Query 009678
Match_columns 529
No_of_seqs 292 out of 2910
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 10:36:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009678.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009678hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 100.0 2.3E-37 7.9E-42 312.8 39.1 417 58-509 1-425 (425)
2 1s3e_A Amine oxidase [flavin-c 100.0 4.2E-38 1.4E-42 325.9 33.0 429 56-514 3-457 (520)
3 2vvm_A Monoamine oxidase N; FA 100.0 3.7E-37 1.3E-41 317.3 27.8 430 57-518 39-492 (495)
4 2yg5_A Putrescine oxidase; oxi 100.0 1.9E-36 6.4E-41 308.6 25.5 426 57-511 5-451 (453)
5 3nrn_A Uncharacterized protein 100.0 1.5E-34 5.1E-39 291.5 38.9 400 58-507 1-403 (421)
6 3i6d_A Protoporphyrinogen oxid 100.0 1.5E-36 5.3E-41 311.0 23.7 421 57-511 5-468 (470)
7 2ivd_A PPO, PPOX, protoporphyr 100.0 8.3E-36 2.8E-40 306.0 29.2 420 55-515 14-477 (478)
8 4dgk_A Phytoene dehydrogenase; 100.0 5.8E-35 2E-39 301.5 33.5 435 57-517 1-497 (501)
9 3nks_A Protoporphyrinogen oxid 100.0 1.5E-35 5.3E-40 304.0 28.1 419 57-510 2-473 (477)
10 3lov_A Protoporphyrinogen oxid 100.0 1.2E-35 4E-40 304.5 22.4 424 57-514 4-468 (475)
11 1sez_A Protoporphyrinogen oxid 100.0 2.5E-35 8.6E-40 304.4 19.3 427 56-514 12-496 (504)
12 3k7m_X 6-hydroxy-L-nicotine ox 100.0 2.2E-31 7.4E-36 269.4 36.6 412 58-511 2-426 (431)
13 4gde_A UDP-galactopyranose mut 100.0 1.1E-33 3.6E-38 293.2 19.9 420 55-510 8-478 (513)
14 1b37_A Protein (polyamine oxid 100.0 3.8E-32 1.3E-36 277.8 24.8 422 56-513 3-460 (472)
15 2iid_A L-amino-acid oxidase; f 100.0 1.1E-31 3.6E-36 276.7 25.9 426 56-512 32-485 (498)
16 2jae_A L-amino acid oxidase; o 100.0 7.7E-32 2.6E-36 277.1 22.6 424 55-513 9-487 (489)
17 1rsg_A FMS1 protein; FAD bindi 100.0 5.7E-32 2E-36 279.3 19.4 421 56-514 7-510 (516)
18 4gut_A Lysine-specific histone 100.0 2.2E-31 7.6E-36 282.6 20.1 409 55-509 334-775 (776)
19 4dsg_A UDP-galactopyranose mut 100.0 5.3E-30 1.8E-34 261.2 21.8 414 56-508 8-452 (484)
20 2xag_A Lysine-specific histone 100.0 8.5E-29 2.9E-33 264.2 24.5 240 266-524 567-842 (852)
21 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 5.6E-28 1.9E-32 236.4 27.3 221 271-511 111-342 (342)
22 2z3y_A Lysine-specific histone 100.0 4.3E-28 1.5E-32 256.3 28.3 224 271-512 400-659 (662)
23 3ayj_A Pro-enzyme of L-phenyla 100.0 2.1E-28 7.2E-33 253.8 19.9 447 57-514 56-682 (721)
24 2b9w_A Putative aminooxidase; 99.9 1.4E-26 4.6E-31 233.7 22.5 405 56-508 5-423 (424)
25 1yvv_A Amine oxidase, flavin-c 99.9 2E-24 6.7E-29 210.9 25.0 325 57-513 2-329 (336)
26 2bcg_G Secretory pathway GDP d 99.9 2.3E-21 7.8E-26 196.2 29.2 388 55-508 9-438 (453)
27 1v0j_A UDP-galactopyranose mut 99.9 2.6E-23 9E-28 206.7 12.2 260 56-367 6-274 (399)
28 3p1w_A Rabgdi protein; GDI RAB 99.9 2.4E-21 8.3E-26 193.3 23.3 263 54-329 17-313 (475)
29 1d5t_A Guanine nucleotide diss 99.9 7.3E-20 2.5E-24 183.9 30.2 386 56-508 5-427 (433)
30 2bi7_A UDP-galactopyranose mut 99.9 3E-21 1E-25 190.6 19.0 251 57-364 3-260 (384)
31 1i8t_A UDP-galactopyranose mut 99.9 1.7E-21 5.9E-26 191.2 14.8 254 57-367 1-260 (367)
32 3hdq_A UDP-galactopyranose mut 99.8 4.1E-19 1.4E-23 173.9 19.3 260 54-369 26-290 (397)
33 1vg0_A RAB proteins geranylger 99.7 1.4E-14 4.9E-19 148.6 36.8 254 121-405 239-506 (650)
34 3kkj_A Amine oxidase, flavin-c 99.7 2.7E-15 9.3E-20 142.5 25.2 66 57-123 2-67 (336)
35 3dje_A Fructosyl amine: oxygen 99.7 1.3E-16 4.5E-21 161.2 16.6 60 271-331 160-222 (438)
36 2e1m_A L-glutamate oxidase; L- 99.7 1.2E-16 4.3E-21 155.0 15.4 80 55-134 42-131 (376)
37 1y56_B Sarcosine oxidase; dehy 99.7 7.5E-17 2.6E-21 160.0 12.6 205 271-511 148-356 (382)
38 2gag_B Heterotetrameric sarcos 99.7 6.8E-17 2.3E-21 161.6 12.3 202 271-511 173-376 (405)
39 3nyc_A D-arginine dehydrogenas 99.7 3.6E-17 1.2E-21 162.2 8.5 57 271-330 153-209 (381)
40 3dme_A Conserved exported prot 99.7 3E-16 1E-20 154.8 14.0 59 271-330 149-209 (369)
41 3ps9_A TRNA 5-methylaminomethy 99.7 6.1E-15 2.1E-19 156.7 21.8 58 271-330 416-473 (676)
42 3pvc_A TRNA 5-methylaminomethy 99.6 9.1E-15 3.1E-19 155.5 21.6 58 271-330 411-469 (689)
43 2gf3_A MSOX, monomeric sarcosi 99.6 3.5E-15 1.2E-19 148.3 16.7 205 271-511 149-365 (389)
44 1ryi_A Glycine oxidase; flavop 99.6 6.9E-14 2.4E-18 138.5 23.8 199 271-510 163-362 (382)
45 2oln_A NIKD protein; flavoprot 99.6 9E-15 3.1E-19 145.7 16.8 57 271-330 152-208 (397)
46 2uzz_A N-methyl-L-tryptophan o 99.6 6.4E-15 2.2E-19 145.4 11.7 62 271-336 148-209 (372)
47 3axb_A Putative oxidoreductase 99.6 1.8E-15 6.2E-20 153.3 7.7 59 271-330 180-254 (448)
48 3da1_A Glycerol-3-phosphate de 99.5 1E-12 3.5E-17 135.9 18.8 59 271-330 169-232 (561)
49 3oz2_A Digeranylgeranylglycero 99.5 5.2E-12 1.8E-16 125.5 22.7 39 57-95 4-42 (397)
50 2i0z_A NAD(FAD)-utilizing dehy 99.5 1.8E-13 6.1E-18 138.1 11.8 59 271-330 133-191 (447)
51 4at0_A 3-ketosteroid-delta4-5a 99.5 5.1E-13 1.7E-17 137.1 15.2 58 273-330 203-264 (510)
52 1y0p_A Fumarate reductase flav 99.4 2.6E-12 9E-17 133.7 17.0 60 271-330 254-317 (571)
53 1c0p_A D-amino acid oxidase; a 99.4 8.4E-12 2.9E-16 122.5 19.8 39 56-94 5-43 (363)
54 3nix_A Flavoprotein/dehydrogen 99.4 3.7E-12 1.3E-16 127.8 17.4 60 271-330 105-166 (421)
55 1pj5_A N,N-dimethylglycine oxi 99.4 6.2E-14 2.1E-18 152.4 3.9 58 271-330 150-207 (830)
56 3cgv_A Geranylgeranyl reductas 99.4 2.4E-11 8.1E-16 120.8 22.2 58 272-330 102-162 (397)
57 3rp8_A Flavoprotein monooxygen 99.4 3.7E-12 1.3E-16 127.1 15.9 54 272-329 127-180 (407)
58 3v76_A Flavoprotein; structura 99.4 9.1E-13 3.1E-17 130.9 11.3 57 271-330 131-187 (417)
59 1qo8_A Flavocytochrome C3 fuma 99.4 3.5E-12 1.2E-16 132.5 15.7 60 271-330 249-312 (566)
60 3ihg_A RDME; flavoenzyme, anth 99.4 3.3E-11 1.1E-15 124.6 22.1 63 272-335 120-189 (535)
61 3i3l_A Alkylhalidase CMLS; fla 99.4 2.2E-11 7.7E-16 126.1 20.0 58 272-330 128-188 (591)
62 3g3e_A D-amino-acid oxidase; F 99.3 1.3E-12 4.4E-17 127.7 8.8 192 271-513 141-336 (351)
63 2qcu_A Aerobic glycerol-3-phos 99.3 1E-10 3.6E-15 119.6 23.3 58 271-330 148-210 (501)
64 3fmw_A Oxygenase; mithramycin, 99.3 6.3E-11 2.2E-15 122.5 20.8 64 272-335 148-213 (570)
65 3nlc_A Uncharacterized protein 99.3 5.7E-12 1.9E-16 128.6 12.7 58 272-330 220-277 (549)
66 2rgh_A Alpha-glycerophosphate 99.3 1.3E-11 4.4E-16 127.9 13.8 60 271-331 187-251 (571)
67 2qa1_A PGAE, polyketide oxygen 99.3 3.8E-10 1.3E-14 115.1 24.2 61 273-335 107-171 (500)
68 2gmh_A Electron transfer flavo 99.3 2.5E-10 8.7E-15 118.6 22.9 59 272-330 144-217 (584)
69 2qa2_A CABE, polyketide oxygen 99.3 5.7E-10 2E-14 113.7 24.9 62 272-335 107-172 (499)
70 2gqf_A Hypothetical protein HI 99.3 3.1E-11 1.1E-15 119.4 13.0 59 271-331 108-169 (401)
71 3e1t_A Halogenase; flavoprotei 99.2 5.9E-10 2E-14 114.4 22.3 58 272-330 111-172 (512)
72 1d4d_A Flavocytochrome C fumar 99.2 9.7E-11 3.3E-15 121.6 16.0 59 272-330 255-317 (572)
73 2wdq_A Succinate dehydrogenase 99.2 9.9E-11 3.4E-15 121.6 15.8 59 272-330 143-206 (588)
74 3atr_A Conserved archaeal prot 99.2 2.1E-09 7E-14 108.7 24.4 58 272-330 100-162 (453)
75 1chu_A Protein (L-aspartate ox 99.2 7.5E-11 2.6E-15 121.2 12.7 60 271-330 137-208 (540)
76 2bs2_A Quinol-fumarate reducta 99.2 1.1E-10 3.6E-15 122.3 12.8 58 272-330 158-220 (660)
77 3c4n_A Uncharacterized protein 99.2 7.6E-12 2.6E-16 124.6 3.9 57 271-330 171-236 (405)
78 4hb9_A Similarities with proba 99.2 1.6E-09 5.3E-14 108.2 20.0 44 286-330 123-166 (412)
79 2dkh_A 3-hydroxybenzoate hydro 99.1 9E-09 3.1E-13 108.2 25.9 65 272-336 141-218 (639)
80 2weu_A Tryptophan 5-halogenase 99.1 8.4E-10 2.9E-14 113.4 17.4 59 271-330 172-230 (511)
81 2h88_A Succinate dehydrogenase 99.1 6.4E-10 2.2E-14 115.6 15.2 58 272-330 155-217 (621)
82 4ap3_A Steroid monooxygenase; 99.1 2E-10 7E-15 118.2 11.0 42 55-96 19-60 (549)
83 2x3n_A Probable FAD-dependent 99.1 2.6E-10 9E-15 113.3 11.5 64 271-335 106-172 (399)
84 2vou_A 2,6-dihydroxypyridine h 99.1 1.1E-09 3.8E-14 108.6 15.8 61 56-132 4-65 (397)
85 3gwf_A Cyclohexanone monooxyge 99.1 2.7E-10 9.2E-15 117.0 11.5 56 275-330 90-147 (540)
86 1rp0_A ARA6, thiazole biosynth 99.1 3.9E-10 1.3E-14 106.3 11.4 41 56-96 38-79 (284)
87 2aqj_A Tryptophan halogenase, 99.1 1.1E-09 3.7E-14 113.2 15.2 59 271-330 164-222 (538)
88 3alj_A 2-methyl-3-hydroxypyrid 99.1 8.2E-10 2.8E-14 108.9 13.5 54 272-330 107-160 (379)
89 1mo9_A ORF3; nucleotide bindin 99.1 2.2E-09 7.6E-14 110.3 15.7 58 272-329 255-315 (523)
90 4a9w_A Monooxygenase; baeyer-v 99.0 7.5E-10 2.6E-14 108.1 11.3 40 57-96 3-42 (357)
91 3k30_A Histamine dehydrogenase 99.0 3.5E-10 1.2E-14 120.2 9.5 45 54-98 388-432 (690)
92 2bry_A NEDD9 interacting prote 99.0 9.8E-10 3.3E-14 112.0 12.3 40 55-94 90-129 (497)
93 1kf6_A Fumarate reductase flav 99.0 1.4E-09 4.7E-14 113.2 13.5 58 272-330 134-197 (602)
94 3itj_A Thioredoxin reductase 1 99.0 4.3E-10 1.5E-14 109.0 9.0 45 54-98 19-67 (338)
95 3o0h_A Glutathione reductase; 99.0 3.2E-10 1.1E-14 115.5 8.4 56 272-329 232-287 (484)
96 3jsk_A Cypbp37 protein; octame 99.0 1.9E-09 6.4E-14 102.5 13.0 41 56-96 78-120 (344)
97 1k0i_A P-hydroxybenzoate hydro 99.0 6.9E-10 2.4E-14 110.1 10.6 62 273-335 104-169 (394)
98 1w4x_A Phenylacetone monooxyge 99.0 9.1E-10 3.1E-14 113.7 11.7 42 55-96 14-55 (542)
99 2zxi_A TRNA uridine 5-carboxym 99.0 1.3E-09 4.6E-14 111.5 12.3 59 273-333 124-183 (637)
100 3lxd_A FAD-dependent pyridine 99.0 3.2E-09 1.1E-13 105.9 14.9 58 271-329 193-250 (415)
101 2e4g_A Tryptophan halogenase; 99.0 5.1E-09 1.7E-13 108.3 16.6 59 271-330 193-252 (550)
102 2pyx_A Tryptophan halogenase; 99.0 5.5E-09 1.9E-13 107.5 16.5 59 271-330 174-233 (526)
103 3ces_A MNMG, tRNA uridine 5-ca 99.0 1.2E-09 4E-14 112.4 11.2 59 273-333 125-184 (651)
104 2e5v_A L-aspartate oxidase; ar 99.0 1.6E-09 5.5E-14 109.6 11.7 56 272-330 119-176 (472)
105 2cul_A Glucose-inhibited divis 99.0 2.8E-09 9.6E-14 97.2 12.2 56 273-330 69-125 (232)
106 3ab1_A Ferredoxin--NADP reduct 99.0 9.4E-10 3.2E-14 107.7 9.4 41 56-96 13-53 (360)
107 1jnr_A Adenylylsulfate reducta 99.0 2.2E-09 7.6E-14 112.7 12.7 59 272-330 151-218 (643)
108 3uox_A Otemo; baeyer-villiger 99.0 1.2E-09 4.1E-14 112.3 10.1 41 56-96 8-48 (545)
109 2gjc_A Thiazole biosynthetic e 99.0 3.3E-09 1.1E-13 100.2 12.1 41 56-96 64-106 (326)
110 3fg2_P Putative rubredoxin red 99.0 8E-10 2.7E-14 109.9 8.3 58 271-329 183-240 (404)
111 2zbw_A Thioredoxin reductase; 99.0 2.4E-09 8.1E-14 103.7 11.0 41 56-96 4-44 (335)
112 4fk1_A Putative thioredoxin re 98.9 5.5E-09 1.9E-13 99.6 12.9 38 56-94 5-42 (304)
113 4dna_A Probable glutathione re 98.9 6.6E-10 2.3E-14 112.6 6.7 57 272-330 211-268 (463)
114 3c96_A Flavin-containing monoo 98.9 3.6E-09 1.2E-13 105.5 11.8 37 57-93 4-41 (410)
115 3lzw_A Ferredoxin--NADP reduct 98.9 1.1E-09 3.9E-14 105.7 7.8 40 57-96 7-46 (332)
116 3d1c_A Flavin-containing putat 98.9 2.3E-09 7.9E-14 105.3 10.0 54 274-330 90-143 (369)
117 3f8d_A Thioredoxin reductase ( 98.9 4.8E-09 1.6E-13 100.8 10.8 39 56-96 14-52 (323)
118 3gyx_A Adenylylsulfate reducta 98.9 6.4E-09 2.2E-13 108.8 12.4 60 271-330 165-233 (662)
119 1fec_A Trypanothione reductase 98.9 1.4E-09 4.9E-14 110.7 7.3 58 272-330 231-288 (490)
120 2e1m_C L-glutamate oxidase; L- 98.9 2.8E-10 9.4E-15 98.7 1.2 101 410-514 49-155 (181)
121 3cp8_A TRNA uridine 5-carboxym 98.9 4.6E-09 1.6E-13 108.0 10.3 57 273-331 118-175 (641)
122 3r9u_A Thioredoxin reductase; 98.9 6.4E-09 2.2E-13 99.6 10.7 42 56-98 3-45 (315)
123 2xdo_A TETX2 protein; tetracyc 98.9 2.1E-09 7.2E-14 106.7 7.5 39 56-94 25-63 (398)
124 3ef6_A Toluene 1,2-dioxygenase 98.9 9.2E-10 3.1E-14 109.6 4.6 56 272-329 185-240 (410)
125 2ywl_A Thioredoxin reductase r 98.8 1.6E-08 5.5E-13 88.2 11.2 51 275-329 59-109 (180)
126 3oc4_A Oxidoreductase, pyridin 98.8 3E-09 1E-13 107.3 7.1 56 272-330 189-244 (452)
127 1pn0_A Phenol 2-monooxygenase; 98.8 5E-07 1.7E-11 95.2 23.9 61 56-132 7-72 (665)
128 3s5w_A L-ornithine 5-monooxyge 98.8 6.5E-09 2.2E-13 105.4 8.7 38 56-93 29-71 (463)
129 2r0c_A REBC; flavin adenine di 98.8 2E-08 6.7E-13 103.8 12.4 61 56-132 25-85 (549)
130 3iwa_A FAD-dependent pyridine 98.8 4E-08 1.4E-12 99.7 14.5 56 272-329 202-257 (472)
131 1ges_A Glutathione reductase; 98.8 2E-08 7E-13 101.1 11.9 56 273-329 209-264 (450)
132 1onf_A GR, grase, glutathione 98.8 2.8E-08 9.7E-13 101.4 12.9 58 272-330 217-275 (500)
133 3ics_A Coenzyme A-disulfide re 98.8 5.9E-08 2E-12 101.3 15.4 53 272-328 228-280 (588)
134 2wpf_A Trypanothione reductase 98.8 4.3E-09 1.5E-13 107.3 6.3 57 272-329 235-291 (495)
135 1y56_A Hypothetical protein PH 98.8 3E-08 1E-12 101.0 12.4 50 278-329 263-312 (493)
136 2gv8_A Monooxygenase; FMO, FAD 98.8 1.9E-08 6.4E-13 101.4 10.7 42 56-97 5-48 (447)
137 2hqm_A GR, grase, glutathione 98.8 7E-09 2.4E-13 105.4 7.6 58 272-329 226-284 (479)
138 2yqu_A 2-oxoglutarate dehydrog 98.8 2E-08 6.9E-13 101.4 10.9 57 272-330 208-264 (455)
139 2q7v_A Thioredoxin reductase; 98.8 2.3E-08 7.9E-13 96.2 10.7 40 56-96 7-46 (325)
140 1xdi_A RV3303C-LPDA; reductase 98.8 6.3E-09 2.1E-13 106.4 7.0 59 272-332 223-281 (499)
141 3dk9_A Grase, GR, glutathione 98.8 7.1E-09 2.4E-13 105.4 6.8 58 272-329 228-292 (478)
142 2q0l_A TRXR, thioredoxin reduc 98.8 1.2E-08 4E-13 97.6 7.9 38 58-96 2-40 (311)
143 3urh_A Dihydrolipoyl dehydroge 98.8 4.5E-08 1.5E-12 99.9 12.7 42 56-97 24-65 (491)
144 2r9z_A Glutathione amide reduc 98.8 3.6E-08 1.2E-12 99.6 11.8 55 273-329 208-263 (463)
145 1fl2_A Alkyl hydroperoxide red 98.8 2E-08 6.7E-13 96.0 9.4 52 278-329 62-114 (310)
146 3lad_A Dihydrolipoamide dehydr 98.7 5.4E-08 1.8E-12 98.9 12.2 41 56-96 2-42 (476)
147 3fbs_A Oxidoreductase; structu 98.7 4.3E-08 1.5E-12 92.9 10.8 34 57-90 2-35 (297)
148 1trb_A Thioredoxin reductase; 98.7 3.6E-08 1.2E-12 94.6 9.6 56 273-329 185-246 (320)
149 2xve_A Flavin-containing monoo 98.7 5.2E-08 1.8E-12 98.4 11.2 41 58-98 3-49 (464)
150 3dgh_A TRXR-1, thioredoxin red 98.7 8.8E-08 3E-12 97.5 12.8 57 272-329 227-288 (483)
151 1q1r_A Putidaredoxin reductase 98.7 2.1E-08 7.2E-13 100.3 8.0 58 272-329 191-249 (431)
152 1vdc_A NTR, NADPH dependent th 98.7 6.1E-08 2.1E-12 93.6 11.0 49 277-329 75-123 (333)
153 1dxl_A Dihydrolipoamide dehydr 98.7 8E-08 2.7E-12 97.5 12.2 43 55-97 4-46 (470)
154 3klj_A NAD(FAD)-dependent dehy 98.7 5.4E-08 1.8E-12 95.6 10.6 44 281-328 71-114 (385)
155 1hyu_A AHPF, alkyl hydroperoxi 98.7 4.8E-08 1.6E-12 100.2 10.5 52 278-329 273-325 (521)
156 2a87_A TRXR, TR, thioredoxin r 98.7 6.8E-08 2.3E-12 93.4 11.0 40 55-95 12-51 (335)
157 3h8l_A NADH oxidase; membrane 98.7 9.4E-08 3.2E-12 95.1 12.2 52 272-329 218-269 (409)
158 3ntd_A FAD-dependent pyridine 98.7 1.6E-07 5.4E-12 97.7 14.0 56 272-328 192-265 (565)
159 1v59_A Dihydrolipoamide dehydr 98.7 5.7E-08 2E-12 98.8 10.1 41 57-97 5-45 (478)
160 3qvp_A Glucose oxidase; oxidor 98.7 7.6E-08 2.6E-12 99.1 10.7 36 55-90 17-53 (583)
161 2qae_A Lipoamide, dihydrolipoy 98.6 1.2E-07 4.3E-12 96.0 11.8 41 57-97 2-42 (468)
162 3l8k_A Dihydrolipoyl dehydroge 98.6 1.3E-07 4.5E-12 95.6 11.4 41 57-97 4-44 (466)
163 1n4w_A CHOD, cholesterol oxida 98.6 1.8E-07 6.2E-12 95.4 12.4 62 273-334 222-292 (504)
164 4b1b_A TRXR, thioredoxin reduc 98.6 1.5E-07 5.1E-12 96.2 11.6 56 272-329 263-318 (542)
165 2cdu_A NADPH oxidase; flavoenz 98.6 1.7E-07 5.7E-12 94.6 11.8 57 272-330 191-247 (452)
166 1ojt_A Surface protein; redox- 98.6 1.6E-07 5.6E-12 95.4 11.6 42 56-97 5-46 (482)
167 1zmd_A Dihydrolipoyl dehydroge 98.6 2.1E-07 7.1E-12 94.5 12.0 42 56-97 5-46 (474)
168 3qfa_A Thioredoxin reductase 1 98.6 4.9E-07 1.7E-11 92.7 14.3 35 56-90 31-65 (519)
169 1ebd_A E3BD, dihydrolipoamide 98.6 2.1E-07 7.1E-12 94.0 11.2 39 57-96 3-41 (455)
170 3dgz_A Thioredoxin reductase 2 98.6 4.5E-07 1.5E-11 92.3 13.4 42 55-96 4-53 (488)
171 1coy_A Cholesterol oxidase; ox 98.5 4.8E-07 1.6E-11 92.3 12.6 62 273-334 227-297 (507)
172 1m6i_A Programmed cell death p 98.5 1.9E-07 6.6E-12 95.0 9.6 56 272-329 226-281 (493)
173 3fpz_A Thiazole biosynthetic e 98.5 3.7E-08 1.3E-12 94.8 3.9 42 56-97 64-107 (326)
174 2a8x_A Dihydrolipoyl dehydroge 98.5 3.5E-07 1.2E-11 92.6 11.2 39 57-96 3-41 (464)
175 3fim_B ARYL-alcohol oxidase; A 98.5 1.6E-07 5.4E-12 96.5 8.2 36 57-92 2-38 (566)
176 3h28_A Sulfide-quinone reducta 98.5 2.3E-07 7.8E-12 92.9 8.9 39 57-95 2-42 (430)
177 4eqs_A Coenzyme A disulfide re 98.5 8.6E-07 2.9E-11 88.7 13.0 53 271-329 187-239 (437)
178 4g6h_A Rotenone-insensitive NA 98.5 3.3E-06 1.1E-10 85.8 17.1 56 271-328 271-330 (502)
179 3q9t_A Choline dehydrogenase a 98.5 1.5E-07 5.1E-12 97.0 7.0 37 55-91 4-41 (577)
180 3vrd_B FCCB subunit, flavocyto 98.4 4.1E-08 1.4E-12 97.5 1.8 45 282-328 212-256 (401)
181 3t37_A Probable dehydrogenase; 98.4 3.6E-07 1.2E-11 94.1 8.9 36 56-91 16-52 (526)
182 4gcm_A TRXR, thioredoxin reduc 98.4 1.7E-07 5.8E-12 89.5 5.4 41 56-97 5-45 (312)
183 3cgb_A Pyridine nucleotide-dis 98.4 1.4E-06 4.8E-11 88.4 11.6 37 57-93 36-74 (480)
184 2v3a_A Rubredoxin reductase; a 98.4 1.1E-06 3.9E-11 86.4 10.5 50 278-329 193-242 (384)
185 3kd9_A Coenzyme A disulfide re 98.4 6.3E-07 2.1E-11 90.2 8.8 37 57-93 3-41 (449)
186 1nhp_A NADH peroxidase; oxidor 98.4 1.5E-06 5.2E-11 87.3 11.6 36 58-93 1-38 (447)
187 2jbv_A Choline oxidase; alcoho 98.4 1.9E-06 6.5E-11 88.7 12.3 38 56-93 12-50 (546)
188 1xhc_A NADH oxidase /nitrite r 98.4 1.2E-06 4.1E-11 85.5 10.1 34 57-91 8-41 (367)
189 4b63_A L-ornithine N5 monooxyg 98.4 7.2E-07 2.5E-11 90.9 8.6 42 54-95 36-77 (501)
190 2bc0_A NADH oxidase; flavoprot 98.3 1.3E-06 4.4E-11 88.9 9.8 36 57-92 35-73 (490)
191 3sx6_A Sulfide-quinone reducta 98.3 1.4E-06 4.7E-11 87.4 9.6 34 57-90 4-40 (437)
192 2gqw_A Ferredoxin reductase; f 98.3 5.5E-06 1.9E-10 82.1 13.4 46 278-329 193-238 (408)
193 3hyw_A Sulfide-quinone reducta 98.3 1.2E-06 4.1E-11 87.6 8.1 42 283-329 67-108 (430)
194 1o94_A Tmadh, trimethylamine d 98.3 6E-07 2.1E-11 95.8 5.7 44 55-98 387-430 (729)
195 4a5l_A Thioredoxin reductase; 98.2 6.3E-07 2.2E-11 85.6 4.9 36 56-91 3-38 (314)
196 2vdc_G Glutamate synthase [NAD 98.2 9.7E-07 3.3E-11 88.6 6.4 42 55-96 120-161 (456)
197 1nhp_A NADH peroxidase; oxidor 98.2 5E-06 1.7E-10 83.6 11.3 50 278-330 197-246 (447)
198 2bc0_A NADH oxidase; flavoprot 98.2 7.7E-06 2.6E-10 83.2 11.8 49 278-329 242-290 (490)
199 3cty_A Thioredoxin reductase; 98.2 9.9E-07 3.4E-11 84.4 4.9 41 56-97 15-55 (319)
200 1ps9_A 2,4-dienoyl-COA reducta 98.1 2.1E-06 7.3E-11 90.8 6.6 44 54-97 370-413 (671)
201 1v59_A Dihydrolipoamide dehydr 98.1 2E-05 6.7E-10 80.0 11.7 35 57-91 183-217 (478)
202 1zk7_A HGII, reductase, mercur 98.1 2.6E-06 9E-11 86.1 5.1 56 272-330 216-271 (467)
203 2eq6_A Pyruvate dehydrogenase 98.0 2.1E-05 7.1E-10 79.4 11.5 34 58-91 170-203 (464)
204 3pl8_A Pyranose 2-oxidase; sub 98.0 2.7E-06 9.1E-11 88.8 5.0 41 56-96 45-85 (623)
205 3c4a_A Probable tryptophan hyd 98.0 3.3E-06 1.1E-10 83.0 5.4 35 58-92 1-37 (381)
206 3ihm_A Styrene monooxygenase A 98.0 2.8E-06 9.7E-11 84.8 4.5 35 56-90 21-55 (430)
207 1lvl_A Dihydrolipoamide dehydr 98.0 2.8E-06 9.5E-11 85.7 3.8 41 56-97 4-44 (458)
208 3ic9_A Dihydrolipoamide dehydr 98.0 3.3E-06 1.1E-10 85.9 4.3 39 57-96 8-46 (492)
209 1zmd_A Dihydrolipoyl dehydroge 98.0 4.2E-05 1.4E-09 77.4 12.2 51 278-329 226-281 (474)
210 1ebd_A E3BD, dihydrolipoamide 98.0 3.2E-05 1.1E-09 77.9 11.0 35 57-91 170-204 (455)
211 3cgb_A Pyridine nucleotide-dis 98.0 3.9E-05 1.3E-09 77.8 11.4 50 278-330 233-282 (480)
212 1lvl_A Dihydrolipoamide dehydr 97.9 3.1E-05 1.1E-09 78.0 9.9 35 57-91 171-205 (458)
213 1zk7_A HGII, reductase, mercur 97.9 5.2E-05 1.8E-09 76.6 11.5 35 57-91 176-210 (467)
214 3g5s_A Methylenetetrahydrofola 97.9 1.1E-05 3.6E-10 77.2 5.7 39 58-96 2-40 (443)
215 1ojt_A Surface protein; redox- 97.9 3E-05 1E-09 78.7 9.4 51 278-330 232-286 (482)
216 2qae_A Lipoamide, dihydrolipoy 97.9 7.6E-05 2.6E-09 75.4 12.0 51 278-330 221-276 (468)
217 2eq6_A Pyruvate dehydrogenase 97.9 7.2E-06 2.5E-10 82.7 4.4 56 272-329 210-270 (464)
218 2a8x_A Dihydrolipoyl dehydroge 97.9 8.7E-05 3E-09 74.8 12.1 35 57-91 171-205 (464)
219 1xhc_A NADH oxidase /nitrite r 97.8 6.4E-05 2.2E-09 73.2 9.5 34 58-91 144-177 (367)
220 2gag_A Heterotetrameric sarcos 97.8 1.3E-05 4.5E-10 88.0 5.0 41 57-97 128-168 (965)
221 3lad_A Dihydrolipoamide dehydr 97.8 0.00013 4.5E-09 73.8 12.1 50 278-329 227-279 (476)
222 3ic9_A Dihydrolipoamide dehydr 97.8 0.00014 4.7E-09 73.9 12.0 35 57-91 174-208 (492)
223 1gte_A Dihydropyrimidine dehyd 97.8 1.7E-05 5.8E-10 87.7 5.6 41 56-96 186-227 (1025)
224 3urh_A Dihydrolipoyl dehydroge 97.8 0.00014 4.8E-09 73.9 11.9 34 57-90 198-231 (491)
225 1dxl_A Dihydrolipoamide dehydr 97.8 8.3E-05 2.9E-09 75.1 10.0 35 57-91 177-211 (470)
226 1lqt_A FPRA; NADP+ derivative, 97.7 1.7E-05 6E-10 79.5 4.4 40 57-96 3-49 (456)
227 1cjc_A Protein (adrenodoxin re 97.7 2.3E-05 8E-10 78.7 5.2 41 56-96 5-47 (460)
228 2x8g_A Thioredoxin glutathione 97.7 2E-05 6.9E-10 82.3 4.6 34 55-88 105-138 (598)
229 1kdg_A CDH, cellobiose dehydro 97.7 2.4E-05 8.2E-10 80.7 5.1 37 55-91 5-41 (546)
230 3s5w_A L-ornithine 5-monooxyge 97.6 0.00042 1.4E-08 69.8 13.0 36 56-91 226-263 (463)
231 2gqw_A Ferredoxin reductase; f 97.6 4.3E-05 1.5E-09 75.7 5.4 36 56-91 6-43 (408)
232 2e1m_B L-glutamate oxidase; L- 97.6 6.7E-05 2.3E-09 60.0 4.8 106 315-435 4-111 (130)
233 3kd9_A Coenzyme A disulfide re 97.6 0.00029 1E-08 70.6 10.7 34 57-90 148-181 (449)
234 2zbw_A Thioredoxin reductase; 97.5 0.00051 1.7E-08 65.8 11.5 34 57-90 152-185 (335)
235 3uox_A Otemo; baeyer-villiger 97.5 0.00074 2.5E-08 69.2 13.3 49 275-330 341-391 (545)
236 3dgz_A Thioredoxin reductase 2 97.5 0.00073 2.5E-08 68.5 12.9 51 278-329 231-286 (488)
237 2v3a_A Rubredoxin reductase; a 97.5 6.7E-05 2.3E-09 73.7 4.9 34 57-90 4-39 (384)
238 1ju2_A HydroxynitrIle lyase; f 97.5 4.2E-05 1.4E-09 78.4 3.5 37 55-92 24-60 (536)
239 3ab1_A Ferredoxin--NADP reduct 97.5 0.00041 1.4E-08 67.3 10.3 34 57-90 163-196 (360)
240 3gwf_A Cyclohexanone monooxyge 97.4 0.0017 5.8E-08 66.5 14.6 48 277-330 335-384 (540)
241 3d1c_A Flavin-containing putat 97.3 0.00055 1.9E-08 66.6 9.1 34 57-90 166-199 (369)
242 3cty_A Thioredoxin reductase; 97.3 0.0016 5.5E-08 61.8 11.8 33 57-89 155-187 (319)
243 2x8g_A Thioredoxin glutathione 97.2 0.0024 8.3E-08 66.4 12.8 32 58-89 287-318 (598)
244 1fl2_A Alkyl hydroperoxide red 97.2 0.0025 8.6E-08 60.1 11.9 33 57-89 144-176 (310)
245 3qfa_A Thioredoxin reductase 1 97.2 0.0023 8E-08 65.2 12.3 31 58-88 211-241 (519)
246 2q0l_A TRXR, thioredoxin reduc 97.2 0.0031 1.1E-07 59.5 12.0 34 57-90 143-176 (311)
247 4ap3_A Steroid monooxygenase; 97.1 0.0031 1.1E-07 64.6 12.7 36 56-91 190-225 (549)
248 1gpe_A Protein (glucose oxidas 97.1 0.00026 9E-09 73.3 4.6 37 56-92 23-60 (587)
249 1cjc_A Protein (adrenodoxin re 96.9 0.0056 1.9E-07 61.3 11.9 45 285-329 270-332 (460)
250 3l8k_A Dihydrolipoyl dehydroge 96.9 0.0033 1.1E-07 63.2 10.2 34 57-90 172-205 (466)
251 3fbs_A Oxidoreductase; structu 96.9 0.0036 1.2E-07 58.5 9.8 38 473-512 255-292 (297)
252 3f8d_A Thioredoxin reductase ( 96.9 0.0063 2.2E-07 57.6 11.4 33 57-89 154-186 (323)
253 4gcm_A TRXR, thioredoxin reduc 96.7 0.0015 5E-08 61.9 5.5 35 57-91 145-179 (312)
254 3klj_A NAD(FAD)-dependent dehy 96.7 0.00053 1.8E-08 67.1 2.1 38 57-94 146-183 (385)
255 1o94_A Tmadh, trimethylamine d 96.6 0.0046 1.6E-07 65.8 9.1 35 56-90 527-563 (729)
256 3lzw_A Ferredoxin--NADP reduct 96.6 0.0074 2.5E-07 57.4 9.4 33 57-89 154-186 (332)
257 3fwz_A Inner membrane protein 96.4 0.005 1.7E-07 50.4 5.9 37 55-91 5-41 (140)
258 2gag_A Heterotetrameric sarcos 96.4 0.012 4.1E-07 64.6 10.5 33 57-89 284-316 (965)
259 3ef6_A Toluene 1,2-dioxygenase 96.4 0.0032 1.1E-07 62.1 5.4 39 56-94 142-180 (410)
260 2g1u_A Hypothetical protein TM 96.3 0.005 1.7E-07 51.4 5.5 38 54-91 16-53 (155)
261 4a5l_A Thioredoxin reductase; 96.2 0.0018 6.2E-08 61.2 2.3 33 57-89 152-184 (314)
262 1lss_A TRK system potassium up 96.1 0.0062 2.1E-07 49.6 5.0 34 57-90 4-37 (140)
263 3llv_A Exopolyphosphatase-rela 95.8 0.0092 3.1E-07 48.8 5.0 34 57-90 6-39 (141)
264 3fg2_P Putative rubredoxin red 95.8 0.0068 2.3E-07 59.6 4.6 38 57-94 142-179 (404)
265 2cdu_A NADPH oxidase; flavoenz 95.8 0.0059 2E-07 61.1 4.1 37 57-93 149-185 (452)
266 3lxd_A FAD-dependent pyridine 95.7 0.0077 2.6E-07 59.5 4.5 38 57-94 152-189 (415)
267 3ic5_A Putative saccharopine d 95.6 0.011 3.7E-07 46.4 4.5 34 57-90 5-39 (118)
268 1q1r_A Putidaredoxin reductase 95.6 0.005 1.7E-07 61.1 3.0 37 57-93 149-185 (431)
269 2yqu_A 2-oxoglutarate dehydrog 95.6 0.011 3.7E-07 59.2 5.2 36 57-92 167-202 (455)
270 3oc4_A Oxidoreductase, pyridin 95.5 0.011 3.7E-07 59.1 5.0 37 57-93 147-183 (452)
271 3ado_A Lambda-crystallin; L-gu 95.5 0.013 4.3E-07 55.0 4.9 35 56-90 5-39 (319)
272 1id1_A Putative potassium chan 95.4 0.021 7E-07 47.5 5.4 33 57-89 3-35 (153)
273 4eqs_A Coenzyme A disulfide re 95.3 0.021 7.1E-07 56.7 6.3 59 57-132 147-205 (437)
274 1ges_A Glutathione reductase; 95.3 0.017 5.8E-07 57.7 5.6 37 57-93 167-203 (450)
275 2x5o_A UDP-N-acetylmuramoylala 95.2 0.015 5E-07 57.8 4.7 38 57-94 5-42 (439)
276 3ntd_A FAD-dependent pyridine 95.1 0.011 3.8E-07 61.0 3.8 37 57-93 151-187 (565)
277 2hmt_A YUAA protein; RCK, KTN, 95.1 0.023 7.9E-07 46.3 5.0 33 58-90 7-39 (144)
278 3lk7_A UDP-N-acetylmuramoylala 95.1 0.018 6.1E-07 57.4 4.9 35 56-90 8-42 (451)
279 2r9z_A Glutathione amide reduc 95.0 0.023 7.8E-07 57.0 5.6 37 57-93 166-202 (463)
280 3c85_A Putative glutathione-re 95.0 0.028 9.5E-07 48.2 5.4 35 56-90 38-73 (183)
281 1f0y_A HCDH, L-3-hydroxyacyl-C 94.7 0.032 1.1E-06 52.3 5.5 33 57-89 15-47 (302)
282 1pzg_A LDH, lactate dehydrogen 94.6 0.038 1.3E-06 52.4 5.5 35 56-90 8-43 (331)
283 3l4b_C TRKA K+ channel protien 94.6 0.026 9E-07 50.0 4.3 33 58-90 1-33 (218)
284 3iwa_A FAD-dependent pyridine 94.6 0.026 9.1E-07 56.7 4.7 37 57-93 159-196 (472)
285 2hqm_A GR, grase, glutathione 94.5 0.036 1.2E-06 55.8 5.6 37 57-93 185-221 (479)
286 3e8x_A Putative NAD-dependent 94.5 0.04 1.4E-06 49.4 5.2 35 56-90 20-55 (236)
287 3dfz_A SIRC, precorrin-2 dehyd 94.5 0.039 1.3E-06 48.7 4.9 34 56-89 30-63 (223)
288 1onf_A GR, grase, glutathione 94.4 0.033 1.1E-06 56.4 5.0 37 57-93 176-212 (500)
289 2dpo_A L-gulonate 3-dehydrogen 94.4 0.036 1.2E-06 52.2 4.9 34 57-90 6-39 (319)
290 1kyq_A Met8P, siroheme biosynt 94.4 0.028 9.5E-07 51.4 4.0 35 56-90 12-46 (274)
291 2xve_A Flavin-containing monoo 94.4 0.042 1.4E-06 55.0 5.6 37 56-92 196-232 (464)
292 2y0c_A BCEC, UDP-glucose dehyd 94.4 0.038 1.3E-06 55.3 5.2 35 56-90 7-41 (478)
293 2a9f_A Putative malic enzyme ( 94.4 0.037 1.3E-06 52.8 4.8 36 55-90 186-222 (398)
294 3i83_A 2-dehydropantoate 2-red 94.3 0.038 1.3E-06 52.3 5.0 33 58-90 3-35 (320)
295 3k6j_A Protein F01G10.3, confi 94.3 0.048 1.7E-06 53.8 5.7 36 56-91 53-88 (460)
296 4e12_A Diketoreductase; oxidor 94.3 0.036 1.2E-06 51.4 4.6 33 58-90 5-37 (283)
297 3vtf_A UDP-glucose 6-dehydroge 94.2 0.044 1.5E-06 53.7 5.1 37 54-90 18-54 (444)
298 3hn2_A 2-dehydropantoate 2-red 94.1 0.039 1.3E-06 52.0 4.4 33 58-90 3-35 (312)
299 4dio_A NAD(P) transhydrogenase 94.1 0.052 1.8E-06 52.4 5.3 35 56-90 189-223 (405)
300 4b1b_A TRXR, thioredoxin reduc 94.1 0.049 1.7E-06 55.5 5.3 35 58-92 224-258 (542)
301 2raf_A Putative dinucleotide-b 94.0 0.055 1.9E-06 47.5 5.1 36 56-91 18-53 (209)
302 1vdc_A NTR, NADPH dependent th 94.0 0.043 1.5E-06 52.1 4.7 36 56-91 158-193 (333)
303 3eag_A UDP-N-acetylmuramate:L- 94.0 0.052 1.8E-06 51.4 5.1 34 57-90 4-38 (326)
304 1vl6_A Malate oxidoreductase; 94.0 0.05 1.7E-06 51.9 4.8 34 56-89 191-225 (388)
305 1xdi_A RV3303C-LPDA; reductase 93.9 0.064 2.2E-06 54.3 6.0 37 57-93 182-218 (499)
306 2q7v_A Thioredoxin reductase; 93.9 0.049 1.7E-06 51.5 4.8 35 57-91 152-186 (325)
307 2a87_A TRXR, TR, thioredoxin r 93.9 0.049 1.7E-06 51.8 4.8 36 56-91 154-189 (335)
308 1trb_A Thioredoxin reductase; 93.8 0.05 1.7E-06 51.2 4.7 35 57-91 145-179 (320)
309 1ks9_A KPA reductase;, 2-dehyd 93.8 0.056 1.9E-06 50.2 5.0 33 58-90 1-33 (291)
310 1lld_A L-lactate dehydrogenase 93.8 0.057 2E-06 51.0 5.0 34 57-90 7-42 (319)
311 3dk9_A Grase, GR, glutathione 93.8 0.058 2E-06 54.2 5.3 37 57-93 187-223 (478)
312 1zej_A HBD-9, 3-hydroxyacyl-CO 93.8 0.053 1.8E-06 50.3 4.5 34 56-90 11-44 (293)
313 3p2y_A Alanine dehydrogenase/p 93.8 0.056 1.9E-06 51.7 4.8 35 56-90 183-217 (381)
314 2gv8_A Monooxygenase; FMO, FAD 93.7 0.054 1.9E-06 53.9 5.0 37 56-92 211-248 (447)
315 4a7p_A UDP-glucose dehydrogena 93.7 0.066 2.3E-06 52.8 5.4 36 56-91 7-42 (446)
316 2hjr_A Malate dehydrogenase; m 93.7 0.069 2.4E-06 50.5 5.3 34 57-90 14-48 (328)
317 3ghy_A Ketopantoate reductase 93.6 0.067 2.3E-06 50.9 5.2 33 57-89 3-35 (335)
318 3g17_A Similar to 2-dehydropan 93.6 0.054 1.8E-06 50.5 4.4 32 58-89 3-34 (294)
319 3gg2_A Sugar dehydrogenase, UD 93.6 0.059 2E-06 53.5 4.9 33 58-90 3-35 (450)
320 3g79_A NDP-N-acetyl-D-galactos 93.6 0.062 2.1E-06 53.5 4.9 36 56-91 17-54 (478)
321 3doj_A AT3G25530, dehydrogenas 93.6 0.079 2.7E-06 49.8 5.5 35 56-90 20-54 (310)
322 2wpf_A Trypanothione reductase 93.5 0.068 2.3E-06 54.0 5.3 37 57-93 191-230 (495)
323 3hwr_A 2-dehydropantoate 2-red 93.5 0.061 2.1E-06 50.8 4.6 33 56-89 18-50 (318)
324 2vdc_G Glutamate synthase [NAD 93.5 0.083 2.8E-06 52.6 5.8 43 473-517 407-449 (456)
325 1fec_A Trypanothione reductase 93.4 0.074 2.5E-06 53.6 5.3 37 57-93 187-226 (490)
326 3k96_A Glycerol-3-phosphate de 93.3 0.071 2.4E-06 51.1 4.8 34 56-89 28-61 (356)
327 2ew2_A 2-dehydropantoate 2-red 93.3 0.072 2.5E-06 50.1 4.9 32 58-89 4-35 (316)
328 3itj_A Thioredoxin reductase 1 93.3 0.069 2.4E-06 50.6 4.7 36 56-91 172-207 (338)
329 2v6b_A L-LDH, L-lactate dehydr 93.1 0.084 2.9E-06 49.4 4.9 33 58-90 1-35 (304)
330 1zcj_A Peroxisomal bifunctiona 93.1 0.085 2.9E-06 52.6 5.2 34 57-90 37-70 (463)
331 2ewd_A Lactate dehydrogenase,; 93.1 0.084 2.9E-06 49.8 4.8 34 57-90 4-38 (317)
332 3dtt_A NADP oxidoreductase; st 93.1 0.1 3.5E-06 47.1 5.2 35 56-90 18-52 (245)
333 1mo9_A ORF3; nucleotide bindin 93.0 0.084 2.9E-06 53.7 5.1 37 58-94 215-251 (523)
334 3pef_A 6-phosphogluconate dehy 93.0 0.096 3.3E-06 48.6 5.1 33 58-90 2-34 (287)
335 3ics_A Coenzyme A-disulfide re 93.0 0.095 3.2E-06 54.2 5.5 38 57-94 187-224 (588)
336 1t2d_A LDH-P, L-lactate dehydr 93.0 0.11 3.6E-06 49.1 5.3 33 57-89 4-37 (322)
337 3pid_A UDP-glucose 6-dehydroge 92.9 0.078 2.7E-06 51.9 4.4 35 55-90 34-68 (432)
338 2vns_A Metalloreductase steap3 92.9 0.11 3.9E-06 45.7 5.2 35 56-90 27-61 (215)
339 3ego_A Probable 2-dehydropanto 92.9 0.084 2.9E-06 49.5 4.5 33 57-90 2-34 (307)
340 1hyu_A AHPF, alkyl hydroperoxi 92.9 0.074 2.5E-06 54.1 4.4 35 57-91 355-389 (521)
341 1z82_A Glycerol-3-phosphate de 92.8 0.1 3.5E-06 49.6 5.0 34 56-89 13-46 (335)
342 3g0o_A 3-hydroxyisobutyrate de 92.8 0.11 3.6E-06 48.7 5.0 35 56-90 6-40 (303)
343 1mv8_A GMD, GDP-mannose 6-dehy 92.7 0.081 2.8E-06 52.4 4.4 33 58-90 1-33 (436)
344 1bg6_A N-(1-D-carboxylethyl)-L 92.6 0.11 3.8E-06 49.9 5.0 32 58-89 5-36 (359)
345 4dll_A 2-hydroxy-3-oxopropiona 92.6 0.11 3.6E-06 49.1 4.8 35 56-90 30-64 (320)
346 3mog_A Probable 3-hydroxybutyr 92.5 0.11 3.8E-06 51.9 5.0 34 57-90 5-38 (483)
347 3oj0_A Glutr, glutamyl-tRNA re 92.5 0.055 1.9E-06 44.3 2.3 34 57-90 21-54 (144)
348 1x13_A NAD(P) transhydrogenase 92.5 0.13 4.3E-06 50.2 5.2 35 56-90 171-205 (401)
349 1guz_A Malate dehydrogenase; o 92.3 0.13 4.5E-06 48.2 5.0 33 58-90 1-35 (310)
350 3tl2_A Malate dehydrogenase; c 92.3 0.14 4.8E-06 47.9 5.1 33 57-89 8-41 (315)
351 1txg_A Glycerol-3-phosphate de 92.3 0.11 3.6E-06 49.5 4.4 31 58-88 1-31 (335)
352 3r9u_A Thioredoxin reductase; 92.2 0.13 4.4E-06 48.2 4.9 35 57-91 147-181 (315)
353 3l9w_A Glutathione-regulated p 92.2 0.14 4.8E-06 50.0 5.2 36 56-91 3-38 (413)
354 3dgh_A TRXR-1, thioredoxin red 92.2 0.17 5.7E-06 50.9 6.0 33 57-89 187-219 (483)
355 3qha_A Putative oxidoreductase 92.2 0.1 3.6E-06 48.6 4.1 35 57-91 15-49 (296)
356 3gvi_A Malate dehydrogenase; N 92.1 0.16 5.5E-06 47.7 5.3 35 56-90 6-41 (324)
357 1dlj_A UDP-glucose dehydrogena 92.1 0.1 3.5E-06 51.0 4.1 32 58-90 1-32 (402)
358 1jw9_B Molybdopterin biosynthe 92.1 0.13 4.3E-06 46.6 4.4 34 57-90 31-65 (249)
359 1ur5_A Malate dehydrogenase; o 92.1 0.15 5.3E-06 47.7 5.1 32 58-89 3-35 (309)
360 1nyt_A Shikimate 5-dehydrogena 92.0 0.16 5.5E-06 46.6 5.1 34 56-89 118-151 (271)
361 3pdu_A 3-hydroxyisobutyrate de 92.0 0.12 4E-06 48.0 4.3 33 58-90 2-34 (287)
362 1jay_A Coenzyme F420H2:NADP+ o 91.9 0.15 5.3E-06 44.6 4.7 31 59-89 2-33 (212)
363 2h78_A Hibadh, 3-hydroxyisobut 91.9 0.14 4.7E-06 47.9 4.6 34 57-90 3-36 (302)
364 4dna_A Probable glutathione re 91.8 0.16 5.5E-06 50.7 5.3 36 57-92 170-205 (463)
365 4g65_A TRK system potassium up 91.8 0.065 2.2E-06 53.3 2.4 35 57-91 3-37 (461)
366 3o0h_A Glutathione reductase; 91.8 0.17 5.6E-06 51.0 5.3 37 57-93 191-227 (484)
367 1l7d_A Nicotinamide nucleotide 91.8 0.17 5.9E-06 49.0 5.3 35 56-90 171-205 (384)
368 3ldh_A Lactate dehydrogenase; 91.7 0.23 7.9E-06 46.6 5.9 34 56-89 20-55 (330)
369 1pjc_A Protein (L-alanine dehy 91.7 0.18 6.2E-06 48.4 5.3 34 57-90 167-200 (361)
370 1y6j_A L-lactate dehydrogenase 91.7 0.16 5.4E-06 47.8 4.7 33 57-89 7-41 (318)
371 1a5z_A L-lactate dehydrogenase 91.6 0.14 4.9E-06 48.2 4.4 32 58-89 1-34 (319)
372 3l6d_A Putative oxidoreductase 91.6 0.25 8.6E-06 46.2 6.1 35 56-90 8-42 (306)
373 4e21_A 6-phosphogluconate dehy 91.6 0.18 6E-06 48.3 5.0 35 56-90 21-55 (358)
374 3phh_A Shikimate dehydrogenase 91.6 0.2 6.9E-06 45.6 5.1 33 57-89 118-150 (269)
375 4ffl_A PYLC; amino acid, biosy 91.5 0.2 6.8E-06 48.2 5.5 34 58-91 2-35 (363)
376 1oju_A MDH, malate dehydrogena 91.5 0.14 4.9E-06 47.4 4.1 33 58-90 1-35 (294)
377 4huj_A Uncharacterized protein 91.4 0.11 3.9E-06 45.9 3.3 33 57-89 23-56 (220)
378 3dfu_A Uncharacterized protein 91.4 0.062 2.1E-06 47.7 1.5 34 56-89 5-38 (232)
379 2wtb_A MFP2, fatty acid multif 91.4 0.18 6.3E-06 53.2 5.3 34 57-90 312-345 (725)
380 4ezb_A Uncharacterized conserv 91.3 0.18 6E-06 47.5 4.7 34 57-90 24-58 (317)
381 2i6t_A Ubiquitin-conjugating e 91.3 0.18 6E-06 47.0 4.6 34 57-90 14-49 (303)
382 1evy_A Glycerol-3-phosphate de 91.3 0.14 4.7E-06 49.4 4.0 31 59-89 17-47 (366)
383 3p7m_A Malate dehydrogenase; p 91.2 0.23 7.9E-06 46.6 5.3 34 57-90 5-39 (321)
384 3qsg_A NAD-binding phosphogluc 91.2 0.17 5.8E-06 47.5 4.4 34 56-89 23-57 (312)
385 2eez_A Alanine dehydrogenase; 91.2 0.22 7.6E-06 48.0 5.3 34 57-90 166-199 (369)
386 2o3j_A UDP-glucose 6-dehydroge 91.2 0.18 6.2E-06 50.5 4.8 34 57-90 9-44 (481)
387 1p77_A Shikimate 5-dehydrogena 91.1 0.17 5.8E-06 46.4 4.2 34 56-89 118-151 (272)
388 1hyh_A L-hicdh, L-2-hydroxyiso 91.1 0.17 5.9E-06 47.4 4.4 32 58-89 2-35 (309)
389 2uyy_A N-PAC protein; long-cha 91.1 0.28 9.4E-06 46.1 5.8 34 57-90 30-63 (316)
390 2qrj_A Saccharopine dehydrogen 91.1 0.2 6.9E-06 48.0 4.8 40 56-95 213-257 (394)
391 3gpi_A NAD-dependent epimerase 91.0 0.26 9E-06 45.4 5.5 34 57-90 3-36 (286)
392 3pqe_A L-LDH, L-lactate dehydr 91.0 0.21 7.3E-06 47.0 4.8 33 57-89 5-39 (326)
393 1pjq_A CYSG, siroheme synthase 90.9 0.19 6.6E-06 49.9 4.8 33 57-89 12-44 (457)
394 2qyt_A 2-dehydropantoate 2-red 90.9 0.14 4.8E-06 48.2 3.6 32 57-88 8-45 (317)
395 3ius_A Uncharacterized conserv 90.9 0.21 7.2E-06 46.0 4.8 34 57-90 5-38 (286)
396 2egg_A AROE, shikimate 5-dehyd 90.9 0.22 7.6E-06 46.3 4.8 34 56-89 140-174 (297)
397 3ew7_A LMO0794 protein; Q8Y8U8 90.8 0.26 9E-06 43.2 5.1 32 58-89 1-33 (221)
398 2f1k_A Prephenate dehydrogenas 90.7 0.24 8.1E-06 45.6 4.9 32 58-89 1-32 (279)
399 3nep_X Malate dehydrogenase; h 90.7 0.21 7.3E-06 46.7 4.5 33 58-90 1-35 (314)
400 1m6i_A Programmed cell death p 90.7 0.22 7.4E-06 50.2 4.9 36 57-92 180-219 (493)
401 4aj2_A L-lactate dehydrogenase 90.7 0.29 9.8E-06 46.1 5.4 34 56-89 18-53 (331)
402 2pv7_A T-protein [includes: ch 90.6 0.26 9E-06 45.8 5.2 34 57-90 21-55 (298)
403 1yqg_A Pyrroline-5-carboxylate 90.6 0.21 7.3E-06 45.4 4.5 32 58-89 1-33 (263)
404 4a9w_A Monooxygenase; baeyer-v 90.6 0.19 6.6E-06 47.8 4.4 33 56-89 162-194 (357)
405 3ggo_A Prephenate dehydrogenas 90.5 0.25 8.7E-06 46.3 5.0 35 56-90 32-68 (314)
406 2vhw_A Alanine dehydrogenase; 90.5 0.28 9.4E-06 47.4 5.3 35 56-90 167-201 (377)
407 3h2s_A Putative NADH-flavin re 90.5 0.28 9.6E-06 43.2 5.0 32 58-89 1-33 (224)
408 3ktd_A Prephenate dehydrogenas 90.3 0.31 1.1E-05 46.1 5.4 35 56-90 7-41 (341)
409 2zyd_A 6-phosphogluconate dehy 90.3 0.22 7.6E-06 49.7 4.5 35 56-90 14-48 (480)
410 4gwg_A 6-phosphogluconate dehy 90.3 0.27 9.3E-06 48.9 5.1 35 56-90 3-37 (484)
411 1kdg_A CDH, cellobiose dehydro 90.2 0.33 1.1E-05 49.5 5.9 58 276-334 199-265 (546)
412 3zwc_A Peroxisomal bifunctiona 90.1 0.32 1.1E-05 51.2 5.7 35 56-90 315-349 (742)
413 1wdk_A Fatty oxidation complex 90.1 0.23 8E-06 52.3 4.7 34 57-90 314-347 (715)
414 2gf2_A Hibadh, 3-hydroxyisobut 90.1 0.26 8.9E-06 45.8 4.6 32 59-90 2-33 (296)
415 3h8v_A Ubiquitin-like modifier 90.1 0.23 7.8E-06 45.8 4.1 35 56-90 35-70 (292)
416 2q3e_A UDP-glucose 6-dehydroge 90.1 0.22 7.6E-06 49.7 4.3 34 57-90 5-40 (467)
417 1edz_A 5,10-methylenetetrahydr 90.1 0.25 8.4E-06 46.1 4.3 34 56-89 176-210 (320)
418 2p4q_A 6-phosphogluconate dehy 90.0 0.32 1.1E-05 48.8 5.4 35 56-90 9-43 (497)
419 1yj8_A Glycerol-3-phosphate de 89.9 0.21 7.1E-06 48.3 3.9 34 58-91 22-62 (375)
420 3ojo_A CAP5O; rossmann fold, c 89.9 0.23 8E-06 48.6 4.2 35 57-91 11-45 (431)
421 3don_A Shikimate dehydrogenase 89.9 0.28 9.4E-06 45.0 4.5 35 56-90 116-151 (277)
422 3rui_A Ubiquitin-like modifier 89.9 0.33 1.1E-05 45.7 5.0 36 56-91 33-69 (340)
423 3fi9_A Malate dehydrogenase; s 89.8 0.35 1.2E-05 45.8 5.2 34 56-89 7-43 (343)
424 3cky_A 2-hydroxymethyl glutara 89.8 0.27 9.3E-06 45.8 4.5 33 57-89 4-36 (301)
425 3c24_A Putative oxidoreductase 89.8 0.31 1.1E-05 45.1 4.8 34 57-90 11-45 (286)
426 1gte_A Dihydropyrimidine dehyd 89.8 0.25 8.6E-06 54.6 4.9 33 58-90 333-366 (1025)
427 3vku_A L-LDH, L-lactate dehydr 89.8 0.3 1E-05 45.8 4.7 34 56-89 8-43 (326)
428 2zqz_A L-LDH, L-lactate dehydr 89.7 0.32 1.1E-05 45.8 4.9 35 55-89 7-43 (326)
429 1vpd_A Tartronate semialdehyde 89.7 0.27 9.1E-06 45.8 4.4 32 58-89 6-37 (299)
430 2hk9_A Shikimate dehydrogenase 89.6 0.28 9.7E-06 45.0 4.4 34 56-89 128-161 (275)
431 2g5c_A Prephenate dehydrogenas 89.6 0.34 1.1E-05 44.6 4.9 32 58-89 2-35 (281)
432 2rir_A Dipicolinate synthase, 89.6 0.37 1.3E-05 44.9 5.2 35 56-90 156-190 (300)
433 1lqt_A FPRA; NADP+ derivative, 89.6 0.3 1E-05 48.6 4.8 36 56-91 146-202 (456)
434 1x0v_A GPD-C, GPDH-C, glycerol 89.5 0.18 6.3E-06 48.2 3.2 34 58-91 9-49 (354)
435 3tnl_A Shikimate dehydrogenase 89.5 0.4 1.4E-05 44.8 5.2 34 56-89 153-187 (315)
436 2pgd_A 6-phosphogluconate dehy 89.5 0.32 1.1E-05 48.7 4.9 33 58-90 3-35 (482)
437 1pgj_A 6PGDH, 6-PGDH, 6-phosph 89.4 0.31 1.1E-05 48.7 4.9 33 58-90 2-34 (478)
438 1zud_1 Adenylyltransferase THI 89.4 0.32 1.1E-05 43.9 4.5 35 56-90 27-62 (251)
439 3u62_A Shikimate dehydrogenase 89.4 0.41 1.4E-05 43.2 5.2 34 56-90 108-142 (253)
440 2aef_A Calcium-gated potassium 89.4 0.17 5.9E-06 45.2 2.7 35 56-91 8-42 (234)
441 3d4o_A Dipicolinate synthase s 89.4 0.4 1.4E-05 44.4 5.3 35 56-90 154-188 (293)
442 3c7a_A Octopine dehydrogenase; 89.3 0.18 6.2E-06 49.3 3.0 30 58-87 3-33 (404)
443 3fbt_A Chorismate mutase and s 89.3 0.36 1.2E-05 44.3 4.8 35 56-90 121-156 (282)
444 2x0j_A Malate dehydrogenase; o 89.3 0.3 1E-05 45.1 4.3 32 58-89 1-34 (294)
445 1hdo_A Biliverdin IX beta redu 89.3 0.42 1.4E-05 41.3 5.1 33 58-90 4-37 (206)
446 3pwz_A Shikimate dehydrogenase 89.3 0.41 1.4E-05 43.7 5.1 34 56-89 119-153 (272)
447 2dvm_A Malic enzyme, 439AA lon 89.2 0.37 1.3E-05 47.1 5.0 32 56-87 185-219 (439)
448 2rcy_A Pyrroline carboxylate r 89.2 0.31 1.1E-05 44.3 4.4 35 57-91 4-42 (262)
449 2izz_A Pyrroline-5-carboxylate 89.2 0.35 1.2E-05 45.5 4.8 34 56-89 21-58 (322)
450 3jyo_A Quinate/shikimate dehyd 89.2 0.42 1.4E-05 44.0 5.1 34 56-89 126-160 (283)
451 1nvt_A Shikimate 5'-dehydrogen 89.1 0.3 1E-05 45.1 4.2 32 57-89 128-159 (287)
452 1ldn_A L-lactate dehydrogenase 89.0 0.4 1.4E-05 45.0 5.0 34 56-89 5-40 (316)
453 3gt0_A Pyrroline-5-carboxylate 89.0 0.44 1.5E-05 42.9 5.1 33 58-90 3-39 (247)
454 1w4x_A Phenylacetone monooxyge 89.0 0.31 1E-05 49.8 4.5 35 56-90 185-219 (542)
455 3k30_A Histamine dehydrogenase 89.0 0.41 1.4E-05 50.5 5.6 37 56-92 522-560 (690)
456 4id9_A Short-chain dehydrogena 89.0 0.4 1.4E-05 45.6 5.1 37 55-91 17-54 (347)
457 2cvz_A Dehydrogenase, 3-hydrox 88.9 0.31 1.1E-05 45.1 4.2 31 58-89 2-32 (289)
458 4b4o_A Epimerase family protei 88.9 0.47 1.6E-05 44.0 5.4 32 58-89 1-33 (298)
459 3d0o_A L-LDH 1, L-lactate dehy 88.9 0.36 1.2E-05 45.3 4.6 33 57-89 6-40 (317)
460 3ond_A Adenosylhomocysteinase; 88.9 0.38 1.3E-05 47.5 4.9 35 56-90 264-298 (488)
461 3o8q_A Shikimate 5-dehydrogena 88.8 0.43 1.5E-05 43.8 5.0 34 56-89 125-159 (281)
462 2ahr_A Putative pyrroline carb 88.7 0.36 1.2E-05 43.8 4.4 33 57-89 3-35 (259)
463 1i36_A Conserved hypothetical 88.6 0.35 1.2E-05 44.0 4.2 30 59-88 2-31 (264)
464 1ez4_A Lactate dehydrogenase; 88.6 0.37 1.3E-05 45.2 4.4 34 56-89 4-39 (318)
465 4g6h_A Rotenone-insensitive NA 88.5 0.29 1E-05 49.3 3.9 37 58-94 218-268 (502)
466 3tri_A Pyrroline-5-carboxylate 88.4 0.52 1.8E-05 43.3 5.3 34 57-90 3-39 (280)
467 1mld_A Malate dehydrogenase; o 88.3 0.37 1.3E-05 45.1 4.3 33 58-90 1-36 (314)
468 3t4e_A Quinate/shikimate dehyd 88.3 0.55 1.9E-05 43.8 5.3 34 56-89 147-181 (312)
469 1np3_A Ketol-acid reductoisome 88.3 0.5 1.7E-05 44.8 5.2 34 57-90 16-49 (338)
470 4hv4_A UDP-N-acetylmuramate--L 88.3 0.32 1.1E-05 48.9 4.0 35 56-90 21-56 (494)
471 1a4i_A Methylenetetrahydrofola 88.2 0.5 1.7E-05 43.3 4.8 34 56-89 164-198 (301)
472 4a26_A Putative C-1-tetrahydro 88.1 0.51 1.7E-05 43.3 4.8 34 56-89 164-198 (300)
473 2d5c_A AROE, shikimate 5-dehyd 88.0 0.54 1.9E-05 42.7 5.1 31 59-89 118-148 (263)
474 3d1l_A Putative NADP oxidoredu 88.0 0.45 1.5E-05 43.4 4.6 34 57-90 10-44 (266)
475 1yb4_A Tartronic semialdehyde 88.0 0.29 1E-05 45.4 3.3 32 58-90 4-35 (295)
476 3dhn_A NAD-dependent epimerase 87.8 0.44 1.5E-05 42.0 4.3 34 57-90 4-38 (227)
477 3vps_A TUNA, NAD-dependent epi 87.7 0.6 2.1E-05 43.6 5.4 36 56-91 6-42 (321)
478 1lu9_A Methylene tetrahydromet 87.7 0.6 2.1E-05 43.1 5.3 34 56-89 118-152 (287)
479 3nv9_A Malic enzyme; rossmann 87.7 0.47 1.6E-05 46.0 4.5 36 56-91 218-256 (487)
480 3h5n_A MCCB protein; ubiquitin 87.7 0.49 1.7E-05 45.1 4.7 34 56-89 117-151 (353)
481 2d4a_B Malate dehydrogenase; a 87.6 0.48 1.6E-05 44.2 4.5 31 59-89 1-32 (308)
482 1leh_A Leucine dehydrogenase; 87.6 0.59 2E-05 44.6 5.1 34 56-89 172-205 (364)
483 1npy_A Hypothetical shikimate 87.5 0.55 1.9E-05 42.9 4.7 33 57-89 119-152 (271)
484 2pzm_A Putative nucleotide sug 87.5 0.69 2.4E-05 43.6 5.7 35 56-90 19-54 (330)
485 3hyw_A Sulfide-quinone reducta 87.4 0.35 1.2E-05 47.7 3.7 52 273-328 201-254 (430)
486 3ngx_A Bifunctional protein fo 87.4 0.56 1.9E-05 42.4 4.6 34 56-89 149-183 (276)
487 4gbj_A 6-phosphogluconate dehy 87.4 0.42 1.4E-05 44.4 4.0 34 57-90 5-38 (297)
488 3dqp_A Oxidoreductase YLBE; al 87.3 0.53 1.8E-05 41.3 4.4 33 58-90 1-34 (219)
489 2iz1_A 6-phosphogluconate dehy 87.2 0.53 1.8E-05 47.0 4.8 34 57-90 5-38 (474)
490 1smk_A Malate dehydrogenase, g 87.2 0.4 1.4E-05 45.2 3.8 35 56-90 7-44 (326)
491 1y1p_A ARII, aldehyde reductas 86.9 0.95 3.3E-05 42.7 6.3 34 56-89 10-44 (342)
492 1b0a_A Protein (fold bifunctio 86.9 0.58 2E-05 42.6 4.4 34 56-89 158-192 (288)
493 4gsl_A Ubiquitin-like modifier 86.7 0.64 2.2E-05 47.2 5.0 36 56-91 325-361 (615)
494 3vh1_A Ubiquitin-like modifier 86.5 0.59 2E-05 47.3 4.7 35 56-90 326-361 (598)
495 4a5o_A Bifunctional protein fo 86.5 0.73 2.5E-05 41.9 4.9 34 56-89 160-194 (286)
496 1gpj_A Glutamyl-tRNA reductase 86.5 0.6 2.1E-05 45.5 4.7 35 56-90 166-201 (404)
497 2gcg_A Glyoxylate reductase/hy 86.5 0.77 2.6E-05 43.3 5.3 35 56-90 154-188 (330)
498 2dbq_A Glyoxylate reductase; D 86.5 0.76 2.6E-05 43.5 5.2 35 56-90 149-183 (334)
499 3p2o_A Bifunctional protein fo 86.4 0.73 2.5E-05 41.9 4.8 34 56-89 159-193 (285)
500 3ce6_A Adenosylhomocysteinase; 86.4 0.64 2.2E-05 46.3 4.9 35 56-90 273-307 (494)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=2.3e-37 Score=312.79 Aligned_cols=417 Identities=18% Similarity=0.264 Sum_probs=284.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccCCCCeeeeeeeeec--CCcchHHHHHHHcCCCCccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFF--GAYPNIQNLFGELGINDRLQ 135 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~--~~~~~~~~l~~~lg~~~~~~ 135 (529)
+||+|||||++||+||++|+++|++|+|||+++++||++.++. .+|+.+|.|++.+. .....+.++++++|++..+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~ 79 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLS-YKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIV 79 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEE-ETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeec-cCCcEEcCCCceEecCCCccHHHHHHHHhCCCceEE
Confidence 5999999999999999999999999999999999999998875 57999999986554 23456889999999876543
Q ss_pred ccccceee-ecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhhhcCchhhhccCCccHHHHHH
Q 009678 136 WKEHSMIF-AMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (529)
Q Consensus 136 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (529)
........ ........+. ... .......+ ...+...++.+....+..... ...+..++.+|++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~s~~~~l~ 143 (425)
T 3ka7_A 80 RSEMTTVRVPLKKGNPDYV---KGF-KDISFNDF------PSLLSYKDRMKIALLIVSTRK------NRPSGSSLQAWIK 143 (425)
T ss_dssp ECCCCEEEEESSTTCCSST---TCE-EEEEGGGG------GGGSCHHHHHHHHHHHHHTTT------SCCCSSBHHHHHH
T ss_pred ecCCceEEeecCCCccccc---ccc-cceehhhh------hhhCCHHHHHHHHHHHHhhhh------cCCCCCCHHHHHH
Confidence 33211111 1111100000 000 00000000 012233333322221111000 1224588999999
Q ss_pred HcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhhhccCCeeeeecCCCCccchHHHHHHHHHcCcEEEecce
Q 009678 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSR 294 (529)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~l~~~l~~~l~~~G~~i~~~t~ 294 (529)
++ +..+..+.++.++....++.++++++.......+..... .+. ..++.|+ +..+++.|.+.++++|++|+++++
T Consensus 144 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~~-~~~~~gG-~~~l~~~l~~~~~~~G~~i~~~~~ 218 (425)
T 3ka7_A 144 SQ-VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYR--FGG-TGIPEGG-CKGIIDALETVISANGGKIHTGQE 218 (425)
T ss_dssp HH-CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH--HCS-CEEETTS-HHHHHHHHHHHHHHTTCEEECSCC
T ss_pred Hh-cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHh--cCC-ccccCCC-HHHHHHHHHHHHHHcCCEEEECCc
Confidence 87 566777777878777777788999988766655554322 222 3456666 789999999999999999999999
Q ss_pred eeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCch-h--hhHHHHHhhcCCCcCeEEEEEEecCCccccc
Q 009678 295 VQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENW-K--EMAYFKRLEKLVGVPVINIHIWFDRKLKNTY 371 (529)
Q Consensus 295 V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~-~--~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~ 371 (529)
|++|..+ ++.+.+|++. |++++||+||+|+|++.+..|+++.. . +..+.+++.++.+.+.+++++.++++.+..
T Consensus 219 V~~i~~~-~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~- 295 (425)
T 3ka7_A 219 VSKILIE-NGKAAGIIAD-DRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVGH- 295 (425)
T ss_dssp EEEEEEE-TTEEEEEEET-TEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSCS-
T ss_pred eeEEEEE-CCEEEEEEEC-CEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccCc-
Confidence 9999985 5566668775 77899999999999999999987432 2 456677888888888899999999887543
Q ss_pred Cccccc-CC-cceeeeccccccccccCCCCceEEEEecCccccCCCChHHHHHHHHHHHHHhCCCCccccccccEEEEEE
Q 009678 372 DHLLFS-SS-LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYH 449 (529)
Q Consensus 372 ~~~~~~-~~-~~~~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~p~~~~~~~~~~~~~~~~ 449 (529)
..+.+. +. .+..+...|..++.++|+|.+++.+......++.+. .++.++.++++|++++|+ ... .+ ..
T Consensus 296 ~~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~p~-~~~-----~~--~~ 366 (425)
T 3ka7_A 296 TGVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAPENVKN-LESEIEMGLEDLKEIFPG-KRY-----EV--LL 366 (425)
T ss_dssp SSEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECGGGGGG-HHHHHHHHHHHHHHHSTT-CCE-----EE--EE
T ss_pred CEEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEeccccccccc-hHHHHHHHHHHHHHhCCC-Cce-----EE--EE
Confidence 333333 21 122344556677888999998876544322222122 245579999999999987 221 12 24
Q ss_pred EeccCCcccccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHH
Q 009678 450 VVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 509 (529)
Q Consensus 450 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i~~ 509 (529)
..+|+.+.+.+.++.. .++...+|++|||+|||++.+.+..+|++|+.||+++|++|+.
T Consensus 367 v~~~~~~~P~~~~~~~-~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 367 IQSYHDEWPVNRAASG-TDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp EEEEBTTBCSBSSCTT-CCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC---
T ss_pred EEEECCCccccccccC-CCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhhC
Confidence 5567777777777643 4566788899999999999986557999999999999999863
No 2
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=4.2e-38 Score=325.87 Aligned_cols=429 Identities=17% Similarity=0.208 Sum_probs=282.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccCCCCeeeeeeeeecCCcchHHHHHHHcCCCCccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQ 135 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~~ 135 (529)
.++||+|||||++||+||+.|+++|++|+|||+++++||++.+.....|+.+|.|++++.+.+..+.++++++|++....
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~ 82 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKV 82 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCcceec
Confidence 35799999999999999999999999999999999999999987643589999999999877778899999999876433
Q ss_pred ccccceeeecCCCCCCcccccCCCCCCCch-----hHHHHHHhcCCCCChHHHHHHhhcchhh-hhcCchhhhccCCccH
Q 009678 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPL-----NGILAILRNNEMLTWPEKVKFAIGLLPA-IIGGQAYVEAQDGLTV 209 (529)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~ 209 (529)
+.....++... +.. +.+...++... ..+..++. .+......... ...........+.+++
T Consensus 83 ~~~~~~~~~~~---g~~--~~~~~~~p~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 148 (520)
T 1s3e_A 83 NEVERLIHHVK---GKS--YPFRGPFPPVWNPITYLDHNNFWR---------TMDDMGREIPSDAPWKAPLAEEWDNMTM 148 (520)
T ss_dssp CCSSEEEEEET---TEE--EEECSSSCCCCSHHHHHHHHHHHH---------HHHHHHTTSCTTCGGGSTTHHHHHTSBH
T ss_pred ccCCceEEEEC---CEE--EEecCCCCCCCCHHHHHHHHHHHH---------HHHHHHhhcCcCCCccccchhhhhccCH
Confidence 32222222111 111 11122222210 01111110 01111100000 0000011122456899
Q ss_pred HHHHHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHH------hhhccCCeeeeecCCCCccchHHHHHHHH
Q 009678 210 QEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF------LQEKHGSKMAFLDGNPPERLCLPIVEHIQ 283 (529)
Q Consensus 210 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~g~~~~~l~~~l~~~l~ 283 (529)
.+|+++..... ....++..+....++.++++++.......+... +....+....++.|| ++.+++.|++.+
T Consensus 149 ~~~l~~~~~~~-~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG-~~~l~~~l~~~l- 225 (520)
T 1s3e_A 149 KELLDKLCWTE-SAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGG-SGQVSERIMDLL- 225 (520)
T ss_dssp HHHHHHHCSSH-HHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTC-THHHHHHHHHHH-
T ss_pred HHHHHhhCCCH-HHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCC-HHHHHHHHHHHc-
Confidence 99999986654 446677777777778889999887665433211 111122233455665 788888888765
Q ss_pred HcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCchhhhHHHHHhhcCCCcCeEEEEEEe
Q 009678 284 SLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWF 363 (529)
Q Consensus 284 ~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 363 (529)
|++|+++++|++|..+++ .+ .|++.+|+++.||+||+|+|+..+..++.++..+..+.++++++.+.++.++++.|
T Consensus 226 --g~~i~~~~~V~~i~~~~~-~v-~v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~ 301 (520)
T 1s3e_A 226 --GDRVKLERPVIYIDQTRE-NV-LVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYY 301 (520)
T ss_dssp --GGGEESSCCEEEEECSSS-SE-EEEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCBCCEEEEEEEC
T ss_pred --CCcEEcCCeeEEEEECCC-eE-EEEECCCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCCCcceEEEEEEe
Confidence 689999999999997544 44 48888998999999999999999888864443455667888899999999999999
Q ss_pred cCCcccccC--cccc--c--CCcceeeeccccccccccCCC-CceEEEEecC--ccccCCCChHHHHHHHHHHHHHhCCC
Q 009678 364 DRKLKNTYD--HLLF--S--SSLLSVYADMSLTCKEYYNPN-QSMLELVFAP--AEEWISCSDSEIIDATMKELAKLFPD 434 (529)
Q Consensus 364 ~~~~~~~~~--~~~~--~--~~~~~~~~~~s~~~~~~~~~~-~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~~p~ 434 (529)
++++|.... +..+ . .+... ..+.+ .+++ ..++..+... ...|..++++++.+.++++|.++||.
T Consensus 302 ~~~~w~~~~~~g~~~~~~~~~~~~~-~~d~~------~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~ 374 (520)
T 1s3e_A 302 KEPFWRKKDYCGTMIIDGEEAPVAY-TLDDT------KPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGS 374 (520)
T ss_dssp SSCGGGGGTEEEEEEECSTTCSCSE-EEECC------CTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTC
T ss_pred CCCcccCCCCCceeeccCCCCceEE-EeeCC------CCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCc
Confidence 999986422 1111 1 11111 11111 1232 2455443332 36788889999999999999999986
Q ss_pred CccccccccEEEEEEEeccCC--cccc--cCCCC-CCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHH
Q 009678 435 EISADQSKAKIVKYHVVKTPR--SVYK--TIPNC-EPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 509 (529)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~p~--~~~~--~~~~~-~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i~~ 509 (529)
.....+ ..+...+|...|+ |.+. +.|+. ....+.+++|++||||||++++..|.++|+||+.||+++|++|++
T Consensus 375 ~~~~~p--~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~ 452 (520)
T 1s3e_A 375 LEALEP--VHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILH 452 (520)
T ss_dssp GGGGCC--SEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHH
T ss_pred cccCCc--cEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHH
Confidence 311111 1234445554444 3332 23332 122345678899999999999877788999999999999999999
Q ss_pred HHhhH
Q 009678 510 DYVLL 514 (529)
Q Consensus 510 ~l~~~ 514 (529)
.++..
T Consensus 453 ~l~~~ 457 (520)
T 1s3e_A 453 AMGKI 457 (520)
T ss_dssp HTTSS
T ss_pred HHhcC
Confidence 98653
No 3
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=3.7e-37 Score=317.25 Aligned_cols=430 Identities=15% Similarity=0.119 Sum_probs=276.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccCCCCeeeeeeeeecCCcchHHHHHHHcCCCCcccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQW 136 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~~~ 136 (529)
.+||+|||||++||+||+.|++.|++|+|||+++++||++.+.. .+|+.+|.|++++.+.++++.++++++|+...+..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~~~~ 117 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSN-IDGYPYEMGGTWVHWHQSHVWREITRYKMHNALSP 117 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEE-ETTEEEECSCCCBCTTSHHHHHHHHHTTCTTCEEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecc-cCCeeecCCCeEecCccHHHHHHHHHcCCcceeec
Confidence 47999999999999999999999999999999999999999876 57899999999998888889999999998644332
Q ss_pred cc----cceeeecCCCCCCcccccCCCCCCCc--hhHHH----HHHhcCCCCChHHHHHHhhcchh--hhhcCchhhhcc
Q 009678 137 KE----HSMIFAMPNKPGEFSRFDFPEVLPAP--LNGIL----AILRNNEMLTWPEKVKFAIGLLP--AIIGGQAYVEAQ 204 (529)
Q Consensus 137 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 204 (529)
.. ....+......+.... ++.. ...+. .++..... ....+.. ............
T Consensus 118 ~~~~~~~~~~~~~~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 183 (495)
T 2vvm_A 118 SFNFSRGVNHFQLRTNPTTSTY------MTHEAEDELLRSALHKFTNVDGT--------NGRTVLPFPHDMFYVPEFRKY 183 (495)
T ss_dssp SCCCSSSCCEEEEESSTTCCEE------ECHHHHHHHHHHHHHHHHCSSSS--------TTTTTCSCTTSTTSSTTHHHH
T ss_pred ccccCCCceEEEecCCCCceee------cCHHHHHHHHHHHHHHHHccchh--------hhhhcCCCCCCcccCcchhhh
Confidence 21 1111111110011100 1110 00011 11110000 0000000 000001112334
Q ss_pred CCccHHHHHHHcC--CChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhhh----ccCCeeeeecCCCCccchHHH
Q 009678 205 DGLTVQEWMRKQG--VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE----KHGSKMAFLDGNPPERLCLPI 278 (529)
Q Consensus 205 ~~~s~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~g~~~~~l~~~l 278 (529)
+.+++.+|+++.+ +... ...++..++...++.++++++....+..+...... ........+.|| +..+++.|
T Consensus 184 ~~~s~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG-~~~l~~~l 261 (495)
T 2vvm_A 184 DEMSYSERIDQIRDELSLN-ERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDG-QSAFARRF 261 (495)
T ss_dssp HTSBHHHHHHHHGGGCCHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTC-HHHHHHHH
T ss_pred hhhhHHHHHHHhhccCCHH-HHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCC-HHHHHHHH
Confidence 5789999999876 5554 35677777777777888998887665443211000 001112234555 78999999
Q ss_pred HHHHHHcC-cEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCchhhhHHHHHhhcCCCcCeE
Q 009678 279 VEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVI 357 (529)
Q Consensus 279 ~~~l~~~G-~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 357 (529)
.+.+.+.| ++|+++++|++|+.++++ + .|++.+|++++||+||+|+|+..+..+...+..+..+.++++.+.+.+..
T Consensus 262 ~~~l~~~g~~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~ai~~~~~~~~~ 339 (495)
T 2vvm_A 262 WEEAAGTGRLGYVFGCPVRSVVNERDA-A-RVTARDGREFVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVSMCT 339 (495)
T ss_dssp HHHHHTTTCEEEESSCCEEEEEECSSS-E-EEEETTCCEEEEEEEEECCCGGGGGGSEEESCCCHHHHHHHHHCCCCCCE
T ss_pred HHHhhhcCceEEEeCCEEEEEEEcCCE-E-EEEECCCCEEEcCEEEECCCHHHHhheeeCCCCCHHHHHHHHhcCCCcee
Confidence 99999998 999999999999985444 3 58888888899999999999999988753333345566788889999999
Q ss_pred EEEEEecCCcccccCccccc-CCcceeeeccccccccccCCCCceEEEEecCccccCCCChHHHHHHHHHHHHHhCCCCc
Q 009678 358 NIHIWFDRKLKNTYDHLLFS-SSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEI 436 (529)
Q Consensus 358 ~v~l~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~p~~~ 436 (529)
++++.|++++|..+.++... .+....+.+ ...+.+..++..+ .+... .+++++..+.++++|.+++|+..
T Consensus 340 kv~l~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~~~~vl~~~-~~~~~--~~~~~e~~~~~~~~L~~~~~~~~ 410 (495)
T 2vvm_A 340 KVHAEVDNKDMRSWTGIAYPFNKLCYAIGD------GTTPAGNTHLVCF-GNSAN--HIQPDEDVRETLKAVGQLAPGTF 410 (495)
T ss_dssp EEEEEESCGGGGGEEEEECSSCSSCEEEEE------EECTTSCEEEEEE-ECSTT--CCCTTTCHHHHHHHHHTTSTTSC
T ss_pred EEEEEECCccCCCceeEecCCCCcEEEecC------CCCCCCCeEEEEE-eCccc--cCCCHHHHHHHHHHHHHhcCCCC
Confidence 99999999888644333222 222222211 1123444555543 33221 14556677889999999988621
Q ss_pred cccccccEEEEEEEeccCCc--ccc-cCCCCC-CCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHh
Q 009678 437 SADQSKAKIVKYHVVKTPRS--VYK-TIPNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 512 (529)
Q Consensus 437 ~~~~~~~~~~~~~~~~~p~~--~~~-~~~~~~-~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i~~~l~ 512 (529)
. ...+..++|...|+. .|. +.|+.. ...+.+.+|.+||||||++++..|.++||||+.||++||++|++.++
T Consensus 411 ~----~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~ 486 (495)
T 2vvm_A 411 G----VKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEELG 486 (495)
T ss_dssp C----EEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred C----ceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHhc
Confidence 1 122334445444543 332 234421 12334456789999999999987889999999999999999999886
Q ss_pred hHHhhc
Q 009678 513 LLAARG 518 (529)
Q Consensus 513 ~~~~~~ 518 (529)
...+.+
T Consensus 487 ~~~~~~ 492 (495)
T 2vvm_A 487 TKREVK 492 (495)
T ss_dssp CC----
T ss_pred cccCCC
Confidence 654443
No 4
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=1.9e-36 Score=308.62 Aligned_cols=426 Identities=15% Similarity=0.150 Sum_probs=272.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccCCCCeeeeeeeeecCCcchHHHHHHHcCCCCcccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQW 136 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~~~ 136 (529)
++||+|||||++||+||+.|++.|++|+|||+++++||++.+... .|+.+|.|++++......+.++++++|++....+
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTI-DGAVLEIGGQWVSPDQTALISLLDELGLKTFERY 83 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEE-TTEEEECSCCCBCTTCHHHHHHHHHTTCCEEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceecccc-CCceeccCCeEecCccHHHHHHHHHcCCcccccc
Confidence 579999999999999999999999999999999999999988764 6889999999988777778899999998764433
Q ss_pred cccceeeecCCCCCCcccccCCCCCC-CchhHHHHHHhcCCCCChHHHHHHhhcchh-hhhcCchhhhccCCccHHHHHH
Q 009678 137 KEHSMIFAMPNKPGEFSRFDFPEVLP-APLNGILAILRNNEMLTWPEKVKFAIGLLP-AIIGGQAYVEAQDGLTVQEWMR 214 (529)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~l~ 214 (529)
.....++... ++.. +.+....+ ........+... ...+..+..... ............+..++.+|++
T Consensus 84 ~~~~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 153 (453)
T 2yg5_A 84 REGESVYISS--AGER--TRYTGDSFPTNETTKKEMDRL------IDEMDDLAAQIGAEEPWAHPLARDLDTVSFKQWLI 153 (453)
T ss_dssp CCSEEEEECT--TSCE--EEECSSSCSCCHHHHHHHHHH------HHHHHHHHHHHCSSCGGGSTTHHHHHSSBHHHHHH
T ss_pred cCCCEEEEeC--CCce--eeccCCCCCCChhhHHHHHHH------HHHHHHHHhhcCCCCCCCCcchhhhhhccHHHHHH
Confidence 3322222211 1111 11111121 111111111100 000111100000 0000001112345689999999
Q ss_pred HcCCChHHHHHHHHHHHhhcCCCCCc-cccHHHHHHHHHHH------hhhccCCeeeeecCCCCccchHHHHHHHHHcCc
Q 009678 215 KQGVPDRVTTEVFIAMSKALNFINPD-ELSMQCILIALNRF------LQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGG 287 (529)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~g~~~~~~~g~~~~~l~~~l~~~l~~~G~ 287 (529)
+.+... ....++..+....++.+++ +++....+..+... +. ..+....++.|| ++.+++.|++.+ |+
T Consensus 154 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~gG-~~~l~~~l~~~l---g~ 227 (453)
T 2yg5_A 154 NQSDDA-EARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVD-EDFILDKRVIGG-MQQVSIRMAEAL---GD 227 (453)
T ss_dssp HHCSCH-HHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHC-HHHHTCEEETTC-THHHHHHHHHHH---GG
T ss_pred hhcCCH-HHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhcc-CCCcceEEEcCC-hHHHHHHHHHhc---CC
Confidence 986554 4455777776667777888 88887665433221 00 001123455665 788888888765 68
Q ss_pred EEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCchhhhHHHHHhhcCCCcCeEEEEEEecCCc
Q 009678 288 EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKL 367 (529)
Q Consensus 288 ~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~ 367 (529)
+|+++++|++|..++++.+ .|++ +|++++||+||+|+|++.+..++.++..+..+.++++++.+.+..++++.|++++
T Consensus 228 ~i~~~~~V~~i~~~~~~~v-~v~~-~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~ 305 (453)
T 2yg5_A 228 DVFLNAPVRTVKWNESGAT-VLAD-GDIRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPF 305 (453)
T ss_dssp GEECSCCEEEEEEETTEEE-EEET-TTEEEEEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGEEECCEEEEEEEESSCG
T ss_pred cEEcCCceEEEEEeCCceE-EEEE-CCeEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCC
Confidence 9999999999997544313 4766 6778999999999999998888644434555667888888889999999999999
Q ss_pred ccccC--ccccc--CCcceeeeccccccccccCCC-CceEEEEecC--ccccCCCChHHHHHHHHHHHHHhCCCCccccc
Q 009678 368 KNTYD--HLLFS--SSLLSVYADMSLTCKEYYNPN-QSMLELVFAP--AEEWISCSDSEIIDATMKELAKLFPDEISADQ 440 (529)
Q Consensus 368 ~~~~~--~~~~~--~~~~~~~~~~s~~~~~~~~~~-~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~~p~~~~~~~ 440 (529)
|.... +..+. .+... ..+.+ .+++ ..++..+... ...|..++++++++.++++|.++||..... +
T Consensus 306 w~~~~~~g~~~~~~~~~~~-~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~~~-p 377 (453)
T 2yg5_A 306 WREDGLSGTGFGASEVVQE-VYDNT------NHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGPKAEE-P 377 (453)
T ss_dssp GGGGTEEEEEECTTSSSCE-EEECC------CTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCGGGGC-C
T ss_pred CCCCCCCceeecCCCCeEE-EEeCC------CCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCccCCC-c
Confidence 86421 11121 22211 11211 2233 3344433321 256777889999999999999999853211 1
Q ss_pred cccEEEEEEEeccCC--cccc--cCCC-CCCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHH
Q 009678 441 SKAKIVKYHVVKTPR--SVYK--TIPN-CEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 511 (529)
Q Consensus 441 ~~~~~~~~~~~~~p~--~~~~--~~~~-~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i~~~l 511 (529)
..+...+|...|+ |.|. +.++ .....+.+.+|++||||||++++..|.|+|+||+.||+++|++|++.+
T Consensus 378 --~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 451 (453)
T 2yg5_A 378 --VVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIARS 451 (453)
T ss_dssp --SEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHHC
T ss_pred --cEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccccchHHHHHHHHHHHHHHHHHh
Confidence 1222333433333 3332 2344 112234567889999999999987777899999999999999999876
No 5
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=100.00 E-value=1.5e-34 Score=291.51 Aligned_cols=400 Identities=15% Similarity=0.191 Sum_probs=262.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccCCCCeeeeeeeeecC--CcchHHHHHHHcCCCCccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFG--AYPNIQNLFGELGINDRLQ 135 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~--~~~~~~~l~~~lg~~~~~~ 135 (529)
+||+|||||++||+||++|+++|++|+|||+++++||++.++. .+|+.+|.|++.+.. ....+.++++++|+...+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~ 79 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLP-YKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIV 79 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEE-ETTEEEESSSCSEETTTTSSHHHHHHHHHTCCCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEec-cCCEEEecCCeEEEccCCChHHHHHHHHhCCcceEE
Confidence 4999999999999999999999999999999999999998876 579999999866543 3456889999999865433
Q ss_pred ccccceeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhhhcCchhhhccCCccHHHHHHH
Q 009678 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRK 215 (529)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 215 (529)
.......+.. .+.... +.. .. ..+...++.+........... ....+..++.+|+.+
T Consensus 80 ~~~~~~~~~~---~g~~~~--~~~----~~----------~~l~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~l~~ 136 (421)
T 3nrn_A 80 NSNPKGKILW---EGKIFH--YRE----SW----------KFLSVKEKAKALKLLAEIRMN----KLPKEEIPADEWIKE 136 (421)
T ss_dssp ECSSSCEEEE---TTEEEE--GGG----GG----------GGCC--------CCHHHHHTT----CCCCCCSBHHHHHHH
T ss_pred ECCCCeEEEE---CCEEEE--cCC----ch----------hhCCHhHHHHHHHHHHHHHhc----cCCCCCCCHHHHHHH
Confidence 2221111111 111111 000 00 001111111111100000000 011234789999999
Q ss_pred cCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhhhccCCeeeeecCCCCccchHHHHHHHHHcCcEEEeccee
Q 009678 216 QGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRV 295 (529)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~l~~~l~~~l~~~G~~i~~~t~V 295 (529)
.++..+....++.++....++.++.+++.......+..... .+. ..++.+| +..+++.|++.++++|++|+++++|
T Consensus 137 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g-~~~~~gG-~~~l~~~l~~~~~~~G~~i~~~~~V 212 (421)
T 3nrn_A 137 KIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALR--WGG-PGLIRGG-CKAVIDELERIIMENKGKILTRKEV 212 (421)
T ss_dssp HTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH--HCS-CEEETTC-HHHHHHHHHHHHHTTTCEEESSCCE
T ss_pred hcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhh--cCC-cceecCC-HHHHHHHHHHHHHHCCCEEEcCCeE
Confidence 87777777788888877777888999988766655554422 122 3456666 8999999999999999999999999
Q ss_pred eEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCchhhhHHHHHhhcCCCcCeEEEEEEecCCcccccCccc
Q 009678 296 QKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLL 375 (529)
Q Consensus 296 ~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~ 375 (529)
++|..+ ++.+ | +.+|++++||+||+|+|++.+.+|++....+..+.+++.++.+.+.+++++.++++.... ..+.
T Consensus 213 ~~i~~~-~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~~~~ 287 (421)
T 3nrn_A 213 VEINIE-EKKV--Y-TRDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIG-NTIV 287 (421)
T ss_dssp EEEETT-TTEE--E-ETTCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEEEEESSCSSC-SSEE
T ss_pred EEEEEE-CCEE--E-EeCCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEEEEcCCcccC-CeEE
Confidence 999974 4444 5 456778999999999999999999874333445667788888889999999999874322 2333
Q ss_pred cc-CCcceeeeccccccccccCCCCceEEEEecCccccCCCChHHHHHHHHHHHHHhCCCCccccccccEEEEEEEeccC
Q 009678 376 FS-SSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTP 454 (529)
Q Consensus 376 ~~-~~~~~~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~p~~~~~~~~~~~~~~~~~~~~p 454 (529)
+. ++.+......+..++...|+|..++.+...- ...+.++..+.++++|++++|. . .++ .+.+|+
T Consensus 288 ~~~~~~~~~i~~~s~~~p~~ap~G~~~~~~~~~~----~~~~~~~~~~~~~~~L~~~~p~-~-------~~~--~~~~~~ 353 (421)
T 3nrn_A 288 FTPGLMINGFNEPSALDKSLAREGYTLIMAHMAL----KNGNVKKAIEKGWEELLEIFPE-G-------EPL--LAQVYR 353 (421)
T ss_dssp ECTTSSSCEEECGGGTCGGGSCTTEEEEEEEEEC----TTCCHHHHHHHHHHHHHHHCTT-C-------EEE--EEEEC-
T ss_pred EcCCcceeeEeccCCCCCCcCCCCceEEEEEEee----ccccHHHHHHHHHHHHHHHcCC-C-------eEE--Eeeecc
Confidence 33 2222223345566777888888776543321 1233446699999999999992 1 122 223345
Q ss_pred CcccccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHH
Q 009678 455 RSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 507 (529)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i 507 (529)
.+++.+.+......+ .++ +|||+|||++.+.+...|++|+.||.+||+.|
T Consensus 354 ~~~p~~~~~~~~~~~--~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 354 DGNPVNRTRAGLHIE--WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp ------------CCC--CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred CCCCcccccCCCCCC--CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 555544322111122 567 99999999999852225599999999999998
No 6
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=1.5e-36 Score=311.02 Aligned_cols=421 Identities=19% Similarity=0.235 Sum_probs=273.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC------CCeEEEeccccCCceeEeeccCCCCeeeeeeeeecCCcchHHHHHHHcCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAG------HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGI 130 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g------~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~ 130 (529)
++||+|||||++||+||++|+++| ++|+|||+++++||++.+.. .+|+.+|.|++++...++++.++++++|+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~-~~g~~~d~G~~~~~~~~~~~~~l~~~lgl 83 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVK-KDGYIIERGPDSFLERKKSAPQLVKDLGL 83 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEEC-CTTCCEESSCCCEETTCTHHHHHHHHTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEec-cCCEEeccChhhhhhCCHHHHHHHHHcCC
Confidence 579999999999999999999999 99999999999999999876 47899999999998888889999999999
Q ss_pred CCcccccccceeeecCCCCCCcccccCCC--CCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhhhcCchhhhccCCcc
Q 009678 131 NDRLQWKEHSMIFAMPNKPGEFSRFDFPE--VLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLT 208 (529)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 208 (529)
+...........+... .+....+.... ..|.. +..++. ...+....+.+....... +.....+..+
T Consensus 84 ~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~p~~---~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~s 151 (470)
T 3i6d_A 84 EHLLVNNATGQSYVLV--NRTLHPMPKGAVMGIPTK---IAPFVS-TGLFSLSGKARAAMDFIL------PASKTKDDQS 151 (470)
T ss_dssp CTTEEECCCCCEEEEC--SSCEEECCC-------------------------CCSHHHHHHHHS------CCCSSSSCCB
T ss_pred cceeecCCCCccEEEE--CCEEEECCCCcccCCcCc---hHHhhc-cCcCCHHHHHHHhcCccc------CCCCCCCCcC
Confidence 8765422111111111 11111111000 01110 111110 011111111111111110 0112345689
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHH-------hhh---------------ccCCeeeee
Q 009678 209 VQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-------LQE---------------KHGSKMAFL 266 (529)
Q Consensus 209 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---------------~~g~~~~~~ 266 (529)
+.+|+++. +..++.+.++.++....+..++++++.......+..+ ... ..+..+..+
T Consensus 152 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (470)
T 3i6d_A 152 LGEFFRRR-VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTL 230 (470)
T ss_dssp HHHHHHHH-SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EEEE
T ss_pred HHHHHHHh-cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEe
Confidence 99999986 6778888888999988988899998876543322100 000 001233445
Q ss_pred cCCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCchhhhHHHH
Q 009678 267 DGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFK 346 (529)
Q Consensus 267 ~g~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~ 346 (529)
.+| +..+++.|++.+.+ ++|+++++|++|+.++++ + .|++.+|++++||+||+|+|++.+..++++.. ...
T Consensus 231 ~~g-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-~-~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~~----~~~ 301 (470)
T 3i6d_A 231 STG-LQTLVEEIEKQLKL--TKVYKGTKVTKLSHSGSC-Y-SLELDNGVTLDADSVIVTAPHKAAAGMLSELP----AIS 301 (470)
T ss_dssp TTC-THHHHHHHHHTCCS--EEEECSCCEEEEEECSSS-E-EEEESSSCEEEESEEEECSCHHHHHHHTTTST----THH
T ss_pred CCh-HHHHHHHHHHhcCC--CEEEeCCceEEEEEcCCe-E-EEEECCCCEEECCEEEECCCHHHHHHHcCCch----hhH
Confidence 555 67788877776644 699999999999986554 3 68899998899999999999999999886642 246
Q ss_pred HhhcCCCcCeEEEEEEecCCccccc-Ccc--ccc-CCc---ceeeeccccccccccCCCCceEEEEecCc--cccCCCCh
Q 009678 347 RLEKLVGVPVINIHIWFDRKLKNTY-DHL--LFS-SSL---LSVYADMSLTCKEYYNPNQSMLELVFAPA--EEWISCSD 417 (529)
Q Consensus 347 ~~~~~~~~~~~~v~l~~~~~~~~~~-~~~--~~~-~~~---~~~~~~~s~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~ 417 (529)
++..+.+.++.++++.|++++|... ... .+. ... ....+ .+...+...|++..++.+++... ..+...++
T Consensus 302 ~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~-~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~ 380 (470)
T 3i6d_A 302 HLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTW-TNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSD 380 (470)
T ss_dssp HHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEE-HHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCH
T ss_pred HHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEE-EcCcCCCcCCCCCEEEEEEECCCCCccccCCCH
Confidence 7888889999999999999998532 221 122 111 11111 12123344556666666555432 34567889
Q ss_pred HHHHHHHHHHHHHhCCCCccccccccEEEEEEEeccCCcccccCCCCCC----CCCCCCCCCCCeEEecccccCCCCCch
Q 009678 418 SEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYTKQKYLASM 493 (529)
Q Consensus 418 ~~~~~~~l~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~l~~aG~~~~~~~~~~~ 493 (529)
+++.+.++++|.++||.... +......+|+.+.+.+.++... ..+.+.++.+||||||+++.+ .+|
T Consensus 381 ~~~~~~~~~~l~~~~g~~~~-------p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g---~gv 450 (470)
T 3i6d_A 381 NDIINIVLEDLKKVMNINGE-------PEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEG---VGI 450 (470)
T ss_dssp HHHHHHHHHHHGGGSCCCSC-------CSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSC---CSH
T ss_pred HHHHHHHHHHHHHHhCCCCC-------ceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCC---CCH
Confidence 99999999999999986321 2234445566666556655321 112233457899999998865 479
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 009678 494 EGAVLSGKLCAQAIVQDY 511 (529)
Q Consensus 494 ~gA~~Sg~~aA~~i~~~l 511 (529)
++|+.||+++|++|++.|
T Consensus 451 ~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 451 PDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999999876
No 7
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=8.3e-36 Score=305.97 Aligned_cols=420 Identities=17% Similarity=0.226 Sum_probs=274.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccCCCCeeeeeeeeecCCcchHHHHHHHcCCCCcc
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~ 134 (529)
...+||+|||||++||+||+.|+++|++|+|||+++++||++.+.. .+|+.+|.|++++...++.+.++++++|+...+
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~~ 92 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHA-LAGYLVEQGPNSFLDREPATRALAAALNLEGRI 92 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEE-ETTEEEESSCCCEETTCHHHHHHHHHTTCGGGE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeec-cCCeeeecChhhhhhhhHHHHHHHHHcCCccee
Confidence 4568999999999999999999999999999999999999999976 478999999999987778899999999987543
Q ss_pred cccc---cceeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhhhcCchhhhccCCccHHH
Q 009678 135 QWKE---HSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQE 211 (529)
Q Consensus 135 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 211 (529)
.+.. ...++.. ++.. +. +|.. ...++.. ....+.++.+.+....... ....+..++.+
T Consensus 93 ~~~~~~~~~~~~~~---~g~~--~~----~p~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~s~~~ 153 (478)
T 2ivd_A 93 RAADPAAKRRYVYT---RGRL--RS----VPAS---PPAFLAS-DILPLGARLRVAGELFSRR------APEGVDESLAA 153 (478)
T ss_dssp ECSCSSCCCEEEEE---TTEE--EE----CCCS---HHHHHTC-SSSCHHHHHHHHGGGGCCC------CCTTCCCBHHH
T ss_pred eecCccccceEEEE---CCEE--EE----CCCC---HHHhccC-CCCCHHHHHHHhhhhhcCC------CCCCCCCCHHH
Confidence 3221 0111111 1111 11 1111 2222221 2333444443332221110 01245689999
Q ss_pred HHHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhh----------------------hccC----Ceeee
Q 009678 212 WMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ----------------------EKHG----SKMAF 265 (529)
Q Consensus 212 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~g----~~~~~ 265 (529)
|+++. +..++.+.++.++....++.++++++....+..+..+.. ...+ ..+.+
T Consensus 154 ~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (478)
T 2ivd_A 154 FGRRH-LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALST 232 (478)
T ss_dssp HHHHH-TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEE
T ss_pred HHHHh-hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEE
Confidence 99986 778888888888888888889999887655433322110 0011 34555
Q ss_pred ecCCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEE---cCCcEEecCEEEEccCHHHHhhhCCCchhhh
Q 009678 266 LDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYVFATPVDILKLQLPENWKEM 342 (529)
Q Consensus 266 ~~g~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~---~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~ 342 (529)
+.|| +..+++.|++.+ |++|+++++|++|..++++. .|++ .+|++++||+||+|+|++.+..|+++. +.
T Consensus 233 ~~gG-~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~~--~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~l--~~ 304 (478)
T 2ivd_A 233 FDGG-LQVLIDALAASL---GDAAHVGARVEGLAREDGGW--RLIIEEHGRRAELSVAQVVLAAPAHATAKLLRPL--DD 304 (478)
T ss_dssp ETTC-THHHHHHHHHHH---GGGEESSEEEEEEECC--CC--EEEEEETTEEEEEECSEEEECSCHHHHHHHHTTT--CH
T ss_pred ECCC-HHHHHHHHHHHh---hhhEEcCCEEEEEEecCCeE--EEEEeecCCCceEEcCEEEECCCHHHHHHHhhcc--CH
Confidence 6666 788888888877 57999999999999865553 5776 677789999999999999998888653 44
Q ss_pred HHHHHhhcCCCcCeEEEEEEecCCcccccCcc--ccc----CCcceeeeccccccccccCCCCceEEEEecC--ccccCC
Q 009678 343 AYFKRLEKLVGVPVINIHIWFDRKLKNTYDHL--LFS----SSLLSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWIS 414 (529)
Q Consensus 343 ~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~--~~~----~~~~~~~~~~s~~~~~~~~~~~~~l~~~~~~--~~~~~~ 414 (529)
.+.+++.++.+.+..++++.|++++|...... .+. .+.....++ +...+...|++..+++++... ...|..
T Consensus 305 ~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~~~p~g~~~l~~~~~~~~~~~~~~ 383 (478)
T 2ivd_A 305 ALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHA-STTFPFRAEGGRVLYSCMVGGARQPGLVE 383 (478)
T ss_dssp HHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEH-HHHCGGGBSTTCEEEEEEEECTTCGGGGG
T ss_pred HHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEE-cccCCCcCCCCCEEEEEEeCCcCCccccC
Confidence 55677888998999999999999887531111 111 112222222 111233345566666544432 234557
Q ss_pred CChHHHHHHHHHHHHHhCCCCccccccccEEEEEEEeccCCcccccCCCCCCC----CCCCCCCCCCeEEecccccCCCC
Q 009678 415 CSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPC----RPLQRSPVEGFYLAGDYTKQKYL 490 (529)
Q Consensus 415 ~~~~~~~~~~l~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----~~~~~~~~~~l~~aG~~~~~~~~ 490 (529)
.+++++.+.++++|.+++|.... +......+|+.+.+.+.++.... .+.... ++||||||+++.+
T Consensus 384 ~~~~~~~~~~~~~l~~~~~~~~~-------p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~-~~~l~~aG~~~~g--- 452 (478)
T 2ivd_A 384 QDEDALAALAREELKALAGVTAR-------PSFTRVFRWPLGIPQYNLGHLERVAAIDAALQR-LPGLHLIGNAYKG--- 452 (478)
T ss_dssp SCHHHHHHHHHHHHHHHHCCCSC-------CSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHT-STTEEECSTTTSC---
T ss_pred CCHHHHHHHHHHHHHHHhCCCCC-------CcEEEEEECCCcccCCCcCHHHHHHHHHHHHhh-CCCEEEEccCCCC---
Confidence 78999999999999999986321 12233456666654455542110 011112 6899999999843
Q ss_pred CchHHHHHHHHHHHHHHHHHHhhHH
Q 009678 491 ASMEGAVLSGKLCAQAIVQDYVLLA 515 (529)
Q Consensus 491 ~~~~gA~~Sg~~aA~~i~~~l~~~~ 515 (529)
.+|++|+.||+++|++|++.+++.+
T Consensus 453 ~gv~gA~~SG~~aA~~i~~~l~~~~ 477 (478)
T 2ivd_A 453 VGLNDCIRNAAQLADALVAGNTSHA 477 (478)
T ss_dssp CSHHHHHHHHHHHHHHHCC------
T ss_pred CCHHHHHHHHHHHHHHHHHhhccCC
Confidence 5799999999999999988776543
No 8
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=5.8e-35 Score=301.52 Aligned_cols=435 Identities=19% Similarity=0.232 Sum_probs=216.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccCCCCeeeeeeeeecCCcchHHHHHHHcCCCC--cc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIND--RL 134 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~--~~ 134 (529)
+++|||||||++||+||++|+++|++|+|||+++++||++.++. .+|+.+|.|+|++... ..+.++++.+|.+. .+
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~-~~G~~~D~G~~~~~~~-~~~~~l~~~~g~~~~~~~ 78 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYE-DQGFTFDAGPTVITDP-SAIEELFALAGKQLKEYV 78 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEE-ETTEEEECSCCCBSCT-HHHHHHHHTTTCCGGGTC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEE-eCCEEEecCceeecCc-hhHHHHHHHhcchhhhce
Confidence 46899999999999999999999999999999999999999987 5899999999988632 23567788887543 23
Q ss_pred cccccceeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCC---CChHHHHHHhhcchhh----h-----------hc
Q 009678 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEM---LTWPEKVKFAIGLLPA----I-----------IG 196 (529)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----~-----------~~ 196 (529)
.+.+.+..+.....++.. +.+.. ....+...+..... ..+.........+... . ..
T Consensus 79 ~~~~~~~~~~~~~~~g~~--~~~~~----~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (501)
T 4dgk_A 79 ELLPVTPFYRLCWESGKV--FNYDN----DQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLGTVPFLSFRDMLR 152 (501)
T ss_dssp CEEEESSSEEEEETTSCE--EEECS----CHHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--CCCCCCCHHHHHH
T ss_pred eeEecCcceEEEcCCCCE--EEeec----cHHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhccccccchhhhhhh
Confidence 333322222222122221 11111 11111111110000 0000000000000000 0 00
Q ss_pred Cchhhhc-cCCccHHHHHHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhhhccCCeeeeecCCCCccch
Q 009678 197 GQAYVEA-QDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC 275 (529)
Q Consensus 197 ~~~~~~~-~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~l~ 275 (529)
....... ....++.+++.+. +..+.....+..... ..+..+.+.+....+ ..+.....| ..++.|| ++.++
T Consensus 153 ~~~~~~~l~~~~~~~~~~~~~-~~~~~l~~~l~~~~~-~~g~~p~~~~~~~~~---~~~~~~~~G--~~~p~GG-~~~l~ 224 (501)
T 4dgk_A 153 AAPQLAKLQAWRSVYSKVASY-IEDEHLRQAFSFHSL-LVGGNPFATSSIYTL---IHALEREWG--VWFPRGG-TGALV 224 (501)
T ss_dssp SGGGTTTSHHHHHHHHHHHTT-CCCHHHHHHHHHHHH-HHHSCC--CCCTHHH---HHHHHSCCC--EEEETTH-HHHHH
T ss_pred hhhhhhhhhhcccHHHHHHHH-hccHHHHhhhhhhhc-ccCCCcchhhhhhhh---hhhhhccCC--eEEeCCC-CcchH
Confidence 0000000 0012445555554 333333333332211 112233332222111 112222222 3467776 89999
Q ss_pred HHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH-HHhhhCCCchhhhHHHHHhhcCCCc
Q 009678 276 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD-ILKLQLPENWKEMAYFKRLEKLVGV 354 (529)
Q Consensus 276 ~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~ 354 (529)
+.|++.++++|++|+++++|++|..+ ++++++|++.+|+++.||.||++++++ ++..|+++...+......+....+.
T Consensus 225 ~aL~~~~~~~Gg~I~~~~~V~~I~~~-~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 303 (501)
T 4dgk_A 225 QGMIKLFQDLGGEVVLNARVSHMETT-GNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAVKQSNKLQTKRMS 303 (501)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSCEEECCC---------------------------C
T ss_pred HHHHHHHHHhCCceeeecceeEEEee-CCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccchhhhhhhhccccC
Confidence 99999999999999999999999984 667778999999999999999988765 5567777665555555566655554
Q ss_pred -CeEEEEEEecCCcccccC-ccccc----------------CCcceeeec-cccccccccCCCCceEE-EEecCccccCC
Q 009678 355 -PVINIHIWFDRKLKNTYD-HLLFS----------------SSLLSVYAD-MSLTCKEYYNPNQSMLE-LVFAPAEEWIS 414 (529)
Q Consensus 355 -~~~~v~l~~~~~~~~~~~-~~~~~----------------~~~~~~~~~-~s~~~~~~~~~~~~~l~-~~~~~~~~~~~ 414 (529)
+.+++++.++.+...... .+.+. .....++.. .+..++..+|+|...+. .+..+...+..
T Consensus 304 ~s~~~~~~~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~~~~~ 383 (501)
T 4dgk_A 304 NSLFVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHLGTAN 383 (501)
T ss_dssp CEEEEEEEEESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCTTTSC
T ss_pred CceeEEEecccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCcccccc
Confidence 467788888776432111 11111 001122222 33456778888887654 33444433322
Q ss_pred C----ChHHHHHHHHHHHHHh-CCCCccccccccEEEEEEEeccCCcc-----------cccCC---CCCCCCCCC-CCC
Q 009678 415 C----SDSEIIDATMKELAKL-FPDEISADQSKAKIVKYHVVKTPRSV-----------YKTIP---NCEPCRPLQ-RSP 474 (529)
Q Consensus 415 ~----~~~~~~~~~l~~l~~~-~p~~~~~~~~~~~~~~~~~~~~p~~~-----------~~~~~---~~~~~~~~~-~~~ 474 (529)
. .++++.+.+++.|++. +|+.. ..+ ......+|... |+..+ +....+|.. .+|
T Consensus 384 ~~~~~~~~~~~~~vl~~l~~~~~P~~~------~~i-~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~ 456 (501)
T 4dgk_A 384 LDWTVEGPKLRDRIFAYLEQHYMPGLR------SQL-VTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKT 456 (501)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTCTTHH------HHE-EEEEEECTTTTC------------------------------C
T ss_pred ccHHHHHHHHHHHHHHHHHHhhCCChH------Hce-EEEEECCHHHHHHHcCCCCccccChhcchhhccccCCCCCCCC
Confidence 2 2467888899999875 47632 122 33334455432 22211 122345544 378
Q ss_pred CCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhhHHhh
Q 009678 475 VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAAR 517 (529)
Q Consensus 475 ~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i~~~l~~~~~~ 517 (529)
++|||+||+++.++ ++|+||+.||++||++|+++|....-+
T Consensus 457 i~gLyl~G~~t~pG--~Gv~ga~~SG~~aA~~il~dL~gG~~~ 497 (501)
T 4dgk_A 457 ITNLYLVGAGTHPG--AGIPGVIGSAKATAGLMLEDLIGGSHH 497 (501)
T ss_dssp CTTEEECCCH--------HHHHHHHHHHHHHHHHHHHC-----
T ss_pred CCCEEEECCCCCCc--ccHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 99999999999987 799999999999999999999665443
No 9
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=303.96 Aligned_cols=419 Identities=18% Similarity=0.172 Sum_probs=276.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC--CeEEEeccccCCceeEeeccCCCCeeeeeeeeecCC---cchHHHHHHHcCCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGA---YPNIQNLFGELGIN 131 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~---~~~~~~l~~~lg~~ 131 (529)
++||+|||||++||+||++|+++|+ +|+|||+++++||++.+....+|+.+|.|++++... +..+.++++++|++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~ 81 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLD 81 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCG
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCc
Confidence 4699999999999999999999999 999999999999999987655799999999988653 45678999999998
Q ss_pred Cccccccc-----ceeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhhhcCchhhhccCC
Q 009678 132 DRLQWKEH-----SMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDG 206 (529)
Q Consensus 132 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (529)
+.+..... ...+... .+.... ++..+ ..+ +.....+...........+.. .....++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~--~g~~~~--~p~~~----~~~---~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 143 (477)
T 3nks_A 82 SEVLPVRGDHPAAQNRFLYV--GGALHA--LPTGL----RGL---LRPSPPFSKPLFWAGLRELTK-------PRGKEPD 143 (477)
T ss_dssp GGEEEECTTSHHHHCEEEEE--TTEEEE--CCCSS----CC------CCTTSCSCSSHHHHTTTTS-------CCCCSSC
T ss_pred ceeeecCCCCchhcceEEEE--CCEEEE--CCCCh----hhc---ccccchhhhHHHHHHHHhhhc-------CCCCCCC
Confidence 65432210 0001000 111111 01000 000 000000100001111111110 0112356
Q ss_pred ccHHHHHHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhhh---------------------------cc
Q 009678 207 LTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE---------------------------KH 259 (529)
Q Consensus 207 ~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~ 259 (529)
.++.+|+++. +..++.+.++.++...++..++++++....+..+...... ..
T Consensus 144 ~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (477)
T 3nks_A 144 ETVHSFAQRR-LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAE 222 (477)
T ss_dssp CBHHHHHHHH-HCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHT
T ss_pred cCHHHHHHHh-hCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhccc
Confidence 8899999985 6678888888898888899999999887765443321100 00
Q ss_pred CCeeeeecCCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCch
Q 009678 260 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENW 339 (529)
Q Consensus 260 g~~~~~~~g~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~ 339 (529)
+....++.|| +..+++.|++.+.++|++|+++++|++|..++++. +.|++. |++++||+||+|+|++.+..|+++..
T Consensus 223 ~~~~~~~~gG-~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~-~~v~~~-~~~~~ad~vv~a~p~~~~~~ll~~~~ 299 (477)
T 3nks_A 223 RWSQWSLRGG-LEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGR-WKVSLR-DSSLEADHVISAIPASVLSELLPAEA 299 (477)
T ss_dssp TCSEEEETTC-TTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGC-EEEECS-SCEEEESEEEECSCHHHHHHHSCGGG
T ss_pred CccEEEECCC-HHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCce-EEEEEC-CeEEEcCEEEECCCHHHHHHhccccC
Confidence 1123455666 89999999999999999999999999999854442 357765 44899999999999999999987643
Q ss_pred hhhHHHHHhhcCCCcCeEEEEEEecCCcccccC-ccccc----CCcceeeecccccccccc-CCCCceEEEEecCc--cc
Q 009678 340 KEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYD-HLLFS----SSLLSVYADMSLTCKEYY-NPNQSMLELVFAPA--EE 411 (529)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~-~~~~~----~~~~~~~~~~s~~~~~~~-~~~~~~l~~~~~~~--~~ 411 (529)
....+.+.++.+.++.++++.|++++|.... +...+ .+..++.++.+ .++... +++..++.++.... ..
T Consensus 300 --~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~l~~~~gg~~~~~ 376 (477)
T 3nks_A 300 --APLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSV-AFPEQDGSPPGLRVTVMLGGSWLQT 376 (477)
T ss_dssp --HHHHHHHHTCCEEEEEEEEEEETTCCCSSCSSEEECCTTTCSSEEEEECHHH-HCGGGSTTTTCEEEEEEECHHHHHH
T ss_pred --HHHHHHHhcCCCCcEEEEEEEECCCCCCCCCceEEccCCCCCCceEEEEecc-ccCCCCCCCCceEEEEEECCccccc
Confidence 3456778889999999999999999874211 11121 12223333222 122222 34666665554421 11
Q ss_pred c----CCCChHHHHHHHHHHHHHhCCCCccccccccEEEEEEEeccCCcccccCCCCCCCCCC----CCCCCCCeEEecc
Q 009678 412 W----ISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPL----QRSPVEGFYLAGD 483 (529)
Q Consensus 412 ~----~~~~~~~~~~~~l~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~~~~l~~aG~ 483 (529)
+ ...+++++++.++++|.++++... .+..+...+|+.+.+.+.++....+.. .....++||+||+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~L~~~~g~~~-------~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~ 449 (477)
T 3nks_A 377 LEASGCVLSQELFQQRAQEAAATQLGLKE-------MPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGA 449 (477)
T ss_dssp HHHSSCCCCHHHHHHHHHHHHHHHHCCCS-------CCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECST
T ss_pred cccccCCCCHHHHHHHHHHHHHHHhCCCC-------CCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEcc
Confidence 2 146899999999999999997521 123456677788888777764321111 1112368999999
Q ss_pred cccCCCCCchHHHHHHHHHHHHHHHHH
Q 009678 484 YTKQKYLASMEGAVLSGKLCAQAIVQD 510 (529)
Q Consensus 484 ~~~~~~~~~~~gA~~Sg~~aA~~i~~~ 510 (529)
++.+ .+|++|+.||+++|++|+.+
T Consensus 450 ~~~G---~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 450 SYEG---VAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp TTSC---CSHHHHHHHHHHHHHHHHHC
T ss_pred CCCC---CcHHHHHHHHHHHHHHHHhc
Confidence 9854 58999999999999999875
No 10
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=1.2e-35 Score=304.48 Aligned_cols=424 Identities=18% Similarity=0.234 Sum_probs=276.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC--CCeEEEeccccCCceeEeeccCCCCeeeeeeeeecCCcchHHHHHHHcCCCCcc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g--~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~ 134 (529)
++||+|||||++||+||++|+++| ++|+|||+++++||++.+.. .+|+.+|.|++++...+..+.++++++|++...
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~~~~ 82 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYR-EDGFTIERGPDSYVARKHILTDLIEAIGLGEKL 82 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEEC-STTCCEESSCCCEETTSTHHHHHHHHTTCGGGE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEe-eCCEEEecCchhhhcccHHHHHHHHHcCCcceE
Confidence 579999999999999999999999 99999999999999998865 478999999999988888899999999998755
Q ss_pred cccccceeeecCCCCCCcccccCC--CCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhhhcCchhhhccCCccHHHH
Q 009678 135 QWKEHSMIFAMPNKPGEFSRFDFP--EVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEW 212 (529)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 212 (529)
........+... .+....+... ...|.. +..++. ...+....+. ........ .........+..++.+|
T Consensus 83 ~~~~~~~~~~~~--~g~~~~~p~~~~~~~p~~---~~~~~~-~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~s~~~~ 153 (475)
T 3lov_A 83 VRNNTSQAFILD--TGGLHPIPKGAVMGIPTD---LDLFRQ-TTLLTEEEKQ-EVADLLLH--PSDSLRIPEQDIPLGEY 153 (475)
T ss_dssp EECCCCCEEEEE--TTEEEECCSSEETTEESC---HHHHTT-CSSSCHHHHH-HHHHHHHS--CCTTCCCCSSCCBHHHH
T ss_pred eecCCCceEEEE--CCEEEECCCcccccCcCc---hHHHhh-ccCCChhHHH-HhhCcccC--CcccccCCCCCcCHHHH
Confidence 432111111111 1111111100 001111 122221 2333333333 11111110 00001113456899999
Q ss_pred HHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHH-------h----hhc--------------cCCeeeeec
Q 009678 213 MRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-------L----QEK--------------HGSKMAFLD 267 (529)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~--------------~g~~~~~~~ 267 (529)
+++. +..++.+.++.++....+..++++++....+..+..+ . ... .+..+.++.
T Consensus 154 l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (475)
T 3lov_A 154 LRPR-LGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLE 232 (475)
T ss_dssp HHHH-HCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEET
T ss_pred HHHH-hCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeC
Confidence 9985 6778888889999988988888888754332222111 0 000 123445566
Q ss_pred CCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCchhhhHHHHH
Q 009678 268 GNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKR 347 (529)
Q Consensus 268 g~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~ 347 (529)
+| +..+++.|++.+.+ ++|+++++|++|+.++++ + .|+|.+| +++||+||+|+|++.+..++++.. . +.
T Consensus 233 ~G-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-~-~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~~~--~---~~ 301 (475)
T 3lov_A 233 TG-LESLIERLEEVLER--SEIRLETPLLAISREDGR-Y-RLKTDHG-PEYADYVLLTIPHPQVVQLLPDAH--L---PE 301 (475)
T ss_dssp TC-HHHHHHHHHHHCSS--CEEESSCCCCEEEEETTE-E-EEECTTC-CEEESEEEECSCHHHHHHHCTTSC--C---HH
T ss_pred Ch-HHHHHHHHHhhccC--CEEEcCCeeeEEEEeCCE-E-EEEECCC-eEECCEEEECCCHHHHHHHcCccC--H---HH
Confidence 65 77888888877654 699999999999985444 3 5888899 899999999999999999987652 2 66
Q ss_pred hhcCCCcCeEEEEEEecCCcccccCcccc--c-C-Cc--ceeeeccccccccccCCCCceEEEEecC--ccccCCCChHH
Q 009678 348 LEKLVGVPVINIHIWFDRKLKNTYDHLLF--S-S-SL--LSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCSDSE 419 (529)
Q Consensus 348 ~~~~~~~~~~~v~l~~~~~~~~~~~~~~~--~-~-~~--~~~~~~~s~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~ 419 (529)
+..+.+.++.++++.|+++++.+.....+ . . +. ....++ +..++...|. ..++..++.. ...+...++++
T Consensus 302 ~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~-s~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~e~ 379 (475)
T 3lov_A 302 LEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAI-DQKWNHSAPD-HTVLRAFVGRPGNDHLVHESDEV 379 (475)
T ss_dssp HHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEH-HHHCTTTCTT-EEEEEEEECBTTBCGGGGSCHHH
T ss_pred HhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEE-cccCCCCCCC-cEEEEEEeCCCCCCcccCCCHHH
Confidence 78888999999999999988433332211 1 1 11 111111 2222333333 4455444432 24456788999
Q ss_pred HHHHHHHHHHHhCCCCccccccccEEEEEEEeccCCcccccCCCCCC----CCCCCCCCCCCeEEecccccCCCCCchHH
Q 009678 420 IIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYTKQKYLASMEG 495 (529)
Q Consensus 420 ~~~~~l~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~l~~aG~~~~~~~~~~~~g 495 (529)
+++.++++|.++||... . +......+|+...+.+.++... ..+.+.++.+||||||+++.+ .+|++
T Consensus 380 ~~~~~~~~L~~~~g~~~--~-----p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g---~g~~~ 449 (475)
T 3lov_A 380 LQQAVLQDLEKICGRTL--E-----PKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDG---VGLPD 449 (475)
T ss_dssp HHHHHHHHHHHHHSSCC--C-----CSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSC---SSHHH
T ss_pred HHHHHHHHHHHHhCCCC--C-----CeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCC---CCHHH
Confidence 99999999999998632 1 2234445555665556555321 112233457899999998875 47999
Q ss_pred HHHHHHHHHHHHHHHHhhH
Q 009678 496 AVLSGKLCAQAIVQDYVLL 514 (529)
Q Consensus 496 A~~Sg~~aA~~i~~~l~~~ 514 (529)
|+.||+++|++|++.++..
T Consensus 450 a~~sG~~aA~~i~~~l~~~ 468 (475)
T 3lov_A 450 CVASAKTMIESIELEQSHT 468 (475)
T ss_dssp HHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHHHhhcc
Confidence 9999999999999988665
No 11
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=100.00 E-value=2.5e-35 Score=304.35 Aligned_cols=427 Identities=17% Similarity=0.187 Sum_probs=269.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccCCCCeeeeeeeeecCCcchHHHHHHHcCCCCccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQ 135 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~~ 135 (529)
..+||+|||||++||+||+.|+++|++|+|||+++++||++.+.. .+|+.+|.|++++...++.+.++++++|+.....
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~~~ 90 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVS-QDGLIWDEGANTMTESEGDVTFLIDSLGLREKQQ 90 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEE-ETTEEEESSCCCBCCCSHHHHHHHHHTTCGGGEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeec-cCCeEEecCCcccccCcHHHHHHHHHcCCcccce
Confidence 468999999999999999999999999999999999999998876 4789999999999877788999999999876543
Q ss_pred ccccc-eeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhhhcCchhhhccCCccHHHHHH
Q 009678 136 WKEHS-MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (529)
Q Consensus 136 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (529)
+.... ..+.. .++... . +|.. ...++. ...+.+..+++........... .......+..++.+|++
T Consensus 91 ~~~~~~~~~~~--~~g~~~--~----~p~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~l~ 157 (504)
T 1sez_A 91 FPLSQNKRYIA--RNGTPV--L----LPSN---PIDLIK-SNFLSTGSKLQMLLEPILWKNK-KLSQVSDSHESVSGFFQ 157 (504)
T ss_dssp CCSSCCCEEEE--SSSSEE--E----CCSS---HHHHHH-SSSSCHHHHHHHHTHHHHC-----------CCCBHHHHHH
T ss_pred eccCCCceEEE--ECCeEE--E----CCCC---HHHHhc-cccCCHHHHHHHhHhhhccCcc-cccccCCCCccHHHHHH
Confidence 32211 01111 011111 0 1111 112222 1233343333332211100000 00001134589999999
Q ss_pred HcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHH-----------h----hhc---------------cCCeee
Q 009678 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-----------L----QEK---------------HGSKMA 264 (529)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~----~~~---------------~g~~~~ 264 (529)
++ +..++.+.++.++....++.++++++....+..+... + ... ......
T Consensus 158 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (504)
T 1sez_A 158 RH-FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSF 236 (504)
T ss_dssp HH-HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCB
T ss_pred HH-cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceE
Confidence 87 7778888888888888888899998876543222111 1 000 011233
Q ss_pred eecCCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCC----EEEEEEc--CC---cEEecCEEEEccCHHHHhhhC
Q 009678 265 FLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGT----VKNFLLT--NG---NVIDGDAYVFATPVDILKLQL 335 (529)
Q Consensus 265 ~~~g~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~----~~~v~~~--~G---~~i~ad~VI~a~~~~~~~~l~ 335 (529)
++.|| ++.|++.|++.+.+ ++|+++++|++|..++++. .+.|++. +| ++++||+||+|+|+..+..++
T Consensus 237 ~~~GG-~~~l~~~l~~~l~~--~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll 313 (504)
T 1sez_A 237 SFLGG-MQTLTDAICKDLRE--DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMK 313 (504)
T ss_dssp EETTC-THHHHHHHHTTSCT--TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSE
T ss_pred eeCcH-HHHHHHHHHhhccc--ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHh
Confidence 45555 67777777765421 6899999999999865552 1245543 55 578999999999999999987
Q ss_pred CC---chhhhHHHHHhhcCCCcCeEEEEEEecCCcccc-cCc--ccccC-------CcceeeeccccccccccCCCCceE
Q 009678 336 PE---NWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT-YDH--LLFSS-------SLLSVYADMSLTCKEYYNPNQSML 402 (529)
Q Consensus 336 ~~---~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~~~--~~~~~-------~~~~~~~~~s~~~~~~~~~~~~~l 402 (529)
.+ ...+. ..+..+.+.++.++++.|++++|.. ..+ +.+.. +..+..+ .+..++...|++..++
T Consensus 314 ~~~~~~~~~~---~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~-~s~~~~~~~p~g~~~l 389 (504)
T 1sez_A 314 IAKRGNPFLL---NFIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLF-SSMMFPDRAPNNVYLY 389 (504)
T ss_dssp EESSSSBCCC---TTSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEE-HHHHCGGGSCTTEEEE
T ss_pred hcccCCcccH---HHHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEe-eccccCCcCCCCCEEE
Confidence 31 11111 1256677778999999999988753 221 11111 1112111 1223344456666665
Q ss_pred EEEecC--ccccCCCChHHHHHHHHHHHHHhCCCCccccccccEEEEEEEeccCCcccccCCCCCCCC---CCCCCCCCC
Q 009678 403 ELVFAP--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR---PLQRSPVEG 477 (529)
Q Consensus 403 ~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~---~~~~~~~~~ 477 (529)
..+... ...|..++++++++.++++|.+++|....+ ......+|+.+.+.+.+++.... +...++++|
T Consensus 390 ~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~~p-------~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~ 462 (504)
T 1sez_A 390 TTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEP-------TYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKNLPG 462 (504)
T ss_dssp EEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCSCC-------SSEEEEEEEEEEECCCTTHHHHHHHHHHHHHHSTT
T ss_pred EEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCCCC-------eEEEEeECCCCCCccCcCHHHHHHHHHHHHHhCCC
Confidence 544332 245777899999999999999999863211 12223344445445555432111 112346789
Q ss_pred eEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhhH
Q 009678 478 FYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 514 (529)
Q Consensus 478 l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i~~~l~~~ 514 (529)
|||||+++.+ .+|++|+.||+++|++|++.++..
T Consensus 463 l~~aG~~~~g---~~v~gai~sG~~aA~~il~~l~~~ 496 (504)
T 1sez_A 463 LFYAGNHRGG---LSVGKALSSGCNAADLVISYLESV 496 (504)
T ss_dssp EEECCSSSSC---SSHHHHHHHHHHHHHHHHHHHSSC
T ss_pred EEEEeecCCC---CCHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999874 589999999999999999988654
No 12
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=100.00 E-value=2.2e-31 Score=269.44 Aligned_cols=412 Identities=17% Similarity=0.186 Sum_probs=249.2
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccC--CCCeeeeeeeeecCC-cchHHHHHHHcCCCCcc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG--DGDWYETGLHIFFGA-YPNIQNLFGELGINDRL 134 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~--~g~~~d~G~~~~~~~-~~~~~~l~~~lg~~~~~ 134 (529)
+||+|||||++||+||+.|+++|++|+|||+++++||++.+.... .|..++.|++++... ...+.++++++|++...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~ 81 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKHHPRLAAELDRYGIPTAA 81 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTTCHHHHHHHHHHTCCEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCCcHHHHHHHHHhCCeeee
Confidence 699999999999999999999999999999999999999875422 288999999999877 77888999999987543
Q ss_pred cccccceeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhhhcCchhhhccCCccHHHHHH
Q 009678 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (529)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (529)
........+.. ..+.+. ...+........+... ...................+.....+ .++.+++.
T Consensus 82 ~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~d-~s~~~~l~ 148 (431)
T 3k7m_X 82 ASEFTSFRHRL--GPTAVD-----QAFPIPGSEAVAVEAA-----TYTLLRDAHRIDLEKGLENQDLEDLD-IPLNEYVD 148 (431)
T ss_dssp CCCCCEECCBS--CTTCCS-----SSSCCCGGGHHHHHHH-----HHHHHHHHTTCCTTTCTTSSSCGGGC-SBHHHHHH
T ss_pred cCCCCcEEEEe--cCCeec-----CCCCCCHHHHHHHHHH-----HHHHHHHHHhcCCCCCccCcchhhhc-CCHHHHHH
Confidence 22211111100 011110 0000111111100000 00000000000000000011122344 88999999
Q ss_pred HcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHh---hh-ccCCeeeeecCCCCccchHHHHHHHH-HcCcEE
Q 009678 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL---QE-KHGSKMAFLDGNPPERLCLPIVEHIQ-SLGGEV 289 (529)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~g~~~~~~~g~~~~~l~~~l~~~l~-~~G~~i 289 (529)
..+..... ..++........+.+.++++.......+...- .. ...... ...++ .. .+.+.+. +.| +|
T Consensus 149 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~----~l~~~~~~~~g-~i 220 (431)
T 3k7m_X 149 KLDLPPVS-RQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDE-VFSNG-SA----DLVDAMSQEIP-EI 220 (431)
T ss_dssp HHTCCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCE-EETTC-TH----HHHHHHHTTCS-CE
T ss_pred hcCCCHHH-HHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhh-hcCCc-HH----HHHHHHHhhCC-ce
Confidence 88666543 34455555666677788888766554333210 00 011111 23333 33 3444443 446 99
Q ss_pred EecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCchhhhHHHHHhhcCCCcCeEEEEEEecCCccc
Q 009678 290 RLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKN 369 (529)
Q Consensus 290 ~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~ 369 (529)
+++++|++|+.++++ + .|++.+|++++||+||+|+|...+..+...+..+....+++..+.+....++.+.|+++++.
T Consensus 221 ~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~~ 298 (431)
T 3k7m_X 221 RLQTVVTGIDQSGDV-V-NVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKILIHVRGAEAG 298 (431)
T ss_dssp ESSCCEEEEECSSSS-E-EEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCTT
T ss_pred EeCCEEEEEEEcCCe-E-EEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCcC
Confidence 999999999975444 4 58888997799999999999999888743333345556777788888889999999998743
Q ss_pred ccCcccccCCcceeeeccccccccccC-CCCceEEEEecCccccCCCChHHHHHHHHHHHHHhCCCCccccccccEEEEE
Q 009678 370 TYDHLLFSSSLLSVYADMSLTCKEYYN-PNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKY 448 (529)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~s~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~p~~~~~~~~~~~~~~~ 448 (529)
-+. ..++......+.. .. .+..++........ +... ++ +.+.+.|++++|+.. .......
T Consensus 299 i~~---~~d~~~~~~~~~~------~~~~~~~~l~~~~~g~~-~~~~-~~---~~~~~~l~~~~~~~~-----~~~~~~~ 359 (431)
T 3k7m_X 299 IEC---VGDGIFPTLYDYC------EVSESERLLVAFTDSGS-FDPT-DI---GAVKDAVLYYLPEVE-----VLGIDYH 359 (431)
T ss_dssp EEE---EBSSSSSEEEEEE------ECSSSEEEEEEEEETTT-CCTT-CH---HHHHHHHHHHCTTCE-----EEEEECC
T ss_pred ceE---cCCCCEEEEEeCc------CCCCCCeEEEEEecccc-CCCC-CH---HHHHHHHHHhcCCCC-----ccEeEec
Confidence 111 1122211111111 11 23334433332222 3322 22 346678888888631 1223345
Q ss_pred EEeccCC--ccccc-CCC-CCCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHH
Q 009678 449 HVVKTPR--SVYKT-IPN-CEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 511 (529)
Q Consensus 449 ~~~~~p~--~~~~~-~~~-~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i~~~l 511 (529)
+|...|+ |.|.+ .|+ .....+.+..|.++|||||++++..|.|+|+||+.||++||++|+...
T Consensus 360 ~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~~ 426 (431)
T 3k7m_X 360 DWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILHSH 426 (431)
T ss_dssp CTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC-
T ss_pred ccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHhhh
Confidence 6666665 44543 344 345567778899999999999998899999999999999999998654
No 13
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=100.00 E-value=1.1e-33 Score=293.16 Aligned_cols=420 Identities=15% Similarity=0.186 Sum_probs=265.0
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHC-CCCeEEEeccccCCceeEeeccCCCCeeeeeeeeecCCcchHHHHHHHcCCCCc
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~-g~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~ 133 (529)
+.++||||||||++||+||++|+++ |++|+|||+++++||++.+....+|+.+|.|+|++...++.+.+++++++....
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~~~~~v~~l~~e~~~~~~ 87 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKED 87 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCCCBHHHHHHHHHHSCSGG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecCCCHHHHHHHHHhCCccc
Confidence 4578999999999999999999985 999999999999999998865578999999999999888899999999876542
Q ss_pred c-cccccceeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhhhcCchhhhccCCccHHHH
Q 009678 134 L-QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEW 212 (529)
Q Consensus 134 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 212 (529)
. ........... .+.+..+.+...+ ..+...........+..... ..........++.+|
T Consensus 88 ~~~~~~~~~~i~~---~g~~~~~p~~~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~ 148 (513)
T 4gde_A 88 DWYTHQRISYVRC---QGQWVPYPFQNNI--------------SMLPKEEQVKCIDGMIDAAL--EARVANTKPKTFDEW 148 (513)
T ss_dssp GEEEEECCEEEEE---TTEEEESSGGGGG--------------GGSCHHHHHHHHHHHHHHHH--HHHTCCSCCCSHHHH
T ss_pred eeEEecCceEEEE---CCeEeecchhhhh--------------hhcchhhHHHHHHHHHHHHH--hhhcccccccCHHHH
Confidence 1 11111111111 1221111100000 00111111111111111100 001122345789999
Q ss_pred HHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHH---------HHHHHHh-hhc---c--CCeeeee-cCCCCccchH
Q 009678 213 MRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCIL---------IALNRFL-QEK---H--GSKMAFL-DGNPPERLCL 276 (529)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~-~~~---~--g~~~~~~-~g~~~~~l~~ 276 (529)
+.+. +...+.+.++.++....++.++++++..... ......+ ... . .....++ .|| ++.+++
T Consensus 149 ~~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG-~~~l~~ 226 (513)
T 4gde_A 149 IVRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGG-TGGIWI 226 (513)
T ss_dssp HHHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSH-HHHHHH
T ss_pred HHHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCC-HHHHHH
Confidence 8875 5667777788888888888877776643221 0111111 111 1 1122233 444 889999
Q ss_pred HHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCchhhhHHHHHhhcCCCcCe
Q 009678 277 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPV 356 (529)
Q Consensus 277 ~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 356 (529)
.|++.+.+.|++|+++++|++|..+ ++ .+++.+|+++.||+||+|+|...+..++++.. .......+.+.++
T Consensus 227 ~l~~~l~~~g~~i~~~~~V~~I~~~-~~---~v~~~~G~~~~ad~vI~t~P~~~l~~~l~~~~----~~~~~~~l~y~~~ 298 (513)
T 4gde_A 227 AVANTLPKEKTRFGEKGKVTKVNAN-NK---TVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQE----LVGLTKQLFYSST 298 (513)
T ss_dssp HHHHTSCGGGEEESGGGCEEEEETT-TT---EEEETTSCEEEEEEEEECSCHHHHHHHTTCHH----HHHHHTTCCEEEE
T ss_pred HHHHHHHhcCeeeecceEEEEEEcc-CC---EEEEcCCCEEECCEEEECCCHHHHHHhcCchh----hHhhhhcccCCce
Confidence 9999999999999999999999863 44 36688999999999999999999999887532 2355677888888
Q ss_pred EEEEEEecCCcccccC---cccccCCc--ceeeeccccccccccCCC---------------------CceEEEEec--C
Q 009678 357 INIHIWFDRKLKNTYD---HLLFSSSL--LSVYADMSLTCKEYYNPN---------------------QSMLELVFA--P 408 (529)
Q Consensus 357 ~~v~l~~~~~~~~~~~---~~~~~~~~--~~~~~~~s~~~~~~~~~~---------------------~~~l~~~~~--~ 408 (529)
..+.+.++........ .+.+.++. +.-....++..+...|++ ..++..... .
T Consensus 299 ~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (513)
T 4gde_A 299 HVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVS 378 (513)
T ss_dssp EEEEEEEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCCEEEEEEEEE
T ss_pred EEEEEEEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcceEEEEEeccc
Confidence 8888888765432111 11111110 000111111112222222 122211111 1
Q ss_pred ccccCCCChHHHHHHHHHHHHHhCCCCccccccccEEEEEEEeccCCcccccCCCCCC----CCCCCCCCCCCeEEeccc
Q 009678 409 AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDY 484 (529)
Q Consensus 409 ~~~~~~~~~~~~~~~~l~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~l~~aG~~ 484 (529)
......++++++++.++++|.++.+.... ..++...+.+||++.+.+..+... .++.+.. +|||++|..
T Consensus 379 ~~~~~~~~de~l~~~~~~~L~~~~~i~~~-----~~i~~~~v~r~~~ayP~y~~~~~~~~~~~~~~l~~--~~l~~~GR~ 451 (513)
T 4gde_A 379 ESSMKPVNQETILADCIQGLVNTEMLKPT-----DEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQD--KDIWSRGRF 451 (513)
T ss_dssp EBTTBCCCTTTHHHHHHHHHHHTTSSCTT-----CEEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHH--TTEEECSTT
T ss_pred chhccCCCHHHHHHHHHHHHHHhcCCCCc-----cceEEEEEEECCCeecccCHhHHHHHHHHHHHHhh--cCcEEecCC
Confidence 13344678999999999999998765322 346777888899988877766322 2222222 599999987
Q ss_pred ccCCCC-CchHHHHHHHHHHHHHHHHH
Q 009678 485 TKQKYL-ASMEGAVLSGKLCAQAIVQD 510 (529)
Q Consensus 485 ~~~~~~-~~~~gA~~Sg~~aA~~i~~~ 510 (529)
....|. ++|++|+++|++||+.|++.
T Consensus 452 g~~~Y~~~n~D~a~~~g~~aa~~I~~g 478 (513)
T 4gde_A 452 GSWRYEVGNQDHSFMLGVEAVDNIVNG 478 (513)
T ss_dssp TTCCGGGCSHHHHHHHHHHHHHHHHHC
T ss_pred cccCcCCCCHHHHHHHHHHHHHHHHcC
Confidence 666653 58999999999999999863
No 14
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=100.00 E-value=3.8e-32 Score=277.76 Aligned_cols=422 Identities=18% Similarity=0.227 Sum_probs=246.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEeccccCCceeEeeccCCCCeeeeeeeeecC----CcchHHHHHHH-cC
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFG----AYPNIQNLFGE-LG 129 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~----~~~~~~~l~~~-lg 129 (529)
..+||+|||||++||++|+.|++.|+ +|+|+|+++++||++.+.. ..|+.+|.|++++.+ ....+.+++++ +|
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~-~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~lg 81 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTN-FAGINVELGANWVEGVNGGKMNPIWPIVNSTLK 81 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEE-ETTEEEESSCCEEEEESSSSCCTHHHHHHTTSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecc-cCCcEEeeCCeEEeccCCCCCCHHHHHHHhhcC
Confidence 46799999999999999999999998 8999999999999998865 478899999999973 33458899999 89
Q ss_pred CCCccc-ccccc-eeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhhhcCchhhhccCCc
Q 009678 130 INDRLQ-WKEHS-MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGL 207 (529)
Q Consensus 130 ~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (529)
+..... +.... .++. .++.. . +.......+... .........+.... .. ...++.
T Consensus 82 l~~~~~~~~~~~~~~~~---~~g~~--------~--~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~--~~~~~~ 138 (472)
T 1b37_A 82 LRNFRSDFDYLAQNVYK---EDGGV--------Y--DEDYVQKRIELA-----DSVEEMGEKLSATL---HA--SGRDDM 138 (472)
T ss_dssp CCEEECCCTTGGGCEEC---SSSSB--------C--CHHHHHHHHHHH-----HHHHHHHHHHHHTS---CT--TCTTCC
T ss_pred CceeeccCccccceeEc---CCCCC--------C--CHHHHHHHHHHH-----HHHHHHHHHHHHhh---cc--ccchhh
Confidence 865321 11100 0110 01110 1 111111111100 00000000000000 00 112334
Q ss_pred cHHH--HHHHcCC--ChHHHHHHHHHHHhhc-CCCCCccccHHHHHHHHHHHhhhccCCeeee-ecCCCCccchHHHHHH
Q 009678 208 TVQE--WMRKQGV--PDRVTTEVFIAMSKAL-NFINPDELSMQCILIALNRFLQEKHGSKMAF-LDGNPPERLCLPIVEH 281 (529)
Q Consensus 208 s~~~--~l~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~~~~l~~~l~~~ 281 (529)
++.+ ++.+... .....+.++..+.... +..+++.++...... ...+.. ..+..+.. ..|| +..+++.|++.
T Consensus 139 s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~-~~~~~~-~~~~~~~~~~~gG-~~~l~~~l~~~ 215 (472)
T 1b37_A 139 SILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVP-LATFSD-FGDDVYFVADQRG-YEAVVYYLAGQ 215 (472)
T ss_dssp BHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSS-CHHHHH-HCSEEEEECCTTC-TTHHHHHHHHT
T ss_pred hHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhccc-cccccc-cCCceeeeecCCc-HHHHHHHHHHh
Confidence 4432 4443311 1111122222222111 122233333211100 001111 11112222 2444 78999999988
Q ss_pred HHHc--------CcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCC--CchhhhHHHHHhhcC
Q 009678 282 IQSL--------GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP--ENWKEMAYFKRLEKL 351 (529)
Q Consensus 282 l~~~--------G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~--~~~~~~~~~~~~~~~ 351 (529)
+.+. |++|+++++|++|..++++ + .|++.+|++++||+||+|+|++.+..++. .+..+..+.++++++
T Consensus 216 l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~ 293 (472)
T 1b37_A 216 YLKTDDKSGKIVDPRLQLNKVVREIKYSPGG-V-TVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQF 293 (472)
T ss_dssp TSCBCTTTCCBCCTTEESSCCEEEEEECSSC-E-EEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHS
T ss_pred ccccccccccccccEEEcCCEEEEEEEcCCc-E-EEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhc
Confidence 8765 6799999999999985444 4 48899998899999999999999887642 222345566888888
Q ss_pred CCcCeEEEEEEecCCcccccCc---ccccC---CcceeeeccccccccccCCCCceEEEEecCc--cccCCCChHHHHHH
Q 009678 352 VGVPVINIHIWFDRKLKNTYDH---LLFSS---SLLSVYADMSLTCKEYYNPNQSMLELVFAPA--EEWISCSDSEIIDA 423 (529)
Q Consensus 352 ~~~~~~~v~l~~~~~~~~~~~~---~~~~~---~~~~~~~~~s~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~ 423 (529)
.+.+..++++.|++++|..... +++.. .....+... .... ++..++..++... ..|..++++++.+.
T Consensus 294 ~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-p~~~~l~~~~~~~~a~~~~~~~~~e~~~~ 368 (472)
T 1b37_A 294 DMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYGVWQEF----EKQY-PDANVLLVTVTDEESRRIEQQSDEQTKAE 368 (472)
T ss_dssp EEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSCEEEEC----TTTS-TTCCEEEEEEEHHHHHHHHTSCHHHHHHH
T ss_pred CCcceeEEEEECCCcCCCCCCCcceEEecccCCccceeeecc----cCCC-CCCCEEEEEechHHHHHHHhCCHHHHHHH
Confidence 8889999999999999964111 11110 011111110 1112 3444554433322 35767789999999
Q ss_pred HHHHHHHhCCCCccccccccEEEEEEEeccCC--ccccc-CCCCCC-CCCCCCCCCCCeEEecccccCCCCCchHHHHHH
Q 009678 424 TMKELAKLFPDEISADQSKAKIVKYHVVKTPR--SVYKT-IPNCEP-CRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 499 (529)
Q Consensus 424 ~l~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~--~~~~~-~~~~~~-~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~S 499 (529)
++++|+++||+....+. ......+|...|+ +.|.. .++... ..+.+++|++||||||+++++.|.++|+||+.|
T Consensus 369 ~l~~L~~~~Pg~~~~~~--~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~g~v~GA~~S 446 (472)
T 1b37_A 369 IMQVLRKMFPGKDVPDA--TDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGYVHGAYLS 446 (472)
T ss_dssp HHHHHHHHCTTSCCCCC--SEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTTTSHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCC--ceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCCCchhHHHHH
Confidence 99999999976321111 1222233333343 44432 344321 234457789999999999998777899999999
Q ss_pred HHHHHHHHHHHHhh
Q 009678 500 GKLCAQAIVQDYVL 513 (529)
Q Consensus 500 g~~aA~~i~~~l~~ 513 (529)
|++||++|++.++.
T Consensus 447 G~~aA~~i~~~l~~ 460 (472)
T 1b37_A 447 GIDSAEILINCAQK 460 (472)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988753
No 15
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=100.00 E-value=1.1e-31 Score=276.70 Aligned_cols=426 Identities=15% Similarity=0.140 Sum_probs=253.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeecc-CCCCeeeeeeeeecCCcchHHHHHHHcCCCCcc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKD-GDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~-~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~ 134 (529)
..+||+|||||++||+||+.|++.|++|+|||+++++||++.+... ..++.+|.|++++......+.++++++|+....
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~ 111 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLNE 111 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCcee
Confidence 4679999999999999999999999999999999999999877643 357889999999987777789999999986421
Q ss_pred ccc-ccceeeecCCCCCCc-------ccccCCCCCCCc-hhHHHHHHhcCCCCChHHHHHHhhcchhhhh--cCchhhhc
Q 009678 135 QWK-EHSMIFAMPNKPGEF-------SRFDFPEVLPAP-LNGILAILRNNEMLTWPEKVKFAIGLLPAII--GGQAYVEA 203 (529)
Q Consensus 135 ~~~-~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 203 (529)
... .....+......... ..+.+.- .+.. ......++.. .......... ........
T Consensus 112 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 179 (498)
T 2iid_A 112 FSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPV-KPSEAGKSAGQLYEE-----------SLGKVVEELKRTNCSYILNK 179 (498)
T ss_dssp ECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCC-CGGGTTCCHHHHHHH-----------HTHHHHHHHHHSCHHHHHHH
T ss_pred ecccCCccEEEeCCeeecccccccCccccccCC-CccccCCCHHHHHHH-----------HHHHHHHHHhhccHHHHHHH
Confidence 110 001111110000000 0000000 0000 0000111100 0000000000 00011223
Q ss_pred cCCccHHHHHHHcC-CChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhhhccCCeeeeecCCCCccchHHHHHHH
Q 009678 204 QDGLTVQEWMRKQG-VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHI 282 (529)
Q Consensus 204 ~~~~s~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~l~~~l~~~l 282 (529)
.+..++.+|++..+ +...... .+..+....... ..+......... .+ ..+..+..+.|| ++.+++.|++.+
T Consensus 180 ~~~~s~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~-~~--~~~~~~~~~~gG-~~~l~~~l~~~l 251 (498)
T 2iid_A 180 YDTYSTKEYLIKEGDLSPGAVD-MIGDLLNEDSGY---YVSFIESLKHDD-IF--AYEKRFDEIVDG-MDKLPTAMYRDI 251 (498)
T ss_dssp HTTSBHHHHHHHTSCCCHHHHH-HHHHHTTCGGGT---TSBHHHHHHHHH-HH--TTCCCEEEETTC-TTHHHHHHHHHT
T ss_pred hhhhhHHHHHHHccCCCHHHHH-HHHHhcCcccch---hHHHHHHHHHHh-cc--ccCcceEEeCCc-HHHHHHHHHHhc
Confidence 45688999999865 3433322 222221110000 111111111111 11 122334456666 789999999887
Q ss_pred HHcCcEEEecceeeEEEecCCCCEEEEEEcCCc----EEecCEEEEccCHHHHhhhCCCchhhhHHHHHhhcCCCcCeEE
Q 009678 283 QSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN----VIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVIN 358 (529)
Q Consensus 283 ~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~----~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 358 (529)
.+ +|+++++|++|..++++ + .|++.+|+ +++||+||+|+|...+..+...+..+..+.++++++.+.+..+
T Consensus 252 ~~---~i~~~~~V~~I~~~~~~-v-~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp~~~~~ai~~l~~~~~~k 326 (498)
T 2iid_A 252 QD---KVHFNAQVIKIQQNDQK-V-TVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVHYRSGTK 326 (498)
T ss_dssp GG---GEESSCEEEEEEECSSC-E-EEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEEE
T ss_pred cc---ccccCCEEEEEEECCCe-E-EEEEecCCcccceEEeCEEEECCChHHHhheecCCCCCHHHHHHHHhCCCcceeE
Confidence 64 79999999999985444 3 57777664 4899999999999988887533334556678889999999999
Q ss_pred EEEEecCCcccccC---ccccc-CCcceeeeccccccccccCCCCceEEEEec-C-ccccCCCChHHHHHHHHHHHHHhC
Q 009678 359 IHIWFDRKLKNTYD---HLLFS-SSLLSVYADMSLTCKEYYNPNQSMLELVFA-P-AEEWISCSDSEIIDATMKELAKLF 432 (529)
Q Consensus 359 v~l~~~~~~~~~~~---~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~l~~~~~-~-~~~~~~~~~~~~~~~~l~~l~~~~ 432 (529)
|++.|+++||.... ...+. .+...++.. + ...|++..++..+.. + ...|..++++++.+.++++|.+++
T Consensus 327 v~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~-s----~~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~~~~ 401 (498)
T 2iid_A 327 IFLTCTTKFWEDDGIHGGKSTTDLPSRFIYYP-N----HNFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIH 401 (498)
T ss_dssp EEEEESSCGGGGGTCCSSEEEESSTTCEEECC-S----SCCTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCccCCCccCCcccCCCCcceEEEC-C----CCCCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHHHHHc
Confidence 99999999997521 11111 122222211 1 113445555554332 2 255777899999999999999999
Q ss_pred CCCccc-cccccEEEEEEEeccCCc--cccc-CCC-CCCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHH
Q 009678 433 PDEISA-DQSKAKIVKYHVVKTPRS--VYKT-IPN-CEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 507 (529)
Q Consensus 433 p~~~~~-~~~~~~~~~~~~~~~p~~--~~~~-~~~-~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i 507 (529)
+..... ..........+|...|+. .|.+ .|+ .....+.+.+|.+||||||++++..+ |+|+||+.||+++|++|
T Consensus 402 g~~~~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~~-g~~~GAi~SG~raA~~i 480 (498)
T 2iid_A 402 QLPKKDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAH-GWIDSTIKSGLRAARDV 480 (498)
T ss_dssp TCCHHHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSSS-SCHHHHHHHHHHHHHHH
T ss_pred CCChhhhhhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccCC-cCHHHHHHHHHHHHHHH
Confidence 832111 000112445566665553 3322 222 11122334567899999999997654 79999999999999999
Q ss_pred HHHHh
Q 009678 508 VQDYV 512 (529)
Q Consensus 508 ~~~l~ 512 (529)
++.+.
T Consensus 481 ~~~l~ 485 (498)
T 2iid_A 481 NLASE 485 (498)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99884
No 16
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=100.00 E-value=7.7e-32 Score=277.09 Aligned_cols=424 Identities=16% Similarity=0.169 Sum_probs=242.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccC----------------CCCeeeeeeeeecCCc
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG----------------DGDWYETGLHIFFGAY 118 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~----------------~g~~~d~G~~~~~~~~ 118 (529)
+..+||+|||||++||+||+.|+++|++|+|||+++++||++.+.... .|..++.|++++....
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 88 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQSH 88 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEETTS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhcccHH
Confidence 457899999999999999999999999999999999999998776532 5788999999887666
Q ss_pred chHHHHHHHcCCCCccccccc-ceeee-cCCCCCCcccccCCCCCCCchhH-HHHHHhcCCCCChHHHHHHhhcchhhhh
Q 009678 119 PNIQNLFGELGINDRLQWKEH-SMIFA-MPNKPGEFSRFDFPEVLPAPLNG-ILAILRNNEMLTWPEKVKFAIGLLPAII 195 (529)
Q Consensus 119 ~~~~~l~~~lg~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (529)
.+.++++++|+......... ...+. ... . .+. +....... ...++.. ..+..+..... .
T Consensus 89 -~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~------~~~-g~~~~~~~~~~~~~~~-----~~~l~~~~~~~----~ 150 (489)
T 2jae_A 89 -ITLDYCRELGVEIQGFGNQNANTFVNYQSD-T------SLS-GQSVTYRAAKADTFGY-----MSELLKKATDQ----G 150 (489)
T ss_dssp -THHHHHHHHTCCEEEECCCCTTSEEECCCS-S------TTT-TCCEEHHHHHHHHHHH-----HHHHHHHHHHH----T
T ss_pred -HHHHHHHHcCCceEEccccCCCceEEecCC-c------ccC-CccccHHHHhhhhhcc-----HHHHHHHHHhc----c
Confidence 88999999998643211110 01110 110 0 000 11111111 0010000 00000000000 0
Q ss_pred cCchhhhccCCccHHHHHHHcCCChHHHHHHHHHHHhhcCCCC------------CccccHHHHHHHHHHHhh----hcc
Q 009678 196 GGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFIN------------PDELSMQCILIALNRFLQ----EKH 259 (529)
Q Consensus 196 ~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~----~~~ 259 (529)
.........+..++.+|+++.+-... ...+.......+..+ +.++...... .+..++. ...
T Consensus 151 ~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 227 (489)
T 2jae_A 151 ALDQVLSREDKDALSEFLSDFGDLSD--DGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRS-GIGRNFSFDFGYDQ 227 (489)
T ss_dssp TTTTTSCHHHHHHHHHHHHHHTTCCT--TSCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHH-TTTTTGGGGGCTTT
T ss_pred ccccccchhhHHHHHHHHHHhhhhhh--ccccccccchhhccCCCcccccCCCCCCcCHHHHhhh-hHHHHHhhhhcccc
Confidence 00000001122466677765221000 000000000000000 1111111110 0111111 112
Q ss_pred CCeeeeecCCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCC---cEEecCEEEEccCHHHHhhhCC
Q 009678 260 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPVDILKLQLP 336 (529)
Q Consensus 260 g~~~~~~~g~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G---~~i~ad~VI~a~~~~~~~~l~~ 336 (529)
...+.++.|| ++.|++.|++.+.+ ++|+++++|++|..++++ + .|++.+| ++++||+||+|+|+..+..+..
T Consensus 228 ~~~~~~~~gG-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~ 302 (489)
T 2jae_A 228 AMMMFTPVGG-MDRIYYAFQDRIGT--DNIVFGAEVTSMKNVSEG-V-TVEYTAGGSKKSITADYAICTIPPHLVGRLQN 302 (489)
T ss_dssp SSSEEEETTC-TTHHHHHHHHHHCG--GGEETTCEEEEEEEETTE-E-EEEEEETTEEEEEEESEEEECSCHHHHTTSEE
T ss_pred CccEEeecCC-HHHHHHHHHHhcCC--CeEEECCEEEEEEEcCCe-E-EEEEecCCeEEEEECCEEEECCCHHHHHhCcc
Confidence 2345556666 78999999988753 689999999999985444 3 4777776 5799999999999999888865
Q ss_pred CchhhhHHHHHhhcCCCcCeEEEEEEecCCcccccCcc----ccc-CCcceeeeccccccccccCCCCceEEEEecC--c
Q 009678 337 ENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHL----LFS-SSLLSVYADMSLTCKEYYNPNQSMLELVFAP--A 409 (529)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~----~~~-~~~~~~~~~~s~~~~~~~~~~~~~l~~~~~~--~ 409 (529)
+ .+....+++.++.+.+..++++.|++++|.....+ ... .+...++.. +... ..+...++..+... .
T Consensus 303 ~--l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~-s~~~---~~~~~~l~~~~~~g~~~ 376 (489)
T 2jae_A 303 N--LPGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIMFP-YDHY---NSDRGVVVAYYSSGKRQ 376 (489)
T ss_dssp C--CCHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCEEECC-SSST---TSSCEEEEEEEEETHHH
T ss_pred C--CCHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceEEEeC-CCCC---CCCCCEEEEEeeCCchh
Confidence 2 34456678888999999999999999998643121 111 233222221 1111 11222333222222 2
Q ss_pred cccCCCChHHHHHHHHHHHHHhCCCCccccccccEEEEEEEeccCCc--cccc-C------CC-CCCCCCCCCCCCCCeE
Q 009678 410 EEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRS--VYKT-I------PN-CEPCRPLQRSPVEGFY 479 (529)
Q Consensus 410 ~~~~~~~~~~~~~~~l~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~--~~~~-~------~~-~~~~~~~~~~~~~~l~ 479 (529)
..|..++++++++.++++|.+++|....... ......+|...|+. .+.. . |+ .....+.+.+|.+|||
T Consensus 377 ~~~~~~~~~~~~~~~l~~L~~~~~~~~~~~~--~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 454 (489)
T 2jae_A 377 EAFESLTHRQRLAKAIAEGSEIHGEKYTRDI--SSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDKIY 454 (489)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHCGGGGSSE--EEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTTEE
T ss_pred hhhhcCCHHHHHHHHHHHHHHHcCcchhhhc--cccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCcEE
Confidence 5577889999999999999999986111111 12233445555543 2211 1 33 1122234456789999
Q ss_pred EecccccCCCCCchHHHHHHHHHHHHHHHHHHhh
Q 009678 480 LAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 513 (529)
Q Consensus 480 ~aG~~~~~~~~~~~~gA~~Sg~~aA~~i~~~l~~ 513 (529)
|||++++. +.++|+||+.||+++|++|+..++.
T Consensus 455 faG~~~~~-~~~~v~gAi~sg~~aA~~i~~~l~~ 487 (489)
T 2jae_A 455 FAGDHLSN-AIAWQHGALTSARDVVTHIHERVAQ 487 (489)
T ss_dssp ECSGGGBS-STTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred EeEHHhcc-CccHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999964 4589999999999999999987754
No 17
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.98 E-value=5.7e-32 Score=279.32 Aligned_cols=421 Identities=16% Similarity=0.182 Sum_probs=234.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC-CCeEEEeccccCCceeEeeccCCCCeeeeeeeeecCCc-chHHHHHHHcCCCCc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAY-PNIQNLFGELGINDR 133 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g-~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~-~~~~~l~~~lg~~~~ 133 (529)
..+||+|||||++||+||+.|+++| ++|+|||+++++||++.+....+|+.+|.|++++.+.. ..+.+++.++|+...
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~~~~~~~~~~lg~~~~ 86 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLTNPLFLEEAQLSLNDG 86 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTTCHHHHHHHHHHHHHC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCCChHHHHHHHhCCCCc
Confidence 4579999999999999999999999 99999999999999998865336899999999998653 346667777775221
Q ss_pred ---ccccccceeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhhhcCchhhhccCCccHH
Q 009678 134 ---LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQ 210 (529)
Q Consensus 134 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 210 (529)
..+....... ....... ........ +..+ ...+........ . .....++.++.
T Consensus 87 ~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~---~~~~------------~~~~~~~~~~~~--~-~~~~~~d~s~~ 142 (516)
T 1rsg_A 87 RTRFVFDDDNFIY-IDEERGR-----VDHDKELL---LEIV------------DNEMSKFAELEF--H-QHLGVSDCSFF 142 (516)
T ss_dssp CCCEECCCCCCEE-EETTTEE-----CTTCTTTC---HHHH------------HHHHHHHHHHHC----------CCBHH
T ss_pred ceeEEECCCCEEE-EcCCCcc-----ccccHHHH---HHHH------------HHHHHHHHHHHh--h-hccCCCCCCHH
Confidence 1111111110 0000000 00000000 1110 000000000000 0 00112346777
Q ss_pred HHHHHc------CCChHHHHHHHHHHHh---hcCCCCCccccHHHHHHHHHHHhhhccCCeeeeecCCCCccchHHHHHH
Q 009678 211 EWMRKQ------GVPDRVTTEVFIAMSK---ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEH 281 (529)
Q Consensus 211 ~~l~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~l~~~l~~~ 281 (529)
+++.+. .+... ...++..+.. ...+...++++.... +....+ ...++.+ ++.+++.|++.
T Consensus 143 ~~l~~~l~~~~~~l~~~-~~~~~~~~~~~~~~~~g~~~~~~s~~~~-------~~~~~~-~~~~~~g--~~~l~~~l~~~ 211 (516)
T 1rsg_A 143 QLVMKYLLQRRQFLTND-QIRYLPQLCRYLELWHGLDWKLLSAKDT-------YFGHQG-RNAFALN--YDSVVQRIAQS 211 (516)
T ss_dssp HHHHHHHHHHGGGSCHH-HHHHHHHHHGGGHHHHTBCTTTSBHHHH-------CCCCSS-CCEEESC--HHHHHHHHHTT
T ss_pred HHHHHHHHHhhcccCHH-HHHHHHHHHHHHHHHhCCChHHCChHHH-------HhhccC-cchhhhC--HHHHHHHHHHh
Confidence 776542 11111 1112222221 122344555555432 111112 1223433 45555555554
Q ss_pred HHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhh-----------CCCchhhhHHHHHhhc
Q 009678 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ-----------LPENWKEMAYFKRLEK 350 (529)
Q Consensus 282 l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l-----------~~~~~~~~~~~~~~~~ 350 (529)
+. +++|++|++|++|..++++.+ .|++.+|++++||+||+|+|+..++.. ...+..|..+.+++++
T Consensus 212 l~--~~~i~~~~~V~~I~~~~~~~v-~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~ 288 (516)
T 1rsg_A 212 FP--QNWLKLSCEVKSITREPSKNV-TVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDK 288 (516)
T ss_dssp SC--GGGEETTCCEEEEEECTTSCE-EEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTS
T ss_pred CC--CCEEEECCEEEEEEEcCCCeE-EEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHh
Confidence 43 257999999999997433333 688999988999999999999988642 1112235566788999
Q ss_pred CCCcCeEEEEEEecCCcccccC-ccccc-C---Ccceeeeccc--------------------ccc--c----c-ccCCC
Q 009678 351 LVGVPVINIHIWFDRKLKNTYD-HLLFS-S---SLLSVYADMS--------------------LTC--K----E-YYNPN 398 (529)
Q Consensus 351 ~~~~~~~~v~l~~~~~~~~~~~-~~~~~-~---~~~~~~~~~s--------------------~~~--~----~-~~~~~ 398 (529)
+.+.++.||++.|+++||+... .+... + +....+...+ ..+ + . ....+
T Consensus 289 ~~~~~~~Kv~l~f~~~fW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (516)
T 1rsg_A 289 IHFGALGKVIFEFEECCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLFFVNLSKSTG 368 (516)
T ss_dssp SCCCCCEEEEEEESSCCSCCSCSEEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEEEEEHHHHTS
T ss_pred CCCCcceEEEEEeCCCCCCCCCCcEEEeCCCCccchhhcccCcccchhhhcccccccccccccccccCceeEEEeeecCC
Confidence 9999999999999999997532 21111 1 1000000000 000 0 0 01223
Q ss_pred CceEEEE-ecCc-cccCCC--ChHHHHH---HHHHHHHHhCCC-----Ccc-cc-------ccccEEEEEEEeccCC--c
Q 009678 399 QSMLELV-FAPA-EEWISC--SDSEIID---ATMKELAKLFPD-----EIS-AD-------QSKAKIVKYHVVKTPR--S 456 (529)
Q Consensus 399 ~~~l~~~-~~~~-~~~~~~--~~~~~~~---~~l~~l~~~~p~-----~~~-~~-------~~~~~~~~~~~~~~p~--~ 456 (529)
..++..+ ..+. ..+..+ +++++.+ .++++|.++|+. ... ++ +....++..+|...|+ |
T Consensus 369 ~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~dp~~~G 448 (516)
T 1rsg_A 369 VASFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYSRG 448 (516)
T ss_dssp CSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTTCTTTTT
T ss_pred CcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCCCCCCCCc
Confidence 4444433 3332 334455 7777754 467777777752 111 10 1111345556666666 4
Q ss_pred cccc-CCCCCCC--CCCCC-CCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhhH
Q 009678 457 VYKT-IPNCEPC--RPLQR-SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 514 (529)
Q Consensus 457 ~~~~-~~~~~~~--~~~~~-~~~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i~~~l~~~ 514 (529)
.|.+ .|+.... ...+. .+.++|||||++++..|.|+|+||+.||+++|++|++.++..
T Consensus 449 sys~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~~~ 510 (516)
T 1rsg_A 449 AYSACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLE 510 (516)
T ss_dssp CCCCCBC----CHHHHHHHHCSSSSEEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHHGG
T ss_pred cCCCcCCCCCHHHHHHHhccCCCCcEEEeccccccCCCccchhHHHHHHHHHHHHHHHhhhh
Confidence 4543 3443211 11122 367899999999998888999999999999999999988654
No 18
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.97 E-value=2.2e-31 Score=282.60 Aligned_cols=409 Identities=19% Similarity=0.236 Sum_probs=235.8
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccCCCCeeeeeeeeecCCcch-HHHHHHHcCCCCc
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPN-IQNLFGELGINDR 133 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~-~~~l~~~lg~~~~ 133 (529)
...+||+|||||++||+||+.|++.|++|+|+|+++++||++.+....+|..+|.|++++.+...+ +..+.+++|++..
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~~~np~~~l~~~lGl~~~ 413 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMH 413 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCSTTCCEESSCCEEECCTTCHHHHHHHHHTCCCE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccccCCeEeccCCeEEeCCccChHHHHHHHhCCccc
Confidence 356899999999999999999999999999999999999999987666789999999999865544 6788899998643
Q ss_pred ccccccceeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhhhcCchhhhccCCcc-----
Q 009678 134 LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLT----- 208 (529)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s----- 208 (529)
...... .++. ..+. .... ........ .+.........+.. . .......+
T Consensus 414 ~~~~~~-~l~~---~~g~---------~~~~--~~~~~~~~----~~~~ll~~~~~~~~----~---~~~~~d~sl~~~~ 467 (776)
T 4gut_A 414 KFGERC-DLIQ---EGGR---------ITDP--TIDKRMDF----HFNALLDVVSEWRK----D---KTQLQDVPLGEKI 467 (776)
T ss_dssp ECCSCC-CEEC---TTSC---------BCCH--HHHHHHHH----HHHHHHHHHHHHGG----G---CCGGGCCBHHHHH
T ss_pred cccccc-ceEc---cCCc---------ccch--hHHHHHHH----HHHHHHHHHHHHhh----c---ccccccccHHHHH
Confidence 211110 0110 0111 0000 00000000 00000000000000 0 00001122
Q ss_pred ---HHHHHHHcCCChHHHHHH-H---HHHHhhcCCCCCccccHHHHHHHHHHHhhhccCCeeeeecCCCCccchHHHHHH
Q 009678 209 ---VQEWMRKQGVPDRVTTEV-F---IAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEH 281 (529)
Q Consensus 209 ---~~~~l~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~l~~~l~~~ 281 (529)
+.++++..++........ + ........+.....++...... ...+ ...+....++.++ ...+++.++
T Consensus 468 ~~~~~~~l~~~gv~~~~l~~~~l~~~~~~l~~~~G~~l~~ls~~~~~~--~~~~-~~~~G~~~~~~~G-~~~l~~aLa-- 541 (776)
T 4gut_A 468 EEIYKAFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDH--NEFF-AQFAGDHTLLTPG-YSVIIEKLA-- 541 (776)
T ss_dssp HHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHTSCTTSBBTTTTTG--GGGS-CCCCSCEEECTTC-THHHHHHHH--
T ss_pred HHHHHHHHHhcCCCccchhHHHHHHHHHHHHHhcCCChHHcChhhhhh--hhhH-HhcCCCeEEECCh-HHHHHHHHH--
Confidence 334444444332211110 0 0001111112222222210000 0000 1122223334433 444444443
Q ss_pred HHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhC--CCchhhhHHHHHhhcCCCcCeEEE
Q 009678 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL--PENWKEMAYFKRLEKLVGVPVINI 359 (529)
Q Consensus 282 l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~v 359 (529)
.|++|+++++|++|+.++++ + .|++.+|++++||+||+|+|...++... ..+..+....+++.++.+.++.|+
T Consensus 542 ---~gl~I~l~t~V~~I~~~~~~-v-~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV 616 (776)
T 4gut_A 542 ---EGLDIQLKSPVQCIDYSGDE-V-QVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKI 616 (776)
T ss_dssp ---TTSCEESSCCEEEEECSSSS-E-EEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEE
T ss_pred ---hCCcEEcCCeeEEEEEcCCE-E-EEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEE
Confidence 37899999999999985554 4 5888899889999999999999987521 122234556688888888999999
Q ss_pred EEEecCCccccc-Cc-cccc--C------CcceeeeccccccccccCCC-CceEEEEecC--ccccCCCChHHHHHHHHH
Q 009678 360 HIWFDRKLKNTY-DH-LLFS--S------SLLSVYADMSLTCKEYYNPN-QSMLELVFAP--AEEWISCSDSEIIDATMK 426 (529)
Q Consensus 360 ~l~~~~~~~~~~-~~-~~~~--~------~~~~~~~~~s~~~~~~~~~~-~~~l~~~~~~--~~~~~~~~~~~~~~~~l~ 426 (529)
.+.|+++||... .+ -.+. . .....+.+ ..+++ ..++..++.+ ...+..++++++++.+++
T Consensus 617 ~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d-------~~p~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~l~ 689 (776)
T 4gut_A 617 ALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYD-------MDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMA 689 (776)
T ss_dssp EEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEE-------SCTTSCSCEEEEEECTHHHHHHHTSCHHHHHHHHHH
T ss_pred EEecCcccccccCCCCceEEeecCCcCCCceEEEEec-------CCCCCCceEEEEEecchhHHHHHcCCHHHHHHHHHH
Confidence 999999999741 11 0111 0 11111211 12333 3455444433 255678899999999999
Q ss_pred HHHHhCCCCccccccccEEEEEEEeccCC--cccccC-CCC-CCCCCCCCCC-CCCeEEecccccCCCCCchHHHHHHHH
Q 009678 427 ELAKLFPDEISADQSKAKIVKYHVVKTPR--SVYKTI-PNC-EPCRPLQRSP-VEGFYLAGDYTKQKYLASMEGAVLSGK 501 (529)
Q Consensus 427 ~l~~~~p~~~~~~~~~~~~~~~~~~~~p~--~~~~~~-~~~-~~~~~~~~~~-~~~l~~aG~~~~~~~~~~~~gA~~Sg~ 501 (529)
+|.++||....+.+ ..+...+|...|+ |.|.+. ++. ....+.+..| .++|||||++++..|.|+|+||+.||+
T Consensus 690 ~L~~ifg~~~~~~P--~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~Ts~~~~gtveGAi~SG~ 767 (776)
T 4gut_A 690 TLRELFKEQEVPDP--TKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGV 767 (776)
T ss_dssp HHHHHTTTSCCCCC--SEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECSGGGCSSSCSSHHHHHHHHH
T ss_pred HHHHHhCcccccCc--ceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEehhhcCCCCcCHHHHHHHHH
Confidence 99999986322221 2344455655555 444332 232 1111223345 489999999999888899999999999
Q ss_pred HHHHHHHH
Q 009678 502 LCAQAIVQ 509 (529)
Q Consensus 502 ~aA~~i~~ 509 (529)
++|++|++
T Consensus 768 RaA~~Ila 775 (776)
T 4gut_A 768 REASKIAA 775 (776)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99999974
No 19
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.97 E-value=5.3e-30 Score=261.21 Aligned_cols=414 Identities=15% Similarity=0.154 Sum_probs=266.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC-CCeEEEeccccCCceeEeeccCCCCeeeeeeeeecCCcchHHHHHHHcCCCCcc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g-~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~ 134 (529)
..+||+|||||++||+||++|+++| .+|+|+|+++++||++.+....+|+.+|.|++++...+..+.++++++. +...
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~~~-~~~~ 86 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFSHYQYFDDVMDWAV-QGWN 86 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCCSBHHHHHHHHHHC-SCEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCcccccChHHHHHHHHHHh-hhhh
Confidence 5689999999999999999999998 7999999999999999986446899999999999887778889998875 2211
Q ss_pred cccccceeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhhhcCchhhhccCCccHHHHHH
Q 009678 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (529)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (529)
.......++ . .+.+..+.+.. . . ..+......+....++.... .....+..++.+|+.
T Consensus 87 ~~~~~~~~~-~---~g~~~~~P~~~-~---~----------~~l~~~~~~~~~~~ll~~~~----~~~~~~~~s~~e~~~ 144 (484)
T 4dsg_A 87 VLQRESWVW-V---RGRWVPYPFQN-N---I----------HRLPEQDRKRCLDELVRSHA----RTYTEPPNNFEESFT 144 (484)
T ss_dssp EEECCCEEE-E---TTEEEESSGGG-C---G----------GGSCHHHHHHHHHHHHHHHH----CCCSSCCSSHHHHHH
T ss_pred hccCceEEE-E---CCEEEEeCccc-h---h----------hhCCHHHHHHHHHHHHHHHh----ccCCCCCCCHHHHHH
Confidence 111111111 1 12111111000 0 0 01111122222212221100 012235689999999
Q ss_pred HcCCChHHHHHHHHHHHhhcCCCCCccccHHHH---------HHHHHHHhhhcc------CCeeeeec-CCCCccchHHH
Q 009678 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCI---------LIALNRFLQEKH------GSKMAFLD-GNPPERLCLPI 278 (529)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~------g~~~~~~~-g~~~~~l~~~l 278 (529)
++ +..++.+.++.++....++.++++++.... ...+...+.... ...+.|+. || +..+++.|
T Consensus 145 ~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG-~~~l~~~l 222 (484)
T 4dsg_A 145 RQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGG-TGIIYQAI 222 (484)
T ss_dssp HH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSC-THHHHHHH
T ss_pred HH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCC-HHHHHHHH
Confidence 87 666777777888888888888888765321 111222222111 12234443 44 88999999
Q ss_pred HHHHHHcCcEEEec--ceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCC--chhhhHHHHHhhcCCCc
Q 009678 279 VEHIQSLGGEVRLN--SRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPE--NWKEMAYFKRLEKLVGV 354 (529)
Q Consensus 279 ~~~l~~~G~~i~~~--t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~ 354 (529)
++.+.+. +|+++ ++|++|..+ ++. |++.+|+++.||+||+|+|++.+..++.+ ...+....+.+..+.+.
T Consensus 223 a~~l~~~--~i~~~~~~~V~~I~~~-~~~---v~~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~ 296 (484)
T 4dsg_A 223 KEKLPSE--KLTFNSGFQAIAIDAD-AKT---ITFSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYS 296 (484)
T ss_dssp HHHSCGG--GEEECGGGCEEEEETT-TTE---EEETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEE
T ss_pred HhhhhhC--eEEECCCceeEEEEec-CCE---EEECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcC
Confidence 9887653 78899 569999974 442 55688888999999999999999988754 11244556778889999
Q ss_pred CeEEEEEEecCCcccc---cCcccccCC--cceeeeccccccccccCCCCceEEEEecCccccCCCChHHHHHHHHHHHH
Q 009678 355 PVINIHIWFDRKLKNT---YDHLLFSSS--LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELA 429 (529)
Q Consensus 355 ~~~~v~l~~~~~~~~~---~~~~~~~~~--~~~~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~ 429 (529)
++.++++.|+.+.... ...+.++++ .+......++.++...|++.+++...+.....| ..+++++++.++++|.
T Consensus 297 s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~~~~-~~~d~~l~~~a~~~L~ 375 (484)
T 4dsg_A 297 STNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSESKYK-PVNHSTLIEDCIVGCL 375 (484)
T ss_dssp EEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEBTTB-CCCTTSHHHHHHHHHH
T ss_pred ceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecCcCC-cCCHHHHHHHHHHHHH
Confidence 9999999998864221 122233321 112222334455666677776665444433334 6789999999999999
Q ss_pred HhCCCCccccccccEEEEEEEeccCCcccccCCCCCC----CCCCCCCCCCCeEEecccccCCCC-CchHHHHHHHHHHH
Q 009678 430 KLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYTKQKYL-ASMEGAVLSGKLCA 504 (529)
Q Consensus 430 ~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~l~~aG~~~~~~~~-~~~~gA~~Sg~~aA 504 (529)
++..-. +. ..+......+|+.+.+.+.++... .++.+. .. ||+++|......|. .+++.|+.||++||
T Consensus 376 ~~~~~~-~~----~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~-~~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa 448 (484)
T 4dsg_A 376 ASNLLL-PE----DLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELM-SR-CIYSRGRFGAWRYEVGNQDHSFMQGVEAI 448 (484)
T ss_dssp HTTSCC-TT----CCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHH-HT-TEEECSTTTTCCGGGCSHHHHHHHHHHHH
T ss_pred HcCCCC-cc----ceEEEEEEEEeCccccCCCccHHHHHHHHHHHHH-hC-CcEeecCCcccccCCCChHHHHHHHHHHH
Confidence 985321 11 123445567788888887776322 112122 23 99999997666542 37999999999999
Q ss_pred HHHH
Q 009678 505 QAIV 508 (529)
Q Consensus 505 ~~i~ 508 (529)
+.|+
T Consensus 449 ~~i~ 452 (484)
T 4dsg_A 449 DHVL 452 (484)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 9997
No 20
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.96 E-value=8.5e-29 Score=264.21 Aligned_cols=240 Identities=18% Similarity=0.215 Sum_probs=155.8
Q ss_pred ecCCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcC------CcEEecCEEEEccCHHHHhhhCC---
Q 009678 266 LDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------GNVIDGDAYVFATPVDILKLQLP--- 336 (529)
Q Consensus 266 ~~g~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~------G~~i~ad~VI~a~~~~~~~~l~~--- 336 (529)
+.|| ++.|++.|++ +++|++|++|++|..++++. .|++.+ |++++||+||+|+|..+++.++.
T Consensus 567 ~~gG-~~~L~~aLa~-----~l~I~Lnt~V~~I~~~~~gV--~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~ 638 (852)
T 2xag_A 567 VRNG-YSCVPVALAE-----GLDIKLNTAVRQVRYTASGC--EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQ 638 (852)
T ss_dssp ETTC-TTHHHHHHTT-----TCCEECSEEEEEEEEETTEE--EEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCSSE
T ss_pred ecCc-HHHHHHHHHh-----CCCEEeCCeEEEEEEcCCcE--EEEEeecccCCCCeEEECCEEEECCCHHHHHhhhcccc
Confidence 3444 6777766664 35799999999999865543 466654 56799999999999999987421
Q ss_pred -CchhhhHHHHHhhcCCCcCeEEEEEEecCCccccc-Cccccc------CCcceeeeccccccccccCCCCceEEEEec-
Q 009678 337 -ENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY-DHLLFS------SSLLSVYADMSLTCKEYYNPNQSMLELVFA- 407 (529)
Q Consensus 337 -~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~-~~~~~~------~~~~~~~~~~s~~~~~~~~~~~~~l~~~~~- 407 (529)
.+..|....++++++.+.++.||++.|+++||... ....+. ...+..+++.. +..++.+++.
T Consensus 639 F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~~~---------~~pvLl~~v~G 709 (852)
T 2xag_A 639 FVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY---------KAPILLALVAG 709 (852)
T ss_dssp EESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSSTTTTTTCEEEECS---------SSSEEEEEECH
T ss_pred cCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccCCCCceEEEecCC---------CCCEEEEEecC
Confidence 22234455678899999999999999999999742 211111 01112221111 2224443333
Q ss_pred C-ccccCCCChHHHHHHHHHHHHHhCCCCccccccccEEEEEEEeccCC--ccccc-CCCCCC-C-------------CC
Q 009678 408 P-AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPR--SVYKT-IPNCEP-C-------------RP 469 (529)
Q Consensus 408 ~-~~~~~~~~~~~~~~~~l~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~--~~~~~-~~~~~~-~-------------~~ 469 (529)
. ...+..++++++++.++++|.++||....+++ ..+...+|...|+ |.|.+ .++... . ++
T Consensus 710 ~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P--~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p 787 (852)
T 2xag_A 710 EAAGIMENISDDVIVGRCLAILKGIFGSSAVPQP--KETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIP 787 (852)
T ss_dssp HHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCC--SEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSST
T ss_pred cCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCc--eEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccccccc
Confidence 2 24566789999999999999999986432221 2233444544444 34543 234211 0 12
Q ss_pred CCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhhHHhhccccccc
Q 009678 470 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAE 524 (529)
Q Consensus 470 ~~~~~~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i~~~l~~~~~~~~~~~~~ 524 (529)
....+.++|||||++++..|.++|+||+.||+++|++|++.+.........+.+|
T Consensus 788 ~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~~~~~~~~~~~~~ 842 (852)
T 2xag_A 788 GAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQATP 842 (852)
T ss_dssp TCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHHCCGGGC------
T ss_pred cccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCC
Confidence 2345668999999999988889999999999999999999997655555444444
No 21
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.96 E-value=5.6e-28 Score=236.40 Aligned_cols=221 Identities=15% Similarity=0.126 Sum_probs=151.5
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCch--hhhHHHHHh
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENW--KEMAYFKRL 348 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~--~~~~~~~~~ 348 (529)
+..+++.|++.+ |++|+++++|++|+.++++ + .|++.+|++++||.||+|+|+..+..|+++.. .+......+
T Consensus 111 ~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~~-~-~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l 185 (342)
T 3qj4_A 111 ISSIIKHYLKES---GAEVYFRHRVTQINLRDDK-W-EVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQL 185 (342)
T ss_dssp TTHHHHHHHHHH---TCEEESSCCEEEEEECSSS-E-EEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHHH
T ss_pred HHHHHHHHHHhc---CCEEEeCCEEEEEEEcCCE-E-EEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHHH
Confidence 667777777655 8999999999999986555 3 58888887799999999999999999987532 233456888
Q ss_pred hcCCCcCeEEEEEEecCCcccc--cCccccc-CCcce-eeecccccccc-ccCCCCceEEEEecC--ccccCCCChHHHH
Q 009678 349 EKLVGVPVINIHIWFDRKLKNT--YDHLLFS-SSLLS-VYADMSLTCKE-YYNPNQSMLELVFAP--AEEWISCSDSEII 421 (529)
Q Consensus 349 ~~~~~~~~~~v~l~~~~~~~~~--~~~~~~~-~~~~~-~~~~~s~~~~~-~~~~~~~~l~~~~~~--~~~~~~~~~~~~~ 421 (529)
..+.+.++.++.+.|++++|.. +.+..+. .+.+. ++.+.+. +. ..+++..++....+. ..++.+.+++++.
T Consensus 186 ~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k--~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 263 (342)
T 3qj4_A 186 EAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKK--RNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQ 263 (342)
T ss_dssp HTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHH--TTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHH
T ss_pred hcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccC--CCCCCCCCCceEEEECCHHHHHHhhcCCHHHHH
Confidence 9999999999999999887643 3333333 33223 2233222 11 112222233222222 1456678999999
Q ss_pred HHHHHHHHHhCCCCccccccccEEEEEEEeccCCcccccCCCCCCCCCCCC--CCCCCeEEecccccCCCCCchHHHHHH
Q 009678 422 DATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQR--SPVEGFYLAGDYTKQKYLASMEGAVLS 499 (529)
Q Consensus 422 ~~~l~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~l~~aG~~~~~~~~~~~~gA~~S 499 (529)
+.++++|.+++|.... +...+..+|+++.+.+... .++... ...++|++||||+.+ ++||+|+.|
T Consensus 264 ~~~~~~l~~~~g~~~~-------p~~~~v~rW~~a~p~~~~~---~~~~~~~~~~~~~l~laGd~~~g---~~v~~ai~s 330 (342)
T 3qj4_A 264 ELVFQQLENILPGLPQ-------PIATKCQKWRHSQVTNAAA---NCPGQMTLHHKPFLACGGDGFTQ---SNFDGCITS 330 (342)
T ss_dssp HHHHHHHHHHSCSCCC-------CSEEEEEEETTCSBSSCCS---SSCSCEEEETTTEEEECSGGGSC---SSHHHHHHH
T ss_pred HHHHHHHHHhccCCCC-------CceeeeccccccccccccC---CCcceeEecCCccEEEEccccCC---CCccHHHHH
Confidence 9999999999985322 2345567777877654321 112112 356899999999976 699999999
Q ss_pred HHHHHHHHHHHH
Q 009678 500 GKLCAQAIVQDY 511 (529)
Q Consensus 500 g~~aA~~i~~~l 511 (529)
|+++|++|++.|
T Consensus 331 g~~aa~~i~~~l 342 (342)
T 3qj4_A 331 ALCVLEALKNYI 342 (342)
T ss_dssp HHHHHHHHTTC-
T ss_pred HHHHHHHHHhhC
Confidence 999999997653
No 22
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.96 E-value=4.3e-28 Score=256.26 Aligned_cols=224 Identities=19% Similarity=0.234 Sum_probs=148.8
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcC------CcEEecCEEEEccCHHHHhhhC----CCchh
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------GNVIDGDAYVFATPVDILKLQL----PENWK 340 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~------G~~i~ad~VI~a~~~~~~~~l~----~~~~~ 340 (529)
++.|++.|++ +++|++|++|++|..++++. .|++.+ |++++||+||+|+|...++.+. ..+..
T Consensus 400 ~~~l~~~La~-----~l~I~l~~~V~~I~~~~~~v--~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~f~P~L 472 (662)
T 2z3y_A 400 YSCVPVALAE-----GLDIKLNTAVRQVRYTASGC--EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPL 472 (662)
T ss_dssp TTHHHHHHTT-----TCEEETTEEEEEEEEETTEE--EEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCC
T ss_pred HHHHHHHHHh-----cCceecCCeEEEEEECCCcE--EEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCceEEcCCC
Confidence 6677666654 46899999999999865553 466655 5679999999999999998742 12223
Q ss_pred hhHHHHHhhcCCCcCeEEEEEEecCCccccc-CcccccC------CcceeeeccccccccccCCCCceEEEEecC--ccc
Q 009678 341 EMAYFKRLEKLVGVPVINIHIWFDRKLKNTY-DHLLFSS------SLLSVYADMSLTCKEYYNPNQSMLELVFAP--AEE 411 (529)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~-~~~~~~~------~~~~~~~~~s~~~~~~~~~~~~~l~~~~~~--~~~ 411 (529)
|....++++++.+.++.||++.|+++||... ....+.. +.+..+++. .+..++..++.+ ...
T Consensus 473 P~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~---------~~~~vL~~~~~G~~a~~ 543 (662)
T 2z3y_A 473 PEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNL---------YKAPILLALVAGEAAGI 543 (662)
T ss_dssp CHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEECC---------SSSSEEEEEECTHHHHH
T ss_pred CHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEeC---------CCCCEEEEEeccHhHHH
Confidence 4456678899999999999999999999742 1111110 111111111 022344443332 245
Q ss_pred cCCCChHHHHHHHHHHHHHhCCCCccccccccEEEEEEEeccCC--ccccc-CCCCCC--------------CCCCCCCC
Q 009678 412 WISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPR--SVYKT-IPNCEP--------------CRPLQRSP 474 (529)
Q Consensus 412 ~~~~~~~~~~~~~l~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~--~~~~~-~~~~~~--------------~~~~~~~~ 474 (529)
+..++++++++.++++|.++||....+++ ..+...+|...|+ |.|.+ .|+... .++...++
T Consensus 544 ~~~lsdee~~~~~l~~L~~~~g~~~~~~p--~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~ 621 (662)
T 2z3y_A 544 MENISDDVIVGRCLAILKGIFGSSAVPQP--KETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQP 621 (662)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHCTTSSCCC--SEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC---------C
T ss_pred HHhCCHHHHHHHHHHHHHHHhCCcccCCC--ceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCccccccccccCC
Confidence 66789999999999999999986432221 2233444554444 34443 233211 01223456
Q ss_pred CCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHh
Q 009678 475 VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 512 (529)
Q Consensus 475 ~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i~~~l~ 512 (529)
.++|||||++++..|.++|+||+.||++||++|++.+.
T Consensus 622 ~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 622 IPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp CCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHcc
Confidence 68999999999988889999999999999999998774
No 23
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.96 E-value=2.1e-28 Score=253.84 Aligned_cols=447 Identities=13% Similarity=0.079 Sum_probs=245.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC--------CCeEEEeccc-cC----------------CceeEeeccC------CCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAG--------HKPLLLEARD-VL----------------GGKIAAWKDG------DGD 105 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g--------~~V~llEa~~-~~----------------GG~~~~~~~~------~g~ 105 (529)
.++|+|||||++||+||+.|++.| ++|+|||+++ ++ ||++.+.... .+.
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~~~~~~g~~~~~~~g~~GGr~~t~~~~~~~~~~~~~ 135 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSFLHDRPGIKAIKVRGLKAGRVSAALVHNGDPASGDT 135 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBGGGCC----CEECTTCEETTEEEEEECSSCGGGCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCcccccccchhhHHHhcCcCCceEEEEEccCCcccCCCc
Confidence 479999999999999999999998 9999999999 99 9999887542 468
Q ss_pred eeeeeeeeecCCcchHHHHHHHc-CCCCc--ccccc--cceeeecCC----CCCCc-ccccCCCC-CCCchhHHHHHHhc
Q 009678 106 WYETGLHIFFGAYPNIQNLFGEL-GINDR--LQWKE--HSMIFAMPN----KPGEF-SRFDFPEV-LPAPLNGILAILRN 174 (529)
Q Consensus 106 ~~d~G~~~~~~~~~~~~~l~~~l-g~~~~--~~~~~--~~~~~~~~~----~~~~~-~~~~~~~~-~~~~~~~~~~~~~~ 174 (529)
.+|.|++++...+..+.++++++ |++.. ..... ....+.... ..+.. ..+..... .+.....+...+..
T Consensus 136 ~~e~G~~~~~~~~~~~~~~~~~l~gl~~~~~~~~~~~~~~~~i~~~~~i~~~~g~~~~~~~~~~~p~p~~~~~v~~~~~~ 215 (721)
T 3ayj_A 136 IYEVGAMRFPEIAGLTWHYASAAFGDAAPIKVFPNPGKVPTEFVFGNRVDRYVGSDPKDWEDPDSPTLKVLGVVAGGLVG 215 (721)
T ss_dssp EEECSCCCEETTCHHHHHHHHHHHCTTCBCCBCCCBTTBCEEEEETTEEEEESSSCGGGBSSTTCHHHHHHHHHHHHHTC
T ss_pred EEecCCEEecCccHHHHHHHHHhcCCcccccccccCCCCceEEEecCceeeecCccceecccccccCHHHHHHHHHHHHH
Confidence 89999999998888889999999 98631 11111 112221000 00110 00000000 00001111111110
Q ss_pred CCC------CC----hHHHHHH-hhc------------------chhh------hhcCchhh-hccCCccH---HHHHHH
Q 009678 175 NEM------LT----WPEKVKF-AIG------------------LLPA------IIGGQAYV-EAQDGLTV---QEWMRK 215 (529)
Q Consensus 175 ~~~------~~----~~~~~~~-~~~------------------~~~~------~~~~~~~~-~~~~~~s~---~~~l~~ 215 (529)
... .. .+.++.. +.. .+.. ...+...+ .+++..++ .+|++.
T Consensus 216 ~~~e~~~~~~~~~~~~p~~v~~ll~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~w~~lla~~~d~~S~~~~~~~L~~ 295 (721)
T 3ayj_A 216 NPQGENVAMYPIANVDPAKIAAILNAATPPADALERIQTKYWPEFIAQYDGLTLGAAVREIVTVAFEKGTLPPVDGVLDV 295 (721)
T ss_dssp CSSSSCCCSSCBTTBCHHHHHHHHTCSSCCHHHHHHHHHTHHHHHHHHHTTBBHHHHHHHHHHHHHHHTSSCCGGGTSCH
T ss_pred HhhhcccccccccccchhhHHHHHHhhhcchhhhhhhhhhhhhhhhhhhccchhhhHHHHHHHHhhcccchhHHHHHHHh
Confidence 000 00 0000000 000 0000 00000000 12222333 333321
Q ss_pred cCCChHHHHHHHHHHHhhc---CC-CCCccccHHHHHHHHHHHhhhccCCeeeeecCCCCccchHHHHHHHHHcCcEEEe
Q 009678 216 QGVPDRVTTEVFIAMSKAL---NF-INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRL 291 (529)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~l~~~l~~~l~~~G~~i~~ 291 (529)
. ..+. .....+.... .+ ......+....+... +. ..+..+..+.|| ++.|+++|++.+.+ |..|++
T Consensus 296 ~---~~~s-~~~~~~~~~~~~~gg~~~~~~~S~le~L~~~---~~-~~~~~~~~i~GG-~~~L~~aLa~~l~~-g~~I~l 365 (721)
T 3ayj_A 296 D---ESIS-YYVELFGRFGFGTGGFKPLYNISLVEMMRLI---LW-DYSNEYTLPVTE-NVEFIRNLFLKAQN-VGAGKL 365 (721)
T ss_dssp H---HHHH-HHHHHHHHHCSSSSCCGGGTTBBHHHHHHHH---HT-TTTCEECCSSSS-THHHHHHHHHHHHH-HTTTSE
T ss_pred c---cccH-HHHHHHHHHhhccCCCCCccchhHHHHHHHH---hc-CCccceeEECCc-HHHHHHHHHHhccc-CCceEe
Confidence 0 0111 1111111111 11 122345554433322 11 234445556666 89999999998753 457889
Q ss_pred cceee--EEEecCCC-----CEEEE-EEcCCc--EEecCEEEEccCHHHHhh------hC-------C------------
Q 009678 292 NSRVQ--KIELNDDG-----TVKNF-LLTNGN--VIDGDAYVFATPVDILKL------QL-------P------------ 336 (529)
Q Consensus 292 ~t~V~--~I~~~~~~-----~~~~v-~~~~G~--~i~ad~VI~a~~~~~~~~------l~-------~------------ 336 (529)
+++|+ +|..++++ ..+.| .+.+|+ +++||+||+|+|...+.. +- .
T Consensus 366 ~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~ 445 (721)
T 3ayj_A 366 VVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAASQNLGDAGLGLETHTYN 445 (721)
T ss_dssp EEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEE
T ss_pred CCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHhhcccccccccccccccccccccccccccc
Confidence 99999 99986444 12356 456676 799999999999988853 21 1
Q ss_pred ---Cchh-h-------hHHHHHhhcCCCcCeEEEEEEe-----cCCcccccCcc----ccc-CCcceeeecccccccccc
Q 009678 337 ---ENWK-E-------MAYFKRLEKLVGVPVINIHIWF-----DRKLKNTYDHL----LFS-SSLLSVYADMSLTCKEYY 395 (529)
Q Consensus 337 ---~~~~-~-------~~~~~~~~~~~~~~~~~v~l~~-----~~~~~~~~~~~----~~~-~~~~~~~~~~s~~~~~~~ 395 (529)
++.. + ....++++++++.+..||.+.| +++||+...+. .+. .+...++.-.++....+.
T Consensus 446 ~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~~g~~i~~s~TD~~~r~~~~~p~p~~~d~~ 525 (721)
T 3ayj_A 446 QVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQWRGEPIKAVVSDSGLAASYVVPSPIVEDGQ 525 (721)
T ss_dssp EEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEETTEECCEEEETTTTEEEEEEECSCC----
T ss_pred ccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccccCCCCceeeecCCCcceEEEeccCcccccC
Confidence 1112 4 5667889999999999999999 99999864221 111 222222211111001222
Q ss_pred CCCCceEEEEec--C-cccc------CCCChHH-------HHHHHHHHHH--HhCCCCcc----------ccccccEEEE
Q 009678 396 NPNQSMLELVFA--P-AEEW------ISCSDSE-------IIDATMKELA--KLFPDEIS----------ADQSKAKIVK 447 (529)
Q Consensus 396 ~~~~~~l~~~~~--~-~~~~------~~~~~~~-------~~~~~l~~l~--~~~p~~~~----------~~~~~~~~~~ 447 (529)
+++..++...|. + ...| ..+++++ +++.++++|. +++|+... ..........
T Consensus 526 ~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~la~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~ 605 (721)
T 3ayj_A 526 APEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRAYRYVKYAGASNAQPWWFYQLLAEARTADRFV 605 (721)
T ss_dssp CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHTCCEECCTTCSSCEECHHHHHHHTSCSTTCEE
T ss_pred CCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHHhhhccCccccccccchhhhhhhhcccCceEE
Confidence 344444433332 2 2344 3333333 4999999999 88886320 0000123466
Q ss_pred EEEeccCC-cccc-cCCCC-------CCCC--CCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhhH
Q 009678 448 YHVVKTPR-SVYK-TIPNC-------EPCR--PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 514 (529)
Q Consensus 448 ~~~~~~p~-~~~~-~~~~~-------~~~~--~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i~~~l~~~ 514 (529)
+.|...|. |.|. +.|+. ..+. .....+.++||||||+++. +.||+|||+.||++||..|...++..
T Consensus 606 ~dW~~dps~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe~~S~-~~GWieGAl~Sa~~Aa~~i~~~~~~~ 682 (721)
T 3ayj_A 606 FDWTTNKTAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASDSYSH-LGGWLEGAFMSALNAVAGLIVRANRG 682 (721)
T ss_dssp EEGGGSTTSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSGGGSS-CTTSHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EeCCCCCCCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeehhhcc-CCceehHHHHHHHHHHHHHHHHhcCC
Confidence 77877772 2222 23443 1111 1233467899999999985 57899999999999999999998764
No 24
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.95 E-value=1.4e-26 Score=233.66 Aligned_cols=405 Identities=15% Similarity=0.160 Sum_probs=222.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC-CCeEEEeccccCCceeEeeccCCCCeeeeeeeeecCCcchHHHHHHHcCCCCcc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g-~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~ 134 (529)
.++||+|||||++||+||+.|+++| ++|+|+|+++++||++.+.. ..|+.+|.|++++...+..+.++++++|++...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~-~~G~~~d~G~~~~~~~~~~~~~l~~~~g~~~~~ 83 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPN-YHGRRYEMGAIMGVPSYDTIQEIMDRTGDKVDG 83 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCE-ETTEECCSSCCCBCTTCHHHHHHHHHHCCCCCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccC-CCCcccccCceeecCCcHHHHHHHHHhCCcccc
Confidence 5679999999999999999999999 89999999999999999875 478899999999887778899999999986431
Q ss_pred cccccceeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhhhcCc--hhhhccCCccHHHH
Q 009678 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQ--AYVEAQDGLTVQEW 212 (529)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~ 212 (529)
. .....+. ..++... .....+.....+...+. ................. .........++.+|
T Consensus 84 ~--~~~~~~~--~~~g~~~---~~~~~~~~~~~~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 148 (424)
T 2b9w_A 84 P--KLRREFL--HEDGEIY---VPEKDPVRGPQVMAAVQ--------KLGQLLATKYQGYDANGHYNKVHEDLMLPFDEF 148 (424)
T ss_dssp C--CCCEEEE--CTTSCEE---CGGGCTTHHHHHHHHHH--------HHHHHHHTTTTTTTSSSSSSCCCGGGGSBHHHH
T ss_pred c--cccceeE--cCCCCEe---ccccCcccchhHHHHHH--------HHHHHHhhhhhhcccccchhhhhhhhccCHHHH
Confidence 1 1111111 1112111 00000111000100000 00000000000000000 00112335899999
Q ss_pred HHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHH--HHhhhccCCeeeeecCCCCccchHHHHHHHHHcCcEEE
Q 009678 213 MRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALN--RFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVR 290 (529)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~g~~~~~l~~~l~~~l~~~G~~i~ 290 (529)
+++.+.. .+.+.+..++....+ .++.+.+....+..+. .......+..+. +.+| ...+++.|.+.+ +.+|+
T Consensus 149 l~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~g-~~~l~~~l~~~l---~~~v~ 221 (424)
T 2b9w_A 149 LALNGCE-AARDLWINPFTAFGY-GHFDNVPAAYVLKYLDFVTMMSFAKGDLWT-WADG-TQAMFEHLNATL---EHPAE 221 (424)
T ss_dssp HHHTTCG-GGHHHHTTTTCCCCC-CCTTTSBHHHHHHHSCHHHHHHHHHTCCBC-CTTC-HHHHHHHHHHHS---SSCCB
T ss_pred HHhhCcH-HHHHHHHHHHHhhcc-CChHhcCHHHHHHhhhHhhhhcccCCceEE-eCCh-HHHHHHHHHHhh---cceEE
Confidence 9998765 344433333333222 3566777655432211 111112233333 3344 677777776655 45789
Q ss_pred ecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCchhhhHHHHHhhcCCCcCeEEEEEEecCCcccc
Q 009678 291 LNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT 370 (529)
Q Consensus 291 ~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~ 370 (529)
++++|++|..+++ .+ .|++.+| +++||+||+|+|++.+..+++.... ..+.+.++.+.++. +.+.+...++.
T Consensus 222 ~~~~V~~i~~~~~-~v-~v~~~~g-~~~ad~Vv~a~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~- 293 (424)
T 2b9w_A 222 RNVDITRITREDG-KV-HIHTTDW-DRESDVLVLTVPLEKFLDYSDADDD---EREYFSKIIHQQYM-VDACLVKEYPT- 293 (424)
T ss_dssp CSCCEEEEECCTT-CE-EEEESSC-EEEESEEEECSCHHHHTTSBCCCHH---HHHHHTTCEEEEEE-EEEEEESSCCS-
T ss_pred cCCEEEEEEEECC-EE-EEEECCC-eEEcCEEEECCCHHHHhhccCCCHH---HHHHHhcCCcceeE-EEEEEeccCCc-
Confidence 9999999997544 44 4888888 5999999999999988777764321 12234445444432 22233333321
Q ss_pred cCccccc-C--C-cc--eeeeccccccccccCCC-CceEE-EEecCccccCCCChHHHHHHHHHHHHHhCCCCccccccc
Q 009678 371 YDHLLFS-S--S-LL--SVYADMSLTCKEYYNPN-QSMLE-LVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSK 442 (529)
Q Consensus 371 ~~~~~~~-~--~-~~--~~~~~~s~~~~~~~~~~-~~~l~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~p~~~~~~~~~ 442 (529)
...+ ++ + + .. .++... ..+++ ..++. ++......+...+++++.+.+++.|.++-++ .. .
T Consensus 294 ~~~~-~~~~~~~~~~g~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l~~~-~~-~--- 361 (424)
T 2b9w_A 294 ISGY-VPDNMRPERLGHVMVYYH------RWADDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFGHP-VE-K--- 361 (424)
T ss_dssp SEEE-CGGGGSGGGTTSCCEEEE------CCTTCTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHHTTCC-EE-E---
T ss_pred cccc-ccCCCCCcCCCcceEEee------ecCCCCceEEEEEeccCCCcccccChHHHHHHHHHHHHHcCCc-cc-c---
Confidence 1111 11 0 0 00 111110 01122 23333 3333345566778899999999999984332 11 1
Q ss_pred cEEEEEEEeccCC-cccccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHH
Q 009678 443 AKIVKYHVVKTPR-SVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 508 (529)
Q Consensus 443 ~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i~ 508 (529)
.+....|...|. +...+..+... +.....+.+||||||+++.. |.+|+|+.||+++|++|+
T Consensus 362 -~~~~~~w~~~p~~~~~~~~~G~~~-~~~~~~~~~~l~~aG~~~~~---g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 362 -IIEEQTWYYFPHVSSEDYKAGWYE-KVEGMQGRRNTFYAGEIMSF---GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp -EEEEEEEEEEEECCHHHHHTTHHH-HHHHTTTGGGEEECSGGGSC---SSHHHHHHHHHHHHHHHT
T ss_pred -cccccceeeeeccCHHHHhccHHH-HHHHHhCCCCceEecccccc---ccHHHHHHHHHHHHHHhc
Confidence 111122222221 11111111100 00112345799999999875 789999999999999875
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.93 E-value=2e-24 Score=210.87 Aligned_cols=325 Identities=17% Similarity=0.219 Sum_probs=198.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccCCCCeeeeeeeeecCCcchHHHHHHHcCCCCcc-c
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL-Q 135 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~-~ 135 (529)
++||+|||||++|+++|+.|++.|.+|+|||++..+||++.+.. ..+..++.|..++......+.++++++...... .
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR-SDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAE 80 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE-ETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEe-cCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeee
Confidence 46999999999999999999999999999999999999887643 356677777777665555555555543211000 0
Q ss_pred ccccceeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhhhcCchhhhccCCccHHHHHHH
Q 009678 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRK 215 (529)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 215 (529)
+. ..+.. ....
T Consensus 81 ~~------------~~~~~-------------------------------------------------~~~~-------- 91 (336)
T 1yvv_A 81 WT------------PLLYN-------------------------------------------------FHAG-------- 91 (336)
T ss_dssp EC------------CCEEE-------------------------------------------------ESSS--------
T ss_pred cc------------cccee-------------------------------------------------ccCc--------
Confidence 00 00000 0000
Q ss_pred cCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhhhccCCeeeeecCCCCccchHHHHHHHHHcCcEEEeccee
Q 009678 216 QGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRV 295 (529)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~l~~~l~~~l~~~G~~i~~~t~V 295 (529)
. ..... .+ ...+.. ..-...+.+.+.+ |++|+++++|
T Consensus 92 -----~---------------~~~~~-----------------~~-~~~~~~----~~~~~~l~~~l~~-g~~i~~~~~v 128 (336)
T 1yvv_A 92 -----R---------------LSPSP-----------------DE-QVRWVG----KPGMSAITRAMRG-DMPVSFSCRI 128 (336)
T ss_dssp -----B---------------CCCCC-----------------TT-SCEEEE----SSCTHHHHHHHHT-TCCEECSCCE
T ss_pred -----c---------------cccCC-----------------CC-CccEEc----CccHHHHHHHHHc-cCcEEecCEE
Confidence 0 00000 00 000111 0112334444433 7899999999
Q ss_pred eEEEecCCCCEEEEEEcCCcEEe-cCEEEEccCHHHHhhhCCCchhhhHHHHHhhcCCCcCeEEEEEEecCCcccccCcc
Q 009678 296 QKIELNDDGTVKNFLLTNGNVID-GDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHL 374 (529)
Q Consensus 296 ~~I~~~~~~~~~~v~~~~G~~i~-ad~VI~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~ 374 (529)
++|+.+++++ .|++.+|+.+. ||.||+|+|+....++++.. ......+..+.+.+..++.+.|++++|.+....
T Consensus 129 ~~i~~~~~~~--~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (336)
T 1yvv_A 129 TEVFRGEEHW--NLLDAEGQNHGPFSHVIIATPAPQASTLLAAA---PKLASVVAGVKMDPTWAVALAFETPLQTPMQGC 203 (336)
T ss_dssp EEEEECSSCE--EEEETTSCEEEEESEEEECSCHHHHGGGGTTC---HHHHHHHTTCCEEEEEEEEEEESSCCSCCCCEE
T ss_pred EEEEEeCCEE--EEEeCCCcCccccCEEEEcCCHHHHHHhhccC---HHHHHHHhhcCccceeEEEEEecCCCCCCCCeE
Confidence 9999865553 58888997664 99999999999888877542 233466788888899999999999887665544
Q ss_pred cccCCcceeeeccccccccccCCCCceEEEEec-CccccCCCChHHHHHHHHHHHHHhCCCCccccccccEEEEEEEecc
Q 009678 375 LFSSSLLSVYADMSLTCKEYYNPNQSMLELVFA-PAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKT 453 (529)
Q Consensus 375 ~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~~p~~~~~~~~~~~~~~~~~~~~ 453 (529)
...+..+.+.++.+. .+...+.+..++..... ....+..++++++.+.+++.+.++++..... +... ...+|
T Consensus 204 ~~~~~~~~~l~~~~~-~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~-p~~~-----~~~rw 276 (336)
T 1yvv_A 204 FVQDSPLDWLARNRS-KPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPA-PVFS-----LAHRW 276 (336)
T ss_dssp EECSSSEEEEEEGGG-STTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCC-CSEE-----EEEEE
T ss_pred EeCCCceeEEEecCc-CCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCC-CcEE-----Ecccc
Confidence 333222233222221 11111111222222111 1245567889999999999999999853211 1111 22223
Q ss_pred CCcccccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhh
Q 009678 454 PRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 513 (529)
Q Consensus 454 p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i~~~l~~ 513 (529)
.+..+.+..+. .....+.++|++|||++.+ ++|++|+.||.++|+.|.+.+..
T Consensus 277 ~~a~~~~~~~~----~~~~~~~~rl~laGDa~~g---~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 277 LYARPAGAHEW----GALSDADLGIYVCGDWCLS---GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp EEEEESSCCCC----SCEEETTTTEEECCGGGTT---SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CccCCCCCCCC----CeeecCCCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHhhh
Confidence 22222222111 1112345899999999976 69999999999999999998754
No 26
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.90 E-value=2.3e-21 Score=196.22 Aligned_cols=388 Identities=13% Similarity=0.099 Sum_probs=208.0
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccCCCCe---------------eeeeeeeecC---
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDW---------------YETGLHIFFG--- 116 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~~g~~---------------~d~G~~~~~~--- 116 (529)
+.++||||||||++||+||+.|+++|++|+|||+++++||++.++...+++. ++.|.++..+
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P 88 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIP 88 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSC
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeecccc
Confidence 3568999999999999999999999999999999999999999864211011 3445444432
Q ss_pred ----CcchHHHHHHHcCCCCcccccccceeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHH--hhcc
Q 009678 117 ----AYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKF--AIGL 190 (529)
Q Consensus 117 ----~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 190 (529)
....+.++++++|+...+.+...+..+... ++.. +. +|... ...+. .......++... ....
T Consensus 89 ~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~--~g~~--~~----~p~~~--~~~~~--~~l~~~~~~~~~~~~~~~ 156 (453)
T 2bcg_G 89 KFLMANGELTNILIHTDVTRYVDFKQVSGSYVFK--QGKI--YK----VPANE--IEAIS--SPLMGIFEKRRMKKFLEW 156 (453)
T ss_dssp CBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEE--TTEE--EE----CCSSH--HHHHH--CTTSCHHHHHHHHHHHHH
T ss_pred ceeecCcHHHHHHHhcCCccceEEEEccceeEEe--CCeE--EE----CCCCh--HHHHh--hhccchhhHHHHHHHHHH
Confidence 234688999999987655555443333221 1211 11 11110 11111 011111111110 0000
Q ss_pred hhhhhcCchh-h--hccCCccHHHHHHHcCCChHHHHHHHHHHHhhcCCC-CCccccHHHHHHHHHHHh---hhccCCee
Q 009678 191 LPAIIGGQAY-V--EAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFI-NPDELSMQCILIALNRFL---QEKHGSKM 263 (529)
Q Consensus 191 ~~~~~~~~~~-~--~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~g~~~ 263 (529)
........+. + ......++.+|+++++....+.. ++..... .... .....+....+..+..+. .......+
T Consensus 157 ~~~~~~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~-l~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~ 234 (453)
T 2bcg_G 157 ISSYKEDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKE-FIGHAMA-LWTNDDYLQQPARPSFERILLYCQSVARYGKSPY 234 (453)
T ss_dssp HHHCBTTBGGGSTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTS-CCSSSGGGGSBHHHHHHHHHHHHHHHHHHSSCSE
T ss_pred HHHhccCCchhhhccccccCCHHHHHHHhCCCHHHHH-HHHHHHH-hccCccccCCchHHHHHHHHHHHHHHHhhcCCce
Confidence 0000000000 0 02356899999999877765533 2221111 1000 001112222221111111 11112346
Q ss_pred eeecCCCCccchHHHHHHHHHcCcEEEecceeeEEEecC-CCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCchhhh
Q 009678 264 AFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELND-DGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEM 342 (529)
Q Consensus 264 ~~~~g~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~-~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~ 342 (529)
.++.|| ++.++++|++.+++.|++|+++++|++|..+. ++++++|++ +|+++.||+||+|++++.- ++
T Consensus 235 ~~p~gG-~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~-~l-------- 303 (453)
T 2bcg_G 235 LYPMYG-LGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE-KC-------- 303 (453)
T ss_dssp EEETTC-TTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG-GE--------
T ss_pred EeeCCC-HHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch-hh--------
Confidence 677777 89999999999999999999999999999852 566667877 4778999999999988731 11
Q ss_pred HHHHHhhcCCCcCeEEEEEEecCCccc--cc--CcccccC----Ccceeeecc-ccccccccCCCCceEEEE-ecCcccc
Q 009678 343 AYFKRLEKLVGVPVINIHIWFDRKLKN--TY--DHLLFSS----SLLSVYADM-SLTCKEYYNPNQSMLELV-FAPAEEW 412 (529)
Q Consensus 343 ~~~~~~~~~~~~~~~~v~l~~~~~~~~--~~--~~~~~~~----~~~~~~~~~-s~~~~~~~~~~~~~l~~~-~~~~~~~ 412 (529)
.+... ......+.+++++.. .. ..+++.. ....++... +..+ ..+|+|..++.+. ..+.
T Consensus 304 ------~~~~~-~~~~~~~i~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~v~~~s~~d-~~aP~G~~~~~v~~~~~~--- 372 (453)
T 2bcg_G 304 ------KSTGQ-RVIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYVAIVSDAH-NVCSKGHYLAIISTIIET--- 372 (453)
T ss_dssp ------EEEEE-EEEEEEEEESSCCTTSTTCSSEEEEECGGGTTCSSCEEEEEEEGGG-TSSCTTCEEEEEEEECCS---
T ss_pred ------cccCC-cceeEEEEEccccCCCCCCccEEEEeCccccCCCCCEEEEEeCCCC-CCCCCCcEEEEEEEecCC---
Confidence 11110 122222226665531 10 1112221 111233322 2233 5678888766533 3332
Q ss_pred CCCChHHHHHHHHHHHHHhCCCCccccccccEEEEEEEeccCCcccccCCCCCCCCCCCCCCCCCeEEecccccCCCCCc
Q 009678 413 ISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLAS 492 (529)
Q Consensus 413 ~~~~~~~~~~~~l~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~ 492 (529)
.+.++ .+...++.+.|.. ...+...- .+... .....+|||++|++... ..
T Consensus 373 --~~~~~---~l~~~~~~l~~~~-------~~~~~~~~------~~~~~---------~~~~~~~~~~~~~~~~~---~~ 422 (453)
T 2bcg_G 373 --DKPHI---ELEPAFKLLGPIE-------EKFMGIAE------LFEPR---------EDGSKDNIYLSRSYDAS---SH 422 (453)
T ss_dssp --SCHHH---HTHHHHGGGCSCS-------EEEEEEEE------EEEES---------SCSTTTSEEECCCCCSC---SB
T ss_pred --CCHHH---HHHHHHHHhhhHH-------Hhhccchh------eeeec---------CCCCCCCEEECCCCCcc---cc
Confidence 12222 2223344444431 12222221 11111 11234799999998776 46
Q ss_pred hHHHHHHHHHHHHHHH
Q 009678 493 MEGAVLSGKLCAQAIV 508 (529)
Q Consensus 493 ~~gA~~Sg~~aA~~i~ 508 (529)
+|+|+.+++.++++|.
T Consensus 423 ~~~~~~~~~~~~~~~~ 438 (453)
T 2bcg_G 423 FESMTDDVKDIYFRVT 438 (453)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7999999999999997
No 27
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.89 E-value=2.6e-23 Score=206.73 Aligned_cols=260 Identities=15% Similarity=0.143 Sum_probs=163.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CCCeEEEeccccCCceeEeeccC-CCCee-eeeeeeecCCcchHHHHHHHcCCCC
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLGGKIAAWKDG-DGDWY-ETGLHIFFGAYPNIQNLFGELGIND 132 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~-g~~V~llEa~~~~GG~~~~~~~~-~g~~~-d~G~~~~~~~~~~~~~l~~~lg~~~ 132 (529)
.++||+|||||++||+||+.|+++ |++|+|+|+++++||++.+.... +|+.+ +.|++++...++.+.++++++|+-.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~~g~~~ 85 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQFTDFT 85 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHTTTCCBC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCCcHHHHHHHHHhhhhh
Confidence 468999999999999999999999 99999999999999999987643 68877 4999999887888999999998622
Q ss_pred cccccccceeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHH-HhhcchhhhhcCchhhhccCCccHHH
Q 009678 133 RLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVK-FAIGLLPAIIGGQAYVEAQDGLTVQE 211 (529)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~ 211 (529)
. +.. ...+.. ++.... +|.....+..++... +. .+..+ .+....... ...+..++.+
T Consensus 86 ~--~~~-~~~~~~---~G~~~~------~p~~~~~~~~l~~~~--~~-~~~~~~~l~~~~~~~-------~~~~~~s~~e 143 (399)
T 1v0j_A 86 D--YRH-RVFAMH---NGQAYQ------FPMGLGLVSQFFGKY--FT-PEQARQLIAEQAAEI-------DTADAQNLEE 143 (399)
T ss_dssp C--CCC-CEEEEE---TTEEEE------ESSSHHHHHHHHTSC--CC-HHHHHHHHHHHGGGS-------CTTC----CC
T ss_pred c--ccc-ceEEEE---CCEEEe------CCCCHHHHHHHhccc--CC-HHHHHHHHHHHhhcc-------CCCCcccHHH
Confidence 1 111 111111 111111 122222333333221 11 22221 111111100 1134578899
Q ss_pred HHHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHh--hhccC-Cee-eeecCCCCccchHHHHHHHHHcCc
Q 009678 212 WMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL--QEKHG-SKM-AFLDGNPPERLCLPIVEHIQSLGG 287 (529)
Q Consensus 212 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g-~~~-~~~~g~~~~~l~~~l~~~l~~~G~ 287 (529)
|+.+. +..++.+.++.++....++.++++++..... .+...+ ...+. ..+ .++.|| +..+++.|++ +.|+
T Consensus 144 ~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~-~~~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~---~~g~ 217 (399)
T 1v0j_A 144 KAISL-IGRPLYEAFVKGYTAKQWQTDPKELPAANIT-RLPVRYTFDNRYFSDTYEGLPTDG-YTAWLQNMAA---DHRI 217 (399)
T ss_dssp HHHHH-HCHHHHHHHTHHHHHHHHTSCGGGSCGGGCS-CCCCCSSSCCCSCCCSEEECBTTH-HHHHHHHHTC---STTE
T ss_pred HHHHH-HhHHHHHHHHHHHHHhhcCCChhhcChHhhh-cceeEeccccchhhhhhccccccc-HHHHHHHHHh---cCCe
Confidence 99874 7778888888898888888999988865331 000000 00111 123 255555 5666666654 3578
Q ss_pred EEEecceeeEEEecCCCCEEEEEEcCCcEE-ecCEEEEccCHHHHhhhCCCchhhhHHHHHhhcCCCcCeEEEEEEecCC
Q 009678 288 EVRLNSRVQKIELNDDGTVKNFLLTNGNVI-DGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRK 366 (529)
Q Consensus 288 ~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i-~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~ 366 (529)
+|++|++|++|... | + ++ .||+||+|+|+..+..+. +..+.+.++..+.+.++.+
T Consensus 218 ~I~l~~~V~~I~~~-------v---~--~~~~aD~VI~t~p~~~l~~~~------------l~~l~y~s~~~~~~~~~~~ 273 (399)
T 1v0j_A 218 EVRLNTDWFDVRGQ-------L---R--PGSPAAPVVYTGPLDRYFDYA------------EGRLGWRTLDFEVEVLPIG 273 (399)
T ss_dssp EEECSCCHHHHHHH-------H---T--TTSTTCCEEECSCHHHHTTTT------------TCCCCEEEEEEEEEEESSS
T ss_pred EEEECCchhhhhhh-------h---h--hcccCCEEEECCcHHHHHhhh------------hCCCCcceEEEEEEEEccc
Confidence 99999999999742 2 1 35 799999999998776651 2356677777778888765
Q ss_pred c
Q 009678 367 L 367 (529)
Q Consensus 367 ~ 367 (529)
.
T Consensus 274 ~ 274 (399)
T 1v0j_A 274 D 274 (399)
T ss_dssp C
T ss_pred c
Confidence 4
No 28
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.88 E-value=2.4e-21 Score=193.27 Aligned_cols=263 Identities=14% Similarity=0.080 Sum_probs=178.9
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccC-------------------CCCeeeeeeeee
Q 009678 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG-------------------DGDWYETGLHIF 114 (529)
Q Consensus 54 ~~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~-------------------~g~~~d~G~~~~ 114 (529)
.+..+||+|||+|++|+++|+.|++.|++|+|+|+++.+||++.++... .++.+|++++++
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l 96 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFI 96 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEe
Confidence 4467899999999999999999999999999999999999999886411 256889988877
Q ss_pred cCCcchHHHHHHHcCCCCcccccccceeeecCCC-------CCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHh
Q 009678 115 FGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNK-------PGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFA 187 (529)
Q Consensus 115 ~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (529)
. ....+.+++.+.|+...+.|......+..... .+... . .|. .....++ ...+.+.++.+..
T Consensus 97 ~-~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~--~----VPs---s~~e~~~-~~lLs~~eK~~l~ 165 (475)
T 3p1w_A 97 L-VGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIH--K----VPA---TDMEALV-SPLLSLMEKNRCK 165 (475)
T ss_dssp E-TTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEE--E----CCC---SHHHHHT-CTTSCHHHHHHHH
T ss_pred e-cCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceE--e----CCC---CHHHHhh-ccCCCHHHHHHHH
Confidence 5 44568899999999988888877666544211 11110 1 222 2344454 3567777776654
Q ss_pred hcchhhhhcCc--h-hh--hccCCccHHHHHHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHh---hhcc
Q 009678 188 IGLLPAIIGGQ--A-YV--EAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL---QEKH 259 (529)
Q Consensus 188 ~~~~~~~~~~~--~-~~--~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 259 (529)
+.+........ + .. ...+..++.+|++++++...+.+.+...+ ......+..+.+....+..+..+. ..-.
T Consensus 166 kFL~~l~~~~~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~al-aL~~~~~~~~~~a~~~l~ri~~y~~Sl~~yg 244 (475)
T 3p1w_A 166 NFYQYVSEWDANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAV-ALYLNDDYLKQPAYLTLERIKLYMQSISAFG 244 (475)
T ss_dssp HHHHHHHHCCTTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHT-SCCSSSGGGGSBHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhhhhccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHH-HhhcCCCcccCCHHHHHHHHHHHHHHHhhcC
Confidence 43332211111 0 01 12356899999999998887654222211 111111222345544444333332 1112
Q ss_pred CCeeeeecCCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 260 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 260 g~~~~~~~g~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
++.+.|+.|| +..++++|++.+++.|++|+++++|++|..++++++++|++.+|++++||+||+|++..
T Consensus 245 ~s~~~yp~gG-~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 245 KSPFIYPLYG-LGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp SCSEEEETTC-TTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred CCceEEECCC-HHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 4567889988 89999999999999999999999999999845677889999999889999999998754
No 29
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.87 E-value=7.3e-20 Score=183.92 Aligned_cols=386 Identities=13% Similarity=0.097 Sum_probs=213.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeec-c------C-------------CCCeeeeeeeeec
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWK-D------G-------------DGDWYETGLHIFF 115 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~-~------~-------------~g~~~d~G~~~~~ 115 (529)
..+||+|||||++|+++|+.|++.|++|+|+|+++.+||++.++. . . .++.+|.|++++.
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l~ 84 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLM 84 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcceee
Confidence 568999999999999999999999999999999999999998876 1 0 4577788888776
Q ss_pred CCcchHHHHHHHcCCCCcccccccceeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHH--Hhhcchhh
Q 009678 116 GAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVK--FAIGLLPA 193 (529)
Q Consensus 116 ~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 193 (529)
.. ..+.++++++|+...+.+...+..+... ++.. +. +|... ...+. .......++.. ........
T Consensus 85 ~~-~~l~~ll~~lgl~~~l~~~~~~~~~~~~--~g~~--~~----~p~~~---~~~~~-~~l~~~~~~~~~~~~~~~~~~ 151 (433)
T 1d5t_A 85 AN-GQLVKMLLYTEVTRYLDFKVVEGSFVYK--GGKI--YK----VPSTE---TEALA-SNLMGMFEKRRFRKFLVFVAN 151 (433)
T ss_dssp TT-SHHHHHHHHHTGGGGCCEEECCEEEEEE--TTEE--EE----CCCSH---HHHHH-CSSSCHHHHHHHHHHHHHHHH
T ss_pred cc-chHHHHHHHcCCccceEEEEeCceEEee--CCEE--EE----CCCCH---HHHhh-CcccChhhHHHHHHHHHHHHh
Confidence 43 3578899999987655555443333221 1211 11 11111 01111 01111111110 00000000
Q ss_pred hhcCch---hhhccCCccHHHHHHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhhh--ccC-Ceeeeec
Q 009678 194 IIGGQA---YVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE--KHG-SKMAFLD 267 (529)
Q Consensus 194 ~~~~~~---~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g-~~~~~~~ 267 (529)
.....+ ........++.+|+++++....+.. ++...+....+.++.+.+....+..+..+... .++ ..+.++.
T Consensus 152 ~~~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~p~ 230 (433)
T 1d5t_A 152 FDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVID-FTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPL 230 (433)
T ss_dssp CCTTCGGGGTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSSSCCSEEEET
T ss_pred hcccCchhccccccccCCHHHHHHHcCCCHHHHH-HHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhcCCCcEEEeC
Confidence 000000 0112456899999999877665433 32221111111233333433332222222221 122 3356777
Q ss_pred CCCCccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCchhhhHHHHH
Q 009678 268 GNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKR 347 (529)
Q Consensus 268 g~~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~ 347 (529)
|| +..+++.|++.+++.|++|+++++|++|..+ ++.+.+|++ +|++++||+||+|++++.. .+ .
T Consensus 231 gG-~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~~-~g~~~~ad~VV~a~~~~~~-~~-~----------- 294 (433)
T 1d5t_A 231 YG-LGELPQGFARLSAIYGGTYMLNKPVDDIIME-NGKVVGVKS-EGEVARCKQLICDPSYVPD-RV-R----------- 294 (433)
T ss_dssp TC-TTHHHHHHHHHHHHHTCCCBCSCCCCEEEEE-TTEEEEEEE-TTEEEECSEEEECGGGCGG-GE-E-----------
T ss_pred cC-HHHHHHHHHHHHHHcCCEEECCCEEEEEEEe-CCEEEEEEE-CCeEEECCEEEECCCCCcc-cc-c-----------
Confidence 77 8999999999999999999999999999974 556656665 6778999999999988742 11 0
Q ss_pred hhcCCCcCeEEEEEEecCCccc----ccCcccccC----CcceeeeccccccccccCCCCceEEEE-ecCccccCCCChH
Q 009678 348 LEKLVGVPVINIHIWFDRKLKN----TYDHLLFSS----SLLSVYADMSLTCKEYYNPNQSMLELV-FAPAEEWISCSDS 418 (529)
Q Consensus 348 ~~~~~~~~~~~v~l~~~~~~~~----~~~~~~~~~----~~~~~~~~~s~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~ 418 (529)
.+.. ....+ +.+++++.. ....+.+.. ....++......++..+|+|..++... ..+.. +.+
T Consensus 295 --~~~~-~~~~~-~il~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~s~d~~~aP~G~~~~~~~~~~p~~-----~~~ 365 (433)
T 1d5t_A 295 --KAGQ-VIRII-CILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETT-----DPE 365 (433)
T ss_dssp --EEEE-EEEEE-EEESSCCTTSTTCSSEEEEECGGGTTCSSCEEEEEEEGGGTSSCTTCEEEEEEEECCSS-----CHH
T ss_pred --ccCc-ceeEE-EEEcCcccccCCCceEEEEeCccccCCCCCEEEEEECCCCcccCCCCEEEEEEEecCCC-----CHH
Confidence 1110 11112 225555421 111112221 011223222225667788888776533 33321 222
Q ss_pred HHHHHHHHHHHHhCCCCccccccccEEEEEEEeccCCcccccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchHHHHH
Q 009678 419 EIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVL 498 (529)
Q Consensus 419 ~~~~~~l~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~ 498 (529)
+.+...++.+.|.. ...+...- .+... .....+|+|+++++-.. ..+|+++.
T Consensus 366 ---~~l~~~~~~l~~~~-------~~~~~~~~------~~~~~---------~~~~~~~~~~~~~~d~~---~~~e~~~~ 417 (433)
T 1d5t_A 366 ---KEVEPALGLLEPID-------QKFVAISD------LYEPI---------DDGSESQVFCSCSYDAT---THFETTCN 417 (433)
T ss_dssp ---HHTHHHHTTTCSCS-------EEEEEEEE------EEEES---------CCSTTTCEEECCCCCSC---SBSHHHHH
T ss_pred ---HHHHHHHHHhhhHH-------hheeccce------eeeec---------CCCCCCCEEECCCCCcc---ccHHHHHH
Confidence 23333334443431 12222221 11111 01234799999987665 35699999
Q ss_pred HHHHHHHHHH
Q 009678 499 SGKLCAQAIV 508 (529)
Q Consensus 499 Sg~~aA~~i~ 508 (529)
+++..-++|.
T Consensus 418 ~~~~~~~~~~ 427 (433)
T 1d5t_A 418 DIKDIYKRMA 427 (433)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9988888775
No 30
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.87 E-value=3e-21 Score=190.61 Aligned_cols=251 Identities=17% Similarity=0.189 Sum_probs=162.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccC-CCCee-eeeeeeecCCcchHHHHHHHcCCCCcc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG-DGDWY-ETGLHIFFGAYPNIQNLFGELGINDRL 134 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~-~g~~~-d~G~~~~~~~~~~~~~l~~~lg~~~~~ 134 (529)
++||+|||||++|+++|+.|++.|++|+|+|+++++||++.+.... .|+.+ +.|+|++...++.+.+++++++....
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~- 81 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNETVWNYVNKHAEMMP- 81 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHHTTSCEEE-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCCCHHHHHHHHHHhhhcc-
Confidence 4799999999999999999999999999999999999999886643 57775 89999999888889999999885211
Q ss_pred cccccceeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhhhcCchhhhccCCccHHHHHH
Q 009678 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (529)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (529)
+.. ...... ++.... +|.....+..++... +...+..+.+..... . . ..+..++.+|+.
T Consensus 82 -~~~-~~~~~~---~g~~~~------~P~~~~~~~~l~~~~--~~~~~~~~~l~~~~~----~--~--~~~~~sl~e~~~ 140 (384)
T 2bi7_A 82 -YVN-RVKATV---NGQVFS------LPINLHTINQFFSKT--CSPDEARALIAEKGD----S--T--IADPQTFEEEAL 140 (384)
T ss_dssp -CCC-CEEEEE---TTEEEE------ESCCHHHHHHHTTCC--CCHHHHHHHHHHHSC----C--S--CSSCCBHHHHHH
T ss_pred -ccc-ceEEEE---CCEEEE------CCCChhHHHHHhccc--CCHHHHHHHHHHhhh----c--c--CCCCcCHHHHHH
Confidence 111 011111 111111 222233333333211 111111111111111 0 0 235689999999
Q ss_pred HcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHH-H-hhhc-cCCee-eeecCCCCccchHHHHHHHHHcCcEEE
Q 009678 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR-F-LQEK-HGSKM-AFLDGNPPERLCLPIVEHIQSLGGEVR 290 (529)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~-~g~~~-~~~~g~~~~~l~~~l~~~l~~~G~~i~ 290 (529)
+. +..++.+.++.++....++.++++++..... .+.. + .... ....+ .++.|| +..+++.|++ +.|++|+
T Consensus 141 ~~-~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~-r~~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~---~~g~~I~ 214 (384)
T 2bi7_A 141 RF-IGKELYEAFFKGYTIKQWGMQPSELPASILK-RLPVRFNYDDNYFNHKFQGMPKCG-YTQMIKSILN---HENIKVD 214 (384)
T ss_dssp HH-HCHHHHHHHTHHHHHHHHSSCGGGSBGGGCC-SCCCCSSSCCCSCCCSEEEEETTH-HHHHHHHHHC---STTEEEE
T ss_pred Hh-hcHHHHHHHHHHHHHHHhCCCHHHhCHHHHh-ccccccccccccccccccEEECcC-HHHHHHHHHh---cCCCEEE
Confidence 87 7788889999999999999999998875321 0000 0 0000 11223 266665 6666666664 3578999
Q ss_pred ecceee-EEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCchhhhHHHHHhhcCCCcCeEEEEEEec
Q 009678 291 LNSRVQ-KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD 364 (529)
Q Consensus 291 ~~t~V~-~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 364 (529)
++++|+ +|.. .+|+||+|+|+..+..+. +..+.+.++..+.+.++
T Consensus 215 l~~~V~~~i~~-----------------~~d~VI~a~p~~~~~~~~------------lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 215 LQREFIVEERT-----------------HYDHVFYSGPLDAFYGYQ------------YGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp ESCCCCGGGGG-----------------GSSEEEECSCHHHHTTTT------------TCCCCEEEEEEEEEEEE
T ss_pred ECCeeehhhhc-----------------cCCEEEEcCCHHHHHHhh------------cCCCCcceEEEEEEEeC
Confidence 999999 7852 299999999998877652 23466777777777776
No 31
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.86 E-value=1.7e-21 Score=191.23 Aligned_cols=254 Identities=16% Similarity=0.153 Sum_probs=164.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccCCCCeee-eeeeeecCCcchHHHHHHHcCCCCccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYE-TGLHIFFGAYPNIQNLFGELGINDRLQ 135 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~~g~~~d-~G~~~~~~~~~~~~~l~~~lg~~~~~~ 135 (529)
++||+|||||++||++|++|+++|++|+|+|+++++||++.+.. .+|+.++ .|+|++...++.+.+++++++....
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~-- 77 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTED-CEGIQIHKYGAHIFHTNDKYIWDYVNDLVEFNR-- 77 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEE-ETTEEEETTSCCCEEESCHHHHHHHHTTSCBCC--
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeec-cCCceeeccCCceecCCCHHHHHHHHHhhhhhh--
Confidence 36999999999999999999999999999999999999998865 4678885 9999998777788888888874221
Q ss_pred ccccceeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHH-HHhhcchhhhhcCchhhhccCCccHHHHHH
Q 009678 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKV-KFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (529)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (529)
+..... ... ++... . +|.....+..++... ....+ +.+...... ....+..++.+|+.
T Consensus 78 ~~~~~~-~~~---~g~~~--~----~p~~~~~~~~l~~~~----~~~~~~~~l~~~~~~-------~~~~~~~s~~~~~~ 136 (367)
T 1i8t_A 78 FTNSPL-AIY---KDKLF--N----LPFNMNTFHQMWGVK----DPQEAQNIINAQKKK-------YGDKVPENLEEQAI 136 (367)
T ss_dssp CCCCCE-EEE---TTEEE--E----SSBSHHHHHHHHCCC----CHHHHHHHHHHHTTT-------TCCCCCCSHHHHHH
T ss_pred ccccce-EEE---CCeEE--E----cCCCHHHHHHHhccC----CHHHHHHHHHHHhhc-------cCCCCCccHHHHHH
Confidence 111111 110 11111 1 222333344443221 11111 111111110 11235689999999
Q ss_pred HcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHh--hhcc-CCee-eeecCCCCccchHHHHHHHHHcCcEEE
Q 009678 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL--QEKH-GSKM-AFLDGNPPERLCLPIVEHIQSLGGEVR 290 (529)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-g~~~-~~~~g~~~~~l~~~l~~~l~~~G~~i~ 290 (529)
++ +..++.+.++.++....++.++++++..... .+.... ...+ ...+ .++.|| +..+++.|++ |++|+
T Consensus 137 ~~-~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~-~l~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~-----g~~i~ 208 (367)
T 1i8t_A 137 SL-VGEDLYQALIKGYTEKQWGRSAKELPAFIIK-RIPVRFTFDNNYFSDRYQGIPVGG-YTKLIEKMLE-----GVDVK 208 (367)
T ss_dssp HH-HHHHHHHHHTHHHHHHHHSSCGGGSCTTSSC-CCCBCSSSCCCSCCCSEEECBTTC-HHHHHHHHHT-----TSEEE
T ss_pred HH-HhHHHHHHHHHHHHhhhhCCChHHcCHHHHh-hceeeeccccccccchhhcccCCC-HHHHHHHHhc-----CCEEE
Confidence 87 7778888899999999999999998864321 000000 0011 1223 266666 5666666654 68999
Q ss_pred ecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCchhhhHHHHHhhcCCCcCeEEEEEEecCCc
Q 009678 291 LNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKL 367 (529)
Q Consensus 291 ~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~ 367 (529)
+|++|++|.. . | .+.+|+||+|+|+..+..+ .+..+.+.++..+.+.++++.
T Consensus 209 l~~~V~~i~~----~---v------~~~~D~VV~a~p~~~~~~~------------~l~~l~y~s~~~v~~~~d~~~ 260 (367)
T 1i8t_A 209 LGIDFLKDKD----S---L------ASKAHRIIYTGPIDQYFDY------------RFGALEYRSLKFETERHEFPN 260 (367)
T ss_dssp CSCCGGGSHH----H---H------HTTEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEEESSSC
T ss_pred eCCceeeech----h---h------hccCCEEEEeccHHHHHHH------------hhCCCCCceEEEEEEEecccc
Confidence 9999998863 1 2 2469999999999876543 134567777778888888753
No 32
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.82 E-value=4.1e-19 Score=173.94 Aligned_cols=260 Identities=19% Similarity=0.213 Sum_probs=167.0
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccCCCCee-eeeeeeecCCcchHHHHHHHcCCCC
Q 009678 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWY-ETGLHIFFGAYPNIQNLFGELGIND 132 (529)
Q Consensus 54 ~~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~~g~~~-d~G~~~~~~~~~~~~~l~~~lg~~~ 132 (529)
.+..+||+|||||++||++|++|+++|++|+|+|+++++||++.+.....|+.+ +.|+|++......+.+++++++...
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 105 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTNSKDVFEYLSRFTEWR 105 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEESCHHHHHHHHTSCCEE
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCCChHHHHHHHHHhhhcc
Confidence 346789999999999999999999999999999999999999988654567765 9999999888888999999998421
Q ss_pred cccccccceeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhhhcCchhhhccCCccHHHH
Q 009678 133 RLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEW 212 (529)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 212 (529)
. +.. ...... ++.+.. +|.....+..++.. .+........+. . ......+..++++|
T Consensus 106 ~--~~~-~~~~~~---~g~l~~------lP~~~~~~~~l~~~--~~~~~~~~~~l~----~-----~~~~~~~~~s~~e~ 162 (397)
T 3hdq_A 106 P--YQH-RVLASV---DGQLLP------IPINLDTVNRLYGL--NLTSFQVEEFFA----S-----VAEKVEQVRTSEDV 162 (397)
T ss_dssp E--CCC-BEEEEE---TTEEEE------ESCCHHHHHHHHTC--CCCHHHHHHHHH----H-----HCCCCSSCCBHHHH
T ss_pred c--ccc-cceEEE---CCEEEE------cCCChHHHHHhhcc--CCCHHHHHHHHh----h-----cccCCCCCcCHHHH
Confidence 1 111 111111 122211 23333333333321 111111111111 0 01123456899999
Q ss_pred HHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhh--hcc-CCee-eeecCCCCccchHHHHHHHHHcCcE
Q 009678 213 MRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ--EKH-GSKM-AFLDGNPPERLCLPIVEHIQSLGGE 288 (529)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-g~~~-~~~~g~~~~~l~~~l~~~l~~~G~~ 288 (529)
+.++ +..++.+.++.++....++.+++++++.... .+..... ..+ ...+ .++.+| ...+++.|+ ++.|++
T Consensus 163 ~~~~-~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~-Rvp~~~~~d~~yf~~~~qg~P~gG-y~~l~e~l~---~~~g~~ 236 (397)
T 3hdq_A 163 VVSK-VGRDLYNKFFRGYTRKQWGLDPSELDASVTA-RVPTRTNRDNRYFADTYQAMPLHG-YTRMFQNML---SSPNIK 236 (397)
T ss_dssp HHHH-HHHHHHHHHTHHHHHHHHSSCGGGSBTTTGG-GSCCCSSCCCBSCCCSEEEEETTC-HHHHHHHHT---CSTTEE
T ss_pred HHHh-cCHHHHHHHHHHHhCchhCCCHHHHHHHHHH-hcCcccccCccchhhhheeccCCC-HHHHHHHHH---hccCCE
Confidence 9876 7778889999999999999999999975321 1100000 000 1112 345555 455555553 345899
Q ss_pred EEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCchhhhHHHHHhhcCCCcCeEEEEEEecCCcc
Q 009678 289 VRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLK 368 (529)
Q Consensus 289 i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~ 368 (529)
|+++++|+++ ++.+.+|+||+|+|...+... ....+.+.++..+.+.++.+..
T Consensus 237 V~l~~~v~~~---------------~~~~~~d~vI~T~P~d~~~~~------------~~g~L~yrsl~~~~~~~~~~~~ 289 (397)
T 3hdq_A 237 VMLNTDYREI---------------ADFIPFQHMIYTGPVDAFFDF------------CYGKLPYRSLEFRHETHDTEQL 289 (397)
T ss_dssp EEESCCGGGT---------------TTTSCEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEEESSSCS
T ss_pred EEECCeEEec---------------cccccCCEEEEcCCHHHHHHH------------hcCCCCCceEEEEEEEeccccC
Confidence 9999999732 334679999999998765331 2345667778788888886544
Q ss_pred c
Q 009678 369 N 369 (529)
Q Consensus 369 ~ 369 (529)
.
T Consensus 290 ~ 290 (397)
T 3hdq_A 290 L 290 (397)
T ss_dssp C
T ss_pred C
Confidence 3
No 33
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.74 E-value=1.4e-14 Score=148.57 Aligned_cols=254 Identities=17% Similarity=0.142 Sum_probs=140.7
Q ss_pred HHHHHHHcCCCCcccccccceeeecCCCCCCcccccCCCCCCCchhHHHHHHhcCCCCChHHHHHHhhcchhhhh--cCc
Q 009678 121 IQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAII--GGQ 198 (529)
Q Consensus 121 ~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 198 (529)
+.+++.++|+...+.|......+...+ +.+. ..|. ....++.. ..+.+.++.++.+.+..... ...
T Consensus 239 lv~LL~~sgV~~yLEFk~v~~~y~~~~--G~~~------~VPa---s~~eif~s-~~Lsl~EKr~L~kFl~~~~~~~~~p 306 (650)
T 1vg0_A 239 LIDLLIKSNVSRYAEFKNITRILAFRE--GTVE------QVPC---SRADVFNS-KQLTMVEKRMLMKFLTFCVEYEEHP 306 (650)
T ss_dssp HHHHHHHHTGGGGCCEEECCEEEEESS--SSEE------ECCC---SHHHHHHC-SSSCHHHHHHHHHHHHHHHTGGGCH
T ss_pred HHHHHHHcCCcceeeEEEccceEEecC--CCEe------ECCC---CHHHHHhC-cCCCHHHHHHHHHHHHHHHHhccCh
Confidence 456666777666666655544443321 2111 0222 33445554 66677776655442221111 111
Q ss_pred hhhhccCCccHHHHHHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhh--hccC-CeeeeecCCCCccch
Q 009678 199 AYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ--EKHG-SKMAFLDGNPPERLC 275 (529)
Q Consensus 199 ~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g-~~~~~~~g~~~~~l~ 275 (529)
..+..++..++.+|+++++....+..-+.. .+ .. ......+....+..+..++. ..+| ..+.|+.|| ++.|+
T Consensus 307 ~~~~~~d~~S~~d~L~~~~ls~~L~~~L~~-~l-al--~~~~~~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG-~g~L~ 381 (650)
T 1vg0_A 307 DEYRAYEGTTFSEYLKTQKLTPNLQYFVLH-SI-AM--TSETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYG-QGELP 381 (650)
T ss_dssp HHHHTTTTSBHHHHHTTSSSCHHHHHHHHH-HT-TC----CCSCBHHHHHHHHHHHHHHTTSSSSSSEEEETTC-TTHHH
T ss_pred HHHhhhccCCHHHHHHHhCCCHHHHHHHHH-HH-hc--cCCCCCchhHHHHHHHHHHHHHHhhccCceEEeCCc-hhHHH
Confidence 112355688999999998777765433221 11 11 12222234333322233321 1233 367788887 89999
Q ss_pred HHHHHHHHHcCcEEEecceeeEEEecCC-CCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCchhhhHHHHHhhcCCCc
Q 009678 276 LPIVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGV 354 (529)
Q Consensus 276 ~~l~~~l~~~G~~i~~~t~V~~I~~~~~-~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 354 (529)
++|++.++..|++|+++++|++|..+++ +++++|.+.+|++++||+||++. .+ ++.... ..+.+.
T Consensus 382 qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~-~~-----lp~~~~--------~~~~~~ 447 (650)
T 1vg0_A 382 QCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIED-SY-----LSENTC--------SRVQYR 447 (650)
T ss_dssp HHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEG-GG-----BCTTTT--------TTCCCE
T ss_pred HHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEECh-hh-----cCHhHh--------cccccc
Confidence 9999999999999999999999988543 77888888889999999999832 22 232211 112334
Q ss_pred CeEEEEEEecCCcccccC----c-ccccCC---cceeeeccccccccccCCCCceEEEE
Q 009678 355 PVINIHIWFDRKLKNTYD----H-LLFSSS---LLSVYADMSLTCKEYYNPNQSMLELV 405 (529)
Q Consensus 355 ~~~~v~l~~~~~~~~~~~----~-~~~~~~---~~~~~~~~s~~~~~~~~~~~~~l~~~ 405 (529)
.+.++.+.++++....-. . ++++.. ...++...........|+|..++.+.
T Consensus 448 ~v~R~i~i~~~pi~~~~~~~~~~~iiiP~~~g~~~~V~i~~~Ss~~~~cP~G~~Vv~ls 506 (650)
T 1vg0_A 448 QISRAVLITDGSVLRTDADQQVSILTVPAEEPGSFAVRVIELCSSTMTCMKGTYLVHLT 506 (650)
T ss_dssp EEEEEEEEESSCSSCCSCCCCCEEEEECCSSTTSCCEEEEEECGGGTSSCTTCEEEEEE
T ss_pred ceEEEEEEecCCCCCcCCCcceEEEEccCccCCCCCEEEEEeCCCCCCCCCCCEEEEEE
Confidence 566777777776532111 1 111110 01122211222556778888877654
No 34
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.71 E-value=2.7e-15 Score=142.53 Aligned_cols=66 Identities=27% Similarity=0.475 Sum_probs=55.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccCCCCeeeeeeeeecCCcchHHH
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQN 123 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~ 123 (529)
++||+|||||++||+||+.|+++|++|+||||++.+||++.+.. ..+..+|.|+..+......+..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~-~~~~~~d~g~~~~~~~~~~~~~ 67 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR-SDAGALDMGAQYFTARDRRFAT 67 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE-ETTEEEECSCCCBCCCSHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccc-cCCceeecCccccccCcHHHHH
Confidence 57999999999999999999999999999999999999987754 4677889998877644444333
No 35
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.71 E-value=1.3e-16 Score=161.18 Aligned_cols=60 Identities=12% Similarity=0.194 Sum_probs=53.1
Q ss_pred CccchHHHHHHHHHcCcEEEecc---eeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNS---RVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 331 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t---~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~ 331 (529)
+..++..|.+.++++|++|++++ +|++|..+ ++.+.+|+|.+|++++||.||+|+|++.-
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 56788999999999999999999 99999984 55676799999988999999999999863
No 36
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.70 E-value=1.2e-16 Score=155.03 Aligned_cols=80 Identities=33% Similarity=0.578 Sum_probs=71.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCCeEEEecc-ccCCceeEeecc---------CCCCeeeeeeeeecCCcchHHHH
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR-DVLGGKIAAWKD---------GDGDWYETGLHIFFGAYPNIQNL 124 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~-~~~GG~~~~~~~---------~~g~~~d~G~~~~~~~~~~~~~l 124 (529)
+..+||+|||||++||+||+.|++.|++|+|||++ +++||++.++.. ..++.++.|++++...+..+.++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~~~~ 121 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLTLAL 121 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHHHHH
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHHHHHHH
Confidence 45789999999999999999999999999999999 999999988753 25789999999998888889999
Q ss_pred HHHcCCCCcc
Q 009678 125 FGELGINDRL 134 (529)
Q Consensus 125 ~~~lg~~~~~ 134 (529)
++++|+....
T Consensus 122 ~~~lGl~~~~ 131 (376)
T 2e1m_A 122 IDKLGLKRRL 131 (376)
T ss_dssp HHHTTCCEEE
T ss_pred HHHcCCCcce
Confidence 9999987643
No 37
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.69 E-value=7.5e-17 Score=159.95 Aligned_cols=205 Identities=13% Similarity=0.138 Sum_probs=112.4
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHh--hhCCCchhhhHHHHHh
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILK--LQLPENWKEMAYFKRL 348 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~--~l~~~~~~~~~~~~~~ 348 (529)
+..+++.|.+.+++.|++|+++++|++|..+ ++.+.+|++.+| +++||.||+|+|.+... ..+....
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~--------- 216 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIKT--------- 216 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCCS---------
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCCc---------
Confidence 5688899999999999999999999999984 455656888888 89999999999987522 1111000
Q ss_pred hcCCCcCeEEEEEEecCCcccccC-cccccCCcceeeeccccccccccCCCCceEEEE-ecCccccCCCChHHHHHHHHH
Q 009678 349 EKLVGVPVINIHIWFDRKLKNTYD-HLLFSSSLLSVYADMSLTCKEYYNPNQSMLELV-FAPAEEWISCSDSEIIDATMK 426 (529)
Q Consensus 349 ~~~~~~~~~~v~l~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~l~ 426 (529)
.+...+.....+.++. ...... ..++.......|.. + .+++ .++... ......+....+++..+.+++
T Consensus 217 -~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~y~~-----p--~~~g-~~iG~~~~~~~~~~~~~~~~~~~~~l~~ 286 (382)
T 1y56_B 217 -KIPIEPYKHQAVITQP-IKRGTINPMVISFKYGHAYLT-----Q--TFHG-GIIGGIGYEIGPTYDLTPTYEFLREVSY 286 (382)
T ss_dssp -CCCCEEEEEEEEEECC-CSTTSSCSEEEESTTTTEEEE-----C--CSSS-CCEEECSCCBSSCCCCCCCHHHHHHHHH
T ss_pred -CcCCCeeEeEEEEEcc-CCcccCCCeEEecCCCeEEEE-----E--eCCe-EEEecCCCCCCCCCCCCCCHHHHHHHHH
Confidence 0111222222233332 111001 11111000011110 0 1223 222211 111122223345677888999
Q ss_pred HHHHhCCCCccccccccEEEEEEEeccCCcccccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHH
Q 009678 427 ELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 506 (529)
Q Consensus 427 ~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~ 506 (529)
.+.+++|..... .+. ..| .|....+++..+..-. ....+|+|++..+.+ .++.-|...|+.+|+.
T Consensus 287 ~~~~~~p~l~~~-----~~~-~~~----~g~r~~t~d~~p~ig~-~~~~~~~~~~~G~~g----~G~~~a~~~g~~la~~ 351 (382)
T 1y56_B 287 YFTKIIPALKNL-----LIL-RTW----AGYYAKTPDSNPAIGR-IEELNDYYIAAGFSG----HGFMMAPAVGEMVAEL 351 (382)
T ss_dssp HHHHHCGGGGGS-----EEE-EEE----EEEEEECTTSCCEEEE-ESSSBTEEEEECCTT----CHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCcCCC-----Cce-EEE----EeccccCCCCCcEecc-CCCCCCEEEEEecCc----chHhhhHHHHHHHHHH
Confidence 999999964211 222 122 1333333332221110 112579999876544 4788899999999999
Q ss_pred HHHHH
Q 009678 507 IVQDY 511 (529)
Q Consensus 507 i~~~l 511 (529)
|....
T Consensus 352 i~~~~ 356 (382)
T 1y56_B 352 ITKGK 356 (382)
T ss_dssp HHHSS
T ss_pred HhCCC
Confidence 98753
No 38
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.69 E-value=6.8e-17 Score=161.60 Aligned_cols=202 Identities=13% Similarity=0.155 Sum_probs=109.8
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHh--hhCCCchhhhHHHHHh
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILK--LQLPENWKEMAYFKRL 348 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~--~l~~~~~~~~~~~~~~ 348 (529)
+..+++.|.+.+++.|++|+++++|++|..+ ++.+++|++.+| +++||.||+|+|.+... ..+..
T Consensus 173 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~----------- 239 (405)
T 2gag_B 173 HDHVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGF----------- 239 (405)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTC-----------
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCC-----------
Confidence 4578889999999999999999999999974 555667888888 79999999999987521 11110
Q ss_pred hcCCCcCeEEEEEEecCCcccccCcccccCCcceeeeccccccccccCCCCceEEEEecCccccCCCChHHHHHHHHHHH
Q 009678 349 EKLVGVPVINIHIWFDRKLKNTYDHLLFSSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKEL 428 (529)
Q Consensus 349 ~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l 428 (529)
.+...+.....+.+ ++.........+ +.....|.. + .+.+..++.....+...+....+++..+.+++.+
T Consensus 240 -~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~y~~-----p--~~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~~ 309 (405)
T 2gag_B 240 -ELPIQSHPLQALVS-ELFEPVHPTVVM-SNHIHVYVS-----Q--AHKGELVMGAGIDSYNGYGQRGAFHVIQEQMAAA 309 (405)
T ss_dssp -CCCEEEEEEEEEEE-EEBCSCCCSEEE-ETTTTEEEE-----E--CTTSEEEEEEEECSSCCCSSCCCTHHHHHHHHHH
T ss_pred -CCCccccceeEEEe-cCCccccCceEE-eCCCcEEEE-----E--cCCCcEEEEeccCCCCccccCCCHHHHHHHHHHH
Confidence 01111111111222 221111111100 000001110 0 0123333333322222222334566788899999
Q ss_pred HHhCCCCccccccccEEEEEEEeccCCcccccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHH
Q 009678 429 AKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 508 (529)
Q Consensus 429 ~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i~ 508 (529)
.+++|..... .+. ..| .+.....++..+..- ..|.+|+|++..+... ++..|...|+.+|+.|.
T Consensus 310 ~~~~p~l~~~-----~~~-~~w----~g~~~~t~d~~p~ig--~~~~~~l~~~~G~~g~----G~~~a~~~g~~la~~i~ 373 (405)
T 2gag_B 310 VELFPIFARA-----HVL-RTW----GGIVDTTMDASPIIS--KTPIQNLYVNCGWGTG----GFKGTPGAGFTLAHTIA 373 (405)
T ss_dssp HHHCGGGGGC-----EEC-EEE----EEEEEEETTSCCEEE--ECSSBTEEEEECCGGG----CSTTHHHHHHHHHHHHH
T ss_pred HHhCCccccC-----Ccc-eEE----eeccccCCCCCCEec--ccCCCCEEEEecCCCc----hhhHHHHHHHHHHHHHh
Confidence 9999864211 111 111 122222333222111 1125799998766543 56668999999999998
Q ss_pred HHH
Q 009678 509 QDY 511 (529)
Q Consensus 509 ~~l 511 (529)
...
T Consensus 374 g~~ 376 (405)
T 2gag_B 374 NDE 376 (405)
T ss_dssp HTS
T ss_pred CCC
Confidence 643
No 39
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.68 E-value=3.6e-17 Score=162.20 Aligned_cols=57 Identities=18% Similarity=0.084 Sum_probs=50.5
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
+..++..|.+.++++|++|+++++|++|..++++ +.|+|.+| +++||+||+|+|.+.
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~--~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGA--WEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTE--EEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCe--EEEEeCCC-EEEcCEEEECCChhH
Confidence 6788999999999999999999999999985443 47888888 899999999999976
No 40
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.67 E-value=3e-16 Score=154.76 Aligned_cols=59 Identities=10% Similarity=0.138 Sum_probs=50.8
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCC--cEEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G--~~i~ad~VI~a~~~~~ 330 (529)
+..++..|.+.++++|++|+++++|++|..++++.+ .|++.+| .+++||.||+|+|.+.
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSE-EEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceE-EEEECCCceeEEEeCEEEECCCcch
Confidence 568899999999999999999999999998655534 5888888 3799999999999985
No 41
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.65 E-value=6.1e-15 Score=156.71 Aligned_cols=58 Identities=19% Similarity=0.209 Sum_probs=51.0
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
+..++..|.+.+++.|++|+++++|++|..++++ + .|++.+|++++||.||+|+|.+.
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v-~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDC-W-LLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-E-EEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCe-E-EEEECCCCEEECCEEEECCCcch
Confidence 5788999999999999999999999999985444 3 78888887899999999999984
No 42
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.64 E-value=9.1e-15 Score=155.54 Aligned_cols=58 Identities=14% Similarity=0.177 Sum_probs=50.2
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCc-EEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~-~i~ad~VI~a~~~~~ 330 (529)
+..++..|.+.+++.|++|+++++|++|..++++ + .|++.+|+ +++||.||+|+|.+.
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v-~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ-W-QLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS-E-EEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe-E-EEEeCCCcEEEECCEEEECCCcch
Confidence 5788999999999999999999999999986554 3 68888887 799999999999984
No 43
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.63 E-value=3.5e-15 Score=148.30 Aligned_cols=205 Identities=11% Similarity=0.054 Sum_probs=110.6
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCchhhhHHHHHhhc
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEK 350 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~~~~ 350 (529)
+..++..|.+.++++|++|+++++|++|+.++++ + .|++.+| +++||.||+|+|.+.. .+++... ..
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~-~v~~~~g-~~~a~~vV~A~G~~~~-~l~~~~g---------~~ 215 (389)
T 2gf3_A 149 SENCIRAYRELAEARGAKVLTHTRVEDFDISPDS-V-KIETANG-SYTADKLIVSMGAWNS-KLLSKLN---------LD 215 (389)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC-E-EEEETTE-EEEEEEEEECCGGGHH-HHGGGGT---------EE
T ss_pred HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe-E-EEEeCCC-EEEeCEEEEecCccHH-HHhhhhc---------cC
Confidence 5688899999999999999999999999985444 3 5778777 7999999999998753 3322110 01
Q ss_pred CCCcCeEEEEEEecCCc--cc---ccCcccccCCcceeeeccccccccccCCCCceEEEEec-----CccccCCCC--hH
Q 009678 351 LVGVPVINIHIWFDRKL--KN---TYDHLLFSSSLLSVYADMSLTCKEYYNPNQSMLELVFA-----PAEEWISCS--DS 418 (529)
Q Consensus 351 ~~~~~~~~v~l~~~~~~--~~---~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~--~~ 418 (529)
+...+.....+.++.+. +. .........+....|.. + .+++..++..... ....+.... ++
T Consensus 216 ~pl~~~rg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~y~~-----p--~~~g~~~~iG~~~~~~~~~~~~~~~~~~~~~ 288 (389)
T 2gf3_A 216 IPLQPYRQVVGFFESDESKYSNDIDFPGFMVEVPNGIYYGF-----P--SFGGCGLKLGYHTFGQKIDPDTINREFGVYP 288 (389)
T ss_dssp CCCEEEEEEEEEECCCHHHHBGGGTCCEEEEEETTEEEEEE-----C--BSTTCCEEEEESSCCEECCTTTCCCCTTSSH
T ss_pred CceEEEEEEEEEEecCcccccccccCCEEEEeCCCCcEEEc-----C--CCCCCcEEEEEcCCCCccCcccccCccCCCH
Confidence 12223333334444321 00 00000000000011110 0 0122133322211 111121222 45
Q ss_pred HHHHHHHHHHHHhCCCCccccccccEEEEEEEeccCCcccccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchHHHHH
Q 009678 419 EIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVL 498 (529)
Q Consensus 419 ~~~~~~l~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~ 498 (529)
+..+.+++.+.++||.... .+.. .| .+....+++..+..-. ....+|||++..+.+. ++.-|..
T Consensus 289 ~~~~~l~~~~~~~~P~l~~------~~~~-~w----~g~r~~t~D~~p~ig~-~~~~~~l~~a~G~~g~----G~~~ap~ 352 (389)
T 2gf3_A 289 EDESNLRAFLEEYMPGANG------ELKR-GA----VCMYTKTLDEHFIIDL-HPEHSNVVIAAGFSGH----GFKFSSG 352 (389)
T ss_dssp HHHHHHHHHHHHHCGGGCS------CEEE-EE----EEEEEECTTSCCEEEE-ETTEEEEEEEECCTTC----CGGGHHH
T ss_pred HHHHHHHHHHHHhCCCCCC------CceE-EE----EEEeccCCCCCeEEcc-CCCCCCEEEEECCccc----cccccHH
Confidence 5568999999999997421 1211 12 2333333432221111 1125789998866543 6677899
Q ss_pred HHHHHHHHHHHHH
Q 009678 499 SGKLCAQAIVQDY 511 (529)
Q Consensus 499 Sg~~aA~~i~~~l 511 (529)
.|+.+|+.|...-
T Consensus 353 ~g~~la~~i~~~~ 365 (389)
T 2gf3_A 353 VGEVLSQLALTGK 365 (389)
T ss_dssp HHHHHHHHHHHSC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999998653
No 44
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.62 E-value=6.9e-14 Score=138.51 Aligned_cols=199 Identities=14% Similarity=0.090 Sum_probs=109.7
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCchhhhHHHHHhhc
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEK 350 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~~~~ 350 (529)
+..+.+.|.+.+++.|++|+++++|++|..+ ++.+ .|++.+| +++||.||+|+|.+... +++... ..
T Consensus 163 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~~s~~-l~~~~~---------~~ 229 (382)
T 1ryi_A 163 PYFVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSG-DVWANHVVVASGVWSGM-FFKQLG---------LN 229 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETTE-EEEEEEEEECCGGGTHH-HHHHTT---------CC
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCc-eEEcCEEEECCChhHHH-HHHhcC---------CC
Confidence 4678889999999999999999999999974 4444 6888877 89999999999987431 211000 01
Q ss_pred CCCcCeEEEEEEecCCcccccCcccccCCcceeeeccccccccccCC-CCceEEEEecCccccCCCChHHHHHHHHHHHH
Q 009678 351 LVGVPVINIHIWFDRKLKNTYDHLLFSSSLLSVYADMSLTCKEYYNP-NQSMLELVFAPAEEWISCSDSEIIDATMKELA 429 (529)
Q Consensus 351 ~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~ 429 (529)
+...+.....+.++.+. ......++.. .....|. +..++.........+....+++..+.+++.+.
T Consensus 230 ~~~~~~~g~~~~~~~~~-~~~~~~~~~~------------~~~~~p~~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~~~ 296 (382)
T 1ryi_A 230 NAFLPVKGECLSVWNDD-IPLTKTLYHD------------HCYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAK 296 (382)
T ss_dssp CCCEEEEEEEEEEECCS-SCCCSEEEET------------TEEEEECTTSEEEEECCCEETCCCCSCCHHHHHHHHHHHH
T ss_pred CceeccceEEEEECCCC-CCccceEEcC------------CEEEEEcCCCeEEEeecccccCCCCCCCHHHHHHHHHHHH
Confidence 11122322333443321 0111111110 0011111 12222221111123333456777889999999
Q ss_pred HhCCCCccccccccEEEEEEEeccCCcccccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHH
Q 009678 430 KLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 509 (529)
Q Consensus 430 ~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i~~ 509 (529)
+++|..... .+. ..|. +.....++..+..-. ....+|+|+++.+.+ .++..|..+|+.+|+.|..
T Consensus 297 ~~~p~l~~~-----~~~-~~w~----g~~~~t~d~~p~ig~-~~~~~~l~~~~G~~g----~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 297 TMLPAIQNM-----KVD-RFWA----GLRPGTKDGKPYIGR-HPEDSRILFAAGHFR----NGILLAPATGALISDLIMN 361 (382)
T ss_dssp HHCGGGGGS-----EEE-EEEE----EEEEECSSSCCEEEE-ETTEEEEEEEECCSS----CTTTTHHHHHHHHHHHHTT
T ss_pred HhCCCcCCC-----cee-eEEE----EecccCCCCCcEecc-CCCcCCEEEEEcCCc----chHHHhHHHHHHHHHHHhC
Confidence 999974221 121 1221 222222322111100 012578999887654 3677799999999999876
Q ss_pred H
Q 009678 510 D 510 (529)
Q Consensus 510 ~ 510 (529)
.
T Consensus 362 ~ 362 (382)
T 1ryi_A 362 K 362 (382)
T ss_dssp C
T ss_pred C
Confidence 4
No 45
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.61 E-value=9e-15 Score=145.70 Aligned_cols=57 Identities=18% Similarity=0.195 Sum_probs=48.2
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
+..++..|.+.+++.|++|+++++|++|..++++ + .|++.+| +++||.||+|+|.+.
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-v-~v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATLRAGETVTELVPDADG-V-SVTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-E-EEEESSC-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCe-E-EEEECCC-EEEcCEEEEcCCcCh
Confidence 5678889999999999999999999999975443 3 4777777 799999999999874
No 46
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.58 E-value=6.4e-15 Score=145.43 Aligned_cols=62 Identities=19% Similarity=0.213 Sum_probs=51.4
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCC
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 336 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~ 336 (529)
+..+++.|.+.+++.|++|+++++|++|..++++ + .|++.+| +++||.||+|+|++.- .+++
T Consensus 148 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-~-~v~~~~g-~~~a~~vV~a~G~~s~-~l~~ 209 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG-V-TIETADG-EYQAKKAIVCAGTWVK-DLLP 209 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-E-EEEESSC-EEEEEEEEECCGGGGG-GTST
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE-E-EEEECCC-eEEcCEEEEcCCccHH-hhcc
Confidence 5688899999999999999999999999985444 3 5888888 6999999999999863 4443
No 47
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.57 E-value=1.8e-15 Score=153.27 Aligned_cols=59 Identities=22% Similarity=0.258 Sum_probs=50.5
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEec--------------CCCCEEEEEEcCCcEE--ecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELN--------------DDGTVKNFLLTNGNVI--DGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~--------------~~~~~~~v~~~~G~~i--~ad~VI~a~~~~~ 330 (529)
+..++..|.+.++++|++|+++++|++|..+ +++.+++|++.+| ++ +||.||+|+|++.
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 5688999999999999999999999999872 2445567888888 68 9999999999985
No 48
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.48 E-value=1e-12 Score=135.86 Aligned_cols=59 Identities=19% Similarity=0.188 Sum_probs=49.9
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcC---C--cEEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~---G--~~i~ad~VI~a~~~~~ 330 (529)
+..++..|++.+.++|++|+++++|++|..+ ++.+++|++.+ | .+++||.||+|+|++.
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 5788999999999999999999999999984 55666777653 3 3699999999999986
No 49
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.47 E-value=5.2e-12 Score=125.50 Aligned_cols=39 Identities=33% Similarity=0.616 Sum_probs=35.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCce
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGK 95 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~ 95 (529)
++||+|||||++||++|+.|+++|++|+|+|+++.+|..
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~ 42 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP 42 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCC
Confidence 589999999999999999999999999999998776643
No 50
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.46 E-value=1.8e-13 Score=138.11 Aligned_cols=59 Identities=24% Similarity=0.443 Sum_probs=50.9
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
...+++.|.+.+++.|++|+++++|++|..+ ++.+++|++.+|++++||.||+|+|.+.
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 4577888999999999999999999999974 5555689999997799999999998765
No 51
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.46 E-value=5.1e-13 Score=137.10 Aligned_cols=58 Identities=26% Similarity=0.323 Sum_probs=48.8
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCc---EEecC-EEEEccCHHH
Q 009678 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGD-AYVFATPVDI 330 (529)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~---~i~ad-~VI~a~~~~~ 330 (529)
.++..|.+.+++.|++|+++++|++|..++++++++|.+.++. +|+|| .||+|||.+.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 7889999999999999999999999998656788888765432 58995 9999998764
No 52
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.42 E-value=2.6e-12 Score=133.68 Aligned_cols=60 Identities=22% Similarity=0.259 Sum_probs=49.3
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEc--CCc--EEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~--~G~--~i~ad~VI~a~~~~~ 330 (529)
...+...|.+.+++.|++|+++++|++|..++++++++|.+. +|+ +++||.||+|+|.+.
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 254 GAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 357788899999999999999999999998544777677654 675 689999999998753
No 53
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.42 E-value=8.4e-12 Score=122.51 Aligned_cols=39 Identities=31% Similarity=0.335 Sum_probs=35.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG 94 (529)
.++||+|||||++|+++|++|+++|.+|+|+|+....+|
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 468999999999999999999999999999999876554
No 54
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.42 E-value=3.7e-12 Score=127.80 Aligned_cols=60 Identities=17% Similarity=0.159 Sum_probs=49.9
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCc--EEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN--VIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~--~i~ad~VI~a~~~~~ 330 (529)
...+...|.+.+++.|++|+++++|++|..++++..+.|.+.+|+ +++||.||.|+|.+.
T Consensus 105 r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 105 RGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 345667788888888999999999999998666665677888997 699999999999863
No 55
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.41 E-value=6.2e-14 Score=152.40 Aligned_cols=58 Identities=24% Similarity=0.237 Sum_probs=51.3
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
+..++..|.+.++++|++|+++++|++|..+ ++.+++|+|.+| +++||+||+|+|.+.
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEEe-CCEEEEEEECCc-EEECCEEEECCccch
Confidence 6688999999999999999999999999974 455667888888 899999999999986
No 56
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.40 E-value=2.4e-11 Score=120.83 Aligned_cols=58 Identities=10% Similarity=0.112 Sum_probs=46.1
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEE---cCCcEEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~---~~G~~i~ad~VI~a~~~~~ 330 (529)
..+.+.|.+.+++.|++|+++++|++|..+ ++.+.+|++ .++++++||.||.|+|.+.
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 455667888888889999999999999985 555555666 3455899999999999764
No 57
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.40 E-value=3.7e-12 Score=127.14 Aligned_cols=54 Identities=24% Similarity=0.370 Sum_probs=43.5
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
..+.+.|.+.+.+ ++|+++++|++|+.++++ + .|++.+|++++||.||.|.|.+
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~-v-~v~~~~g~~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEEDADG-V-TVWFTDGSSASGDLLIAADGSH 180 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEEETTE-E-EEEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEecCCc-E-EEEEcCCCEEeeCEEEECCCcC
Confidence 3455667777665 789999999999985444 3 5888999899999999999985
No 58
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.40 E-value=9.1e-13 Score=130.87 Aligned_cols=57 Identities=16% Similarity=0.303 Sum_probs=48.9
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
...+.+.|.+.+++.|++|+++++|++|..++++ +.|++.+| +++||.||+|+|.+.
T Consensus 131 ~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~--~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 131 AKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG--FRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECCc-EEEeeEEEECCCCcc
Confidence 4578888999999999999999999999875443 36888888 899999999999875
No 59
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.39 E-value=3.5e-12 Score=132.48 Aligned_cols=60 Identities=27% Similarity=0.281 Sum_probs=49.1
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEc--CCc--EEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~--~G~--~i~ad~VI~a~~~~~ 330 (529)
...++..|.+.+++.|++|+++++|++|..++++++++|.+. +|+ +++||.||+|+|.+.
T Consensus 249 ~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 249 GPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 346788899999999999999999999998543777677654 675 589999999998754
No 60
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.38 E-value=3.3e-11 Score=124.63 Aligned_cols=63 Identities=19% Similarity=0.242 Sum_probs=47.7
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCC---CEEEEEEcCC---cEEecCEEEEccCHHH-HhhhC
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDG---TVKNFLLTNG---NVIDGDAYVFATPVDI-LKLQL 335 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~---~~~~v~~~~G---~~i~ad~VI~a~~~~~-~~~l~ 335 (529)
..+...|.+.+++.|++|+++++|++|+.++++ .+ .+++.++ .+++||.||.|.|.+. +++.+
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v-~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~l 189 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGV-TARLAGPDGEYDLRAGYLVGADGNRSLVRESL 189 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEE-EEEEEETTEEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccE-EEEEEcCCCeEEEEeCEEEECCCCcchHHHHc
Confidence 456677888888889999999999999986551 22 4555555 6799999999999863 44443
No 61
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.37 E-value=2.2e-11 Score=126.12 Aligned_cols=58 Identities=17% Similarity=0.179 Sum_probs=46.8
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEc-CC--cEEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~-~G--~~i~ad~VI~a~~~~~ 330 (529)
..+...|.+.+++.|++++++++|++|..+ ++.++.|++. +| .+++||.||.|+|.+.
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 456677888888899999999999999974 3444577776 66 4799999999999864
No 62
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.35 E-value=1.3e-12 Score=127.69 Aligned_cols=192 Identities=11% Similarity=-0.026 Sum_probs=105.2
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhhhCCCchhhhHHHHHhhc
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEK 350 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~~~~ 350 (529)
+..++..|.+.++++|++|+. ++|++|+.. + .++||.||+|+|.+.. .++++
T Consensus 141 p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~------------~-~~~a~~VV~A~G~~s~-~l~~~------------- 192 (351)
T 3g3e_A 141 GKNYLQWLTERLTERGVKFFQ-RKVESFEEV------------A-REGADVIVNCTGVWAG-ALQRD------------- 192 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-CCCCCHHHH------------H-HTTCSEEEECCGGGGG-GTSCC-------------
T ss_pred HHHHHHHHHHHHHHCCCEEEE-EEeCCHHHh------------h-cCCCCEEEECCCcChH-hhcCC-------------
Confidence 678999999999999999998 899888642 1 2679999999999874 34332
Q ss_pred CCCcCeEEEEEEecCCcccccCccccc-CCcceeeeccccccccccCCCCceEEEEecCccccCCCChHHHHHHHHHHHH
Q 009678 351 LVGVPVINIHIWFDRKLKNTYDHLLFS-SSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELA 429 (529)
Q Consensus 351 ~~~~~~~~v~l~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~ 429 (529)
....+.....+.++.+. ....++. .+.. +... .....|....++.........+....+++..+.+++.+.
T Consensus 193 ~~l~p~rg~~~~~~~~~---~~~~~~~~~~~~----~~~~-~~y~~p~~~~~~iGg~~~~~~~~~~~~~~~~~~l~~~~~ 264 (351)
T 3g3e_A 193 PLLQPGRGQIMKVDAPW---MKHFILTHDPER----GIYN-SPYIIPGTQTVTLGGIFQLGNWSELNNIQDHNTIWEGCC 264 (351)
T ss_dssp TTCEEEEEEEEEEECTT---CCSEEEECCTTT----CTTC-SCEEEECSSCEEEECCCEETCCCCSCCHHHHHHHHHHHH
T ss_pred CceeecCCcEEEEeCCC---cceEEEeccccC----CCCc-eeEEEeCCCcEEEeeeeecCCCCCCCCHHHHHHHHHHHH
Confidence 11123333334444331 1111111 0000 0000 000112112333221111123333446677889999999
Q ss_pred HhCCCCccccccccEEEEEEEeccCCcccccCCCCCCCC-C-CCCCC-CCCeEEecccccCCCCCchHHHHHHHHHHHHH
Q 009678 430 KLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR-P-LQRSP-VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 506 (529)
Q Consensus 430 ~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~-~~~~~-~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~ 506 (529)
++||.... ..+. ..| .|....+++ .+.. + ....| .+|||++..+.+ .|+..|...|+.+|+.
T Consensus 265 ~~~P~l~~-----~~i~-~~w----~G~r~~t~D-~p~~~~~ig~~~~~~~~~~~~G~~g----~G~~~ap~~g~~la~l 329 (351)
T 3g3e_A 265 RLEPTLKN-----ARII-GER----TGFRPVRPQ-IRLEREQLRTGPSNTEVIHNYGHGG----YGLTIHWGCALEAAKL 329 (351)
T ss_dssp HHCGGGGG-----CEEE-EEE----EEEEEECSS-CEEEEEEECCSSSCEEEEEEECCTT----CHHHHHHHHHHHHHHH
T ss_pred HhCCCccC-----CcEe-eee----EeeCCCCCC-ccceeeeccCCCCCCeEEEEeCCCc----chHhhhHHHHHHHHHH
Confidence 99997421 1222 222 233333333 1100 0 00122 578998876544 3788899999999999
Q ss_pred HHHHHhh
Q 009678 507 IVQDYVL 513 (529)
Q Consensus 507 i~~~l~~ 513 (529)
|.+.++.
T Consensus 330 i~~~~~~ 336 (351)
T 3g3e_A 330 FGRILEE 336 (351)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9988764
No 63
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.35 E-value=1e-10 Score=119.58 Aligned_cols=58 Identities=21% Similarity=0.175 Sum_probs=49.4
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEE---cCCc--EEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~---~~G~--~i~ad~VI~a~~~~~ 330 (529)
+..++..|.+.+.++|++|+++++|++|..++ .+++|++ .+|+ +++||.||+|+|++.
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 67899999999999999999999999999743 4556776 3675 799999999999986
No 64
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.33 E-value=6.3e-11 Score=122.54 Aligned_cols=64 Identities=13% Similarity=0.098 Sum_probs=47.7
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCC-cEEecCEEEEccCHH-HHhhhC
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-NVIDGDAYVFATPVD-ILKLQL 335 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G-~~i~ad~VI~a~~~~-~~~~l~ 335 (529)
..+.+.|.+.+++.|++|+++++|++|+.++++..+.+.+.+| ++++||.||.|.|.+ .+++.+
T Consensus 148 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~l 213 (570)
T 3fmw_A 148 SRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRSTVRRLA 213 (570)
T ss_dssp HHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSCHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCchHHHHc
Confidence 3456677888888899999999999999865554323333778 689999999999985 344444
No 65
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.33 E-value=5.7e-12 Score=128.58 Aligned_cols=58 Identities=28% Similarity=0.480 Sum_probs=50.6
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
..+.+.|.+.+++.|++|+++++|++|..+ ++.+.+|++.+|+++.||.||+|+|.+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHME-DGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEES-SSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 467778889999999999999999999984 5566689999998899999999999865
No 66
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.31 E-value=1.3e-11 Score=127.93 Aligned_cols=60 Identities=7% Similarity=0.015 Sum_probs=49.1
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEc---CCc--EEecCEEEEccCHHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDIL 331 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~---~G~--~i~ad~VI~a~~~~~~ 331 (529)
+..++..+++.+.++|++|+++++|++|..+ ++.+++|++. +|+ +++||.||+|+|++.-
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~ 251 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVD 251 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHH
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHH
Confidence 5678888999999999999999999999984 4556667643 343 6999999999999863
No 67
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.30 E-value=3.8e-10 Score=115.07 Aligned_cols=61 Identities=11% Similarity=0.098 Sum_probs=46.6
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCc---EEecCEEEEccCHHH-HhhhC
Q 009678 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGDAYVFATPVDI-LKLQL 335 (529)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~---~i~ad~VI~a~~~~~-~~~l~ 335 (529)
.+.+.|.+.+.+.|++|+++++|++|+.++++ + .|++.+|+ +++||.||.|.|.+. +++.+
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l 171 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAG-V-TVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAA 171 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTE-E-EEEEEETTEEEEEEESEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe-E-EEEEEcCCCCEEEEeCEEEECCCcchHHHHHc
Confidence 45566778888889999999999999985554 3 46666664 799999999999863 44444
No 68
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.30 E-value=2.5e-10 Score=118.57 Aligned_cols=59 Identities=24% Similarity=0.289 Sum_probs=48.5
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcC------C---------cEEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------G---------NVIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~------G---------~~i~ad~VI~a~~~~~ 330 (529)
..+.+.|.+.+++.|++|+++++|++|..++++.+.+|++.+ | .+++||.||.|+|.+.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 356677888888889999999999999986667777787763 3 5799999999999863
No 69
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.29 E-value=5.7e-10 Score=113.75 Aligned_cols=62 Identities=11% Similarity=-0.009 Sum_probs=47.6
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCc---EEecCEEEEccCHHH-HhhhC
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGDAYVFATPVDI-LKLQL 335 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~---~i~ad~VI~a~~~~~-~~~l~ 335 (529)
..+...|.+.+.+.|++|+++++|++|+.++++ + .|++.+|+ +++||.||.|.|.+. +++.+
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l 172 (499)
T 2qa2_A 107 STTESVLEEWALGRGAELLRGHTVRALTDEGDH-V-VVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAA 172 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-E-EEEEECSSCEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-E-EEEEEcCCCcEEEEeCEEEEccCcccHHHHHc
Confidence 345566778888889999999999999986554 3 46666664 799999999999864 44444
No 70
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.26 E-value=3.1e-11 Score=119.43 Aligned_cols=59 Identities=14% Similarity=0.125 Sum_probs=48.7
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecC---CCCEEEEEEcCCcEEecCEEEEccCHHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELND---DGTVKNFLLTNGNVIDGDAYVFATPVDIL 331 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~---~~~~~~v~~~~G~~i~ad~VI~a~~~~~~ 331 (529)
...+.+.|.+.+++.|++|+++++|++|..++ ++.+ .|++.+| +++||.||+|+|.+..
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~-~v~~~~g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRF-VLQVNST-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCE-EEEETTE-EEEESEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeE-EEEECCC-EEECCEEEECCCCccC
Confidence 56788889999999999999999999998741 3333 6888777 7999999999988763
No 71
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.25 E-value=5.9e-10 Score=114.37 Aligned_cols=58 Identities=16% Similarity=0.088 Sum_probs=45.5
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEE--EcCCc--EEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFL--LTNGN--VIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~--~~~G~--~i~ad~VI~a~~~~~ 330 (529)
..+.+.|.+.+++.|++|+++++|++|..+ ++.+.+|+ +.+|+ +++||.||.|+|.+.
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 456677888888899999999999999984 55544444 45674 799999999999853
No 72
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.24 E-value=9.7e-11 Score=121.59 Aligned_cols=59 Identities=29% Similarity=0.348 Sum_probs=47.5
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEc--CCc--EEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~--~G~--~i~ad~VI~a~~~~~ 330 (529)
..+...|.+.+++.|++|+++++|++|..++++++++|.+. +|+ ++.||.||+|+|.+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 46788899999999999999999999987542677777664 674 589999999998754
No 73
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.23 E-value=9.9e-11 Score=121.55 Aligned_cols=59 Identities=17% Similarity=0.068 Sum_probs=48.6
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEE---cCCc--EEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~---~~G~--~i~ad~VI~a~~~~~ 330 (529)
..++..|.+.+++.|++|+++++|++|..++++++.+|.. .+|+ ++.|+.||+|||.+.
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 5678889999989999999999999999743567767764 4665 589999999999854
No 74
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.22 E-value=2.1e-09 Score=108.65 Aligned_cols=58 Identities=21% Similarity=0.127 Sum_probs=45.6
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEc---CCc--EEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~---~G~--~i~ad~VI~a~~~~~ 330 (529)
..+.+.|.+.+.+.|++|+++++|++|..+ ++.+.+|++. +|+ +++||.||.|+|.+.
T Consensus 100 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 100 PLYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 345667888888889999999999999874 4555455543 675 799999999999864
No 75
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.20 E-value=7.5e-11 Score=121.24 Aligned_cols=60 Identities=13% Similarity=0.014 Sum_probs=44.2
Q ss_pred CccchHHHHHHHHH-cCcEEEecceeeEEEecCCC------CEEEEEEc---CCc--EEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDG------TVKNFLLT---NGN--VIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~------~~~~v~~~---~G~--~i~ad~VI~a~~~~~ 330 (529)
...+...|.+.+++ .|++|++++.|++|..++++ ++.+|.+. +|+ ++.||.||+|||.+.
T Consensus 137 g~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 137 GREVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp -----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 34677778888888 69999999999999973334 67677664 565 689999999998764
No 76
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.18 E-value=1.1e-10 Score=122.34 Aligned_cols=58 Identities=12% Similarity=0.137 Sum_probs=47.6
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEE---cCCc--EEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~---~~G~--~i~ad~VI~a~~~~~ 330 (529)
..++..|.+.+.+.|++|++++.|++|.. +++++.+|.+ .+|+ .+.||.||+|||.+.
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 46888899999889999999999999987 4566667654 4675 489999999998764
No 77
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.18 E-value=7.6e-12 Score=124.61 Aligned_cols=57 Identities=16% Similarity=0.227 Sum_probs=44.7
Q ss_pred CccchHHHHHHHHHcCcEEEecceee---------EEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQ---------KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~---------~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
+..+...|.+.+++.|++|+++++|+ +|..+ ++.+ .|++.+| +++||.||+|+|.+.
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECCc-EEECCEEEECCCccH
Confidence 56788999999999999999999999 88764 3444 6778777 899999999999875
No 78
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.16 E-value=1.6e-09 Score=108.16 Aligned_cols=44 Identities=16% Similarity=0.266 Sum_probs=37.4
Q ss_pred CcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 286 GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 286 G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
+..|+++++|++++..+++.+ .|++.+|++++||.||-|-|.+.
T Consensus 123 ~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVgADG~~S 166 (412)
T 4hb9_A 123 ANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVGADGSNS 166 (412)
T ss_dssp TTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECCCTTC
T ss_pred cceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEECCCCCc
Confidence 457999999999998666655 68899999999999999998853
No 79
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.15 E-value=9e-09 Score=108.25 Aligned_cols=65 Identities=12% Similarity=0.151 Sum_probs=46.6
Q ss_pred ccchHHHHHHHHHcCc--EEEecceeeEEEecCC--CCEEEEEEc------CC--cEEecCEEEEccCHHH-HhhhCC
Q 009678 272 ERLCLPIVEHIQSLGG--EVRLNSRVQKIELNDD--GTVKNFLLT------NG--NVIDGDAYVFATPVDI-LKLQLP 336 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~--~i~~~t~V~~I~~~~~--~~~~~v~~~------~G--~~i~ad~VI~a~~~~~-~~~l~~ 336 (529)
..+...|.+.+.+.|+ +|+++++|++|+.+++ +..+.|++. +| ++++||.||.|.|.+. +++.+.
T Consensus 141 ~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 218 (639)
T 2dkh_A 141 ARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG 218 (639)
T ss_dssp HHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC
Confidence 3566678888888887 9999999999998542 212245443 56 4799999999999863 444443
No 80
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.14 E-value=8.4e-10 Score=113.42 Aligned_cols=59 Identities=17% Similarity=0.183 Sum_probs=51.0
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
...+...|.+.+++.|++++++ +|++|..++++.++.|++.+|++++||.||.|+|.+.
T Consensus 172 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 172 ADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 4567788888888899999999 9999998666766788898998899999999999874
No 81
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.12 E-value=6.4e-10 Score=115.59 Aligned_cols=58 Identities=10% Similarity=0.067 Sum_probs=48.1
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEE---cCCc--EEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~---~~G~--~i~ad~VI~a~~~~~ 330 (529)
..++..|.+.+.+.|++|++++.|++|..+ ++++.+|.+ .+|+ .+.|+.||+|||.+.
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 468888999988899999999999999874 567767765 4675 589999999998865
No 82
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.11 E-value=2e-10 Score=118.17 Aligned_cols=42 Identities=31% Similarity=0.461 Sum_probs=38.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCcee
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~ 96 (529)
...+||+|||||++|+++|+.|++.|++|+|+|+++.+||..
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw 60 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVW 60 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 346899999999999999999999999999999999999865
No 83
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.11 E-value=2.6e-10 Score=113.33 Aligned_cols=64 Identities=19% Similarity=0.252 Sum_probs=50.2
Q ss_pred CccchHHHHHHHHHc-CcEEEecceeeEEEecCCCCEE-EEEEcCCcEEecCEEEEccCHHH-HhhhC
Q 009678 271 PERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVK-NFLLTNGNVIDGDAYVFATPVDI-LKLQL 335 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~~~~-~v~~~~G~~i~ad~VI~a~~~~~-~~~l~ 335 (529)
...+.+.|.+.+++. |++|+++++|++|+.++++ ++ .|++.+|++++||.||.|+|.+. +++.+
T Consensus 106 r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~l 172 (399)
T 2x3n_A 106 CESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLNDGRVLRPRVVVGADGIASYVRRRL 172 (399)
T ss_dssp HHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETTSCEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECCCCEEECCEEEECCCCChHHHHHh
Confidence 346667788888887 8999999999999985554 32 47788898899999999999854 34444
No 84
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.11 E-value=1.1e-09 Score=108.63 Aligned_cols=61 Identities=23% Similarity=0.308 Sum_probs=45.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccC-CceeEeeccCCCCeeeeeeeeecCCcchHHHHHHHcCCCC
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL-GGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIND 132 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~-GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~ 132 (529)
..+||+|||||++||++|+.|++.|++|+|+|++... .+.... + ...++..++++++|+..
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g--------------~--~l~~~~~~~l~~~g~~~ 65 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTG--------------I--VVQPELVHYLLEQGVEL 65 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCE--------------E--ECCHHHHHHHHHTTCCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc--------------c--ccChhHHHHHHHcCCcc
Confidence 4579999999999999999999999999999998653 111100 0 11355678888888754
No 85
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.10 E-value=2.7e-10 Score=117.03 Aligned_cols=56 Identities=13% Similarity=0.073 Sum_probs=43.8
Q ss_pred hHHHHHHHHHcCc--EEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 275 CLPIVEHIQSLGG--EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 275 ~~~l~~~l~~~G~--~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
.+.+.+.+++.|+ .|+++++|+++..++++..+.|++.+|+++.||.||+|+|...
T Consensus 90 ~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 90 LEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp HHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCC
T ss_pred HHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccc
Confidence 3345555566676 8999999999998655445578999998899999999999643
No 86
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.10 E-value=3.9e-10 Score=106.28 Aligned_cols=41 Identities=32% Similarity=0.409 Sum_probs=37.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CCCeEEEeccccCCcee
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLGGKI 96 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~-g~~V~llEa~~~~GG~~ 96 (529)
.++||+|||||++|+++|+.|++. |.+|+|+|+...+||.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 457999999999999999999997 99999999998887643
No 87
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.08 E-value=1.1e-09 Score=113.16 Aligned_cols=59 Identities=15% Similarity=0.252 Sum_probs=50.7
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
...+...|.+.+++.|++++.+ .|++|..++++.++.|++.+|++++||.||.|+|.+.
T Consensus 164 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 164 AHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 4677888899998899999999 8999998666666678888888899999999999864
No 88
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.08 E-value=8.2e-10 Score=108.92 Aligned_cols=54 Identities=26% Similarity=0.358 Sum_probs=45.5
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
..+.+.|.+.+.+.|++|+++++|++|+. ++ .|++.+|++++||.||.|+|.+.
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccH
Confidence 45667788888888999999999999986 44 37788898899999999999853
No 89
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.05 E-value=2.2e-09 Score=110.28 Aligned_cols=58 Identities=21% Similarity=0.275 Sum_probs=47.8
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCE--EEEEEcCCc-EEecCEEEEccCHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTV--KNFLLTNGN-VIDGDAYVFATPVD 329 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~--~~v~~~~G~-~i~ad~VI~a~~~~ 329 (529)
..+.+.+.+.+++.|++|+++++|++|..++++.+ +.|++.+|+ ++.||.||+|+|..
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQ 315 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCc
Confidence 45677888899999999999999999987545543 357788887 79999999999864
No 90
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.04 E-value=7.5e-10 Score=108.13 Aligned_cols=40 Identities=33% Similarity=0.578 Sum_probs=37.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCcee
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~ 96 (529)
++||+|||||++|+++|+.|+++|++|+|+|+++.+||..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~ 42 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAW 42 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcc
Confidence 4799999999999999999999999999999999988864
No 91
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.04 E-value=3.5e-10 Score=120.16 Aligned_cols=45 Identities=33% Similarity=0.530 Sum_probs=41.3
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEe
Q 009678 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAA 98 (529)
Q Consensus 54 ~~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~ 98 (529)
.+..+||+|||||++||+||+.|+++|++|+|+|+++.+||.+..
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 456789999999999999999999999999999999999998654
No 92
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.04 E-value=9.8e-10 Score=111.98 Aligned_cols=40 Identities=33% Similarity=0.404 Sum_probs=36.8
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCc
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG 94 (529)
...+||+|||||++||++|..|++.|++|+|+|+++.+|+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~ 129 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR 129 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC
Confidence 4578999999999999999999999999999999987764
No 93
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.04 E-value=1.4e-09 Score=113.23 Aligned_cols=58 Identities=19% Similarity=0.143 Sum_probs=47.0
Q ss_pred ccchHHHHHHHHHcC-cEEEecceeeEEEecCCCCEEEEEE---cCCc--EEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G-~~i~~~t~V~~I~~~~~~~~~~v~~---~~G~--~i~ad~VI~a~~~~~ 330 (529)
..+...|.+.+.+.| ++|++++.|++|..+ ++.+.+|.. .+|+ .+.|+.||+|+|.+.
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 467788888888888 999999999999974 566666643 5675 689999999999864
No 94
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.03 E-value=4.3e-10 Score=109.04 Aligned_cols=45 Identities=38% Similarity=0.495 Sum_probs=38.5
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCCeEEEecc----ccCCceeEe
Q 009678 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR----DVLGGKIAA 98 (529)
Q Consensus 54 ~~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~----~~~GG~~~~ 98 (529)
.+.++||+|||||++||++|+.|+++|++|+|+|+. ..+||....
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~ 67 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTT 67 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccccc
Confidence 346789999999999999999999999999999994 478887653
No 95
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.03 E-value=3.2e-10 Score=115.49 Aligned_cols=56 Identities=21% Similarity=0.260 Sum_probs=47.2
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
..+...+.+.+++.|++|+++++|++|+.+++ .+ .|++.+|+++.||.||+|+|..
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~-~v-~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQSTEN-CY-NVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEECSS-SE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCC-EE-EEEECCCcEEEcCEEEEeeCCC
Confidence 35677788888999999999999999997444 34 6888899889999999999864
No 96
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.03 E-value=1.9e-09 Score=102.45 Aligned_cols=41 Identities=34% Similarity=0.426 Sum_probs=37.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC--CCCeEEEeccccCCcee
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLGGKI 96 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~--g~~V~llEa~~~~GG~~ 96 (529)
.++||+|||||++||++|+.|+++ |++|+|+|+...+||.+
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 468999999999999999999997 99999999998887643
No 97
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.03 E-value=6.9e-10 Score=110.11 Aligned_cols=62 Identities=8% Similarity=0.060 Sum_probs=46.3
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEE-cCCc--EEecCEEEEccCHHH-HhhhC
Q 009678 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPVDI-LKLQL 335 (529)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~-~~G~--~i~ad~VI~a~~~~~-~~~l~ 335 (529)
.+.+.|.+.+.+.|++|+++++|++|..++++.+ .|++ .+|+ +++||.||.|.|.+. +++.+
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l 169 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGFHGISRQSI 169 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCTTCSTGGGS
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCCCcHHHHhc
Confidence 4556677777788999999999999987433333 4665 6886 699999999999864 33444
No 98
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.03 E-value=9.1e-10 Score=113.71 Aligned_cols=42 Identities=26% Similarity=0.478 Sum_probs=38.8
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCcee
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~ 96 (529)
+..+||+|||||++|+++|+.|++.|++|+|+|+++.+||..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w 55 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVW 55 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 356899999999999999999999999999999999999865
No 99
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.02 E-value=1.3e-09 Score=111.53 Aligned_cols=59 Identities=14% Similarity=0.001 Sum_probs=47.6
Q ss_pred cchHHHHHHHHH-cCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhh
Q 009678 273 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKL 333 (529)
Q Consensus 273 ~l~~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ 333 (529)
.+...|.+.+++ .|++| +++.|++|.. +++.+.+|.+.+|+++.||.||+|||.+....
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~ 183 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGV 183 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTTCBTCE
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCCCccCc
Confidence 456677788877 48999 6789999987 46667789999998999999999999865433
No 100
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.02 E-value=3.2e-09 Score=105.91 Aligned_cols=58 Identities=21% Similarity=0.234 Sum_probs=49.6
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
...+.+.+.+.++++|++|++++.|++|.. +++.+.+|++.+|+++.||.||+|+|..
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~v~l~dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEG-DGTKVTGVRMQDGSVIPADIVIVGIGIV 250 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEE-SSSBEEEEEESSSCEEECSEEEECSCCE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECCCCc
Confidence 345667788888899999999999999987 4566768999999999999999999964
No 101
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.01 E-value=5.1e-09 Score=108.28 Aligned_cols=59 Identities=15% Similarity=0.213 Sum_probs=51.0
Q ss_pred CccchHHHHHHHHHc-CcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
...+.+.|.+.+++. |++++++ +|++|..++++.++.|++.+|++++||.||.|+|.+.
T Consensus 193 ~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 193 AHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 356788899999888 9999999 9999997666777788898998899999999999865
No 102
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.01 E-value=5.5e-09 Score=107.52 Aligned_cols=59 Identities=19% Similarity=0.308 Sum_probs=49.5
Q ss_pred CccchHHHHHHHHH-cCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
...+...|.+.+++ .|++++++ .|++|..++++.++.|++.+|++++||.||.|+|.+.
T Consensus 174 r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 174 AAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 35677788888888 89999999 5999988656776678888877899999999999864
No 103
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.00 E-value=1.2e-09 Score=112.39 Aligned_cols=59 Identities=8% Similarity=0.046 Sum_probs=47.6
Q ss_pred cchHHHHHHHHH-cCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHhh
Q 009678 273 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKL 333 (529)
Q Consensus 273 ~l~~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~~ 333 (529)
.+...|.+.+++ .|++| +++.|++|.. +++.+.+|.+.+|.++.||.||+|||.+....
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~ 184 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGK 184 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCSTTTCCE
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCCCccCc
Confidence 456677788877 58999 6789999987 45667789999998899999999999875433
No 104
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.99 E-value=1.6e-09 Score=109.64 Aligned_cols=56 Identities=23% Similarity=0.208 Sum_probs=44.3
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEE--cCCcEEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~--~~G~~i~ad~VI~a~~~~~ 330 (529)
..+...|.+.+++.|++|+++++| +|..+ ++.+.+|.. .+| ++.||.||+|||.+.
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~~g-~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVK-DGKVTGFVTEKRGL-VEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEE-TTEEEEEEETTTEE-ECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEe-CCEEEEEEEEeCCC-eEEeeeEEECCCCCc
Confidence 467788888887789999999999 99874 556656654 344 688999999999864
No 105
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.99 E-value=2.8e-09 Score=97.16 Aligned_cols=56 Identities=13% Similarity=0.055 Sum_probs=44.5
Q ss_pred cchHHHHHHHHHc-CcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 273 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 273 ~l~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
.+...|.+.+++. |++++ +++|++|..+ ++.+.+|.+.+|++++||.||+|+|.+.
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 4445677778886 89998 6799999874 4556678888898899999999999853
No 106
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.99 E-value=9.4e-10 Score=107.69 Aligned_cols=41 Identities=22% Similarity=0.283 Sum_probs=37.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCcee
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~ 96 (529)
..+||+|||||++|+++|+.|+++|++|+|+|+.+.+||.+
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 53 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQL 53 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcc
Confidence 46899999999999999999999999999999998888754
No 107
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.98 E-value=2.2e-09 Score=112.72 Aligned_cols=59 Identities=15% Similarity=0.110 Sum_probs=46.5
Q ss_pred ccchHHHHHHHHHc-Cc-EEEecceeeEEEecCC--CCEEEEEE---cCCc--EEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSL-GG-EVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~-G~-~i~~~t~V~~I~~~~~--~~~~~v~~---~~G~--~i~ad~VI~a~~~~~ 330 (529)
..+...|.+.+++. |+ +|++++.|++|..+++ +++.+|.. .+|+ .+.|+.||+|||.+.
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 45677788888887 99 9999999999997543 27777764 4665 589999999998764
No 108
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.98 E-value=1.2e-09 Score=112.31 Aligned_cols=41 Identities=37% Similarity=0.550 Sum_probs=38.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCcee
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~ 96 (529)
..+||+|||||++|+++|+.|++.|++|+|+|+++.+||..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw 48 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTW 48 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 46799999999999999999999999999999999999864
No 109
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.97 E-value=3.3e-09 Score=100.20 Aligned_cols=41 Identities=34% Similarity=0.430 Sum_probs=37.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC--CCCeEEEeccccCCcee
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLGGKI 96 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~--g~~V~llEa~~~~GG~~ 96 (529)
..+||+|||||++||+||+.|++. |++|+|+|++..+||.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 456999999999999999999998 99999999999888743
No 110
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.97 E-value=8e-10 Score=109.90 Aligned_cols=58 Identities=17% Similarity=0.228 Sum_probs=49.5
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
...+.+.+.+.++++|++|+++++|++|..+ ++.+.+|++.+|+++.||.||+|+|..
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~dG~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSDGNTLPCDLVVVGVGVI 240 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSEEEECCCEE
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECcCCc
Confidence 3456777888889999999999999999874 556667999999999999999999974
No 111
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.96 E-value=2.4e-09 Score=103.67 Aligned_cols=41 Identities=27% Similarity=0.407 Sum_probs=37.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCcee
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~ 96 (529)
..+||+|||||++|+++|+.|+++|++|+|+|+++.+||.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 44 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQL 44 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 35799999999999999999999999999999998888754
No 112
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.95 E-value=5.5e-09 Score=99.57 Aligned_cols=38 Identities=26% Similarity=0.357 Sum_probs=33.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG 94 (529)
+.+||+|||||++||+||++|++.|++|+|+|+.. .||
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg 42 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRN 42 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGG
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCC
Confidence 57899999999999999999999999999999863 444
No 113
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.95 E-value=6.6e-10 Score=112.56 Aligned_cols=57 Identities=14% Similarity=0.158 Sum_probs=47.5
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEE-EcCCcEEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFL-LTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~-~~~G~~i~ad~VI~a~~~~~ 330 (529)
..+.+.+.+.+++.|++|+++++|++|..++++.+ .|+ +.+|+ +.+|.||+|+|...
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRR-VATTMKHGE-IVADQVMLALGRMP 268 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCE-EEEESSSCE-EEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEE-EEEEcCCCe-EEeCEEEEeeCccc
Confidence 45677888889999999999999999998545543 688 88896 99999999998754
No 114
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.94 E-value=3.6e-09 Score=105.47 Aligned_cols=37 Identities=43% Similarity=0.641 Sum_probs=34.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCC-eEEEeccccCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARDVLG 93 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~-V~llEa~~~~G 93 (529)
.+||+|||||++||++|..|++.|.+ |+|+|++..++
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR 41 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc
Confidence 57999999999999999999999999 99999987654
No 115
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.94 E-value=1.1e-09 Score=105.73 Aligned_cols=40 Identities=30% Similarity=0.401 Sum_probs=37.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCcee
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~ 96 (529)
.+||+|||||++||+||+.|++.|++|+|+|+++.+||..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~ 46 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL 46 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 4799999999999999999999999999999999988865
No 116
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.94 E-value=2.3e-09 Score=105.27 Aligned_cols=54 Identities=15% Similarity=-0.035 Sum_probs=42.0
Q ss_pred chHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 274 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 274 l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
+...+.+.+++.|++++++++|++|..+++++ .|++.+| ++.+|+||+|+|.+.
T Consensus 90 ~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~--~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 90 YAEYLQVVANHYELNIFENTVVTNISADDAYY--TIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSSSE--EEEESSC-CEEEEEEEECCCSTT
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEECCCeE--EEEeCCC-EEEeCEEEECCCCCC
Confidence 33445566677899999999999999754443 4777777 699999999999864
No 117
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.91 E-value=4.8e-09 Score=100.82 Aligned_cols=39 Identities=31% Similarity=0.462 Sum_probs=35.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCcee
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~ 96 (529)
.++||+|||||++||+||+.|+++|++|+|+|++ .||.+
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~ 52 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQL 52 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGG
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCee
Confidence 3579999999999999999999999999999997 77754
No 118
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.90 E-value=6.4e-09 Score=108.82 Aligned_cols=60 Identities=12% Similarity=0.130 Sum_probs=47.5
Q ss_pred CccchHHHHHHHHHc--CcEEEecceeeEEEecCC--CCEEEEEE---cCCc--EEecCEEEEccCHHH
Q 009678 271 PERLCLPIVEHIQSL--GGEVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~--G~~i~~~t~V~~I~~~~~--~~~~~v~~---~~G~--~i~ad~VI~a~~~~~ 330 (529)
...+...|.+.+++. |++|+.++.|++|..+++ +++.+|.. .+|+ .+.|+.||+|||...
T Consensus 165 G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 165 GESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp ETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 356778888888887 999999999999988544 37877754 3454 589999999998753
No 119
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.90 E-value=1.4e-09 Score=110.74 Aligned_cols=58 Identities=24% Similarity=0.284 Sum_probs=47.9
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
..+.+.+.+.++++|++|+++++|++|..++++.+ .|++.+|+++.+|.||+|+|...
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-~v~~~~G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNADGTR-HVVFESGAEADYDVVMLAIGRVP 288 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEE-EEEECCCcEEEcCEEEEccCCCc
Confidence 35677788889999999999999999987544433 68888898899999999998753
No 120
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.89 E-value=2.8e-10 Score=98.71 Aligned_cols=101 Identities=20% Similarity=0.139 Sum_probs=73.9
Q ss_pred cccCCCChHHHHHHHHHHHHHhCCCCccccccccEE--EEEEEeccCC--ccccc-CCCCC-CCCCCCCCCCCCeEEecc
Q 009678 410 EEWISCSDSEIIDATMKELAKLFPDEISADQSKAKI--VKYHVVKTPR--SVYKT-IPNCE-PCRPLQRSPVEGFYLAGD 483 (529)
Q Consensus 410 ~~~~~~~~~~~~~~~l~~l~~~~p~~~~~~~~~~~~--~~~~~~~~p~--~~~~~-~~~~~-~~~~~~~~~~~~l~~aG~ 483 (529)
..|..++++++++.++++|.++|+... . ..... ..++|...|+ |.|.+ .|+.. .+.+.+..|.++|||||+
T Consensus 49 ~~~~~l~~~e~~~~~l~~L~~~~g~~~-~--~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~p~grl~FAGe 125 (181)
T 2e1m_C 49 ARWDSFDDAERYGYALENLQSVHGRRI-E--VFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVRPEGPVYFAGE 125 (181)
T ss_dssp HHHTTSCTTTTHHHHHHHHHHHHCGGG-G--GTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHSCBTTEEECSG
T ss_pred HHHHcCCHHHHHHHHHHHHHHHhCCCc-H--hhccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhCCCCcEEEEEH
Confidence 567788999999999999999995433 1 11233 5566766666 44443 34421 223445667899999999
Q ss_pred cccCCCCCchHHHHHHHHHHHHHHHHHHhhH
Q 009678 484 YTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 514 (529)
Q Consensus 484 ~~~~~~~~~~~gA~~Sg~~aA~~i~~~l~~~ 514 (529)
+++. |.++|+||+.||+++|++|+..++..
T Consensus 126 ~ts~-~~g~~eGAl~SG~raA~~i~~~l~~~ 155 (181)
T 2e1m_C 126 HVSL-KHAWIEGAVETAVRAAIAVNEAPVGD 155 (181)
T ss_dssp GGTT-STTSHHHHHHHHHHHHHHHHTCCC--
T ss_pred HHcC-CccCHHHHHHHHHHHHHHHHHHhccC
Confidence 9996 88999999999999999999888653
No 121
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.88 E-value=4.6e-09 Score=108.01 Aligned_cols=57 Identities=14% Similarity=0.188 Sum_probs=45.2
Q ss_pred cchHHHHHHHHHc-CcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHH
Q 009678 273 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 331 (529)
Q Consensus 273 ~l~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~ 331 (529)
.+...|.+.+++. |++|+ +..|+.|..+ ++.+.+|.+.+|+++.||.||+|||.+..
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d-~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSAN-SGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEec-CCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 4556677777774 89985 5689999874 55676788999989999999999998643
No 122
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.88 E-value=6.4e-09 Score=99.56 Aligned_cols=42 Identities=38% Similarity=0.612 Sum_probs=37.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEE-EeccccCCceeEe
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLL-LEARDVLGGKIAA 98 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~l-lEa~~~~GG~~~~ 98 (529)
.++||+|||||++||+||+.|+++|++|+| +|+ +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 467999999999999999999999999999 999 778887643
No 123
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.88 E-value=2.1e-09 Score=106.71 Aligned_cols=39 Identities=28% Similarity=0.344 Sum_probs=35.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG 94 (529)
..+||+|||||++||++|+.|++.|++|+|+|++...+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 63 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREA 63 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccc
Confidence 467999999999999999999999999999999876654
No 124
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.87 E-value=9.2e-10 Score=109.61 Aligned_cols=56 Identities=14% Similarity=0.233 Sum_probs=46.6
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
..+.+.+.+.++++|++|++++.|++|..+ + .+..|++.+|+++.||.||+|+|..
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~-~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGE-G-QLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECS-S-SCCEEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEecc-C-cEEEEEECCCCEEEcCEEEEeeCCe
Confidence 345667788888999999999999999863 3 4447889999999999999999874
No 125
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.85 E-value=1.6e-08 Score=88.15 Aligned_cols=51 Identities=20% Similarity=0.215 Sum_probs=41.2
Q ss_pred hHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 275 CLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 275 ~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
.+.+.+.+++.|++++++ +|++|+.++++ + .|++.+| ++.+|.||+|+|..
T Consensus 59 ~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~-~-~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 59 LRRLEAHARRYGAEVRPG-VVKGVRDMGGV-F-EVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHHHHTTCEEEEC-CCCEEEECSSS-E-EEECSSC-EEEEEEEEECCTTC
T ss_pred HHHHHHHHHHcCCEEEeC-EEEEEEEcCCE-E-EEEECCC-EEEECEEEECCCCC
Confidence 344666778889999999 99999975444 2 5788888 89999999999964
No 126
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.84 E-value=3e-09 Score=107.33 Aligned_cols=56 Identities=13% Similarity=0.144 Sum_probs=46.2
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
..+.+.+.+.+++.|++|+++++|++|+.. ++.+ .|++.+| ++.||.||+|+|...
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEET-ANGI-VLETSEQ-EISCDSGIFALNLHP 244 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEEC-SSCE-EEEESSC-EEEESEEEECSCCBC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEcc-CCeE-EEEECCC-EEEeCEEEECcCCCC
Confidence 456677888889999999999999999864 4445 6888777 899999999998743
No 127
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.83 E-value=5e-07 Score=95.18 Aligned_cols=61 Identities=26% Similarity=0.325 Sum_probs=45.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHH-----CCCCeEEEeccccCCceeEeeccCCCCeeeeeeeeecCCcchHHHHHHHcCC
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLAD-----AGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGI 130 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~-----~g~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~ 130 (529)
.++||+|||||++||++|..|++ .|.+|+|+|++....... .+ . +......++++++|+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~g------ra-------~---~l~~~tle~l~~lGl 70 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNG------QA-------D---GLQCRTLESLKNLGL 70 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSC------SC-------C---EECHHHHHHHHTTTC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCC------ce-------e---EEChHHHHHHHHCCC
Confidence 35799999999999999999999 999999999975432100 00 0 113456788888887
Q ss_pred CC
Q 009678 131 ND 132 (529)
Q Consensus 131 ~~ 132 (529)
..
T Consensus 71 ~~ 72 (665)
T 1pn0_A 71 AD 72 (665)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 128
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.82 E-value=6.5e-09 Score=105.40 Aligned_cols=38 Identities=16% Similarity=0.180 Sum_probs=35.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC-----CCeEEEeccccCC
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAG-----HKPLLLEARDVLG 93 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g-----~~V~llEa~~~~G 93 (529)
..+||+|||||++||++|..|++.| .+|+|||+++.+|
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g 71 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR 71 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC
Confidence 4579999999999999999999999 9999999998877
No 129
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.82 E-value=2e-08 Score=103.81 Aligned_cols=61 Identities=25% Similarity=0.255 Sum_probs=46.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccCCCCeeeeeeeeecCCcchHHHHHHHcCCCC
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIND 132 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~ 132 (529)
.++||+|||||++||++|..|++.|.+|+|+|++...+...+. . .......++++++|+..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~------~----------~l~~~~~~~l~~lGl~~ 85 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRV------G----------TIGPRSMELFRRWGVAK 85 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCC------C----------EECHHHHHHHHHTTCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCce------e----------eeCHHHHHHHHHcCChH
Confidence 3579999999999999999999999999999998765432211 0 11244567788888643
No 130
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.81 E-value=4e-08 Score=99.72 Aligned_cols=56 Identities=20% Similarity=0.304 Sum_probs=46.6
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
..+.+.+.+.+++.|++|+++++|++|+.+ ++.+ .|++.+|+++.+|.||+|+|..
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEGE-NGKV-ARVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBE-EEEEESSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEcc-CCeE-EEEEeCCCEEEcCEEEECCCCC
Confidence 456677888889999999999999999873 4554 3777888899999999999864
No 131
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.81 E-value=2e-08 Score=101.11 Aligned_cols=56 Identities=20% Similarity=0.319 Sum_probs=46.6
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
.+.+.+.+.+++.|++++++++|++|+.++++.+ .|++.+|+++.+|.||+|+|..
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSL-TLELEDGRSETVDCLIWAIGRE 264 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEE-EEEECCCcEEEcCEEEECCCCC
Confidence 4567788888899999999999999987544433 5788899889999999999864
No 132
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.80 E-value=2.8e-08 Score=101.45 Aligned_cols=58 Identities=12% Similarity=0.136 Sum_probs=47.3
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcE-EecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNV-IDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~-i~ad~VI~a~~~~~ 330 (529)
..+.+.+.+.++++|+++++++.|++|..++++.+ .|++.+|++ +.+|.||+|+|...
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNL-SIHLSDGRIYEHFDHVIYCVGRSP 275 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCE-EEEETTSCEEEEESEEEECCCBCC
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceE-EEEECCCcEEEECCEEEECCCCCc
Confidence 35667788889999999999999999987544433 577888987 99999999998643
No 133
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.79 E-value=5.9e-08 Score=101.32 Aligned_cols=53 Identities=25% Similarity=0.335 Sum_probs=44.3
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 328 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~ 328 (529)
..+.+.+.+.+++.|++|+++++|++|+.+ ++ .|++.+|+++.+|.||+|+|.
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~---~v~~~~g~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEEN-GA---VVRLKSGSVIQTDMLILAIGV 280 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGG-GT---EEEETTSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecC-CC---EEEECCCCEEEcCEEEEccCC
Confidence 456677888889999999999999999863 22 367788989999999999986
No 134
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.79 E-value=4.3e-09 Score=107.30 Aligned_cols=57 Identities=25% Similarity=0.359 Sum_probs=47.2
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
..+.+.+.+.++++|++|++++.|++|..++++. ..|++.+|+++.+|.||+|+|..
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCce-EEEEECCCcEEEcCEEEECCCCc
Confidence 3556778888999999999999999998754443 36888899889999999999864
No 135
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.79 E-value=3e-08 Score=101.02 Aligned_cols=50 Identities=20% Similarity=0.278 Sum_probs=41.4
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
+.+.++++|++|++++.|++|..+ +.+..|.+.+|+++.+|.||+|+|..
T Consensus 263 le~~l~~~GV~v~~~~~v~~i~~~--~~v~~v~~~~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 263 VIQELERWGIDYVHIPNVKRVEGN--EKVERVIDMNNHEYKVDALIFADGRR 312 (493)
T ss_dssp HHHHHHHHTCEEEECSSEEEEECS--SSCCEEEETTCCEEECSEEEECCCEE
T ss_pred HHHHHHhCCcEEEeCCeeEEEecC--CceEEEEeCCCeEEEeCEEEECCCcC
Confidence 447788899999999999999853 33446778889899999999999875
No 136
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.78 E-value=1.9e-08 Score=101.40 Aligned_cols=42 Identities=38% Similarity=0.427 Sum_probs=38.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--CeEEEeccccCCceeE
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDVLGGKIA 97 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~~~~GG~~~ 97 (529)
..+||+|||||++||++|..|++.|. +|+|+|+++.+||...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~ 48 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWN 48 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeec
Confidence 46799999999999999999999999 9999999999988653
No 137
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.78 E-value=7e-09 Score=105.41 Aligned_cols=58 Identities=19% Similarity=0.216 Sum_probs=46.8
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCC-cEEecCEEEEccCHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-NVIDGDAYVFATPVD 329 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G-~~i~ad~VI~a~~~~ 329 (529)
..+.+.+.+.+++.|++|+++++|++|+.++++.+..|++.+| +++.+|.||+|+|..
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 284 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRK 284 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCC
Confidence 3566778888889999999999999998754553346888888 789999999999863
No 138
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.78 E-value=2e-08 Score=101.43 Aligned_cols=57 Identities=18% Similarity=0.214 Sum_probs=46.5
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
..+.+.+.+.++++|++++++++|++|+.++++ + .+++.+|+++.+|.||+|+|...
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~-v-~v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKG-A-RVELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE-E-EEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE-E-EEEECCCeEEEcCEEEECcCCCc
Confidence 456677888888999999999999999874333 3 57777888899999999999754
No 139
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.78 E-value=2.3e-08 Score=96.23 Aligned_cols=40 Identities=43% Similarity=0.622 Sum_probs=36.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCcee
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~ 96 (529)
..+||+|||||++|+++|..|++.|++|+|+|++ .+||.+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 46 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQI 46 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccc
Confidence 4579999999999999999999999999999998 677754
No 140
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.77 E-value=6.3e-09 Score=106.40 Aligned_cols=59 Identities=17% Similarity=0.215 Sum_probs=48.0
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHHHh
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILK 332 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~~~ 332 (529)
..+.+.+.+.++++|++|+++++|++|..++++ + .|++.+|+++.+|.||+|+|.....
T Consensus 223 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~-v-~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 223 ADAALVLEESFAERGVRLFKNARAASVTRTGAG-V-LVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECSSS-E-EEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCE-E-EEEECCCcEEEcCEEEECCCCCcCC
Confidence 356678888899999999999999999974333 4 5777888889999999999976433
No 141
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.76 E-value=7.1e-09 Score=105.44 Aligned_cols=58 Identities=17% Similarity=0.131 Sum_probs=45.1
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcC---C----cEEecCEEEEccCHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---G----NVIDGDAYVFATPVD 329 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~---G----~~i~ad~VI~a~~~~ 329 (529)
..+.+.+.+.+++.|++|++++.|++|+.++++..+.|++.+ | +++.+|.||+|+|..
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~ 292 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV 292 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccc
Confidence 456667888889999999999999999975555223566654 2 578999999999864
No 142
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.76 E-value=1.2e-08 Score=97.60 Aligned_cols=38 Identities=37% Similarity=0.643 Sum_probs=34.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC-CeEEEeccccCCcee
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKI 96 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~~~GG~~ 96 (529)
+||+|||||++|+++|+.|++.|+ +|+|+|+. .+||.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~ 40 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQI 40 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccc
Confidence 699999999999999999999999 99999994 566654
No 143
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.76 E-value=4.5e-08 Score=99.86 Aligned_cols=42 Identities=26% Similarity=0.412 Sum_probs=38.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeE
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~ 97 (529)
.++||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~ 65 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCL 65 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 468999999999999999999999999999999999999764
No 144
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.76 E-value=3.6e-08 Score=99.63 Aligned_cols=55 Identities=20% Similarity=0.318 Sum_probs=45.9
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCc-EEecCEEEEccCHH
Q 009678 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYVFATPVD 329 (529)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~-~i~ad~VI~a~~~~ 329 (529)
.+.+.+.+.+++.|++++++++|++|..++++ ..|++.+|+ ++.+|.||+|+|..
T Consensus 208 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 208 LLSATLAENMHAQGIETHLEFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCC
Confidence 45667788888999999999999999874444 368888998 89999999999864
No 145
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.75 E-value=2e-08 Score=95.99 Aligned_cols=52 Identities=15% Similarity=0.209 Sum_probs=39.5
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCC-CCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 278 IVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~-~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
+.+.+++.|++++++++|++|..+.+ +....|++.+|+++.+|+||+|+|..
T Consensus 62 ~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 62 LKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 34445667899999999999976422 22235788888889999999999975
No 146
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.73 E-value=5.4e-08 Score=98.91 Aligned_cols=41 Identities=32% Similarity=0.399 Sum_probs=37.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCcee
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~ 96 (529)
.++||+|||||++|++||+.|++.|++|+|+|++..+||..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 57899999999999999999999999999999998777754
No 147
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.73 E-value=4.3e-08 Score=92.90 Aligned_cols=34 Identities=38% Similarity=0.535 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
++||+|||||++||++|..|+++|++|+|+|++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4799999999999999999999999999999864
No 148
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.71 E-value=3.6e-08 Score=94.63 Aligned_cols=56 Identities=11% Similarity=0.104 Sum_probs=43.0
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcC----C--cEEecCEEEEccCHH
Q 009678 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----G--NVIDGDAYVFATPVD 329 (529)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~----G--~~i~ad~VI~a~~~~ 329 (529)
.+.+.+.+.+++.|++++++++|++|..+ ++.+.+|++.+ | +++.+|.||+|+|..
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 35566777788899999999999999874 44555566554 4 479999999999853
No 149
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.71 E-value=5.2e-08 Score=98.40 Aligned_cols=41 Identities=22% Similarity=0.421 Sum_probs=37.9
Q ss_pred CeEEEECCChHHHHHHHHHHH---CCCC---eEEEeccccCCceeEe
Q 009678 58 LKVVIAGAGLAGLSTAKYLAD---AGHK---PLLLEARDVLGGKIAA 98 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~---~g~~---V~llEa~~~~GG~~~~ 98 (529)
+||+|||||++||+||..|++ .|++ |+|+|+++.+||.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 699999999999999999999 9999 9999999999997643
No 150
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.70 E-value=8.8e-08 Score=97.48 Aligned_cols=57 Identities=14% Similarity=0.098 Sum_probs=45.0
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCc-----EEecCEEEEccCHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-----VIDGDAYVFATPVD 329 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~-----~i~ad~VI~a~~~~ 329 (529)
..+.+.+.+.+++.|++|++++.|++|+.++++.+ .|++.+++ ++.+|.||+|+|..
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECcccc
Confidence 45667788888999999999999999997555544 46665553 78999999999864
No 151
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.70 E-value=2.1e-08 Score=100.35 Aligned_cols=58 Identities=16% Similarity=0.195 Sum_probs=47.6
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEec-CCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELN-DDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~-~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
..+.+.+.+.+++.|+++++++.|++|... +++.+..|++.+|+++.+|.||+|+|..
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 345667788888999999999999999862 2455657888899899999999999864
No 152
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.70 E-value=6.1e-08 Score=93.57 Aligned_cols=49 Identities=14% Similarity=0.272 Sum_probs=37.5
Q ss_pred HHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 277 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 277 ~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
.+.+.+.+.|+++++++ |++|..++++ + .|++ +|+++++|.||+|+|.+
T Consensus 75 ~l~~~~~~~gv~~~~~~-v~~i~~~~~~-~-~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 75 KFRKQSERFGTTIFTET-VTKVDFSSKP-F-KLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHTTCEEECCC-CCEEECSSSS-E-EEEC-SSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHCCCEEEEeE-EEEEEEcCCE-E-EEEE-CCcEEEcCEEEECCCCC
Confidence 34555667789999987 9999874333 2 4666 77789999999999985
No 153
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.69 E-value=8e-08 Score=97.50 Aligned_cols=43 Identities=37% Similarity=0.465 Sum_probs=39.2
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeE
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~ 97 (529)
+.++||+|||||++|+++|..|++.|++|+|+|+++.+||.+.
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCL 46 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccccc
Confidence 3578999999999999999999999999999999988888663
No 154
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.69 E-value=5.4e-08 Score=95.64 Aligned_cols=44 Identities=16% Similarity=0.135 Sum_probs=36.5
Q ss_pred HHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCH
Q 009678 281 HIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 328 (529)
Q Consensus 281 ~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~ 328 (529)
.+++.|++++++++|++|..+ + + .|++.+|+++.+|+||+|||.
T Consensus 71 ~~~~~~i~~~~~~~V~~id~~-~-~--~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 71 WYEKNNIKVITSEFATSIDPN-N-K--LVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp HHHHTTCEEECSCCEEEEETT-T-T--EEEETTSCEEECSEEEECCCE
T ss_pred HHHHCCCEEEeCCEEEEEECC-C-C--EEEECCCCEEECCEEEEecCC
Confidence 345668999999999999863 3 3 377889989999999999996
No 155
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.69 E-value=4.8e-08 Score=100.18 Aligned_cols=52 Identities=15% Similarity=0.248 Sum_probs=40.0
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCC-CCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 278 IVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~-~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
+.+.+.+.|++++++++|++|..+.+ +....|++.+|+++.+|+||+|+|..
T Consensus 273 l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 273 LKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 44555677899999999999975321 22236888889889999999999974
No 156
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.69 E-value=6.8e-08 Score=93.36 Aligned_cols=40 Identities=35% Similarity=0.574 Sum_probs=34.9
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCce
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGK 95 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~ 95 (529)
...+||+|||||++|+++|+.|++.|++|+|+|+. .+||.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~ 51 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGA 51 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCc
Confidence 35689999999999999999999999999999974 55553
No 157
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.69 E-value=9.4e-08 Score=95.10 Aligned_cols=52 Identities=17% Similarity=0.251 Sum_probs=43.3
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
..+...+.+.+++.|++++++++|++|+. + +|++.+|+++.+|.||+|+|..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~----~v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--H----EIVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--S----EEEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--C----eEEECCCCEEeeeEEEECCCCC
Confidence 35667788888899999999999999963 2 2677889899999999999853
No 158
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.68 E-value=1.6e-07 Score=97.71 Aligned_cols=56 Identities=20% Similarity=0.386 Sum_probs=45.1
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEec------------------CCCCEEEEEEcCCcEEecCEEEEccCH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELN------------------DDGTVKNFLLTNGNVIDGDAYVFATPV 328 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~------------------~~~~~~~v~~~~G~~i~ad~VI~a~~~ 328 (529)
..+...+.+.+++.|+++++++.|++|..+ +++.+ .+++.+|+++.||.||+|+|.
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~g~~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHL-SLTLSNGELLETDLLIMAIGV 265 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEE-EEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcE-EEEEcCCCEEEcCEEEECcCC
Confidence 355667778888999999999999999863 23433 467788889999999999986
No 159
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.66 E-value=5.7e-08 Score=98.76 Aligned_cols=41 Identities=37% Similarity=0.456 Sum_probs=38.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeE
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~ 97 (529)
++||+|||||++|+++|..|++.|++|+|+|+++.+||.+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 45 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCL 45 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccc
Confidence 57999999999999999999999999999999888888653
No 160
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.66 E-value=7.6e-08 Score=99.07 Aligned_cols=36 Identities=33% Similarity=0.587 Sum_probs=33.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHC-CCCeEEEeccc
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARD 90 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~-g~~V~llEa~~ 90 (529)
+.++|+||||||.+|+.+|.+|++. +.+|+||||..
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 4679999999999999999999975 79999999976
No 161
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.64 E-value=1.2e-07 Score=95.96 Aligned_cols=41 Identities=34% Similarity=0.520 Sum_probs=38.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeE
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~ 97 (529)
++||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 57999999999999999999999999999999988998764
No 162
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.63 E-value=1.3e-07 Score=95.64 Aligned_cols=41 Identities=37% Similarity=0.451 Sum_probs=38.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeE
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~ 97 (529)
++||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCL 44 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccc
Confidence 57999999999999999999999999999999999998764
No 163
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.62 E-value=1.8e-07 Score=95.44 Aligned_cols=62 Identities=13% Similarity=0.036 Sum_probs=46.1
Q ss_pred cchHHHHHHHHHcC-cEEEecceeeEEEecCCC-CEEEEEEc--CC-----cEEecCEEEEccCHHHHhhh
Q 009678 273 RLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYVFATPVDILKLQ 334 (529)
Q Consensus 273 ~l~~~l~~~l~~~G-~~i~~~t~V~~I~~~~~~-~~~~v~~~--~G-----~~i~ad~VI~a~~~~~~~~l 334 (529)
.....+.+.+.++| ++|++++.|++|..++++ ++++|++. +| .+++|+.||+|+|+....+|
T Consensus 222 s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~l 292 (504)
T 1n4w_A 222 SLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTEL 292 (504)
T ss_dssp CTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHH
Confidence 33455566666675 999999999999986434 67888874 56 36889999999998654443
No 164
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.62 E-value=1.5e-07 Score=96.20 Aligned_cols=56 Identities=11% Similarity=0.071 Sum_probs=46.7
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
..+.+.+.+.+++.|+++++++.|+++...++ .+ .|.+.+++++.+|.|++|+|-.
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~-~~-~v~~~~~~~~~~D~vLvAvGR~ 318 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDD-KI-LVEFSDKTSELYDTVLYAIGRK 318 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEETT-EE-EEEETTSCEEEESEEEECSCEE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEecCC-eE-EEEEcCCCeEEEEEEEEccccc
Confidence 45677888899999999999999999997543 33 5778888889999999999864
No 165
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.62 E-value=1.7e-07 Score=94.56 Aligned_cols=57 Identities=18% Similarity=0.221 Sum_probs=45.4
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
..+.+.+.+.+++.|++|+++++|++|..+ ++.+..+.+ +|+++.+|.||+|+|...
T Consensus 191 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~~v~~-~g~~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 191 KEFTDILAKDYEAHGVNLVLGSKVAAFEEV-DDEIITKTL-DGKEIKSDIAILCIGFRP 247 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEESSCEEEEEEE-TTEEEEEET-TSCEEEESEEEECCCEEE
T ss_pred hhHHHHHHHHHHHCCCEEEcCCeeEEEEcC-CCeEEEEEe-CCCEEECCEEEECcCCCC
Confidence 456677888889999999999999999863 455544555 777899999999998643
No 166
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.61 E-value=1.6e-07 Score=95.40 Aligned_cols=42 Identities=36% Similarity=0.452 Sum_probs=38.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeE
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~ 97 (529)
.++||+|||||++|+++|..|++.|++|+|+|+++.+||.+.
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 46 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCL 46 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcee
Confidence 357999999999999999999999999999999888888653
No 167
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.60 E-value=2.1e-07 Score=94.47 Aligned_cols=42 Identities=29% Similarity=0.430 Sum_probs=38.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeE
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~ 97 (529)
.++||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCL 46 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCccc
Confidence 468999999999999999999999999999999988999763
No 168
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.58 E-value=4.9e-07 Score=92.66 Aligned_cols=35 Identities=31% Similarity=0.464 Sum_probs=32.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
.++||+|||||++|++||..|++.|++|+|+|+.+
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 56899999999999999999999999999999964
No 169
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.58 E-value=2.1e-07 Score=93.96 Aligned_cols=39 Identities=31% Similarity=0.434 Sum_probs=36.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCcee
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~ 96 (529)
++||+|||||++|++||..|++.|++|+|+|+. .+||.+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~ 41 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVC 41 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcC
Confidence 579999999999999999999999999999997 778865
No 170
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.57 E-value=4.5e-07 Score=92.29 Aligned_cols=42 Identities=29% Similarity=0.450 Sum_probs=36.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCCeEEEec--------cccCCcee
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEA--------RDVLGGKI 96 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa--------~~~~GG~~ 96 (529)
+.++||+|||||++|++||..|++.|++|+|+|+ ...+||.+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc 53 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTC 53 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCee
Confidence 3568999999999999999999999999999998 44566655
No 171
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.53 E-value=4.8e-07 Score=92.32 Aligned_cols=62 Identities=16% Similarity=0.101 Sum_probs=45.5
Q ss_pred cchHHHHHHHHHcC-cEEEecceeeEEEecCCC-CEEEEEEc--CC-----cEEecCEEEEccCHHHHhhh
Q 009678 273 RLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYVFATPVDILKLQ 334 (529)
Q Consensus 273 ~l~~~l~~~l~~~G-~~i~~~t~V~~I~~~~~~-~~~~v~~~--~G-----~~i~ad~VI~a~~~~~~~~l 334 (529)
.....+...++++| ++|++++.|++|..++++ ++++|++. +| .+++|+.||+|+|+....+|
T Consensus 227 s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~l 297 (507)
T 1coy_A 227 SLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKL 297 (507)
T ss_dssp CTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHH
T ss_pred ChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHH
Confidence 33455566666665 999999999999986544 67788774 55 26889999999998744443
No 172
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.53 E-value=1.9e-07 Score=95.00 Aligned_cols=56 Identities=25% Similarity=0.317 Sum_probs=46.4
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
..+...+.+.++++|+++++++.|++|..+ ++.+ .|++.+|+++.||.||+|+|..
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGKL-LIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCeE-EEEECCCCEEECCEEEECCCCC
Confidence 446677788888999999999999999863 3433 6888899899999999999864
No 173
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.53 E-value=3.7e-08 Score=94.76 Aligned_cols=42 Identities=33% Similarity=0.396 Sum_probs=38.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHH--CCCCeEEEeccccCCceeE
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLAD--AGHKPLLLEARDVLGGKIA 97 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~--~g~~V~llEa~~~~GG~~~ 97 (529)
.++||+|||||++||+||++|++ .|++|+|+|+++.+||.+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEE
Confidence 56799999999999999999986 4999999999999999763
No 174
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.52 E-value=3.5e-07 Score=92.57 Aligned_cols=39 Identities=31% Similarity=0.437 Sum_probs=35.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCcee
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~ 96 (529)
++||+|||||++|+++|..|++.|++|+|+|++ ..||.+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~ 41 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVC 41 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcc
Confidence 479999999999999999999999999999997 677765
No 175
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.51 E-value=1.6e-07 Score=96.53 Aligned_cols=36 Identities=33% Similarity=0.335 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHHH-CCCCeEEEeccccC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDVL 92 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~-~g~~V~llEa~~~~ 92 (529)
++|+||||||.+|+.+|.+|++ .+.+|+||||....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999998 58999999998654
No 176
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.50 E-value=2.3e-07 Score=92.91 Aligned_cols=39 Identities=31% Similarity=0.448 Sum_probs=34.9
Q ss_pred CCeEEEECCChHHHHHHHHHHH--CCCCeEEEeccccCCce
Q 009678 57 PLKVVIAGAGLAGLSTAKYLAD--AGHKPLLLEARDVLGGK 95 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~--~g~~V~llEa~~~~GG~ 95 (529)
++||+|||||++|+++|+.|++ .|++|+|+|+++..++.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~ 42 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT 42 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC
Confidence 3699999999999999999999 78999999999876553
No 177
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.49 E-value=8.6e-07 Score=88.73 Aligned_cols=53 Identities=17% Similarity=0.245 Sum_probs=45.2
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
...+.+.+.+.++++|+++++++.|++++. + .|++.+|+++.+|.||+|+|..
T Consensus 187 d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~--~----~v~~~~g~~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 187 DADMNQPILDELDKREIPYRLNEEINAING--N----EITFKSGKVEHYDMIIEGVGTH 239 (437)
T ss_dssp CGGGGHHHHHHHHHTTCCEEESCCEEEEET--T----EEEETTSCEEECSEEEECCCEE
T ss_pred cchhHHHHHHHhhccceEEEeccEEEEecC--C----eeeecCCeEEeeeeEEEEecee
Confidence 356788899999999999999999999863 2 3678899999999999999864
No 178
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.48 E-value=3.3e-06 Score=85.82 Aligned_cols=56 Identities=20% Similarity=0.263 Sum_probs=44.0
Q ss_pred CccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCc----EEecCEEEEccCH
Q 009678 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN----VIDGDAYVFATPV 328 (529)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~----~i~ad~VI~a~~~ 328 (529)
+..+.+.+.+.|+++|++|++++.|++|+ +++.+..+.+.+|+ +|.||.||+|+|.
T Consensus 271 ~~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred CHHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEecCcccceeeeccCEEEEccCC
Confidence 45677778888999999999999999996 34444445556663 6999999999984
No 179
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.47 E-value=1.5e-07 Score=96.96 Aligned_cols=37 Identities=32% Similarity=0.352 Sum_probs=33.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCC-CCeEEEecccc
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDV 91 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g-~~V~llEa~~~ 91 (529)
..++|+||||||.+|+.+|.+|++.+ .+|+||||...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35799999999999999999999987 79999999765
No 180
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.44 E-value=4.1e-08 Score=97.51 Aligned_cols=45 Identities=7% Similarity=0.050 Sum_probs=37.6
Q ss_pred HHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCH
Q 009678 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 328 (529)
Q Consensus 282 l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~ 328 (529)
+++.|+++++++.|..++.+.+.. .|++.+|+++.+|.||+++|.
T Consensus 212 l~~~gi~v~~~~~v~~v~~~~~~~--~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 212 TENALIEWHPGPDAAVVKTDTEAM--TVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp STTCSEEEECTTTTCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred HHhcCcEEEeCceEEEEEecccce--EEEcCCCcEEEeeEEEEecCc
Confidence 356789999999999998755554 488999999999999999874
No 181
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.44 E-value=3.6e-07 Score=94.14 Aligned_cols=36 Identities=33% Similarity=0.454 Sum_probs=32.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHH-CCCCeEEEecccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~-~g~~V~llEa~~~ 91 (529)
+++|+||||||.+|+.+|.+|++ .|++|+|||+...
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 58999999999999999999998 5789999999754
No 182
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.42 E-value=1.7e-07 Score=89.54 Aligned_cols=41 Identities=34% Similarity=0.622 Sum_probs=36.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeE
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~ 97 (529)
.+|||+|||||++|++||..|++.|++|+|+|+ +.+||.+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~~ 45 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQMA 45 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCeee
Confidence 468999999999999999999999999999998 46777653
No 183
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.39 E-value=1.4e-06 Score=88.42 Aligned_cols=37 Identities=24% Similarity=0.390 Sum_probs=32.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHC--CCCeEEEeccccCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLG 93 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~--g~~V~llEa~~~~G 93 (529)
.+||+|||||++|++||..|++. |.+|+|+|+++..+
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 74 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYS 74 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC
Confidence 47999999999999999999996 89999999976643
No 184
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.38 E-value=1.1e-06 Score=86.38 Aligned_cols=50 Identities=22% Similarity=0.327 Sum_probs=40.5
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
+.+.+++.|++|+++++|++|..++++ ..|++.+|+++.+|.||+|+|..
T Consensus 193 l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 193 VQAGLEGLGVRFHLGPVLASLKKAGEG--LEAHLSDGEVIPCDLVVSAVGLR 242 (384)
T ss_dssp HHHHHHTTTCEEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHcCCEEEeCCEEEEEEecCCE--EEEEECCCCEEECCEEEECcCCC
Confidence 455566779999999999999874332 36788899889999999999864
No 185
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.38 E-value=6.3e-07 Score=90.25 Aligned_cols=37 Identities=32% Similarity=0.392 Sum_probs=33.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHC--CCCeEEEeccccCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLG 93 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~--g~~V~llEa~~~~G 93 (529)
++||+|||||++|++||+.|++. |++|+|+|+++..+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~ 41 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVS 41 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccc
Confidence 47999999999999999999998 78999999987543
No 186
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.38 E-value=1.5e-06 Score=87.35 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=32.6
Q ss_pred CeEEEECCChHHHHHHHHHHHC--CCCeEEEeccccCC
Q 009678 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLG 93 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~--g~~V~llEa~~~~G 93 (529)
+||+|||||++|++||..|++. |.+|+|+|+++.+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 4899999999999999999997 89999999976643
No 187
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.37 E-value=1.9e-06 Score=88.67 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=34.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CCCeEEEeccccCC
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLG 93 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~-g~~V~llEa~~~~G 93 (529)
..+|++|||||.+|+++|++|++. |.+|+|||++....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~ 50 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDR 50 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCC
Confidence 468999999999999999999998 89999999986643
No 188
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.37 E-value=1.2e-06 Score=85.55 Aligned_cols=34 Identities=32% Similarity=0.429 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
..||+|||||++|++||..|++.| +|+|+|+++.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 459999999999999999999999 9999998654
No 189
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.36 E-value=7.2e-07 Score=90.85 Aligned_cols=42 Identities=24% Similarity=0.183 Sum_probs=32.5
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCce
Q 009678 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGK 95 (529)
Q Consensus 54 ~~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~ 95 (529)
.+.-+||||||+|++||++|..|.+.|...+++|+.+..|+.
T Consensus 36 ~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~ 77 (501)
T 4b63_A 36 QDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQP 77 (501)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCC
T ss_pred CCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCc
Confidence 345689999999999999999999988888888877766654
No 190
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.33 E-value=1.3e-06 Score=88.95 Aligned_cols=36 Identities=19% Similarity=0.299 Sum_probs=33.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC---CCeEEEeccccC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAG---HKPLLLEARDVL 92 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g---~~V~llEa~~~~ 92 (529)
++||+|||||++|+++|..|++.| .+|+|+|++..+
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 589999999999999999999987 999999997654
No 191
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.32 E-value=1.4e-06 Score=87.38 Aligned_cols=34 Identities=38% Similarity=0.623 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHH---CCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLAD---AGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~---~g~~V~llEa~~ 90 (529)
.+||+|||||++|++||+.|++ .|++|+|+|+++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 4799999999999999999999 799999999875
No 192
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.30 E-value=5.5e-06 Score=82.12 Aligned_cols=46 Identities=22% Similarity=0.262 Sum_probs=38.0
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
+.+.++++|++|+++++|++|. + + .|++.+|+++.+|.||+|+|..
T Consensus 193 l~~~l~~~GV~i~~~~~v~~i~-~-~----~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 193 VARYHAAQGVDLRFERSVTGSV-D-G----VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHHTTCEEEESCCEEEEE-T-T----EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHcCcEEEeCCEEEEEE-C-C----EEEECCCCEEEcCEEEECcCCC
Confidence 4455677899999999999998 2 3 4777889899999999999864
No 193
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.28 E-value=1.2e-06 Score=87.59 Aligned_cols=42 Identities=19% Similarity=0.203 Sum_probs=33.5
Q ss_pred HHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 283 QSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 283 ~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
++.|+++..+ +|++|..+ .+ .|++.+|+++.+|++|+|||+.
T Consensus 67 ~~~gv~~i~~-~v~~Id~~--~~--~V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 67 PKFNIEFINE-KAESIDPD--AN--TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp GGGTEEEECS-CEEEEETT--TT--EEEETTCCEEECSEEEECCCCE
T ss_pred HHCCcEEEEe-EEEEEECC--CC--EEEECCCCEEECCEEEEeCCCC
Confidence 4567888655 79999863 33 3788999999999999999974
No 194
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.26 E-value=6e-07 Score=95.75 Aligned_cols=44 Identities=27% Similarity=0.475 Sum_probs=40.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEe
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAA 98 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~ 98 (529)
...+||+|||||++||+||+.|+++|++|+|+|+.+.+||.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 45789999999999999999999999999999999999998754
No 195
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.25 E-value=6.3e-07 Score=85.55 Aligned_cols=36 Identities=33% Similarity=0.438 Sum_probs=32.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
..+||+|||||++|++||..|+++|++|+|+|+...
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 358999999999999999999999999999998643
No 196
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.24 E-value=9.7e-07 Score=88.56 Aligned_cols=42 Identities=33% Similarity=0.461 Sum_probs=39.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCcee
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~ 96 (529)
...+||+|||||++||+||+.|++.|++|+|+|+.+.+||..
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l 161 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLL 161 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCee
Confidence 456899999999999999999999999999999999999875
No 197
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.23 E-value=5e-06 Score=83.59 Aligned_cols=50 Identities=22% Similarity=0.298 Sum_probs=38.1
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
+.+.+++.|++++++++|++|..+ +.+..|.+ +|+++.+|.||+|+|...
T Consensus 197 l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~-~~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 197 LTEEMEANNITIATGETVERYEGD--GRVQKVVT-DKNAYDADLVVVAVGVRP 246 (447)
T ss_dssp HHHHHHTTTEEEEESCCEEEEECS--SBCCEEEE-SSCEEECSEEEECSCEEE
T ss_pred HHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEE-CCCEEECCEEEECcCCCC
Confidence 455567789999999999999863 33334666 456899999999998643
No 198
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.19 E-value=7.7e-06 Score=83.18 Aligned_cols=49 Identities=16% Similarity=0.333 Sum_probs=38.0
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHH
Q 009678 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~ 329 (529)
+.+.+++.|++|++++.|++|.. ++.+..|.+ +|+++.+|.||+|+|..
T Consensus 242 l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 242 MAKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-DKNEYDVDMVILAVGFR 290 (490)
T ss_dssp HHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-SSCEEECSEEEECCCEE
T ss_pred HHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-CCcEEECCEEEECCCCC
Confidence 45556778999999999999985 333334555 67789999999999864
No 199
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.19 E-value=9.9e-07 Score=84.42 Aligned_cols=41 Identities=44% Similarity=0.664 Sum_probs=36.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeE
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~ 97 (529)
..+||+|||||++|+++|+.|++.|++|+|+|+ ..+||.+.
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~ 55 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTA 55 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGG
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCcccc
Confidence 457999999999999999999999999999999 56777653
No 200
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.14 E-value=2.1e-06 Score=90.81 Aligned_cols=44 Identities=32% Similarity=0.515 Sum_probs=40.1
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeE
Q 009678 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (529)
Q Consensus 54 ~~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~ 97 (529)
.+..+||+|||||++|++||..|+++|++|+|+|+++.+||...
T Consensus 370 ~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 370 AVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 34578999999999999999999999999999999999998764
No 201
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.06 E-value=2e-05 Score=79.99 Aligned_cols=35 Identities=26% Similarity=0.467 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 46999999999999999999999999999998654
No 202
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.05 E-value=2.6e-06 Score=86.14 Aligned_cols=56 Identities=16% Similarity=0.122 Sum_probs=44.8
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
..+.+.+.+.++++|++|+++++|++|..+ ++ ...|++. ++++.+|.||+|+|...
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~-~~~v~~~-~~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHM-DG-EFVLTTT-HGELRADKLLVATGRTP 271 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEE-TT-EEEEEET-TEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CC-EEEEEEC-CcEEEcCEEEECCCCCc
Confidence 456778888899999999999999999863 33 3356776 44899999999999754
No 203
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.05 E-value=2.1e-05 Score=79.39 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=31.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
.+|+|||||.+|+.+|..|++.|.+|+|+|+.++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 203 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPE 203 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 5999999999999999999999999999998644
No 204
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.05 E-value=2.7e-06 Score=88.79 Aligned_cols=41 Identities=29% Similarity=0.395 Sum_probs=37.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCcee
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~ 96 (529)
..+||+|||||++|+++|+.|+++|++|+|+|+....||.+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 46899999999999999999999999999999999988844
No 205
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.04 E-value=3.3e-06 Score=82.97 Aligned_cols=35 Identities=34% Similarity=0.393 Sum_probs=32.8
Q ss_pred CeEEEECCChHHHHHHHHHHHC--CCCeEEEeccccC
Q 009678 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~--g~~V~llEa~~~~ 92 (529)
+||+|||||++||++|..|+++ |++|+|+|+...+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999998765
No 206
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.02 E-value=2.8e-06 Score=84.84 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
.++||+|||||++||++|+.|+++|++|+|+|++.
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45799999999999999999999999999999976
No 207
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.99 E-value=2.8e-06 Score=85.66 Aligned_cols=41 Identities=27% Similarity=0.412 Sum_probs=37.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeE
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~ 97 (529)
.++||+|||||++|++||..|++.|++|+|+|+ +.+||.+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 458999999999999999999999999999999 78898764
No 208
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.98 E-value=3.3e-06 Score=85.88 Aligned_cols=39 Identities=26% Similarity=0.401 Sum_probs=36.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCcee
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~ 96 (529)
++||+|||||++|++||..|++.|++|+|+|++ .+||.+
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc 46 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTC 46 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcc
Confidence 489999999999999999999999999999996 588875
No 209
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.97 E-value=4.2e-05 Score=77.39 Aligned_cols=51 Identities=20% Similarity=0.258 Sum_probs=38.6
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCCCCEEEEE-----EcCCcEEecCEEEEccCHH
Q 009678 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFL-----LTNGNVIDGDAYVFATPVD 329 (529)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~-----~~~G~~i~ad~VI~a~~~~ 329 (529)
+.+.+++.|++|+++++|++|..++++.+ .++ +.+|+++.+|.||+|+|..
T Consensus 226 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 226 FQRILQKQGFKFKLNTKVTGATKKSDGKI-DVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEECTTSCE-EEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred HHHHHHHCCCEEEeCceEEEEEEcCCceE-EEEEEecCCCCceEEEcCEEEECcCCC
Confidence 44556778999999999999997544423 354 3466689999999999864
No 210
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.96 E-value=3.2e-05 Score=77.86 Aligned_cols=35 Identities=29% Similarity=0.476 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 204 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 46999999999999999999999999999998644
No 211
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.95 E-value=3.9e-05 Score=77.77 Aligned_cols=50 Identities=16% Similarity=0.112 Sum_probs=38.5
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
+.+.+++.|++|+++++|++|..+ +.+..+.+.+ +++.+|.||+|+|...
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~~-~~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 233 IYKEADKHHIEILTNENVKAFKGN--ERVEAVETDK-GTYKADLVLVSVGVKP 282 (480)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEES--SBEEEEEETT-EEEECSEEEECSCEEE
T ss_pred HHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEECC-CEEEcCEEEECcCCCc
Confidence 455567789999999999999863 4454566654 4899999999998753
No 212
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.91 E-value=3.1e-05 Score=77.97 Aligned_cols=35 Identities=29% Similarity=0.484 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 205 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER 205 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 46899999999999999999999999999998643
No 213
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.91 E-value=5.2e-05 Score=76.59 Aligned_cols=35 Identities=23% Similarity=0.415 Sum_probs=32.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 210 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTL 210 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCc
Confidence 45899999999999999999999999999998654
No 214
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.90 E-value=1.1e-05 Score=77.19 Aligned_cols=39 Identities=33% Similarity=0.283 Sum_probs=34.9
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCcee
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~ 96 (529)
+||+|||||.+|+.||+.|+++|.+|+|+|++...+...
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~ 40 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPA 40 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCcc
Confidence 699999999999999999999999999999987655443
No 215
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.90 E-value=3e-05 Score=78.68 Aligned_cols=51 Identities=14% Similarity=0.083 Sum_probs=39.1
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcC----CcEEecCEEEEccCHHH
Q 009678 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----GNVIDGDAYVFATPVDI 330 (529)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~----G~~i~ad~VI~a~~~~~ 330 (529)
+.+.+++.|++|++++.|++|+.++++ ..|++.+ |+++.+|.||+|+|...
T Consensus 232 l~~~l~~~gV~i~~~~~v~~i~~~~~~--~~v~~~~~~~~g~~~~~D~vv~a~G~~p 286 (482)
T 1ojt_A 232 WQKQNEYRFDNIMVNTKTVAVEPKEDG--VYVTFEGANAPKEPQRYDAVLVAAGRAP 286 (482)
T ss_dssp HHHHHGGGEEEEECSCEEEEEEEETTE--EEEEEESSSCCSSCEEESCEEECCCEEE
T ss_pred HHHHHHhcCCEEEECCEEEEEEEcCCe--EEEEEeccCCCceEEEcCEEEECcCCCc
Confidence 455567789999999999999864333 2466665 77799999999998653
No 216
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.87 E-value=7.6e-05 Score=75.36 Aligned_cols=51 Identities=16% Similarity=0.180 Sum_probs=37.4
Q ss_pred HHHHH-HHcCcEEEecceeeEEEecCCCCEEEEEEc--CC--cEEecCEEEEccCHHH
Q 009678 278 IVEHI-QSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NG--NVIDGDAYVFATPVDI 330 (529)
Q Consensus 278 l~~~l-~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~--~G--~~i~ad~VI~a~~~~~ 330 (529)
+.+.+ +++|++|+++++|++|+.++++ + .|++. +| +++.+|.||+|+|...
T Consensus 221 l~~~l~~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~~~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 221 LVGALAKNEKMKFMTSTKVVGGTNNGDS-V-SLEVEGKNGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp HHHHHHHHTCCEEECSCEEEEEEECSSS-E-EEEEECC---EEEEEESEEEECSCEEE
T ss_pred HHHHHhhcCCcEEEeCCEEEEEEEcCCe-E-EEEEEcCCCceEEEECCEEEECCCccc
Confidence 45556 6789999999999999874443 3 45554 66 5799999999998653
No 217
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.87 E-value=7.2e-06 Score=82.75 Aligned_cols=56 Identities=18% Similarity=0.207 Sum_probs=43.8
Q ss_pred ccchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEc-C--Cc--EEecCEEEEccCHH
Q 009678 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-N--GN--VIDGDAYVFATPVD 329 (529)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~-~--G~--~i~ad~VI~a~~~~ 329 (529)
..+.+.+.+.+++.|+++++++.|++|..++++ + .|++. + |+ ++.+|.||+|+|..
T Consensus 210 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~-~-~v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 210 PETAALLRRALEKEGIRVRTKTKAVGYEKKKDG-L-HVRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTE-E-EEEEEETTCCSCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCE-E-EEEEeecCCCceeEEEcCEEEECCCcc
Confidence 345667788888999999999999999874333 3 46654 6 76 79999999999864
No 218
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.86 E-value=8.7e-05 Score=74.83 Aligned_cols=35 Identities=29% Similarity=0.412 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 205 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPR 205 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 36999999999999999999999999999997643
No 219
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.79 E-value=6.4e-05 Score=73.19 Aligned_cols=34 Identities=32% Similarity=0.462 Sum_probs=31.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
.+++|||||.+|+-+|..|++.|.+|+|+|+.+.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 177 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCe
Confidence 5899999999999999999999999999998643
No 220
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.79 E-value=1.3e-05 Score=88.01 Aligned_cols=41 Identities=34% Similarity=0.602 Sum_probs=38.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeE
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~ 97 (529)
.+||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 57999999999999999999999999999999999999876
No 221
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.79 E-value=0.00013 Score=73.77 Aligned_cols=50 Identities=16% Similarity=0.183 Sum_probs=38.0
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCC---cEEecCEEEEccCHH
Q 009678 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPVD 329 (529)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G---~~i~ad~VI~a~~~~ 329 (529)
+.+.+++.|++|+++++|++|+.++++ + .+++.++ +++.+|.||+|+|..
T Consensus 227 l~~~l~~~Gv~v~~~~~v~~i~~~~~~-~-~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 227 AQKILTKQGLKILLGARVTGTEVKNKQ-V-TVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp HHHHHHHTTEEEEETCEEEEEEECSSC-E-EEEEESSSEEEEEEESEEEECSCEE
T ss_pred HHHHHHhCCCEEEECCEEEEEEEcCCE-E-EEEEEeCCCcEEEECCEEEEeeCCc
Confidence 445567789999999999999975444 3 3555544 579999999999864
No 222
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.78 E-value=0.00014 Score=73.90 Aligned_cols=35 Identities=23% Similarity=0.356 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 208 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGS 208 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 46899999999999999999999999999998644
No 223
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.77 E-value=1.7e-05 Score=87.73 Aligned_cols=41 Identities=32% Similarity=0.500 Sum_probs=38.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEeccccCCcee
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKI 96 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~~~GG~~ 96 (529)
..+||+|||||++||+||+.|++.|+ +|+|+|+.+.+||..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 46799999999999999999999999 799999999999975
No 224
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.76 E-value=0.00014 Score=73.91 Aligned_cols=34 Identities=29% Similarity=0.507 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+|+|||||.+|+-.|..|++.|.+|+|+|+.+
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 231 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD 231 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc
Confidence 4589999999999999999999999999998754
No 225
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.75 E-value=8.3e-05 Score=75.14 Aligned_cols=35 Identities=29% Similarity=0.447 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 46999999999999999999999999999998643
No 226
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.72 E-value=1.7e-05 Score=79.49 Aligned_cols=40 Identities=25% Similarity=0.274 Sum_probs=37.2
Q ss_pred CCeEEEECCChHHHHHHHHHHH-C------CCCeEEEeccccCCcee
Q 009678 57 PLKVVIAGAGLAGLSTAKYLAD-A------GHKPLLLEARDVLGGKI 96 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~-~------g~~V~llEa~~~~GG~~ 96 (529)
.+||+|||||++|++||..|++ . |++|+|+|+.+.+||.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~ 49 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLV 49 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCcc
Confidence 4699999999999999999999 7 99999999998888876
No 227
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.72 E-value=2.3e-05 Score=78.66 Aligned_cols=41 Identities=24% Similarity=0.282 Sum_probs=37.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC--CCeEEEeccccCCcee
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARDVLGGKI 96 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g--~~V~llEa~~~~GG~~ 96 (529)
..+||+|||||++|+++|..|++.| ++|+|+|+.+.+||..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~ 47 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLV 47 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCcee
Confidence 4579999999999999999999988 9999999999888865
No 228
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.71 E-value=2e-05 Score=82.28 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=32.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCCeEEEec
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa 88 (529)
...+||+|||||++|++||..|++.|++|+|+|+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~ 138 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY 138 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEec
Confidence 3568999999999999999999999999999997
No 229
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.70 E-value=2.4e-05 Score=80.71 Aligned_cols=37 Identities=41% Similarity=0.627 Sum_probs=33.9
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
+..+|++|||||.+|+++|.+|++.|.+|+|||+...
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3578999999999999999999999999999999764
No 230
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.63 E-value=0.00042 Score=69.81 Aligned_cols=36 Identities=22% Similarity=0.346 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC--CCCeEEEecccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~--g~~V~llEa~~~ 91 (529)
...+|+|||||.+|+-+|..|++. +.+|+++++++.
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 356899999999999999999998 889999998754
No 231
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.62 E-value=4.3e-05 Score=75.68 Aligned_cols=36 Identities=31% Similarity=0.290 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--CeEEEecccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~~~ 91 (529)
..+||+|||||++|++||..|++.|+ +|+|+|+++.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~ 43 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAE 43 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCC
Confidence 46899999999999999999999988 5999999754
No 232
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.57 E-value=6.7e-05 Score=60.04 Aligned_cols=106 Identities=10% Similarity=0.028 Sum_probs=55.9
Q ss_pred cEEecCEEEEccCHHHHhhhCCCchhhhHHHHHhhcCCCcCeEEEEEEecCCcccccCcccccCCcceeeeccccccccc
Q 009678 315 NVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSSSLLSVYADMSLTCKEY 394 (529)
Q Consensus 315 ~~i~ad~VI~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 394 (529)
++++||+||+|+|..+++.+..++..|....++++++.+.+..|+.+.|+++||+... ..+ +.+. ..
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~-~~g---------d~s~---~~ 70 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFTE-ADW---------KREL---DA 70 (130)
T ss_dssp EEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCCH-HHH---------HHHH---HH
T ss_pred eEEEcCEEEEcCCHHHHhcCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCCC-ccc---------cccC---CC
Confidence 3799999999999999998855545677778999999999999999999999997522 110 1110 00
Q ss_pred cCCCCceEEEE-ecC-ccccCCCChHHHHHHHHHHHHHhCCCC
Q 009678 395 YNPNQSMLELV-FAP-AEEWISCSDSEIIDATMKELAKLFPDE 435 (529)
Q Consensus 395 ~~~~~~~l~~~-~~~-~~~~~~~~~~~~~~~~l~~l~~~~p~~ 435 (529)
..++ .++.++ .++ +..|..++. +-.+.++..|.+++|+.
T Consensus 71 ~~pg-~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~ 111 (130)
T 2e1m_B 71 IAPG-LYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSV 111 (130)
T ss_dssp HSTT-HHHHHHHHCCCSCCCC----------------------
T ss_pred CCCe-EEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCC
Confidence 0112 121122 122 356766655 66788899999999963
No 233
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.57 E-value=0.00029 Score=70.63 Aligned_cols=34 Identities=26% Similarity=0.424 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+++|||+|.+|+-+|..|++.|.+|+|+|+.+
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 181 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE 181 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC
Confidence 4589999999999999999999999999999754
No 234
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.54 E-value=0.00051 Score=65.83 Aligned_cols=34 Identities=26% Similarity=0.353 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 4689999999999999999999999999998753
No 235
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.53 E-value=0.00074 Score=69.20 Aligned_cols=49 Identities=14% Similarity=0.121 Sum_probs=40.6
Q ss_pred hHHHHHHHHHcCcEEEe--cceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 275 CLPIVEHIQSLGGEVRL--NSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 275 ~~~l~~~l~~~G~~i~~--~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
-..+.+.+.+.+|++.. +++|++|.. + +|.+.+| ++.+|.||+|||...
T Consensus 341 ~~~y~~al~~~nV~lv~~~~~~I~~it~--~----gv~~~dG-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 341 ETNYYETYNRDNVHLVDIREAPIQEVTP--E----GIKTADA-AYDLDVIIYATGFDA 391 (545)
T ss_dssp ESSHHHHTTSTTEEEEETTTSCEEEEET--T----EEEESSC-EEECSEEEECCCCBS
T ss_pred CccHHHHhcCCCEEEEecCCCCceEEcc--C----eEEeCCC-eeecCEEEECCcccc
Confidence 34578888888899986 889999973 3 4788999 999999999999864
No 236
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.51 E-value=0.00073 Score=68.49 Aligned_cols=51 Identities=16% Similarity=0.151 Sum_probs=37.3
Q ss_pred HHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcC---Cc--EEecCEEEEccCHH
Q 009678 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGDAYVFATPVD 329 (529)
Q Consensus 278 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~---G~--~i~ad~VI~a~~~~ 329 (529)
+.+.+++.|+++++++.|++|...+++.+ .|++.+ |+ ++.+|.||+|+|..
T Consensus 231 l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 231 VTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEcccCC
Confidence 44556778999999999999987544443 354433 54 47899999999864
No 237
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.51 E-value=6.7e-05 Score=73.66 Aligned_cols=34 Identities=32% Similarity=0.449 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC--CCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g--~~V~llEa~~ 90 (529)
++||+|||||++|++||..|++.| .+|+|+|++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 579999999999999999999998 4689999764
No 238
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.50 E-value=4.2e-05 Score=78.44 Aligned_cols=37 Identities=30% Similarity=0.379 Sum_probs=33.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccC
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~ 92 (529)
..++|+||||||.+|+.+|.+|++ |.+|+|||+....
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cCcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 356899999999999999999999 9999999997654
No 239
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.49 E-value=0.00041 Score=67.30 Aligned_cols=34 Identities=24% Similarity=0.220 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 196 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH 196 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 4689999999999999999999999999998753
No 240
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.45 E-value=0.0017 Score=66.48 Aligned_cols=48 Identities=19% Similarity=0.212 Sum_probs=38.6
Q ss_pred HHHHHHHHcCcEEEe--cceeeEEEecCCCCEEEEEEcCCcEEecCEEEEccCHHH
Q 009678 277 PIVEHIQSLGGEVRL--NSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (529)
Q Consensus 277 ~l~~~l~~~G~~i~~--~t~V~~I~~~~~~~~~~v~~~~G~~i~ad~VI~a~~~~~ 330 (529)
.+.+.+.+.++++.. +++|++|.. + +|.+.+|+.+.+|.||+|||...
T Consensus 335 ~y~~~l~~~nV~lv~~~~~~I~~it~--~----gv~~~dG~~~~~DvIV~ATGf~~ 384 (540)
T 3gwf_A 335 GYYEVYNRPNVEAVAIKENPIREVTA--K----GVVTEDGVLHELDVLVFATGFDA 384 (540)
T ss_dssp STGGGGGSTTEEEEETTTSCEEEECS--S----EEEETTCCEEECSEEEECCCBSC
T ss_pred cHHHHhcCCCEEEEeCCCCCccEEec--C----eEEcCCCCEEECCEEEECCccCc
Confidence 355666677899986 789999963 3 47899998899999999999754
No 241
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.34 E-value=0.00055 Score=66.56 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=30.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+|+|||+|.+|+-+|..|++.|.+|+|+++++
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~ 199 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT 199 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC
Confidence 4589999999999999999999999999999753
No 242
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.30 E-value=0.0016 Score=61.79 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=30.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..+|+|||+|.+|+-.|..|++.|.+|+++++.
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~ 187 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYM 187 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcC
Confidence 468999999999999999999999999999864
No 243
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.21 E-value=0.0024 Score=66.44 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=29.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
.+|+|||||.+|+-+|..|++.|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999864
No 244
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.21 E-value=0.0025 Score=60.12 Aligned_cols=33 Identities=30% Similarity=0.328 Sum_probs=30.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..+|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 176 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFA 176 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeC
Confidence 468999999999999999999999999999864
No 245
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.20 E-value=0.0023 Score=65.23 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=29.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEec
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa 88 (529)
.+++|||||.+|+-.|..|++.|.+|+|+++
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~ 241 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVR 241 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEec
Confidence 3699999999999999999999999999986
No 246
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.16 E-value=0.0031 Score=59.53 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 4699999999999999999999999999998643
No 247
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.15 E-value=0.0031 Score=64.61 Aligned_cols=36 Identities=14% Similarity=0.328 Sum_probs=33.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
...+|+|||+|.+|+-+|..|++.+.+|+|+++.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 456999999999999999999999999999998764
No 248
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.14 E-value=0.00026 Score=73.27 Aligned_cols=37 Identities=35% Similarity=0.457 Sum_probs=33.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHH-CCCCeEEEeccccC
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDVL 92 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~-~g~~V~llEa~~~~ 92 (529)
.++|++|||||.+|+++|.+|++ .|.+|+|||+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 56899999999999999999999 79999999997553
No 249
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.93 E-value=0.0056 Score=61.27 Aligned_cols=45 Identities=13% Similarity=0.106 Sum_probs=33.3
Q ss_pred cCcEEEecceeeEEEecCCC-CEEEEEEc---------------CC--cEEecCEEEEccCHH
Q 009678 285 LGGEVRLNSRVQKIELNDDG-TVKNFLLT---------------NG--NVIDGDAYVFATPVD 329 (529)
Q Consensus 285 ~G~~i~~~t~V~~I~~~~~~-~~~~v~~~---------------~G--~~i~ad~VI~a~~~~ 329 (529)
+|++|++++.+++|..++++ .+.+|++. +| +++.+|.||+|+|..
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~ 332 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYK 332 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEE
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCC
Confidence 68999999999999864335 55455442 34 478999999999853
No 250
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.92 E-value=0.0033 Score=63.24 Aligned_cols=34 Identities=35% Similarity=0.525 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 205 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD 205 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC
Confidence 4689999999999999999999999999999754
No 251
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.91 E-value=0.0036 Score=58.49 Aligned_cols=38 Identities=21% Similarity=0.357 Sum_probs=31.8
Q ss_pred CCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHh
Q 009678 473 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 512 (529)
Q Consensus 473 ~~~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i~~~l~ 512 (529)
+..+|||.+||.... +..+..|+..|..||..|...+.
T Consensus 255 t~~~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 255 TTARGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp CSSTTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHh
Confidence 446899999998873 26788999999999999988774
No 252
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.88 E-value=0.0063 Score=57.57 Aligned_cols=33 Identities=27% Similarity=0.350 Sum_probs=30.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..+|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~ 186 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRR 186 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeC
Confidence 468999999999999999999999999998864
No 253
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.73 E-value=0.0015 Score=61.89 Aligned_cols=35 Identities=17% Similarity=0.368 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
..+|+|||||.+|+-+|..|++.|.+|+|+|++++
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 35899999999999999999999999999998654
No 254
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.69 E-value=0.00053 Score=67.06 Aligned_cols=38 Identities=21% Similarity=0.225 Sum_probs=33.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG 94 (529)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++..
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 183 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLE 183 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch
Confidence 35899999999999999999999999999999876543
No 255
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.64 E-value=0.0046 Score=65.79 Aligned_cols=35 Identities=29% Similarity=0.274 Sum_probs=31.4
Q ss_pred CCCeEEEEC--CChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAG--AGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIG--aGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
...+|+||| ||.+|+-+|..|++.|.+|+|+++.+
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 356899999 99999999999999999999999753
No 256
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.57 E-value=0.0074 Score=57.37 Aligned_cols=33 Identities=21% Similarity=0.268 Sum_probs=29.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..+|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~ 186 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRR 186 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEec
Confidence 468999999999999999999998899998864
No 257
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.37 E-value=0.005 Score=50.39 Aligned_cols=37 Identities=14% Similarity=0.146 Sum_probs=33.0
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
+.+.+|+|||.|-.|...|..|.+.|++|+++|++..
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 3456899999999999999999999999999998653
No 258
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.37 E-value=0.012 Score=64.65 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=30.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..+|+|||+|..|+-+|..|++.|.+|+|+|++
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~ 316 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDAR 316 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESC
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECC
Confidence 358999999999999999999999999999974
No 259
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.35 E-value=0.0032 Score=62.14 Aligned_cols=39 Identities=31% Similarity=0.364 Sum_probs=34.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG 94 (529)
...+|+|||+|.+|+-+|..|++.|.+|+++|+.+++-.
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 180 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV 180 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch
Confidence 356899999999999999999999999999999876543
No 260
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.29 E-value=0.005 Score=51.42 Aligned_cols=38 Identities=24% Similarity=0.392 Sum_probs=33.0
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 54 ~~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
.....+|+|||+|..|...|..|.+.|++|++++++..
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 34567899999999999999999999999999998643
No 261
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.16 E-value=0.0018 Score=61.24 Aligned_cols=33 Identities=27% Similarity=0.408 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..+|+|||||..|+-+|..|++.|.+|+|+|+.
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~ 184 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRR 184 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeeccc
Confidence 468999999999999999999999999999964
No 262
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.09 E-value=0.0062 Score=49.61 Aligned_cols=34 Identities=32% Similarity=0.600 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
.++|+|||+|..|...|..|.+.|++|+++|++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999753
No 263
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.85 E-value=0.0092 Score=48.81 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+|+|+|+|..|...|..|.+.|++|+++|++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4589999999999999999999999999999864
No 264
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=95.77 E-value=0.0068 Score=59.64 Aligned_cols=38 Identities=26% Similarity=0.279 Sum_probs=34.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG 94 (529)
..+|+|||+|.+|+-+|..|.+.|.+|+++|+.+.+..
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~ 179 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA 179 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh
Confidence 46899999999999999999999999999999876543
No 265
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.76 E-value=0.0059 Score=61.11 Aligned_cols=37 Identities=16% Similarity=0.270 Sum_probs=33.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~G 93 (529)
..+++|||+|.+|+-.|..|++.|.+|+|+|+.+.+-
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 185 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVL 185 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchh
Confidence 4589999999999999999999999999999987643
No 266
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=95.66 E-value=0.0077 Score=59.47 Aligned_cols=38 Identities=32% Similarity=0.371 Sum_probs=34.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG 94 (529)
..+|+|||+|.+|+-+|..|.+.|.+|+++|+.+++-.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~ 189 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA 189 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh
Confidence 46899999999999999999999999999999877543
No 267
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.65 E-value=0.011 Score=46.43 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC-CCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g-~~V~llEa~~ 90 (529)
..+|+|+|+|..|...|..|.+.| ++|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 458999999999999999999999 8999999753
No 268
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.64 E-value=0.005 Score=61.14 Aligned_cols=37 Identities=24% Similarity=0.304 Sum_probs=33.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~G 93 (529)
..+|+|||+|.+|+-+|..|++.|.+|+|+|+.+.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 185 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL 185 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc
Confidence 4689999999999999999999999999999977653
No 269
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.56 E-value=0.011 Score=59.21 Aligned_cols=36 Identities=25% Similarity=0.503 Sum_probs=33.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~ 92 (529)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~ 202 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRI 202 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 368999999999999999999999999999998764
No 270
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.53 E-value=0.011 Score=59.15 Aligned_cols=37 Identities=22% Similarity=0.347 Sum_probs=33.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~G 93 (529)
..+++|||+|.+|+-+|..|++.|.+|+++|+.+++.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 183 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL 183 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc
Confidence 4689999999999999999999999999999987654
No 271
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.47 E-value=0.013 Score=55.01 Aligned_cols=35 Identities=31% Similarity=0.421 Sum_probs=30.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
...+|+|||||..|...|..++..|++|+|+|...
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34589999999999999999999999999999754
No 272
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.35 E-value=0.021 Score=47.45 Aligned_cols=33 Identities=12% Similarity=0.249 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
+.+|+|+|+|-.|...|..|.+.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 457999999999999999999999999999986
No 273
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=95.33 E-value=0.021 Score=56.74 Aligned_cols=59 Identities=24% Similarity=0.304 Sum_probs=44.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCceeEeeccCCCCeeeeeeeeecCCcchHHHHHHHcCCCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIND 132 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~ 132 (529)
..+++|||||..|+-.|..|++.|.+|+|+|+.+++...... .....+.+.+++.|++.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~-----------------~~~~~~~~~l~~~gV~i 205 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDA-----------------DMNQPILDELDKREIPY 205 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCG-----------------GGGHHHHHHHHHTTCCE
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccccc-----------------hhHHHHHHHhhccceEE
Confidence 458999999999999999999999999999998775432211 11234667777777754
No 274
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.31 E-value=0.017 Score=57.67 Aligned_cols=37 Identities=30% Similarity=0.425 Sum_probs=33.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~G 93 (529)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 203 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL 203 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh
Confidence 3589999999999999999999999999999987643
No 275
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.21 E-value=0.015 Score=57.84 Aligned_cols=38 Identities=34% Similarity=0.562 Sum_probs=33.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG 94 (529)
.++|+|||.|.+|+++|..|+++|++|++.|.+...-|
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~ 42 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG 42 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch
Confidence 35799999999999999999999999999999776433
No 276
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.14 E-value=0.011 Score=60.99 Aligned_cols=37 Identities=30% Similarity=0.390 Sum_probs=33.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~G 93 (529)
..+|+|||||.+|+-+|..|++.|.+|+++|+.+.+.
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 187 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM 187 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc
Confidence 4589999999999999999999999999999977543
No 277
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.12 E-value=0.023 Score=46.33 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
.+|+|+|+|..|...|..|.+.|++|++++++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999753
No 278
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.07 E-value=0.018 Score=57.44 Aligned_cols=35 Identities=23% Similarity=0.327 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..++|.|||.|.+|+++|..|+++|++|++.|.+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 35689999999999999999999999999999864
No 279
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.03 E-value=0.023 Score=56.95 Aligned_cols=37 Identities=32% Similarity=0.456 Sum_probs=33.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~G 93 (529)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l 202 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL 202 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc
Confidence 3589999999999999999999999999999986643
No 280
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.00 E-value=0.028 Score=48.24 Aligned_cols=35 Identities=29% Similarity=0.364 Sum_probs=31.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~-g~~V~llEa~~ 90 (529)
...+|+|||+|..|...|..|.+. |++|+++|++.
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 355899999999999999999999 99999999864
No 281
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.74 E-value=0.032 Score=52.25 Aligned_cols=33 Identities=30% Similarity=0.503 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..+|.|||+|..|...|..|++.|++|+++|++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 457999999999999999999999999999975
No 282
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.60 E-value=0.038 Score=52.44 Aligned_cols=35 Identities=20% Similarity=0.243 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~ 90 (529)
...+|+|||||..|.+.|..|++.|+ +|+|+|...
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 45699999999999999999999998 999999754
No 283
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.60 E-value=0.026 Score=50.00 Aligned_cols=33 Identities=15% Similarity=0.248 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
++|+|||+|-.|...|..|.+.|++|+++|++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999754
No 284
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=94.57 E-value=0.026 Score=56.65 Aligned_cols=37 Identities=38% Similarity=0.477 Sum_probs=33.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHC-CCCeEEEeccccCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLG 93 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~-g~~V~llEa~~~~G 93 (529)
..+++|||+|.+|+-+|..|++. |.+|+++|+.+.+.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l 196 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIM 196 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccc
Confidence 46899999999999999999999 99999999976543
No 285
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.55 E-value=0.036 Score=55.78 Aligned_cols=37 Identities=30% Similarity=0.447 Sum_probs=33.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~G 93 (529)
..+++|||||.+|+-.|..|++.|.+|+|+|+.+++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 221 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL 221 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc
Confidence 4589999999999999999999999999999987643
No 286
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.47 E-value=0.04 Score=49.43 Aligned_cols=35 Identities=23% Similarity=0.471 Sum_probs=31.1
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGa-GiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+.|+|.|| |..|...|..|+++|++|+++.++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4568999998 9999999999999999999998753
No 287
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.45 E-value=0.039 Score=48.70 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
....|+|||||-.|...|..|.+.|.+|+|++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4578999999999999999999999999999864
No 288
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.42 E-value=0.033 Score=56.39 Aligned_cols=37 Identities=14% Similarity=0.245 Sum_probs=33.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~G 93 (529)
..+|+|||||.+|+-.|..|++.|.+|+|+|+.+++.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 212 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL 212 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC
Confidence 4599999999999999999999999999999987654
No 289
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.42 E-value=0.036 Score=52.21 Aligned_cols=34 Identities=32% Similarity=0.437 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+|.|||+|..|.+.|..|++.|++|+++|.+.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999754
No 290
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.42 E-value=0.028 Score=51.36 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+.|+|||||-.|+..|..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 45789999999999999999999999999998753
No 291
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.38 E-value=0.042 Score=55.03 Aligned_cols=37 Identities=19% Similarity=0.176 Sum_probs=33.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccC
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~ 92 (529)
...+|+|||+|.+|+-+|..|++.|.+|+|+++++.+
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 3568999999999999999999999999999987654
No 292
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.36 E-value=0.038 Score=55.31 Aligned_cols=35 Identities=34% Similarity=0.585 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
.+++|.|||+|..|+..|..|++.|++|++++.+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 57899999999999999999999999999999753
No 293
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.35 E-value=0.037 Score=52.84 Aligned_cols=36 Identities=31% Similarity=0.465 Sum_probs=32.9
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCC-CeEEEeccc
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~ 90 (529)
-.+.+|+|+|||.+|+.+|..|...|. +|+++|+..
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 356799999999999999999999998 999999874
No 294
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.35 E-value=0.038 Score=52.28 Aligned_cols=33 Identities=27% Similarity=0.454 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
++|+|||+|..|.+.|..|++.|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 589999999999999999999999999998754
No 295
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.32 E-value=0.048 Score=53.81 Aligned_cols=36 Identities=25% Similarity=0.302 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
.-.+|.|||+|..|...|..|++.|++|+++|.+..
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 346899999999999999999999999999998654
No 296
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.32 E-value=0.036 Score=51.41 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
.+|.|||+|..|...|..|++.|++|+++|++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 589999999999999999999999999999753
No 297
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.22 E-value=0.044 Score=53.74 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=33.2
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 54 ~~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
.....+|.|||.|..||..|..|++.|++|+.+|-+.
T Consensus 18 ~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 18 GSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp TCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3467799999999999999999999999999999754
No 298
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.08 E-value=0.039 Score=51.96 Aligned_cols=33 Identities=36% Similarity=0.551 Sum_probs=30.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
++|+|||+|..|.+.|..|++.|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 589999999999999999999999999998753
No 299
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.07 E-value=0.052 Score=52.40 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
...+|+|||+|.+|+.+|..|...|.+|+++|.+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45799999999999999999999999999999763
No 300
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=94.06 E-value=0.049 Score=55.48 Aligned_cols=35 Identities=23% Similarity=0.277 Sum_probs=31.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccccC
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~ 92 (529)
.+++|||||+.|+-.|..+++.|.+|+|+++...+
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L 258 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL 258 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc
Confidence 47999999999999999999999999999875443
No 301
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.05 E-value=0.055 Score=47.52 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
..++|.|||+|..|.+.|..|++.|++|++++++..
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 456899999999999999999999999999998654
No 302
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=94.04 E-value=0.043 Score=52.09 Aligned_cols=36 Identities=22% Similarity=0.477 Sum_probs=32.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
...+|+|||+|.+|+-+|..|++.|.+|+++++++.
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 193 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA 193 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc
Confidence 356899999999999999999999999999998654
No 303
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.00 E-value=0.052 Score=51.44 Aligned_cols=34 Identities=21% Similarity=0.131 Sum_probs=30.4
Q ss_pred CCeEEEECCChHHHH-HHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLS-TAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGls-aA~~L~~~g~~V~llEa~~ 90 (529)
.++|.|||.|.+|++ +|..|+++|++|++.|.+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 468999999999997 7888999999999999864
No 304
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.96 E-value=0.05 Score=51.88 Aligned_cols=34 Identities=32% Similarity=0.601 Sum_probs=31.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~ 89 (529)
.+.+|+|+|||.+|..+|..|...|. +|+|+|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 56799999999999999999999998 89999986
No 305
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.93 E-value=0.064 Score=54.26 Aligned_cols=37 Identities=16% Similarity=0.363 Sum_probs=33.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~G 93 (529)
..+++|||+|..|+-.|..|.+.|.+|+++|+.+.+.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 218 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL 218 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc
Confidence 3589999999999999999999999999999987654
No 306
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.91 E-value=0.049 Score=51.51 Aligned_cols=35 Identities=26% Similarity=0.410 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT 186 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc
Confidence 46899999999999999999999999999997643
No 307
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=93.90 E-value=0.049 Score=51.78 Aligned_cols=36 Identities=19% Similarity=0.385 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
...+|+|||+|.+|+-.|..|++.|.+|+++++++.
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 356899999999999999999999999999987643
No 308
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=93.83 E-value=0.05 Score=51.23 Aligned_cols=35 Identities=29% Similarity=0.433 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 179 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG 179 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 46899999999999999999999999999998754
No 309
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.83 E-value=0.056 Score=50.17 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=30.4
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
++|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 379999999999999999999999999998764
No 310
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.81 E-value=0.057 Score=51.00 Aligned_cols=34 Identities=29% Similarity=0.385 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC--CeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~~ 90 (529)
.++|+|||+|..|.+.|..|++.|+ +|++++++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 999999753
No 311
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=93.79 E-value=0.058 Score=54.23 Aligned_cols=37 Identities=32% Similarity=0.410 Sum_probs=33.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~G 93 (529)
..+|+|||||.+|+-+|..|++.|.+|+|+++.+++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 223 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc
Confidence 4589999999999999999999999999999977643
No 312
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.77 E-value=0.053 Score=50.25 Aligned_cols=34 Identities=32% Similarity=0.517 Sum_probs=30.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..++|.|||+|..|...|..|+ .|++|+++|++.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4679999999999999999999 999999999754
No 313
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.76 E-value=0.056 Score=51.75 Aligned_cols=35 Identities=29% Similarity=0.439 Sum_probs=31.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
...+|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45799999999999999999999999999999763
No 314
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.73 E-value=0.054 Score=53.91 Aligned_cols=37 Identities=8% Similarity=-0.056 Sum_probs=32.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCC-eEEEeccccC
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARDVL 92 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~-V~llEa~~~~ 92 (529)
...+|+|||+|.+|+-+|..|++.|.+ |+|+++++..
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 356899999999999999999999998 9999987543
No 315
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.70 E-value=0.066 Score=52.84 Aligned_cols=36 Identities=19% Similarity=0.488 Sum_probs=33.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
.+.++.|||.|..|+..|..|++.|++|++++.+..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 467999999999999999999999999999998654
No 316
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.66 E-value=0.069 Score=50.52 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-CeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~ 90 (529)
..+|+|||||..|.+.|..|++.|+ +|+++|...
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 3689999999999999999999998 999999753
No 317
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.65 E-value=0.067 Score=50.92 Aligned_cols=33 Identities=30% Similarity=0.285 Sum_probs=30.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
.++|+|||+|..|.+.|..|++.|++|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 358999999999999999999999999999874
No 318
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.63 E-value=0.054 Score=50.50 Aligned_cols=32 Identities=28% Similarity=0.342 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
++|+|||+|..|.+.|..|++.|++|++++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEec
Confidence 58999999999999999999999999999986
No 319
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.62 E-value=0.059 Score=53.46 Aligned_cols=33 Identities=24% Similarity=0.496 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
++|.|||+|..|+..|..|++.|++|++++.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999864
No 320
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.55 E-value=0.062 Score=53.48 Aligned_cols=36 Identities=28% Similarity=0.334 Sum_probs=32.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CC-CeEEEecccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADA-GH-KPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~-g~-~V~llEa~~~ 91 (529)
+.++|.|||+|..|+..|..|++. |+ +|+++|.+..
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 346899999999999999999999 99 9999998754
No 321
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.55 E-value=0.079 Score=49.78 Aligned_cols=35 Identities=20% Similarity=0.252 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..++|.|||.|..|...|..|++.|++|++++++.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 45799999999999999999999999999998764
No 322
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=93.52 E-value=0.068 Score=53.95 Aligned_cols=37 Identities=22% Similarity=0.316 Sum_probs=33.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHC---CCCeEEEeccccCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADA---GHKPLLLEARDVLG 93 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~---g~~V~llEa~~~~G 93 (529)
..+++|||||..|+-.|..|++. |.+|+|+|+.+++-
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l 230 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL 230 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc
Confidence 45999999999999999999999 99999999977643
No 323
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.52 E-value=0.061 Score=50.78 Aligned_cols=33 Identities=45% Similarity=0.656 Sum_probs=29.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
...+|+|||+|..|.+.|..|++.|++|+++ ++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 4568999999999999999999999999999 65
No 324
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=93.50 E-value=0.083 Score=52.61 Aligned_cols=43 Identities=21% Similarity=0.252 Sum_probs=35.0
Q ss_pred CCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhhHHhh
Q 009678 473 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAAR 517 (529)
Q Consensus 473 ~~~~~l~~aG~~~~~~~~~~~~gA~~Sg~~aA~~i~~~l~~~~~~ 517 (529)
+..++||.+||-.... ..+..|+..|+.||+.|...|....++
T Consensus 407 Ts~~~VfA~GD~~~g~--~~v~~A~~~G~~aA~~i~~~L~~~~~~ 449 (456)
T 2vdc_G 407 TNMDGVFAAGDIVRGA--SLVVWAIRDGRDAAEGIHAYAKAKAEA 449 (456)
T ss_dssp CSSTTEEECGGGGSSC--CSHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEeccccCCc--hHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 4568999999987643 578889999999999999998765544
No 325
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=93.39 E-value=0.074 Score=53.64 Aligned_cols=37 Identities=19% Similarity=0.246 Sum_probs=33.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHC---CCCeEEEeccccCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADA---GHKPLLLEARDVLG 93 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~---g~~V~llEa~~~~G 93 (529)
..+++|||||..|+-+|..|.+. |.+|+|+|+.+++.
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l 226 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL 226 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc
Confidence 45999999999999999999999 99999999987643
No 326
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.35 E-value=0.071 Score=51.09 Aligned_cols=34 Identities=32% Similarity=0.278 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..++|.|||+|..|.+.|..|++.|++|++++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3568999999999999999999999999999875
No 327
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.34 E-value=0.072 Score=50.09 Aligned_cols=32 Identities=31% Similarity=0.501 Sum_probs=30.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
++|.|||+|..|...|..|++.|++|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 58999999999999999999999999999874
No 328
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=93.29 E-value=0.069 Score=50.62 Aligned_cols=36 Identities=22% Similarity=0.414 Sum_probs=32.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
...+|+|||+|.+|+-+|..|++.|.+|+++++...
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~ 207 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH 207 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 356899999999999999999999999999997654
No 329
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.14 E-value=0.084 Score=49.37 Aligned_cols=33 Identities=27% Similarity=0.462 Sum_probs=30.0
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--CeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~~ 90 (529)
++|+|||+|..|.+.|+.|+..|+ +|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999999998 899999753
No 330
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.13 E-value=0.085 Score=52.58 Aligned_cols=34 Identities=24% Similarity=0.235 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+|.|||+|..|...|..|++.|++|+++|.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4579999999999999999999999999999754
No 331
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.09 E-value=0.084 Score=49.76 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-CeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~ 90 (529)
..+|+|||+|..|.+.|..|++.|+ +|+++|...
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4589999999999999999999998 999999753
No 332
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.06 E-value=0.1 Score=47.13 Aligned_cols=35 Identities=29% Similarity=0.433 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..++|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 46789999999999999999999999999998754
No 333
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=93.04 E-value=0.084 Score=53.71 Aligned_cols=37 Identities=16% Similarity=0.314 Sum_probs=33.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG 94 (529)
.+++|||||.+|+-+|..|++.|.+|+|+|+.+.+..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~ 251 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL 251 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc
Confidence 6899999999999999999999999999999876543
No 334
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.00 E-value=0.096 Score=48.56 Aligned_cols=33 Identities=27% Similarity=0.332 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
++|.|||.|..|...|..|++.|++|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 589999999999999999999999999998764
No 335
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=92.97 E-value=0.095 Score=54.22 Aligned_cols=38 Identities=21% Similarity=0.393 Sum_probs=33.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCCc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~GG 94 (529)
..+|+|||+|.+|+-+|..|++.|.+|+++|+.+.+..
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 224 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP 224 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc
Confidence 45899999999999999999999999999998776443
No 336
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.97 E-value=0.11 Score=49.10 Aligned_cols=33 Identities=21% Similarity=0.390 Sum_probs=30.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-CeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~ 89 (529)
..+|+|||+|..|...|..|+..|+ +|+|+|..
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 4589999999999999999999998 99999975
No 337
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.93 E-value=0.078 Score=51.92 Aligned_cols=35 Identities=31% Similarity=0.545 Sum_probs=31.0
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
...++|.|||+|..|+..|..|++ |++|+++|.+.
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 355799999999999999999998 99999999764
No 338
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.91 E-value=0.11 Score=45.73 Aligned_cols=35 Identities=29% Similarity=0.238 Sum_probs=30.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
...+|.|||+|..|...|..|++.|++|++++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999998753
No 339
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.91 E-value=0.084 Score=49.50 Aligned_cols=33 Identities=36% Similarity=0.508 Sum_probs=29.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
+++|+|||+|..|.+.|..|+ .|++|+++.++.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 368999999999999999999 999999998753
No 340
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=92.88 E-value=0.074 Score=54.05 Aligned_cols=35 Identities=29% Similarity=0.284 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 46899999999999999999999999999987544
No 341
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.79 E-value=0.1 Score=49.62 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=31.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
.+++|.|||+|..|.+.|..|++.|++|++++++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4679999999999999999999999999999875
No 342
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.78 E-value=0.11 Score=48.73 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..++|.|||.|..|...|..|++.|++|++++++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34689999999999999999999999999998753
No 343
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.75 E-value=0.081 Score=52.37 Aligned_cols=33 Identities=24% Similarity=0.462 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
++|.|||+|..|+..|..|++.|++|++++.+.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 379999999999999999999999999999753
No 344
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.57 E-value=0.11 Score=49.86 Aligned_cols=32 Identities=28% Similarity=0.351 Sum_probs=30.0
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
++|+|||+|..|...|..|++.|++|++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 68999999999999999999999999999874
No 345
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.57 E-value=0.11 Score=49.12 Aligned_cols=35 Identities=26% Similarity=0.354 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..++|.|||.|..|...|..|++.|++|++++++.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 45699999999999999999999999999998753
No 346
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.52 E-value=0.11 Score=51.89 Aligned_cols=34 Identities=29% Similarity=0.443 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+|.|||+|..|...|..|++.|++|+++|.+.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3479999999999999999999999999999764
No 347
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.47 E-value=0.055 Score=44.28 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=30.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+|+|||+|..|...|..|++.|.+|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 5689999999999999999999999999998753
No 348
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.45 E-value=0.13 Score=50.21 Aligned_cols=35 Identities=31% Similarity=0.476 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
...+|+|||+|.+|+.+|..|...|.+|+++|.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35689999999999999999999999999999753
No 349
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.29 E-value=0.13 Score=48.22 Aligned_cols=33 Identities=33% Similarity=0.534 Sum_probs=29.5
Q ss_pred CeEEEECCChHHHHHHHHHHHC--CCCeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~--g~~V~llEa~~ 90 (529)
++|+|||+|..|.+.|..|++. |++|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3799999999999999999985 78999999863
No 350
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.28 E-value=0.14 Score=47.95 Aligned_cols=33 Identities=33% Similarity=0.436 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-CeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~ 89 (529)
..+|+|||+|..|.+.|+.|++.|+ +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4689999999999999999999999 99999986
No 351
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.26 E-value=0.11 Score=49.47 Aligned_cols=31 Identities=29% Similarity=0.384 Sum_probs=29.2
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEec
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa 88 (529)
++|.|||+|..|.+.|..|++.|++|+++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 3699999999999999999999999999987
No 352
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.24 E-value=0.13 Score=48.15 Aligned_cols=35 Identities=34% Similarity=0.448 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
..+|+|||+|.+|+-+|..|++.|.+|+++++++.
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~ 181 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDE 181 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC
Confidence 46899999999999999999999999999997654
No 353
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.21 E-value=0.14 Score=50.04 Aligned_cols=36 Identities=31% Similarity=0.446 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
.+.+|+|||.|-.|...|..|.+.|++|+++|.+..
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 345799999999999999999999999999998653
No 354
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=92.20 E-value=0.17 Score=50.93 Aligned_cols=33 Identities=33% Similarity=0.598 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..+++|||||.+|+-+|..|++.|.+|+|+++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 358999999999999999999999999999974
No 355
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.20 E-value=0.1 Score=48.58 Aligned_cols=35 Identities=20% Similarity=0.156 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
..+|.|||.|..|...|..|++.|++|++++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999987643
No 356
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.09 E-value=0.16 Score=47.72 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~ 90 (529)
...+|+|||+|..|.+.|+.|+..|+ +|+|+|...
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 34689999999999999999999988 999999754
No 357
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=92.08 E-value=0.1 Score=50.98 Aligned_cols=32 Identities=25% Similarity=0.443 Sum_probs=29.2
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
++|.|||+|..|+..|..|++ |++|++++++.
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 379999999999999999999 99999999753
No 358
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.08 E-value=0.13 Score=46.55 Aligned_cols=34 Identities=35% Similarity=0.511 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-CeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~ 90 (529)
..+|+|||+|-.|..+|..|++.|. +|+|+|...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4689999999999999999999997 899999754
No 359
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.06 E-value=0.15 Score=47.67 Aligned_cols=32 Identities=38% Similarity=0.525 Sum_probs=29.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC-CeEEEecc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~ 89 (529)
.+|+|||+|..|...|+.|+..|+ +|+++|..
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 589999999999999999999986 89999965
No 360
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=92.04 E-value=0.16 Score=46.59 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=30.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..+.++|+|+|-+|.++|..|++.|.+|+|+.++
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 3468999999999999999999999999999875
No 361
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.03 E-value=0.12 Score=47.98 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
++|.|||.|..|...|..|++.|++|++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 479999999999999999999999999998764
No 362
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=91.87 E-value=0.15 Score=44.64 Aligned_cols=31 Identities=32% Similarity=0.425 Sum_probs=28.9
Q ss_pred eEEEEC-CChHHHHHHHHHHHCCCCeEEEecc
Q 009678 59 KVVIAG-AGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 59 dVvIIG-aGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
+|+||| +|..|...|..|++.|++|++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 699999 9999999999999999999999864
No 363
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.85 E-value=0.14 Score=47.90 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
.++|.|||.|..|...|..|++.|++|++++++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4689999999999999999999999999998753
No 364
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=91.85 E-value=0.16 Score=50.72 Aligned_cols=36 Identities=25% Similarity=0.395 Sum_probs=33.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~ 92 (529)
..+++|||+|.+|+-.|..|++.|.+|+++|+.+.+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~ 205 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEI 205 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 468999999999999999999999999999997754
No 365
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.81 E-value=0.065 Score=53.35 Aligned_cols=35 Identities=23% Similarity=0.384 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
.++|+|+|+|-.|...|..|.+.|++|+|+|++..
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 56899999999999999999999999999998643
No 366
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=91.76 E-value=0.17 Score=50.96 Aligned_cols=37 Identities=32% Similarity=0.509 Sum_probs=33.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccccCC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~~G 93 (529)
..+++|||+|.+|+-.|..|++.|.+|+++|+.+.+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l 227 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL 227 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc
Confidence 4589999999999999999999999999999977643
No 367
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.76 E-value=0.17 Score=49.00 Aligned_cols=35 Identities=26% Similarity=0.449 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
...+|+|||+|.+|+.+|..|...|.+|+++|.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999753
No 368
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.73 E-value=0.23 Score=46.63 Aligned_cols=34 Identities=15% Similarity=0.188 Sum_probs=30.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--CeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~ 89 (529)
...+|+|||+|..|.+.|+.|+..|+ +|+++|..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 45799999999999999999999987 89999974
No 369
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.72 E-value=0.18 Score=48.41 Aligned_cols=34 Identities=32% Similarity=0.480 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
...|+|+|+|.+|+.+|..|+..|.+|++++++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999998753
No 370
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.68 E-value=0.16 Score=47.82 Aligned_cols=33 Identities=33% Similarity=0.369 Sum_probs=30.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC--CeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~ 89 (529)
..+|+|||+|..|.+.|+.|+..+. +|+++|..
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999987 89999975
No 371
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.64 E-value=0.14 Score=48.17 Aligned_cols=32 Identities=34% Similarity=0.435 Sum_probs=29.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--CeEEEecc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~ 89 (529)
++|+|||+|..|.+.|..|++.|+ +|+++|..
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 379999999999999999999998 99999975
No 372
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=91.62 E-value=0.25 Score=46.17 Aligned_cols=35 Identities=20% Similarity=0.294 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
...+|.|||.|..|...|..|++.|++|++++++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999998753
No 373
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.60 E-value=0.18 Score=48.33 Aligned_cols=35 Identities=17% Similarity=0.389 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..++|.|||.|..|...|..|++.|++|++++++.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34799999999999999999999999999998753
No 374
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.58 E-value=0.2 Score=45.57 Aligned_cols=33 Identities=24% Similarity=0.207 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..+++|||+|-+|-++|+.|++.|.+|+|+.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 679999999999999999999999999999775
No 375
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.53 E-value=0.2 Score=48.18 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
++|+|||||..|..+|+.+.+.|++|+++|.+..
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 5899999999999999999999999999997654
No 376
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=91.49 E-value=0.14 Score=47.38 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=29.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--CeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~~ 90 (529)
++|+|||+|..|.+.|+.|++.|+ +|+|+|...
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 479999999999999999999987 899999753
No 377
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.43 E-value=0.11 Score=45.89 Aligned_cols=33 Identities=21% Similarity=0.211 Sum_probs=29.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEE-Eecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLL-LEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~l-lEa~ 89 (529)
.++|.|||+|..|.+.|..|++.|++|++ ++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 46899999999999999999999999998 7654
No 378
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=91.38 E-value=0.062 Score=47.65 Aligned_cols=34 Identities=29% Similarity=0.338 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..++|.|||+|..|.+.|..|++.|++|+++++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 4568999999999999999999999999999875
No 379
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=91.37 E-value=0.18 Score=53.16 Aligned_cols=34 Identities=32% Similarity=0.338 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+|.|||+|..|...|..|++.|++|+++|.+.
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 4579999999999999999999999999999753
No 380
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.31 E-value=0.18 Score=47.50 Aligned_cols=34 Identities=21% Similarity=0.114 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC-CCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g-~~V~llEa~~ 90 (529)
.++|.|||.|..|...|..|++.| ++|++++++.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 468999999999999999999999 9999999864
No 381
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=91.30 E-value=0.18 Score=47.02 Aligned_cols=34 Identities=21% Similarity=0.418 Sum_probs=30.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC--CeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~~ 90 (529)
..+|+|||||..|...|+.|+..|+ +|+|+|...
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 4689999999999999999999988 899999764
No 382
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=91.29 E-value=0.14 Score=49.43 Aligned_cols=31 Identities=23% Similarity=0.282 Sum_probs=29.4
Q ss_pred eEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 59 dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
+|.|||+|..|.+.|..|++.|++|++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 8999999999999999999999999999875
No 383
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=91.19 E-value=0.23 Score=46.65 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-CeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~ 90 (529)
..+|+|||+|..|.+.|+.|+..|. +|+++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 4689999999999999999999887 999999754
No 384
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.18 E-value=0.17 Score=47.53 Aligned_cols=34 Identities=26% Similarity=0.260 Sum_probs=30.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~ 89 (529)
..++|.|||.|..|...|..|++.|+ +|++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 45789999999999999999999999 99999975
No 385
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.17 E-value=0.22 Score=47.97 Aligned_cols=34 Identities=32% Similarity=0.509 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
...|+|+|+|..|+.+|..|+..|.+|++++++.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4789999999999999999999999999999753
No 386
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.17 E-value=0.18 Score=50.48 Aligned_cols=34 Identities=26% Similarity=0.299 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHC--CCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~--g~~V~llEa~~ 90 (529)
.++|.|||.|..|+..|..|++. |++|++++.+.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 46899999999999999999998 78999999753
No 387
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.12 E-value=0.17 Score=46.45 Aligned_cols=34 Identities=26% Similarity=0.189 Sum_probs=31.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..+.++|+|+|-+|.++|+.|++.|.+|+|+.++
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 3468999999999999999999999999999875
No 388
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=91.12 E-value=0.17 Score=47.41 Aligned_cols=32 Identities=28% Similarity=0.394 Sum_probs=29.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCC--CCeEEEecc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAG--HKPLLLEAR 89 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g--~~V~llEa~ 89 (529)
++|+|||+|..|.+.|..|++.| .+|+++|.+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 47999999999999999999998 689999975
No 389
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.10 E-value=0.28 Score=46.13 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+|.|||+|..|...|..|++.|++|++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999998753
No 390
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=91.08 E-value=0.2 Score=47.98 Aligned_cols=40 Identities=28% Similarity=0.432 Sum_probs=34.9
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCC---CeEEEeccc-cCCce
Q 009678 56 KPLKVVIAGA-GLAGLSTAKYLADAGH---KPLLLEARD-VLGGK 95 (529)
Q Consensus 56 ~~~dVvIIGa-GiaGlsaA~~L~~~g~---~V~llEa~~-~~GG~ 95 (529)
...+|+|||| |.+|+.|+..+...|. +|+++|.+. .-||.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 4679999999 9999999999999997 999999976 44554
No 391
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.00 E-value=0.26 Score=45.41 Aligned_cols=34 Identities=35% Similarity=0.443 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
.++|+|.|+|..|...+..|+++|++|+++.++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3579999999999999999999999999998753
No 392
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.98 E-value=0.21 Score=46.96 Aligned_cols=33 Identities=30% Similarity=0.418 Sum_probs=29.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC--CeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~ 89 (529)
..+|+|||+|..|.+.|+.|+..|+ +|+++|..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 4689999999999999999999887 89999974
No 393
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.94 E-value=0.19 Score=49.86 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
.+.|+|||+|-+|...|..|.+.|.+|+|++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 568999999999999999999999999999974
No 394
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=90.90 E-value=0.14 Score=48.16 Aligned_cols=32 Identities=25% Similarity=0.303 Sum_probs=29.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHC-----C-CCeEEEec
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADA-----G-HKPLLLEA 88 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~-----g-~~V~llEa 88 (529)
.++|.|||+|..|.+.|..|++. | ++|+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 35899999999999999999998 9 99999986
No 395
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.89 E-value=0.21 Score=46.02 Aligned_cols=34 Identities=15% Similarity=0.135 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
.++|+|+|||..|...+..|.++|++|+++.++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 4689999999999999999999999999998754
No 396
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.86 E-value=0.22 Score=46.28 Aligned_cols=34 Identities=12% Similarity=0.105 Sum_probs=30.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~ 89 (529)
....|+|||+|-+|.++|+.|++.|. +|+|+.+.
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 35689999999999999999999997 89999875
No 397
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.78 E-value=0.26 Score=43.22 Aligned_cols=32 Identities=28% Similarity=0.375 Sum_probs=29.2
Q ss_pred CeEEEECC-ChHHHHHHHHHHHCCCCeEEEecc
Q 009678 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 58 ~dVvIIGa-GiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
++|+|+|| |..|...+..|+++|++|+++.++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 36999996 999999999999999999999875
No 398
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=90.71 E-value=0.24 Score=45.62 Aligned_cols=32 Identities=31% Similarity=0.428 Sum_probs=29.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
++|.|||+|..|.+.|..|.+.|++|++++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 36999999999999999999999999999864
No 399
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=90.71 E-value=0.21 Score=46.68 Aligned_cols=33 Identities=27% Similarity=0.519 Sum_probs=29.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--CeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~~ 90 (529)
++|+|||+|..|.+.|+.|+..|. +|+++|...
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 479999999999999999999886 899999754
No 400
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=90.66 E-value=0.22 Score=50.19 Aligned_cols=36 Identities=22% Similarity=0.212 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHH----CCCCeEEEeccccC
Q 009678 57 PLKVVIAGAGLAGLSTAKYLAD----AGHKPLLLEARDVL 92 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~----~g~~V~llEa~~~~ 92 (529)
..+|+|||||.+|+-+|..|++ .|.+|+++++.+..
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~ 219 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGN 219 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccc
Confidence 4689999999999999999987 37899999987543
No 401
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=90.65 E-value=0.29 Score=46.11 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=30.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--CeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~ 89 (529)
...+|+|||+|..|.++|+.|+..|. +|+|+|..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 46799999999999999999999887 89999974
No 402
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=90.64 E-value=0.26 Score=45.83 Aligned_cols=34 Identities=35% Similarity=0.443 Sum_probs=30.9
Q ss_pred CCeEEEEC-CChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAG-AGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIG-aGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+|.||| +|..|.+.|..|++.|++|++++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 45799999 99999999999999999999998754
No 403
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=90.62 E-value=0.21 Score=45.43 Aligned_cols=32 Identities=19% Similarity=0.243 Sum_probs=29.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCC-CCeEEEecc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAG-HKPLLLEAR 89 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g-~~V~llEa~ 89 (529)
++|.|||+|..|.+.|..|++.| ++|++++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 36999999999999999999999 999999875
No 404
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=90.62 E-value=0.19 Score=47.81 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=29.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
...+|+|||+|.+|+-+|..|++.| +|++++++
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~ 194 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQH 194 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECC
Confidence 3568999999999999999999988 69999875
No 405
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.55 E-value=0.25 Score=46.30 Aligned_cols=35 Identities=31% Similarity=0.336 Sum_probs=31.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--CeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~~ 90 (529)
...+|.|||.|..|.+.|..|++.|+ +|++++++.
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 34689999999999999999999999 899998753
No 406
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.53 E-value=0.28 Score=47.41 Aligned_cols=35 Identities=31% Similarity=0.489 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
....|+|||+|..|+.+|..|+..|.+|++++.+.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 45689999999999999999999999999999753
No 407
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=90.45 E-value=0.28 Score=43.19 Aligned_cols=32 Identities=28% Similarity=0.418 Sum_probs=29.3
Q ss_pred CeEEEECC-ChHHHHHHHHHHHCCCCeEEEecc
Q 009678 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 58 ~dVvIIGa-GiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
++|+|+|| |..|...+..|+++|++|+++.++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 36999998 999999999999999999999764
No 408
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=90.30 E-value=0.31 Score=46.15 Aligned_cols=35 Identities=29% Similarity=0.250 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
...+|.|||.|..|-+.|..|.+.|++|++++++.
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34579999999999999999999999999998753
No 409
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.28 E-value=0.22 Score=49.75 Aligned_cols=35 Identities=11% Similarity=0.199 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
.+++|.|||.|..|.+.|..|++.|++|++++++.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 45689999999999999999999999999998753
No 410
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=90.25 E-value=0.27 Score=48.93 Aligned_cols=35 Identities=11% Similarity=0.165 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..++|.|||.|..|...|..|++.|++|++++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999864
No 411
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=90.17 E-value=0.33 Score=49.55 Aligned_cols=58 Identities=9% Similarity=0.013 Sum_probs=43.2
Q ss_pred HHHHHHHHH-cCcEEEecceeeEEEecCCCCEEEEEEcC---Cc--EE---ecCEEEEccCHHHHhhh
Q 009678 276 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VI---DGDAYVFATPVDILKLQ 334 (529)
Q Consensus 276 ~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~~~~~v~~~~---G~--~i---~ad~VI~a~~~~~~~~l 334 (529)
..+.+.+.+ .+++|++++.|++|..+ ++++++|++.+ |+ ++ .+|.||+|+|+....+|
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~l 265 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRI 265 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHH
Confidence 345565655 48999999999999984 56778888765 64 34 78999999998654443
No 412
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=90.13 E-value=0.32 Score=51.20 Aligned_cols=35 Identities=23% Similarity=0.223 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
.-.+|.|||||..|...|+.+++.|++|+|+|...
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 34689999999999999999999999999999754
No 413
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=90.11 E-value=0.23 Score=52.28 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
-.+|.|||+|..|...|..|++.|++|+++|.+.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 4579999999999999999999999999999754
No 414
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.08 E-value=0.26 Score=45.77 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=29.5
Q ss_pred eEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 59 dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
+|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999998753
No 415
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=90.08 E-value=0.23 Score=45.80 Aligned_cols=35 Identities=34% Similarity=0.489 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~ 90 (529)
...+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 45799999999999999999999997 899999754
No 416
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=90.06 E-value=0.22 Score=49.67 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHC--CCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~--g~~V~llEa~~ 90 (529)
.++|.|||.|..|+..|..|++. |++|++++++.
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 36899999999999999999998 89999998753
No 417
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=90.05 E-value=0.25 Score=46.07 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=30.3
Q ss_pred CCCeEEEECCC-hHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAGAG-LAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaG-iaGlsaA~~L~~~g~~V~llEa~ 89 (529)
...+++|||+| +.|..+|..|+..|.+|++++++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 56799999999 77999999999999999998764
No 418
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=89.98 E-value=0.32 Score=48.82 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
...+|.|||.|..|...|..|++.|++|++++++.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999998754
No 419
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=89.94 E-value=0.21 Score=48.33 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCC-------CCeEEEecccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAG-------HKPLLLEARDV 91 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g-------~~V~llEa~~~ 91 (529)
++|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999987543
No 420
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=89.93 E-value=0.23 Score=48.59 Aligned_cols=35 Identities=26% Similarity=0.367 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
..+..|||.|..|+..|..|++.|++|+++|.+..
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 34789999999999999999999999999998653
No 421
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=89.92 E-value=0.28 Score=44.97 Aligned_cols=35 Identities=20% Similarity=0.098 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~ 90 (529)
...+++|||+|-+|-++|+.|++.|. +|+|+.+..
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 35689999999999999999999998 899998764
No 422
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.88 E-value=0.33 Score=45.66 Aligned_cols=36 Identities=31% Similarity=0.378 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEecccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~~ 91 (529)
...+|+|||+|-.|..+|..|++.|. +++|+|....
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 46799999999999999999999997 7999997543
No 423
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=89.85 E-value=0.35 Score=45.82 Aligned_cols=34 Identities=26% Similarity=0.254 Sum_probs=29.9
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCC--CeEEEecc
Q 009678 56 KPLKVVIAGA-GLAGLSTAKYLADAGH--KPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGa-GiaGlsaA~~L~~~g~--~V~llEa~ 89 (529)
...+|+|||+ |..|.++|+.|+..|. +|+++|..
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 4568999997 9999999999999884 89999964
No 424
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=89.84 E-value=0.27 Score=45.78 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=30.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..+|.|||+|..|...|..|++.|++|++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 468999999999999999999999999999875
No 425
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=89.81 E-value=0.31 Score=45.05 Aligned_cols=34 Identities=29% Similarity=0.442 Sum_probs=30.9
Q ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGa-GiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
.++|.|||+ |..|.+.|..|++.|++|++++++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 358999999 9999999999999999999998753
No 426
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=89.78 E-value=0.25 Score=54.60 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC-CeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~ 90 (529)
.+|+|||||.+|+-+|..|++.|. +|+|+++++
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 489999999999999999999996 899999875
No 427
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=89.78 E-value=0.3 Score=45.84 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=30.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--CeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~ 89 (529)
...+|+|||+|..|.+.|+.|+..|. +|+|+|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 45689999999999999999999887 89999974
No 428
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=89.74 E-value=0.32 Score=45.84 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=30.2
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCC--CeEEEecc
Q 009678 55 SKPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (529)
Q Consensus 55 ~~~~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~ 89 (529)
.++.+|+|||+|-.|.+.|+.|+..+. +|+|+|..
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 355799999999999999999998875 79999863
No 429
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=89.74 E-value=0.27 Score=45.78 Aligned_cols=32 Identities=28% Similarity=0.412 Sum_probs=29.9
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
++|.|||+|..|...|..|++.|++|++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 58999999999999999999999999999875
No 430
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=89.62 E-value=0.28 Score=45.01 Aligned_cols=34 Identities=26% Similarity=0.320 Sum_probs=30.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
...+|+|||+|-+|-+.|..|++.|.+|++++++
T Consensus 128 ~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 128 KEKSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 3468999999999999999999999999999875
No 431
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=89.57 E-value=0.34 Score=44.63 Aligned_cols=32 Identities=34% Similarity=0.398 Sum_probs=29.0
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--CeEEEecc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~ 89 (529)
++|.|||+|..|.+.|..|++.|+ +|++++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 479999999999999999999998 89998864
No 432
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.57 E-value=0.37 Score=44.85 Aligned_cols=35 Identities=20% Similarity=0.291 Sum_probs=31.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
....|.|||+|-.|..+|..|...|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 45689999999999999999999999999999753
No 433
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=89.56 E-value=0.3 Score=48.62 Aligned_cols=36 Identities=22% Similarity=0.398 Sum_probs=30.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC--------------------C-CCeEEEecccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADA--------------------G-HKPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~--------------------g-~~V~llEa~~~ 91 (529)
...+|+|||+|.+|+-+|..|++. | .+|+|++++..
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 356899999999999999999974 5 48999998754
No 434
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=89.55 E-value=0.18 Score=48.23 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCC-------CCeEEEecccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAG-------HKPLLLEARDV 91 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g-------~~V~llEa~~~ 91 (529)
++|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 58999999999999999999998 89999987644
No 435
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=89.45 E-value=0.4 Score=44.81 Aligned_cols=34 Identities=24% Similarity=0.191 Sum_probs=30.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~ 89 (529)
..+.++|+|+|-+|-++|+.|++.|. +|+|+.+.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 45689999999999999999999998 89999876
No 436
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=89.45 E-value=0.32 Score=48.71 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999998753
No 437
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=89.44 E-value=0.31 Score=48.68 Aligned_cols=33 Identities=24% Similarity=0.394 Sum_probs=30.4
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999998753
No 438
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=89.42 E-value=0.32 Score=43.88 Aligned_cols=35 Identities=37% Similarity=0.463 Sum_probs=31.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~ 90 (529)
...+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 35699999999999999999999997 789998753
No 439
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=89.41 E-value=0.41 Score=43.19 Aligned_cols=34 Identities=26% Similarity=0.244 Sum_probs=30.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~ 90 (529)
.. +++|||+|-+|-++++.|++.|. +|+|+.+..
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 34 89999999999999999999998 899998753
No 440
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=89.38 E-value=0.17 Score=45.17 Aligned_cols=35 Identities=29% Similarity=0.271 Sum_probs=30.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
...+|+|||+|-.|...|..|.+.|+ |+++|++..
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 45689999999999999999999999 999998643
No 441
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=89.37 E-value=0.4 Score=44.44 Aligned_cols=35 Identities=26% Similarity=0.327 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
....|.|||+|-.|..+|..|...|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 45689999999999999999999999999999753
No 442
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=89.34 E-value=0.18 Score=49.31 Aligned_cols=30 Identities=23% Similarity=0.341 Sum_probs=28.0
Q ss_pred CeEEEECCChHHHHHHHHHHHC-CCCeEEEe
Q 009678 58 LKVVIAGAGLAGLSTAKYLADA-GHKPLLLE 87 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~-g~~V~llE 87 (529)
++|+|||+|..|.+.|..|++. |++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 4899999999999999999984 99999998
No 443
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=89.31 E-value=0.36 Score=44.29 Aligned_cols=35 Identities=23% Similarity=0.237 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~ 90 (529)
...+++|||+|-+|-++|+.|++.|. +|+|+.+..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 46799999999999999999999998 899998653
No 444
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=89.29 E-value=0.3 Score=45.07 Aligned_cols=32 Identities=22% Similarity=0.182 Sum_probs=28.4
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--CeEEEecc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~ 89 (529)
++|.|||+|-.|.++|+.|+.++. +++|+|-.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~ 34 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 479999999999999999988765 79999964
No 445
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=89.26 E-value=0.42 Score=41.31 Aligned_cols=33 Identities=33% Similarity=0.406 Sum_probs=30.4
Q ss_pred CeEEEECC-ChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGa-GiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
+.|+|+|| |..|...+..|+++|++|+++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 58999998 9999999999999999999998754
No 446
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=89.25 E-value=0.41 Score=43.72 Aligned_cols=34 Identities=21% Similarity=0.234 Sum_probs=30.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~ 89 (529)
....++|+|+|-+|-++|+.|++.|. +|+|+.+.
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 46789999999999999999999996 89999764
No 447
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=89.25 E-value=0.37 Score=47.09 Aligned_cols=32 Identities=31% Similarity=0.553 Sum_probs=29.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC---CeEEEe
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH---KPLLLE 87 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~---~V~llE 87 (529)
...+|+|+|||-+|.++|+.|.+.|. +|+|++
T Consensus 185 ~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 185 SEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 45689999999999999999999997 899999
No 448
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.20 E-value=0.31 Score=44.27 Aligned_cols=35 Identities=20% Similarity=0.250 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC----CCeEEEecccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAG----HKPLLLEARDV 91 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g----~~V~llEa~~~ 91 (529)
.++|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 358999999999999999999999 79999987643
No 449
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=89.20 E-value=0.35 Score=45.54 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=30.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC----CCeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAG----HKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g----~~V~llEa~ 89 (529)
..++|.|||+|..|.+.|..|++.| ++|++++++
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPD 58 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCC
Confidence 3458999999999999999999999 799999865
No 450
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=89.15 E-value=0.42 Score=43.95 Aligned_cols=34 Identities=32% Similarity=0.248 Sum_probs=30.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~ 89 (529)
....++|+|+|-+|-++|+.|++.|. +|+|+.+.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 45689999999999999999999998 69999775
No 451
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=89.12 E-value=0.3 Score=45.14 Aligned_cols=32 Identities=28% Similarity=0.266 Sum_probs=29.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
...++|+|+|-.|.++|+.|++.| +|+++.++
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 468999999999999999999999 99999765
No 452
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=89.05 E-value=0.4 Score=44.98 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=29.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--CeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~ 89 (529)
...+|+|||+|..|.+.|+.|+..|. +|+++|..
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999988775 79999975
No 453
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=89.01 E-value=0.44 Score=42.89 Aligned_cols=33 Identities=9% Similarity=0.157 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC----CeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGH----KPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~----~V~llEa~~ 90 (529)
++|.|||+|..|.+.|..|++.|+ +|++++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 579999999999999999999998 999998753
No 454
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=88.97 E-value=0.31 Score=49.78 Aligned_cols=35 Identities=14% Similarity=0.319 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..++|+|||+|.+|+-.|..|++.+.+|+++++.+
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 45799999999999999999999999999999754
No 455
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=88.96 E-value=0.41 Score=50.49 Aligned_cols=37 Identities=22% Similarity=0.173 Sum_probs=32.9
Q ss_pred CCCeEEEEC--CChHHHHHHHHHHHCCCCeEEEeccccC
Q 009678 56 KPLKVVIAG--AGLAGLSTAKYLADAGHKPLLLEARDVL 92 (529)
Q Consensus 56 ~~~dVvIIG--aGiaGlsaA~~L~~~g~~V~llEa~~~~ 92 (529)
...+|+||| +|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l 560 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQV 560 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccc
Confidence 456899999 9999999999999999999999987553
No 456
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=88.96 E-value=0.4 Score=45.57 Aligned_cols=37 Identities=16% Similarity=0.256 Sum_probs=30.4
Q ss_pred CCCCeEEEECC-ChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 55 SKPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 55 ~~~~dVvIIGa-GiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
...+.|+|.|| |..|...+..|+++|++|+++.+...
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 35678999998 99999999999999999999987643
No 457
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=88.93 E-value=0.31 Score=45.05 Aligned_cols=31 Identities=29% Similarity=0.318 Sum_probs=28.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
++|.|||+|..|...|..|++ |++|++++++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~ 32 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRT 32 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCC
Confidence 479999999999999999999 9999999864
No 458
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=88.93 E-value=0.47 Score=43.99 Aligned_cols=32 Identities=25% Similarity=0.605 Sum_probs=29.4
Q ss_pred CeEEEECC-ChHHHHHHHHHHHCCCCeEEEecc
Q 009678 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 58 ~dVvIIGa-GiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
++|+|.|| |..|-..+.+|.++|++|+++-++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 57999998 999999999999999999999664
No 459
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.87 E-value=0.36 Score=45.32 Aligned_cols=33 Identities=27% Similarity=0.335 Sum_probs=29.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC--CeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~ 89 (529)
..+|+|||+|-.|.+.|+.|+..|. +|+++|..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4699999999999999999998874 79999864
No 460
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=88.86 E-value=0.38 Score=47.51 Aligned_cols=35 Identities=29% Similarity=0.318 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
....|+|+|+|-.|.++|..|+..|.+|++.|.+.
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45689999999999999999999999999998753
No 461
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=88.85 E-value=0.43 Score=43.80 Aligned_cols=34 Identities=24% Similarity=0.204 Sum_probs=30.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~ 89 (529)
....++|+|+|-+|-++|+.|++.|. +|+|+.+.
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 45689999999999999999999996 89999875
No 462
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=88.70 E-value=0.36 Score=43.76 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=29.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
+++|.|||+|..|...|..|++.|++|.+++++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 368999999999999999999999999999864
No 463
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=88.63 E-value=0.35 Score=44.05 Aligned_cols=30 Identities=20% Similarity=0.156 Sum_probs=27.8
Q ss_pred eEEEECCChHHHHHHHHHHHCCCCeEEEec
Q 009678 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (529)
Q Consensus 59 dVvIIGaGiaGlsaA~~L~~~g~~V~llEa 88 (529)
+|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 699999999999999999999999998764
No 464
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=88.57 E-value=0.37 Score=45.20 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=29.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--CeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~--~V~llEa~ 89 (529)
++.+|+|||+|-.|.+.|+.|+..+. +|+|+|..
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 34799999999999999999998876 79999864
No 465
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=88.49 E-value=0.29 Score=49.30 Aligned_cols=37 Identities=30% Similarity=0.397 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHHC--------------CCCeEEEeccccCCc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADA--------------GHKPLLLEARDVLGG 94 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~--------------g~~V~llEa~~~~GG 94 (529)
..++|||||++|+-.|..|++. ..+|+|+|+.+++-.
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~ 268 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLN 268 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSST
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccccc
Confidence 4799999999999999988753 358999999887544
No 466
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=88.40 E-value=0.52 Score=43.32 Aligned_cols=34 Identities=12% Similarity=0.074 Sum_probs=30.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC---CeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGH---KPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~---~V~llEa~~ 90 (529)
.++|.|||+|-.|.+.|..|++.|+ +|++++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3579999999999999999999998 899998753
No 467
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=88.34 E-value=0.37 Score=45.12 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=29.4
Q ss_pred CeEEEECC-ChHHHHHHHHHHHCC--CCeEEEeccc
Q 009678 58 LKVVIAGA-GLAGLSTAKYLADAG--HKPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGa-GiaGlsaA~~L~~~g--~~V~llEa~~ 90 (529)
++|+|||| |..|.+.|+.|+..| .+|+++|...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 37999998 999999999999887 5899999764
No 468
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=88.26 E-value=0.55 Score=43.79 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=30.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~ 89 (529)
....++|+|+|-+|-++|+.|++.|. +|+|+.+.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 45689999999999999999999998 79999875
No 469
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=88.26 E-value=0.5 Score=44.82 Aligned_cols=34 Identities=29% Similarity=0.236 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
.++|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 3579999999999999999999999999998764
No 470
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=88.26 E-value=0.32 Score=48.93 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=30.6
Q ss_pred CCCeEEEECCChHHHH-HHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLS-TAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGls-aA~~L~~~g~~V~llEa~~ 90 (529)
..++|.|||.|-+|++ +|..|.++|++|++.|.+.
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 3468999999999997 6999999999999999753
No 471
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=88.18 E-value=0.5 Score=43.34 Aligned_cols=34 Identities=12% Similarity=0.126 Sum_probs=30.6
Q ss_pred CCCeEEEECCC-hHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAGAG-LAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaG-iaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..++|+|||+| +.|..+|..|++.|..|+++.++
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 56799999999 68999999999999999999743
No 472
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=88.13 E-value=0.51 Score=43.33 Aligned_cols=34 Identities=15% Similarity=0.262 Sum_probs=30.2
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGa-GiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..++++|||. |+.|..+|..|++.|..|+++.++
T Consensus 164 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 5679999995 579999999999999999999863
No 473
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=88.03 E-value=0.54 Score=42.74 Aligned_cols=31 Identities=29% Similarity=0.349 Sum_probs=29.2
Q ss_pred eEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 59 dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
+++|||+|-.|-+.|..|.+.|.+|++++++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 8999999999999999999999999999875
No 474
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=88.03 E-value=0.45 Score=43.35 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=30.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCC-eEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~-V~llEa~~ 90 (529)
.++|.|||+|..|...|..|++.|++ |.+++++.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 35899999999999999999999998 89998753
No 475
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=87.95 E-value=0.29 Score=45.35 Aligned_cols=32 Identities=31% Similarity=0.402 Sum_probs=29.4
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
++|.|||+|..|...|..|++.|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 589999999999999999999999999998 53
No 476
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=87.83 E-value=0.44 Score=42.04 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=30.7
Q ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGa-GiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
.++|+|+|| |..|...+..|+++|++|+++.++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 468999995 9999999999999999999998864
No 477
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=87.75 E-value=0.6 Score=43.62 Aligned_cols=36 Identities=25% Similarity=0.420 Sum_probs=31.7
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCCCeEEEecccc
Q 009678 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGa-GiaGlsaA~~L~~~g~~V~llEa~~~ 91 (529)
..+.|+|.|| |..|...+..|+++|++|+++.+...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3568999999 99999999999999999999987543
No 478
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=87.75 E-value=0.6 Score=43.08 Aligned_cols=34 Identities=29% Similarity=0.429 Sum_probs=30.6
Q ss_pred CCCeEEEEC-CChHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAG-AGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIG-aGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..+.++|+| +|-.|.++|..|++.|.+|+++.++
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 346899999 9999999999999999999999875
No 479
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=87.74 E-value=0.47 Score=45.99 Aligned_cols=36 Identities=19% Similarity=0.433 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC---CeEEEecccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH---KPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~---~V~llEa~~~ 91 (529)
.+.+|+|.|||.+|+.+|..|.+.|. +|.++|+...
T Consensus 218 ~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gl 256 (487)
T 3nv9_A 218 HECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGS 256 (487)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEE
T ss_pred hhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecccc
Confidence 45789999999999999999999997 8999998743
No 480
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=87.67 E-value=0.49 Score=45.10 Aligned_cols=34 Identities=35% Similarity=0.459 Sum_probs=30.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~ 89 (529)
...+|+|||+|-.|..+|..|++.|. +++|+|..
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D 151 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGIGEIILIDND 151 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 35699999999999999999999997 79999974
No 481
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=87.60 E-value=0.48 Score=44.23 Aligned_cols=31 Identities=35% Similarity=0.473 Sum_probs=28.1
Q ss_pred eEEEECCChHHHHHHHHHHHCCC-CeEEEecc
Q 009678 59 KVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (529)
Q Consensus 59 dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~ 89 (529)
+|+|||||..|.+.|+.|+..++ +|+|+|..
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~ 32 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIART 32 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 58999999999999999998888 69999975
No 482
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=87.57 E-value=0.59 Score=44.62 Aligned_cols=34 Identities=24% Similarity=0.327 Sum_probs=30.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..+.|+|+|+|-.|..+|..|.+.|.+|++.|..
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4568999999999999999999999999998853
No 483
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=87.55 E-value=0.55 Score=42.88 Aligned_cols=33 Identities=18% Similarity=0.292 Sum_probs=29.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-CeEEEecc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~ 89 (529)
..+++|||+|-+|-++|+.|++.|. +|+|+.+.
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4689999999999999999999997 89999765
No 484
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=87.45 E-value=0.69 Score=43.59 Aligned_cols=35 Identities=20% Similarity=0.413 Sum_probs=31.1
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGa-GiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+.|+|.|| |..|...|..|+++|++|+++.+..
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4568999998 9999999999999999999998743
No 485
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=87.44 E-value=0.35 Score=47.72 Aligned_cols=52 Identities=15% Similarity=0.069 Sum_probs=38.6
Q ss_pred cchHHHHHHHHHcCcEEEecceeeEEEecCCCCEEEEEEcCC--cEEecCEEEEccCH
Q 009678 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPV 328 (529)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~v~~~~G--~~i~ad~VI~a~~~ 328 (529)
...+.+.+.++++|+++++++.|++|+. ++. .++..+| +++.+|.||+|+|.
T Consensus 201 ~~~~~l~~~l~~~GV~~~~~~~v~~v~~--~~~--~~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 201 ASKRLVEDLFAERNIDWIANVAVKAIEP--DKV--IYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp THHHHHHHHHHHTTCEEECSCEEEEECS--SEE--EEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHhCCeEEEeCceEEEEeC--Cce--EEEeeCCCceEeecceEEEeccC
Confidence 3445567778889999999999999963 332 2444444 47999999999874
No 486
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=87.44 E-value=0.56 Score=42.43 Aligned_cols=34 Identities=12% Similarity=0.130 Sum_probs=30.3
Q ss_pred CCCeEEEECCC-hHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAGAG-LAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaG-iaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..++++|||+| +.|..+|..|.+.|..|+++.++
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 56799999976 79999999999999999999753
No 487
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=87.40 E-value=0.42 Score=44.39 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=28.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+|.+||-|..|...|..|++.|++|++++++.
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3479999999999999999999999999998753
No 488
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=87.27 E-value=0.53 Score=41.29 Aligned_cols=33 Identities=24% Similarity=0.270 Sum_probs=29.9
Q ss_pred CeEEEEC-CChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 58 LKVVIAG-AGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 58 ~dVvIIG-aGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
++|+|+| +|..|...+..|+++|++|+++.++.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 3699999 79999999999999999999998864
No 489
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=87.22 E-value=0.53 Score=47.01 Aligned_cols=34 Identities=12% Similarity=0.159 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 57 ~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+|.|||+|..|...|..|++.|++|++++++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 3589999999999999999999999999998753
No 490
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=87.19 E-value=0.4 Score=45.17 Aligned_cols=35 Identities=26% Similarity=0.223 Sum_probs=29.8
Q ss_pred CCCeEEEEC-CChHHHHHHHHHHHCC--CCeEEEeccc
Q 009678 56 KPLKVVIAG-AGLAGLSTAKYLADAG--HKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIG-aGiaGlsaA~~L~~~g--~~V~llEa~~ 90 (529)
..++|+||| +|..|.+.|+.|+.+| .+|+++|...
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~ 44 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN 44 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 346899999 7999999999999988 6899998644
No 491
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=86.91 E-value=0.95 Score=42.67 Aligned_cols=34 Identities=21% Similarity=0.214 Sum_probs=30.7
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGa-GiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..+.|+|.|| |..|...+..|+++|++|+++.+.
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4568999998 999999999999999999999864
No 492
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=86.89 E-value=0.58 Score=42.62 Aligned_cols=34 Identities=24% Similarity=0.215 Sum_probs=30.3
Q ss_pred CCCeEEEECCC-hHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAGAG-LAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGaG-iaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..++++|||+| +.|..+|..|++.|..|+++.++
T Consensus 158 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 192 (288)
T 1b0a_A 158 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF 192 (288)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred CCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 56799999999 67999999999999999999643
No 493
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=86.68 E-value=0.64 Score=47.18 Aligned_cols=36 Identities=31% Similarity=0.378 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEecccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~~ 91 (529)
...+|+|||+|-.|..+|..|++.|. +++|+|....
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~V 361 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 361 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 46799999999999999999999997 7999997543
No 494
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=86.53 E-value=0.59 Score=47.34 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~ 90 (529)
...+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 326 ~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 326 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 361 (598)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 35799999999999999999999997 799998653
No 495
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=86.50 E-value=0.73 Score=41.91 Aligned_cols=34 Identities=21% Similarity=0.189 Sum_probs=30.0
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGa-GiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..++++|||. |+.|..+|..|++.|..|++..++
T Consensus 160 ~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~ 194 (286)
T 4a5o_A 160 YGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF 194 (286)
T ss_dssp TTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence 5679999995 679999999999999999999753
No 496
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=86.48 E-value=0.6 Score=45.48 Aligned_cols=35 Identities=31% Similarity=0.388 Sum_probs=31.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-CeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~-~V~llEa~~ 90 (529)
....|+|||+|-.|..+|..|...|. +|+++++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 45689999999999999999999998 899998753
No 497
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=86.46 E-value=0.77 Score=43.34 Aligned_cols=35 Identities=29% Similarity=0.352 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+.|.|||.|-.|...|..|+..|++|++++++.
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 45689999999999999999999999999999753
No 498
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=86.46 E-value=0.76 Score=43.45 Aligned_cols=35 Identities=20% Similarity=0.136 Sum_probs=31.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
..+.|.|||.|..|...|..|+..|++|+++++..
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 45689999999999999999999999999998754
No 499
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=86.43 E-value=0.73 Score=41.92 Aligned_cols=34 Identities=26% Similarity=0.349 Sum_probs=30.0
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCCCeEEEecc
Q 009678 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (529)
Q Consensus 56 ~~~dVvIIGa-GiaGlsaA~~L~~~g~~V~llEa~ 89 (529)
..++++|||+ |+.|..+|..|++.|..|++..++
T Consensus 159 ~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~ 193 (285)
T 3p2o_A 159 EGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK 193 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 5679999995 568999999999999999999764
No 500
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=86.41 E-value=0.64 Score=46.29 Aligned_cols=35 Identities=26% Similarity=0.289 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCCeEEEeccc
Q 009678 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (529)
Q Consensus 56 ~~~dVvIIGaGiaGlsaA~~L~~~g~~V~llEa~~ 90 (529)
....|+|||.|..|..+|..|...|.+|+++|...
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999753
Done!