Query 009677
Match_columns 529
No_of_seqs 257 out of 1549
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 10:34:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009677.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009677hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 4.9E-41 1.7E-45 384.2 32.2 361 47-507 212-584 (802)
2 2z86_A Chondroitin synthase; G 99.3 4.4E-12 1.5E-16 140.3 12.9 155 46-276 147-337 (625)
3 3bcv_A Putative glycosyltransf 99.3 6.3E-12 2.2E-16 120.9 9.4 82 17-109 28-111 (240)
4 1qg8_A Protein (spore coat pol 99.3 4.8E-12 1.7E-16 123.0 8.2 195 16-288 23-236 (255)
5 1xhb_A Polypeptide N-acetylgal 99.2 1.5E-11 5.2E-16 131.5 10.6 208 17-300 53-301 (472)
6 2z86_A Chondroitin synthase; G 99.2 2.7E-11 9.1E-16 134.0 7.1 193 16-291 397-597 (625)
7 2d7i_A Polypeptide N-acetylgal 99.1 2.1E-10 7.1E-15 126.3 13.0 207 18-299 137-378 (570)
8 2ffu_A Ppgalnact-2, polypeptid 99.1 3E-10 1E-14 122.6 10.5 81 18-109 91-173 (501)
9 3ckj_A Putative uncharacterize 98.9 5.8E-10 2E-14 114.1 5.9 158 62-288 116-292 (329)
10 4fix_A UDP-galactofuranosyl tr 98.8 1.1E-08 3.7E-13 114.6 9.9 67 45-121 238-304 (657)
11 3l7i_A Teichoic acid biosynthe 98.7 1.5E-09 5.2E-14 122.6 0.0 169 15-261 23-199 (729)
12 2fy7_A Beta-1,4-galactosyltran 98.6 3.2E-08 1.1E-12 99.9 7.4 135 63-292 111-263 (287)
13 3f1y_A Mannosyl-3-phosphoglyce 98.2 1.2E-06 4.1E-11 92.0 5.6 52 62-121 164-216 (387)
14 2nxv_A ATP synthase subunits r 97.6 0.00013 4.4E-09 71.2 8.0 52 63-119 60-112 (249)
15 2bo4_A Mannosylglycerate synth 97.2 0.003 1E-07 66.3 13.0 41 63-108 74-119 (397)
16 2zu9_A Mannosyl-3-phosphoglyce 84.5 1.4 4.7E-05 45.9 6.5 37 63-105 143-182 (394)
17 2wvl_A Mannosyl-3-phosphoglyce 80.9 5.4 0.00019 41.1 9.1 40 62-104 141-180 (391)
18 1fo8_A Alpha-1,3-mannosyl-glyc 80.7 2.9 9.9E-05 42.7 7.1 46 67-120 89-137 (343)
19 3lw6_A FI08434P, beta-4-galact 68.9 10 0.00036 37.6 7.3 33 62-96 96-128 (287)
20 3q80_A 2-C-methyl-D-erythritol 43.4 41 0.0014 31.8 6.6 45 65-109 83-127 (231)
21 3d5n_A Q97W15_sulso; NESG, SSR 42.5 45 0.0015 30.2 6.5 40 64-107 72-112 (197)
22 3juk_A UDP-glucose pyrophospho 38.2 53 0.0018 31.3 6.6 52 48-109 96-151 (281)
23 2j0a_A Beta-1,3-N-acetylglucos 28.7 70 0.0024 31.1 5.6 27 80-107 92-118 (280)
24 2y6p_A 3-deoxy-manno-octuloson 28.2 60 0.0021 29.7 4.9 41 63-109 72-113 (234)
25 2wee_A MOBA-related protein; u 27.2 1.1E+02 0.0036 27.0 6.2 42 63-106 79-120 (197)
26 2xwl_A 2-C-methyl-D-erythritol 26.7 93 0.0032 28.1 5.9 41 64-107 78-118 (223)
27 1e5k_A Molybdopterin-guanine d 24.3 79 0.0027 28.7 4.8 39 63-106 77-116 (201)
28 2yc3_A 2-C-methyl-D-erythritol 24.0 2.6E+02 0.0089 25.2 8.5 44 63-109 81-125 (228)
29 3f1c_A Putative 2-C-methyl-D-e 23.5 56 0.0019 30.7 3.7 46 64-109 84-132 (246)
30 4fce_A Bifunctional protein GL 22.8 1.6E+02 0.0056 29.8 7.4 43 63-109 83-126 (459)
31 2waw_A MOBA relate protein; un 21.6 1.9E+02 0.0065 25.2 6.8 42 63-106 79-120 (199)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=4.9e-41 Score=384.18 Aligned_cols=361 Identities=19% Similarity=0.294 Sum_probs=274.1
Q ss_pred CcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceec
Q 009677 47 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFH 126 (529)
Q Consensus 47 p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~ 126 (529)
.++.|+.|+++ +++|+||+|.+++. +++|||+++|||++++ |++|++.+.+|.+ +|++++||+|+.+.
T Consensus 212 ~~v~~i~~~~~----~~GKa~alN~gl~~----a~gd~Il~lDaD~~~~-pd~L~~lv~~~~~---dp~v~~V~~~~~~~ 279 (802)
T 4hg6_A 212 LGVVYSTRERN----EHAKAGNMSAALER----LKGELVVVFDADHVPS-RDFLARTVGYFVE---DPDLFLVQTPHFFI 279 (802)
T ss_dssp HTCEEEECSSC----CSHHHHHHHHHHHH----CCCSEEEECCTTEEEC-TTHHHHHHHHHHH---SSSCCEEECCCCBS
T ss_pred cCcEEEEecCC----CCcchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHHhc---CCCeEEEeccEEEe
Confidence 47889999876 58999999999999 8999999999999998 9999999999963 58999999999998
Q ss_pred cCCCc-------chHHHHHHHHHHHHHHHhhccCCcccccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhccc
Q 009677 127 NINKY-------DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQN 199 (529)
Q Consensus 127 n~~~~-------d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~ 199 (529)
|.++. +.+.++...++.....+.+.+++++++|+++++||+++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al------------------------------ 329 (802)
T 4hg6_A 280 NPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRAL------------------------------ 329 (802)
T ss_dssp SCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHH------------------------------
T ss_pred CCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHH------------------------------
Confidence 76411 11112346788899999999999999999999999999
Q ss_pred CCCCCCchhhhHHhhccccccccccccccccccc-cCCCCccchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHH
Q 009677 200 NANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLL 278 (529)
Q Consensus 200 ~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~ 278 (529)
+++| |++++++||.+++.+++++||++.|+++ +..++.+|+|+.+++
T Consensus 330 ------------------------------~~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~--~~~~~~~p~t~~~~~ 377 (802)
T 4hg6_A 330 ------------------------------DEAGGFAGETITEDAETALEIHSRGWKSLYIDR--AMIAGLQPETFASFI 377 (802)
T ss_dssp ------------------------------HHHTTCCCSSSSHHHHHHHHHHTTTCCEEECCC--CCEEECCCCSHHHHH
T ss_pred ------------------------------HHcCCcCCCCcchHHHHHHHHHHcCCeEEEecC--CEEEecCCCCHHHHH
Confidence 6786 9999999999999999999999999987 789999999999999
Q ss_pred hhhhhhccccccccccccCccccCCCCCCHHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHhCCccccCCCchhHHHHH
Q 009677 279 IQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFS 358 (529)
Q Consensus 279 ~Qr~RWa~G~~qv~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~l~~i~~l~y~~~P~~~ll~g~~~~p~~~~~~~~~~~ 358 (529)
+||.||++|.+|+++ +++|++ .+++++.||++|+....++ +.+++.++++++|+++++++..+++.....++..
T Consensus 378 ~Qr~RW~~G~~q~l~-~~~pl~--~~~l~~~~rl~~l~~~~~~-~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~-- 451 (802)
T 4hg6_A 378 QQRGRWATGMMQMLL-LKNPLF--RRGLGIAQRLCYLNSMSFW-FFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAY-- 451 (802)
T ss_dssp HHHHHHHHHHHHHHH-HSCTTS--CSSCCHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHH--
T ss_pred HHHHHHHccHHHHHH-HhCccc--cCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHH--
Confidence 999999999999987 557876 3789999999999988887 8888899999999999999998876432222221
Q ss_pred HHHHHHHHHH-HHHHHHhCCccchhhchhhHHHHHHHHHHHHHHHHHHHHHHcCCCcceeeccCccchhhhhhhccccee
Q 009677 359 FIFISAICKH-LQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFD 437 (529)
Q Consensus 359 ~~~~~~~~~~-ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~~ll~~l~~~~~~F~VTpK~~~~~~~~~y~~~~f~ 437 (529)
++++.+.. ++.....+.....||.. ++..+ ..++.+...+..++++++.+|+||+|+...+. +.
T Consensus 452 --~lp~~l~~~~~~~~~~~~~r~~~~~~----l~~~~-~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~------~~-- 516 (802)
T 4hg6_A 452 --MPGYLAVSFLVQNALFARQRWPLVSE----VYEVA-QAPYLARAIVTTLLRPRSARFAVTAKDETLSE------NY-- 516 (802)
T ss_dssp --HHHHHHHHHHHHHHHHTTTSCTTHHH----HHHHH-HHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSS------CC--
T ss_pred --HHHHHHHHHHHHHHHhcCcHHHHHHH----HHHHH-HHHHHHHHHHHHHhCCCCCcceECCCCccccc------cc--
Confidence 12222222 22222223333345543 23322 33444455555667889999999999976542 11
Q ss_pred ecccchhhHHHHHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHH---HhhhcCCCCCch
Q 009677 438 FQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEG---MIVRKDKGRISP 507 (529)
Q Consensus 438 ~~~~s~l~~P~~~l~~l~l~alv~gi~~~~~~g~~~~~~~~l~~~~w~v~~l~p~~~a---l~~r~~~~~~p~ 507 (529)
.+.+..|++++++++++++++|++++...+. .....+++++|.+++++....+ .+.|+++++.|+
T Consensus 517 ---~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~~~R~~~R 584 (802)
T 4hg6_A 517 ---ISPIYRPLLFTFLLCLSGVLATLVRWVAFPG--DRSVLLVVGGWAVLNVLLVGFALRAVAEKQQRRAAPR 584 (802)
T ss_dssp ---BCTTCHHHHHHHHHHHHHHHHHHHHHHHCGG--GHHHHHHHHHHHHHHHHHHHHHHTTTBCCCCSCCCCC
T ss_pred ---hhhHHHHHHHHHHHHHHHHHHHHHHHhccCC--ccchhhhhhHHHHHHHHHHHHHHHHHhcCCCcccccc
Confidence 1256789999999999999999999875432 2233445555655555555555 444666665554
No 2
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.33 E-value=4.4e-12 Score=140.26 Aligned_cols=155 Identities=17% Similarity=0.132 Sum_probs=106.5
Q ss_pred CCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCcee
Q 009677 46 MPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKF 125 (529)
Q Consensus 46 ~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f 125 (529)
.+++.|+.++++ .++|++|+|.|++. ++||||+++|+|.++. |++|.+++..+.+ ++++++++..+.+
T Consensus 147 ~~~i~~i~~~~~----~~g~~~a~N~g~~~----a~g~~v~~lD~D~~~~-~~~l~~~~~~~~~---~~~~~~~g~~~~~ 214 (625)
T 2z86_A 147 LLNIKYVRQKDY----GYQLCAVRNLGLRA----AKYNYVAILDCDMAPN-PLWVQSYMELLAV---DDNVALIGPRKYI 214 (625)
T ss_dssp TSCEEEEEECCC----SCCHHHHHHHHHHH----CCSSEEEEECTTEEEC-TTHHHHHHHHHHH---CTTEEEECCEEEE
T ss_pred cCCeEEEEeCCC----CcchhHHHHHHHHh----CCcCEEEEECCCCCCC-HHHHHHHHHHHhc---CCceEEEEeeeec
Confidence 468999987643 35899999999999 8999999999999997 9999999999874 5788888766655
Q ss_pred ccCCCcchHHHH---------------HHHHHH------------HHHHHhhc---cC--CcccccccceEeccccccCC
Q 009677 126 HNINKYDIYDGR---------------FRSAYC------------VQWQGMDG---LK--GPVLSGTGYYIKRESLYADF 173 (529)
Q Consensus 126 ~n~~~~d~~~~~---------------~~~f~~------------~~~~g~d~---~~--~~~~~Gtg~v~RR~aL~g~p 173 (529)
.+... .+... ...+.. ......+. .. ...++|+++++||+++
T Consensus 215 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l---- 288 (625)
T 2z86_A 215 DTSKH--TYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWL---- 288 (625)
T ss_dssp CCTTC--CHHHHHHSTTGGGTSCC---------------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHH----
T ss_pred cCccc--chhhcccchHHhhhcchhccCCchhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHH----
Confidence 43321 11000 000000 00000011 11 1246899999999999
Q ss_pred chhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCCCc---cchHHHHHHH
Q 009677 174 THTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSV---SEDLFTGFIL 249 (529)
Q Consensus 174 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~sv---tED~~t~~~l 249 (529)
+++| |+.... .||.++++|+
T Consensus 289 --------------------------------------------------------~~iGgfde~~~~~g~ED~dl~~Rl 312 (625)
T 2z86_A 289 --------------------------------------------------------FRAGWFDEEFTHWGGEDNEFGYRL 312 (625)
T ss_dssp --------------------------------------------------------HHHCCCCTTCSSCCCHHHHHHHHH
T ss_pred --------------------------------------------------------HHhCCCccccccCCcchhhhhhhH
Confidence 5787 877654 5999999999
Q ss_pred HhCCCeEEEeCCCCCceecccCCCHHH
Q 009677 250 HCKGWTSTYLTPFRPQFLGTSTTNLND 276 (529)
Q Consensus 250 ~~~Gwrs~y~~~~~~~~~g~aP~~l~~ 276 (529)
+.+||++.|+++ +...-..|.+-..
T Consensus 313 ~~~G~~i~~~p~--~~v~H~~~~~~~~ 337 (625)
T 2z86_A 313 YREGCYFRSVEG--AMAYHQEPPGKEN 337 (625)
T ss_dssp HHTTCEEEECGG--GCEEEECCC----
T ss_pred HhCCceEEEccc--chhhccCCccccc
Confidence 999999999986 5555566665443
No 3
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.28 E-value=6.3e-12 Score=120.90 Aligned_cols=82 Identities=18% Similarity=0.111 Sum_probs=62.7
Q ss_pred ccccccceEEEEecCCCchh--hHHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCC
Q 009677 17 NSQNHSTIIEIIQETFGESE--TIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYC 94 (529)
Q Consensus 17 ~~~~h~~~i~v~~~~~~~~~--~~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~ 94 (529)
..|+++..--|++||+++++ ++++....+.|++.+++. + ..++++|.|.|++. ++||||+.+|+|.++
T Consensus 28 ~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~~-~-----n~G~~~a~N~g~~~----a~g~~i~~lD~Dd~~ 97 (240)
T 3bcv_A 28 LAQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIHK-K-----NAGLGMACNSGLDV----ATGEYVAFCDSDDYV 97 (240)
T ss_dssp HTCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEEC-C-----CCCHHHHHHHHHHH----CCSSEEEECCTTCCC
T ss_pred HhCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEEC-C-----CCChHHHHHHHHHH----cCCCEEEEECCCCcC
Confidence 45667654334445544443 355556667899999963 2 26899999999999 899999999999999
Q ss_pred CCchHHHHHHhhhcC
Q 009677 95 NDPTSARQAMCFHLD 109 (529)
Q Consensus 95 ~~p~~l~~~l~~f~d 109 (529)
. |++|++.+..+.+
T Consensus 98 ~-~~~l~~l~~~~~~ 111 (240)
T 3bcv_A 98 D-SDMYMTMYNVAQK 111 (240)
T ss_dssp C-TTHHHHHHHHHHH
T ss_pred C-HHHHHHHHHHHHh
Confidence 8 9999999998874
No 4
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.28 E-value=4.8e-12 Score=123.04 Aligned_cols=195 Identities=13% Similarity=-0.037 Sum_probs=116.8
Q ss_pred CccccccceEEEEecCCCchhh--HHHhhhccCCcEEEEEccCCCC----CCCCCcHHHHHHHHHhcCCCCCCCEEEEeC
Q 009677 16 GNSQNHSTIIEIIQETFGESET--IRQADLVEMPLLVYVSREKRPE----HLHHFKAGALNVLLRVSGVISNSPYILGLD 89 (529)
Q Consensus 16 ~~~~~h~~~i~v~~~~~~~~~~--~~~~~~~~~p~l~yv~Rek~p~----~~~~~KAGaLN~~L~~s~~~s~g~~i~ilD 89 (529)
+..|+++..--|++|+++++++ ++..... .|++.|+..+.. + ....++++|+|.|++. ++||||+.+|
T Consensus 23 l~~q~~~~~eiivvDd~S~d~t~~~~~~~~~-~~~i~~i~~~~~-~~~~~~~n~G~~~a~N~gi~~----a~g~~i~~lD 96 (255)
T 1qg8_A 23 ILSQTFSDFELFIMDDNSNEETLNVIRPFLN-DNRVRFYQSDIS-GVKERTEKTRYAALINQAIEM----AEGEYITYAT 96 (255)
T ss_dssp HHTCSCCCEEEEEEECSCCHHHHHHHGGGGG-STTEEEEECCCC-SHHHHHSSCHHHHHHHHHHHH----CCCSEEEEEE
T ss_pred HHhccCCceEEEEEECCCCchHHHHHHHHhh-cCCEEEEecccc-cccccccccCHHHHHHHHHHH----cCCCEEEEeC
Confidence 3457777544345565555433 3343333 689999988611 0 0126899999999999 8999999999
Q ss_pred CCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceec--cCCCcchHHHHHHHHHHHHHHHhhccCCcccccccceEecc
Q 009677 90 CDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFH--NINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRE 167 (529)
Q Consensus 90 aD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~--n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~ 167 (529)
+|.++. |++|.+.+..+.+ +|++++|.+..... +.+.. +.... ... .............|++.++||+
T Consensus 97 ~Dd~~~-~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~-~~~~~----~~~-~~~~~~~~~~~~~~~~~~~rr~ 166 (255)
T 1qg8_A 97 DDNIYM-PDRLLKMVRELDT---HPEKAVIYSASKTYHLNENRD-IVKET----VRP-AAQVTWNAPCAIDHCSVMHRYS 166 (255)
T ss_dssp TTEEEC-TTHHHHHHHHHHH---CTTCCEEEEEEEEEEEC---C-EEEEE----EEC-CCSCBSCCTTTSCGGGEEEETH
T ss_pred CCCccC-hHHHHHHHHHHHh---CCCceEEEeceEEEEeCCCCc-chhhc----cCc-hHHHHHhhcCCCccceEEEEHH
Confidence 999998 9999999999874 46788888766554 32211 10000 000 0000112233457889999999
Q ss_pred ccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc--c------C-CCC
Q 009677 168 SLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG--I------L-YQS 238 (529)
Q Consensus 168 aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG--~------~-~~s 238 (529)
++ +++| | . ...
T Consensus 167 ~~------------------------------------------------------------~~~g~~f~~~~~~~~~~~ 186 (255)
T 1qg8_A 167 VL------------------------------------------------------------EKVKEKFGSYWDESPAFY 186 (255)
T ss_dssp HH------------------------------------------------------------HHHHHHHSSSSCCCGGGS
T ss_pred HH------------------------------------------------------------HhhcccccccccCCcccc
Confidence 98 3443 4 1 124
Q ss_pred ccchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHH--hhhhhhcccc
Q 009677 239 VSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLL--IQGTRWGSGL 288 (529)
Q Consensus 239 vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~--~Qr~RWa~G~ 288 (529)
..||.+..+|+..+| +..|+++ ....+-..|.+.+... +|+.||.+..
T Consensus 187 ~~eD~~~~~r~~~~g-~~~~~~~-~~~~~r~~~~s~s~~~~~~~~~~~~~~~ 236 (255)
T 1qg8_A 187 RIGDARFFWRVNHFY-PFYPLDE-ELDLNYITDQSIHFQLFELEKNEFVRNL 236 (255)
T ss_dssp TTHHHHHHHHHTTTC-CBEEEEE-EEEEEEEC--------------CTGGGS
T ss_pred hHHHHHHHHHHHHhC-CEEEecC-cEEEEEEcCCccchhHHHHHHHHHHHhc
Confidence 689999999999987 6888875 2344445667766655 5555555443
No 5
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.24 E-value=1.5e-11 Score=131.49 Aligned_cols=208 Identities=14% Similarity=0.116 Sum_probs=129.5
Q ss_pred ccccccce-EEEE-ecCCCch---hhHHHhhhccCC-cEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCC
Q 009677 17 NSQNHSTI-IEII-QETFGES---ETIRQADLVEMP-LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDC 90 (529)
Q Consensus 17 ~~~~h~~~-i~v~-~~~~~~~---~~~~~~~~~~~p-~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDa 90 (529)
..++++.. .+|+ +||.+++ .+++++...++| ++.+++.++| .++++|+|.|++. +.||||+++|+
T Consensus 53 ~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n-----~G~~~a~N~g~~~----A~gd~i~flD~ 123 (472)
T 1xhb_A 53 INRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQR-----SGLIRARLKGAAV----SRGQVITFLDA 123 (472)
T ss_dssp HHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSC-----CCHHHHHHHHHHH----CCSSEEEEEES
T ss_pred HhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCC-----CChHHHHHHHHHh----ccCCeEEEECC
Confidence 34566653 3433 3444333 224555566788 8999988765 5799999999999 89999999999
Q ss_pred CCCCCCchHHHHHHhhhcCCCCCCceEEEccCce-eccCCCc------ch----HHHHH-----HH-HHHHHHHHhh---
Q 009677 91 DMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQK-FHNINKY------DI----YDGRF-----RS-AYCVQWQGMD--- 150 (529)
Q Consensus 91 D~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~-f~n~~~~------d~----~~~~~-----~~-f~~~~~~g~d--- 150 (529)
|..++ |++|.+++..+.+ +++++.+ |.. ..+.+.. .. +.... .. -.....+..+
T Consensus 124 D~~~~-p~~L~~ll~~~~~---~~~~~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (472)
T 1xhb_A 124 HCECT-AGWLEPLLARIKH---DRRTVVC--PIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTL 197 (472)
T ss_dssp SEEEC-TTCHHHHHHHHHH---CTTEEEE--EEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTS
T ss_pred CeEeC-ccHHHHHHHHHHh---CCCEEEE--eeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCC
Confidence 99998 9999999998874 4555443 211 1111000 00 00000 00 0000000001
Q ss_pred ccCCcccccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhcccccccccccccccc
Q 009677 151 GLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGE 230 (529)
Q Consensus 151 ~~~~~~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~ 230 (529)
....+...|++.++||+++ +
T Consensus 198 ~~~~~~~~g~~~~irr~~~------------------------------------------------------------~ 217 (472)
T 1xhb_A 198 PVRTPTMAGGLFSIDRDYF------------------------------------------------------------Q 217 (472)
T ss_dssp CEECSBCCSSSEEEEHHHH------------------------------------------------------------H
T ss_pred cccCccccceeEEEEHHHH------------------------------------------------------------H
Confidence 2234456788888999988 6
Q ss_pred ccc-cCCCCc---cchHHHHHHHHhCCCeEEEeCCCCCc--eecccCC----C-----HHHHHhhhhhhccccccccccc
Q 009677 231 EVG-ILYQSV---SEDLFTGFILHCKGWTSTYLTPFRPQ--FLGTSTT----N-----LNDLLIQGTRWGSGLTDVGLSR 295 (529)
Q Consensus 231 ~iG-~~~~sv---tED~~t~~~l~~~Gwrs~y~~~~~~~--~~g~aP~----~-----l~~~~~Qr~RWa~G~~qv~~~~ 295 (529)
++| |+++.. .||++.++|+...|+++.|++..++. .....|. . .....+...||..+..+.++.
T Consensus 218 ~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~- 296 (472)
T 1xhb_A 218 EIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYI- 296 (472)
T ss_dssp HTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHH-
T ss_pred HcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcEEEEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 787 877654 79999999999999999998752110 0111222 2 456777888999999888773
Q ss_pred cCccc
Q 009677 296 FCPLL 300 (529)
Q Consensus 296 ~~p~~ 300 (529)
..|-.
T Consensus 297 ~~p~~ 301 (472)
T 1xhb_A 297 ISPGV 301 (472)
T ss_dssp TSTTG
T ss_pred hCccc
Confidence 44543
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.15 E-value=2.7e-11 Score=134.00 Aligned_cols=193 Identities=17% Similarity=0.104 Sum_probs=127.9
Q ss_pred CccccccceEEEEecCCCchhh--HHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCC
Q 009677 16 GNSQNHSTIIEIIQETFGESET--IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY 93 (529)
Q Consensus 16 ~~~~~h~~~i~v~~~~~~~~~~--~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~ 93 (529)
+..|++++.--|++||++++++ ++.......|++.+++ +++ .++++|+|.|++. ++||||+.+|+|.+
T Consensus 397 ~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~-~~n-----~G~~~a~n~g~~~----a~g~~i~~ld~D~~ 466 (625)
T 2z86_A 397 ALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFIS-QKN-----KGIGSASNTAVRL----CRGFYIGQLDSDDF 466 (625)
T ss_dssp HHSSSCCSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEE-ECC-----CCHHHHHHHHHHH----CCSSEEEECCTTCE
T ss_pred HHhCcCCCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEe-CCC-----CCHHHHHHHHHHh----cCCCEEEEECCCcc
Confidence 3457777643345555544433 4444555678999996 333 6899999999999 89999999999999
Q ss_pred CCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHH-HHHHHHHHHHHHhhccCCcccccccceEeccccccC
Q 009677 94 CNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDG-RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYAD 172 (529)
Q Consensus 94 ~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~-~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL~g~ 172 (529)
+. |+.|.+.+..|.+ ++++++|.+...+.+.+..-.... ....+ ..+.+...+++|++.++||+++
T Consensus 467 ~~-~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~r~~~--- 533 (625)
T 2z86_A 467 LE-PDAVELCLDEFRK---DLSLACVYTTNRNIDREGNLISNGYNWPIY------SREKLTSAMICHHFRMFTARAW--- 533 (625)
T ss_dssp EC-TTHHHHHHHHHHH---CTTCSEEEEEEEEECTTSCEEEECCCCSSC------CHHHHTTSCCCCSCEEEEHHHH---
T ss_pred cC-hhHHHHHHHHHHh---CCCeeEEEeeeEEECCCCCEeccCcccccC------CHHHHhhcccCCceEEEEHHHH---
Confidence 97 9999999988863 577888887666554332110000 00000 0111223456788999999988
Q ss_pred CchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-cCCC-CccchHHHHHHHH
Q 009677 173 FTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQ-SVSEDLFTGFILH 250 (529)
Q Consensus 173 p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~-svtED~~t~~~l~ 250 (529)
+++| |+.. ...||.+..+|+.
T Consensus 534 ---------------------------------------------------------~~~ggfd~~~~~~eD~dl~~r~~ 556 (625)
T 2z86_A 534 ---------------------------------------------------------NLTEGFNESISNAVDYDMYLKLS 556 (625)
T ss_dssp ---------------------------------------------------------TTTTCCCSSCSSCHHHHHHHHHT
T ss_pred ---------------------------------------------------------HHhCCCCCccCChHHHHHHHHHH
Confidence 5776 7665 4689999999999
Q ss_pred hCCCeEEEeCCCCCcee---cccCCCHHHHHhhhhhhccccccc
Q 009677 251 CKGWTSTYLTPFRPQFL---GTSTTNLNDLLIQGTRWGSGLTDV 291 (529)
Q Consensus 251 ~~Gwrs~y~~~~~~~~~---g~aP~~l~~~~~Qr~RWa~G~~qv 291 (529)
..| +..|+++ ++.. .....+......|+.+|.+..-+.
T Consensus 557 ~~g-~~~~~~~--~~~~~r~h~~~~s~~~~~~~~~~~~~~~~~~ 597 (625)
T 2z86_A 557 EVG-PFKHINK--ICYNRVLHGENTSIKKLDIQKENHFKVVNES 597 (625)
T ss_dssp TTS-CEEEEEE--EEEEEECC----CCSSHHHHHHHHHHHHHHH
T ss_pred HhC-CEEEeCC--cEEEEEECCCccchhhHHHHHHHHHHHHHHH
Confidence 999 8999986 4432 334455666677777766544333
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.13 E-value=2.1e-10 Score=126.27 Aligned_cols=207 Identities=14% Similarity=0.080 Sum_probs=128.6
Q ss_pred cccccce-EE-EEecCCCchhh---HHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCC
Q 009677 18 SQNHSTI-IE-IIQETFGESET---IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDM 92 (529)
Q Consensus 18 ~~~h~~~-i~-v~~~~~~~~~~---~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~ 92 (529)
.++++.. .+ |++||.+++++ +++....+.|++.+++.+++ .++++|.|.|++. ++||||+++|+|.
T Consensus 137 ~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n-----~G~~~A~N~G~~~----A~gd~i~fLD~D~ 207 (570)
T 2d7i_A 137 NRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKR-----EGLIRTRMLGASV----ATGDVITFLDSHC 207 (570)
T ss_dssp HHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSC-----CCHHHHHHHHHHH----CCSSEEEECCSSE
T ss_pred hcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCC-----CCHHHHHHHHHHh----cCCCEEEEEcCCc
Confidence 4556653 23 33454444433 44555567799999988765 6899999999999 8999999999999
Q ss_pred CCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCC-------cchHHH--HHHHHHHHHHH--------HhhccCCc
Q 009677 93 YCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINK-------YDIYDG--RFRSAYCVQWQ--------GMDGLKGP 155 (529)
Q Consensus 93 ~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~-------~d~~~~--~~~~f~~~~~~--------g~d~~~~~ 155 (529)
.++ |++|.+++..+.+ +++++ |.....+.+.+. ...... ....++..... .......+
T Consensus 208 ~~~-p~~L~~ll~~l~~---~~~~v-v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (570)
T 2d7i_A 208 EAN-VNWLPPLLDRIAR---NRKTI-VCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESP 282 (570)
T ss_dssp EEC-TTCSHHHHHHHHH---CTTEE-EEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECS
T ss_pred ccc-ccHHHHHHHHHHh---CCCEE-EeeeeeccCCCchhhccccCCcccccccccccccccccchhhhccCCCcceecc
Confidence 997 9999999999875 34443 322111111110 000000 00000000000 00111234
Q ss_pred ccccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc-c
Q 009677 156 VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-I 234 (529)
Q Consensus 156 ~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~ 234 (529)
...|++.++||+++ +++| |
T Consensus 283 ~~~g~~~~irr~~~------------------------------------------------------------~~iGgf 302 (570)
T 2d7i_A 283 VMAGGLFAVDRKWF------------------------------------------------------------WELGGY 302 (570)
T ss_dssp SCCSSSEEEEHHHH------------------------------------------------------------HHTTSS
T ss_pred cccceEEEEEHHHH------------------------------------------------------------HhcCCC
Confidence 45688888888888 6787 8
Q ss_pred CCCCc---cchHHHHHHHHhCCCeEEEeCCCCCc--eecccCCC-------HHHHHhhhhhhccccccccccccCcc
Q 009677 235 LYQSV---SEDLFTGFILHCKGWTSTYLTPFRPQ--FLGTSTTN-------LNDLLIQGTRWGSGLTDVGLSRFCPL 299 (529)
Q Consensus 235 ~~~sv---tED~~t~~~l~~~Gwrs~y~~~~~~~--~~g~aP~~-------l~~~~~Qr~RWa~G~~qv~~~~~~p~ 299 (529)
+.+.. .||++.++|+...||+++|++..++. ..+..|.+ .+...+-..||.....+.+..+ .|.
T Consensus 303 De~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~~-~p~ 378 (570)
T 2d7i_A 303 DPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR-RPE 378 (570)
T ss_dssp CTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCSSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHTT-CGG
T ss_pred CCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEccccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhc-Ccc
Confidence 76644 69999999999999999998752211 11223322 4566777789999988887633 353
No 8
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.07 E-value=3e-10 Score=122.59 Aligned_cols=81 Identities=11% Similarity=0.063 Sum_probs=61.6
Q ss_pred cccccce-EEE-EecCCCchhhHHHhhhccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 009677 18 SQNHSTI-IEI-IQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN 95 (529)
Q Consensus 18 ~~~h~~~-i~v-~~~~~~~~~~~~~~~~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~ 95 (529)
.|+++.. .+| ++||.+++++.. ....+.|++.+++.+++ .++++|+|.|++. ++||||+++|+|..++
T Consensus 91 ~q~~~~~~~EIIvVDDgS~D~t~~-~~~~~~~~v~vi~~~~n-----~G~~~A~N~G~~~----A~gd~i~flD~D~~~~ 160 (501)
T 2ffu_A 91 KKSPPHLIKEIILVDDYSNDPEDG-ALLGKIEKVRVLRNDRR-----EGLMRSRVRGADA----AQAKVLTFLDSHCECN 160 (501)
T ss_dssp HHSCGGGEEEEEEEECSCSCTHHH-HGGGGBTTEEEEECSSC-----CHHHHHHHHHHHH----CCSSEEEECCSSEEEC
T ss_pred hhCchhhceeEEEEECCCCchHHH-HHHhcCCCEEEEECCCC-----cCHHHHHHHHHHh----cCCCEEEEECCCcccC
Confidence 4555552 343 345544444432 23456789999988765 5799999999999 8999999999999998
Q ss_pred CchHHHHHHhhhcC
Q 009677 96 DPTSARQAMCFHLD 109 (529)
Q Consensus 96 ~p~~l~~~l~~f~d 109 (529)
|++|.+.+..+.+
T Consensus 161 -p~~L~~ll~~~~~ 173 (501)
T 2ffu_A 161 -EHWLEPLLERVAE 173 (501)
T ss_dssp -TTCHHHHHHHHHH
T ss_pred -ccHHHHHHHHHHh
Confidence 9999999998874
No 9
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=98.93 E-value=5.8e-10 Score=114.07 Aligned_cols=158 Identities=15% Similarity=-0.051 Sum_probs=96.1
Q ss_pred CCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCC-CCCchHHHHHHhhhcCCCCCCceEEEccCceeccC-CC-----cchH
Q 009677 62 HHFKAGALNVLLRVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNI-NK-----YDIY 134 (529)
Q Consensus 62 ~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~-~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~-~~-----~d~~ 134 (529)
..+|++|+|.|++. ++||||+.+|+|.+ +. |++|.+.+..+.+ ++++++|++....... +. ....
T Consensus 116 n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~~-p~~l~~l~~~l~~---~~~~~~v~g~~~~~~~~~~~~~~~~~~~ 187 (329)
T 3ckj_A 116 RPGKGEALWRSLAA----SRGDIVVFVDSDLINPH-PMFVPWLVGPLLT---GDGVHLVKSFYRRPLNVGDAGGGAGATG 187 (329)
T ss_dssp CCSHHHHHHHHHHH----CCCSEEEECCTTEESCC-TTHHHHHHHHHHS---CSSCCEEEEEEECC--------------
T ss_pred CCCHHHHHHHHHHh----CCCCEEEEECCCCCCcC-hHHHHHHHHHHHh---CCCccEEEEEecccccCCcccccccccC
Confidence 36899999999999 89999999999999 77 9999999988653 4678888764332210 00 0001
Q ss_pred HHH-HHHHHHHHHH-Hhhcc-CCcccccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhH
Q 009677 135 DGR-FRSAYCVQWQ-GMDGL-KGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQ 211 (529)
Q Consensus 135 ~~~-~~~f~~~~~~-g~d~~-~~~~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (529)
.+. ...+...... ..... +...+.|+..++||+++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~rr~~l------------------------------------------ 225 (329)
T 3ckj_A 188 GGRVTELVARPLLAALRPELGCILQPLGGEYAATRELL------------------------------------------ 225 (329)
T ss_dssp -CHHHHHTHHHHHHHHCGGGGGCSCTTCSCEEEEHHHH------------------------------------------
T ss_pred CCceehhhHHHHHHHhhhhhccccCCCccceeeeHHHH------------------------------------------
Confidence 111 1111111111 11111 11223455568999998
Q ss_pred HhhccccccccccccccccccccCCCCccchHHHHHHHHh-CCCe-EEEeC-------CCCCceecccCCCHHHHHhhhh
Q 009677 212 EETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHC-KGWT-STYLT-------PFRPQFLGTSTTNLNDLLIQGT 282 (529)
Q Consensus 212 ~~a~~v~~c~ye~~t~wg~~iG~~~~svtED~~t~~~l~~-~Gwr-s~y~~-------~~~~~~~g~aP~~l~~~~~Qr~ 282 (529)
+++||+.+ -.||.++.+++.. .|++ +.+++ .......+.....+...+.||.
T Consensus 226 ------------------~~i~f~~~-~~~D~~l~~r~~~~~g~~~i~~v~~~~r~h~~s~~~~~~~m~~~i~~~~l~r~ 286 (329)
T 3ckj_A 226 ------------------TSVPFAPG-YGVEIGLLVDTFDRLGLDAIAQVNLGVREHRNRPLAELGAMSRQVIATLLSRC 286 (329)
T ss_dssp ------------------TTSCBCCG-GGHHHHHHHHHHHHHCGGGEEEEEEEECEECCCCGGGHHHHHHHHHHHHHHHT
T ss_pred ------------------HhCCCCCC-CcccHHHHHHHHHhcCCccEeeecceEEecCCCcHHHHHHHHHHHHHHHHHhc
Confidence 56776443 3599999999986 6775 44332 1011112233445566778999
Q ss_pred hhcccc
Q 009677 283 RWGSGL 288 (529)
Q Consensus 283 RWa~G~ 288 (529)
||..+.
T Consensus 287 ~~~~~~ 292 (329)
T 3ckj_A 287 GIPDSG 292 (329)
T ss_dssp TCCCCC
T ss_pred CCCCCc
Confidence 998884
No 10
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=98.78 E-value=1.1e-08 Score=114.56 Aligned_cols=67 Identities=15% Similarity=0.056 Sum_probs=52.0
Q ss_pred cCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEcc
Q 009677 45 EMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQF 121 (529)
Q Consensus 45 ~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~ 121 (529)
..|++.++..+ | .+.|++.|.|++.+-.-.++|||+.+|+|.+++ |++|.+.+.++.+ +++++.|..
T Consensus 238 ~~~~I~vI~~~-N-----~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~-pd~L~~ll~~l~~---~~~~~~vg~ 304 (657)
T 4fix_A 238 LGSRLSIHDQP-N-----LGGSGGYSRVMYEALKNTDCQQILFMDDDIRLE-PDSILRVLAMHRF---AKAPMLVGG 304 (657)
T ss_dssp HGGGEEEEECC-C-----CHHHHHHHHHHHHHHHHCCCSEEEEECSSEEEC-THHHHHHHHHHHH---BSSCCEEEE
T ss_pred cCCCEEEEECC-C-----CCHHHHHHHHHHHHHhcCCCCEEEEECCCCccC-hhHHHHHHHHHHh---CCCcEEEEe
Confidence 35799999754 4 588999999999831112679999999999998 9999999998864 455666653
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=98.71 E-value=1.5e-09 Score=122.56 Aligned_cols=169 Identities=9% Similarity=0.006 Sum_probs=0.0
Q ss_pred CCccccccceEEEEecCCCchhh--HHHhhhccC-CcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCC
Q 009677 15 YGNSQNHSTIIEIIQETFGESET--IRQADLVEM-PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCD 91 (529)
Q Consensus 15 ~~~~~~h~~~i~v~~~~~~~~~~--~~~~~~~~~-p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD 91 (529)
++..|+++..--|++||++++++ +++....+. +++.++..+++ .++++|.|.|++. ++||||+.+|+|
T Consensus 23 Sll~Qt~~~~EIIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~n-----~G~~~arN~gi~~----A~gdyI~flD~D 93 (729)
T 3l7i_A 23 SIKQQRTQDFNLIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDEN-----SGHAHARNIALEE----VETPYFMFLDAD 93 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhCCCCCeEEEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCCC-----CCHHHHHHHHHHh----ccCCEEEEECCC
Confidence 45667777543344555544432 344444443 48999987665 5799999999999 899999999999
Q ss_pred CCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHHHHHHHhhccCCc--ccccccceEecccc
Q 009677 92 MYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGP--VLSGTGYYIKRESL 169 (529)
Q Consensus 92 ~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~--~~~Gtg~v~RR~aL 169 (529)
.++. |++|.+.+..+.+ +++.+.... .+ +.+. ..+.......... ..+....... ...|.++++||+++
T Consensus 94 d~~~-p~~l~~l~~~l~~----~d~v~~~~~-~~-~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~rr~~l 164 (729)
T 3l7i_A 94 DELA-SYAITFYLEKFNN----TDGLIAPIH-SF-TTQR-PQFVDLDRVRVEY-FNAKENINSFLRKQSACNIIFRTAIV 164 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCC-hhHHHHHHHHhcC----CCEEEEeeE-Ee-ecCC-Cccccccceeeee-ecchhhHHHHhhccchhheeeeHHHH
Confidence 9997 9999999988863 444433321 11 1111 1111100100000 0011111111 23566789999998
Q ss_pred ccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccc--cCCC-CccchHHHH
Q 009677 170 YADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVG--ILYQ-SVSEDLFTG 246 (529)
Q Consensus 170 ~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG--~~~~-svtED~~t~ 246 (529)
+++| |+.+ ...||.+..
T Consensus 165 ------------------------------------------------------------~~~gl~fde~~~~~ED~d~~ 184 (729)
T 3l7i_A 165 ------------------------------------------------------------RAHHIRFNENLNTYVDWSFV 184 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------------HHcCCCcCCCCCcccCHHHH
Confidence 4554 6665 478999999
Q ss_pred HHHHhCCCeEEEeCC
Q 009677 247 FILHCKGWTSTYLTP 261 (529)
Q Consensus 247 ~~l~~~Gwrs~y~~~ 261 (529)
+++..+|+++.|+++
T Consensus 185 ~rl~~~g~~i~~~~~ 199 (729)
T 3l7i_A 185 LEYMKYVNKFVRIFN 199 (729)
T ss_dssp ---------------
T ss_pred HHHHHhcCCEEEecC
Confidence 999999999999943
No 12
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=98.64 E-value=3.2e-08 Score=99.90 Aligned_cols=135 Identities=11% Similarity=-0.012 Sum_probs=89.7
Q ss_pred CCcHHHHHHHH----HhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHH
Q 009677 63 HFKAGALNVLL----RVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRF 138 (529)
Q Consensus 63 ~~KAGaLN~~L----~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~ 138 (529)
-.||.++|.|+ +. ++||||+.+|+|.++. |+.+. +... .. |..+... .+.+.
T Consensus 111 f~~a~a~N~G~~~al~~----A~gd~i~flD~D~i~~-~d~~~----~~~~--~~--------p~~~~~~--~~~~~--- 166 (287)
T 2fy7_A 111 FNRAKLLNVGFQEALKD----YDYTCFVFSDVDLIPM-NDHNA----YRCF--SQ--------PRHISVA--MDKFG--- 166 (287)
T ss_dssp CCHHHHHHHHHHHHHHH----SCCCEEEEECTTEEES-BTTSC----CSCC--SS--------CEECCCE--EGGGT---
T ss_pred cchhhhhhhHHHHHHHh----CCCCEEEEECCCcccC-CCcce----EecC--CC--------CceEEEe--ecccc---
Confidence 35899999999 77 8999999999999998 78521 1111 11 2211100 01110
Q ss_pred HHHHHHHHHHhhccCCcccccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhcccc
Q 009677 139 RSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLA 218 (529)
Q Consensus 139 ~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~ 218 (529)
. ......+.|.+.++||+++
T Consensus 167 -----~------~~~~~~~~G~~~~~rr~~f------------------------------------------------- 186 (287)
T 2fy7_A 167 -----F------SLPYVQYFGGVSALSKQQF------------------------------------------------- 186 (287)
T ss_dssp -----T------SCSSTTCCCSEEEEEHHHH-------------------------------------------------
T ss_pred -----c------CCCcCceeeeEEEEEHHHH-------------------------------------------------
Confidence 0 0011235688889999998
Q ss_pred ccccccccccccccc-cCCCCc---cchHHHHHHHHhCCCeEEEeCCCC----------CceecccCCCHHHHHhhhhhh
Q 009677 219 SCSYEHQTKWGEEVG-ILYQSV---SEDLFTGFILHCKGWTSTYLTPFR----------PQFLGTSTTNLNDLLIQGTRW 284 (529)
Q Consensus 219 ~c~ye~~t~wg~~iG-~~~~sv---tED~~t~~~l~~~Gwrs~y~~~~~----------~~~~g~aP~~l~~~~~Qr~RW 284 (529)
++|| |+..-. .||.+.+.|++.+||+..+.++.. .......|+.+..+.+||.||
T Consensus 187 -----------~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~~~~ 255 (287)
T 2fy7_A 187 -----------LTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETM 255 (287)
T ss_dssp -----------HHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHHHHT
T ss_pred -----------HHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcccEE
Confidence 5776 776543 599999999999999877433210 111345799999999999999
Q ss_pred cccccccc
Q 009677 285 GSGLTDVG 292 (529)
Q Consensus 285 a~G~~qv~ 292 (529)
+++.++.+
T Consensus 256 ~~~Gl~~~ 263 (287)
T 2fy7_A 256 LSDGLNSL 263 (287)
T ss_dssp TTSSGGGC
T ss_pred cCCCcccC
Confidence 99999886
No 13
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=98.18 E-value=1.2e-06 Score=91.99 Aligned_cols=52 Identities=25% Similarity=0.266 Sum_probs=44.7
Q ss_pred CCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCC-CCCchHHHHHHhhhcCCCCCCceEEEcc
Q 009677 62 HHFKAGALNVLLRVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFHLDPKISSSLAFVQF 121 (529)
Q Consensus 62 ~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~-~~~p~~l~~~l~~f~d~~~~~~va~VQ~ 121 (529)
..+|++|+|.|++. ++||||+.+|||.. ++ |++|.+.+..+.+ +|++++|..
T Consensus 164 n~G~g~A~n~G~~~----A~gd~i~~lDaD~~~~~-p~~L~~l~~~l~~---~p~~d~v~G 216 (387)
T 3f1y_A 164 AHGKGDAMWRALSV----TRGDLVLYIDADTRDFR-PQLAYGVLGPVLE---VPGVRFVKA 216 (387)
T ss_dssp CCSHHHHHHHHTTT----CCSSEEEECCTTCSSCC-THHHHTTHHHHHH---STTCCEEEE
T ss_pred cCCHHHHHHHHHHh----cCCCEEEEEcCCCCcCC-HHHHHHHHHHHHH---CCCceEEEE
Confidence 36899999999999 89999999999999 76 9999999988864 456667755
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=97.57 E-value=0.00013 Score=71.21 Aligned_cols=52 Identities=6% Similarity=-0.075 Sum_probs=42.4
Q ss_pred CCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCC-CCCCceEEE
Q 009677 63 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP-KISSSLAFV 119 (529)
Q Consensus 63 ~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~-~~~~~va~V 119 (529)
.+.|.|+|.|++. ++|||++.+|+|.+++ |++|.+.+..+.+. ..+|+++.|
T Consensus 60 ~g~a~a~N~Gi~~----A~g~yl~fln~D~~~~-~~~l~~l~~~~~~~~~~~~~vg~v 112 (249)
T 2nxv_A 60 FHGFSWHKQMLPR----CKGRYVIFCHEDVELV-DRGYDDLVAAIEALEEADPKWLVA 112 (249)
T ss_dssp CCTTTHHHHHGGG----CCSSEEEEEETTEECS-SCCHHHHHHHHHHHHHHCTTEEEE
T ss_pred ccHHHHHHHHHHh----cCCCEEEEECCCcccC-ccHHHHHHHHHHhcccCCCCeeEE
Confidence 4678999999999 8999999999999997 99999998887620 002677765
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=97.17 E-value=0.003 Score=66.31 Aligned_cols=41 Identities=20% Similarity=0.040 Sum_probs=36.2
Q ss_pred CCcHHHHHHHH----HhcCCCCCCCEEEEeCCCCC-CCCchHHHHHHhhhc
Q 009677 63 HFKAGALNVLL----RVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFHL 108 (529)
Q Consensus 63 ~~KAGaLN~~L----~~s~~~s~g~~i~ilDaD~~-~~~p~~l~~~l~~f~ 108 (529)
.+|++|+|.|+ +. ++||+|+++|||.. .+ |+.+.+.+..+.
T Consensus 74 ~GkG~Al~~G~~~Al~~----a~gd~vv~mDADlq~~~-P~~i~~Ll~~l~ 119 (397)
T 2bo4_A 74 PGKGDGMNTALRYFLEE----TQWERIHFYDADITSFG-PDWITKAEEAAD 119 (397)
T ss_dssp SSHHHHHHHHHHHHHHH----CCCSEEEECCTTCSSCC-HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh----CCCCEEEEEcCCCCCCC-HHHHHHHHHHHH
Confidence 69999999999 77 89999999999996 44 999999887765
No 16
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=84.48 E-value=1.4 Score=45.95 Aligned_cols=37 Identities=22% Similarity=0.239 Sum_probs=31.7
Q ss_pred CCcHHHHHHHHHhcCCCC---CCCEEEEeCCCCCCCCchHHHHHHh
Q 009677 63 HFKAGALNVLLRVSGVIS---NSPYILGLDCDMYCNDPTSARQAMC 105 (529)
Q Consensus 63 ~~KAGaLN~~L~~s~~~s---~g~~i~ilDaD~~~~~p~~l~~~l~ 105 (529)
.+|..||-.++.. + ++|+|+.+|||-+. |..+.+.+.
T Consensus 143 ~GKG~Am~aGl~~----A~~~~gd~Vv~~DaDl~i--P~~v~~~~k 182 (394)
T 2zu9_A 143 SGKGEGMLVGLLL----AKAIGAEYVGFVDADNYI--PGAVNEYVK 182 (394)
T ss_dssp CSHHHHHHHHHHH----HHHTTCSEEEECCSCBSC--HHHHHHHHH
T ss_pred CChHHHHHHHHHH----HhhCCCCEEEEEeCCCCC--HHHHHHHHH
Confidence 5999999999998 6 89999999999953 888766554
No 17
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=80.93 E-value=5.4 Score=41.08 Aligned_cols=40 Identities=20% Similarity=0.223 Sum_probs=30.1
Q ss_pred CCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHH
Q 009677 62 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM 104 (529)
Q Consensus 62 ~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l 104 (529)
+.+|++++-.|+..+. +..++||..+|||.+.+ ....+.+
T Consensus 141 R~GKGegmi~Gi~~Ak-~~~geYVgFvDADdyi~--~~v~Eyv 180 (391)
T 2wvl_A 141 RSGKAEGMILALVFAA-LSGRRYVGFIDADNYFP--GAVWEYV 180 (391)
T ss_dssp CCSHHHHHHHHHHHHH-HTTCSEEEECCSCBSCH--HHHHHHH
T ss_pred cccchHHHHHHHHHHH-hcCCCEEEEEcCcCCCc--cCHHHHH
Confidence 4789999999998821 12899999999999984 4444433
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=80.72 E-value=2.9 Score=42.68 Aligned_cols=46 Identities=20% Similarity=0.130 Sum_probs=35.1
Q ss_pred HHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHH---HHHHhhhcCCCCCCceEEEc
Q 009677 67 GALNVLLRVSGVISNSPYILGLDCDMYCNDPTSA---RQAMCFHLDPKISSSLAFVQ 120 (529)
Q Consensus 67 GaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l---~~~l~~f~d~~~~~~va~VQ 120 (529)
.++|.+... .++|+++++|-|+++. |+|+ .+++..+.+ ++++..|-
T Consensus 89 ~al~~vf~~----~~~~~vIiLEDDl~~s-pdF~~y~~~~l~~y~~---D~~I~~IS 137 (343)
T 1fo8_A 89 WALGQIFHN----FNYPAAVVVEDDLEVA-PDFFEYFQATYPLLKA---DPSLWCVS 137 (343)
T ss_dssp HHHHHHHTT----SCCSEEEEEETTEEEC-TTHHHHHHHHHHHHHH---CTTEEEEE
T ss_pred HHHHHHHHh----ccCCEEEEEcCCCeEC-HHHHHHHHHHHHHhhc---CCcEEEEe
Confidence 366666665 6899999999999998 9997 455655553 67887774
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=68.93 E-value=10 Score=37.55 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=28.1
Q ss_pred CCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCC
Q 009677 62 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCND 96 (529)
Q Consensus 62 ~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~ 96 (529)
.-.||-.||.|...+. .+.|+++.=|.|.+|.|
T Consensus 96 ~FNRa~LlNvGf~ea~--~~~d~~ifHDVDLlP~d 128 (287)
T 3lw6_A 96 RFNRASLINVGFQFAS--DVYDYIAMHDVDLLPLN 128 (287)
T ss_dssp CCCHHHHHHHHHHHSC--TTCCEEEEECTTEEECC
T ss_pred ccchhheecccHHHHh--ccCCEEEEecccccccC
Confidence 3679999999999842 45799999999999986
No 20
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=43.44 E-value=41 Score=31.76 Aligned_cols=45 Identities=16% Similarity=0.180 Sum_probs=31.4
Q ss_pred cHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcC
Q 009677 65 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 109 (529)
Q Consensus 65 KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d 109 (529)
....+-+||+....-.+.++|++.|||+=.-+|+.+++.+..+.+
T Consensus 83 r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 83 RTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp HHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 356777788763200125899999999755558999998887754
No 21
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=42.49 E-value=45 Score=30.20 Aligned_cols=40 Identities=15% Similarity=0.086 Sum_probs=31.3
Q ss_pred CcHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCCchHHHHHHhhh
Q 009677 64 FKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFH 107 (529)
Q Consensus 64 ~KAGaLN~~L~~s~~~s~g~~i~ilDaD~-~~~~p~~l~~~l~~f 107 (529)
+-++++..|++.. .+.+.+++++||+ ..+ ++.+++.+..+
T Consensus 72 G~~~si~~al~~~---~~~~~vlv~~~D~P~i~-~~~i~~l~~~~ 112 (197)
T 3d5n_A 72 GISTSLKLGLRFF---KDYDAVLVALGDMPFVT-KEDVNKIINTF 112 (197)
T ss_dssp CHHHHHHHHHHHT---TTSSEEEEEETTCCCSC-HHHHHHHHHTC
T ss_pred CHHHHHHHHHHhh---ccCCcEEEEeCCccccC-HHHHHHHHHHh
Confidence 5678888898872 2348999999999 455 88898888766
No 22
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=38.24 E-value=53 Score=31.35 Aligned_cols=52 Identities=12% Similarity=0.034 Sum_probs=38.1
Q ss_pred cEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCch----HHHHHHhhhcC
Q 009677 48 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPT----SARQAMCFHLD 109 (529)
Q Consensus 48 ~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~----~l~~~l~~f~d 109 (529)
.+.|+..+. ..+-++++-.++.. .+.+.++++.||++.+ ++ .+++++..+.+
T Consensus 96 ~i~~~~~~~-----~~Gt~~al~~a~~~----l~~~~~lv~~~D~~~~-~~~~~~~l~~l~~~~~~ 151 (281)
T 3juk_A 96 CFSYVRQKQ-----MKGLGHAILTGEAL----IGNEPFAVILADDLCI-SHDHPSVLKQMTSLYQK 151 (281)
T ss_dssp EEEEEECSS-----CCCHHHHHHHTHHH----HCSSCEEEECTTEEEE-CTTSCCHHHHHHHHHHH
T ss_pred cEEEEecCC-----CCCcHHHHHHHHHH----cCCCCEEEEeCCeecc-CccchHHHHHHHHHHHH
Confidence 455654322 25778999999887 3446788999999776 78 78998888764
No 23
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=28.68 E-value=70 Score=31.15 Aligned_cols=27 Identities=26% Similarity=0.295 Sum_probs=23.1
Q ss_pred CCCCEEEEeCCCCCCCCchHHHHHHhhh
Q 009677 80 SNSPYILGLDCDMYCNDPTSARQAMCFH 107 (529)
Q Consensus 80 s~g~~i~ilDaD~~~~~p~~l~~~l~~f 107 (529)
.+.++++..|.|.+++ .+-|.+.+..+
T Consensus 92 ~~~~Wf~~~DDDtyv~-~~nL~~~L~~~ 118 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVN-PKALLQLLKTF 118 (280)
T ss_dssp HTCSEEEEEETTEEEC-HHHHHHHHTTS
T ss_pred CCCcEEEEeCCCcEEc-HHHHHHHHHhC
Confidence 5899999999999997 88888877654
No 24
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=28.19 E-value=60 Score=29.73 Aligned_cols=41 Identities=10% Similarity=0.028 Sum_probs=31.9
Q ss_pred CCcHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCCchHHHHHHhhhcC
Q 009677 63 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 109 (529)
Q Consensus 63 ~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~-~~~~p~~l~~~l~~f~d 109 (529)
.+.++.++ +++. .+.|.+++++||+ +.+ |+.+++++..+.+
T Consensus 72 ~g~~~~~~-~~~~----~~~~~vlv~~~D~P~~~-~~~i~~l~~~~~~ 113 (234)
T 2y6p_A 72 SGSDRVLY-VVRD----LDVDLIINYQGDEPFVY-EEDIKLIFRELEK 113 (234)
T ss_dssp SHHHHHHH-HHTT----CCCSEEEECCTTCCCCC-HHHHHHHHHHHHH
T ss_pred cchHHHHH-HHHh----CCCCEEEEecCCcCcCC-HHHHHHHHHHHHh
Confidence 56777774 5665 4678999999999 765 8899999887764
No 25
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=27.18 E-value=1.1e+02 Score=27.03 Aligned_cols=42 Identities=19% Similarity=0.059 Sum_probs=30.9
Q ss_pred CCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhh
Q 009677 63 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF 106 (529)
Q Consensus 63 ~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~ 106 (529)
.+-++++-.+++... .+.+.+++++||+-.-+++.+++++..
T Consensus 79 ~g~~~~i~~al~~~~--~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 79 RGCAASLRVALARVH--PRATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp -CCHHHHHHHHTTSC--TTEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHhc--ccCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 357888999988721 256899999999943337888888766
No 26
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=26.72 E-value=93 Score=28.10 Aligned_cols=41 Identities=10% Similarity=0.169 Sum_probs=31.8
Q ss_pred CcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhh
Q 009677 64 FKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 107 (529)
Q Consensus 64 ~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f 107 (529)
..++++..|++.. .+.+++++++||+-.-+++.+++++..+
T Consensus 78 ~~~~~i~~al~~~---~~~~~vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 78 DRTESVALALEAA---GDAEFVLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp SHHHHHHHHHTTC---TTCSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhc---CCCCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 3688899998872 2678999999999432378899888877
No 27
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=24.26 E-value=79 Score=28.69 Aligned_cols=39 Identities=15% Similarity=0.179 Sum_probs=31.7
Q ss_pred CCcHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCCchHHHHHHhh
Q 009677 63 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCF 106 (529)
Q Consensus 63 ~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~-~~~~p~~l~~~l~~ 106 (529)
.+-++++-.+++. .+.+.+++++||+ .++ ++.+++.+..
T Consensus 77 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~-~~~i~~l~~~ 116 (201)
T 1e5k_A 77 PGPLAGMLSVMQQ----EAGEWFLFCPCDTPYIP-PDLAARLNHQ 116 (201)
T ss_dssp CSHHHHHHHHHHH----CCSSEEEEEETTCTTCC-TTHHHHHHHT
T ss_pred CCHHHHHHHHHHh----CCCCcEEEEeCCcCcCC-HHHHHHHHhh
Confidence 3678889999998 5679999999999 455 7888887765
No 28
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=24.01 E-value=2.6e+02 Score=25.17 Aligned_cols=44 Identities=11% Similarity=-0.013 Sum_probs=32.4
Q ss_pred CCcHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCCchHHHHHHhhhcC
Q 009677 63 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 109 (529)
Q Consensus 63 ~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~-~~~~p~~l~~~l~~f~d 109 (529)
.+..+++-++++... .+.++++++|+|+ ... ++.+++.+..+.+
T Consensus 81 ~~~~~sv~~al~~~~--~~~~~vl~~d~d~P~~~-~~~i~~l~~~~~~ 125 (228)
T 2yc3_A 81 KERQDSVYSGLQEID--VNSELVCIHDSARPLVN-TEDVEKVLKDGSA 125 (228)
T ss_dssp SSHHHHHHHHHTTSC--TTCSEEEEEETTCTTCC-HHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhc--cCCCEEEEecCCCccCC-HHHHHHHHHHHHh
Confidence 356688888887622 2358999999997 444 7888888877753
No 29
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=23.52 E-value=56 Score=30.70 Aligned_cols=46 Identities=9% Similarity=-0.007 Sum_probs=32.4
Q ss_pred CcHHHHHHHHHhcCC---CCCCCEEEEeCCCCCCCCchHHHHHHhhhcC
Q 009677 64 FKAGALNVLLRVSGV---ISNSPYILGLDCDMYCNDPTSARQAMCFHLD 109 (529)
Q Consensus 64 ~KAGaLN~~L~~s~~---~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d 109 (529)
...+++-+|++.... ..+.++|+++|||+-.-+++.+++.+..+.+
T Consensus 84 ~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~ 132 (246)
T 3f1c_A 84 DRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALE 132 (246)
T ss_dssp SHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHh
Confidence 457777778776210 0136899999999843348999999887764
No 30
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=22.81 E-value=1.6e+02 Score=29.84 Aligned_cols=43 Identities=12% Similarity=0.010 Sum_probs=33.7
Q ss_pred CCcHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCCchHHHHHHhhhcC
Q 009677 63 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 109 (529)
Q Consensus 63 ~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~-~~~~p~~l~~~l~~f~d 109 (529)
.+-++++-++++.. .+.+.+++++||+ ... ++.+++++..+.+
T Consensus 83 ~g~~~~i~~~~~~~---~~~~~~lv~~~D~P~i~-~~~i~~l~~~~~~ 126 (459)
T 4fce_A 83 LGTGHAMQQAAPHF---ADDEDILMLYGDVPLIS-VDTLQRLLAAKPE 126 (459)
T ss_dssp CCHHHHHHHHGGGS---CTTSEEEEEETTCTTCC-HHHHHHHHHHCCT
T ss_pred CCcHHHHHHHHHhc---CCCCcEEEEeCCcccCC-HHHHHHHHHHHhh
Confidence 46688999998872 3468999999999 344 7889998887753
No 31
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=21.61 E-value=1.9e+02 Score=25.25 Aligned_cols=42 Identities=10% Similarity=-0.106 Sum_probs=31.6
Q ss_pred CCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhh
Q 009677 63 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF 106 (529)
Q Consensus 63 ~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~ 106 (529)
.+-++++..+++... .+.+.+++++||+-.-+++.+++++..
T Consensus 79 ~g~~~~i~~al~~~~--~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 79 LGCSSSLKSALTWVD--PTAEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp TTCCCHHHHHHHTSC--TTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhhh--ccCCeEEEEeCCcccCCHHHHHHHHhh
Confidence 356788999998721 256999999999975347888888766
Done!