Query 009677
Match_columns 529
No_of_seqs 257 out of 1549
Neff 6.6
Searched_HMMs 46136
Date Thu Mar 28 16:01:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009677.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009677hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03552 Cellulose_synt: Cellu 100.0 2E-133 5E-138 1092.9 30.4 515 2-528 109-708 (720)
2 PLN02638 cellulose synthase A 100.0 1E-129 2E-134 1092.8 37.4 514 2-528 459-1061(1079)
3 PLN02436 cellulose synthase A 100.0 4E-129 8E-134 1084.7 41.3 513 2-528 475-1076(1094)
4 PLN02400 cellulose synthase 100.0 1E-129 3E-134 1092.1 37.1 514 2-528 466-1066(1085)
5 PLN02189 cellulose synthase 100.0 7E-129 2E-133 1083.5 37.9 513 2-528 441-1022(1040)
6 PLN02195 cellulose synthase A 100.0 3E-128 6E-133 1074.0 38.6 513 2-528 362-957 (977)
7 PLN02915 cellulose synthase A 100.0 6E-127 1E-131 1068.0 39.5 515 2-528 397-1026(1044)
8 PLN02248 cellulose synthase-li 100.0 6E-126 1E-130 1061.7 37.5 506 15-528 543-1120(1135)
9 PLN02190 cellulose synthase-li 100.0 5E-126 1E-130 1037.1 36.2 506 2-525 200-756 (756)
10 PLN02893 Cellulose synthase-li 100.0 5E-124 1E-128 1026.7 44.6 509 2-527 203-732 (734)
11 PRK11498 bcsA cellulose syntha 100.0 9.2E-58 2E-62 516.5 37.5 391 17-507 284-687 (852)
12 TIGR03030 CelA cellulose synth 100.0 5.3E-57 1.2E-61 510.3 40.2 364 47-508 202-575 (713)
13 PRK05454 glucosyltransferase M 100.0 5E-31 1.1E-35 295.4 36.7 222 46-338 191-420 (691)
14 cd04191 Glucan_BSP_ModH Glucan 100.0 4.9E-32 1.1E-36 271.7 19.5 181 46-290 66-253 (254)
15 PRK14583 hmsR N-glycosyltransf 100.0 1.7E-29 3.8E-34 272.2 30.6 203 15-294 96-306 (444)
16 COG1215 Glycosyltransferases, 100.0 6.6E-29 1.4E-33 264.8 22.9 206 15-294 76-290 (439)
17 PRK11204 N-glycosyltransferase 100.0 1.5E-27 3.2E-32 254.7 30.5 202 16-294 76-285 (420)
18 PRK14716 bacteriophage N4 adso 99.9 6.3E-25 1.4E-29 238.7 30.9 229 17-317 90-353 (504)
19 TIGR03111 glyc2_xrt_Gpos1 puta 99.9 4.1E-25 8.9E-30 238.0 25.6 251 16-346 71-341 (439)
20 PRK11234 nfrB bacteriophage N4 99.9 1.6E-23 3.5E-28 236.2 27.4 207 18-292 88-333 (727)
21 cd06437 CESA_CaSu_A2 Cellulose 99.9 2.9E-24 6.4E-29 210.2 17.5 196 16-288 23-232 (232)
22 cd06421 CESA_CelA_like CESA_Ce 99.9 8.3E-24 1.8E-28 205.6 19.5 201 17-292 25-234 (234)
23 cd06435 CESA_NdvC_like NdvC_li 99.9 7.3E-23 1.6E-27 200.2 18.4 206 16-296 21-235 (236)
24 cd06427 CESA_like_2 CESA_like_ 99.9 5.4E-23 1.2E-27 203.0 17.0 202 16-293 23-235 (241)
25 PF13641 Glyco_tranf_2_3: Glyc 99.9 1.4E-23 2.9E-28 204.1 2.8 196 17-287 24-228 (228)
26 PRK15489 nfrB bacteriophage N4 99.9 8.3E-20 1.8E-24 204.2 27.2 209 17-292 95-341 (703)
27 TIGR03472 HpnI hopanoid biosyn 99.8 1.2E-19 2.6E-24 191.7 16.9 198 15-289 62-273 (373)
28 cd04190 Chitin_synth_C C-termi 99.8 4.2E-20 9E-25 183.6 11.3 172 68-290 64-243 (244)
29 cd04192 GT_2_like_e Subfamily 99.8 5.3E-19 1.1E-23 170.7 17.4 198 16-287 19-229 (229)
30 cd02520 Glucosylceramide_synth 99.8 1.1E-19 2.3E-24 174.0 12.4 165 16-287 23-195 (196)
31 PF13632 Glyco_trans_2_3: Glyc 99.8 2.1E-19 4.6E-24 171.0 14.3 136 84-288 1-143 (193)
32 cd06434 GT2_HAS Hyaluronan syn 99.8 1.7E-18 3.6E-23 168.8 16.8 179 44-290 50-234 (235)
33 COG2943 MdoH Membrane glycosyl 99.8 6.5E-16 1.4E-20 162.9 30.5 219 43-332 208-433 (736)
34 cd06439 CESA_like_1 CESA_like_ 99.7 6.4E-17 1.4E-21 159.6 17.6 194 17-291 52-251 (251)
35 cd02525 Succinoglycan_BP_ExoA 99.6 1.5E-15 3.3E-20 148.4 14.3 197 17-293 23-232 (249)
36 TIGR03469 HonB hopene-associat 99.6 6.3E-14 1.4E-18 148.8 25.3 198 15-286 61-280 (384)
37 PF13506 Glyco_transf_21: Glyc 99.6 6.3E-15 1.4E-19 140.0 13.4 153 62-286 15-175 (175)
38 cd06436 GlcNAc-1-P_transferase 99.5 7.1E-14 1.5E-18 133.5 14.2 118 44-169 47-175 (191)
39 cd04195 GT2_AmsE_like GT2_AmsE 99.4 1.2E-12 2.7E-17 124.4 11.8 165 17-261 23-195 (201)
40 cd06438 EpsO_like EpsO protein 99.4 3.1E-12 6.7E-17 120.9 10.8 101 62-169 61-167 (183)
41 cd04184 GT2_RfbC_Mx_like Myxoc 99.3 2.2E-11 4.8E-16 115.6 11.4 166 17-261 25-195 (202)
42 cd06433 GT_2_WfgS_like WfgS an 99.2 6.2E-11 1.3E-15 111.3 10.9 163 17-261 21-188 (202)
43 cd04186 GT_2_like_c Subfamily 99.2 1.5E-10 3.2E-15 105.5 12.0 109 46-261 48-159 (166)
44 cd02526 GT2_RfbF_like RfbF is 99.2 4.9E-11 1.1E-15 116.3 8.7 146 45-261 45-198 (237)
45 cd02510 pp-GalNAc-T pp-GalNAc- 99.2 2.7E-10 5.8E-15 116.4 12.4 57 43-109 54-110 (299)
46 cd06442 DPM1_like DPM1_like re 99.1 1.5E-09 3.2E-14 104.8 15.0 150 38-261 44-197 (224)
47 TIGR01556 rhamnosyltran L-rham 99.1 2.8E-10 6E-15 115.1 10.0 164 27-261 25-195 (281)
48 PLN02726 dolichyl-phosphate be 99.1 2.6E-09 5.6E-14 105.8 16.2 159 28-261 45-212 (243)
49 cd06420 GT2_Chondriotin_Pol_N 99.1 1.5E-09 3.1E-14 101.4 13.4 117 48-261 54-174 (182)
50 cd04196 GT_2_like_d Subfamily 99.1 1.3E-09 2.8E-14 104.0 11.8 170 17-261 21-197 (214)
51 cd02522 GT_2_like_a GT_2_like_ 99.0 3.1E-09 6.7E-14 102.4 14.2 129 47-258 49-178 (221)
52 cd06913 beta3GnTL1_like Beta 1 99.0 1E-08 2.2E-13 99.4 15.8 87 17-109 20-111 (219)
53 cd04185 GT_2_like_b Subfamily 99.0 7.1E-09 1.5E-13 98.9 13.9 143 17-261 20-167 (202)
54 PF03142 Chitin_synth_2: Chiti 99.0 4.1E-09 8.8E-14 115.2 13.4 167 81-291 201-377 (527)
55 cd04188 DPG_synthase DPG_synth 98.9 2.5E-08 5.4E-13 96.1 15.5 62 38-109 47-109 (211)
56 cd06423 CESA_like CESA_like is 98.9 2.4E-09 5.2E-14 96.8 7.2 138 18-169 21-166 (180)
57 PF10111 Glyco_tranf_2_2: Glyc 98.8 5.6E-08 1.2E-12 99.0 14.0 167 27-261 38-216 (281)
58 PF00535 Glycos_transf_2: Glyc 98.7 6.5E-09 1.4E-13 93.9 3.3 131 27-169 31-165 (169)
59 PRK10073 putative glycosyl tra 98.7 5.1E-08 1.1E-12 101.7 10.1 90 16-118 28-119 (328)
60 cd04179 DPM_DPG-synthase_like 98.7 7.3E-08 1.6E-12 90.0 9.7 118 38-169 45-163 (185)
61 KOG2571 Chitin synthase/hyalur 98.7 1.6E-07 3.4E-12 106.6 12.7 161 68-287 429-596 (862)
62 cd04187 DPM1_like_bac Bacteria 98.6 3.8E-07 8.2E-12 85.5 12.5 114 38-169 46-159 (181)
63 COG1216 Predicted glycosyltran 98.6 4.8E-07 1E-11 93.1 13.5 172 17-261 26-214 (305)
64 cd00761 Glyco_tranf_GTA_type G 98.5 1.1E-06 2.3E-11 77.4 11.7 63 47-122 52-114 (156)
65 PRK10018 putative glycosyl tra 98.5 2.8E-06 6E-11 86.8 15.1 83 16-108 27-111 (279)
66 PRK10063 putative glycosyl tra 98.5 2.5E-06 5.5E-11 85.4 13.6 64 27-102 37-102 (248)
67 PRK10714 undecaprenyl phosphat 98.1 0.00031 6.7E-09 73.3 19.1 53 46-108 64-116 (325)
68 PTZ00260 dolichyl-phosphate be 98.0 0.00014 3E-09 76.1 15.9 64 47-121 137-200 (333)
69 KOG2547 Ceramide glucosyltrans 98.0 8.5E-06 1.8E-10 84.3 5.0 196 16-286 108-314 (431)
70 PRK13915 putative glucosyl-3-p 97.4 0.0014 3E-08 68.0 11.7 52 62-121 100-152 (306)
71 cd02511 Beta4Glucosyltransfera 96.5 0.013 2.7E-07 57.6 9.0 52 47-109 47-98 (229)
72 COG0463 WcaA Glycosyltransfera 95.3 0.074 1.6E-06 47.6 7.9 76 16-102 25-102 (291)
73 KOG2978 Dolichol-phosphate man 94.7 0.16 3.5E-06 48.7 8.5 80 27-120 39-122 (238)
74 PF02364 Glucan_synthase: 1,3- 94.5 1.9 4.2E-05 50.0 18.0 74 237-315 408-482 (817)
75 cd02514 GT13_GLCNAC-TI GT13_GL 90.7 1.5 3.3E-05 46.1 9.8 46 68-121 88-136 (334)
76 cd00899 b4GalT Beta-4-Galactos 86.3 2.7 6E-05 41.6 7.7 53 240-292 138-200 (219)
77 PF13712 Glyco_tranf_2_5: Glyc 83.8 1.6 3.4E-05 43.0 4.7 60 48-119 30-89 (217)
78 PF13704 Glyco_tranf_2_4: Glyc 73.8 6.2 0.00013 33.0 4.7 48 44-95 38-85 (97)
79 PF13896 Glyco_transf_49: Glyc 73.7 4.4 9.6E-05 42.3 4.6 45 70-119 120-164 (317)
80 KOG2977 Glycosyltransferase [G 71.0 8.8 0.00019 39.4 5.8 55 44-107 129-185 (323)
81 PRK09382 ispDF bifunctional 2- 69.2 26 0.00057 37.5 9.3 40 65-108 83-122 (378)
82 PF02709 Glyco_transf_7C: N-te 64.7 5 0.00011 33.0 2.2 21 241-261 47-67 (78)
83 cd02540 GT2_GlmU_N_bac N-termi 55.7 73 0.0016 30.5 9.1 55 47-109 62-117 (229)
84 KOG0916 1,3-beta-glucan syntha 45.4 7.4E+02 0.016 31.4 17.1 82 237-328 1172-1259(1679)
85 PF04724 Glyco_transf_17: Glyc 45.1 94 0.002 33.1 8.4 59 42-102 133-198 (356)
86 COG4092 Predicted glycosyltran 43.9 1.7E+02 0.0036 30.2 9.3 88 39-129 54-142 (346)
87 TIGR03310 matur_ygfJ molybdenu 40.3 1.7E+02 0.0036 27.0 8.6 55 48-109 63-117 (188)
88 cd04181 NTP_transferase NTP_tr 34.7 2E+02 0.0044 27.0 8.3 41 63-109 81-121 (217)
89 TIGR02665 molyb_mobA molybdopt 34.2 1.3E+02 0.0028 27.9 6.8 41 63-108 73-114 (186)
90 cd04182 GT_2_like_f GT_2_like_ 33.9 1.5E+02 0.0033 27.0 7.1 43 63-108 74-117 (186)
91 cd06915 NTP_transferase_WcbM_l 30.8 3.2E+02 0.0069 25.7 9.0 41 63-109 81-121 (223)
92 cd06422 NTP_transferase_like_1 28.4 2.9E+02 0.0063 26.3 8.3 40 63-108 82-121 (221)
93 COG1198 PriA Primosomal protei 28.3 2.8E+02 0.006 32.6 9.3 114 36-157 494-635 (730)
94 cd02503 MobA MobA catalyzes th 28.3 2.1E+02 0.0046 26.3 7.1 42 62-107 68-109 (181)
95 PF02434 Fringe: Fringe-like; 27.2 1.3E+02 0.0027 30.4 5.6 27 80-107 85-111 (252)
96 PF05679 CHGN: Chondroitin N-a 26.8 2.1E+02 0.0045 31.9 7.8 59 38-104 303-363 (499)
97 PF12804 NTP_transf_3: MobA-li 26.8 1.2E+02 0.0026 27.3 5.0 54 63-122 70-124 (160)
98 cd02509 GDP-M1P_Guanylyltransf 26.6 1.9E+02 0.0041 29.3 6.9 54 46-104 72-125 (274)
99 PLN02728 2-C-methyl-D-erythrit 26.4 3E+02 0.0065 27.7 8.2 41 65-107 103-143 (252)
100 TIGR01173 glmU UDP-N-acetylglu 24.8 3.5E+02 0.0075 29.0 8.9 43 63-109 75-118 (451)
101 PF06638 Strabismus: Strabismu 24.1 1.4E+02 0.003 33.2 5.5 50 479-528 171-221 (505)
102 PRK00317 mobA molybdopterin-gu 23.7 2.5E+02 0.0054 26.3 6.8 41 64-108 75-115 (193)
103 PRK14355 glmU bifunctional N-a 22.5 4E+02 0.0087 28.9 8.9 54 48-109 69-123 (459)
104 PF15050 SCIMP: SCIMP protein 22.3 1.2E+02 0.0027 27.2 3.9 41 381-422 2-47 (133)
105 cd02523 PC_cytidylyltransferas 21.9 2.8E+02 0.006 26.6 6.9 47 47-102 66-112 (229)
106 KOG3737 Predicted polypeptide 21.5 1.3E+02 0.0028 32.5 4.5 78 27-119 191-274 (603)
107 PRK02726 molybdopterin-guanine 21.3 4E+02 0.0088 25.3 7.8 41 64-108 79-119 (200)
108 PRK14353 glmU bifunctional N-a 20.3 4.2E+02 0.0092 28.4 8.5 43 63-108 82-125 (446)
109 PF01762 Galactosyl_T: Galacto 20.3 2E+02 0.0044 27.2 5.4 64 39-107 41-105 (195)
110 KOG4054 Uncharacterized conser 20.1 5.6E+02 0.012 24.5 7.9 79 441-524 37-117 (183)
No 1
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=2.1e-133 Score=1092.94 Aligned_cols=515 Identities=42% Similarity=0.763 Sum_probs=480.2
Q ss_pred hHHHhhhhhhcC-------------C---CCccccccceEEEEecCCCchhhHHHhhhccCCcEEEEEccCCCCCCCCCc
Q 009677 2 FEEHVTKAVEDG-------------E---YGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFK 65 (529)
Q Consensus 2 ~~~~~~~~~~~~-------------~---~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek~p~~~~~~K 65 (529)
|+.|||.+++++ . +.+++|||+||||+++++++. |.++.++|+++||+|||||+++||+|
T Consensus 109 ~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~~----~~~g~~lP~lvYvsREKrp~~~Hh~K 184 (720)
T PF03552_consen 109 FKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGGK----DVDGNELPMLVYVSREKRPGYPHHFK 184 (720)
T ss_pred HHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCCc----ccccCcCCeEEEEeccCCCCCCchhh
Confidence 688898665433 2 568999999999999998765 66788999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHHHH
Q 009677 66 AGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQ 145 (529)
Q Consensus 66 AGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 145 (529)
|||||+++|+|++|||+|||+|+|||||.|||+.++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++
T Consensus 185 AGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~~vQfpq~f~~i~~~d~y~~~~~~~~~~~ 264 (720)
T PF03552_consen 185 AGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIAFVQFPQRFDGIDKNDRYGNQNRVFFDIN 264 (720)
T ss_pred hcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeEEEeCCceeCCCCcCCCCCccceeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCcccccccceEecccccc-CCch-------------------------------------------------
Q 009677 146 WQGMDGLKGPVLSGTGYYIKRESLYA-DFTH------------------------------------------------- 175 (529)
Q Consensus 146 ~~g~d~~~~~~~~Gtg~v~RR~aL~g-~p~~------------------------------------------------- 175 (529)
++|+||+|||+|+||||+|||+|||| +|++
T Consensus 265 ~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (720)
T PF03552_consen 265 MRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSKKKPKKRASKRRESSSPIFALEDIE 344 (720)
T ss_pred ccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCcccccccccchhccccccccccccccccccc
Confidence 99999999999999999999999999 7762
Q ss_pred ----------------hhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccccCCCCc
Q 009677 176 ----------------TELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSV 239 (529)
Q Consensus 176 ----------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG~~~~sv 239 (529)
++++++||+|++|++|+..+.. ..+......++++||++|+||.||++|+||+||||.|+|+
T Consensus 345 ~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~--~~~~~~~~~~~L~EA~~V~sC~YE~~T~WGkevGwiYGSv 422 (720)
T PF03552_consen 345 EGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQG--GVPRSPSPASLLEEAIHVASCGYEDKTEWGKEVGWIYGSV 422 (720)
T ss_pred cccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhc--CCCCCCChHHHHHHHHHHhcCCccccCCcccccceEEEec
Confidence 1344679999999999987643 3334556689999999999999999999999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhccccccccccccCccccC-CCCCCHHHHHHHHHHh
Q 009677 240 SEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELS 318 (529)
Q Consensus 240 tED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv~~~~~~p~~~~-~~~l~~~qrl~y~~~~ 318 (529)
|||+.||++||++||||+||+|++++|.|+||+|+.+.+.|++|||.|++||++|||||++++ .++|+++||++|++.+
T Consensus 423 tEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~Pl~~g~~~rL~~lQrLaY~~~~ 502 (720)
T PF03552_consen 423 TEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSRHCPLWYGYGGRLKFLQRLAYLNYM 502 (720)
T ss_pred ccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhcCCchhccCCCCCcHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999987 5799999999999999
Q ss_pred HhhHHhHHHHHHHHHHHHHHHHhCCccccCCCchhHHHHHHHHHHHHHHHHHHHHHhCCccchhhchhhHHHHHHHHHHH
Q 009677 319 FFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHF 398 (529)
Q Consensus 319 ~~~~l~~i~~l~y~~~P~~~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~ 398 (529)
+|| ++|+|.++|+++|++||++|++++|+++.+|+.+++++|+++++++++|++|+|.++++|||+||+|++.++++++
T Consensus 503 ~yp-l~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~wsG~si~~WWrnQq~W~I~~tSa~L 581 (720)
T PF03552_consen 503 LYP-LTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFRWSGVSIREWWRNQQFWMIGGTSAHL 581 (720)
T ss_pred hhH-HHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHHhccCcHHHhhcccceeeehhhHHHH
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCcceeeccCccchhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHHHc--CCcchhH
Q 009677 399 YGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAV--GNWDKLF 476 (529)
Q Consensus 399 ~~~~~~ll~~l~~~~~~F~VTpK~~~~~~~~~y~~~~f~~~~~s~l~~P~~~l~~l~l~alv~gi~~~~~~--g~~~~~~ 476 (529)
++++++++|+||+++.+|.||+|..++++++ | ++.|+|+ ++++++|.++++++|++|+++|+++.+.. ++|++++
T Consensus 582 fAvl~~iLK~lg~s~t~F~VTsK~~dde~~~-~-~ely~f~-wS~LfiP~tTllilNLva~v~Gi~r~i~~g~~~~g~l~ 658 (720)
T PF03552_consen 582 FAVLQGILKVLGGSETSFTVTSKVSDDEDDK-Y-AELYIFK-WSPLFIPPTTLLILNLVAFVVGISRAINSGYGSWGPLL 658 (720)
T ss_pred HHHHHHHHHHHcCCccceeeccccccccccc-c-ccccccc-ccchhhHHHHHHHHHHHHHHHHHHHHhccCCCchhHHH
Confidence 9999999999999999999999998744433 3 3678898 89999999999999999999999999864 3689999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHHHHHhhhhc
Q 009677 477 PQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIIL 528 (529)
Q Consensus 477 ~~l~~~~w~v~~l~p~~~al~~r~~~~~~p~~~~~~s~~~~~~~~~~~~~~~ 528 (529)
+++++++|+++|++||++|||+||+ ++|+|+++||++||++|+++|+.++
T Consensus 659 g~lf~~~wVvv~lyPf~kGL~~R~~--r~P~~v~v~S~lla~i~~llwv~i~ 708 (720)
T PF03552_consen 659 GQLFFSFWVVVHLYPFLKGLFGRKD--RIPTSVIVWSVLLASIFSLLWVRID 708 (720)
T ss_pred HHHHHHHHHHHHhhHHHHhhhcccC--CcceeehHHHHHHHHHHHHHheecc
Confidence 9999999999999999999999976 5899999999999999999999875
No 2
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=1.1e-129 Score=1092.77 Aligned_cols=514 Identities=34% Similarity=0.660 Sum_probs=477.3
Q ss_pred hHHHhhhhh-------------hcCC---CCccccccceEEEEecCCCchhhHHHhhhccCCcEEEEEccCCCCCCCCCc
Q 009677 2 FEEHVTKAV-------------EDGE---YGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFK 65 (529)
Q Consensus 2 ~~~~~~~~~-------------~~~~---~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek~p~~~~~~K 65 (529)
||.|||.+. +||. +++++|||+||||+++++++. |.++.++|+++||+|||||+++||+|
T Consensus 459 ~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g~~~~dHp~IiqVll~~~~~~----d~~g~~lP~LVYVSREKRPg~~Hh~K 534 (1079)
T PLN02638 459 FKVRINGLVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGL----DTEGNELPRLVYVSREKRPGFQHHKK 534 (1079)
T ss_pred HHHHHHHHHhhccccCCccccccCCccCCCCCCCCCHHHHHHHhcCCCcc----ccccccccceEEEecccCCCCCcccc
Confidence 788999665 2233 568999999999999998754 45678999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHHHH
Q 009677 66 AGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQ 145 (529)
Q Consensus 66 AGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 145 (529)
|||||+++|+|++|||||||+|||||||+|||++++++||||+||+.++++||||+||+|+|++++|||+|++++||+++
T Consensus 535 AGAMNaLlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~ 614 (1079)
T PLN02638 535 AGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDIN 614 (1079)
T ss_pred cchHHHHHHHhhhccCCCeEeecccCcccCchHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCcccccccceEecccccc-CCchh------------------------------------------------
Q 009677 146 WQGMDGLKGPVLSGTGYYIKRESLYA-DFTHT------------------------------------------------ 176 (529)
Q Consensus 146 ~~g~d~~~~~~~~Gtg~v~RR~aL~g-~p~~~------------------------------------------------ 176 (529)
++|+||+|||+||||||+|||+|||| +|+..
T Consensus 615 ~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (1079)
T PLN02638 615 LRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLED 694 (1079)
T ss_pred cccccccCCccccccCcceeehhhcCcCCcccccccccccccccccccccccccccchhhcccccccccccccccccccc
Confidence 99999999999999999999999999 55320
Q ss_pred ---------------------hhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccccC
Q 009677 177 ---------------------ELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGIL 235 (529)
Q Consensus 177 ---------------------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG~~ 235 (529)
.+.++||+|++|++|+..+.+..+ ..+...+++++|++|+||.||++|+||+||||.
T Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~--~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~ 772 (1079)
T PLN02638 695 IEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVP--QSATPESLLKEAIHVISCGYEDKTDWGSEIGWI 772 (1079)
T ss_pred ccccccccccchhhhhhhhhhhhhhhccccHHHHHHHHHhhcCCC--CCCCcHHHHHHHHhhccCCCccCCchhhhcCee
Confidence 133689999999999988874433 334568999999999999999999999999999
Q ss_pred CCCccchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhccccccccccccCccccC-CCCCCHHHHHHH
Q 009677 236 YQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCY 314 (529)
Q Consensus 236 ~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv~~~~~~p~~~~-~~~l~~~qrl~y 314 (529)
|+|+|||+.||++||++||||+||+|+++++.|+||+|+.+++.||+|||+|++||+++|+||++++ .++|++.||++|
T Consensus 773 YGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Y 852 (1079)
T PLN02638 773 YGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAY 852 (1079)
T ss_pred ecceecHHHHHHHHHcCCCcEEecCCCchHhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHH
Confidence 9999999999999999999999998878999999999999999999999999999999999999976 378999999999
Q ss_pred HHHhHhhHHhHHHHHHHHHHHHHHHHhCCccccCCCchhHHHHHHHHHHHHHHHHHHHHHhCCccchhhchhhHHHHHHH
Q 009677 315 GELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSV 394 (529)
Q Consensus 315 ~~~~~~~~l~~i~~l~y~~~P~~~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~ 394 (529)
+++++|| ++++++++|+++|++||++|++++|+++.+++.+|+++|+++++++++|++|+|.++++|||+||+|+|.++
T Consensus 853 l~~~~yp-~~sip~liY~llP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~t 931 (1079)
T PLN02638 853 VNTTIYP-ITSIPLLLYCTLPAVCLLTGKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGV 931 (1079)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHcCCccCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhh
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCcceeeccCccchhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHHHcC--Cc
Q 009677 395 TAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NW 472 (529)
Q Consensus 395 ~~~~~~~~~~ll~~l~~~~~~F~VTpK~~~~~~~~~y~~~~f~~~~~s~l~~P~~~l~~l~l~alv~gi~~~~~~g--~~ 472 (529)
++++++++++++|+|++++.+|.||+|..+++.. .++.|+|+ |+++++|.++++++|++|+++|+.+++..| .|
T Consensus 932 Sa~lfavl~~iLK~Lggs~~~F~VTsK~~d~~~~---~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~ 1007 (1079)
T PLN02638 932 SAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD---FAELYMFK-WTTLLIPPTTLLIINLVGVVAGISYAINSGYQSW 1007 (1079)
T ss_pred HHHHHHHHHHHHHHHccCcccceecccccccccc---ccceeEec-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 9999999999999999999999999998754431 26899999 999999999999999999999999998655 68
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHHHHHhhhhc
Q 009677 473 DKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIIL 528 (529)
Q Consensus 473 ~~~~~~l~~~~w~v~~l~p~~~al~~r~~~~~~p~~~~~~s~~~~~~~~~~~~~~~ 528 (529)
+++++++++++|+++|++||++|||+|+ +++|+++++||++||++|+++|+.++
T Consensus 1008 ~~~~~~~~~~~wvv~~l~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~l~~v~~~ 1061 (1079)
T PLN02638 1008 GPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVVWSILLASIFSLLWVRID 1061 (1079)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHHHHHheec
Confidence 9999999999999999999999999996 68899999999999999999999775
No 3
>PLN02436 cellulose synthase A
Probab=100.00 E-value=3.7e-129 Score=1084.72 Aligned_cols=513 Identities=34% Similarity=0.657 Sum_probs=475.3
Q ss_pred hHHHhhhhhhc-------------CC---CCccccccceEEEEecCCCchhhHHHhhhccCCcEEEEEccCCCCCCCCCc
Q 009677 2 FEEHVTKAVED-------------GE---YGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFK 65 (529)
Q Consensus 2 ~~~~~~~~~~~-------------~~---~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek~p~~~~~~K 65 (529)
||.|||.++++ |. +++++|||+||||+++++++. |.++.++|+++||+|||||+++||+|
T Consensus 475 ~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~~~~----d~~g~~LP~LVYVSREKRPg~~Hh~K 550 (1094)
T PLN02436 475 FKVKINALVATAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGVR----DVEGNELPRLVYVSREKRPGFDHHKK 550 (1094)
T ss_pred HHHHHHHHHhhcccCchhhhhhccCccCCCCCCCCCccceEEEecCCCCc----ccccccCceEEEEecccCCCCCcchh
Confidence 78999977753 22 568999999999999997654 45678999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHHHH
Q 009677 66 AGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQ 145 (529)
Q Consensus 66 AGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 145 (529)
|||||+++|+||+|||+|||+|||||||.|||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||++.
T Consensus 551 AGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~ 630 (1094)
T PLN02436 551 AGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDIN 630 (1094)
T ss_pred hhhhhhhhhhheeecCCceEEecccccccCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCcccccccceEecccccc-CCch-------------------------------------------------
Q 009677 146 WQGMDGLKGPVLSGTGYYIKRESLYA-DFTH------------------------------------------------- 175 (529)
Q Consensus 146 ~~g~d~~~~~~~~Gtg~v~RR~aL~g-~p~~------------------------------------------------- 175 (529)
++|+||+|||+|+||||+|||+|||| +|+.
T Consensus 631 ~~GlDGlqGP~YvGTGC~frR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (1094)
T PLN02436 631 MKGLDGIQGPIYVGTGCVFRRQALYGYDAPKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHAL 710 (1094)
T ss_pred ccccccCCCccccccCceeeeeeeeccCCccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999 5441
Q ss_pred --------------------hhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccccC
Q 009677 176 --------------------TELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGIL 235 (529)
Q Consensus 176 --------------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG~~ 235 (529)
+.++++||+|++|++|+.++.. ..+..+...+++++|++|+||.||++|+||+||||.
T Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~--~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwi 788 (1094)
T PLN02436 711 ENIEEGIEGSNNEKSSETPQLKLEKKFGQSPVFVASTLLENG--GVPRNASPASLLREAIQVISCGYEDKTEWGKEIGWI 788 (1094)
T ss_pred cccccccccccchhhhhhhhhhHHhhhcccHHHHHHHHHhhc--CCCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCee
Confidence 1123679999999999988863 334445678899999999999999999999999999
Q ss_pred CCCccchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhccccccccccccCccccC-CCCCCHHHHHHH
Q 009677 236 YQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCY 314 (529)
Q Consensus 236 ~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv~~~~~~p~~~~-~~~l~~~qrl~y 314 (529)
|+|+|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+|||+|++||+++|++|++++ .++|+++||++|
T Consensus 789 YGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Y 868 (1094)
T PLN02436 789 YGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSY 868 (1094)
T ss_pred ccceecHHHHHHHHHcCCCceEeCCCCchhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHH
Confidence 9999999999999999999999998878899999999999999999999999999999999999975 368999999999
Q ss_pred HHHhHhhHHhHHHHHHHHHHHHHHHHhCCccccCCCchhHHHHHHHHHHHHHHHHHHHHHhCCccchhhchhhHHHHHHH
Q 009677 315 GELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSV 394 (529)
Q Consensus 315 ~~~~~~~~l~~i~~l~y~~~P~~~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~ 394 (529)
+++++|| ++++|.++|+++|++||++|++++|+++.+|+.+|+++|+++++++++|++|+|.++++|||+||+|+|.++
T Consensus 869 l~~~ly~-l~Slp~liY~~lP~l~LL~G~~i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~t 947 (1094)
T PLN02436 869 INSVVYP-WTSIPLIVYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGV 947 (1094)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHcCCeecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHH
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCcceeeccCccchhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHHHcC--Cc
Q 009677 395 TAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NW 472 (529)
Q Consensus 395 ~~~~~~~~~~ll~~l~~~~~~F~VTpK~~~~~~~~~y~~~~f~~~~~s~l~~P~~~l~~l~l~alv~gi~~~~~~g--~~ 472 (529)
++++++++++++|+|++++.+|.||+|..+++. .+++|+|+ |+++++|+++++++|++|+++|+.+++..| .|
T Consensus 948 Sa~Lfavl~~iLKvLggs~~~F~VTsK~~d~~~----~a~ly~f~-~S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~ 1022 (1094)
T PLN02436 948 SSHLFALFQGLLKVLAGVNTNFTVTSKAADDGE----FSELYLFK-WTSLLIPPTTLLIINIIGVIVGVSDAINNGYDSW 1022 (1094)
T ss_pred HHHHHHHHHHHHHHhccCcccceeccccccccc----ccceeeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 999999999999999999999999999875432 13678999 999999999999999999999999998755 68
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHHHHHhhhhc
Q 009677 473 DKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIIL 528 (529)
Q Consensus 473 ~~~~~~l~~~~w~v~~l~p~~~al~~r~~~~~~p~~~~~~s~~~~~~~~~~~~~~~ 528 (529)
+++++++++++|+++|++||++|||+| ++++|+++++||++||++|+++|+.++
T Consensus 1023 g~l~~~l~~~~wvvv~lyPf~kgL~gr--~~r~P~~v~v~s~lla~~~~l~~v~~~ 1076 (1094)
T PLN02436 1023 GPLFGRLFFALWVIVHLYPFLKGLLGK--QDRMPTIILVWSILLASILTLLWVRVN 1076 (1094)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCeeehHHHHHHHHHHHHHHeeec
Confidence 999999999999999999999999955 558999999999999999999999775
No 4
>PLN02400 cellulose synthase
Probab=100.00 E-value=1.5e-129 Score=1092.09 Aligned_cols=514 Identities=34% Similarity=0.649 Sum_probs=476.7
Q ss_pred hHHHhhhhhh-------------cCC---CCccccccceEEEEecCCCchhhHHHhhhccCCcEEEEEccCCCCCCCCCc
Q 009677 2 FEEHVTKAVE-------------DGE---YGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFK 65 (529)
Q Consensus 2 ~~~~~~~~~~-------------~~~---~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek~p~~~~~~K 65 (529)
||.|||.++. ||. +++++|||+||||+++++++. |.++.++|+++||+|||||+++||+|
T Consensus 466 ~k~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~iIqVll~~~~~~----d~~g~~LP~LVYVSREKRP~~~Hh~K 541 (1085)
T PLN02400 466 FKVRINALVAKAQKIPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGL----DTDGNELPRLVYVSREKRPGFQHHKK 541 (1085)
T ss_pred HHHHHHHHHhhhccCCccccccccCccCCCCCCCCCchhhhhhhcCCCCc----ccccccCceeEEEeccCCCCCCcchh
Confidence 7889997761 222 568999999999999998753 44678999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHHHH
Q 009677 66 AGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQ 145 (529)
Q Consensus 66 AGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 145 (529)
|||||+++|+||+|||+|||+|||||||+|||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||++.
T Consensus 542 AGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~ 621 (1085)
T PLN02400 542 AGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDIN 621 (1085)
T ss_pred hhhhHHHHHHhhhhcCCceEEecccccccCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCcccccccceEecccccc-CCch-------------------------------------------------
Q 009677 146 WQGMDGLKGPVLSGTGYYIKRESLYA-DFTH------------------------------------------------- 175 (529)
Q Consensus 146 ~~g~d~~~~~~~~Gtg~v~RR~aL~g-~p~~------------------------------------------------- 175 (529)
++|+||+|||+|+||||+|||+|||| +|+.
T Consensus 622 ~~GldGlqGP~YvGTGC~frR~aLYG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (1085)
T PLN02400 622 LKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMED 701 (1085)
T ss_pred ccccccCCCccccccCcceeeeeeccCCCccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999 5520
Q ss_pred ------------------hhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccccCCC
Q 009677 176 ------------------TELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQ 237 (529)
Q Consensus 176 ------------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG~~~~ 237 (529)
+.++++||+|++|++|+..+. ...+..+..++++++|++|+||.||++|+||+||||.|+
T Consensus 702 ~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~--~~~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYG 779 (1085)
T PLN02400 702 IEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQ--GGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYG 779 (1085)
T ss_pred cccccccccchhhhhhhhhhhhhhccccHHHHHHHHHHh--cCCCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeecc
Confidence 013458999999999998553 233444567899999999999999999999999999999
Q ss_pred CccchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhccccccccccccCccccC-CCCCCHHHHHHHHH
Q 009677 238 SVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGE 316 (529)
Q Consensus 238 svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv~~~~~~p~~~~-~~~l~~~qrl~y~~ 316 (529)
|+|||+.||++||++||||+||+|+++++.|+||+|+.+++.||+|||+|++||+++|+||++++ .++|++.|||+|++
T Consensus 780 SvTED~~TG~~LH~rGWrSvY~~p~r~af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~ 859 (1085)
T PLN02400 780 SVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYIN 859 (1085)
T ss_pred ceechHHHHHHHHccCCceEecCCCcHhhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHH
Confidence 99999999999999999999999888999999999999999999999999999999999999976 37999999999999
Q ss_pred HhHhhHHhHHHHHHHHHHHHHHHHhCCccccCCCchhHHHHHHHHHHHHHHHHHHHHHhCCccchhhchhhHHHHHHHHH
Q 009677 317 LSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTA 396 (529)
Q Consensus 317 ~~~~~~l~~i~~l~y~~~P~~~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~ 396 (529)
+++|| ++++|+++|+++|++||++|++++|+++.+++.+++++|+++++++++|++|+|.++++|||+||+|+|.++++
T Consensus 860 ~~~y~-~~slp~liY~llP~l~LltG~~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa 938 (1085)
T PLN02400 860 TIVYP-ITSIPLLAYCVLPAFCLITNKFIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSA 938 (1085)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHcCCccCCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHH
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCcceeeccCccchhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHHHcC--Ccch
Q 009677 397 HFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NWDK 474 (529)
Q Consensus 397 ~~~~~~~~ll~~l~~~~~~F~VTpK~~~~~~~~~y~~~~f~~~~~s~l~~P~~~l~~l~l~alv~gi~~~~~~g--~~~~ 474 (529)
++++++++++|+|++++.+|.||+|..+++. . .++.|+|+ |+++++|+++++++|++|+++|+++++..| .|++
T Consensus 939 ~Lfavl~~ilKvLgg~~~~F~VTsK~~d~~~--~-~~ely~f~-~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~ 1014 (1085)
T PLN02400 939 HLFAVFQGLLKVLAGIDTNFTVTSKASDEDG--D-FAELYVFK-WTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGP 1014 (1085)
T ss_pred HHHHHHHHHHHHhcCCcccceecCCcccccc--c-ccceeeec-ccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhH
Confidence 9999999999999999999999999875432 1 25899999 999999999999999999999999998754 7899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHHHHHhhhhc
Q 009677 475 LFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIIL 528 (529)
Q Consensus 475 ~~~~l~~~~w~v~~l~p~~~al~~r~~~~~~p~~~~~~s~~~~~~~~~~~~~~~ 528 (529)
+++++++++|+++|++||++|||+|+ +++|+++++||++||++|+++|+.++
T Consensus 1015 l~~~~~~~~wvvv~l~Pf~kgL~gR~--~r~P~~v~~~s~lla~~~~l~~v~~~ 1066 (1085)
T PLN02400 1015 LFGKLFFAIWVIAHLYPFLKGLLGRQ--NRTPTIVIVWSILLASIFSLLWVRID 1066 (1085)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccC--CCCceeHHHHHHHHHHHHHHHheecc
Confidence 99999999999999999999999996 78999999999999999999999765
No 5
>PLN02189 cellulose synthase
Probab=100.00 E-value=6.9e-129 Score=1083.53 Aligned_cols=513 Identities=34% Similarity=0.671 Sum_probs=475.7
Q ss_pred hHHHhhhhh-------------hcCC---CCccccccceEEEEecCCCchhhHHHhhhccCCcEEEEEccCCCCCCCCCc
Q 009677 2 FEEHVTKAV-------------EDGE---YGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFK 65 (529)
Q Consensus 2 ~~~~~~~~~-------------~~~~---~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek~p~~~~~~K 65 (529)
||.|||.+. +||. +++++|||+|+||+++++++. |.++.++|+++||+|||||+++||+|
T Consensus 441 ~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g~~~~dHp~IiQVll~~~~~~----d~~g~~lP~LVYVSREKrPg~~Hh~K 516 (1040)
T PLN02189 441 FKVRINAIVAKAQKVPPEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGH----DTEGNELPRLVYVSREKRPGFQHHKK 516 (1040)
T ss_pred HHHHHHHHHhhcCccCCccceeccCccCCCCCCCCCHHHHHHHhcCCCCc----cccccccceeEEEeccCCCCCCcccc
Confidence 788888655 3333 568999999999999987753 44677899999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHHHH
Q 009677 66 AGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQ 145 (529)
Q Consensus 66 AGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 145 (529)
|||||+++|+|++|||||||+|||||||+|||++++++||||+||+.++++||||+||+|+|++++|||+|++++||+++
T Consensus 517 AGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~ 596 (1040)
T PLN02189 517 AGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDIN 596 (1040)
T ss_pred hhhHHHHHHHhhhccCCCeEEEccCccccCchHHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeee
Confidence 99999999999999999999999999999999999999999999998999999999999999999999999999999999
Q ss_pred HHHhhccCCcccccccceEecccccc-CCch------------------------------------------------h
Q 009677 146 WQGMDGLKGPVLSGTGYYIKRESLYA-DFTH------------------------------------------------T 176 (529)
Q Consensus 146 ~~g~d~~~~~~~~Gtg~v~RR~aL~g-~p~~------------------------------------------------~ 176 (529)
++|+||+|||+||||||+|||+|||| +|+. .
T Consensus 597 ~~GlDGlqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (1040)
T PLN02189 597 MKGLDGIQGPVYVGTGCVFRRQALYGYDPPKGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQM 676 (1040)
T ss_pred ecccccCCCccccccCceeeeeeeeccCcccccccccccccchhhhcccccccccccccccccccccccchhhhhhhhhh
Confidence 99999999999999999999999999 5631 1
Q ss_pred hhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccccCCCCccchHHHHHHHHhCCCeE
Q 009677 177 ELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTS 256 (529)
Q Consensus 177 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG~~~~svtED~~t~~~l~~~Gwrs 256 (529)
++.++||+|.+|++|+..+.. ..+..+...+++++|++|+||.||++|+||+||||.|+|+|||+.||++||++||||
T Consensus 677 ~~~~~fG~S~~fi~S~~~~~~--~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrS 754 (1040)
T PLN02189 677 NFEKKFGQSAIFVTSTLMEEG--GVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRS 754 (1040)
T ss_pred hhHhhhccchhhhhhhhhhhc--CCCCCCCcHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCce
Confidence 234589999999999988742 233345668899999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCceecccCCCHHHHHhhhhhhccccccccccccCccccCC--CCCCHHHHHHHHHHhHhhHHhHHHHHHHHHH
Q 009677 257 TYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGP--SRMSLLQSMCYGELSFFPLLYCLPLWCLATL 334 (529)
Q Consensus 257 ~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv~~~~~~p~~~~~--~~l~~~qrl~y~~~~~~~~l~~i~~l~y~~~ 334 (529)
+||+|+++++.|+||+|+.+++.||+|||+|++||+++|+||++++. ++|++.||++|+++++|| ++++|.++|+++
T Consensus 755 vY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~-~~sip~liY~~l 833 (1040)
T PLN02189 755 IYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYP-FTSLPLLAYCTL 833 (1040)
T ss_pred EecCCCcHHhcCcCCCCHHHHHHHHHHHhhhhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 99998889999999999999999999999999999999999999753 679999999999999999 999999999999
Q ss_pred HHHHHHhCCccccCCCchhHHHHHHHHHHHHHHHHHHHHHhCCccchhhchhhHHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 009677 335 PQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKA 414 (529)
Q Consensus 335 P~~~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~~ll~~l~~~~~ 414 (529)
|++||++|++++|+++.+++.+++++|+.+++++++|++|+|.++++|||+||+|+|.++++++++++++++|+|++++.
T Consensus 834 P~l~Ll~g~~i~p~vs~~~~~~fi~lf~~~~~~~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~ 913 (1040)
T PLN02189 834 PAICLLTGKFIMPPISTFASLFFIALFMSIFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDT 913 (1040)
T ss_pred HHHHHhcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeccCccchhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHHHcC--CcchhHHHHHHHHHHHHHHHHH
Q 009677 415 SFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAI 492 (529)
Q Consensus 415 ~F~VTpK~~~~~~~~~y~~~~f~~~~~s~l~~P~~~l~~l~l~alv~gi~~~~~~g--~~~~~~~~l~~~~w~v~~l~p~ 492 (529)
+|.||+|..++++. ++.|+|+ |+++++|.++++++|++|+++|+++++..| .|+++++++++++|+++|++||
T Consensus 914 ~F~VTsK~~~d~~~----~~ly~f~-~s~l~iP~ttl~i~Nlvaiv~g~~~~~~~~~~~~~~~~~~~~~~~wvv~~~~Pf 988 (1040)
T PLN02189 914 NFTVTSKATDDDEF----GELYAFK-WTTLLIPPTTLLIINIVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPF 988 (1040)
T ss_pred cceecccccccccc----ccceeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHH
Confidence 99999998765431 4789999 999999999999999999999999998755 6899999999999999999999
Q ss_pred HHHHhhhcCCCCCchHHHHHHHHHHHHHHHHhhhhc
Q 009677 493 VEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIIL 528 (529)
Q Consensus 493 ~~al~~r~~~~~~p~~~~~~s~~~~~~~~~~~~~~~ 528 (529)
++|||+|+ +++|+++++||++|+++|+++|+.++
T Consensus 989 ~kgl~gR~--~r~P~~v~v~s~ll~~~~~l~~v~~~ 1022 (1040)
T PLN02189 989 LKGLMGRQ--NRTPTIVVIWSVLLASIFSLLWVRID 1022 (1040)
T ss_pred HHHHhccC--CCCCeeehHHHHHHHHHHHHHHheec
Confidence 99999996 68899999999999999999999765
No 6
>PLN02195 cellulose synthase A
Probab=100.00 E-value=2.7e-128 Score=1073.96 Aligned_cols=513 Identities=35% Similarity=0.654 Sum_probs=474.8
Q ss_pred hHHHhhhhhhc-------------CC---CCccccccceEEEEecCCCchhhHHHhhhccCCcEEEEEccCCCCCCCCCc
Q 009677 2 FEEHVTKAVED-------------GE---YGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFK 65 (529)
Q Consensus 2 ~~~~~~~~~~~-------------~~---~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek~p~~~~~~K 65 (529)
||.|||.++++ |. +++++|||+||||+++++++. |.++.++|+++||+|||||+++||+|
T Consensus 362 ~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~~~~dHp~IIqVll~~~~~~----d~~g~~lP~LVYVSREKrPg~~Hh~K 437 (977)
T PLN02195 362 YKVRVNALVAKAQKTPEEGWTMQDGTPWPGNNTRDHPGMIQVFLGETGAR----DIEGNELPRLVYVSREKRPGYQHHKK 437 (977)
T ss_pred HHHHHHHHHhhcccCCcccccccCCccCCCCCCCCCcchhhhhccCCCCc----ccccccCceeEEEeccCCCCCCcccc
Confidence 78999977754 11 568999999999999887643 44677999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHHHH
Q 009677 66 AGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQ 145 (529)
Q Consensus 66 AGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 145 (529)
|||||+++|+|++|||+|||+++|||||++||++++++||||+||+.++++||||+||+|+|.+++|||++++++||+++
T Consensus 438 AGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~ 517 (977)
T PLN02195 438 AGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVN 517 (977)
T ss_pred cchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeee
Confidence 99999999999999999999999999999988999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCcccccccceEecccccc-CCchh------------------------------------------------
Q 009677 146 WQGMDGLKGPVLSGTGYYIKRESLYA-DFTHT------------------------------------------------ 176 (529)
Q Consensus 146 ~~g~d~~~~~~~~Gtg~v~RR~aL~g-~p~~~------------------------------------------------ 176 (529)
++|+||+|||+||||||+|||+|||| +|+..
T Consensus 518 ~~g~dglqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (977)
T PLN02195 518 MKGLDGIQGPVYVGTGCVFNRQALYGYGPPSLPRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREID 597 (977)
T ss_pred eccccccCCccccccCceeeehhhhccCccccccccccccccccccccccccccccchhhcccccccccccccccccccc
Confidence 99999999999999999999999999 65320
Q ss_pred --------------hhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccccCCCCccch
Q 009677 177 --------------ELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSED 242 (529)
Q Consensus 177 --------------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG~~~~svtED 242 (529)
+++++||+|.+|++|+..+.+..+. .+...+++++|++|+||.||++|+||+||||.|+|+|||
T Consensus 598 ~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~--~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED 675 (977)
T PLN02195 598 NYDEYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPE--SANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTED 675 (977)
T ss_pred ccchhhhhhhhhhhHHHHhhcccHHHHHHHHHHhcCCCC--CCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecH
Confidence 2345899999999999877643332 345678999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhccccccccccccCccccCC--CCCCHHHHHHHHHHhHh
Q 009677 243 LFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGP--SRMSLLQSMCYGELSFF 320 (529)
Q Consensus 243 ~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv~~~~~~p~~~~~--~~l~~~qrl~y~~~~~~ 320 (529)
+.||++||++||||+||+|+++++.|+||+|+.+++.||+|||+|++|++++|+||++++. ++|+++||++|+++++|
T Consensus 676 v~TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly 755 (977)
T PLN02195 676 ILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVY 755 (977)
T ss_pred HHHHHHHHccCCcEEecCCccHHhcccCCCCHHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999998888999999999999999999999999999999999999753 78999999999999999
Q ss_pred hHHhHHHHHHHHHHHHHHHHhCCccccCCCchhHHHHHHHHHHHHHHHHHHHHHhCCccchhhchhhHHHHHHHHHHHHH
Q 009677 321 PLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYG 400 (529)
Q Consensus 321 ~~l~~i~~l~y~~~P~~~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~ 400 (529)
| ++++|.++|+++|++||++|++++|+++.+++.+++++|+++++++++|++|+|.++++|||+||+|+|.++++++++
T Consensus 756 ~-~~slp~liY~~lP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfa 834 (977)
T PLN02195 756 P-FTSLPLIAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFA 834 (977)
T ss_pred H-HHHHHHHHHHHHHHHHHHcCCeecccchHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHH
Confidence 9 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcceeeccCccchhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHHHcC--CcchhHHH
Q 009677 401 SMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQ 478 (529)
Q Consensus 401 ~~~~ll~~l~~~~~~F~VTpK~~~~~~~~~y~~~~f~~~~~s~l~~P~~~l~~l~l~alv~gi~~~~~~g--~~~~~~~~ 478 (529)
++++++|+|++++.+|.||+|..++++ .+++|+|+ |+++++|.++++++|++|+++|+.+++..| .|++++++
T Consensus 835 vl~~llKvLggs~~~F~VTsK~~dd~~----~~~~Y~f~-~S~l~iP~ttl~ilNlvaiv~g~~~~i~~~~~~~g~l~~~ 909 (977)
T PLN02195 835 VFQGFLKMLAGLDTNFTVTAKAADDTE----FGELYMVK-WTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGK 909 (977)
T ss_pred HHHHHHHHHcCCCccceeccccccccc----hhcceecc-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHH
Confidence 999999999999999999999876432 13678999 999999999999999999999999998755 68999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHHHHHhhhhc
Q 009677 479 LLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIIL 528 (529)
Q Consensus 479 l~~~~w~v~~l~p~~~al~~r~~~~~~p~~~~~~s~~~~~~~~~~~~~~~ 528 (529)
+++++|+++|++||++|||+|+ +|+|+++++||++||++|+++|+.++
T Consensus 910 ~~~~~wvv~~~~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~l~~v~~~ 957 (977)
T PLN02195 910 VFFAFWVILHLYPFLKGLMGRQ--NRTPTIVVLWSVLLASVFSLVWVKIN 957 (977)
T ss_pred HHHHHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHHHHHeecc
Confidence 9999999999999999999997 68899999999999999999999765
No 7
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=6.5e-127 Score=1067.97 Aligned_cols=515 Identities=35% Similarity=0.649 Sum_probs=473.9
Q ss_pred hHHHhhhhhhc------------CC----CCccccccceEEEEecCCCchhhHHHhhhccCCcEEEEEccCCCCCCCCCc
Q 009677 2 FEEHVTKAVED------------GE----YGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFK 65 (529)
Q Consensus 2 ~~~~~~~~~~~------------~~----~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek~p~~~~~~K 65 (529)
||.|||.++++ ++ +++.+|||+||||+++++++. |.++.++|+++||+|||||+++||+|
T Consensus 397 ~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~~~~----d~~g~~lP~LVYVSREKRP~~~Hh~K 472 (1044)
T PLN02915 397 FKVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSEGAL----DVEGKELPRLVYVSREKRPGYNHHKK 472 (1044)
T ss_pred HHHHHHHHHhhhccCCcccccccCCccCCCCCCCCCccceEEeecCCCCc----ccccCccceeEEEecccCCCCCcchh
Confidence 78999977755 11 456799999999999987653 44677999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHHHH
Q 009677 66 AGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQ 145 (529)
Q Consensus 66 AGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 145 (529)
|||||+++|+|++|||+|||+|||||||.|||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||++.
T Consensus 473 AGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~ 552 (1044)
T PLN02915 473 AGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDIN 552 (1044)
T ss_pred hhhhhhHhhhhheeecCcEEEeeccccccCcchhhHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCcccccccceEecccccc-CCch-------------------------------------------------
Q 009677 146 WQGMDGLKGPVLSGTGYYIKRESLYA-DFTH------------------------------------------------- 175 (529)
Q Consensus 146 ~~g~d~~~~~~~~Gtg~v~RR~aL~g-~p~~------------------------------------------------- 175 (529)
++|+||+|||+|+||||+|||+|||| +|+.
T Consensus 553 ~~GldGlqGP~YvGTGCffrR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (1044)
T PLN02915 553 MKGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRK 632 (1044)
T ss_pred cccccccCCcccccCCceeeeeeecCcCCccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999 5541
Q ss_pred ----------------------------------------------hhhhhccCCchhhHhhhhhhhcccCCCCCCchhh
Q 009677 176 ----------------------------------------------TELKDTFGKSNVLINSLHQSYKQNNANGENFSNV 209 (529)
Q Consensus 176 ----------------------------------------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (529)
+.++++||+|++|++|+..+.. ..+..+...+
T Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~--~~~~~~~~~s 710 (1044)
T PLN02915 633 KKGGGGGSMMGKKYGRKKSQAVFDLEEIEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDG--GLPEGTNPAA 710 (1044)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhc--CCCCCCCcHH
Confidence 0133589999999999988543 3344456788
Q ss_pred hHHhhccccccccccccccccccccCCCCccchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhccccc
Q 009677 210 LQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLT 289 (529)
Q Consensus 210 ~~~~a~~v~~c~ye~~t~wg~~iG~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~ 289 (529)
++++|++|+||.||++|+||+||||.|+|+|||+.||++||++||||+||+|+++++.|+||+|+.++++||+|||+|++
T Consensus 711 ~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~l 790 (1044)
T PLN02915 711 LIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSV 790 (1044)
T ss_pred HHHHHHhccccCCCccCchhHhhCccccccccHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHH
Confidence 99999999999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred cccccccCccccC-CCCCCHHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHhCCccccCCCchhHHHHHHHHHHHHHHH
Q 009677 290 DVGLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKH 368 (529)
Q Consensus 290 qv~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~l~~i~~l~y~~~P~~~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~ 368 (529)
|++++|++|++++ .++|+++||++|+++++|| +.+++.++|+++|++||++|++++|.++..+..+++++|+++++++
T Consensus 791 qIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~yp-~~slp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~ 869 (1044)
T PLN02915 791 EIFMSRHCPLWYAYGGKLKWLERLAYINTIVYP-FTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATS 869 (1044)
T ss_pred HHHHhccCCcccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHH
Confidence 9999999999964 3799999999999999999 9999999999999999999999999887766667778889999999
Q ss_pred HHHHHHhCCccchhhchhhHHHHHHHHHHHHHHHHHHHHHHcCCCcceeeccCccchhhhhhhcccceeecccchhhHHH
Q 009677 369 LQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPM 448 (529)
Q Consensus 369 ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~~ll~~l~~~~~~F~VTpK~~~~~~~~~y~~~~f~~~~~s~l~~P~ 448 (529)
+++++|+|.++++||++||+|+|.++++++++++++++++|++++.+|+||+|+.+.+.++. ++.|+|+ |+++++|+
T Consensus 870 lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLg~se~~F~VTsK~~d~~~d~~--~ely~F~-~S~l~iP~ 946 (1044)
T PLN02915 870 VLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAADDEADEF--GELYLFK-WTTLLIPP 946 (1044)
T ss_pred HHHHHhcCCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccCCcceecCCccccchhhh--ccceeec-ceehHHHH
Confidence 99999999999999999999999999999999999999999999999999999876543322 5889999 99999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHc--CCcchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHHHHHhhh
Q 009677 449 VSLMILNMAALLCGFIRIIAV--GNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSI 526 (529)
Q Consensus 449 ~~l~~l~l~alv~gi~~~~~~--g~~~~~~~~l~~~~w~v~~l~p~~~al~~r~~~~~~p~~~~~~s~~~~~~~~~~~~~ 526 (529)
++++++|++|+++|+++++.. +.|+.+++++++++|+++|++||++||++|+ +++|+++++||++||++|+++|+.
T Consensus 947 ttllllNlvalv~Gi~~~i~~~~~~~g~l~~~l~~~~wvvv~lyPf~kgLmgR~--~r~P~~v~v~s~lla~~~~ll~v~ 1024 (1044)
T PLN02915 947 TTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVLWSILLASIFSLVWVR 1024 (1044)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCeeehHHHHHHHHHHHHHHhe
Confidence 999999999999999999864 5688899999999999999999999999996 688999999999999999999997
Q ss_pred hc
Q 009677 527 IL 528 (529)
Q Consensus 527 ~~ 528 (529)
++
T Consensus 1025 ~~ 1026 (1044)
T PLN02915 1025 ID 1026 (1044)
T ss_pred ec
Confidence 65
No 8
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=5.6e-126 Score=1061.74 Aligned_cols=506 Identities=30% Similarity=0.556 Sum_probs=458.8
Q ss_pred CCccccccceEEEEecCCCch--------hhHHH--hhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCE
Q 009677 15 YGNSQNHSTIIEIIQETFGES--------ETIRQ--ADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPY 84 (529)
Q Consensus 15 ~~~~~~h~~~i~v~~~~~~~~--------~~~~~--~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~ 84 (529)
+.+++|||+||||++++++++ +..+| ..+.++|+++||+|||||+++||+||||||+++|+|++||||||
T Consensus 543 ~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPf 622 (1135)
T PLN02248 543 DHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPF 622 (1135)
T ss_pred CCCCCCCcceeEEeccCCCcccccCcccccccccccccccccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCe
Confidence 358899999999999876522 11233 23458999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHHHHHHHhhccCCcccccccceE
Q 009677 85 ILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYI 164 (529)
Q Consensus 85 i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~v~ 164 (529)
|+|||||||+|||++++++||||+|++ ++++||||+||+|+|++++|||+|++++||+++++|+||+|||+||||||+|
T Consensus 623 ILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQrF~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCff 701 (1135)
T PLN02248 623 ILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLF 701 (1135)
T ss_pred EEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCcccCCCCCCCccCCcceeeeeeeeccccccCCccccccCcee
Confidence 999999999999999999999999997 8999999999999999999999999999999999999999999999999999
Q ss_pred ecccccc-CCchh----------------------------------------hhhhccCCchhhHhhhhhhhcc-cCC-
Q 009677 165 KRESLYA-DFTHT----------------------------------------ELKDTFGKSNVLINSLHQSYKQ-NNA- 201 (529)
Q Consensus 165 RR~aL~g-~p~~~----------------------------------------~~~~~~g~~~~~~~~~~~~~~~-~~~- 201 (529)
||+|||| +|++. .+.++||+|.+|++|+.++..+ ++.
T Consensus 702 RR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~ 781 (1135)
T PLN02248 702 RRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEEQPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLA 781 (1135)
T ss_pred eehhhcCcCCcccccccccccccccccccccccccccccccccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccc
Confidence 9999999 66431 1235899999999999776521 111
Q ss_pred ----------------CCCCchhhhHHhhccccccccccccccccccccCCCCccchHHHHHHHHhCCCeEEEeCCCCCc
Q 009677 202 ----------------NGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQ 265 (529)
Q Consensus 202 ----------------~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~ 265 (529)
+..+...++++||++|+||.||++|+||+||||.|+|+|||+.||++||++||||+||+|++++
T Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~A 861 (1135)
T PLN02248 782 DHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDA 861 (1135)
T ss_pred cccccccccccccccccccCCcHHHHHHHHhhcccccccCCchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHh
Confidence 1233456899999999999999999999999999999999999999999999999999887899
Q ss_pred eecccCCCHHHHHhhhhhhccccccccccccCccccCCCCCCHHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHhCCcc
Q 009677 266 FLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISL 345 (529)
Q Consensus 266 ~~g~aP~~l~~~~~Qr~RWa~G~~qv~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~l~~i~~l~y~~~P~~~ll~g~~~ 345 (529)
+.|+||+|+.++++||+|||+|++||+++|++|++.+ ++|++.||++|+++++|| +.+++.++|+++|++||++|+++
T Consensus 862 F~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~-~~Lsl~QRL~Yl~~~lyp-f~Slp~liY~llP~l~LLtGi~~ 939 (1135)
T PLN02248 862 FRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS-RRLKFLQRIAYLNVGIYP-FTSIFLIVYCFLPALSLFSGQFI 939 (1135)
T ss_pred hcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC-CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCcc
Confidence 9999999999999999999999999999999999875 799999999999999999 99999999999999999999999
Q ss_pred ccCCCchhHHHHH-HHHHHHHHHHHHHHHHhCCccchhhchhhHHHHHHHHHHHHHHHHHHHHHHcCCCcceeeccCccc
Q 009677 346 YPEVSSPSFIVFS-FIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLD 424 (529)
Q Consensus 346 ~p~~~~~~~~~~~-~~~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~~ll~~l~~~~~~F~VTpK~~~ 424 (529)
+|+.+ +++++++ .+++.++++.++|.+|+|.++++|||+||+|++.++++++++++++++|+|++++.+|+||+|+.+
T Consensus 940 ~p~~~-~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWrnQq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~ 1018 (1135)
T PLN02248 940 VQTLN-VTFLVYLLIITITLCLLAVLEIKWSGITLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAG 1018 (1135)
T ss_pred ccccc-HHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhhhhheeeehhhHHHHHHHHHHHHHHhcCccccceeCCcccc
Confidence 99864 5555444 445777899999999999999999999999999999999999999999999999999999999987
Q ss_pred hhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHHHc--CCcchhHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 009677 425 KEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAV--GNWDKLFPQLLLSLYILIINFAIVEGMIVRKDK 502 (529)
Q Consensus 425 ~~~~~~y~~~~f~~~~~s~l~~P~~~l~~l~l~alv~gi~~~~~~--g~~~~~~~~l~~~~w~v~~l~p~~~al~~r~~~ 502 (529)
++..++| ++.|+|+ ++++++|+++++++|++|+++|++|++.. +.|+.+++++++++|++++++||++|||+| |
T Consensus 1019 ~d~~~~~-a~ly~f~-wS~L~iP~ttl~llNLvAivvGv~R~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR--~ 1094 (1135)
T PLN02248 1019 DDEDDEF-ADLYIVK-WTSLMIPPITIMMVNLIAIAVGVSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGR--R 1094 (1135)
T ss_pred ccccccc-chheecC-cchHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhHHHHHHHHHHHHHHHHHHHHHhcc--C
Confidence 7666677 6899999 99999999999999999999999999863 457889999999999999999999999999 7
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhhhc
Q 009677 503 GRISPSAILLSSVFFMIFLFFGSIIL 528 (529)
Q Consensus 503 ~~~p~~~~~~s~~~~~~~~~~~~~~~ 528 (529)
+++|+++++||++++++|+++|+.++
T Consensus 1095 gr~P~iv~v~s~ll~~~~sll~v~~~ 1120 (1135)
T PLN02248 1095 GRTPTIVYVWSGLLSITISLLWVAIS 1120 (1135)
T ss_pred CCCCeehHHHHHHHHHHHHHHheEec
Confidence 78899999999999999999998764
No 9
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=5.3e-126 Score=1037.08 Aligned_cols=506 Identities=31% Similarity=0.568 Sum_probs=461.0
Q ss_pred hHHHhhhhhhc-------C----C-CCccccccceEEEEecCCCchhhHHHhhhccCCcEEEEEccCCCCCCCCCcHHHH
Q 009677 2 FEEHVTKAVED-------G----E-YGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGAL 69 (529)
Q Consensus 2 ~~~~~~~~~~~-------~----~-~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaL 69 (529)
||+||+++..+ | + +.+++|||+||||++|+++++ .++.++|+++||+|||||+++||+|||||
T Consensus 200 ~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~iiqVll~~~~~~-----~~~~~lP~LVYvSREKrP~~~Hh~KAGAm 274 (756)
T PLN02190 200 LSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIVKVVWENKGGV-----GDEKEVPHLVYISREKRPNYLHHYKAGAM 274 (756)
T ss_pred HHHHHHhhccCCCCcccCCcccccCCCCCCCCccceEEEecCCCCc-----cccccCceEEEEeccCCCCCCcccccchh
Confidence 78899877421 1 1 578999999999999996542 24779999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCC-CceEEEccCceeccCCCcchHHHHHHHHHHHHHHH
Q 009677 70 NVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKIS-SSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQG 148 (529)
Q Consensus 70 N~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~-~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g 148 (529)
|+++|+||+|||+|||+|+|||||.|||++++++||||+|+..+ +++||||+||+|+ |+|+|++++||++.++|
T Consensus 275 NaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmCf~ld~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~~~G 349 (756)
T PLN02190 275 NFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYLGRG 349 (756)
T ss_pred HHHHHHhhhhccCCeEEEecCccccCchhHHHHhhhhhcCCCCCCCeeEEEeCchhhc-----cccCccceEEEEEeecc
Confidence 99999999999999999999999999999999999999998655 4899999999997 78999999999999999
Q ss_pred hhccCCcccccccceEecccccc-CCch------------------hhhhhccCCchhhHhhhhhhhcccCCCCCCchhh
Q 009677 149 MDGLKGPVLSGTGYYIKRESLYA-DFTH------------------TELKDTFGKSNVLINSLHQSYKQNNANGENFSNV 209 (529)
Q Consensus 149 ~d~~~~~~~~Gtg~v~RR~aL~g-~p~~------------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (529)
+||+|||+|+||||+|||+|||| +|+. .+..++||+|++|++|+..+..+.+. ..+.+.+
T Consensus 350 ldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~-~~~~~~~ 428 (756)
T PLN02190 350 IAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLSSVATREFLAEDSLAREFGNSKEMVKSVVDALQRKPN-PQNSLTN 428 (756)
T ss_pred ccccCCcccccCCcceEeeeecCCCcccccccccccccccccccchhhhhhhcCCcHHHHHHHHHHhccCCC-CccchHH
Confidence 99999999999999999999999 6653 12448899999999999887743332 2334578
Q ss_pred hHHhhccccccccccccccccccccCCCCccchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhccccc
Q 009677 210 LQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLT 289 (529)
Q Consensus 210 ~~~~a~~v~~c~ye~~t~wg~~iG~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~ 289 (529)
++++|++|+||.||++|+||+||||.|+|+|||+.||++||++||||+||+|+++++.|++|+++.+.+.||+|||+|++
T Consensus 429 ~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~TGl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~l 508 (756)
T PLN02190 429 SIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLI 508 (756)
T ss_pred HHHHHHhhcccCCCCCCchhhccCcccceeechHHHHHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhH
Confidence 99999999999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred cccccccCccccC-CCCCCHHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHhCCccccCCCchhHHHHHHHHHHHHHHH
Q 009677 290 DVGLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKH 368 (529)
Q Consensus 290 qv~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~l~~i~~l~y~~~P~~~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~ 368 (529)
|++++|+||++.+ .++|++.||++|++..+ | ++++|+++|+++|++||++|.+++|+. +|+.+++++++.+++++
T Consensus 509 qI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~-~~sip~l~Y~~lP~l~Ll~g~~i~P~~--~~~~~~~~l~~~~~~~~ 584 (756)
T PLN02190 509 EVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-C-LRSIPELIYCLLPAYCLLHNSALFPKG--VYLGIIVTLVGMHCLYT 584 (756)
T ss_pred HHHHhcCCCceeccCCCCCHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHcCCccccCc--cHHHHHHHHHHHHHHHH
Confidence 9999999999874 57999999999999877 7 999999999999999999999999974 67888888888999999
Q ss_pred HHHHHHhCCccchhhchhhHHHHHHHHHHHHHHHHHHHHHHcCCCcceeeccCccc-------------hhhhhhhcccc
Q 009677 369 LQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLD-------------KEQVKRYEMGQ 435 (529)
Q Consensus 369 ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~~ll~~l~~~~~~F~VTpK~~~-------------~~~~~~y~~~~ 435 (529)
++|++|+|.++++|||+||+|++.++++++++++++++|+||+++.+|+||.|..+ ++++++|++|+
T Consensus 585 l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~~lK~lg~s~~~F~vTsK~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (756)
T PLN02190 585 LWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDIILKLLGISKTVFIVTKKTMPETKSGSGSGPSQGEDDGPNSDSGK 664 (756)
T ss_pred HHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHHHHHHhccccceEEEeeccccccccccccccccccccchhhhcce
Confidence 99999999999999999999999999999999999999999999999999999754 33457889999
Q ss_pred eeecccchhhHHHHHHHHHHHHHHHHHHHHHHHc-----CCcchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchHHH
Q 009677 436 FDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAV-----GNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAI 510 (529)
Q Consensus 436 f~~~~~s~l~~P~~~l~~l~l~alv~gi~~~~~~-----g~~~~~~~~l~~~~w~v~~l~p~~~al~~r~~~~~~p~~~~ 510 (529)
|+|+ +||+++|.++++++|++|+++|+++++.. |.++. ++++++|+|+|++++||++||| ||||++||.|++
T Consensus 665 f~f~-~S~lfiP~tti~~~Nl~a~~~g~~~~~~~~~s~~~~~~~-l~q~~~~~~vv~~~~P~~~gl~-~kdkg~iP~s~~ 741 (756)
T PLN02190 665 FEFD-GSLYFLPGTFIVLVNLAALAGFLVGLQRSSYSHGGGGSG-LAEACGCILVVMLFLPFLKGLF-EKGKYGIPLSTL 741 (756)
T ss_pred eEec-ceehHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccc-HHHHHHHHHHHHHHHHHHHHHh-cCCCCCCChhHH
Confidence 9999 99999999999999999999999887642 44554 5999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 009677 511 LLSSVFFMIFLFFGS 525 (529)
Q Consensus 511 ~~s~~~~~~~~~~~~ 525 (529)
++|++|+++|++|.+
T Consensus 742 ~~s~~l~~~f~~~~~ 756 (756)
T PLN02190 742 SKAAFLAVLFVVFSV 756 (756)
T ss_pred HHHHHHHHHHHhccC
Confidence 999999999999853
No 10
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=5.1e-124 Score=1026.67 Aligned_cols=509 Identities=39% Similarity=0.739 Sum_probs=465.6
Q ss_pred hHHHhhhhhhcCC--------------------CCccccccceEEEEecCCCchhhHHHhhhccCCcEEEEEccCCCCCC
Q 009677 2 FEEHVTKAVEDGE--------------------YGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHL 61 (529)
Q Consensus 2 ~~~~~~~~~~~~~--------------------~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek~p~~~ 61 (529)
||.|||.++++|. +.+++|||+||||++|++++. |.++.++|+++|++|||||+++
T Consensus 203 ~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~dH~~ivqV~l~~~~~~----d~~g~~lP~lvYvsReKrp~~~ 278 (734)
T PLN02893 203 MKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQDHPTVIQVLLESGKDK----DITGHTMPNLIYVSREKSKNSP 278 (734)
T ss_pred HHHHHHHHHhcCcCchhhhhhcccccccccCcCCCCCCCCCceeeeeccCCCcc----chhhccCCceEEEeCCCCCCCC
Confidence 7899998864443 357899999999999998764 4467789999999999999999
Q ss_pred CCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHH
Q 009677 62 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSA 141 (529)
Q Consensus 62 ~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f 141 (529)
||+||||||+++|+|++|||||||+||||||++|||++++++||||+||+.++++|+||+||+|+|.+++|+|++++++|
T Consensus 279 Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vf 358 (734)
T PLN02893 279 HHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRL 358 (734)
T ss_pred cccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHH
Confidence 99999999999999999999999999999999988999999999999998899999999999999999999999999999
Q ss_pred HHHHHHHhhccCCcccccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhcccC-CCCCCchhhhHHhhcccccc
Q 009677 142 YCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNN-ANGENFSNVLQEETGVLASC 220 (529)
Q Consensus 142 ~~~~~~g~d~~~~~~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~v~~c 220 (529)
|+++++|+||+|||+||||||++||+||||.|.. +..+...+...+. ........+++++|.+|+||
T Consensus 359 f~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~sC 426 (734)
T PLN02893 359 FQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSS------------LILPEIPELNPDHLVDKSIKSQEVLALAHHVAGC 426 (734)
T ss_pred HHHHhhcccccCCceeeccceEEEHHHhcCCCcc------------ccchhhhhcccccccccccchHHHHHHhhhcccc
Confidence 9999999999999999999999999999984431 0000000111000 11122356789999999999
Q ss_pred ccccccccccccccCCCCccchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhccccccccccccCccc
Q 009677 221 SYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLL 300 (529)
Q Consensus 221 ~ye~~t~wg~~iG~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv~~~~~~p~~ 300 (529)
.||++|+||+++||.|+|+|||++||++||++||||+||+|+++++.|++|+|+.++++||+|||+|++|++++|+||++
T Consensus 427 ~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~ 506 (734)
T PLN02893 427 NYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPIT 506 (734)
T ss_pred ccccCCccccccceEeccccccHHHHHHHHhcCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchh
Confidence 99999999999999999999999999999999999999998788999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHhCCccccCCCchhHHHHHHHHHHHHHHHHHHHHHhCCccc
Q 009677 301 YGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIY 380 (529)
Q Consensus 301 ~~~~~l~~~qrl~y~~~~~~~~l~~i~~l~y~~~P~~~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~ 380 (529)
++.++|++.||++|++.++|+ +.++|+++|+++|++||++|++++|+++.+|+.+++++++++++++++|++|+|.+++
T Consensus 507 ~g~~~L~~~Qrl~Y~~~~~~~-~~slp~liY~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~ 585 (734)
T PLN02893 507 FGVKSIGLLMGLGYAHYAFWP-IWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQ 585 (734)
T ss_pred hcccCCCHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHh
Confidence 876899999999999999999 9999999999999999999999999999999999888889999999999999999999
Q ss_pred hhhchhhHHHHHHHHHHHHHHHHHHHHHHcCCCcceeeccCccchhhhhhhcccceeecccchhhHHHHHHHHHHHHHHH
Q 009677 381 AWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALL 460 (529)
Q Consensus 381 ~ww~~~~~w~i~~~~~~~~~~~~~ll~~l~~~~~~F~VTpK~~~~~~~~~y~~~~f~~~~~s~l~~P~~~l~~l~l~alv 460 (529)
+|||+||+|++.++++++++++++++|+||+++.+|+||+|+.++++.++|++|.|+|++++|+++|+++++++|++|++
T Consensus 586 ~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg~s~~~F~VT~K~~~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v 665 (734)
T PLN02893 586 RWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFL 665 (734)
T ss_pred hhcchheeeehHHHHHHHHHHHHHHHHHhcccCCceeecCCCcccccccccccceeeecccchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987777789999999999779999999999999999999
Q ss_pred HHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHHHHHhhhh
Q 009677 461 CGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSII 527 (529)
Q Consensus 461 ~gi~~~~~~g~~~~~~~~l~~~~w~v~~l~p~~~al~~r~~~~~~p~~~~~~s~~~~~~~~~~~~~~ 527 (529)
+|+++++..+.++.+++++++++|++++++||++|++.||||++||+++++||++||++++...+.+
T Consensus 666 ~Gi~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~dkg~~P~~v~~~s~~l~~~~~~~~~~~ 732 (734)
T PLN02893 666 WGIAQIFRQRNLEGLFLQMFLAGFAVVNCWPIYEAMVLRTDDGKLPVKITLISIVLAWALYLASSFA 732 (734)
T ss_pred HHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccHHHHHHHHHHHHHHHHhhh
Confidence 9999998766778889999999999999999999999999999999999999999999998876543
No 11
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=9.2e-58 Score=516.46 Aligned_cols=391 Identities=24% Similarity=0.320 Sum_probs=310.6
Q ss_pred ccccccc-eEEEEe-cCCCchhhHHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCC
Q 009677 17 NSQNHST-IIEIIQ-ETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYC 94 (529)
Q Consensus 17 ~~~~h~~-~i~v~~-~~~~~~~~~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~ 94 (529)
..+|||. -++|++ ||++++++ .+..++ .++.|++|+++ .|+||||+|+|+++ ++||||+++|||++|
T Consensus 284 l~~dYP~~k~EViVVDDgS~D~t--~~la~~-~~v~yI~R~~n----~~gKAGnLN~aL~~----a~GEyIavlDAD~ip 352 (852)
T PRK11498 284 LGIDWPKDKLNIWILDDGGREEF--RQFAQE-VGVKYIARPTH----EHAKAGNINNALKY----AKGEFVAIFDCDHVP 352 (852)
T ss_pred HhccCCCCceEEEEEeCCCChHH--HHHHHH-CCcEEEEeCCC----CcchHHHHHHHHHh----CCCCEEEEECCCCCC
Confidence 4578885 345544 44433332 112223 37999999876 58999999999999 999999999999999
Q ss_pred CCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcch-------HHHHHHHHHHHHHHHhhccCCcccccccceEecc
Q 009677 95 NDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDI-------YDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRE 167 (529)
Q Consensus 95 ~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~-------~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~ 167 (529)
+ |++|++++++|.+ +|++|+||+||.|+|.++-.. ..++.+.||+.++.|.+.++++++||+++++||+
T Consensus 353 ~-pdfL~~~V~~f~~---dP~VglVQtp~~f~n~dp~~rnl~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRRe 428 (852)
T PRK11498 353 T-RSFLQMTMGWFLK---DKKLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRK 428 (852)
T ss_pred C-hHHHHHHHHHHHh---CCCeEEEEcceeccCCchHHHhhHHHhhcccchhHHHHHHHhHHHhhcccccccceeeeEHH
Confidence 8 9999999998864 689999999999998642110 1234567999999999999999999999999999
Q ss_pred ccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCCCccchHHHH
Q 009677 168 SLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSVSEDLFTG 246 (529)
Q Consensus 168 aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~svtED~~t~ 246 (529)
|+ +|+| |+++++|||++++
T Consensus 429 aL------------------------------------------------------------eeVGGfd~~titED~dls 448 (852)
T PRK11498 429 PL------------------------------------------------------------DEIGGIAVETVTEDAHTS 448 (852)
T ss_pred HH------------------------------------------------------------HHhcCCCCCccCccHHHH
Confidence 99 6897 9999999999999
Q ss_pred HHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhccccccccccccCccccCCCCCCHHHHHHHHHHhHhhHHhHH
Q 009677 247 FILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCL 326 (529)
Q Consensus 247 ~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~l~~i 326 (529)
+++|++||+++|+++ +.+.|++|+|++++++||.||++|++|++. +++|++. +++++.||++|+++++|+ +.++
T Consensus 449 lRL~~~Gyrv~yl~~--~~a~glaPesl~~~~~QR~RWarG~lQi~r-~~~pl~~--~gL~~~qRl~y~~~~l~~-l~g~ 522 (852)
T PRK11498 449 LRLHRRGYTSAYMRI--PQAAGLATESLSAHIGQRIRWARGMVQIFR-LDNPLTG--KGLKLAQRLCYANAMLHF-LSGI 522 (852)
T ss_pred HHHHHcCCEEEEEec--cceeEECCCCHHHHHHHHHHHHHHHHHHHH-HhChhcc--CCCCHHHHHHHHHHHHHH-HHHH
Confidence 999999999999987 788999999999999999999999999986 6789773 799999999999999888 9999
Q ss_pred HHHHHHHHHHHHHHhCCccccCCCchhHHHHHHHHHHHHHHH-HHHHHHhCCccchhhchhhHHHHHHHHHHHHHHHHHH
Q 009677 327 PLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKH-LQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTI 405 (529)
Q Consensus 327 ~~l~y~~~P~~~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~-ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~~l 405 (529)
+.++|+++|++|+++|+.++. .++..++.|+ +++++.. +......|.....||++ +++++.++.. ....+
T Consensus 523 ~~l~~l~~Pl~~l~~gi~~i~---a~~~~i~~y~-lP~~~~~~l~~~~~~g~~r~~~wse----iye~v~a~~l-~~~~~ 593 (852)
T PRK11498 523 PRLIFLTAPLAFLLLHAYIIY---APALMIALFV-LPHMIHASLTNSRIQGKYRHSFWSE----IYETVLAWYI-APPTT 593 (852)
T ss_pred HHHHHHHHHHHHHHhCChhee---CChHHHHHHH-HHHHHHHHHHHHHhcCcchHhHHHH----HHHHHHHHHH-HHHHH
Confidence 999999999999999998774 2344444443 3333333 33333445556678877 6777755444 44566
Q ss_pred HHHHcCCCcceeeccCccchhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHHHcC--CcchhHHHHHHHH
Q 009677 406 LKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSL 483 (529)
Q Consensus 406 l~~l~~~~~~F~VTpK~~~~~~~~~y~~~~f~~~~~s~l~~P~~~l~~l~l~alv~gi~~~~~~g--~~~~~~~~l~~~~ 483 (529)
..++++++.+|+||||++..++ +.|+|+ +..|+++++++|++|+++|++++.... ....+..+++|++
T Consensus 594 ~~ll~p~~~~F~VTpKg~~~~~------~~~~~~----~~~P~~~L~~L~l~gl~~g~~r~~~~~~~~~~~~~~~~~W~~ 663 (852)
T PRK11498 594 VALFNPHKGKFNVTAKGGLVEE------EYVDWV----ISRPYIFLVLLNLVGVAVGIWRYFYGPPNEILTVIVSLVWVF 663 (852)
T ss_pred HHHcCccCCCcccCCCCccccc------cceehH----HHHHHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhhHHHHH
Confidence 6688999999999999976543 567776 567899999999999999999987532 1234556778888
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCch
Q 009677 484 YILIINFAIVEGMIVRKDKGRISP 507 (529)
Q Consensus 484 w~v~~l~p~~~al~~r~~~~~~p~ 507 (529)
++++.+...+.+.++++++++-|+
T Consensus 664 ~nl~~l~~a~~~~~e~~~~r~~~r 687 (852)
T PRK11498 664 YNLIILGGAVAVSVESKQVRRSHR 687 (852)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCce
Confidence 888888888888888888776664
No 12
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=5.3e-57 Score=510.32 Aligned_cols=364 Identities=24% Similarity=0.327 Sum_probs=306.2
Q ss_pred CcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceec
Q 009677 47 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFH 126 (529)
Q Consensus 47 p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~ 126 (529)
.++.|++|+++ .|+||||||+|+++ ++||||+++|||++|+ ||+|++++++|.+ +|++|+||+||.|+
T Consensus 202 ~~v~yi~r~~n----~~~KAgnLN~al~~----a~gd~Il~lDAD~v~~-pd~L~~~v~~f~~---dp~v~~Vqtp~~f~ 269 (713)
T TIGR03030 202 LGVNYITRPRN----VHAKAGNINNALKH----TDGELILIFDADHVPT-RDFLQRTVGWFVE---DPKLFLVQTPHFFV 269 (713)
T ss_pred cCcEEEECCCC----CCCChHHHHHHHHh----cCCCEEEEECCCCCcC-hhHHHHHHHHHHh---CCCEEEEeCCeecc
Confidence 48999999887 58999999999999 9999999999999998 9999999999974 68999999999999
Q ss_pred cCCCc-------chHHHHHHHHHHHHHHHhhccCCcccccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhccc
Q 009677 127 NINKY-------DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQN 199 (529)
Q Consensus 127 n~~~~-------d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~ 199 (529)
|.++- +...++...||+.++.|.|.++++++||+|+++||+|+
T Consensus 270 ~p~~~~~nl~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al------------------------------ 319 (713)
T TIGR03030 270 SPDPIERNLGTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREAL------------------------------ 319 (713)
T ss_pred CCCHHhhhhHHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHH------------------------------
Confidence 86421 12234567899999999999999999999999999999
Q ss_pred CCCCCCchhhhHHhhccccccccccccccccccc-cCCCCccchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHH
Q 009677 200 NANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLL 278 (529)
Q Consensus 200 ~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~ 278 (529)
+++| |++++++||++++++||++||+++|+++ +.+.|++|+|+++++
T Consensus 320 ------------------------------~~iGGf~~~~vtED~~l~~rL~~~G~~~~y~~~--~~~~g~~p~sl~~~~ 367 (713)
T TIGR03030 320 ------------------------------DEIGGIAGETVTEDAETALKLHRRGWNSAYLDR--PLIAGLAPETLSGHI 367 (713)
T ss_pred ------------------------------HHcCCCCCCCcCcHHHHHHHHHHcCCeEEEecc--ccccccCCCCHHHHH
Confidence 6887 9999999999999999999999999997 788999999999999
Q ss_pred hhhhhhccccccccccccCccccCCCCCCHHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHhCCccccCCCchhHHHHH
Q 009677 279 IQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFS 358 (529)
Q Consensus 279 ~Qr~RWa~G~~qv~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~l~~i~~l~y~~~P~~~ll~g~~~~p~~~~~~~~~~~ 358 (529)
+||.||++|++|+++ ..+|++. +++++.||++|+++++|+ +.+++.++|+++|++++++|+++++.. +..++.
T Consensus 368 ~Qr~RWa~G~~qi~~-~~~pl~~--~gl~~~qrl~y~~~~~~~-~~~~~~~~~~~~P~~~l~~~~~~~~~~---~~~~~~ 440 (713)
T TIGR03030 368 GQRIRWAQGMMQIFR-LDNPLLK--RGLSFPQRLCYLNAMLFW-FFPLPRVIFLTAPLAYLFFGLNIFVAS---ALEILA 440 (713)
T ss_pred HHHHHHhcChHHHHh-hhCcccc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCcceeCC---HHHHHH
Confidence 999999999999987 4588773 799999999999999998 999999999999999999999998742 233333
Q ss_pred HHHHHHHHHHHHHHH-HhCCccchhhchhhHHHHHHHHHHHHHHHHHHHHHHcCCCcceeeccCccchhhhhhhccccee
Q 009677 359 FIFISAICKHLQEVI-STGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFD 437 (529)
Q Consensus 359 ~~~~~~~~~~ll~~~-~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~~ll~~l~~~~~~F~VTpK~~~~~~~~~y~~~~f~ 437 (529)
|+ +++++.+++.+. ..|.....||++ +++++. .++.+.+++.+++++++.+|+||||++..++ +.
T Consensus 441 ~~-lp~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~------~~-- 506 (713)
T TIGR03030 441 YA-LPHMLHSLLTNSYLFGRVRWPFWSE----VYETVL-AVYLLPPVLVTLLNPKKPKFNVTPKGELLDE------DY-- 506 (713)
T ss_pred HH-HHHHHHHHHHHHHHcCCeecchHHH----HHHHHH-HHHHHHHHHHHHhCcCCCCceecCCCccccc------cc--
Confidence 33 555566665543 446556788987 666664 4577777888889999999999999976543 11
Q ss_pred ecccchhhHHHHHHHHHHHHHHHHHHHHHHHcC-CcchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchH
Q 009677 438 FQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG-NWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPS 508 (529)
Q Consensus 438 ~~~~s~l~~P~~~l~~l~l~alv~gi~~~~~~g-~~~~~~~~l~~~~w~v~~l~p~~~al~~r~~~~~~p~~ 508 (529)
.+++++|+++++++|++|+++|++++...+ ....+..+++|++++++.+...+.+.++|+++++-|+.
T Consensus 507 ---~~~~~~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~n~~~~~~~~~~~~~r~QrR~~~Rv 575 (713)
T TIGR03030 507 ---FSPLSRPYLILFALILAGLAFGLYRIYGYPIERGVLLVVLGWNLLNLILLGAALAVVAERRQRRSSPRI 575 (713)
T ss_pred ---cchHHHHHHHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHccCCCCCCcccE
Confidence 236899999999999999999999986432 22445678888888888888888899999999887764
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=5e-31 Score=295.37 Aligned_cols=222 Identities=15% Similarity=0.124 Sum_probs=172.3
Q ss_pred CCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCcee
Q 009677 46 MPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKF 125 (529)
Q Consensus 46 ~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f 125 (529)
.+++.|.+|++| .|+||||+|++++..+ .++|||+++|||++++ ||++++++.+|.. ||++|+||+|+.+
T Consensus 191 ~~~i~yr~R~~n----~~~KaGNl~~~~~~~~--~~~eyivvLDADs~m~-~d~L~~lv~~m~~---dP~vGlVQt~~~~ 260 (691)
T PRK05454 191 EGRIFYRRRRRN----VGRKAGNIADFCRRWG--GAYDYMVVLDADSLMS-GDTLVRLVRLMEA---NPRAGLIQTLPVA 260 (691)
T ss_pred CCcEEEEECCcC----CCccHHHHHHHHHhcC--CCcCEEEEEcCCCCCC-HHHHHHHHHHHhh---CcCEEEEeCCccC
Confidence 358999999887 5789999999999966 6789999999999998 9999999999863 6899999999999
Q ss_pred ccCCCcchHHHHH----HHHHHHHHHHhhccC--CcccccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhccc
Q 009677 126 HNINKYDIYDGRF----RSAYCVQWQGMDGLK--GPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQN 199 (529)
Q Consensus 126 ~n~~~~d~~~~~~----~~f~~~~~~g~d~~~--~~~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~ 199 (529)
.|.+ ..+++-+ .++......|.+.++ ...|+|+|+++||+|+..
T Consensus 261 ~n~~--slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~---------------------------- 310 (691)
T PRK05454 261 VGAD--TLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAE---------------------------- 310 (691)
T ss_pred cCCC--CHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHH----------------------------
Confidence 8864 4555322 234445667877766 346899999999999831
Q ss_pred CCCCCCchhhhHHhhccccccccccccccccccc-cCCCCccchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHH
Q 009677 200 NANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLL 278 (529)
Q Consensus 200 ~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~ 278 (529)
+|....- .+.| |..++++||+++|.+++++||+++|+++ .+.+++++|+|+.+++
T Consensus 311 -------------------~~glp~L----~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd-~~~~~ee~P~tl~~~~ 366 (691)
T PRK05454 311 -------------------HCGLPPL----PGRGPFGGHILSHDFVEAALMRRAGWGVWLAPD-LPGSYEELPPNLLDEL 366 (691)
T ss_pred -------------------hcCCccc----cccCCCCCCcccHHHHHHHHHHHCCCEEEEcCc-cccccccCCCCHHHHH
Confidence 1111110 2344 8889999999999999999999999986 3468999999999999
Q ss_pred hhhhhhccccccccccccCccccCCCCCCHHHHHHHHHHhHhhHHhHHHH-HHHHHHHHHH
Q 009677 279 IQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPL-WCLATLPQLC 338 (529)
Q Consensus 279 ~Qr~RWa~G~~qv~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~l~~i~~-l~y~~~P~~~ 338 (529)
+||.||++|++|.+. . +. .+++++.+|++|+...+.+ +.+... +++++.|++.
T Consensus 367 ~qr~RW~~G~lQ~l~--~---l~-~~gl~~~~R~~~l~g~~~y-l~~P~wll~l~l~~~~~ 420 (691)
T PRK05454 367 KRDRRWCQGNLQHLR--L---LL-AKGLHPVSRLHFLTGIMSY-LSAPLWLLFLLLGTALA 420 (691)
T ss_pred HHHHHHHhchHHHHH--H---HH-hcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 999999999999873 2 22 3789999999988766655 554433 3344444433
No 14
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=4.9e-32 Score=271.72 Aligned_cols=181 Identities=17% Similarity=0.199 Sum_probs=147.0
Q ss_pred CCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCcee
Q 009677 46 MPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKF 125 (529)
Q Consensus 46 ~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f 125 (529)
.++++|++|+++ .|+||||||+++...+ +++|||+++|||+.++ |++|++++.+|.. +|++|+||+|+.+
T Consensus 66 ~~~v~~~~r~~~----~g~Kag~l~~~~~~~~--~~~~~i~~~DaD~~~~-p~~l~~~v~~~~~---~~~vg~vq~~~~~ 135 (254)
T cd04191 66 QGRIYYRRRREN----TGRKAGNIADFCRRWG--SRYDYMVVLDADSLMS-GDTIVRLVRRMEA---NPRAGIIQTAPKL 135 (254)
T ss_pred CCcEEEEEcCCC----CCccHHHHHHHHHHhC--CCCCEEEEEeCCCCCC-HHHHHHHHHHHHh---CCCEEEEeCCcee
Confidence 578999999988 5899999999998743 6889999999999998 9999999999973 5999999999999
Q ss_pred ccCCCcchHHHH----HHHHHHHHHHHhhccCC--cccccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhccc
Q 009677 126 HNINKYDIYDGR----FRSAYCVQWQGMDGLKG--PVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQN 199 (529)
Q Consensus 126 ~n~~~~d~~~~~----~~~f~~~~~~g~d~~~~--~~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~ 199 (529)
.|.+ ..+.+- ...|...++.|++.+++ .+|+|+++++||+||.. .
T Consensus 136 ~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~---------~------------------ 186 (254)
T cd04191 136 IGAE--TLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFME---------H------------------ 186 (254)
T ss_pred ECCC--CHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHH---------h------------------
Confidence 9874 333322 34455667778877654 57899999999999831 0
Q ss_pred CCCCCCchhhhHHhhccccccccccccccccccc-cCCCCccchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHH
Q 009677 200 NANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLL 278 (529)
Q Consensus 200 ~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~ 278 (529)
|..++ - .+.| |..++++||+++|++++.+||+++|.++ ...+++++|+|+++++
T Consensus 187 --------------------~~~~~---i-~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~-~~~~~~~~p~~~~~~~ 241 (254)
T cd04191 187 --------------------CALPV---L-PGRPPFGGHILSHDFVEAALMRRAGWEVRLAPD-LEGSYEECPPTLIDFL 241 (254)
T ss_pred --------------------cCCcc---c-cCCCCCCCCeecHHHHHHHHHHHcCCEEEEccC-CcceEeECCCCHHHHH
Confidence 00000 0 2344 8889999999999999999999999986 2336899999999999
Q ss_pred hhhhhhcccccc
Q 009677 279 IQGTRWGSGLTD 290 (529)
Q Consensus 279 ~Qr~RWa~G~~q 290 (529)
+||.||++|++|
T Consensus 242 ~qr~RW~~G~~q 253 (254)
T cd04191 242 KRDRRWCQGNLQ 253 (254)
T ss_pred HHHHHHHhhcCc
Confidence 999999999998
No 15
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.97 E-value=1.7e-29 Score=272.22 Aligned_cols=203 Identities=19% Similarity=0.163 Sum_probs=162.9
Q ss_pred CCccccccceEEEEecCCCchhh--HHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCC
Q 009677 15 YGNSQNHSTIIEIIQETFGESET--IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDM 92 (529)
Q Consensus 15 ~~~~~~h~~~i~v~~~~~~~~~~--~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~ 92 (529)
+..+|+||+.--|+++|++++++ +.++...+.|++.++.++++ ++||+|+|+|++. +++|+++++|||+
T Consensus 96 sll~q~yp~~eIivVdDgs~D~t~~~~~~~~~~~~~v~vv~~~~n-----~Gka~AlN~gl~~----a~~d~iv~lDAD~ 166 (444)
T PRK14583 96 AALAQTYTNIEVIAINDGSSDDTAQVLDALLAEDPRLRVIHLAHN-----QGKAIALRMGAAA----ARSEYLVCIDGDA 166 (444)
T ss_pred HHHcCCCCCeEEEEEECCCCccHHHHHHHHHHhCCCEEEEEeCCC-----CCHHHHHHHHHHh----CCCCEEEEECCCC
Confidence 34578888743334444444433 44555667889988887654 5799999999999 8999999999999
Q ss_pred CCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHH----HHHHHHHHHHHHhhccCCccc-ccccceEecc
Q 009677 93 YCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDG----RFRSAYCVQWQGMDGLKGPVL-SGTGYYIKRE 167 (529)
Q Consensus 93 ~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~----~~~~f~~~~~~g~d~~~~~~~-~Gtg~v~RR~ 167 (529)
+++ ||++++.+..|.+ +|+++.||+.....|. +..++. +...+++.+.++.+..+..++ +|+++++||+
T Consensus 167 ~~~-~d~L~~lv~~~~~---~~~~g~v~g~~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~ 240 (444)
T PRK14583 167 LLD-KNAVPYLVAPLIA---NPRTGAVTGNPRIRTR--STLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRR 240 (444)
T ss_pred CcC-HHHHHHHHHHHHh---CCCeEEEEccceecCC--CcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHH
Confidence 997 9999999998864 6899999998776654 233332 334455556666666666554 6999999999
Q ss_pred ccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCCCccchHHHH
Q 009677 168 SLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSVSEDLFTG 246 (529)
Q Consensus 168 aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~svtED~~t~ 246 (529)
++ +++| |+.++++||++++
T Consensus 241 al------------------------------------------------------------~~vGg~~~~~i~ED~dl~ 260 (444)
T PRK14583 241 AL------------------------------------------------------------ADVGYWSPDMITEDIDIS 260 (444)
T ss_pred HH------------------------------------------------------------HHcCCCCCCcccccHHHH
Confidence 99 6898 9999999999999
Q ss_pred HHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhcccccccccc
Q 009677 247 FILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLS 294 (529)
Q Consensus 247 ~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv~~~ 294 (529)
+|++.+||++.|+++ +.+++++|+|++++++||.||++|.+|++++
T Consensus 261 ~rl~~~G~~i~~~p~--a~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~ 306 (444)
T PRK14583 261 WKLQLKHWSVFFEPR--GLCWILMPETLRGLWKQRLRWAQGGAEVFLK 306 (444)
T ss_pred HHHHHcCCeEEEeec--cEEeeeCCCCHHHHHHHHHHHhCcHHHHHHH
Confidence 999999999999996 7899999999999999999999999999874
No 16
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.96 E-value=6.6e-29 Score=264.84 Aligned_cols=206 Identities=24% Similarity=0.226 Sum_probs=159.8
Q ss_pred CCccccccceEEEEecCCCch--hhHHHhhhccC-CcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCC
Q 009677 15 YGNSQNHSTIIEIIQETFGES--ETIRQADLVEM-PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCD 91 (529)
Q Consensus 15 ~~~~~~h~~~i~v~~~~~~~~--~~~~~~~~~~~-p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD 91 (529)
+..++|||..--+++++++++ .+++.+...+. |++..+..++ ++++|+||+|.++.. +++|+|+++|||
T Consensus 76 s~~~~dyp~~evivv~d~~~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~gK~~al~~~l~~----~~~d~V~~~DaD 147 (439)
T COG1215 76 SLLSQDYPRYEVIVVDDGSTDETYEILEELGAEYGPNFRVIYPEK----KNGGKAGALNNGLKR----AKGDVVVILDAD 147 (439)
T ss_pred HHHhCCCCCceEEEECCCCChhHHHHHHHHHhhcCcceEEEeccc----cCccchHHHHHHHhh----cCCCEEEEEcCC
Confidence 457899998443444554444 33556666676 5666663312 258999999999999 889999999999
Q ss_pred CCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHHH-----HHHHhhccCCcccccccceEec
Q 009677 92 MYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCV-----QWQGMDGLKGPVLSGTGYYIKR 166 (529)
Q Consensus 92 ~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~-----~~~g~d~~~~~~~~Gtg~v~RR 166 (529)
++|+ ||+|++++.+|.| ++..+.+|.|+.+.+.++....+......|.. ...+.+.....+++|++.++||
T Consensus 148 ~~~~-~d~l~~~~~~f~~---~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr 223 (439)
T COG1215 148 TVPE-PDALRELVSPFED---PPVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRR 223 (439)
T ss_pred CCCC-hhHHHHHHhhhcC---CCeeEEeCCceeeecCChhhhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEH
Confidence 9998 9999999999997 34557999999887653222233222222222 2223333345678999999999
Q ss_pred cccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCCCccchHHH
Q 009677 167 ESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSVSEDLFT 245 (529)
Q Consensus 167 ~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~svtED~~t 245 (529)
+|| +++| |...++|||.++
T Consensus 224 ~aL------------------------------------------------------------~~~g~~~~~~i~ED~~l 243 (439)
T COG1215 224 SAL------------------------------------------------------------EEVGGWLEDTITEDADL 243 (439)
T ss_pred HHH------------------------------------------------------------HHhCCCCCCceeccHHH
Confidence 999 6887 999999999999
Q ss_pred HHHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhcccccccccc
Q 009677 246 GFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLS 294 (529)
Q Consensus 246 ~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv~~~ 294 (529)
++++|.+|||+.|+++ +.+++++|+|+.++++||.||++|++|++..
T Consensus 244 t~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~g~~~~~~~ 290 (439)
T COG1215 244 TLRLHLRGYRVVYVPE--AIVWTEAPETLKELWRQRLRWARGGLQVLLL 290 (439)
T ss_pred HHHHHHCCCeEEEeec--ceEeeeCcccHHHHHHHHHHHHcccceeeeh
Confidence 9999999999999997 7899999999999999999999999999874
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.96 E-value=1.5e-27 Score=254.69 Aligned_cols=202 Identities=20% Similarity=0.189 Sum_probs=158.3
Q ss_pred CccccccceEEEEecCCCchhh--HHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCC
Q 009677 16 GNSQNHSTIIEIIQETFGESET--IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY 93 (529)
Q Consensus 16 ~~~~~h~~~i~v~~~~~~~~~~--~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~ 93 (529)
..+|+||..--+++||++++++ ..++...+.|++.+++++++ .+||+|+|.|++. +++||++++|||.+
T Consensus 76 l~~q~yp~~eiiVvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n-----~Gka~aln~g~~~----a~~d~i~~lDaD~~ 146 (420)
T PRK11204 76 LLALRYPNYEVIAINDGSSDNTGEILDRLAAQIPRLRVIHLAEN-----QGKANALNTGAAA----ARSEYLVCIDGDAL 146 (420)
T ss_pred HHhCCCCCeEEEEEECCCCccHHHHHHHHHHhCCcEEEEEcCCC-----CCHHHHHHHHHHH----cCCCEEEEECCCCC
Confidence 4568888543344455444432 44555667899999987665 5799999999999 89999999999999
Q ss_pred CCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHH----HHHHHHHHHHhhccCCccc-ccccceEeccc
Q 009677 94 CNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRF----RSAYCVQWQGMDGLKGPVL-SGTGYYIKRES 168 (529)
Q Consensus 94 ~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~----~~f~~~~~~g~d~~~~~~~-~Gtg~v~RR~a 168 (529)
++ ||+|++++..|.+ +|+++.||+.....|.. ...+..+ ...+.....+....+...+ +|+++++||++
T Consensus 147 ~~-~d~L~~l~~~~~~---~~~v~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~ 220 (420)
T PRK11204 147 LD-PDAAAYMVEHFLH---NPRVGAVTGNPRIRNRS--TLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSA 220 (420)
T ss_pred CC-hhHHHHHHHHHHh---CCCeEEEECCceeccch--hHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHH
Confidence 98 9999999999863 68999999988776542 3333222 2222333333343444433 69999999999
Q ss_pred cccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCCCccchHHHHH
Q 009677 169 LYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSVSEDLFTGF 247 (529)
Q Consensus 169 L~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~svtED~~t~~ 247 (529)
+ +++| |+++.++||+++++
T Consensus 221 l------------------------------------------------------------~~vgg~~~~~~~ED~~l~~ 240 (420)
T PRK11204 221 L------------------------------------------------------------HEVGYWSTDMITEDIDISW 240 (420)
T ss_pred H------------------------------------------------------------HHhCCCCCCcccchHHHHH
Confidence 9 6887 99999999999999
Q ss_pred HHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhcccccccccc
Q 009677 248 ILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLS 294 (529)
Q Consensus 248 ~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv~~~ 294 (529)
|++++||++.|+++ +.++++.|+|++++++||.||++|++|.+++
T Consensus 241 rl~~~G~~i~~~p~--~~~~~~~p~t~~~~~~Qr~RW~~G~~~~l~~ 285 (420)
T PRK11204 241 KLQLRGWDIRYEPR--ALCWILMPETLKGLWKQRLRWAQGGAEVLLK 285 (420)
T ss_pred HHHHcCCeEEeccc--cEEEeECcccHHHHHHHHHHHhcCHHHHHHH
Confidence 99999999999997 7899999999999999999999999999873
No 18
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.94 E-value=6.3e-25 Score=238.73 Aligned_cols=229 Identities=15% Similarity=0.072 Sum_probs=155.7
Q ss_pred ccccccceEEEEe-cCCCchhh--HHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCC--CCCC---CEEEEe
Q 009677 17 NSQNHSTIIEIIQ-ETFGESET--IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGV--ISNS---PYILGL 88 (529)
Q Consensus 17 ~~~~h~~~i~v~~-~~~~~~~~--~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~--~s~g---~~i~il 88 (529)
..+|||.. +|++ +++++++| +.++...++|+++.+. .++++ .++||+|||++++..-. -..| |+|+++
T Consensus 90 ~~ldY~~~-eIiVv~d~ndd~T~~~v~~l~~~~p~v~~vv-~~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~ 165 (504)
T PRK14716 90 ATLDYENY-RIFVGTYPNDPATLREVDRLAARYPRVHLVI-VPHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLH 165 (504)
T ss_pred HcCCCCCe-EEEEEECCCChhHHHHHHHHHHHCCCeEEEE-eCCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEE
Confidence 45688764 4444 33444433 4455567789877655 23332 26899999999976210 0234 999999
Q ss_pred CCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHH-H---HHHHHHHhhccCCcc-cccccce
Q 009677 89 DCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRS-A---YCVQWQGMDGLKGPV-LSGTGYY 163 (529)
Q Consensus 89 DaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~-f---~~~~~~g~d~~~~~~-~~Gtg~v 163 (529)
|||.+++ |++|+....++ ++.++||.|....+.+.+...+..... | +...+..++.+++++ ++|+|+.
T Consensus 166 DAD~~v~-Pd~Lr~~~~~~------~~~~~VQ~pv~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~a 238 (504)
T PRK14716 166 DAEDVIH-PLELRLYNYLL------PRHDFVQLPVFSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTA 238 (504)
T ss_pred cCCCCcC-ccHHHHHHhhc------CCCCEEecceeccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEE
Confidence 9999998 99998754433 345689999877664433222221111 2 223345678888776 5899999
Q ss_pred EeccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhcccccccccccccccccc-------ccCC
Q 009677 164 IKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEV-------GILY 236 (529)
Q Consensus 164 ~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~i-------G~~~ 236 (529)
+||++| +++ +|+.
T Consensus 239 fRR~aL------------------------------------------------------------e~l~~~~GG~~fd~ 258 (504)
T PRK14716 239 FSRRAL------------------------------------------------------------ERLAAERGGQPFDS 258 (504)
T ss_pred eEHHHH------------------------------------------------------------HHHHhhcCCCCCCC
Confidence 999999 233 2999
Q ss_pred CCccchHHHHHHHHhCCCeEEEeCCCC-------------CceecccCCCHHHHHhhhhhhcccc-ccccccc-cCcccc
Q 009677 237 QSVSEDLFTGFILHCKGWTSTYLTPFR-------------PQFLGTSTTNLNDLLIQGTRWGSGL-TDVGLSR-FCPLLY 301 (529)
Q Consensus 237 ~svtED~~t~~~l~~~Gwrs~y~~~~~-------------~~~~g~aP~~l~~~~~Qr~RWa~G~-~qv~~~~-~~p~~~ 301 (529)
+++|||+++|++++.+|||++|++... .+.++++|+|++++++||.||++|. +|...+. ..-.+.
T Consensus 259 ~sLTED~dLglRL~~~G~rv~y~p~ai~~~~~~~~~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~~~~~ 338 (504)
T PRK14716 259 DSLTEDYDIGLRLKRAGFRQIFVRVRADDTTDRPDRRGEPIATREFFPDTFKAAVRQKARWIYGIAFQGWERLGWKGPAA 338 (504)
T ss_pred CCcchHHHHHHHHHHCCCEEEEecccccccccccccccccccccccCccCHHHHHHHHHHHHhchHHhhHHhcCCCCchh
Confidence 999999999999999999999998620 1356889999999999999999995 7875311 111111
Q ss_pred CCCCCCHHHHHHHHHH
Q 009677 302 GPSRMSLLQSMCYGEL 317 (529)
Q Consensus 302 ~~~~l~~~qrl~y~~~ 317 (529)
.+.+.+++|......
T Consensus 339 -~~~~~~rdr~~~~~~ 353 (504)
T PRK14716 339 -TKYMLWRDRKGLLTN 353 (504)
T ss_pred -hhhhHHHHHHHHHHH
Confidence 245677788776544
No 19
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.94 E-value=4.1e-25 Score=238.00 Aligned_cols=251 Identities=16% Similarity=0.113 Sum_probs=172.3
Q ss_pred Cccccccce-EEEEe-cCCCchhh--HHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCC
Q 009677 16 GNSQNHSTI-IEIIQ-ETFGESET--IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCD 91 (529)
Q Consensus 16 ~~~~~h~~~-i~v~~-~~~~~~~~--~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD 91 (529)
..+|++|.- ++|++ ||++++++ +.++...+.|++..+.-++ .++||+|+|+|++. +++|||+++|||
T Consensus 71 l~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~v~~~~~-----~~Gka~AlN~gl~~----s~g~~v~~~DaD 141 (439)
T TIGR03111 71 IYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLSLRYMNS-----DQGKAKALNAAIYN----SIGKYIIHIDSD 141 (439)
T ss_pred HHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeEEEEeCC-----CCCHHHHHHHHHHH----ccCCEEEEECCC
Confidence 456888862 44444 44444433 3344456678765544333 37899999999999 899999999999
Q ss_pred CCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCC----cch---HHHHHHHHHHHH---HH--Hh-hccCCcc-c
Q 009677 92 MYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINK----YDI---YDGRFRSAYCVQ---WQ--GM-DGLKGPV-L 157 (529)
Q Consensus 92 ~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~----~d~---~~~~~~~f~~~~---~~--g~-d~~~~~~-~ 157 (529)
++++ ||++++++..|.+ +|+++.|+..+.-. .+. ... +.... .+++.. .. .. ...+..+ +
T Consensus 142 ~~~~-~d~L~~l~~~f~~---~~~v~~v~g~~~~~-~~~~~~~~~~~~~~~~~~-~~~~y~~~~l~~r~~~s~~~~~~~~ 215 (439)
T TIGR03111 142 GKLH-KDAIKNMVTRFEN---NPDIHAMTGVILTD-KELIEKTKGRFLKLIRRC-EYFEYAQAFLAGRNFESQVNSLFTL 215 (439)
T ss_pred CCcC-hHHHHHHHHHHHh---CCCeEEEEeEEecC-chhhhhhcchhhhHhHHh-HHHHHHHHHHhhhHHHHhcCCeEEE
Confidence 9997 9999999999973 57787776544221 100 000 11111 112211 11 11 2223333 3
Q ss_pred ccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCC
Q 009677 158 SGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILY 236 (529)
Q Consensus 158 ~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~ 236 (529)
.|+++++||+++ +++| |+.
T Consensus 216 sGa~~~~Rr~~l------------------------------------------------------------~~vggf~~ 235 (439)
T TIGR03111 216 SGAFSAFRRETI------------------------------------------------------------LKTQLYNS 235 (439)
T ss_pred ccHHHhhhHHHH------------------------------------------------------------HHhCCCCC
Confidence 688889999999 6786 999
Q ss_pred CCccchHHHHHHHHh-CCCeEEEeCCCCCceecccCCCHHHHHhhhhhhccccccccccccCccccCCCCCCHHHHHHHH
Q 009677 237 QSVSEDLFTGFILHC-KGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYG 315 (529)
Q Consensus 237 ~svtED~~t~~~l~~-~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv~~~~~~p~~~~~~~l~~~qrl~y~ 315 (529)
++++||++++++++. .|+|..|+++ +.++.++|+|++++++||.||++|.+|++. ++.+... .++.++.++..+.
T Consensus 236 ~~i~ED~~l~~rl~~~~g~kv~~~~~--a~~~~~~p~t~~~~~~QR~RW~rG~~qv~~-~~~~~~~-~~~~~~~~~~~~~ 311 (439)
T TIGR03111 236 ETVGEDTDMTFQIRELLDGKVYLCEN--AIFYVDPIDGLNKLYTQRQRWQRGELEVSH-MFFESAN-KSIKGFFSNFMVR 311 (439)
T ss_pred CCcCccHHHHHHHHHhcCCeEEECCC--CEEEEECCcCHHHHHHHHHHHhccHHHHHH-HHHhhhh-hchhhhhhHHHHH
Confidence 999999999999975 6999999987 788999999999999999999999999986 4433222 2446666766654
Q ss_pred HHhHhhHHhHHHHHHHHHHHHHHHHhCCccc
Q 009677 316 ELSFFPLLYCLPLWCLATLPQLCLLNGISLY 346 (529)
Q Consensus 316 ~~~~~~~l~~i~~l~y~~~P~~~ll~g~~~~ 346 (529)
...... ...+|..++.++++++.+++.++.
T Consensus 312 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 312 RIMYDH-TFAFPRMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred HHHhhH-hhHHHHHHHHHHHHHHHHhccHHH
Confidence 333333 556787888888888877776543
No 20
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.92 E-value=1.6e-23 Score=236.21 Aligned_cols=207 Identities=19% Similarity=0.160 Sum_probs=146.4
Q ss_pred cccccceEEEEecC-CCchh--hHHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCC-----CCCCEEEEeC
Q 009677 18 SQNHSTIIEIIQET-FGESE--TIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVI-----SNSPYILGLD 89 (529)
Q Consensus 18 ~~~h~~~i~v~~~~-~~~~~--~~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~-----s~g~~i~ilD 89 (529)
.+|||+ .+|++.. ++|++ .+.++...++|++..+.-++ |+ .++||+|||+++...-.. ...+.++++|
T Consensus 88 ~ldYP~-~eI~vi~~~nD~~T~~~~~~l~~~~p~~~~v~~~~-~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~D 163 (727)
T PRK11234 88 TLDYEN-YHIFVGTYPNDPATQADVDAVCARFPNVHKVVCAR-PG--PTSKADCLNNVLDAITQFERSANFAFAGFILHD 163 (727)
T ss_pred hCCCCC-eEEEEEecCCChhHHHHHHHHHHHCCCcEEEEeCC-CC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEc
Confidence 789999 5776643 33333 35666677789876554333 33 368999999999983110 2346788899
Q ss_pred CCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHH----HHHHHHHHHHHHhhccCCcc-cccccceE
Q 009677 90 CDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDG----RFRSAYCVQWQGMDGLKGPV-LSGTGYYI 164 (529)
Q Consensus 90 aD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~----~~~~f~~~~~~g~d~~~~~~-~~Gtg~v~ 164 (529)
||.+++ |++|+ .+.++.+ ++ ++||+|....+.+.+...+. +....+...+++++.+++++ +.|+|+.+
T Consensus 164 AD~~v~-pd~L~-~~~~l~~----~~-~~VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af 236 (727)
T PRK11234 164 AEDVIS-PMELR-LFNYLVE----RK-DLIQIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCF 236 (727)
T ss_pred CCCCCC-hhHHH-HHHhhcC----CC-CeEeecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEE
Confidence 999998 99997 6677764 44 89999966333222222222 22233345567888887775 47999999
Q ss_pred eccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhcccccccccccccccccc----ccCCCCcc
Q 009677 165 KRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEV----GILYQSVS 240 (529)
Q Consensus 165 RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~i----G~~~~svt 240 (529)
+|+++. .+ .++ +|..+++|
T Consensus 237 ~Rr~l~--------------------------------------al-------------------~~~ggg~~~~~~~lT 259 (727)
T PRK11234 237 SRRAVT--------------------------------------AL-------------------LEDGDGIAFDVQSLT 259 (727)
T ss_pred ecccHH--------------------------------------HH-------------------HHhcCCCCcCCCcch
Confidence 444330 00 233 49999999
Q ss_pred chHHHHHHHHhCCCeEEEeCCC---------------------CCceecccCCCHHHHHhhhhhhccc-ccccc
Q 009677 241 EDLFTGFILHCKGWTSTYLTPF---------------------RPQFLGTSTTNLNDLLIQGTRWGSG-LTDVG 292 (529)
Q Consensus 241 ED~~t~~~l~~~Gwrs~y~~~~---------------------~~~~~g~aP~~l~~~~~Qr~RWa~G-~~qv~ 292 (529)
||+++|++|+.+||++.|++.. ..+++++.|+|++++++||.||.+| .+|.+
T Consensus 260 ED~dlg~rL~~~G~~v~f~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~ 333 (727)
T PRK11234 260 EDYDIGFRLKEKGMREIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGF 333 (727)
T ss_pred HHHHHHHHHHHCCCEEEEcccccccccccccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHH
Confidence 9999999999999999999821 1347888999999999999999999 57775
No 21
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.92 E-value=2.9e-24 Score=210.24 Aligned_cols=196 Identities=20% Similarity=0.285 Sum_probs=146.1
Q ss_pred Cccccccc-eEEE-EecCCCchhh--HHHhhh----ccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEE
Q 009677 16 GNSQNHST-IIEI-IQETFGESET--IRQADL----VEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILG 87 (529)
Q Consensus 16 ~~~~~h~~-~i~v-~~~~~~~~~~--~~~~~~----~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~i 87 (529)
...|++|. .++| ++|+++| ++ ++.+.. ...+.+.++.+.++ .++|++|+|.|++. ++||||++
T Consensus 23 l~~q~~~~~~~eIiVvD~s~D-~t~~~~~~~~~~~~~~~~~i~~~~~~~~----~G~k~~a~n~g~~~----a~~~~i~~ 93 (232)
T cd06437 23 ACALDYPKDRLEIQVLDDSTD-ETVRLAREIVEEYAAQGVNIKHVRRADR----TGYKAGALAEGMKV----AKGEYVAI 93 (232)
T ss_pred HHhcCCCccceEEEEEECCCC-cHHHHHHHHHHHHhhcCCceEEEECCCC----CCCchHHHHHHHHh----CCCCEEEE
Confidence 34688885 3444 4455443 32 222211 23467888887665 36799999999999 89999999
Q ss_pred eCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHH----HHHHHHHHHHHHhhccCCcc-cccccc
Q 009677 88 LDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDG----RFRSAYCVQWQGMDGLKGPV-LSGTGY 162 (529)
Q Consensus 88 lDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~----~~~~f~~~~~~g~d~~~~~~-~~Gtg~ 162 (529)
+|||.+++ |++|+++..++. ++++++||.+..+.|.+. ..+.. ....++.....+....+..+ ++|+++
T Consensus 94 ~DaD~~~~-~~~l~~~~~~~~----~~~v~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 167 (232)
T cd06437 94 FDADFVPP-PDFLQKTPPYFA----DPKLGFVQTRWGHINANY-SLLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAG 167 (232)
T ss_pred EcCCCCCC-hHHHHHhhhhhc----CCCeEEEecceeeEcCCC-chhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchh
Confidence 99999997 999999776665 478999999877665432 22211 11223444444444444433 589999
Q ss_pred eEeccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCCCccc
Q 009677 163 YIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSVSE 241 (529)
Q Consensus 163 v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~svtE 241 (529)
++||+++ +++| |...+..|
T Consensus 168 ~~rr~~~------------------------------------------------------------~~vgg~~~~~~~E 187 (232)
T cd06437 168 VWRKECI------------------------------------------------------------EDAGGWNHDTLTE 187 (232)
T ss_pred hhhHHHH------------------------------------------------------------HHhCCCCCCcchh
Confidence 9999998 6887 98888999
Q ss_pred hHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhcccc
Q 009677 242 DLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGL 288 (529)
Q Consensus 242 D~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~ 288 (529)
|+++++|++.+||++.|+++ +.++...|+|+.++++||+||++|.
T Consensus 188 D~~l~~rl~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~rW~~g~ 232 (232)
T cd06437 188 DLDLSYRAQLKGWKFVYLDD--VVVPAELPASMSAYRSQQHRWSKGP 232 (232)
T ss_pred hHHHHHHHHHCCCeEEEecc--ceeeeeCCcCHHHHHHHHHHhccCC
Confidence 99999999999999999987 7889999999999999999999994
No 22
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.92 E-value=8.3e-24 Score=205.56 Aligned_cols=201 Identities=29% Similarity=0.423 Sum_probs=158.2
Q ss_pred ccccccce-EE-EEecCCCchhh--HHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCC
Q 009677 17 NSQNHSTI-IE-IIQETFGESET--IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDM 92 (529)
Q Consensus 17 ~~~~h~~~-i~-v~~~~~~~~~~--~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~ 92 (529)
..|++|.. .+ |++||++++++ +........ ++.++.++++ .++|+||+|.|++. +++|||+++|+|.
T Consensus 25 ~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~n~~~~~----a~~d~i~~lD~D~ 95 (234)
T cd06421 25 LAIDYPHDKLRVYVLDDGRRPELRALAAELGVEY-GYRYLTRPDN----RHAKAGNLNNALAH----TTGDFVAILDADH 95 (234)
T ss_pred HhcCCCcccEEEEEEcCCCchhHHHHHHHhhccc-CceEEEeCCC----CCCcHHHHHHHHHh----CCCCEEEEEcccc
Confidence 35778872 33 34455544432 333333333 5677777655 47899999999999 8999999999999
Q ss_pred CCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchH----HHHHHHHHHHHHHHhhccCCcccccccceEeccc
Q 009677 93 YCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIY----DGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRES 168 (529)
Q Consensus 93 ~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~----~~~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~a 168 (529)
+++ |++|.+.+..+.+ +++++.|++++.+.+.+..++. ......++.....+...++...++|++.++||++
T Consensus 96 ~~~-~~~l~~l~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~ 171 (234)
T cd06421 96 VPT-PDFLRRTLGYFLD---DPKVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREA 171 (234)
T ss_pred CcC-ccHHHHHHHHHhc---CCCeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHH
Confidence 997 9999999999874 5889999999988876543222 2333455556666666666778899999999999
Q ss_pred cccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCCCccchHHHHH
Q 009677 169 LYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSVSEDLFTGF 247 (529)
Q Consensus 169 L~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~svtED~~t~~ 247 (529)
+ +++| |+...+.||++++.
T Consensus 172 ~------------------------------------------------------------~~ig~~~~~~~~eD~~l~~ 191 (234)
T cd06421 172 L------------------------------------------------------------DEIGGFPTDSVTEDLATSL 191 (234)
T ss_pred H------------------------------------------------------------HHhCCCCccceeccHHHHH
Confidence 9 6787 88888999999999
Q ss_pred HHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhcccccccc
Q 009677 248 ILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVG 292 (529)
Q Consensus 248 ~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv~ 292 (529)
+++++||++.|+++ +...+..|+++.++++||.||.+|++|++
T Consensus 192 r~~~~g~~i~~~~~--~~~~~~~~~~~~~~~~q~~rw~~~~~~~~ 234 (234)
T cd06421 192 RLHAKGWRSVYVPE--PLAAGLAPETLAAYIKQRLRWARGMLQIL 234 (234)
T ss_pred HHHHcCceEEEecC--ccccccCCccHHHHHHHHHHHhcCCeeeC
Confidence 99999999999997 77899999999999999999999999964
No 23
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.90 E-value=7.3e-23 Score=200.18 Aligned_cols=206 Identities=18% Similarity=0.246 Sum_probs=150.5
Q ss_pred CccccccceEEEEecCCCchhh---HHHhhhccC-CcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCC
Q 009677 16 GNSQNHSTIIEIIQETFGESET---IRQADLVEM-PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCD 91 (529)
Q Consensus 16 ~~~~~h~~~i~v~~~~~~~~~~---~~~~~~~~~-p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD 91 (529)
..++++|..--|++|++.++++ .+.+...+. +++.++..+++ .++|+||+|.|++.+. .++|||+++|+|
T Consensus 21 l~~q~~~~~eiiVvdd~s~D~t~~~~i~~~~~~~~~~i~~i~~~~~----~G~~~~a~n~g~~~a~--~~~d~i~~lD~D 94 (236)
T cd06435 21 LAALDYPNFEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEPL----PGAKAGALNYALERTA--PDAEIIAVIDAD 94 (236)
T ss_pred HHhCCCCCcEEEEEeCCCCchhHHHHHHHHHHHhCCcEEEEEcCCC----CCCchHHHHHHHHhcC--CCCCEEEEEcCC
Confidence 3467777643355565554433 222333333 46778877655 3679999999999842 358999999999
Q ss_pred CCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHH----HHHHHHHHHhhccCCcccccccceEecc
Q 009677 92 MYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFR----SAYCVQWQGMDGLKGPVLSGTGYYIKRE 167 (529)
Q Consensus 92 ~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~----~f~~~~~~g~d~~~~~~~~Gtg~v~RR~ 167 (529)
..++ |++|.+.+..+. +++++.||++..+.+.. ..++..... .++..........+..++.|+++++||+
T Consensus 95 ~~~~-~~~l~~l~~~~~----~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~ 168 (236)
T cd06435 95 YQVE-PDWLKRLVPIFD----DPRVGFVQAPQDYRDGE-ESLFKRMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRS 168 (236)
T ss_pred CCcC-HHHHHHHHHHhc----CCCeeEEecCccccCCC-ccHHHHHHhHHHHHHHHHHhccccccCceEEecceEEEEHH
Confidence 9998 999999998875 37899999987665432 233432111 1122212222333444567999999999
Q ss_pred ccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCCCccchHHHH
Q 009677 168 SLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSVSEDLFTG 246 (529)
Q Consensus 168 aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~svtED~~t~ 246 (529)
++ +++| |+.....||.+++
T Consensus 169 ~~------------------------------------------------------------~~iGgf~~~~~~eD~dl~ 188 (236)
T cd06435 169 AL------------------------------------------------------------DDVGGWDEWCITEDSELG 188 (236)
T ss_pred HH------------------------------------------------------------HHhCCCCCccccchHHHH
Confidence 99 6887 9888889999999
Q ss_pred HHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhcccccccccccc
Q 009677 247 FILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRF 296 (529)
Q Consensus 247 ~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv~~~~~ 296 (529)
+|++.+||+..|+++ +..+...|+|+.++++||.||++|++|++. ||
T Consensus 189 ~r~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~q~~rw~~g~~~~~~-~~ 235 (236)
T cd06435 189 LRMHEAGYIGVYVAQ--SYGHGLIPDTFEAFKKQRFRWAYGAVQILK-KH 235 (236)
T ss_pred HHHHHCCcEEEEcch--hhccCcCcccHHHHHHHHHHHhcchhhhhh-cc
Confidence 999999999999986 667889999999999999999999999985 54
No 24
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.90 E-value=5.4e-23 Score=203.02 Aligned_cols=202 Identities=21% Similarity=0.262 Sum_probs=149.1
Q ss_pred Cccccccce-EEEEe-cCCCchhh--HHHhhhc-cCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCC
Q 009677 16 GNSQNHSTI-IEIIQ-ETFGESET--IRQADLV-EMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDC 90 (529)
Q Consensus 16 ~~~~~h~~~-i~v~~-~~~~~~~~--~~~~~~~-~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDa 90 (529)
+.+++||+. ++|++ ++++++++ ++..... ...+++++.+.+ ..+|++|+|.|++. ++||||+.+|+
T Consensus 23 l~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~-----~~G~~~a~n~g~~~----a~gd~i~~~Da 93 (241)
T cd06427 23 LSALDYPRSKLDVKLLLEEDDEETIAAARALRLPSIFRVVVVPPSQ-----PRTKPKACNYALAF----ARGEYVVIYDA 93 (241)
T ss_pred HHhCcCCcccEEEEEEECCCCchHHHHHHHhccCCCeeEEEecCCC-----CCchHHHHHHHHHh----cCCCEEEEEcC
Confidence 456788752 44433 44434333 3332221 123455544322 26899999999999 89999999999
Q ss_pred CCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHH----HHHHHHHHHHHHHhhccCCcc-cccccceEe
Q 009677 91 DMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYD----GRFRSAYCVQWQGMDGLKGPV-LSGTGYYIK 165 (529)
Q Consensus 91 D~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~----~~~~~f~~~~~~g~d~~~~~~-~~Gtg~v~R 165 (529)
|..++ |+++.+++.+|.+ .++++++||++..++|... .... ......++...++....+.+. ++|+++++|
T Consensus 94 D~~~~-~~~l~~~~~~~~~--~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r 169 (241)
T cd06427 94 EDAPD-PDQLKKAVAAFAR--LDDKLACVQAPLNYYNARE-NWLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFR 169 (241)
T ss_pred CCCCC-hHHHHHHHHHHHh--cCCCEEEEeCceEeeCCCc-cHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhh
Confidence 99998 9999999999874 2478999999988876532 1111 112233445556666555554 468899999
Q ss_pred ccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCCCccchHH
Q 009677 166 RESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSVSEDLF 244 (529)
Q Consensus 166 R~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~svtED~~ 244 (529)
|+++ +++| |.....+||++
T Consensus 170 r~~~------------------------------------------------------------~~vgg~~~~~~~eD~~ 189 (241)
T cd06427 170 TDVL------------------------------------------------------------RELGGWDPFNVTEDAD 189 (241)
T ss_pred HHHH------------------------------------------------------------HHcCCCCcccchhhHH
Confidence 9999 6787 88888899999
Q ss_pred HHHHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhccccccccc
Q 009677 245 TGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGL 293 (529)
Q Consensus 245 t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv~~ 293 (529)
.++|++.+||+..|++. ..+...|+|++++++||.||+.|.+|++.
T Consensus 190 l~~rl~~~G~r~~~~~~---~~~~~~~~~~~~~~~q~~Rw~~g~~~~~~ 235 (241)
T cd06427 190 LGLRLARAGYRTGVLNS---TTLEEANNALGNWIRQRSRWIKGYMQTWL 235 (241)
T ss_pred HHHHHHHCCceEEEecc---cccccCcHhHHHHHHHHHHHhccHHHHHH
Confidence 99999999999999974 35788999999999999999999999986
No 25
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.87 E-value=1.4e-23 Score=204.07 Aligned_cols=196 Identities=24% Similarity=0.277 Sum_probs=124.5
Q ss_pred ccccccceEEEEecCCCchhh--HHHhhhccCCc--EEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCC
Q 009677 17 NSQNHSTIIEIIQETFGESET--IRQADLVEMPL--LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDM 92 (529)
Q Consensus 17 ~~~~h~~~i~v~~~~~~~~~~--~~~~~~~~~p~--l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~ 92 (529)
.+++|+.+--+++++++++++ .+++...++|. +.++.++++++ .++|++|+|.+++. .++|+|+++|+|.
T Consensus 24 ~~~~~~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~ 97 (228)
T PF13641_consen 24 LAQDYPRLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDT 97 (228)
T ss_dssp TTSHHHTEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE----HH--HHHHHHHHHHHHHH-------SEEEEE-SSE
T ss_pred HcCCCCCeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCc
Confidence 456776644445565554432 34445556775 58888876542 14799999999999 8899999999999
Q ss_pred CCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHH----HHHHHhhccCCcccccccceEeccc
Q 009677 93 YCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYC----VQWQGMDGLKGPVLSGTGYYIKRES 168 (529)
Q Consensus 93 ~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~----~~~~g~d~~~~~~~~Gtg~v~RR~a 168 (529)
+++ |++|++++.+|. ++++++||++..+++. +..+......++. ....+....+..+++|+++++||++
T Consensus 98 ~~~-p~~l~~~~~~~~----~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~ 170 (228)
T PF13641_consen 98 VLD-PDWLERLLAAFA----DPGVGAVGGPVFPDND--RNWLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSA 170 (228)
T ss_dssp EE--CHHHHHHHHHHH----BSS--EEEEEEEETTC--CCEEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHH
T ss_pred EEC-HHHHHHHHHHHH----hCCCCeEeeeEeecCC--CCHHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHH
Confidence 997 999999999995 4899999988866642 2222211111111 1122334445566789999999999
Q ss_pred cccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCCCccchHHHHH
Q 009677 169 LYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSVSEDLFTGF 247 (529)
Q Consensus 169 L~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~svtED~~t~~ 247 (529)
+ +++| |+.....||.+++.
T Consensus 171 ~------------------------------------------------------------~~~g~fd~~~~~eD~~l~~ 190 (228)
T PF13641_consen 171 L------------------------------------------------------------EEVGGFDPFILGEDFDLCL 190 (228)
T ss_dssp H------------------------------------------------------------HHH-S--SSSSSHHHHHHH
T ss_pred H------------------------------------------------------------HHhCCCCCCCcccHHHHHH
Confidence 9 6886 98888899999999
Q ss_pred HHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhccc
Q 009677 248 ILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 287 (529)
Q Consensus 248 ~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 287 (529)
++.++||++.|++. +..+...|.|++++++||.||++|
T Consensus 191 r~~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 191 RLRAAGWRIVYAPD--ALVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp HHHHTT--EEEEEE--EEEEE--SSSTHHHHHHHHHHH--
T ss_pred HHHHCCCcEEEECC--cEEEEeCCCCHHHHHHHHhccCcC
Confidence 99999999999986 779999999999999999999988
No 26
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.86 E-value=8.3e-20 Score=204.23 Aligned_cols=209 Identities=18% Similarity=0.151 Sum_probs=151.9
Q ss_pred ccccccceEEEEe---cCCCchhhHHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhc---CCCCCCCE--EEEe
Q 009677 17 NSQNHSTIIEIIQ---ETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVS---GVISNSPY--ILGL 88 (529)
Q Consensus 17 ~~~~h~~~i~v~~---~~~~~~~~~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s---~~~s~g~~--i~il 88 (529)
.+.|||.. +|++ .|+++.....++...++|+++.|..+++ ...+||.|||+++... ...+.++| |+++
T Consensus 95 ~~ldYp~~-~I~v~~~~nD~~T~~~~~~~~~~~p~~~~v~~~~~---gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~ 170 (703)
T PRK15489 95 ATLDYRRY-VIFVGTYPNDAETITEVERMRRRYKRLVRVEVPHD---GPTCKADCLNWIIQAIFRYEAGHGIEFAGVILH 170 (703)
T ss_pred hcCCCCCe-EEEEEecCCCccHHHHHHHHhccCCcEEEEEcCCC---CCCCHHHHHHHHHHHHHhhhhhccCccceEEEE
Confidence 46799976 5766 5555554456666777898887775432 2479999999999872 11123444 9999
Q ss_pred CCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcch----HHHHHHHHHHHHHHHhhccCCccc-ccccce
Q 009677 89 DCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDI----YDGRFRSAYCVQWQGMDGLKGPVL-SGTGYY 163 (529)
Q Consensus 89 DaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~----~~~~~~~f~~~~~~g~d~~~~~~~-~Gtg~v 163 (529)
|||.+|+ |++|+. +.++.+ ++ .+||.|..-...+.++. |..+....++..+.++..+++++. .|||+.
T Consensus 171 DAEd~~~-P~~L~~-~~~~~~---~~--~~iQ~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~ 243 (703)
T PRK15489 171 DSEDVLH-PLELKY-FNYLLP---RK--DLVQLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTC 243 (703)
T ss_pred cCCCCCC-hhHHHH-HHhhcC---Cc--ceeeeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCccee
Confidence 9999998 999975 467764 23 36998843222222222 334566677788889999988875 799999
Q ss_pred EeccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhcccccccccccccccccc---ccCCCCcc
Q 009677 164 IKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEV---GILYQSVS 240 (529)
Q Consensus 164 ~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~i---G~~~~svt 240 (529)
|||+||. +++ ++- +|..+|+|
T Consensus 244 frr~aL~--------------------------------------~l~------------------~~gg~~~~n~~sLT 267 (703)
T PRK15489 244 FSRRALL--------------------------------------ALM------------------KERGNQPFNTSSLT 267 (703)
T ss_pred eeHHHHH--------------------------------------HHH------------------HhcCCCCCCCCCch
Confidence 9999982 111 121 47889999
Q ss_pred chHHHHHHHHhCCCeEEEeC---------------------CCCCceecccCCCHHHHHhhhhhhccccc-ccc
Q 009677 241 EDLFTGFILHCKGWTSTYLT---------------------PFRPQFLGTSTTNLNDLLIQGTRWGSGLT-DVG 292 (529)
Q Consensus 241 ED~~t~~~l~~~Gwrs~y~~---------------------~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~-qv~ 292 (529)
||++.|+||+.+|||+.|+. +...+.++..|.|+++.++||.||-.|-. |-.
T Consensus 268 ED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 268 EDYDFSFRLAELGMQEIFVRFPVQFRVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred HhHHHHHHHHHCCCceEEEEEeccccccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 99999999999999999921 11367889999999999999999999987 764
No 27
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.82 E-value=1.2e-19 Score=191.66 Aligned_cols=198 Identities=14% Similarity=0.143 Sum_probs=143.0
Q ss_pred CCccccccceEEEEe-cCCCchh--hHHHhhhccCCc--EEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeC
Q 009677 15 YGNSQNHSTIIEIIQ-ETFGESE--TIRQADLVEMPL--LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLD 89 (529)
Q Consensus 15 ~~~~~~h~~~i~v~~-~~~~~~~--~~~~~~~~~~p~--l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilD 89 (529)
+...||||+ .+|++ ++++++. ++.++...++|+ +.++...++++ .++|++|+|++++. +++|+|+++|
T Consensus 62 Sl~~q~Yp~-~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~D 134 (373)
T TIGR03472 62 SFCRQDYPG-FQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARRHG--PNRKVSNLINMLPH----ARHDILVIAD 134 (373)
T ss_pred HHHhcCCCC-eEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCCCC--CChHHHHHHHHHHh----ccCCEEEEEC
Confidence 567899998 56655 4444443 345555667775 77776554433 35799999999998 8999999999
Q ss_pred CCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHH-----HHHHHHHHhhccCC-cccccccce
Q 009677 90 CDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRS-----AYCVQWQGMDGLKG-PVLSGTGYY 163 (529)
Q Consensus 90 aD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~-----f~~~~~~g~d~~~~-~~~~Gtg~v 163 (529)
||.+++ |++|++.+..|.| ++++.|+++.... +.++....-... |+...... +..+. .++.|++.+
T Consensus 135 aD~~~~-p~~L~~lv~~~~~----~~v~~V~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~a 206 (373)
T TIGR03472 135 SDISVG-PDYLRQVVAPLAD----PDVGLVTCLYRGR--PVPGFWSRLGAMGINHNFLPSVMVA-RALGRARFCFGATMA 206 (373)
T ss_pred CCCCcC-hhHHHHHHHHhcC----CCcceEeccccCC--CCCCHHHHHHHHHhhhhhhHHHHHH-HhccCCccccChhhh
Confidence 999998 9999999999864 7899999864322 222332221111 11111111 22222 346799999
Q ss_pred EeccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCC--CCcc
Q 009677 164 IKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILY--QSVS 240 (529)
Q Consensus 164 ~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~--~svt 240 (529)
+||+++ +++| |+. ++++
T Consensus 207 ~RR~~l------------------------------------------------------------~~iGGf~~~~~~~~ 226 (373)
T TIGR03472 207 LRRATL------------------------------------------------------------EAIGGLAALAHHLA 226 (373)
T ss_pred eeHHHH------------------------------------------------------------HHcCChHHhcccch
Confidence 999999 6787 864 5789
Q ss_pred chHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhccccc
Q 009677 241 EDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLT 289 (529)
Q Consensus 241 ED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~ 289 (529)
||++++.++..+||++.|++. +......|+|++++++||.||++..-
T Consensus 227 ED~~l~~~i~~~G~~v~~~~~--~v~~~~~~~s~~~~~~q~~RW~r~~~ 273 (373)
T TIGR03472 227 DDYWLGELVRALGLRVVLAPV--VVDTDVHETSFATLLAHELRWSRTIR 273 (373)
T ss_pred HHHHHHHHHHHcCCeEEecch--hhhcCCCccCHHHHHHHHHHHHhhhh
Confidence 999999999999999999875 66777889999999999999986544
No 28
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.82 E-value=4.2e-20 Score=183.64 Aligned_cols=172 Identities=17% Similarity=0.037 Sum_probs=116.5
Q ss_pred HHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHH---HH
Q 009677 68 ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAY---CV 144 (529)
Q Consensus 68 aLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~---~~ 144 (529)
++|.++.. +++|||+++|||.+++ |++|++.+.+|.. +|+++.|++.+...|.. ..++..-+..-| ..
T Consensus 64 ~~~~~~~~----a~~e~i~~~DaD~~~~-~~~l~~l~~~~~~---~p~vg~v~g~~~~~~~~-~~~~~~~q~~ey~~~~~ 134 (244)
T cd04190 64 YFCRVLFP----DDPEFILLVDADTKFD-PDSIVQLYKAMDK---DPEIGGVCGEIHPMGKK-QGPLVMYQVFEYAISHW 134 (244)
T ss_pred HHHHHhhc----CCCCEEEEECCCCcCC-HhHHHHHHHHHHh---CCCEEEEEeeeEEcCCc-chhHHHhHheehhhhhh
Confidence 45666665 8999999999999998 9999999999853 58999999988776642 223322111111 11
Q ss_pred HH-HHhhccCCc-ccccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhcccccccc
Q 009677 145 QW-QGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSY 222 (529)
Q Consensus 145 ~~-~g~d~~~~~-~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~y 222 (529)
.. .+.+..+.. ++.|+++++|++++...+ |... ....+.|
T Consensus 135 ~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~---------~~~~-----------------------------~~~~~~~ 176 (244)
T cd04190 135 LDKAFESVFGFVTCLPGCFSMYRIEALKGDN---------GGKG-----------------------------PLLDYAY 176 (244)
T ss_pred hcccHHHcCCceEECCCceEEEEehhhcCCc---------cccc-----------------------------cchhhcc
Confidence 11 223334443 347999999999994200 0000 0000011
Q ss_pred cccccccccc-ccCCCCccchHHHHHHHHhCCCeEEE--eCCCCCceecccCCCHHHHHhhhhhhcccccc
Q 009677 223 EHQTKWGEEV-GILYQSVSEDLFTGFILHCKGWTSTY--LTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTD 290 (529)
Q Consensus 223 e~~t~wg~~i-G~~~~svtED~~t~~~l~~~Gwrs~y--~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~q 290 (529)
.+.+. ++. +....+++||.+++++|..+||++.| +++ +.++.++|+|++++++||.||++|++.
T Consensus 177 ~~~~~--~~~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~--a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 177 LTNTV--DSLHKKNNLDLGEDRILCTLLLKAGPKRKYLYVPG--AVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred ccCcc--cchHHHHHHhHhcccceeHHHhccCCccEEEEecc--cEEEEECCCCHHHHHHHhHhhhccccc
Confidence 11111 121 13445789999999999999999999 876 788999999999999999999999874
No 29
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.81 E-value=5.3e-19 Score=170.71 Aligned_cols=198 Identities=18% Similarity=0.165 Sum_probs=139.0
Q ss_pred Cccccccc--eEEEEecCCCchhh--HHH-hhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCC
Q 009677 16 GNSQNHST--IIEIIQETFGESET--IRQ-ADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDC 90 (529)
Q Consensus 16 ~~~~~h~~--~i~v~~~~~~~~~~--~~~-~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDa 90 (529)
...|+||+ .--|++++++++++ .+. ......+++.++.++. + ...+|+.++|.+++. +++|||+++|+
T Consensus 19 l~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~v~~~~~~~-~--~~~g~~~a~n~g~~~----~~~d~i~~~D~ 91 (229)
T cd04192 19 LSALDYPKEKFEVILVDDHSTDGTVQILEFAAAKPNFQLKILNNSR-V--SISGKKNALTTAIKA----AKGDWIVTTDA 91 (229)
T ss_pred HHhCCCCCCceEEEEEcCCCCcChHHHHHHHHhCCCcceEEeeccC-c--ccchhHHHHHHHHHH----hcCCEEEEECC
Confidence 45678886 33234454443322 232 2233456787777653 2 137899999999999 89999999999
Q ss_pred CCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHH--HHH-HHHHHHHHHhhccCCc-ccccccceEec
Q 009677 91 DMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDG--RFR-SAYCVQWQGMDGLKGP-VLSGTGYYIKR 166 (529)
Q Consensus 91 D~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~--~~~-~f~~~~~~g~d~~~~~-~~~Gtg~v~RR 166 (529)
|.++. |++|++.+..+.+ ++.+.|+.+..+... +..... ... .+......+....+.+ .++|++.++||
T Consensus 92 D~~~~-~~~l~~l~~~~~~----~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr 164 (229)
T cd04192 92 DCVVP-SNWLLTFVAFIQK----EQIGLVAGPVIYFKG--KSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRK 164 (229)
T ss_pred CcccC-HHHHHHHHHHhhc----CCCcEEeeeeeecCC--ccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceEEEEH
Confidence 99998 9999999998764 556778888776522 221111 111 1111122223334444 35788999999
Q ss_pred cccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCC--CCccchH
Q 009677 167 ESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILY--QSVSEDL 243 (529)
Q Consensus 167 ~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~--~svtED~ 243 (529)
+++ +++| |++ ...+||.
T Consensus 165 ~~~------------------------------------------------------------~~~ggf~~~~~~~~eD~ 184 (229)
T cd04192 165 EAF------------------------------------------------------------FEVGGFEGNDHIASGDD 184 (229)
T ss_pred HHH------------------------------------------------------------HHhcCCccccccccCCH
Confidence 998 6787 864 4678999
Q ss_pred HHHHHHHhCCC-eEEEeCCCCCceecccCCCHHHHHhhhhhhccc
Q 009677 244 FTGFILHCKGW-TSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 287 (529)
Q Consensus 244 ~t~~~l~~~Gw-rs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 287 (529)
+..+++..+|| ++.|++......+...|.+++++++||+||++|
T Consensus 185 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 185 ELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred HHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 99999999999 998886434677889999999999999999998
No 30
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.81 E-value=1.1e-19 Score=174.00 Aligned_cols=165 Identities=16% Similarity=0.179 Sum_probs=129.6
Q ss_pred CccccccceEEEE-ecCCCchhh--HHHhhhccCCc--EEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCC
Q 009677 16 GNSQNHSTIIEII-QETFGESET--IRQADLVEMPL--LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDC 90 (529)
Q Consensus 16 ~~~~~h~~~i~v~-~~~~~~~~~--~~~~~~~~~p~--l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDa 90 (529)
...|+||+ .+|+ +++++++++ +..+....+|+ +.++..+++.+ ..+|++|+|.+++. +++||++++|+
T Consensus 23 l~~q~~~~-~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~n~g~~~----a~~d~i~~~D~ 95 (196)
T cd02520 23 FFQQDYPK-YEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKVG--INPKVNNLIKGYEE----ARYDILVISDS 95 (196)
T ss_pred HHhccCCC-eEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcCC--CCHhHHHHHHHHHh----CCCCEEEEECC
Confidence 35678888 4544 455555433 34455566774 44665544322 24799999999999 89999999999
Q ss_pred CCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHHHHHHHhhccCCcccccccceEeccccc
Q 009677 91 DMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLY 170 (529)
Q Consensus 91 D~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL~ 170 (529)
|..++ |++|++.+..+.+ +++++|++. +..|+++++||+++
T Consensus 96 D~~~~-~~~l~~l~~~~~~----~~~~~v~~~---------------------------------~~~g~~~~~r~~~~- 136 (196)
T cd02520 96 DISVP-PDYLRRMVAPLMD----PGVGLVTCL---------------------------------CAFGKSMALRREVL- 136 (196)
T ss_pred CceEC-hhHHHHHHHHhhC----CCCCeEEee---------------------------------cccCceeeeEHHHH-
Confidence 99997 9999999998764 678888753 45789999999998
Q ss_pred cCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCC--CCccchHHHHH
Q 009677 171 ADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILY--QSVSEDLFTGF 247 (529)
Q Consensus 171 g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~--~svtED~~t~~ 247 (529)
+++| |+. ..+.||++.++
T Consensus 137 -----------------------------------------------------------~~~ggf~~~~~~~~eD~~l~~ 157 (196)
T cd02520 137 -----------------------------------------------------------DAIGGFEAFADYLAEDYFLGK 157 (196)
T ss_pred -----------------------------------------------------------HhccChHHHhHHHHHHHHHHH
Confidence 5776 754 35689999999
Q ss_pred HHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhccc
Q 009677 248 ILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 287 (529)
Q Consensus 248 ~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 287 (529)
++..+||++.|+++ +..+...|.+++++++||.||++.
T Consensus 158 rl~~~G~~i~~~~~--~~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 158 LIWRLGYRVVLSPY--VVMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred HHHHcCCeEEEcch--heeccCCcccHHHHHHHHHHHhcc
Confidence 99999999999987 678889999999999999999863
No 31
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.81 E-value=2.1e-19 Score=170.98 Aligned_cols=136 Identities=27% Similarity=0.392 Sum_probs=112.0
Q ss_pred EEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHHHH----HHHhhccCCc-ccc
Q 009677 84 YILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQ----WQGMDGLKGP-VLS 158 (529)
Q Consensus 84 ~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~----~~g~d~~~~~-~~~ 158 (529)
||+++|||+.++ ||++++++.++.+ |++++||+|..++|. ++...+.+...+... ....+..+.+ .+.
T Consensus 1 ~v~~~DaDt~~~-~d~l~~~~~~~~~----~~~~~vq~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTRLP-PDFLERLVAALED----PKVDAVQGPIIFRNR--GSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCCCC-hHHHHHHHHHHhC----CCceEEEccEEecCC--CChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 689999999998 9999999998874 789999999998643 455555444444221 1222344443 458
Q ss_pred cccceEeccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cC-C
Q 009677 159 GTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-IL-Y 236 (529)
Q Consensus 159 Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~-~ 236 (529)
|+|.++||+++ +++| |+ .
T Consensus 74 G~~~~~r~~~l------------------------------------------------------------~~vg~~~~~ 93 (193)
T PF13632_consen 74 GSGMLFRREAL------------------------------------------------------------REVGGFDDP 93 (193)
T ss_pred CcceeeeHHHH------------------------------------------------------------HHhCccccc
Confidence 99999999999 6886 99 8
Q ss_pred CCccchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhcccc
Q 009677 237 QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGL 288 (529)
Q Consensus 237 ~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~ 288 (529)
.+++||+++++++.++|||+.|+++ +.++..+|+|+.++++||+||+.|.
T Consensus 94 ~~~~ED~~l~~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 94 FSIGEDMDLGFRLRRAGYRIVYVPD--AIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred ccccchHHHHHHHHHCCCEEEEecc--cceeeeCCCCHHHHHHHHHHHHhhh
Confidence 8999999999999999999999987 5689999999999999999999998
No 32
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.79 E-value=1.7e-18 Score=168.85 Aligned_cols=179 Identities=17% Similarity=0.101 Sum_probs=126.2
Q ss_pred ccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCc
Q 009677 44 VEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQ 123 (529)
Q Consensus 44 ~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq 123 (529)
...+.+.++. ++ +.+|++|+|.+++. +++|||+++|+|..+. |++|++++..|.+ ++++.|++.+
T Consensus 50 ~~~~~~~v~~-~~-----~~g~~~a~n~g~~~----a~~d~v~~lD~D~~~~-~~~l~~l~~~~~~----~~v~~v~~~~ 114 (235)
T cd06434 50 VKYGGIFVIT-VP-----HPGKRRALAEGIRH----VTTDIVVLLDSDTVWP-PNALPEMLKPFED----PKVGGVGTNQ 114 (235)
T ss_pred ccCCcEEEEe-cC-----CCChHHHHHHHHHH----hCCCEEEEECCCceeC-hhHHHHHHHhccC----CCEeEEcCce
Confidence 3456666654 33 36899999999999 8999999999999998 9999999999874 8899999988
Q ss_pred eeccCCCcchHHHHHHHHHHH----HHHHhhccCCc-ccccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhcc
Q 009677 124 KFHNINKYDIYDGRFRSAYCV----QWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQ 198 (529)
Q Consensus 124 ~f~n~~~~d~~~~~~~~f~~~----~~~g~d~~~~~-~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~ 198 (529)
.+.+.+ ...+......++.. ........++. .+.|.+.++||+++.. .+-..+|
T Consensus 115 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~----------~~~~~~~---------- 173 (235)
T cd06434 115 RILRPR-DSKWSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKD----------FLFLEEF---------- 173 (235)
T ss_pred EeecCc-ccHHHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhh----------hhhHHHh----------
Confidence 877653 22332221222221 11222333333 3468888999999831 0000000
Q ss_pred cCCCCCCchhhhHHhhccccccccccccccccc-cccCCCCccchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHH
Q 009677 199 NNANGENFSNVLQEETGVLASCSYEHQTKWGEE-VGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDL 277 (529)
Q Consensus 199 ~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~-iG~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~ 277 (529)
. .+ ++.......||.+++.+++.+||+..|++. +.++..+|+++.++
T Consensus 174 ------------~------------------~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~ 221 (235)
T cd06434 174 ------------T------------------NETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYT--SEAYTETPENYKKF 221 (235)
T ss_pred ------------h------------------hhhhcCCCCCcCchHHHHHHHHHCCCeEEEecC--CeEEEEcchhHHHH
Confidence 0 12 222224678999999999999999999987 66788899999999
Q ss_pred Hhhhhhhcccccc
Q 009677 278 LIQGTRWGSGLTD 290 (529)
Q Consensus 278 ~~Qr~RWa~G~~q 290 (529)
++||.||++|..+
T Consensus 222 ~~q~~Rw~~~~~~ 234 (235)
T cd06434 222 LKQQLRWSRSNWR 234 (235)
T ss_pred HHHhhhhhhcccC
Confidence 9999999999853
No 33
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.76 E-value=6.5e-16 Score=162.86 Aligned_cols=219 Identities=16% Similarity=0.102 Sum_probs=166.7
Q ss_pred hccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccC
Q 009677 43 LVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFP 122 (529)
Q Consensus 43 ~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~p 122 (529)
..+.-++.|-.|.+| .+-||||+....|+.| +.++|++++|||.+.. +|.+-+.+..|. .+|+.|++||-
T Consensus 208 ~~g~~~ifYRrRr~n----~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSvMt-gd~lvrLv~~ME---~~P~aGlIQt~ 277 (736)
T COG2943 208 LGGEGNIFYRRRRRN----VKRKAGNIADFCRRWG--SAYSYMLVLDADSVMT-GDCLVRLVRLME---ANPDAGLIQTS 277 (736)
T ss_pred hCCCCceeeehHhhh----hcccccCHHHHHHHhC--cccceEEEeecccccC-chHHHHHHHHHh---hCCCCceeecc
Confidence 445668888888777 5789999999999988 8999999999999999 899999888876 48999999996
Q ss_pred ceeccCCCcchHHHHHH----HHHHHHHHHhhccCCcc--cccccceEeccccccCCchhhhhhccCCchhhHhhhhhhh
Q 009677 123 QKFHNINKYDIYDGRFR----SAYCVQWQGMDGLKGPV--LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSY 196 (529)
Q Consensus 123 q~f~n~~~~d~~~~~~~----~f~~~~~~g~d~~~~~~--~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~ 196 (529)
-.-.|. +..|++-+. ++=-+.-.|...|++.. |-|.|+++|.++...
T Consensus 278 P~~~gg--~TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~------------------------- 330 (736)
T COG2943 278 PKASGG--DTLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIE------------------------- 330 (736)
T ss_pred hhhcCc--chHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHH-------------------------
Confidence 655554 355654322 22234556888888754 789999999999731
Q ss_pred cccCCCCCCchhhhHHhhccccccccccccccccccc-cCCCCccchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHH
Q 009677 197 KQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLN 275 (529)
Q Consensus 197 ~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~ 275 (529)
||....- -.=| |....++.|+..+-.|.+.||.+--.+ +-.-++++.|.|+.
T Consensus 331 ----------------------hcgLp~L----pG~~pFgG~ilSHDfvEAALmRRaGW~v~ia~-dL~GSyEE~PpnLl 383 (736)
T COG2943 331 ----------------------HCGLPPL----PGRGPFGGHILSHDFVEAALMRRAGWGVWIAY-DLDGSYEELPPNLL 383 (736)
T ss_pred ----------------------hcCCCCC----CCCCCCCccccchHHHHHHHHhhcCceEEEec-cCCCchhhCCchHH
Confidence 2222221 0113 666788999999999999999764443 45779999999999
Q ss_pred HHHhhhhhhccccccccccccCccccCCCCCCHHHHHHHHHHhHhhHHhHHHHHHHH
Q 009677 276 DLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLA 332 (529)
Q Consensus 276 ~~~~Qr~RWa~G~~qv~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~l~~i~~l~y~ 332 (529)
+.++.-+|||+|++|-+ +++ +.+++.+..|+.+....+.+ +++...++++
T Consensus 384 D~l~RDRRWC~GNLqh~-----rl~-~~~GlHwvsR~h~~tGVmsY-lsaPlWfl~l 433 (736)
T COG2943 384 DELKRDRRWCHGNLQHF-----RLF-LVKGLHWVSRAHFLTGVMSY-LSAPLWFLFL 433 (736)
T ss_pred HHHhhhhHhhhcchhhc-----eee-ccCCccHHHHHHHHHHHHHH-HhhHHHHHHH
Confidence 99999999999999976 333 35899999999998877765 5554433333
No 34
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.74 E-value=6.4e-17 Score=159.62 Aligned_cols=194 Identities=14% Similarity=0.097 Sum_probs=133.5
Q ss_pred ccccccce-EEE-EecCCCchhh--HHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCC
Q 009677 17 NSQNHSTI-IEI-IQETFGESET--IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDM 92 (529)
Q Consensus 17 ~~~~h~~~-i~v-~~~~~~~~~~--~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~ 92 (529)
..|+++.- .+| ++++++++++ +....... ++.++..+++ .+|++|+|.+++. +++|+|+++|+|.
T Consensus 52 ~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~--~v~~i~~~~~-----~g~~~a~n~gi~~----a~~d~i~~lD~D~ 120 (251)
T cd06439 52 LALDYPRDRLEIIVVSDGSTDGTAEIAREYADK--GVKLLRFPER-----RGKAAALNRALAL----ATGEIVVFTDANA 120 (251)
T ss_pred HhCcCCCCcEEEEEEECCCCccHHHHHHHHhhC--cEEEEEcCCC-----CChHHHHHHHHHH----cCCCEEEEEcccc
Confidence 35666652 333 3344444332 23333322 5777766543 6899999999999 8899999999999
Q ss_pred CCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHH-HHHHHHHHHHHhhccCC-cccccccceEeccccc
Q 009677 93 YCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGR-FRSAYCVQWQGMDGLKG-PVLSGTGYYIKRESLY 170 (529)
Q Consensus 93 ~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~-~~~f~~~~~~g~d~~~~-~~~~Gtg~v~RR~aL~ 170 (529)
+++ |+++++.+..+.+ +++++|++.....+.+. ...... ...+...........+. ....|++..+||+++
T Consensus 121 ~~~-~~~l~~l~~~~~~----~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~- 193 (251)
T cd06439 121 LLD-PDALRLLVRHFAD----PSVGAVSGELVIVDGGG-SGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELF- 193 (251)
T ss_pred CcC-HHHHHHHHHHhcC----CCccEEEeEEEecCCcc-cchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHh-
Confidence 998 9999999998864 67888888776654421 111111 11111111111122222 223555566888877
Q ss_pred cCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccccCCCCccchHHHHHHHH
Q 009677 171 ADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILH 250 (529)
Q Consensus 171 g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG~~~~svtED~~t~~~l~ 250 (529)
+ |+......||.+++.++.
T Consensus 194 -----------------------------------------------------------~--~~~~~~~~eD~~l~~~~~ 212 (251)
T cd06439 194 -----------------------------------------------------------R--PLPADTINDDFVLPLRIA 212 (251)
T ss_pred -----------------------------------------------------------c--CCCcccchhHHHHHHHHH
Confidence 2 555566789999999999
Q ss_pred hCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhccccccc
Q 009677 251 CKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDV 291 (529)
Q Consensus 251 ~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv 291 (529)
.+||++.|+++ +......|.+.+++++|+.||+.|++|.
T Consensus 213 ~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~r~~~g~~~~ 251 (251)
T cd06439 213 RQGYRVVYEPD--AVAYEEVAEDGSEEFRRRVRIAAGNLQA 251 (251)
T ss_pred HcCCeEEeccc--cEEEEeCcccHHHHHHHHHHHHhccccC
Confidence 99999999987 7789999999999999999999999983
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.65 E-value=1.5e-15 Score=148.39 Aligned_cols=197 Identities=17% Similarity=0.095 Sum_probs=134.1
Q ss_pred cccccc-ceEEE-EecCCCchh--hHHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCC
Q 009677 17 NSQNHS-TIIEI-IQETFGESE--TIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDM 92 (529)
Q Consensus 17 ~~~~h~-~~i~v-~~~~~~~~~--~~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~ 92 (529)
.+|++| .-.+| ++|++++++ ...+......|.+.++..+ .+++++|+|.|++. +++|+++++|+|.
T Consensus 23 ~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~~~~v~~i~~~------~~~~~~a~N~g~~~----a~~d~v~~lD~D~ 92 (249)
T cd02525 23 LNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDNP------KRIQSAGLNIGIRN----SRGDIIIRVDAHA 92 (249)
T ss_pred HhccCCCCccEEEEEeCCCCccHHHHHHHHHhcCCeEEEEeCC------CCCchHHHHHHHHH----hCCCEEEEECCCc
Confidence 345664 33344 334444442 2444455567888888643 24689999999999 8999999999999
Q ss_pred CCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHHH-HHHHh---hccC---CcccccccceEe
Q 009677 93 YCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCV-QWQGM---DGLK---GPVLSGTGYYIK 165 (529)
Q Consensus 93 ~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~-~~~g~---d~~~---~~~~~Gtg~v~R 165 (529)
++. |++|.+.+..+.+ ++...|+.+....+ .+++.......+.. ...+. .... .....|.+.++|
T Consensus 93 ~~~-~~~l~~~~~~~~~----~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (249)
T cd02525 93 VYP-KDYILELVEALKR----TGADNVGGPMETIG---ESKFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYR 164 (249)
T ss_pred cCC-HHHHHHHHHHHhc----CCCCEEecceecCC---CChHHHHHHHHhhchhccCCccccccccccccccccccceEE
Confidence 997 9999999987765 44555655433222 22332211111110 00110 1111 224567788888
Q ss_pred ccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCC-CccchH
Q 009677 166 RESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQ-SVSEDL 243 (529)
Q Consensus 166 R~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~-svtED~ 243 (529)
|+++ +++| ++.. ...||.
T Consensus 165 ~~~~------------------------------------------------------------~~~g~~~~~~~~~eD~ 184 (249)
T cd02525 165 REVF------------------------------------------------------------EKVGGFDESLVRNEDA 184 (249)
T ss_pred HHHH------------------------------------------------------------HHhCCCCcccCccchh
Confidence 8887 5676 6554 447999
Q ss_pred HHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhccccccccc
Q 009677 244 FTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGL 293 (529)
Q Consensus 244 ~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv~~ 293 (529)
+.+++++++|+++.|+++ +...-..|.+++.+++|+.||+.|..|...
T Consensus 185 ~l~~r~~~~G~~~~~~~~--~~~~~~~~~s~~~~~~~~~r~~~~~~~~~~ 232 (249)
T cd02525 185 ELNYRLRKAGYKIWLSPD--IRVYYYPRSTLKKLARQYFRYGKWRARTLR 232 (249)
T ss_pred HHHHHHHHcCcEEEEcCC--eEEEEcCCCCHHHHHHHHHHHhhhhHHHHH
Confidence 999999999999999987 667778899999999999999999999986
No 36
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.63 E-value=6.3e-14 Score=148.76 Aligned_cols=198 Identities=16% Similarity=0.095 Sum_probs=129.5
Q ss_pred CCccccccceEEEEe-cCCCchhh--HHHhhhccCC---cEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCC-----CC
Q 009677 15 YGNSQNHSTIIEIIQ-ETFGESET--IRQADLVEMP---LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISN-----SP 83 (529)
Q Consensus 15 ~~~~~~h~~~i~v~~-~~~~~~~~--~~~~~~~~~p---~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~-----g~ 83 (529)
+...||+|+..+|++ ||+++|++ +.++..++.| ++.+++.+.+|.. ..+|+.|+|.+++. +. +|
T Consensus 61 sL~~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~g-~~Gk~~A~n~g~~~----A~~~~~~gd 135 (384)
T TIGR03469 61 SLLEQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPPG-WSGKLWAVSQGIAA----ARTLAPPAD 135 (384)
T ss_pred HHHhCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCCC-CcchHHHHHHHHHH----HhccCCCCC
Confidence 345688885445443 44444433 4555555566 7888875544422 36899999999999 55 99
Q ss_pred EEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHH----HHHHHHH---HHhhcc-CCc
Q 009677 84 YILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFR----SAYCVQW---QGMDGL-KGP 155 (529)
Q Consensus 84 ~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~----~f~~~~~---~g~d~~-~~~ 155 (529)
+++.+|||..++ |+.+++.+..+.+ +++++|..+.++.. .+.+..... .++.... ...+.. ...
T Consensus 136 ~llflDaD~~~~-p~~l~~lv~~~~~----~~~~~vs~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (384)
T TIGR03469 136 YLLLTDADIAHG-PDNLARLVARARA----EGLDLVSLMVRLRC---ESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTA 207 (384)
T ss_pred EEEEECCCCCCC-hhHHHHHHHHHHh----CCCCEEEecccccC---CCHHHHHHHHHHHHHHHHhcchhhhcCCCccce
Confidence 999999999998 9999999999875 33445543333221 122221111 1111110 011111 112
Q ss_pred ccccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-c
Q 009677 156 VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-I 234 (529)
Q Consensus 156 ~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~ 234 (529)
...|.+.++||+++ +++| |
T Consensus 208 ~~~G~~~lirr~~~------------------------------------------------------------~~vGGf 227 (384)
T TIGR03469 208 AAAGGCILIRREAL------------------------------------------------------------ERIGGI 227 (384)
T ss_pred eecceEEEEEHHHH------------------------------------------------------------HHcCCH
Confidence 24688999999999 6786 7
Q ss_pred CC--CCccchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhcc
Q 009677 235 LY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGS 286 (529)
Q Consensus 235 ~~--~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~ 286 (529)
+. ..+.||++++.++.++|+++.+.... .......-+++.++++|+.||+.
T Consensus 228 ~~~~~~~~ED~~L~~r~~~~G~~v~~~~~~-~~~s~r~~~~~~~~~~~~~r~~~ 280 (384)
T TIGR03469 228 AAIRGALIDDCTLAAAVKRSGGRIWLGLAA-RTRSLRPYDGLGEIWRMIARTAY 280 (384)
T ss_pred HHHhhCcccHHHHHHHHHHcCCcEEEEecC-ceEEEEecCCHHHHHHHHHHhHH
Confidence 64 57899999999999999999998652 33333456799999999999953
No 37
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.61 E-value=6.3e-15 Score=140.04 Aligned_cols=153 Identities=18% Similarity=0.212 Sum_probs=116.7
Q ss_pred CCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHH
Q 009677 62 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSA 141 (529)
Q Consensus 62 ~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f 141 (529)
.+.|.+||.++++. . .++|++++.|+|..++ |++|++++..+.| |+++.|.++.++.+. +...+.-...+
T Consensus 15 ~N~Kv~nL~~~~~~-~--a~~d~~~~~DsDi~v~-p~~L~~lv~~l~~----p~vglVt~~~~~~~~--~~~~~~l~~~~ 84 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA-G--AKYDYLVISDSDIRVP-PDYLRELVAPLAD----PGVGLVTGLPRGVPA--RGFWSRLEAAF 84 (175)
T ss_pred CChHHHHHHHHHHh-h--CCCCEEEEECCCeeEC-HHHHHHHHHHHhC----CCCcEEEecccccCC--cCHHHHHHHHH
Confidence 47899999999996 3 7999999999999998 9999999999985 789999876665443 23222222223
Q ss_pred HHHHHHHhh-ccCCcccccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhcccccc
Q 009677 142 YCVQWQGMD-GLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASC 220 (529)
Q Consensus 142 ~~~~~~g~d-~~~~~~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c 220 (529)
+.....-.. .-+..++.|..+.+||++|
T Consensus 85 ~~~~~~~~~a~~~~~~~~G~~m~~rr~~L--------------------------------------------------- 113 (175)
T PF13506_consen 85 FNFLPGVLQALGGAPFAWGGSMAFRREAL--------------------------------------------------- 113 (175)
T ss_pred HhHHHHHHHHhcCCCceecceeeeEHHHH---------------------------------------------------
Confidence 322111111 2245677899999999999
Q ss_pred ccccccccccccc-cCC--CCccchHHHHHHHHhCCCeEEEeCCCCCceecccC----CCHHHHHhhhhhhcc
Q 009677 221 SYEHQTKWGEEVG-ILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTST----TNLNDLLIQGTRWGS 286 (529)
Q Consensus 221 ~ye~~t~wg~~iG-~~~--~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP----~~l~~~~~Qr~RWa~ 286 (529)
+++| +.. +.++||+.+|-+++.+|||++..+. ++.....| .+++++++++.||++
T Consensus 114 ---------~~~GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~~--~v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 114 ---------EEIGGFEALADYLADDYALGRRLRARGYRVVLSPY--PVVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred ---------HHcccHHHHhhhhhHHHHHHHHHHHCCCeEEEcch--heeecccCccccccHHHHHHHHHhhcC
Confidence 5675 543 6899999999999999999999885 55555666 589999999999985
No 38
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.55 E-value=7.1e-14 Score=133.53 Aligned_cols=118 Identities=15% Similarity=0.081 Sum_probs=86.3
Q ss_pred ccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcC-------CCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCce
Q 009677 44 VEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSG-------VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSL 116 (529)
Q Consensus 44 ~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~-------~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~v 116 (529)
...+++.++.++... .+.+|++|+|.+++.+. .-.++|+|+++|||..++ |++|+++..+|. +|++
T Consensus 47 ~~~~~v~~i~~~~~~--~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~-~~~l~~~~~~~~----~~~v 119 (191)
T cd06436 47 ITDSRVHLLRRHLPN--ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRLD-PNALEAVAPYFS----DPRV 119 (191)
T ss_pred ecCCcEEEEeccCCc--CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCcC-HhHHHHHHHhhc----CCce
Confidence 345789988875321 13689999999999831 001358999999999998 999999877776 4889
Q ss_pred EEEccCceeccCCCcchHHH----HHHHHHHHHHHHhhccCCcccccccceEecccc
Q 009677 117 AFVQFPQKFHNINKYDIYDG----RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESL 169 (529)
Q Consensus 117 a~VQ~pq~f~n~~~~d~~~~----~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL 169 (529)
+.||.+.+++|.+. ..+.. +...++..++.++...+...++|+|+++||++|
T Consensus 120 ~~v~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l 175 (191)
T cd06436 120 AGTQSRVRMYNRHK-NLLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSAL 175 (191)
T ss_pred EEEeeeEEEecCCC-CHHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHH
Confidence 99999999988643 23221 222334566777776665557999999999999
No 39
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.42 E-value=1.2e-12 Score=124.41 Aligned_cols=165 Identities=15% Similarity=0.062 Sum_probs=113.9
Q ss_pred ccccccceEEEEecCCC-chhh--HHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCC
Q 009677 17 NSQNHSTIIEIIQETFG-ESET--IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY 93 (529)
Q Consensus 17 ~~~~h~~~i~v~~~~~~-~~~~--~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~ 93 (529)
..|+++..--|++++++ ++++ +++....+.| +.++.++++ .++++|+|.|++. ++||||+++|+|.+
T Consensus 23 ~~q~~~~~eiiivdd~ss~d~t~~~~~~~~~~~~-i~~i~~~~n-----~G~~~a~N~g~~~----a~gd~i~~lD~Dd~ 92 (201)
T cd04195 23 LKQTLPPDEVVLVKDGPVTQSLNEVLEEFKRKLP-LKVVPLEKN-----RGLGKALNEGLKH----CTYDWVARMDTDDI 92 (201)
T ss_pred HhcCCCCcEEEEEECCCCchhHHHHHHHHHhcCC-eEEEEcCcc-----ccHHHHHHHHHHh----cCCCEEEEeCCccc
Confidence 45666543224444444 4322 3444455556 888887665 6899999999999 89999999999999
Q ss_pred CCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHH----HHHHHHHHHHHhhccCCcccccccceEecccc
Q 009677 94 CNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGR----FRSAYCVQWQGMDGLKGPVLSGTGYYIKRESL 169 (529)
Q Consensus 94 ~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~----~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL 169 (529)
+. |+++++++..+.+ ++++++|.+.....+.+........ ....+... . ....++|.+.++||+++
T Consensus 93 ~~-~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~rr~~~ 162 (201)
T cd04195 93 SL-PDRFEKQLDFIEK---NPEIDIVGGGVLEFDSDGNDIGKRRLPTSHDDILKFA---R---RRSPFNHPTVMFRKSKV 162 (201)
T ss_pred cC-cHHHHHHHHHHHh---CCCeEEEcccEEEECCCCCeeccccCCCCHHHHHHHh---c---cCCCCCChHHhhhHHHH
Confidence 98 9999999999863 5788888887665544322111110 01111111 1 11223566788999888
Q ss_pred ccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCCCccchHHHHHH
Q 009677 170 YADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSVSEDLFTGFI 248 (529)
Q Consensus 170 ~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~svtED~~t~~~ 248 (529)
+++| |......||.++..+
T Consensus 163 ------------------------------------------------------------~~~g~~~~~~~~eD~~~~~r 182 (201)
T cd04195 163 ------------------------------------------------------------LAVGGYQDLPLVEDYALWAR 182 (201)
T ss_pred ------------------------------------------------------------HHcCCcCCCCCchHHHHHHH
Confidence 5676 877788999999999
Q ss_pred HHhCCCeEEEeCC
Q 009677 249 LHCKGWTSTYLTP 261 (529)
Q Consensus 249 l~~~Gwrs~y~~~ 261 (529)
+..+|+++.|+++
T Consensus 183 ~~~~g~~~~~~~~ 195 (201)
T cd04195 183 MLANGARFANLPE 195 (201)
T ss_pred HHHcCCceecccH
Confidence 9999999999975
No 40
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.37 E-value=3.1e-12 Score=120.90 Aligned_cols=101 Identities=18% Similarity=0.111 Sum_probs=71.6
Q ss_pred CCCcHHHHHHHHHhcC-CCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHH---
Q 009677 62 HHFKAGALNVLLRVSG-VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGR--- 137 (529)
Q Consensus 62 ~~~KAGaLN~~L~~s~-~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~--- 137 (529)
+.+|++|+|.+++.+. .-+++|+++++|||..++ |+++.+++..|.+ ++ ..||+.....+.+. ..+...
T Consensus 61 ~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~~-p~~l~~l~~~~~~---~~--~~v~g~~~~~~~~~-~~~~~~~~~ 133 (183)
T cd06438 61 RRGKGYALDFGFRHLLNLADDPDAVVVFDADNLVD-PNALEELNARFAA---GA--RVVQAYYNSKNPDD-SWITRLYAF 133 (183)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCCC-hhHHHHHHHHHhh---CC--CeeEEEEeeeCCcc-CHHHHHHHH
Confidence 4689999999999731 014699999999999998 9999999998864 33 45787766655432 223222
Q ss_pred -HHHHHHHHHHHhhccCCcc-cccccceEecccc
Q 009677 138 -FRSAYCVQWQGMDGLKGPV-LSGTGYYIKRESL 169 (529)
Q Consensus 138 -~~~f~~~~~~g~d~~~~~~-~~Gtg~v~RR~aL 169 (529)
...+......++..+++.. +.|+|+++||+++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l 167 (183)
T cd06438 134 AFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVL 167 (183)
T ss_pred HHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHH
Confidence 2223334445666676654 5899999999999
No 41
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.28 E-value=2.2e-11 Score=115.65 Aligned_cols=166 Identities=13% Similarity=0.055 Sum_probs=107.8
Q ss_pred ccccccceEEEEecCCCchh---hHHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCC
Q 009677 17 NSQNHSTIIEIIQETFGESE---TIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY 93 (529)
Q Consensus 17 ~~~~h~~~i~v~~~~~~~~~---~~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~ 93 (529)
.+|+++..--|++++++.++ .+.+......+++.++..+++ .+++.|+|.+++. +++||++++|+|.+
T Consensus 25 ~~q~~~~~eiivvd~gs~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~a~n~g~~~----a~~d~i~~ld~D~~ 95 (202)
T cd04184 25 RAQTYPNWELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREEN-----GGISAATNSALEL----ATGEFVALLDHDDE 95 (202)
T ss_pred HhCcCCCeEEEEEeCCCCChHHHHHHHHHHhcCCCEEEEEcccC-----CCHHHHHHHHHHh----hcCCEEEEECCCCc
Confidence 44666653224444444332 233333445677888766543 6899999999999 89999999999999
Q ss_pred CCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHHHHHHHhhccCCcccccccceEeccccccCC
Q 009677 94 CNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADF 173 (529)
Q Consensus 94 ~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL~g~p 173 (529)
+. |++|.+.+..+.. ++++++|.++......+. ..... .+.... ..+......+.|.++++||+++
T Consensus 96 ~~-~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~-~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~r~~~---- 161 (202)
T cd04184 96 LA-PHALYEVVKALNE---HPDADLIYSDEDKIDEGG-KRSEP----FFKPDW-SPDLLLSQNYIGHLLVYRRSLV---- 161 (202)
T ss_pred CC-hHHHHHHHHHHHh---CCCCCEEEccHHhccCCC-CEecc----ccCCCC-CHHHhhhcCCccceEeEEHHHH----
Confidence 98 9999999988832 466777766554322111 00000 000000 0001111134566778999998
Q ss_pred chhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCC-CccchHHHHHHHHh
Q 009677 174 THTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQ-SVSEDLFTGFILHC 251 (529)
Q Consensus 174 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~-svtED~~t~~~l~~ 251 (529)
+++| |+.+ ...||.+.++|++.
T Consensus 162 --------------------------------------------------------~~iggf~~~~~~~eD~~l~~rl~~ 185 (202)
T cd04184 162 --------------------------------------------------------RQVGGFREGFEGAQDYDLVLRVSE 185 (202)
T ss_pred --------------------------------------------------------HHhCCCCcCcccchhHHHHHHHHh
Confidence 5776 7665 45799999999999
Q ss_pred CCCeEEEeCC
Q 009677 252 KGWTSTYLTP 261 (529)
Q Consensus 252 ~Gwrs~y~~~ 261 (529)
+||+..|+++
T Consensus 186 ~g~~~~~~~~ 195 (202)
T cd04184 186 HTDRIAHIPR 195 (202)
T ss_pred ccceEEEccH
Confidence 9999999986
No 42
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.22 E-value=6.2e-11 Score=111.32 Aligned_cols=163 Identities=18% Similarity=0.059 Sum_probs=105.8
Q ss_pred ccccccceEEEEe-cCCCchhh--HHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCC
Q 009677 17 NSQNHSTIIEIIQ-ETFGESET--IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY 93 (529)
Q Consensus 17 ~~~~h~~~i~v~~-~~~~~~~~--~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~ 93 (529)
..|+++. .+|++ |+.+++++ ..+....+ +.++..+++ .++++|+|.|++. +++|||+++|+|..
T Consensus 21 ~~q~~~~-~evivvDd~s~d~~~~~~~~~~~~---~~~~~~~~~-----~g~~~a~n~~~~~----a~~~~v~~ld~D~~ 87 (202)
T cd06433 21 LSQTYPN-IEYIVIDGGSTDGTVDIIKKYEDK---ITYWISEPD-----KGIYDAMNKGIAL----ATGDIIGFLNSDDT 87 (202)
T ss_pred HhCCCCC-ceEEEEeCCCCccHHHHHHHhHhh---cEEEEecCC-----cCHHHHHHHHHHH----cCCCEEEEeCCCcc
Confidence 4566666 44444 44443322 23332222 445544443 6899999999999 89999999999999
Q ss_pred CCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHHHHHHHhhccCCcccccccceEeccccccCC
Q 009677 94 CNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADF 173 (529)
Q Consensus 94 ~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL~g~p 173 (529)
+. |+.+.+.+..+.. .++..+|.+...+.+.+........ ...............+|++.++||+++
T Consensus 88 ~~-~~~~~~~~~~~~~---~~~~~~v~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 154 (202)
T cd06433 88 LL-PGALLAVVAAFAE---HPEVDVVYGDVLLVDENGRVIGRRR-----PPPFLDKFLLYGMPICHQATFFRRSLF---- 154 (202)
T ss_pred cC-chHHHHHHHHHHh---CCCccEEEeeeEEEcCCCCcccCCC-----CcchhhhHHhhcCcccCcceEEEHHHH----
Confidence 98 8999998855542 4667777776655443321111100 000111122233455788889999998
Q ss_pred chhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCC-CccchHHHHHHHHh
Q 009677 174 THTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQ-SVSEDLFTGFILHC 251 (529)
Q Consensus 174 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~-svtED~~t~~~l~~ 251 (529)
+++| |..+ ...||.+..+++..
T Consensus 155 --------------------------------------------------------~~~~~f~~~~~~~~D~~~~~r~~~ 178 (202)
T cd06433 155 --------------------------------------------------------EKYGGFDESYRIAADYDLLLRLLL 178 (202)
T ss_pred --------------------------------------------------------HHhCCCchhhCchhhHHHHHHHHH
Confidence 5776 6654 56899999999999
Q ss_pred CCCeEEEeCC
Q 009677 252 KGWTSTYLTP 261 (529)
Q Consensus 252 ~Gwrs~y~~~ 261 (529)
+|++..|+++
T Consensus 179 ~g~~~~~~~~ 188 (202)
T cd06433 179 AGKIFKYLPE 188 (202)
T ss_pred cCCceEecch
Confidence 9999988875
No 43
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.20 E-value=1.5e-10 Score=105.47 Aligned_cols=109 Identities=19% Similarity=0.209 Sum_probs=89.8
Q ss_pred CCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCcee
Q 009677 46 MPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKF 125 (529)
Q Consensus 46 ~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f 125 (529)
.+++.++..+++ .++++|+|.+++. +++|+++.+|+|.++. |+++.+.+..+.+ +++++++...
T Consensus 48 ~~~~~~~~~~~~-----~g~~~a~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~---~~~~~~~~~~--- 111 (166)
T cd04186 48 FPEVRLIRNGEN-----LGFGAGNNQGIRE----AKGDYVLLLNPDTVVE-PGALLELLDAAEQ---DPDVGIVGPK--- 111 (166)
T ss_pred CCCeEEEecCCC-----cChHHHhhHHHhh----CCCCEEEEECCCcEEC-ccHHHHHHHHHHh---CCCceEEEcc---
Confidence 346777766543 6899999999999 7999999999999998 9999999987764 5778777543
Q ss_pred ccCCCcchHHHHHHHHHHHHHHHhhccCCcccccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCC
Q 009677 126 HNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGEN 205 (529)
Q Consensus 126 ~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 205 (529)
++|++.++||+++
T Consensus 112 -------------------------------~~~~~~~~~~~~~------------------------------------ 124 (166)
T cd04186 112 -------------------------------VSGAFLLVRREVF------------------------------------ 124 (166)
T ss_pred -------------------------------CceeeEeeeHHHH------------------------------------
Confidence 6789999999988
Q ss_pred chhhhHHhhccccccccccccccccccc-cCCCC--ccchHHHHHHHHhCCCeEEEeCC
Q 009677 206 FSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQS--VSEDLFTGFILHCKGWTSTYLTP 261 (529)
Q Consensus 206 ~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~s--vtED~~t~~~l~~~Gwrs~y~~~ 261 (529)
+++| |+... ..||.+.++++..+||++.++++
T Consensus 125 ------------------------~~~~~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~ 159 (166)
T cd04186 125 ------------------------EEVGGFDEDFFLYYEDVDLCLRARLAGYRVLYVPQ 159 (166)
T ss_pred ------------------------HHcCCCChhhhccccHHHHHHHHHHcCCeEEEccc
Confidence 5665 66543 46999999999999999999986
No 44
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.19 E-value=4.9e-11 Score=116.31 Aligned_cols=146 Identities=16% Similarity=0.065 Sum_probs=93.1
Q ss_pred cCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHH---hhhcCCCCCCceEEEcc
Q 009677 45 EMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM---CFHLDPKISSSLAFVQF 121 (529)
Q Consensus 45 ~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l---~~f~d~~~~~~va~VQ~ 121 (529)
..+++.++..+++ .++++|+|.|++.+.. .++|||+.+|+|.+++ |++|.+++ ..+. .+++++.+ .
T Consensus 45 ~~~~i~~i~~~~n-----~G~~~a~N~g~~~a~~-~~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~---~~~~~~~~-~ 113 (237)
T cd02526 45 NSEKIELIHLGEN-----LGIAKALNIGIKAALE-NGADYVLLFDQDSVPP-PDMVEKLLAYKILSD---KNSNIGAV-G 113 (237)
T ss_pred cCCcEEEEECCCc-----eehHHhhhHHHHHHHh-CCCCEEEEECCCCCcC-HhHHHHHHHHHHhhc---cCCCeEEE-e
Confidence 3578888887665 5699999999998211 1459999999999998 99999985 2222 25677765 4
Q ss_pred CceeccCCCcchHHHHHHH-HHH-HHHHHhhccCCcccccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhccc
Q 009677 122 PQKFHNINKYDIYDGRFRS-AYC-VQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQN 199 (529)
Q Consensus 122 pq~f~n~~~~d~~~~~~~~-f~~-~~~~g~d~~~~~~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~ 199 (529)
|+................. ... ...............|+|+++||+++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~------------------------------ 163 (237)
T cd02526 114 PRIIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEAL------------------------------ 163 (237)
T ss_pred eeEEcCCCCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHH------------------------------
Confidence 5544322111100000000 000 00000111122344688999999998
Q ss_pred CCCCCCchhhhHHhhccccccccccccccccccc-cCCCCc--cchHHHHHHHHhCCCeEEEeCC
Q 009677 200 NANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSV--SEDLFTGFILHCKGWTSTYLTP 261 (529)
Q Consensus 200 ~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~sv--tED~~t~~~l~~~Gwrs~y~~~ 261 (529)
+++| |+.... .||++.++|+..+||+..|+++
T Consensus 164 ------------------------------~~~ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~ 198 (237)
T cd02526 164 ------------------------------EKVGGFDEDLFIDYVDTEWCLRARSKGYKIYVVPD 198 (237)
T ss_pred ------------------------------HHhCCCCHHHcCccchHHHHHHHHHcCCcEEEEcC
Confidence 5676 765432 5899999999999999999986
No 45
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.15 E-value=2.7e-10 Score=116.42 Aligned_cols=57 Identities=14% Similarity=-0.013 Sum_probs=50.1
Q ss_pred hccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcC
Q 009677 43 LVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 109 (529)
Q Consensus 43 ~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d 109 (529)
....|++.++..+++ .+++.|.|.|++. +.||||+.+|+|..+. |++|.+.+..+.+
T Consensus 54 ~~~~~~v~vi~~~~n-----~G~~~a~N~g~~~----A~gd~i~fLD~D~~~~-~~wL~~ll~~l~~ 110 (299)
T cd02510 54 KKYLPKVKVLRLKKR-----EGLIRARIAGARA----ATGDVLVFLDSHCEVN-VGWLEPLLARIAE 110 (299)
T ss_pred hhcCCcEEEEEcCCC-----CCHHHHHHHHHHH----ccCCEEEEEeCCcccC-ccHHHHHHHHHHh
Confidence 345688999987654 6899999999999 8999999999999997 9999999998864
No 46
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.11 E-value=1.5e-09 Score=104.81 Aligned_cols=150 Identities=13% Similarity=0.007 Sum_probs=96.4
Q ss_pred HHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceE
Q 009677 38 IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLA 117 (529)
Q Consensus 38 ~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va 117 (529)
+........|.+.++..+++ .+|++|+|.|++. +.+|+|+.+|+|..++ |+.|.+.+..+.+ ++.+
T Consensus 44 ~~~~~~~~~~~i~~~~~~~n-----~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~----~~~~ 109 (224)
T cd06442 44 IVRELAKEYPRVRLIVRPGK-----RGLGSAYIEGFKA----ARGDVIVVMDADLSHP-PEYIPELLEAQLE----GGAD 109 (224)
T ss_pred HHHHHHHhCCceEEEecCCC-----CChHHHHHHHHHH----cCCCEEEEEECCCCCC-HHHHHHHHHHHhc----CCCC
Confidence 34445556788888877665 6899999999999 8999999999999997 9999999998765 3334
Q ss_pred EEccCceeccCC-CcchHHHH-HHHHHHHHHHHhhccCCcccccccceEeccccccCCchhhhhhccCCchhhHhhhhhh
Q 009677 118 FVQFPQKFHNIN-KYDIYDGR-FRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQS 195 (529)
Q Consensus 118 ~VQ~pq~f~n~~-~~d~~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~ 195 (529)
+|.++....... .+.++... .........+-....+.....|++.++||+++
T Consensus 110 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~-------------------------- 163 (224)
T cd06442 110 LVIGSRYVEGGGVEGWGLKRKLISRGANLLARLLLGRKVSDPTSGFRAYRREVL-------------------------- 163 (224)
T ss_pred EEEEeeeecCCccCCCcHHHHHHHHHHHHHHHHHcCCCCCCCCCccchhhHHHH--------------------------
Confidence 454443222111 11111111 00111111111112233344666678899998
Q ss_pred hcccCCCCCCchhhhHHhhccccccccccccccccccc--cCCCCccchHHHHHHHHhCCCeEEEeCC
Q 009677 196 YKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG--ILYQSVSEDLFTGFILHCKGWTSTYLTP 261 (529)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG--~~~~svtED~~t~~~l~~~Gwrs~y~~~ 261 (529)
+++| +......+|.+..+++...||++.+.+.
T Consensus 164 ----------------------------------~~ig~~~~~~~~~~~~~l~~~~~~~g~~i~~~p~ 197 (224)
T cd06442 164 ----------------------------------EKLIDSLVSKGYKFQLELLVRARRLGYRIVEVPI 197 (224)
T ss_pred ----------------------------------HHHhhhccCCCcEEeHHHHHHHHHcCCeEEEeCe
Confidence 4554 3334456788899999999999999874
No 47
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.10 E-value=2.8e-10 Score=115.05 Aligned_cols=164 Identities=15% Similarity=-0.002 Sum_probs=103.2
Q ss_pred EEecCCCchhhHHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhh
Q 009677 27 IIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF 106 (529)
Q Consensus 27 v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~ 106 (529)
|++||++++....+......|++.|++.++| .+.|+|+|.|++.+-. .++|||+.+|.|.+++ |+.+.+.+..
T Consensus 25 iVVDN~S~~~~~~~~~~~~~~~i~~i~~~~N-----~G~a~a~N~Gi~~a~~-~~~d~i~~lD~D~~~~-~~~l~~l~~~ 97 (281)
T TIGR01556 25 IAVDNSPHSDQPLKNARLRGQKIALIHLGDN-----QGIAGAQNQGLDASFR-RGVQGVLLLDQDSRPG-NAFLAAQWKL 97 (281)
T ss_pred EEEECcCCCcHhHHHHhccCCCeEEEECCCC-----cchHHHHHHHHHHHHH-CCCCEEEEECCCCCCC-HHHHHHHHHH
Confidence 4445553222122333445689999987665 6899999999998310 2689999999999998 8999999988
Q ss_pred hcCCCCCCceEEEccCceeccCCCcchHHH--HHHHHHHHH-HHHhhc-cCCcccccccceEeccccccCCchhhhhhcc
Q 009677 107 HLDPKISSSLAFVQFPQKFHNINKYDIYDG--RFRSAYCVQ-WQGMDG-LKGPVLSGTGYYIKRESLYADFTHTELKDTF 182 (529)
Q Consensus 107 f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~--~~~~f~~~~-~~g~d~-~~~~~~~Gtg~v~RR~aL~g~p~~~~~~~~~ 182 (529)
+.. .+.++++|. |..+. .+....+.. ......... ...... ....+..++|+++||+++
T Consensus 98 ~~~--~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~li~~~~~------------- 160 (281)
T TIGR01556 98 LSA--ENGQACALG-PRFFD-RGTSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCLITREVY------------- 160 (281)
T ss_pred HHh--cCCceEEEC-CeEEc-CCCcccCCceeecccceeeecccccCCceeccEEEcCcceeeHHHH-------------
Confidence 754 123788775 44333 221111110 000000000 000011 112344678899999998
Q ss_pred CCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCC--CccchHHHHHHHHhCCCeEEEe
Q 009677 183 GKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQ--SVSEDLFTGFILHCKGWTSTYL 259 (529)
Q Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~--svtED~~t~~~l~~~Gwrs~y~ 259 (529)
+++| |+++ .=.||.+.++|+.++||++.|+
T Consensus 161 -----------------------------------------------~~iG~fde~~fi~~~D~e~~~R~~~~G~~i~~~ 193 (281)
T TIGR01556 161 -----------------------------------------------QRLGMMDEELFIDHVDTEWSLRAQNYGIPLYID 193 (281)
T ss_pred -----------------------------------------------HHhCCccHhhcccchHHHHHHHHHHCCCEEEEe
Confidence 5777 5543 2258999999999999999999
Q ss_pred CC
Q 009677 260 TP 261 (529)
Q Consensus 260 ~~ 261 (529)
++
T Consensus 194 ~~ 195 (281)
T TIGR01556 194 PD 195 (281)
T ss_pred CC
Confidence 86
No 48
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.10 E-value=2.6e-09 Score=105.81 Aligned_cols=159 Identities=11% Similarity=0.002 Sum_probs=98.3
Q ss_pred EecCCCchhh--HHHhhhccC--CcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHH
Q 009677 28 IQETFGESET--IRQADLVEM--PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 103 (529)
Q Consensus 28 ~~~~~~~~~~--~~~~~~~~~--p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~ 103 (529)
++||++++++ ++.+...+. +.+.++.++++ .+|++|+|.|++. ++||||+++|+|..++ |+.|.+.
T Consensus 45 vvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n-----~G~~~a~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~l 114 (243)
T PLN02726 45 VVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGK-----LGLGTAYIHGLKH----ASGDFVVIMDADLSHH-PKYLPSF 114 (243)
T ss_pred EEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCCC-----CCHHHHHHHHHHH----cCCCEEEEEcCCCCCC-HHHHHHH
Confidence 3344443332 344444444 36777766544 5899999999999 8999999999999987 9999999
Q ss_pred HhhhcCCCCCCceEEEccCceeccCCCcc--hHH-HHHHHHHHHHHHHhhccCCcccccccceEeccccccCCchhhhhh
Q 009677 104 MCFHLDPKISSSLAFVQFPQKFHNINKYD--IYD-GRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKD 180 (529)
Q Consensus 104 l~~f~d~~~~~~va~VQ~pq~f~n~~~~d--~~~-~~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL~g~p~~~~~~~ 180 (529)
+..+.+ ++..+|.... +.+..... .+. +....++.....-..+.+..-.+|...++||+++
T Consensus 115 ~~~~~~----~~~~~v~g~r-~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~d~~g~~~~~rr~~~----------- 178 (243)
T PLN02726 115 IKKQRE----TGADIVTGTR-YVKGGGVHGWDLRRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKRSAL----------- 178 (243)
T ss_pred HHHHHh----cCCcEEEEcc-ccCCCCcCCccHHHHHHHHHHHHHHHHHhCCCCCcCCCcccceeHHHH-----------
Confidence 988864 3445555442 22211101 111 1111122222222222233334566678899998
Q ss_pred ccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc--cCCCCccchHHHHHHHHhCCCeEEE
Q 009677 181 TFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG--ILYQSVSEDLFTGFILHCKGWTSTY 258 (529)
Q Consensus 181 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG--~~~~svtED~~t~~~l~~~Gwrs~y 258 (529)
+++| ...+...+|+++.+++..+||+..+
T Consensus 179 -------------------------------------------------~~i~~~~~~~~~~~~~el~~~~~~~g~~i~~ 209 (243)
T PLN02726 179 -------------------------------------------------EDLVSSVVSKGYVFQMEIIVRASRKGYRIEE 209 (243)
T ss_pred -------------------------------------------------HHHHhhccCCCcEEehHHHHHHHHcCCcEEE
Confidence 3443 2223446799999999999999999
Q ss_pred eCC
Q 009677 259 LTP 261 (529)
Q Consensus 259 ~~~ 261 (529)
+|-
T Consensus 210 vp~ 212 (243)
T PLN02726 210 VPI 212 (243)
T ss_pred eCc
Confidence 973
No 49
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.09 E-value=1.5e-09 Score=101.43 Aligned_cols=117 Identities=15% Similarity=0.052 Sum_probs=83.2
Q ss_pred cEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceecc
Q 009677 48 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHN 127 (529)
Q Consensus 48 ~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n 127 (529)
.+.++.+++. ..+|++++|.+++. ++||||+++|+|.+++ |++|++.+..+ + ++++ |..++...+
T Consensus 54 ~~~~~~~~~~----~~~~~~~~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~~~~~~-~----~~~~-v~g~~~~~~ 118 (182)
T cd06420 54 PIKHVWQEDE----GFRKAKIRNKAIAA----AKGDYLIFIDGDCIPH-PDFIADHIELA-E----PGVF-LSGSRVLLN 118 (182)
T ss_pred ceEEEEcCCc----chhHHHHHHHHHHH----hcCCEEEEEcCCcccC-HHHHHHHHHHh-C----CCcE-Eecceeecc
Confidence 3455554332 24799999999999 8999999999999998 99999999876 3 3444 445544433
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhccCCcccccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCch
Q 009677 128 INKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFS 207 (529)
Q Consensus 128 ~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 207 (529)
.+... ..+.|+++.++|+++
T Consensus 119 ~~~~~----------------------~~~~~~~~~~~r~~~-------------------------------------- 138 (182)
T cd06420 119 EKLTE----------------------RGIRGCNMSFWKKDL-------------------------------------- 138 (182)
T ss_pred cccce----------------------eEeccceEEEEHHHH--------------------------------------
Confidence 21110 234677888888887
Q ss_pred hhhHHhhccccccccccccccccccc-cCCCC---ccchHHHHHHHHhCCCeEEEeCC
Q 009677 208 NVLQEETGVLASCSYEHQTKWGEEVG-ILYQS---VSEDLFTGFILHCKGWTSTYLTP 261 (529)
Q Consensus 208 ~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~s---vtED~~t~~~l~~~Gwrs~y~~~ 261 (529)
.++| |.... -.||++.++|+.++|++..++.+
T Consensus 139 ----------------------~~~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~ 174 (182)
T cd06420 139 ----------------------LAVNGFDEEFTGWGGEDSELVARLLNSGIKFRKLKF 174 (182)
T ss_pred ----------------------HHhCCCCcccccCCcchHHHHHHHHHcCCcEEEecc
Confidence 3454 65542 27999999999999977776653
No 50
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.06 E-value=1.3e-09 Score=104.03 Aligned_cols=170 Identities=15% Similarity=0.090 Sum_probs=107.9
Q ss_pred ccccccceEEEEecCCCchh--hHHHhhhccCC-cEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCC
Q 009677 17 NSQNHSTIIEIIQETFGESE--TIRQADLVEMP-LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY 93 (529)
Q Consensus 17 ~~~~h~~~i~v~~~~~~~~~--~~~~~~~~~~p-~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~ 93 (529)
..|+++..--|++|++++++ +++.....+.| .+.++..+++ +++++|+|.+++. ++||||+++|+|.+
T Consensus 21 ~~q~~~~~eiiVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~-----~G~~~~~n~g~~~----~~g~~v~~ld~Dd~ 91 (214)
T cd04196 21 LAQTYKNDELIISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKN-----LGVARNFESLLQA----ADGDYVFFCDQDDI 91 (214)
T ss_pred HhCcCCCeEEEEEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCC-----ccHHHHHHHHHHh----CCCCEEEEECCCcc
Confidence 34555543223444444333 34555566665 4555554443 7999999999999 89999999999999
Q ss_pred CCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHHH--HHHHhhccCCcccccccceEecccccc
Q 009677 94 CNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCV--QWQGMDGLKGPVLSGTGYYIKRESLYA 171 (529)
Q Consensus 94 ~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~--~~~g~d~~~~~~~~Gtg~v~RR~aL~g 171 (529)
+. |+.|.+.+..+.. +++.+++.+.....+.+. ............. ............+.|+++++||+++
T Consensus 92 ~~-~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~-- 164 (214)
T cd04196 92 WL-PDKLERLLKAFLK---DDKPLLVYSDLELVDENG-NPIGESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELL-- 164 (214)
T ss_pred cC-hhHHHHHHHHHhc---CCCceEEecCcEEECCCC-CCcccccccccccCCccCHHHHHHhCccCCceeeEEHHHH--
Confidence 98 9999999988553 467777877765543321 1111100000000 0001111122345788999999998
Q ss_pred CCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCC-CccchHHHHHHH
Q 009677 172 DFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQ-SVSEDLFTGFIL 249 (529)
Q Consensus 172 ~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~-svtED~~t~~~l 249 (529)
+++| +... ...||.....++
T Consensus 165 ----------------------------------------------------------~~~~~~~~~~~~~~D~~~~~~~ 186 (214)
T cd04196 165 ----------------------------------------------------------ELALPFPDADVIMHDWWLALLA 186 (214)
T ss_pred ----------------------------------------------------------HhhccccccccccchHHHHHHH
Confidence 5666 6665 678999999888
Q ss_pred HhCCCeEEEeCC
Q 009677 250 HCKGWTSTYLTP 261 (529)
Q Consensus 250 ~~~Gwrs~y~~~ 261 (529)
.. |++..|+++
T Consensus 187 ~~-~~~~~~~~~ 197 (214)
T cd04196 187 SA-FGKVVFLDE 197 (214)
T ss_pred HH-cCceEEcch
Confidence 77 668888875
No 51
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.05 E-value=3.1e-09 Score=102.37 Aligned_cols=129 Identities=18% Similarity=0.116 Sum_probs=84.7
Q ss_pred CcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceec
Q 009677 47 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFH 126 (529)
Q Consensus 47 p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~ 126 (529)
+++.++.. + .+|++|+|.|++. +++|+|+++|+|.++. |+++++.+..+.+ ++...+.....+.
T Consensus 49 ~~~~~~~~--~-----~g~~~a~n~g~~~----a~~~~i~~~D~D~~~~-~~~l~~l~~~~~~----~~~~~~~~~~~~~ 112 (221)
T cd02522 49 AGVVVISS--P-----KGRARQMNAGAAA----ARGDWLLFLHADTRLP-PDWDAAIIETLRA----DGAVAGAFRLRFD 112 (221)
T ss_pred CCeEEEeC--C-----cCHHHHHHHHHHh----ccCCEEEEEcCCCCCC-hhHHHHHHHHhhc----CCcEEEEEEeeec
Confidence 66666642 2 4689999999999 8899999999999998 9999998666553 2333333223332
Q ss_pred cCCCcchHHHHHHHHHHHHHHHhhccCCcccccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCc
Q 009677 127 NINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENF 206 (529)
Q Consensus 127 n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 206 (529)
+. +.... +...............+.+.|.++||+++
T Consensus 113 ~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~r~~~~------------------------------------- 148 (221)
T cd02522 113 DP---GPRLR----LLELGANLRSRLFGLPYGDQGLFIRRELF------------------------------------- 148 (221)
T ss_pred CC---ccchh----hhhhcccceecccCCCcCCceEEEEHHHH-------------------------------------
Confidence 22 11111 01111111111122223456778888877
Q ss_pred hhhhHHhhccccccccccccccccccc-cCCCCccchHHHHHHHHhCCCeEEE
Q 009677 207 SNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSVSEDLFTGFILHCKGWTSTY 258 (529)
Q Consensus 207 ~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~svtED~~t~~~l~~~Gwrs~y 258 (529)
+++| |++....||++.+.|+..+|++..+
T Consensus 149 -----------------------~~~G~fd~~~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 149 -----------------------EELGGFPELPLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred -----------------------HHhCCCCccccccHHHHHHHHHhCCCEEEc
Confidence 5787 8888899999999999999999866
No 52
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.00 E-value=1e-08 Score=99.40 Aligned_cols=87 Identities=15% Similarity=0.039 Sum_probs=59.2
Q ss_pred ccccccceEEEEe-cCCCchh--hHHHhhhcc--CCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCC
Q 009677 17 NSQNHSTIIEIIQ-ETFGESE--TIRQADLVE--MPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCD 91 (529)
Q Consensus 17 ~~~~h~~~i~v~~-~~~~~~~--~~~~~~~~~--~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD 91 (529)
..|+++.-.+|++ |+++.++ ++++....+ .+++.++..+.+.+ ...+.+.|.|.|++. ++|||++.+|+|
T Consensus 20 ~~q~~~~~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~a~N~g~~~----a~gd~i~~lD~D 94 (219)
T cd06913 20 LQQDFEGTLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSP-SPKGVGYAKNQAIAQ----SSGRYLCFLDSD 94 (219)
T ss_pred HhCCCCCCEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccCC-CCccHHHHHHHHHHh----cCCCEEEEECCC
Confidence 4566764355444 4433332 244443333 45677776654321 136899999999999 999999999999
Q ss_pred CCCCCchHHHHHHhhhcC
Q 009677 92 MYCNDPTSARQAMCFHLD 109 (529)
Q Consensus 92 ~~~~~p~~l~~~l~~f~d 109 (529)
.+++ |+.+.+.+..+.+
T Consensus 95 ~~~~-~~~l~~~~~~~~~ 111 (219)
T cd06913 95 DVMM-PQRIRLQYEAALQ 111 (219)
T ss_pred ccCC-hhHHHHHHHHHHh
Confidence 9987 8999988777764
No 53
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.99 E-value=7.1e-09 Score=98.85 Aligned_cols=143 Identities=16% Similarity=0.078 Sum_probs=97.1
Q ss_pred ccccccceEEEEecCCCchh--hHHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCC
Q 009677 17 NSQNHSTIIEIIQETFGESE--TIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYC 94 (529)
Q Consensus 17 ~~~~h~~~i~v~~~~~~~~~--~~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~ 94 (529)
.+|++|..--|++|++++++ +.++......| +.+++-+++ .+++.++|.+++.+- -.++|+++++|+|.++
T Consensus 20 ~~q~~~~~eiiivD~~s~d~t~~~~~~~~~~~~-i~~~~~~~n-----~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~ 92 (202)
T cd04185 20 LAQTRPPDHIIVIDNASTDGTAEWLTSLGDLDN-IVYLRLPEN-----LGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIP 92 (202)
T ss_pred HhccCCCceEEEEECCCCcchHHHHHHhcCCCc-eEEEECccc-----cchhhHHHHHHHHHh-ccCCCEEEEeCCCCCc
Confidence 34444432113445544432 24444444444 677776554 578889999888632 2579999999999999
Q ss_pred CCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHHHHHHHhhccCCcccccccceEeccccccCCc
Q 009677 95 NDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFT 174 (529)
Q Consensus 95 ~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL~g~p~ 174 (529)
+ |+++++.+..+.+ ++++.+. |..+.. +. +++|.++||+++
T Consensus 93 ~-~~~l~~l~~~~~~----~~~~~~~-~~~~~~----~~------------------------~~~~~~~~~~~~----- 133 (202)
T cd04185 93 D-PDALEKLLAYADK----DNPQFLA-PLVLDP----DG------------------------SFVGVLISRRVV----- 133 (202)
T ss_pred C-hHHHHHHHHHHhc----CCceEec-ceeEcC----CC------------------------ceEEEEEeHHHH-----
Confidence 8 9999999988763 5677664 444331 10 456789999988
Q ss_pred hhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCC--CCccchHHHHHHHHh
Q 009677 175 HTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILY--QSVSEDLFTGFILHC 251 (529)
Q Consensus 175 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~--~svtED~~t~~~l~~ 251 (529)
+++| +.. ....||.+.+.++..
T Consensus 134 -------------------------------------------------------~~~g~~~~~~~~~~eD~~~~~r~~~ 158 (202)
T cd04185 134 -------------------------------------------------------EKIGLPDKEFFIWGDDTEYTLRASK 158 (202)
T ss_pred -------------------------------------------------------HHhCCCChhhhccchHHHHHHHHHH
Confidence 4565 332 234699999999999
Q ss_pred CCCeEEEeCC
Q 009677 252 KGWTSTYLTP 261 (529)
Q Consensus 252 ~Gwrs~y~~~ 261 (529)
+|++. |+++
T Consensus 159 ~G~~i-~~~~ 167 (202)
T cd04185 159 AGPGI-YVPD 167 (202)
T ss_pred cCCcE-Eecc
Confidence 99999 9986
No 54
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=98.98 E-value=4.1e-09 Score=115.20 Aligned_cols=167 Identities=17% Similarity=0.195 Sum_probs=106.2
Q ss_pred CCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHH--HHHHHH-HHHHHHHhhccCCcc-
Q 009677 81 NSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYD--GRFRSA-YCVQWQGMDGLKGPV- 156 (529)
Q Consensus 81 ~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~--~~~~~f-~~~~~~g~d~~~~~~- 156 (529)
..|||+.+|||..+. |+.+.+.+.-+.+ ||+++-|..--+-.|.. ..+.. +..+.+ -+..+++....-|.+
T Consensus 201 ~~~~il~~DaDt~~~-p~~~~~lv~~m~~---d~~i~gvCG~t~i~n~~-~s~~t~~Q~fEY~ish~l~Ka~Es~fG~Vt 275 (527)
T PF03142_consen 201 FYEYILMVDADTKFD-PDSVNRLVDAMER---DPKIGGVCGETRIDNKG-QSWWTMYQVFEYAISHHLQKAFESVFGSVT 275 (527)
T ss_pred ceEEEEEecCCceEc-HHHHHHHHHHHcC---CCCeEEEeceeEEcCCC-CCHhhheeccchhHHHHHHHHHHHHhCcee
Confidence 469999999999997 9999999988763 78898888755555542 22221 111111 133445555444443
Q ss_pred c-ccccceEecccccc-CCchhhhhhccCCchhhH-hhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc
Q 009677 157 L-SGTGYYIKRESLYA-DFTHTELKDTFGKSNVLI-NSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG 233 (529)
Q Consensus 157 ~-~Gtg~v~RR~aL~g-~p~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG 233 (529)
| -|.-+++|-+|+.+ +...+ +-|+ ..+...+..+. . +...
T Consensus 276 CLPGcfsmyR~~a~~~~~~~~~---------p~l~~~~i~~~Y~~~~-------~---------------------dtlh 318 (527)
T PF03142_consen 276 CLPGCFSMYRISALMDGDGYWV---------PLLISPDIIEKYSENP-------V---------------------DTLH 318 (527)
T ss_pred ecCCcceeeeeehhcccccccc---------ccccchHHHHHHhhcc-------c---------------------hHHH
Confidence 3 59999999999853 11000 0000 00001110000 0 0011
Q ss_pred -cCCCCccchHHHHHHHHhC--CCeEEEeCCCCCceecccCCCHHHHHhhhhhhccccccc
Q 009677 234 -ILYQSVSEDLFTGFILHCK--GWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDV 291 (529)
Q Consensus 234 -~~~~svtED~~t~~~l~~~--Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv 291 (529)
-.-..+.||=.++-.|.++ |||..|++. +.+...+|+++..+++||+||..|++--
T Consensus 319 ~~nl~~lGEDR~LttLlLk~~~~~k~~y~~~--A~a~T~aP~t~~vflsQRRRWinSTi~N 377 (527)
T PF03142_consen 319 QKNLLDLGEDRWLTTLLLKQFPGYKTEYVPS--AVAYTDAPETFSVFLSQRRRWINSTIHN 377 (527)
T ss_pred HHhhhhcchhHHHHHHHHhhCCCceEEEccc--ccccccCCccHHHHHHHhhhccchhHhh
Confidence 1112568999988777776 899999997 7899999999999999999999999844
No 55
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=98.93 E-value=2.5e-08 Score=96.12 Aligned_cols=62 Identities=18% Similarity=0.096 Sum_probs=50.2
Q ss_pred HHHhhhccCCcE-EEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcC
Q 009677 38 IRQADLVEMPLL-VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 109 (529)
Q Consensus 38 ~~~~~~~~~p~l-~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d 109 (529)
++.......|.. .++..+++ .+|++|+|.|++. ++||+|+.+|+|...+ |+.+.+.+..+.+
T Consensus 47 ~~~~~~~~~~~~i~~i~~~~n-----~G~~~a~~~g~~~----a~gd~i~~ld~D~~~~-~~~l~~l~~~~~~ 109 (211)
T cd04188 47 VARKLARKNPALIRVLTLPKN-----RGKGGAVRAGMLA----ARGDYILFADADLATP-FEELEKLEEALKT 109 (211)
T ss_pred HHHHHHHhCCCcEEEEEcccC-----CCcHHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhc
Confidence 445555566764 66666554 5799999999999 8999999999999998 9999999988664
No 56
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=98.92 E-value=2.4e-09 Score=96.81 Aligned_cols=138 Identities=21% Similarity=0.214 Sum_probs=80.3
Q ss_pred cccccceEEEEecCCCchhh--HHHhhhccC-CcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCC
Q 009677 18 SQNHSTIIEIIQETFGESET--IRQADLVEM-PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYC 94 (529)
Q Consensus 18 ~~~h~~~i~v~~~~~~~~~~--~~~~~~~~~-p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~ 94 (529)
+|.++..--+++++++++++ ......... +.+.++..+++ .+|+.|+|.+++. +++|+|+++|+|..+
T Consensus 21 ~q~~~~~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~n~~~~~----~~~~~i~~~D~D~~~ 91 (180)
T cd06423 21 ALDYPKLEVIVVDDGSTDDTLEILEELAALYIRRVLVVRDKEN-----GGKAGALNAGLRH----AKGDIVVVLDADTIL 91 (180)
T ss_pred hCCCCceEEEEEeCCCccchHHHHHHHhccccceEEEEEeccc-----CCchHHHHHHHHh----cCCCEEEEECCCCCc
Confidence 34433332244455444433 233323332 44666665554 6899999999999 899999999999999
Q ss_pred CCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHH----HHHHHHhhccCC-cccccccceEecccc
Q 009677 95 NDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAY----CVQWQGMDGLKG-PVLSGTGYYIKRESL 169 (529)
Q Consensus 95 ~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~----~~~~~g~d~~~~-~~~~Gtg~v~RR~aL 169 (529)
. |++|.+.+..+.. +++++.|.......+.+. ..+.......+ .....+...... ..+.|++.++||+++
T Consensus 92 ~-~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 166 (180)
T cd06423 92 E-PDALKRLVVPFFA---DPKVGAVQGRVRVRNGSE-NLLTRLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREAL 166 (180)
T ss_pred C-hHHHHHHHHHhcc---CCCeeeEeeeEEEecCcC-cceeccchheecceeeeeeehhheecceeecCchHHHHHHHHH
Confidence 8 9999998565553 577877766554443321 11111111100 011111111122 345789999999998
No 57
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=98.82 E-value=5.6e-08 Score=99.03 Aligned_cols=167 Identities=16% Similarity=0.174 Sum_probs=100.5
Q ss_pred EEecCCCchh--hHHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHH
Q 009677 27 IIQETFGESE--TIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM 104 (529)
Q Consensus 27 v~~~~~~~~~--~~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l 104 (529)
|++|+++++. ..+.....+.....|+.-+.. +. .-.+|.|.|.|++. +++|+|+++|+|.+++ |+++.+++
T Consensus 38 Ivvd~~s~~~~~~~l~~~~~~~~~~~~i~~~~~-~~-~f~~a~arN~g~~~----A~~d~l~flD~D~i~~-~~~i~~~~ 110 (281)
T PF10111_consen 38 IVVDDGSSDEFDEELKKLCEKNGFIRYIRHEDN-GE-PFSRAKARNIGAKY----ARGDYLIFLDADCIPS-PDFIEKLL 110 (281)
T ss_pred EEEECCCchhHHHHHHHHHhccCceEEEEcCCC-CC-CcCHHHHHHHHHHH----cCCCEEEEEcCCeeeC-HHHHHHHH
Confidence 4445555433 122233334445557765432 11 24899999999999 9999999999999998 99999999
Q ss_pred hhhcCCCCCCceEEEccCceeccCCCcchHHHHH-----HHHHHHHHHH-hhccCCcccccccceEeccccccCCchhhh
Q 009677 105 CFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRF-----RSAYCVQWQG-MDGLKGPVLSGTGYYIKRESLYADFTHTEL 178 (529)
Q Consensus 105 ~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~-----~~f~~~~~~g-~d~~~~~~~~Gtg~v~RR~aL~g~p~~~~~ 178 (529)
.+..+-. ...-+++-.|..+.+.+....+.... ..+.+....+ .+.+.....+|++.++||+..
T Consensus 111 ~~~~~l~-~~~~~~~~~p~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f--------- 180 (281)
T PF10111_consen 111 NHVKKLD-KNPNAFLVYPCLYLSEEGSEKFYSQFKNLWDHEFLESFISGKNSLWEFIAFASSCFLINREDF--------- 180 (281)
T ss_pred HHHHHHh-cCCCceEEEeeeeccchhhHHHhhcchhcchHHHHHHHhhccccccccccccceEEEEEHHHH---------
Confidence 8321100 12233445566666543322222111 0111111111 223333344678888898887
Q ss_pred hhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCCC---ccchHHHHHHHHhCCC
Q 009677 179 KDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQS---VSEDLFTGFILHCKGW 254 (529)
Q Consensus 179 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~s---vtED~~t~~~l~~~Gw 254 (529)
.++| |++.- =-||.+.+.||...|.
T Consensus 181 ---------------------------------------------------~~iGGfDE~f~G~G~ED~D~~~RL~~~~~ 209 (281)
T PF10111_consen 181 ---------------------------------------------------LEIGGFDERFRGWGYEDIDFGYRLKKAGY 209 (281)
T ss_pred ---------------------------------------------------HHhCCCCccccCCCcchHHHHHHHHHcCC
Confidence 4565 65542 2699999999999999
Q ss_pred eEEEeCC
Q 009677 255 TSTYLTP 261 (529)
Q Consensus 255 rs~y~~~ 261 (529)
+..++++
T Consensus 210 ~~~~~~~ 216 (281)
T PF10111_consen 210 KFKRSPD 216 (281)
T ss_pred cEecChH
Confidence 9877764
No 58
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=98.72 E-value=6.5e-09 Score=93.94 Aligned_cols=131 Identities=14% Similarity=0.028 Sum_probs=82.7
Q ss_pred EEecCCCch--hhHHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHH
Q 009677 27 IIQETFGES--ETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM 104 (529)
Q Consensus 27 v~~~~~~~~--~~~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l 104 (529)
++++|++++ .+++.......+++.|++++++ .++++|+|.|++. +.+|||+.+|+|.++. |++|.+.+
T Consensus 31 ivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n-----~g~~~~~n~~~~~----a~~~~i~~ld~D~~~~-~~~l~~l~ 100 (169)
T PF00535_consen 31 IVVDDGSTDETEEILEEYAESDPNIRYIRNPEN-----LGFSAARNRGIKH----AKGEYILFLDDDDIIS-PDWLEELV 100 (169)
T ss_dssp EEEECS-SSSHHHHHHHHHCCSTTEEEEEHCCC-----SHHHHHHHHHHHH------SSEEEEEETTEEE--TTHHHHHH
T ss_pred EEecccccccccccccccccccccccccccccc-----ccccccccccccc----cceeEEEEeCCCceEc-HHHHHHHH
Confidence 344444433 2344444445789999999876 5899999999999 9999999999999998 89999999
Q ss_pred hhhcCCCCCCceEEEccCceeccCCCcchHHH--HHHHHHHHHHHHhhccCCcccccccceEecccc
Q 009677 105 CFHLDPKISSSLAFVQFPQKFHNINKYDIYDG--RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESL 169 (529)
Q Consensus 105 ~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~--~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL 169 (529)
..+.+. ++++.+...+....+......... .....+..............++|+++++||+++
T Consensus 101 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~ 165 (169)
T PF00535_consen 101 EALEKN--PPDVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVF 165 (169)
T ss_dssp HHHHHC--TTEEEEEEEEEEECTTETEECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHH
T ss_pred HHHHhC--CCcEEEEEEEEecCCccccccccchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHH
Confidence 999862 233443333322222211111000 001222333444556667788999999999998
No 59
>PRK10073 putative glycosyl transferase; Provisional
Probab=98.71 E-value=5.1e-08 Score=101.65 Aligned_cols=90 Identities=19% Similarity=0.101 Sum_probs=65.5
Q ss_pred CccccccceEEEEecCCCch--hhHHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCC
Q 009677 16 GNSQNHSTIIEIIQETFGES--ETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY 93 (529)
Q Consensus 16 ~~~~~h~~~i~v~~~~~~~~--~~~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~ 93 (529)
+..|++++.--|++||++++ .++.+....+.|++.+++.+ +.+.++|.|.|++. ++||||+.+|+|..
T Consensus 28 l~~Qt~~~~EIIiVdDgStD~t~~i~~~~~~~~~~i~vi~~~------n~G~~~arN~gl~~----a~g~yi~flD~DD~ 97 (328)
T PRK10073 28 LIAQTWTALEIIIVNDGSTDNSVEIAKHYAENYPHVRLLHQA------NAGVSVARNTGLAV----ATGKYVAFPDADDV 97 (328)
T ss_pred HHhCCCCCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEECC------CCChHHHHHHHHHh----CCCCEEEEECCCCc
Confidence 45666665433444444443 23566666778999988642 26899999999999 99999999999999
Q ss_pred CCCchHHHHHHhhhcCCCCCCceEE
Q 009677 94 CNDPTSARQAMCFHLDPKISSSLAF 118 (529)
Q Consensus 94 ~~~p~~l~~~l~~f~d~~~~~~va~ 118 (529)
+. |+.+.+.+..+.+. +.+++.
T Consensus 98 ~~-p~~l~~l~~~~~~~--~~dvv~ 119 (328)
T PRK10073 98 VY-PTMYETLMTMALED--DLDVAQ 119 (328)
T ss_pred cC-hhHHHHHHHHHHhC--CCCEEE
Confidence 98 99999988877542 345543
No 60
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=98.70 E-value=7.3e-08 Score=90.02 Aligned_cols=118 Identities=11% Similarity=0.044 Sum_probs=76.3
Q ss_pred HHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceE
Q 009677 38 IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLA 117 (529)
Q Consensus 38 ~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va 117 (529)
+.+....+.|.+.++..+++ .+|++|+|.+++. +.||+++++|+|..+. |+.|.+.+..+.+ ++.+
T Consensus 45 ~~~~~~~~~~~~~~~~~~~n-----~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~----~~~~ 110 (185)
T cd04179 45 IARELAARVPRVRVIRLSRN-----FGKGAAVRAGFKA----ARGDIVVTMDADLQHP-PEDIPKLLEKLLE----GGAD 110 (185)
T ss_pred HHHHHHHhCCCeEEEEccCC-----CCccHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhc----cCCc
Confidence 45555667788888877665 5799999999999 8999999999999997 9999999988654 3455
Q ss_pred EEccCceeccCCCcch-HHHHHHHHHHHHHHHhhccCCcccccccceEecccc
Q 009677 118 FVQFPQKFHNINKYDI-YDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESL 169 (529)
Q Consensus 118 ~VQ~pq~f~n~~~~d~-~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL 169 (529)
+|+.+....+.....+ +.+.....+................|...++||+++
T Consensus 111 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 163 (185)
T cd04179 111 VVIGSRFVRGGGAGMPLLRRLGSRLFNFLIRLLLGVRISDTQSGFRLFRREVL 163 (185)
T ss_pred EEEEEeecCCCcccchHHHHHHHHHHHHHHHHHcCCCCcCCCCceeeeHHHHH
Confidence 6666655443211111 111111111111122222223334566668999998
No 61
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=98.66 E-value=1.6e-07 Score=106.63 Aligned_cols=161 Identities=16% Similarity=0.180 Sum_probs=106.5
Q ss_pred HHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchH---HHHHHH-HHH
Q 009677 68 ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIY---DGRFRS-AYC 143 (529)
Q Consensus 68 aLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~---~~~~~~-f~~ 143 (529)
.+|.+... ++..=+||+.+|+|..+. |+++.+++.-|- .||+||-+.. | -.|. .|-+ .++.+. .-.
T Consensus 429 ~~y~~~~~--L~~~v~~il~vD~dT~~~-P~ai~~lv~~f~---~dp~VggaCG-~-I~~~--~~~w~v~~Q~FEY~Ish 498 (862)
T KOG2571|consen 429 VMYTAFKA--LMPSVDYILVVDADTRLD-PDALYHLVKVFD---EDPQVGGACG-R-ILNK--GGSWVVAYQNFEYAISH 498 (862)
T ss_pred HHHHHHHH--hcCcceEEEEecCCCccC-cHHHHHHHHHhc---cCcccceecc-c-cccC--CCceEEeHHHHHHHHHH
Confidence 34444444 335667999999999997 999999998886 3688887766 2 2222 2211 122222 122
Q ss_pred HHHHHhhccCCcccc--cccceEeccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccc
Q 009677 144 VQWQGMDGLKGPVLS--GTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCS 221 (529)
Q Consensus 144 ~~~~g~d~~~~~~~~--Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ 221 (529)
..++.-+..-|-+.| |.=+.+|-+||.++.. +..+|...
T Consensus 499 ~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~~----~~~y~~~~----------------------------------- 539 (862)
T KOG2571|consen 499 NLQKATESVFGCVSCLPGCFSLYRASALMDQFV----EYFYGEKF----------------------------------- 539 (862)
T ss_pred HHHHhhhhhceeEEecCchhHHHHHHHHhcchH----Hhhhchhh-----------------------------------
Confidence 344555655565544 5555688888853211 11111100
Q ss_pred cccccccccccc-cCCCCccchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhccc
Q 009677 222 YEHQTKWGEEVG-ILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 287 (529)
Q Consensus 222 ye~~t~wg~~iG-~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 287 (529)
++-+ ..-.+..||-.+..++..+||+..|+.. +.+...+|+++.+++.||+||..|
T Consensus 540 --------~~~~~~~~~~~geDR~L~~~llskgy~l~Y~a~--s~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 540 --------SGPRHGIQYSLGEDRWLCTLLLSKGYRLKYVAA--SDAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred --------cCcccccccccchhHHHHHHHHhccceeeeecc--ccccccCcHhHHHHHHHhhhhccc
Confidence 1111 2223589999999999999999999986 788999999999999999999999
No 62
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=98.63 E-value=3.8e-07 Score=85.50 Aligned_cols=114 Identities=11% Similarity=0.091 Sum_probs=73.6
Q ss_pred HHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceE
Q 009677 38 IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLA 117 (529)
Q Consensus 38 ~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va 117 (529)
+......+.|++.++..+++ .+|++|+|.+++. +.+|+|+.+|+|..+. |+.|.+.+..+.+ +.++.
T Consensus 46 ~~~~~~~~~~~i~~i~~~~n-----~G~~~a~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~~~---~~~~v 112 (181)
T cd04187 46 ILRELAARDPRVKVIRLSRN-----FGQQAALLAGLDH----ARGDAVITMDADLQDP-PELIPEMLAKWEE---GYDVV 112 (181)
T ss_pred HHHHHHhhCCCEEEEEecCC-----CCcHHHHHHHHHh----cCCCEEEEEeCCCCCC-HHHHHHHHHHHhC---CCcEE
Confidence 45555667788998887654 6899999999999 8999999999999997 9999999987432 34443
Q ss_pred EEccCceeccCCCcchHHHHHHHHHHHHHHHhhccCCcccccccceEecccc
Q 009677 118 FVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESL 169 (529)
Q Consensus 118 ~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL 169 (529)
+.. ....+ ...........+........+..-+...|+..++||+++
T Consensus 113 ~g~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 159 (181)
T cd04187 113 YGV--RKNRK---ESWLKRLTSKLFYRLINKLSGVDIPDNGGDFRLMDRKVV 159 (181)
T ss_pred EEE--ecCCc---chHHHHHHHHHHHHHHHHHcCCCCCCCCCCEEEEcHHHH
Confidence 322 11111 112221111112222222233344456788889999998
No 63
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=98.61 E-value=4.8e-07 Score=93.13 Aligned_cols=172 Identities=16% Similarity=0.139 Sum_probs=109.9
Q ss_pred ccccccceEEEEecCCCchhhHHHhhhcc-CCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCC-EEEEeCCCCCC
Q 009677 17 NSQNHSTIIEIIQETFGESETIRQADLVE-MPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSP-YILGLDCDMYC 94 (529)
Q Consensus 17 ~~~~h~~~i~v~~~~~~~~~~~~~~~~~~-~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~-~i~ilDaD~~~ 94 (529)
..++.+...-|++||++.+++. +..... .|++.++.-.+| .+=||+.|.+.+... .+++ |++.++-|.++
T Consensus 26 ~~~~~~~~~iv~vDn~s~d~~~-~~~~~~~~~~v~~i~~~~N-----lG~agg~n~g~~~a~--~~~~~~~l~LN~D~~~ 97 (305)
T COG1216 26 AAQTYPDDVIVVVDNGSTDGSL-EALKARFFPNVRLIENGEN-----LGFAGGFNRGIKYAL--AKGDDYVLLLNPDTVV 97 (305)
T ss_pred hcCCCCCcEEEEccCCCCCCCH-HHHHhhcCCcEEEEEcCCC-----ccchhhhhHHHHHHh--cCCCcEEEEEcCCeee
Confidence 4455555554556766655332 222333 799999987766 567899999999832 3443 99999999888
Q ss_pred CCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCc-chHHHHHHHHHHHHHH-----------HhhccCCcccccccc
Q 009677 95 NDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKY-DIYDGRFRSAYCVQWQ-----------GMDGLKGPVLSGTGY 162 (529)
Q Consensus 95 ~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~-d~~~~~~~~f~~~~~~-----------g~d~~~~~~~~Gtg~ 162 (529)
+ |++|.+.+..+.+ ++..+.|+.....++.... +..+.....+...... ..+... +.++|.++
T Consensus 98 ~-~~~l~~ll~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~ 172 (305)
T COG1216 98 E-PDLLEELLKAAEE---DPAAGVVGPLIRNYDESLYIDRRGGESDGLTGGWRASPLLEIAPDLSSYLEVV-ASLSGACL 172 (305)
T ss_pred C-hhHHHHHHHHHHh---CCCCeEeeeeEecCCCCcchheeccccccccccceecccccccccccchhhhh-hhcceeee
Confidence 7 9999999998874 6778887765544332110 0000000000000000 000000 03688889
Q ss_pred eEeccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCC--Cc
Q 009677 163 YIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQ--SV 239 (529)
Q Consensus 163 v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~--sv 239 (529)
++||+++ ++|| ++.+ .-
T Consensus 173 li~~~~~------------------------------------------------------------~~vG~~de~~F~y 192 (305)
T COG1216 173 LIRREAF------------------------------------------------------------EKVGGFDERFFIY 192 (305)
T ss_pred EEcHHHH------------------------------------------------------------HHhCCCCccccee
Confidence 9999998 5777 5543 55
Q ss_pred cchHHHHHHHHhCCCeEEEeCC
Q 009677 240 SEDLFTGFILHCKGWTSTYLTP 261 (529)
Q Consensus 240 tED~~t~~~l~~~Gwrs~y~~~ 261 (529)
.||++.++|+...||++.|++.
T Consensus 193 ~eD~D~~~R~~~~G~~i~~~p~ 214 (305)
T COG1216 193 YEDVDLCLRARKAGYKIYYVPD 214 (305)
T ss_pred ehHHHHHHHHHHcCCeEEEeec
Confidence 8999999999999999999986
No 64
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=98.53 E-value=1.1e-06 Score=77.38 Aligned_cols=63 Identities=27% Similarity=0.234 Sum_probs=49.0
Q ss_pred CcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccC
Q 009677 47 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFP 122 (529)
Q Consensus 47 p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~p 122 (529)
+...++.+++ +.+|++++|.+++. .++|+++++|+|.++. |+++.+.+..+.. +++.++|+++
T Consensus 52 ~~~~~~~~~~-----~~g~~~~~~~~~~~----~~~d~v~~~d~D~~~~-~~~~~~~~~~~~~---~~~~~~v~~~ 114 (156)
T cd00761 52 PRVIRVINEE-----NQGLAAARNAGLKA----ARGEYILFLDADDLLL-PDWLERLVAELLA---DPEADAVGGP 114 (156)
T ss_pred CCeEEEEecC-----CCChHHHHHHHHHH----hcCCEEEEECCCCccC-ccHHHHHHHHHhc---CCCceEEecc
Confidence 4456665544 36999999999999 7899999999999997 8999887544442 4677777765
No 65
>PRK10018 putative glycosyl transferase; Provisional
Probab=98.49 E-value=2.8e-06 Score=86.80 Aligned_cols=83 Identities=18% Similarity=0.154 Sum_probs=60.8
Q ss_pred CccccccceEEEEecCCCchhhHHHhhhc--cCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCC
Q 009677 16 GNSQNHSTIIEIIQETFGESETIRQADLV--EMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY 93 (529)
Q Consensus 16 ~~~~~h~~~i~v~~~~~~~~~~~~~~~~~--~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~ 93 (529)
+..|++++.--|++|+++++.++..+... ..|++.|+..+++ .+++.|+|.|++. ++||||+.+|+|.+
T Consensus 27 vl~Qt~~~~EiIVVDDgS~~~~~~~~~~~~~~~~ri~~i~~~~n-----~G~~~a~N~gi~~----a~g~~I~~lDaDD~ 97 (279)
T PRK10018 27 VLRQDYSNWEMIIVDDCSTSWEQLQQYVTALNDPRITYIHNDIN-----SGACAVRNQAIML----AQGEYITGIDDDDE 97 (279)
T ss_pred HHhCCCCCeEEEEEECCCCCHHHHHHHHHHcCCCCEEEEECCCC-----CCHHHHHHHHHHH----cCCCEEEEECCCCC
Confidence 34677876433444544433233333322 4578999987654 7899999999999 99999999999999
Q ss_pred CCCchHHHHHHhhhc
Q 009677 94 CNDPTSARQAMCFHL 108 (529)
Q Consensus 94 ~~~p~~l~~~l~~f~ 108 (529)
.. |+.|.+.+.++.
T Consensus 98 ~~-p~~l~~~~~~~~ 111 (279)
T PRK10018 98 WT-PNRLSVFLAHKQ 111 (279)
T ss_pred CC-ccHHHHHHHHHH
Confidence 98 999998887764
No 66
>PRK10063 putative glycosyl transferase; Provisional
Probab=98.45 E-value=2.5e-06 Score=85.42 Aligned_cols=64 Identities=16% Similarity=0.029 Sum_probs=43.9
Q ss_pred EEecCCCchhh--HHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHH
Q 009677 27 IIQETFGESET--IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQ 102 (529)
Q Consensus 27 v~~~~~~~~~~--~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~ 102 (529)
|++|+++++++ ++.....+ +++.+++. ++ +++++|+|.|++. +.||||+.+|+|.... |+.++.
T Consensus 37 IVvDdgStD~t~~i~~~~~~~-~~i~~i~~-~~-----~G~~~A~N~Gi~~----a~g~~v~~ld~DD~~~-~~~~~~ 102 (248)
T PRK10063 37 IVVDGGSNDGTREFLENLNGI-FNLRFVSE-PD-----NGIYDAMNKGIAM----AQGRFALFLNSGDIFH-QDAANF 102 (248)
T ss_pred EEEECcCcccHHHHHHHhccc-CCEEEEEC-CC-----CCHHHHHHHHHHH----cCCCEEEEEeCCcccC-cCHHHH
Confidence 44455444433 33333222 35777753 22 5899999999999 8999999999999987 887544
No 67
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=98.05 E-value=0.00031 Score=73.30 Aligned_cols=53 Identities=13% Similarity=0.077 Sum_probs=44.6
Q ss_pred CCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhc
Q 009677 46 MPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 108 (529)
Q Consensus 46 ~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~ 108 (529)
-++++.+..+++ .+|++|+|+|++. ++||+++.+|||...+ |+.+.+.+..+.
T Consensus 64 ~~~v~~i~~~~n-----~G~~~A~~~G~~~----A~gd~vv~~DaD~q~~-p~~i~~l~~~~~ 116 (325)
T PRK10714 64 DSHIVAILLNRN-----YGQHSAIMAGFSH----VTGDLIITLDADLQNP-PEEIPRLVAKAD 116 (325)
T ss_pred CCcEEEEEeCCC-----CCHHHHHHHHHHh----CCCCEEEEECCCCCCC-HHHHHHHHHHHH
Confidence 356666655443 6899999999999 8999999999999987 999999998875
No 68
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=98.02 E-value=0.00014 Score=76.15 Aligned_cols=64 Identities=20% Similarity=0.127 Sum_probs=49.3
Q ss_pred CcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEcc
Q 009677 47 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQF 121 (529)
Q Consensus 47 p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~ 121 (529)
+++.++..++| .+|++|+|.|++. +.||+|+++|||...+ |+.+.+.+..+.+-. ++..++|..
T Consensus 137 ~~i~vi~~~~N-----~G~~~A~~~Gi~~----a~gd~I~~~DaD~~~~-~~~l~~l~~~l~~~~-~~~~dvV~G 200 (333)
T PTZ00260 137 IDIRLLSLLRN-----KGKGGAVRIGMLA----SRGKYILMVDADGATD-IDDFDKLEDIMLKIE-QNGLGIVFG 200 (333)
T ss_pred CcEEEEEcCCC-----CChHHHHHHHHHH----ccCCEEEEEeCCCCCC-HHHHHHHHHHHHHhh-ccCCceEEe
Confidence 45888876554 6899999999999 8999999999999987 999888887765311 234555554
No 69
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=97.95 E-value=8.5e-06 Score=84.31 Aligned_cols=196 Identities=19% Similarity=0.228 Sum_probs=130.0
Q ss_pred CccccccceEEEEecCCCchhh-HHHhhhccCCcE---EEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCC
Q 009677 16 GNSQNHSTIIEIIQETFGESET-IRQADLVEMPLL---VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCD 91 (529)
Q Consensus 16 ~~~~~h~~~i~v~~~~~~~~~~-~~~~~~~~~p~l---~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD 91 (529)
++.+.|+-.+--.+++.+|.+. +....-+.+|++ ..+.-|+-- -+-|-.|+=-|.+. ...|+|++.|.|
T Consensus 108 fts~Y~~~ElLfcv~s~eDpAi~vv~~Ll~kyp~VdAklf~gG~~vg---~npKInN~mpgy~~----a~ydlvlisDsg 180 (431)
T KOG2547|consen 108 FTSQYHKYELLFCVESSEDPAIEVVERLLKKYPNVDAKLFFGGEKVG---LNPKINNMMPGYRA----AKYDLVLISDSG 180 (431)
T ss_pred HhhccCceEEEEEEccCCCcHHHHHHHHHhhCCCcceEEEEcccccc---cChhhhccCHHHHH----hcCCEEEEecCC
Confidence 4667776555445566665531 344456678864 456655532 35688899999999 999999999999
Q ss_pred CCCCCchHHHHHHhhhcCCCCCCceEEE-ccCceeccCCCcchHHHHHHHHHHHHHHH----hhccCCcccccccceEec
Q 009677 92 MYCNDPTSARQAMCFHLDPKISSSLAFV-QFPQKFHNINKYDIYDGRFRSAYCVQWQG----MDGLKGPVLSGTGYYIKR 166 (529)
Q Consensus 92 ~~~~~p~~l~~~l~~f~d~~~~~~va~V-Q~pq~f~n~~~~d~~~~~~~~f~~~~~~g----~d~~~~~~~~Gtg~v~RR 166 (529)
-... ||.+.+...-++. ..++|+| |+|-.+. .+..|. .-+ .++|...++. .+-.+--+..|-.|+.|+
T Consensus 181 I~m~-pdtildm~t~M~s---hekmalvtq~py~~d-r~Gf~a-tle-~~~fgTsh~r~yl~~n~~~~~c~tgms~~mrK 253 (431)
T KOG2547|consen 181 IFMK-PDTILDMATTMMS---HEKMALVTQTPYCKD-RQGFDA-TLE-QVYFGTSHPRIYLSGNVLGFNCSTGMSSMMRK 253 (431)
T ss_pred eeec-CchHHHHHHhhhc---ccceeeecCCceeec-cccchh-hhh-heeeccCCceEEEccccccccccccHHHHHHH
Confidence 9997 9999988888774 5789988 7775543 221111 101 1333332221 122222233566778888
Q ss_pred cccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhcccccccccccccccccccc--CCCCccchHH
Q 009677 167 ESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGI--LYQSVSEDLF 244 (529)
Q Consensus 167 ~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG~--~~~svtED~~ 244 (529)
+||+ ++-|. -.+.+.||.-
T Consensus 254 ~~ld-----------------------------------------------------------~~ggi~~f~~yLaedyF 274 (431)
T KOG2547|consen 254 EALD-----------------------------------------------------------ECGGISAFGGYLAEDYF 274 (431)
T ss_pred HHHH-----------------------------------------------------------HhccHHHHHHHHHHHHH
Confidence 8873 12222 1246899999
Q ss_pred HHHHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhcc
Q 009677 245 TGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGS 286 (529)
Q Consensus 245 t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~ 286 (529)
.+=.+..+|||+.+... ++-...+-.+...+..|-.||..
T Consensus 275 aaksllSRG~ksaist~--palQnSas~~mssf~~Ri~rwvk 314 (431)
T KOG2547|consen 275 AAKSLLSRGWKSAISTH--PALQNSASVTMSSFLDRIIRWVK 314 (431)
T ss_pred HHHHHHhhhhhhhhccc--chhhhhhhhHHHHHHHHHHHhhh
Confidence 99999999999999975 55556666888999999999975
No 70
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=97.40 E-value=0.0014 Score=67.97 Aligned_cols=52 Identities=17% Similarity=0.146 Sum_probs=44.3
Q ss_pred CCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCC-CCCchHHHHHHhhhcCCCCCCceEEEcc
Q 009677 62 HHFKAGALNVLLRVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFHLDPKISSSLAFVQF 121 (529)
Q Consensus 62 ~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~-~~~p~~l~~~l~~f~d~~~~~~va~VQ~ 121 (529)
..+|++|+|.+++. ++||+|+.+|||.. ++ |+++.+.+..+.+ ++++++|.+
T Consensus 100 n~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~~-p~~l~~l~~~l~~---~~~~~~V~g 152 (306)
T PRK13915 100 RPGKGEALWRSLAA----TTGDIVVFVDADLINFD-PMFVPGLLGPLLT---DPGVHLVKA 152 (306)
T ss_pred CCCHHHHHHHHHHh----cCCCEEEEEeCccccCC-HHHHHHHHHHHHh---CCCceEEEE
Confidence 36899999999999 89999999999997 55 9999999998862 366777764
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=96.49 E-value=0.013 Score=57.59 Aligned_cols=52 Identities=17% Similarity=0.133 Sum_probs=43.1
Q ss_pred CcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcC
Q 009677 47 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 109 (529)
Q Consensus 47 p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d 109 (529)
+++.++.. + ..+++.+.|.|+.. +.+|+|+.+|||..+. |+.+.+....+.+
T Consensus 47 ~~~~v~~~-~-----~~g~~~~~n~~~~~----a~~d~vl~lDaD~~~~-~~~~~~l~~~~~~ 98 (229)
T cd02511 47 YGAKVYQR-W-----WDGFGAQRNFALEL----ATNDWVLSLDADERLT-PELADEILALLAT 98 (229)
T ss_pred cCCEEEEC-C-----CCChHHHHHHHHHh----CCCCEEEEEeCCcCcC-HHHHHHHHHHHhC
Confidence 34555554 2 36899999999999 8999999999999998 9999998888765
No 72
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=95.31 E-value=0.074 Score=47.62 Aligned_cols=76 Identities=18% Similarity=0.066 Sum_probs=49.7
Q ss_pred CccccccceEEEEecCCCchhh--HHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCC
Q 009677 16 GNSQNHSTIIEIIQETFGESET--IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY 93 (529)
Q Consensus 16 ~~~~~h~~~i~v~~~~~~~~~~--~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~ 93 (529)
+..|.+++..-|++|+++++++ ++.......+.+.+...++ ..+++.|+|.++.. +.+|+|+.+|+|.+
T Consensus 25 ~~~q~~~~~eiivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~----~~~~~~~~~d~d~~ 95 (291)
T COG0463 25 LLNQTYKDFEIIVVDDGSTDGTTEIAIEYGAKDVRVIRLINER-----NGGLGAARNAGLEY----ARGDYIVFLDADDQ 95 (291)
T ss_pred HHhhhhcceEEEEEeCCCCCChHHHHHHHhhhcceEEEeeccc-----CCChHHHHHhhHHh----ccCCEEEEEccCCC
Confidence 3556666622244455544432 3333333334555555444 37999999999999 88899999999999
Q ss_pred CCCchHHHH
Q 009677 94 CNDPTSARQ 102 (529)
Q Consensus 94 ~~~p~~l~~ 102 (529)
. |+.+.+
T Consensus 96 -~-~~~~~~ 102 (291)
T COG0463 96 -H-PPELIP 102 (291)
T ss_pred -C-CHHHHH
Confidence 8 555555
No 73
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=94.71 E-value=0.16 Score=48.73 Aligned_cols=80 Identities=16% Similarity=0.151 Sum_probs=57.5
Q ss_pred EEecCCCchhh--HHHhhh--ccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHH
Q 009677 27 IIQETFGESET--IRQADL--VEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQ 102 (529)
Q Consensus 27 v~~~~~~~~~~--~~~~~~--~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~ 102 (529)
|++||.+.+++ ..++.. .+.+++....|.+. -+=.-|.-+++.+ +.|+|+++.|||---+ |.++-+
T Consensus 39 IivDD~SpDGt~~~a~~L~k~yg~d~i~l~pR~~k-----lGLgtAy~hgl~~----a~g~fiviMDaDlsHh-Pk~ipe 108 (238)
T KOG2978|consen 39 IIVDDASPDGTQEVAKALQKIYGEDNILLKPRTKK-----LGLGTAYIHGLKH----ATGDFIVIMDADLSHH-PKFIPE 108 (238)
T ss_pred EEEeCCCCCccHHHHHHHHHHhCCCcEEEEeccCc-----ccchHHHHhhhhh----ccCCeEEEEeCccCCC-chhHHH
Confidence 44555554544 334444 56789999999875 4566788999999 9999999999998866 999888
Q ss_pred HHhhhcCCCCCCceEEEc
Q 009677 103 AMCFHLDPKISSSLAFVQ 120 (529)
Q Consensus 103 ~l~~f~d~~~~~~va~VQ 120 (529)
.+..-.+ .+.++|-
T Consensus 109 ~i~lq~~----~~~div~ 122 (238)
T KOG2978|consen 109 FIRLQKE----GNYDIVL 122 (238)
T ss_pred HHHHhhc----cCcceee
Confidence 7665443 4455554
No 74
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=94.53 E-value=1.9 Score=50.00 Aligned_cols=74 Identities=23% Similarity=0.261 Sum_probs=50.8
Q ss_pred CCccchHHHHHHHHhCCCeEEEeCCCCCceecccCC-CHHHHHhhhhhhccccccccccccCccccCCCCCCHHHHHHHH
Q 009677 237 QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTT-NLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYG 315 (529)
Q Consensus 237 ~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~-~l~~~~~Qr~RWa~G~~qv~~~~~~p~~~~~~~l~~~qrl~y~ 315 (529)
-.++||+..|+.-.+||-++.+|.- ...|-.-+ .+.+-..=-.+=+.|+-|-.+||.--.+. .+|.+.+-+.+.
T Consensus 408 lhLsEDIfaG~n~~lRGG~i~h~ey---~qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe~yrLg--~~ld~~R~LSfy 482 (817)
T PF02364_consen 408 LHLSEDIFAGMNATLRGGRIKHCEY---IQCGKGRDVGFNSILNFETKIASGMGEQMLSREYYRLG--TRLDFFRFLSFY 482 (817)
T ss_pred ccccHHHHHHHHHHhcCCceeehhh---hhcccccccCchhhhhhHhHhcCCccchhhhHHHHHhh--ccCCHHHHHHHH
Confidence 3789999999999999999999862 33333221 22333333455688999998988644443 688887777654
No 75
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=90.67 E-value=1.5 Score=46.09 Aligned_cols=46 Identities=15% Similarity=0.186 Sum_probs=39.1
Q ss_pred HHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHH---HHHHhhhcCCCCCCceEEEcc
Q 009677 68 ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSA---RQAMCFHLDPKISSSLAFVQF 121 (529)
Q Consensus 68 aLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l---~~~l~~f~d~~~~~~va~VQ~ 121 (529)
|+|.+... .++++++++|.|.++. |+|+ .+++..+.+ |+++..|-+
T Consensus 88 aln~vF~~----~~~~~vIILEDDl~~s-PdFf~yf~~~l~~y~~---D~~v~~ISa 136 (334)
T cd02514 88 ALTQTFNL----FGYSFVIILEDDLDIA-PDFFSYFQATLPLLEE---DPSLWCISA 136 (334)
T ss_pred HHHHHHHh----cCCCEEEEECCCCccC-HhHHHHHHHHHHHHhc---CCCEEEEEe
Confidence 88888887 7899999999999998 9965 788877764 789998864
No 76
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=86.28 E-value=2.7 Score=41.56 Aligned_cols=53 Identities=13% Similarity=-0.166 Sum_probs=36.8
Q ss_pred cchHHHHHHHHhCCCeEEEeCCCCC----------ceecccCCCHHHHHhhhhhhcccccccc
Q 009677 240 SEDLFTGFILHCKGWTSTYLTPFRP----------QFLGTSTTNLNDLLIQGTRWGSGLTDVG 292 (529)
Q Consensus 240 tED~~t~~~l~~~Gwrs~y~~~~~~----------~~~g~aP~~l~~~~~Qr~RWa~G~~qv~ 292 (529)
.||-+.+.||..+|.+....+.... .-....|.-+.....++.||+...+.-+
T Consensus 138 gEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~dGLnsl 200 (219)
T cd00899 138 GEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSDGLNSL 200 (219)
T ss_pred cchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHHHHHHHHhhCeEeccCCccce
Confidence 4999999999999988655443110 0123355566777888999998887654
No 77
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=83.77 E-value=1.6 Score=43.03 Aligned_cols=60 Identities=12% Similarity=0.182 Sum_probs=43.4
Q ss_pred cEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEE
Q 009677 48 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFV 119 (529)
Q Consensus 48 ~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~V 119 (529)
.+..+++++. ..-|-++|.|++. ++++|++.+.-|..+.+++++.+++..|.. +|++|.+
T Consensus 30 ~i~i~~~~~~-----~s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~---~~~~G~i 89 (217)
T PF13712_consen 30 LIEIDNVRNA-----KSMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEE---DPNIGMI 89 (217)
T ss_dssp EEEEE-SSS------S-TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH----TTEEEE
T ss_pred EEEEeccCCC-----cCHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhh---CCCccEE
Confidence 3444555432 4678899999999 999999999999999889999999999932 4777665
No 78
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=73.78 E-value=6.2 Score=32.96 Aligned_cols=48 Identities=15% Similarity=0.123 Sum_probs=29.5
Q ss_pred ccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 009677 44 VEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN 95 (529)
Q Consensus 44 ~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~ 95 (529)
.++|.+..+..... -.....+...+|+..+.. .++++++.+|||-+..
T Consensus 38 ~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~---~~~dWvl~~D~DEfl~ 85 (97)
T PF13704_consen 38 RALPGVGIIRWVDP-YRDERRQRAWRNALIERA---FDADWVLFLDADEFLV 85 (97)
T ss_pred HhCCCcEEEEeCCC-ccchHHHHHHHHHHHHhC---CCCCEEEEEeeeEEEe
Confidence 45577776665542 211123444555555441 5789999999998876
No 79
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=73.73 E-value=4.4 Score=42.27 Aligned_cols=45 Identities=27% Similarity=0.284 Sum_probs=31.5
Q ss_pred HHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEE
Q 009677 70 NVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFV 119 (529)
Q Consensus 70 N~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~V 119 (529)
|.|++. +..+||+++|+|++|. +++-++...+........+.++|
T Consensus 120 NvAr~~----a~T~~v~~~DvD~~ps-~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 120 NVARSG----ARTDYVFLLDVDFLPS-PGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred HHHHHh----cCcceEEEecceeeeC-cchHHHHHHHhhhhccCCceEEE
Confidence 444555 7899999999999998 78766655555433335677776
No 80
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=71.04 E-value=8.8 Score=39.42 Aligned_cols=55 Identities=20% Similarity=0.073 Sum_probs=40.8
Q ss_pred ccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCC--CCchHHHHHHhhh
Q 009677 44 VEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYC--NDPTSARQAMCFH 107 (529)
Q Consensus 44 ~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~--~~p~~l~~~l~~f 107 (529)
.+..++..+.-.+| .+|.||..-+.-+ +.|++++..|||--- .|=+.|.++|.-.
T Consensus 129 ~~~d~irV~~l~~n-----rgKGgAvR~g~l~----~rG~~ilfadAdGaTkf~d~ekLe~al~~~ 185 (323)
T KOG2977|consen 129 LGDDNIRVIKLKKN-----RGKGGAVRKGMLS----SRGQKILFADADGATKFADLEKLEKALNDK 185 (323)
T ss_pred cCcceEEEeehhcc-----CCCCcceehhhHh----ccCceEEEEcCCCCccCCCHHHHHHHHHhh
Confidence 34557777766555 6899999999998 999999999999642 2245577776533
No 81
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=69.17 E-value=26 Score=37.54 Aligned_cols=40 Identities=13% Similarity=0.006 Sum_probs=30.0
Q ss_pred cHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhc
Q 009677 65 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 108 (529)
Q Consensus 65 KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~ 108 (529)
-...+-+|++. -+.|+|++.|||+=.-+++.+++.+..+.
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~ 122 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALD 122 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhh
Confidence 45678888887 44599999999975444888888776554
No 82
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=64.66 E-value=5 Score=33.05 Aligned_cols=21 Identities=19% Similarity=-0.129 Sum_probs=15.1
Q ss_pred chHHHHHHHHhCCCeEEEeCC
Q 009677 241 EDLFTGFILHCKGWTSTYLTP 261 (529)
Q Consensus 241 ED~~t~~~l~~~Gwrs~y~~~ 261 (529)
||.+.+.|+..+|.+....+.
T Consensus 47 ED~Dl~~Rl~~~g~~~~~~~~ 67 (78)
T PF02709_consen 47 EDDDLYNRLWKAGLKIVRVPG 67 (78)
T ss_dssp HHHHHHHHHHHTT---B-SST
T ss_pred cHHHHHHHHHHcCCeEEecCC
Confidence 999999999999998766554
No 83
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=55.68 E-value=73 Score=30.53 Aligned_cols=55 Identities=18% Similarity=0.173 Sum_probs=38.9
Q ss_pred CcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCCchHHHHHHhhhcC
Q 009677 47 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 109 (529)
Q Consensus 47 p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~-~~~~p~~l~~~l~~f~d 109 (529)
.++.++.++. ..+.++++-+++.... .+.+.+++++||+ +.. ++.+.+++..+.+
T Consensus 62 ~~~~~~~~~~-----~~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~~-~~~i~~l~~~~~~ 117 (229)
T cd02540 62 PNVEFVLQEE-----QLGTGHAVKQALPALK--DFEGDVLVLYGDVPLIT-PETLQRLLEAHRE 117 (229)
T ss_pred CCcEEEECCC-----CCCCHHHHHHHHHhhc--cCCCeEEEEeCCccccC-HHHHHHHHHHHHh
Confidence 3566666533 2578999999998721 1268899999999 344 6888888877754
No 84
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=45.36 E-value=7.4e+02 Score=31.37 Aligned_cols=82 Identities=21% Similarity=0.228 Sum_probs=51.1
Q ss_pred CCccchHHHHHHHHhCCCeEEEeCC-----CCCceecccCCCHHHHHhhhhhhccccccccccccCccccCCCCCCHHHH
Q 009677 237 QSVSEDLFTGFILHCKGWTSTYLTP-----FRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQS 311 (529)
Q Consensus 237 ~svtED~~t~~~l~~~Gwrs~y~~~-----~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv~~~~~~p~~~~~~~l~~~qr 311 (529)
-.++||+..|+.-..||=++.+|.- .|. .|+...+.- -..=+.|+-|-.+||.--.+ | .++.+-.-
T Consensus 1172 inlsEDIfAG~n~tlRgG~itH~EYiQvGKGRD--vGlnqI~~F-----eaKia~G~GEQ~LSRd~YrL-G-~~ldffRm 1242 (1679)
T KOG0916|consen 1172 INLSEDIFAGFNATLRGGNITHHEYIQVGKGRD--VGLNQISNF-----EAKIANGNGEQTLSRDYYRL-G-TQLDFFRM 1242 (1679)
T ss_pred cccchHhhhhhhHHhhCCCcccceeeecccccc--cCcchhhhh-----hhhhcCCCcchhhhHHHHHh-c-ccccHHHH
Confidence 3689999999999999999888761 121 233222222 23447888888888864334 2 57887776
Q ss_pred HHH-HHHhHhhHHhHHHH
Q 009677 312 MCY-GELSFFPLLYCLPL 328 (529)
Q Consensus 312 l~y-~~~~~~~~l~~i~~ 328 (529)
|.+ .....+. ++++..
T Consensus 1243 LSfyftt~GF~-~n~m~i 1259 (1679)
T KOG0916|consen 1243 LSFYFTTVGFY-FNNMFI 1259 (1679)
T ss_pred HHHHhccccHH-HHhHHH
Confidence 644 3333333 666543
No 85
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=45.08 E-value=94 Score=33.14 Aligned_cols=59 Identities=27% Similarity=0.395 Sum_probs=36.6
Q ss_pred hhccCCcEEEEEccCCCCCCC-------CCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHH
Q 009677 42 DLVEMPLLVYVSREKRPEHLH-------HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQ 102 (529)
Q Consensus 42 ~~~~~p~l~yv~Rek~p~~~~-------~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~ 102 (529)
...-.+.++|+.=+..|.... .+.-.+|+..++..+ +.++|+|++-|.|.+|+ |+.|+.
T Consensus 133 f~~~~~KIiy~~l~~~~~~g~~~~w~~E~~qR~~l~~l~~~~~-~~~dDliivSDvDEIP~-p~~l~~ 198 (356)
T PF04724_consen 133 FAFFHDKIIYVTLDDPPEKGRKDPWDRENYQRNALNGLLRLAG-IQDDDLIIVSDVDEIPS-PETLKF 198 (356)
T ss_pred HHhhhcceEEEEecCcCCCCCCchhHHHHHHHHHHHHHhhhcC-CCCCCEEEEcCcccccC-HHHHHH
Confidence 344456888887655432111 112234544455444 37899999999999997 777653
No 86
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=43.93 E-value=1.7e+02 Score=30.21 Aligned_cols=88 Identities=18% Similarity=0.165 Sum_probs=49.0
Q ss_pred HHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCce-E
Q 009677 39 RQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSL-A 117 (529)
Q Consensus 39 ~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~v-a 117 (529)
+...-..+|++.|+.-.. |.. --.-+--=|+|...|-.-.+..+|+.+|+|.+.. .|-..+.+....-.....++ |
T Consensus 54 i~~~i~~~~~~~yl~~~s-~~~-F~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S-~dnF~k~l~~~~ikk~~tnI~a 130 (346)
T COG4092 54 IRSYIDPMPRVLYLDFGS-PEP-FASETICANNGADYSHEKCESNLVLFLDVDCFGS-SDNFAKMLSIATIKKMRTNIDA 130 (346)
T ss_pred HHHHhccccceEEEecCC-Ccc-ccchhhhhhccchhhhccccccEEEEEecccccc-HHHHHHHHHHHHHHHHHhccCc
Confidence 334566789999998543 211 1111333455555532225699999999999997 45555444322110112334 4
Q ss_pred EEccCceeccCC
Q 009677 118 FVQFPQKFHNIN 129 (529)
Q Consensus 118 ~VQ~pq~f~n~~ 129 (529)
+.--|..|-|-.
T Consensus 131 ~~vlPV~~LNk~ 142 (346)
T COG4092 131 PLVLPVYHLNKA 142 (346)
T ss_pred ceeeeeeecchh
Confidence 555677776653
No 87
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=40.30 E-value=1.7e+02 Score=27.01 Aligned_cols=55 Identities=13% Similarity=-0.051 Sum_probs=37.2
Q ss_pred cEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcC
Q 009677 48 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 109 (529)
Q Consensus 48 ~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d 109 (529)
++.++..++ + ..+-++++..+++. ..+.+.+++++||+-.-+|+.+++.+..+.+
T Consensus 63 ~v~~v~~~~-~---~~g~~~si~~~l~~---~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 117 (188)
T TIGR03310 63 NITLVHNPQ-Y---AEGQSSSIKLGLEL---PVQSDGYLFLLGDQPFVTPDIIQLLLEAFAL 117 (188)
T ss_pred CeEEEECcC-h---hcCHHHHHHHHhcC---CCCCCEEEEEeCCcCCCCHHHHHHHHHHHHh
Confidence 566665432 1 23556778888872 1567899999999943338899888876653
No 88
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=34.69 E-value=2e+02 Score=27.01 Aligned_cols=41 Identities=17% Similarity=0.148 Sum_probs=31.6
Q ss_pred CCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcC
Q 009677 63 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 109 (529)
Q Consensus 63 ~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d 109 (529)
.+-++++-.++.. -+.+.+++++||++.+ .+ +.+.+.++.+
T Consensus 81 ~g~~~al~~~~~~----~~~~~~lv~~~D~~~~-~~-~~~~~~~~~~ 121 (217)
T cd04181 81 LGTAGAVRNAEDF----LGDDDFLVVNGDVLTD-LD-LSELLRFHRE 121 (217)
T ss_pred CccHHHHHHhhhh----cCCCCEEEEECCeecC-cC-HHHHHHHHHh
Confidence 5678999999887 4678899999999975 56 4566666654
No 89
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=34.25 E-value=1.3e+02 Score=27.87 Aligned_cols=41 Identities=12% Similarity=0.135 Sum_probs=33.4
Q ss_pred CCcHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCCchHHHHHHhhhc
Q 009677 63 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHL 108 (529)
Q Consensus 63 ~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~-~~~~p~~l~~~l~~f~ 108 (529)
.+-.+++-.+++. .+.|.+++++||+ +.+ ++.+++.+..+.
T Consensus 73 ~g~~~si~~al~~----~~~~~vlv~~~D~P~i~-~~~i~~l~~~~~ 114 (186)
T TIGR02665 73 PGPLAGILAGLRW----AGTDWVLTVPCDTPFLP-EDLVARLAAALE 114 (186)
T ss_pred CCCHHHHHHHHHh----cCCCeEEEEecCCCcCC-HHHHHHHHHHhh
Confidence 5678889889987 5678999999999 555 899988887764
No 90
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=33.90 E-value=1.5e+02 Score=27.04 Aligned_cols=43 Identities=14% Similarity=0.033 Sum_probs=33.1
Q ss_pred CCcHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCCchHHHHHHhhhc
Q 009677 63 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHL 108 (529)
Q Consensus 63 ~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~-~~~~p~~l~~~l~~f~ 108 (529)
.+-+.++..|++... .+.|.+++++||+ ..+ ++.+++.+..+.
T Consensus 74 ~G~~~~i~~al~~~~--~~~~~vlv~~~D~P~i~-~~~i~~l~~~~~ 117 (186)
T cd04182 74 EGMSSSLAAGLEALP--ADADAVLILLADQPLVT-AETLRALIDAFR 117 (186)
T ss_pred hCHHHHHHHHHHhcc--ccCCEEEEEeCCCCCCC-HHHHHHHHHHHH
Confidence 467788999998832 1479999999999 444 788888887665
No 91
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
Probab=30.78 E-value=3.2e+02 Score=25.69 Aligned_cols=41 Identities=17% Similarity=0.068 Sum_probs=30.4
Q ss_pred CCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcC
Q 009677 63 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 109 (529)
Q Consensus 63 ~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d 109 (529)
.+.++++-.+++. .+.+.+++++||++.+ ++ +.+.+..+.+
T Consensus 81 ~G~~~~l~~a~~~----~~~~~~lv~~~D~~~~-~~-~~~~l~~~~~ 121 (223)
T cd06915 81 LGTGGAIKNALPK----LPEDQFLVLNGDTYFD-VD-LLALLAALRA 121 (223)
T ss_pred CcchHHHHHHHhh----cCCCCEEEEECCcccC-CC-HHHHHHHHHh
Confidence 5678889888887 4557789999999774 55 5566666653
No 92
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=28.42 E-value=2.9e+02 Score=26.33 Aligned_cols=40 Identities=13% Similarity=0.145 Sum_probs=29.7
Q ss_pred CCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhc
Q 009677 63 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 108 (529)
Q Consensus 63 ~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~ 108 (529)
.+-+|++..++.. .+.+.++++.||++.+ .++ .+.+..+.
T Consensus 82 ~g~~~~l~~~~~~----~~~~~~lv~~~D~i~~-~~~-~~~~~~~~ 121 (221)
T cd06422 82 LETGGGIKKALPL----LGDEPFLVVNGDILWD-GDL-APLLLLHA 121 (221)
T ss_pred cccHHHHHHHHHh----cCCCCEEEEeCCeeeC-CCH-HHHHHHHH
Confidence 3568999999988 4447789999999976 665 45555554
No 93
>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]
Probab=28.32 E-value=2.8e+02 Score=32.57 Aligned_cols=114 Identities=17% Similarity=0.136 Sum_probs=69.9
Q ss_pred hhHHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCC-----------------CCCCCEEEEeCCCCCCCCch
Q 009677 36 ETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGV-----------------ISNSPYILGLDCDMYCNDPT 98 (529)
Q Consensus 36 ~~~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~-----------------~s~g~~i~ilDaD~~~~~p~ 98 (529)
+.+.++...-+|....++=.+. +..+-|+++..|..-+. ..|-..|.++|||...++||
T Consensus 494 erieeeL~~~FP~~rv~r~d~D----tt~~k~~~~~~l~~~~~ge~dILiGTQmiaKG~~fp~vtLVgvl~aD~~L~~~D 569 (730)
T COG1198 494 ERIEEELKRLFPGARIIRIDSD----TTRRKGALEDLLDQFANGEADILIGTQMIAKGHDFPNVTLVGVLDADTGLGSPD 569 (730)
T ss_pred HHHHHHHHHHCCCCcEEEEccc----cccchhhHHHHHHHHhCCCCCeeecchhhhcCCCcccceEEEEEechhhhcCCC
Confidence 4466777778896555443222 45667778887776211 13457899999999999998
Q ss_pred H--HHHHHhhhcC------CCCCCceEEEccCceeccCCCc---chHHHHHHHHHHHHHHHhhccCCccc
Q 009677 99 S--ARQAMCFHLD------PKISSSLAFVQFPQKFHNINKY---DIYDGRFRSAYCVQWQGMDGLKGPVL 157 (529)
Q Consensus 99 ~--l~~~l~~f~d------~~~~~~va~VQ~pq~f~n~~~~---d~~~~~~~~f~~~~~~g~d~~~~~~~ 157 (529)
| -+|+...+++ ....+.-.++||- +.+.. ....++...||.-.+..|...+-|-|
T Consensus 570 fRA~Er~fqll~QvaGRAgR~~~~G~VvIQT~----~P~hp~i~~~~~~dy~~F~~~El~~Rk~~~~PPf 635 (730)
T COG1198 570 FRASERTFQLLMQVAGRAGRAGKPGEVVIQTY----NPDHPAIQALKRGDYEAFYEQELAERKELGLPPF 635 (730)
T ss_pred cchHHHHHHHHHHHHhhhccCCCCCeEEEEeC----CCCcHHHHHHHhcCHHHHHHHHHHHHHhcCCCCh
Confidence 7 3344433332 1124556688873 33211 11235567899999888776666654
No 94
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=28.32 E-value=2.1e+02 Score=26.28 Aligned_cols=42 Identities=19% Similarity=0.247 Sum_probs=34.0
Q ss_pred CCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhh
Q 009677 62 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 107 (529)
Q Consensus 62 ~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f 107 (529)
..+-.+.+..|++. .+.+.+++++||+-.-+++.+++.+..+
T Consensus 68 ~~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 68 GKGPLAGILAALRA----APADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 35678899999998 6689999999999544489988887766
No 95
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=27.19 E-value=1.3e+02 Score=30.35 Aligned_cols=27 Identities=22% Similarity=0.229 Sum_probs=21.6
Q ss_pred CCCCEEEEeCCCCCCCCchHHHHHHhhh
Q 009677 80 SNSPYILGLDCDMYCNDPTSARQAMCFH 107 (529)
Q Consensus 80 s~g~~i~ilDaD~~~~~p~~l~~~l~~f 107 (529)
++.+.++.+|-|.+++ ++-|++.+.-+
T Consensus 85 ~~~~Wf~~~DDDtyv~-~~~L~~~L~~~ 111 (252)
T PF02434_consen 85 SDKDWFCFADDDTYVN-VENLRRLLSKY 111 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS
T ss_pred CCceEEEEEeCCceec-HHHHHHHHhhC
Confidence 5779999999999997 88888887654
No 96
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=26.84 E-value=2.1e+02 Score=31.89 Aligned_cols=59 Identities=14% Similarity=0.128 Sum_probs=44.5
Q ss_pred HHHhhhccCC--cEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHH
Q 009677 38 IRQADLVEMP--LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM 104 (529)
Q Consensus 38 ~~~~~~~~~p--~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l 104 (529)
.++....++| ++.++..... .-.++.+|+.+++.. .+.+++..+|-|+..+ ++||.++=
T Consensus 303 ~l~~l~~k~~~~~i~~i~~~~~----~fsr~~~Ld~g~~~~---~~d~L~f~~Dvd~~f~-~~fL~rcR 363 (499)
T PF05679_consen 303 LLEELERKYPFSRIKWISVKTG----EFSRGAALDVGAKKF---PPDSLLFFCDVDMVFT-SDFLNRCR 363 (499)
T ss_pred HHHHHHHhCCccceEEEEecCC----CccHHHHHHhhcccC---CCCcEEEEEeCCcccC-HHHHHHHH
Confidence 3444555555 6778877522 257899999999863 5678999999999998 99998764
No 97
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=26.80 E-value=1.2e+02 Score=27.32 Aligned_cols=54 Identities=19% Similarity=0.124 Sum_probs=40.6
Q ss_pred CCcHHHHHHHHHhcCCCC-CCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccC
Q 009677 63 HFKAGALNVLLRVSGVIS-NSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFP 122 (529)
Q Consensus 63 ~~KAGaLN~~L~~s~~~s-~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~p 122 (529)
.+=+.++=.+++. . +.+.++++-||+..-+++.+++.+..+.+ .+.+++++.++
T Consensus 70 ~G~~~sl~~a~~~----~~~~~~vlv~~~D~p~~~~~~l~~l~~~~~~--~~~~i~~~~~~ 124 (160)
T PF12804_consen 70 QGPLASLLAALSQ----LPSSEPVLVLPCDQPFLSPELLRRLLEALEK--SPADIVVPVFR 124 (160)
T ss_dssp CSHHHHHHHHHHT----STTSSEEEEEETTETTS-HHHHHHHHHHHHH--TTTSEEEEEET
T ss_pred CChHHHHHHHHHh----cccCCCcEEEeCCccccCHHHHHHHHHHHhc--cCCcEEEEEEC
Confidence 5677888888887 4 89999999999953238999998888763 24567766554
No 98
>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose. GDP-mannose-1-phosphate guanylyltransferase, also called GDP-mannose pyrophosphorylase (GDP-MP), catalyzes the formation of GDP-Mannose from mannose-1-phosphate and GTP. Mannose is a key monosaccharide for glycosylation of proteins and lipids. GDP-Mannose is the activated donor for mannosylation of various biomolecules. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase and mannose-1-phosphate guanylyltransferase. This CD covers the N-terminal GDP-mannose-1-phosphate guanylyltransferase domain, whereas the isomerase function is located at the C-terminal half. GDP-MP is a member of the nucleotidyltransferase family of enzymes.
Probab=26.63 E-value=1.9e+02 Score=29.26 Aligned_cols=54 Identities=20% Similarity=0.152 Sum_probs=33.6
Q ss_pred CCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHH
Q 009677 46 MPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM 104 (529)
Q Consensus 46 ~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l 104 (529)
.+.+.++. | |. ..+-|+++-.++.......+.+.++++-+||+..+.+.+.+++
T Consensus 72 ~~~~~ii~-e--p~--~~gTa~ai~~a~~~~~~~~~~~~vlVl~~D~~i~~~~~f~~~l 125 (274)
T cd02509 72 LPEENIIL-E--PE--GRNTAPAIALAALYLAKRDPDAVLLVLPSDHLIEDVEAFLKAV 125 (274)
T ss_pred CCCceEEE-C--CC--CCCcHHHHHHHHHHHHhcCCCCeEEEecchhcccCHHHHHHHH
Confidence 45666664 2 22 2467888877766522112358999999999987544444444
No 99
>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Probab=26.41 E-value=3e+02 Score=27.67 Aligned_cols=41 Identities=10% Similarity=-0.049 Sum_probs=27.7
Q ss_pred cHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhh
Q 009677 65 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 107 (529)
Q Consensus 65 KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f 107 (529)
..+.+-+|++... .+.++|++.|+|+=.-.++.+++.+...
T Consensus 103 r~~SV~~gl~~l~--~~~~~VlihDaarP~vs~~~i~~li~~~ 143 (252)
T PLN02728 103 RQDSVFNGLQEVD--ANSELVCIHDSARPLVTSADIEKVLKDA 143 (252)
T ss_pred hHHHHHHHHHhcc--CCCCEEEEecCcCCCCCHHHHHHHHHHH
Confidence 3556777777621 3578999999976554478777776544
No 100
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.
Probab=24.80 E-value=3.5e+02 Score=28.97 Aligned_cols=43 Identities=14% Similarity=0.025 Sum_probs=32.4
Q ss_pred CCcHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCCchHHHHHHhhhcC
Q 009677 63 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 109 (529)
Q Consensus 63 ~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~-~~~~p~~l~~~l~~f~d 109 (529)
.+-++++-+++... .+.|.++++++|+ +.+ ++.+++.+..+.+
T Consensus 75 ~G~~~ai~~a~~~l---~~~~~~lv~~~D~p~i~-~~~~~~l~~~~~~ 118 (451)
T TIGR01173 75 LGTGHAVLQALPFL---PDDGDVLVLYGDVPLIS-AETLERLLEAHRQ 118 (451)
T ss_pred CchHHHHHHHHHhc---CCCCcEEEEECCcCCcC-HHHHHHHHHHHhh
Confidence 45788888888872 3457899999999 455 7888888877753
No 101
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=24.11 E-value=1.4e+02 Score=33.19 Aligned_cols=50 Identities=16% Similarity=0.242 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCchHH-HHHHHHHHHHHHHHhhhhc
Q 009677 479 LLLSLYILIINFAIVEGMIVRKDKGRISPSA-ILLSSVFFMIFLFFGSIIL 528 (529)
Q Consensus 479 l~~~~w~v~~l~p~~~al~~r~~~~~~p~~~-~~~s~~~~~~~~~~~~~~~ 528 (529)
+++.+.+++..|-|+.-=+.-+.......+| +-.|.+=+++|.++-.+++
T Consensus 171 l~Lvfl~~~syWLFY~vrIl~~~~~dy~~IV~yA~SlvDaLLFiHYlavvL 221 (505)
T PF06638_consen 171 LVLVFLFLFSYWLFYGVRILDPRESDYQGIVSYAVSLVDALLFIHYLAVVL 221 (505)
T ss_pred HHHHHHHHHHHHHHhhheeeechhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555554422221122223333 2346677788888765543
No 102
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=23.68 E-value=2.5e+02 Score=26.30 Aligned_cols=41 Identities=12% Similarity=0.075 Sum_probs=32.7
Q ss_pred CcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhc
Q 009677 64 FKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 108 (529)
Q Consensus 64 ~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~ 108 (529)
+-.+++.++++. .+.+++++++||+-.-+++.+++.+..+.
T Consensus 75 g~~~~i~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 115 (193)
T PRK00317 75 GPLAGILAGLKQ----ARTEWVLVVPCDTPFIPPDLVARLAQAAG 115 (193)
T ss_pred CCHHHHHHHHHh----cCCCeEEEEcCCcCCCCHHHHHHHHHhhh
Confidence 456788888887 67899999999994444899988887664
No 103
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=22.47 E-value=4e+02 Score=28.87 Aligned_cols=54 Identities=13% Similarity=0.036 Sum_probs=37.7
Q ss_pred cEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCCchHHHHHHhhhcC
Q 009677 48 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 109 (529)
Q Consensus 48 ~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~-~~~~p~~l~~~l~~f~d 109 (529)
.+.|+.++. ..+-++++..+++... .+.|.++++++|+ +.. ++.+++.+..+..
T Consensus 69 ~i~~~~~~~-----~~Gt~~al~~a~~~l~--~~~~~vlv~~gD~p~~~-~~~i~~l~~~~~~ 123 (459)
T PRK14355 69 DVSFALQEE-----QLGTGHAVACAAPALD--GFSGTVLILCGDVPLLR-AETLQGMLAAHRA 123 (459)
T ss_pred ceEEEecCC-----CCCHHHHHHHHHHHhh--ccCCcEEEEECCccCcC-HHHHHHHHHHHHh
Confidence 566765432 2467889999988721 1257899999998 444 6788888877754
No 104
>PF15050 SCIMP: SCIMP protein
Probab=22.30 E-value=1.2e+02 Score=27.18 Aligned_cols=41 Identities=10% Similarity=0.216 Sum_probs=22.2
Q ss_pred hhhchhhHHHHHHHHHH-----HHHHHHHHHHHHcCCCcceeeccCc
Q 009677 381 AWRNEQRIWMIKSVTAH-----FYGSMDTILKLLGLRKASFLPTNKV 422 (529)
Q Consensus 381 ~ww~~~~~w~i~~~~~~-----~~~~~~~ll~~l~~~~~~F~VTpK~ 422 (529)
+||++ .||++.++..- +-.++-.+.+++..++.+|+++.--
T Consensus 2 ~WWr~-nFWiiLAVaII~vS~~lglIlyCvcR~~lRqGkkweiakp~ 47 (133)
T PF15050_consen 2 SWWRD-NFWIILAVAIILVSVVLGLILYCVCRWQLRQGKKWEIAKPL 47 (133)
T ss_pred chHHh-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccceeccch
Confidence 58876 57866654321 1112223345555566789888643
No 105
>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline. This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP
Probab=21.87 E-value=2.8e+02 Score=26.62 Aligned_cols=47 Identities=17% Similarity=0.210 Sum_probs=32.3
Q ss_pred CcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHH
Q 009677 47 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQ 102 (529)
Q Consensus 47 p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~ 102 (529)
+++.++.- |.....+-++++..++.. . .+.++++.+|++.+ ++.++.
T Consensus 66 ~~~~~~~~---~~~~~~g~~~s~~~~~~~----~-~~~~lv~~~D~~~~-~~~~~~ 112 (229)
T cd02523 66 PNIKFVYN---PDYAETNNIYSLYLARDF----L-DEDFLLLEGDVVFD-PSILER 112 (229)
T ss_pred CCeEEEeC---cchhhhCcHHHHHHHHHH----c-CCCEEEEeCCEecC-HHHHHH
Confidence 56666642 222235678999999887 4 46789999999875 766554
No 106
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=21.46 E-value=1.3e+02 Score=32.55 Aligned_cols=78 Identities=15% Similarity=0.126 Sum_probs=48.3
Q ss_pred EEecCCCchhh---HHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHH---HHHhcCCCCCCCEEEEeCCCCCCCCchHH
Q 009677 27 IIQETFGESET---IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNV---LLRVSGVISNSPYILGLDCDMYCNDPTSA 100 (529)
Q Consensus 27 v~~~~~~~~~~---~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~---~L~~s~~~s~g~~i~ilDaD~~~~~p~~l 100 (529)
|++|+.+|.+. -.|.....+-.++-|-|.++. -|-+|+ +..+ +.|++++.|||-.-++ -+.|
T Consensus 191 vlvDDfSdKehLkekLDeYv~~fnGlVkV~Rne~R-------EGLI~aRSiGA~~----atGeV~ifLDAHCEVn-tNWl 258 (603)
T KOG3737|consen 191 VLVDDFSDKEHLKEKLDEYVKLFNGLVKVFRNERR-------EGLIQARSIGAQK----ATGEVLIFLDAHCEVN-TNWL 258 (603)
T ss_pred EEeccCCccHHHHHHHHHHHHHhcCEEEEEecchh-------hhhhhhhccchhh----ccccEEEEEecceeee-cccc
Confidence 55666665543 345556678888888886652 223332 2233 7899999999999987 5776
Q ss_pred HHHHhhhcCCCCCCceEEE
Q 009677 101 RQAMCFHLDPKISSSLAFV 119 (529)
Q Consensus 101 ~~~l~~f~d~~~~~~va~V 119 (529)
--.+.... .|..|.-|
T Consensus 259 pPLlAPI~---rdRtvmTV 274 (603)
T KOG3737|consen 259 PPLLAPIS---RDRTVMTV 274 (603)
T ss_pred cccccccc---cCceEEEE
Confidence 54444433 24555544
No 107
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=21.35 E-value=4e+02 Score=25.32 Aligned_cols=41 Identities=15% Similarity=-0.002 Sum_probs=31.8
Q ss_pred CcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhc
Q 009677 64 FKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 108 (529)
Q Consensus 64 ~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~ 108 (529)
+=..++-.+++. .+.+++++++||+-.-+++.+++.+....
T Consensus 79 G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 119 (200)
T PRK02726 79 GPLVAFAQGLPQ----IKTEWVLLLACDLPRLTVDVLQEWLQQLE 119 (200)
T ss_pred ChHHHHHHHHHh----CCCCcEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 445677888887 56799999999997766888888776653
No 108
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=20.26 E-value=4.2e+02 Score=28.40 Aligned_cols=43 Identities=12% Similarity=-0.144 Sum_probs=30.5
Q ss_pred CCcHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCCchHHHHHHhhhc
Q 009677 63 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHL 108 (529)
Q Consensus 63 ~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~-~~~~p~~l~~~l~~f~ 108 (529)
.+-++++-.+++... .+.|.+++++||+ +.. ++.+++.+.++.
T Consensus 82 ~G~~~sl~~a~~~l~--~~~~~~lv~~~D~P~i~-~~~l~~l~~~~~ 125 (446)
T PRK14353 82 LGTAHAVLAAREALA--GGYGDVLVLYGDTPLIT-AETLARLRERLA 125 (446)
T ss_pred CCcHHHHHHHHHHHh--ccCCCEEEEeCCcccCC-HHHHHHHHHhHh
Confidence 467888888887621 1346788899999 555 788888777543
No 109
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=20.26 E-value=2e+02 Score=27.17 Aligned_cols=64 Identities=17% Similarity=0.169 Sum_probs=40.5
Q ss_pred HHhhhccCCcEEEEEccCCCCCCCCCc-HHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhh
Q 009677 39 RQADLVEMPLLVYVSREKRPEHLHHFK-AGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 107 (529)
Q Consensus 39 ~~~~~~~~p~l~yv~Rek~p~~~~~~K-AGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f 107 (529)
+.++..++--++...-++.-..- ..| -.+++.+.+.. .+.+||+-.|-|.+++ ++.|.+.+.-.
T Consensus 41 l~~E~~~y~Dil~~d~~D~y~nl-t~K~~~~~~w~~~~c---~~~~~v~k~DDD~~vn-~~~l~~~L~~~ 105 (195)
T PF01762_consen 41 LQEEAEKYGDILQGDFVDSYRNL-TLKTLAGLKWASKHC---PNAKYVLKVDDDVFVN-PDRLVSFLKSL 105 (195)
T ss_pred hhhhhhhcCceEeeecccccchh-hHHHHHHHHHHHhhC---CchhheeecCcEEEEe-hHHhhhhhhhc
Confidence 44456666777776654432111 223 35666666662 4589999999999997 87776655433
No 110
>KOG4054 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.12 E-value=5.6e+02 Score=24.53 Aligned_cols=79 Identities=14% Similarity=0.172 Sum_probs=44.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHHHHHHHHHHHhh-hcCCCCCchHHHHHHHHHHH
Q 009677 441 SSMFLVPMVSLMILNMAALLCGFIRIIAVGNW-DKLFPQLLLSLYILIINFAIVEGMIV-RKDKGRISPSAILLSSVFFM 518 (529)
Q Consensus 441 ~s~l~~P~~~l~~l~l~alv~gi~~~~~~g~~-~~~~~~l~~~~w~v~~l~p~~~al~~-r~~~~~~p~~~~~~s~~~~~ 518 (529)
..+++.|+..++++.+..+..|-.+...+.+- .++. |-.-+..-++|.+.|+.. |++|-++=...+.. ..+.+
T Consensus 37 lK~lifvh~lI~v~mlak~~l~hl~~~k~d~v~~py~----wey~~~~SllpslLgllsf~rnkv~~L~l~m~a-~~lf~ 111 (183)
T KOG4054|consen 37 LKKLIFVHALIWVLMLAKMSLGHLRLLKHDQVPMPYQ----WEYVWALSLLPSLLGLLSFRRNKVSYLVLYMIA-MGLFM 111 (183)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhcccCCCchh----HHHHHHHHHHHHHHHHHhcccccHHHHHHHHHH-HHHHH
Confidence 34578889999988888887777776654321 1121 222223446777778765 55555443333333 34444
Q ss_pred HHHHHh
Q 009677 519 IFLFFG 524 (529)
Q Consensus 519 ~~~~~~ 524 (529)
||-+++
T Consensus 112 i~p~~~ 117 (183)
T KOG4054|consen 112 IFPLVY 117 (183)
T ss_pred HHHHHH
Confidence 555543
Done!