 186 (283)
T KOG0873|consen 109 PSGAPLPSWKE--MLAQLVVFFLIEDIGFYWSHRLFHHKWLYKYIHKVHHEYTAPFGLSAEYAHPLEHLFLGLGTVMGPA 186 (283)
T ss_pred CcCCCCCcHHH--HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhhhhcccCchhHhhhhcCHHHHHHcCChhhhhhH
Confidence 33355888888 9999999999999999999999999999999999999999999999999999999987752 33343
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHhcccceeecccccccccCcchhcccChhhhhhhhcCCCCCccCCcchhhhhcCC
Q 009674 84 VTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGT 163 (529)
Q Consensus 84 l~~~~lg~~si~~v~~y~i~~~~~~~l~Hsn~e~~P~~~f~~lp~L~yli~tP~~H~lHH~~~~~NYG~~~~lWDrLFGT 163 (529)
+ ++ +++.+.+++.++..+.....||||++ |+++.+.+|+ -.+.++|++||..+.+||+..|..||+|+||
T Consensus 187 ~----~~-~H~~t~wiw~~l~i~~t~~~HsGY~f-Pwsl~~~~pf----y~ga~~HD~HH~~f~~n~~~~f~~~D~i~GT 256 (283)
T KOG0873|consen 187 L----LC-GHVITLWIWIALRILETVESHSGYDF-PWSLSKLIPF----YGGAEHHDYHHLVFIGNFASVFGYLDRIHGT 256 (283)
T ss_pred H----hh-hHHHHHHHHHHHHHHHHhhccCCCCC-CccccccCcc----cCCCcccchhhhhccccccchhHHHHHHhcc
Confidence 3 33 38888888888888888899999997 8887776664 3589999999999999999999999999999
Q ss_pred CCCCC--chHHHHhhh
Q 009674 164 IDRSS--DSVYEKSLK 177 (529)
Q Consensus 164 ~~~~~--~~~~~~~~~ 177 (529)
..... .+..++..+
T Consensus 257 d~~~~~~k~~~~~~~~ 272 (283)
T KOG0873|consen 257 DSTYRALKELKEAIKK 272 (283)
T ss_pred CccHhhhhhHHHHHHH
Confidence 76433 334444443
No 7
>KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism]
Probab=99.87 E-value=8.4e-23 Score=202.69 Aligned_cols=144 Identities=21% Similarity=0.365 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhcccCCCCCCCCcccccccCcHHHHHHHHHHHHHHHHHHHhhhhhHH
Q 009674 16 DGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIA 95 (529)
Q Consensus 16 ~g~i~~lll~llv~Df~~Yw~HRllH~~~Ly~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~~lg~~si~ 95 (529)
+..++.+.++++..||.+||.||.+|++.+||+.|+.||+++..+|+++.++||++.++.+ +|-.+..+..+.+..
T Consensus 126 ~~~~~~i~~flfF~Df~iYw~HR~lH~~~vy~~LH~~HH~~~~~tpfAslafhpidg~lqa----ip~~I~~Fi~Plh~~ 201 (312)
T KOG0872|consen 126 FLLFVSIFLFLFFTDFGIYWAHRELHHRGVYKRLHKPHHIWNICTPFASLAFHPIDGFLQA----IPYHIYPFIFPLHKV 201 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhcchhhhhhccCchhhhhcCcchhHhhh----chhHheeeeecchHH
Confidence 3478888888999999999999999999999999999999999999999999999998765 455555544455666
Q ss_pred HHHHHHHHHHHHHHhcccceeecccccccccCcchhcccChhhhhhhhcCCCCCccCCcchhhhhcCCCCCCCchHHH
Q 009674 96 SFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYE 173 (529)
Q Consensus 96 ~v~~y~i~~~~~~~l~Hsn~e~~P~~~f~~lp~L~yli~tP~~H~lHH~~~~~NYG~~~~lWDrLFGT~~~~~~~~~~ 173 (529)
+.+....+..++..+.|.+.-. -+...+++|++|..||.+++.|||.++.+|||+|||++.|.++.++
T Consensus 202 t~L~l~~f~~iwt~~IHd~~~~----------~l~~~ingaahHtvHH~~f~~NYG~~tilwDrmfgSfr~p~~~~~d 269 (312)
T KOG0872|consen 202 TYLSLFTFVNIWTISIHDGIYG----------SLNPPINGAAHHTVHHTYFDYNYGQYTILWDRMFGSFRAPDHEDFD 269 (312)
T ss_pred HHHHHHHHHHhHheeeeccccc----------cccCccccccccceeeeeEecCCCcEEEeHHhccCcccCccccccc
Confidence 6665556668888899998632 1233578999999999999999999999999999999988776555
No 8
>KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism]
Probab=99.72 E-value=5.4e-19 Score=171.05 Aligned_cols=147 Identities=20% Similarity=0.348 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhch-hhhhhhhcccCCCCCCCCcccccccCcHHHHHHHHH-HHHHHHHHHHhhhhhHH
Q 009674 18 VILTILVHMGPVEFLYYWFHRALHH-HYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLL-FAIPLVTTMVLKNASIA 95 (529)
Q Consensus 18 ~i~~lll~llv~Df~~Yw~HRllH~-~~Ly~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l-~~iPll~~~~lg~~si~ 95 (529)
....++..+++.|.|.|++||.+|. +.||+.+|++||+-.+|....+.+.||+|.++...+ -++..++ .| .|+-
T Consensus 122 ~A~q~f~aflviDtWQYF~HRymH~NK~LYk~iHs~HHrL~VPYayGALyNhP~EGllLDT~G~gla~l~---sg-lspr 197 (287)
T KOG0874|consen 122 LARQFFAAFLVIDTWQYFLHRYMHMNKFLYKHIHSQHHRLIVPYAYGALYNHPVEGLLLDTIGGGLAFLL---SG-LSPR 197 (287)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhceeEecchhhhhhhcCcchhhhhhhhchHHHHHH---cC-CCcc
Confidence 3456777788999999999999996 789999999999999999999999999999987643 2222222 12 2333
Q ss_pred HHHHHHHHHHHHHHhcccceeecccccccccCcchhcccChhhhhhhhcC--CCCCcc-CCcchhhhhcCCCCCCCchHH
Q 009674 96 SFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ--FRTNYS-LFMPIYDYIYGTIDRSSDSVY 172 (529)
Q Consensus 96 ~v~~y~i~~~~~~~l~Hsn~e~~P~~~f~~lp~L~yli~tP~~H~lHH~~--~~~NYG-~~~~lWDrLFGT~~~~~~~~~ 172 (529)
...++..+..+-..-.|||+- .|..+|+++ +-+...||++||.. .++||+ .||.+||+++|||.+.+-|..
T Consensus 198 ~aiifFtfaTiKTVDDHCGy~-lP~dpfqm~-----F~NNa~YHDiHHQ~yG~k~NFsQPFFtfWD~ilgTYmp~~~E~~ 271 (287)
T KOG0874|consen 198 TAIIFFTFATIKTVDDHCGYW-LPGDPFQMF-----FPNNAAYHDIHHQLYGTKYNFSQPFFTFWDRILGTYMPYSLEKR 271 (287)
T ss_pred ceEEEEEeeeeeeeccccccc-cCCCceeEe-----ccCCchhhhhhhhhhccccccCCcHHHHHHHHHhhcCCchhccc
Confidence 322222222333456999995 488766642 34689999999998 689998 589999999999988776554
Q ss_pred HH
Q 009674 173 EK 174 (529)
Q Consensus 173 ~~ 174 (529)
.+
T Consensus 272 ~e 273 (287)
T KOG0874|consen 272 LE 273 (287)
T ss_pred cc
Confidence 44
No 9
>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways []. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.; GO: 0005506 iron ion binding, 0016491 oxidoreductase activity, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.69 E-value=4.8e-17 Score=141.47 Aligned_cols=113 Identities=28% Similarity=0.437 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHHHhhchhhhhhhhcccCCCCCCCCcccccccCcHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 009674 23 LVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYII 102 (529)
Q Consensus 23 ll~llv~Df~~Yw~HRllH~~~Ly~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~~lg~~si~~v~~y~i 102 (529)
++.+++.|+++||+||++|..+++|++|+.||++++++++++.+.+|+|.++..++ ++++...++..+...++++.+
T Consensus 2 ~~~~l~~d~~~Y~~HRl~H~~~~l~~~H~~HH~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 78 (114)
T PF04116_consen 2 LLGFLLWDFWEYWMHRLLHKIPFLWRIHKVHHSPKNPTPLSAFRFHPLEALLLALL---PLLLPLLLLPFHALAFLLGIA 78 (114)
T ss_pred eeeHHHHHHHHHHHHHHHhcCchHHHHHHHHhCCcccCchHHHHcChHHHHHHHHH---HHHHHHHHHhHhHHHHHHHHH
Confidence 34567899999999999995444449999999999999999999999999987653 332222334456777777888
Q ss_pred HHHHHHHhcccceeecccccccccCcchhcccChhhhhhhhc
Q 009674 103 YVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHT 144 (529)
Q Consensus 103 ~~~~~~~l~Hsn~e~~P~~~f~~lp~L~yli~tP~~H~lHH~ 144 (529)
+..+.+.++|+|+.. + ..+.++++..+|++|++||+
T Consensus 79 ~~~~~~~~~H~~~~~-~-----~~~~~~~~~~~~~~H~~HH~ 114 (114)
T PF04116_consen 79 LFYLWYIFIHSGYHH-R-----FPPRLRYLFVTPRHHDLHHS 114 (114)
T ss_pred HHHHHHHHhhcCccC-C-----CCCcchhHhcCHHHHHhhCc
Confidence 888999999999821 1 12456778899999999995
No 10
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=99.37 E-value=3e-12 Score=122.68 Aligned_cols=166 Identities=14% Similarity=0.083 Sum_probs=117.1
Q ss_pred ecCChhHHHHHHhcCcC---------CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccc
Q 009674 335 VDGSSLAAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH 403 (529)
Q Consensus 335 v~Gnsltaavv~~~i~~---------~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~ 403 (529)
|+||++|||++++.+.+ ..++|+++|+|| .+|+++++.|+++|.+|.+ |+.++.+++.+++....+.
T Consensus 1 ~~G~~~ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG--~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~ 78 (194)
T cd01078 1 SNGSNTTAAAAVAAAGKALELMGKDLKGKTAVVLGGTG--PVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGE 78 (194)
T ss_pred CCCcHHHHHHHHHHHHHHHHHhCcCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence 68999999999988875 246999999999 9999999999999999988 8889999888776433222
Q ss_pred cee--eeccc---cc--CcceEEE----EcCcCChhhhhcCC-CCceeecccccCcc-----CCCCCceeecCCccccCC
Q 009674 404 NLV--LSTSY---AA--HKTKIWL----VGDDLTGKEQARAP-KGTIFIPYTQIPPR-----KLRKDCFYHSTPAMIIPP 466 (529)
Q Consensus 404 ~l~--~~~~~---~~--~~~~vwi----vg~~~~~~~q~~a~-~G~~f~~~~~~~~~-----~~R~dc~y~~~~a~~~P~ 466 (529)
.+. ...+. ++ ++++++| .|.. .+.+..+.+ +|.+++|+...|+. +.|+|.++.+++...-|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~diVi~at~~g~~-~~~~~~~~~~~~~vv~D~~~~~~~~~~~~~~~~~~~~~~g~~~~g~- 156 (194)
T cd01078 79 GVGAVETSDDAARAAAIKGADVVFAAGAAGVE-LLEKLAWAPKPLAVAADVNAVPPVGIEGIDVPDKGVDREGKVPYGA- 156 (194)
T ss_pred cEEEeeCCCHHHHHHHHhcCCEEEECCCCCce-echhhhcccCceeEEEEccCCCCCCcccccccCCceecCCCeEEEe-
Confidence 212 12222 22 5677776 3332 122222233 48999999954443 56899999998733212
Q ss_pred CCccccccccccCcchhHHHHHhhHhhhhcCCCCCccchhhhhHHHHHHHHHhc
Q 009674 467 SLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRH 520 (529)
Q Consensus 467 ~~~~~~~~e~~~p~r~~~Ac~a~~~v~alEgw~~~e~G~iv~~id~i~~aa~kH 520 (529)
...+++|+++.+||++|.|. +|++..+ .++|-+.|+||
T Consensus 157 ------~~~~g~~~~~~~~~~ae~~~--~~~~~~~--------~~~~~~~~~~~ 194 (194)
T cd01078 157 ------IGVGGLKMKTHRACIAKLFE--SNPLVLD--------AEEIYDLAKEM 194 (194)
T ss_pred ------eccchhHHHHHHHHHHHHhh--cCCeeec--------hHHHHHHHhcC
Confidence 13478999999999999998 4765443 55666666665
No 11
>PLN02434 fatty acid hydroxylase
Probab=99.04 E-value=1.9e-09 Score=107.68 Aligned_cols=136 Identities=20% Similarity=0.270 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-hch-------hhhhhhhcccCCCCCCCCcccccccCcHHHHHHHHHHHHHHHHHH--
Q 009674 18 VILTILVHMGPVEFLYYWFHRA-LHH-------HYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTM-- 87 (529)
Q Consensus 18 ~i~~lll~llv~Df~~Yw~HRl-lH~-------~~Ly~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~-- 87 (529)
.+..+++.+++..+.+|.+||. +|. ..+....|..||.. |.......++|.-.++....+..++..++
T Consensus 83 ~~~~~~~G~~~wtl~EY~lHRflfH~~p~~~~~~~~hfllHg~HH~~--P~D~~rLv~PP~~~~~l~~~~~~l~~~~~~~ 160 (237)
T PLN02434 83 VVLMVAFGVFIWTLLEYILHRFLFHIKTKSYWGNTAHYLLHGCHHKH--PMDGLRLVFPPAATAILCVPFWNLIALFATP 160 (237)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHhhcC--CCCCCCeecCcHHHHHHHHHHHHHHHHHcch
Confidence 3455667788899999999997 685 12334679999977 44444455777665444332222111110
Q ss_pred Hhh-hhhHHHHHHHHHHHHHHHHhcccceeecccccccccCcchhcccChhhhhhhhcC-CCCCccCCcchhhhhcCCCC
Q 009674 88 VLK-NASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTID 165 (529)
Q Consensus 88 ~lg-~~si~~v~~y~i~~~~~~~l~Hsn~e~~P~~~f~~lp~L~yli~tP~~H~lHH~~-~~~NYG~~~~lWDrLFGT~~ 165 (529)
..+ ..-...+.+|+. .+......|.+ .|+. ++++ .--++|..||-+ .+.|||...++||++|||+-
T Consensus 161 ~~a~~~~~G~l~gYl~-Yd~~Hy~lH~~---~p~~-----~~~r---~lkr~H~~HHfk~~~~~fGVTs~~wD~vFGT~~ 228 (237)
T PLN02434 161 ATAPALFGGGLLGYVM-YDCTHYFLHHG---QPST-----DVLR---NLKKYHLNHHFRDQDKGFGITSSLWDRVFGTLP 228 (237)
T ss_pred hHHHHHHHHHHHHHHH-HHHHHHHHHhc---Ccch-----HHHH---HHHHHHHHHcCCCCCCCCCcCchHHHHhcCCCC
Confidence 000 011123455654 45666677764 2421 1222 246999999977 79999999999999999984
Q ss_pred CC
Q 009674 166 RS 167 (529)
Q Consensus 166 ~~ 167 (529)
++
T Consensus 229 ~~ 230 (237)
T PLN02434 229 PS 230 (237)
T ss_pred Cc
Confidence 43
No 12
>KOG0539 consensus Sphingolipid fatty acid hydroxylase [Lipid transport and metabolism]
Probab=98.17 E-value=6.1e-06 Score=80.68 Aligned_cols=136 Identities=19% Similarity=0.272 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHHHHHHh-hchhh---------hhhhhcccCCCCCCCCcccccccCcHHHHHHHHHHHHHHHHHH--
Q 009674 20 LTILVHMGPVEFLYYWFHRA-LHHHY---------LYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTM-- 87 (529)
Q Consensus 20 ~~lll~llv~Df~~Yw~HRl-lH~~~---------Ly~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~-- 87 (529)
.-+++.++...+.+|.+||+ +|..+ +---+|..||.. |..-.-..++|.-..+....+..++..+.
T Consensus 85 ~~f~~Gvf~WTl~EY~lHRflFH~k~~~~s~~~~t~Hfl~HGcHHk~--P~D~~RLVfPP~~~~il~~pfy~~~~~vl~~ 162 (240)
T KOG0539|consen 85 GLFVIGVFTWTLIEYTLHRFLFHIKPNPDSYWLITLHFLIHGCHHKL--PMDGYRLVFPPTPFAILAAPFYLILSLVLPH 162 (240)
T ss_pred HHHHHHHHHHHHHHHHHHheEEEecCCCCchHHHHHHHHHhcccccC--CCCCceEecCCchHHHHHHHHHHHHHHhcCc
Confidence 34556677899999999998 57641 112469999977 22233356777766655544433333221
Q ss_pred Hhh-hhhHHHHHHHHHHHHHHHHhcccceeecccccccccCcchhcccChhhhhhhhcC-CCCCccCCcchhhhhcCCCC
Q 009674 88 VLK-NASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTID 165 (529)
Q Consensus 88 ~lg-~~si~~v~~y~i~~~~~~~l~Hsn~e~~P~~~f~~lp~L~yli~tP~~H~lHH~~-~~~NYG~~~~lWDrLFGT~~ 165 (529)
..+ ..-...+++|+.|....=.+.|.+- |+. +.+ -..-++|.-||-+ .+..||....+||++|||+-
T Consensus 163 ~~~~a~faG~l~GYV~YDmtHYyLHhg~p---~~~-----~~~---~~lK~yHl~HHfk~q~~GfGItS~lWD~VFgTl~ 231 (240)
T KOG0539|consen 163 PVAPAGFAGGLLGYVCYDMTHYYLHHGSP---PKR-----PYL---KHLKKYHLNHHFKHQDLGFGITSSLWDYVFGTLG 231 (240)
T ss_pred chhhhhhccchhhhhhhhhhhhhhhcCCC---CCc-----hHH---HHHHHHHhhhhhhccccCccccHHHHHHHhccCC
Confidence 000 0111345677765433333444431 221 222 2346899999976 89999999999999999986
Q ss_pred CCC
Q 009674 166 RSS 168 (529)
Q Consensus 166 ~~~ 168 (529)
...
T Consensus 232 ~~~ 234 (240)
T KOG0539|consen 232 PLK 234 (240)
T ss_pred CCc
Confidence 654
No 13
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.51 E-value=0.0002 Score=65.42 Aligned_cols=92 Identities=21% Similarity=0.241 Sum_probs=64.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE----Ec
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VG 422 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg 422 (529)
..++|+++||. ..|++++.+|.+.|.+ +++ |+.+|.++|.++.+... -..+...++.+ .+++++| +|
T Consensus 11 ~~~~vlviGaG---g~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~-~~~~~~~~~~~~~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 11 KGKRVLVIGAG---GAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVN-IEAIPLEDLEEALQEADIVINATPSG 86 (135)
T ss_dssp TTSEEEEESSS---HHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCS-EEEEEGGGHCHHHHTESEEEE-SSTT
T ss_pred CCCEEEEECCH---HHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccc-cceeeHHHHHHHHhhCCeEEEecCCC
Confidence 57899999995 7999999999988988 777 99999999999873322 11122334443 5678877 44
Q ss_pred -CcCChhhhhcCCCCc-eeecccccCcc
Q 009674 423 -DDLTGKEQARAPKGT-IFIPYTQIPPR 448 (529)
Q Consensus 423 -~~~~~~~q~~a~~G~-~f~~~~~~~~~ 448 (529)
..++++.....++.. +++|.+ +|+.
T Consensus 87 ~~~i~~~~~~~~~~~~~~v~Dla-~Pr~ 113 (135)
T PF01488_consen 87 MPIITEEMLKKASKKLRLVIDLA-VPRD 113 (135)
T ss_dssp STSSTHHHHTTTCHHCSEEEES--SS-S
T ss_pred CcccCHHHHHHHHhhhhceeccc-cCCC
Confidence 356677775554444 899998 6665
No 14
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.41 E-value=0.00049 Score=74.28 Aligned_cols=140 Identities=19% Similarity=0.164 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHHHhhchhhhhhhhcccCCCCCCCCccc---------ccccCcHHHHHHHHHHHHHHHHHHHh-hhh
Q 009674 23 LVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPIT---------SVIHPFAEHIVYFLLFAIPLVTTMVL-KNA 92 (529)
Q Consensus 23 ll~llv~Df~~Yw~HRllH~~~Ly~r~H~~HHss~~p~p~t---------a~~~hplE~ll~~~l~~iPll~~~~l-g~~ 92 (529)
+..+++.|..+=.+|-+.|....+.|.|..||....++..- ..++.+.|.++...+..+|..+.... ...
T Consensus 13 ~~~~~~~~~~~d~~h~~~h~~~~l~~~h~~hh~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 92 (406)
T PRK07424 13 LGSILWVEIVRDSYHALAHQWNPLYRLHNWHHRVFRPDLSVVSEEIYRKAHWYNDVPEALVMLLFGTLPVLLLQQWNVPY 92 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhchHHHHHHHhHHhhcCCcCCcccHHHHhhhhhhcCCHHHHHHHHHhhHHHHHHhhhcccc
Confidence 34456677777778888887666679999999998765332 45888999776654433333322211 000
Q ss_pred hHHH--HHHHHHHHH---HH---HHhcc-ccee--ecccccccccCcchhcccChhhhhhhhcCCC-CCccCCcchhhhh
Q 009674 93 SIAS--FVGYIIYVD---FM---NNMGH-CNFE--FIPMWLFTVFPPLKFLMYTPSYHSLHHTQFR-TNYSLFMPIYDYI 160 (529)
Q Consensus 93 si~~--v~~y~i~~~---~~---~~l~H-sn~e--~~P~~~f~~lp~L~yli~tP~~H~lHH~~~~-~NYG~~~~lWDrL 160 (529)
.+.. -..|.+.+. +. ..... ++-+ -.|+. +...| +..+..+.||..||-..+ .-||..+++.|+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~d~~h~~~~-~~~~~--~~~~v~~~~h~rh~~~~~~~~~~~~~~~~d~~ 169 (406)
T PRK07424 93 GWLAWLGVLYTLTFLFGAIARGLGLPNADELTDLTHLPGP-FETLP--SQWFVNRPYHWRHHFDNQNAYYCGTFTLVDKL 169 (406)
T ss_pred cchhhhhhHHHHHHHHHHHHHhcccccccccccccCCCCc-ccCCC--ccCeecCceeEEEEeccccceeeeeEEEeehh
Confidence 0000 011222121 11 11112 1011 11321 22221 224678899999998754 7889999999999
Q ss_pred cCCCC
Q 009674 161 YGTID 165 (529)
Q Consensus 161 FGT~~ 165 (529)
.||..
T Consensus 170 ~~ta~ 174 (406)
T PRK07424 170 MGTAL 174 (406)
T ss_pred cCccc
Confidence 99964
No 15
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.38 E-value=0.00035 Score=71.40 Aligned_cols=50 Identities=16% Similarity=0.240 Sum_probs=45.6
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc
Q 009674 351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ 402 (529)
Q Consensus 351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~ 402 (529)
...+.++++||++ -||+++|+.|+++|..|+| |++||+++|++++....+
T Consensus 4 ~~~~~~lITGASs--GIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~ 55 (265)
T COG0300 4 MKGKTALITGASS--GIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTG 55 (265)
T ss_pred CCCcEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhC
Confidence 3567899999997 9999999999999999999 999999999999887663
No 16
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.37 E-value=0.00025 Score=71.49 Aligned_cols=44 Identities=25% Similarity=0.323 Sum_probs=41.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
+-|+++||++ -||.|+|+.|++.|.+|.+ |++||+++|+++++.
T Consensus 7 kv~lITGASS--GiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~ 52 (246)
T COG4221 7 KVALITGASS--GIGEATARALAEAGAKVVLAARREERLEALADEIGA 52 (246)
T ss_pred cEEEEecCcc--hHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc
Confidence 6789999996 9999999999999999999 999999999999886
No 17
>PLN02601 beta-carotene hydroxylase
Probab=97.26 E-value=0.002 Score=65.60 Aligned_cols=132 Identities=21% Similarity=0.323 Sum_probs=73.1
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHh-hchhhhhhhhcccCCCCCCCCcccccccCcHHHHHHHHHHHHHHHHH
Q 009674 8 SNLRFWRSDGVILTILVHMGPVEFLYYWFHRA-LHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTT 86 (529)
Q Consensus 8 ~~lP~W~~~g~i~~lll~llv~Df~~Yw~HRl-lH~~~Ly~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~ 86 (529)
.++|.-..-+.+..++..++.+|++-+|.||. +|- +.|..|+-||.... .++- ..+ ++++++++|.+.+
T Consensus 126 g~~p~~em~~~~al~lgtfvgMEf~Aw~aHKYvMHG--~LW~lH~sHH~Pr~-g~FE--~ND-----lFaVifAvpAIaL 195 (303)
T PLN02601 126 GEVSMLEMFGTFALSVGAAVGMEFWARWAHRALWHD--SLWNMHESHHKPRE-GAFE--LND-----VFAIVNAVPAIGL 195 (303)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cchhhhhhcCCCCC-CCcc--ccc-----chhhhhHHHHHHH
Confidence 34554222223444456677899999999997 676 34788999998764 2222 111 1223344444444
Q ss_pred HHhhhhh------H-----HHHHHHH-HHHHHHHHhcccceeecccccccccCcchhcccChhhhhhhhcC--CCCCccC
Q 009674 87 MVLKNAS------I-----ASFVGYI-IYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ--FRTNYSL 152 (529)
Q Consensus 87 ~~lg~~s------i-----~~v~~y~-i~~~~~~~l~Hsn~e~~P~~~f~~lp~L~yli~tP~~H~lHH~~--~~~NYG~ 152 (529)
++.|..+ . ..+.+|. +|+...+.+.|--+.+.| ..+-|+++. -..-|.+||+. ...+||.
T Consensus 196 ~~~G~~~~g~~p~~~fgiGlGITlYGiaYffVHDgLVHqRfp~~~---~a~~~Y~rr---l~~AHklHHa~Ke~Gv~FGf 269 (303)
T PLN02601 196 LYYGFFNKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGP---IANVPYLRK---VAAAHQLHHTDKFKGVPYGL 269 (303)
T ss_pred HHHhhccccccHHHHHHHHHhHHHHHHHHHHHhhhhhccccccCC---CCCCHHHHH---HHHHHHhhccCCcCCccceE
Confidence 4333210 0 1122232 355556667776433221 122244444 56899999984 5789998
Q ss_pred Ccc
Q 009674 153 FMP 155 (529)
Q Consensus 153 ~~~ 155 (529)
++.
T Consensus 270 ll~ 272 (303)
T PLN02601 270 FLG 272 (303)
T ss_pred Eec
Confidence 754
No 18
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.11 E-value=0.00062 Score=70.68 Aligned_cols=47 Identities=17% Similarity=0.283 Sum_probs=42.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ 402 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~ 402 (529)
.=.+|+|||. +||++-|+-|||||.+|.| |+++||+.+++|+.+...
T Consensus 50 ~WAVVTGaTD--GIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~ 98 (312)
T KOG1014|consen 50 SWAVVTGATD--GIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK 98 (312)
T ss_pred CEEEEECCCC--cchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC
Confidence 4567889997 9999999999999999999 999999999999877664
No 19
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.06 E-value=0.0011 Score=71.69 Aligned_cols=153 Identities=17% Similarity=0.231 Sum_probs=97.0
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--c-
Q 009674 351 KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--G- 422 (529)
Q Consensus 351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g- 422 (529)
...++|+++|+ | .+|+.++++|...|. +|++ |+.++.+.++++++... +...++.+ ..++++|. |
T Consensus 180 ~~~~~vlViGa-G--~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~----~~~~~~~~~l~~aDvVI~aT~s 252 (423)
T PRK00045 180 LSGKKVLVIGA-G--EMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEA----IPLDELPEALAEADIVISSTGA 252 (423)
T ss_pred ccCCEEEEECc-h--HHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcE----eeHHHHHHHhccCCEEEECCCC
Confidence 35679999998 6 999999999998897 6776 88889888888865321 22233332 56677662 2
Q ss_pred --CcCChhhhhcC-----CCCceeecccccCcc-C--CC--CCceeecCCccccCCCCccccccccccCcchhHHHHHhh
Q 009674 423 --DDLTGKEQARA-----PKGTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAG 490 (529)
Q Consensus 423 --~~~~~~~q~~a-----~~G~~f~~~~~~~~~-~--~R--~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r~~~Ac~a~~ 490 (529)
-.+++++...+ .++.+++|.+ +|+. + +. +++.+. .=++++. .++.....|.-.+-.|+.
T Consensus 253 ~~~~i~~~~l~~~~~~~~~~~~vviDla-~Prdid~~v~~l~~v~l~------~vDdl~~--~~~~n~~~r~~~~~~a~~ 323 (423)
T PRK00045 253 PHPIIGKGMVERALKARRHRPLLLVDLA-VPRDIEPEVGELPGVYLY------DVDDLQE--IVEENLAQRQEAAEKAEA 323 (423)
T ss_pred CCcEEcHHHHHHHHhhccCCCeEEEEeC-CCCCCcccccccCCeEEE------EHHHHHH--HHHhhHHHHHHHHHHHHH
Confidence 24556665443 3568899998 6554 1 11 233211 1112221 244566678888899999
Q ss_pred Hhh----hhcCCCCC-ccch-h--h-hhHHHHHHHHHh
Q 009674 491 IIH----ALEGWDLN-ECGQ-T--M-CDIHQVWHASLR 519 (529)
Q Consensus 491 ~v~----alEgw~~~-e~G~-i--v-~~id~i~~aa~k 519 (529)
||- .|+.|... .... | + +++++|-+.-++
T Consensus 324 ii~~~~~~f~~~~~~~~~~p~I~~lr~~~~~i~~~el~ 361 (423)
T PRK00045 324 IVEEEVAEFMEWLRSLEVVPTIRALREQAEEIREEELE 361 (423)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 986 67778655 5666 5 4 777666554443
No 20
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.05 E-value=0.0017 Score=65.80 Aligned_cols=124 Identities=17% Similarity=0.194 Sum_probs=78.6
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc
Q 009674 335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA 412 (529)
Q Consensus 335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 412 (529)
|||-....+.--.......+.|+++|+ | -+|+++|..|++.|.+|.+ |+.++.+++.+++.... . +...++.
T Consensus 99 TD~~G~~~~l~~~~~~~~~k~vliiGa-G--g~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~--~-~~~~~~~ 172 (270)
T TIGR00507 99 TDGIGLVSDLERLIPLRPNQRVLIIGA-G--GAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG--E-IQAFSMD 172 (270)
T ss_pred CCHHHHHHHHHhcCCCccCCEEEEEcC-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC--c-eEEechh
Confidence 667776666321122334578999999 6 8999999999999999888 88889998888764321 1 1111222
Q ss_pred --c-CcceEEE----Ec--CcCC--hhhhhcCCCCceeecccccCcc-----CCC-CCceeecCCcccc
Q 009674 413 --A-HKTKIWL----VG--DDLT--GKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII 464 (529)
Q Consensus 413 --~-~~~~vwi----vg--~~~~--~~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~ 464 (529)
. .+++++| +| ..++ +-+....++|.+++|.+=.|++ +.| +.|.+..+..|-+
T Consensus 173 ~~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T~ll~~A~~~G~~~vdG~~Ml~ 241 (270)
T TIGR00507 173 ELPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGETPFLAEAKSLGTKTIDGLGMLV 241 (270)
T ss_pred hhcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCCHHHHHHHHCCCeeeCCHHHHH
Confidence 2 4567777 22 1111 1112345788899999865554 223 6788888777754
No 21
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.05 E-value=0.0018 Score=66.14 Aligned_cols=125 Identities=15% Similarity=0.121 Sum_probs=78.0
Q ss_pred eecCChhHHHHHH-hcCcCCCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeee-
Q 009674 334 VVDGSSLAAAVVV-NSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLS- 408 (529)
Q Consensus 334 vv~Gnsltaavv~-~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~- 408 (529)
=|||-...++.-- .......++|+|+|+ | -+|++++.+|.+.| .+|++ |+.++.+++++++..... +.+
T Consensus 103 NTD~~G~~~~l~~~~~~~~~~k~vlVlGa-G--g~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~---~~~~ 176 (278)
T PRK00258 103 NTDGIGFVRALEERLGVDLKGKRILILGA-G--GAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGK---AELD 176 (278)
T ss_pred cccHHHHHHHHHhccCCCCCCCEEEEEcC-c--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc---eeec
Confidence 3667666666542 123345678999998 6 89999999999999 67888 999999999888653211 112
Q ss_pred cccc-c-CcceEEE----EcC----cCChhhhhcCCCCceeecccccCcc-C----CC-CCceeecCCcccc
Q 009674 409 TSYA-A-HKTKIWL----VGD----DLTGKEQARAPKGTIFIPYTQIPPR-K----LR-KDCFYHSTPAMII 464 (529)
Q Consensus 409 ~~~~-~-~~~~vwi----vg~----~~~~~~q~~a~~G~~f~~~~~~~~~-~----~R-~dc~y~~~~a~~~ 464 (529)
.+.. . ..++++| +|- ..+|-+....++++.++|++--|.. . .| +-|.+..+..|-+
T Consensus 177 ~~~~~~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~~~G~~~~~G~~Ml~ 248 (278)
T PRK00258 177 LELQEELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPTPFLAWAKAQGARTIDGLGMLV 248 (278)
T ss_pred ccchhccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCCHHHHHHHHCcCeecCCHHHHH
Confidence 1222 2 4567777 332 1223333455778888888743322 1 12 5566666666643
No 22
>PLN00203 glutamyl-tRNA reductase
Probab=96.88 E-value=0.0036 Score=69.72 Aligned_cols=210 Identities=15% Similarity=0.207 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHcCCcEEEec-ccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcC----cC---CCcEEEE
Q 009674 287 SLIEEAILEADAKGVKVISLG-LLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSL----PK---TTAHVLL 358 (529)
Q Consensus 287 ~~I~~Ai~~A~k~G~kv~~LG-~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~i----~~---~~~~V~~ 358 (529)
.+|-+|...|++.|.- | .||. |=.. .+.+.|.-. =+.++-.|..=.+.++++-. +. ..++|+|
T Consensus 201 gQVK~A~~~A~~~g~~----g~~L~~---LF~~-Ai~~~KrVR-teT~I~~~~vSv~s~Av~la~~~~~~~~l~~kkVlV 271 (519)
T PLN00203 201 AQVKQVVKVGQGVDGF----GRNLSG---LFKH-AITAGKRVR-TETNIASGAVSVSSAAVELALMKLPESSHASARVLV 271 (519)
T ss_pred HHHHHHHHHHHHcCCc----cHHHHH---HHHH-HHHHHHHHh-hccCCCCCCcCHHHHHHHHHHHhcCCCCCCCCEEEE
Confidence 4578888899888742 2 2222 1111 244444422 22445555443333333332 32 3689999
Q ss_pred ecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE----cC-cCChh
Q 009674 359 RGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GD-DLTGK 428 (529)
Q Consensus 359 ~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~-~~~~~ 428 (529)
+|+ | ++|+++++.|..+|. +|++ |+.++.+.++++.+. .........++.+ .+++++|. ++ .++++
T Consensus 272 IGA-G--~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g-~~i~~~~~~dl~~al~~aDVVIsAT~s~~pvI~~e 347 (519)
T PLN00203 272 IGA-G--KMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPD-VEIIYKPLDEMLACAAEADVVFTSTSSETPLFLKE 347 (519)
T ss_pred EeC-H--HHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCC-CceEeecHhhHHHHHhcCCEEEEccCCCCCeeCHH
Confidence 999 6 999999999998886 5777 899999999988642 1111011223332 66777662 22 57777
Q ss_pred hhhcCCC-------CceeecccccCcc-C--CC--CCceeecCCccccCCCCccccccccccCcchhHHHHHhhHhh---
Q 009674 429 EQARAPK-------GTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH--- 493 (529)
Q Consensus 429 ~q~~a~~-------G~~f~~~~~~~~~-~--~R--~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r~~~Ac~a~~~v~--- 493 (529)
..+.+++ ..+|+|.+ +|+. + +. +++.+.. -+|++. .++-.+..|.-.+=.|+.||-
T Consensus 348 ~l~~~~~~~~~~~~~~~~IDLA-vPRdIdp~v~~l~~v~lyd------iDdL~~--i~~~n~~~R~~~~~~Ae~II~ee~ 418 (519)
T PLN00203 348 HVEALPPASDTVGGKRLFVDIS-VPRNVGACVSELESARVYN------VDDLKE--VVAANKEDRLRKAMEAQTIIREES 418 (519)
T ss_pred HHHHhhhcccccCCCeEEEEeC-CCCCCccccccCCCCeEEE------eccHHH--HHHHhHHHHHHHHHHHHHHHHHHH
Confidence 7777654 25899999 8876 2 21 2222111 123332 245567777777777888875
Q ss_pred -hhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 009674 494 -ALEGWDLN-ECGQ-T--M-CDIHQVWHASL 518 (529)
Q Consensus 494 -alEgw~~~-e~G~-i--v-~~id~i~~aa~ 518 (529)
+|+.|... +... | + ++.+.|-+.-+
T Consensus 419 ~~F~~w~~~~~~~p~I~~lr~~~~~i~~~El 449 (519)
T PLN00203 419 KNFEAWRDSLETVPTIKKLRSYAERIRAAEL 449 (519)
T ss_pred HHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 78888766 6777 5 4 77776655443
No 23
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.82 E-value=0.0081 Score=62.75 Aligned_cols=140 Identities=14% Similarity=0.114 Sum_probs=88.8
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 009674 299 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 369 (529)
Q Consensus 299 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig~ 369 (529)
.|+|+++-=-=|....+-.-.+..+.-+|+ +.-+-+.||+.+|+ |++.+-+ +++.++|.++|+- .+|+
T Consensus 64 ~g~K~~~~~p~n~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaa~sala~~~la~~~~~~v~iiGaG---~~a~ 140 (325)
T PRK08618 64 LGLKIVSVVPENKKKGKPTIPGTVILSDFETGEVLAILDGTYLTQIRTGALSGVATKYLAREDAKTLCLIGTG---GQAK 140 (325)
T ss_pred EEEEEEeecCCCcccCCCcceEEEEEEeCCCCceEEEEccchhhhhhHHHHHHHHHHHhcCCCCcEEEEECCc---HHHH
Confidence 588887752222212222111245555544 45599999999985 3334555 5678899999998 7999
Q ss_pred HHHHHHh-ccCc-EEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCcCC-hh-hhhcCCCCceeec
Q 009674 370 AVASSLC-QMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLT-GK-EQARAPKGTIFIP 441 (529)
Q Consensus 370 ava~~L~-~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~-~~-~q~~a~~G~~f~~ 441 (529)
+.+.+|+ .+++ +|.+ |++++.+++.+++..+.+.......++++ ++++++|....-. |. + .+.++|++++.
T Consensus 141 ~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~p~i~-~~l~~G~hV~~ 219 (325)
T PRK08618 141 GQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKTPVFS-EKLKKGVHINA 219 (325)
T ss_pred HHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCCcchH-HhcCCCcEEEe
Confidence 9999887 4454 4444 99999999988765443333223446664 7788877433222 21 2 56799999987
Q ss_pred c
Q 009674 442 Y 442 (529)
Q Consensus 442 ~ 442 (529)
+
T Consensus 220 i 220 (325)
T PRK08618 220 V 220 (325)
T ss_pred c
Confidence 7
No 24
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.73 E-value=0.0031 Score=58.70 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=32.5
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 009674 356 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 392 (529)
Q Consensus 356 V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~ 392 (529)
|+|+|||| .+|+.+++.|.++|.+|.. |++++.++
T Consensus 1 I~V~GatG--~vG~~l~~~L~~~~~~V~~~~R~~~~~~~ 37 (183)
T PF13460_consen 1 ILVFGATG--FVGRALAKQLLRRGHEVTALVRSPSKAED 37 (183)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTSEEEEEESSGGGHHH
T ss_pred eEEECCCC--hHHHHHHHHHHHCCCEEEEEecCchhccc
Confidence 78999999 9999999999999999999 88887775
No 25
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.63 E-value=0.0072 Score=55.17 Aligned_cols=123 Identities=15% Similarity=0.140 Sum_probs=72.9
Q ss_pred cCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeecccc
Q 009674 336 DGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA 412 (529)
Q Consensus 336 ~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 412 (529)
||-.+..|.--.++....++|.++|+ | .+|+++++.|++.| .+|.+ |+.++.+++.+++.... .. ....+.+
T Consensus 2 d~~g~~~a~~~~~~~~~~~~i~iiG~-G--~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~ 76 (155)
T cd01065 2 DGLGFVRALEEAGIELKGKKVLILGA-G--GAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IA-IAYLDLE 76 (155)
T ss_pred CHHHHHHHHHhhCCCCCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cc-eeecchh
Confidence 44444444443344455678999998 7 99999999999885 67777 88888888877754321 00 1123443
Q ss_pred c--CcceEEEE--cCcC---Chh--hhhcCCCCceeecccccCcc-----CCC-CCceeecCCccc
Q 009674 413 A--HKTKIWLV--GDDL---TGK--EQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMI 463 (529)
Q Consensus 413 ~--~~~~vwiv--g~~~---~~~--~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~ 463 (529)
+ .+++++|. .... ++. ....+++|+.++|.+-+|+. +.| ..+.+..+..|-
T Consensus 77 ~~~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~~l~~~~~~~g~~~v~g~~~~ 142 (155)
T cd01065 77 ELLAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLETPLLKEARALGAKTIDGLEML 142 (155)
T ss_pred hccccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCCHHHHHHHHCCCceeCCHHHH
Confidence 2 56667662 1111 110 11235788888888766552 233 456665555553
No 26
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.58 E-value=0.012 Score=60.77 Aligned_cols=125 Identities=16% Similarity=0.189 Sum_probs=77.5
Q ss_pred HHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHH
Q 009674 295 EADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVA 372 (529)
Q Consensus 295 ~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~i~--~~~~~V~~~Gatg~~kig~ava 372 (529)
.|+++|++|+.+-..+. +. + .|. +.+ -..+.+.+++..+ -..++|.++|. | .+|+++|
T Consensus 108 ~a~~~gi~v~~~~~~~~---va------~-~n~----~~~---Ae~ai~~al~~~~~~l~gk~v~IiG~-G--~iG~avA 167 (287)
T TIGR02853 108 LAADAGVKLIELFERDD---VA------I-YNS----IPT---AEGAIMMAIEHTDFTIHGSNVMVLGF-G--RTGMTIA 167 (287)
T ss_pred HHHHCCCeEEEEEeccc---eE------E-Ecc----HhH---HHHHHHHHHHhcCCCCCCCEEEEEcC-h--HHHHHHH
Confidence 67788888887665321 21 1 110 000 1123334444432 24679999999 4 8999999
Q ss_pred HHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEc---CcCChhhhhcCCCCceeecccc
Q 009674 373 SSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG---DDLTGKEQARAPKGTIFIPYTQ 444 (529)
Q Consensus 373 ~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg---~~~~~~~q~~a~~G~~f~~~~~ 444 (529)
+.|...|.+|++ |+.++.+.+++. .... +...++++ ++++++|.- ..++.+...++++|++++|.+-
T Consensus 168 ~~L~~~G~~V~v~~R~~~~~~~~~~~-g~~~----~~~~~l~~~l~~aDiVint~P~~ii~~~~l~~~k~~aliIDlas 241 (287)
T TIGR02853 168 RTFSALGARVFVGARSSADLARITEM-GLIP----FPLNKLEEKVAEIDIVINTIPALVLTADVLSKLPKHAVIIDLAS 241 (287)
T ss_pred HHHHHCCCEEEEEeCCHHHHHHHHHC-CCee----ecHHHHHHHhccCCEEEECCChHHhCHHHHhcCCCCeEEEEeCc
Confidence 999999999998 777766655432 1110 11224443 566776632 2356777888999999999993
No 27
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.52 E-value=0.0033 Score=68.08 Aligned_cols=210 Identities=11% Similarity=0.111 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcC-----CCcEEEEe
Q 009674 285 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-----TTAHVLLR 359 (529)
Q Consensus 285 in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~i~~-----~~~~V~~~ 359 (529)
|=.+|-+|...|++.|.-=-- ||. |=.. .+.+.|.-. =+.++-.|..=.+.++++-..+ ..++|+|+
T Consensus 116 IlgQVK~A~~~A~~~g~~g~~---L~~---lf~~-A~~~aKrVr-teT~I~~~~vSv~~~Av~la~~~~~~l~~kkvlvi 187 (414)
T PRK13940 116 ILGQVKDSYTLSKKNHAIGKE---LDR---VFQK-VFATAKRVR-SETRIGHCPVSVAFSAITLAKRQLDNISSKNVLII 187 (414)
T ss_pred HHHHHHHHHHHHHHcCCchHH---HHH---HHHH-HHHHHHHHH-hccCCCCCCcCHHHHHHHHHHHHhcCccCCEEEEE
Confidence 444588899999888863211 222 1111 244445533 3356666665555555555433 45789999
Q ss_pred cccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcC-----cCChhh
Q 009674 360 GTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD-----DLTGKE 429 (529)
Q Consensus 360 Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~-----~~~~~~ 429 (529)
|+ | .+|+++|.+|+..|+ ++++ |+.++-++|.++.+... .+...++.+ .+++++|... .|+.++
T Consensus 188 Ga-G--~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~---~~~~~~l~~~l~~aDiVI~aT~a~~~vi~~~~ 261 (414)
T PRK13940 188 GA-G--QTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNAS---AHYLSELPQLIKKADIIIAAVNVLEYIVTCKY 261 (414)
T ss_pred cC-c--HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCe---EecHHHHHHHhccCCEEEECcCCCCeeECHHH
Confidence 99 5 899999999999986 4666 88899999998865311 111224433 5677877322 345544
Q ss_pred hhcCCCCceeecccccCcc-C--CC--CCceeecCCccccCCCCccccccccccCcchhHHHHHhhHhh----hhcCCCC
Q 009674 430 QARAPKGTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH----ALEGWDL 500 (529)
Q Consensus 430 q~~a~~G~~f~~~~~~~~~-~--~R--~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r~~~Ac~a~~~v~----alEgw~~ 500 (529)
.+ .+..+++|.+ +|+. + +. +++.+..-- +++. .++-.+..|...+=.|+.||- .++.|..
T Consensus 262 ~~--~~~~~~iDLa-vPRdidp~v~~l~~v~l~~iD------dl~~--i~~~n~~~R~~~~~~a~~iI~e~~~~f~~w~~ 330 (414)
T PRK13940 262 VG--DKPRVFIDIS-IPQALDPKLGELEQNVYYCVD------DINA--VIEDNKDKRKYESSKAQKIIVKSLEEYLEKEK 330 (414)
T ss_pred hC--CCCeEEEEeC-CCCCCCccccCcCCeEEEeHH------HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 3567999999 7766 2 21 222222111 1111 133345566666667777765 6777865
Q ss_pred C-ccch-h--h-hhHHHHHHHHHh
Q 009674 501 N-ECGQ-T--M-CDIHQVWHASLR 519 (529)
Q Consensus 501 ~-e~G~-i--v-~~id~i~~aa~k 519 (529)
. .+.. | + ++.++|-+..++
T Consensus 331 ~~~~~p~I~~lr~~~~~i~~~el~ 354 (414)
T PRK13940 331 AIISNSAIKELFQKADGLVDLSLE 354 (414)
T ss_pred hccchHHHHHHHHHHHHHHHHHHH
Confidence 5 5666 5 4 777777554443
No 28
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.38 E-value=0.0083 Score=62.01 Aligned_cols=139 Identities=21% Similarity=0.245 Sum_probs=88.9
Q ss_pred ecCChhHHHHHHhcCcCC--CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeec
Q 009674 335 VDGSSLAAAVVVNSLPKT--TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLST 409 (529)
Q Consensus 335 v~Gnsltaavv~~~i~~~--~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~ 409 (529)
|||-.+.-+-.=+.++.+ .++|++.||-| -++||+..|.+.|+ ++++ |+.+|.++|++..++... . ++..
T Consensus 106 TD~~G~~~~L~~~~~~~~~~~~~vlilGAGG---AarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-~-~~~~ 180 (283)
T COG0169 106 TDGIGFLRALKEFGLPVDVTGKRVLILGAGG---AARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-A-VEAA 180 (283)
T ss_pred CCHHHHHHHHHhcCCCcccCCCEEEEECCcH---HHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-c-cccc
Confidence 677776666655565544 48999999998 48999999999995 5777 999999999998665432 1 1122
Q ss_pred ---ccccC-cceEEE----EcCcCCh----hhhhcCCCCceeecccccCcc-----CCC-CCceeecCCccccCCCCccc
Q 009674 410 ---SYAAH-KTKIWL----VGDDLTG----KEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMIIPPSLSNM 471 (529)
Q Consensus 410 ---~~~~~-~~~vwi----vg~~~~~----~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~P~~~~~~ 471 (529)
+++.. +.+++| +|-.-.+ -+-.-.++++++.|+.=.|.+ ..| +=|.+.++..|-+- |+.
T Consensus 181 ~~~~~~~~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~~idGl~Mlv~---Qaa 257 (283)
T COG0169 181 ALADLEGLEEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAKTIDGLGMLVH---QAA 257 (283)
T ss_pred cccccccccccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCeEECcHHHHHH---HHH
Confidence 23223 467777 2221111 001234888888888855544 223 56778888777664 444
Q ss_pred cccccccCcc
Q 009674 472 HSCENWLGRR 481 (529)
Q Consensus 472 ~~~e~~~p~r 481 (529)
.++|-|.+.+
T Consensus 258 ~aF~lwtg~~ 267 (283)
T COG0169 258 EAFELWTGVE 267 (283)
T ss_pred HHHHHHhCCC
Confidence 4555555443
No 29
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.35 E-value=0.011 Score=66.62 Aligned_cols=59 Identities=19% Similarity=0.363 Sum_probs=48.7
Q ss_pred CChhHHHHHHhcCcC-----CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 337 GSSLAAAVVVNSLPK-----TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 337 Gnsltaavv~~~i~~-----~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
|.+.....+.+.+|+ +.+.|+|+||+| .||+++++.|+++|.+|.+ |+.++.+.+.+++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~gKvVLVTGATG--gIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l 124 (576)
T PLN03209 59 GATKFSSAAIEAIPKELDTKDEDLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSV 124 (576)
T ss_pred cchhhhhhhhhccccccccCCCCEEEEECCCC--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Confidence 556666777777875 356899999999 9999999999999999987 8988888776654
No 30
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.0091 Score=58.34 Aligned_cols=46 Identities=22% Similarity=0.255 Sum_probs=40.4
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 350 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
+...+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++++++
T Consensus 6 ~~~~k~ilItGasg--~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l 53 (258)
T PRK06949 6 NLEGKVALVTGASS--GLGARFAQVLAQAGAKVVLASRRVERLKELRAEI 53 (258)
T ss_pred CCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 34567899999998 9999999999999999988 8889988887765
No 31
>PRK09186 flagellin modification protein A; Provisional
Probab=96.27 E-value=0.0091 Score=58.28 Aligned_cols=45 Identities=18% Similarity=0.231 Sum_probs=39.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++..
T Consensus 4 ~k~vlItGas~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~ 50 (256)
T PRK09186 4 GKTILITGAGG--LIGSALVKAILEAGGIVIAADIDKEALNELLESLGK 50 (256)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHh
Confidence 46899999998 9999999999999999998 888888877776543
No 32
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.27 E-value=0.01 Score=56.62 Aligned_cols=88 Identities=19% Similarity=0.270 Sum_probs=61.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEE--Ec--CcC
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDL 425 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~ 425 (529)
.-++|+|+|-- ++|+.||+.|...|.+|++...|....||... .++ ++.++++ .+++++| -| +.|
T Consensus 22 ~Gk~vvV~GYG---~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-dGf-----~v~~~~~a~~~adi~vtaTG~~~vi 92 (162)
T PF00670_consen 22 AGKRVVVIGYG---KVGKGIARALRGLGARVTVTEIDPIRALQAAM-DGF-----EVMTLEEALRDADIFVTATGNKDVI 92 (162)
T ss_dssp TTSEEEEE--S---HHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-TT------EEE-HHHHTTT-SEEEE-SSSSSSB
T ss_pred CCCEEEEeCCC---cccHHHHHHHhhCCCEEEEEECChHHHHHhhh-cCc-----EecCHHHHHhhCCEEEECCCCcccc
Confidence 56789999987 99999999999999999996667777776663 333 2445553 5667766 34 568
Q ss_pred ChhhhhcCCCCceeecccccCcc
Q 009674 426 TGKEQARAPKGTIFIPYTQIPPR 448 (529)
Q Consensus 426 ~~~~q~~a~~G~~f~~~~~~~~~ 448 (529)
+.|+...+|.|++++....++-+
T Consensus 93 ~~e~~~~mkdgail~n~Gh~d~E 115 (162)
T PF00670_consen 93 TGEHFRQMKDGAILANAGHFDVE 115 (162)
T ss_dssp -HHHHHHS-TTEEEEESSSSTTS
T ss_pred CHHHHHHhcCCeEEeccCcCcee
Confidence 99999999999999998876655
No 33
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=96.26 E-value=0.026 Score=58.66 Aligned_cols=132 Identities=13% Similarity=0.045 Sum_probs=89.7
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcCcCCCcEEEEecccCchhhHHH
Q 009674 299 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSLPKTTAHVLLRGTVTANKVANA 370 (529)
Q Consensus 299 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i~~~~~~V~~~Gatg~~kig~a 370 (529)
.|+|+++-+ . |+-.++.+.-+|+ +.-..+.||+.+|+ |+..+-..++.+.+.++|+- ..|+.
T Consensus 62 ~g~K~~~~~---~----~~~~g~v~L~d~~TG~p~Almd~~~lT~~RTaA~salaa~~l~~da~~l~iiGaG---~QA~~ 131 (301)
T PRK06407 62 AGLKTYIAG---R----NGARFVVLLFDVNNPELVAIFEANRLGQIRTGAVTAYATSILHKNVENFTIIGSG---FQAET 131 (301)
T ss_pred eEEEEEecC---C----CCccEEEEEEECCCCCEEEEEccchHHHHHHHHHHHHHHHHhhcCCcEEEEECCc---HHHHH
Confidence 577776642 1 2222355555555 44589999999986 45556566788999999987 89999
Q ss_pred HHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE----EcCc-CChhhhhcCCCCcee
Q 009674 371 VASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VGDD-LTGKEQARAPKGTIF 439 (529)
Q Consensus 371 va~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg~~-~~~~~q~~a~~G~~f 439 (529)
-++++| +.-.+|.+ |++++.+++.+++....+..+.-+.+.++ ++++|++ ..+. ++.+ |.+||+|+
T Consensus 132 ~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~P~~~~~---~l~pg~hV 208 (301)
T PRK06407 132 QLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDTPIFNRK---YLGDEYHV 208 (301)
T ss_pred HHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCcEecHH---HcCCCceE
Confidence 999999 55555666 99999999988876544334223346664 7888877 2222 3444 34789998
Q ss_pred eccc
Q 009674 440 IPYT 443 (529)
Q Consensus 440 ~~~~ 443 (529)
..+-
T Consensus 209 ~aiG 212 (301)
T PRK06407 209 NLAG 212 (301)
T ss_pred EecC
Confidence 8873
No 34
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=96.24 E-value=0.022 Score=59.36 Aligned_cols=140 Identities=18% Similarity=0.101 Sum_probs=85.9
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 009674 298 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 368 (529)
Q Consensus 298 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig 368 (529)
-.|+|+++.--=|....+..-.++.+.-+++ +.-+-+.||+.+|+ |+..+-+ |++...+.++|+- ..|
T Consensus 64 ~~gvK~v~~~p~N~~~glP~~~g~i~L~D~~TG~p~ai~dg~~lT~~RTaA~sala~~~La~~~~~~l~viGaG---~QA 140 (313)
T PF02423_consen 64 VAGVKWVSVFPGNPKRGLPSIQGVILLFDPETGEPLAIMDGTWLTALRTAAVSALAARYLARPDARTLGVIGAG---VQA 140 (313)
T ss_dssp EEEEEEEEEETTCGGGTSSSEEEEEEEEETTT--EEEEEESHHHHHHHHHHHHHHHHHHHS-TT--EEEEE--S---HHH
T ss_pred EEEEEEEEecCCccccCCCceeEEEEEEECCCCCEEEEecccchhhhHHHHHHHHHHHHhCcCCCceEEEECCC---HHH
Confidence 5788888854434433333333455555544 34488999999984 3333333 6678899999987 999
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE----cC---cCChhhhhcCCC
Q 009674 369 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GD---DLTGKEQARAPK 435 (529)
Q Consensus 369 ~ava~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~---~~~~~~q~~a~~ 435 (529)
+.-+++|+ +.-.+|.+ |++++.+++.+++.. .+.....+.+.++ ++++|++. .+ .++.+ |.++
T Consensus 141 ~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~-~~~~v~~~~~~~~av~~aDii~taT~s~~~~P~~~~~---~l~~ 216 (313)
T PF02423_consen 141 RWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRD-LGVPVVAVDSAEEAVRGADIIVTATPSTTPAPVFDAE---WLKP 216 (313)
T ss_dssp HHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHC-CCTCEEEESSHHHHHTTSSEEEE----SSEEESB-GG---GS-T
T ss_pred HHHHHHHHHhCCceEEEEEccChhHHHHHHHhhcc-ccccceeccchhhhcccCCEEEEccCCCCCCccccHH---HcCC
Confidence 99999998 55445555 999999999999777 4445335557774 88888772 22 34444 4589
Q ss_pred Cceeecccc
Q 009674 436 GTIFIPYTQ 444 (529)
Q Consensus 436 G~~f~~~~~ 444 (529)
|+++..+.-
T Consensus 217 g~hi~~iGs 225 (313)
T PF02423_consen 217 GTHINAIGS 225 (313)
T ss_dssp T-EEEE-S-
T ss_pred CcEEEEecC
Confidence 999888875
No 35
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.21 E-value=0.014 Score=55.74 Aligned_cols=85 Identities=15% Similarity=0.142 Sum_probs=56.8
Q ss_pred hhHHHHHHhcCcC--CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccC
Q 009674 339 SLAAAVVVNSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAH 414 (529)
Q Consensus 339 sltaavv~~~i~~--~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~ 414 (529)
++++.-.++++.. ..++|+|+|+.. -+|..+|.+|.++|.+|++ |+.+ ++++.+ +
T Consensus 28 ~~a~v~l~~~~~~~l~gk~vlViG~G~--~~G~~~a~~L~~~g~~V~v~~r~~~---~l~~~l----------------~ 86 (168)
T cd01080 28 PAGILELLKRYGIDLAGKKVVVVGRSN--IVGKPLAALLLNRNATVTVCHSKTK---NLKEHT----------------K 86 (168)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEECCcH--HHHHHHHHHHhhCCCEEEEEECCch---hHHHHH----------------h
Confidence 4444445555543 689999999963 4699999999999999888 4322 222211 2
Q ss_pred cceEEE----EcCcCChhhhhcCCCCceeecccccCcc
Q 009674 415 KTKIWL----VGDDLTGKEQARAPKGTIFIPYTQIPPR 448 (529)
Q Consensus 415 ~~~vwi----vg~~~~~~~q~~a~~G~~f~~~~~~~~~ 448 (529)
+++++| ..+.+++++. ++|++++|++ +|+.
T Consensus 87 ~aDiVIsat~~~~ii~~~~~---~~~~viIDla-~prd 120 (168)
T cd01080 87 QADIVIVAVGKPGLVKGDMV---KPGAVVIDVG-INRV 120 (168)
T ss_pred hCCEEEEcCCCCceecHHHc---cCCeEEEEcc-CCCc
Confidence 344544 2235677655 7899999999 7775
No 36
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=96.19 E-value=0.05 Score=57.02 Aligned_cols=140 Identities=17% Similarity=0.153 Sum_probs=91.0
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 009674 298 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 368 (529)
Q Consensus 298 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig 368 (529)
-.|+|+++.--=|....|-.-.++.+.-+|. +.-+-+.||+.+|+ |++.+-+ +++.++|.++|+- ..|
T Consensus 64 ~~g~K~v~~~p~N~~~glp~~~g~i~L~d~~tG~p~ai~d~~~lT~~RTaA~salaa~~La~~~~~~lgiiG~G---~qA 140 (325)
T TIGR02371 64 MAGVKCVNVHPGNPDRHLPTVMALIILVSPETGFPIALMDGTYITDMRTGAAGGVAAKYLARKDSSVLGIIGAG---RQA 140 (325)
T ss_pred eEEEEEEeecCCchhcCCCcceEEEEEeeCCCCCeEEEEeCcchhhHHHHHHHHHHHHHhCCCCCCEEEEECCC---HHH
Confidence 4688888753333323333334456666655 45599999999985 2333545 5678899999987 899
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE-c---Cc-CChhhhhcCCCCc
Q 009674 369 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-G---DD-LTGKEQARAPKGT 437 (529)
Q Consensus 369 ~ava~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-g---~~-~~~~~q~~a~~G~ 437 (529)
++-+++|+ +...+|.+ |++++.+.+.+++.+ .+.....+.+.++ ++++|++. - +. ++++ +.+||+
T Consensus 141 ~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~-~g~~v~~~~~~~eav~~aDiVitaT~s~~P~~~~~---~l~~g~ 216 (325)
T TIGR02371 141 WTQLEALSRVFDLEEVSVYCRTPSTREKFALRASD-YEVPVRAATDPREAVEGCDILVTTTPSRKPVVKAD---WVSEGT 216 (325)
T ss_pred HHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHh-hCCcEEEeCCHHHHhccCCEEEEecCCCCcEecHH---HcCCCC
Confidence 99888877 66667777 999999998887642 2222112336664 78877662 1 22 2333 459999
Q ss_pred eeecccc
Q 009674 438 IFIPYTQ 444 (529)
Q Consensus 438 ~f~~~~~ 444 (529)
+++.+..
T Consensus 217 ~v~~vGs 223 (325)
T TIGR02371 217 HINAIGA 223 (325)
T ss_pred EEEecCC
Confidence 9998863
No 37
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.18 E-value=0.038 Score=57.35 Aligned_cols=139 Identities=12% Similarity=0.091 Sum_probs=91.3
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 009674 298 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 368 (529)
Q Consensus 298 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig 368 (529)
-.|+|+++.--=|..+.|..-.+..+.-+|+ +.-.-+.||+.+|+ |+..+-+ +++.++|.++|+- ..|
T Consensus 61 ~~g~K~~~~~p~N~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaA~sala~~~La~~~~~~v~IiGaG---~qa 137 (304)
T PRK07340 61 LAITKLVTVCPGNAARGLPTIQGEVVVADAATGERLFLLDGPTVTGRRTAAVSLLAARTLAPAPPGDLLLIGTG---VQA 137 (304)
T ss_pred ccEEEEEEeCCCCccCCCCcceEEEEEEECCCCcEEEEEcChhHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHH
Confidence 3588887743333323333334466666655 45599999999985 3445555 5678899999994 899
Q ss_pred HHHHHHHhc-cC-cEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE----EcCcCChhhhhcCCCCce
Q 009674 369 NAVASSLCQ-MG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VGDDLTGKEQARAPKGTI 438 (529)
Q Consensus 369 ~ava~~L~~-~~-~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg~~~~~~~q~~a~~G~~ 438 (529)
++.+++||. ++ .++.+ |++++.+++.+++... ... +...+.++ ++++|+| ..+.+=++ +.+||++
T Consensus 138 ~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~-~~~-~~~~~~~~av~~aDiVitaT~s~~Pl~~~---~~~~g~h 212 (304)
T PRK07340 138 RAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARAL-GPT-AEPLDGEAIPEAVDLVVTATTSRTPVYPE---AARAGRL 212 (304)
T ss_pred HHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhc-CCe-eEECCHHHHhhcCCEEEEccCCCCceeCc---cCCCCCE
Confidence 999999983 55 45666 9999999998887532 112 12345653 7788877 22222222 3489999
Q ss_pred eecccc
Q 009674 439 FIPYTQ 444 (529)
Q Consensus 439 f~~~~~ 444 (529)
+..+.-
T Consensus 213 i~~iGs 218 (304)
T PRK07340 213 VVAVGA 218 (304)
T ss_pred EEecCC
Confidence 988863
No 38
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.16 E-value=0.013 Score=60.09 Aligned_cols=61 Identities=16% Similarity=0.102 Sum_probs=43.3
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccCcceEEEEcCcCChhhhhc
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQAR 432 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~ 432 (529)
+|+|+|||| -||+.+++.|.++|.+|.. |+.++...++.. + ..++.||..+++++..
T Consensus 2 kIlVtGatG--~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~------------------~-v~~v~~Dl~d~~~l~~ 60 (317)
T CHL00194 2 SLLVIGATG--TLGRQIVRQALDEGYQVRCLVRNLRKASFLKEW------------------G-AELVYGDLSLPETLPP 60 (317)
T ss_pred EEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhc------------------C-CEEEECCCCCHHHHHH
Confidence 699999999 9999999999999999887 766554333211 1 1245666666666655
Q ss_pred CCCC
Q 009674 433 APKG 436 (529)
Q Consensus 433 a~~G 436 (529)
+-+|
T Consensus 61 al~g 64 (317)
T CHL00194 61 SFKG 64 (317)
T ss_pred HHCC
Confidence 5555
No 39
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.14 E-value=0.016 Score=59.70 Aligned_cols=127 Identities=15% Similarity=0.102 Sum_probs=73.6
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCcccccc-ceeeecc
Q 009674 335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQH-NLVLSTS 410 (529)
Q Consensus 335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~-~l~~~~~ 410 (529)
|||-....+.--.......++|++.|+- -.|+|+|..|++.|+ ++++ |+.++.++|.+++...... ......+
T Consensus 109 TD~~G~~~~l~~~~~~~~~k~vlIlGaG---Gaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~ 185 (284)
T PRK12549 109 TDWSGFAESFRRGLPDASLERVVQLGAG---GAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSD 185 (284)
T ss_pred CCHHHHHHHHHhhccCccCCEEEEECCc---HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccc
Confidence 5555555444211122345789999997 589999999999998 6777 8999999998876443211 1111123
Q ss_pred cc-c-CcceEEE----EcCcC---ChhhhhcCCCCceeecccccCcc-----CCC-CCceeecCCcccc
Q 009674 411 YA-A-HKTKIWL----VGDDL---TGKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII 464 (529)
Q Consensus 411 ~~-~-~~~~vwi----vg~~~---~~~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~ 464 (529)
+. + ++++++| +|-.- .|-+....+++..+.|++--|++ ..| +-|....+..|-+
T Consensus 186 ~~~~~~~aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~~~G~~~~~G~~ML~ 254 (284)
T PRK12549 186 LAAALAAADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPLETELLRAARALGCRTLDGGGMAV 254 (284)
T ss_pred hHhhhCCCCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeCCCCCHHHHHHHHCCCeEecCHHHHH
Confidence 33 2 5677777 33110 11122335677777777732322 112 4566666666644
No 40
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.12 E-value=0.018 Score=59.63 Aligned_cols=87 Identities=17% Similarity=0.213 Sum_probs=60.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--c-Cc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--G-DD 424 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g-~~ 424 (529)
..++|+++|+ | .+|++++..|.+.|.+|++ |+.++.+..++ .+... +...++++ ++++++|. . ..
T Consensus 151 ~g~kvlViG~-G--~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-~G~~~----~~~~~l~~~l~~aDiVI~t~p~~~ 222 (296)
T PRK08306 151 HGSNVLVLGF-G--RTGMTLARTLKALGANVTVGARKSAHLARITE-MGLSP----FHLSELAEEVGKIDIIFNTIPALV 222 (296)
T ss_pred CCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCee----ecHHHHHHHhCCCCEEEECCChhh
Confidence 4689999997 5 8999999999999999998 66666554432 32211 11223433 56677662 2 23
Q ss_pred CChhhhhcCCCCceeecccccCc
Q 009674 425 LTGKEQARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 425 ~~~~~q~~a~~G~~f~~~~~~~~ 447 (529)
++.+....+++|++++|++ ..|
T Consensus 223 i~~~~l~~~~~g~vIIDla-~~p 244 (296)
T PRK08306 223 LTKEVLSKMPPEALIIDLA-SKP 244 (296)
T ss_pred hhHHHHHcCCCCcEEEEEc-cCC
Confidence 6777778899999999999 444
No 41
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.09 E-value=0.012 Score=61.02 Aligned_cols=148 Identities=16% Similarity=0.205 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcC-----CCcEEEEe
Q 009674 285 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-----TTAHVLLR 359 (529)
Q Consensus 285 in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~i~~-----~~~~V~~~ 359 (529)
|=.++.+|...|++.|.-= ..||. |=.. -+.+.|.-. -+..+-.|..=++..+++...+ ..++|+++
T Consensus 113 IlgQvk~A~~~a~~~g~~~---~~L~~---lf~~-a~~~~k~vr-~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~Vi 184 (311)
T cd05213 113 ILGQVKNAYKLAKEAGTSG---KLLNR---LFQK-AIKVGKRVR-TETGISRGAVSISSAAVELAEKIFGNLKGKKVLVI 184 (311)
T ss_pred HHHHHHHHHHHHHHcCCch---HHHHH---HHHH-HHHHHHHHh-hhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEE
Confidence 3344889999999988621 12222 1111 133333322 2244444443333334444433 47889999
Q ss_pred cccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCcCC-h----hh
Q 009674 360 GTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLT-G----KE 429 (529)
Q Consensus 360 Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~-~----~~ 429 (529)
|+ | .+|+.+++.|+++| .+|++ |+.++.++++++++... +...++++ ..++++|.-..-. + ++
T Consensus 185 Ga-G--~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~----~~~~~~~~~l~~aDvVi~at~~~~~~~~~~~ 257 (311)
T cd05213 185 GA-G--EMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNA----VPLDELLELLNEADVVISATGAPHYAKIVER 257 (311)
T ss_pred Cc-H--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeE----EeHHHHHHHHhcCCEEEECCCCCchHHHHHH
Confidence 98 6 99999999999766 56666 88899999988876421 22224443 5677766322211 1 11
Q ss_pred hh-cC-CCCceeecccccCcc
Q 009674 430 QA-RA-PKGTIFIPYTQIPPR 448 (529)
Q Consensus 430 q~-~a-~~G~~f~~~~~~~~~ 448 (529)
.. .. .+|.+++|.+ +|+.
T Consensus 258 ~~~~~~~~~~~viDla-vPrd 277 (311)
T cd05213 258 AMKKRSGKPRLIVDLA-VPRD 277 (311)
T ss_pred HHhhCCCCCeEEEEeC-CCCC
Confidence 11 11 2578999998 6655
No 42
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.014 Score=58.02 Aligned_cols=43 Identities=21% Similarity=0.271 Sum_probs=38.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
++|+|+|++| -||+++|+.|+++|.+|.+ |++++.++++++.+
T Consensus 3 k~vlVtGasg--~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~ 47 (276)
T PRK06482 3 KTWFITGASS--GFGRGMTERLLARGDRVAATVRRPDALDDLKARYG 47 (276)
T ss_pred CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc
Confidence 5799999998 9999999999999999988 88888888877654
No 43
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.05 E-value=0.018 Score=59.31 Aligned_cols=62 Identities=16% Similarity=0.190 Sum_probs=43.8
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cch---hhHHHHHhhCcc
Q 009674 335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICK---DDYEKLKLRIPV 399 (529)
Q Consensus 335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~l--~~~---~~~~~l~~~~~~ 399 (529)
|||.-...+.--.......+.|+++|| | -+|+|+|..|.+.|.+ |.+ |+. ++.+++.+++..
T Consensus 108 TD~~G~~~~l~~~~~~~~~k~vlI~GA-G--GagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~ 175 (289)
T PRK12548 108 TDGLGFVRNLREHGVDVKGKKLTVIGA-G--GAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQ 175 (289)
T ss_pred cCHHHHHHHHHhcCCCcCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhh
Confidence 555555444432233334578999999 5 7999999999999987 877 775 678887777643
No 44
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.013 Score=57.63 Aligned_cols=45 Identities=29% Similarity=0.320 Sum_probs=39.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 8 ~~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~ 54 (253)
T PRK05867 8 HGKRALITGAST--GIGKRVALAYVEAGAQVAIAARHLDALEKLADEIG 54 (253)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence 457899999998 9999999999999999998 88888888877754
No 45
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.011 Score=58.89 Aligned_cols=45 Identities=16% Similarity=0.193 Sum_probs=39.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++++++++++..
T Consensus 8 ~k~~lItGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 54 (263)
T PRK08339 8 GKLAFTTASSK--GIGFGVARVLARAGADVILLSRNEENLKKAREKIKS 54 (263)
T ss_pred CCEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 45789999997 9999999999999999998 888898888777543
No 46
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.016 Score=57.49 Aligned_cols=44 Identities=25% Similarity=0.307 Sum_probs=39.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++.
T Consensus 6 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (261)
T PRK08265 6 GKVAIVTGGAT--LIGAAVARALVAAGARVAIVDIDADNGAAVAASLG 51 (261)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 46899999998 9999999999999999998 88888888877763
No 47
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.99 E-value=0.013 Score=56.87 Aligned_cols=42 Identities=21% Similarity=0.306 Sum_probs=35.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 397 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 397 (529)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 5 ~~vlItGa~g--~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~ 49 (250)
T PRK08063 5 KVALVTGSSR--GIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEI 49 (250)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 5799999998 9999999999999999765 7777777766654
No 48
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.96 E-value=0.033 Score=62.32 Aligned_cols=122 Identities=17% Similarity=0.216 Sum_probs=79.3
Q ss_pred HHHHHHcCCc--EEEecccccc------cccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcC-------------
Q 009674 293 ILEADAKGVK--VISLGLLNQG------EELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK------------- 351 (529)
Q Consensus 293 i~~A~k~G~k--v~~LG~ln~~------e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~i~~------------- 351 (529)
...+++.+++ +++...+++. +.+|..| +.+..-|+ +.. +++ . +.-++.|.-
T Consensus 170 ~~~v~~~~~~~iiiAips~~~~~~~~i~~~l~~~~-~~v~~lP~-~~~-l~~----~-~~~lreI~ieDLLgR~pV~~d~ 241 (588)
T COG1086 170 ERVVEELGIQLILIAIPSASQEERRRILLRLARTG-IAVRILPQ-LTD-LKD----L-NGQLREIEIEDLLGRPPVALDT 241 (588)
T ss_pred HHHHHHcCCceEEEecCCCCHHHHHHHHHHHHhcC-CcEEecCc-HHH-HHH----h-ccccccCCHHHHhCCCCCCCCH
Confidence 3456777777 7777777766 5677777 77777777 441 111 1 111444421
Q ss_pred -------CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeecccccCcceE-EE
Q 009674 352 -------TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKI-WL 420 (529)
Q Consensus 352 -------~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~v-wi 420 (529)
+.++|+++||+| +||+.+|+-+++.+.+.++ +++-.+..+++++.+..+ + .++ -+
T Consensus 242 ~~i~~~~~gK~vLVTGagG--SiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~-----------~~~~~~ 307 (588)
T COG1086 242 ELIGAMLTGKTVLVTGGGG--SIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-E-----------LKLRFY 307 (588)
T ss_pred HHHHhHcCCCEEEEeCCCC--cHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC-C-----------cceEEE
Confidence 378999999999 9999999999987877766 777777777777666442 1 122 44
Q ss_pred EcCcCChhhhhcCCCC
Q 009674 421 VGDDLTGKEQARAPKG 436 (529)
Q Consensus 421 vg~~~~~~~q~~a~~G 436 (529)
.||.-+.+-...+-.|
T Consensus 308 igdVrD~~~~~~~~~~ 323 (588)
T COG1086 308 IGDVRDRDRVERAMEG 323 (588)
T ss_pred ecccccHHHHHHHHhc
Confidence 5666666655544444
No 49
>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]
Probab=95.93 E-value=0.019 Score=59.87 Aligned_cols=151 Identities=17% Similarity=0.194 Sum_probs=108.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEE----EcCcCC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VGDDLT 426 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg~~~~ 426 (529)
-+.++++|-. ++|.-||.+|--.|-+|.+..-|..-.||.... ++ +++.+++ +..+|.| --|+|+
T Consensus 214 GKv~Vv~GYG---dVGKgCaqaLkg~g~~VivTEiDPI~ALQAaMe-G~-----~V~tm~ea~~e~difVTtTGc~dii~ 284 (434)
T KOG1370|consen 214 GKVAVVCGYG---DVGKGCAQALKGFGARVIVTEIDPICALQAAME-GY-----EVTTLEEAIREVDIFVTTTGCKDIIT 284 (434)
T ss_pred ccEEEEeccC---ccchhHHHHHhhcCcEEEEeccCchHHHHHHhh-cc-----EeeeHHHhhhcCCEEEEccCCcchhh
Confidence 4455666654 999999999999999999977788888877632 22 3777775 6777877 347889
Q ss_pred hhhhhcCCCCceeecccccCcc----CCCCC-------------ceeecCCcccc--CCCCccccccccccCcchhHHHH
Q 009674 427 GKEQARAPKGTIFIPYTQIPPR----KLRKD-------------CFYHSTPAMII--PPSLSNMHSCENWLGRRVMSAWR 487 (529)
Q Consensus 427 ~~~q~~a~~G~~f~~~~~~~~~----~~R~d-------------c~y~~~~a~~~--P~~~~~~~~~e~~~p~r~~~Ac~ 487 (529)
.+...+||.++++|-.-.|+-+ -+|.+ ...+++-.+.+ -+-+-|+. |-.+.|.=+||-.+
T Consensus 285 ~~H~~~mk~d~IvCN~Ghfd~EiDv~~L~~~~~~~~~vk~QvD~~~~~~gr~iIlLAeGRLvNL~-CatghpSFvmS~sf 363 (434)
T KOG1370|consen 285 GEHFDQMKNDAIVCNIGHFDTEIDVKWLNTPALTWENVKPQVDRYILPNGKHIILLAEGRLVNLG-CATGHPSFVMSNSF 363 (434)
T ss_pred HHHHHhCcCCcEEeccccccceeehhhccCCcceeeecccccceeeccCCcEEEEEecCceeecc-cccCCCceEEecch
Confidence 9999999999999988775544 22211 11222222221 12366787 99999999999999
Q ss_pred HhhHhhhhcCCCCCc----cch-h-hhhHHHH
Q 009674 488 IAGIIHALEGWDLNE----CGQ-T-MCDIHQV 513 (529)
Q Consensus 488 a~~~v~alEgw~~~e----~G~-i-v~~id~i 513 (529)
.--++.-+|=|++.+ .|- + ..++|+-
T Consensus 364 tnQvlAqIeLwt~p~~kY~~~V~~LPKklDE~ 395 (434)
T KOG1370|consen 364 TNQVLAQIELWTAPEGKYKVGVYVLPKKLDEY 395 (434)
T ss_pred HHHHHHHHHHhcCCCCccccceEecchhhHHH
Confidence 999999999999885 343 3 4788764
No 50
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.86 E-value=0.019 Score=56.34 Aligned_cols=45 Identities=20% Similarity=0.213 Sum_probs=38.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
..++|+++|++| .||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 9 ~~k~vlItGa~g--~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~ 55 (255)
T PRK07523 9 TGRRALVTGSSQ--GIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLK 55 (255)
T ss_pred CCCEEEEECCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 356899999998 9999999999999999998 88888777766653
No 51
>PF10520 Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro: IPR019547 This entry represents part of the transcript of the fusion of two genes, the UEV1. UEV1 is an enzymatically inactive variant of the E2 ubiquitin-conjugating enzymes that regulate non-canonical elongation of ubiquitin chains, and Kua, an otherwise unknown gene. UEV1A is a nuclear protein, whereas both Kua and Kua-UEV localise to cytoplasmic structures, indicating that the addition of a Kua domain to UEV confers new biological properties. UEV1-Kua carries the B domain with its characteristic double histidine motif, and it is probably this domain which determines the cytoplasmic localisation. It is postulated that this hybrid transcript could preferentially direct the variant polyubiquitination of substrates closely associated with the cytoplasmic face of the endoplasmic reticulum, possibly, although not necessarily, in conjunction with membrane-bound ubiquitin-conjugating enzymes [].
Probab=95.86 E-value=0.014 Score=56.55 Aligned_cols=56 Identities=18% Similarity=0.349 Sum_probs=41.1
Q ss_pred HHHHHHhcccceeeccccc--ccccCcchhcccChhhhhhhhcC-CCCCccCCcchhhhhcCCC
Q 009674 104 VDFMNNMGHCNFEFIPMWL--FTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTI 164 (529)
Q Consensus 104 ~~~~~~l~Hsn~e~~P~~~--f~~lp~L~yli~tP~~H~lHH~~-~~~NYG~~~~lWDrLFGT~ 164 (529)
......+.|.... .|.+. .++.+ ++.+|+.|..||.. +++|||....+|+.+....
T Consensus 98 tnq~HkWsH~~~~-~P~~V~~LQ~~g----illsr~~H~~HH~aPh~~~YCI~tGw~N~~Ld~~ 156 (178)
T PF10520_consen 98 TNQFHKWSHTYKS-LPPWVRFLQDAG----ILLSRKHHRIHHVAPHDTNYCITTGWLNPPLDKI 156 (178)
T ss_pred HHHHHHHHcCCCC-CCHHHHHHHHCC----cccCchhhhccccCcccCCeEeecccchHHHHHh
Confidence 3444567888665 46541 12223 56799999999999 9999999999999987654
No 52
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.017 Score=55.99 Aligned_cols=44 Identities=20% Similarity=0.341 Sum_probs=37.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.++++|++| .||+++|+.|+++|.+|.+ |++++.+.+.+++.
T Consensus 6 ~k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (241)
T PRK07454 6 MPRALITGASS--GIGKATALAFAKAGWDLALVARSQDALEALAAELR 51 (241)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 88888777766643
No 53
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.84 E-value=0.068 Score=55.69 Aligned_cols=137 Identities=21% Similarity=0.195 Sum_probs=86.5
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 009674 299 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 369 (529)
Q Consensus 299 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig~ 369 (529)
.|+|+++.--=|....+-.--++.+.-+++ +.-+-+.||+.+|+ |+..+-+ +++.++|.++|+ | ..|+
T Consensus 62 ~g~K~~~~~p~N~~~glp~~~g~v~l~d~~tG~p~ai~d~~~lT~~RTaa~sala~~~La~~~~~~v~iiG~-G--~~a~ 138 (314)
T PRK06141 62 IGVKAVTVFPGNPARGLPGLHSTYLLFDGRTGEPLALVDGTELTARRTAAASALAASYLARKDASRLLVVGT-G--RLAS 138 (314)
T ss_pred eEEEEEeecCCCCcCCCCceEEEEEEEECCCCCEEEEEcCcchhcchhHHHHHHHHHHhCCCCCceEEEECC-c--HHHH
Confidence 589988843323222222222355666665 35599999999984 2333333 567889999996 5 9999
Q ss_pred HHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeee-ccccc--CcceEEEE----cCc-CChhhhhcCCCCc
Q 009674 370 AVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLS-TSYAA--HKTKIWLV----GDD-LTGKEQARAPKGT 437 (529)
Q Consensus 370 ava~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~-~~~~~--~~~~vwiv----g~~-~~~~~q~~a~~G~ 437 (529)
.++++|+ +...+|.+ |++++.+++.+++... +.. +.+ .+.++ ++++|++. .+. ++. .+.++|+
T Consensus 139 ~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~-g~~-~~~~~~~~~av~~aDIVi~aT~s~~pvl~~---~~l~~g~ 213 (314)
T PRK06141 139 LLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQ-GFD-AEVVTDLEAAVRQADIISCATLSTEPLVRG---EWLKPGT 213 (314)
T ss_pred HHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhc-CCc-eEEeCCHHHHHhcCCEEEEeeCCCCCEecH---HHcCCCC
Confidence 9999888 44466777 9999999998886432 112 222 35553 67777662 111 333 3458999
Q ss_pred eeeccc
Q 009674 438 IFIPYT 443 (529)
Q Consensus 438 ~f~~~~ 443 (529)
++..+.
T Consensus 214 ~i~~ig 219 (314)
T PRK06141 214 HLDLVG 219 (314)
T ss_pred EEEeeC
Confidence 766554
No 54
>PRK06196 oxidoreductase; Provisional
Probab=95.80 E-value=0.018 Score=58.95 Aligned_cols=56 Identities=16% Similarity=0.126 Sum_probs=45.7
Q ss_pred HHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 341 AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 341 taavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
++..+++.++...+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 14 ~~~~~~~~~~l~~k~vlITGasg--gIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~ 71 (315)
T PRK06196 14 TAEEVLAGHDLSGKTAIVTGGYS--GLGLETTRALAQAGAHVIVPARRPDVAREALAGID 71 (315)
T ss_pred cHHHHhcCCCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh
Confidence 35555666665567899999998 9999999999999999998 88888887766653
No 55
>PRK06924 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.021 Score=55.67 Aligned_cols=41 Identities=24% Similarity=0.372 Sum_probs=34.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLR 396 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~ 396 (529)
+.|+++|++| -||+++|+.|+++|.+|++ |++ ++++++.++
T Consensus 2 k~vlItGasg--giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~ 45 (251)
T PRK06924 2 RYVIITGTSQ--GLGEAIANQLLEKGTHVISISRTENKELTKLAEQ 45 (251)
T ss_pred cEEEEecCCc--hHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc
Confidence 4799999998 9999999999999999988 655 566655544
No 56
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.75 E-value=0.02 Score=55.66 Aligned_cols=42 Identities=17% Similarity=0.249 Sum_probs=37.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
+.|+++|++| .||+++|+.|.++|.+|.+ |++++.+++++++
T Consensus 5 ~~vlItG~sg--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~ 48 (258)
T PRK12429 5 KVALVTGAAS--GIGLEIALALAKEGAKVVIADLNDEAAAAAAEAL 48 (258)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 6899999998 9999999999999999988 8888888777665
No 57
>PRK06046 alanine dehydrogenase; Validated
Probab=95.74 E-value=0.085 Score=55.24 Aligned_cols=141 Identities=16% Similarity=0.196 Sum_probs=88.8
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 009674 298 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 368 (529)
Q Consensus 298 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig 368 (529)
..|+|+++.--=|..+.+..-.++.+.-+++ +.-..+.||+.+|+ |++.+-+ +++.+.|.++|+- ..|
T Consensus 65 ~~g~K~~~~~p~N~~~glp~~~g~i~L~d~~tG~p~aild~~~lT~~RTaA~sala~~~La~~~~~~vgiiG~G---~qa 141 (326)
T PRK06046 65 IAGVKIVNVHPGNPDRGLPTVMAVIILNSPETGFPLAIMDGTYLTDMRTGAAGGVAAKYLARKDSKVVGIIGAG---NQA 141 (326)
T ss_pred eEEEEEEeeCCCCcccCCCceeEEEEEEeCCCCceEEEEcCccHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHH
Confidence 4678888754334333333322355555544 35589999999985 2333555 6688899999987 789
Q ss_pred HHHHHHHh-ccCcEEEe---cchhhHHHHHhhCccccccceeeeccccc-CcceEEEEcC-----cCChhhhhcCCCCce
Q 009674 369 NAVASSLC-QMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLVGD-----DLTGKEQARAPKGTI 438 (529)
Q Consensus 369 ~ava~~L~-~~~~~v~l---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwivg~-----~~~~~~q~~a~~G~~ 438 (529)
++.++.|+ .++++... |++++.+++++++.+..........++++ ..+++++.-. .++.+ +.++|++
T Consensus 142 ~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~aDiVv~aTps~~P~~~~~---~l~~g~h 218 (326)
T PRK06046 142 RTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACDCDILVTTTPSRKPVVKAE---WIKEGTH 218 (326)
T ss_pred HHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhhCCEEEEecCCCCcEecHH---HcCCCCE
Confidence 99999998 44555544 89999999888865433322112336664 2277755211 12333 4589999
Q ss_pred eecccc
Q 009674 439 FIPYTQ 444 (529)
Q Consensus 439 f~~~~~ 444 (529)
+..+.-
T Consensus 219 V~~iGs 224 (326)
T PRK06046 219 INAIGA 224 (326)
T ss_pred EEecCC
Confidence 988763
No 58
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=95.72 E-value=0.028 Score=60.90 Aligned_cols=152 Identities=19% Similarity=0.200 Sum_probs=92.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE-----
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----- 421 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----- 421 (529)
..++|+++|+ | .+|+.++++|.+.| .+|++ |+.++.+++.++++... +...++.+ ..++++|.
T Consensus 179 ~~~~VlViGa-G--~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~----i~~~~l~~~l~~aDvVi~aT~s~ 251 (417)
T TIGR01035 179 KGKKALLIGA-G--EMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA----VKFEDLEEYLAEADIVISSTGAP 251 (417)
T ss_pred cCCEEEEECC-h--HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE----eeHHHHHHHHhhCCEEEECCCCC
Confidence 4578999998 7 99999999999989 56777 88888888888765421 11224433 56677662
Q ss_pred cCcCChhhhhcCC----CCceeecccccCcc-C--C--CCCceeecCCccccCCCCccccccccccCcchhHHHHHhhHh
Q 009674 422 GDDLTGKEQARAP----KGTIFIPYTQIPPR-K--L--RKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGII 492 (529)
Q Consensus 422 g~~~~~~~q~~a~----~G~~f~~~~~~~~~-~--~--R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r~~~Ac~a~~~v 492 (529)
.-.+++++...+. ++.+++|.+ +|+. . . -+++.+. .-++++.+ ++-....|.-.+=.|+.||
T Consensus 252 ~~ii~~e~l~~~~~~~~~~~~viDla-~Prdid~~v~~l~~v~l~------~vDdl~~~--~~~n~~~r~~~~~~a~~ii 322 (417)
T TIGR01035 252 HPIVSKEDVERALRERTRPLFIIDIA-VPRDVDPAVARLEGVFLY------DVDDLQPV--VEENLAERREEAEKAEEIV 322 (417)
T ss_pred CceEcHHHHHHHHhcCCCCeEEEEeC-CCCCCChhhcCcCCeEEE------EHHHHHHH--HHHhHHHHHHHHHHHHHHH
Confidence 2235666665442 356889998 6554 1 1 1222211 11122211 3334555666667888887
Q ss_pred h----hhcCCCCC-ccch-h--h-hhHHHHHHHHHh
Q 009674 493 H----ALEGWDLN-ECGQ-T--M-CDIHQVWHASLR 519 (529)
Q Consensus 493 ~----alEgw~~~-e~G~-i--v-~~id~i~~aa~k 519 (529)
- +|+.|... ..-. | + +++++|-+.-++
T Consensus 323 ~~~~~~f~~w~~~~~~~p~I~~lr~~~~~i~~~el~ 358 (417)
T TIGR01035 323 EEETAEFKQWLRSLEVEPTIKALRSLAEIVREKELE 358 (417)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 6 77777655 5555 4 3 666666544433
No 59
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.021 Score=56.03 Aligned_cols=44 Identities=18% Similarity=0.289 Sum_probs=38.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 6 ~k~~lItGas~--giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 51 (254)
T PRK07478 6 GKVAIITGASS--GIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIR 51 (254)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 35799999998 9999999999999999998 88888888877653
No 60
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.70 E-value=0.014 Score=63.34 Aligned_cols=89 Identities=21% Similarity=0.272 Sum_probs=68.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEc----
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG---- 422 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg---- 422 (529)
..++|+++||. ++|.-+|.+|+++|++.++ |+.+|-++|.++++.+. +...++.+ .++||+|.+
T Consensus 177 ~~~~vlvIGAG---em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~----~~l~el~~~l~~~DvVissTsa~ 249 (414)
T COG0373 177 KDKKVLVIGAG---EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA----VALEELLEALAEADVVISSTSAP 249 (414)
T ss_pred ccCeEEEEccc---HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee----ecHHHHHHhhhhCCEEEEecCCC
Confidence 68899999998 9999999999999966555 99999999999988333 22335554 677888844
Q ss_pred -CcCChhhhhcC---CCCceeecccccCcc
Q 009674 423 -DDLTGKEQARA---PKGTIFIPYTQIPPR 448 (529)
Q Consensus 423 -~~~~~~~q~~a---~~G~~f~~~~~~~~~ 448 (529)
-+|+.++...+ +++.+++|++ +|+.
T Consensus 250 ~~ii~~~~ve~a~~~r~~~livDia-vPRd 278 (414)
T COG0373 250 HPIITREMVERALKIRKRLLIVDIA-VPRD 278 (414)
T ss_pred ccccCHHHHHHHHhcccCeEEEEec-CCCC
Confidence 34666665554 4447899999 8887
No 61
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.69 E-value=0.0071 Score=56.71 Aligned_cols=102 Identities=25% Similarity=0.311 Sum_probs=66.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--E------
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--V------ 421 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--v------ 421 (529)
++|-++|- | .+|+++|+.|.+.|.+|.. |++++.++++++- .. ...+.++ +.+++++ +
T Consensus 2 ~~Ig~IGl-G--~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g-~~------~~~s~~e~~~~~dvvi~~v~~~~~v 71 (163)
T PF03446_consen 2 MKIGFIGL-G--NMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAG-AE------VADSPAEAAEQADVVILCVPDDDAV 71 (163)
T ss_dssp BEEEEE---S--HHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTT-EE------EESSHHHHHHHBSEEEE-SSSHHHH
T ss_pred CEEEEEch-H--HHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhh-hh------hhhhhhhHhhcccceEeecccchhh
Confidence 47889998 4 9999999999999999999 8899999988772 11 1224553 4555544 2
Q ss_pred cCcCChhh-hhcCCCCceeecccccCcc-------CCC-CCceeecCCccccC
Q 009674 422 GDDLTGKE-QARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIP 465 (529)
Q Consensus 422 g~~~~~~~-q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P 465 (529)
.+.+..++ ...+++|++|++.+-.+|+ .++ +.+.|.+.|.+--|
T Consensus 72 ~~v~~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapV~Gg~ 124 (163)
T PF03446_consen 72 EAVLFGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYVDAPVSGGP 124 (163)
T ss_dssp HHHHHCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEEEEEEESHH
T ss_pred hhhhhhhHHhhccccceEEEecCCcchhhhhhhhhhhhhccceeeeeeeeccc
Confidence 12222211 2346899999999998887 222 67889888876544
No 62
>PRK07326 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.024 Score=54.63 Aligned_cols=45 Identities=22% Similarity=0.240 Sum_probs=38.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
.+.|+++|++| .||+++|+.|.++|.+|.+ |+.++.+++.+++..
T Consensus 6 ~~~ilItGatg--~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~ 52 (237)
T PRK07326 6 GKVALITGGSK--GIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN 52 (237)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhc
Confidence 36799999998 9999999999999999988 888888877776543
No 63
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.024 Score=55.73 Aligned_cols=43 Identities=16% Similarity=0.299 Sum_probs=38.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
+.|+++|++| -||+++|+.|+++|.+|.+ |++++.++++++++
T Consensus 2 k~vlItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 46 (260)
T PRK08267 2 KSIFITGAAS--GIGRATALLFAAEGWRVGAYDINEAGLAALAAELG 46 (260)
T ss_pred cEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Confidence 5799999998 9999999999999999998 88999988877765
No 64
>PRK06823 ornithine cyclodeaminase; Validated
Probab=95.68 E-value=0.11 Score=54.48 Aligned_cols=138 Identities=17% Similarity=0.085 Sum_probs=88.8
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-Ccceeee-cCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 009674 299 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVV-DGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 368 (529)
Q Consensus 299 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv-~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig 368 (529)
.|+|+++.--=|....+-.-.++.+.-+|. +.-+.+. ||+.+|+ |+..+-+ +++.+++.++|+- ..|
T Consensus 64 ~g~K~v~~~p~N~~~glP~~~g~v~l~d~~TG~p~Ail~d~~~lT~~RTaA~sala~~~La~~d~~~l~iiG~G---~qA 140 (315)
T PRK06823 64 FVVKVSTGFYDNPAQGLPSNQGLMLAFSAKTGEPQALLLDEGWLTALRTALAGRIVARLLAPQHVSAIGIVGTG---IQA 140 (315)
T ss_pred EEEEEEeecCCCccCCCCCeeEEEEEEECCCCceEEEEcCCChHHHHHHHHHHHHHHHHhcCCCCCEEEEECCc---HHH
Confidence 677777643323322232223355555655 3346675 9999985 3334444 6788999999987 899
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE----cCc-CChhhhhcCCCCc
Q 009674 369 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GDD-LTGKEQARAPKGT 437 (529)
Q Consensus 369 ~ava~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~~-~~~~~q~~a~~G~ 437 (529)
+.-++++| +.-.+|.+ |++++.+++++++.+. +....-+.+.++ ++++|++. .+. ++.+ |.++|+
T Consensus 141 ~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~-~~~v~~~~~~~~av~~ADIV~taT~s~~P~~~~~---~l~~G~ 216 (315)
T PRK06823 141 RMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQAL-GFAVNTTLDAAEVAHAANLIVTTTPSREPLLQAE---DIQPGT 216 (315)
T ss_pred HHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhc-CCcEEEECCHHHHhcCCCEEEEecCCCCceeCHH---HcCCCc
Confidence 99999999 66667777 9999999988776432 233112336664 78888772 222 3344 448999
Q ss_pred eeeccc
Q 009674 438 IFIPYT 443 (529)
Q Consensus 438 ~f~~~~ 443 (529)
++..+.
T Consensus 217 hi~~iG 222 (315)
T PRK06823 217 HITAVG 222 (315)
T ss_pred EEEecC
Confidence 998886
No 65
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.65 E-value=0.021 Score=55.45 Aligned_cols=42 Identities=19% Similarity=0.241 Sum_probs=36.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 2 ~~vlItGa~g--~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 45 (255)
T TIGR01963 2 KTALVTGAAS--GIGLAIALALAAAGANVVVNDLGEAGAEAAAKVA 45 (255)
T ss_pred CEEEEcCCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4699999998 9999999999999999988 8888887777664
No 66
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=95.65 E-value=0.058 Score=57.63 Aligned_cols=92 Identities=14% Similarity=0.169 Sum_probs=66.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE-----cC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-----GD 423 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-----g~ 423 (529)
.++|+|+|+ | .+|+.+|+.|.+.|.+|.+ ++.++.+.++++.+........+..++++ +.+|++|- |+
T Consensus 167 ~~~VlViGa-G--~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~ 243 (370)
T TIGR00518 167 PGDVTIIGG-G--VVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA 243 (370)
T ss_pred CceEEEEcC-C--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence 345999999 6 9999999999999999888 78888888877654321101001113332 56677663 32
Q ss_pred ----cCChhhhhcCCCCceeecccccCcc
Q 009674 424 ----DLTGKEQARAPKGTIFIPYTQIPPR 448 (529)
Q Consensus 424 ----~~~~~~q~~a~~G~~f~~~~~~~~~ 448 (529)
.++.+..+++++|.+++|++ +++-
T Consensus 244 ~~p~lit~~~l~~mk~g~vIvDva-~d~G 271 (370)
T TIGR00518 244 KAPKLVSNSLVAQMKPGAVIVDVA-IDQG 271 (370)
T ss_pred CCCcCcCHHHHhcCCCCCEEEEEe-cCCC
Confidence 26889999999999999999 7776
No 67
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.63 E-value=0.027 Score=55.28 Aligned_cols=44 Identities=25% Similarity=0.258 Sum_probs=39.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 6 ~~~vlItGas~--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 51 (257)
T PRK07067 6 GKVALLTGAAS--GIGEAVAERYLAEGARVVIADIKPARARLAALEIG 51 (257)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC
Confidence 45799999998 9999999999999999988 88888888877754
No 68
>PRK08643 acetoin reductase; Validated
Probab=95.60 E-value=0.025 Score=55.39 Aligned_cols=43 Identities=21% Similarity=0.264 Sum_probs=37.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++++++.
T Consensus 3 k~~lItGas~--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 47 (256)
T PRK08643 3 KVALVTGAGQ--GIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLS 47 (256)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 5789999998 9999999999999999988 88888888877754
No 69
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.59 E-value=0.03 Score=55.24 Aligned_cols=44 Identities=18% Similarity=0.279 Sum_probs=39.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.|+|+|++| -||+++|+.|.++|.+|.+ |++++.+++.++++
T Consensus 6 ~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (263)
T PRK06200 6 GQVALITGGGS--GIGRALVERFLAEGARVAVLERSAEKLASLRQRFG 51 (263)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 35799999997 9999999999999999988 88899998887764
No 70
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.59 E-value=0.015 Score=60.39 Aligned_cols=45 Identities=16% Similarity=0.248 Sum_probs=40.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
.+.|+++||+| -||+++|+.|+++|.+|.+ |++++++++++++..
T Consensus 53 g~~~lITGAs~--GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~ 99 (320)
T PLN02780 53 GSWALVTGPTD--GIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQS 99 (320)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
Confidence 36789999997 9999999999999999998 999999998887643
No 71
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.023 Score=55.50 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=38.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 5 ~k~vlItGa~~--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 50 (258)
T PRK07890 5 GKVVVVSGVGP--GLGRTLAVRAARAGADVVLAARTAERLDEVAAEID 50 (258)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 36799999998 9999999999999999998 88888888877654
No 72
>PRK06194 hypothetical protein; Provisional
Probab=95.57 E-value=0.025 Score=56.54 Aligned_cols=43 Identities=14% Similarity=0.251 Sum_probs=37.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
+.|+|+|++| -||+++|+.|+++|.+|.+ |+.++++++.+++.
T Consensus 7 k~vlVtGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (287)
T PRK06194 7 KVAVITGAAS--GFGLAFARIGAALGMKLVLADVQQDALDRAVAELR 51 (287)
T ss_pred CEEEEeCCcc--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Confidence 5799999998 9999999999999999988 77777777766643
No 73
>PRK07109 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.024 Score=59.03 Aligned_cols=45 Identities=24% Similarity=0.313 Sum_probs=39.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
..+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++++++.
T Consensus 7 ~~k~vlITGas~--gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~ 53 (334)
T PRK07109 7 GRQVVVITGASA--GVGRATARAFARRGAKVVLLARGEEGLEALAAEIR 53 (334)
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 346899999998 9999999999999999988 88899888877753
No 74
>PRK07589 ornithine cyclodeaminase; Validated
Probab=95.55 E-value=0.093 Score=55.77 Aligned_cols=139 Identities=14% Similarity=0.005 Sum_probs=91.7
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 009674 298 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 368 (529)
Q Consensus 298 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig 368 (529)
-.|+|+++.=-=|....+-.--+..+.-+++ +.-+-+.||+.+|+ |+..+-+ +++.+++.++|+- ..|
T Consensus 65 ~~gvK~v~~~p~N~~~glP~i~g~v~L~D~~TG~p~Alldg~~lT~~RTaA~sala~~~Lar~da~~l~iiGaG---~QA 141 (346)
T PRK07589 65 LYSFKYVNGHPKNTRRGLQTVMAFGVLADVDTGYPLLLSEMTLLTALRTAATSALAAKYLARPDSRTMALIGNG---AQS 141 (346)
T ss_pred ceEEEEEeeCCCccccCCCceeEEEEEEECCCCCEEEEEcCccHHHHHHHHHHHHHHHHhccCCCcEEEEECCc---HHH
Confidence 3678887643324333343333445555554 35589999999984 3344555 6788899999987 899
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcC-------cCChhhhhcCCC
Q 009674 369 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD-------DLTGKEQARAPK 435 (529)
Q Consensus 369 ~ava~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~-------~~~~~~q~~a~~ 435 (529)
+.-++++| +.-.+|.+ |++++.+++.+++... +.+..-+.+.++ ++++|++-=. .++. +|.++
T Consensus 142 ~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~-~~~v~~~~~~~~av~~ADIIvtaT~S~~~~Pvl~~---~~lkp 217 (346)
T PRK07589 142 EFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGP-GLRIVACRSVAEAVEGADIITTVTADKTNATILTD---DMVEP 217 (346)
T ss_pred HHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhc-CCcEEEeCCHHHHHhcCCEEEEecCCCCCCceecH---HHcCC
Confidence 99999888 66666666 9999999998887542 223222346664 7888877311 1333 35599
Q ss_pred Cceeeccc
Q 009674 436 GTIFIPYT 443 (529)
Q Consensus 436 G~~f~~~~ 443 (529)
|+++..+-
T Consensus 218 G~hV~aIG 225 (346)
T PRK07589 218 GMHINAVG 225 (346)
T ss_pred CcEEEecC
Confidence 99988764
No 75
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.54 E-value=0.033 Score=53.95 Aligned_cols=44 Identities=14% Similarity=0.273 Sum_probs=38.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.|+++|++| -||+++|+.|.++|.+|++ |+.++.+.+.+++.
T Consensus 5 ~~~vlItGasg--~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 50 (251)
T PRK07231 5 GKVAIVTGASS--GIGEGIARRFAAEGARVVVTDRNEEAAERVAAEIL 50 (251)
T ss_pred CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 35899999998 9999999999999999988 88888887776654
No 76
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.036 Score=55.42 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=37.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
.+.|+|+|++| -||+++|+.|.++|.+|.+ |+.++.+.+++..
T Consensus 4 ~~~vlVtGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~ 48 (277)
T PRK06180 4 MKTWLITGVSS--GFGRALAQAALAAGHRVVGTVRSEAARADFEALH 48 (277)
T ss_pred CCEEEEecCCC--hHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc
Confidence 35799999998 9999999999999999998 8888888877653
No 77
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.44 E-value=0.034 Score=54.49 Aligned_cols=45 Identities=16% Similarity=0.316 Sum_probs=38.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
..+.++++|++| .||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 8 ~~k~~lItGas~--giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~ 54 (254)
T PRK08085 8 AGKNILITGSAQ--GIGFLLATGLAEYGAEIIINDITAERAELAVAKLR 54 (254)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHH
Confidence 456899999998 9999999999999999999 88888887776654
No 78
>PRK05717 oxidoreductase; Validated
Probab=95.42 E-value=0.044 Score=53.85 Aligned_cols=45 Identities=16% Similarity=0.195 Sum_probs=37.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
..+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 9 ~~k~vlItG~sg--~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 55 (255)
T PRK05717 9 NGRVALVTGAAR--GIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG 55 (255)
T ss_pred CCCEEEEeCCcc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcC
Confidence 456899999998 9999999999999999988 77777777665543
No 79
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=95.41 E-value=0.023 Score=61.05 Aligned_cols=138 Identities=13% Similarity=0.092 Sum_probs=75.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHHhhCccccccceeeecccc--c-CcceEEE--EcC
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA--A-HKTKIWL--VGD 423 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~--~-~~~~vwi--vg~ 423 (529)
...+|+++|||| -+|+.+.+.|.++ +.+++. ++++.-+.+...-+.-.+..+..+.+++ + +++|+++ +|.
T Consensus 37 ~~~kVaIvGATG--~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~ 114 (381)
T PLN02968 37 EKKRIFVLGASG--YTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH 114 (381)
T ss_pred cccEEEEECCCC--hHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCH
Confidence 456999999999 9999999999955 888777 3322222222221111111111122333 1 5677766 455
Q ss_pred cCChhhhhcCCCCceeecccccCcc-CCCCCceeecC--CccccCCCCccccccccccC---------cc-hhHH-HHHh
Q 009674 424 DLTGKEQARAPKGTIFIPYTQIPPR-KLRKDCFYHST--PAMIIPPSLSNMHSCENWLG---------RR-VMSA-WRIA 489 (529)
Q Consensus 424 ~~~~~~q~~a~~G~~f~~~~~~~~~-~~R~dc~y~~~--~a~~~P~~~~~~~~~e~~~p---------~r-~~~A-c~a~ 489 (529)
..+.+--..+.+|..+||.|- . .+++|..|.+- -....|+-.+. +-+++| ++ +.-+ |.+-
T Consensus 115 ~~s~~i~~~~~~g~~VIDlSs---~fRl~~~~~y~~~y~~p~~~pe~~~~---~~yglpE~~r~~i~~~~iIAnPgC~~t 188 (381)
T PLN02968 115 GTTQEIIKALPKDLKIVDLSA---DFRLRDIAEYEEWYGHPHRAPELQKE---AVYGLTELQREEIKSARLVANPGCYPT 188 (381)
T ss_pred HHHHHHHHHHhCCCEEEEcCc---hhccCCcccchhccCCCCCCcccchh---hhcccchhCHHHhcCCCEEECCCCHHH
Confidence 444444444567988888872 2 34455665554 22233432221 124443 12 2222 9999
Q ss_pred hHhhhhcC
Q 009674 490 GIIHALEG 497 (529)
Q Consensus 490 ~~v~alEg 497 (529)
+++++|--
T Consensus 189 ~~~laL~P 196 (381)
T PLN02968 189 GIQLPLVP 196 (381)
T ss_pred HHHHHHHH
Confidence 99987743
No 80
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.038 Score=53.55 Aligned_cols=44 Identities=16% Similarity=0.190 Sum_probs=38.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.++++++++
T Consensus 6 ~k~vlItGasg--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 51 (249)
T PRK06500 6 GKTALITGGTS--GIGLETARQFLAEGARVAITGRDPASLEAARAELG 51 (249)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhC
Confidence 35799999998 9999999999999999988 88888888877764
No 81
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.023 Score=55.51 Aligned_cols=41 Identities=17% Similarity=0.313 Sum_probs=36.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 396 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 396 (529)
+.|+++|++| -||+++|+.|+++|.+|.+ |++++.++++++
T Consensus 2 ~~vlItGas~--giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATS--GIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh
Confidence 4689999998 9999999999999999988 888888888765
No 82
>PRK06139 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.028 Score=58.78 Aligned_cols=44 Identities=14% Similarity=0.243 Sum_probs=39.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 7 ~k~vlITGAs~--GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~ 52 (330)
T PRK06139 7 GAVVVITGASS--GIGQATAEAFARRGARLVLAARDEEALQAVAEECR 52 (330)
T ss_pred CCEEEEcCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 46899999997 9999999999999999999 99999998887753
No 83
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.034 Score=54.31 Aligned_cols=41 Identities=20% Similarity=0.260 Sum_probs=35.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 396 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 396 (529)
+.|+|+|++| -||+++++.|+++|.+|.. |+.++.+++++.
T Consensus 3 ~~vlVtGasg--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~ 45 (257)
T PRK09291 3 KTILITGAGS--GFGREVALRLARKGHNVIAGVQIAPQVTALRAE 45 (257)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 4799999998 9999999999999999988 777777766654
No 84
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.36 E-value=0.037 Score=56.42 Aligned_cols=43 Identities=23% Similarity=0.346 Sum_probs=38.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++++++.+++
T Consensus 40 ~k~vlItGasg--gIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l 84 (293)
T PRK05866 40 GKRILLTGASS--GIGEAAAEQFARRGATVVAVARREDLLDAVADRI 84 (293)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 46899999998 9999999999999999998 8888888887765
No 85
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.36 E-value=0.053 Score=56.24 Aligned_cols=148 Identities=22% Similarity=0.286 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh
Q 009674 283 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS 339 (529)
Q Consensus 283 ~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns 339 (529)
.+-+.-+..-.+.|++.|++..- |. +++.++++|.|. ++.++.= |++++. +=|||=+
T Consensus 44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl~ 123 (286)
T PRK14175 44 GASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGFH 123 (286)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence 34455566667788999987643 33 344447788873 3555522 322331 2234432
Q ss_pred ----------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674 340 ----------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 397 (529)
Q Consensus 340 ----------------ltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~ 397 (529)
-|++.|++-+. -..++|+|+|+.+ -+|+.+|..|.++|..|++ .++. .
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~--~VG~pla~lL~~~gatVtv~~s~t--~------ 193 (286)
T PRK14175 124 PINIGKLYIDEQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSH--IVGQPVSKLLLQKNASVTILHSRS--K------ 193 (286)
T ss_pred ccchHhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCeEEEEeCCc--h------
Confidence 36666666554 3578999999996 7999999999999999999 2211 1
Q ss_pred ccccccceeeeccccc--CcceEEE--EcCc--CChhhhhcCCCCceeecccccCcc---CCCCCcee
Q 009674 398 PVEAQHNLVLSTSYAA--HKTKIWL--VGDD--LTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY 456 (529)
Q Consensus 398 ~~~~~~~l~~~~~~~~--~~~~vwi--vg~~--~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y 456 (529)
++++ ++++++| +|+- ++++.. ++|++++|+. +++. ++--||-+
T Consensus 194 ------------~l~~~~~~ADIVIsAvg~p~~i~~~~v---k~gavVIDvG-i~~~~~gkl~GDvd~ 245 (286)
T PRK14175 194 ------------DMASYLKDADVIVSAVGKPGLVTKDVV---KEGAVIIDVG-NTPDENGKLKGDVDY 245 (286)
T ss_pred ------------hHHHHHhhCCEEEECCCCCcccCHHHc---CCCcEEEEcC-CCcCCCCCeecCccH
Confidence 1221 3556655 4544 777654 8999999999 7763 34455553
No 86
>PRK06199 ornithine cyclodeaminase; Validated
Probab=95.34 E-value=0.11 Score=55.73 Aligned_cols=155 Identities=13% Similarity=0.091 Sum_probs=100.9
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 009674 299 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 369 (529)
Q Consensus 299 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig~ 369 (529)
.|+|+++.=-=|....+..-.++.+.-+|+ +.-.-+.||+.+|+ |+..+-+ +++.+.+.++|+- -.|+
T Consensus 92 ~gvK~v~~~p~N~~~glp~~~g~v~L~D~~TG~p~Ai~dg~~lTa~RTaA~salaa~~LAr~da~~l~iiG~G---~QA~ 168 (379)
T PRK06199 92 AGVKWYGSNIANREKGLPRSILMFVLNDADTGAPLAIMSANLLSAYRTGAVPGVGARHLARKDSKVVGLLGPG---VMGK 168 (379)
T ss_pred eEEEEeccCCCccccCCCceeEEEEEeeCCCCceEEEEcCcchhhhHHHHHHHHHHHHhccCCCCEEEEECCc---HHHH
Confidence 678887753334333444445566666665 35589999999985 4455656 6788899999987 8999
Q ss_pred HHHHHHh--cc-CcEEEe--cchhhHHHHHhhCccccccce-ee-eccccc--CcceEEEEcC-----------cCChhh
Q 009674 370 AVASSLC--QM-GIKVAT--ICKDDYEKLKLRIPVEAQHNL-VL-STSYAA--HKTKIWLVGD-----------DLTGKE 429 (529)
Q Consensus 370 ava~~L~--~~-~~~v~l--~~~~~~~~l~~~~~~~~~~~l-~~-~~~~~~--~~~~vwivg~-----------~~~~~~ 429 (529)
.-++++| +. -.+|.+ |++++.+++.+++........ +. +.+.++ ++++|++.-. .++.+
T Consensus 169 ~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~s~~~~~s~~Pv~~~~- 247 (379)
T PRK06199 169 TILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNSGETGDPSTYPYVKRE- 247 (379)
T ss_pred HHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccCCCCCCCCcCcEecHH-
Confidence 9999998 33 346666 999999999888765432111 33 347764 8888877322 23344
Q ss_pred hhcCCCCceeecccc--cCccCCCCC-ceeecC
Q 009674 430 QARAPKGTIFIPYTQ--IPPRKLRKD-CFYHST 459 (529)
Q Consensus 430 q~~a~~G~~f~~~~~--~~~~~~R~d-c~y~~~ 459 (529)
|.++|+|+.-... +|+..++.| ..|-+.
T Consensus 248 --~lkpG~hv~~ig~~eld~~~l~~~a~vvvD~ 278 (379)
T PRK06199 248 --WVKPGAFLLMPAACRIDEGMEQGDVRKVVDN 278 (379)
T ss_pred --HcCCCcEEecCCcccCCHHHHhCCCcEEEcC
Confidence 4489999865432 555555553 444444
No 87
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.33 E-value=0.043 Score=54.27 Aligned_cols=43 Identities=19% Similarity=0.281 Sum_probs=38.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.++++++.
T Consensus 5 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~ 49 (262)
T TIGR03325 5 GEVVLVTGGAS--GLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH 49 (262)
T ss_pred CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc
Confidence 46899999998 9999999999999999998 8888888887653
No 88
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.33 E-value=0.036 Score=54.47 Aligned_cols=43 Identities=16% Similarity=0.249 Sum_probs=37.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++++.+.+++
T Consensus 12 ~k~ilItGa~g--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i 56 (259)
T PRK08213 12 GKTALVTGGSR--GLGLQIAEALGEAGARVVLSARKAEELEEAAAHL 56 (259)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 8888887776654
No 89
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.039 Score=53.66 Aligned_cols=43 Identities=21% Similarity=0.338 Sum_probs=36.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+++..+++++++
T Consensus 6 ~k~vlItGasg--~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~ 50 (250)
T PRK07774 6 DKVAIVTGAAG--GIGQAYAEALAREGASVVVADINAEGAERVAKQI 50 (250)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 36799999998 9999999999999999998 7777777776664
No 90
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.32 E-value=0.04 Score=53.98 Aligned_cols=42 Identities=21% Similarity=0.313 Sum_probs=37.4
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.|+++|++| -||+++|+.|+++|.+|.+ |++++.+.++++++
T Consensus 2 ~vlItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 45 (248)
T PRK10538 2 IVLVTGATA--GFGECITRRFIQQGHKVIATGRRQERLQELKDELG 45 (248)
T ss_pred EEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence 589999998 9999999999999999998 88888888877654
No 91
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.32 E-value=0.039 Score=54.09 Aligned_cols=46 Identities=15% Similarity=0.149 Sum_probs=39.2
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
...+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 9 ~~~k~ilItGas~--~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 56 (256)
T PRK06124 9 LAGQVALVTGSAR--GLGFEIARALAGAGAHVLVNGRNAATLEAAVAALR 56 (256)
T ss_pred CCCCEEEEECCCc--hHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHH
Confidence 3457899999998 9999999999999999999 88888877766653
No 92
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=95.29 E-value=0.035 Score=54.10 Aligned_cols=43 Identities=19% Similarity=0.304 Sum_probs=36.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
++++++|++| -||+++++.|+++|.+|++ |+.++.+++.+++.
T Consensus 1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~ 45 (254)
T TIGR02415 1 KVALVTGGAQ--GIGKGIAERLAKDGFAVAVADLNEETAKETAKEIN 45 (254)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 4689999998 9999999999999999988 77777777766543
No 93
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.28 E-value=0.035 Score=54.46 Aligned_cols=38 Identities=24% Similarity=0.269 Sum_probs=35.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 394 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 394 (529)
.|+|+|||| .||+++|+.|.++|.+|.. |+.++...+.
T Consensus 2 ~ilV~GatG--~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~ 41 (275)
T COG0702 2 KILVTGATG--FVGGAVVRELLARGHEVRAAVRNPEAAAALA 41 (275)
T ss_pred eEEEEeccc--chHHHHHHHHHhCCCEEEEEEeCHHHHHhhc
Confidence 689999999 9999999999999999999 9999999887
No 94
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=95.23 E-value=0.082 Score=58.38 Aligned_cols=141 Identities=18% Similarity=0.184 Sum_probs=92.4
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--Ec-
Q 009674 350 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG- 422 (529)
Q Consensus 350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg- 422 (529)
.-..++|.|+|.- .||+++|+.|...|.+|+. ++..+. ++... .+. +..++++ +.+|++| .|
T Consensus 251 ~LaGKtVgVIG~G---~IGr~vA~rL~a~Ga~ViV~e~dp~~a--~~A~~-~G~-----~~~~leell~~ADIVI~atGt 319 (476)
T PTZ00075 251 MIAGKTVVVCGYG---DVGKGCAQALRGFGARVVVTEIDPICA--LQAAM-EGY-----QVVTLEDVVETADIFVTATGN 319 (476)
T ss_pred CcCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchhH--HHHHh-cCc-----eeccHHHHHhcCCEEEECCCc
Confidence 3457799999966 8999999999999999988 343332 22111 111 2234543 5667765 33
Q ss_pred -CcCChhhhhcCCCCceeecccccCcc----CCC--CC--ceee--cCCccccCC----------CCccccccccccCcc
Q 009674 423 -DDLTGKEQARAPKGTIFIPYTQIPPR----KLR--KD--CFYH--STPAMIIPP----------SLSNMHSCENWLGRR 481 (529)
Q Consensus 423 -~~~~~~~q~~a~~G~~f~~~~~~~~~----~~R--~d--c~y~--~~~a~~~P~----------~~~~~~~~e~~~p~r 481 (529)
..|+.+....|++|++++.+++++.+ .++ .| ..-. ......+|. .+-|+. |-.+.|..
T Consensus 320 ~~iI~~e~~~~MKpGAiLINvGr~d~Ei~i~aL~~~~~vdv~evep~v~~~~~~~g~~i~llaeGrlvNl~-~~~GhP~~ 398 (476)
T PTZ00075 320 KDIITLEHMRRMKNNAIVGNIGHFDNEIQVAELEAYPGIEIVEIKPQVDRYTFPDGKGIILLAEGRLVNLG-CATGHPSF 398 (476)
T ss_pred ccccCHHHHhccCCCcEEEEcCCCchHHhHHHHHhcCCceeecccCCCCeEEeCCCCEEEEEeCCCccccC-CCCCCCee
Confidence 46888999999999999999997633 122 11 1111 111122442 356677 88899999
Q ss_pred hhHHHHHhhHhhhhcCCCCCc
Q 009674 482 VMSAWRIAGIIHALEGWDLNE 502 (529)
Q Consensus 482 ~~~Ac~a~~~v~alEgw~~~e 502 (529)
+|+-.++--.+-.+|=|..++
T Consensus 399 vMd~sfa~Q~la~~~l~~~~~ 419 (476)
T PTZ00075 399 VMSNSFTNQVLAQIELWENRD 419 (476)
T ss_pred EeeHHHHHHHHHHHHHHhccC
Confidence 999988877776666665544
No 95
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.21 E-value=0.083 Score=54.62 Aligned_cols=126 Identities=13% Similarity=0.127 Sum_probs=76.3
Q ss_pred chhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHh-----cCcCCC
Q 009674 279 PWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVN-----SLPKTT 353 (529)
Q Consensus 279 ~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~-----~i~~~~ 353 (529)
|.-.....+.+.+++..|.. .|++|. +| +|.++..+. +-..= |...+++ +++-..
T Consensus 100 Plp~~i~~~~~ld~I~~aKD-------Vdg~n~---~n-~G~l~~~~~---~~~p~------T~~gii~~L~~~~i~l~G 159 (283)
T PRK14192 100 PVPAQIDERACFDAISLAKD-------VDGVTC---LG-FGRMAMGEA---AYGSA------TPAGIMRLLKAYNIELAG 159 (283)
T ss_pred CCccccCHHHHHhccCHHHh-------cCCCCc---cc-cCccccCCC---cccCC------cHHHHHHHHHHcCCCCCC
Confidence 33334444557777754444 356777 55 555554332 22222 3344444 344567
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecccccCcceEEEEc----CcCChhh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVG----DDLTGKE 429 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg----~~~~~~~ 429 (529)
++|+++|+.| -+|+++|..|.++|..|++-+. +-++|++.+ ++++++|.. +.++++.
T Consensus 160 k~vvViG~gg--~vGkpia~~L~~~gatVtv~~~-~t~~L~~~~----------------~~aDIvI~AtG~~~~v~~~~ 220 (283)
T PRK14192 160 KHAVVVGRSA--ILGKPMAMMLLNANATVTICHS-RTQNLPELV----------------KQADIIVGAVGKPELIKKDW 220 (283)
T ss_pred CEEEEECCcH--HHHHHHHHHHHhCCCEEEEEeC-CchhHHHHh----------------ccCCEEEEccCCCCcCCHHH
Confidence 7999999997 8999999999999999998111 223333332 245565522 2455554
Q ss_pred hhcCCCCceeecccccCc
Q 009674 430 QARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 430 q~~a~~G~~f~~~~~~~~ 447 (529)
.++|++++|+. +.|
T Consensus 221 ---lk~gavViDvg-~n~ 234 (283)
T PRK14192 221 ---IKQGAVVVDAG-FHP 234 (283)
T ss_pred ---cCCCCEEEEEE-Eee
Confidence 49999999998 555
No 96
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.20 E-value=0.04 Score=53.24 Aligned_cols=43 Identities=26% Similarity=0.371 Sum_probs=36.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 7 ~~ilItGasg--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~ 51 (251)
T PRK12826 7 RVALVTGAAR--GIGRAIAVRLAADGAEVIVVDICGDDAAATAELVE 51 (251)
T ss_pred CEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 5799999998 9999999999999999988 88777776666543
No 97
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.19 E-value=0.037 Score=54.73 Aligned_cols=44 Identities=14% Similarity=0.290 Sum_probs=36.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~ 398 (529)
.+.|+++|+++ -||+++|+.|+++|.+|.+ +++++.+++.+++.
T Consensus 8 ~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~ 54 (260)
T PRK08416 8 GKTLVISGGTR--GIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLE 54 (260)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 46899999997 9999999999999999987 46677777665543
No 98
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.19 E-value=0.045 Score=54.23 Aligned_cols=49 Identities=14% Similarity=0.135 Sum_probs=40.8
Q ss_pred cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 348 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 348 ~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
..+...+.++++|++| -||+++|+.|+++|.+|.+ |+.++++++++++.
T Consensus 5 ~~~~~~k~~lItGa~~--~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~ 55 (265)
T PRK07097 5 LFSLKGKIALITGASY--GIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYR 55 (265)
T ss_pred ccCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHH
Confidence 3344567899999998 9999999999999999988 78888877766653
No 99
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.16 E-value=0.073 Score=49.57 Aligned_cols=74 Identities=15% Similarity=0.144 Sum_probs=52.8
Q ss_pred cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--Ec
Q 009674 348 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG 422 (529)
Q Consensus 348 ~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg 422 (529)
+++-..++|.++|.+. .+|+.+|..|.++|..|++ .++. .++++ +.+||+| +|
T Consensus 23 ~~~~~gk~v~VvGrs~--~vG~pla~lL~~~gatV~~~~~~t--------------------~~l~~~v~~ADIVvsAtg 80 (140)
T cd05212 23 GVRLDGKKVLVVGRSG--IVGAPLQCLLQRDGATVYSCDWKT--------------------IQLQSKVHDADVVVVGSP 80 (140)
T ss_pred CCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEeCCCC--------------------cCHHHHHhhCCEEEEecC
Confidence 4455788999999998 9999999999999999999 2110 02232 4566655 33
Q ss_pred --CcCChhhhhcCCCCceeecccccCc
Q 009674 423 --DDLTGKEQARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 423 --~~~~~~~q~~a~~G~~f~~~~~~~~ 447 (529)
..++++.+ ++|++++|+. .+.
T Consensus 81 ~~~~i~~~~i---kpGa~Vidvg-~~~ 103 (140)
T cd05212 81 KPEKVPTEWI---KPGATVINCS-PTK 103 (140)
T ss_pred CCCccCHHHc---CCCCEEEEcC-CCc
Confidence 33555554 9999999987 443
No 100
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.15 E-value=0.041 Score=53.60 Aligned_cols=42 Identities=19% Similarity=0.295 Sum_probs=36.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
++|+++|++| -||+++|+.|+++|.+|++ |++++.+.+.+++
T Consensus 2 ~~vlItGas~--giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~ 45 (243)
T PRK07102 2 KKILIIGATS--DIARACARRYAAAGARLYLAARDVERLERLADDL 45 (243)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHH
Confidence 4799999998 9999999999999999988 8888777665553
No 101
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.14 E-value=0.043 Score=52.61 Aligned_cols=42 Identities=24% Similarity=0.313 Sum_probs=36.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
+.|+++|++| .||+.+|+.|.++|.+|.+ |++++.+.+.+++
T Consensus 6 ~~ilItGasg--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 49 (246)
T PRK05653 6 KTALVTGASR--GIGRAIALRLAADGAKVVIYDSNEEAAEALAAEL 49 (246)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Confidence 5799999998 9999999999999999888 8888777665553
No 102
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.051 Score=52.86 Aligned_cols=44 Identities=20% Similarity=0.330 Sum_probs=38.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++++++..
T Consensus 3 k~vlItGas~--giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~ 48 (248)
T PRK08251 3 QKILITGASS--GLGAGMAREFAAKGRDLALCARRTDRLEELKAELLA 48 (248)
T ss_pred CEEEEECCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh
Confidence 5799999998 9999999999999999988 888888888766443
No 103
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.031 Score=55.45 Aligned_cols=44 Identities=18% Similarity=0.215 Sum_probs=38.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.|+|+|++| .||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 5 ~~~ilVtGasg--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 50 (273)
T PRK07825 5 GKVVAITGGAR--GIGLATARALAALGARVAIGDLDEALAKETAAELG 50 (273)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence 35799999998 9999999999999999988 88888888877654
No 104
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.027 Score=55.36 Aligned_cols=45 Identities=20% Similarity=0.226 Sum_probs=39.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++..
T Consensus 7 ~k~vlVtGas~--gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~ 53 (260)
T PRK07063 7 GKVALVTGAAQ--GIGAAIARAFAREGAAVALADLDAALAERAAAAIAR 53 (260)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 46799999998 9999999999999999988 888888888877643
No 105
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=95.08 E-value=0.059 Score=56.03 Aligned_cols=48 Identities=15% Similarity=0.078 Sum_probs=37.7
Q ss_pred hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674 347 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 396 (529)
Q Consensus 347 ~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 396 (529)
++......+|+|+|++| -||+.+++.|.++|.+|.. |+.++.+.+.++
T Consensus 4 ~~~~~~~~~vLVtG~~G--fIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~ 53 (353)
T PLN02896 4 EGRESATGTYCVTGATG--YIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSK 53 (353)
T ss_pred cccccCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh
Confidence 34444567899999999 9999999999999999987 666655555444
No 106
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.05 E-value=0.047 Score=53.52 Aligned_cols=43 Identities=26% Similarity=0.392 Sum_probs=37.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++++++.
T Consensus 2 k~~lItG~s~--giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~ 46 (252)
T PRK07677 2 KVVIITGGSS--GMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIE 46 (252)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 5789999998 9999999999999999988 88888888777654
No 107
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=95.03 E-value=0.049 Score=52.98 Aligned_cols=42 Identities=19% Similarity=0.133 Sum_probs=35.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 397 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 397 (529)
+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 3 k~ilItGas~--giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 47 (248)
T PRK06947 3 KVVLITGASR--GIGRATAVLAAARGWSVGINYARDAAAAEETADAV 47 (248)
T ss_pred cEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 5799999998 9999999999999999876 5667776665554
No 108
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.03 E-value=0.056 Score=53.35 Aligned_cols=43 Identities=26% Similarity=0.394 Sum_probs=38.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
.+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++++++
T Consensus 5 ~~~vlItG~s~--~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (263)
T PRK09072 5 DKRVLLTGASG--GIGQALAEALAAAGARLLLVGRNAEKLEALAARL 49 (263)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 35799999998 9999999999999999998 8888888888776
No 109
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.02 E-value=0.04 Score=54.33 Aligned_cols=44 Identities=18% Similarity=0.363 Sum_probs=39.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.++++++++.
T Consensus 3 ~~vlItGas~--gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~ 48 (257)
T PRK07024 3 LKVFITGASS--GIGQALAREYARQGATLGLVARRTDALQAFAARLPK 48 (257)
T ss_pred CEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc
Confidence 5799999998 9999999999999999998 888888888877643
No 110
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.02 E-value=0.03 Score=57.59 Aligned_cols=44 Identities=16% Similarity=0.150 Sum_probs=38.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.++++|+++ -||+++|+.|+++|.+|.+ |+.++.++..+++.
T Consensus 14 gk~~lITGas~--GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~ 59 (313)
T PRK05854 14 GKRAVVTGASD--GLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIR 59 (313)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46799999997 9999999999999999998 88888887776653
No 111
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=95.00 E-value=0.13 Score=54.54 Aligned_cols=158 Identities=16% Similarity=0.128 Sum_probs=104.9
Q ss_pred HHcCCcEEEecccccc-cccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchh
Q 009674 297 DAKGVKVISLGLLNQG-EELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANK 366 (529)
Q Consensus 297 ~k~G~kv~~LG~ln~~-e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~k 366 (529)
+-.|+|+++ |-.... ..|..-.++.+--.|+ +..+-+.||+.+|+ |++.+-+ +++.+.+.++|+- .
T Consensus 65 ~~~gvK~v~-~~p~N~~~glp~v~g~~~L~d~~TG~plal~d~~~lTa~RTaAasavAa~~LA~~da~~laiIGaG---~ 140 (330)
T COG2423 65 DVAGVKIVG-VHPDNPARGLPTVSGVIVLFDAETGEPLALLDATRLTALRTAAASAVAAKYLARKDASTLAIIGAG---A 140 (330)
T ss_pred CeEEEEEec-CcCCccccCCCcceEEEEEEecCCCCEEEEecCccHHHHHHHHHHHHHHHHhccCCCcEEEEECCc---H
Confidence 345777776 222221 3444444555555555 45599999999985 3445544 6689999999997 9
Q ss_pred hHHHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE-----EcCcCChhhhhcCCC
Q 009674 367 VANAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL-----VGDDLTGKEQARAPK 435 (529)
Q Consensus 367 ig~ava~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi-----vg~~~~~~~q~~a~~ 435 (529)
.++.-+++++ +.-.++.+ |+++.-+++.+.+..........+.+.++ ..++|++ -.-.++.+.+ +|
T Consensus 141 qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~Pil~~~~l---~~ 217 (330)
T COG2423 141 QARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEPVLKAEWL---KP 217 (330)
T ss_pred HHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCCeecHhhc---CC
Confidence 9999999999 55555666 99999998887766655444234556664 6777777 2234455544 79
Q ss_pred Cceeecccc-------cCcc-CCCCCceeecCCc
Q 009674 436 GTIFIPYTQ-------IPPR-KLRKDCFYHSTPA 461 (529)
Q Consensus 436 G~~f~~~~~-------~~~~-~~R~dc~y~~~~a 461 (529)
|+|+.-+.. ++++ -.|-||.+-+.+.
T Consensus 218 G~hI~aiGad~p~k~Eld~e~l~ra~~vvvD~~~ 251 (330)
T COG2423 218 GTHINAIGADAPGKRELDPEVLARADRVVVDSLE 251 (330)
T ss_pred CcEEEecCCCCcccccCCHHHHHhcCeEEEcCHH
Confidence 999998874 5555 3445576665554
No 112
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.98 E-value=0.058 Score=51.79 Aligned_cols=43 Identities=23% Similarity=0.291 Sum_probs=33.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~~ 397 (529)
.+.|+++|++| .||+++|+.|+++|.+|.+ |+. ++.+++.+++
T Consensus 5 ~~~vlItG~sg--~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 50 (248)
T PRK05557 5 GKVALVTGASR--GIGRAIAERLAAQGANVVINYASSEAGAEALVAEI 50 (248)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence 46899999998 9999999999999999966 433 3455554443
No 113
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=94.97 E-value=0.047 Score=49.72 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=35.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cc--hhhHHHHHhhCc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT--IC--KDDYEKLKLRIP 398 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l--~~--~~~~~~l~~~~~ 398 (529)
+.|+++|+++ -||+++|+.|+++ +.+|.+ |+ .++.+++.++++
T Consensus 1 k~~lItGa~~--giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~ 48 (167)
T PF00106_consen 1 KTVLITGASS--GIGRALARALARRGARVVILTSRSEDSEGAQELIQELK 48 (167)
T ss_dssp EEEEEETTTS--HHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCC--HHHHHHHHHHHhcCceEEEEeeeccccccccccccccc
Confidence 5789999997 9999999999988 556566 77 678888877755
No 114
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.96 E-value=0.046 Score=53.25 Aligned_cols=39 Identities=21% Similarity=0.299 Sum_probs=32.5
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cch--hhHHHHHhh
Q 009674 356 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLR 396 (529)
Q Consensus 356 V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~--~~~~~l~~~ 396 (529)
|+|+|||| ++|+.++++|.+.+.+|.. |+. ++.++|++.
T Consensus 1 I~V~GatG--~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~ 43 (233)
T PF05368_consen 1 ILVTGATG--NQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQAL 43 (233)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHT
T ss_pred CEEECCcc--HHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcc
Confidence 78999999 9999999999999998888 653 456666654
No 115
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.96 E-value=0.03 Score=58.65 Aligned_cols=53 Identities=19% Similarity=0.203 Sum_probs=44.7
Q ss_pred HHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 345 VVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 345 v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
+.+.++-....++|+|+|+ -||+++|+.|+++|.+|.| ||.++-++.++++..
T Consensus 27 ~~~~~~~~~~~~vVTGans--GIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~ 81 (314)
T KOG1208|consen 27 VTHGIDLSGKVALVTGATS--GIGFETARELALRGAHVVLACRNEERGEEAKEQIQK 81 (314)
T ss_pred eeccccCCCcEEEEECCCC--chHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 3344444557899999996 9999999999999999999 999999988888665
No 116
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.95 E-value=0.059 Score=52.80 Aligned_cols=43 Identities=16% Similarity=0.203 Sum_probs=37.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++.
T Consensus 3 k~ilItGat~--~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~ 47 (257)
T PRK07074 3 RTALVTGAAG--GIGQALARRFLAAGDRVLALDIDAAALAAFADALG 47 (257)
T ss_pred CEEEEECCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence 5799999998 9999999999999999988 88888888877663
No 117
>PRK05876 short chain dehydrogenase; Provisional
Probab=94.95 E-value=0.052 Score=54.65 Aligned_cols=44 Identities=11% Similarity=0.203 Sum_probs=38.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.|+|+|++| -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 6 ~k~vlVTGas~--gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~ 51 (275)
T PRK05876 6 GRGAVITGGAS--GIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLR 51 (275)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 35799999998 9999999999999999998 88888887766653
No 118
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=94.95 E-value=0.057 Score=55.41 Aligned_cols=44 Identities=18% Similarity=0.183 Sum_probs=39.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.|+|+|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 6 ~k~vlVTGas~--gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~ 51 (322)
T PRK07453 6 KGTVIITGASS--GVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELG 51 (322)
T ss_pred CCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh
Confidence 46799999998 9999999999999999988 88888888877763
No 119
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.94 E-value=0.047 Score=55.75 Aligned_cols=38 Identities=21% Similarity=0.136 Sum_probs=32.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 393 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l 393 (529)
+.|+|+|+|| -||+++++.|.++|.+|.. |+.++.+++
T Consensus 6 ~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 45 (322)
T PLN02986 6 KLVCVTGASG--YIASWIVKLLLLRGYTVKATVRDLTDRKKT 45 (322)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCCcchHHH
Confidence 6899999999 9999999999999999975 766554443
No 120
>PRK12746 short chain dehydrogenase; Provisional
Probab=94.94 E-value=0.056 Score=52.77 Aligned_cols=42 Identities=24% Similarity=0.237 Sum_probs=35.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 397 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 397 (529)
+.|+++|++| -||+++|+.|.++|.+|.+ |++++.+++.+++
T Consensus 7 ~~ilItGasg--~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~ 51 (254)
T PRK12746 7 KVALVTGASR--GIGRAIAMRLANDGALVAIHYGRNKQAADETIREI 51 (254)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 6899999998 9999999999999999865 7777776665554
No 121
>PRK06138 short chain dehydrogenase; Provisional
Probab=94.91 E-value=0.064 Score=52.08 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=37.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.++++|++| .||+++|+.|.++|.+|.+ |+.++.+.+++++.
T Consensus 5 ~k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 50 (252)
T PRK06138 5 GRVAIVTGAGS--GIGRATAKLFAREGARVVVADRDAEAAERVAAAIA 50 (252)
T ss_pred CcEEEEeCCCc--hHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh
Confidence 46899999998 9999999999999999988 88887777766653
No 122
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.91 E-value=0.054 Score=53.16 Aligned_cols=43 Identities=16% Similarity=0.231 Sum_probs=36.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 3 k~ilItG~~~--~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~ 47 (259)
T PRK12384 3 QVAVVIGGGQ--TLGAFLCHGLAEEGYRVAVADINSEKAANVAQEIN 47 (259)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 5799999998 9999999999999999988 77777777766543
No 123
>PRK12939 short chain dehydrogenase; Provisional
Probab=94.91 E-value=0.063 Score=51.95 Aligned_cols=43 Identities=21% Similarity=0.265 Sum_probs=37.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+.+.+++
T Consensus 7 ~~~vlItGa~g--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (250)
T PRK12939 7 GKRALVTGAAR--GLGAAFAEALAEAGATVAFNDGLAAEARELAAAL 51 (250)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999888 7888777776654
No 124
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.90 E-value=0.057 Score=52.79 Aligned_cols=43 Identities=19% Similarity=0.317 Sum_probs=37.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
.+.|+|+|++| -||+++|+.|.++|.+|.+ |++++.+++.+++
T Consensus 7 ~~~vlItGasg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (262)
T PRK13394 7 GKTAVVTGAAS--GIGKEIALELARAGAAVAIADLNQDGANAVADEI 51 (262)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Confidence 46899999998 9999999999999999988 8887777776664
No 125
>PRK06172 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.054 Score=52.98 Aligned_cols=43 Identities=21% Similarity=0.170 Sum_probs=37.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 7 ~k~ilItGas~--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (253)
T PRK06172 7 GKVALVTGGAA--GIGRATALAFAREGAKVVVADRDAAGGEETVALI 51 (253)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 8888877776654
No 126
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.87 E-value=0.063 Score=52.85 Aligned_cols=44 Identities=14% Similarity=0.220 Sum_probs=35.9
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
...+.|+++|++| -||+++|+.|+++|.+|.+ |+ ++.+++++++
T Consensus 13 l~~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~ 58 (258)
T PRK06935 13 LDGKVAIVTGGNT--GLGQGYAVALAKAGADIIITTHG-TNWDETRRLI 58 (258)
T ss_pred CCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHH
Confidence 3457899999998 9999999999999999988 55 5556665553
No 127
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=94.87 E-value=0.055 Score=53.89 Aligned_cols=44 Identities=23% Similarity=0.256 Sum_probs=38.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 10 ~k~vlVtGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 55 (278)
T PRK08277 10 GKVAVITGGGG--VLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIK 55 (278)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 88888888777753
No 128
>PRK05993 short chain dehydrogenase; Provisional
Probab=94.84 E-value=0.041 Score=55.11 Aligned_cols=41 Identities=20% Similarity=0.271 Sum_probs=36.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 396 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 396 (529)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++++.++++
T Consensus 5 k~vlItGasg--giG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~ 47 (277)
T PRK05993 5 RSILITGCSS--GIGAYCARALQSDGWRVFATCRKEEDVAALEAE 47 (277)
T ss_pred CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC
Confidence 5799999998 9999999999999999998 888888888764
No 129
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=94.84 E-value=0.038 Score=54.56 Aligned_cols=42 Identities=21% Similarity=0.286 Sum_probs=37.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
+|+++|++| -||+++|+.|+++|.+|.+ |++++.+++++++.
T Consensus 2 ~vlItGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~ 45 (259)
T PRK08340 2 NVLVTASSR--GIGFNVARELLKKGARVVISSRNEENLEKALKELK 45 (259)
T ss_pred eEEEEcCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 689999998 9999999999999999998 88888888877764
No 130
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=94.82 E-value=0.083 Score=58.88 Aligned_cols=181 Identities=15% Similarity=0.154 Sum_probs=106.3
Q ss_pred HHHcCCcEEEecccc------------cccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEecccC
Q 009674 296 ADAKGVKVISLGLLN------------QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 363 (529)
Q Consensus 296 A~k~G~kv~~LG~ln------------~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~i~~~~~~V~~~Gatg 363 (529)
..++|+.++++=... ++-++.|+......-| .|.-++ +|.+-++. .+| .++|+|.|+-
T Consensus 104 l~~k~it~ia~E~vprisraq~~d~lssma~iAGy~Avi~Aa~--~lgr~~-~g~~taag----~vp--~akVlViGaG- 173 (511)
T TIGR00561 104 LAAKNITVLAMDAVPRISRAQKLDALSSMANIAGYRAIIEAAH--EFGRFF-TGQITAAG----KVP--PAKVLVIGAG- 173 (511)
T ss_pred HHHcCCEEEEeecccccccCCccCcchhhHHHHHHHHHHHHHH--Hhhhhc-CCceecCC----CCC--CCEEEEECCC-
Confidence 356778888876444 3345555554444433 033333 45544432 344 4899999984
Q ss_pred chhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc------------ccceeeec-c--------ccc--CcceE
Q 009674 364 ANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA------------QHNLVLST-S--------YAA--HKTKI 418 (529)
Q Consensus 364 ~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~------------~~~l~~~~-~--------~~~--~~~~v 418 (529)
-+|.+.+..+...|.+|.. ++.++++..++ ++.+. ..+-...+ + +.+ +++||
T Consensus 174 --~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DI 250 (511)
T TIGR00561 174 --VAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDI 250 (511)
T ss_pred --HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHHHHHHhCCCCE
Confidence 8999999999999998887 77778776664 33322 01100111 1 222 45677
Q ss_pred EE--E---cC----cCChhhhhcCCCCceeecccccCcc----CCCCCceeecCCccccCCCCccccccccccCcc---h
Q 009674 419 WL--V---GD----DLTGKEQARAPKGTIFIPYTQIPPR----KLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRR---V 482 (529)
Q Consensus 419 wi--v---g~----~~~~~~q~~a~~G~~f~~~~~~~~~----~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r---~ 482 (529)
+| + |+ .++.++++.|++|.+++|++ .++- -.|.+.+|.+. +.+. +.|--.+|.+ +
T Consensus 251 VI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA-~d~GGn~E~t~p~~~~~~~------~GV~--~~gv~nlPs~~p~~ 321 (511)
T TIGR00561 251 IITTALIPGKPAPKLITEEMVDSMKAGSVIVDLA-AEQGGNCEYTKPGEVYTTE------NQVK--VIGYTDLPSRLPTQ 321 (511)
T ss_pred EEECcccCCCCCCeeehHHHHhhCCCCCEEEEee-eCCCCCEEEecCceEEEec------CCEE--EEeeCCccccCHHH
Confidence 66 2 43 38999999999999999999 6654 22333333221 1122 3355666665 3
Q ss_pred hHHHHHhhHhhhhcCC
Q 009674 483 MSAWRIAGIIHALEGW 498 (529)
Q Consensus 483 ~~Ac~a~~~v~alEgw 498 (529)
.+--.+..++.-||.-
T Consensus 322 AS~l~s~nl~~~l~~l 337 (511)
T TIGR00561 322 SSQLYGTNLVNLLKLL 337 (511)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445566666555553
No 131
>PRK05872 short chain dehydrogenase; Provisional
Probab=94.82 E-value=0.05 Score=55.29 Aligned_cols=46 Identities=17% Similarity=0.244 Sum_probs=41.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
..+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.++++.
T Consensus 8 ~gk~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~ 55 (296)
T PRK05872 8 AGKVVVVTGAAR--GIGAELARRLHARGAKLALVDLEEAELAALAAELGG 55 (296)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC
Confidence 356899999998 9999999999999999988 899999999888754
No 132
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=94.80 E-value=0.099 Score=53.69 Aligned_cols=127 Identities=13% Similarity=0.053 Sum_probs=77.2
Q ss_pred ecCChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeee-
Q 009674 335 VDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLS- 408 (529)
Q Consensus 335 v~Gnsltaavv~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~- 408 (529)
|||.-...+.--..+ +...++|+|+||- -.|+|++.+|.+.|+ ++++ |+.+|.++|.+++........+..
T Consensus 105 TD~~G~~~~l~~~~~~~~~~~k~vlvlGaG---Gaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~ 181 (282)
T TIGR01809 105 TDWDGIAGALANIGKFEPLAGFRGLVIGAG---GTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGD 181 (282)
T ss_pred CCHHHHHHHHHhhCCccccCCceEEEEcCc---HHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccch
Confidence 666666666543332 2245689999996 579999999999997 5777 999999999887643211000011
Q ss_pred ccccc--CcceEEE----EcCcCChhhhhc---------CCCCceeecccccCcc-----CCC-CCceeecCCcccc
Q 009674 409 TSYAA--HKTKIWL----VGDDLTGKEQAR---------APKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII 464 (529)
Q Consensus 409 ~~~~~--~~~~vwi----vg~~~~~~~q~~---------a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~ 464 (529)
.++++ .+++++| +|..++++++.. .+++..+.|..=-|.+ ..| +-|....+..|-+
T Consensus 182 ~~~~~~~~~~DiVInaTp~g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv 258 (282)
T TIGR01809 182 SGGLAIEKAAEVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAAYDPWPTPLVAIVSAAGWRVISGLQMLL 258 (282)
T ss_pred hhhhhcccCCCEEEECCCCCCCCCHHHhhhhhhhhccccCCCCcEEEEEeeCCCCCHHHHHHHHCCCEEECcHHHHH
Confidence 12222 4567777 676666655421 2456677777732222 112 4466666666654
No 133
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.80 E-value=0.042 Score=53.50 Aligned_cols=41 Identities=27% Similarity=0.348 Sum_probs=37.0
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
+|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 2 ~vlItGas~--giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~ 44 (223)
T PRK05884 2 EVLVTGGDT--DLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL 44 (223)
T ss_pred eEEEEeCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence 589999998 9999999999999999988 8888888887765
No 134
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=94.80 E-value=0.044 Score=56.64 Aligned_cols=29 Identities=21% Similarity=0.229 Sum_probs=27.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
++|+|+||+| =||+++++.|.++|.+|..
T Consensus 1 ~~vlVTGatG--fIG~~l~~~L~~~G~~V~~ 29 (343)
T TIGR01472 1 KIALITGITG--QDGSYLAEFLLEKGYEVHG 29 (343)
T ss_pred CeEEEEcCCC--cHHHHHHHHHHHCCCEEEE
Confidence 4799999999 9999999999999999987
No 135
>PRK08589 short chain dehydrogenase; Validated
Probab=94.79 E-value=0.055 Score=54.06 Aligned_cols=43 Identities=23% Similarity=0.278 Sum_probs=36.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.|+++|+++ -||+++|+.|+++|.+|.+ |+ ++.+++.+++.
T Consensus 6 ~k~vlItGas~--gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~ 50 (272)
T PRK08589 6 NKVAVITGAST--GIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIK 50 (272)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHH
Confidence 45799999998 9999999999999999998 76 77777766653
No 136
>PRK06125 short chain dehydrogenase; Provisional
Probab=94.78 E-value=0.058 Score=53.15 Aligned_cols=45 Identities=20% Similarity=0.265 Sum_probs=39.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++++++..
T Consensus 7 ~k~vlItG~~~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~ 53 (259)
T PRK06125 7 GKRVLITGASK--GIGAAAAEAFAAEGCHLHLVARDADALEALAADLRA 53 (259)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh
Confidence 47899999998 9999999999999999988 888888887776543
No 137
>PRK07831 short chain dehydrogenase; Provisional
Probab=94.77 E-value=0.06 Score=53.13 Aligned_cols=45 Identities=16% Similarity=0.178 Sum_probs=37.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.++++|++| +-||+++|+.|+++|.+|.+ |+.+++++..+++.
T Consensus 17 ~k~vlItG~sg-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~ 63 (262)
T PRK07831 17 GKVVLVTAAAG-TGIGSATARRALEEGARVVISDIHERRLGETADELA 63 (262)
T ss_pred CCEEEEECCCc-ccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 46899999996 35999999999999999998 77777777666543
No 138
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=94.77 E-value=0.039 Score=57.35 Aligned_cols=78 Identities=14% Similarity=0.193 Sum_probs=48.1
Q ss_pred EEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCccccccceeeecccccCcce-EEEEcCcCChhhhh
Q 009674 356 VLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTK-IWLVGDDLTGKEQA 431 (529)
Q Consensus 356 V~~~Gatg~~kig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~-vwivg~~~~~~~q~ 431 (529)
|+++||+| +||+.+|+.|++.+.+ +.+ +++..+-.+++++....... ++ ... +-++||.-+.+...
T Consensus 1 VLVTGa~G--SIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~-----~v---~~~~~~vigDvrd~~~l~ 70 (293)
T PF02719_consen 1 VLVTGAGG--SIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDP-----KV---RFEIVPVIGDVRDKERLN 70 (293)
T ss_dssp EEEETTTS--HHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--T-----TC---EEEEE--CTSCCHHHHHH
T ss_pred CEEEcccc--HHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhccccc-----Cc---ccccCceeecccCHHHHH
Confidence 78999999 9999999999988864 555 88889999999975433221 00 111 24567777776654
Q ss_pred cC----CCCceeeccc
Q 009674 432 RA----PKGTIFIPYT 443 (529)
Q Consensus 432 ~a----~~G~~f~~~~ 443 (529)
.+ .+-.+||--+
T Consensus 71 ~~~~~~~pdiVfHaAA 86 (293)
T PF02719_consen 71 RIFEEYKPDIVFHAAA 86 (293)
T ss_dssp HHTT--T-SEEEE---
T ss_pred HHHhhcCCCEEEEChh
Confidence 44 4555555444
No 139
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.75 E-value=0.064 Score=53.28 Aligned_cols=41 Identities=17% Similarity=0.296 Sum_probs=36.0
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
+|+++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++
T Consensus 2 ~vlVtGasg--gIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l 44 (270)
T PRK05650 2 RVMITGAAS--GLGRAIALRWAREGWRLALADVNEEGGEETLKLL 44 (270)
T ss_pred EEEEecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 689999998 9999999999999999988 8888877766654
No 140
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.74 E-value=0.068 Score=51.85 Aligned_cols=43 Identities=21% Similarity=0.326 Sum_probs=37.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
.+.++++|++| -||+++|+.|.++|.+|.+ |++++.+++.+++
T Consensus 3 ~~~ilItGas~--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~ 47 (250)
T TIGR03206 3 DKTAIVTGGGG--GIGGATCRRFAEEGAKVAVFDLNREAAEKVAADI 47 (250)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHH
Confidence 46799999998 9999999999999999988 7887777776654
No 141
>PRK08017 oxidoreductase; Provisional
Probab=94.73 E-value=0.046 Score=53.32 Aligned_cols=40 Identities=23% Similarity=0.295 Sum_probs=35.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 395 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 395 (529)
+.|+|+|++| -||+++|+.|+++|.+|.+ |+.++++.+++
T Consensus 3 k~vlVtGasg--~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~ 44 (256)
T PRK08017 3 KSVLITGCSS--GIGLEAALELKRRGYRVLAACRKPDDVARMNS 44 (256)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh
Confidence 4799999998 9999999999999999988 88888776654
No 142
>PRK07814 short chain dehydrogenase; Provisional
Probab=94.71 E-value=0.072 Score=52.76 Aligned_cols=44 Identities=14% Similarity=0.243 Sum_probs=38.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
..+.|+++|++| -||+++|+.|.++|.+|.+ |+.++++++.+++
T Consensus 9 ~~~~vlItGasg--gIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l 54 (263)
T PRK07814 9 DDQVAVVTGAGR--GLGAAIALAFAEAGADVLIAARTESQLDEVAEQI 54 (263)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 456899999998 9999999999999999988 8888888777664
No 143
>PRK09135 pteridine reductase; Provisional
Probab=94.69 E-value=0.069 Score=51.55 Aligned_cols=43 Identities=21% Similarity=0.363 Sum_probs=35.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~ 397 (529)
.+.|+++|++| -||+.+|+.|+++|.+|.+ | ++++.+.+++++
T Consensus 6 ~~~vlItGa~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 51 (249)
T PRK09135 6 AKVALITGGAR--RIGAAIARTLHAAGYRVAIHYHRSAAEADALAAEL 51 (249)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 46799999998 9999999999999999988 4 455566665543
No 144
>PRK07062 short chain dehydrogenase; Provisional
Probab=94.65 E-value=0.043 Score=54.13 Aligned_cols=46 Identities=15% Similarity=0.161 Sum_probs=39.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
..+.++++|++| .||+++|+.|+++|.+|.+ |+.++++++.+++..
T Consensus 7 ~~k~~lItGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 54 (265)
T PRK07062 7 EGRVAVVTGGSS--GIGLATVELLLEAGASVAICGRDEERLASAEARLRE 54 (265)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh
Confidence 356899999998 9999999999999999988 888888887776543
No 145
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.65 E-value=0.077 Score=51.41 Aligned_cols=43 Identities=19% Similarity=0.339 Sum_probs=37.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
.+.|+|+|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 7 ~~~vlVtG~sg--~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~ 51 (239)
T PRK07666 7 GKNALITGAGR--GIGRAVAIALAKEGVNVGLLARTEENLKAVAEEV 51 (239)
T ss_pred CCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 36799999998 9999999999999999988 8888877776664
No 146
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.60 E-value=0.049 Score=56.42 Aligned_cols=147 Identities=22% Similarity=0.259 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh-
Q 009674 284 AINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS- 339 (529)
Q Consensus 284 ~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns- 339 (529)
+-+.-+...++.|++.|++.. -|. +++.+++||.|- |+.++.= |++++ .+=|||=+
T Consensus 45 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~ 124 (284)
T PRK14179 45 ASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHP 124 (284)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccCH
Confidence 444445666778888888764 344 233336777764 3444421 22233 12234433
Q ss_pred ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCc
Q 009674 340 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 398 (529)
Q Consensus 340 ---------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~ 398 (529)
-|++.|++=+ +-.-++|.++|..| -+|+.+|..|.++|..|++ .++.+
T Consensus 125 ~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~--ivG~Pla~lL~~~gatVtv~~s~t~--------- 193 (284)
T PRK14179 125 MNTGHLWSGRPVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSN--IVGKPMAQLLLDKNATVTLTHSRTR--------- 193 (284)
T ss_pred hhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cCcHHHHHHHHHCCCEEEEECCCCC---------
Confidence 3666666644 34678999999998 9999999999999999999 21111
Q ss_pred cccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCcee
Q 009674 399 VEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY 456 (529)
Q Consensus 399 ~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y 456 (529)
++++ ++++|+| +| +.++++. .++|+++||++ +.+. ++.-|+-+
T Consensus 194 -----------~l~~~~~~ADIVI~avg~~~~v~~~~---ik~GavVIDvg-in~~~~gkl~GDVdf 245 (284)
T PRK14179 194 -----------NLAEVARKADILVVAIGRGHFVTKEF---VKEGAVVIDVG-MNRDENGKLIGDVDF 245 (284)
T ss_pred -----------CHHHHHhhCCEEEEecCccccCCHHH---ccCCcEEEEec-ceecCCCCeecCccH
Confidence 2332 4556655 33 3455543 69999999999 6662 44455553
No 147
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.60 E-value=0.09 Score=50.74 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=36.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
.+.|+++|++| -||+++|+.|+++|..|.+ |+.++++++.+++
T Consensus 6 ~~~vlItGa~g--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~ 50 (245)
T PRK12936 6 GRKALVTGASG--GIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL 50 (245)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 46899999998 9999999999999999887 7777887776654
No 148
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.59 E-value=0.08 Score=52.94 Aligned_cols=44 Identities=25% Similarity=0.288 Sum_probs=37.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
+.+.|+|+|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++
T Consensus 9 ~~~~vlVtGa~g--~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~ 54 (274)
T PRK07775 9 DRRPALVAGASS--GIGAATAIELAAAGFPVALGARRVEKCEELVDKI 54 (274)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 346899999998 9999999999999999877 7777777666553
No 149
>PRK12829 short chain dehydrogenase; Provisional
Probab=94.59 E-value=0.053 Score=53.05 Aligned_cols=45 Identities=20% Similarity=0.420 Sum_probs=38.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
..++|+++|++| .||+++|+.|+++|.+|.+ |++++.++++++.+
T Consensus 10 ~~~~vlItGa~g--~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~ 56 (264)
T PRK12829 10 DGLRVLVTGGAS--GIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP 56 (264)
T ss_pred CCCEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 346899999998 9999999999999999988 88888887776654
No 150
>PRK06484 short chain dehydrogenase; Validated
Probab=94.53 E-value=0.082 Score=57.73 Aligned_cols=46 Identities=17% Similarity=0.184 Sum_probs=40.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
..+.++++|++| -||+++|+.|+++|.+|.+ |+++++++++++++.
T Consensus 268 ~~k~~lItGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 315 (520)
T PRK06484 268 SPRVVAITGGAR--GIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGD 315 (520)
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence 356899999998 9999999999999999998 888999988877643
No 151
>PRK05599 hypothetical protein; Provisional
Probab=94.53 E-value=0.062 Score=52.98 Aligned_cols=42 Identities=21% Similarity=0.369 Sum_probs=36.9
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
.|+++|+++ -||+++|+.|++ |.+|.+ |++++++++++++..
T Consensus 2 ~vlItGas~--GIG~aia~~l~~-g~~Vil~~r~~~~~~~~~~~l~~ 45 (246)
T PRK05599 2 SILILGGTS--DIAGEIATLLCH-GEDVVLAARRPEAAQGLASDLRQ 45 (246)
T ss_pred eEEEEeCcc--HHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHh
Confidence 589999997 999999999995 999999 999999988887643
No 152
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=94.50 E-value=0.1 Score=48.71 Aligned_cols=63 Identities=16% Similarity=0.218 Sum_probs=46.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc-cc------cccceeeec-cccc--CcceEEEE
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-VE------AQHNLVLST-SYAA--HKTKIWLV 421 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~-~~------~~~~l~~~~-~~~~--~~~~vwiv 421 (529)
+|.++|+- ..|.|+|..|+++|.+|+| |+++..+.|+++-. .. ...+ +.++ |+++ ++++++|+
T Consensus 1 KI~ViGaG---~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~-i~~t~dl~~a~~~ad~Iii 75 (157)
T PF01210_consen 1 KIAVIGAG---NWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPEN-IKATTDLEEALEDADIIII 75 (157)
T ss_dssp EEEEESSS---HHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETT-EEEESSHHHHHTT-SEEEE
T ss_pred CEEEECcC---HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcc-cccccCHHHHhCcccEEEe
Confidence 58899998 8999999999999999999 89999999987621 11 1123 3445 7874 77877664
No 153
>PRK07832 short chain dehydrogenase; Provisional
Probab=94.47 E-value=0.063 Score=53.45 Aligned_cols=43 Identities=14% Similarity=0.161 Sum_probs=36.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
+.++++|++| -||+++|+.|+++|.+|.+ |+.+..+++.+++.
T Consensus 1 k~vlItGas~--giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~ 45 (272)
T PRK07832 1 KRCFVTGAAS--GIGRATALRLAAQGAELFLTDRDADGLAQTVADAR 45 (272)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 3689999998 9999999999999999888 78888777766643
No 154
>PRK06057 short chain dehydrogenase; Provisional
Probab=94.47 E-value=0.062 Score=52.79 Aligned_cols=44 Identities=16% Similarity=0.122 Sum_probs=38.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++++++.
T Consensus 7 ~~~vlItGasg--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 52 (255)
T PRK06057 7 GRVAVITGGGS--GIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG 52 (255)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC
Confidence 36899999998 9999999999999999988 88888887777654
No 155
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=94.47 E-value=0.17 Score=55.27 Aligned_cols=138 Identities=14% Similarity=0.148 Sum_probs=86.1
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--Ec-
Q 009674 350 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG- 422 (529)
Q Consensus 350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg- 422 (529)
....++|+|+|. | .||+.+|+.|...|.+|++ +++.+....... +. ++.++++ ..++++| .|
T Consensus 209 ~l~Gk~VlViG~-G--~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~---G~-----~v~~l~eal~~aDVVI~aTG~ 277 (425)
T PRK05476 209 LIAGKVVVVAGY-G--DVGKGCAQRLRGLGARVIVTEVDPICALQAAMD---GF-----RVMTMEEAAELGDIFVTATGN 277 (425)
T ss_pred CCCCCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhc---CC-----EecCHHHHHhCCCEEEECCCC
Confidence 335678999997 5 9999999999999999999 455443322111 11 1223343 5667766 33
Q ss_pred -CcCChhhhhcCCCCceeecccccCcc--------------CCCCCceeecCCc---ccc--CCCCccccccccccCcch
Q 009674 423 -DDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCFYHSTPA---MII--PPSLSNMHSCENWLGRRV 482 (529)
Q Consensus 423 -~~~~~~~q~~a~~G~~f~~~~~~~~~--------------~~R~dc~y~~~~a---~~~--P~~~~~~~~~e~~~p~r~ 482 (529)
+.++.+....+++|++++-+..++.+ +.|+.+.-...|. +.+ -+..-|+- |..+.|..+
T Consensus 278 ~~vI~~~~~~~mK~GailiNvG~~d~Eid~~~L~~~~~~~~~v~~~v~~y~~~~g~~i~lLa~GrlvNl~-~~~ghp~~v 356 (425)
T PRK05476 278 KDVITAEHMEAMKDGAILANIGHFDNEIDVAALEELAVKWREIKPQVDEYTLPDGKRIILLAEGRLVNLG-AATGHPSEV 356 (425)
T ss_pred HHHHHHHHHhcCCCCCEEEEcCCCCCccChHHHhhcCcceeecCCCceEEEeCCCCEEEEEeCCcccccC-CCCCCccee
Confidence 35777888899999999998876642 2233332111111 111 12355566 889999999
Q ss_pred hHHHHHhhHhhhhcCCC
Q 009674 483 MSAWRIAGIIHALEGWD 499 (529)
Q Consensus 483 ~~Ac~a~~~v~alEgw~ 499 (529)
|.--+|.=.+-+++=|.
T Consensus 357 md~sfa~q~l~~~~l~~ 373 (425)
T PRK05476 357 MDMSFANQALAQIELFT 373 (425)
T ss_pred eCHHHHHHHHHHHHHHh
Confidence 97766655555555443
No 156
>PLN02253 xanthoxin dehydrogenase
Probab=94.44 E-value=0.082 Score=52.70 Aligned_cols=45 Identities=16% Similarity=0.163 Sum_probs=38.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.+..+++.+++..
T Consensus 18 ~k~~lItGas~--gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~ 64 (280)
T PLN02253 18 GKVALVTGGAT--GIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG 64 (280)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC
Confidence 46899999998 9999999999999999988 777777777777643
No 157
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.42 E-value=0.053 Score=56.15 Aligned_cols=43 Identities=21% Similarity=0.303 Sum_probs=37.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
.+-|+++||++ =||.++|..|+++|.++.+ |..+|++.+++++
T Consensus 12 ~kvVvITGASs--GIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l 56 (282)
T KOG1205|consen 12 GKVVLITGASS--GIGEALAYELAKRGAKLVLVARRARRLERVAEEL 56 (282)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHH
Confidence 56789999995 9999999999999999777 8888888886663
No 158
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=94.42 E-value=0.13 Score=53.32 Aligned_cols=168 Identities=17% Similarity=0.190 Sum_probs=90.2
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCC
Q 009674 273 IVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKT 352 (529)
Q Consensus 273 ~~~y~~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~i~~~ 352 (529)
|+--.+|.-.+++ +++.+.=..|++.| +-|-. ++.+|.+ .--| |||--...+.--..+...
T Consensus 63 G~nVTiP~K~~~~-~~~D~l~~~A~~iG-------AVNTv--~~~~g~l-~G~N--------TD~~Gf~~~l~~~~~~~~ 123 (288)
T PRK12749 63 GTGVSMPNKQLAC-EYVDELTPAAKLVG-------AINTI--VNDDGYL-RGYN--------TDGTGHIRAIKESGFDIK 123 (288)
T ss_pred EEEECcCCHHHHH-HHhccCCHHHHHhC-------ceeEE--EccCCEE-EEEe--------cCHHHHHHHHHhcCCCcC
Confidence 4455667644333 33555555566554 44542 1233321 2223 556555555543344444
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cch---hhHHHHHhhCccccccceeeeccc------c-c-CcceE
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICK---DDYEKLKLRIPVEAQHNLVLSTSY------A-A-HKTKI 418 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~---~~~~~l~~~~~~~~~~~l~~~~~~------~-~-~~~~v 418 (529)
.++|+|.||-| . ||||+..|++.|+ ++++ |++ ++.++|.+++....... +.+.++ + + .++++
T Consensus 124 ~k~vlvlGaGG--a-arAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~-~~~~~~~~~~~l~~~~~~aDi 199 (288)
T PRK12749 124 GKTMVLLGAGG--A-STAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCV-VTVTDLADQQAFAEALASADI 199 (288)
T ss_pred CCEEEEECCcH--H-HHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCce-EEEechhhhhhhhhhcccCCE
Confidence 56899999987 3 8999999998887 5666 773 58888888765433221 112222 2 2 35677
Q ss_pred EE----EcCcC--C---hhhhhcCCCCceeecccccCcc------CCC-CCceeecCCcccc
Q 009674 419 WL----VGDDL--T---GKEQARAPKGTIFIPYTQIPPR------KLR-KDCFYHSTPAMII 464 (529)
Q Consensus 419 wi----vg~~~--~---~~~q~~a~~G~~f~~~~~~~~~------~~R-~dc~y~~~~a~~~ 464 (529)
+| +|-.= + +.+....+++..+.|+. ..|. ..| +-|....+..|-+
T Consensus 200 vINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v-Y~P~~T~ll~~A~~~G~~~~~Gl~ML~ 260 (288)
T PRK12749 200 LTNGTKVGMKPLENESLVNDISLLHPGLLVTECV-YNPHMTKLLQQAQQAGCKTIDGYGMLL 260 (288)
T ss_pred EEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEec-CCCccCHHHHHHHHCCCeEECCHHHHH
Confidence 77 33210 0 01222346677777776 3333 112 4566666665543
No 159
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.41 E-value=0.17 Score=52.70 Aligned_cols=138 Identities=18% Similarity=0.257 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCccee----------eecCCh
Q 009674 283 EAINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKIK----------VVDGSS 339 (529)
Q Consensus 283 ~~in~~I~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~ir----------vv~Gns 339 (529)
.+-+.-+..-++.|++.|+++.-. . +++.++++|.|- ++.+..= |++++.+ =|||=+
T Consensus 43 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~ 122 (295)
T PRK14174 43 PASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFH 122 (295)
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccC
Confidence 345555677788999999987654 3 444557888884 3555522 3324321 133322
Q ss_pred ------------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhc----cCcEEEe--cchhhH
Q 009674 340 ------------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQ----MGIKVAT--ICKDDY 390 (529)
Q Consensus 340 ------------------ltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~----~~~~v~l--~~~~~~ 390 (529)
-|++.|++-+. -.-++|+++|... -||+-+|..|.+ ++..|++ .++.
T Consensus 123 ~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~~~~~atVt~~hs~t~-- 198 (295)
T PRK14174 123 PENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSN--IVGKPMANLMLQKLKESNCTVTICHSATK-- 198 (295)
T ss_pred hhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHhccccCCCEEEEEeCCch--
Confidence 57777776554 3578999999997 999999999986 7888888 2111
Q ss_pred HHHHhhCccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674 391 EKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 391 ~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 447 (529)
++++ +.+|++| +| +.++++.. ++|++++|++ ++.
T Consensus 199 -------------------~l~~~~~~ADIvI~Avg~~~li~~~~v---k~GavVIDVg-i~~ 238 (295)
T PRK14174 199 -------------------DIPSYTRQADILIAAIGKARFITADMV---KPGAVVIDVG-INR 238 (295)
T ss_pred -------------------hHHHHHHhCCEEEEecCccCccCHHHc---CCCCEEEEee-ccc
Confidence 1221 3556666 23 45677666 9999999998 654
No 160
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=94.41 E-value=0.096 Score=51.41 Aligned_cols=139 Identities=16% Similarity=0.167 Sum_probs=88.4
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-Cccccccceeeeccccc--CcceEEE--EcCcCCh
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPVEAQHNLVLSTSYAA--HKTKIWL--VGDDLTG 427 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~-~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~~~~ 427 (529)
+|+++||+| ++|+.++.-..+||.+|+- ||..+...+|.. +.+ ..+...+++.+ ...+++| .|.+...
T Consensus 2 KIaiIgAsG--~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q---~Difd~~~~a~~l~g~DaVIsA~~~~~~~ 76 (211)
T COG2910 2 KIAIIGASG--KAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQ---KDIFDLTSLASDLAGHDAVISAFGAGASD 76 (211)
T ss_pred eEEEEecCc--hhHHHHHHHHHhCCCeeEEEEeChHhccccccceeec---ccccChhhhHhhhcCCceEEEeccCCCCC
Confidence 689999999 9999999999999999998 999888654322 111 11111222221 3334444 4444333
Q ss_pred hhh-----------------------------hcCCCCceeecccccCcc-------------CCC----CCceeecCCc
Q 009674 428 KEQ-----------------------------ARAPKGTIFIPYTQIPPR-------------KLR----KDCFYHSTPA 461 (529)
Q Consensus 428 ~~q-----------------------------~~a~~G~~f~~~~~~~~~-------------~~R----~dc~y~~~~a 461 (529)
+|. .-+-+|+..+|.-+||.+ .+| -|-+|.+-++
T Consensus 77 ~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa 156 (211)
T COG2910 77 NDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAA 156 (211)
T ss_pred hhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcHH
Confidence 322 123456777777777753 122 5778999999
Q ss_pred cccCCCCcc--------ccccccccCcchhHHHHHhhHhhhhcCCC
Q 009674 462 MIIPPSLSN--------MHSCENWLGRRVMSAWRIAGIIHALEGWD 499 (529)
Q Consensus 462 ~~~P~~~~~--------~~~~e~~~p~r~~~Ac~a~~~v~alEgw~ 499 (529)
+-.|++=.| +- .|-.=..|-.+|=-|.+|+-++|.=.
T Consensus 157 ~f~PGerTg~yrlggD~ll-~n~~G~SrIS~aDYAiA~lDe~E~~~ 201 (211)
T COG2910 157 FFEPGERTGNYRLGGDQLL-VNAKGESRISYADYAIAVLDELEKPQ 201 (211)
T ss_pred hcCCccccCceEeccceEE-EcCCCceeeeHHHHHHHHHHHHhccc
Confidence 999974111 11 22223467888899999999999733
No 161
>PRK06182 short chain dehydrogenase; Validated
Probab=94.40 E-value=0.066 Score=53.27 Aligned_cols=41 Identities=24% Similarity=0.266 Sum_probs=35.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 395 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 395 (529)
.+.|+++|++| .||+++|+.|+++|.+|.+ |+.++++++.+
T Consensus 3 ~k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~l~~~~~ 45 (273)
T PRK06182 3 KKVALVTGASS--GIGKATARRLAAQGYTVYGAARRVDKMEDLAS 45 (273)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 36799999998 9999999999999999998 88888777654
No 162
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.39 E-value=0.11 Score=50.48 Aligned_cols=44 Identities=23% Similarity=0.323 Sum_probs=36.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~ 398 (529)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++.+.+.++++
T Consensus 5 ~k~ilItGas~--gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~ 51 (253)
T PRK08642 5 EQTVLVTGGSR--GLGAAIARAFAREGARVVVNYHQSEDAAEALADELG 51 (253)
T ss_pred CCEEEEeCCCC--cHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Confidence 36799999998 9999999999999999976 45666777766543
No 163
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=94.39 E-value=0.067 Score=56.74 Aligned_cols=138 Identities=17% Similarity=0.193 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHH---hcCc-CCCcEEEEec
Q 009674 285 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVV---NSLP-KTTAHVLLRG 360 (529)
Q Consensus 285 in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~---~~i~-~~~~~V~~~G 360 (529)
|=-+|.+|...|.+.|.-=-- ||. |-.. .+.+.|.-. -+.++-+|..=.++++. +..+ -+.++|+|+|
T Consensus 110 IlGQVK~Ay~~A~~~g~~g~~---L~~---lf~~-A~~~aKrVR-teT~I~~~~vSv~s~av~~~~~~~~l~~k~vLvIG 181 (338)
T PRK00676 110 IQGQVKRAYLKAARERKLPFA---LHF---LFQK-ALKEGKVFR-SKGGAPYAEVTIESVVQQELRRRQKSKKASLLFIG 181 (338)
T ss_pred HHHHHHHHHHHHHHcCCchHH---HHH---HHHH-HHHHHHHHh-hhcCCCCCCcCHHHHHHHHHHHhCCccCCEEEEEc
Confidence 334588999999998853111 121 1111 244444433 23444444332222233 3332 2578999999
Q ss_pred ccCchhhHHHHHHHHhccCcE-EEe--cchhh--HHHHH-hhCccccccceeeecccccCcceEEEEcC--------cCC
Q 009674 361 TVTANKVANAVASSLCQMGIK-VAT--ICKDD--YEKLK-LRIPVEAQHNLVLSTSYAAHKTKIWLVGD--------DLT 426 (529)
Q Consensus 361 atg~~kig~ava~~L~~~~~~-v~l--~~~~~--~~~l~-~~~~~~~~~~l~~~~~~~~~~~~vwivg~--------~~~ 426 (529)
| | ++|+-+|++|.++|++ +++ |+.++ |+.+. +.+.-. ..+||+|.+. .++
T Consensus 182 a-G--em~~l~a~~L~~~g~~~i~v~nRt~~~~~~~~~~~~~~~~~-------------~~~DvVIs~t~~Tas~~p~i~ 245 (338)
T PRK00676 182 Y-S--EINRKVAYYLQRQGYSRITFCSRQQLTLPYRTVVREELSFQ-------------DPYDVIFFGSSESAYAFPHLS 245 (338)
T ss_pred c-c--HHHHHHHHHHHHcCCCEEEEEcCCccccchhhhhhhhhhcc-------------cCCCEEEEcCCcCCCCCceee
Confidence 9 5 9999999999999854 666 55432 22211 000000 2446666542 445
Q ss_pred hhhhhcCCCCceeecccccCcc
Q 009674 427 GKEQARAPKGTIFIPYTQIPPR 448 (529)
Q Consensus 427 ~~~q~~a~~G~~f~~~~~~~~~ 448 (529)
.++....++ -.|+|.+ +|+.
T Consensus 246 ~~~~~~~~~-r~~iDLA-vPRd 265 (338)
T PRK00676 246 WESLADIPD-RIVFDFN-VPRT 265 (338)
T ss_pred HHHHhhccC-cEEEEec-CCCC
Confidence 555444443 4899999 7766
No 164
>PRK08862 short chain dehydrogenase; Provisional
Probab=94.37 E-value=0.056 Score=53.12 Aligned_cols=43 Identities=5% Similarity=0.156 Sum_probs=38.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
.+.++++|+++ -||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 5 ~k~~lVtGas~--GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i 49 (227)
T PRK08862 5 SSIILITSAGS--VLGRTISCHFARLGATLILCDQDQSALKDTYEQC 49 (227)
T ss_pred CeEEEEECCcc--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 46899999997 9999999999999999999 8999888877664
No 165
>PRK06181 short chain dehydrogenase; Provisional
Probab=94.37 E-value=0.092 Score=51.65 Aligned_cols=42 Identities=17% Similarity=0.287 Sum_probs=35.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
+.|+|+|++| .||+++|+.|+++|.+|++ |+.++.+++.+++
T Consensus 2 ~~vlVtGasg--~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l 45 (263)
T PRK06181 2 KVVIITGASE--GIGRALAVRLARAGAQLVLAARNETRLASLAQEL 45 (263)
T ss_pred CEEEEecCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4689999998 9999999999999999998 7777777666554
No 166
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=94.36 E-value=0.071 Score=47.59 Aligned_cols=98 Identities=11% Similarity=0.106 Sum_probs=54.1
Q ss_pred EEEEecccCchhhHHHHHHHHh-ccCcEEEe---cchhhHHHHHhhCccccccceeeecc--ccc-CcceEEE--EcCcC
Q 009674 355 HVLLRGTVTANKVANAVASSLC-QMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTS--YAA-HKTKIWL--VGDDL 425 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~-~~~~~v~l---~~~~~~~~l~~~~~~~~~~~l~~~~~--~~~-~~~~vwi--vg~~~ 425 (529)
+|+++|||| -+|+.+++.|. .....+.. ++++.-+.+....+.-.+..-+.+.+ .++ .++++++ .++..
T Consensus 1 rV~IvGAtG--~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~ 78 (121)
T PF01118_consen 1 RVAIVGATG--YVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGA 78 (121)
T ss_dssp EEEEESTTS--HHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHH
T ss_pred CEEEECCCC--HHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhH
Confidence 589999999 99999999999 55666555 33312233333322111111122333 223 6778866 33332
Q ss_pred Chhh-hhcCCCCceeecccccCcc-CCCCCceee
Q 009674 426 TGKE-QARAPKGTIFIPYTQIPPR-KLRKDCFYH 457 (529)
Q Consensus 426 ~~~~-q~~a~~G~~f~~~~~~~~~-~~R~dc~y~ 457 (529)
+.+- ..-+++|..++|.| .. .+.+||.|.
T Consensus 79 ~~~~~~~~~~~g~~ViD~s---~~~R~~~~~~~~ 109 (121)
T PF01118_consen 79 SKELAPKLLKAGIKVIDLS---GDFRLDDDVPYG 109 (121)
T ss_dssp HHHHHHHHHHTTSEEEESS---STTTTSTTSEEE
T ss_pred HHHHHHHHhhCCcEEEeCC---HHHhCCCCCCEE
Confidence 2222 22248999888887 22 333566664
No 167
>PRK07576 short chain dehydrogenase; Provisional
Probab=94.35 E-value=0.099 Score=51.99 Aligned_cols=44 Identities=14% Similarity=0.288 Sum_probs=37.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 8 ~~k~ilItGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 53 (264)
T PRK07576 8 AGKNVVVVGGTS--GINLGIAQAFARAGANVAVASRSQEKVDAAVAQL 53 (264)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 456899999998 9999999999999999988 7888777665554
No 168
>PRK05875 short chain dehydrogenase; Provisional
Probab=94.34 E-value=0.067 Score=53.08 Aligned_cols=44 Identities=20% Similarity=0.222 Sum_probs=37.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
..+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+.+++++
T Consensus 6 ~~k~vlItGasg--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l 51 (276)
T PRK05875 6 QDRTYLVTGGGS--GIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEI 51 (276)
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 357899999998 9999999999999999998 7777777766654
No 169
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.33 E-value=0.09 Score=50.40 Aligned_cols=41 Identities=22% Similarity=0.266 Sum_probs=33.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 396 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~ 396 (529)
++|+++|++| .||+++|+.|+++|.+|++ ++.++.+.+.++
T Consensus 7 ~~vlItGasg--~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~ 50 (249)
T PRK12825 7 RVALVTGAAR--GLGRAIALRLARAGADVVVHYRSDEEAAEELVEA 50 (249)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence 5899999998 9999999999999999876 445555555554
No 170
>PRK12828 short chain dehydrogenase; Provisional
Probab=94.32 E-value=0.066 Score=51.22 Aligned_cols=42 Identities=19% Similarity=0.119 Sum_probs=34.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 396 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 396 (529)
.+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.++..++
T Consensus 7 ~k~vlItGatg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~ 50 (239)
T PRK12828 7 GKVVAITGGFG--GLGRATAAWLAARGARVALIGRGAAPLSQTLPG 50 (239)
T ss_pred CCEEEEECCCC--cHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHH
Confidence 45799999998 9999999999999999888 766665544333
No 171
>PRK12742 oxidoreductase; Provisional
Probab=94.28 E-value=0.073 Score=51.30 Aligned_cols=44 Identities=23% Similarity=0.240 Sum_probs=36.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~ 398 (529)
.+.|+++|++| -||+++|+.|.++|.+|.+ +++++.+++.++++
T Consensus 6 ~k~vlItGasg--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~ 52 (237)
T PRK12742 6 GKKVLVLGGSR--GIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETG 52 (237)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhC
Confidence 46899999998 9999999999999999876 46677777766543
No 172
>PRK08703 short chain dehydrogenase; Provisional
Probab=94.27 E-value=0.061 Score=52.21 Aligned_cols=44 Identities=20% Similarity=0.250 Sum_probs=38.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+.+.+++.
T Consensus 6 ~k~vlItG~sg--giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~ 51 (239)
T PRK08703 6 DKTILVTGASQ--GLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIV 51 (239)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHH
Confidence 36899999998 9999999999999999998 88888888777653
No 173
>PRK07806 short chain dehydrogenase; Provisional
Probab=94.26 E-value=0.098 Score=50.88 Aligned_cols=43 Identities=21% Similarity=0.224 Sum_probs=34.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~~ 397 (529)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+. ++.+++.+++
T Consensus 6 ~k~vlItGasg--giG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l 51 (248)
T PRK07806 6 GKTALVTGSSR--GIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEI 51 (248)
T ss_pred CcEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHH
Confidence 36799999998 9999999999999999877 654 4556555543
No 174
>PLN00198 anthocyanidin reductase; Provisional
Probab=94.25 E-value=0.098 Score=53.89 Aligned_cols=42 Identities=21% Similarity=0.184 Sum_probs=34.2
Q ss_pred CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 009674 349 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 392 (529)
Q Consensus 349 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~ 392 (529)
.|...++|+++|++| -||+.+++.|.++|.+|.. |+.+....
T Consensus 5 ~~~~~~~vlItG~~G--fIG~~l~~~L~~~g~~V~~~~r~~~~~~~ 48 (338)
T PLN00198 5 TPTGKKTACVIGGTG--FLASLLIKLLLQKGYAVNTTVRDPENQKK 48 (338)
T ss_pred cCCCCCeEEEECCch--HHHHHHHHHHHHCCCEEEEEECCCCCHHH
Confidence 366678899999999 9999999999999999854 66554443
No 175
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=94.24 E-value=0.12 Score=53.31 Aligned_cols=44 Identities=16% Similarity=0.117 Sum_probs=38.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.|+++|+++ -||+++|+.|+++| .+|.+ |++++.+++++++.
T Consensus 3 ~k~vlITGas~--GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~ 49 (314)
T TIGR01289 3 KPTVIITGASS--GLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLG 49 (314)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence 45889999997 99999999999999 99888 88888888887764
No 176
>PLN02583 cinnamoyl-CoA reductase
Probab=94.18 E-value=0.13 Score=52.30 Aligned_cols=31 Identities=16% Similarity=0.111 Sum_probs=28.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
..+.|+|+|++| -||+++++.|.++|.+|..
T Consensus 5 ~~k~vlVTGatG--~IG~~lv~~Ll~~G~~V~~ 35 (297)
T PLN02583 5 SSKSVCVMDASG--YVGFWLVKRLLSRGYTVHA 35 (297)
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence 356899999999 9999999999999999987
No 177
>PRK08628 short chain dehydrogenase; Provisional
Probab=94.17 E-value=0.1 Score=51.13 Aligned_cols=42 Identities=14% Similarity=0.189 Sum_probs=34.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 396 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 396 (529)
..+.++++||+| -||+++|+.|+++|.+|.+ |+++.. ++.++
T Consensus 6 ~~~~ilItGasg--giG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~ 49 (258)
T PRK08628 6 KDKVVIVTGGAS--GIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEE 49 (258)
T ss_pred CCCEEEEeCCCC--hHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHH
Confidence 456899999998 9999999999999999988 666655 44344
No 178
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=94.14 E-value=0.13 Score=53.95 Aligned_cols=117 Identities=15% Similarity=0.086 Sum_probs=75.4
Q ss_pred ceeeecCCCCcc--eee-ecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHHHHHHHHh-ccCc-EEEe--
Q 009674 320 EIYLERQPNKLK--IKV-VDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVANAVASSLC-QMGI-KVAT-- 384 (529)
Q Consensus 320 ~~~~~k~p~~L~--irv-v~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig~ava~~L~-~~~~-~v~l-- 384 (529)
+..+.-.|+ -. ..+ .||+.+|+ ++....+ +++.++|.++|+- ..|++.+++|+ .+++ +|.+
T Consensus 86 g~i~l~d~~-tG~~~ai~~d~~~lT~~RTaa~~~laa~~la~~~~~~v~iiGaG---~qA~~~~~al~~~~~i~~v~V~~ 161 (326)
T TIGR02992 86 GMMVLLSSR-TGLLQALLLDNGYLTDVRTAAAGAVAARHLAREDSSVVAIFGAG---MQARLQLEALTLVRDIRSARIWA 161 (326)
T ss_pred EEEEEEECC-CCCceEEEcCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCC---HHHHHHHHHHHHhCCccEEEEEC
Confidence 355555554 22 344 47877764 1222222 5677899999996 79999999998 4664 4666
Q ss_pred cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcC-----cCChhhhhcCCCCceeeccc
Q 009674 385 ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD-----DLTGKEQARAPKGTIFIPYT 443 (529)
Q Consensus 385 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~-----~~~~~~q~~a~~G~~f~~~~ 443 (529)
|+.++.+++.+++..+.+.......++++ ++++|++.-. .++++. .++|+++..+.
T Consensus 162 R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~p~i~~~~---l~~g~~i~~vg 224 (326)
T TIGR02992 162 RDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSETPILHAEW---LEPGQHVTAMG 224 (326)
T ss_pred CCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCCcEecHHH---cCCCcEEEeeC
Confidence 99999999988875443333122336664 7788877322 244444 48999988775
No 179
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=94.11 E-value=0.083 Score=53.57 Aligned_cols=34 Identities=24% Similarity=0.204 Sum_probs=29.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 389 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~ 389 (529)
++|+|+|+|| -||+.+++.|.++|.+|.. |+.++
T Consensus 5 ~~ilVtGatG--fIG~~l~~~L~~~g~~V~~~~r~~~~ 40 (322)
T PLN02662 5 KVVCVTGASG--YIASWLVKLLLQRGYTVKATVRDPND 40 (322)
T ss_pred CEEEEECChH--HHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 6899999999 9999999999999999876 66554
No 180
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=94.10 E-value=0.12 Score=53.52 Aligned_cols=42 Identities=14% Similarity=0.107 Sum_probs=33.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccC--cEEEe--cchhhHHHHHhhC
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~--~~v~l--~~~~~~~~l~~~~ 397 (529)
+.|+|+|++| -||+++++.|+++| .+|.+ |+..+.+++++++
T Consensus 5 k~vLVTGatG--~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~ 50 (324)
T TIGR03589 5 KSILITGGTG--SFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF 50 (324)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh
Confidence 5799999999 99999999999876 67776 6665555665554
No 181
>PRK08263 short chain dehydrogenase; Provisional
Probab=94.08 E-value=0.085 Score=52.62 Aligned_cols=43 Identities=12% Similarity=0.079 Sum_probs=37.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
+.|+++|++| -||+++|+.|.++|.+|.+ |+.+++++++++.+
T Consensus 4 k~vlItGasg--~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~ 48 (275)
T PRK08263 4 KVWFITGASR--GFGRAWTEAALERGDRVVATARDTATLADLAEKYG 48 (275)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcc
Confidence 5799999998 9999999999999999888 88888888876653
No 182
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.08 E-value=0.095 Score=53.99 Aligned_cols=43 Identities=16% Similarity=0.175 Sum_probs=35.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc----------hhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC----------KDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~----------~~~~~~l~~~~ 397 (529)
.+.|+++|+++ -||+++|+.|+++|.+|.+ |+ +++.+++++++
T Consensus 8 ~k~~lITGgs~--GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l 62 (305)
T PRK08303 8 GKVALVAGATR--GAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELV 62 (305)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHH
Confidence 46899999997 8999999999999999988 65 35666666554
No 183
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=94.04 E-value=0.086 Score=50.64 Aligned_cols=39 Identities=18% Similarity=0.333 Sum_probs=31.9
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 396 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 396 (529)
+|.|+|+ | .+|+.+|..+++.|.+|.+ ++++.+++.+++
T Consensus 1 ~V~ViGa-G--~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~ 41 (180)
T PF02737_consen 1 KVAVIGA-G--TMGRGIAALFARAGYEVTLYDRSPEALERARKR 41 (180)
T ss_dssp EEEEES--S--HHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHH
T ss_pred CEEEEcC-C--HHHHHHHHHHHhCCCcEEEEECChHHHHhhhhH
Confidence 5899999 5 9999999999999999999 777766655444
No 184
>PRK08177 short chain dehydrogenase; Provisional
Probab=94.04 E-value=0.073 Score=51.40 Aligned_cols=40 Identities=15% Similarity=0.183 Sum_probs=34.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 395 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 395 (529)
+.|+++|++| .||+++|+.|+++|.+|++ |+.++.+++++
T Consensus 2 k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 43 (225)
T PRK08177 2 RTALIIGASR--GLGLGLVDRLLERGWQVTATVRGPQQDTALQA 43 (225)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh
Confidence 5799999998 9999999999999999998 77777666643
No 185
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=93.97 E-value=0.058 Score=56.39 Aligned_cols=68 Identities=19% Similarity=0.315 Sum_probs=46.5
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcccc---ccceeeeccccc-CcceEEEE
Q 009674 351 KTTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA---QHNLVLSTSYAA-HKTKIWLV 421 (529)
Q Consensus 351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~~---~~~l~~~~~~~~-~~~~vwiv 421 (529)
|...+|.++|| | .||+++|..|+.+|+ ++.| +++++++-...++.... ...-+...++++ ++++|+|+
T Consensus 4 ~~~~ki~iiGa-G--~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIi 79 (315)
T PRK00066 4 KQHNKVVLVGD-G--AVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVI 79 (315)
T ss_pred CCCCEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEE
Confidence 33459999999 8 999999999998888 5666 66777665555433221 111123337777 89988775
No 186
>PRK07904 short chain dehydrogenase; Provisional
Probab=93.96 E-value=0.098 Score=51.96 Aligned_cols=45 Identities=13% Similarity=0.222 Sum_probs=36.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhh-HHHHHhhCcc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDD-YEKLKLRIPV 399 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~-~~~l~~~~~~ 399 (529)
.+.|+++|++| -||+++|+.|+++| .+|.+ |+.++ ++++.+++..
T Consensus 8 ~~~vlItGas~--giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~ 56 (253)
T PRK07904 8 PQTILLLGGTS--EIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKA 56 (253)
T ss_pred CcEEEEEcCCc--HHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHh
Confidence 34799999998 99999999999885 89888 87775 7777666533
No 187
>PRK07035 short chain dehydrogenase; Provisional
Probab=93.95 E-value=0.089 Score=51.39 Aligned_cols=44 Identities=23% Similarity=0.228 Sum_probs=38.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++.
T Consensus 8 ~k~vlItGas~--gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~ 53 (252)
T PRK07035 8 GKIALVTGASR--GIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIV 53 (252)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 88888888777653
No 188
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=93.91 E-value=0.071 Score=52.02 Aligned_cols=45 Identities=16% Similarity=0.200 Sum_probs=38.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 11 ~~k~vlItG~~g--~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~ 57 (247)
T PRK08945 11 KDRIILVTGAGD--GIGREAALTYARHGATVILLGRTEEKLEAVYDEIE 57 (247)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHH
Confidence 456899999998 9999999999999999988 88777777766644
No 189
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.91 E-value=0.12 Score=53.70 Aligned_cols=148 Identities=22% Similarity=0.262 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC-
Q 009674 283 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS- 338 (529)
Q Consensus 283 ~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn- 338 (529)
.+-+.-+....+.|++.|++..- |. +++.++++|.|- |+.+..= |++++. +=|||=
T Consensus 44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~ 123 (284)
T PRK14190 44 PASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDGFH 123 (284)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccC
Confidence 34455566777889999998754 44 334447788885 3555422 332431 123332
Q ss_pred ---------------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674 339 ---------------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 397 (529)
Q Consensus 339 ---------------sltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~ 397 (529)
.-|+..|++=+ +-.-++|+|+|.+. -||+-+|..|.++|-.|++ .++. .
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~atVt~chs~t--~------ 193 (284)
T PRK14190 124 PINVGRMMLGQDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSN--IVGKPVGQLLLNENATVTYCHSKT--K------ 193 (284)
T ss_pred HhhHHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEEeCCc--h------
Confidence 23666666543 44688999999998 9999999999999999998 2111 1
Q ss_pred ccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCcee
Q 009674 398 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY 456 (529)
Q Consensus 398 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y 456 (529)
++++ +.+||+| +| +.++++.. ++|+++||+. +++. ++--|+-+
T Consensus 194 ------------~l~~~~~~ADIvI~AvG~p~~i~~~~i---k~gavVIDvG-i~~~~~gkl~GDvd~ 245 (284)
T PRK14190 194 ------------NLAELTKQADILIVAVGKPKLITADMV---KEGAVVIDVG-VNRLENGKLCGDVDF 245 (284)
T ss_pred ------------hHHHHHHhCCEEEEecCCCCcCCHHHc---CCCCEEEEee-ccccCCCCeeccCcH
Confidence 2322 3556655 33 35777777 9999999998 6652 44455553
No 190
>PRK09134 short chain dehydrogenase; Provisional
Probab=93.91 E-value=0.14 Score=50.34 Aligned_cols=44 Identities=27% Similarity=0.437 Sum_probs=35.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 397 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 397 (529)
..+.|+++|++| -||+++|+.|+++|.+|.+ ++.++.+.+.+++
T Consensus 8 ~~k~vlItGas~--giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 54 (258)
T PRK09134 8 APRAALVTGAAR--RIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEI 54 (258)
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 346899999998 9999999999999999976 4556666665553
No 191
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=93.91 E-value=0.23 Score=51.33 Aligned_cols=63 Identities=21% Similarity=0.159 Sum_probs=45.9
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCccc
Q 009674 335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVE 400 (529)
Q Consensus 335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~~~~~ 400 (529)
|||.-...+.--+..+...++|++.||-| .|||++-.|++.|++ +.+ |+.+|-++|.+++...
T Consensus 109 TD~~Gf~~~L~~~~~~~~~k~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~ 174 (283)
T PRK14027 109 TDVSGFGRGMEEGLPNAKLDSVVQVGAGG---VGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA 174 (283)
T ss_pred CCHHHHHHHHHhcCcCcCCCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc
Confidence 66666655553222233457899999986 589999999999974 555 8999999998876543
No 192
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=93.90 E-value=0.18 Score=51.89 Aligned_cols=120 Identities=18% Similarity=0.170 Sum_probs=69.9
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCccccccceeeeccc
Q 009674 335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY 411 (529)
Q Consensus 335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~ 411 (529)
|||-....+.--..++. .++|++.||-| .|||++.+|.+.|++ +.+ |+.++-++|.+++..+... ++
T Consensus 105 TD~~Gf~~~L~~~~~~~-~~~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~~~------~~ 174 (272)
T PRK12550 105 TDYIAIAKLLASYQVPP-DLVVALRGSGG---MAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEWRP------DL 174 (272)
T ss_pred cCHHHHHHHHHhcCCCC-CCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcchh------hc
Confidence 66666655543333433 35899999976 589999999998975 777 9999999998875422210 11
Q ss_pred ccCcceEEE----EcCc--C----ChhhhhcCCCCceeecccccCcc-----CCC-CCceeecCCcccc
Q 009674 412 AAHKTKIWL----VGDD--L----TGKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII 464 (529)
Q Consensus 412 ~~~~~~vwi----vg~~--~----~~~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~ 464 (529)
....++++| +|-. . .|-+....+++..+.|..--|++ +.| +-|.+..+..|-+
T Consensus 175 ~~~~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~~T~ll~~A~~~G~~~i~Gl~MLi 243 (272)
T PRK12550 175 GGIEADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALPAETPLIRYARARGKTVITGAEVIA 243 (272)
T ss_pred ccccCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecCCccCHHHHHHHHCcCeEeCCHHHHH
Confidence 112345555 2211 0 01112234667777777733332 222 5566666666644
No 193
>PRK06197 short chain dehydrogenase; Provisional
Probab=93.89 E-value=0.077 Score=53.95 Aligned_cols=44 Identities=20% Similarity=0.201 Sum_probs=36.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.++..+++
T Consensus 15 ~~k~vlItGas~--gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l 60 (306)
T PRK06197 15 SGRVAVVTGANT--GLGYETAAALAAKGAHVVLAVRNLDKGKAAAARI 60 (306)
T ss_pred CCCEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 457899999998 9999999999999999877 8877766554443
No 194
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.88 E-value=0.094 Score=50.56 Aligned_cols=42 Identities=19% Similarity=0.233 Sum_probs=37.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 6 ~~vlItGa~g--~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (238)
T PRK05786 6 KKVAIIGVSE--GLGYAVAYFALKEGAQVCINSRNENKLKRMKKTL 49 (238)
T ss_pred cEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 5899999998 9999999999999999998 8888887775554
No 195
>PRK05693 short chain dehydrogenase; Provisional
Probab=93.83 E-value=0.093 Score=52.21 Aligned_cols=41 Identities=24% Similarity=0.306 Sum_probs=35.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 396 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 396 (529)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+.++++
T Consensus 2 k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 44 (274)
T PRK05693 2 PVVLITGCSS--GIGRALADAFKAAGYEVWATARKAEDVEALAAA 44 (274)
T ss_pred CEEEEecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC
Confidence 4789999998 9999999999999999988 888887777543
No 196
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=93.82 E-value=0.1 Score=51.84 Aligned_cols=44 Identities=16% Similarity=0.290 Sum_probs=36.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV 399 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~ 399 (529)
..|+++|++| -||+++|+.|+++|.+|.+ +++++++.+.+++..
T Consensus 2 ~~~lITGas~--gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~ 48 (267)
T TIGR02685 2 PAAVVTGAAK--RIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNA 48 (267)
T ss_pred CEEEEeCCCC--cHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHh
Confidence 4689999998 8999999999999999988 456778777766543
No 197
>PLN02427 UDP-apiose/xylose synthase
Probab=93.82 E-value=0.14 Score=53.94 Aligned_cols=43 Identities=16% Similarity=0.210 Sum_probs=33.8
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHH
Q 009674 350 PKTTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLK 394 (529)
Q Consensus 350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~~~~l~ 394 (529)
|-...+|+|+|+|| =||+.+++.|.++ |.+|.. |+.++.+.+.
T Consensus 11 ~~~~~~VlVTGgtG--fIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~ 56 (386)
T PLN02427 11 PIKPLTICMIGAGG--FIGSHLCEKLMTETPHKVLALDVYNDKIKHLL 56 (386)
T ss_pred cccCcEEEEECCcc--hHHHHHHHHHHhcCCCEEEEEecCchhhhhhh
Confidence 44566899999999 9999999999987 588876 5555555443
No 198
>PRK06953 short chain dehydrogenase; Provisional
Probab=93.81 E-value=0.091 Score=50.61 Aligned_cols=40 Identities=15% Similarity=0.161 Sum_probs=35.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 395 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 395 (529)
+.|+|+|++| .||+++|+.|+++|.+|.+ |+.++.+++++
T Consensus 2 ~~vlvtG~sg--~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~ 43 (222)
T PRK06953 2 KTVLIVGASR--GIGREFVRQYRADGWRVIATARDAAALAALQA 43 (222)
T ss_pred ceEEEEcCCC--chhHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence 4689999998 9999999999999999988 77777777764
No 199
>PRK06914 short chain dehydrogenase; Provisional
Probab=93.80 E-value=0.099 Score=52.00 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=36.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
+.++++|++| -||+++|+.|.++|.+|.+ |+.++.+++++++
T Consensus 4 k~~lItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 47 (280)
T PRK06914 4 KIAIVTGASS--GFGLLTTLELAKKGYLVIATMRNPEKQENLLSQA 47 (280)
T ss_pred CEEEEECCCc--hHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHH
Confidence 5689999998 9999999999999999988 8888887776653
No 200
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.78 E-value=0.39 Score=50.11 Aligned_cols=140 Identities=15% Similarity=0.209 Sum_probs=90.2
Q ss_pred hHHHHHHHHHHHHHHHHcCCcE--EEeccccc-------ccccccCC---ceeeecC-CCCcce----------eeecCC
Q 009674 282 REAINSLIEEAILEADAKGVKV--ISLGLLNQ-------GEELNRNG---EIYLERQ-PNKLKI----------KVVDGS 338 (529)
Q Consensus 282 ~~~in~~I~~Ai~~A~k~G~kv--~~LG~ln~-------~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn 338 (529)
..+-+.-+....+.|++.|++. .-|..-.+ ++++|.|- ++.++.= |++++. +=|||=
T Consensus 42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl 121 (293)
T PRK14185 42 DGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGF 121 (293)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcCCC
Confidence 3445555667788999999998 45554332 25788874 3555532 333432 123332
Q ss_pred h----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHHH
Q 009674 339 S----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEK 392 (529)
Q Consensus 339 s----------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~l-~~~~~~~~ 392 (529)
+ -|++.|++=+ +-.-++|+++|... -||+-+|..|.++ +..|++ .++-
T Consensus 122 ~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~--iVGkPla~lL~~~~~~~~aTVtvchs~T---- 195 (293)
T PRK14185 122 HPINVGRMSIGLPCFVSATPNGILELLKRYHIETSGKKCVVLGRSN--IVGKPMAQLMMQKAYPGDCTVTVCHSRS---- 195 (293)
T ss_pred CHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHcCCCCCCCEEEEecCCC----
Confidence 2 2677776644 44678999999997 9999999999987 678888 2111
Q ss_pred HHhhCccccccceeeeccccc--CcceEEE--EcC--cCChhhhhcCCCCceeecccccCc
Q 009674 393 LKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 393 l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 447 (529)
.++++ +.+||+| +|+ .++++.. ++|+++||+. +.+
T Consensus 196 ----------------~nl~~~~~~ADIvIsAvGkp~~i~~~~v---k~gavVIDvG-in~ 236 (293)
T PRK14185 196 ----------------KNLKKECLEADIIIAALGQPEFVKADMV---KEGAVVIDVG-TTR 236 (293)
T ss_pred ----------------CCHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-Ccc
Confidence 12332 3566766 443 4676655 9999999998 654
No 201
>PLN02650 dihydroflavonol-4-reductase
Probab=93.76 E-value=0.13 Score=53.43 Aligned_cols=42 Identities=17% Similarity=0.163 Sum_probs=34.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 395 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 395 (529)
..++|+|+|++| -||+++++.|.++|.+|.. |+.++.+.++.
T Consensus 4 ~~k~iLVTGatG--fIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~ 47 (351)
T PLN02650 4 QKETVCVTGASG--FIGSWLVMRLLERGYTVRATVRDPANVKKVKH 47 (351)
T ss_pred CCCEEEEeCCcH--HHHHHHHHHHHHCCCEEEEEEcCcchhHHHHH
Confidence 356899999999 9999999999999999976 66666555443
No 202
>PRK08278 short chain dehydrogenase; Provisional
Probab=93.74 E-value=0.11 Score=51.90 Aligned_cols=34 Identities=12% Similarity=0.221 Sum_probs=29.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 388 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~ 388 (529)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.+
T Consensus 6 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (273)
T PRK08278 6 GKTLFITGASR--GIGLAIALRAARDGANIVIAAKTAE 41 (273)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecccc
Confidence 36799999998 9999999999999999988 5543
No 203
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=93.73 E-value=0.13 Score=49.03 Aligned_cols=86 Identities=16% Similarity=0.157 Sum_probs=58.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE------
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------ 421 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------ 421 (529)
..++|.++|.- .||+++|+.|..-|.+|.. |+.+.-+.... .. +...++++ +.++++++
T Consensus 35 ~g~tvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-~~-------~~~~~l~ell~~aDiv~~~~plt~ 103 (178)
T PF02826_consen 35 RGKTVGIIGYG---RIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-FG-------VEYVSLDELLAQADIVSLHLPLTP 103 (178)
T ss_dssp TTSEEEEESTS---HHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-TT-------EEESSHHHHHHH-SEEEE-SSSST
T ss_pred CCCEEEEEEEc---CCcCeEeeeeecCCceeEEecccCChhhhccc-cc-------ceeeehhhhcchhhhhhhhhcccc
Confidence 46789999985 9999999999999999999 43333221111 11 12335554 55666541
Q ss_pred --cCcCChhhhhcCCCCceeecccc---cCcc
Q 009674 422 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR 448 (529)
Q Consensus 422 --g~~~~~~~q~~a~~G~~f~~~~~---~~~~ 448 (529)
-..|+.++..+||+|++|+-++| |+.+
T Consensus 104 ~T~~li~~~~l~~mk~ga~lvN~aRG~~vde~ 135 (178)
T PF02826_consen 104 ETRGLINAEFLAKMKPGAVLVNVARGELVDED 135 (178)
T ss_dssp TTTTSBSHHHHHTSTTTEEEEESSSGGGB-HH
T ss_pred ccceeeeeeeeeccccceEEEeccchhhhhhh
Confidence 35688899999999999999999 5554
No 204
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=93.73 E-value=0.14 Score=49.89 Aligned_cols=31 Identities=19% Similarity=0.333 Sum_probs=28.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
..+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 4 ~~k~vlItGas~--gIG~~ia~~l~~~G~~vi~ 34 (248)
T TIGR01832 4 EGKVALVTGANT--GLGQGIAVGLAEAGADIVG 34 (248)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence 346899999998 9999999999999999998
No 205
>PRK12937 short chain dehydrogenase; Provisional
Probab=93.68 E-value=0.16 Score=49.04 Aligned_cols=43 Identities=21% Similarity=0.297 Sum_probs=33.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~ 397 (529)
.+.|+++|++| -||+++|+.|+++|.++++ + ++++.+++.+++
T Consensus 5 ~~~vlItG~~~--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 50 (245)
T PRK12937 5 NKVAIVTGASR--GIGAAIARRLAADGFAVAVNYAGSAAAADELVAEI 50 (245)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999877 3 344455554443
No 206
>PRK07060 short chain dehydrogenase; Provisional
Probab=93.68 E-value=0.13 Score=49.74 Aligned_cols=44 Identities=23% Similarity=0.316 Sum_probs=38.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
..+.++++|++| -||+++|+.|.++|.+|.+ |+.++.+++.++.
T Consensus 8 ~~~~~lItGa~g--~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~ 53 (245)
T PRK07060 8 SGKSVLVTGASS--GIGRACAVALAQRGARVVAAARNAAALDRLAGET 53 (245)
T ss_pred CCCEEEEeCCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 446899999998 9999999999999999988 8888888777664
No 207
>PRK12827 short chain dehydrogenase; Provisional
Probab=93.67 E-value=0.16 Score=48.99 Aligned_cols=43 Identities=21% Similarity=0.291 Sum_probs=34.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe------cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT------ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l------~~~~~~~~l~~~~ 397 (529)
.+.++++|++| -||+++|+.|+++|.+|.+ ++++..+++.+++
T Consensus 6 ~~~ilItGasg--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 54 (249)
T PRK12827 6 SRRVLITGGSG--GLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGI 54 (249)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHH
Confidence 36799999998 9999999999999999877 3455666665554
No 208
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.67 E-value=0.073 Score=54.72 Aligned_cols=88 Identities=15% Similarity=0.141 Sum_probs=56.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc-------------cc---ccceeeec-cccc-
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV-------------EA---QHNLVLST-SYAA- 413 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~-------------~~---~~~l~~~~-~~~~- 413 (529)
++|.|+|+- .+|+.+|..|++.|.+|++ ++++.++..++++.. +. ....+..+ ++++
T Consensus 6 ~~V~ViGaG---~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 82 (286)
T PRK07819 6 QRVGVVGAG---QMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDLGDF 82 (286)
T ss_pred cEEEEEccc---HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCHHHh
Confidence 579999995 9999999999999999999 788877763322111 10 01112233 7765
Q ss_pred CcceEEE--EcCcCChh-----hhhcC--CCCceeecccc
Q 009674 414 HKTKIWL--VGDDLTGK-----EQARA--PKGTIFIPYTQ 444 (529)
Q Consensus 414 ~~~~vwi--vg~~~~~~-----~q~~a--~~G~~f~~~~~ 444 (529)
++++++| |-+.++-+ +..++ ++|++++.-+-
T Consensus 83 ~~~d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snTS 122 (286)
T PRK07819 83 ADRQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNTS 122 (286)
T ss_pred CCCCEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence 7887766 32322222 12243 88999987665
No 209
>PRK09242 tropinone reductase; Provisional
Probab=93.66 E-value=0.095 Score=51.46 Aligned_cols=44 Identities=16% Similarity=0.228 Sum_probs=38.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 9 ~k~~lItGa~~--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~ 54 (257)
T PRK09242 9 GQTALITGASK--GIGLAIAREFLGLGADVLIVARDADALAQARDELA 54 (257)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 88888888777643
No 210
>PRK07985 oxidoreductase; Provisional
Probab=93.65 E-value=0.13 Score=52.38 Aligned_cols=42 Identities=21% Similarity=0.296 Sum_probs=33.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc--hhhHHHHHhh
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKLR 396 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~--~~~~~~l~~~ 396 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+ +++.+++++.
T Consensus 49 ~k~vlITGas~--gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~ 94 (294)
T PRK07985 49 DRKALVTGGDS--GIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKI 94 (294)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHH
Confidence 36899999998 9999999999999999988 32 3455555544
No 211
>PRK08291 ectoine utilization protein EutC; Validated
Probab=93.59 E-value=0.21 Score=52.44 Aligned_cols=117 Identities=11% Similarity=0.049 Sum_probs=71.6
Q ss_pred ceeeecCCCCcc--eee-ecCChhHHH-----HHH--hcC-cCCCcEEEEecccCchhhHHHHHHHHhc-cC-cEEEe--
Q 009674 320 EIYLERQPNKLK--IKV-VDGSSLAAA-----VVV--NSL-PKTTAHVLLRGTVTANKVANAVASSLCQ-MG-IKVAT-- 384 (529)
Q Consensus 320 ~~~~~k~p~~L~--irv-v~Gnsltaa-----vv~--~~i-~~~~~~V~~~Gatg~~kig~ava~~L~~-~~-~~v~l-- 384 (529)
+..+.-+++ .. .-+ .+|+.+|+. ..+ ... +++.++|.++|+- ..|++.+.+|+. ++ .+|.+
T Consensus 89 g~i~l~d~~-tG~~~ai~~d~~~lt~~rT~a~~~~a~~~la~~~~~~v~IiGaG---~~a~~~~~al~~~~~~~~V~v~~ 164 (330)
T PRK08291 89 GLMVVLSAR-TGLVEALLLDNGYLTDVRTAAAGAVAARHLAREDASRAAVIGAG---EQARLQLEALTLVRPIREVRVWA 164 (330)
T ss_pred EEEEEEeCC-CCceEEEEcCCchHHHHHHHHHHHHHHHHhCCCCCCEEEEECCC---HHHHHHHHHHHhcCCCCEEEEEc
Confidence 355555554 22 233 378777641 111 212 4567899999997 679999999983 55 45666
Q ss_pred cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE----cC-cCChhhhhcCCCCceeeccc
Q 009674 385 ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GD-DLTGKEQARAPKGTIFIPYT 443 (529)
Q Consensus 385 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~-~~~~~~q~~a~~G~~f~~~~ 443 (529)
|++++.+++.+++..+.+.......++++ +++++++. .+ .++.+ +.++|+++..+.
T Consensus 165 R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al~~aDiVi~aT~s~~p~i~~~---~l~~g~~v~~vg 227 (330)
T PRK08291 165 RDAAKAEAYAADLRAELGIPVTVARDVHEAVAGADIIVTTTPSEEPILKAE---WLHPGLHVTAMG 227 (330)
T ss_pred CCHHHHHHHHHHHhhccCceEEEeCCHHHHHccCCEEEEeeCCCCcEecHH---HcCCCceEEeeC
Confidence 99999999998865443333112336664 67777662 22 23332 347888877653
No 212
>PRK12743 oxidoreductase; Provisional
Probab=93.59 E-value=0.15 Score=50.17 Aligned_cols=42 Identities=12% Similarity=0.179 Sum_probs=35.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 397 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 397 (529)
+.|+++|++| -||+++|+.|+++|.+|.+ +++++.+.+.+++
T Consensus 3 k~vlItGas~--giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~ 47 (256)
T PRK12743 3 QVAIVTASDS--GIGKACALLLAQQGFDIGITWHSDEEGAKETAEEV 47 (256)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHH
Confidence 5799999997 9999999999999999977 4666777666654
No 213
>PRK06123 short chain dehydrogenase; Provisional
Probab=93.57 E-value=0.15 Score=49.49 Aligned_cols=42 Identities=19% Similarity=0.213 Sum_probs=33.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 397 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 397 (529)
+.++++|++| -||+++|+.|+++|.+|.+ +++++.+.+.+++
T Consensus 3 ~~~lVtG~~~--~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l 47 (248)
T PRK06123 3 KVMIITGASR--GIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAI 47 (248)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHH
Confidence 4789999998 9999999999999988877 4555666555544
No 214
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=93.56 E-value=0.06 Score=53.86 Aligned_cols=101 Identities=19% Similarity=0.194 Sum_probs=63.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccCcceEEEEcCcCChhhhhc
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQAR 432 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~ 432 (529)
.|+|+|+|| -||+++++.|.++|.+|.. |+.+....+. . -..|+.++..+.+....
T Consensus 2 ~ILVtG~tG--fiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~------------~~~~~~~d~~~~~~~~~ 59 (314)
T COG0451 2 RILVTGGAG--FIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------S------------GVEFVVLDLTDRDLVDE 59 (314)
T ss_pred eEEEEcCcc--cHHHHHHHHHHhCCCeEEEEeCCCccccccc--------c------------ccceeeecccchHHHHH
Confidence 399999999 9999999999999999998 3333222111 0 01255555555433322
Q ss_pred CCCCceeecccccCccCCCCCceeecCCccccCCCCcc----ccccccccCcchhHHHHHhhH
Q 009674 433 APKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSN----MHSCENWLGRRVMSAWRIAGI 491 (529)
Q Consensus 433 a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~----~~~~e~~~p~r~~~Ac~a~~~ 491 (529)
+..+ .+ |+.++-......+....+ +..-|....++++.||.++++
T Consensus 60 ~~~~-------------~~-d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~ 108 (314)
T COG0451 60 LAKG-------------VP-DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGV 108 (314)
T ss_pred HHhc-------------CC-CEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2222 11 777777777666665432 445677778888888888444
No 215
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.54 E-value=0.16 Score=50.61 Aligned_cols=32 Identities=19% Similarity=0.388 Sum_probs=27.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
.+.|+++|+++++-||+++|+.|+++|.+|.+
T Consensus 6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~ 37 (261)
T PRK08690 6 GKKILITGMISERSIAYGIAKACREQGAELAF 37 (261)
T ss_pred CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEE
Confidence 35799999853247999999999999999988
No 216
>PLN02686 cinnamoyl-CoA reductase
Probab=93.54 E-value=0.16 Score=53.62 Aligned_cols=42 Identities=26% Similarity=0.321 Sum_probs=35.0
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 009674 351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 394 (529)
Q Consensus 351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 394 (529)
...+.|+|+|++| -||+++++.|.++|.+|.+ |+.++.+.++
T Consensus 51 ~~~k~VLVTGatG--fIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 51 AEARLVCVTGGVS--FLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCEEEEECCch--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 3567899999999 9999999999999999875 7766665553
No 217
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=93.49 E-value=0.13 Score=55.61 Aligned_cols=88 Identities=17% Similarity=0.138 Sum_probs=60.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeecccc---c--CcceEEE--EcC
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA---A--HKTKIWL--VGD 423 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~---~--~~~~vwi--vg~ 423 (529)
..|++.|+ | .||+++|..|++++ .+|++ |+.+...+++.....+.+-..+.+.+.+ + ++.+++| +.-
T Consensus 2 ~~ilviGa-G--~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 2 MKILVIGA-G--GVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP 78 (389)
T ss_pred CcEEEECC-c--hhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence 47899999 7 99999999999888 88888 9999999998875333322223444443 2 5557766 222
Q ss_pred cCChhh-hhcCCCCceeecccc
Q 009674 424 DLTGKE-QARAPKGTIFIPYTQ 444 (529)
Q Consensus 424 ~~~~~~-q~~a~~G~~f~~~~~ 444 (529)
.++..= +.=++.|+.++|.|-
T Consensus 79 ~~~~~i~ka~i~~gv~yvDts~ 100 (389)
T COG1748 79 FVDLTILKACIKTGVDYVDTSY 100 (389)
T ss_pred hhhHHHHHHHHHhCCCEEEccc
Confidence 222221 124578999999995
No 218
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=93.43 E-value=0.17 Score=48.87 Aligned_cols=42 Identities=26% Similarity=0.196 Sum_probs=34.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 397 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 397 (529)
+.|+++|++| -||+++++.|+++|.+|.+ |+.++.+++.+++
T Consensus 2 ~~~lItGa~g--~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 46 (247)
T PRK09730 2 AIALVTGGSR--GIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLI 46 (247)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHH
Confidence 4689999998 9999999999999999865 6666666555553
No 219
>PRK06128 oxidoreductase; Provisional
Probab=93.39 E-value=0.15 Score=51.95 Aligned_cols=43 Identities=19% Similarity=0.285 Sum_probs=33.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc--hhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~--~~~~~~l~~~~ 397 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ ++ .++.+++.+++
T Consensus 55 ~k~vlITGas~--gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~ 101 (300)
T PRK06128 55 GRKALITGADS--GIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLI 101 (300)
T ss_pred CCEEEEecCCC--cHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHH
Confidence 46899999998 9999999999999999988 32 23444444443
No 220
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.32 E-value=0.18 Score=49.12 Aligned_cols=41 Identities=15% Similarity=0.229 Sum_probs=31.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLR 396 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~-~~~~~~l~~~ 396 (529)
+.|+++|++| -||+++|+.|+++|.+|.+ |+ .+..+++.++
T Consensus 3 k~vlItG~sg--~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~ 46 (256)
T PRK12745 3 PVALVTGGRR--GIGLGIARALAAAGFDLAINDRPDDEELAATQQE 46 (256)
T ss_pred cEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Confidence 5799999998 9999999999999999888 43 3444444333
No 221
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=93.32 E-value=0.12 Score=51.19 Aligned_cols=39 Identities=18% Similarity=0.242 Sum_probs=33.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 393 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l 393 (529)
.++|+++||+| .||+++++.|.++|.+|+. |+.++.+.+
T Consensus 17 ~~~ilItGasG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~ 57 (251)
T PLN00141 17 TKTVFVAGATG--RTGKRIVEQLLAKGFAVKAGVRDVDKAKTS 57 (251)
T ss_pred CCeEEEECCCc--HHHHHHHHHHHhCCCEEEEEecCHHHHHHh
Confidence 56899999999 9999999999999999876 777776544
No 222
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.32 E-value=0.29 Score=50.72 Aligned_cols=139 Identities=19% Similarity=0.239 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC-
Q 009674 283 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS- 338 (529)
Q Consensus 283 ~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn- 338 (529)
.+-+.-+..-++.|++.|++..- |- ++..+++||.|- |+.++.= |++++. +=|||=
T Consensus 38 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~v~~~I~p~KDVDGl~ 117 (279)
T PRK14178 38 PASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGFH 117 (279)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccCcccCC
Confidence 34455566677889999998744 42 344446788775 3555422 333431 112332
Q ss_pred ---------------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674 339 ---------------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 397 (529)
Q Consensus 339 ---------------sltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~ 397 (529)
.-|++.|++=+ +-.-++|.|+|... -+|+.+|..|.++|-.|++ .++. +
T Consensus 118 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~--~vGrpla~lL~~~~atVtv~hs~t--~------ 187 (279)
T PRK14178 118 PLNLGRLVSGLPGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSI--DVGRPMAALLLNADATVTICHSKT--E------ 187 (279)
T ss_pred hhhHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCc--cccHHHHHHHHhCCCeeEEEecCh--h------
Confidence 24666666544 33578999999997 9999999999999999998 2111 1
Q ss_pred ccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674 398 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 398 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 447 (529)
++++ +++|++| +| +.++++.. ++|++++|++ ++.
T Consensus 188 ------------~L~~~~~~ADIvI~Avgk~~lv~~~~v---k~GavVIDVg-i~~ 227 (279)
T PRK14178 188 ------------NLKAELRQADILVSAAGKAGFITPDMV---KPGATVIDVG-INQ 227 (279)
T ss_pred ------------HHHHHHhhCCEEEECCCcccccCHHHc---CCCcEEEEee-ccc
Confidence 1221 3566666 44 44676665 9999999999 665
No 223
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=93.30 E-value=0.13 Score=52.24 Aligned_cols=32 Identities=22% Similarity=0.209 Sum_probs=26.9
Q ss_pred EEEEecccCchhhHHHHHHHHhccC--cEEEe--cchh
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKD 388 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~--~~v~l--~~~~ 388 (529)
+|+|+|||| -||+.+++.|.++| .+|.. |+.+
T Consensus 1 ~vlvtGatG--~lG~~l~~~L~~~g~~~~V~~l~R~~~ 36 (367)
T TIGR01746 1 TVLLTGATG--FLGAYLLEELLRRSTQAKVICLVRAAS 36 (367)
T ss_pred CEEEeccch--HHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence 489999999 99999999999888 56665 6554
No 224
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=93.30 E-value=0.13 Score=50.62 Aligned_cols=44 Identities=16% Similarity=0.251 Sum_probs=38.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
..+.|+++|++| -||+++|+.|+++|.++.+ |+.++.+++.+++
T Consensus 10 ~~k~vlVtG~s~--gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l 55 (255)
T PRK06113 10 DGKCAIITGAGA--GIGKEIAITFATAGASVVVSDINADAANHVVDEI 55 (255)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 457899999998 9999999999999999988 7778877776654
No 225
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.30 E-value=0.14 Score=52.38 Aligned_cols=92 Identities=15% Similarity=0.214 Sum_probs=60.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc----------------cceeeec-cccc-
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ----------------HNLVLST-SYAA- 413 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~----------------~~l~~~~-~~~~- 413 (529)
++|.++|+- .+|+++|..|++.|.+|++ +++++.+++++++..... ...+..+ ++++
T Consensus 2 ~~V~VIG~G---~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 78 (288)
T PRK09260 2 EKLVVVGAG---VMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAA 78 (288)
T ss_pred cEEEEECcc---HHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHh
Confidence 479999995 9999999999999999999 888888887654221100 0112233 6653
Q ss_pred -CcceEEE--EcCcCChh-----h-hhcCCCCcee-ecccccCcc
Q 009674 414 -HKTKIWL--VGDDLTGK-----E-QARAPKGTIF-IPYTQIPPR 448 (529)
Q Consensus 414 -~~~~vwi--vg~~~~~~-----~-q~~a~~G~~f-~~~~~~~~~ 448 (529)
++++++| +.+..+-+ + ...+++|+++ ++-|-++|.
T Consensus 79 ~~~aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt~~~~ 123 (288)
T PRK09260 79 VADADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTSTMSPT 123 (288)
T ss_pred hcCCCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCCCCHH
Confidence 7787766 33322211 1 1246889866 677778877
No 226
>PRK06484 short chain dehydrogenase; Validated
Probab=93.29 E-value=0.19 Score=54.86 Aligned_cols=46 Identities=13% Similarity=0.143 Sum_probs=40.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
..+.++|+|+++ -||+++|+.|.++|.+|.+ |+.++++++.++++.
T Consensus 4 ~~k~~lITGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 51 (520)
T PRK06484 4 QSRVVLVTGAAG--GIGRAACQRFARAGDQVVVADRNVERARERADSLGP 51 (520)
T ss_pred CCeEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence 346889999997 9999999999999999988 899999988887754
No 227
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.29 E-value=0.2 Score=48.22 Aligned_cols=43 Identities=23% Similarity=0.318 Sum_probs=35.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 397 (529)
.+.++++|++| .||+.+|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 5 ~~~ilI~Gasg--~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~ 50 (247)
T PRK05565 5 GKVAIVTGASG--GIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEI 50 (247)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 35799999998 9999999999999999877 5566666665553
No 228
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.28 E-value=0.2 Score=52.46 Aligned_cols=160 Identities=24% Similarity=0.290 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh
Q 009674 283 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS 339 (529)
Q Consensus 283 ~~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns 339 (529)
++-+.-+..-++.|++.|++.. -|. +++.++++|.|- |+.++.= |++++. +=|||=+
T Consensus 45 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~ 124 (301)
T PRK14194 45 PASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFH 124 (301)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccC
Confidence 3445556666778899998764 343 334446677764 3555421 222331 2244433
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674 340 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 396 (529)
Q Consensus 340 ----------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 396 (529)
-|++.|++=+ +-.-++|.++|..| -+|+.+|..|.++|..|++ +..+
T Consensus 125 ~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~--ivG~PmA~~L~~~gatVtv~~~~t~-------- 194 (301)
T PRK14194 125 SENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSN--IVGKPMAALLLQAHCSVTVVHSRST-------- 194 (301)
T ss_pred hhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEECCCCC--------
Confidence 3666666544 33688999999998 9999999999999999999 2211
Q ss_pred Cccccccceeeeccccc--CcceEEE--EcC--cCChhhhhcCCCCceeecccccCcc------CCCCCceeec-----C
Q 009674 397 IPVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPPR------KLRKDCFYHS-----T 459 (529)
Q Consensus 397 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~~------~~R~dc~y~~-----~ 459 (529)
++++ +.++|+| +|+ .++++ ++++|+++||++ +++. ++.-|+-|.+ .
T Consensus 195 -------------~l~e~~~~ADIVIsavg~~~~v~~~---~ik~GaiVIDvg-in~~~~~g~~kl~GDvdf~~~~~~a~ 257 (301)
T PRK14194 195 -------------DAKALCRQADIVVAAVGRPRLIDAD---WLKPGAVVIDVG-INRIDDDGRSRLVGDVDFDSALPVVS 257 (301)
T ss_pred -------------CHHHHHhcCCEEEEecCChhcccHh---hccCCcEEEEec-ccccCCCCCcceecccchHHHHhhcc
Confidence 2222 3445544 443 34443 369999999999 5542 3346665422 1
Q ss_pred CccccCCCCc
Q 009674 460 PAMIIPPSLS 469 (529)
Q Consensus 460 ~a~~~P~~~~ 469 (529)
..+.||+.+-
T Consensus 258 ~iTPVPGGVG 267 (301)
T PRK14194 258 AITPVPGGVG 267 (301)
T ss_pred eecCCCCchh
Confidence 1244676543
No 229
>PRK06198 short chain dehydrogenase; Provisional
Probab=93.28 E-value=0.18 Score=49.42 Aligned_cols=43 Identities=14% Similarity=0.191 Sum_probs=35.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~~ 397 (529)
.+.|+++|++| -||+++|+.|+++|.+ |.+ |+.++.+.+.+++
T Consensus 6 ~k~vlItGa~g--~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l 51 (260)
T PRK06198 6 GKVALVTGGTQ--GLGAAIARAFAERGAAGLVICGRNAEKGEAQAAEL 51 (260)
T ss_pred CcEEEEeCCCc--hHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHH
Confidence 46799999998 8999999999999999 777 7777666555543
No 230
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=93.26 E-value=0.16 Score=50.15 Aligned_cols=31 Identities=16% Similarity=0.298 Sum_probs=28.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
..+.|+++|+++ -||+++|+.|+++|.+|.+
T Consensus 7 ~~k~~lItGas~--gIG~aia~~l~~~G~~vv~ 37 (251)
T PRK12481 7 NGKVAIITGCNT--GLGQGMAIGLAKAGADIVG 37 (251)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 346899999997 9999999999999999998
No 231
>PLN03139 formate dehydrogenase; Provisional
Probab=93.23 E-value=0.051 Score=58.59 Aligned_cols=154 Identities=17% Similarity=0.149 Sum_probs=85.4
Q ss_pred HHHcCCcEEEecccccc--cccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHH
Q 009674 296 ADAKGVKVISLGLLNQG--EELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVAS 373 (529)
Q Consensus 296 A~k~G~kv~~LG~ln~~--e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~ 373 (529)
|.++|+.|..-...|.. -|..-.--|...|+-......+..|.=-.......+..-..++|.++|. | .||+++|+
T Consensus 140 a~~~gI~V~n~~g~na~sVAE~al~liL~l~R~~~~~~~~~~~g~W~~~~~~~~~~~L~gktVGIVG~-G--~IG~~vA~ 216 (386)
T PLN03139 140 AAAAGLTVAEVTGSNVVSVAEDELMRILILLRNFLPGYHQVVSGEWNVAGIAYRAYDLEGKTVGTVGA-G--RIGRLLLQ 216 (386)
T ss_pred HHHCCeEEEECCCcCcHHHHHHHHHHHHHHHcCcHHHHHHHHhCCCccccccCCCcCCCCCEEEEEee-c--HHHHHHHH
Confidence 55688888877665553 1121111233334411011122222211000011222335678999994 6 99999999
Q ss_pred HHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--------cCcCChhhhhcCCCCceeec
Q 009674 374 SLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------GDDLTGKEQARAPKGTIFIP 441 (529)
Q Consensus 374 ~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--------g~~~~~~~q~~a~~G~~f~~ 441 (529)
.|..-|.+|.. ++..+-+ ..++.+.. ...++++ +.++++++ -..++.+...+|++|+.+|.
T Consensus 217 ~L~afG~~V~~~d~~~~~~~-~~~~~g~~------~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN 289 (386)
T PLN03139 217 RLKPFNCNLLYHDRLKMDPE-LEKETGAK------FEEDLDAMLPKCDVVVINTPLTEKTRGMFNKERIAKMKKGVLIVN 289 (386)
T ss_pred HHHHCCCEEEEECCCCcchh-hHhhcCce------ecCCHHHHHhhCCEEEEeCCCCHHHHHHhCHHHHhhCCCCeEEEE
Confidence 99999999988 3221111 11111111 1235554 56766552 23356788899999999999
Q ss_pred ccc---cCcc---------CCC---CCceeecC
Q 009674 442 YTQ---IPPR---------KLR---KDCFYHST 459 (529)
Q Consensus 442 ~~~---~~~~---------~~R---~dc~y~~~ 459 (529)
++| ++.+ +++ -|++.++-
T Consensus 290 ~aRG~iVDe~AL~~AL~sG~l~GAaLDV~~~EP 322 (386)
T PLN03139 290 NARGAIMDTQAVADACSSGHIGGYGGDVWYPQP 322 (386)
T ss_pred CCCCchhhHHHHHHHHHcCCceEEEEcCCCCCC
Confidence 999 4433 444 68887774
No 232
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.23 E-value=0.18 Score=52.41 Aligned_cols=146 Identities=27% Similarity=0.328 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh-
Q 009674 284 AINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS- 339 (529)
Q Consensus 284 ~in~~I~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns- 339 (529)
+-+.-+...++.|++.|++..-. . .+..+++||.|. |+.++.= |++++. +=|||=+
T Consensus 45 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~ 124 (285)
T PRK14189 45 ASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHV 124 (285)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCCh
Confidence 34444666777899999887543 2 233346788874 2554422 333441 2245543
Q ss_pred ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCc
Q 009674 340 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 398 (529)
Q Consensus 340 ---------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~ 398 (529)
-|+..|++=+ +-..++|.|+|.++ -||+-+|..|.++|..|++ .++
T Consensus 125 ~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~--iVGkPla~lL~~~~atVt~~hs~----------- 191 (285)
T PRK14189 125 ANAGALMTGQPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSN--IVGKPMAMLLLQAGATVTICHSK----------- 191 (285)
T ss_pred hhhhHhhCCCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEecCC-----------
Confidence 2666666543 44688999999997 8899999999999999998 111
Q ss_pred cccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCce
Q 009674 399 VEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 455 (529)
Q Consensus 399 ~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 455 (529)
..++++ +++|++| +| ..++++. .++|+++||+. +++. ++--|+-
T Consensus 192 ---------t~~l~~~~~~ADIVV~avG~~~~i~~~~---ik~gavVIDVG-in~~~~gkl~GDVd 244 (285)
T PRK14189 192 ---------TRDLAAHTRQADIVVAAVGKRNVLTADM---VKPGATVIDVG-MNRDDAGKLCGDVD 244 (285)
T ss_pred ---------CCCHHHHhhhCCEEEEcCCCcCccCHHH---cCCCCEEEEcc-ccccCCCCeeCCcc
Confidence 012332 3555655 33 2456644 49999999998 6652 3445554
No 233
>PRK08264 short chain dehydrogenase; Validated
Probab=93.22 E-value=0.11 Score=50.11 Aligned_cols=38 Identities=21% Similarity=0.211 Sum_probs=32.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHH
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEK 392 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~ 392 (529)
.+.|+++|++| .||+++|+.|+++|. +|++ |+.++.++
T Consensus 6 ~~~vlItGgsg--~iG~~la~~l~~~G~~~V~~~~r~~~~~~~ 46 (238)
T PRK08264 6 GKVVLVTGANR--GIGRAFVEQLLARGAAKVYAAARDPESVTD 46 (238)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCcccEEEEecChhhhhh
Confidence 46799999998 999999999999998 8888 76666543
No 234
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.19 E-value=0.17 Score=50.32 Aligned_cols=44 Identities=16% Similarity=0.137 Sum_probs=32.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhhC
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLRI 397 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~---~~~~~l~~~~ 397 (529)
+.++++|+++++-||+|+|+.|+++|.+|.+ |+. +..++++++.
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~ 57 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEI 57 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhc
Confidence 5789999995335999999999999999988 552 2344454443
No 235
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=93.14 E-value=0.34 Score=52.04 Aligned_cols=85 Identities=18% Similarity=0.210 Sum_probs=57.3
Q ss_pred HHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHH----------HHHHhcCcCCCcEEEEecccCchh
Q 009674 297 DAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAA----------AVVVNSLPKTTAHVLLRGTVTANK 366 (529)
Q Consensus 297 ~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnslta----------avv~~~i~~~~~~V~~~Gatg~~k 366 (529)
.+.|+.|+++- . +|. .+ .|. -+.++-.|..+.+ ...+...+...++|+++|. | +
T Consensus 178 ~~~~~~vi~i~--r-------~~~-~~--~p~-~~~~l~~gD~l~v~g~~~~l~~~~~~~~~~~~~~~~iiIiG~-G--~ 241 (453)
T PRK09496 178 PDIDVRVVAIF--R-------GGR-LI--IPR-GDTVIEAGDEVYFIGAREHIRAVMSEFGRLEKPVKRVMIVGG-G--N 241 (453)
T ss_pred CCCceEEEEEE--E-------CCE-EE--cCC-CCcEecCCCEEEEEeCHHHHHHHHHHhCccCCCCCEEEEECC-C--H
Confidence 35788888773 2 222 11 244 4444444444432 2223333335789999999 5 9
Q ss_pred hHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 367 VANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 367 ig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
+|+.+++.|.++|.++++ +++++.++++++.
T Consensus 242 ~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~ 274 (453)
T PRK09496 242 IGYYLAKLLEKEGYSVKLIERDPERAEELAEEL 274 (453)
T ss_pred HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC
Confidence 999999999999999988 8888999888764
No 236
>PLN02214 cinnamoyl-CoA reductase
Probab=93.09 E-value=0.23 Score=51.82 Aligned_cols=35 Identities=23% Similarity=0.209 Sum_probs=30.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 389 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~ 389 (529)
.++|+|+|++| -||+++++.|.++|.+|.. |+.++
T Consensus 10 ~~~vlVTGatG--fIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 10 GKTVCVTGAGG--YIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 45799999999 9999999999999999987 66554
No 237
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.06 E-value=0.14 Score=50.99 Aligned_cols=46 Identities=17% Similarity=0.277 Sum_probs=35.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe-----cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT-----ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-----~~~~~~~~l~~~~~ 398 (529)
.+.|+++|+++++-||+|+|+.|+++|.+|.+ |++++++++.++++
T Consensus 6 ~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~ 56 (260)
T PRK06997 6 GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG 56 (260)
T ss_pred CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC
Confidence 46799999753247999999999999999987 33566666666553
No 238
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=93.06 E-value=0.13 Score=50.84 Aligned_cols=43 Identities=19% Similarity=0.255 Sum_probs=37.3
Q ss_pred EEEEecccCchhhHHHHHHHHhc----cCcEEEe--cchhhHHHHHhhCcc
Q 009674 355 HVLLRGTVTANKVANAVASSLCQ----MGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~----~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
.|+++|+++ -||+++|+.|++ .|.+|.+ |++++.+++++++..
T Consensus 2 ~vlItGas~--GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~ 50 (256)
T TIGR01500 2 VCLVTGASR--GFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGA 50 (256)
T ss_pred EEEEecCCC--chHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHh
Confidence 588999997 999999999996 7999888 899999888877643
No 239
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=93.05 E-value=0.18 Score=50.18 Aligned_cols=32 Identities=19% Similarity=0.317 Sum_probs=27.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
.+.|+++|++|++-||+++|+.|+++|.+|.+
T Consensus 6 ~k~~lItGas~~~GIG~aia~~la~~G~~v~~ 37 (258)
T PRK07370 6 GKKALVTGIANNRSIAWGIAQQLHAAGAELGI 37 (258)
T ss_pred CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEE
Confidence 46789999973248999999999999999987
No 240
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.04 E-value=0.16 Score=51.18 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=29.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK 387 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~ 387 (529)
.+.++++|+++++-||+++|+.|+++|.+|.+ |++
T Consensus 7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~ 43 (271)
T PRK06505 7 GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGE 43 (271)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCch
Confidence 46799999994236999999999999999998 554
No 241
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=93.03 E-value=0.21 Score=49.23 Aligned_cols=43 Identities=19% Similarity=0.195 Sum_probs=34.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~ 397 (529)
.+.++++|++| -||+++|+.|+++|.++.+ | +++..+++.+++
T Consensus 7 ~k~~lItGa~~--gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l 52 (261)
T PRK08936 7 GKVVVITGGST--GLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEI 52 (261)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999987 4 445555555554
No 242
>PRK06841 short chain dehydrogenase; Provisional
Probab=93.01 E-value=0.17 Score=49.45 Aligned_cols=36 Identities=19% Similarity=0.306 Sum_probs=31.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 389 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~ 389 (529)
..+.|+++|++| .||+++|+.|+++|.+|.+ |+.+.
T Consensus 14 ~~k~vlItGas~--~IG~~la~~l~~~G~~Vi~~~r~~~~ 51 (255)
T PRK06841 14 SGKVAVVTGGAS--GIGHAIAELFAAKGARVALLDRSEDV 51 (255)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 356899999998 9999999999999999998 66553
No 243
>PRK07201 short chain dehydrogenase; Provisional
Probab=92.97 E-value=0.18 Score=56.63 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=38.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 371 ~k~vlItGas~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 415 (657)
T PRK07201 371 GKVVLITGASS--GIGRATAIKVAEAGATVFLVARNGEALDELVAEI 415 (657)
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 46899999998 9999999999999999998 8888888887765
No 244
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.96 E-value=0.23 Score=49.33 Aligned_cols=45 Identities=22% Similarity=0.305 Sum_probs=35.8
Q ss_pred CcEEEEecc--cCchhhHHHHHHHHhccCcEEEe--cch--hhHHHHHhhCcc
Q 009674 353 TAHVLLRGT--VTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLRIPV 399 (529)
Q Consensus 353 ~~~V~~~Ga--tg~~kig~ava~~L~~~~~~v~l--~~~--~~~~~l~~~~~~ 399 (529)
.+.|+++|+ ++ -||+++|+.|+++|.+|.+ |++ +..++++++++.
T Consensus 7 ~k~~lItGa~~s~--GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~ 57 (256)
T PRK07889 7 GKRILVTGVITDS--SIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPE 57 (256)
T ss_pred CCEEEEeCCCCcc--hHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCC
Confidence 357899999 54 8999999999999999998 443 556777776643
No 245
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.94 E-value=0.23 Score=50.81 Aligned_cols=44 Identities=18% Similarity=0.247 Sum_probs=35.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 397 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~ 397 (529)
+.+.++|+|++| -||+++|+.|+++|.+|.+ + +.++.+++.+++
T Consensus 11 ~~k~~lVTGas~--gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i 57 (306)
T PRK07792 11 SGKVAVVTGAAA--GLGRAEALGLARLGATVVVNDVASALDASDVLDEI 57 (306)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHH
Confidence 456899999998 9999999999999999998 3 345566666554
No 246
>PLN02494 adenosylhomocysteinase
Probab=92.93 E-value=0.77 Score=50.89 Aligned_cols=156 Identities=15% Similarity=0.133 Sum_probs=97.0
Q ss_pred eeeecCChhHHHHHHhcCcC--CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee
Q 009674 332 IKVVDGSSLAAAVVVNSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL 407 (529)
Q Consensus 332 irvv~Gnsltaavv~~~i~~--~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~ 407 (529)
-|.=||.|. .-.+++.... .-++|.|+|.- +||+.+|+.|...|.+|+. ++..+...-... +.+
T Consensus 232 n~yGtgqS~-~d~i~r~t~i~LaGKtVvViGyG---~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~-G~~------- 299 (477)
T PLN02494 232 NLYGCRHSL-PDGLMRATDVMIAGKVAVICGYG---DVGKGCAAAMKAAGARVIVTEIDPICALQALME-GYQ------- 299 (477)
T ss_pred ccccccccH-HHHHHHhcCCccCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhc-CCe-------
Confidence 455567775 3344444332 56789999987 9999999999999999998 454443221111 111
Q ss_pred eccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---------------CCCCCceeecCC----cc
Q 009674 408 STSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---------------KLRKDCFYHSTP----AM 462 (529)
Q Consensus 408 ~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---------------~~R~dc~y~~~~----a~ 462 (529)
+.++++ +.++++| .| ..+..+....+++|++++-+++++++ +.|..+..-+.+ .+
T Consensus 300 vv~leEal~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~~eID~~aL~~~~~l~~~~i~~~vd~y~~~d~g~~i 379 (477)
T PLN02494 300 VLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGSGI 379 (477)
T ss_pred eccHHHHHhhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCCCccCHHHHhhccccceeccCCCceEEEcCCCCCEE
Confidence 112332 4566666 33 23578899999999999999985422 222222211211 12
Q ss_pred c--cCCCCccccccccccCcchhHHHHHhhHhhhhcCCCC
Q 009674 463 I--IPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDL 500 (529)
Q Consensus 463 ~--~P~~~~~~~~~e~~~p~r~~~Ac~a~~~v~alEgw~~ 500 (529)
. --+.+-|+- |-.+.|..+|.-.++--.+-..|-|..
T Consensus 380 ~ll~eGrlvNl~-~~~GhP~evmd~sFa~Q~la~~~l~~~ 418 (477)
T PLN02494 380 IVLAEGRLMNLG-CATGHPSFVMSCSFTNQVIAQLELWNE 418 (477)
T ss_pred EEEeCCcccccc-CCCCCCcceeeHHHHHHHHHHHHHHhc
Confidence 1 222466687 889999999999887766655555544
No 247
>PRK07023 short chain dehydrogenase; Provisional
Probab=92.92 E-value=0.2 Score=48.69 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=29.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 388 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~ 388 (529)
..|+++|++| -||+++|+.|+++|.+|++ |+.+
T Consensus 2 ~~vlItGasg--giG~~ia~~l~~~G~~v~~~~r~~~ 36 (243)
T PRK07023 2 VRAIVTGHSR--GLGAALAEQLLQPGIAVLGVARSRH 36 (243)
T ss_pred ceEEEecCCc--chHHHHHHHHHhCCCEEEEEecCcc
Confidence 3689999998 9999999999999999988 6544
No 248
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=92.91 E-value=0.15 Score=52.94 Aligned_cols=47 Identities=13% Similarity=0.199 Sum_probs=38.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 398 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~ 398 (529)
..+.++++|+.+.+-||+|+|+.|++.|-+|.+ |+.++++.++.++.
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~~~~~~~l~~~~~~~~ 55 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILVGTWVPALNIFETSLR 55 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeCcchhhHHHHhhh
Confidence 456899999931148999999999999999999 88899988876654
No 249
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=92.89 E-value=0.58 Score=45.75 Aligned_cols=84 Identities=13% Similarity=0.144 Sum_probs=58.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccCcceEEE---EcCcCC
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL---VGDDLT 426 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwi---vg~~~~ 426 (529)
..++|.+.|.. ++|+++|+.|.+.|.+|+. ++.++.++++++...+. +...++-+.+++|.+ .|..|+
T Consensus 27 ~gk~v~I~G~G---~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~----v~~~~l~~~~~Dv~vp~A~~~~I~ 99 (200)
T cd01075 27 EGKTVAVQGLG---KVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV----VAPEEIYSVDADVFAPCALGGVIN 99 (200)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE----EcchhhccccCCEEEecccccccC
Confidence 45789999994 9999999999999999999 77788888877653211 111111114677766 567899
Q ss_pred hhhhhcCCCCceeeccc
Q 009674 427 GKEQARAPKGTIFIPYT 443 (529)
Q Consensus 427 ~~~q~~a~~G~~f~~~~ 443 (529)
.+...+++.. .++.-+
T Consensus 100 ~~~~~~l~~~-~v~~~A 115 (200)
T cd01075 100 DDTIPQLKAK-AIAGAA 115 (200)
T ss_pred HHHHHHcCCC-EEEECC
Confidence 9888777644 344443
No 250
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.86 E-value=0.19 Score=52.18 Aligned_cols=161 Identities=19% Similarity=0.195 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh
Q 009674 283 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS 339 (529)
Q Consensus 283 ~~in~~I~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns 339 (529)
.+-+.-+..-.+.|++.|++. .-|. +++.+++||.|- ++.++.= |++++. +=|||=+
T Consensus 44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIlvqlPlP~~id~~~i~~~I~p~KDVDGl~ 123 (284)
T PRK14193 44 PGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNAVIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDADGLH 123 (284)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccCccCCC
Confidence 344555667778899999986 4444 333446788774 3555422 332331 2244432
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhc--cCcEEEe-cchhhHHHHHh
Q 009674 340 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQ--MGIKVAT-ICKDDYEKLKL 395 (529)
Q Consensus 340 ----------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~--~~~~v~l-~~~~~~~~l~~ 395 (529)
-|+..|++=+ +-.-++|+|+|.+. -||+-+|..|.+ ++..|++ .++
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~~~atVtvchs~-------- 193 (284)
T PRK14193 124 PTNLGRLVLNEPAPLPCTPRGIVHLLRRYDVELAGAHVVVIGRGV--TVGRPIGLLLTRRSENATVTLCHTG-------- 193 (284)
T ss_pred hhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHhhccCCCEEEEeCCC--------
Confidence 3666666544 44678999999998 999999999997 7888988 221
Q ss_pred hCccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCce----eecCCcc
Q 009674 396 RIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF----YHSTPAM 462 (529)
Q Consensus 396 ~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~----y~~~~a~ 462 (529)
..++++ +.+||+| +| +.++++.. ++|+++||+. +++. ++.-|+- ..-...+
T Consensus 194 ------------T~~l~~~~k~ADIvV~AvGkp~~i~~~~i---k~GavVIDvG-in~~~~gkl~GDvd~~v~~~a~~iT 257 (284)
T PRK14193 194 ------------TRDLAAHTRRADIIVAAAGVAHLVTADMV---KPGAAVLDVG-VSRAGDGKLVGDVHPDVWEVAGAVS 257 (284)
T ss_pred ------------CCCHHHHHHhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-ccccCCCcEEeecCHhHHhhCCEEe
Confidence 012332 3566655 34 35777777 9999999998 6662 3334444 2222335
Q ss_pred ccCCCCc
Q 009674 463 IIPPSLS 469 (529)
Q Consensus 463 ~~P~~~~ 469 (529)
.||+.+-
T Consensus 258 PVPGGVG 264 (284)
T PRK14193 258 PNPGGVG 264 (284)
T ss_pred CCCCChh
Confidence 5777654
No 251
>PRK07069 short chain dehydrogenase; Validated
Probab=92.82 E-value=0.13 Score=49.87 Aligned_cols=41 Identities=20% Similarity=0.331 Sum_probs=35.2
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhCc
Q 009674 356 VLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIP 398 (529)
Q Consensus 356 V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~-~~~~~~l~~~~~ 398 (529)
|+++|++| -||+++|+.|+++|.+|.+ |+ .++++.+++++.
T Consensus 2 ilVtG~~~--~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~ 45 (251)
T PRK07069 2 AFITGAAG--GLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEIN 45 (251)
T ss_pred EEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHH
Confidence 79999998 9999999999999999988 66 677777776654
No 252
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.80 E-value=0.17 Score=50.33 Aligned_cols=46 Identities=17% Similarity=0.232 Sum_probs=36.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c---chhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I---CKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~---~~~~~~~l~~~~~ 398 (529)
.+.++++|+++.+-||+++|+.|+++|.+|.+ | ++++++++++++.
T Consensus 7 ~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~ 57 (257)
T PRK08594 7 GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE 57 (257)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC
Confidence 46789999971027999999999999999998 3 3467788877764
No 253
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=92.79 E-value=0.13 Score=53.01 Aligned_cols=102 Identities=15% Similarity=0.170 Sum_probs=68.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--EcCc----
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD---- 424 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~---- 424 (529)
+|.++|.- .+|.++|+.|.+.|.+|.+ |++++.++++++- .. ...+.++ ++++++| +-+.
T Consensus 3 ~Ig~IGlG---~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g-~~------~~~s~~~~~~~aDvVi~~vp~~~~~~ 72 (296)
T PRK15461 3 AIAFIGLG---QMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKG-AT------PAASPAQAAAGAEFVITMLPNGDLVR 72 (296)
T ss_pred eEEEEeeC---HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcC-Cc------ccCCHHHHHhcCCEEEEecCCHHHHH
Confidence 68889866 9999999999999999988 8888888887651 10 1223332 5555544 2111
Q ss_pred --CChh-h-hhcCCCCceeecccccCccCC--------CCCceeecCCccccCC
Q 009674 425 --LTGK-E-QARAPKGTIFIPYTQIPPRKL--------RKDCFYHSTPAMIIPP 466 (529)
Q Consensus 425 --~~~~-~-q~~a~~G~~f~~~~~~~~~~~--------R~dc~y~~~~a~~~P~ 466 (529)
+... . ...+++|+++++.|.++|... .+.+.|.+.|.+..|.
T Consensus 73 ~vl~~~~~i~~~l~~g~lvid~sT~~p~~~~~l~~~l~~~g~~~ldapV~g~~~ 126 (296)
T PRK15461 73 SVLFGENGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSD 126 (296)
T ss_pred HHHcCcccHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEEccCCCCHH
Confidence 1111 1 123589999999999988722 1567788888877655
No 254
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=92.79 E-value=0.24 Score=50.76 Aligned_cols=45 Identities=20% Similarity=0.279 Sum_probs=39.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
..+.++++|++. -||+|+|+.|++.|-+|.+ |+++++++.++++.
T Consensus 7 ~gkvalVTG~s~--GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~ 53 (270)
T KOG0725|consen 7 AGKVALVTGGSS--GIGKAIALLLAKAGAKVVITGRSEERLEETAQELG 53 (270)
T ss_pred CCcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 356788999996 8999999999999999999 99999888877733
No 255
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=92.78 E-value=0.2 Score=51.06 Aligned_cols=39 Identities=18% Similarity=0.129 Sum_probs=32.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 393 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l 393 (529)
.+.|+|+|++| -||+++++.|.++|.+|.+ |+.++.++.
T Consensus 5 ~k~vlVtG~~G--~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~ 45 (325)
T PLN02989 5 GKVVCVTGASG--YIASWIVKLLLFRGYTINATVRDPKDRKKT 45 (325)
T ss_pred CCEEEEECCch--HHHHHHHHHHHHCCCEEEEEEcCCcchhhH
Confidence 36899999999 9999999999999999876 666554443
No 256
>PRK08219 short chain dehydrogenase; Provisional
Probab=92.73 E-value=0.16 Score=48.39 Aligned_cols=41 Identities=15% Similarity=0.243 Sum_probs=34.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
+.|+|+|++| .||+++|+.|+++ .+|.. |+.++.++++++.
T Consensus 4 ~~vlVtG~~g--~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~ 46 (227)
T PRK08219 4 PTALITGASR--GIGAAIARELAPT-HTLLLGGRPAERLDELAAEL 46 (227)
T ss_pred CEEEEecCCc--HHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh
Confidence 5799999998 9999999999988 88877 8888877776553
No 257
>PRK06114 short chain dehydrogenase; Provisional
Probab=92.72 E-value=0.29 Score=48.11 Aligned_cols=44 Identities=20% Similarity=0.279 Sum_probs=34.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 397 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~~ 397 (529)
..+.++++|++| -||+++|+.|+++|.+|.+ |+. +.++++.+++
T Consensus 7 ~~k~~lVtG~s~--gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l 53 (254)
T PRK06114 7 DGQVAFVTGAGS--GIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHI 53 (254)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence 346899999998 9999999999999999998 543 3455555443
No 258
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=92.69 E-value=0.25 Score=41.57 Aligned_cols=58 Identities=16% Similarity=0.225 Sum_probs=44.4
Q ss_pred EEEEecccCchhhHHHHHHHHhccC---cEEEe---cchhhHHHHHhhCccccccceeeec-cccc--CcceEEEE
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMG---IKVAT---ICKDDYEKLKLRIPVEAQHNLVLST-SYAA--HKTKIWLV 421 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~---~~v~l---~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~--~~~~vwiv 421 (529)
+|.++|+- ++|.|+++.|.+.| .++.+ |++|+.++++++.+.+. .. +.++ ++++++|+
T Consensus 1 kI~iIG~G---~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~~~advvil 67 (96)
T PF03807_consen 1 KIGIIGAG---NMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQA------TADDNEEAAQEADVVIL 67 (96)
T ss_dssp EEEEESTS---HHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEE------ESEEHHHHHHHTSEEEE
T ss_pred CEEEECCC---HHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccc------ccCChHHhhccCCEEEE
Confidence 46777665 99999999999999 88885 99999999999977443 22 3443 66777663
No 259
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=92.62 E-value=0.78 Score=45.91 Aligned_cols=78 Identities=17% Similarity=0.143 Sum_probs=48.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEE-e--c----------chhhHHHHHhhCccccccceeeeccc--cc---
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVA-T--I----------CKDDYEKLKLRIPVEAQHNLVLSTSY--AA--- 413 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~-l--~----------~~~~~~~l~~~~~~~~~~~l~~~~~~--~~--- 413 (529)
..++|++.| .| +||+.+|+.|.+.|.+|+ + . +.+++.+++++-..-. ++-..+.+ ++
T Consensus 30 ~~~~v~I~G-~G--~VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~~~g~l~--~~~~~~~~~~~~i~~ 104 (227)
T cd01076 30 AGARVAIQG-FG--NVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVL--GFPGAERITNEELLE 104 (227)
T ss_pred cCCEEEEEC-CC--HHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCCcc--cCCCceecCCcccee
Confidence 467999999 46 999999999999999999 5 2 4455555555421100 00000111 11
Q ss_pred CcceEEE---EcCcCChhhhhcCC
Q 009674 414 HKTKIWL---VGDDLTGKEQARAP 434 (529)
Q Consensus 414 ~~~~vwi---vg~~~~~~~q~~a~ 434 (529)
.+|||.| .++.|+++...+.+
T Consensus 105 ~~~Dvlip~a~~~~i~~~~~~~l~ 128 (227)
T cd01076 105 LDCDILIPAALENQITADNADRIK 128 (227)
T ss_pred ecccEEEecCccCccCHHHHhhce
Confidence 4667766 56777776665444
No 260
>PRK06179 short chain dehydrogenase; Provisional
Probab=92.61 E-value=0.14 Score=50.60 Aligned_cols=36 Identities=19% Similarity=0.235 Sum_probs=31.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE 391 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~ 391 (529)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+
T Consensus 5 ~~vlVtGasg--~iG~~~a~~l~~~g~~V~~~~r~~~~~~ 42 (270)
T PRK06179 5 KVALVTGASS--GIGRATAEKLARAGYRVFGTSRNPARAA 42 (270)
T ss_pred CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCChhhcc
Confidence 5799999998 9999999999999999998 6655443
No 261
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=92.57 E-value=0.47 Score=51.60 Aligned_cols=157 Identities=13% Similarity=0.099 Sum_probs=93.0
Q ss_pred ceeeecCChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccccee
Q 009674 331 KIKVVDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV 406 (529)
Q Consensus 331 ~irvv~Gnsltaavv~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~ 406 (529)
+-|.=+|.|.. -.+.+.. ....++|+|+|.- .||+.+|+.|...|.+|+. +++.+....... +.
T Consensus 172 Dn~yg~g~s~~-~~i~r~t~~~l~Gk~VvViG~G---~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~---G~----- 239 (406)
T TIGR00936 172 DNRYGTGQSTI-DGILRATNLLIAGKTVVVAGYG---WCGKGIAMRARGMGARVIVTEVDPIRALEAAMD---GF----- 239 (406)
T ss_pred hcccccchhHH-HHHHHhcCCCCCcCEEEEECCC---HHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhc---CC-----
Confidence 34566777744 3345443 3456799999976 9999999999999999988 455543222211 11
Q ss_pred eeccccc--CcceEEEE----cCcCChhhhhcCCCCceeecccccCcc--------------CCCCCce---eecCCcc-
Q 009674 407 LSTSYAA--HKTKIWLV----GDDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCF---YHSTPAM- 462 (529)
Q Consensus 407 ~~~~~~~--~~~~vwiv----g~~~~~~~q~~a~~G~~f~~~~~~~~~--------------~~R~dc~---y~~~~a~- 462 (529)
++.++++ +.++++|. -+.++.+....+++|++++-+.+++.+ +.|.-.. .+++-.+
T Consensus 240 ~v~~leeal~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~~eId~~aL~~~~~~~~~~~~~v~~~~~~~g~~i~ 319 (406)
T TIGR00936 240 RVMTMEEAAKIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFDVEIDVKALEELAVEKRNVRPQVDEYILKDGRRIY 319 (406)
T ss_pred EeCCHHHHHhcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCCceeCHHHHHHHHhhccccccceEEEEeCCCCEEE
Confidence 1223332 56677662 234566677899999999998886541 2231111 1111111
Q ss_pred cc-CCCCccccccccccCcchhHHHHHhhHhhhhcCCCC
Q 009674 463 II-PPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDL 500 (529)
Q Consensus 463 ~~-P~~~~~~~~~e~~~p~r~~~Ac~a~~~v~alEgw~~ 500 (529)
.+ -+..-|+- |..+.|..+|.--+|-=.+-+++=|.+
T Consensus 320 ll~~GrlvNl~-~~~ghp~~vmd~sfa~q~la~~~l~~~ 357 (406)
T TIGR00936 320 LLAEGRLVNLA-AAEGHPSEVMDMSFANQALAAEYLWKN 357 (406)
T ss_pred EEeCCceeccc-CCCCCcceeeCHHHHHHHHHHHHHHhc
Confidence 11 11355566 888899999976665444444444443
No 262
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.55 E-value=0.19 Score=49.34 Aligned_cols=41 Identities=22% Similarity=0.361 Sum_probs=33.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHh
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKL 395 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~ 395 (529)
.+.++++|++| -||+++|+.|+++|.+|.+ ++++..+++++
T Consensus 7 ~k~~lItGas~--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~ 50 (255)
T PRK06463 7 GKVALITGGTR--GIGRAIAEAFLREGAKVAVLYNSAENEAKELRE 50 (255)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh
Confidence 46899999998 9999999999999999987 34455555654
No 263
>PRK05855 short chain dehydrogenase; Validated
Probab=92.54 E-value=0.25 Score=53.88 Aligned_cols=44 Identities=18% Similarity=0.214 Sum_probs=38.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
...++|+|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 315 ~~~~lv~G~s~--giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 360 (582)
T PRK05855 315 GKLVVVTGAGS--GIGRETALAFAREGAEVVASDIDEAAAERTAELIR 360 (582)
T ss_pred CCEEEEECCcC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46789999998 9999999999999999988 88888888777653
No 264
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=92.49 E-value=0.15 Score=46.77 Aligned_cols=66 Identities=17% Similarity=0.223 Sum_probs=43.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE---cCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV---GDD 424 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv---g~~ 424 (529)
+-+|-++|+ | |+|.+++++|.+.|..|.- |+.+.-++++.+++... +.++++ .+++++++ ||.
T Consensus 10 ~l~I~iIGa-G--rVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~------~~~~~~~~~~aDlv~iavpDda 80 (127)
T PF10727_consen 10 RLKIGIIGA-G--RVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGA------ILDLEEILRDADLVFIAVPDDA 80 (127)
T ss_dssp --EEEEECT-S--CCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----------TTGGGCC-SEEEE-S-CCH
T ss_pred ccEEEEECC-C--HHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccc------ccccccccccCCEEEEEechHH
Confidence 457899999 4 9999999999999998876 77778888888777655 445554 67788664 555
Q ss_pred CCh
Q 009674 425 LTG 427 (529)
Q Consensus 425 ~~~ 427 (529)
|.+
T Consensus 81 I~~ 83 (127)
T PF10727_consen 81 IAE 83 (127)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 265
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=92.46 E-value=0.22 Score=48.09 Aligned_cols=40 Identities=25% Similarity=0.394 Sum_probs=32.0
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674 356 VLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 397 (529)
Q Consensus 356 V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 397 (529)
|+++|++| -||+++|+.|+++|.+|.+ +++++.+.+.+++
T Consensus 1 vlItGas~--giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l 43 (239)
T TIGR01831 1 VLVTGASR--GIGRAIANRLAADGFEICVHYHSGRSDAESVVSAI 43 (239)
T ss_pred CEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 58999998 9999999999999999877 3445566555554
No 266
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=92.45 E-value=0.22 Score=47.03 Aligned_cols=92 Identities=16% Similarity=0.163 Sum_probs=58.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccc----ee-----------eeccc----
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHN----LV-----------LSTSY---- 411 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~----l~-----------~~~~~---- 411 (529)
.++|+|+|+- .+|...++.|.+.|.+|+. .+.++.++++..-....... +. ....+
T Consensus 20 p~~vvv~G~G---~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 96 (168)
T PF01262_consen 20 PAKVVVTGAG---RVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNF 96 (168)
T ss_dssp T-EEEEESTS---HHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHH
T ss_pred CeEEEEECCC---HHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHH
Confidence 4688888865 9999999999999999999 55556665554422211110 00 01122
Q ss_pred cc--CcceEEE---------EcCcCChhhhhcCCCCceeecccccCcc
Q 009674 412 AA--HKTKIWL---------VGDDLTGKEQARAPKGTIFIPYTQIPPR 448 (529)
Q Consensus 412 ~~--~~~~vwi---------vg~~~~~~~q~~a~~G~~f~~~~~~~~~ 448 (529)
.+ +.++++| .-..++.++.++++||.+++|+| .+.-
T Consensus 97 ~~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis-~D~g 143 (168)
T PF01262_consen 97 AEFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS-CDQG 143 (168)
T ss_dssp HHHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT-GGGT
T ss_pred HHHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE-ecCC
Confidence 22 4556766 33578999999999999999999 6655
No 267
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=92.42 E-value=0.27 Score=48.29 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=33.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++ ..+++.+++
T Consensus 8 ~k~vlVtGas~--gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~ 51 (260)
T PRK12823 8 GKVVVVTGAAQ--GIGRGVALRAAAEGARVVLVDRSE-LVHEVAAEL 51 (260)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHH
Confidence 46799999998 9999999999999999988 553 344554443
No 268
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.39 E-value=0.26 Score=51.13 Aligned_cols=149 Identities=21% Similarity=0.264 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh
Q 009674 283 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS 339 (529)
Q Consensus 283 ~~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns 339 (529)
++-+.-+....+.|++.|++.. -|. +++.++++|.|- ++.++.= |++++. +=|||=|
T Consensus 43 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~ 122 (285)
T PRK14191 43 PASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFH 122 (285)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccC
Confidence 3444556667778899998764 344 233347788763 2555422 332431 2245543
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674 340 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 397 (529)
Q Consensus 340 ----------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~ 397 (529)
-|++.|++=+ +-.-++|+|+|... -||+-+|..|.++|-.|++ .++. ++|++.
T Consensus 123 ~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~--~VG~Pla~lL~~~gAtVtv~hs~t--~~l~~~- 197 (285)
T PRK14191 123 PLNIGKLCSQLDGFVPATPMGVMRLLKHYHIEIKGKDVVIIGASN--IVGKPLAMLMLNAGASVSVCHILT--KDLSFY- 197 (285)
T ss_pred hhhHHHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCEEEEEeCCc--HHHHHH-
Confidence 4666666544 44678999999997 9999999999999999999 2111 111110
Q ss_pred ccccccceeeecccccCcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCce
Q 009674 398 PVEAQHNLVLSTSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 455 (529)
Q Consensus 398 ~~~~~~~l~~~~~~~~~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 455 (529)
. +.++|+| +| +.++++.. ++|+++||+. +++. ++--|+-
T Consensus 198 ---~------------~~ADIvV~AvG~p~~i~~~~v---k~GavVIDvG-i~~~~~gklvGDvd 243 (285)
T PRK14191 198 ---T------------QNADIVCVGVGKPDLIKASMV---KKGAVVVDIG-INRLNDGRLVGDVD 243 (285)
T ss_pred ---H------------HhCCEEEEecCCCCcCCHHHc---CCCcEEEEee-cccccCCceecccc
Confidence 0 2455655 33 34676666 9999999998 6552 3445554
No 269
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.35 E-value=0.25 Score=51.25 Aligned_cols=160 Identities=18% Similarity=0.223 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeecC-CCCcce------------------
Q 009674 284 AINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------ 332 (529)
Q Consensus 284 ~in~~I~~Ai~~A~k~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------ 332 (529)
+-+.-+...++.|++.|++..-.= +++.++++|.|- |+.++.= |++++.
T Consensus 43 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~ 122 (282)
T PRK14182 43 ASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFHP 122 (282)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcCCCCH
Confidence 344446667788999999875432 333346788874 3555522 333441
Q ss_pred ----eeecCC-----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674 333 ----KVVDGS-----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 397 (529)
Q Consensus 333 ----rvv~Gn-----sltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~ 397 (529)
|+..|+ .-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|-.|++ .++- .
T Consensus 123 ~n~g~l~~g~~~~~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~AtVtichs~T--~------ 192 (282)
T PRK14182 123 FNVGALSIGIAGVPRPCTPAGVMRMLDEARVDPKGKRALVVGRSN--IVGKPMAMMLLERHATVTIAHSRT--A------ 192 (282)
T ss_pred hHHHHHhCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--C------
Confidence 222232 23666666544 44688999999997 9999999999999999998 2110 1
Q ss_pred ccccccceeeeccccc--CcceEEE--EcC--cCChhhhhcCCCCceeecccccCcc---CCCCCceeec-----CCccc
Q 009674 398 PVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAMI 463 (529)
Q Consensus 398 ~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~~-----~~a~~ 463 (529)
++++ +.+||+| +|+ .++++.. ++|++++|+. +.+. ++.-|+-+.+ ...+.
T Consensus 193 ------------nl~~~~~~ADIvI~AvGk~~~i~~~~i---k~gaiVIDvG-in~~~~gkl~GDVd~~~v~~~a~~iTP 256 (282)
T PRK14182 193 ------------DLAGEVGRADILVAAIGKAELVKGAWV---KEGAVVIDVG-MNRLADGKLVGDVEFAAAAARASAITP 256 (282)
T ss_pred ------------CHHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEEee-ceecCCCCeeCCCCHHHHHhhccEecC
Confidence 2222 3566666 342 4666666 9999999998 6662 4446654322 22245
Q ss_pred cCCCCc
Q 009674 464 IPPSLS 469 (529)
Q Consensus 464 ~P~~~~ 469 (529)
||+.+-
T Consensus 257 VPGGVG 262 (282)
T PRK14182 257 VPGGVG 262 (282)
T ss_pred CCCCCh
Confidence 666543
No 270
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.34 E-value=0.22 Score=51.88 Aligned_cols=138 Identities=21% Similarity=0.258 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce------------------
Q 009674 284 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------ 332 (529)
Q Consensus 284 ~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------ 332 (529)
+-+.-+...++.|++.|++.-- |. ++..+++||.|- ++.++.= |++++.
T Consensus 45 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~I~~lN~d~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~ 124 (294)
T PRK14187 45 ASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIEKINELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDGFHN 124 (294)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCCh
Confidence 3444456667789999988654 42 233346778874 3555522 332431
Q ss_pred ----eeecCC---hh---HHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 009674 333 ----KVVDGS---SL---AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 396 (529)
Q Consensus 333 ----rvv~Gn---sl---taavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~ 396 (529)
|+..|+ .+ |++.|++=+ +-.-++|+|+|.+. -||+-+|..|.++|-.|++ .++-
T Consensus 125 ~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~aTVt~chs~T-------- 194 (294)
T PRK14187 125 ENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSN--IVGKPMACLLLGENCTVTTVHSAT-------- 194 (294)
T ss_pred hhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHhhCCCEEEEeCCCC--------
Confidence 233444 22 777766644 44688999999997 9999999999999999999 2110
Q ss_pred Cccccccceeeeccccc--CcceEEE--EcCc--CChhhhhcCCCCceeecccccCc
Q 009674 397 IPVEAQHNLVLSTSYAA--HKTKIWL--VGDD--LTGKEQARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 397 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~--~~~~~q~~a~~G~~f~~~~~~~~ 447 (529)
.++++ +++||+| +|+- ++++.. ++|+++||+- +.+
T Consensus 195 ------------~~l~~~~~~ADIvVsAvGkp~~i~~~~i---k~gaiVIDVG-in~ 235 (294)
T PRK14187 195 ------------RDLADYCSKADILVAAVGIPNFVKYSWI---KKGAIVIDVG-INS 235 (294)
T ss_pred ------------CCHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence 12332 3566655 5544 787777 8999999996 554
No 271
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=92.31 E-value=0.28 Score=50.07 Aligned_cols=39 Identities=21% Similarity=0.185 Sum_probs=34.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 395 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 395 (529)
++|.++|+- .+|+++|..|++.|.+|++ +++++.+++++
T Consensus 5 ~kI~vIGaG---~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 45 (292)
T PRK07530 5 KKVGVIGAG---QMGNGIAHVCALAGYDVLLNDVSADRLEAGLA 45 (292)
T ss_pred CEEEEECCc---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 579999996 9999999999999999999 88888877554
No 272
>PRK12747 short chain dehydrogenase; Provisional
Probab=92.31 E-value=0.19 Score=49.14 Aligned_cols=43 Identities=26% Similarity=0.292 Sum_probs=35.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 397 (529)
.+.++++|++| -||+++|+.|+++|.+|.+ +++++.+++..++
T Consensus 4 ~k~~lItGas~--gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 49 (252)
T PRK12747 4 GKVALVTGASR--GIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEI 49 (252)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHH
Confidence 35899999998 9999999999999999987 4556666665554
No 273
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.27 E-value=0.26 Score=51.19 Aligned_cols=148 Identities=21% Similarity=0.256 Sum_probs=95.5
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC
Q 009674 282 REAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS 338 (529)
Q Consensus 282 ~~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn 338 (529)
..+-+.-+...++.|++.|++..- |. +++.+++||.|- |+.++.= |++++. +=|||=
T Consensus 42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl 121 (284)
T PRK14170 42 NQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGF 121 (284)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcccC
Confidence 344555566778889999998653 44 334447788874 3555422 222331 224444
Q ss_pred h----------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 009674 339 S----------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 396 (529)
Q Consensus 339 s----------------ltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~ 396 (529)
| -|++.|++=+. -.-++|+++|.+. -||+-+|..|.++|-.|++ .++-
T Consensus 122 ~p~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~--iVGkPla~lL~~~~atVtichs~T-------- 191 (284)
T PRK14170 122 HPVNVGNLFIGKDSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSN--IVGKPVAQLLLNENATVTIAHSRT-------- 191 (284)
T ss_pred ChhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--------
Confidence 3 36677666543 3688999999998 9999999999999999998 2111
Q ss_pred Cccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCce
Q 009674 397 IPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 455 (529)
Q Consensus 397 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 455 (529)
.++++ +++||+| +| ..++++.. ++|+++||+. ++.. ++--|+-
T Consensus 192 ------------~~l~~~~~~ADIvI~AvG~~~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDvd 243 (284)
T PRK14170 192 ------------KDLPQVAKEADILVVATGLAKFVKKDYI---KPGAIVIDVG-MDRDENNKLCGDVD 243 (284)
T ss_pred ------------CCHHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-CcccCCCCeecccc
Confidence 12332 3566666 33 35777776 8999999998 6652 3444544
No 274
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=92.22 E-value=0.29 Score=50.98 Aligned_cols=31 Identities=13% Similarity=0.174 Sum_probs=28.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
..++|+|+|+|| =||+.+++.|.++|.+|+.
T Consensus 14 ~~~~vlVtGatG--fiG~~lv~~L~~~g~~V~~ 44 (348)
T PRK15181 14 APKRWLITGVAG--FIGSGLLEELLFLNQTVIG 44 (348)
T ss_pred cCCEEEEECCcc--HHHHHHHHHHHHCCCEEEE
Confidence 457899999999 9999999999999999876
No 275
>PRK12744 short chain dehydrogenase; Provisional
Probab=92.20 E-value=0.19 Score=49.45 Aligned_cols=30 Identities=23% Similarity=0.368 Sum_probs=26.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 8 ~k~vlItGa~~--gIG~~~a~~l~~~G~~vv~ 37 (257)
T PRK12744 8 GKVVLIAGGAK--NLGGLIARDLAAQGAKAVA 37 (257)
T ss_pred CcEEEEECCCc--hHHHHHHHHHHHCCCcEEE
Confidence 36899999998 9999999999999999554
No 276
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=92.17 E-value=0.31 Score=46.93 Aligned_cols=41 Identities=20% Similarity=0.247 Sum_probs=33.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLR 396 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~ 396 (529)
+.++++|++| -||+++|+.|+++|.++.+ | ++++.+++.++
T Consensus 1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 44 (242)
T TIGR01829 1 RIALVTGGMG--GIGTAICQRLAKDGYRVAANCGPNEERAEAWLQE 44 (242)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH
Confidence 4689999998 9999999999999999877 4 55666655444
No 277
>PRK07791 short chain dehydrogenase; Provisional
Probab=92.16 E-value=0.32 Score=49.31 Aligned_cols=44 Identities=18% Similarity=0.169 Sum_probs=36.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---------hhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---------DDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~---------~~~~~l~~~~~ 398 (529)
.+.++++|+++ -||+++|+.|+++|.+|.+ ++. ++.+++.+++.
T Consensus 6 ~k~~lITGas~--GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~ 60 (286)
T PRK07791 6 GRVVIVTGAGG--GIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIV 60 (286)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHH
Confidence 46899999997 9999999999999999988 544 66777766653
No 278
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.16 E-value=0.24 Score=47.89 Aligned_cols=43 Identities=21% Similarity=0.314 Sum_probs=36.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++++.+.+++
T Consensus 5 ~~~~lItG~~g--~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~ 49 (253)
T PRK08217 5 DKVIVITGGAQ--GLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAEC 49 (253)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45799999998 9999999999999999888 7877777776664
No 279
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=92.14 E-value=0.29 Score=54.56 Aligned_cols=94 Identities=14% Similarity=0.116 Sum_probs=61.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc-------------cccc---cceeeec-ccc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEAQ---HNLVLST-SYA 412 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~-------------~~~~---~~l~~~~-~~~ 412 (529)
.-++|.|+|+ | .+|+.||..|++.|++|++ ++++.+++..+.+. .+.. ...+..+ +++
T Consensus 6 ~i~~V~VIGa-G--~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~ 82 (507)
T PRK08268 6 SIATVAVIGA-G--AMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEALA 82 (507)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHH
Confidence 4568999999 5 9999999999999999999 88888877432221 1111 1112233 666
Q ss_pred c-CcceEEE--EcCcCChhh-----hhc-CCCCceee-cccccCcc
Q 009674 413 A-HKTKIWL--VGDDLTGKE-----QAR-APKGTIFI-PYTQIPPR 448 (529)
Q Consensus 413 ~-~~~~vwi--vg~~~~~~~-----q~~-a~~G~~f~-~~~~~~~~ 448 (529)
+ ++++++| |-+.++-+. ... .++++++. ..|-+|+.
T Consensus 83 ~~~~aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntStl~i~ 128 (507)
T PRK08268 83 DLADCDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSSLSIT 128 (507)
T ss_pred HhCCCCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence 5 7888777 333333222 222 48899884 77777776
No 280
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=92.13 E-value=0.2 Score=51.15 Aligned_cols=83 Identities=14% Similarity=0.204 Sum_probs=56.2
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--EcCc--C--
Q 009674 356 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD--L-- 425 (529)
Q Consensus 356 V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~--~-- 425 (529)
|.++|. | .+|+++|+.|++.|.+|++ |++++.+.+++. +.. ..++.++ ++++++| +-+. +
T Consensus 2 IgvIG~-G--~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~------~~~~~~~~~~~aDivi~~vp~~~~~~~ 71 (291)
T TIGR01505 2 VGFIGL-G--IMGSPMSINLAKAGYQLHVTTIGPEVADELLAA-GAV------TAETARQVTEQADVIFTMVPDSPQVEE 71 (291)
T ss_pred EEEEEe-c--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCc------ccCCHHHHHhcCCEEEEecCCHHHHHH
Confidence 778886 4 9999999999999999998 888888887654 111 1223332 5666644 2221 1
Q ss_pred ---Chhh-hhcCCCCceeecccccCcc
Q 009674 426 ---TGKE-QARAPKGTIFIPYTQIPPR 448 (529)
Q Consensus 426 ---~~~~-q~~a~~G~~f~~~~~~~~~ 448 (529)
.+++ ...+++|+++++.|.++|.
T Consensus 72 v~~~~~~~~~~~~~g~iivd~st~~~~ 98 (291)
T TIGR01505 72 VAFGENGIIEGAKPGKTLVDMSSISPI 98 (291)
T ss_pred HHcCcchHhhcCCCCCEEEECCCCCHH
Confidence 1111 2356899999999998885
No 281
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=92.13 E-value=0.38 Score=46.72 Aligned_cols=30 Identities=17% Similarity=0.320 Sum_probs=27.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
.+.|+|+|++| -||+++|+.|+++|.+|.+
T Consensus 3 ~k~~lVtG~s~--giG~~~a~~l~~~G~~vv~ 32 (246)
T PRK12938 3 QRIAYVTGGMG--GIGTSICQRLHKDGFKVVA 32 (246)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHcCCEEEE
Confidence 35789999998 9999999999999999887
No 282
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.10 E-value=0.3 Score=50.67 Aligned_cols=147 Identities=18% Similarity=0.211 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 009674 283 EAINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------------- 332 (529)
Q Consensus 283 ~~in~~I~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------------- 332 (529)
.+-+.-+..-++.|++.|++.--. . +++.++++|.|- ++.+..= |++++.
T Consensus 43 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PlP~~i~~~~i~~~I~p~KDVDGl~ 122 (282)
T PRK14180 43 PASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFH 122 (282)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhhcCccccccccC
Confidence 344445556667788888876543 3 233346777774 2444421 222331
Q ss_pred -----eeecCC-----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 009674 333 -----KVVDGS-----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 396 (529)
Q Consensus 333 -----rvv~Gn-----sltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~ 396 (529)
|+..|+ .-|+..|++=+ +-.-++|+++|.+. -||+-+|..|.++|..|++ .++- .
T Consensus 123 ~~n~g~l~~g~~~~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~ATVt~chs~T--~----- 193 (282)
T PRK14180 123 PTNVGRLQLRDKKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASN--VVGKPVSQLLLNAKATVTTCHRFT--T----- 193 (282)
T ss_pred hhhHHHHhcCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEEcCCC--C-----
Confidence 222332 34666666544 34688999999998 9999999999999999999 2111 1
Q ss_pred Cccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc--CCCCCce
Q 009674 397 IPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCF 455 (529)
Q Consensus 397 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~ 455 (529)
++++ +.+||+| +| +.++++.. ++|++++|+. ++.. ++.-|+-
T Consensus 194 -------------dl~~~~k~ADIvIsAvGkp~~i~~~~v---k~gavVIDvG-in~~~gkl~GDvd 243 (282)
T PRK14180 194 -------------DLKSHTTKADILIVAVGKPNFITADMV---KEGAVVIDVG-INHVDGKIVGDVD 243 (282)
T ss_pred -------------CHHHHhhhcCEEEEccCCcCcCCHHHc---CCCcEEEEec-ccccCCceeCCcC
Confidence 2222 3566666 34 34777666 9999999998 6652 5556665
No 283
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=92.09 E-value=0.29 Score=53.10 Aligned_cols=38 Identities=24% Similarity=0.263 Sum_probs=32.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 392 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~ 392 (529)
.++|+++||+| -||+++|+.|+++|.+|.. |+++++++
T Consensus 178 gK~VLITGASg--GIG~aLA~~La~~G~~Vi~l~r~~~~l~~ 217 (406)
T PRK07424 178 GKTVAVTGASG--TLGQALLKELHQQGAKVVALTSNSDKITL 217 (406)
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 45899999998 9999999999999999987 66666543
No 284
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=92.07 E-value=0.24 Score=52.98 Aligned_cols=43 Identities=21% Similarity=0.222 Sum_probs=34.8
Q ss_pred HhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 009674 346 VNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 390 (529)
Q Consensus 346 ~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~ 390 (529)
..+.+....+|+|+|+|| -||+++++.|.++|.+|.. |+.++.
T Consensus 53 ~~~~~~~~~kVLVtGatG--~IG~~l~~~Ll~~G~~V~~l~R~~~~~ 97 (390)
T PLN02657 53 FRSKEPKDVTVLVVGATG--YIGKFVVRELVRRGYNVVAVAREKSGI 97 (390)
T ss_pred ccccCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEEechhhc
Confidence 334444567899999999 9999999999999999988 665543
No 285
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.07 E-value=0.3 Score=50.73 Aligned_cols=146 Identities=20% Similarity=0.234 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCccee----------eecCC--
Q 009674 284 AINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKIK----------VVDGS-- 338 (529)
Q Consensus 284 ~in~~I~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~ir----------vv~Gn-- 338 (529)
+-+.-+..-++.|++.|++..-. . +++.+++||.|- ++.++.= |++++.+ =|||=
T Consensus 44 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~ 123 (286)
T PRK14184 44 ASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHP 123 (286)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCcCceEEEecCCCCCCCHHHHHhccCcccCcccCCH
Confidence 34444666677899999887543 3 333446788864 3555422 3334421 13332
Q ss_pred --------------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhc----cCcEEEe-cchhhHHHHH
Q 009674 339 --------------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQ----MGIKVAT-ICKDDYEKLK 394 (529)
Q Consensus 339 --------------sltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~----~~~~v~l-~~~~~~~~l~ 394 (529)
.-|++.|++=+ +-.-++|+++|... -||+-+|..|.+ ++-.|++ .++.
T Consensus 124 ~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~~~~~AtVt~~hs~t------ 195 (286)
T PRK14184 124 ENMGRLALGLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSN--IVGKPLALMLGAPGKFANATVTVCHSRT------ 195 (286)
T ss_pred hhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHhCCcccCCCEEEEEeCCc------
Confidence 24666666543 44678999999997 999999999998 8888888 2111
Q ss_pred hhCccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc--CCCCCce
Q 009674 395 LRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCF 455 (529)
Q Consensus 395 ~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~ 455 (529)
.++++ +++||+| +| +.++++.. ++|++++|+. +++. ++--|+-
T Consensus 196 --------------~~l~~~~~~ADIVI~AvG~p~li~~~~v---k~GavVIDVG-i~~~~~~l~GDVd 246 (286)
T PRK14184 196 --------------PDLAEECREADFLFVAIGRPRFVTADMV---KPGAVVVDVG-INRTDDGLVGDCD 246 (286)
T ss_pred --------------hhHHHHHHhCCEEEEecCCCCcCCHHHc---CCCCEEEEee-eeccCCCccCCcc
Confidence 12322 3556666 33 34677666 9999999999 7763 4445554
No 286
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=92.06 E-value=0.24 Score=52.51 Aligned_cols=85 Identities=16% Similarity=0.209 Sum_probs=50.8
Q ss_pred EEEecccCchhhHHHHHHHHhccC-c-EEEe--cchhhHHHHHhhCcccc-ccceeeeccc---cc--CcceEEE--EcC
Q 009674 356 VLLRGTVTANKVANAVASSLCQMG-I-KVAT--ICKDDYEKLKLRIPVEA-QHNLVLSTSY---AA--HKTKIWL--VGD 423 (529)
Q Consensus 356 V~~~Gatg~~kig~ava~~L~~~~-~-~v~l--~~~~~~~~l~~~~~~~~-~~~l~~~~~~---~~--~~~~vwi--vg~ 423 (529)
|++.|+ | .+|+++|+.|.+++ . ++++ ||.++++++.+++.... +..-+.+++. ++ ++++++| +|.
T Consensus 1 IlvlG~-G--~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp 77 (386)
T PF03435_consen 1 ILVLGA-G--RVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP 77 (386)
T ss_dssp EEEE---S--HHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred CEEEcC-c--HHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence 689999 9 99999999999776 4 7888 99999999988742222 1111234433 32 6778877 444
Q ss_pred cCChhhhh-cCCCCceeeccc
Q 009674 424 DLTGKEQA-RAPKGTIFIPYT 443 (529)
Q Consensus 424 ~~~~~~q~-~a~~G~~f~~~~ 443 (529)
...+.=.+ =+..|++++|.+
T Consensus 78 ~~~~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 78 FFGEPVARACIEAGVHYVDTS 98 (386)
T ss_dssp GGHHHHHHHHHHHT-EEEESS
T ss_pred chhHHHHHHHHHhCCCeeccc
Confidence 42221111 124588888855
No 287
>PRK07041 short chain dehydrogenase; Provisional
Probab=92.05 E-value=0.2 Score=48.18 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=34.5
Q ss_pred EEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 357 LLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 357 ~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
+++|++| -||+++|+.|+++|.+|++ |+.++.+.+.+++.
T Consensus 1 lItGas~--~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 42 (230)
T PRK07041 1 LVVGGSS--GIGLALARAFAAEGARVTIASRSRDRLAAAARALG 42 (230)
T ss_pred CeecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 4789998 9999999999999999988 88888887766653
No 288
>PRK06701 short chain dehydrogenase; Provisional
Probab=91.95 E-value=0.32 Score=49.43 Aligned_cols=43 Identities=23% Similarity=0.347 Sum_probs=33.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~~ 397 (529)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+. ++.+.+.+++
T Consensus 46 ~k~iLItGasg--gIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~ 91 (290)
T PRK06701 46 GKVALITGGDS--GIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRV 91 (290)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence 46799999998 9999999999999999988 543 3445554443
No 289
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=91.92 E-value=0.47 Score=53.19 Aligned_cols=44 Identities=14% Similarity=0.122 Sum_probs=38.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
..++|+++|+ | -+|+|+|..|.+.|.+|.+ |+.++.++|.+++.
T Consensus 378 ~~k~vlIlGa-G--GagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~ 423 (529)
T PLN02520 378 AGKLFVVIGA-G--GAGKALAYGAKEKGARVVIANRTYERAKELADAVG 423 (529)
T ss_pred CCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence 4578999999 5 7999999999999999888 88899999988763
No 290
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=91.87 E-value=0.23 Score=48.29 Aligned_cols=43 Identities=23% Similarity=0.326 Sum_probs=35.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 397 (529)
.+.++++|++| -||+++|+.|.++|.+|++ |++++.+++.+++
T Consensus 6 ~~~~lItG~s~--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l 51 (247)
T PRK12935 6 GKVAIVTGGAK--GIGKAITVALAQEGAKVVINYNSSKEAAENLVNEL 51 (247)
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHH
Confidence 46899999998 9999999999999999987 4566666665554
No 291
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.86 E-value=0.33 Score=50.38 Aligned_cols=161 Identities=17% Similarity=0.240 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 009674 283 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------------- 332 (529)
Q Consensus 283 ~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------------- 332 (529)
.+-+.-+..-.+.|++.|++..- |. +++.+++||.|- ++.++.= |++++.
T Consensus 42 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~ 121 (282)
T PRK14166 42 PASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFH 121 (282)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence 34455556667788999988543 33 233346788773 3555421 222331
Q ss_pred -----eeecC-C----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 009674 333 -----KVVDG-S----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 396 (529)
Q Consensus 333 -----rvv~G-n----sltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~ 396 (529)
|+..| + .-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|..|++ .++-
T Consensus 122 ~~N~g~l~~g~~~~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~--iVGkPla~lL~~~~atVt~chs~T-------- 191 (282)
T PRK14166 122 PINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASN--IVGRPMATMLLNAGATVSVCHIKT-------- 191 (282)
T ss_pred hhhhHHHhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--------
Confidence 22233 1 34666666544 34678999999997 9999999999999999998 2110
Q ss_pred Cccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCceeec-----CCcc
Q 009674 397 IPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAM 462 (529)
Q Consensus 397 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~~-----~~a~ 462 (529)
.++++ +++||+| +| +.++++.. ++|+++||+. +++. ++--||-+.. ...+
T Consensus 192 ------------~nl~~~~~~ADIvIsAvGkp~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd~~~v~~~a~~iT 255 (282)
T PRK14166 192 ------------KDLSLYTRQADLIIVAAGCVNLLRSDMV---KEGVIVVDVG-INRLESGKIVGDVDFEEVSKKSSYIT 255 (282)
T ss_pred ------------CCHHHHHhhCCEEEEcCCCcCccCHHHc---CCCCEEEEec-ccccCCCCeeCCCCHHHHHhhccEec
Confidence 12332 3566766 33 34777766 9999999998 6662 4446665332 1124
Q ss_pred ccCCCCc
Q 009674 463 IIPPSLS 469 (529)
Q Consensus 463 ~~P~~~~ 469 (529)
.||+.+-
T Consensus 256 PVPGGVG 262 (282)
T PRK14166 256 PVPGGVG 262 (282)
T ss_pred CCCCCch
Confidence 5666544
No 292
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=91.84 E-value=0.45 Score=52.58 Aligned_cols=61 Identities=26% Similarity=0.382 Sum_probs=45.7
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
|||.....+.--...+...+.|+++|+ | .+|++++..|.+.|.++.+ |+.++.+++.++.+
T Consensus 314 TD~~G~~~~l~~~~~~~~~k~vlIiGa-G--giG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~ 376 (477)
T PRK09310 314 TDGEGLFSLLKQKNIPLNNQHVAIVGA-G--GAAKAIATTLARAGAELLIFNRTKAHAEALASRCQ 376 (477)
T ss_pred cCHHHHHHHHHhcCCCcCCCEEEEEcC-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence 556555555432334445678999996 6 8999999999999999888 88888888877653
No 293
>PRK06483 dihydromonapterin reductase; Provisional
Probab=91.82 E-value=0.27 Score=47.58 Aligned_cols=35 Identities=23% Similarity=0.226 Sum_probs=30.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 389 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~ 389 (529)
.+.|+++|++| -||+++|+.|+++|.+|++ |++++
T Consensus 2 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~ 38 (236)
T PRK06483 2 PAPILITGAGQ--RIGLALAWHLLAQGQPVIVSYRTHYP 38 (236)
T ss_pred CceEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCCchh
Confidence 35799999998 9999999999999999988 65544
No 294
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=91.69 E-value=0.15 Score=51.13 Aligned_cols=34 Identities=21% Similarity=0.232 Sum_probs=29.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 390 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~ 390 (529)
.|+|+|||| .||+.+++.|.++|.+|.. |+.++.
T Consensus 1 ~ilVtGatG--~iG~~vv~~L~~~g~~V~~~~R~~~~~ 36 (285)
T TIGR03649 1 TILLTGGTG--KTASRIARLLQAASVPFLVASRSSSSS 36 (285)
T ss_pred CEEEEcCCC--hHHHHHHHHHHhCCCcEEEEeCCCccc
Confidence 389999999 9999999999999998888 776643
No 295
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=91.68 E-value=0.61 Score=46.47 Aligned_cols=150 Identities=17% Similarity=0.136 Sum_probs=84.4
Q ss_pred EEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeecccc-c-CcceEEEEc----CcC-C
Q 009674 357 LLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVG----DDL-T 426 (529)
Q Consensus 357 ~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwivg----~~~-~ 426 (529)
..+|.|| .||+++|+.|.+.|..|.+ |.++.++...+++... +...+.+ + +.++|+++= .+. .
T Consensus 4 ~~i~GtG--niG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~-----i~~~~~~dA~~~aDVVvLAVP~~a~~~v 76 (211)
T COG2085 4 IAIIGTG--NIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL-----ITGGSNEDAAALADVVVLAVPFEAIPDV 76 (211)
T ss_pred EEEeccC--hHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc-----cccCChHHHHhcCCEEEEeccHHHHHhH
Confidence 4566677 9999999999999999999 6777788777775544 2233333 4 677776621 111 1
Q ss_pred hhhhhcCCCCceeecccccCcc-CCCCCceee---cCCcc-----ccCCCCccccccccccCcchhHHHHHhhHhhhhcC
Q 009674 427 GKEQARAPKGTIFIPYTQIPPR-KLRKDCFYH---STPAM-----IIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEG 497 (529)
Q Consensus 427 ~~~q~~a~~G~~f~~~~~~~~~-~~R~dc~y~---~~~a~-----~~P~~~~~~~~~e~~~p~r~~~Ac~a~~~v~alEg 497 (529)
.+|.+.+-.|.++||.. +|-. ..++-=+|. ++.+. .+|++ +-+..+|+ +| ++.+..+..
T Consensus 77 ~~~l~~~~~~KIvID~t-np~~~~~~~~~~~~~~~~~saae~va~~lp~a-kVVkAFn~-i~---------a~~l~~~~~ 144 (211)
T COG2085 77 LAELRDALGGKIVIDAT-NPIEVNGEPGDLYLVPSEGSAAEIVAKLLPGA-KVVKAFNT-IP---------AAVLADLAK 144 (211)
T ss_pred HHHHHHHhCCeEEEecC-CCccccCCccccccCCCCCcHHHHHHHHCCCc-chhhhhcc-cC---------HHHhccCCC
Confidence 34454445688888887 5532 444333332 33332 24444 11111211 11 122222222
Q ss_pred CC-CC---ccchhhhhHHHHHHHHHhcCCccC
Q 009674 498 WD-LN---ECGQTMCDIHQVWHASLRHGFRPL 525 (529)
Q Consensus 498 w~-~~---e~G~iv~~id~i~~aa~kHGF~p~ 525 (529)
-. .. =||+-.+-..++.+++.+-||+|+
T Consensus 145 ~~~~~~v~vagDD~~Ak~~v~~L~~~iG~~~l 176 (211)
T COG2085 145 PGGRRDVLVAGDDAEAKAVVAELAEDIGFRPL 176 (211)
T ss_pred cCCceeEEEecCcHHHHHHHHHHHHhcCccee
Confidence 11 00 134334677889999999999994
No 296
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=91.68 E-value=1.9 Score=45.06 Aligned_cols=158 Identities=19% Similarity=0.254 Sum_probs=96.4
Q ss_pred HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 009674 296 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 346 (529)
Q Consensus 296 A~k~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~ 346 (529)
|.++|++++.|+.= +++|. |....-+.+.|+|+ ..++.|+.+.+ +=..++.
T Consensus 61 ~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~ 140 (304)
T TIGR00658 61 AYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRYVDGIMARVYKHEDVEELAKYASVPVINGLTDLFHPCQALADLLTII 140 (304)
T ss_pred HHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 45699999999643 33444 35566678888887 35677777543 1134555
Q ss_pred hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHhhC---ccccccceeeec-cccc--Ccc
Q 009674 347 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRI---PVEAQHNLVLST-SYAA--HKT 416 (529)
Q Consensus 347 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~---~l~~~~---~~~~~~~l~~~~-~~~~--~~~ 416 (529)
+.... +..+|.++|..+ .+.+..+.+|.+-|++|.+-..+.++ .+.+++ ..+.+.. +.++ ++++ +++
T Consensus 141 e~~g~l~g~~v~~vGd~~--~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~-~~~~~d~~~a~~~a 217 (304)
T TIGR00658 141 EHFGKLKGVKVVYVGDGN--NVCNSLMLAGAKLGMDVVVATPEGYEPDADIVKKAQEIAKENGGS-VELTHDPVEAVKGA 217 (304)
T ss_pred HHhCCCCCcEEEEEeCCC--chHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHHcCCe-EEEEcCHHHHhCCC
Confidence 55432 456899999985 89999999999999999993333332 111111 1112223 3333 7764 888
Q ss_pred eEEEEcCcCChh------hhhcCCCCceeecccccCcc---CCCCCce-eecCCcc
Q 009674 417 KIWLVGDDLTGK------EQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM 462 (529)
Q Consensus 417 ~vwivg~~~~~~------~q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a~ 462 (529)
+|+.+..|.... +.... +-+| +++.+ ..|+||. .|.+|+.
T Consensus 218 Dvvy~~~w~~~~~~~~~~~~~~~-----~~~y-~l~~~~l~~~~~~~ivmHplP~~ 267 (304)
T TIGR00658 218 DVIYTDVWVSMGEEDKKEERLKL-----FRPY-QVNEELMELAKPEVIFMHCLPAH 267 (304)
T ss_pred CEEEEcCcccCccccccHHHHHH-----hcCC-cCCHHHHhhcCCCCEEECCCCCC
Confidence 887775544211 11112 2233 37777 5678886 5888874
No 297
>PRK06720 hypothetical protein; Provisional
Probab=91.65 E-value=0.29 Score=46.49 Aligned_cols=44 Identities=18% Similarity=0.168 Sum_probs=36.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
..+.++++|+++ -||+++|+.|+++|.+|.+ |+.+..++..+++
T Consensus 15 ~gk~~lVTGa~~--GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l 60 (169)
T PRK06720 15 AGKVAIVTGGGI--GIGRNTALLLAKQGAKVIVTDIDQESGQATVEEI 60 (169)
T ss_pred CCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 356889999997 8999999999999999988 6666666665554
No 298
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=91.63 E-value=0.38 Score=50.91 Aligned_cols=39 Identities=18% Similarity=0.156 Sum_probs=34.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 392 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~ 392 (529)
+.+.|+|+||+| =||+.|+..|-++|..|.- |++++-++
T Consensus 5 ~~~~VcVTGAsG--fIgswivk~LL~rGY~V~gtVR~~~~~k~ 45 (327)
T KOG1502|consen 5 EGKKVCVTGASG--FIGSWIVKLLLSRGYTVRGTVRDPEDEKK 45 (327)
T ss_pred CCcEEEEeCCch--HHHHHHHHHHHhCCCEEEEEEcCcchhhh
Confidence 678999999999 9999999999999999987 88877433
No 299
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.62 E-value=0.32 Score=50.43 Aligned_cols=147 Identities=23% Similarity=0.263 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh
Q 009674 283 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS 339 (529)
Q Consensus 283 ~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns 339 (529)
++-+.-+..-.+.|++.|+++.- |. +++.++++|.|. ++.++.= |++++ .+=|||=+
T Consensus 42 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~ 121 (282)
T PRK14169 42 PASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDGFS 121 (282)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCcccCcccCC
Confidence 34445566667788899987654 33 233346788864 3555421 32232 12245543
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674 340 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 397 (529)
Q Consensus 340 ----------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~ 397 (529)
-|+..|++=+ +-.-++|+++|... -||+-+|..|.++|..|++ .++-
T Consensus 122 ~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~atVtichs~T--------- 190 (282)
T PRK14169 122 PVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSN--IVGRPLAGLMVNHDATVTIAHSKT--------- 190 (282)
T ss_pred hhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEECCCC---------
Confidence 3666666544 44678999999997 9999999999999999998 1111
Q ss_pred ccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCce
Q 009674 398 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 455 (529)
Q Consensus 398 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 455 (529)
.++++ +++||+| +| ..++++.. ++|+++||+. +.+. ++.-||-
T Consensus 191 -----------~~l~~~~~~ADIvI~AvG~p~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd 242 (282)
T PRK14169 191 -----------RNLKQLTKEADILVVAVGVPHFIGADAV---KPGAVVIDVG-ISRGADGKLLGDVD 242 (282)
T ss_pred -----------CCHHHHHhhCCEEEEccCCcCccCHHHc---CCCcEEEEee-ccccCCCCeeecCc
Confidence 12322 3566666 33 35777766 9999999998 6652 4445655
No 300
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.60 E-value=0.31 Score=49.11 Aligned_cols=46 Identities=20% Similarity=0.195 Sum_probs=35.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc---hhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC---KDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~---~~~~~~l~~~~~ 398 (529)
.+.++++|+++++-||+++|+.|+++|.+|.+ |+ +++.++++++++
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~ 60 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG 60 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC
Confidence 36789999972137999999999999999988 54 356666766653
No 301
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.54 E-value=0.43 Score=49.63 Aligned_cols=138 Identities=18% Similarity=0.207 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh--
Q 009674 285 INSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS-- 339 (529)
Q Consensus 285 in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns-- 339 (529)
-+.-+..-.+.|++.|++.. -|. +++.+++||.|- ++.++.= |++++. +=|||=+
T Consensus 52 S~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~ 131 (287)
T PRK14176 52 SKMYVRLKHKACERVGIRAEDQFLPADTTQEELLELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFHPY 131 (287)
T ss_pred hHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCccccccccChh
Confidence 34445556677888888654 443 344456777764 3554421 222331 2244433
Q ss_pred --------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccc
Q 009674 340 --------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVE 400 (529)
Q Consensus 340 --------------ltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~ 400 (529)
-|+..|++-+. -.-++|+|+|... -||+-+|..|.++|-.|++-+ .+..
T Consensus 132 N~g~l~~g~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~--iVGkPla~lL~~~~atVtv~h-s~T~--------- 199 (287)
T PRK14176 132 NMGKLMIGDEGLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSN--VVGKPMAAMLLNRNATVSVCH-VFTD--------- 199 (287)
T ss_pred hhhhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCc--ccHHHHHHHHHHCCCEEEEEe-ccCC---------
Confidence 26666665443 3678999999996 899999999999999999911 1111
Q ss_pred cccceeeeccccc--CcceEEEE--cC--cCChhhhhcCCCCceeecccccCc
Q 009674 401 AQHNLVLSTSYAA--HKTKIWLV--GD--DLTGKEQARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 401 ~~~~l~~~~~~~~--~~~~vwiv--g~--~~~~~~q~~a~~G~~f~~~~~~~~ 447 (529)
++++ ++++|+|+ |+ .++++. .++|++++|+. +..
T Consensus 200 ---------~l~~~~~~ADIvv~AvG~p~~i~~~~---vk~gavVIDvG-in~ 239 (287)
T PRK14176 200 ---------DLKKYTLDADILVVATGVKHLIKADM---VKEGAVIFDVG-ITK 239 (287)
T ss_pred ---------CHHHHHhhCCEEEEccCCccccCHHH---cCCCcEEEEec-ccc
Confidence 2222 35566553 43 466554 49999999998 554
No 302
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=91.54 E-value=0.86 Score=49.73 Aligned_cols=101 Identities=17% Similarity=0.123 Sum_probs=68.1
Q ss_pred eeeecCChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee
Q 009674 332 IKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL 407 (529)
Q Consensus 332 irvv~Gnsltaavv~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~ 407 (529)
-|.=+|.|.. -.+++.+. ...++|+|+|+- .||+.+|+.+...|.+|++ +++.|.+.-++ .+..
T Consensus 180 n~~g~g~s~~-~~i~r~t~~~l~GktVvViG~G---~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-~G~~------- 247 (413)
T cd00401 180 NLYGCRESLI-DGIKRATDVMIAGKVAVVAGYG---DVGKGCAQSLRGQGARVIVTEVDPICALQAAM-EGYE------- 247 (413)
T ss_pred ccchhchhhH-HHHHHhcCCCCCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-cCCE-------
Confidence 4555777753 44555443 356789999998 9999999999999999988 67777664433 2221
Q ss_pred eccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccc
Q 009674 408 STSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQ 444 (529)
Q Consensus 408 ~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~ 444 (529)
..+.++ +.++++| .| ..++.+....+++|.+++-+..
T Consensus 248 ~~~~~e~v~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~ 290 (413)
T cd00401 248 VMTMEEAVKEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGH 290 (413)
T ss_pred EccHHHHHcCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCC
Confidence 112232 4567766 33 3455666889999999987775
No 303
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=91.54 E-value=0.4 Score=45.77 Aligned_cols=79 Identities=13% Similarity=0.169 Sum_probs=46.6
Q ss_pred HHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc
Q 009674 341 AAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 413 (529)
Q Consensus 341 taavv~~~-----i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 413 (529)
|+..+++= ++..-++|+++|... -||+-++..|.++|-.|++ .+.+.++ +.+
T Consensus 19 Tp~aii~lL~~~~~~l~Gk~v~VvGrs~--~VG~Pla~lL~~~~atVt~~h~~T~~l~---~~~---------------- 77 (160)
T PF02882_consen 19 TPLAIIELLEYYGIDLEGKKVVVVGRSN--IVGKPLAMLLLNKGATVTICHSKTKNLQ---EIT---------------- 77 (160)
T ss_dssp HHHHHHHHHHHTT-STTT-EEEEE-TTT--TTHHHHHHHHHHTT-EEEEE-TTSSSHH---HHH----------------
T ss_pred CHHHHHHHHHhcCCCCCCCEEEEECCcC--CCChHHHHHHHhCCCeEEeccCCCCccc---cee----------------
Confidence 45555443 345678999999997 9999999999999999999 2111221 110
Q ss_pred CcceEEEEcCc----CChhhhhcCCCCceeeccc
Q 009674 414 HKTKIWLVGDD----LTGKEQARAPKGTIFIPYT 443 (529)
Q Consensus 414 ~~~~vwivg~~----~~~~~q~~a~~G~~f~~~~ 443 (529)
+.+||+|+.-+ ++++ +.++|+++||+.
T Consensus 78 ~~ADIVVsa~G~~~~i~~~---~ik~gavVIDvG 108 (160)
T PF02882_consen 78 RRADIVVSAVGKPNLIKAD---WIKPGAVVIDVG 108 (160)
T ss_dssp TTSSEEEE-SSSTT-B-GG---GS-TTEEEEE--
T ss_pred eeccEEeeeeccccccccc---cccCCcEEEecC
Confidence 35566663322 3333 348899999887
No 304
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.53 E-value=0.32 Score=50.53 Aligned_cols=139 Identities=24% Similarity=0.262 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh
Q 009674 283 EAINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS 339 (529)
Q Consensus 283 ~~in~~I~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns 339 (529)
.+-+.-+..-++.|++.|+++.-. - +++.+++||.|. ++.++.= |++++ .+=|||=+
T Consensus 41 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~ 120 (287)
T PRK14173 41 PASVSYVRLKDRQAKALGLRSQVEVLPESTSQEELLELIARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVDGFH 120 (287)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccC
Confidence 344455666777899999887543 3 233346788774 3555522 33233 12245543
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674 340 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 397 (529)
Q Consensus 340 ----------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~ 397 (529)
-|+..|++=+ +-.-++|+|+|.+. -||+-+|..|.++|-.|++ .++-
T Consensus 121 ~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~aTVtichs~T--------- 189 (287)
T PRK14173 121 PLNVGRLWMGGEALEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSN--IVGKPLAALLLREDATVTLAHSKT--------- 189 (287)
T ss_pred hhhhHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEeCCCC---------
Confidence 3666666644 33578999999998 9999999999999999998 1111
Q ss_pred ccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674 398 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 398 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 447 (529)
.++++ +++||+| +| .-++++.. ++|+++||+. +++
T Consensus 190 -----------~~l~~~~~~ADIvIsAvGkp~~i~~~~v---k~GavVIDVG-in~ 230 (287)
T PRK14173 190 -----------QDLPAVTRRADVLVVAVGRPHLITPEMV---RPGAVVVDVG-INR 230 (287)
T ss_pred -----------CCHHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-Ccc
Confidence 02222 3556655 44 34666666 9999999998 554
No 305
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.52 E-value=0.3 Score=49.00 Aligned_cols=43 Identities=16% Similarity=0.292 Sum_probs=32.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLR 396 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~---~~~~~l~~~ 396 (529)
+.++++|++++.-||+|+|+.|+++|.+|.+ |+. +..++++.+
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~ 54 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ 54 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhc
Confidence 5789999984236999999999999999988 542 334444443
No 306
>PRK08655 prephenate dehydrogenase; Provisional
Probab=91.43 E-value=0.48 Score=51.77 Aligned_cols=83 Identities=14% Similarity=0.201 Sum_probs=55.1
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCcCCh---
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLTG--- 427 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~~--- 427 (529)
+|.++|++| .+|+++|+.|.+.|.+|.+ |++++.+++..+.+... .++.++ .+++++|+--..+.
T Consensus 2 kI~IIGG~G--~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~------~~~~~e~~~~aDvVIlavp~~~~~~ 73 (437)
T PRK08655 2 KISIIGGTG--GLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY------ANDNIDAAKDADIVIISVPINVTED 73 (437)
T ss_pred EEEEEecCC--HHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee------ccCHHHHhccCCEEEEecCHHHHHH
Confidence 589999999 9999999999999999888 77777666665543221 224442 56666553211111
Q ss_pred --hh-hhcCCCCceeeccccc
Q 009674 428 --KE-QARAPKGTIFIPYTQI 445 (529)
Q Consensus 428 --~~-q~~a~~G~~f~~~~~~ 445 (529)
++ ...+++|+++++++-+
T Consensus 74 vl~~l~~~l~~~~iViDvsSv 94 (437)
T PRK08655 74 VIKEVAPHVKEGSLLMDVTSV 94 (437)
T ss_pred HHHHHHhhCCCCCEEEEcccc
Confidence 12 2235789999999853
No 307
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.36 E-value=0.3 Score=48.26 Aligned_cols=44 Identities=16% Similarity=0.218 Sum_probs=32.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
.+.|+++|+++++-||+++|+.|+++|.+|.+ |+ ++.++..+++
T Consensus 7 ~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~~ 52 (252)
T PRK06079 7 GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQKL 52 (252)
T ss_pred CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHhh
Confidence 36789999982117999999999999999998 65 3444333333
No 308
>PRK07856 short chain dehydrogenase; Provisional
Probab=91.28 E-value=0.24 Score=48.51 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=30.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 389 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~ 389 (529)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.++
T Consensus 6 ~k~~lItGas~--gIG~~la~~l~~~g~~v~~~~r~~~~ 42 (252)
T PRK07856 6 GRVVLVTGGTR--GIGAGIARAFLAAGATVVVCGRRAPE 42 (252)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 57899999998 9999999999999999998 65544
No 309
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.26 E-value=0.45 Score=46.97 Aligned_cols=32 Identities=13% Similarity=0.282 Sum_probs=27.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
.+.|+++|+++++-||+++|+.|+++|.+|.+
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~ 37 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFF 37 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHHHCCCeEEE
Confidence 46899999994337999999999999999987
No 310
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.26 E-value=0.33 Score=49.02 Aligned_cols=46 Identities=15% Similarity=0.247 Sum_probs=35.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~---~~~~~l~~~~~ 398 (529)
.+.|+++|+++++-||+|+|+.|+++|.+|.+ |++ ++++++.++++
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~ 55 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG 55 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC
Confidence 36889999972137999999999999999998 663 45666655554
No 311
>PRK07577 short chain dehydrogenase; Provisional
Probab=91.21 E-value=0.23 Score=47.69 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=29.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 388 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~ 388 (529)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.+
T Consensus 4 k~vlItG~s~--~iG~~ia~~l~~~G~~v~~~~r~~~ 38 (234)
T PRK07577 4 RTVLVTGATK--GIGLALSLRLANLGHQVIGIARSAI 38 (234)
T ss_pred CEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5799999998 9999999999999999988 5544
No 312
>PRK06940 short chain dehydrogenase; Provisional
Probab=91.21 E-value=0.44 Score=47.92 Aligned_cols=41 Identities=20% Similarity=0.261 Sum_probs=33.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
+.|+++|+ | -||+++|+.|+ +|.+|.+ |+.++++++.+++.
T Consensus 3 k~~lItGa-~--gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~ 45 (275)
T PRK06940 3 EVVVVIGA-G--GIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLR 45 (275)
T ss_pred CEEEEECC-C--hHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHH
Confidence 46788887 5 79999999997 7999998 88888877776653
No 313
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=91.13 E-value=0.29 Score=48.15 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=28.7
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
...+.++++|++| -||+++|+.|+++|.+|.+
T Consensus 8 l~~k~~lItG~~~--gIG~a~a~~l~~~G~~vv~ 39 (253)
T PRK08993 8 LEGKVAVVTGCDT--GLGQGMALGLAEAGCDIVG 39 (253)
T ss_pred CCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence 3456899999998 9999999999999999987
No 314
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=91.08 E-value=0.27 Score=51.00 Aligned_cols=64 Identities=13% Similarity=0.158 Sum_probs=43.8
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc---cCcceEEE--EcCcCChh
Q 009674 356 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA---AHKTKIWL--VGDDLTGK 428 (529)
Q Consensus 356 V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~---~~~~~vwi--vg~~~~~~ 428 (529)
|+++|+|| -||++++..|++.|-+|++ |+..+-+.. +....+ + ...+. +.++|+|| +|+.|-.+
T Consensus 1 IliTGgTG--lIG~~L~~~L~~~gh~v~iltR~~~~~~~~---~~~~v~-~---~~~~~~~~~~~~DavINLAG~~I~~r 71 (297)
T COG1090 1 ILITGGTG--LIGRALTARLRKGGHQVTILTRRPPKASQN---LHPNVT-L---WEGLADALTLGIDAVINLAGEPIAER 71 (297)
T ss_pred CeEecccc--chhHHHHHHHHhCCCeEEEEEcCCcchhhh---cCcccc-c---cchhhhcccCCCCEEEECCCCccccc
Confidence 57999999 9999999999999999999 766655422 111110 1 22222 13577777 88888766
No 315
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=91.01 E-value=0.44 Score=48.73 Aligned_cols=92 Identities=12% Similarity=0.055 Sum_probs=56.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc-------------ccc---ccceeeec-cccc-
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEA---QHNLVLST-SYAA- 413 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~-------------~~~---~~~l~~~~-~~~~- 413 (529)
++|.++|+- .+|+++|..|++.|.+|.+ ++.+++++.++++. .+. .......+ ++++
T Consensus 5 ~~V~vIG~G---~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 81 (295)
T PLN02545 5 KKVGVVGAG---QMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEEL 81 (295)
T ss_pred CEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHh
Confidence 469999986 9999999999999999999 77777764332211 100 00112223 5554
Q ss_pred CcceEEEE--cCcCChhh------hhcCCCCceee-cccccCcc
Q 009674 414 HKTKIWLV--GDDLTGKE------QARAPKGTIFI-PYTQIPPR 448 (529)
Q Consensus 414 ~~~~vwiv--g~~~~~~~------q~~a~~G~~f~-~~~~~~~~ 448 (529)
++++++|. -+..+-++ ...++++++++ ..|-+++.
T Consensus 82 ~~aD~Vieav~e~~~~k~~v~~~l~~~~~~~~il~s~tS~i~~~ 125 (295)
T PLN02545 82 RDADFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSSISIT 125 (295)
T ss_pred CCCCEEEEcCccCHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence 77877663 11111111 12478898886 67667766
No 316
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.98 E-value=0.49 Score=46.49 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=27.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
.+.|+++|++|.+-||+++|+.|.++|.+|.+
T Consensus 5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~ 36 (256)
T PRK12748 5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFF 36 (256)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEE
Confidence 36799999994236999999999999999988
No 317
>PRK08226 short chain dehydrogenase; Provisional
Probab=90.97 E-value=0.4 Score=47.14 Aligned_cols=34 Identities=15% Similarity=0.367 Sum_probs=30.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 388 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~ 388 (529)
.+.++++|++| -||+++|+.|+++|.+|.+ |+++
T Consensus 6 ~~~~lItG~s~--giG~~la~~l~~~G~~Vv~~~r~~~ 41 (263)
T PRK08226 6 GKTALITGALQ--GIGEGIARVFARHGANLILLDISPE 41 (263)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCCHH
Confidence 46899999998 9999999999999999998 5543
No 318
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.93 E-value=0.42 Score=49.72 Aligned_cols=146 Identities=20% Similarity=0.236 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeecC-CCCcc-------------------
Q 009674 284 AINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLK------------------- 331 (529)
Q Consensus 284 ~in~~I~~Ai~~A~k~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p~~L~------------------- 331 (529)
+-+.-++.-++.|++.|++..-.= +++.+++||.|- |+.++.= |++++
T Consensus 45 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~LN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~ 124 (288)
T PRK14171 45 ASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLISKINELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFHP 124 (288)
T ss_pred cHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccCCc
Confidence 344445566778888888765432 334446777774 3555421 22222
Q ss_pred ---eeeecCC-----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674 332 ---IKVVDGS-----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 397 (529)
Q Consensus 332 ---irvv~Gn-----sltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~ 397 (529)
=|+..|+ .-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|-.|++ .++
T Consensus 125 ~N~g~l~~g~~~~~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~--iVGkPla~lL~~~~ATVtichs~---------- 192 (288)
T PRK14171 125 LNVGYLHSGISQGFIPCTALGCLAVIKKYEPNLTGKNVVIIGRSN--IVGKPLSALLLKENCSVTICHSK---------- 192 (288)
T ss_pred cchhhhhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCC----------
Confidence 1233443 34666666544 33578999999998 9999999999999999998 211
Q ss_pred ccccccceeeeccccc--CcceEEE--EcC--cCChhhhhcCCCCceeecccccCcc---CCCCCce
Q 009674 398 PVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 455 (529)
Q Consensus 398 ~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 455 (529)
..++++ +++||+| +|+ .++++.. ++|+++||+. +.+. ++.-|+-
T Consensus 193 ----------T~~L~~~~~~ADIvV~AvGkp~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd 245 (288)
T PRK14171 193 ----------THNLSSITSKADIVVAAIGSPLKLTAEYF---NPESIVIDVG-INRISGNKIIGDVD 245 (288)
T ss_pred ----------CCCHHHHHhhCCEEEEccCCCCccCHHHc---CCCCEEEEee-ccccCCCCeECCcc
Confidence 112332 3566766 443 4677666 9999999998 7663 4446655
No 319
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.80 E-value=0.42 Score=47.40 Aligned_cols=46 Identities=17% Similarity=0.234 Sum_probs=34.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhC
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRI 397 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~---~~~~l~~~~ 397 (529)
..+.|+++|+++++-||+++|+.|+++|.+|.+ |+.+ +.+++++++
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~ 59 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL 59 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh
Confidence 357899999983126999999999999999988 6543 345555554
No 320
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=90.72 E-value=0.44 Score=45.67 Aligned_cols=40 Identities=23% Similarity=0.327 Sum_probs=31.4
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 009674 356 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 397 (529)
Q Consensus 356 V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~~ 397 (529)
|+++|++| -||+.+|+.|+++|.+|.+ |+. ++.+.+++++
T Consensus 1 vlItG~~g--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 43 (239)
T TIGR01830 1 ALVTGASR--GIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEEL 43 (239)
T ss_pred CEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence 57899998 9999999999999999888 443 4555555443
No 321
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=90.71 E-value=0.57 Score=47.70 Aligned_cols=85 Identities=11% Similarity=0.119 Sum_probs=53.9
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-cccc-CcceEEEEcCcCCh---
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA-HKTKIWLVGDDLTG--- 427 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~-~~~~vwivg~~~~~--- 427 (529)
+|.++| .| .+|.++|+.|.+.|.+|.. ++++..++++++-... ..+ +.++ ++++++|+--..+.
T Consensus 2 ~I~IIG-~G--~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~------~~~~~~~~~~~aDlVilavp~~~~~~ 72 (279)
T PRK07417 2 KIGIVG-LG--LIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVD------EASTDLSLLKDCDLVILALPIGLLLP 72 (279)
T ss_pred eEEEEe-ec--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcc------cccCCHhHhcCCCEEEEcCCHHHHHH
Confidence 588999 56 9999999999999999988 7778888776541100 122 3333 56777553111100
Q ss_pred --hhh-hcCCCCceeecccccCcc
Q 009674 428 --KEQ-ARAPKGTIFIPYTQIPPR 448 (529)
Q Consensus 428 --~~q-~~a~~G~~f~~~~~~~~~ 448 (529)
++. ..+++++++++++-+++.
T Consensus 73 ~~~~l~~~l~~~~ii~d~~Svk~~ 96 (279)
T PRK07417 73 PSEQLIPALPPEAIVTDVGSVKAP 96 (279)
T ss_pred HHHHHHHhCCCCcEEEeCcchHHH
Confidence 122 234678888888766654
No 322
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.69 E-value=0.66 Score=48.24 Aligned_cols=139 Identities=19% Similarity=0.210 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh
Q 009674 283 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS 339 (529)
Q Consensus 283 ~~in~~I~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns 339 (529)
.+-+.-++.-++.|++.|++. +-|- ++..++++|.|- ++.++.= |++++ .+=|||=+
T Consensus 45 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~ 124 (285)
T PRK10792 45 PASQVYVASKRKACEEVGFVSRSYDLPETTSEAELLALIDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVDGFH 124 (285)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCccC
Confidence 344555666777889999884 3443 233336788773 3555422 22232 12234432
Q ss_pred ----------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674 340 ----------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 397 (529)
Q Consensus 340 ----------------ltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~ 397 (529)
-|++.|++-+. -..++|+|+|... -+|+-+|..|.++|-.|++ .++ ..
T Consensus 125 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~--iVG~Pla~lL~~~~atVtv~hs~--T~------ 194 (285)
T PRK10792 125 PYNVGRLAQRIPLLRPCTPRGIMTLLERYGIDTYGLNAVVVGASN--IVGRPMSLELLLAGCTVTVCHRF--TK------ 194 (285)
T ss_pred hhhHhHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCc--ccHHHHHHHHHHCCCeEEEEECC--CC------
Confidence 36777766553 3578999999996 8999999999999999999 211 01
Q ss_pred ccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674 398 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 398 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 447 (529)
++++ +.++++| +| +.++++.. ++|++++|+. +.+
T Consensus 195 ------------~l~~~~~~ADIvi~avG~p~~v~~~~v---k~gavVIDvG-in~ 234 (285)
T PRK10792 195 ------------NLRHHVRNADLLVVAVGKPGFIPGEWI---KPGAIVIDVG-INR 234 (285)
T ss_pred ------------CHHHHHhhCCEEEEcCCCcccccHHHc---CCCcEEEEcc-ccc
Confidence 2332 3556655 32 35666555 9999999998 655
No 323
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=90.66 E-value=0.74 Score=40.76 Aligned_cols=86 Identities=13% Similarity=0.157 Sum_probs=48.6
Q ss_pred EEEEecccCchhhHHHHHHHHhc-cCcEEEe---cchhhHHHHHhhCcccccccee-eec--ccccCcceEEE--EcCcC
Q 009674 355 HVLLRGTVTANKVANAVASSLCQ-MGIKVAT---ICKDDYEKLKLRIPVEAQHNLV-LST--SYAAHKTKIWL--VGDDL 425 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~-~~~~v~l---~~~~~~~~l~~~~~~~~~~~l~-~~~--~~~~~~~~vwi--vg~~~ 425 (529)
+|.++|++| .+|+.++..|.+ +++++.. +++++-+.++..-+. .++..+ ..+ +++..++++++ +++..
T Consensus 1 ki~iiG~~g--~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~ 77 (122)
T smart00859 1 KVAIVGATG--YVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPH-LKGEVVLELEPEDFEELAVDIVFLALPHGV 77 (122)
T ss_pred CEEEECCCC--hHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcc-cccccccccccCChhhcCCCEEEEcCCcHH
Confidence 478999999 999999999996 6877666 333222233222111 100101 111 22213566654 45444
Q ss_pred Chh----hhhcCCCCceeeccc
Q 009674 426 TGK----EQARAPKGTIFIPYT 443 (529)
Q Consensus 426 ~~~----~q~~a~~G~~f~~~~ 443 (529)
..+ -+..+.+|.+++|.+
T Consensus 78 ~~~~~~~~~~~~~~g~~viD~s 99 (122)
T smart00859 78 SKEIAPLLPKAAEAGVKVIDLS 99 (122)
T ss_pred HHHHHHHHHhhhcCCCEEEECC
Confidence 444 233468999999988
No 324
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=90.66 E-value=0.69 Score=48.03 Aligned_cols=92 Identities=13% Similarity=0.097 Sum_probs=60.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc-----cc--ccceeeeccccc--CcceEEE--
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV-----EA--QHNLVLSTSYAA--HKTKIWL-- 420 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~-----~~--~~~l~~~~~~~~--~~~~vwi-- 420 (529)
.+|.++|+- .+|.++|..|++.|.+|++ |++++.+.+++.-.. +. ..+....++.++ ++++++|
T Consensus 5 m~I~iIG~G---~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~ 81 (328)
T PRK14618 5 MRVAVLGAG---AWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVA 81 (328)
T ss_pred CeEEEECcC---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEE
Confidence 468999986 9999999999999999999 888888888764211 10 011112225543 5666655
Q ss_pred EcCcCChhhhhcCCCCceeecccc-cCcc
Q 009674 421 VGDDLTGKEQARAPKGTIFIPYTQ-IPPR 448 (529)
Q Consensus 421 vg~~~~~~~q~~a~~G~~f~~~~~-~~~~ 448 (529)
+-..-..+-...+++++.++.++. ++|.
T Consensus 82 v~~~~~~~v~~~l~~~~~vi~~~~Gi~~~ 110 (328)
T PRK14618 82 VPSKALRETLAGLPRALGYVSCAKGLAPD 110 (328)
T ss_pred CchHHHHHHHHhcCcCCEEEEEeeccccC
Confidence 222222333345688999999887 6654
No 325
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.66 E-value=0.32 Score=50.73 Aligned_cols=100 Identities=20% Similarity=0.183 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh
Q 009674 283 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS 339 (529)
Q Consensus 283 ~~in~~I~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns 339 (529)
.+-+.-+...++.|++.|+++ .-|- +++.+++||.|- ++.++.= |++++ .+=|||=+
T Consensus 44 ~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~ 123 (296)
T PRK14188 44 PASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLH 123 (296)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCC
Confidence 345555677788999999984 4443 223336788883 3555522 33343 12245543
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 340 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 340 ----------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
-|+..|++=+ +-.-++|.++|.++ -+|+.+|+.|.++|..|++
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~--~mG~PmA~~L~~~g~tVtv 187 (296)
T PRK14188 124 VVNAGRLATGETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSN--LVGKPMAQLLLAANATVTI 187 (296)
T ss_pred hhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCc--chHHHHHHHHHhCCCEEEE
Confidence 2566666443 44688999999998 9999999999999999999
No 326
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=90.53 E-value=0.46 Score=49.31 Aligned_cols=37 Identities=16% Similarity=0.142 Sum_probs=31.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 392 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~ 392 (529)
++|+++|++| =||+++|+.|.++|.+|+. |+++....
T Consensus 5 k~ilItGatG--~IG~~l~~~L~~~G~~V~~~~r~~~~~~~ 43 (349)
T TIGR02622 5 KKVLVTGHTG--FKGSWLSLWLLELGAEVYGYSLDPPTSPN 43 (349)
T ss_pred CEEEEECCCC--hhHHHHHHHHHHCCCEEEEEeCCCccchh
Confidence 5799999999 9999999999999999987 55544333
No 327
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=90.50 E-value=0.63 Score=50.17 Aligned_cols=125 Identities=14% Similarity=0.142 Sum_probs=78.4
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc--c---------cccceeeecccc-c-CcceEE
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--E---------AQHNLVLSTSYA-A-HKTKIW 419 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~--~---------~~~~l~~~~~~~-~-~~~~vw 419 (529)
+|.|+|.. -+|..+|..|++ |.+|+. +++++.+++++.... + ....+...++.. + ++++++
T Consensus 2 kI~VIGlG---yvGl~~A~~lA~-G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~v 77 (388)
T PRK15057 2 KITISGTG---YVGLSNGLLIAQ-NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYV 77 (388)
T ss_pred EEEEECCC---HHHHHHHHHHHh-CCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEE
Confidence 58888877 999999987775 999998 899999999875221 0 111211222333 2 567664
Q ss_pred E--EcCcCChh--------------hhhcCCCCceeecccccCcc---CCCCCc---eeecCCccccCCCCccccccccc
Q 009674 420 L--VGDDLTGK--------------EQARAPKGTIFIPYTQIPPR---KLRKDC---FYHSTPAMIIPPSLSNMHSCENW 477 (529)
Q Consensus 420 i--vg~~~~~~--------------~q~~a~~G~~f~~~~~~~~~---~~R~dc---~y~~~~a~~~P~~~~~~~~~e~~ 477 (529)
| |++.++.+ +..++++|.+++.-|-+||. ++++.. -...+|..-.|++.- -++-
T Consensus 78 ii~Vpt~~~~k~~~~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgtt~~l~~~~~~~~v~~~PE~l~~G~a~----~d~~ 153 (388)
T PRK15057 78 IIATPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAMHKKYRTENIIFSPEFLREGKAL----YDNL 153 (388)
T ss_pred EEeCCCCCccCCCCcChHHHHHHHHHHHhcCCCCEEEEeeecCCchHHHHHHHhhcCcEEECcccccCCccc----cccc
Confidence 4 66554432 22345899999999999998 332222 123356666666532 2345
Q ss_pred cCcchhHHHH
Q 009674 478 LGRRVMSAWR 487 (529)
Q Consensus 478 ~p~r~~~Ac~ 487 (529)
.|+|+|.+|-
T Consensus 154 ~p~rvv~G~~ 163 (388)
T PRK15057 154 HPSRIVIGER 163 (388)
T ss_pred CCCEEEEEcC
Confidence 6888877643
No 328
>PRK06523 short chain dehydrogenase; Provisional
Probab=90.47 E-value=0.31 Score=47.85 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=30.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 388 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~ 388 (529)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+++
T Consensus 8 ~~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~r~~~ 44 (260)
T PRK06523 8 AGKRALVTGGTK--GIGAATVARLLEAGARVVTTARSRP 44 (260)
T ss_pred CCCEEEEECCCC--chhHHHHHHHHHCCCEEEEEeCChh
Confidence 346899999998 9999999999999999988 5543
No 329
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=90.40 E-value=0.72 Score=42.61 Aligned_cols=65 Identities=23% Similarity=0.293 Sum_probs=42.4
Q ss_pred EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccccccce--eee--ccccc-CcceEEEE
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQHNL--VLS--TSYAA-HKTKIWLV 421 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~~~~~l--~~~--~~~~~-~~~~vwiv 421 (529)
+|.++||+| .||+++|..|+..+. ++.| +++++.+....++..-..... ..+ .++++ ++++|+|+
T Consensus 2 KV~IiGa~G--~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvi 75 (141)
T PF00056_consen 2 KVAIIGAAG--NVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVI 75 (141)
T ss_dssp EEEEESTTS--HHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEE
T ss_pred EEEEECCCC--hHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEE
Confidence 789999998 999999999995554 3554 666666655544333211111 122 35666 89988775
No 330
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.39 E-value=0.5 Score=48.93 Aligned_cols=146 Identities=22% Similarity=0.279 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh--
Q 009674 285 INSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS-- 339 (529)
Q Consensus 285 in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns-- 339 (529)
-+.-+..-.+.|++.|++..- |. +++.+++||.|. ++.++.= |++++ .+=|||=+
T Consensus 46 s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~ 125 (278)
T PRK14172 46 SIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFI 125 (278)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccCccCHh
Confidence 333344556778888887753 32 344447788774 3555532 33233 12244432
Q ss_pred --------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCcc
Q 009674 340 --------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPV 399 (529)
Q Consensus 340 --------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~~ 399 (529)
-|++.|++=+ +-.-++|+++|... -||+-+|..|-++|..|++ .++
T Consensus 126 n~g~l~~g~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~AtVt~chs~------------ 191 (278)
T PRK14172 126 SVGKFYKGEKCFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSN--IVGKPVAQLLLNENATVTICHSK------------ 191 (278)
T ss_pred hHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCC------------
Confidence 3566665543 44678999999997 9999999999999999999 211
Q ss_pred ccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc--CCCCCcee
Q 009674 400 EAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCFY 456 (529)
Q Consensus 400 ~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~y 456 (529)
..++++ ++++|+| +| +.++++.. ++|+++||+- +++. ++--|+-+
T Consensus 192 --------T~~l~~~~~~ADIvIsAvGkp~~i~~~~i---k~gavVIDvG-in~~~gkl~GDvd~ 244 (278)
T PRK14172 192 --------TKNLKEVCKKADILVVAIGRPKFIDEEYV---KEGAIVIDVG-TSSVNGKITGDVNF 244 (278)
T ss_pred --------CCCHHHHHhhCCEEEEcCCCcCccCHHHc---CCCcEEEEee-ccccCCceeeeccH
Confidence 012332 3566666 33 35777776 9999999996 5553 45556643
No 331
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=90.37 E-value=0.78 Score=44.21 Aligned_cols=29 Identities=24% Similarity=0.366 Sum_probs=27.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 3 k~vlItG~s~--~iG~~la~~l~~~g~~vi~ 31 (245)
T PRK12824 3 KIALVTGAKR--GIGSAIARELLNDGYRVIA 31 (245)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHcCCEEEE
Confidence 4789999998 9999999999999999988
No 332
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=90.31 E-value=0.24 Score=51.84 Aligned_cols=66 Identities=17% Similarity=0.290 Sum_probs=42.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcE--EEe--cchhhHHHHHhhCcccc---ccceeee-ccccc-CcceEEEE
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIK--VAT--ICKDDYEKLKLRIPVEA---QHNLVLS-TSYAA-HKTKIWLV 421 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~--v~l--~~~~~~~~l~~~~~~~~---~~~l~~~-~~~~~-~~~~vwiv 421 (529)
+.+|.++|| | .||+++|..|+.+|.. +.| .++++.+-...++.... ..+-+.. ++|++ ++++|+|+
T Consensus 3 ~~Ki~IiGa-G--~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~~~~adivvi 77 (312)
T cd05293 3 RNKVTVVGV-G--QVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVTANSKVVIV 77 (312)
T ss_pred CCEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHHhCCCCEEEE
Confidence 458999997 8 9999999999966664 444 55565553333322211 1122444 47877 89988775
No 333
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=90.30 E-value=1.6 Score=46.36 Aligned_cols=163 Identities=15% Similarity=0.185 Sum_probs=99.2
Q ss_pred HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 009674 296 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 346 (529)
Q Consensus 296 A~k~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~ 346 (529)
+.++|.+++.|+.= .++|. |.+..-..+.|+|+ ...++|+.|.+ +=..++.
T Consensus 68 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~y~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~ 147 (334)
T PRK01713 68 AYDQGAQVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQSIVNELAEYAGVPVFNGLTDEFHPTQMLADVLTMI 147 (334)
T ss_pred HHHcCCeEEEcCCccccCCCCcCHHHHHHHHHHhCCEEEEEcCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 36899999999743 44454 35556677888886 35789998865 1246676
Q ss_pred hcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH------HHHhhCccccccceeeec-cccc--Cc
Q 009674 347 NSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE------KLKLRIPVEAQHNLVLST-SYAA--HK 415 (529)
Q Consensus 347 ~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~------~l~~~~~~~~~~~l~~~~-~~~~--~~ 415 (529)
+... .+..+|+++|... +.+++..+..|++-|.++.+-.++.|+ +..++...+.+.. +.++ ++++ ++
T Consensus 148 e~~g~~l~gl~ia~vGD~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~-~~~~~d~~~a~~~ 225 (334)
T PRK01713 148 ENCDKPLSEISYVYIGDAR-NNMGNSLLLIGAKLGMDVRICAPKALLPEASLVEMCEKFAKESGAR-ITVTDDIDKAVKG 225 (334)
T ss_pred HHcCCCcCCcEEEEECCCc-cCHHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHHcCCe-EEEEcCHHHHhCC
Confidence 6543 2456999999973 369999999999999999993333332 1112222223333 3343 7774 78
Q ss_pred ceEEEEcCcCChhhhhc--CCCCceeecccccCcc--C-C-CCCcee-ecCCc
Q 009674 416 TKIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR--K-L-RKDCFY-HSTPA 461 (529)
Q Consensus 416 ~~vwivg~~~~~~~q~~--a~~G~~f~~~~~~~~~--~-~-R~dc~y-~~~~a 461 (529)
++|+..+-|.+-.++.. ...-..|-||. ++.+ + . |+||.+ |.+|+
T Consensus 226 aDvVyt~~w~sm~~~~~~~~~~~~~~~~y~-v~~ell~~a~k~~aivmH~lP~ 277 (334)
T PRK01713 226 VDFVHTDVWVSMGEPLETWGERIKLLMPYQ-VTPELMKRTGNPKVKFMHCLPA 277 (334)
T ss_pred CCEEEEcceeecccchhhHHHHHHhccCCc-CCHHHHhccCCCCCEEECCCCC
Confidence 88877755543211100 00001344553 8887 3 3 578875 77776
No 334
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.28 E-value=0.49 Score=49.46 Aligned_cols=139 Identities=18% Similarity=0.204 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh
Q 009674 283 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS 339 (529)
Q Consensus 283 ~~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns 339 (529)
.+-+.-+...++.|++.|++.. -|- +++.++++|.|- |+.++.= |++++ .+=|||=|
T Consensus 44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~ 123 (297)
T PRK14186 44 PASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLH 123 (297)
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence 3445556667778999998875 443 223336677754 3555422 23233 12244433
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674 340 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 397 (529)
Q Consensus 340 ----------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~ 397 (529)
-|+.+|++=+ +-.-++|+++|.+. -||+-+|..|.++|..|++ .++.
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~--iVGkPla~lL~~~~atVtv~hs~T--------- 192 (297)
T PRK14186 124 PLNLGRLVKGEPGLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSI--LVGKPLALMLLAANATVTIAHSRT--------- 192 (297)
T ss_pred hhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCCC---------
Confidence 3566666544 33578999999997 9999999999999999998 2111
Q ss_pred ccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674 398 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 398 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 447 (529)
.++++ +++||+| +| +.++++.. ++|+++||+. +.+
T Consensus 193 -----------~~l~~~~~~ADIvIsAvGkp~~i~~~~i---k~gavVIDvG-in~ 233 (297)
T PRK14186 193 -----------QDLASITREADILVAAAGRPNLIGAEMV---KPGAVVVDVG-IHR 233 (297)
T ss_pred -----------CCHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence 12222 3566666 34 34676666 9999999998 554
No 335
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=90.18 E-value=0.3 Score=51.80 Aligned_cols=66 Identities=18% Similarity=0.214 Sum_probs=53.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-cccc--CcceEEE
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA--HKTKIWL 420 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~--~~~~vwi 420 (529)
.....+.|||| =.|.-||++||++|.+-.| ||.++++.|.++++.+.+..=+-+- .+++ ...+|++
T Consensus 6 e~d~iiYGAtG--y~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVl 76 (382)
T COG3268 6 EYDIIIYGATG--YAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVL 76 (382)
T ss_pred ceeEEEEcccc--chhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEE
Confidence 45788999999 9999999999999999988 9999999999999998876533211 3333 4557777
No 336
>PLN02778 3,5-epimerase/4-reductase
Probab=90.17 E-value=0.43 Score=48.96 Aligned_cols=36 Identities=17% Similarity=0.197 Sum_probs=31.2
Q ss_pred hcCcCC-CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 347 NSLPKT-TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 347 ~~i~~~-~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
++.|++ +.+|+|+|++| =||+.+++.|.++|.+|+.
T Consensus 2 ~~~~~~~~~kiLVtG~tG--fiG~~l~~~L~~~g~~V~~ 38 (298)
T PLN02778 2 NGTAGSATLKFLIYGKTG--WIGGLLGKLCQEQGIDFHY 38 (298)
T ss_pred CCCCCCCCCeEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence 456663 56899999999 9999999999999999975
No 337
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=90.15 E-value=0.56 Score=49.47 Aligned_cols=83 Identities=22% Similarity=0.148 Sum_probs=57.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEE--------Ec
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--------VG 422 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--------vg 422 (529)
.++|-++|.- .||+++|+.|..-|.+|+..++..-++....... ....++++ +.+|+++ --
T Consensus 142 gkTvGIiG~G---~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~------~~~~~Ld~lL~~sDiv~lh~PlT~eT~ 212 (324)
T COG0111 142 GKTVGIIGLG---RIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGV------VGVDSLDELLAEADILTLHLPLTPETR 212 (324)
T ss_pred CCEEEEECCC---HHHHHHHHHHHhCCCeEEEECCCCchhhhccccc------eecccHHHHHhhCCEEEEcCCCCcchh
Confidence 5688899977 9999999999999999999333222211111111 12445665 5666654 23
Q ss_pred CcCChhhhhcCCCCceeecccc
Q 009674 423 DDLTGKEQARAPKGTIFIPYTQ 444 (529)
Q Consensus 423 ~~~~~~~q~~a~~G~~f~~~~~ 444 (529)
..|+.++..+||+|++||-++|
T Consensus 213 g~i~~~~~a~MK~gailIN~aR 234 (324)
T COG0111 213 GLINAEELAKMKPGAILINAAR 234 (324)
T ss_pred cccCHHHHhhCCCCeEEEECCC
Confidence 4577889999999999999999
No 338
>PRK08324 short chain dehydrogenase; Validated
Probab=90.11 E-value=0.58 Score=53.73 Aligned_cols=45 Identities=18% Similarity=0.177 Sum_probs=39.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
.+.|+|+|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++..
T Consensus 422 gk~vLVTGasg--gIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~ 468 (681)
T PRK08324 422 GKVALVTGAAG--GIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG 468 (681)
T ss_pred CCEEEEecCCC--HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhc
Confidence 47899999998 9999999999999999988 888888888777544
No 339
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.07 E-value=0.58 Score=48.57 Aligned_cols=161 Identities=22% Similarity=0.271 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh-
Q 009674 284 AINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS- 339 (529)
Q Consensus 284 ~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns- 339 (529)
+-+.-+...++.|++.|++.. -|. +++.+++||.|- ++.++.= |++++. +=|||=+
T Consensus 44 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~ 123 (281)
T PRK14183 44 ASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETIAMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGFHP 123 (281)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCccCeEEEeCCCCCCCCHHHHHhccCchhcccccCh
Confidence 444455666778899998754 332 333346788773 3555522 332331 2244443
Q ss_pred ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCcc
Q 009674 340 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPV 399 (529)
Q Consensus 340 ---------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~ 399 (529)
-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|-.|++ ...+-+
T Consensus 124 ~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--~VG~Pla~lL~~~~AtVti-~hs~T~-------- 192 (281)
T PRK14183 124 YNVGRLVTGLDGFVPCTPLGVMELLEEYEIDVKGKDVCVVGASN--IVGKPMAALLLNANATVDI-CHIFTK-------- 192 (281)
T ss_pred hhhhHHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEE-eCCCCc--------
Confidence 3667666544 44688999999997 9999999999999999998 111111
Q ss_pred ccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCceeec-----CCccccC
Q 009674 400 EAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAMIIP 465 (529)
Q Consensus 400 ~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~~-----~~a~~~P 465 (529)
++++ +.+||+| +| +.++++.. ++|+++||+. +.+. ++--|+-+.+ ...+.||
T Consensus 193 ----------~l~~~~~~ADIvV~AvGkp~~i~~~~v---k~gavvIDvG-in~~~~gkl~GDVd~~~~~~~a~~iTPVP 258 (281)
T PRK14183 193 ----------DLKAHTKKADIVIVGVGKPNLITEDMV---KEGAIVIDIG-INRTEDGRLVGDVDFENVAKKCSYITPVP 258 (281)
T ss_pred ----------CHHHHHhhCCEEEEecCcccccCHHHc---CCCcEEEEee-ccccCCCCeECCccHHHHHhhceEecCCC
Confidence 1221 3555655 34 34666666 9999999998 6652 4445555332 1124566
Q ss_pred CCCc
Q 009674 466 PSLS 469 (529)
Q Consensus 466 ~~~~ 469 (529)
+.+-
T Consensus 259 GGVG 262 (281)
T PRK14183 259 GGVG 262 (281)
T ss_pred CCCh
Confidence 6554
No 340
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=90.05 E-value=1.9 Score=45.09 Aligned_cols=162 Identities=18% Similarity=0.224 Sum_probs=95.6
Q ss_pred HHHHcCCcEEEecc----ccccccc-------ccCCceeeecCCC---------CcceeeecCCh---------hHHHHH
Q 009674 295 EADAKGVKVISLGL----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVV 345 (529)
Q Consensus 295 ~A~k~G~kv~~LG~----ln~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv 345 (529)
-|.++|.+++.|+. +.|+|.+ ....-+.+.|+|+ ..++.|+.+-+ +=+.++
T Consensus 64 A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~~D~iv~R~~~~~~~~~~a~~~~vPVINag~~~~HPtQaL~Dl~Ti 143 (304)
T PRK00779 64 GMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRYVDAIMIRTFEHETLEELAEYSTVPVINGLTDLSHPCQILADLLTI 143 (304)
T ss_pred HHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHhCCEEEEcCCChhHHHHHHHhCCCCEEeCCCCCCChHHHHHHHHHH
Confidence 35789999999964 3334443 4446677888887 34577776543 113445
Q ss_pred HhcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHhhCccccccceeeec-cccc--CcceE
Q 009674 346 VNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYAA--HKTKI 418 (529)
Q Consensus 346 ~~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~---~l~~~~~~~~~~~l~~~~-~~~~--~~~~v 418 (529)
.+.... +..+|.++|..+ .+.+..+..|.+-|.+|.+-..+.++ .+.+++..+.+.. +.++ ++++ ++++|
T Consensus 144 ~e~~g~l~gl~i~~vGd~~--~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~g~~-~~~~~d~~~a~~~aDv 220 (304)
T PRK00779 144 YEHRGSLKGLKVAWVGDGN--NVANSLLLAAALLGFDLRVATPKGYEPDPEIVEKIAKETGAS-IEVTHDPKEAVKGADV 220 (304)
T ss_pred HHHhCCcCCcEEEEEeCCC--ccHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHcCCe-EEEEcCHHHHhCCCCE
Confidence 444432 346899999965 89999999999999999994443332 1222111222333 3344 7764 88888
Q ss_pred EEEcCcCChhh---hhcCCCCceeecccccCcc---CCCCCce-eecCCcc
Q 009674 419 WLVGDDLTGKE---QARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM 462 (529)
Q Consensus 419 wivg~~~~~~~---q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a~ 462 (529)
+....|....+ |.... ..+-+| +++.+ ..|+|+. .|.+|+.
T Consensus 221 vy~~~w~~~~~~~~~~~~~--~~~~~y-~v~~~~l~~~~~~~ivmHplP~~ 268 (304)
T PRK00779 221 VYTDVWVSMGQEAEAEERL--KAFAPY-QVNEELMALAKPDAIFMHCLPAH 268 (304)
T ss_pred EEecCccccccchhHHHHH--HHhccc-CCCHHHHHhcCCCeEEecCCCcc
Confidence 88766554321 10000 012223 37766 4567766 4777743
No 341
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=90.02 E-value=1.5 Score=43.71 Aligned_cols=88 Identities=14% Similarity=0.125 Sum_probs=58.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccCcceEEE--EcCcCCh
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL--VGDDLTG 427 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwi--vg~~~~~ 427 (529)
....|++.|++| .+|.++++.+...|.++.. +++++.+.+++ ++... .+....++.....++++ +|....+
T Consensus 132 ~~~~vli~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~--~~~~~~~~~~~~~d~vl~~~g~~~~~ 206 (305)
T cd08270 132 LGRRVLVTGASG--GVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LGAAE--VVVGGSELSGAPVDLVVDSVGGPQLA 206 (305)
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcE--EEeccccccCCCceEEEECCCcHHHH
Confidence 367999999998 9999999999999999877 77888888865 44321 11111111113456666 4444445
Q ss_pred hhhhcCCCCceeecccc
Q 009674 428 KEQARAPKGTIFIPYTQ 444 (529)
Q Consensus 428 ~~q~~a~~G~~f~~~~~ 444 (529)
+-.+.++++-+++.+..
T Consensus 207 ~~~~~l~~~G~~v~~g~ 223 (305)
T cd08270 207 RALELLAPGGTVVSVGS 223 (305)
T ss_pred HHHHHhcCCCEEEEEec
Confidence 55567778888888763
No 342
>PRK06398 aldose dehydrogenase; Validated
Probab=89.99 E-value=0.34 Score=48.00 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=29.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 388 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~ 388 (529)
.+.|+++|++| -||+++|+.|+++|.+|++ |+++
T Consensus 6 gk~vlItGas~--gIG~~ia~~l~~~G~~Vi~~~r~~~ 41 (258)
T PRK06398 6 DKVAIVTGGSQ--GIGKAVVNRLKEEGSNVINFDIKEP 41 (258)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCcc
Confidence 36899999998 9999999999999999998 5543
No 343
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=89.98 E-value=0.42 Score=46.40 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=27.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
.+.|+++|++| .||+++|+.|+++|.++.+
T Consensus 6 ~~~vlitGasg--~iG~~l~~~l~~~g~~v~~ 35 (252)
T PRK06077 6 DKVVVVTGSGR--GIGRAIAVRLAKEGSLVVV 35 (252)
T ss_pred CcEEEEeCCCC--hHHHHHHHHHHHCCCEEEE
Confidence 36899999998 9999999999999999876
No 344
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.93 E-value=0.53 Score=48.93 Aligned_cols=138 Identities=18% Similarity=0.231 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ecc-------cccccccccCC---ceeeecC-CCCcce------------------
Q 009674 284 AINSLIEEAILEADAKGVKVIS--LGL-------LNQGEELNRNG---EIYLERQ-PNKLKI------------------ 332 (529)
Q Consensus 284 ~in~~I~~Ai~~A~k~G~kv~~--LG~-------ln~~e~ln~~g---~~~~~k~-p~~L~i------------------ 332 (529)
+-+.-++.-++.|++.|++..- |-. ++.+++||.|- |+.++.= |++++.
T Consensus 46 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~ 125 (284)
T PRK14177 46 ASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELLGVIDKLNLDPNVDGILLQHPVPSQIDERAAFDRIALEKDVDGVTT 125 (284)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccccCCh
Confidence 3344455566788888887655 322 22336677654 2444421 222331
Q ss_pred ----eeecCC----hhHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCc
Q 009674 333 ----KVVDGS----SLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 398 (529)
Q Consensus 333 ----rvv~Gn----sltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~ 398 (529)
|+..|+ .-|++.|++=+. -.-++|+++|.+. -||+-+|..|.++|-.|++ .++-
T Consensus 126 ~n~g~l~~g~~~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~atVt~chs~T---------- 193 (284)
T PRK14177 126 LSFGKLSMGVETYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSP--ILGKPMAMLLTEMNATVTLCHSKT---------- 193 (284)
T ss_pred hhHHHHHcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC----------
Confidence 222332 236666665443 3678999999998 9999999999999999999 2110
Q ss_pred cccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674 399 VEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 399 ~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 447 (529)
.++++ +++||+| +| +.++++.. ++|++++|+. +..
T Consensus 194 ----------~~l~~~~~~ADIvIsAvGk~~~i~~~~i---k~gavVIDvG-in~ 234 (284)
T PRK14177 194 ----------QNLPSIVRQADIIVGAVGKPEFIKADWI---SEGAVLLDAG-YNP 234 (284)
T ss_pred ----------CCHHHHHhhCCEEEEeCCCcCccCHHHc---CCCCEEEEec-Ccc
Confidence 12322 3566666 33 34777766 9999999998 554
No 345
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=89.86 E-value=0.52 Score=48.05 Aligned_cols=85 Identities=14% Similarity=0.199 Sum_probs=56.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--EcC----
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD---- 423 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~---- 423 (529)
.+|.++|. | .+|+++|+.|.+.|.+|.. |++++.+.+++. +. ....++++ ++++++| +-+
T Consensus 3 ~~IgviG~-G--~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-g~------~~~~~~~e~~~~~d~vi~~vp~~~~~ 72 (296)
T PRK11559 3 MKVGFIGL-G--IMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAA-GA------ETASTAKAVAEQCDVIITMLPNSPHV 72 (296)
T ss_pred ceEEEEcc-C--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CC------eecCCHHHHHhcCCEEEEeCCCHHHH
Confidence 36899996 5 9999999999999999988 788888777653 10 01224443 5566644 211
Q ss_pred --cCChhh--hhcCCCCceeecccccCcc
Q 009674 424 --DLTGKE--QARAPKGTIFIPYTQIPPR 448 (529)
Q Consensus 424 --~~~~~~--q~~a~~G~~f~~~~~~~~~ 448 (529)
.+..++ ...+++|+++++.|.++|.
T Consensus 73 ~~v~~~~~~~~~~~~~g~iiid~st~~~~ 101 (296)
T PRK11559 73 KEVALGENGIIEGAKPGTVVIDMSSIAPL 101 (296)
T ss_pred HHHHcCcchHhhcCCCCcEEEECCCCCHH
Confidence 111111 2346899999999998885
No 346
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=89.77 E-value=0.62 Score=48.03 Aligned_cols=30 Identities=17% Similarity=0.185 Sum_probs=27.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
.+.|+|+|++| -||+++++.|.++|.+|..
T Consensus 6 ~~~vlVTGatG--fiG~~l~~~L~~~G~~V~~ 35 (340)
T PLN02653 6 RKVALITGITG--QDGSYLTEFLLSKGYEVHG 35 (340)
T ss_pred CCEEEEECCCC--ccHHHHHHHHHHCCCEEEE
Confidence 35799999999 9999999999999999987
No 347
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=89.73 E-value=0.88 Score=48.83 Aligned_cols=151 Identities=15% Similarity=0.116 Sum_probs=102.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEE----EcCcC
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VGDDL 425 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg~~~ 425 (529)
.-+.|+|+|=- .+|+-||..|...|-+|.+..-|....||... .++ ++...++ ...+|.| .=|.|
T Consensus 208 aGK~vVV~GYG---~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~M-dGf-----~V~~m~~Aa~~gDifiT~TGnkdVi 278 (420)
T COG0499 208 AGKNVVVAGYG---WVGRGIAMRLRGMGARVIVTEVDPIRALEAAM-DGF-----RVMTMEEAAKTGDIFVTATGNKDVI 278 (420)
T ss_pred cCceEEEeccc---ccchHHHHHhhcCCCeEEEEecCchHHHHHhh-cCc-----EEEEhHHhhhcCCEEEEccCCcCcc
Confidence 45677777765 99999999999999999996666666665552 232 2555553 4557877 45789
Q ss_pred ChhhhhcCCCCceeecccccCcc--------------CCCCCceeecCCc---c--ccCCCCccccccccccCcchhHHH
Q 009674 426 TGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCFYHSTPA---M--IIPPSLSNMHSCENWLGRRVMSAW 486 (529)
Q Consensus 426 ~~~~q~~a~~G~~f~~~~~~~~~--------------~~R~dc~y~~~~a---~--~~P~~~~~~~~~e~~~p~r~~~Ac 486 (529)
+.|+.++|+.|++.|-.-.|+-+ +.|+.+.-.+.|. + .--+-+-|+. |--+.|..+|+..
T Consensus 279 ~~eh~~~MkDgaIl~N~GHFd~EI~~~~L~~~~~~~~~vr~~V~ey~l~~Gkri~llaeGRLvNLa-~a~GHPs~VMd~S 357 (420)
T COG0499 279 RKEHFEKMKDGAILANAGHFDVEIDVAGLEELAVEKREVRPQVDEYELPDGKRIILLAEGRLVNLA-AATGHPSEVMDMS 357 (420)
T ss_pred CHHHHHhccCCeEEecccccceeccHHHHHHhhhhHhccccCceEEEcCCCCEEEEEecceeeeec-cCCCCcHHHhhhh
Confidence 99999999999999877654322 2232222111111 1 1122366787 8899999999999
Q ss_pred HHhhHhhhhcCCCCC---ccch--hhhhHHH
Q 009674 487 RIAGIIHALEGWDLN---ECGQ--TMCDIHQ 512 (529)
Q Consensus 487 ~a~~~v~alEgw~~~---e~G~--iv~~id~ 512 (529)
+|--.+-+.|=|..+ |-|= +...+|+
T Consensus 358 FanQaLa~~~L~~n~~~~~~~Vy~lP~~lD~ 388 (420)
T COG0499 358 FANQALAQIYLVKNHGKLEPGVYRLPKELDE 388 (420)
T ss_pred HHHHHHHHHHHHhcccccCCceeeCcHHHHH
Confidence 999998888777766 4443 2355554
No 348
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=89.72 E-value=0.51 Score=50.57 Aligned_cols=139 Identities=14% Similarity=0.170 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEe--ccc-------ccccccccCC---ceeeecC-CCCcce-----------------
Q 009674 283 EAINSLIEEAILEADAKGVKVISL--GLL-------NQGEELNRNG---EIYLERQ-PNKLKI----------------- 332 (529)
Q Consensus 283 ~~in~~I~~Ai~~A~k~G~kv~~L--G~l-------n~~e~ln~~g---~~~~~k~-p~~L~i----------------- 332 (529)
.+-+.-+...++.|++.|++..-. -.- +.+++||.|- |+.++.= |++++.
T Consensus 115 paS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVDGl~ 194 (364)
T PLN02616 115 KDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDGFH 194 (364)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence 344555667778899999986543 222 2236778874 3555422 333431
Q ss_pred -----eeecC--C----hhHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHh
Q 009674 333 -----KVVDG--S----SLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKL 395 (529)
Q Consensus 333 -----rvv~G--n----sltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~ 395 (529)
|+..| + .-|++.|++-+. -.-++|+|+|... -||+-+|..|.++|-.|++ .++-
T Consensus 195 p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~--iVGkPLa~LL~~~~ATVTicHs~T------- 265 (364)
T PLN02616 195 PLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSN--IVGMPAALLLQREDATVSIVHSRT------- 265 (364)
T ss_pred hhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cccHHHHHHHHHCCCeEEEeCCCC-------
Confidence 23333 2 446777766553 3688999999997 9999999999999999999 2111
Q ss_pred hCccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674 396 RIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 396 ~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 447 (529)
.++++ +.+||+| +| .-++++.. ++|+++||+- +.+
T Consensus 266 -------------~nl~~~~r~ADIVIsAvGkp~~i~~d~v---K~GAvVIDVG-In~ 306 (364)
T PLN02616 266 -------------KNPEEITREADIIISAVGQPNMVRGSWI---KPGAVVIDVG-INP 306 (364)
T ss_pred -------------CCHHHHHhhCCEEEEcCCCcCcCCHHHc---CCCCEEEecc-ccc
Confidence 12332 3566766 33 34677766 9999999998 555
No 349
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.60 E-value=0.56 Score=49.05 Aligned_cols=139 Identities=19% Similarity=0.235 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 009674 283 EAINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLKI----------------- 332 (529)
Q Consensus 283 ~~in~~I~~Ai~~A~k~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------------- 332 (529)
.+-+.-+...++.|++.|++..-.= ++..++++|.|- ++.++.= |++++.
T Consensus 45 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~ 124 (297)
T PRK14168 45 PASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELLALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPDKDVDGFH 124 (297)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccC
Confidence 3445556667778888888875431 122236677774 2444421 222331
Q ss_pred -----eeecCC------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHH
Q 009674 333 -----KVVDGS------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYE 391 (529)
Q Consensus 333 -----rvv~Gn------sltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~l-~~~~~~~ 391 (529)
|+..|+ .-|++.|++=+ +-.-++|+|+|.+. -||+-+|..|.++ +-.|++ .++-
T Consensus 125 ~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~atVtv~hs~T--- 199 (297)
T PRK14168 125 PVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETSGAEVVVVGRSN--IVGKPIANMMTQKGPGANATVTIVHTRS--- 199 (297)
T ss_pred hhhHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cccHHHHHHHHhcccCCCCEEEEecCCC---
Confidence 333443 34666666544 44678999999997 9999999999988 788888 2111
Q ss_pred HHHhhCccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674 392 KLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 392 ~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 447 (529)
.++++ +++||+| +| ..++++.. ++|+++||+. ++.
T Consensus 200 -----------------~~l~~~~~~ADIvVsAvGkp~~i~~~~i---k~gavVIDvG-in~ 240 (297)
T PRK14168 200 -----------------KNLARHCQRADILIVAAGVPNLVKPEWI---KPGATVIDVG-VNR 240 (297)
T ss_pred -----------------cCHHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEecC-CCc
Confidence 12332 4566666 34 35777777 9999999998 554
No 350
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=89.58 E-value=0.26 Score=49.66 Aligned_cols=34 Identities=29% Similarity=0.295 Sum_probs=29.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 390 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~ 390 (529)
+|+++|++| -||+.+++.|.++|.+|.. |+.++.
T Consensus 2 ~vlItG~~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~ 37 (328)
T TIGR03466 2 KVLVTGATG--FVGSAVVRLLLEQGEEVRVLVRPTSDR 37 (328)
T ss_pred eEEEECCcc--chhHHHHHHHHHCCCEEEEEEecCccc
Confidence 689999999 9999999999999999988 655543
No 351
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.54 E-value=0.91 Score=47.28 Aligned_cols=138 Identities=17% Similarity=0.230 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeecC-CCCcce------------------
Q 009674 284 AINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------ 332 (529)
Q Consensus 284 ~in~~I~~Ai~~A~k~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------ 332 (529)
+-+.-+....+.|++.|++..-.= ++..+++||.|- |+.++.= |++++.
T Consensus 39 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p~KDVDGl~p 118 (287)
T PRK14181 39 ASEVYVGMKVKKATDLGMVSKAHRLPSDATLSDILKLIHRLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGLHP 118 (287)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCcCHHHHHhccCcccCcccCCh
Confidence 444556677778899998875442 344447777765 3444421 222321
Q ss_pred ----eeecCC-----hhHHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHHHH
Q 009674 333 ----KVVDGS-----SLAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEKL 393 (529)
Q Consensus 333 ----rvv~Gn-----sltaavv~~~-----i~~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~l-~~~~~~~~l 393 (529)
|+..|+ .-|+..|++= |+-.-++|+++|... -||+-+|..|.++ +-.|++ .++
T Consensus 119 ~n~g~l~~g~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~AtVtvchs~------ 190 (287)
T PRK14181 119 VNMGKLLLGETDGFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSN--IVGKPLAALLMQKHPDTNATVTLLHSQ------ 190 (287)
T ss_pred hhHHHHhcCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHhCcCCCCCEEEEeCCC------
Confidence 233343 2366666654 445688999999997 9999999999988 788888 111
Q ss_pred HhhCccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674 394 KLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 394 ~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 447 (529)
..++++ +.+||+| +| .-++++.. ++|++++|+. +.+
T Consensus 191 --------------T~~l~~~~~~ADIvV~AvG~p~~i~~~~i---k~GavVIDvG-in~ 232 (287)
T PRK14181 191 --------------SENLTEILKTADIIIAAIGVPLFIKEEMI---AEKAVIVDVG-TSR 232 (287)
T ss_pred --------------CCCHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence 112332 4666766 44 34677766 9999999998 554
No 352
>PLN00015 protochlorophyllide reductase
Probab=89.51 E-value=0.65 Score=47.55 Aligned_cols=40 Identities=18% Similarity=0.140 Sum_probs=35.1
Q ss_pred EEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCc
Q 009674 357 LLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 357 ~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~ 398 (529)
+++|+++ -||+++|+.|+++| .+|.+ |+.++.+++.+++.
T Consensus 1 lITGas~--GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~ 43 (308)
T PLN00015 1 IITGASS--GLGLATAKALAETGKWHVVMACRDFLKAERAAKSAG 43 (308)
T ss_pred CEeCCCC--hHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhc
Confidence 4789997 99999999999999 89888 88888888877764
No 353
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=89.47 E-value=0.37 Score=47.50 Aligned_cols=35 Identities=20% Similarity=0.309 Sum_probs=30.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 389 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~ 389 (529)
.+.|+++|++| -||+++|+.|.++|.+|.+ +++++
T Consensus 9 ~k~vlItG~s~--gIG~~la~~l~~~G~~v~~~~~~~~~ 45 (266)
T PRK06171 9 GKIIIVTGGSS--GIGLAIVKELLANGANVVNADIHGGD 45 (266)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 46799999998 9999999999999999998 54443
No 354
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=89.47 E-value=0.62 Score=48.77 Aligned_cols=138 Identities=17% Similarity=0.216 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcce------------------
Q 009674 284 AINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------ 332 (529)
Q Consensus 284 ~in~~I~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------ 332 (529)
+-+.-+...++.|++.|++. .-|. ++..+++||.|- |+.+..= |++++.
T Consensus 52 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvq~PlP~~id~~~i~~~I~p~KDVDGl~~ 131 (299)
T PLN02516 52 DSQTYVNMKRKACAEVGIKSFDVDLPENISEAELISKVHELNANPDVHGILVQLPLPKHINEEKILNEISLEKDVDGFHP 131 (299)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCcCHHHHHhccCcccccCccCH
Confidence 44444556677888888885 4443 223336677774 3544421 221221
Q ss_pred ----eeecC--C----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 009674 333 ----KVVDG--S----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 396 (529)
Q Consensus 333 ----rvv~G--n----sltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~ 396 (529)
|+..| + .-|++.|++=+ +-.-++|+++|.+. -||+-+|..|.++|-.|++ .++
T Consensus 132 ~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~--iVGkPla~lL~~~~ATVtvchs~--------- 200 (299)
T PLN02516 132 LNIGKLAMKGREPLFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSN--IVGLPVSLLLLKADATVTVVHSR--------- 200 (299)
T ss_pred hhHhhHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCC---------
Confidence 33333 1 34667766544 34678999999997 9999999999999999999 221
Q ss_pred Cccccccceeeeccccc--CcceEEE--EcC--cCChhhhhcCCCCceeecccccCc
Q 009674 397 IPVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 397 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 447 (529)
..++++ +++||+| +|+ .++++.. ++|++++|+. +..
T Consensus 201 -----------T~nl~~~~~~ADIvv~AvGk~~~i~~~~v---k~gavVIDvG-in~ 242 (299)
T PLN02516 201 -----------TPDPESIVREADIVIAAAGQAMMIKGDWI---KPGAAVIDVG-TNA 242 (299)
T ss_pred -----------CCCHHHHHhhCCEEEEcCCCcCccCHHHc---CCCCEEEEee-ccc
Confidence 112332 4566666 343 4555555 9999999998 554
No 355
>PRK07574 formate dehydrogenase; Provisional
Probab=89.36 E-value=0.61 Score=50.38 Aligned_cols=99 Identities=12% Similarity=0.220 Sum_probs=64.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH-HHHHhhCccccccceeeeccccc--CcceEEEE-------
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-EKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------- 421 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~-~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------- 421 (529)
..++|.++|.- .||+++|+.|...|.+|...++.+. ....++.+.. ...++++ ++++++++
T Consensus 191 ~gktVGIvG~G---~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~------~~~~l~ell~~aDvV~l~lPlt~~ 261 (385)
T PRK07574 191 EGMTVGIVGAG---RIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLT------YHVSFDSLVSVCDVVTIHCPLHPE 261 (385)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCce------ecCCHHHHhhcCCEEEEcCCCCHH
Confidence 45679999985 9999999999999999988222211 1111222111 1235554 67777552
Q ss_pred -cCcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCceeecC
Q 009674 422 -GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 459 (529)
Q Consensus 422 -g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 459 (529)
-..++.+....|++|+.||.++| ++.+ +++ -|++.++-
T Consensus 262 T~~li~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~i~GAaLDV~~~EP 315 (385)
T PRK07574 262 TEHLFDADVLSRMKRGSYLVNTARGKIVDRDAVVRALESGHLAGYAGDVWFPQP 315 (385)
T ss_pred HHHHhCHHHHhcCCCCcEEEECCCCchhhHHHHHHHHHhCCccEEEEecCCCCC
Confidence 23456788999999999999999 4433 444 57777664
No 356
>PRK13243 glyoxylate reductase; Reviewed
Probab=89.29 E-value=0.71 Score=48.65 Aligned_cols=97 Identities=8% Similarity=0.087 Sum_probs=64.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE------
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------ 421 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------ 421 (529)
..++|.++|- | .||+.+|+.|...|.+|.. |+.+... ..+.. +...++++ ++++++++
T Consensus 149 ~gktvgIiG~-G--~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~~~~-------~~~~~l~ell~~aDiV~l~lP~t~ 216 (333)
T PRK13243 149 YGKTIGIIGF-G--RIGQAVARRAKGFGMRILYYSRTRKPEA--EKELG-------AEYRPLEELLRESDFVSLHVPLTK 216 (333)
T ss_pred CCCEEEEECc-C--HHHHHHHHHHHHCCCEEEEECCCCChhh--HHHcC-------CEecCHHHHHhhCCEEEEeCCCCh
Confidence 4678999998 5 9999999999999999988 3332211 11111 11224554 56666552
Q ss_pred --cCcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCceeecCC
Q 009674 422 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHSTP 460 (529)
Q Consensus 422 --g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~~ 460 (529)
-..++.+....|++|++++.++| ++.+ +++ -|++..+-+
T Consensus 217 ~T~~~i~~~~~~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gAaLDV~~~EP~ 272 (333)
T PRK13243 217 ETYHMINEERLKLMKPTAILVNTARGKVVDTKALVKALKEGWIAGAGLDVFEEEPY 272 (333)
T ss_pred HHhhccCHHHHhcCCCCeEEEECcCchhcCHHHHHHHHHcCCeEEEEeccCCCCCC
Confidence 23456688899999999999999 4443 222 488877643
No 357
>PLN02928 oxidoreductase family protein
Probab=89.18 E-value=0.89 Score=48.28 Aligned_cols=94 Identities=14% Similarity=0.128 Sum_probs=59.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccce----eeeccccc--CcceEEEE--
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNL----VLSTSYAA--HKTKIWLV-- 421 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l----~~~~~~~~--~~~~vwiv-- 421 (529)
..++|.++|.- .||+++|+.|...|.+|+. |+.++-..-...++.+.-..+ ....++++ +.+|++++
T Consensus 158 ~gktvGIiG~G---~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 158 FGKTVFILGYG---AIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCEEEEECCC---HHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 35789999985 9999999999999999988 332211100000000000000 01225554 67777663
Q ss_pred ------cCcCChhhhhcCCCCceeecccc---cCcc
Q 009674 422 ------GDDLTGKEQARAPKGTIFIPYTQ---IPPR 448 (529)
Q Consensus 422 ------g~~~~~~~q~~a~~G~~f~~~~~---~~~~ 448 (529)
-..|+.++..+||+|+++|.++| |+.+
T Consensus 235 Plt~~T~~li~~~~l~~Mk~ga~lINvaRG~lVde~ 270 (347)
T PLN02928 235 TLTKETAGIVNDEFLSSMKKGALLVNIARGGLLDYD 270 (347)
T ss_pred CCChHhhcccCHHHHhcCCCCeEEEECCCccccCHH
Confidence 34677889999999999999999 5544
No 358
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=89.13 E-value=0.45 Score=50.33 Aligned_cols=31 Identities=16% Similarity=0.195 Sum_probs=29.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
..++|+|+|+|| -||+++|+.|.++|.+|+.
T Consensus 20 ~~~~IlVtGgtG--fIG~~l~~~L~~~G~~V~~ 50 (370)
T PLN02695 20 EKLRICITGAGG--FIASHIARRLKAEGHYIIA 50 (370)
T ss_pred CCCEEEEECCcc--HHHHHHHHHHHhCCCEEEE
Confidence 577899999999 9999999999999999987
No 359
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=89.00 E-value=0.46 Score=49.13 Aligned_cols=29 Identities=10% Similarity=0.184 Sum_probs=25.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
++|+|+|+|| -||+++++.|+++|.+++.
T Consensus 2 ~~vlVtGatG--fIG~~l~~~L~~~g~~~v~ 30 (355)
T PRK10217 2 RKILITGGAG--FIGSALVRYIINETSDAVV 30 (355)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHHcCCCEEE
Confidence 4799999999 9999999999999977543
No 360
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=88.91 E-value=0.68 Score=48.56 Aligned_cols=121 Identities=17% Similarity=0.212 Sum_probs=82.8
Q ss_pred cceeeecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee
Q 009674 330 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL 407 (529)
Q Consensus 330 L~irvv~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~ 407 (529)
.+-|++.+.+. ....+++...++|=++|=- -.|++.|.-|-+.|.+|++ |++++.++|++.=.+-. .
T Consensus 15 ~~~~~~~~~~~---~~s~~~~~s~~~iGFIGLG---~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~-----~ 83 (327)
T KOG0409|consen 15 FSRRLVKASET---AMSSRITPSKTRIGFIGLG---NMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVA-----N 83 (327)
T ss_pred hcccccccccc---cccccCCcccceeeEEeec---cchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhh-----C
Confidence 44566666666 5566676677788888754 7899999999999999999 99999999987722211 1
Q ss_pred ec-ccccCcceE--EEEcCcCChhhhhc--------CCCCcee-ecccccCcc-------CCC-CCceeecCCcc
Q 009674 408 ST-SYAAHKTKI--WLVGDDLTGKEQAR--------APKGTIF-IPYTQIPPR-------KLR-KDCFYHSTPAM 462 (529)
Q Consensus 408 ~~-~~~~~~~~v--wivg~~~~~~~q~~--------a~~G~~f-~~~~~~~~~-------~~R-~dc~y~~~~a~ 462 (529)
.. ++. +++|+ -+|++....+|..- .++|-.. +|-|-++|. +.+ ++|.|.+.|+-
T Consensus 84 sPaeVa-e~sDvvitmv~~~~~v~~v~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~~~~vDAPVS 157 (327)
T KOG0409|consen 84 SPAEVA-EDSDVVITMVPNPKDVKDVLLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKGGRFVDAPVS 157 (327)
T ss_pred CHHHHH-hhcCEEEEEcCChHhhHHHhcCCCcceeeccCCCceEEeccccCHHHHHHHHHHHHhCCCeEEecccc
Confidence 11 222 34444 44666666665433 2344444 888888887 233 99999999974
No 361
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=88.86 E-value=0.68 Score=48.89 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=72.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--cccc--CcceEEE------
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYAA--HKTKIWL------ 420 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~--~~~~--~~~~vwi------ 420 (529)
.++|.+.|.- -+|.--|+...--|-+|++ +|-+|+..|...-... .....++ ++++ ..+|++|
T Consensus 168 ~~kv~iiGGG---vvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~r--v~~~~st~~~iee~v~~aDlvIgaVLIp 242 (371)
T COG0686 168 PAKVVVLGGG---VVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGR--VHTLYSTPSNIEEAVKKADLVIGAVLIP 242 (371)
T ss_pred CccEEEECCc---cccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCce--eEEEEcCHHHHHHHhhhccEEEEEEEec
Confidence 4578888876 7899999999999999999 8999999887773332 1112344 5554 4445544
Q ss_pred ---EcCcCChhhhhcCCCCceeecccccCcc----CCC----CCceeecCCc
Q 009674 421 ---VGDDLTGKEQARAPKGTIFIPYTQIPPR----KLR----KDCFYHSTPA 461 (529)
Q Consensus 421 ---vg~~~~~~~q~~a~~G~~f~~~~~~~~~----~~R----~dc~y~~~~a 461 (529)
.=+-++.|.+++|+||++.+|++ +|.- ..| +|=+|.+-+.
T Consensus 243 gakaPkLvt~e~vk~MkpGsVivDVA-iDqGGc~Et~~~TTh~~PtY~~~gv 293 (371)
T COG0686 243 GAKAPKLVTREMVKQMKPGSVIVDVA-IDQGGCFETSHPTTHDDPTYEVDGV 293 (371)
T ss_pred CCCCceehhHHHHHhcCCCcEEEEEE-EcCCCceeccccccCCCCceeecCE
Confidence 22456778899999999999999 7665 223 5555655554
No 362
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=88.83 E-value=0.65 Score=51.78 Aligned_cols=92 Identities=14% Similarity=0.169 Sum_probs=57.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc--------ccc--------ccceeeec-cccc-
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP--------VEA--------QHNLVLST-SYAA- 413 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~--------~~~--------~~~l~~~~-~~~~- 413 (529)
++|.|+|+- .+|+.||..|++.|.+|++ ++++.+++..+++. .+. ....+..+ ++++
T Consensus 6 ~kV~VIGaG---~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~~l 82 (503)
T TIGR02279 6 VTVAVIGAG---AMGAGIAQVAASAGHQVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVTDLHAL 82 (503)
T ss_pred cEEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeCCHHHh
Confidence 469999994 9999999999999999999 88888775432211 110 01112233 7766
Q ss_pred CcceEEE--EcCcCChhhh------hcCCCCceee-cccccCcc
Q 009674 414 HKTKIWL--VGDDLTGKEQ------ARAPKGTIFI-PYTQIPPR 448 (529)
Q Consensus 414 ~~~~vwi--vg~~~~~~~q------~~a~~G~~f~-~~~~~~~~ 448 (529)
++++++| |-+.++-++. ..+|++++++ .-|-+++.
T Consensus 83 ~~aDlVIEav~E~~~vK~~vf~~l~~~~~~~~IlasnTStl~i~ 126 (503)
T TIGR02279 83 ADAGLVIEAIVENLEVKKALFAQLEELCPADTIIASNTSSLSIT 126 (503)
T ss_pred CCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHH
Confidence 7887766 3222222221 2468888876 45545544
No 363
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=88.83 E-value=0.65 Score=49.47 Aligned_cols=82 Identities=17% Similarity=0.159 Sum_probs=59.1
Q ss_pred hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 009674 340 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 413 (529)
Q Consensus 340 ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 413 (529)
-|++.|++=+ +-.-++|+|+|... -||+-+|..|.++|-.|++ .++- .++++
T Consensus 196 CTp~avi~LL~~~~i~l~GK~vvVIGRS~--iVGkPla~LL~~~~ATVTicHs~T--------------------~nl~~ 253 (345)
T PLN02897 196 CTPKGCVELLIRSGVEIAGKNAVVIGRSN--IVGLPMSLLLQRHDATVSTVHAFT--------------------KDPEQ 253 (345)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCc--cccHHHHHHHHHCCCEEEEEcCCC--------------------CCHHH
Confidence 4666666544 44688999999997 9999999999999999999 2111 12222
Q ss_pred --CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674 414 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 414 --~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 447 (529)
+++||+| +| ..++++.. ++|+++||+. +.+
T Consensus 254 ~~~~ADIvIsAvGkp~~v~~d~v---k~GavVIDVG-in~ 289 (345)
T PLN02897 254 ITRKADIVIAAAGIPNLVRGSWL---KPGAVVIDVG-TTP 289 (345)
T ss_pred HHhhCCEEEEccCCcCccCHHHc---CCCCEEEEcc-ccc
Confidence 3566766 33 34677766 9999999998 655
No 364
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=88.81 E-value=0.65 Score=53.47 Aligned_cols=45 Identities=16% Similarity=0.207 Sum_probs=38.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
..+.|+|+|++| -||+++|+.|+++|.+|.+ |+.++.+++++++.
T Consensus 413 ~gkvvLVTGasg--gIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~ 459 (676)
T TIGR02632 413 ARRVAFVTGGAG--GIGRETARRLAAEGAHVVLADLNLEAAEAVAAEIN 459 (676)
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHH
Confidence 356899999998 9999999999999999988 88888877776644
No 365
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=88.75 E-value=0.94 Score=45.21 Aligned_cols=114 Identities=13% Similarity=0.149 Sum_probs=64.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcE---EEe--cc----hhhH---HHHHhhCccccccceeeecccc-c-Ccce
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIK---VAT--IC----KDDY---EKLKLRIPVEAQHNLVLSTSYA-A-HKTK 417 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~---v~l--~~----~~~~---~~l~~~~~~~~~~~l~~~~~~~-~-~~~~ 417 (529)
...+|++.||- ..|++||..|.+.|++ +.+ |+ ++|- ...|+++.++....-.. .++. + .+++
T Consensus 24 ~~~rvlvlGAG---gAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~~~-~~l~~~l~~~d 99 (226)
T cd05311 24 EEVKIVINGAG---AAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEKTG-GTLKEALKGAD 99 (226)
T ss_pred cCCEEEEECch---HHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCccc-CCHHHHHhcCC
Confidence 46799999995 8999999999999985 767 55 3442 22222221111100011 1443 3 5677
Q ss_pred EEEE---cCcCChhhhhcCCCCceeecccccCcc-----CC-CCCc-eeecCCccccCCCCccc
Q 009674 418 IWLV---GDDLTGKEQARAPKGTIFIPYTQIPPR-----KL-RKDC-FYHSTPAMIIPPSLSNM 471 (529)
Q Consensus 418 vwiv---g~~~~~~~q~~a~~G~~f~~~~~~~~~-----~~-R~dc-~y~~~~a~~~P~~~~~~ 471 (529)
++|- .-.++++..+.|.++.++.|.+ -|.. +. +..| ++.++..| +|.--+|+
T Consensus 100 vlIgaT~~G~~~~~~l~~m~~~~ivf~ls-nP~~e~~~~~A~~~ga~i~a~G~~~-~~~Q~nn~ 161 (226)
T cd05311 100 VFIGVSRPGVVKKEMIKKMAKDPIVFALA-NPVPEIWPEEAKEAGADIVATGRSD-FPNQVNNV 161 (226)
T ss_pred EEEeCCCCCCCCHHHHHhhCCCCEEEEeC-CCCCcCCHHHHHHcCCcEEEeCCCC-Ccccccee
Confidence 7662 2236678887777777666887 3322 12 2467 46666444 44444444
No 366
>PRK08309 short chain dehydrogenase; Provisional
Probab=88.58 E-value=0.63 Score=44.73 Aligned_cols=41 Identities=24% Similarity=0.344 Sum_probs=33.7
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
.|+++|+|| -+ .++++.|+++|.+|.+ |++++.+.++.+++
T Consensus 2 ~vlVtGGtG--~g-g~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~ 44 (177)
T PRK08309 2 HALVIGGTG--ML-KRVSLWLCEKGFHVSVIARREVKLENVKREST 44 (177)
T ss_pred EEEEECcCH--HH-HHHHHHHHHCcCEEEEEECCHHHHHHHHHHhh
Confidence 589999986 55 5599999999999988 88888888876554
No 367
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional
Probab=88.55 E-value=2.1 Score=45.42 Aligned_cols=164 Identities=18% Similarity=0.210 Sum_probs=101.7
Q ss_pred HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 009674 296 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 346 (529)
Q Consensus 296 A~k~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~ 346 (529)
+.++|.+++.|+.= .++|. |.+..-..+.|+|+ ..+++|+.+-| +=+.++.
T Consensus 67 ~~~LGg~~i~l~~~~s~~~kgEsl~Dtarvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~ 146 (334)
T PRK12562 67 AYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGHGQEVVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQ 146 (334)
T ss_pred HHHcCCeEEEeCCccccCCCCcCHHHHHHHHHHhCCEEEEECCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 46799999999643 33343 45566677888876 35688888754 1245666
Q ss_pred hcCc---CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHh---hCccccccceeeec-cccc--C
Q 009674 347 NSLP---KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKL---RIPVEAQHNLVLST-SYAA--H 414 (529)
Q Consensus 347 ~~i~---~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~---~l~~---~~~~~~~~~l~~~~-~~~~--~ 414 (529)
+... -+..+|+++|... +.+++..+..+++-|.++.+-..+.|+ ++.+ +...+.+.+ +.++ ++++ +
T Consensus 147 e~~g~~~l~gl~va~vGD~~-~~v~~S~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~-~~~~~d~~~a~~ 224 (334)
T PRK12562 147 EHLPGKAFNEMTLVYAGDAR-NNMGNSMLEAAALTGLDLRLVAPQACWPEASLVAECSALAQKHGGK-ITLTEDIAAGVK 224 (334)
T ss_pred HHhCCCCcCCcEEEEECCCC-CCHHHHHHHHHHHcCCEEEEECCcccCCcHHHHHHHHHHHHHcCCe-EEEEcCHHHHhC
Confidence 6553 2357999999863 468999999888999999983333321 1111 112222333 3344 7764 8
Q ss_pred cceEEEEcCcCChhhhhc--CCCCceeecccccCcc--CC--CCCcee-ecCCcc
Q 009674 415 KTKIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR--KL--RKDCFY-HSTPAM 462 (529)
Q Consensus 415 ~~~vwivg~~~~~~~q~~--a~~G~~f~~~~~~~~~--~~--R~dc~y-~~~~a~ 462 (529)
+++|+..+.|.+..+|.. ...-..|-+| |++++ +. |+||.+ |.+|+.
T Consensus 225 ~aDvvyt~~w~sm~~~~~~~~~~~~~~~~y-~v~~ell~~a~~~~~i~mHcLP~~ 278 (334)
T PRK12562 225 GADFIYTDVWVSMGEPKEKWAERIALLRGY-QVNSKMMALTGNPQVKFLHCLPAF 278 (334)
T ss_pred CCCEEEEcCccccccchhhHHHHHHhccCC-cCCHHHHHhhcCCCCEEECCCCCC
Confidence 889888877765443311 0111245566 48888 32 688875 788873
No 368
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=88.54 E-value=1.8 Score=45.28 Aligned_cols=101 Identities=14% Similarity=0.113 Sum_probs=61.7
Q ss_pred ChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec---c
Q 009674 338 SSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST---S 410 (529)
Q Consensus 338 nsltaavv~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~---~ 410 (529)
+.+||+..+... .+....|++.|++| -||.++++.+...|.+|.. +++++.+.++++++.+. .+... +
T Consensus 142 ~~~TA~~al~~~~~~~~g~~VlV~GaaG--~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~---vi~~~~~~~ 216 (348)
T PLN03154 142 AGFTAYAGFYEVCSPKKGDSVFVSAASG--AVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE---AFNYKEEPD 216 (348)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCE---EEECCCccc
Confidence 445555555332 23457899999998 9999999988899999876 77888888876555422 11111 1
Q ss_pred cc----c---CcceEEE--EcCcCChhhhhcCCCCceeeccc
Q 009674 411 YA----A---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT 443 (529)
Q Consensus 411 ~~----~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~ 443 (529)
+. + ...++++ +|.....+-...+.+|-.++-+.
T Consensus 217 ~~~~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G 258 (348)
T PLN03154 217 LDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCG 258 (348)
T ss_pred HHHHHHHHCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEEC
Confidence 11 1 1345555 44333334444566666666665
No 369
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=88.50 E-value=0.65 Score=47.47 Aligned_cols=28 Identities=25% Similarity=0.300 Sum_probs=26.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
+|+|+|+|| -||+++|+.|.++|.+|++
T Consensus 2 ~vlVtGatG--~iG~~l~~~L~~~g~~V~~ 29 (338)
T PRK10675 2 RVLVTGGSG--YIGSHTCVQLLQNGHDVVI 29 (338)
T ss_pred eEEEECCCC--hHHHHHHHHHHHCCCeEEE
Confidence 589999999 9999999999999999987
No 370
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=88.45 E-value=4.9 Score=42.76 Aligned_cols=162 Identities=20% Similarity=0.217 Sum_probs=95.4
Q ss_pred HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCChh---------HHHHHH
Q 009674 296 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSSL---------AAAVVV 346 (529)
Q Consensus 296 A~k~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gnsl---------taavv~ 346 (529)
+.++|.+++.|+.= +++|. |+...-+.+.|++. ..+++|+.|.+= =..++.
T Consensus 64 ~~~LGg~~i~l~~~~ss~~kgEsl~Dtarvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~ 143 (338)
T PRK02255 64 MTQLGGHAQYLAPGQIQLGGHESLEDTARVLSRLVDIIMARVDRHQTVVELAKYATVPVINGMSDYNHPTQELGDLFTMI 143 (338)
T ss_pred HHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHhCcEEEEecCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 46799999999643 23333 34444466666654 345788877652 245666
Q ss_pred hcCc----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH-------HHHHhhCccccccceeeec-cccc-
Q 009674 347 NSLP----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-------EKLKLRIPVEAQHNLVLST-SYAA- 413 (529)
Q Consensus 347 ~~i~----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~-------~~l~~~~~~~~~~~l~~~~-~~~~- 413 (529)
+..+ -+..+|.++|..+ .+.+..+..|++-|.+|.+-..+.| +.+++.+ ..++.. +.++ ++++
T Consensus 144 e~~g~g~~l~glkv~~vGD~~--~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~-~~~g~~-~~~~~d~~ea 219 (338)
T PRK02255 144 EHLPEGKKLEDCKVVFVGDAT--QVCVSLMFIATKMGMDFVHFGPKGYQLPEEHLAIAEENC-EVSGGS-VLVTDDVDEA 219 (338)
T ss_pred HHhCCCCCCCCCEEEEECCCc--hHHHHHHHHHHhCCCEEEEECCCccccCHHHHHHHHHHH-HhcCCe-EEEEcCHHHH
Confidence 6653 2356999999975 8999999999999999999333322 2222221 122233 3344 7764
Q ss_pred -CcceEEEEcCcCChhhhhcCC-C-Cceeec-ccccCcc---CCCCCce-eecCCcc
Q 009674 414 -HKTKIWLVGDDLTGKEQARAP-K-GTIFIP-YTQIPPR---KLRKDCF-YHSTPAM 462 (529)
Q Consensus 414 -~~~~vwivg~~~~~~~q~~a~-~-G~~f~~-~~~~~~~---~~R~dc~-y~~~~a~ 462 (529)
++++|+..+-|.+...|...+ + =..|.| | |++.+ ..++||. .|.+|+-
T Consensus 220 v~~aDvvy~~~w~~~~~~~~~~~~r~~~~~~~y-~v~~ell~~a~~~~ivmHpLP~~ 275 (338)
T PRK02255 220 VKDADFVYTDVWYGLYDAELSEEERMAIFYPKY-QVTPELMAKAGPHAKFMHCLPAT 275 (338)
T ss_pred hCCCCEEEEcccHhhccchhhHHHHHHhhCCCc-eECHHHHhccCCCCEEeCCCCCc
Confidence 788887775555211110000 0 012233 4 48877 5568887 4888863
No 371
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=88.41 E-value=0.73 Score=47.06 Aligned_cols=40 Identities=25% Similarity=0.307 Sum_probs=34.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 396 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 396 (529)
++|.++|+. .+|+++|..|++.|.+|++ ++++.+++.++.
T Consensus 4 ~kIaViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~ 45 (287)
T PRK08293 4 KNVTVAGAG---VLGSQIAFQTAFHGFDVTIYDISDEALEKAKER 45 (287)
T ss_pred cEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence 579999985 9999999999999999999 788877776654
No 372
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=88.33 E-value=0.8 Score=44.99 Aligned_cols=40 Identities=15% Similarity=0.179 Sum_probs=35.7
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 396 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 396 (529)
+|.++|++| .+|+++|+.|++.|.+|.+ |++++.++++++
T Consensus 2 kI~IIGG~G--~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 2 KIAVLGGTG--DQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred EEEEEcCCC--HHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 588999888 9999999999999999888 888888888765
No 373
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=88.32 E-value=1 Score=47.41 Aligned_cols=86 Identities=10% Similarity=0.063 Sum_probs=53.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc-------------cccccceeeeccccc--C
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEAQHNLVLSTSYAA--H 414 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~-------------~~~~~~l~~~~~~~~--~ 414 (529)
+-++|.|+|+- -+|+.+|..+++.|.+|++ ++.+..+.+++.+. ......+-..+++++ +
T Consensus 6 ~i~~VaVIGaG---~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~ 82 (321)
T PRK07066 6 DIKTFAAIGSG---VIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVA 82 (321)
T ss_pred CCCEEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhc
Confidence 44689999985 8999999999999999999 66666555443221 111122123347764 7
Q ss_pred cceEEE--EcCcCChhh------hhcCCCCceee
Q 009674 415 KTKIWL--VGDDLTGKE------QARAPKGTIFI 440 (529)
Q Consensus 415 ~~~vwi--vg~~~~~~~------q~~a~~G~~f~ 440 (529)
+++++| |-+.++-+. ...+|+++++.
T Consensus 83 ~aDlViEavpE~l~vK~~lf~~l~~~~~~~aIla 116 (321)
T PRK07066 83 DADFIQESAPEREALKLELHERISRAAKPDAIIA 116 (321)
T ss_pred CCCEEEECCcCCHHHHHHHHHHHHHhCCCCeEEE
Confidence 887766 222222111 13579998665
No 374
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=88.26 E-value=1.3 Score=37.09 Aligned_cols=30 Identities=27% Similarity=0.361 Sum_probs=25.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT 384 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l 384 (529)
..+++.++|+ | .+|+.++++|++. +.++.+
T Consensus 22 ~~~~v~i~G~-G--~~g~~~a~~l~~~~~~~v~v 52 (86)
T cd05191 22 KGKTVVVLGA-G--EVGKGIAKLLADEGGKKVVL 52 (86)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEE
Confidence 4678999999 7 9999999999987 667777
No 375
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=88.00 E-value=0.7 Score=50.86 Aligned_cols=66 Identities=17% Similarity=0.186 Sum_probs=45.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhcc-------Cc--EEEe--cchhhHHHHHhhCccccc---cceeeec--cccc-Cc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQM-------GI--KVAT--ICKDDYEKLKLRIPVEAQ---HNLVLST--SYAA-HK 415 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~-------~~--~v~l--~~~~~~~~l~~~~~~~~~---~~l~~~~--~~~~-~~ 415 (529)
.-+|.++||+| .||+++|..|+.+ ++ ++.+ +++++.+-...++..... .+ +.++ +|++ ++
T Consensus 100 ~~KV~IIGAaG--~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~-v~i~~~~ye~~kd 176 (444)
T PLN00112 100 LINVAVSGAAG--MISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLRE-VSIGIDPYEVFQD 176 (444)
T ss_pred CeEEEEECCCc--HHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCc-eEEecCCHHHhCc
Confidence 45899999998 9999999999977 66 4555 788877755555433220 12 3333 7776 88
Q ss_pred ceEEEE
Q 009674 416 TKIWLV 421 (529)
Q Consensus 416 ~~vwiv 421 (529)
++|+|+
T Consensus 177 aDiVVi 182 (444)
T PLN00112 177 AEWALL 182 (444)
T ss_pred CCEEEE
Confidence 887663
No 376
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=87.90 E-value=6.5 Score=41.76 Aligned_cols=163 Identities=18% Similarity=0.152 Sum_probs=96.7
Q ss_pred HHHcCCcEEEeccc----cccccc-------ccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 009674 296 ADAKGVKVISLGLL----NQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 346 (529)
Q Consensus 296 A~k~G~kv~~LG~l----n~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~ 346 (529)
+.++|.+++-|+.= .++|.+ .+..-..+.|+|+ ..+++|+.+-+ +=+.++.
T Consensus 68 ~~~LGg~~i~l~~~~ss~~kgEsl~Dt~rvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~ 147 (331)
T PRK02102 68 AIDLGAHVTYLGPNDSQLGKKESIEDTARVLGRMYDGIEYRGFKQEIVEELAKYSGVPVWNGLTDEWHPTQMLADFMTMK 147 (331)
T ss_pred HHHcCCCEEEcCcccccCCCCcCHHHHHHHHhhcCCEEEEECCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 45899999998753 344554 5566677888887 24677877644 1234555
Q ss_pred hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHH---HH---hhCccccccceeeec-cccc--Ccc
Q 009674 347 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEK---LK---LRIPVEAQHNLVLST-SYAA--HKT 416 (529)
Q Consensus 347 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~---l~---~~~~~~~~~~l~~~~-~~~~--~~~ 416 (529)
+.... +..+|+++|... +.+.+..+..|++-|.+|.+-.++.|+. +. ++.....+.. +.++ ++++ +++
T Consensus 148 e~~g~l~g~~va~vGd~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~-~~~~~d~~ea~~~a 225 (331)
T PRK02102 148 EHFGPLKGLKLAYVGDGR-NNMANSLMVGGAKLGMDVRICAPKELWPEEELVALAREIAKETGAK-ITITEDPEEAVKGA 225 (331)
T ss_pred HHhCCCCCCEEEEECCCc-ccHHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHHHHHHHcCCe-EEEEcCHHHHhCCC
Confidence 54432 457999999973 3689999999999999998833333321 11 1111222333 3344 7764 788
Q ss_pred eEEEEcCcCChhhhh-cCCCCceeecccccCcc--C--CCCCce-eecCCc
Q 009674 417 KIWLVGDDLTGKEQA-RAPKGTIFIPYTQIPPR--K--LRKDCF-YHSTPA 461 (529)
Q Consensus 417 ~vwivg~~~~~~~q~-~a~~G~~f~~~~~~~~~--~--~R~dc~-y~~~~a 461 (529)
+|+..+.|.+-.+.. +...-..+-+| |++.+ + .++||. .|.+|+
T Consensus 226 Dvvyt~~w~~~~~~~~~~~~~~~~~~y-~vt~ell~~~~~~d~ivmH~lP~ 275 (331)
T PRK02102 226 DVIYTDVWVSMGEEDEWEERIKLLKPY-QVNMDLMKATGNPDVIFMHCLPA 275 (331)
T ss_pred CEEEEcCcccCccccchHHHHHhccCC-cCCHHHHhhhcCCCCEEECCCCC
Confidence 887776554311100 00011223445 38887 4 368887 477776
No 377
>PLN02240 UDP-glucose 4-epimerase
Probab=87.74 E-value=0.89 Score=46.77 Aligned_cols=29 Identities=21% Similarity=0.288 Sum_probs=27.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
++|+++|+|| -||+++++.|.++|.+|+.
T Consensus 6 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~ 34 (352)
T PLN02240 6 RTILVTGGAG--YIGSHTVLQLLLAGYKVVV 34 (352)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEE
Confidence 5799999999 9999999999999999987
No 378
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=87.66 E-value=0.92 Score=46.76 Aligned_cols=102 Identities=13% Similarity=0.080 Sum_probs=64.2
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--EcCc-CCh
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD-LTG 427 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~-~~~ 427 (529)
+|.++|. | .+|.++|+.|.+.|.+|.+ |++++.+.++++-.... . ...++.+ +++++++ +-+. +++
T Consensus 2 ~Ig~IGl-G--~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~-~---s~~~~~~~~~~~dvIi~~vp~~~~~~ 74 (298)
T TIGR00872 2 QLGLIGL-G--RMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGV-A---NLRELSQRLSAPRVVWVMVPHGIVDA 74 (298)
T ss_pred EEEEEcc-h--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCccc-C---CHHHHHhhcCCCCEEEEEcCchHHHH
Confidence 5889996 5 9999999999999999998 89999998887521111 0 0112221 3455543 2111 111
Q ss_pred --hh-hhcCCCCceeecccccCccCC--------CCCceeecCCccc
Q 009674 428 --KE-QARAPKGTIFIPYTQIPPRKL--------RKDCFYHSTPAMI 463 (529)
Q Consensus 428 --~~-q~~a~~G~~f~~~~~~~~~~~--------R~dc~y~~~~a~~ 463 (529)
++ ....++|.++++.+-.+|... ++.+.|.+.|.+-
T Consensus 75 v~~~l~~~l~~g~ivid~st~~~~~t~~~~~~~~~~g~~~vda~vsG 121 (298)
T TIGR00872 75 VLEELAPTLEKGDIVIDGGNSYYKDSLRRYKLLKEKGIHLLDCGTSG 121 (298)
T ss_pred HHHHHHhhCCCCCEEEECCCCCcccHHHHHHHHHhcCCeEEecCCCC
Confidence 12 223578999999987665511 1456688877654
No 379
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=87.63 E-value=0.97 Score=48.73 Aligned_cols=45 Identities=18% Similarity=0.303 Sum_probs=37.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c--chhhHHHHHhhCc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I--CKDDYEKLKLRIP 398 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~--~~~~~~~l~~~~~ 398 (529)
..+.|+++|++| -||+++|++|+++|.+|++ + +.++++++.++++
T Consensus 209 ~g~~vlItGasg--gIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~ 257 (450)
T PRK08261 209 AGKVALVTGAAR--GIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG 257 (450)
T ss_pred CCCEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC
Confidence 457899999998 9999999999999999998 3 3466777766654
No 380
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=87.58 E-value=0.48 Score=49.26 Aligned_cols=101 Identities=21% Similarity=0.207 Sum_probs=67.3
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh-HHHHHhhCccccccceeeecccc-c-CcceEEE--------E
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD-YEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--------V 421 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~-~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwi--------v 421 (529)
+|.++|-- ..|...|.-|-+.|.+|.+ |++++ .+.++++ +... ..+.. + +.++++| |
T Consensus 2 kIafIGLG---~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~-Ga~~------a~s~~eaa~~aDvVitmv~~~~~V 71 (286)
T COG2084 2 KIAFIGLG---IMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAA-GATV------AASPAEAAAEADVVITMLPDDAAV 71 (286)
T ss_pred eEEEEcCc---hhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHc-CCcc------cCCHHHHHHhCCEEEEecCCHHHH
Confidence 57888865 8999999999999999999 88787 5555553 2221 11122 2 4455544 3
Q ss_pred cCcCCh--hhhhcCCCCceeecccccCccCCC--------CCceeecCCccccC
Q 009674 422 GDDLTG--KEQARAPKGTIFIPYTQIPPRKLR--------KDCFYHSTPAMIIP 465 (529)
Q Consensus 422 g~~~~~--~~q~~a~~G~~f~~~~~~~~~~~R--------~dc~y~~~~a~~~P 465 (529)
.+.+.. .=...++||++|||.|-++|...| +-+.|.+-|++--+
T Consensus 72 ~~V~~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~~lDAPVsGg~ 125 (286)
T COG2084 72 RAVLFGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLEFLDAPVSGGV 125 (286)
T ss_pred HHHHhCccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCcEEecCccCCc
Confidence 333332 123357899999999999998221 66778888886533
No 381
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=87.48 E-value=0.72 Score=45.06 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=30.0
Q ss_pred cccCchhhHHHHHHHHhccCcEEEe--cchhh----HHHHHhhCc
Q 009674 360 GTVTANKVANAVASSLCQMGIKVAT--ICKDD----YEKLKLRIP 398 (529)
Q Consensus 360 Gatg~~kig~ava~~L~~~~~~v~l--~~~~~----~~~l~~~~~ 398 (529)
|++..+-||++||+.|+++|.+|++ |++++ ++++.++.+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~ 45 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG 45 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC
Confidence 4552238999999999999999999 77777 556665544
No 382
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=87.39 E-value=1 Score=47.19 Aligned_cols=138 Identities=22% Similarity=0.298 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh-
Q 009674 284 AINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS- 339 (529)
Q Consensus 284 ~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns- 339 (529)
+-+.-+....+.|++.|++.. -|. +++.++++|.|- ++.+..= |++++ .+=|||=+
T Consensus 44 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~ 123 (297)
T PRK14167 44 ASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHP 123 (297)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcccCcccCCh
Confidence 344446666778888888764 333 333446778774 4555522 22233 12244443
Q ss_pred ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHHHHH
Q 009674 340 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEKLK 394 (529)
Q Consensus 340 ---------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~l-~~~~~~~~l~ 394 (529)
-|+..|++=+ +-.-++|+++|... -||+-+|..|.++ +..|++ .++-
T Consensus 124 ~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~aTVtvchs~T------ 195 (297)
T PRK14167 124 ENVGRLVAGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSD--IVGKPMANLLIQKADGGNATVTVCHSRT------ 195 (297)
T ss_pred hhhHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--ccHHHHHHHHhcCccCCCCEEEEeCCCC------
Confidence 3666666544 44678999999997 9999999999987 788888 2111
Q ss_pred hhCccccccceeeeccccc--CcceEEEE--cC--cCChhhhhcCCCCceeecccccCc
Q 009674 395 LRIPVEAQHNLVLSTSYAA--HKTKIWLV--GD--DLTGKEQARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 395 ~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~--~~~~~~q~~a~~G~~f~~~~~~~~ 447 (529)
.++++ +.++|+|+ |+ .++++.. ++|+++||+. +.+
T Consensus 196 --------------~~l~~~~~~ADIvIsAvGkp~~i~~~~i---k~gaiVIDvG-in~ 236 (297)
T PRK14167 196 --------------DDLAAKTRRADIVVAAAGVPELIDGSML---SEGATVIDVG-INR 236 (297)
T ss_pred --------------CCHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEcc-ccc
Confidence 12222 35667663 53 5777766 9999999998 555
No 383
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=87.35 E-value=1.6 Score=47.02 Aligned_cols=39 Identities=18% Similarity=0.306 Sum_probs=34.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 396 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 396 (529)
+|+++|+ | .+|+++|+.|.++|.++.+ +++++.++++++
T Consensus 2 ~viIiG~-G--~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~ 42 (453)
T PRK09496 2 KIIIVGA-G--QVGYTLAENLSGENNDVTVIDTDEERLRRLQDR 42 (453)
T ss_pred EEEEECC-C--HHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh
Confidence 6899998 6 9999999999999999998 788899888763
No 384
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=87.30 E-value=2.1 Score=46.10 Aligned_cols=110 Identities=19% Similarity=0.305 Sum_probs=71.0
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc--cc-----------ccceeeeccccc--Ccce
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--EA-----------QHNLVLSTSYAA--HKTK 417 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~--~~-----------~~~l~~~~~~~~--~~~~ 417 (529)
+|.++|.. .+|.++|..|++.|.+|+. +++++.+.|++.... +. ..++...+++++ ++++
T Consensus 2 kI~vIGlG---~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~ad 78 (411)
T TIGR03026 2 KIAVIGLG---YVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDAD 78 (411)
T ss_pred EEEEECCC---chhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCC
Confidence 58899975 9999999999999999999 888999988764211 00 112222336653 5665
Q ss_pred EEE--EcCcCCh-------------hhh-hcCCCCceeecccccCcc---CC-------------CCCceeecCCccccC
Q 009674 418 IWL--VGDDLTG-------------KEQ-ARAPKGTIFIPYTQIPPR---KL-------------RKDCFYHSTPAMIIP 465 (529)
Q Consensus 418 vwi--vg~~~~~-------------~~q-~~a~~G~~f~~~~~~~~~---~~-------------R~dc~y~~~~a~~~P 465 (529)
++| |++...+ ++. ..+++|++++.-|-+||. ++ ..||.+..+|..-.|
T Consensus 79 vvii~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~~~~~g~~~~~d~~v~~~Pe~~~~ 158 (411)
T TIGR03026 79 VIIICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVVKPILERASGLKLGEDFYLAYNPEFLRE 158 (411)
T ss_pred EEEEEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCchHHHHHHHHHhhcCCCCCCCceEEECCCcCCC
Confidence 543 6654321 111 235889999998877776 11 135666777766666
Q ss_pred CC
Q 009674 466 PS 467 (529)
Q Consensus 466 ~~ 467 (529)
+.
T Consensus 159 G~ 160 (411)
T TIGR03026 159 GN 160 (411)
T ss_pred CC
Confidence 65
No 385
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=87.07 E-value=1 Score=45.12 Aligned_cols=44 Identities=18% Similarity=0.288 Sum_probs=39.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
.+|+++|.++ -||++.|..+.+.|-+|++ |+++++++.+++.|.
T Consensus 6 nTiLITGG~s--GIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~ 51 (245)
T COG3967 6 NTILITGGAS--GIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE 51 (245)
T ss_pred cEEEEeCCcc--hhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcc
Confidence 3679998875 8999999999999999999 999999999998665
No 386
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=87.05 E-value=1.1 Score=44.71 Aligned_cols=28 Identities=11% Similarity=0.173 Sum_probs=25.1
Q ss_pred EEEEecccCchhhHHHHHHHHhccC--cEEEe
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMG--IKVAT 384 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~--~~v~l 384 (529)
+|+++|+|| .||+++++.|.++| .+|+.
T Consensus 1 ~ilItGatG--~iG~~l~~~l~~~~~~~~v~~ 30 (317)
T TIGR01181 1 RILVTGGAG--FIGSNFVRYILNEHPDAEVIV 30 (317)
T ss_pred CEEEEcCCc--hHHHHHHHHHHHhCCCCEEEE
Confidence 489999999 99999999999876 77876
No 387
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=86.88 E-value=0.79 Score=44.13 Aligned_cols=30 Identities=27% Similarity=0.346 Sum_probs=27.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
.+.++++|++| -||+++|+.|+++|.+|.+
T Consensus 5 ~k~~lVtGas~--~iG~~ia~~l~~~G~~v~~ 34 (235)
T PRK06550 5 TKTVLITGAAS--GIGLAQARAFLAQGAQVYG 34 (235)
T ss_pred CCEEEEcCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 46799999998 9999999999999999988
No 388
>PRK12367 short chain dehydrogenase; Provisional
Probab=86.88 E-value=0.86 Score=45.46 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=29.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK 387 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~ 387 (529)
.+.++++|++| -||+++|+.|+++|.+|.+ |++
T Consensus 14 ~k~~lITGas~--gIG~ala~~l~~~G~~Vi~~~r~~ 48 (245)
T PRK12367 14 GKRIGITGASG--ALGKALTKAFRAKGAKVIGLTHSK 48 (245)
T ss_pred CCEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEECCc
Confidence 46899999998 9999999999999999987 554
No 389
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=86.74 E-value=1.1 Score=46.52 Aligned_cols=64 Identities=20% Similarity=0.306 Sum_probs=44.0
Q ss_pred EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcccc---ccc-eeeeccccc-CcceEEEE
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA---QHN-LVLSTSYAA-HKTKIWLV 421 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~~---~~~-l~~~~~~~~-~~~~vwiv 421 (529)
+|.++|+ | .+|+++|..|+++|. ++.+ +++++.+.+..++.... ..+ .+...++++ ++++++|+
T Consensus 2 kI~IIGa-G--~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIi 74 (306)
T cd05291 2 KVVIIGA-G--HVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVI 74 (306)
T ss_pred EEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEE
Confidence 6899997 6 899999999999885 5666 77888777766653321 111 123335555 78888664
No 390
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=86.69 E-value=1.1 Score=43.48 Aligned_cols=45 Identities=22% Similarity=0.343 Sum_probs=34.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh--HHHHHhhCc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD--YEKLKLRIP 398 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~--~~~l~~~~~ 398 (529)
..+.|+++|+++ -||+++|+.|+++|.++++ ++.++ .+.+++...
T Consensus 4 ~~~~ilITGas~--GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~ 52 (251)
T COG1028 4 SGKVALVTGASS--GIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK 52 (251)
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH
Confidence 457899999997 8999999999999999776 44443 455555433
No 391
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=86.67 E-value=0.86 Score=44.29 Aligned_cols=31 Identities=26% Similarity=0.357 Sum_probs=28.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
..+.++++|++| -||+++|+.|+++|.+|.+
T Consensus 7 ~~k~vlItGas~--~iG~~la~~l~~~G~~v~~ 37 (252)
T PRK08220 7 SGKTVWVTGAAQ--GIGYAVALAFVEAGAKVIG 37 (252)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 346899999998 9999999999999999998
No 392
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=86.63 E-value=1.7 Score=43.22 Aligned_cols=36 Identities=22% Similarity=0.342 Sum_probs=32.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 392 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~ 392 (529)
.++.++|+. .+|+.+|+-|.++|..|++ +++++.++
T Consensus 1 m~iiIiG~G---~vG~~va~~L~~~g~~Vv~Id~d~~~~~~ 38 (225)
T COG0569 1 MKIIIIGAG---RVGRSVARELSEEGHNVVLIDRDEERVEE 38 (225)
T ss_pred CEEEEECCc---HHHHHHHHHHHhCCCceEEEEcCHHHHHH
Confidence 368899988 9999999999999999999 88888876
No 393
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=86.60 E-value=1.1 Score=45.81 Aligned_cols=39 Identities=10% Similarity=0.175 Sum_probs=33.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 395 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 395 (529)
++|.++|+. .+|+++|..|++.|.+|++ ++++++++.++
T Consensus 4 ~~I~ViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~ 44 (291)
T PRK06035 4 KVIGVVGSG---VMGQGIAQVFARTGYDVTIVDVSEEILKNAME 44 (291)
T ss_pred cEEEEECcc---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence 579999996 9999999999999999999 78888776544
No 394
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=86.58 E-value=2.4 Score=42.76 Aligned_cols=55 Identities=25% Similarity=0.225 Sum_probs=41.5
Q ss_pred hhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674 339 SLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 395 (529)
Q Consensus 339 sltaavv~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 395 (529)
-+||+-.+... .+....|++.|++| .+|.++++.+...|.+|.. +++++.+.+++
T Consensus 128 ~~ta~~al~~~~~~~~g~~vlI~ga~g--~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~ 186 (329)
T cd08294 128 GLTAYFGLLEICKPKAGETVVVNGAAG--AVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE 186 (329)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 35555444322 23457899999998 9999999988899999876 78888888876
No 395
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=86.44 E-value=0.55 Score=46.49 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=28.7
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 009674 356 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 390 (529)
Q Consensus 356 V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~ 390 (529)
|+|+|+|| -||+++++.|.++|.+|.. |+.+..
T Consensus 1 vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~ 35 (292)
T TIGR01777 1 ILITGGTG--FIGRALTQRLTKDGHEVTILTRSPPAG 35 (292)
T ss_pred CEEEcccc--hhhHHHHHHHHHcCCEEEEEeCCCCCC
Confidence 68999999 9999999999999999987 655543
No 396
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=86.38 E-value=2 Score=44.32 Aligned_cols=102 Identities=16% Similarity=0.102 Sum_probs=66.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--Cc---ceEEE--EcCc-
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HK---TKIWL--VGDD- 424 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~---~~vwi--vg~~- 424 (529)
+|-++|. | .+|+++|+.|.+.|.+|++ |++++.+.+++. +... ..+.++ +. ++++| +-+.
T Consensus 2 ~Ig~IGl-G--~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~-g~~~------~~s~~~~~~~~~~advVi~~vp~~~ 71 (299)
T PRK12490 2 KLGLIGL-G--KMGGNMAERLREDGHEVVGYDVNQEAVDVAGKL-GITA------RHSLEELVSKLEAPRTIWVMVPAGE 71 (299)
T ss_pred EEEEEcc-c--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-CCee------cCCHHHHHHhCCCCCEEEEEecCch
Confidence 4788884 4 9999999999999999988 888888888653 2111 113332 22 44544 2221
Q ss_pred -CCh--hhh-hcCCCCceeecccccCcc-------CC-CCCceeecCCccccCC
Q 009674 425 -LTG--KEQ-ARAPKGTIFIPYTQIPPR-------KL-RKDCFYHSTPAMIIPP 466 (529)
Q Consensus 425 -~~~--~~q-~~a~~G~~f~~~~~~~~~-------~~-R~dc~y~~~~a~~~P~ 466 (529)
+.. ++. ..+++|.++++.|.++|. ++ ++.+.|.+-|.+--|.
T Consensus 72 ~~~~v~~~i~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~vdapV~G~~~ 125 (299)
T PRK12490 72 VTESVIKDLYPLLSPGDIVVDGGNSRYKDDLRRAEELAERGIHYVDCGTSGGVW 125 (299)
T ss_pred HHHHHHHHHhccCCCCCEEEECCCCCchhHHHHHHHHHHcCCeEEeCCCCCCHH
Confidence 111 122 235789999999988886 11 2578899988886554
No 397
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=86.28 E-value=1.1 Score=42.67 Aligned_cols=27 Identities=22% Similarity=0.397 Sum_probs=25.2
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 356 VLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 356 V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
|+++|||| =||+++++.|.++|.+|+.
T Consensus 1 IlI~GatG--~iG~~l~~~l~~~g~~v~~ 27 (236)
T PF01370_consen 1 ILITGATG--FIGSALVRQLLKKGHEVIV 27 (236)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTTEEEE
T ss_pred EEEEccCC--HHHHHHHHHHHHcCCcccc
Confidence 78999999 9999999999999999665
No 398
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=86.24 E-value=2.1 Score=43.02 Aligned_cols=86 Identities=16% Similarity=0.195 Sum_probs=58.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--c----cc---c-CcceEE
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S----YA---A-HKTKIW 419 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~--~----~~---~-~~~~vw 419 (529)
....|++.|++| .||.++++.+...|.++.. ++.++.+.+++. +.+ .++... + ++ . +..+++
T Consensus 139 ~g~~vlI~g~~g--~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~-g~~---~~~~~~~~~~~~~i~~~~~~~~~d~v 212 (324)
T cd08292 139 PGQWLIQNAAGG--AVGKLVAMLAAARGINVINLVRRDAGVAELRAL-GIG---PVVSTEQPGWQDKVREAAGGAPISVA 212 (324)
T ss_pred CCCEEEEccccc--HHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhc-CCC---EEEcCCCchHHHHHHHHhCCCCCcEE
Confidence 356899999998 9999999988899999877 677777877653 321 112111 1 11 1 345666
Q ss_pred E--EcCcCChhhhhcCCCCceeeccc
Q 009674 420 L--VGDDLTGKEQARAPKGTIFIPYT 443 (529)
Q Consensus 420 i--vg~~~~~~~q~~a~~G~~f~~~~ 443 (529)
+ +|.....+-.+.++++-.|+.+.
T Consensus 213 ~d~~g~~~~~~~~~~l~~~g~~v~~g 238 (324)
T cd08292 213 LDSVGGKLAGELLSLLGEGGTLVSFG 238 (324)
T ss_pred EECCCChhHHHHHHhhcCCcEEEEEe
Confidence 6 55545555566777888888886
No 399
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=85.94 E-value=1.4 Score=43.31 Aligned_cols=42 Identities=19% Similarity=0.269 Sum_probs=35.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 395 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 395 (529)
....|++.|++| .+|.++++.+...|.++.+ +++++.+.+++
T Consensus 139 ~~~~vlv~g~~~--~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~ 182 (323)
T cd05276 139 AGETVLIHGGAS--GVGTAAIQLAKALGARVIATAGSEEKLEACRA 182 (323)
T ss_pred CCCEEEEEcCcC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH
Confidence 356899999997 9999999999999999887 77778877743
No 400
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=85.82 E-value=1.3 Score=45.59 Aligned_cols=40 Identities=13% Similarity=0.287 Sum_probs=35.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 396 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 396 (529)
++|.++|+. .+|+++|..|.+.|.+|++ +++++.++++++
T Consensus 5 ~~I~vIGaG---~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~ 46 (311)
T PRK06130 5 QNLAIIGAG---TMGSGIAALFARKGLQVVLIDVMEGALERARGV 46 (311)
T ss_pred cEEEEECCC---HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence 579999995 9999999999999999999 788888888764
No 401
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=85.82 E-value=2.5 Score=48.38 Aligned_cols=35 Identities=23% Similarity=0.255 Sum_probs=29.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchh
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKD 388 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~ 388 (529)
..++|+|+|+|| =||+.+++.|.++ |.+|.. |+.+
T Consensus 314 ~~~~VLVTGatG--FIGs~Lv~~Ll~~~g~~V~~l~r~~~ 351 (660)
T PRK08125 314 RRTRVLILGVNG--FIGNHLTERLLRDDNYEVYGLDIGSD 351 (660)
T ss_pred cCCEEEEECCCc--hHHHHHHHHHHhCCCcEEEEEeCCch
Confidence 366899999999 9999999999975 789987 4443
No 402
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=85.71 E-value=2.6 Score=43.21 Aligned_cols=84 Identities=7% Similarity=0.147 Sum_probs=53.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc----EEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE-----
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGI----KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----- 420 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~----~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----- 420 (529)
.+|.++|. | .+|.++++.|.+.|. ++.. |+++++++++++.+.+. .++.++ ++++++|
T Consensus 3 ~~IgfIG~-G--~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~------~~~~~e~~~~aDiIiLavkP 73 (272)
T PRK12491 3 KQIGFIGC-G--NMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITI------TTNNNEVANSADILILSIKP 73 (272)
T ss_pred CeEEEECc-c--HHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEE------eCCcHHHHhhCCEEEEEeCh
Confidence 46899994 4 999999999998774 5666 77888888876543211 224433 5666655
Q ss_pred --EcCcCChhhhh-cCCCCceeecccc-cCcc
Q 009674 421 --VGDDLTGKEQA-RAPKGTIFIPYTQ-IPPR 448 (529)
Q Consensus 421 --vg~~~~~~~q~-~a~~G~~f~~~~~-~~~~ 448 (529)
+.+.+ ++.. ..++|++++++.- ++-+
T Consensus 74 ~~~~~vl--~~l~~~~~~~~lvISi~AGi~i~ 103 (272)
T PRK12491 74 DLYSSVI--NQIKDQIKNDVIVVTIAAGKSIK 103 (272)
T ss_pred HHHHHHH--HHHHHhhcCCcEEEEeCCCCcHH
Confidence 22222 1221 1457788888875 5444
No 403
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=85.69 E-value=2.3 Score=44.88 Aligned_cols=83 Identities=14% Similarity=0.183 Sum_probs=56.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCc---
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDD--- 424 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~--- 424 (529)
..++|.++|.- .||+++|+.|...|.+|.. ++.+..... + + ...++++ ++++++++--.
T Consensus 145 ~g~~VgIIG~G---~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~---~--~------~~~~l~ell~~aDiVil~lP~t~ 210 (330)
T PRK12480 145 KNMTVAIIGTG---RIGAATAKIYAGFGATITAYDAYPNKDLDF---L--T------YKDSVKEAIKDADIISLHVPANK 210 (330)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEEeCChhHhhhh---h--h------ccCCHHHHHhcCCEEEEeCCCcH
Confidence 34579999975 9999999999999999998 433321100 0 0 1225554 56766553333
Q ss_pred -----CChhhhhcCCCCceeecccc---cCcc
Q 009674 425 -----LTGKEQARAPKGTIFIPYTQ---IPPR 448 (529)
Q Consensus 425 -----~~~~~q~~a~~G~~f~~~~~---~~~~ 448 (529)
+..+...++++|++++.++| ++..
T Consensus 211 ~t~~li~~~~l~~mk~gavlIN~aRG~~vd~~ 242 (330)
T PRK12480 211 ESYHLFDKAMFDHVKKGAILVNAARGAVINTP 242 (330)
T ss_pred HHHHHHhHHHHhcCCCCcEEEEcCCccccCHH
Confidence 34467778999999999999 5544
No 404
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=85.69 E-value=0.69 Score=48.68 Aligned_cols=25 Identities=8% Similarity=0.199 Sum_probs=22.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGI 380 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~ 380 (529)
.+|.++||+| .||+.+|..|+.+|+
T Consensus 3 ~KV~IiGa~G--~VG~~~a~~l~~~~~ 27 (322)
T cd01338 3 VRVAVTGAAG--QIGYSLLFRIASGEM 27 (322)
T ss_pred eEEEEECCCc--HHHHHHHHHHHhccc
Confidence 4799999998 999999999997777
No 405
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=85.66 E-value=1.3 Score=51.54 Aligned_cols=42 Identities=12% Similarity=0.124 Sum_probs=35.4
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 009674 350 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 394 (529)
Q Consensus 350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 394 (529)
|+.-++|.|+||- -+|+.||..+++.|++|.+ ++.+.+++-+
T Consensus 310 ~~~i~~v~ViGaG---~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~ 353 (714)
T TIGR02437 310 AKDVKQAAVLGAG---IMGGGIAYQSASKGTPIVMKDINQHSLDLGL 353 (714)
T ss_pred ccccceEEEECCc---hHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 4567789999998 8999999999999999999 7777766543
No 406
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=85.65 E-value=1.7 Score=48.69 Aligned_cols=100 Identities=20% Similarity=0.224 Sum_probs=65.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--------
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------- 421 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------- 421 (529)
..++|.++|-- .||+++|+.|...|.+|...++..-.+-..+.+.. .+.++++ ++++++++
T Consensus 137 ~gktvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~------~~~~l~ell~~aDvV~l~lPlt~~T 207 (525)
T TIGR01327 137 YGKTLGVIGLG---RIGSIVAKRAKAFGMKVLAYDPYISPERAEQLGVE------LVDDLDELLARADFITVHTPLTPET 207 (525)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCE------EcCCHHHHHhhCCEEEEccCCChhh
Confidence 45789999975 99999999999999999883221001111111111 1235654 56776552
Q ss_pred cCcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCceeecCC
Q 009674 422 GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHSTP 460 (529)
Q Consensus 422 g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~~ 460 (529)
-..++.+...+|++|++++.++| ++.+ +++ -|++..+-+
T Consensus 208 ~~li~~~~l~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gAaLDVf~~EP~ 261 (525)
T TIGR01327 208 RGLIGAEELAKMKKGVIIVNCARGGIIDEAALYEALEEGHVRAAALDVFEKEPP 261 (525)
T ss_pred ccCcCHHHHhcCCCCeEEEEcCCCceeCHHHHHHHHHcCCeeEEEEecCCCCCC
Confidence 23466788999999999999999 4443 444 677766643
No 407
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=85.64 E-value=0.91 Score=47.81 Aligned_cols=24 Identities=17% Similarity=0.325 Sum_probs=21.5
Q ss_pred EEEEecccCchhhHHHHHHHHhccCc
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGI 380 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~ 380 (529)
+|.++||+| .||+.+|..|+.+++
T Consensus 2 KV~IiGAaG--~VG~~~a~~L~~~~~ 25 (323)
T cd00704 2 HVLITGAAG--QIGYNLLFLIASGEL 25 (323)
T ss_pred EEEEECCCc--HHHHHHHHHHHhCCc
Confidence 689999999 999999999997664
No 408
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=85.63 E-value=1.7 Score=45.66 Aligned_cols=139 Identities=20% Similarity=0.258 Sum_probs=77.3
Q ss_pred HcCCcEEEeccc-ccc---cccccCCceeeecCCCCcceeeecCChh-----HHHHHHhc---CcCCCcEEEEecccCch
Q 009674 298 AKGVKVISLGLL-NQG---EELNRNGEIYLERQPNKLKIKVVDGSSL-----AAAVVVNS---LPKTTAHVLLRGTVTAN 365 (529)
Q Consensus 298 k~G~kv~~LG~l-n~~---e~ln~~g~~~~~k~p~~L~irvv~Gnsl-----taavv~~~---i~~~~~~V~~~Gatg~~ 365 (529)
+-|=+|+.+|.. ..+ |-.+-..+..+ +.|++|. ....-++ ||+..+.+ ++. ..+|++.||+|
T Consensus 80 ~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~-~~P~~ls--~~eAAal~~~~~TA~~~l~~~~~l~~-g~~VLV~gaaG-- 153 (326)
T COG0604 80 KVGDRVAALGGVGRDGGYAEYVVVPADWLV-PLPDGLS--FEEAAALPLAGLTAWLALFDRAGLKP-GETVLVHGAAG-- 153 (326)
T ss_pred CCCCEEEEccCCCCCCcceeEEEecHHHce-eCCCCCC--HHHHHHHHHHHHHHHHHHHHhcCCCC-CCEEEEecCCc--
Confidence 578888888511 111 33333332322 3365222 2233333 77777887 222 67899999998
Q ss_pred hhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccc-----ee-eeccccc-CcceEEE--EcCcCChhhhhcCC
Q 009674 366 KVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHN-----LV-LSTSYAA-HKTKIWL--VGDDLTGKEQARAP 434 (529)
Q Consensus 366 kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~-----l~-~~~~~~~-~~~~vwi--vg~~~~~~~q~~a~ 434 (529)
-||++..+.+...|..+.. .+.++.+ +.++++...-.+ ++ ++.++.. +..++++ +|...-.+-...+.
T Consensus 154 gVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~ 232 (326)
T COG0604 154 GVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALA 232 (326)
T ss_pred hHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhc
Confidence 9999999999999854333 6667777 445555543222 12 1222222 3456666 55444444444445
Q ss_pred CCceeeccc
Q 009674 435 KGTIFIPYT 443 (529)
Q Consensus 435 ~G~~f~~~~ 443 (529)
+|-.++.+-
T Consensus 233 ~~G~lv~ig 241 (326)
T COG0604 233 PGGRLVSIG 241 (326)
T ss_pred cCCEEEEEe
Confidence 555555544
No 409
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=85.62 E-value=5.9 Score=40.95 Aligned_cols=28 Identities=14% Similarity=0.164 Sum_probs=25.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
.+|.++|+- .+|+++|+.|++.|.+|.+
T Consensus 5 m~I~iiG~G---~~G~~lA~~l~~~G~~V~~ 32 (308)
T PRK14619 5 KTIAILGAG---AWGSTLAGLASANGHRVRV 32 (308)
T ss_pred CEEEEECcc---HHHHHHHHHHHHCCCEEEE
Confidence 468999886 9999999999999999999
No 410
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=85.57 E-value=0.97 Score=47.66 Aligned_cols=25 Identities=8% Similarity=0.203 Sum_probs=22.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGI 380 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~ 380 (529)
-+|.++||+| .||+++|..|+.+++
T Consensus 4 ~KV~IIGa~G--~VG~~~a~~l~~~~~ 28 (323)
T TIGR01759 4 VRVAVTGAAG--QIGYSLLFRIASGEL 28 (323)
T ss_pred eEEEEECCCc--HHHHHHHHHHHhCCc
Confidence 3799999999 999999999997776
No 411
>PRK05442 malate dehydrogenase; Provisional
Probab=85.47 E-value=0.73 Score=48.61 Aligned_cols=25 Identities=8% Similarity=0.211 Sum_probs=22.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGI 380 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~ 380 (529)
.+|.++||+| .||+.+|..|+.+++
T Consensus 5 ~KV~IiGaaG--~VG~~~a~~l~~~~~ 29 (326)
T PRK05442 5 VRVAVTGAAG--QIGYSLLFRIASGDM 29 (326)
T ss_pred cEEEEECCCc--HHHHHHHHHHHhhhh
Confidence 4899999998 999999999997666
No 412
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=85.41 E-value=1 Score=48.16 Aligned_cols=38 Identities=18% Similarity=0.217 Sum_probs=32.1
Q ss_pred hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEecc
Q 009674 347 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 386 (529)
Q Consensus 347 ~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~ 386 (529)
+.+++...+|.++|.+| .+|..+|+.|.+.|..|.+.+
T Consensus 92 ~~~~~~~~~I~IiGG~G--lmG~slA~~l~~~G~~V~~~d 129 (374)
T PRK11199 92 KTLNPDLRPVVIVGGKG--QLGRLFAKMLTLSGYQVRILE 129 (374)
T ss_pred cccCcccceEEEEcCCC--hhhHHHHHHHHHCCCeEEEeC
Confidence 34444667899999999 999999999999999999943
No 413
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=85.32 E-value=3 Score=43.00 Aligned_cols=86 Identities=13% Similarity=0.217 Sum_probs=53.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCcCCh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLTG 427 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~~ 427 (529)
.+|.++| +| .+|+++|+.|.+.|. +|.. |++++.+.+++. +... . ...+.++ ++++++|+--....
T Consensus 7 ~~I~IIG-~G--~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~-g~~~--~--~~~~~~~~~~~aDvViiavp~~~ 78 (307)
T PRK07502 7 DRVALIG-IG--LIGSSLARAIRRLGLAGEIVGADRSAETRARAREL-GLGD--R--VTTSAAEAVKGADLVILCVPVGA 78 (307)
T ss_pred cEEEEEe-eC--HHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhC-CCCc--e--ecCCHHHHhcCCCEEEECCCHHH
Confidence 4799999 56 999999999998885 6776 777777776543 1100 0 1124443 67777664222111
Q ss_pred -----hhh-hcCCCCceeecccccCc
Q 009674 428 -----KEQ-ARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 428 -----~~q-~~a~~G~~f~~~~~~~~ 447 (529)
++. ..+++|+++++++-+..
T Consensus 79 ~~~v~~~l~~~l~~~~iv~dvgs~k~ 104 (307)
T PRK07502 79 SGAVAAEIAPHLKPGAIVTDVGSVKA 104 (307)
T ss_pred HHHHHHHHHhhCCCCCEEEeCccchH
Confidence 112 23578888888876543
No 414
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=85.08 E-value=2.1 Score=43.24 Aligned_cols=101 Identities=18% Similarity=0.123 Sum_probs=61.7
Q ss_pred hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee--ecc
Q 009674 340 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL--STS 410 (529)
Q Consensus 340 ltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~--~~~ 410 (529)
+||+..++.+. ++..+|++.|++| .+|.++++.+.+.|.+|.. +++++.+.+++ ++.+.-.+.-. ...
T Consensus 129 ~ta~~~l~~~~~~~~~~~~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~ 205 (326)
T cd08289 129 FTAALSIHRLEENGLTPEQGPVLVTGATG--GVGSLAVSILAKLGYEVVASTGKADAADYLKK-LGAKEVIPREELQEES 205 (326)
T ss_pred HHHHHHHHHHHhcCCCCCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-cCCCEEEcchhHHHHH
Confidence 35555555432 2356899999998 9999999999999999887 78888888854 44321111000 001
Q ss_pred ccc---CcceEEE--EcCcCChhhhhcCCCCceeeccc
Q 009674 411 YAA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT 443 (529)
Q Consensus 411 ~~~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~ 443 (529)
+++ ..+++++ +|.....+-...++++-+++.+.
T Consensus 206 ~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g 243 (326)
T cd08289 206 IKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSG 243 (326)
T ss_pred HHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEe
Confidence 111 2356665 33333334455667777788876
No 415
>PLN02858 fructose-bisphosphate aldolase
Probab=85.07 E-value=1.3 Score=55.00 Aligned_cols=182 Identities=12% Similarity=0.090 Sum_probs=104.3
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccc-cc-cc-cCCceee---ecC-CCCcceeeecCChhHHH---H
Q 009674 275 QYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQG-EE-LN-RNGEIYL---ERQ-PNKLKIKVVDGSSLAAA---V 344 (529)
Q Consensus 275 ~y~~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~-e~-ln-~~g~~~~---~k~-p~~L~irvv~Gnsltaa---v 344 (529)
+|.-.|..+-+.|-+.-|...|++.|+..-...+..+. ++ .+ |.|+.-. .|. .+.-.+++.+-|+=--+ -
T Consensus 233 d~~~~F~l~l~~KDl~la~~~A~~~g~~lpl~~~a~~~~~~a~~~G~g~~D~sav~~~~~~~~g~~~~~~~~~~~~~~~~ 312 (1378)
T PLN02858 233 DYIEGRFLNVLVQNLGIVLDMAKSLPFPLPLLAVAHQQLISGSSSMQGDDTATSLAKVWEKVFGVNILEAANRELYKPED 312 (1378)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHcCCCccccccccccChHH
Confidence 34444556777788889999999999987654444443 11 11 1111100 000 00000122222221100 0
Q ss_pred HHhcC---cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--Ccce
Q 009674 345 VVNSL---PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTK 417 (529)
Q Consensus 345 v~~~i---~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~ 417 (529)
--+++ +|..++|-++|-- .+|+++|+.|.+.|.+|.. |+.++.+.++++-. ....+.++ ++++
T Consensus 313 ~~~~~~~~~~~~~~IGfIGlG---~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga-------~~~~s~~e~~~~aD 382 (1378)
T PLN02858 313 LAKQITMQAKPVKRIGFIGLG---AMGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGG-------LAGNSPAEVAKDVD 382 (1378)
T ss_pred HHHHhhccccCCCeEEEECch---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC-------eecCCHHHHHhcCC
Confidence 00110 3445789999855 9999999999999999988 88888888876511 01223332 4565
Q ss_pred EEE--Ec------CcCC-hh-hhhcCCCCceeecccccCccCC----------CCCceeecCCccccCC
Q 009674 418 IWL--VG------DDLT-GK-EQARAPKGTIFIPYTQIPPRKL----------RKDCFYHSTPAMIIPP 466 (529)
Q Consensus 418 vwi--vg------~~~~-~~-~q~~a~~G~~f~~~~~~~~~~~----------R~dc~y~~~~a~~~P~ 466 (529)
+++ |. +.+. +. -...+++|.++++.|-++|... +++..|.+.|.+--|.
T Consensus 383 vVi~~V~~~~~v~~Vl~g~~g~~~~l~~g~ivVd~STvsP~~~~~la~~l~~~g~g~~~lDAPVsGg~~ 451 (1378)
T PLN02858 383 VLVIMVANEVQAENVLFGDLGAVSALPAGASIVLSSTVSPGFVIQLERRLENEGRDIKLVDAPVSGGVK 451 (1378)
T ss_pred EEEEecCChHHHHHHHhchhhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHhhCCCcEEEEccCCCChh
Confidence 544 32 1121 11 1234589999999999888722 1588899988876555
No 416
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=85.04 E-value=2 Score=48.20 Aligned_cols=41 Identities=24% Similarity=0.395 Sum_probs=36.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 396 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 396 (529)
+.+|.+||.. ++|+.+|+.|.++|.++++ .|+|+.++++++
T Consensus 417 ~~hiiI~G~G---~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~ 459 (558)
T PRK10669 417 CNHALLVGYG---RVGSLLGEKLLAAGIPLVVIETSRTRVDELRER 459 (558)
T ss_pred CCCEEEECCC---hHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHC
Confidence 6899999998 9999999999999999988 888888888754
No 417
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=85.00 E-value=2.9 Score=46.85 Aligned_cols=91 Identities=15% Similarity=0.184 Sum_probs=63.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc-ccc-----------eeeec-cc-----
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA-QHN-----------LVLST-SY----- 411 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~-~~~-----------l~~~~-~~----- 411 (529)
..++|+|.|+- -||...+..+...|-+|.. ++.+|++..++ ++.+. ..+ ....+ ++
T Consensus 164 pg~kVlViGaG---~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 164 PPAKVLVIGAG---VAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CCCEEEEECCc---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 37799999998 8999999999999998877 78888886655 44331 011 00111 21
Q ss_pred ---cc--CcceEEEEcCc---------CChhhhhcCCCCceeecccccCc
Q 009674 412 ---AA--HKTKIWLVGDD---------LTGKEQARAPKGTIFIPYTQIPP 447 (529)
Q Consensus 412 ---~~--~~~~vwivg~~---------~~~~~q~~a~~G~~f~~~~~~~~ 447 (529)
.+ +.+|++|-... ++++..+.+++|.++++++ +++
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg-~~~ 288 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLA-AEN 288 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEc-cCC
Confidence 11 34788883333 3788999999999999999 653
No 418
>PLN02996 fatty acyl-CoA reductase
Probab=84.97 E-value=1.1 Score=49.75 Aligned_cols=25 Identities=12% Similarity=0.272 Sum_probs=22.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhcc
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQM 378 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~ 378 (529)
+.+.|+|+|+|| -||+++++.|.+.
T Consensus 10 ~~k~VlvTGaTG--FlG~~ll~~LL~~ 34 (491)
T PLN02996 10 ENKTILVTGATG--FLAKIFVEKILRV 34 (491)
T ss_pred CCCeEEEeCCCc--HHHHHHHHHHHhh
Confidence 456899999999 9999999998864
No 419
>KOG3011 consensus Ubiquitin-conjugating enzyme [Posttranslational modification, protein turnover, chaperones]
Probab=84.96 E-value=0.84 Score=46.44 Aligned_cols=134 Identities=16% Similarity=0.316 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhch-----hhh----hhhhcccCCCCCCCCcccccccCcHHHHHHHHH----HHHHHH
Q 009674 18 VILTILVHMGPVEFLYYWFHRALHH-----HYL----YSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLL----FAIPLV 84 (529)
Q Consensus 18 ~i~~lll~llv~Df~~Yw~HRllH~-----~~L----y~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l----~~iPll 84 (529)
.+++.+...+..||.-=.+|++--. .++ +-+ =+-||.. |++-.++.++|.+..... ...|+-
T Consensus 109 ~~La~~aG~i~AD~~SGl~HWaaD~~Gsv~tP~vG~~f~r-freHH~d----P~tITr~~f~~~~~ll~~a~~f~v~~~d 183 (293)
T KOG3011|consen 109 PALAAYAGYITADLGSGVYHWAADNYGSVSTPWVGRQFER-FQEHHKD----PWTITRRQFANNLHLLARAYTFIVLPLD 183 (293)
T ss_pred HHHHHHHHHHHHhhhcceeEeeccccCccccchhHHHHHH-HHhccCC----cceeeHHHHhhhhHHHHHhheeEecCHH
Confidence 5667777788899999899987543 111 234 4568865 677777777776533211 112222
Q ss_pred HHH--HhhhhhHHHHHHHHHHHHHHHHhcccceeeccccc--ccccCcchhcccChhhhhhhhcC-CCCCccCCcchhhh
Q 009674 85 TTM--VLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWL--FTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDY 159 (529)
Q Consensus 85 ~~~--~lg~~si~~v~~y~i~~~~~~~l~Hsn~e~~P~~~--f~~lp~L~yli~tP~~H~lHH~~-~~~NYG~~~~lWDr 159 (529)
.+. ....+-+.++.+++++......+.|.-..+ |.+. .+.++ ++..-++|..||.. .++|||....+|.+
T Consensus 184 ~~~q~~~~h~fV~~~~i~v~~tnQiHkWsHTy~gL-P~wVv~LQd~h----lilpRkhH~iHH~aPh~~yyCI~tGw~N~ 258 (293)
T KOG3011|consen 184 LAFQDPVFHGFVFLFAICVLFTNQIHKWSHTYSGL-PPWVVLLQDMH----LILPRKHHRIHHVAPHNTYYCIVSGWWNW 258 (293)
T ss_pred HHhhcccHHHHHHHHHHHHHHHHHHHHHHhhhccC-chHHHHHhhcc----eecccccccccccCccccceEEeechhhc
Confidence 111 001112233344555666667788965544 5542 12222 45578899999987 89999999999987
Q ss_pred hc
Q 009674 160 IY 161 (529)
Q Consensus 160 LF 161 (529)
..
T Consensus 259 ~L 260 (293)
T KOG3011|consen 259 VL 260 (293)
T ss_pred hH
Confidence 63
No 420
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=84.94 E-value=0.85 Score=47.76 Aligned_cols=95 Identities=15% Similarity=0.211 Sum_probs=62.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEc------
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------ 422 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg------ 422 (529)
.++|.++|-- +||+++|+.|..-|.+|.. +++++.. +.... ....++++ ++++++++-
T Consensus 136 g~tvgIvG~G---~IG~~vA~~l~afG~~V~~~~~~~~~~~--------~~~~~-~~~~~l~e~l~~aDvvv~~lPlt~~ 203 (312)
T PRK15469 136 DFTIGILGAG---VLGSKVAQSLQTWGFPLRCWSRSRKSWP--------GVQSF-AGREELSAFLSQTRVLINLLPNTPE 203 (312)
T ss_pred CCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCCCCCC--------Cceee-cccccHHHHHhcCCEEEECCCCCHH
Confidence 4688899876 9999999999999999988 2222110 10000 11224554 677776632
Q ss_pred --CcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCceeecC
Q 009674 423 --DDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 459 (529)
Q Consensus 423 --~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 459 (529)
..++.+...+|++|++++.++| |+.+ .+| -|++..+-
T Consensus 204 T~~li~~~~l~~mk~ga~lIN~aRG~vVde~aL~~aL~~g~i~gaalDVf~~EP 257 (312)
T PRK15469 204 TVGIINQQLLEQLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFSREP 257 (312)
T ss_pred HHHHhHHHHHhcCCCCcEEEECCCccccCHHHHHHHHhcCCeeeEEecCCCCCC
Confidence 2345567889999999999999 5544 334 47777664
No 421
>PLN02527 aspartate carbamoyltransferase
Probab=84.91 E-value=9.4 Score=40.03 Aligned_cols=159 Identities=15% Similarity=0.225 Sum_probs=95.8
Q ss_pred HHHcCCcEEEecc------ccccccc-------ccCCceeeecCCC---------CcceeeecCCh----------hHHH
Q 009674 296 ADAKGVKVISLGL------LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS----------LAAA 343 (529)
Q Consensus 296 A~k~G~kv~~LG~------ln~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns----------ltaa 343 (529)
+.++|.+++.|+. +.++|.+ ++..-+.+.|+|+ ...++|+.+-+ .=+.
T Consensus 61 ~~~LGg~~i~l~~~~~~s~~~kgEs~~Dta~vls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~g~~~HPtQ~LaDl~ 140 (306)
T PLN02527 61 MKRLGGEVLTTENAGEFSSAAKGETLEDTIRTVEGYSDIIVLRHFESGAARRAAATAEIPVINAGDGPGQHPTQALLDVY 140 (306)
T ss_pred HHHcCCCEEEeCCCCCccccCCCcCHHHHHHHHHHhCcEEEEECCChhHHHHHHHhCCCCEEECCCCCCCChHHHHHHHH
Confidence 4589999999965 2345554 6677788889986 35688887622 1245
Q ss_pred HHHhcCcC-CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEecchhhHH---HHHhhCccccccceeeec-cccc--Cc
Q 009674 344 VVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYAA--HK 415 (529)
Q Consensus 344 vv~~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l~~~~~~~---~l~~~~~~~~~~~l~~~~-~~~~--~~ 415 (529)
++.+.... +..+|+++|..+-+.+.+..+..|++. |..+.+-..+.|+ .+.+++. +.+.+ +.++ +.++ ++
T Consensus 141 Ti~e~~g~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~-~~g~~-~~~~~d~~~a~~~ 218 (306)
T PLN02527 141 TIQREIGRLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDVVKMKDDIKDYLT-SKGVE-WEESSDLMEVASK 218 (306)
T ss_pred HHHHHhCCcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCccCCCHHHHHHHH-HcCCE-EEEEcCHHHHhCC
Confidence 56555432 457999999863137889999998886 9999883333331 2222221 23333 3344 7764 89
Q ss_pred ceEEEEcCcCChhhhhcCCCCcee----ecccccCcc---CCCCCce-eecCC
Q 009674 416 TKIWLVGDDLTGKEQARAPKGTIF----IPYTQIPPR---KLRKDCF-YHSTP 460 (529)
Q Consensus 416 ~~vwivg~~~~~~~q~~a~~G~~f----~~~~~~~~~---~~R~dc~-y~~~~ 460 (529)
++|+.. ++++.|+.. .+-..+ =+| |++.+ ..|+||. .|.+|
T Consensus 219 aDvvyt-~~~q~e~~~--~~~~~~~~~~~~y-~v~~~ll~~a~~~~ivmHclP 267 (306)
T PLN02527 219 CDVLYQ-TRIQRERFG--ERIDLYEAARGKY-IVDKKVMDVLPKHAVVMHPLP 267 (306)
T ss_pred CCEEEE-CCcchhhhc--chHHHHHHhCCCc-eECHHHHhccCCCCEEECCCC
Confidence 998887 555533210 000111 123 37776 4567874 56666
No 422
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=84.78 E-value=3.4 Score=44.70 Aligned_cols=80 Identities=14% Similarity=0.014 Sum_probs=55.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEEEc-------
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------- 422 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg------- 422 (529)
..++|-++|.- .||+.+|+.|..-|.+|+..+..+- .. .+. ....++++ +.++++++-
T Consensus 115 ~gktvGIIG~G---~IG~~va~~l~a~G~~V~~~Dp~~~-----~~-~~~----~~~~~l~ell~~aDiV~lh~Plt~~g 181 (381)
T PRK00257 115 AERTYGVVGAG---HVGGRLVRVLRGLGWKVLVCDPPRQ-----EA-EGD----GDFVSLERILEECDVISLHTPLTKEG 181 (381)
T ss_pred CcCEEEEECCC---HHHHHHHHHHHHCCCEEEEECCccc-----cc-ccC----ccccCHHHHHhhCCEEEEeCcCCCCc
Confidence 46789999985 9999999999999999998332110 00 010 11234554 566665522
Q ss_pred -----CcCChhhhhcCCCCceeecccc
Q 009674 423 -----DDLTGKEQARAPKGTIFIPYTQ 444 (529)
Q Consensus 423 -----~~~~~~~q~~a~~G~~f~~~~~ 444 (529)
.-++.+.+.++++|+++|-.+|
T Consensus 182 ~~~T~~li~~~~l~~mk~gailIN~aR 208 (381)
T PRK00257 182 EHPTRHLLDEAFLASLRPGAWLINASR 208 (381)
T ss_pred cccccccCCHHHHhcCCCCeEEEECCC
Confidence 2356678999999999999999
No 423
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=84.78 E-value=1.9 Score=42.62 Aligned_cols=86 Identities=12% Similarity=0.102 Sum_probs=53.0
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEec-chhhHHHHHhh-Cccccc--cceeeec-cccc--CcceEEEE-
Q 009674 350 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI-CKDDYEKLKLR-IPVEAQ--HNLVLST-SYAA--HKTKIWLV- 421 (529)
Q Consensus 350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~-~~~~~~~l~~~-~~~~~~--~~l~~~~-~~~~--~~~~vwiv- 421 (529)
+-.-++|+++|... -||+-+|..|.++|-.|++- +..-+..-+.. +..+.. .+ .+ ++++ +.++|+|+
T Consensus 59 ~l~GK~vvVIGrS~--iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~---~~~~l~~~~~~ADIVIsA 133 (197)
T cd01079 59 RLYGKTITIINRSE--VVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEKHHVTD---EEAMTLDCLSQSDVVITG 133 (197)
T ss_pred CCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEEecCcccccccccccccccccccc---hhhHHHHHhhhCCEEEEc
Confidence 45688999999997 99999999999999999982 11111100000 101110 01 01 1333 56777774
Q ss_pred -cC--c-CChhhhhcCCCCceeeccc
Q 009674 422 -GD--D-LTGKEQARAPKGTIFIPYT 443 (529)
Q Consensus 422 -g~--~-~~~~~q~~a~~G~~f~~~~ 443 (529)
|+ . ++++.. ++|+++||+.
T Consensus 134 vG~~~~~i~~d~i---k~GavVIDVG 156 (197)
T cd01079 134 VPSPNYKVPTELL---KDGAICINFA 156 (197)
T ss_pred cCCCCCccCHHHc---CCCcEEEEcC
Confidence 33 2 555555 9999999998
No 424
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=84.67 E-value=3 Score=41.52 Aligned_cols=100 Identities=15% Similarity=0.073 Sum_probs=60.2
Q ss_pred hHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc----ccee-eecc
Q 009674 340 LAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ----HNLV-LSTS 410 (529)
Q Consensus 340 ltaavv~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~----~~l~-~~~~ 410 (529)
+||+..++.+- +....|++.|++| .+|.++++.+..+|.+|.. +++++.+.++ +++...- ..+. ++.+
T Consensus 128 ~ta~~~l~~~~~~~~g~~vlV~ga~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~i~~ 204 (320)
T cd08243 128 YTAWGSLFRSLGLQPGDTLLIRGGTS--SVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVIDDGAIAEQLRA 204 (320)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEecCccHHHHHHH
Confidence 45555555542 2357999999998 9999999999999999877 6777777774 3332110 0100 0111
Q ss_pred cccCcceEEE--EcCcCChhhhhcCCCCceeeccc
Q 009674 411 YAAHKTKIWL--VGDDLTGKEQARAPKGTIFIPYT 443 (529)
Q Consensus 411 ~~~~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~ 443 (529)
+ .+..++++ +|.....+-.+.++++-+|+.+.
T Consensus 205 ~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g 238 (320)
T cd08243 205 A-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTG 238 (320)
T ss_pred h-CCCceEEEECCChHHHHHHHHHhccCCEEEEEc
Confidence 1 12345555 33333344455667777777766
No 425
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=84.60 E-value=1.1 Score=47.14 Aligned_cols=64 Identities=22% Similarity=0.278 Sum_probs=39.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcE-EEe---cchhhHHHHHhhCccccc---cceeeec-c--ccc-CcceEEEE
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIK-VAT---ICKDDYEKLKLRIPVEAQ---HNLVLST-S--YAA-HKTKIWLV 421 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~-v~l---~~~~~~~~l~~~~~~~~~---~~l~~~~-~--~~~-~~~~vwiv 421 (529)
.+|.|+|| | .||+++|..|..++.. ++. .+++..+-...++..... .+ ++++ + |++ ++++++|+
T Consensus 1 ~KVaviGa-G--~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~-~~i~~~~~y~~~~~aDiVvi 75 (313)
T COG0039 1 MKVAVIGA-G--NVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSD-VKITGDGDYEDLKGADIVVI 75 (313)
T ss_pred CeEEEECC-C--hHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCc-eEEecCCChhhhcCCCEEEE
Confidence 36999999 8 9999999999987776 333 554444433222222111 11 2344 2 666 77777664
No 426
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=84.27 E-value=1.8 Score=44.06 Aligned_cols=75 Identities=20% Similarity=0.211 Sum_probs=47.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhCcccccccee-eec---cccc---------C
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRIPVEAQHNLV-LST---SYAA---------H 414 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~---~~~~l~~~~~~~~~~~l~-~~~---~~~~---------~ 414 (529)
-+.|+++|+.| -||++.+..|.++|++++. .++| ...+||+..|..+-...- .++ ++++ -
T Consensus 5 GKna~vtggag--GIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg 82 (261)
T KOG4169|consen 5 GKNALVTGGAG--GIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG 82 (261)
T ss_pred CceEEEecCCc--hhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence 36788999987 8999999999999999998 3344 444555544443311100 222 2221 3
Q ss_pred cceEEEEcCcCChhh
Q 009674 415 KTKIWLVGDDLTGKE 429 (529)
Q Consensus 415 ~~~vwivg~~~~~~~ 429 (529)
+.||.|-|++|..+.
T Consensus 83 ~iDIlINgAGi~~dk 97 (261)
T KOG4169|consen 83 TIDILINGAGILDDK 97 (261)
T ss_pred ceEEEEcccccccch
Confidence 568888777766543
No 427
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=84.11 E-value=0.99 Score=47.58 Aligned_cols=60 Identities=18% Similarity=0.166 Sum_probs=49.2
Q ss_pred HHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccc
Q 009674 342 AAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH 403 (529)
Q Consensus 342 aavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~ 403 (529)
.....-..|+-...|+++|... -+|.++|.-+.++|-.|++ |++++++++++++.-.++.
T Consensus 22 ~~~~~~~~~k~~~hi~itggS~--glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~ 83 (331)
T KOG1210|consen 22 DHRSFIVKPKPRRHILITGGSS--GLGLALALECKREGADVTITARSGKKLLEAKAELELLTQV 83 (331)
T ss_pred HHHhhhcccCccceEEEecCcc--hhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhcc
Confidence 3334444566678999999985 8999999999999999998 9999999999997776643
No 428
>PLN00016 RNA-binding protein; Provisional
Probab=83.92 E-value=1 Score=47.47 Aligned_cols=38 Identities=21% Similarity=0.217 Sum_probs=32.4
Q ss_pred cCCCcEEEEe----cccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674 350 PKTTAHVLLR----GTVTANKVANAVASSLCQMGIKVAT--ICKDD 389 (529)
Q Consensus 350 ~~~~~~V~~~----Gatg~~kig~ava~~L~~~~~~v~l--~~~~~ 389 (529)
....++|+|+ |+|| -||+.+++.|.++|.+|+. |+++.
T Consensus 49 ~~~~~~VLVt~~~~GatG--~iG~~lv~~L~~~G~~V~~l~R~~~~ 92 (378)
T PLN00016 49 AVEKKKVLIVNTNSGGHA--FIGFYLAKELVKAGHEVTLFTRGKEP 92 (378)
T ss_pred ccccceEEEEeccCCCce--eEhHHHHHHHHHCCCEEEEEecCCcc
Confidence 3456789999 9999 9999999999999999988 66543
No 429
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=83.91 E-value=2.3 Score=44.30 Aligned_cols=63 Identities=21% Similarity=0.274 Sum_probs=42.2
Q ss_pred EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHH----HHhhCccccccceeeeccccc-CcceEEEE
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEK----LKLRIPVEAQHNLVLSTSYAA-HKTKIWLV 421 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~----l~~~~~~~~~~~l~~~~~~~~-~~~~vwiv 421 (529)
+|.++|+ | .||.++|..|+++|+ ++.+ +++++.+. +....+.... ..+..+++++ ++++++|+
T Consensus 2 kI~IIGa-G--~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~-~~i~~~d~~~l~~aDiVii 73 (308)
T cd05292 2 KVAIVGA-G--FVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKP-VRIYAGDYADCKGADVVVI 73 (308)
T ss_pred EEEEECC-C--HHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCC-eEEeeCCHHHhCCCCEEEE
Confidence 5899999 6 999999999999994 6666 67766654 4433222211 2234347766 88888664
No 430
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=83.68 E-value=1.1 Score=52.13 Aligned_cols=39 Identities=10% Similarity=0.140 Sum_probs=33.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 393 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l 393 (529)
.-++|.|+||- -+|+.||..+++.|++|++ ++++.+++.
T Consensus 334 ~i~~v~ViGaG---~MG~gIA~~~a~~G~~V~l~d~~~~~l~~~ 374 (737)
T TIGR02441 334 PVKTLAVLGAG---LMGAGIAQVSVDKGLKTVLKDATPAGLDRG 374 (737)
T ss_pred cccEEEEECCC---HhHHHHHHHHHhCCCcEEEecCCHHHHHHH
Confidence 45689999994 9999999999999999999 677766653
No 431
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=83.67 E-value=2.1 Score=42.84 Aligned_cols=40 Identities=15% Similarity=0.178 Sum_probs=33.2
Q ss_pred EEEEecccCchhhHHHHHHHHhccC---cEEEe--cchhhHHHHHhhC
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMG---IKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~---~~v~l--~~~~~~~~l~~~~ 397 (529)
+|.++|. | .+|+++|+.|.+.| .+|.+ |++++.+.++++.
T Consensus 4 ~I~iIG~-G--~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~ 48 (267)
T PRK11880 4 KIGFIGG-G--NMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEY 48 (267)
T ss_pred EEEEEec-h--HHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhc
Confidence 6899997 5 99999999999888 56666 8888888887753
No 432
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=83.63 E-value=3.6 Score=44.46 Aligned_cols=84 Identities=17% Similarity=0.102 Sum_probs=59.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcC------
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD------ 423 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~------ 423 (529)
..++|-++|.- .||+++|+.|..-|.+|+..+..+-+ + +.. ....++++ +.++|+++--
T Consensus 115 ~gktvGIIG~G---~IG~~vA~~l~a~G~~V~~~dp~~~~----~---~~~---~~~~~L~ell~~sDiI~lh~PLt~~g 181 (378)
T PRK15438 115 HDRTVGIVGVG---NVGRRLQARLEALGIKTLLCDPPRAD----R---GDE---GDFRSLDELVQEADILTFHTPLFKDG 181 (378)
T ss_pred CCCEEEEECcC---HHHHHHHHHHHHCCCEEEEECCcccc----c---ccc---cccCCHHHHHhhCCEEEEeCCCCCCc
Confidence 57899999985 99999999999999999993322111 0 110 11235554 5677755222
Q ss_pred ------cCChhhhhcCCCCceeecccc---cCcc
Q 009674 424 ------DLTGKEQARAPKGTIFIPYTQ---IPPR 448 (529)
Q Consensus 424 ------~~~~~~q~~a~~G~~f~~~~~---~~~~ 448 (529)
-++.++..+|++|+++|..+| |+.+
T Consensus 182 ~~~T~~li~~~~l~~mk~gailIN~aRG~vVDe~ 215 (378)
T PRK15438 182 PYKTLHLADEKLIRSLKPGAILINACRGAVVDNT 215 (378)
T ss_pred ccccccccCHHHHhcCCCCcEEEECCCchhcCHH
Confidence 366788899999999999999 5554
No 433
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=83.42 E-value=5.3 Score=43.40 Aligned_cols=90 Identities=14% Similarity=0.093 Sum_probs=59.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc-------------ccceeeecccccCcceE
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA-------------QHNLVLSTSYAAHKTKI 418 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~-------------~~~l~~~~~~~~~~~~v 418 (529)
.+|.++|.. -+|...|..|+++|.+|+. +++++.+.+++...... ...+...+++ +++++
T Consensus 4 ~kI~VIGlG---~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~--~~aDv 78 (415)
T PRK11064 4 ETISVIGLG---YIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTP--EPADA 78 (415)
T ss_pred cEEEEECcc---hhhHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeeccc--ccCCE
Confidence 579999985 9999999999999999998 88999998875522111 1111111222 24444
Q ss_pred --EEEcCcCCh-------------hh-hhcCCCCceeecccccCcc
Q 009674 419 --WLVGDDLTG-------------KE-QARAPKGTIFIPYTQIPPR 448 (529)
Q Consensus 419 --wivg~~~~~-------------~~-q~~a~~G~~f~~~~~~~~~ 448 (529)
..|+...++ ++ ...+++|++++.-|-+||.
T Consensus 79 vii~vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pg 124 (415)
T PRK11064 79 FLIAVPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSPVG 124 (415)
T ss_pred EEEEcCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 346654211 11 2236899999999988886
No 434
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=83.29 E-value=1.3 Score=39.48 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=26.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchh
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKD 388 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~ 388 (529)
+.++++|++| -||+++++.|+++|. .|.+ |+++
T Consensus 1 ~~~li~Ga~~--~iG~~~~~~l~~~g~~~v~~~~r~~~ 36 (180)
T smart00822 1 GTYLITGGLG--GLGLELARWLAERGARHLVLLSRSGP 36 (180)
T ss_pred CEEEEEcCCC--hHHHHHHHHHHHhhCCeEEEEeCCCC
Confidence 3689999998 999999999999886 4555 5444
No 435
>PRK06223 malate dehydrogenase; Reviewed
Probab=83.29 E-value=2.5 Score=43.45 Aligned_cols=65 Identities=17% Similarity=0.251 Sum_probs=41.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhh----Cccccccceeee-ccccc-CcceEEEE
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLR----IPVEAQHNLVLS-TSYAA-HKTKIWLV 421 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~----~~~~~~~~l~~~-~~~~~-~~~~vwiv 421 (529)
.+|.++|+ | .+|+++|..|++.|. .+.+ +++++.+....+ ........-+.. +++++ ++++++|+
T Consensus 3 ~KI~VIGa-G--~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~~~~~aDiVii 76 (307)
T PRK06223 3 KKISIIGA-G--NVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYEDIAGSDVVVI 76 (307)
T ss_pred CEEEEECC-C--HHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHHHHCCCCEEEE
Confidence 47999999 7 999999999998875 7777 666655433222 111111111333 36766 88888663
No 436
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=83.15 E-value=3.1 Score=42.79 Aligned_cols=99 Identities=14% Similarity=0.111 Sum_probs=62.1
Q ss_pred hHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec---cc-
Q 009674 340 LAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST---SY- 411 (529)
Q Consensus 340 ltaavv~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~---~~- 411 (529)
+||+..+... .+....|++.|++| -||.++++.+..+|.+|.. ++.++.+.++++++.+. .+..+ ++
T Consensus 137 ~tA~~~l~~~~~~~~g~~VlI~Ga~G--~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~---vi~~~~~~~~~ 211 (338)
T cd08295 137 LTAYAGFYEVCKPKKGETVFVSAASG--AVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDD---AFNYKEEPDLD 211 (338)
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCce---eEEcCCcccHH
Confidence 5555555332 23457899999998 9999999988899999876 78889888887554322 11111 11
Q ss_pred ---cc---CcceEEE--EcCcCChhhhhcCCCCceeeccc
Q 009674 412 ---AA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT 443 (529)
Q Consensus 412 ---~~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~ 443 (529)
++ ...++++ +|....++-.....+|-.++.+.
T Consensus 212 ~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G 251 (338)
T cd08295 212 AALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACG 251 (338)
T ss_pred HHHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEec
Confidence 11 2345555 34333334445566777777766
No 437
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=83.07 E-value=14 Score=39.22 Aligned_cols=167 Identities=20% Similarity=0.219 Sum_probs=100.0
Q ss_pred HHHHHHHHHHcCCcEEEecc----cccccc-------cccCCceeeecCCC---------CcceeeecCCh---------
Q 009674 289 IEEAILEADAKGVKVISLGL----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS--------- 339 (529)
Q Consensus 289 I~~Ai~~A~k~G~kv~~LG~----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns--------- 339 (529)
-|.|+ .++|.+++.|+. +.++|. |+...-+.+.|+|+ ..+++|+.|.+
T Consensus 63 Fe~A~---~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~y~D~iviR~~~~~~~~~~a~~s~vPVINa~~~~~HPtQaL 139 (332)
T PRK04284 63 FEVAA---YDQGAHVTYLGPTGSQMGKKESTKDTARVLGGMYDGIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVL 139 (332)
T ss_pred HHHHH---HHcCCeEEEcCCccccCCCCcCHHHHHHHHHHhCCEEEEecCchHHHHHHHHhCCCCEEECCCCCCChHHHH
Confidence 45554 569999999865 334554 45566677888877 35688988754
Q ss_pred hHHHHHHhcC-c-CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhh-------HHHHHhhCccccccceeeec-
Q 009674 340 LAAAVVVNSL-P-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD-------YEKLKLRIPVEAQHNLVLST- 409 (529)
Q Consensus 340 ltaavv~~~i-~-~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~-------~~~l~~~~~~~~~~~l~~~~- 409 (529)
+=..++.+.. . -+..+|+++|... +.+++..+..|++-|.++.+-..+. .++.++ ...+.+.. +.++
T Consensus 140 ~Dl~Ti~e~~~g~l~g~kia~vGD~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~-~~~~~g~~-~~~~~ 216 (332)
T PRK04284 140 ADFLTAKEHLKKPYKDIKFTYVGDGR-NNVANALMQGAAIMGMDFHLVCPKELNPDDELLNKCKE-IAAETGGK-ITITD 216 (332)
T ss_pred HHHHHHHHHhcCCcCCcEEEEecCCC-cchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHH-HHHHcCCe-EEEEc
Confidence 1246666663 2 2457999999862 3789999999999999999933332 222221 11223333 3344
Q ss_pred cccc--CcceEEEEcCcCChhhhhc--CCCCceeecccccCcc---CCC-CCce-eecCCcc
Q 009674 410 SYAA--HKTKIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR---KLR-KDCF-YHSTPAM 462 (529)
Q Consensus 410 ~~~~--~~~~vwivg~~~~~~~q~~--a~~G~~f~~~~~~~~~---~~R-~dc~-y~~~~a~ 462 (529)
++++ ++++|+..+.|.+..+... ...-..|-+| |++++ ..+ +|+. .|.+|+.
T Consensus 217 d~~ea~~~aDvvy~~~w~~~~~~~~~~~~~~~~~~~y-~v~~e~l~~a~~~~~ivmHplP~~ 277 (332)
T PRK04284 217 DIDEGVKGSDVIYTDVWVSMGEPDEVWEERIKLLKPY-QVNKEMMKKTGNPNAIFEHCLPSF 277 (332)
T ss_pred CHHHHhCCCCEEEECCcccCccchhhHHHHHHhccCC-cCCHHHHhhcCCCCcEEECCCCCC
Confidence 7764 7888877765543221000 0000223344 38877 345 4776 5778864
No 438
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=82.90 E-value=1.8 Score=50.40 Aligned_cols=38 Identities=13% Similarity=0.184 Sum_probs=32.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 392 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~ 392 (529)
+-++|.|+||- -+|+.||..+++.|.+|++ .+++.+++
T Consensus 312 ~i~~v~ViGaG---~mG~gIA~~~a~~G~~V~l~d~~~~~l~~ 351 (715)
T PRK11730 312 PVKQAAVLGAG---IMGGGIAYQSASKGVPVIMKDINQKALDL 351 (715)
T ss_pred ccceEEEECCc---hhHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence 45689999998 8999999999999999999 67666553
No 439
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=82.75 E-value=6 Score=43.53 Aligned_cols=166 Identities=17% Similarity=0.246 Sum_probs=99.1
Q ss_pred HHHHHHHHHHcCCcEEEecc-----cccccc-------cccCCceeeecCCC---------CcceeeecCCh--------
Q 009674 289 IEEAILEADAKGVKVISLGL-----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS-------- 339 (529)
Q Consensus 289 I~~Ai~~A~k~G~kv~~LG~-----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns-------- 339 (529)
-|.|+ .++|..++.|+. +.++|. |+...-+.+.|+|. ..+++|+.+-+
T Consensus 144 FE~A~---~~LGg~~i~l~~~~~ss~~kGESi~DTarvLs~y~D~IviR~~~~~~~~e~A~~s~vPVINAgdg~~~HPtQ 220 (429)
T PRK11891 144 FGAAF---CRLGGSVCDTTGFTFSSMAKGESIYDTSRVMSGYVDALVIRHPEQGSVAEFARATNLPVINGGDGPGEHPSQ 220 (429)
T ss_pred HHHHH---HHcCCeEEEeCCccccCCCCCCCHHHHHHHHHHhCCEEEEeCCchhHHHHHHHhCCCCEEECCCCCCCCcHH
Confidence 45554 489999999954 334454 45667788888876 45789998643
Q ss_pred --hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhcc-CcEEEecchhhHH---HHHhhCccccccceeee
Q 009674 340 --LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYE---KLKLRIPVEAQHNLVLS 408 (529)
Q Consensus 340 --ltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l~~~~~~~---~l~~~~~~~~~~~l~~~ 408 (529)
+=..++.+... .+..+|+++|...-+.+++..+..|++. |.++.+-..+.|+ .+.+++. +.+.. +.+
T Consensus 221 aLaDl~Ti~E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~~G~~v~l~~P~~~~~~~~~~~~~~-~~G~~-v~~ 298 (429)
T PRK11891 221 ALLDLYTIQREFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALYRGLKFTLVSPPTLEMPAYIVEQIS-RNGHV-IEQ 298 (429)
T ss_pred HHHHHHHHHHHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHhcCCEEEEECCCccccCHHHHHHHH-hcCCe-EEE
Confidence 22556666542 2357999999972228899999999975 9999883333332 2222211 12333 434
Q ss_pred c-cccc--CcceEEEEcCcCChhhhhcCCCCceeecccccCcc---C-CCCCce-eecCCc
Q 009674 409 T-SYAA--HKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPR---K-LRKDCF-YHSTPA 461 (529)
Q Consensus 409 ~-~~~~--~~~~vwivg~~~~~~~q~~a~~G~~f~~~~~~~~~---~-~R~dc~-y~~~~a 461 (529)
+ ++++ ++++|+...- +..|+......-..+-+| |++.+ . .++||. .|.+|+
T Consensus 299 ~~d~~eav~~ADVVYt~~-~q~er~~~~~~~~~~~~y-~vt~ell~~~ak~dai~MHcLPr 357 (429)
T PRK11891 299 TDDLAAGLRGADVVYATR-IQKERFADESFEGYTPDF-QINQALVDAVCKPDTLIMHPLPR 357 (429)
T ss_pred EcCHHHHhCCCCEEEEcC-chhhcccCHHHHHhccCC-cCCHHHHhCccCCCcEEECCCCC
Confidence 4 7764 8888888744 332222100001123344 38887 3 467877 567774
No 440
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=82.60 E-value=4.3 Score=41.03 Aligned_cols=99 Identities=13% Similarity=0.107 Sum_probs=59.0
Q ss_pred hHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--c---
Q 009674 340 LAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S--- 410 (529)
Q Consensus 340 ltaavv~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~--~--- 410 (529)
+||+..+..+- +....|++.|++| .+|.++++.+.+.|.+|.. +++++.+.+++ ++.. ..+... +
T Consensus 125 ~ta~~~l~~~~~~~~~~~vlI~ga~g--~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~---~v~~~~~~~~~~ 198 (329)
T cd08250 125 LTASIALEEVGEMKSGETVLVTAAAG--GTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS-LGCD---RPINYKTEDLGE 198 (329)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCcc--HHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHH-cCCc---eEEeCCCccHHH
Confidence 44444443331 2356899999998 9999999988899999877 77778777744 4321 111111 1
Q ss_pred -ccc---CcceEEE--EcCcCChhhhhcCCCCceeecccc
Q 009674 411 -YAA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYTQ 444 (529)
Q Consensus 411 -~~~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~~ 444 (529)
+.. +..++++ +|.....+-.+.++++-.|+.+..
T Consensus 199 ~~~~~~~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~ 238 (329)
T cd08250 199 VLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGF 238 (329)
T ss_pred HHHHhcCCCCeEEEECCcHHHHHHHHHHhccCCeEEEEec
Confidence 111 2345555 333333344556777778887763
No 441
>PLN02342 ornithine carbamoyltransferase
Probab=82.55 E-value=19 Score=38.57 Aligned_cols=162 Identities=15% Similarity=0.191 Sum_probs=95.9
Q ss_pred HHHcCCcEEEecccc----ccccc-------ccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 009674 296 ADAKGVKVISLGLLN----QGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 346 (529)
Q Consensus 296 A~k~G~kv~~LG~ln----~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~ 346 (529)
+.++|.+++.|+.=+ ++|.+ ....-+.+.|+|+ ...+.|+.+-+ +=..++.
T Consensus 107 ~~~LGg~~i~l~~~~ss~~kGESl~DTarvLs~y~D~IviR~~~~~~~~~la~~~~vPVINA~~~~~HPtQaLaDl~Ti~ 186 (348)
T PLN02342 107 FFLLGGHALYLGPDDIQLGKREETRDIARVLSRYNDIIMARVFAHQDVLDLAEYSSVPVINGLTDYNHPCQIMADALTII 186 (348)
T ss_pred HHHcCCcEEEeCcccccCCCCcCHHHHHHHHHHhCCEEEEeCCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 578999999996433 44443 3445567778876 24577777643 1134555
Q ss_pred hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHhhCccccc-cceeeec-cccc--CcceE
Q 009674 347 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRIPVEAQ-HNLVLST-SYAA--HKTKI 418 (529)
Q Consensus 347 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~---~l~~~~~~~~~-~~l~~~~-~~~~--~~~~v 418 (529)
+.... +..+|+++|... .+.+..+..|.+-|.++.+-..+.|+ ++.+++. +.+ .. +.++ ++++ ++++|
T Consensus 187 e~~G~l~glkva~vGD~~--nva~Sli~~~~~~G~~v~~~~P~~~~~~~~~~~~a~-~~g~~~-~~~~~d~~eav~~aDV 262 (348)
T PLN02342 187 EHIGRLEGTKVVYVGDGN--NIVHSWLLLAAVLPFHFVCACPKGYEPDAKTVEKAR-AAGISK-IEITNDPAEAVKGADV 262 (348)
T ss_pred HHhCCcCCCEEEEECCCc--hhHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHH-HhCCCc-EEEEcCHHHHhCCCCE
Confidence 54432 457999999975 79999999999999999983333332 1111111 111 12 3344 7764 88899
Q ss_pred EEEcCcCChhhhhc-CCCCceeecccccCcc---CCCCCce-eecCCcc
Q 009674 419 WLVGDDLTGKEQAR-APKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM 462 (529)
Q Consensus 419 wivg~~~~~~~q~~-a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a~ 462 (529)
+..+.|.+..+..+ ...-..|-+| |++.+ ..++||. -|.+|+.
T Consensus 263 vy~~~W~s~~~~e~~~~~~~~~~~y-~vt~ell~~ak~~aivMHpLP~~ 310 (348)
T PLN02342 263 VYTDVWASMGQKEEAEKRKKAFQGF-QVNEALMKLAGPQAYFMHCLPAE 310 (348)
T ss_pred EEECCccccccchhhHHHHHhccCC-ccCHHHHhccCCCcEEeCCCCcC
Confidence 88876554211100 0011123445 48887 5568886 4777764
No 442
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=82.36 E-value=1.5 Score=44.91 Aligned_cols=26 Identities=19% Similarity=0.305 Sum_probs=23.0
Q ss_pred EEecccCchhhHHHHHHHHhccC--cEEEe
Q 009674 357 LLRGTVTANKVANAVASSLCQMG--IKVAT 384 (529)
Q Consensus 357 ~~~Gatg~~kig~ava~~L~~~~--~~v~l 384 (529)
+|+|++| =||+.+++.|.++| .+|..
T Consensus 1 LVTGgsG--flG~~iv~~Ll~~g~~~~Vr~ 28 (280)
T PF01073_consen 1 LVTGGSG--FLGSHIVRQLLERGYIYEVRV 28 (280)
T ss_pred CEEcCCc--HHHHHHHHHHHHCCCceEEEE
Confidence 5899999 99999999999999 56655
No 443
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=82.28 E-value=1.6 Score=44.07 Aligned_cols=64 Identities=17% Similarity=0.268 Sum_probs=42.5
Q ss_pred EEEecccCchhhHHHHHHHHhccC----cEEEe--cchhhHHHHHhhCcccccc--c-eeeec-c-ccc-CcceEEEE
Q 009674 356 VLLRGTVTANKVANAVASSLCQMG----IKVAT--ICKDDYEKLKLRIPVEAQH--N-LVLST-S-YAA-HKTKIWLV 421 (529)
Q Consensus 356 V~~~Gatg~~kig~ava~~L~~~~----~~v~l--~~~~~~~~l~~~~~~~~~~--~-l~~~~-~-~~~-~~~~vwiv 421 (529)
|.++||.| .+|+.+|..|+..| .++.| +++++++....++..-... + -+..+ + +++ ++++++|.
T Consensus 1 I~IIGagG--~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~ 76 (263)
T cd00650 1 IAVIGAGG--NVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVII 76 (263)
T ss_pred CEEECCCC--hHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEE
Confidence 57899987 89999999999888 67887 6666666555543221111 1 12344 5 445 88888774
No 444
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=82.22 E-value=2.8 Score=44.53 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=28.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
...|+|+|+.| =||+.++..|-++|..|+.
T Consensus 2 ~~~VLVtGgaG--yiGsht~l~L~~~gy~v~~ 31 (343)
T KOG1371|consen 2 GKHVLVTGGAG--YIGSHTVLALLKRGYGVVI 31 (343)
T ss_pred CcEEEEecCCc--ceehHHHHHHHhCCCcEEE
Confidence 36899999999 9999999999999999999
No 445
>PLN02306 hydroxypyruvate reductase
Probab=82.22 E-value=3 Score=45.11 Aligned_cols=94 Identities=11% Similarity=0.111 Sum_probs=59.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEe--cch-hhHHHHHhhCcc----ccc--cceeeeccccc--CcceEE
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT--ICK-DDYEKLKLRIPV----EAQ--HNLVLSTSYAA--HKTKIW 419 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~l--~~~-~~~~~l~~~~~~----~~~--~~l~~~~~~~~--~~~~vw 419 (529)
..++|-++|.- .||+++|+.|+ --|.+|+. ++. ++.+......+. ... .......++++ +.+|++
T Consensus 164 ~gktvGIiG~G---~IG~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDiV 240 (386)
T PLN02306 164 KGQTVGVIGAG---RIGSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADVI 240 (386)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCEE
Confidence 45788999976 99999999997 78999987 222 122211111110 000 00001236665 677776
Q ss_pred EE--------cCcCChhhhhcCCCCceeecccc---cCcc
Q 009674 420 LV--------GDDLTGKEQARAPKGTIFIPYTQ---IPPR 448 (529)
Q Consensus 420 iv--------g~~~~~~~q~~a~~G~~f~~~~~---~~~~ 448 (529)
++ -..|+.++..+|++|+.||-++| |+.+
T Consensus 241 ~lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~lVDe~ 280 (386)
T PLN02306 241 SLHPVLDKTTYHLINKERLALMKKEAVLVNASRGPVIDEV 280 (386)
T ss_pred EEeCCCChhhhhhcCHHHHHhCCCCeEEEECCCccccCHH
Confidence 63 23577888999999999999999 5554
No 446
>PLN02602 lactate dehydrogenase
Probab=82.07 E-value=1.3 Score=47.14 Aligned_cols=64 Identities=22% Similarity=0.339 Sum_probs=41.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcE--EEe--cchhhHHHHHhhCcccc----ccceeee-ccccc-CcceEEEE
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIK--VAT--ICKDDYEKLKLRIPVEA----QHNLVLS-TSYAA-HKTKIWLV 421 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~--v~l--~~~~~~~~l~~~~~~~~----~~~l~~~-~~~~~-~~~~vwiv 421 (529)
.+|.++|+ | .||+++|..|+.+++. +.| .++++.+-...++.... ... +.. ++|++ ++++|+|+
T Consensus 38 ~KI~IIGa-G--~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~~dy~~~~daDiVVi 111 (350)
T PLN02602 38 TKVSVVGV-G--NVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILASTDYAVTAGSDLCIV 111 (350)
T ss_pred CEEEEECC-C--HHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeCCCHHHhCCCCEEEE
Confidence 69999997 7 9999999999976763 444 56665554433322211 112 233 36776 88888775
No 447
>KOG2380 consensus Prephenate dehydrogenase (NADP+) [Amino acid transport and metabolism]
Probab=82.02 E-value=1.1 Score=47.93 Aligned_cols=140 Identities=19% Similarity=0.237 Sum_probs=88.8
Q ss_pred eeeecCCCCcceeeecCChhHHHHHH-hcCcC--CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhC
Q 009674 321 IYLERQPNKLKIKVVDGSSLAAAVVV-NSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRI 397 (529)
Q Consensus 321 ~~~~k~p~~L~irvv~Gnsltaavv~-~~i~~--~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~ 397 (529)
-+..--|.-|++|-.|--+.+-+.+. +++.+ .+.+|.++|=. +.|+-.|..|.+.|-.+..-++++|++++++.
T Consensus 17 t~~~~~p~~~~~~a~~~~~i~d~~~~~~s~~~~k~tl~IaIIGfG---nmGqflAetli~aGh~li~hsRsdyssaa~~y 93 (480)
T KOG2380|consen 17 TFLISPPRSLRIRAIDAAQIFDYMVSEDSIEQWKATLVIAIIGFG---NMGQFLAETLIDAGHGLICHSRSDYSSAAEKY 93 (480)
T ss_pred ceeccCcHHHHHHhhhhhhhhhcccCcchhhhcccceEEEEEecC---cHHHHHHHHHHhcCceeEecCcchhHHHHHHh
Confidence 33344444355666664444444333 22332 46688888865 89999999999999999996666799999997
Q ss_pred ccccccceeeecccccCcceEEEEcC-cCChhh------hhcCCCCceeecccc--cCcc-----CCCCCceeecCCccc
Q 009674 398 PVEAQHNLVLSTSYAAHKTKIWLVGD-DLTGKE------QARAPKGTIFIPYTQ--IPPR-----KLRKDCFYHSTPAMI 463 (529)
Q Consensus 398 ~~~~~~~l~~~~~~~~~~~~vwivg~-~~~~~~------q~~a~~G~~f~~~~~--~~~~-----~~R~dc~y~~~~a~~ 463 (529)
+...=.+ ..|+-++..++++.-. .++-|. -.+...||+|.++.. -|++ -+-+||-.+.+-.|-
T Consensus 94 g~~~ft~---lhdlcerhpDvvLlctsilsiekilatypfqrlrrgtlfvdvlSvKefek~lfekYLPkdfDIlctHpmf 170 (480)
T KOG2380|consen 94 GSAKFTL---LHDLCERHPDVVLLCTSILSIEKILATYPFQRLRRGTLFVDVLSVKEFEKELFEKYLPKDFDILCTHPMF 170 (480)
T ss_pred ccccccc---HHHHHhcCCCEEEEEehhhhHHHHHHhcCchhhccceeEeeeeecchhHHHHHHHhCccccceEeecCCc
Confidence 7766222 2232236667766221 111111 113578999998765 2333 234999999999988
Q ss_pred cCC
Q 009674 464 IPP 466 (529)
Q Consensus 464 ~P~ 466 (529)
=|+
T Consensus 171 GPk 173 (480)
T KOG2380|consen 171 GPK 173 (480)
T ss_pred CCC
Confidence 777
No 448
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=81.83 E-value=1.7 Score=45.28 Aligned_cols=28 Identities=21% Similarity=0.270 Sum_probs=25.1
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcE--EEe
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIK--VAT 384 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~--v~l 384 (529)
+|.++|||| .+|+++|..|+..|.. |.+
T Consensus 2 kI~IiGatG--~vG~~~a~~l~~~g~~~~v~l 31 (309)
T cd05294 2 KVSIIGASG--RVGSATALLLAKEDVVKEINL 31 (309)
T ss_pred EEEEECCCC--hHHHHHHHHHHhCCCCCEEEE
Confidence 689999999 9999999999988876 666
No 449
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=81.77 E-value=3.3 Score=41.49 Aligned_cols=86 Identities=15% Similarity=0.227 Sum_probs=54.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec------ccc---c-CcceEE
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST------SYA---A-HKTKIW 419 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~------~~~---~-~~~~vw 419 (529)
....|++.|++| .||.++++.+..+|.++.. ++.++.+.++ +++.. .++... .++ . +..+++
T Consensus 138 ~~~~vlI~g~~~--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~v 211 (323)
T cd05282 138 PGDWVIQNAANS--AVGRMLIQLAKLLGFKTINVVRRDEQVEELK-ALGAD---EVIDSSPEDLAQRVKEATGGAGARLA 211 (323)
T ss_pred CCCEEEEccccc--HHHHHHHHHHHHCCCeEEEEecChHHHHHHH-hcCCC---EEecccchhHHHHHHHHhcCCCceEE
Confidence 457899999998 9999999999999999887 7778888774 33321 111111 111 1 345666
Q ss_pred E--EcCcCChhhhhcCCCCceeeccc
Q 009674 420 L--VGDDLTGKEQARAPKGTIFIPYT 443 (529)
Q Consensus 420 i--vg~~~~~~~q~~a~~G~~f~~~~ 443 (529)
+ +|.....+-.+.++++-+|+.+.
T Consensus 212 l~~~g~~~~~~~~~~l~~~g~~v~~g 237 (323)
T cd05282 212 LDAVGGESATRLARSLRPGGTLVNYG 237 (323)
T ss_pred EECCCCHHHHHHHHhhCCCCEEEEEc
Confidence 6 33333333444666777777665
No 450
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=81.58 E-value=9.3 Score=40.08 Aligned_cols=156 Identities=15% Similarity=0.245 Sum_probs=99.3
Q ss_pred HHHHHHHHHHcCCcEEEecc----cccccc-------cccC-CceeeecCCC---------CcceeeecCCh--h-----
Q 009674 289 IEEAILEADAKGVKVISLGL----LNQGEE-------LNRN-GEIYLERQPN---------KLKIKVVDGSS--L----- 340 (529)
Q Consensus 289 I~~Ai~~A~k~G~kv~~LG~----ln~~e~-------ln~~-g~~~~~k~p~---------~L~irvv~Gns--l----- 340 (529)
.|.|| .++|.+++.|+. +.++|. |.+. .-+.+.|+|+ ..+|+|+.+-+ .
T Consensus 63 Fe~A~---~~LGg~~i~l~~~~~~~~kgEs~~Dta~vls~y~~D~iv~R~~~~~~~~~~a~~~~vPVINa~~g~~~HPtQ 139 (305)
T PRK00856 63 FELAA---KRLGADVINFSASTSSVSKGETLADTIRTLSAMGADAIVIRHPQSGAARLLAESSDVPVINAGDGSHQHPTQ 139 (305)
T ss_pred HHHHH---HHcCCcEEEeCCCcccCCCCcCHHHHHHHHHhcCCCEEEEeCCChHHHHHHHHHCCCCEEECCCCCCCCcHH
Confidence 45554 478999999975 444444 4555 6677888877 35688887732 1
Q ss_pred ---HHHHHHhcCcC-CCcEEEEeccc--CchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeec-ccc-
Q 009674 341 ---AAAVVVNSLPK-TTAHVLLRGTV--TANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLST-SYA- 412 (529)
Q Consensus 341 ---taavv~~~i~~-~~~~V~~~Gat--g~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~-~~~- 412 (529)
=+.++.+.... +..+|+++|.. + -+++..+.++++-|..+.+-..+.|+. +++.. ..++ +.+
T Consensus 140 ~LaDl~Ti~e~~G~l~g~kv~~vGD~~~~--~v~~Sl~~~~~~~g~~~~~~~P~~~~~--~~~~~------~~~~~d~~e 209 (305)
T PRK00856 140 ALLDLLTIREEFGRLEGLKVAIVGDIKHS--RVARSNIQALTRLGAEVRLIAPPTLLP--EGMPE------YGVHTDLDE 209 (305)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECCCCCC--cHHHHHHHHHHHcCCEEEEECCcccCc--ccccc------eEEECCHHH
Confidence 24566665432 45799999986 5 889999999999999999966665531 01111 1344 776
Q ss_pred c-CcceEEEEcCcCCh-------hhhhcCCCCceeecccccCcc---CCCCCcee-ecCCccc
Q 009674 413 A-HKTKIWLVGDDLTG-------KEQARAPKGTIFIPYTQIPPR---KLRKDCFY-HSTPAMI 463 (529)
Q Consensus 413 ~-~~~~vwivg~~~~~-------~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y-~~~~a~~ 463 (529)
+ ++++|+....+-++ ++.++..+ +| |++.+ ..|+||.+ |.+|+.+
T Consensus 210 a~~~aDvvyt~~~q~e~~~~~~~~~~~~~~~-----~y-~v~~~ll~~a~~~~~~mHcLPa~R 266 (305)
T PRK00856 210 VIEDADVVMMLRVQKERMDGGLLPSYEEYKR-----SY-GLTAERLALAKPDAIVMHPGPVNR 266 (305)
T ss_pred HhCCCCEEEECCcccccccccchHHHHHHhc-----cC-ccCHHHHhhcCCCCEEECCCCCCC
Confidence 4 88888777443211 11222222 33 48887 55688874 8888643
No 451
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=81.52 E-value=4.8 Score=41.45 Aligned_cols=102 Identities=14% Similarity=0.038 Sum_probs=65.0
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--C---cceEEE--EcCc-
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--H---KTKIWL--VGDD- 424 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~---~~~vwi--vg~~- 424 (529)
+|.++|.- .+|+++|+.|.+.|.+|.+ |++++.+.+++. +... ..+.++ + ++++++ +-+.
T Consensus 2 ~Ig~IGlG---~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~-g~~~------~~~~~e~~~~~~~~dvvi~~v~~~~ 71 (301)
T PRK09599 2 QLGMIGLG---RMGGNMARRLLRGGHEVVGYDRNPEAVEALAEE-GATG------ADSLEELVAKLPAPRVVWLMVPAGE 71 (301)
T ss_pred EEEEEccc---HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-CCee------cCCHHHHHhhcCCCCEEEEEecCCc
Confidence 57888854 9999999999999999988 888888887553 2111 113332 1 244433 3221
Q ss_pred -CC---hhhhhcCCCCceeecccccCcc-------CCC-CCceeecCCccccCC
Q 009674 425 -LT---GKEQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIPP 466 (529)
Q Consensus 425 -~~---~~~q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P~ 466 (529)
.. ++-...+++|.++++.+..+|. .++ +.+.|.+-|.+--|.
T Consensus 72 ~~~~v~~~l~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~~dapvsG~~~ 125 (301)
T PRK09599 72 ITDATIDELAPLLSPGDIVIDGGNSYYKDDIRRAELLAEKGIHFVDVGTSGGVW 125 (301)
T ss_pred HHHHHHHHHHhhCCCCCEEEeCCCCChhHHHHHHHHHHHcCCEEEeCCCCcCHH
Confidence 11 1112346789999999987775 122 567788877665443
No 452
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=81.48 E-value=1.5 Score=43.99 Aligned_cols=28 Identities=18% Similarity=0.328 Sum_probs=26.3
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
+|+|+|+|| .||+++++.|.++|.+|.+
T Consensus 1 kvlV~GatG--~iG~~l~~~l~~~g~~V~~ 28 (328)
T TIGR01179 1 KILVTGGAG--YIGSHTVRQLLESGHEVVV 28 (328)
T ss_pred CEEEeCCCC--HHHHHHHHHHHhCCCeEEE
Confidence 489999999 9999999999999999987
No 453
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=81.41 E-value=3 Score=36.12 Aligned_cols=39 Identities=23% Similarity=0.285 Sum_probs=32.9
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674 356 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 397 (529)
Q Consensus 356 V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 397 (529)
|+++|.. .+|+.+++.|.+.+.+|++ +++++.++++++-
T Consensus 1 vvI~G~g---~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~ 41 (116)
T PF02254_consen 1 VVIIGYG---RIGREIAEQLKEGGIDVVVIDRDPERVEELREEG 41 (116)
T ss_dssp EEEES-S---HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT
T ss_pred eEEEcCC---HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc
Confidence 6789987 9999999999998888888 8888888887763
No 454
>PRK06436 glycerate dehydrogenase; Provisional
Probab=81.25 E-value=3 Score=43.58 Aligned_cols=80 Identities=13% Similarity=0.070 Sum_probs=54.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEE--------E
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--------V 421 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--------v 421 (529)
..++|-++|-- .||+++|+.|...|.+|...++... ++ +. . ....++++ +++++++ .
T Consensus 121 ~gktvgIiG~G---~IG~~vA~~l~afG~~V~~~~r~~~----~~---~~--~-~~~~~l~ell~~aDiv~~~lp~t~~T 187 (303)
T PRK06436 121 YNKSLGILGYG---GIGRRVALLAKAFGMNIYAYTRSYV----ND---GI--S-SIYMEPEDIMKKSDFVLISLPLTDET 187 (303)
T ss_pred CCCEEEEECcC---HHHHHHHHHHHHCCCEEEEECCCCc----cc---Cc--c-cccCCHHHHHhhCCEEEECCCCCchh
Confidence 46789999985 9999999988788999988222110 00 00 0 00224554 5666655 2
Q ss_pred cCcCChhhhhcCCCCceeecccc
Q 009674 422 GDDLTGKEQARAPKGTIFIPYTQ 444 (529)
Q Consensus 422 g~~~~~~~q~~a~~G~~f~~~~~ 444 (529)
-..++.+++.+|++|++||.++|
T Consensus 188 ~~li~~~~l~~mk~ga~lIN~sR 210 (303)
T PRK06436 188 RGMINSKMLSLFRKGLAIINVAR 210 (303)
T ss_pred hcCcCHHHHhcCCCCeEEEECCC
Confidence 33567888999999999999999
No 455
>PLN02206 UDP-glucuronate decarboxylase
Probab=81.16 E-value=1.7 Score=47.46 Aligned_cols=30 Identities=20% Similarity=0.215 Sum_probs=28.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
.++|+|+|+|| -||+.+++.|.++|.+|..
T Consensus 119 ~~kILVTGatG--fIGs~Lv~~Ll~~G~~V~~ 148 (442)
T PLN02206 119 GLRVVVTGGAG--FVGSHLVDRLMARGDSVIV 148 (442)
T ss_pred CCEEEEECccc--HHHHHHHHHHHHCcCEEEE
Confidence 46899999999 9999999999999999987
No 456
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=80.99 E-value=3.5 Score=41.88 Aligned_cols=75 Identities=23% Similarity=0.275 Sum_probs=53.1
Q ss_pred HHHHhcCcCCCcEEEEecccCchh--hHHHHHHHHhccCcEEEe-cchhhHHHHHhhCcccc-ccceeeecccc-c-Ccc
Q 009674 343 AVVVNSLPKTTAHVLLRGTVTANK--VANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEA-QHNLVLSTSYA-A-HKT 416 (529)
Q Consensus 343 avv~~~i~~~~~~V~~~Gatg~~k--ig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~~~~-~~~l~~~~~~~-~-~~~ 416 (529)
+..++.++ ..+.+++.|..|.-| ++.|++..||++|+.|+. +-.|-..+||.....+. .. .+. . .++
T Consensus 96 ~~~~~~~~-~~~nl~l~G~~G~GKThLa~Ai~~~l~~~g~sv~f~~~~el~~~Lk~~~~~~~~~~------~l~~~l~~~ 168 (254)
T COG1484 96 ASLVEFFE-RGENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITAPDLLSKLKAAFDEGRLEE------KLLRELKKV 168 (254)
T ss_pred HHHHHHhc-cCCcEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHHHhcCchHH------HHHHHhhcC
Confidence 34445667 777899999876324 899999999999999999 77888888888755432 11 122 1 466
Q ss_pred eEEEEcCc
Q 009674 417 KIWLVGDD 424 (529)
Q Consensus 417 ~vwivg~~ 424 (529)
++.|+||.
T Consensus 169 dlLIiDDl 176 (254)
T COG1484 169 DLLIIDDI 176 (254)
T ss_pred CEEEEecc
Confidence 78787654
No 457
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=80.95 E-value=2.7 Score=43.27 Aligned_cols=62 Identities=16% Similarity=0.247 Sum_probs=38.7
Q ss_pred EEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHH----HhhCcc-ccccceeeec-cccc-CcceEEEE
Q 009674 356 VLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKL----KLRIPV-EAQHNLVLST-SYAA-HKTKIWLV 421 (529)
Q Consensus 356 V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l----~~~~~~-~~~~~l~~~~-~~~~-~~~~vwiv 421 (529)
|.++|| | .+|+.+|..|+.+|. .|.+ +++++.+.. .+.... ..... +..+ ++++ ++++++|+
T Consensus 1 I~IIGa-G--~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~~t~d~~~l~dADiVIi 72 (300)
T cd01339 1 ISIIGA-G--NVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-VTGTNDYEDIAGSDVVVI 72 (300)
T ss_pred CEEECC-C--HHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EEEcCCHHHhCCCCEEEE
Confidence 578999 7 999999999998876 8888 555544322 221111 11112 3333 6776 88877663
No 458
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=80.91 E-value=3.2 Score=43.68 Aligned_cols=99 Identities=10% Similarity=0.142 Sum_probs=64.3
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHh-ccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEEE------
Q 009674 351 KTTAHVLLRGTVTANKVANAVASSLC-QMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------ 421 (529)
Q Consensus 351 ~~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------ 421 (529)
-..++|-++|-- .||+++|+.|. --|.+|...+...-+.-..+.. +...++++ +.+|++++
T Consensus 143 L~gktvGIiG~G---~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~-------~~~~~l~ell~~sDvv~lh~plt~ 212 (323)
T PRK15409 143 VHHKTLGIVGMG---RIGMALAQRAHFGFNMPILYNARRHHKEAEERFN-------ARYCDLDTLLQESDFVCIILPLTD 212 (323)
T ss_pred CCCCEEEEEccc---HHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcC-------cEecCHHHHHHhCCEEEEeCCCCh
Confidence 356789999985 99999999986 7898988722111010001111 11235655 66777553
Q ss_pred --cCcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCceeecC
Q 009674 422 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 459 (529)
Q Consensus 422 --g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 459 (529)
-..++.++..+|++|+.||-++| |+.+ +++ -|++..+-
T Consensus 213 ~T~~li~~~~l~~mk~ga~lIN~aRG~vVde~AL~~AL~~g~i~gAaLDVf~~EP 267 (323)
T PRK15409 213 ETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEP 267 (323)
T ss_pred HHhhccCHHHHhcCCCCeEEEECCCccccCHHHHHHHHHcCCeeEEEeecCCCCC
Confidence 23567789999999999999999 5544 333 57776664
No 459
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=80.88 E-value=3.9 Score=44.09 Aligned_cols=29 Identities=31% Similarity=0.286 Sum_probs=26.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
.+.|+++|+. ++|.++|+.|.++|.+|++
T Consensus 5 ~k~v~iiG~g---~~G~~~A~~l~~~G~~V~~ 33 (450)
T PRK14106 5 GKKVLVVGAG---VSGLALAKFLKKLGAKVIL 33 (450)
T ss_pred CCEEEEECCC---HHHHHHHHHHHHCCCEEEE
Confidence 4689999977 7999999999999999999
No 460
>PRK07201 short chain dehydrogenase; Provisional
Probab=80.87 E-value=4 Score=45.97 Aligned_cols=28 Identities=14% Similarity=0.178 Sum_probs=25.7
Q ss_pred EEEEecccCchhhHHHHHHHHh--ccCcEEEe
Q 009674 355 HVLLRGTVTANKVANAVASSLC--QMGIKVAT 384 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~--~~~~~v~l 384 (529)
+|+|+|+|| -||+.+++.|. ++|.+|..
T Consensus 2 ~ILVTGatG--fIG~~lv~~Ll~~~~g~~V~~ 31 (657)
T PRK07201 2 RYFVTGGTG--FIGRRLVSRLLDRRREATVHV 31 (657)
T ss_pred eEEEeCCcc--HHHHHHHHHHHhcCCCCEEEE
Confidence 599999999 99999999998 68888887
No 461
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=80.84 E-value=2.7 Score=43.62 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=27.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
..+.++++|+...+-||+|+|+.|+++|-+|.+
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv 39 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILV 39 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEE
Confidence 456789999951148999999999999999999
No 462
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=80.76 E-value=2 Score=48.00 Aligned_cols=110 Identities=11% Similarity=0.029 Sum_probs=71.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-Cccccccceeeeccccc-----CcceEEE---
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPVEAQHNLVLSTSYAA-----HKTKIWL--- 420 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~-~~~~~~~~l~~~~~~~~-----~~~~vwi--- 420 (529)
...+|-++|-- ..|+++|+-|.+.|.+|.+ |+.++.+.+.++ ...+. ..+.-..+.++ ++++++|
T Consensus 5 ~~~~IG~IGLG---~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga-~~~~~a~s~~e~v~~l~~~dvIi~~v 80 (493)
T PLN02350 5 ALSRIGLAGLA---VMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGN-LPLYGFKDPEDFVLSIQKPRSVIILV 80 (493)
T ss_pred CCCCEEEEeeH---HHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCC-cccccCCCHHHHHhcCCCCCEEEEEC
Confidence 34578888865 8999999999999999999 889999988774 11111 11111224443 2475544
Q ss_pred -----EcCcCChhhhhcCCCCceeecccccCcc-------CCC-CCceeecCCccccCC
Q 009674 421 -----VGDDLTGKEQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIPP 466 (529)
Q Consensus 421 -----vg~~~~~~~q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P~ 466 (529)
|.+.++ .=...+.+|.++||.+-++|+ +++ +.+.|.+-|+.--|.
T Consensus 81 ~~~~aV~~Vi~-gl~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~Gi~fldapVSGG~~ 138 (493)
T PLN02350 81 KAGAPVDQTIK-ALSEYMEPGDCIIDGGNEWYENTERRIKEAAEKGLLYLGMGVSGGEE 138 (493)
T ss_pred CCcHHHHHHHH-HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeCCCcCCHH
Confidence 223331 113345799999999998776 122 566688888765444
No 463
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=80.74 E-value=2.3 Score=49.26 Aligned_cols=39 Identities=21% Similarity=0.230 Sum_probs=31.5
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHh-ccCcEEEe--cchhhHHH
Q 009674 351 KTTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT--ICKDDYEK 392 (529)
Q Consensus 351 ~~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~l--~~~~~~~~ 392 (529)
+.-++|.|+|| | -+|+.||..++ +.|.+|++ .+++.+++
T Consensus 302 ~~i~~v~ViGa-G--~mG~~iA~~~a~~~G~~V~l~d~~~~~l~~ 343 (699)
T TIGR02440 302 AKIKKVGILGG-G--LMGGGIASVTATKAGIPVRIKDINPQGINN 343 (699)
T ss_pred ccccEEEEECC-c--HHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence 34568999999 4 99999999888 68999999 66665554
No 464
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=80.70 E-value=2.2 Score=44.17 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=29.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHH
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYE 391 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~~~ 391 (529)
++|+|+|+|| =||+.+|+.|.++ |.+|.. |++++..
T Consensus 2 ~~ilVtGatG--fiGs~l~~~L~~~~~~~V~~~~r~~~~~~ 40 (347)
T PRK11908 2 KKVLILGVNG--FIGHHLSKRILETTDWEVYGMDMQTDRLG 40 (347)
T ss_pred cEEEEECCCc--HHHHHHHHHHHhCCCCeEEEEeCcHHHHH
Confidence 3699999999 9999999999865 688886 5555443
No 465
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=80.68 E-value=1 Score=47.29 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=30.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE 391 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~ 391 (529)
-++|.|+||- .+|+.||..++.-|+.|++ ++++.++
T Consensus 3 i~kv~ViGaG---~MG~gIA~~~A~~G~~V~l~D~~~~~~~ 40 (307)
T COG1250 3 IKKVAVIGAG---VMGAGIAAVFALAGYDVVLKDISPEALE 40 (307)
T ss_pred ccEEEEEccc---chhHHHHHHHhhcCCceEEEeCCHHHHH
Confidence 3689999998 9999999999997799999 6655544
No 466
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=80.60 E-value=4.4 Score=40.72 Aligned_cols=42 Identities=19% Similarity=0.168 Sum_probs=35.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 395 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 395 (529)
....|++.|++| .+|.++++.+...|.++.. ++.++.+.+++
T Consensus 162 ~~~~vlI~ga~g--~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 205 (332)
T cd08259 162 KGDTVLVTGAGG--GVGIHAIQLAKALGARVIAVTRSPEKLKILKE 205 (332)
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence 356899999998 9999999999999999877 77777777744
No 467
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=80.57 E-value=2.6 Score=45.74 Aligned_cols=65 Identities=14% Similarity=0.166 Sum_probs=43.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcE------EE----e-cchhhHHHHHhhCcccc---ccceeeec--cccc-Ccc
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIK------VA----T-ICKDDYEKLKLRIPVEA---QHNLVLST--SYAA-HKT 416 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~------v~----l-~~~~~~~~l~~~~~~~~---~~~l~~~~--~~~~-~~~ 416 (529)
-+|.++||+| .||+++|..|+.+++- ++ + +++++.+-...++.... ..+ +.++ ++++ +++
T Consensus 45 ~KV~IIGAaG--~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~-v~i~~~~y~~~kda 121 (387)
T TIGR01757 45 VNVAVSGAAG--MISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLRE-VSIGIDPYEVFEDA 121 (387)
T ss_pred eEEEEECCCc--HHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCc-eEEecCCHHHhCCC
Confidence 4789999999 9999999999977663 33 2 56777665554433322 012 3333 6666 889
Q ss_pred eEEEE
Q 009674 417 KIWLV 421 (529)
Q Consensus 417 ~vwiv 421 (529)
+|+|+
T Consensus 122 DIVVi 126 (387)
T TIGR01757 122 DWALL 126 (387)
T ss_pred CEEEE
Confidence 88664
No 468
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=80.57 E-value=2.2 Score=43.56 Aligned_cols=91 Identities=16% Similarity=0.239 Sum_probs=59.7
Q ss_pred hhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-cccc--CcceEEE--EcC--cCCh-----hh-h
Q 009674 366 KVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA--HKTKIWL--VGD--DLTG-----KE-Q 430 (529)
Q Consensus 366 kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~--~~~~vwi--vg~--~~~~-----~~-q 430 (529)
.+|.++|+.|++.|.+|.+ |++++.+++++. + +..+ +.++ ++++++| +-+ .+.. ++ .
T Consensus 6 ~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-g-------~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~ 77 (288)
T TIGR01692 6 NMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAA-G-------AQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGIL 77 (288)
T ss_pred HhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHc-C-------CeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHh
Confidence 8999999999999999998 888888888654 1 1122 4443 5565544 221 1111 11 2
Q ss_pred hcCCCCceeecccccCccC---C----C-CCceeecCCcccc
Q 009674 431 ARAPKGTIFIPYTQIPPRK---L----R-KDCFYHSTPAMII 464 (529)
Q Consensus 431 ~~a~~G~~f~~~~~~~~~~---~----R-~dc~y~~~~a~~~ 464 (529)
..+++|+++++.|-++|.. + + +...|.+.|.+--
T Consensus 78 ~~~~~g~~vid~st~~p~~~~~~~~~~~~~g~~~vdaPv~Gg 119 (288)
T TIGR01692 78 PKVAKGSLLIDCSTIDPDSARKLAELAAAHGAVFMDAPVSGG 119 (288)
T ss_pred hcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEECCCCCC
Confidence 2568999999999988861 1 1 4566888776543
No 469
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=80.52 E-value=2.2 Score=46.60 Aligned_cols=62 Identities=27% Similarity=0.289 Sum_probs=45.3
Q ss_pred eeeecCChhHHHHHH-hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674 332 IKVVDGSSLAAAVVV-NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 395 (529)
Q Consensus 332 irvv~Gnsltaavv~-~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 395 (529)
++.++|.+--+++=. +.-..+...|+|+|||| ++|+=+.+.|-++|..|.. |++++-+++-.
T Consensus 57 ~~~~~~~~~e~~v~~~~~~~~~~~~VlVvGatG--~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~ 121 (411)
T KOG1203|consen 57 ISPVTGTTSEAEVSPPNNNSKKPTTVLVVGATG--KVGRRIVKILLKRGFSVRALVRDEQKAEDLLG 121 (411)
T ss_pred CCccccccceeeeccCCCCCCCCCeEEEecCCC--chhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence 455555544443321 12233577999999999 9999999999999988887 88888777655
No 470
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=80.47 E-value=3.6 Score=47.11 Aligned_cols=46 Identities=20% Similarity=0.281 Sum_probs=39.5
Q ss_pred cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674 348 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 396 (529)
Q Consensus 348 ~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 396 (529)
++++.+++|.++|.. .+|+.+|+.|.++|+++++ .|+++.++++++
T Consensus 395 ~~~~~~~~vII~G~G---r~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~ 442 (621)
T PRK03562 395 EIDEQQPRVIIAGFG---RFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKF 442 (621)
T ss_pred ccccccCcEEEEecC---hHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhc
Confidence 344456899999998 9999999999999999988 888899988764
No 471
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=80.41 E-value=3.1 Score=43.09 Aligned_cols=29 Identities=21% Similarity=0.314 Sum_probs=25.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
..+|.++| .| .||+.+|+.|.++|..+.+
T Consensus 3 ~~~v~IvG-~G--liG~s~a~~l~~~g~~v~i 31 (279)
T COG0287 3 SMKVGIVG-LG--LMGGSLARALKEAGLVVRI 31 (279)
T ss_pred CcEEEEEC-Cc--hHHHHHHHHHHHcCCeEEE
Confidence 34677777 77 9999999999999999976
No 472
>PTZ00117 malate dehydrogenase; Provisional
Probab=80.40 E-value=3.6 Score=43.14 Aligned_cols=67 Identities=15% Similarity=0.207 Sum_probs=40.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhh---Cccccccc-eeee-ccccc-CcceEEEE
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLR---IPVEAQHN-LVLS-TSYAA-HKTKIWLV 421 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~---~~~~~~~~-l~~~-~~~~~-~~~~vwiv 421 (529)
+..+|.++|| | .||+.+|..|+..| ..+.| .++++.+..... ........ -+.. +++++ ++++++|+
T Consensus 4 ~~~KI~IIGa-G--~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~~l~~ADiVVi 79 (319)
T PTZ00117 4 KRKKISMIGA-G--QIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYEDIKDSDVVVI 79 (319)
T ss_pred CCcEEEEECC-C--HHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHHHhCCCCEEEE
Confidence 4568999998 7 99999999999888 46666 555544321111 11111111 1233 37776 88877663
No 473
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=80.35 E-value=3.5 Score=46.18 Aligned_cols=83 Identities=16% Similarity=0.129 Sum_probs=55.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--------
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------- 421 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------- 421 (529)
..++|.++|-- .||+.+|+.|...|.+|...+...-.+-..+.+.+ ..++++ +.++++++
T Consensus 139 ~gktvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~-------~~~l~ell~~aDiV~l~lP~t~~t 208 (526)
T PRK13581 139 YGKTLGIIGLG---RIGSEVAKRAKAFGMKVIAYDPYISPERAAQLGVE-------LVSLDELLARADFITLHTPLTPET 208 (526)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCE-------EEcHHHHHhhCCEEEEccCCChHh
Confidence 45789999985 99999999999999999882221101001111111 114554 56666542
Q ss_pred cCcCChhhhhcCCCCceeecccc
Q 009674 422 GDDLTGKEQARAPKGTIFIPYTQ 444 (529)
Q Consensus 422 g~~~~~~~q~~a~~G~~f~~~~~ 444 (529)
-..++.+...+||+|++++.++|
T Consensus 209 ~~li~~~~l~~mk~ga~lIN~aR 231 (526)
T PRK13581 209 RGLIGAEELAKMKPGVRIINCAR 231 (526)
T ss_pred hcCcCHHHHhcCCCCeEEEECCC
Confidence 24566788999999999999999
No 474
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=80.30 E-value=4.8 Score=41.16 Aligned_cols=85 Identities=11% Similarity=0.185 Sum_probs=56.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeec--cc----cc---CcceEEE-
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SY----AA---HKTKIWL- 420 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~--~~----~~---~~~~vwi- 420 (529)
..|++.|++| -+|.++++.+...|. +|.. +++++.+.++++++... .+... ++ ++ ...++++
T Consensus 156 ~~VlI~ga~g--~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~---vi~~~~~~~~~~i~~~~~~gvd~vid 230 (345)
T cd08293 156 QTMVVSGAAG--ACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDA---AINYKTDNVAERLRELCPEGVDVYFD 230 (345)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcE---EEECCCCCHHHHHHHHCCCCceEEEE
Confidence 7899999998 999999998888898 6766 78888888887655432 11111 21 11 2346666
Q ss_pred -EcCcCChhhhhcCCCCceeeccc
Q 009674 421 -VGDDLTGKEQARAPKGTIFIPYT 443 (529)
Q Consensus 421 -vg~~~~~~~q~~a~~G~~f~~~~ 443 (529)
+|.....+-...+.+|-.++.+.
T Consensus 231 ~~g~~~~~~~~~~l~~~G~iv~~G 254 (345)
T cd08293 231 NVGGEISDTVISQMNENSHIILCG 254 (345)
T ss_pred CCCcHHHHHHHHHhccCCEEEEEe
Confidence 33322344455667777777765
No 475
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=80.10 E-value=4.4 Score=40.67 Aligned_cols=43 Identities=21% Similarity=0.311 Sum_probs=35.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 398 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 398 (529)
...|++.|++| .+|.++++.+...|.+|.+ +++++.+.++ +++
T Consensus 147 ~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g 191 (325)
T cd05280 147 DGPVLVTGATG--GVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLG 191 (325)
T ss_pred CCEEEEECCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcC
Confidence 45899999998 9999999888899999876 7888888774 444
No 476
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=80.07 E-value=3.8 Score=40.76 Aligned_cols=30 Identities=27% Similarity=0.283 Sum_probs=26.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
..++|++.|- | .||+.+|+.|.++|.+++.
T Consensus 22 ~g~~vaIqGf-G--nVG~~~a~~L~~~G~~vV~ 51 (217)
T cd05211 22 EGLTVAVQGL-G--NVGWGLAKKLAEEGGKVLA 51 (217)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCEEEE
Confidence 4679999996 5 9999999999999887666
No 477
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=80.05 E-value=2.8 Score=43.82 Aligned_cols=64 Identities=16% Similarity=0.251 Sum_probs=40.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccccc----cc-eeeeccccc-CcceEEEE
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQ----HN-LVLSTSYAA-HKTKIWLV 421 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~~~----~~-l~~~~~~~~-~~~~vwiv 421 (529)
+|.++|+ | .||+++|..|+.+++ .+.| .++++.+-....+..... .+ -+...+|++ ++++|+|+
T Consensus 1 Ki~IIGa-G--~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvi 74 (307)
T cd05290 1 KLVVIGA-G--HVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVI 74 (307)
T ss_pred CEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEE
Confidence 4789999 7 999999999997776 3444 566655544333333211 12 123337777 89988774
No 478
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=80.03 E-value=2.5 Score=42.36 Aligned_cols=82 Identities=13% Similarity=0.147 Sum_probs=49.2
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEE---Ee--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCc---
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKV---AT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDD--- 424 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v---~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~--- 424 (529)
+|.++| +| .+|+++++.|.+.|..+ .+ |++++.++++++.+... -..+.++ +++++++..-.
T Consensus 2 ~IgiIG-~G--~mG~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~-----~~~~~~~~~~~aDvVilav~p~~ 73 (258)
T PRK06476 2 KIGFIG-TG--AITEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVR-----IAKDNQAVVDRSDVVFLAVRPQI 73 (258)
T ss_pred eEEEEC-cC--HHHHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCce-----EeCCHHHHHHhCCEEEEEeCHHH
Confidence 478889 55 99999999999877542 34 88888888877653111 0224443 45666442111
Q ss_pred CCh-hhhhcCCCCceeecccc
Q 009674 425 LTG-KEQARAPKGTIFIPYTQ 444 (529)
Q Consensus 425 ~~~-~~q~~a~~G~~f~~~~~ 444 (529)
+.+ -++.+..+|.+++..+-
T Consensus 74 ~~~vl~~l~~~~~~~vis~~a 94 (258)
T PRK06476 74 AEEVLRALRFRPGQTVISVIA 94 (258)
T ss_pred HHHHHHHhccCCCCEEEEECC
Confidence 111 11224567888877664
No 479
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=80.03 E-value=3.1 Score=41.64 Aligned_cols=45 Identities=18% Similarity=0.186 Sum_probs=36.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 399 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 399 (529)
.+-+.++|+.. -||+|||..|+++|.+|.. ++.+.-+.-...++.
T Consensus 14 sk~~~vtGg~s--GIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g 60 (256)
T KOG1200|consen 14 SKVAAVTGGSS--GIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG 60 (256)
T ss_pred cceeEEecCCc--hHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC
Confidence 45667888885 9999999999999999999 666666766666655
No 480
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=79.97 E-value=2.1 Score=46.68 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=28.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
...+|+|+|+|| -||+.+++.|.++|.+|..
T Consensus 119 ~~mkILVTGatG--FIGs~Lv~~Ll~~G~~V~~ 149 (436)
T PLN02166 119 KRLRIVVTGGAG--FVGSHLVDKLIGRGDEVIV 149 (436)
T ss_pred CCCEEEEECCcc--HHHHHHHHHHHHCCCEEEE
Confidence 456899999999 9999999999999999987
No 481
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=79.89 E-value=2.4 Score=43.99 Aligned_cols=63 Identities=17% Similarity=0.301 Sum_probs=41.3
Q ss_pred EEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccccc---cceeeec-cccc-CcceEEEE
Q 009674 356 VLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQ---HNLVLST-SYAA-HKTKIWLV 421 (529)
Q Consensus 356 V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~~~---~~l~~~~-~~~~-~~~~vwiv 421 (529)
|.++|+ | .||+++|..|+.+|+ .+.+ +++++.+.+..++..-.. ...+..+ ++++ ++++++|+
T Consensus 1 i~iiGa-G--~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~~~~l~~aDiVIi 72 (300)
T cd00300 1 ITIIGA-G--NVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDYADAADADIVVI 72 (300)
T ss_pred CEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCCHHHhCCCCEEEE
Confidence 468898 5 899999999998884 4666 667777766655333211 1112333 6666 88888765
No 482
>PLN02572 UDP-sulfoquinovose synthase
Probab=79.74 E-value=1.9 Score=47.06 Aligned_cols=30 Identities=27% Similarity=0.234 Sum_probs=28.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
.++|+|+|++| =||+.+|+.|.++|.+|.+
T Consensus 47 ~k~VLVTGatG--fIGs~Lv~~L~~~G~~V~~ 76 (442)
T PLN02572 47 KKKVMVIGGDG--YCGWATALHLSKRGYEVAI 76 (442)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCCeEEE
Confidence 56799999999 9999999999999999987
No 483
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=79.69 E-value=3 Score=44.21 Aligned_cols=29 Identities=17% Similarity=0.135 Sum_probs=24.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhc-cCcEEEe
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQ-MGIKVAT 384 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~-~~~~v~l 384 (529)
.+|+++|||| .+|+.+.+.|.+ ...++..
T Consensus 4 ~~V~I~GatG--~iG~~l~~~L~~~p~~el~~ 33 (349)
T PRK08664 4 LKVGILGATG--MVGQRFVQLLANHPWFEVTA 33 (349)
T ss_pred cEEEEECCCC--HHHHHHHHHHHcCCCceEEE
Confidence 5799999999 999999999994 4446555
No 484
>PRK07680 late competence protein ComER; Validated
Probab=79.65 E-value=3.6 Score=41.66 Aligned_cols=85 Identities=12% Similarity=0.191 Sum_probs=50.9
Q ss_pred EEEEecccCchhhHHHHHHHHhccCc----EEEe--cchhhHHHHHhhCccccccceeeec-cccc--CcceEEEEcC--
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGI----KVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA--HKTKIWLVGD-- 423 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~----~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~--~~~~vwivg~-- 423 (529)
+|.++|+ | .+|+++++.|.+.|. ++.+ |++++.+.++++.+. +++. +.++ ++++++|+.-
T Consensus 2 ~I~iIG~-G--~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g------~~~~~~~~~~~~~aDiVilav~p 72 (273)
T PRK07680 2 NIGFIGT-G--NMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPG------IHVAKTIEEVISQSDLIFICVKP 72 (273)
T ss_pred EEEEECc-c--HHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCC------eEEECCHHHHHHhCCEEEEecCH
Confidence 4789995 6 999999999998883 5666 888888887665321 1122 4443 5666655311
Q ss_pred -cCCh--hhhh-cCCCCceeecccc-cCcc
Q 009674 424 -DLTG--KEQA-RAPKGTIFIPYTQ-IPPR 448 (529)
Q Consensus 424 -~~~~--~~q~-~a~~G~~f~~~~~-~~~~ 448 (529)
.+.+ ++.. ...+|.++++++- ++.+
T Consensus 73 ~~~~~vl~~l~~~l~~~~~iis~~ag~~~~ 102 (273)
T PRK07680 73 LDIYPLLQKLAPHLTDEHCLVSITSPISVE 102 (273)
T ss_pred HHHHHHHHHHHhhcCCCCEEEEECCCCCHH
Confidence 1111 1111 2346778887765 4433
No 485
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=79.56 E-value=4.8 Score=40.62 Aligned_cols=88 Identities=14% Similarity=0.165 Sum_probs=55.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--cc----cc---CcceEEE-
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SY----AA---HKTKIWL- 420 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~--~~----~~---~~~~vwi- 420 (529)
...|++.|++| .+|.++++.+.+.|.++.. ++.++.+.+++.++... .+... ++ .+ ...++++
T Consensus 146 ~~~vlI~g~~g--~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~v~~~~~~~~d~vi~ 220 (329)
T cd05288 146 GETVVVSAAAG--AVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDA---AINYKTPDLAEALKEAAPDGIDVYFD 220 (329)
T ss_pred CCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCce---EEecCChhHHHHHHHhccCCceEEEE
Confidence 47899999988 9999999999999999877 67788887776444311 11111 11 11 2345555
Q ss_pred -EcCcCChhhhhcCCCCceeeccccc
Q 009674 421 -VGDDLTGKEQARAPKGTIFIPYTQI 445 (529)
Q Consensus 421 -vg~~~~~~~q~~a~~G~~f~~~~~~ 445 (529)
+|...-.+-...++++-.|+.+...
T Consensus 221 ~~g~~~~~~~~~~l~~~G~~v~~g~~ 246 (329)
T cd05288 221 NVGGEILDAALTLLNKGGRIALCGAI 246 (329)
T ss_pred cchHHHHHHHHHhcCCCceEEEEeec
Confidence 3332223334456677778877643
No 486
>PRK08192 aspartate carbamoyltransferase; Provisional
Probab=79.42 E-value=6.8 Score=41.69 Aligned_cols=162 Identities=15% Similarity=0.320 Sum_probs=95.4
Q ss_pred HHHcCCcEEE-ecc----cccccc-------cccCCceeeecCCC---------CcceeeecCCh----------hHHHH
Q 009674 296 ADAKGVKVIS-LGL----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS----------LAAAV 344 (529)
Q Consensus 296 A~k~G~kv~~-LG~----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns----------ltaav 344 (529)
+.++|.+++. ++. +.++|. |++..-+.+.|+|+ ..+|+|+.|-| +=..+
T Consensus 66 ~~~LGg~~i~~~~~~~s~~~kgEsl~Dtarvls~y~D~IviR~~~~~~~~~~a~~~~vPVINa~~g~~~HPtQaLaDl~T 145 (338)
T PRK08192 66 FNLLGGHVRETTGMASSSLSKGESLYDTARVLSTYSDVIAMRHPDAGSVKEFAEGSRVPVINGGDGSNEHPTQALLDLFT 145 (338)
T ss_pred HHHcCCcEEeecCcccccCCCCCCHHHHHHHHHHcCCEEEEeCCchhHHHHHHHhCCCCEEECCCCCCCCcHHHHHHHHH
Confidence 5689999997 452 445544 45667788889987 24588887533 13567
Q ss_pred HHhcC-----cCCCcEEEEecccCchhhHHHHHHHHh-ccCcEEEecchhhHH---HHHhhCccccccceeeec-cccc-
Q 009674 345 VVNSL-----PKTTAHVLLRGTVTANKVANAVASSLC-QMGIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYAA- 413 (529)
Q Consensus 345 v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~l~~~~~~~---~l~~~~~~~~~~~l~~~~-~~~~- 413 (529)
+.+.. ..+..+|+++|...-+.++...+..|| ..|..+.+-..+.|+ .+-+++. +.+.. +.++ ++++
T Consensus 146 i~e~~~~~g~~l~g~kia~vGD~~~~rv~~Sl~~~l~~~~g~~v~~~~P~~~~~~~~~~~~~~-~~g~~-~~~~~d~~ea 223 (338)
T PRK08192 146 IQKELAHAGRGIDGMHIAMVGDLKFGRTVHSLSRLLCMYKNVSFTLVSPKELAMPDYVISDIE-NAGHK-ITITDQLEGN 223 (338)
T ss_pred HHHHhhccCCCcCCCEEEEECcCCCCchHHHHHHHHHHhcCCEEEEECCccccCCHHHHHHHH-HcCCe-EEEEcCHHHH
Confidence 77754 124579999998721278888888888 559999884444442 2211111 12223 3344 7764
Q ss_pred -CcceEEEEcCcCChhhhhcCCCCceeec-ccccCcc---C-CCCCcee-ecCCc
Q 009674 414 -HKTKIWLVGDDLTGKEQARAPKGTIFIP-YTQIPPR---K-LRKDCFY-HSTPA 461 (529)
Q Consensus 414 -~~~~vwivg~~~~~~~q~~a~~G~~f~~-~~~~~~~---~-~R~dc~y-~~~~a 461 (529)
++++|+... .+..|+..+...-..|.+ | |++.+ + .++|+.+ |.+|+
T Consensus 224 ~~~aDvvyt~-~~q~e~~~~~~~~~~~~~~y-~v~~e~l~~~a~~~ai~mHcLP~ 276 (338)
T PRK08192 224 LDKADILYLT-RIQEERFPSQEEANKYRGKF-RLNQSIYTQHCKSNTVIMHPLPR 276 (338)
T ss_pred HccCCEEEEc-CcccccccchHHHHHhhhcc-ccCHHHHHhhhCCCCEEECCCCC
Confidence 888888873 343332111111111222 3 47766 2 4678775 88886
No 487
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=79.41 E-value=2.2 Score=41.14 Aligned_cols=28 Identities=18% Similarity=0.303 Sum_probs=24.4
Q ss_pred EEEEecccCchhhHHHHHHHHhcc--CcEEEe
Q 009674 355 HVLLRGTVTANKVANAVASSLCQM--GIKVAT 384 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~--~~~v~l 384 (529)
+|+++|++| -||+++|+.|+++ ++++..
T Consensus 2 ~vlItGas~--gIG~~ia~~l~~~~~~~~v~~ 31 (235)
T PRK09009 2 NILIVGGSG--GIGKAMVKQLLERYPDATVHA 31 (235)
T ss_pred EEEEECCCC--hHHHHHHHHHHHhCCCCEEEE
Confidence 689999998 9999999999987 466665
No 488
>PRK06932 glycerate dehydrogenase; Provisional
Probab=79.38 E-value=2.9 Score=43.83 Aligned_cols=94 Identities=12% Similarity=0.081 Sum_probs=63.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--------
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------- 421 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------- 421 (529)
..++|-++|-- .||+++|+.|.--|.+|+-.++..- .+... ...++++ +.+|++++
T Consensus 146 ~gktvgIiG~G---~IG~~va~~l~~fg~~V~~~~~~~~----~~~~~-------~~~~l~ell~~sDiv~l~~Plt~~T 211 (314)
T PRK06932 146 RGSTLGVFGKG---CLGTEVGRLAQALGMKVLYAEHKGA----SVCRE-------GYTPFEEVLKQADIVTLHCPLTETT 211 (314)
T ss_pred CCCEEEEECCC---HHHHHHHHHHhcCCCEEEEECCCcc----ccccc-------ccCCHHHHHHhCCEEEEcCCCChHH
Confidence 45789999985 9999999999999999987322110 01000 0124554 56777553
Q ss_pred cCcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCceeecC
Q 009674 422 GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 459 (529)
Q Consensus 422 g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 459 (529)
-..|+.++..+||+|+++|-++| |+.+ .++ -|++..+-
T Consensus 212 ~~li~~~~l~~mk~ga~lIN~aRG~~Vde~AL~~aL~~g~i~gAaLDV~~~EP 264 (314)
T PRK06932 212 QNLINAETLALMKPTAFLINTGRGPLVDEQALLDALENGKIAGAALDVLVKEP 264 (314)
T ss_pred hcccCHHHHHhCCCCeEEEECCCccccCHHHHHHHHHcCCccEEEEecCCCCC
Confidence 24577888999999999999999 5544 344 57766663
No 489
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=79.37 E-value=1.8 Score=43.88 Aligned_cols=27 Identities=15% Similarity=0.306 Sum_probs=24.0
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 356 VLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 356 V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
|+|+||+| =||+.+|+.|.++|.++..
T Consensus 2 ilVtGa~G--fiG~~l~~~L~~~g~~~v~ 28 (308)
T PRK11150 2 IIVTGGAG--FIGSNIVKALNDKGITDIL 28 (308)
T ss_pred EEEecCCc--HHHHHHHHHHHhCCCceEE
Confidence 79999999 9999999999999985444
No 490
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=79.30 E-value=3.7 Score=43.46 Aligned_cols=86 Identities=15% Similarity=0.200 Sum_probs=57.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--------c
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------G 422 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--------g 422 (529)
-++|-+.|-- +||+++|+.|.--|-+|+-.++.+-.+.+++....+ + ++++ +.+|++++ -
T Consensus 146 gktvGIiG~G---rIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y------~-~l~ell~~sDii~l~~Plt~~T~ 215 (324)
T COG1052 146 GKTLGIIGLG---RIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARY------V-DLDELLAESDIISLHCPLTPETR 215 (324)
T ss_pred CCEEEEECCC---HHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCcee------c-cHHHHHHhCCEEEEeCCCChHHh
Confidence 5577777765 999999999998888888833333233333333322 2 2444 45555442 2
Q ss_pred CcCChhhhhcCCCCceeecccc---cCcc
Q 009674 423 DDLTGKEQARAPKGTIFIPYTQ---IPPR 448 (529)
Q Consensus 423 ~~~~~~~q~~a~~G~~f~~~~~---~~~~ 448 (529)
.-|..+++.+|++|++++-.+| ++.+
T Consensus 216 hLin~~~l~~mk~ga~lVNtaRG~~VDe~ 244 (324)
T COG1052 216 HLINAEELAKMKPGAILVNTARGGLVDEQ 244 (324)
T ss_pred hhcCHHHHHhCCCCeEEEECCCccccCHH
Confidence 3577889999999999999998 5554
No 491
>PRK08605 D-lactate dehydrogenase; Validated
Probab=79.11 E-value=4.4 Score=42.73 Aligned_cols=81 Identities=17% Similarity=0.137 Sum_probs=52.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEecchhhHHHHHhhCcccccccee-eeccccc--CcceEEEEc-----
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLC-QMGIKVATICKDDYEKLKLRIPVEAQHNLV-LSTSYAA--HKTKIWLVG----- 422 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~-~~~~~~~--~~~~vwivg----- 422 (529)
..++|.++|.- .||+++|+.|+ ..|.+|..+++..-...+.. + ...++++ ++++++++-
T Consensus 145 ~g~~VgIIG~G---~IG~~vA~~L~~~~g~~V~~~d~~~~~~~~~~---------~~~~~~l~ell~~aDvIvl~lP~t~ 212 (332)
T PRK08605 145 KDLKVAVIGTG---RIGLAVAKIFAKGYGSDVVAYDPFPNAKAATY---------VDYKDTIEEAVEGADIVTLHMPATK 212 (332)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhcCCCEEEEECCCccHhHHhh---------ccccCCHHHHHHhCCEEEEeCCCCc
Confidence 45679999974 99999999996 56888887333211111110 1 1235554 566665521
Q ss_pred ---CcCChhhhhcCCCCceeecccc
Q 009674 423 ---DDLTGKEQARAPKGTIFIPYTQ 444 (529)
Q Consensus 423 ---~~~~~~~q~~a~~G~~f~~~~~ 444 (529)
..++.+...++++|++++..++
T Consensus 213 ~t~~li~~~~l~~mk~gailIN~sR 237 (332)
T PRK08605 213 YNHYLFNADLFKHFKKGAVFVNCAR 237 (332)
T ss_pred chhhhcCHHHHhcCCCCcEEEECCC
Confidence 2334556778999999999999
No 492
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=78.75 E-value=5 Score=41.04 Aligned_cols=91 Identities=19% Similarity=0.165 Sum_probs=56.7
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc---c----cceeeeccccc--CcceEEEE--
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA---Q----HNLVLSTSYAA--HKTKIWLV-- 421 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~---~----~~l~~~~~~~~--~~~~vwiv-- 421 (529)
+|.++|+ | .+|+++|..|++.|.+|.+ |++++.+.++++-.... + ......++.++ ++++++|+
T Consensus 3 kI~iiG~-G--~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v 79 (325)
T PRK00094 3 KIAVLGA-G--SWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAV 79 (325)
T ss_pred EEEEECC-C--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeC
Confidence 5899997 4 9999999999999999988 88888888887621110 0 01112235543 56766552
Q ss_pred cCcCCh---hhh-hcCCCCceeeccc-ccCcc
Q 009674 422 GDDLTG---KEQ-ARAPKGTIFIPYT-QIPPR 448 (529)
Q Consensus 422 g~~~~~---~~q-~~a~~G~~f~~~~-~~~~~ 448 (529)
-+.-.+ ++. ...++|+++++.+ -+++.
T Consensus 80 ~~~~~~~v~~~l~~~~~~~~~vi~~~ngv~~~ 111 (325)
T PRK00094 80 PSQALREVLKQLKPLLPPDAPIVWATKGIEPG 111 (325)
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEEEeecccCC
Confidence 111000 111 1246889999987 36653
No 493
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=78.72 E-value=11 Score=39.53 Aligned_cols=162 Identities=13% Similarity=0.179 Sum_probs=93.1
Q ss_pred HHHcCCcEEEecc----ccccccc-------ccCCceeeecCCC---------CcceeeecCChh---------HHHHHH
Q 009674 296 ADAKGVKVISLGL----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSSL---------AAAVVV 346 (529)
Q Consensus 296 A~k~G~kv~~LG~----ln~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gnsl---------taavv~ 346 (529)
+.++|.+++.|+. +.++|.+ ....-+.+.|+|+ ..+++|+.+-+= =+.++.
T Consensus 60 ~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~ 139 (302)
T PRK14805 60 INKLGGHCLYLDQQNGALGKRESVADFAANLSCWADAIVARVFSHSTIEQLAEHGSVPVINALCDLYHPCQALADFLTLA 139 (302)
T ss_pred HHHcCCcEEECCCCcCcCCCCcCHHHHHHHHHHhCCEEEEeCCChhHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 4679999999964 3333443 4455567778766 245777766441 134444
Q ss_pred hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHh---hCccccccceeeec-cccc-Ccce
Q 009674 347 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKL---RIPVEAQHNLVLST-SYAA-HKTK 417 (529)
Q Consensus 347 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~---~l~~---~~~~~~~~~l~~~~-~~~~-~~~~ 417 (529)
+.... +..+|+++|... .+++..+.+|++-|.+|.+-..+.++ ++.+ ++..+.+.+ +.++ +.++ ++++
T Consensus 140 e~~g~l~g~kva~vGD~~--~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~a~~~~~~~g~~-~~~~~d~~a~~~aD 216 (302)
T PRK14805 140 EQFGDVSKVKLAYVGDGN--NVTHSLMYGAAILGATMTVICPPGHFPDGQIVAEAQELAAKSGGK-LVLTSDIEAIEGHD 216 (302)
T ss_pred HHhCCcCCcEEEEEcCCC--ccHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHHcCCE-EEEEcCHHHHCCCC
Confidence 43321 356899999964 89999999999999999993333222 1111 122223333 2334 6555 7888
Q ss_pred EEEEcCcCChhhh-hcCCCCceeecccccCcc---CCCCCceeecCCc
Q 009674 418 IWLVGDDLTGKEQ-ARAPKGTIFIPYTQIPPR---KLRKDCFYHSTPA 461 (529)
Q Consensus 418 vwivg~~~~~~~q-~~a~~G~~f~~~~~~~~~---~~R~dc~y~~~~a 461 (529)
|+..+.|.+..+. .....-..|-+|. ++++ ..++|-.-|.+|+
T Consensus 217 vvy~~~w~~~~~~~~~~~~~~~~~~y~-vt~~~l~~a~~~~vmH~lP~ 263 (302)
T PRK14805 217 AIYTDTWISMGDDTPLAEIKAKFAPYQ-VNKALMEKAGATFVMHCQPA 263 (302)
T ss_pred EEEeeceEeCCCccccHHHHHhccCCc-CCHHHHhcCCCCeEECCCCC
Confidence 8777666543211 0001112344453 7777 3345556778885
No 494
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=78.50 E-value=2.1 Score=42.54 Aligned_cols=28 Identities=18% Similarity=0.348 Sum_probs=26.1
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT 384 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l 384 (529)
+|+|+|+|| -||+++++.|.++|.+|..
T Consensus 1 kilv~G~tG--~iG~~l~~~l~~~g~~v~~ 28 (287)
T TIGR01214 1 RILITGANG--QLGRELVQQLSPEGRVVVA 28 (287)
T ss_pred CEEEEcCCC--HHHHHHHHHHHhcCCEEEE
Confidence 489999999 9999999999999999886
No 495
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=78.27 E-value=5.1 Score=42.14 Aligned_cols=64 Identities=16% Similarity=0.254 Sum_probs=40.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHH--HH--HhhCcc-ccccceeee-ccccc-CcceEEEE
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYE--KL--KLRIPV-EAQHNLVLS-TSYAA-HKTKIWLV 421 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~--~l--~~~~~~-~~~~~l~~~-~~~~~-~~~~vwiv 421 (529)
.+|.++|| | .+|+.+|..|+..|. .+.| .++++.+ .+ ...... +...+ +.. +++++ ++++++|.
T Consensus 7 ~KI~IIGa-G--~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~-I~~~~d~~~l~~aDiVI~ 80 (321)
T PTZ00082 7 RKISLIGS-G--NIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSK-VIGTNNYEDIAGSDVVIV 80 (321)
T ss_pred CEEEEECC-C--HHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeE-EEECCCHHHhCCCCEEEE
Confidence 68999996 6 999999999998886 7666 5555322 11 111111 11122 444 48877 89988774
No 496
>PLN02477 glutamate dehydrogenase
Probab=78.25 E-value=9 Score=41.91 Aligned_cols=29 Identities=17% Similarity=0.248 Sum_probs=26.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEE
Q 009674 352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVA 383 (529)
Q Consensus 352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~ 383 (529)
..++|++.|- | .||+.+|+.|.++|.+|+
T Consensus 205 ~g~~VaIqGf-G--nVG~~~A~~L~e~GakVV 233 (410)
T PLN02477 205 AGQTFVIQGF-G--NVGSWAAQLIHEKGGKIV 233 (410)
T ss_pred cCCEEEEECC-C--HHHHHHHHHHHHcCCEEE
Confidence 4578999994 6 999999999999999999
No 497
>cd03514 CrtR_beta-carotene-hydroxylase Beta-carotene hydroxylase (CrtR), the carotenoid zeaxanthin biosynthetic enzyme catalyzes the addition of hydroxyl groups to the beta-ionone rings of beta-carotene to form zeaxanthin and is found in bacteria and red algae. Carotenoids are important natural pigments; zeaxanthin and lutein are the only dietary carotenoids that accumulate in the macular region of the retina and lens. It is proposed that these carotenoids protect ocular tissues against photooxidative damage. CrtR does not show overall amino acid sequence similarity to the beta-carotene hydroxylases similar to CrtZ, an astaxanthin biosynthetic beta-carotene hydroxylase. However, CrtR does show sequence similarity to the green alga, Haematococcus pluvialis, beta-carotene ketolase (CrtW), which converts beta-carotene to canthaxanthin. Sequences of the CrtR_beta-carotene-hydroxylase domain family, as well as, the CrtW_beta-carotene-ketolase domain family appear to be structurally related
Probab=78.12 E-value=20 Score=35.23 Aligned_cols=22 Identities=27% Similarity=0.410 Sum_probs=15.5
Q ss_pred chhcccChhhhhhhhcCCCCCc
Q 009674 129 LKFLMYTPSYHSLHHTQFRTNY 150 (529)
Q Consensus 129 L~yli~tP~~H~lHH~~~~~NY 150 (529)
+.++...-.||..||-..+..+
T Consensus 167 ~~~l~~~~nyH~~HHL~P~IP~ 188 (207)
T cd03514 167 LNPLIMGQNYHLVHHLWPSIPW 188 (207)
T ss_pred HheeecCCchhHHHhCCCCCch
Confidence 3555566779999999866443
No 498
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=77.97 E-value=2.2 Score=43.28 Aligned_cols=36 Identities=17% Similarity=0.261 Sum_probs=31.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 009674 354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 392 (529)
Q Consensus 354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~ 392 (529)
++|.++|+. .+|.++|..|++.|.+|++ ++.++.++
T Consensus 4 ~kI~VIG~G---~mG~~ia~~la~~g~~V~~~d~~~~~~~~ 41 (282)
T PRK05808 4 QKIGVIGAG---TMGNGIAQVCAVAGYDVVMVDISDAAVDR 41 (282)
T ss_pred cEEEEEccC---HHHHHHHHHHHHCCCceEEEeCCHHHHHH
Confidence 469999995 9999999999999999999 67777753
No 499
>PLN02712 arogenate dehydrogenase
Probab=77.88 E-value=3.8 Score=47.43 Aligned_cols=103 Identities=15% Similarity=0.143 Sum_probs=60.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc---CcceEEEEc-----
Q 009674 353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA---HKTKIWLVG----- 422 (529)
Q Consensus 353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~---~~~~vwivg----- 422 (529)
+.+|.++| .| .+|.++|+.|.+.|.+|.. |+.++ + ..++++.. ..++.++ .+++++|+-
T Consensus 52 ~~kIgIIG-~G--~mG~slA~~L~~~G~~V~~~dr~~~~-~-~A~~~Gv~------~~~d~~e~~~~~aDvViLavP~~~ 120 (667)
T PLN02712 52 QLKIAIIG-FG--NYGQFLAKTLISQGHTVLAHSRSDHS-L-AARSLGVS------FFLDPHDLCERHPDVILLCTSIIS 120 (667)
T ss_pred CCEEEEEc-cC--HHHHHHHHHHHHCCCEEEEEeCCHHH-H-HHHHcCCE------EeCCHHHHhhcCCCEEEEcCCHHH
Confidence 56899999 57 9999999999999999887 44332 2 22223221 1334443 346775521
Q ss_pred --CcCChhhhhcCCCCceeecccccCcc-------CCCCCceeecCCccccCC
Q 009674 423 --DDLTGKEQARAPKGTIFIPYTQIPPR-------KLRKDCFYHSTPAMIIPP 466 (529)
Q Consensus 423 --~~~~~~~q~~a~~G~~f~~~~~~~~~-------~~R~dc~y~~~~a~~~P~ 466 (529)
+.++.--...+++|++++|++.+... .+.+++.|..+=.|-=|+
T Consensus 121 ~~~vl~~l~~~~l~~g~iVvDv~SvK~~~~~~l~~~l~~~~~~v~~HPMaG~e 173 (667)
T PLN02712 121 TENVLKSLPLQRLKRNTLFVDVLSVKEFAKNLLLDYLPEDFDIICSHPMFGPQ 173 (667)
T ss_pred HHHHHHhhhhhcCCCCeEEEECCCCcHHHHHHHHHhcCCCCeEEeeCCcCCCc
Confidence 22211111236789999999865531 122466666666665444
No 500
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=77.84 E-value=3.4 Score=42.66 Aligned_cols=37 Identities=16% Similarity=0.092 Sum_probs=31.9
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 009674 355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 394 (529)
Q Consensus 355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 394 (529)
+|.++| .| -+|+++|..|++.|.+|++ ++++..+..+
T Consensus 4 ~V~VIG-~G--~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~ 42 (308)
T PRK06129 4 SVAIIG-AG--LIGRAWAIVFARAGHEVRLWDADPAAAAAAP 42 (308)
T ss_pred EEEEEC-cc--HHHHHHHHHHHHCCCeeEEEeCCHHHHHHHH
Confidence 689999 55 9999999999999999999 7777777654
Done!